Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:32:15 2011 Seq name: gi|296918720|gb|GG772980.1| Escherichia coli MS 110-3 genomic scaffold Scfld3, whole genome shotgun sequence Length of sequence - 9321 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 8, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1417 - 1785 175 ## EcSMS35_2272 ISL3 family transposase 2 2 Op 1 1/1.000 - CDS 2437 - 3471 883 ## COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold 3 2 Op 2 1/1.000 - CDS 3474 - 4439 693 ## COG3238 Uncharacterized protein conserved in bacteria - Term 4453 - 4486 4.7 4 3 Op 1 2/0.000 - CDS 4493 - 5251 654 ## COG5426 Uncharacterized membrane protein 5 3 Op 2 . - CDS 5265 - 6479 391 ## COG0524 Sugar kinases, ribokinase family - Prom 6566 - 6625 6.4 6 4 Tu 1 . - CDS 6675 - 6791 79 ## COG3436 Transposase and inactivated derivatives - Prom 6811 - 6870 2.9 + Prom 6764 - 6823 3.0 7 5 Tu 1 . + CDS 6855 - 7988 292 ## COG3547 Transposase and inactivated derivatives - Term 8124 - 8160 -0.6 8 6 Tu 1 . - CDS 8217 - 8414 74 ## UTI89_C2243 hypothetical protein 9 7 Tu 1 . + CDS 8569 - 8745 56 ## COG3328 Transposase and inactivated derivatives + Term 8789 - 8845 17.2 - Term 8776 - 8832 17.2 10 8 Tu 1 . - CDS 8928 - 9185 365 ## UTI89_C2242 hypothetical protein - Prom 9248 - 9307 2.4 Predicted protein(s) >gi|296918720|gb|GG772980.1| GENE 1 1417 - 1785 175 122 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_2272 NR:ns ## KEGG: EcSMS35_2272 # Name: not_defined # Def: ISL3 family transposase # Organism: E.coli_SECEC # Pathway: not_defined # 1 122 338 459 539 224 96.0 9e-58 MSTRPPKRGLLDPWREWLKEQRESGNYNASRIWREMVAQGGTGSETIVRDTVAKWRKGWN PPVTTAARLPSVSRVSRWLMPWRIIRGEENYASRFISLMCEKEPELKIAQQLVLEFYRIL KT >gi|296918720|gb|GG772980.1| GENE 2 2437 - 3471 883 344 aa, chain - ## HITS:1 COG:STM3550 KEGG:ns NR:ns ## COG: STM3550 COG1735 # Protein_GI_number: 16766836 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Salmonella typhimurium LT2 # 1 344 1 344 344 619 86.0 1e-177 MKDYLQTVTGPVAREDMGLTLPHEHLFNDLSSVVDAPCYPFSQRLVDKKVTAEIQWALKH DPYCCADNMDRKPIEDVIFEINNFISLGGRTIVDATGSESIGRDAQALREVALKTGLNIV ASSGPYLEKFESQRIHKTVDELAATIDKELNQGIGDTDIRAGMIGEIGVSPTFTEAEHNS LRAASLAQINNPHVAMNIHMPGWLRRGDEVLDIVLGEMGVSPNKVSLAHSDPSGKDVAYQ RKMLDKGVWLEFDMIGLDITFPKEGIAPGVQETADAVAHLIELGYADQLVLSHDVFLKQM WAKNGGNGWGFVPDVFLAYLAERGVDKTILKKLCIDNPGRLLTA >gi|296918720|gb|GG772980.1| GENE 3 3474 - 4439 693 321 aa, chain - ## HITS:1 COG:STM3549 KEGG:ns NR:ns ## COG: STM3549 COG3238 # Protein_GI_number: 16766835 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 321 1 321 323 527 93.0 1e-150 MKKNKYSTPLWMLATILAGMLSPMQSAVNGQLGHWLQDGNACAVISFASGLVVMFFIIMA RKETRQQFAAIPSLIKNRKVPLWNWFAGLCGAMVVFSEGASASALGVATFQTALISALLL SGLLCDRFGIGVDEKKYFTPYRIIGALFAVIATIFVVSPQWHSTSFILLAILPFLAGLLA GWQPAGNAKVAEATGSMLVSITWNFIVGFCVLGTALAIRVALGHVTVQLPDVWWMYLGGP LGLMSIGLMAILVRGLGLLMLGVASTAGQLLGSVLIDVLIPSLGNTVYLVTIIGTLFALV GAIVTTIPEYRTSKTMKKMEV >gi|296918720|gb|GG772980.1| GENE 4 4493 - 5251 654 252 aa, chain - ## HITS:1 COG:STM3548 KEGG:ns NR:ns ## COG: STM3548 COG5426 # Protein_GI_number: 16766834 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Salmonella typhimurium LT2 # 1 252 1 252 253 449 81.0 1e-126 MNNTKKSLKVLFIGESWHIHMIHSKGYDSFTSSKYEEGATWLLQCLKNSQVDVTYMPAHT VQIAFPEDVAQLEQYDAIVISDIGSNTFLLQNDTFYQLRIKPNALELIKEYVNNGGGLLM IGGYLSFMGIEAKANYKNTVLADVLPVTMLDGDDRVEKPEGVIAQPSQPEHPVIKGFSEY PFFLGYNRAIAKENAEVVLTINNDPLLVFGNYHNGKIACFMSDCSPHWGTQQFMSWPFYT ALWVNILTHIAR >gi|296918720|gb|GG772980.1| GENE 5 5265 - 6479 391 404 aa, chain - ## HITS:1 COG:STM3547_2 KEGG:ns NR:ns ## COG: STM3547_2 COG0524 # Protein_GI_number: 16766833 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 94 404 2 312 312 496 82.0 1e-140 MKFERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFIVLD SLDTIAKNEIAYALENYDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLLA SNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKET QTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQA ITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEAI HNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSLE SALCYASAFASLAVETSNASDMPEHESVIHRIQSIHYQQTIFTH >gi|296918720|gb|GG772980.1| GENE 6 6675 - 6791 79 38 aa, chain - ## HITS:1 COG:ECs1339 KEGG:ns NR:ns ## COG: ECs1339 COG3436 # Protein_GI_number: 15830593 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 38 477 518 537 72 83.0 1e-13 MFFGGERSALLYGLIGTCLLNDIDPEAYLRHILSVLPE >gi|296918720|gb|GG772980.1| GENE 7 6855 - 7988 292 377 aa, chain + ## HITS:1 COG:mll9195 KEGG:ns NR:ns ## COG: mll9195 COG3547 # Protein_GI_number: 13488118 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 8 364 7 363 369 338 48.0 1e-92 MHSENIAAYVGLDVHKETLAVAIAAPERLGEVRYYGTINNEAQAVRRLFQKLQGLYGNIL SCYEAGPCGFGLYHQLTAMNIKCQVIAPSRIPKSPTDRIKNDHRDAISLARLLRAGELTP VWIPDLTHEAMRDLIRARAAAKRDSRVARQRILSMLLRTDKHYAGKHWTGKHRTWLANQS FSQPSQQIAFQHYCQSLEQIEDRILQLDQEISRLLPEWSLCNLVCQLQALKGVGQLIAIT LVAELGDFSRFSNPKQLMAFLGLVPGEYSSGNSIRPRGITKVGNSELRRLLYEAAWSYRT PAKVGAWLIYYRPDSVTQYSKDIAWKAQQRLCSRYRSLTAKGKKSQVAITAVARELTGFM WDIALAAQSSFSQQKQN >gi|296918720|gb|GG772980.1| GENE 8 8217 - 8414 74 65 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2243 NR:ns ## KEGG: UTI89_C2243 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 65 42 106 106 136 100.0 2e-31 MHGGEKCHAIQKSRLGEWFSCVLNQWGALCYYSVDGQAEADIMPRKKPFVPSVSEIKTLM TFVKY >gi|296918720|gb|GG772980.1| GENE 9 8569 - 8745 56 58 aa, chain + ## HITS:1 COG:Z1827 KEGG:ns NR:ns ## COG: Z1827 COG3328 # Protein_GI_number: 15801298 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 48 1 48 117 68 72.0 3e-12 MVRRLHFTGSKLTIICSLMTTLKTCIRTITYLSDIGCLEIQGACLERYKDTFTPVMIK >gi|296918720|gb|GG772980.1| GENE 10 8928 - 9185 365 85 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2242 NR:ns ## KEGG: UTI89_C2242 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 85 189 273 273 167 97.0 1e-40 MISVRLKDPRGAGYTQLWLSRGTGAYTYDWTPETRYGSMKSISLQRIQPLTEQLNLGLTA GKVWYDTPTDDYNGLQLAAHLIWKF Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:33:17 2011 Seq name: gi|296918719|gb|GG772981.1| Escherichia coli MS 110-3 genomic scaffold Scfld8, whole genome shotgun sequence Length of sequence - 172153 bp Number of predicted genes - 170, with homology - 170 Number of transcription units - 99, operones - 41 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 25 - 84 4.4 1 1 Tu 1 . + CDS 271 - 702 79 ## COG0500 SAM-dependent methyltransferases - Term 690 - 746 3.0 2 2 Tu 1 . - CDS 757 - 990 75 ## COG5525 Bacteriophage tail assembly protein - Prom 1228 - 1287 2.7 + Prom 826 - 885 2.6 3 3 Tu 1 . + CDS 1120 - 1419 125 ## COG0582 Integrase - TRNA 1755 - 1831 89.4 # Arg TCT 0 0 4 4 Tu 1 . - CDS 1864 - 2052 70 ## ECS88_0530 hypothetical protein + Prom 1958 - 2017 3.1 5 5 Op 1 2/0.744 + CDS 2102 - 2968 920 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 6 5 Op 2 1/0.860 + CDS 2970 - 3182 310 ## COG2501 Uncharacterized conserved protein + Term 3239 - 3277 12.1 7 6 Tu 1 . + CDS 3341 - 3862 416 ## COG1988 Predicted membrane-bound metal-dependent hydrolases - Term 3851 - 3886 7.4 8 7 Tu 1 . - CDS 3898 - 5283 1745 ## COG0215 Cysteinyl-tRNA synthetase - Prom 5318 - 5377 3.6 + Prom 5277 - 5336 4.3 9 8 Tu 1 . + CDS 5457 - 5951 572 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 6013 - 6058 14.2 + Prom 6000 - 6059 27.8 10 9 Op 1 . + CDS 6159 - 6707 530 ## COG2908 Uncharacterized protein conserved in bacteria + Prom 6718 - 6777 3.4 11 9 Op 2 . + CDS 6818 - 7147 211 ## ECS88_0523 hypothetical protein 12 9 Op 3 29/0.000 + CDS 7243 - 7752 620 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 13 9 Op 4 . + CDS 7749 - 8816 1158 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 14 10 Op 1 . - CDS 8969 - 9862 1026 ## COG0549 Carbamate kinase 15 10 Op 2 . - CDS 9859 - 10674 583 ## ECS88_0519 hypothetical protein 16 10 Op 3 . - CDS 10685 - 11944 1304 ## ECS88_0518 hypothetical protein 17 10 Op 4 . - CDS 11954 - 13621 1834 ## COG0074 Succinyl-CoA synthetase, alpha subunit - Prom 13799 - 13858 4.9 + Prom 13831 - 13890 5.9 18 11 Op 1 4/0.512 + CDS 13938 - 14987 1007 ## COG2055 Malate/L-lactate dehydrogenases 19 11 Op 2 4/0.512 + CDS 15009 - 16244 1070 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 20 11 Op 3 . + CDS 16255 - 17040 892 ## COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization + Term 17219 - 17253 0.3 - Term 17206 - 17239 3.1 21 12 Op 1 2/0.744 - CDS 17256 - 18401 1134 ## COG1929 Glycerate kinase 22 12 Op 2 2/0.744 - CDS 18423 - 19724 984 ## COG2233 Xanthine/uracil permeases - Term 19734 - 19766 3.0 23 13 Op 1 2/0.744 - CDS 19780 - 21141 1443 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 24 13 Op 2 . - CDS 21201 - 22655 1330 ## COG1953 Cytosine/uracil/thiamine/allantoin permeases - Prom 22710 - 22769 8.1 25 14 Op 1 8/0.070 - CDS 22825 - 23703 1114 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 26 14 Op 2 8/0.070 - CDS 23803 - 24579 754 ## COG3622 Hydroxypyruvate isomerase 27 14 Op 3 4/0.512 - CDS 24592 - 26373 2050 ## COG3960 Glyoxylate carboligase - Prom 26394 - 26453 4.7 - Term 26420 - 26450 3.0 28 15 Tu 1 4/0.512 - CDS 26463 - 27233 702 ## COG1414 Transcriptional regulator - Prom 27276 - 27335 2.2 29 16 Tu 1 . - CDS 27356 - 27838 509 ## COG3194 Ureidoglycolate hydrolase - Prom 27900 - 27959 4.3 + Prom 27945 - 28004 5.6 30 17 Op 1 4/0.512 + CDS 28068 - 28994 639 ## COG0583 Transcriptional regulator + Term 29005 - 29054 2.7 31 17 Op 2 . + CDS 29063 - 30157 1176 ## COG2603 Predicted ATPase 32 18 Op 1 11/0.047 - CDS 30216 - 32630 2277 ## COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 33 18 Op 2 . - CDS 32627 - 33313 315 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 33434 - 33493 2.7 + Prom 32970 - 33029 1.9 34 19 Op 1 5/0.209 + CDS 33251 - 33907 583 ## COG2755 Lysophospholipase L1 and related esterases 35 19 Op 2 3/0.605 + CDS 33897 - 34706 225 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 36 19 Op 3 . + CDS 34767 - 35621 1278 ## COG3118 Thioredoxin domain-containing protein + Term 35656 - 35699 9.1 - Term 35633 - 35683 12.8 37 20 Op 1 4/0.512 - CDS 35684 - 36463 839 ## COG0390 ABC-type uncharacterized transport system, permease component 38 20 Op 2 . - CDS 36450 - 37127 179 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 37154 - 37213 3.8 + Prom 37118 - 37177 4.0 39 21 Op 1 26/0.000 + CDS 37273 - 38190 1349 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 40 21 Op 2 . + CDS 38187 - 38645 446 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 41 22 Tu 1 . - CDS 38748 - 39110 356 ## EcSMS35_0536 hypothetical protein - Prom 39281 - 39340 6.8 + Prom 39236 - 39295 8.2 42 23 Op 1 . + CDS 39477 - 40493 752 ## COG5295 Autotransporter adhesin + Prom 40503 - 40562 3.4 43 23 Op 2 . + CDS 40582 - 41001 409 ## ECS88_0490 hypothetical protein 44 23 Op 3 . + CDS 40998 - 41201 221 ## ECS88_0489 hypothetical protein - Term 41148 - 41188 -0.9 45 24 Tu 1 . - CDS 41205 - 41612 456 ## COG0789 Predicted transcriptional regulators - Prom 41652 - 41711 3.8 46 25 Op 1 4/0.512 - CDS 41737 - 43026 1381 ## COG0531 Amino acid transporters 47 25 Op 2 . - CDS 43032 - 43964 900 ## COG2066 Glutaminase - Prom 44046 - 44105 3.4 + Prom 43924 - 43983 7.2 48 26 Tu 1 . + CDS 44226 - 46730 2786 ## COG2217 Cation transport ATPase + Term 46734 - 46793 4.9 49 27 Op 1 6/0.070 - CDS 46788 - 47129 368 ## COG3093 Plasmid maintenance system antidote protein 50 27 Op 2 . - CDS 47165 - 47467 61 ## COG3549 Plasmid maintenance system killer protein - Prom 47493 - 47552 3.1 + Prom 47400 - 47459 4.4 51 28 Tu 1 5/0.209 + CDS 47600 - 48394 734 ## COG3735 Uncharacterized protein conserved in bacteria + Term 48447 - 48495 -0.1 + Prom 48398 - 48457 7.6 52 29 Tu 1 . + CDS 48598 - 49077 699 ## COG2606 Uncharacterized conserved protein 53 30 Op 1 . + CDS 49245 - 49901 207 ## UTI89_C0510 hypothetical protein 54 30 Op 2 . + CDS 49898 - 50401 289 ## ECS88_0478 hypothetical protein + Term 50403 - 50446 2.0 - Term 50391 - 50427 8.0 55 31 Tu 1 . - CDS 50439 - 52091 1802 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 52136 - 52195 2.6 + Prom 52034 - 52093 4.0 56 32 Tu 1 . + CDS 52309 - 53529 1151 ## COG0477 Permeases of the major facilitator superfamily + Term 53536 - 53575 8.0 + Prom 53607 - 53666 4.8 57 33 Tu 1 . + CDS 53768 - 55444 497 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 + Term 55493 - 55558 3.1 - Term 55479 - 55544 3.1 58 34 Tu 1 . - CDS 55574 - 56878 1481 ## COG0524 Sugar kinases, ribokinase family - Prom 56971 - 57030 1.8 + Prom 56850 - 56909 2.7 59 35 Tu 1 . + CDS 57030 - 57989 697 ## COG0657 Esterase/lipase + Term 58024 - 58069 8.0 - Term 57925 - 57961 2.0 60 36 Op 1 . - CDS 57986 - 58948 972 ## COG0276 Protoheme ferro-lyase (ferrochelatase) - Prom 58973 - 59032 3.9 61 36 Op 2 . - CDS 59080 - 59724 937 ## COG0563 Adenylate kinase and related kinases - Prom 59861 - 59920 28.1 - Term 59860 - 59898 7.1 62 37 Tu 1 . - CDS 59927 - 61801 2666 ## COG0326 Molecular chaperone, HSP90 family - Prom 61823 - 61882 3.3 - Term 61864 - 61909 9.0 63 38 Op 1 23/0.000 - CDS 61911 - 62516 567 ## COG0353 Recombinational DNA repair protein (RecF pathway) 64 38 Op 2 30/0.000 - CDS 62516 - 62845 227 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 - Term 62868 - 62896 1.6 65 38 Op 3 8/0.070 - CDS 62898 - 64829 1837 ## COG2812 DNA polymerase III, gamma/tau subunits - Prom 64866 - 64925 2.5 - Term 64870 - 64906 2.2 66 39 Tu 1 . - CDS 64958 - 65509 820 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 67 40 Tu 1 . - CDS 65662 - 66039 324 ## COG2832 Uncharacterized protein conserved in bacteria - Prom 66067 - 66126 4.0 + Prom 66026 - 66085 6.3 68 41 Op 1 . + CDS 66109 - 66636 524 ## COG3923 Primosomal replication protein N'' 69 41 Op 2 . + CDS 66650 - 66811 197 ## ECS88_0463 hypothetical protein - Term 66853 - 66889 2.4 70 42 Tu 1 . - CDS 67023 - 70385 3647 ## COG3264 Small-conductance mechanosensitive channel - Prom 70431 - 70490 3.6 - Term 70470 - 70499 1.4 71 43 Tu 1 . - CDS 70513 - 71160 477 ## COG1309 Transcriptional regulator - Prom 71221 - 71280 5.0 + Prom 71164 - 71223 3.6 72 44 Op 1 27/0.000 + CDS 71302 - 72495 1250 ## COG0845 Membrane-fusion protein 73 44 Op 2 . + CDS 72518 - 75667 3394 ## COG0841 Cation/multidrug efflux pump + Term 75687 - 75714 1.5 74 45 Op 1 . + CDS 76212 - 76586 259 ## ECIAI39_0213 hypothetical protein 75 45 Op 2 . + CDS 76612 - 76830 179 ## APECO1_1553 Hha protein + Term 76926 - 76966 -0.5 + Prom 76832 - 76891 5.3 76 46 Tu 1 . + CDS 77004 - 77555 381 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Prom 77576 - 77635 3.4 77 47 Tu 1 . + CDS 77671 - 78141 489 ## G2583_0570 hypothetical protein + Prom 78220 - 78279 4.6 78 48 Tu 1 . + CDS 78299 - 79855 1183 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains - Term 79743 - 79780 2.2 79 49 Tu 1 . - CDS 79897 - 80250 448 ## COG5507 Uncharacterized conserved protein - 5S_RRNA 80361 - 80474 100.0 # ECU82664 [D:55896..56009] # 4.5S ribosomal RNA # Escherichia coli # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. 80 50 Tu 1 . + CDS 80629 - 80940 293 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase - Term 80929 - 80960 4.1 81 51 Tu 1 . - CDS 80971 - 81543 486 ## COG3126 Uncharacterized protein conserved in bacteria - Prom 81602 - 81661 2.6 + Prom 81662 - 81721 2.9 82 52 Tu 1 . + CDS 81761 - 82621 765 ## COG1946 Acyl-CoA thioesterase + Term 82627 - 82666 5.2 - Term 82617 - 82651 3.3 83 53 Op 1 24/0.000 - CDS 82670 - 83956 1537 ## COG0004 Ammonia permease 84 53 Op 2 4/0.512 - CDS 83986 - 84324 454 ## COG0347 Nitrogen regulatory protein PII - Prom 84422 - 84481 4.8 - Term 84433 - 84468 4.5 85 54 Op 1 35/0.000 - CDS 84505 - 86286 218 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 86 54 Op 2 3/0.605 - CDS 86279 - 88051 199 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 87 54 Op 3 1/0.860 - CDS 88081 - 88539 439 ## COG1522 Transcriptional regulators - Prom 88597 - 88656 51.5 88 55 Tu 1 . - CDS 88674 - 89492 710 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 89523 - 89582 2.6 + Prom 89495 - 89554 2.2 89 56 Op 1 5/0.209 + CDS 89577 - 91292 1032 ## COG4533 ABC-type uncharacterized transport system, periplasmic component 90 56 Op 2 . + CDS 91357 - 92052 714 ## COG0603 Predicted PP-loop superfamily ATPase 91 57 Tu 1 . - CDS 92104 - 92502 365 ## COG0824 Predicted thioesterase - Prom 92545 - 92604 2.7 92 58 Tu 1 . - CDS 92608 - 92979 565 ## COG1555 DNA uptake protein and related DNA-binding proteins - Prom 93026 - 93085 2.3 - Term 93049 - 93086 7.1 93 59 Tu 1 . - CDS 93130 - 95001 2257 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Prom 95123 - 95182 3.5 - Term 95126 - 95157 2.5 94 60 Op 1 16/0.000 - CDS 95193 - 95465 439 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 95521 - 95580 3.4 - Term 95600 - 95641 8.5 95 60 Op 2 18/0.000 - CDS 95674 - 98028 2971 ## COG0466 ATP-dependent Lon protease, bacterial type - Prom 98138 - 98197 4.5 - Term 98152 - 98182 2.7 96 60 Op 3 24/0.000 - CDS 98216 - 99490 238 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 97 60 Op 4 29/0.000 - CDS 99616 - 100239 683 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 100273 - 100332 5.2 - Term 100414 - 100451 6.0 98 60 Op 5 2/0.744 - CDS 100494 - 101783 1783 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 101922 - 101981 6.0 - Term 102036 - 102074 6.2 99 61 Tu 1 . - CDS 102127 - 102444 257 ## COG0271 Stress-induced morphogen (activity unknown) - Prom 102611 - 102670 4.9 + Prom 102648 - 102707 3.4 100 62 Op 1 1/0.860 + CDS 102749 - 103327 655 ## COG3056 Uncharacterized lipoprotein 101 62 Op 2 5/0.209 + CDS 103371 - 104846 1358 ## COG0477 Permeases of the major facilitator superfamily + Prom 105028 - 105087 11.0 102 63 Op 1 25/0.000 + CDS 105305 - 106261 885 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 103 63 Op 2 20/0.000 + CDS 106283 - 108274 2004 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 104 63 Op 3 16/0.000 + CDS 108264 - 108878 688 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 105 63 Op 4 7/0.070 + CDS 108932 - 109207 257 ## COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 106 63 Op 5 2/0.744 + CDS 109219 - 110109 857 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) + Term 110130 - 110156 -1.0 + Prom 110178 - 110237 3.2 107 64 Tu 1 . + CDS 110258 - 111622 1497 ## COG0477 Permeases of the major facilitator superfamily + Term 111745 - 111772 -0.8 - Term 111567 - 111615 3.2 108 65 Tu 1 . - CDS 111750 - 112241 779 ## COG1666 Uncharacterized protein conserved in bacteria - Prom 112267 - 112326 2.8 + Prom 112227 - 112286 2.5 109 66 Op 1 4/0.512 + CDS 112409 - 113320 849 ## COG1893 Ketopantoate reductase 110 66 Op 2 . + CDS 113283 - 113873 670 ## COG0693 Putative intracellular protease/amidase - Term 113726 - 113764 3.1 111 67 Tu 1 . - CDS 113927 - 115375 1580 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase - Prom 115570 - 115629 3.5 + Prom 115319 - 115378 3.1 112 68 Op 1 22/0.000 + CDS 115581 - 115823 377 ## COG1722 Exonuclease VII small subunit 113 68 Op 2 13/0.023 + CDS 115823 - 116722 852 ## COG0142 Geranylgeranyl pyrophosphate synthase 114 68 Op 3 3/0.605 + CDS 116747 - 118609 2022 ## COG1154 Deoxyxylulose-5-phosphate synthase 115 68 Op 4 . + CDS 118664 - 119638 999 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 116 69 Op 1 12/0.023 - CDS 119692 - 120210 535 ## COG1267 Phosphatidylglycerophosphatase A and related proteins 117 69 Op 2 11/0.047 - CDS 120188 - 121165 1087 ## COG0611 Thiamine monophosphate kinase 118 69 Op 3 17/0.000 - CDS 121243 - 121662 520 ## COG0781 Transcription termination factor 119 69 Op 4 6/0.070 - CDS 121682 - 122152 631 ## COG0054 Riboflavin synthase beta-chain 120 69 Op 5 14/0.023 - CDS 122241 - 123344 914 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 121 69 Op 6 . - CDS 123348 - 123797 416 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 123824 - 123883 4.9 + Prom 123864 - 123923 3.1 122 70 Tu 1 . + CDS 123948 - 124487 418 ## Z0513 hypothetical protein + Prom 124648 - 124707 7.7 123 71 Tu 1 . + CDS 124785 - 125669 1200 ## COG3248 Nucleoside-binding outer membrane protein + Term 125671 - 125722 7.1 124 72 Tu 1 . - CDS 125707 - 126054 432 ## APECO1_1600 hypothetical protein - Prom 126084 - 126143 4.5 - Term 126123 - 126164 8.1 125 73 Op 1 31/0.000 - CDS 126184 - 127155 1131 ## COG0341 Preprotein translocase subunit SecF 126 73 Op 2 25/0.000 - CDS 127166 - 128980 2083 ## COG0342 Preprotein translocase subunit SecD 127 73 Op 3 15/0.000 - CDS 129041 - 129373 489 ## COG1862 Preprotein translocase subunit YajC 128 73 Op 4 17/0.000 - CDS 129396 - 130523 1048 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 129 73 Op 5 . - CDS 130578 - 131648 1039 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 131744 - 131803 4.2 + Prom 131686 - 131745 4.6 130 74 Tu 1 . + CDS 131867 - 132448 385 ## COG3124 Uncharacterized protein conserved in bacteria 131 75 Tu 1 . - CDS 132453 - 134267 1514 ## COG0366 Glycosidases 132 76 Op 1 5/0.209 - CDS 134426 - 135799 1634 ## COG1113 Gamma-aminobutyrate permease and related permeases - Term 135818 - 135852 2.3 133 76 Op 2 4/0.512 - CDS 135875 - 137194 1423 ## COG1114 Branched-chain amino acid permeases - Prom 137365 - 137424 5.2 - Term 137539 - 137574 5.1 134 77 Op 1 40/0.000 - CDS 137601 - 138896 1114 ## COG0642 Signal transduction histidine kinase - Term 138913 - 138952 3.3 135 77 Op 2 . - CDS 138954 - 139643 651 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 139667 - 139726 5.2 + Prom 139643 - 139702 3.8 136 78 Op 1 28/0.000 + CDS 139833 - 141035 864 ## COG0420 DNA repair exonuclease 137 78 Op 2 2/0.744 + CDS 141032 - 144175 3156 ## COG0419 ATPase involved in DNA repair 138 78 Op 3 . + CDS 144217 - 145485 926 ## COG2814 Arabinose efflux permease - Term 145696 - 145745 4.4 139 79 Tu 1 . - CDS 145754 - 146662 295 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase - Prom 146751 - 146810 4.3 + Prom 146697 - 146756 4.1 140 80 Tu 1 . + CDS 146787 - 147698 1180 ## COG2974 DNA recombination-dependent growth factor C 141 81 Tu 1 . - CDS 147856 - 148077 189 ## G2583_0500 hypothetical protein - Prom 148227 - 148286 8.2 142 82 Tu 1 . + CDS 148059 - 148241 98 ## UTI89_C0412 hypothetical protein - Term 148285 - 148321 5.0 143 83 Op 1 . - CDS 148345 - 148629 273 ## COG3123 Uncharacterized protein conserved in bacteria 144 83 Op 2 . - CDS 148701 - 149378 645 ## ECS88_0385 hypothetical protein - Prom 149537 - 149596 12.0 145 84 Op 1 . - CDS 149636 - 149827 264 ## ECS88_0384 hypothetical protein 146 84 Op 2 1/0.860 - CDS 149877 - 150401 358 ## COG0703 Shikimate kinase - Prom 150452 - 150511 5.2 - Term 150485 - 150523 -0.8 147 85 Tu 1 . - CDS 150584 - 151042 353 ## COG1671 Uncharacterized protein conserved in bacteria - Prom 151133 - 151192 3.5 + Prom 151061 - 151120 4.3 148 86 Tu 1 . + CDS 151162 - 151971 963 ## COG0345 Pyrroline-5-carboxylate reductase + Term 151997 - 152047 9.3 - Term 151937 - 151983 -0.7 149 87 Tu 1 . - CDS 152004 - 153104 726 ## COG2199 FOG: GGDEF domain - Prom 153132 - 153191 5.1 - Term 153164 - 153204 7.6 150 88 Tu 1 . - CDS 153221 - 153541 219 ## APECO1_1624 hypothetical protein - Term 153612 - 153657 10.4 151 89 Op 1 . - CDS 153660 - 155075 1371 ## COG1785 Alkaline phosphatase - Prom 155115 - 155174 5.8 152 89 Op 2 . - CDS 155176 - 155436 262 ## ECS88_0376 hypothetical protein - Prom 155621 - 155680 9.4 153 90 Tu 1 . + CDS 155899 - 156993 1192 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes + Term 157002 - 157038 4.0 154 91 Tu 1 . - CDS 157017 - 157229 325 ## APECO1_1628 hypothetical protein - Prom 157309 - 157368 5.7 + Prom 157379 - 157438 3.8 155 92 Tu 1 . + CDS 157489 - 157797 272 ## APECO1_1629 hypothetical protein + Term 157802 - 157856 -0.9 156 93 Op 1 . - CDS 157856 - 158089 284 ## G2583_0486 hypothetical protein 157 93 Op 2 . - CDS 158158 - 158952 788 ## ECS88_0372 lipoprotein 158 93 Op 3 . - CDS 158965 - 160185 1228 ## COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components 159 93 Op 4 . - CDS 160205 - 160399 78 ## ECS88_0370 hypothetical protein - Prom 160483 - 160542 3.4 + Prom 160402 - 160461 3.9 160 94 Tu 1 . + CDS 160537 - 161694 1097 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Term 161704 - 161752 10.6 161 95 Op 1 . - CDS 161695 - 162363 314 ## ECS88_0368 DNA-binding transcriptional regulator 162 95 Op 2 . - CDS 162404 - 165391 2800 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 165425 - 165484 2.0 + Prom 165692 - 165751 7.3 163 96 Tu 1 . + CDS 165917 - 166891 1085 ## COG0113 Delta-aminolevulinic acid dehydratase + Term 166901 - 166934 5.4 164 97 Op 1 5/0.209 - CDS 166931 - 167782 844 ## COG2175 Probable taurine catabolism dioxygenase 165 97 Op 2 7/0.070 - CDS 167779 - 168606 1042 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 166 97 Op 3 6/0.070 - CDS 168603 - 169370 262 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 167 97 Op 4 . - CDS 169383 - 170345 1055 ## COG4521 ABC-type taurine transport system, periplasmic component - Prom 170551 - 170610 5.2 168 98 Tu 1 . + CDS 170299 - 170493 112 ## UTI89_C0383 hypothetical protein + Prom 170681 - 170740 10.0 169 99 Op 1 1/0.860 + CDS 170938 - 171624 417 ## COG2120 Uncharacterized proteins, LmbE homologs 170 99 Op 2 . + CDS 171658 - 172153 272 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis Predicted protein(s) >gi|296918719|gb|GG772981.1| GENE 1 271 - 702 79 143 aa, chain + ## HITS:1 COG:Z1925 KEGG:ns NR:ns ## COG: Z1925 COG0500 # Protein_GI_number: 15801385 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 EDL933 # 1 143 80 222 222 286 99.0 8e-78 MDLNEASLNAASTRAGESKIKHKISHDVFDPYPAALHGQFDSISMFYLLHCLPGNISTKS CVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILS EHFENVKTKVQGTVVMFSASGKK >gi|296918719|gb|GG772981.1| GENE 2 757 - 990 75 77 aa, chain - ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 1 77 132 247 247 123 60.0 8e-29 MASGDALFISELGPLPENVTWLSPAGEFQKWNGTSWIKDTEEETSLLEACKMYRVLLNRV DTSTAPDIEWPVNPVRE >gi|296918719|gb|GG772981.1| GENE 3 1120 - 1419 125 99 aa, chain + ## HITS:1 COG:intD KEGG:ns NR:ns ## COG: intD COG0582 # Protein_GI_number: 16128520 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 7 91 184 268 387 132 82.0 1e-31 MRWNGTRDLQKNQEKRLIDESPKPLKSVVKFALVTVLRKSNIINLEWQQIDMQRQVARVN PEDSKSNRAIGVALNDTASKVLHDQTGKHHKCGCTYQGG >gi|296918719|gb|GG772981.1| GENE 4 1864 - 2052 70 62 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0530 NR:ns ## KEGG: ECS88_0530 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 62 1 62 62 114 100.0 2e-24 MSEAWRAVSFRFLKSKTFCTWLIHTYHDNRRWFAAIVSYIRCGRTLVQQLVQKPLTQQGL TV >gi|296918719|gb|GG772981.1| GENE 5 2102 - 2968 920 288 aa, chain + ## HITS:1 COG:ECs0591 KEGG:ns NR:ns ## COG: ECs0591 COG0190 # Protein_GI_number: 15829845 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Escherichia coli O157:H7 # 1 288 1 288 288 569 100.0 1e-162 MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEE VGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDV DGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELL LAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKV VGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQGE >gi|296918719|gb|GG772981.1| GENE 6 2970 - 3182 310 70 aa, chain + ## HITS:1 COG:ybcJ KEGG:ns NR:ns ## COG: ybcJ COG2501 # Protein_GI_number: 16128512 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 70 8 77 77 127 100.0 7e-30 MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVS FAGHSVQVVA >gi|296918719|gb|GG772981.1| GENE 7 3341 - 3862 416 173 aa, chain + ## HITS:1 COG:ybcI KEGG:ns NR:ns ## COG: ybcI COG1988 # Protein_GI_number: 16128511 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 173 1 173 173 287 98.0 6e-78 MPTVITHAAVPLCIGLGLGSKAIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGF THSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWS DERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMLLMGMLWWRRR >gi|296918719|gb|GG772981.1| GENE 8 3898 - 5283 1745 461 aa, chain - ## HITS:1 COG:cysS KEGG:ns NR:ns ## COG: cysS COG0215 # Protein_GI_number: 16128510 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 461 1 461 461 919 99.0 0 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK LKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAE IIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMD FVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIA QSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRS QLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLF DMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALI QQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK >gi|296918719|gb|GG772981.1| GENE 9 5457 - 5951 572 164 aa, chain + ## HITS:1 COG:ECs0587 KEGG:ns NR:ns ## COG: ECs0587 COG0652 # Protein_GI_number: 15829841 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 327 99.0 5e-90 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMK QKATKDPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGY CVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE >gi|296918719|gb|GG772981.1| GENE 10 6159 - 6707 530 182 aa, chain + ## HITS:1 COG:ybbF KEGG:ns NR:ns ## COG: ybbF COG2908 # Protein_GI_number: 16128508 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 182 59 240 240 374 100.0 1e-104 MAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTL CTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNA VVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHF PF >gi|296918719|gb|GG772981.1| GENE 11 6818 - 7147 211 109 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0523 NR:ns ## KEGG: ECS88_0523 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 109 1 109 109 196 100.0 2e-49 MQRCNGFLISGIALTAGAPLCISWFGLVGFYFGALSLVAAAVISWIVYFWLIYLVLTRPH NQRFVERFILIVGICFFPWSIVLIWAFFASSARAHNQHAEQIKNSTTDG >gi|296918719|gb|GG772981.1| GENE 12 7243 - 7752 620 169 aa, chain + ## HITS:1 COG:ECs0585 KEGG:ns NR:ns ## COG: ECs0585 COG0041 # Protein_GI_number: 15829839 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 278 99.0 4e-75 MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEE NGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLA IGKAGAANAALLAAQILATHDKELHQRLNEWRKAQTDEVLENPDPRGAA >gi|296918719|gb|GG772981.1| GENE 13 7749 - 8816 1158 355 aa, chain + ## HITS:1 COG:purK KEGG:ns NR:ns ## COG: purK COG0026 # Protein_GI_number: 16128506 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Escherichia coli K12 # 1 354 1 354 355 685 98.0 0 MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTR ELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLSEHSEWPAVFDRLGELAIVK RRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLT HNLHQNGILRTSVAFPQANAQQQAQAEEMLSAIMQELSYVGVMAMECFVTPQGLLINELA PRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDLNYDWLKLPLV HLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVMWAQSKFS >gi|296918719|gb|GG772981.1| GENE 14 8969 - 9862 1026 297 aa, chain - ## HITS:1 COG:arcC KEGG:ns NR:ns ## COG: arcC COG0549 # Protein_GI_number: 16128505 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 297 1 297 297 541 97.0 1e-154 MKTLVVALGGNALLQRGEALTAKNQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLAL QNLAWKEVEPYPLDVLVAESQGMIGYMLAQGLSAQPQMPPVTTVLTRIEVSPDDPAFLQP EKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVI CSGGGGVPVAEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIR RATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL >gi|296918719|gb|GG772981.1| GENE 15 9859 - 10674 583 271 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0519 NR:ns ## KEGG: ECS88_0519 # Name: ylbF # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 271 1 271 271 531 100.0 1e-149 MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQ FDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAVAWMQRAEETG LFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAA WYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAA AIDSLLALGHTSGADTLLGFWLGQQLLQGKP >gi|296918719|gb|GG772981.1| GENE 16 10685 - 11944 1304 419 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0518 NR:ns ## KEGG: ECS88_0518 # Name: ylbE # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 419 1 419 419 816 100.0 0 MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNKGKTLLHAGPPMRWQEMTGPMKG ACVGACLFEGWAKDEAQAQAMLEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDG NRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGI TMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAA MDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMG DSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQG ACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG >gi|296918719|gb|GG772981.1| GENE 17 11954 - 13621 1834 555 aa, chain - ## HITS:1 COG:fdrA KEGG:ns NR:ns ## COG: fdrA COG0074 # Protein_GI_number: 16128502 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli K12 # 1 555 1 555 555 1010 97.0 0 MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNHAT PNDICVAIRSEAADAGIAQAVMQQLEEALKQLAQGSGSSQALTQVRRWDSASQKLPDANL ALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMI AATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISA LTALEMLSADEKSEVLAFVSKPPAETVRLKIVNAMKATGKPTVALFLGYTPAVARDENVW FASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADD THQHGMMLDADGHQILDLGDDFYTVGRPHPMIDPTLRNLLIADLGAKPQVRVLLLDVVIG FGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVS SLPEATLLAAALIHPLPSATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPV AGGNKKLARLLERLQ >gi|296918719|gb|GG772981.1| GENE 18 13938 - 14987 1007 349 aa, chain + ## HITS:1 COG:ECs0579 KEGG:ns NR:ns ## COG: ECs0579 COG2055 # Protein_GI_number: 15829833 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 699 98.0 0 MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGG TNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQKGVAVVGISRMGHSGAI SYFVQQAARAGLIGISLCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQ AWGKVLDARSRNMSIPDTWAVDKNGAPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLL GLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNTITPAPGFN QVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ >gi|296918719|gb|GG772981.1| GENE 19 15009 - 16244 1070 411 aa, chain + ## HITS:1 COG:ylbB KEGG:ns NR:ns ## COG: ylbB COG0624 # Protein_GI_number: 16128500 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli K12 # 1 411 1 411 411 868 99.0 0 MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVG NLYGRLSGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEV VAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPR QDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVY AFSRICHQSVEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDATVLRDFTQ QLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCESEKLNYRVMHSGAGHDA QIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK >gi|296918719|gb|GG772981.1| GENE 20 16255 - 17040 892 261 aa, chain + ## HITS:1 COG:ylbA KEGG:ns NR:ns ## COG: ylbA COG3257 # Protein_GI_number: 16128499 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in glyoxylate utilization # Organism: Escherichia coli K12 # 1 261 1 261 261 495 98.0 1e-140 MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFV DYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFVLSEGGYLYCPPGSLMTFV NAQAEDSQIFLYKRRYIPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMN MHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYG VGRGEAFSYIYSKDCNRDVEI >gi|296918719|gb|GG772981.1| GENE 21 17256 - 18401 1134 381 aa, chain - ## HITS:1 COG:ybbZ KEGG:ns NR:ns ## COG: ybbZ COG1929 # Protein_GI_number: 16128498 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Escherichia coli K12 # 1 381 1 381 381 641 98.0 0 MKIVIAPDSFKESLSAEKCCQAIKAGFSTIFPDAHYICLPIADGGEGTVEAMVAATGGNI VTLEVCGPMGETVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRH ALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLAANGGNLARVASIEMDECD PRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEIN VCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTA GGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGET NLFNSARNIACAIKIGQGIKN >gi|296918719|gb|GG772981.1| GENE 22 18423 - 19724 984 433 aa, chain - ## HITS:1 COG:ECs0575 KEGG:ns NR:ns ## COG: ECs0575 COG2233 # Protein_GI_number: 15829829 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Escherichia coli O157:H7 # 1 433 3 435 435 747 99.0 0 MFNFAVGRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFA QAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFS GLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVM CLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPG IILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFS PFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLL FSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLA VLMDNLIPWERIE >gi|296918719|gb|GG772981.1| GENE 23 19780 - 21141 1443 453 aa, chain - ## HITS:1 COG:ybbX KEGG:ns NR:ns ## COG: ybbX COG0044 # Protein_GI_number: 16128496 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli K12 # 1 453 1 453 453 939 99.0 0 MSFDLIIKNGTVILENEARVVDIAVKDGKIAAIGQDLGDAKDVMDASGLVVSPGMVDAHT HISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDA AQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELG QPVLVHCENALICDALGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHV CHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGM WEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMF GKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGA RITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ >gi|296918719|gb|GG772981.1| GENE 24 21201 - 22655 1330 484 aa, chain - ## HITS:1 COG:ECs0572 KEGG:ns NR:ns ## COG: ECs0572 COG1953 # Protein_GI_number: 15829826 # Func_class: F Nucleotide transport and metabolism; H Coenzyme transport and metabolism # Function: Cytosine/uracil/thiamine/allantoin permeases # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 807 98.0 0 MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILDLSTF SIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWF GLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLLFWLVNVGIGFGGGKVL NKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPGGIQKAENSGFLFLVVINAVVAVW AAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDI VQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLL ICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDN GFNLTAFSVTLVAVILSLGGKLIPFMEPLSRVSWFVGVIVAFAAYALLKKRTTAEKTGEQ KTIG >gi|296918719|gb|GG772981.1| GENE 25 22825 - 23703 1114 292 aa, chain - ## HITS:1 COG:ybbQ KEGG:ns NR:ns ## COG: ybbQ COG2084 # Protein_GI_number: 16128493 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli K12 # 1 292 1 292 292 550 99.0 1e-156 MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTDASDIIF IMVPDTPQVEDVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVS GGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNI EAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLN LALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSALVQALELMANHKLA >gi|296918719|gb|GG772981.1| GENE 26 23803 - 24579 754 258 aa, chain - ## HITS:1 COG:ECs0569 KEGG:ns NR:ns ## COG: ECs0569 COG3622 # Protein_GI_number: 15829823 # Func_class: G Carbohydrate transport and metabolism # Function: Hydroxypyruvate isomerase # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 546 98.0 1e-155 MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKQVLASNKLEHTLHN LPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKINCLVGKTPTGFSSEQIHT TLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQALKLIDDVGCCNLKIQYDIY HMQRMEGELTNTMTQWADKIGHLQIADNPHRGEPGTGEINYEYLFTVIENSDYNGWVGCE YKPQTTTEAGLRWMDPYR >gi|296918719|gb|GG772981.1| GENE 27 24592 - 26373 2050 593 aa, chain - ## HITS:1 COG:ECs0568 KEGG:ns NR:ns ## COG: ECs0568 COG3960 # Protein_GI_number: 15829822 # Func_class: R General function prediction only # Function: Glyoxylate carboligase # Organism: Escherichia coli O157:H7 # 1 593 1 593 593 1202 99.0 0 MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEG YTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITGQAPRARLHKEDFQAVDIE AIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLVDLPFDVQVAEIEFDPDMYEP LPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMG WGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVH IDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEWVADCQQRKRTLL RKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGP LGWTIPAALGVCAADPERNVVAISGDFDFQFLIEELAVGAQFNIPYIHVLVNNAYLGLIR QSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKI LMAQYRVPVVVEVILERVTNISMGSELDNVMEFEDIADNAADAPTETCFMHYE >gi|296918719|gb|GG772981.1| GENE 28 26463 - 27233 702 256 aa, chain - ## HITS:1 COG:ECs0567 KEGG:ns NR:ns ## COG: ECs0567 COG1414 # Protein_GI_number: 15829821 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 255 16 270 271 493 99.0 1e-139 MAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQ LGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLEC KSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKD LEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVR DTARDISTALGLKAHL >gi|296918719|gb|GG772981.1| GENE 29 27356 - 27838 509 160 aa, chain - ## HITS:1 COG:ECs0566 KEGG:ns NR:ns ## COG: ECs0566 COG3194 # Protein_GI_number: 15829820 # Func_class: F Nucleotide transport and metabolism # Function: Ureidoglycolate hydrolase # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 331 99.0 4e-91 MKLQVLPLSQEAFSAYGDVIETQKRDFFHINNGLVERYHDLALVEILEQDRTLISINRAQ PANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHR NVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA >gi|296918719|gb|GG772981.1| GENE 30 28068 - 28994 639 308 aa, chain + ## HITS:1 COG:ECs0565 KEGG:ns NR:ns ## COG: ECs0565 COG0583 # Protein_GI_number: 15829819 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 308 1 308 308 608 98.0 1e-174 MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTA AGEHLLCQARDWLGWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVARLLAWLNERYP FTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLA NVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGF LPKSLCQSMLDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFL EIFGNPRS >gi|296918719|gb|GG772981.1| GENE 31 29063 - 30157 1176 364 aa, chain + ## HITS:1 COG:ECs0564 KEGG:ns NR:ns ## COG: ECs0564 COG2603 # Protein_GI_number: 15829818 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 364 1 364 364 712 98.0 0 MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMNNDERAAVGICYKQQGS DAALALGHKLVAGEIRQQRMDAWRAACLQNPHGILCCARGGQRSHIVQRWLHDAGIDYPL VEGGYKALRQTAIQATIELSQKPIVLIGGCTGCGKTLLVQQQPNGVDLEGLARHRGSAFG RTLQPQLSQASFENLLAAEMLKTDARQNLRLWVLEDESRMIGSNHLPECLRERMTQATIA VVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQEYCEYLHHGLSAIKRRLGLQRYNE LAARLDAALTTQLTTGSTDGHLAWLVPLLEEYYDPMYRYQLEKKAEKVVFRGEWAEVAEW VKAQ >gi|296918719|gb|GG772981.1| GENE 32 30216 - 32630 2277 804 aa, chain - ## HITS:1 COG:ybbP KEGG:ns NR:ns ## COG: ybbP COG3127 # Protein_GI_number: 16128480 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component # Organism: Escherichia coli K12 # 1 804 1 804 804 1414 98.0 0 MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLSQQSREFMAGDRALRSS REVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAVDDIYPMYGDLQTNPPGLK PQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQEPDSGFNPFQIAPRLMMNLAD VDKTGSVQPGSRVTWRYKFGGSENQLDGYEKWLLPQLKPEQRWYGLEQDEGALGRSIERS QQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAILKTLGAGRAQLRKLIVGQWLMVLV LSAVTGGAIGLLFENVLMVLLKPVLPAALPPASLWPWLWALGTMTVISLLVGLRPYRLLL ATQPLRVLRNDVVANVWPLKFYLPIVSVVVVLLLAGLMGGSMLLWAVLAGAVVLALLCGV LGWMLLNVLRRMTLKSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDR WQQQLPPESPNYFLINIATEQVTPLKAFLAEHQIVPESFYPVVRARLTAINDKPTEGNGD EALNRELNLTWQNARPDHNPIVAGNWPPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEF RAKVTSLRKVDWESLRPNFYFIFPEGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISL LDIGAILKQVGQVLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAG KKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQSKVFDFPWEPDWRLWIVLPCSGALL LSLCGGWLGARLLKGKALFRQFAG >gi|296918719|gb|GG772981.1| GENE 33 32627 - 33313 315 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 25 228 20 223 223 125 36 1e-27 MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLD DGSSGEVRLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESS AESRNGAKALLEQLGLCKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQ TGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLRLVNGQLQEEA >gi|296918719|gb|GG772981.1| GENE 34 33251 - 33907 583 218 aa, chain + ## HITS:1 COG:tesA KEGG:ns NR:ns ## COG: tesA COG2755 # Protein_GI_number: 16128478 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Escherichia coli K12 # 11 218 1 208 208 404 100.0 1e-113 MLPLTDGLLKMMNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSASAAWP ALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQT EQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEV YLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS >gi|296918719|gb|GG772981.1| GENE 35 33897 - 34706 225 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 14 268 3 249 259 91 31 3e-17 MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSMGF TGVLIDLDLPESVDRAADEVIALTDNCLYGIFNNAGFGMYGPLSTISRAQMEQQFSANFF GAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRYS GIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVDKVRHAFISEKPKM RYPVTLVTWAVMVLKRLLPGRVMDKILQG >gi|296918719|gb|GG772981.1| GENE 36 34767 - 35621 1278 284 aa, chain + ## HITS:1 COG:ECs0555 KEGG:ns NR:ns ## COG: ECs0555 COG3118 # Protein_GI_number: 15829809 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Escherichia coli O157:H7 # 1 284 13 296 296 483 100.0 1e-136 MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAK LDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQ AMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQD TRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF GHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY >gi|296918719|gb|GG772981.1| GENE 37 35684 - 36463 839 259 aa, chain - ## HITS:1 COG:ECs0554 KEGG:ns NR:ns ## COG: ECs0554 COG0390 # Protein_GI_number: 15829808 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 259 10 268 268 443 100.0 1e-124 MNSHNITNESLALALMLVVVAILISHKEKLALEKDILWSVGRAIIQLIIVGYVLKYIFSV DDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVGAGITLAVLILSGSIEFIP MQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKLSLGATPKQASAILIRDSIRA ALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLT YRKFYNSRHQLVVTQLKKK >gi|296918719|gb|GG772981.1| GENE 38 36450 - 37127 179 225 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 7 208 1 210 245 73 30 6e-12 MQENSPLLQLQNVGYLAGDTKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLISPT SGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDF LERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEMI HRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYELA >gi|296918719|gb|GG772981.1| GENE 39 37273 - 38190 1349 305 aa, chain + ## HITS:1 COG:ECs0552 KEGG:ns NR:ns ## COG: ECs0552 COG0330 # Protein_GI_number: 15829806 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 536 99.0 1e-152 MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKIN MMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVL GSMELDEMLSQRDSINSRLLHIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAER TKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVS EAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSAN KRTQP >gi|296918719|gb|GG772981.1| GENE 40 38187 - 38645 446 152 aa, chain + ## HITS:1 COG:ZybbJ KEGG:ns NR:ns ## COG: ZybbJ COG1585 # Protein_GI_number: 15800225 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Escherichia coli O157:H7 EDL933 # 1 152 1 152 152 238 98.0 2e-63 MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLLPLGWEWQGVMF AVLTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSS WPVSASEDLGAGTHVEVIAIEGITLIIRAVIA >gi|296918719|gb|GG772981.1| GENE 41 38748 - 39110 356 120 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_0536 NR:ns ## KEGG: EcSMS35_0536 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 120 1 120 120 232 100.0 3e-60 MNEFEKIFNEMNLDRALLPILFRSNRSTVWKYLSGDSTAPASAMSLIMLLQLIQKRNPDL LAEWLTLSDFTIPPEVYLDQPDYWKGWVYTQHKVNKNVLEYLKKHYPDEDQKSMGKGREE >gi|296918719|gb|GG772981.1| GENE 42 39477 - 40493 752 338 aa, chain + ## HITS:1 COG:ECs0548 KEGG:ns NR:ns ## COG: ECs0548 COG5295 # Protein_GI_number: 15829802 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 424 94.0 1e-118 MKTVNVALLALIISATSSPVVLAGDTIEAAATELSAINSGMSQSEIEQKITRFLERTDNS PAAYTYLTEHHYIPSETPDTTQTPPVQTDPDAGQKTVAATGVVQIPARYQSMINARQSAV TDAQQTQITEQQAQIVATQKTLAATGDTQNTAHYQEMINARLAAQNEANQRTTTEQGQKM NALTTDVAAQQQKERAQYDKQMQSLAQKSVQAHEQIESLRQDSAQTQQQLTNTQKRVADN SQQINTLNNHFDSLKNEVEDNRKEANAGTASAIAIASQPQVKTGDVMMVSAGAGTFNGES AVSVGTSFNAGTHTVLKAGISADTQSDFGAGVGVGYSF >gi|296918719|gb|GG772981.1| GENE 43 40582 - 41001 409 139 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0490 NR:ns ## KEGG: ECS88_0490 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 139 2 140 140 234 100.0 1e-60 MNSSIKSFSLLAVILLTGCSSPTSRIADCQAQGVSHDTCYLAEQQRQTAILSASEAQAFK NAEAAQHAQAAKKAIYKGFGMTFRMSSKNFAYLNDSLCAIDEDNKDATVYQSGLYNVIVY HHTGKVALMKEGQFVGYLK >gi|296918719|gb|GG772981.1| GENE 44 40998 - 41201 221 67 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0489 NR:ns ## KEGG: ECS88_0489 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 67 1 67 67 101 100.0 1e-20 MKEQRKIPLTHIMIIGAFIFAFLQVVLLASLVHAVNVNNEIQEGLFQSGRIMVESLQHIL SVQTEIN >gi|296918719|gb|GG772981.1| GENE 45 41205 - 41612 456 135 aa, chain - ## HITS:1 COG:ECs0545 KEGG:ns NR:ns ## COG: ECs0545 COG0789 # Protein_GI_number: 15829799 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 135 1 135 135 265 100.0 1e-71 MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNL EESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRNQLLALANACPGDDSADC PIIENLSGCCHHRAG >gi|296918719|gb|GG772981.1| GENE 46 41737 - 43026 1381 429 aa, chain - ## HITS:1 COG:ybaT KEGG:ns NR:ns ## COG: ybaT COG0531 # Protein_GI_number: 16128470 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 429 2 430 430 665 99.0 0 MNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSG YAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQFL HEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQP AHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPEVIMPRAFLVAIGVTTLLY ISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVF NIMDNMGSERELPKLMNKPLWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYL AVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLWSQGSRALIWIIGALLLSLIVA MVMKRNKTV >gi|296918719|gb|GG772981.1| GENE 47 43032 - 43964 900 310 aa, chain - ## HITS:1 COG:ybaS KEGG:ns NR:ns ## COG: ybaS COG2066 # Protein_GI_number: 16128469 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Escherichia coli K12 # 1 310 1 310 310 599 98.0 1e-171 MLDANKLQQAVDQTYTQFHSLNGGQNADYIPFLANVPGQLAAVAIVTSDGNVYSAGDSDY RFALESISKVCTLALALEDVGPQAVQDKVGADPTGLPFNSVIALELHGGKPLSPLVNAGA IATTSLINAENTEQRWQRILHIQQQLAGEQVALSDEVNQSEQTTNFHNRAIAWLLYSAGY LYCDAMEACDVYTRQCSTLINTIELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMM EGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGIAAFSPPLDEEGNSVRGQKMVASVA KQLGYNVFKG >gi|296918719|gb|GG772981.1| GENE 48 44226 - 46730 2786 834 aa, chain + ## HITS:1 COG:ybaR KEGG:ns NR:ns ## COG: ybaR COG2217 # Protein_GI_number: 16128468 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli K12 # 1 834 1 834 834 1467 99.0 0 MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVTGTASAEQLIETIKQAG YDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLSGMSCASCVTRVQNA LQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAVA TMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSLWLVIGLITLAVMVFAGGHFYRS AWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGH MLEARARQRSSKALEKLLDLTPPTARLVTDEGEKNVPLADVQPGMLLRLTTGDRVPVDGE ITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVR QAQSSKPEIGQLADKISAVFVPVVVVIALISAAIWYFFGPAPQIVYTLVIATTVLIIACP CALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTVVFDKTGTLTEGKPQVVAVKT FADVDEAQALRLAAALEQGSSHPLARAILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHAL LLGNQALLNEQQVDTKAIEAEITAQASQGATPVLLAVDGKAVALLAVRDPLRSDSVAALQ RLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGD GINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG AFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE >gi|296918719|gb|GG772981.1| GENE 49 46788 - 47129 368 113 aa, chain - ## HITS:1 COG:ECs0536 KEGG:ns NR:ns ## COG: ECs0536 COG3093 # Protein_GI_number: 15829790 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Escherichia coli O157:H7 # 1 113 19 131 131 202 100.0 2e-52 MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLA KVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA >gi|296918719|gb|GG772981.1| GENE 50 47165 - 47467 61 100 aa, chain - ## HITS:1 COG:VCA0391 KEGG:ns NR:ns ## COG: VCA0391 COG3549 # Protein_GI_number: 15601154 # Func_class: R General function prediction only # Function: Plasmid maintenance system killer protein # Organism: Vibrio cholerae # 10 100 27 117 117 108 54.0 2e-24 MAQKKNIRSFRDAWLADFFVHSTPHRKIPAEIHTTLSRKLDIINAATSHWDLRSPPGNRY EELSGKLQEYSSIRVNKQYRLIFKWVNGKAEELFLDPHNY >gi|296918719|gb|GG772981.1| GENE 51 47600 - 48394 734 264 aa, chain + ## HITS:1 COG:ybaP KEGG:ns NR:ns ## COG: ybaP COG3735 # Protein_GI_number: 16128466 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 264 1 264 264 504 99.0 1e-143 MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGSHDMAPLPTRLLKKLKN ADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHISQEMGISPSLFSTQPLWQI AMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEGAENQIAMLLQLPDKGLALLD DTLTHWHTNARLLQQMMSWWLNAPPQNNEITLPNTFSQSLYDVLMHQRNLAWRDKLRAMP PGRYVVAVGALHLYGEGNLPQMLR >gi|296918719|gb|GG772981.1| GENE 52 48598 - 49077 699 159 aa, chain + ## HITS:1 COG:ybaK KEGG:ns NR:ns ## COG: ybaK COG2606 # Protein_GI_number: 16128465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 159 1 159 159 290 99.0 8e-79 MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLVAVNGDMKHLA VAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGGISPLGQKKRLPTIIDAPA QEFATIYVSGGKRGLDIELAASDLAKILDAKFADIARRD >gi|296918719|gb|GG772981.1| GENE 53 49245 - 49901 207 218 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C0510 NR:ns ## KEGG: UTI89_C0510 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 218 1 218 218 460 100.0 1e-128 MLKAQLDEFVVGMHSADPVIRIARLISLEEINRHQDFFEHCAKEYRKLATELIFALAEQL NVEMAENNPLVTFAPFKCNRKRKGKMGKWQYCFHGFHCTFENKKTEQNIEVPLAYGFAFG DLDPYFFSGFIKSTPAWQPLPVAIYDDYHDGSRIIQQLLALGKLQKIPSPIPQYTGVAAV DRSNVDIANFRSTLESRLHRCKLRWLLKHVKNSQRSER >gi|296918719|gb|GG772981.1| GENE 54 49898 - 50401 289 167 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0478 NR:ns ## KEGG: ECS88_0478 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 167 1 167 167 331 100.0 7e-90 MKFDHLVDVSFHNFVFNGKFDFVELGQTMAWLEQNFVEPDSKNDMGNGFYIWLFGNVEFH FENNKLYMIWCDYLSQIHLGKAIRFDKGILNNVAELNVTRVFNMLVNEGADLQIRRQSPH TLLIHVNRSGVTLWFEADEEQPGDPQNYMLMAFGLTHRDYDARFQYS >gi|296918719|gb|GG772981.1| GENE 55 50439 - 52091 1802 550 aa, chain - ## HITS:1 COG:ushA KEGG:ns NR:ns ## COG: ushA COG0737 # Protein_GI_number: 16128464 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Escherichia coli K12 # 1 550 1 550 550 1113 99.0 0 MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHGHFWRNEYGEYGLAAQK TLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFD NPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN PEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATYMGHYDNGEHGSNAPGDVEMVRAL PAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADF EFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQL EVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISY KNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKI KGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSV YEPKGEVSWQ >gi|296918719|gb|GG772981.1| GENE 56 52309 - 53529 1151 406 aa, chain + ## HITS:1 COG:ECs0532 KEGG:ns NR:ns ## COG: ECs0532 COG0477 # Protein_GI_number: 15829786 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 674 99.0 0 MAMSEQTQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLILAIYPLLQSEFSLTFM QIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLSGLVLLALAGSFGAVLLAA ALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFGSSLGPLLAAVIIAPYGKGNV AWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIINPLPRNKVVLAVSILLILIFSKY FYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGRKYVIWGSI LGVAPFTLILPYASLHWTGVLTVIIGFILASAFSAILVYAQELLPGRIGMVSGLFFGFAF GMGGLGAAVLGLIADHTSIELVYKICAFLPLLGILTIFLPDNRHKD >gi|296918719|gb|GG772981.1| GENE 57 53768 - 55444 497 558 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 4 543 5 535 618 196 25 8e-49 MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPEL AELGVILLMFGVGLHFSLKDLMAVKSIAIPGAIAQIAVATLLGMALSAVLGWSLMTGIVF GLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLPAVAGMMEQGDV GFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARSAATGSRELFTLSVLALALGIAF GAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPLILIQ QPLAVLATLAIILFGKSVAALFLVRLFGHSQRTALTIAASLAQIGEFAFILAGLGMALNL LPQAGQNLVLAGAILSIMLNPVLFALLEKYLAKTETLEEQTLEEAIEEEKQIPVDICNHA LLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLE CAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQVVMGEREIA RTMLELLETPPAGEVVTR >gi|296918719|gb|GG772981.1| GENE 58 55574 - 56878 1481 434 aa, chain - ## HITS:1 COG:ECs0530 KEGG:ns NR:ns ## COG: ECs0530 COG0524 # Protein_GI_number: 15829784 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 434 1 434 434 914 100.0 0 MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLVDIEAKVDDEFIERYGL SAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNI EIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIP EDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKKYNVPVVLTLGTKFVIAENPQWW QQFLKDHVSILAMNEDEAEALTGESDPLLASDKALDWVDLVLCTAGPIGLYMAGFTEDEA KRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPLRVYSHIAPYMGGPEKIMNTNGAGDGA LAALLHDITANSYHRSNVPNSSKHKFTWLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGL PEREDSLEESYWDR >gi|296918719|gb|GG772981.1| GENE 59 57030 - 57989 697 319 aa, chain + ## HITS:1 COG:aes KEGG:ns NR:ns ## COG: aes COG0657 # Protein_GI_number: 16128460 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Escherichia coli K12 # 1 319 1 319 319 645 97.0 0 MKPENKLPVLDLISAEMKTVVNTLQPDLPPWPATGAIAEQRQYYTLERRFWNVGAPEMAT RAYRVPTKYGQVKTRLFYPQPDSPATLFYLHGGGFILGNLDTHDRIMRLLASYSQCTVIG IDYTLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIGFAGDSAGAMLALASALWLRD KQIDCGKVAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYY CLFNNDLTREVPPCFIAGAEFDPLLDDSCLLYQTLAAHQQPCEFKLYSGMLHAFLHYSRM MKTADEALRDGAQFFTAQL >gi|296918719|gb|GG772981.1| GENE 60 57986 - 58948 972 320 aa, chain - ## HITS:1 COG:ECs0528 KEGG:ns NR:ns ## COG: ECs0528 COG0276 # Protein_GI_number: 15829782 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 621 99.0 1e-178 MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPR VAKLYASVWMEGGSPLMVYSRQQQQALAQRLPETPVALGMSYGSPSLESAVDELLAEHVD HIVVLPLYPQYSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASF AKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALEMAPEKVMMTFQSRFGRE PWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIP ALNATPEHIEMMANLVAAYR >gi|296918719|gb|GG772981.1| GENE 61 59080 - 59724 937 214 aa, chain - ## HITS:1 COG:ECs0527 KEGG:ns NR:ns ## COG: ECs0527 COG0563 # Protein_GI_number: 15829781 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Escherichia coli O157:H7 # 1 214 1 214 214 399 99.0 1e-111 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVT DELVIALVKERIAQEDCRYGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRI VGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIG YYSKEAEAGNTKYAKVDGTKPVAEVRAALEKILG >gi|296918719|gb|GG772981.1| GENE 62 59927 - 61801 2666 624 aa, chain - ## HITS:1 COG:ECs0526 KEGG:ns NR:ns ## COG: ECs0526 COG0326 # Protein_GI_number: 15829780 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Escherichia coli O157:H7 # 1 624 1 624 624 1181 99.0 0 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGD GELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLI GQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITLHL REGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDGETVISWEKINKAQALWTRNKSE ITDEEYKEFYKHIAHDFNEPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLY VQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQML EKLAKDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYV SRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPF QSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVS TDADEMSTQMAKLFAAAGQKVPEVKYIFELNPDHVLVKRAADTEDEAKFSEWVELLLDQA LLAERGTLEDPNLFIRRMNQLLVS >gi|296918719|gb|GG772981.1| GENE 63 61911 - 62516 567 201 aa, chain - ## HITS:1 COG:ECs0525 KEGG:ns NR:ns ## COG: ECs0525 COG0353 # Protein_GI_number: 15829779 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 399 100.0 1e-111 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE LEMVDGTTLSHSLAGRHKIRF >gi|296918719|gb|GG772981.1| GENE 64 62516 - 62845 227 109 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 5 109 9 114 114 92 41 2e-17 MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRVEIDPS LLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLPPGFKMPF >gi|296918719|gb|GG772981.1| GENE 65 62898 - 64829 1837 643 aa, chain - ## HITS:1 COG:dnaX KEGG:ns NR:ns ## COG: dnaX COG2812 # Protein_GI_number: 16128454 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Escherichia coli K12 # 1 643 1 643 643 1116 99.0 0 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSTLKGSTVELTIVEDDNPAVRTPL EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI >gi|296918719|gb|GG772981.1| GENE 66 64958 - 65509 820 183 aa, chain - ## HITS:1 COG:apt KEGG:ns NR:ns ## COG: apt COG0503 # Protein_GI_number: 16128453 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Escherichia coli K12 # 1 183 1 183 183 349 100.0 1e-96 MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKV VGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGD KVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPF PGH >gi|296918719|gb|GG772981.1| GENE 67 65662 - 66039 324 125 aa, chain - ## HITS:1 COG:ECs0521 KEGG:ns NR:ns ## COG: ECs0521 COG2832 # Protein_GI_number: 15829775 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 125 1 125 125 197 97.0 5e-51 MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSPRFHAWLLYRSWFGSYL RFWQKHHAMPRGAKPRAILLILITFTISLWFVQMPWVRIMLLVILACLLFYMWRIPVIDE KQEKH >gi|296918719|gb|GG772981.1| GENE 68 66109 - 66636 524 175 aa, chain + ## HITS:1 COG:priC KEGG:ns NR:ns ## COG: priC COG3923 # Protein_GI_number: 16128451 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N'' # Organism: Escherichia coli K12 # 1 175 1 175 175 239 97.0 2e-63 MKTALLLEKLEGQLATLRQRCAPVAQFATLSARFNRHLFQTRATTLQACLDEAGDNLAAL RHAVEQQQLPQVAWLAEHLAAQLEAIAREATAWSLREWDSAPPKIARWQRKRIQHQDFER RLREMVAERRARLARATDLVEQQTLHREVEAYEARLARCRHALEKIENRLARLTR >gi|296918719|gb|GG772981.1| GENE 69 66650 - 66811 197 53 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0463 NR:ns ## KEGG: ECS88_0463 # Name: ybaM # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 53 1 53 53 72 100.0 5e-12 MSLENAPDDVKLAVDLIVLLEENQIPARTVLRALDIVKRDYEKKLTRDDEAEK >gi|296918719|gb|GG772981.1| GENE 70 67023 - 70385 3647 1120 aa, chain - ## HITS:1 COG:ECs0518 KEGG:ns NR:ns ## COG: ECs0518 COG3264 # Protein_GI_number: 15829772 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 1120 1 1120 1120 2067 99.0 0 MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTKADLQAQLDSLNKQKDL SAQDKLVQQDLTDTLATLDKIDRVKEETVQLRQKVAEAPEKMRQATAALTALSDVDNDEE TRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVSLQTQPERVQNAMYNASQQLQ QIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQRKSLEGNTVLQDTLQKQRDYVT ANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPDEAARIQANPLVKQELEINQQLSQR LITATENGNQLMQQNIKVKNWLERALQSERNIKEQIAVLKDSLLLSRILYQQQQTLPSAD ELENMTNRIADLRLEQFEVNQQRDALFQSDAFVSKLEEGHTNEVNSEVHDALLQVVDMRR ELLDQLNKQLGNQLMMAINLQINQQQLMSVSKNLKSILTQQIFWVNSNRPMDWDWIKAFP QTLKDEFKSMKITVNWEKAWPAVFIAFLAGLPLLLIAGLIHWRLGWLKAYQQKLASAVGS LRNDSQLNTPKAILIDLIRALPVCLIILAVGLILLTMQLNISELLWSFSKKLAIFWLVFG LCWKVLEKNGVAVRHFGMPEQQTSHWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLG QAMIFFNLLLIAFLVWPMCRESWRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLR LSGRWIETVYLVIIWNLLYQTVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPT IALEQVNQQTLRITMLLMFALFGVMFWAIWSDLITVFSYLDSITLWHYNATEAGAAVVKN VTMGSLLFAIIASMVAWALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMT VFGSLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGT VSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRK VLLKAATEHPRVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCR ENDINIAFNQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG >gi|296918719|gb|GG772981.1| GENE 71 70513 - 71160 477 215 aa, chain - ## HITS:1 COG:acrR KEGG:ns NR:ns ## COG: acrR COG1309 # Protein_GI_number: 16128448 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 215 1 215 215 418 100.0 1e-117 MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFS EIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVTEERRRLLMEIIFHKCEFV GEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMTRRAAIIMRGYISGLMENWLF APQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE >gi|296918719|gb|GG772981.1| GENE 72 71302 - 72495 1250 397 aa, chain + ## HITS:1 COG:ECs0516 KEGG:ns NR:ns ## COG: ECs0516 COG0845 # Protein_GI_number: 15829770 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 397 1 397 397 659 99.0 0 MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRT SAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQAAYDSAKGDLAKAQAAAN IAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPI SGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENG KAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEG LNPNAILVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVV ISGLQKVRPGVQVKAQEVTADNNQQAASGAQPEQSKS >gi|296918719|gb|GG772981.1| GENE 73 72518 - 75667 3394 1049 aa, chain + ## HITS:1 COG:acrB KEGG:ns NR:ns ## COG: acrB COG0841 # Protein_GI_number: 16128446 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1049 1 1049 1049 2000 100.0 0 MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDT VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGS QYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANAL DTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL SVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGR YLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLT KEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKD AMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNG LEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYR MLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEA MELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFS VMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGL IEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIF FVPVFFVVVRRRFSRKNEDIEHSHTVDHH >gi|296918719|gb|GG772981.1| GENE 74 76212 - 76586 259 124 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_0213 NR:ns ## KEGG: ECIAI39_0213 # Name: ybaJ # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 124 1 124 124 243 100.0 2e-63 MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAINLQLNELIEHIATFAL NYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRKSGNRLFRCFVNATKENPA SLSC >gi|296918719|gb|GG772981.1| GENE 75 76612 - 76830 179 72 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1553 NR:ns ## KEGG: APECO1_1553 # Name: hha # Def: Hha protein # Organism: E.coli_APEC # Pathway: not_defined # 1 72 68 139 139 137 100.0 1e-31 MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLY DKIPSSVWKFIR >gi|296918719|gb|GG772981.1| GENE 76 77004 - 77555 381 183 aa, chain + ## HITS:1 COG:ylaD KEGG:ns NR:ns ## COG: ylaD COG0110 # Protein_GI_number: 16128443 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 1 183 1 183 183 369 97.0 1e-102 MSTEKEKMIAGELYHSADGALSRDRLRARRLIHRYNHSLVEEHTLRQQILADLFGQVTEA YIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVAR NSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARII KKL >gi|296918719|gb|GG772981.1| GENE 77 77671 - 78141 489 156 aa, chain + ## HITS:1 COG:no KEGG:G2583_0570 NR:ns ## KEGG: G2583_0570 # Name: ylaC # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 156 14 169 169 304 100.0 9e-82 MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYVAFFATLAVMLQSETLS GSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGEWYNTRFVPAALVEAILNS PRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS >gi|296918719|gb|GG772981.1| GENE 78 78299 - 79855 1183 518 aa, chain + ## HITS:1 COG:ECs0510 KEGG:ns NR:ns ## COG: ECs0510 COG4943 # Protein_GI_number: 15829764 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Escherichia coli O157:H7 # 1 518 1 518 518 1034 98.0 0 MLVRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELNTYSSRVAIRANKVATQ GKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFP EPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG NAHNVVITSSDELAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKG WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI SINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHE IYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIKMAKTLKLKMVAEGIE TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL >gi|296918719|gb|GG772981.1| GENE 79 79897 - 80250 448 117 aa, chain - ## HITS:1 COG:ECs0509 KEGG:ns NR:ns ## COG: ECs0509 COG5507 # Protein_GI_number: 15829763 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 117 1 117 117 211 99.0 2e-55 MKYVDGFVVAVPADKKDAYREMAAKAVPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA EENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE >gi|296918719|gb|GG772981.1| GENE 80 80629 - 80940 293 103 aa, chain + ## HITS:1 COG:ECs0508 KEGG:ns NR:ns ## COG: ECs0508 COG3695 # Protein_GI_number: 15829762 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Escherichia coli O157:H7 # 1 103 27 129 129 201 99.0 3e-52 MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRV VNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQLYRWNY >gi|296918719|gb|GG772981.1| GENE 81 80971 - 81543 486 190 aa, chain - ## HITS:1 COG:ECs0507 KEGG:ns NR:ns ## COG: ECs0507 COG3126 # Protein_GI_number: 15829761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 235 100.0 4e-62 MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKV ALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFVLPFNPADVQPNARILLSA AITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPVQASGGATTTVPSTSPTQVNP SSAVPAPTQY >gi|296918719|gb|GG772981.1| GENE 82 81761 - 82621 765 286 aa, chain + ## HITS:1 COG:ECs0506 KEGG:ns NR:ns ## COG: ECs0506 COG1946 # Protein_GI_number: 15829760 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 555 99.0 1e-158 MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKETVPDERLVHSF HSYFLRPGDSKKPIIYDVETLRDGNSFSARRVSAIQNGKPIFYMTASFQAPEAGFEHQKT MPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEVRPVEFHNPLKGHVAEPHRQV WIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIGFLEPGIQIATIDHSMWFHRPFN LNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNHN >gi|296918719|gb|GG772981.1| GENE 83 82670 - 83956 1537 428 aa, chain - ## HITS:1 COG:ECs0505 KEGG:ns NR:ns ## COG: ECs0505 COG0004 # Protein_GI_number: 15829759 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 721 99.0 0 MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLFMTVPGIALFYGGLIRG KNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNNFFGNINGLMLKNIELTAVMGSIYQY IHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWGGGLLASHGA LDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAG SAGTANEIAALAFVNTVVATAAAILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGY IGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASSLG GVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGLDVNS HGENAYNA >gi|296918719|gb|GG772981.1| GENE 84 83986 - 84324 454 112 aa, chain - ## HITS:1 COG:ECs0504 KEGG:ns NR:ns ## COG: ECs0504 COG0347 # Protein_GI_number: 15829758 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 196 100.0 1e-50 MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVK IDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL >gi|296918719|gb|GG772981.1| GENE 85 84505 - 86286 218 593 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 346 565 135 355 398 88 34 2e-16 MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVAKNNLP LKVGAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQP VGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRMALVAIMIFPVVLV VMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERMGEASRSHYMA RMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIE LTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDRPLQSGTIDVDNVSFAYRDDNLVLKNI NLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSTLSHSALRQGVAMV QQDPVVLADTFLANVTLGRDISEERVWQALEIVQLAELARSMSDGIYTPLGEQGNNLSVG QKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALAAVREHTTLVVIAHRLSTIVD ADTILVLHRGQAVEQGTHQQLLAAQGRYWQMYQLQLAGEELAASVREEESLSA >gi|296918719|gb|GG772981.1| GENE 86 86279 - 88051 199 590 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 342 546 137 340 398 81 28 3e-14 MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVDGVTEQHFTTGQILMWI ATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLMARA TNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQLTLFALLPMPVMAIMIKRNGD ALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARI DARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFIMYLGLMIWPMLALAWMFNI VERGSAAYSRIRTMLAEAPVVIDGSDKVPEGRGELDVNIRQFTYPQTDHPALENVNFALK PGQMVGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF LFSDTVANNIALGCPNAIQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQR ISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEI IVMQHGHIGQRGNHDVLVQQSGWYRDMYRYQQLEAALDDAPEIREEAIDA >gi|296918719|gb|GG772981.1| GENE 87 88081 - 88539 439 152 aa, chain - ## HITS:1 COG:ybaO KEGG:ns NR:ns ## COG: ybaO COG1522 # Protein_GI_number: 16128432 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 152 30 181 181 308 100.0 2e-84 MLDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKI GLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEF YKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE >gi|296918719|gb|GG772981.1| GENE 88 88674 - 89492 710 272 aa, chain - ## HITS:1 COG:cof KEGG:ns NR:ns ## COG: cof COG0561 # Protein_GI_number: 16128431 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 272 5 276 276 557 99.0 1e-159 MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDA YLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALL QAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCL EVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLGSVGSGFIMGNAMPQLRAEL PHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE >gi|296918719|gb|GG772981.1| GENE 89 89577 - 91292 1032 571 aa, chain + ## HITS:1 COG:ECs0499 KEGG:ns NR:ns ## COG: ECs0499 COG4533 # Protein_GI_number: 15829753 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 6 571 1 566 566 1101 99.0 0 MFRVYMRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEW QAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQ WQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWET STDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLT FFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLK AVEYWITPPLFEKDMGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSLRLSL WQARKVISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPDEVKLPKTLTLVYHLP IELHTMAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQW LRCDPLWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKAVFSQLMADATLTPLFNYHY RISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ >gi|296918719|gb|GG772981.1| GENE 90 91357 - 92052 714 231 aa, chain + ## HITS:1 COG:ECs0498 KEGG:ns NR:ns ## COG: ECs0498 COG0603 # Protein_GI_number: 15829752 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 482 99.0 1e-136 MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARAHKV LDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQVKAEAVI TGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALADYYGKLDL VRNETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKPTVMAAMKQKTGLK >gi|296918719|gb|GG772981.1| GENE 91 92104 - 92502 365 132 aa, chain - ## HITS:1 COG:ECs0497 KEGG:ns NR:ns ## COG: ECs0497 COG0824 # Protein_GI_number: 15829751 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Escherichia coli O157:H7 # 1 132 1 132 132 251 99.0 3e-67 MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWHGLENSDSFHWMTAHNIAFVVVNININY RRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADALITFVCIDLKTQKALALE GELREKLEQMVK >gi|296918719|gb|GG772981.1| GENE 92 92608 - 92979 565 123 aa, chain - ## HITS:1 COG:ybaV KEGG:ns NR:ns ## COG: ybaV COG1555 # Protein_GI_number: 16128427 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Escherichia coli K12 # 1 123 1 123 123 180 99.0 5e-46 MKHGIKALLITLSLACAGMSHSALAAASVAKPTTVETKAEAPAAQSKAAVPAKASDEEGT RVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVEDLKQVPGMGNSLVERNLAV LTL >gi|296918719|gb|GG772981.1| GENE 93 93130 - 95001 2257 623 aa, chain - ## HITS:1 COG:ybaU KEGG:ns NR:ns ## COG: ybaU COG0760 # Protein_GI_number: 16128426 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli K12 # 1 623 1 623 623 1106 100.0 0 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAKVNDQEISRGQFENAFN SERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQA IFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGET DELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLDA ATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAK EKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAK VKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQAAGVKATQTGWFS KDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIITVDGDRAFVLRISEHKPEAVKPLA DVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPI SQAAFALPLPAKDKPSYGMATDMQGNVVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIV FEALMSNLRKEAKIKIGDALEQQ >gi|296918719|gb|GG772981.1| GENE 94 95193 - 95465 439 90 aa, chain - ## HITS:1 COG:YPO3154 KEGG:ns NR:ns ## COG: YPO3154 COG0776 # Protein_GI_number: 16123316 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 90 1 90 90 126 92.0 1e-29 MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG RNPQTGKEITIAAAKVPSFRAGKALKDAVN >gi|296918719|gb|GG772981.1| GENE 95 95674 - 98028 2971 784 aa, chain - ## HITS:1 COG:lon KEGG:ns NR:ns ## COG: lon COG0466 # Protein_GI_number: 16128424 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Escherichia coli K12 # 1 784 1 784 784 1482 100.0 0 MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEAST DEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYLESP TIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLADTIAAHMPLKLADK QSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE LGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQ VPWNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGV GKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLF LLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAG VRGLEREISKLCRKAVKQLLLDKSLKHIEINGDNLHDYLGVQRFDYGRADNENRVGQVTG LAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYE KRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK EKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQV VTAK >gi|296918719|gb|GG772981.1| GENE 96 98216 - 99490 238 424 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 159 386 250 432 466 96 31 8e-19 MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRE RSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGP TGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGI VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDT SKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGL IPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAK KAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQQ ASGE >gi|296918719|gb|GG772981.1| GENE 97 99616 - 100239 683 207 aa, chain - ## HITS:1 COG:ECs0491 KEGG:ns NR:ns ## COG: ECs0491 COG0740 # Protein_GI_number: 15829745 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 417 100.0 1e-117 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER DTERDRFLSAPEAVEYGLVDSILTHRN >gi|296918719|gb|GG772981.1| GENE 98 100494 - 101783 1783 429 aa, chain - ## HITS:1 COG:ECs0490 KEGG:ns NR:ns ## COG: ECs0490 COG0544 # Protein_GI_number: 15829744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Escherichia coli O157:H7 # 1 429 1 429 432 734 100.0 0 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA SVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGL EAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGG KASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKV EERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDI DVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNEL KADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEK ETTFNELMN >gi|296918719|gb|GG772981.1| GENE 99 102127 - 102444 257 105 aa, chain - ## HITS:1 COG:ECs0489 KEGG:ns NR:ns ## COG: ECs0489 COG0271 # Protein_GI_number: 15829743 # Func_class: T Signal transduction mechanisms # Function: Stress-induced morphogen (activity unknown) # Organism: Escherichia coli O157:H7 # 1 105 12 116 116 204 100.0 3e-53 MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMI YSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAGSIA >gi|296918719|gb|GG772981.1| GENE 100 102749 - 103327 655 192 aa, chain + ## HITS:1 COG:yajG KEGG:ns NR:ns ## COG: yajG COG3056 # Protein_GI_number: 16128419 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Escherichia coli K12 # 1 192 35 226 226 355 100.0 2e-98 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAK VTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVNLQIIVSQLYADVSQGNVR YNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNKNIADAVNSVLTDTIADMSQD TSIHEFIKQNAR >gi|296918719|gb|GG772981.1| GENE 101 103371 - 104846 1358 491 aa, chain + ## HITS:1 COG:ECs0487 KEGG:ns NR:ns ## COG: ECs0487 COG0477 # Protein_GI_number: 15829741 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 491 1 491 491 838 99.0 0 MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYV FKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLEPGTQLRWMAALAVVIAFC SASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWLM AALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAF AMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQG ASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGTSAFVALLMTLCNKSFSATQFALLSAL SAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAAVPGLILLLVCRQTLEYTRVNGNFISRTE YPAGYAFAMWTLAAGISLLAVWLLLLTMDALDLTHFSFLPALLEVGVLVALSGVVLGGLL DYLALRKTHLT >gi|296918719|gb|GG772981.1| GENE 102 105305 - 106261 885 318 aa, chain + ## HITS:1 COG:cyoA KEGG:ns NR:ns ## COG: cyoA COG1622 # Protein_GI_number: 16128417 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Escherichia coli K12 # 1 318 1 315 315 620 98.0 1e-177 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL AHDEKPITIEVVSMDWKWFFIYPEQGIAAVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQ SPNTMSDMATFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH EGMEGMEGMDMSHAESAH >gi|296918719|gb|GG772981.1| GENE 103 106283 - 108274 2004 663 aa, chain + ## HITS:1 COG:ECs0485 KEGG:ns NR:ns ## COG: ECs0485 COG0843 # Protein_GI_number: 15829739 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Escherichia coli O157:H7 # 1 663 1 663 663 1241 100.0 0 MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYLWKEWLTSVDHKRLGIM YIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVI GLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIE YSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII ASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSE IAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTG VKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHF HNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMT RRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLE WATSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFST IFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLK NGN >gi|296918719|gb|GG772981.1| GENE 104 108264 - 108878 688 204 aa, chain + ## HITS:1 COG:cyoC KEGG:ns NR:ns ## COG: cyoC COG1845 # Protein_GI_number: 16128415 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Escherichia coli K12 # 1 204 1 204 204 367 99.0 1e-102 MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTG KDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVVSWLALTWLFGAGFIGMEIYEF HHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL SLFWHFLDVVWICVFTVVYLMGAM >gi|296918719|gb|GG772981.1| GENE 105 108932 - 109207 257 91 aa, chain + ## HITS:1 COG:ECs0483 KEGG:ns NR:ns ## COG: ECs0483 COG3125 # Protein_GI_number: 15829737 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 4 # Organism: Escherichia coli O157:H7 # 1 91 19 109 109 127 98.0 7e-30 MTGFILSIILTVIPFWMVMTGAASPAVILGTILAMAVVQILVHLVCFLHMNTKSDEGWNM TAFVFTVLIIAILVVGSIWIMWNLNYNMMMH >gi|296918719|gb|GG772981.1| GENE 106 109219 - 110109 857 296 aa, chain + ## HITS:1 COG:ECs0482 KEGG:ns NR:ns ## COG: ECs0482 COG0109 # Protein_GI_number: 15829736 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 524 99.0 1e-149 MIFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVGVSLVVASGCVFNNYI DRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVY VGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDSGAAILLAIFSLWQMPHSYAI AIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAV SVWWLGMALRGYKVADDRIWARKLFGFSIIAITALSVMMSVDFMVPDSHTLLAAVW >gi|296918719|gb|GG772981.1| GENE 107 110258 - 111622 1497 454 aa, chain + ## HITS:1 COG:yajR KEGG:ns NR:ns ## COG: yajR COG0477 # Protein_GI_number: 16128412 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 454 3 456 456 811 99.0 0 MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLT QAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAV MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHVLFWMIAILATTGIA LTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQLA DAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQT QFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGW IDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPANIAANEALKVRLLETEG IKEVLIAEEEHSAYVKIDSKVTNRFEVEQAIRQA >gi|296918719|gb|GG772981.1| GENE 108 111750 - 112241 779 163 aa, chain - ## HITS:1 COG:ECs0480 KEGG:ns NR:ns ## COG: ECs0480 COG1666 # Protein_GI_number: 15829734 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 163 7 169 169 280 100.0 7e-76 MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDASKTIKVLSESDFQVNQ LLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGIESATQKKIVKMIKDSKLK VQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKNFRD >gi|296918719|gb|GG772981.1| GENE 109 112409 - 113320 849 303 aa, chain + ## HITS:1 COG:apbA KEGG:ns NR:ns ## COG: apbA COG1893 # Protein_GI_number: 16128410 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Escherichia coli K12 # 1 303 1 303 303 621 99.0 1e-178 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDF LATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTH AARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVN CVINPLTATWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAE NISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYERIGTGLP RPW >gi|296918719|gb|GG772981.1| GENE 110 113283 - 113873 670 196 aa, chain + ## HITS:1 COG:ECs0478 KEGG:ns NR:ns ## COG: ECs0478 COG0693 # Protein_GI_number: 15829732 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli O157:H7 # 1 196 3 198 198 382 99.0 1e-106 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP IGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE VASQLVMAAGIYNYYE >gi|296918719|gb|GG772981.1| GENE 111 113927 - 115375 1580 482 aa, chain - ## HITS:1 COG:ECs0477_1 KEGG:ns NR:ns ## COG: ECs0477_1 COG0301 # Protein_GI_number: 15829731 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 402 1 402 402 791 99.0 0 MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQR LAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFS SIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDV LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV AINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN LRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKI EAEEEKFDFSILDKVVEEANNVDIREIAQQTEQEVVEVETVNGFGPNDVILDIRSIDEQE DKPLKVEGIDVVSLPFYKLSTKFGDLDQSKTWLLWCERGVMSRLQALYLREQGFNNVKVY RP >gi|296918719|gb|GG772981.1| GENE 112 115581 - 115823 377 80 aa, chain + ## HITS:1 COG:ECs0476 KEGG:ns NR:ns ## COG: ECs0476 COG1722 # Protein_GI_number: 15829730 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Escherichia coli O157:H7 # 1 80 1 80 80 112 100.0 1e-25 MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRV QILLSDNEDASLTPFTPDNE >gi|296918719|gb|GG772981.1| GENE 113 115823 - 116722 852 299 aa, chain + ## HITS:1 COG:ispA KEGG:ns NR:ns ## COG: ispA COG0142 # Protein_GI_number: 16128406 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Escherichia coli K12 # 1 299 1 299 299 531 99.0 1e-151 MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFG VSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL AFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALERIHRH KTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQG ADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK >gi|296918719|gb|GG772981.1| GENE 114 116747 - 118609 2022 620 aa, chain + ## HITS:1 COG:dxs KEGG:ns NR:ns ## COG: dxs COG1154 # Protein_GI_number: 16128405 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Escherichia coli K12 # 1 620 1 620 620 1269 99.0 0 MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELT VALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSV GHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLND NEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPG TLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHA VPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFP DRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDR AGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGN AVGVELTPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVAESLNATLVDMRFVKPLDE ALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEM RAELGLDAAGMEAKIKAWLA >gi|296918719|gb|GG772981.1| GENE 115 118664 - 119638 999 324 aa, chain + ## HITS:1 COG:yajO KEGG:ns NR:ns ## COG: yajO COG0667 # Protein_GI_number: 16128404 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 324 25 348 348 654 99.0 0 MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANS YSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDY VDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFV SMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLY QESNENDAQIVERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVD ITLKPEQIAELETPYKPHPVVGFK >gi|296918719|gb|GG772981.1| GENE 116 119692 - 120210 535 172 aa, chain - ## HITS:1 COG:pgpA KEGG:ns NR:ns ## COG: pgpA COG1267 # Protein_GI_number: 16128403 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Escherichia coli K12 # 1 172 1 172 172 312 99.0 2e-85 MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLAAIPFWYLMTFLPWQLY SLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALPTNDWQWVTAGFVIF RILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGILS >gi|296918719|gb|GG772981.1| GENE 117 120188 - 121165 1087 325 aa, chain - ## HITS:1 COG:thiL KEGG:ns NR:ns ## COG: thiL COG0611 # Protein_GI_number: 16128402 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Escherichia coli K12 # 1 325 1 325 325 641 100.0 0 MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDID PADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLESFSDSLFDLLNYYDMQLIG GDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTPGDSAAGLAILQNRLQVADA KDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGARIDLALLP FSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTADI EGLCFIRDGEPVTLDWKGYDHFATP >gi|296918719|gb|GG772981.1| GENE 118 121243 - 121662 520 139 aa, chain - ## HITS:1 COG:ECs0469 KEGG:ns NR:ns ## COG: ECs0469 COG0781 # Protein_GI_number: 15829723 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Escherichia coli O157:H7 # 1 139 1 139 139 245 100.0 2e-65 MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTA YLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSH KFVNGVLDKAAPVIRPNKK >gi|296918719|gb|GG772981.1| GENE 119 121682 - 122152 631 156 aa, chain - ## HITS:1 COG:ECs0468 KEGG:ns NR:ns ## COG: ECs0468 COG0054 # Protein_GI_number: 15829722 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 258 99.0 4e-69 MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQVKDENITIVWVPGAYEL PLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLAHVAQDSEIPVAFGVLTTE SIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA >gi|296918719|gb|GG772981.1| GENE 120 122241 - 123344 914 367 aa, chain - ## HITS:1 COG:ribD_2 KEGG:ns NR:ns ## COG: ribD_2 COG1985 # Protein_GI_number: 16128399 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Escherichia coli K12 # 144 367 1 224 224 434 97.0 1e-121 MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVQALRMAG EKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGI DVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDV QRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQGLYPQQNLRQPVRIVIDSQNRVTP EHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWVEA GPTLAGALLQAGLVDELIVYIAPKLLGNDARGLCTLPGLEKLADAPQFKFKEIRHVGPDV CLHLVGA >gi|296918719|gb|GG772981.1| GENE 121 123348 - 123797 416 149 aa, chain - ## HITS:1 COG:ECs0466 KEGG:ns NR:ns ## COG: ECs0466 COG1327 # Protein_GI_number: 15829720 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Escherichia coli O157:H7 # 1 149 1 149 149 272 100.0 1e-73 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD KVAYIRFASVYRSFEDIKEFGEEIARLED >gi|296918719|gb|GG772981.1| GENE 122 123948 - 124487 418 179 aa, chain + ## HITS:1 COG:no KEGG:Z0513 NR:ns ## KEGG: Z0513 # Name: yajI # Def: hypothetical protein # Organism: E.coli_O157 # Pathway: not_defined # 1 179 1 179 179 309 97.0 4e-83 MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLNKETVKITQQNRLNAKS SSGVYLLPGAKTPARLESQIGTLRMSLVNITPDTDGTTLTLRIQGESNDPLPAFSGTVEY GQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKGMSVDQLGFVRIHDIQPVMQ >gi|296918719|gb|GG772981.1| GENE 123 124785 - 125669 1200 294 aa, chain + ## HITS:1 COG:Ztsx KEGG:ns NR:ns ## COG: Ztsx COG3248 # Protein_GI_number: 15800140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Nucleoside-binding outer membrane protein # Organism: Escherichia coli O157:H7 EDL933 # 1 294 1 294 294 513 98.0 1e-145 MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQLRNDTYLE YEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEIEPRFSIDKLTNTDLSFGP FKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMSLSMNVYAKYQWQNYGAANEN EWDGYRFKVKYFVPITDLWGGQLSYIGFTNFDWGSDLGDDSGYANNGIKTRTNNSIASSH ILALNYDHWHYSVVARYWHNGGQWNDDAELNFGNGNFNVRSTGWGGYLVVGYNF >gi|296918719|gb|GG772981.1| GENE 124 125707 - 126054 432 115 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1600 NR:ns ## KEGG: APECO1_1600 # Name: yajD # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 115 24 138 138 234 100.0 8e-61 MAIIPKNYARLESDYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSN WELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK >gi|296918719|gb|GG772981.1| GENE 125 126184 - 127155 1131 323 aa, chain - ## HITS:1 COG:ECs0460 KEGG:ns NR:ns ## COG: ECs0460 COG0341 # Protein_GI_number: 15829714 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 613 100.0 1e-175 MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEI TLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAEGETGGQVLGSQVLKVINE STNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHD VIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVS LTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLG MKREHMLQQKVEKEGADQPSILP >gi|296918719|gb|GG772981.1| GENE 126 127166 - 128980 2083 604 aa, chain - ## HITS:1 COG:ECs0459 KEGG:ns NR:ns ## COG: ECs0459 COG0342 # Protein_GI_number: 15829713 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Escherichia coli O157:H7 # 1 604 12 615 615 1112 99.0 0 MLIVVIVIGLLYALPNLFGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEE GAILARFDSTDTQLRAREALMGVMGDKYVVALNLAPATPRWLAAIHAEPMKLGLDLRGGV HFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKENNYGLSITFRDAKARDEAIA YLSKRHPDLVISSQGSNQLRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQ PVVLYKRVILTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVE YKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGINNPSEARQLSLLLRAGALIA PIQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIV GIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFS SIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVK KLSI >gi|296918719|gb|GG772981.1| GENE 127 129041 - 129373 489 110 aa, chain - ## HITS:1 COG:ECs0458 KEGG:ns NR:ns ## COG: ECs0458 COG1862 # Protein_GI_number: 15829712 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 201 100.0 4e-52 MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGD EVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL >gi|296918719|gb|GG772981.1| GENE 128 129396 - 130523 1048 375 aa, chain - ## HITS:1 COG:ECs0457 KEGG:ns NR:ns ## COG: ECs0457 COG0343 # Protein_GI_number: 15829711 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Escherichia coli O157:H7 # 1 375 1 375 375 798 100.0 0 MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFH LWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPI FLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRERFDSLGNKN ALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKP RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKYKSDTGPLDP ECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTD FYQRQGREVPPLNVD >gi|296918719|gb|GG772981.1| GENE 129 130578 - 131648 1039 356 aa, chain - ## HITS:1 COG:ECs0456 KEGG:ns NR:ns ## COG: ECs0456 COG0809 # Protein_GI_number: 15829710 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Escherichia coli O157:H7 # 1 356 1 356 356 702 99.0 0 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNN TRVIPARLFGRKASGGKIEVLVERMLDEKRILAHIRASKAPKPGAELLLGDDESINATMT ARHGALFEVEFNDDRSVLDILNSIGHIPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPT AGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAV LAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNF HLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE >gi|296918719|gb|GG772981.1| GENE 130 131867 - 132448 385 193 aa, chain + ## HITS:1 COG:yajB KEGG:ns NR:ns ## COG: yajB COG3124 # Protein_GI_number: 16128389 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 193 1 193 193 346 97.0 1e-95 MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVRE AREWFRNETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFTCYAREQVMTILPDSPPRF INLNNYLWSEQWLVRYRDMDFIQSVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQF YPRMMEQASRKAL >gi|296918719|gb|GG772981.1| GENE 131 132453 - 134267 1514 604 aa, chain - ## HITS:1 COG:ECs0453 KEGG:ns NR:ns ## COG: ECs0453 COG0366 # Protein_GI_number: 15829707 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 604 2 605 605 1234 98.0 0 MLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPG VTAWRAAIELSCGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAIDVPDIGPQWA ADQIFYQIFPDRFARNLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLD GISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLG MRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPK LDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNLQHVAGITEA AKETQPDAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQT CMVWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDVARLPLAVVWLFTWPGVPCIY YGDEVGLDGKNDPFCRKPFPWQVEKQDSALFALYQRMIALRKKSQALRRGGCQVLYAEDN VVVFVRVLNQQRVLVAINRGEACEVVLPASPLLNVAQWQRKEGHGQLTDGILALPAISAT VWMN >gi|296918719|gb|GG772981.1| GENE 132 134426 - 135799 1634 457 aa, chain - ## HITS:1 COG:ECs0452 KEGG:ns NR:ns ## COG: ECs0452 COG1113 # Protein_GI_number: 15829706 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 783 100.0 0 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMR ALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPT VPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQ PTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP MRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINS DVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVI ASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIG YHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ >gi|296918719|gb|GG772981.1| GENE 133 135875 - 137194 1423 439 aa, chain - ## HITS:1 COG:ECs0451 KEGG:ns NR:ns ## COG: ECs0451 COG1114 # Protein_GI_number: 15829705 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Escherichia coli O157:H7 # 1 439 1 439 439 740 99.0 0 MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTV VALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSAL PLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIIWPAGSISTATEA YQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLT LLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTC ACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFT RSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMV VLAIIWDRAAGRQVTSSAH >gi|296918719|gb|GG772981.1| GENE 134 137601 - 138896 1114 431 aa, chain - ## HITS:1 COG:phoR KEGG:ns NR:ns ## COG: phoR COG0642 # Protein_GI_number: 16128385 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 431 1 431 431 839 99.0 0 MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVD RSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGI FWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVM PYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVRE KALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQT FTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPG IAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFV IPERLIAKNSD >gi|296918719|gb|GG772981.1| GENE 135 138954 - 139643 651 229 aa, chain - ## HITS:1 COG:ECs0449 KEGG:ns NR:ns ## COG: ECs0449 COG0745 # Protein_GI_number: 15829703 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 449 99.0 1e-126 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGS GIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVM RRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLL NHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDCMVQTVRGTGYRFSTRF >gi|296918719|gb|GG772981.1| GENE 136 139833 - 141035 864 400 aa, chain + ## HITS:1 COG:ECs0448 KEGG:ns NR:ns ## COG: ECs0448 COG0420 # Protein_GI_number: 15829702 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 793 98.0 0 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQAHQVDAIIVAGDVFDTGSPPSYAR TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGAQPLPII TTGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDIS QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL SVEEVFNRRLALEELDESQQQRLQHLFATTLHSLAGEHEA >gi|296918719|gb|GG772981.1| GENE 137 141032 - 144175 3156 1047 aa, chain + ## HITS:1 COG:ZsbcC KEGG:ns NR:ns ## COG: ZsbcC COG0419 # Protein_GI_number: 15800123 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli O157:H7 EDL933 # 1 1047 1 1047 1047 1465 97.0 0 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLITAQQ QEQQSLNWLTRLDELQQEGSRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA EYSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRLRQ WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVASALAQHAE QRPLRQRLVALHGQIVPQQKRLAQLQVAIQNVTLEQTQRNAALNEMRHRYKEKTQQLADV KTICEQETRIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQARLLTLEKEVK KLGEEGATLRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE DEEESWLATRQQEAQSWQHRQNELTALQNRIQQLTPILETLPQSDELPHSEETVALENWR QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT QLEQLKQNLENQRRQAQTLVTQTAETLTQHQQHRPGGLSLTVTVEQIQQELAQTHQKLRE NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK ERIPVQIKVKKINGLGYSKLESAFAMK >gi|296918719|gb|GG772981.1| GENE 138 144217 - 145485 926 422 aa, chain + ## HITS:1 COG:ECs0446 KEGG:ns NR:ns ## COG: ECs0446 COG2814 # Protein_GI_number: 15829700 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli O157:H7 # 29 422 1 394 394 624 99.0 1e-179 MASLVVILQSITLLATVIGSRSGGCDGGMKKVILSLALGTFGLGMAEFGIMGVLTELAHN VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYL MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ EFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGKLREQFHFLRSPAPWLIFAATMFGN AGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTD FIIVLALLMLFFFGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIA FNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADSSVLAKP LG >gi|296918719|gb|GG772981.1| GENE 139 145754 - 146662 295 302 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 3 298 6 316 319 118 31 2e-25 MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTV GMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAA GAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGK QGCIETFISGTGFATDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVV NILDPDVIVLGGGMSNVDRLYQTVPQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWP QE >gi|296918719|gb|GG772981.1| GENE 140 146787 - 147698 1180 303 aa, chain + ## HITS:1 COG:rdgC KEGG:ns NR:ns ## COG: rdgC COG2974 # Protein_GI_number: 16128378 # Func_class: L Replication, recombination and repair # Function: DNA recombination-dependent growth factor C # Organism: Escherichia coli K12 # 1 303 1 303 303 572 100.0 1e-163 MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVA NGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAF SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWV RSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRI QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE AQR >gi|296918719|gb|GG772981.1| GENE 141 147856 - 148077 189 73 aa, chain - ## HITS:1 COG:no KEGG:G2583_0500 NR:ns ## KEGG: G2583_0500 # Name: ydbD # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 3 73 651 721 721 115 87.0 7e-25 MLLLTTLTEPQERSLAINNSQLAADVKTAWLKEEPSLLLFVEQPDLSLLRDLVKTGATRK IRSEARHRLEEKQ >gi|296918719|gb|GG772981.1| GENE 142 148059 - 148241 98 60 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C0412 NR:ns ## KEGG: UTI89_C0412 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 10 60 1 51 51 96 98.0 3e-19 MSLTTTPGYVRCAMPFGANDHCDFAAMHATIHHLIYLLSSPVPQQYLEIFADIYINLDEL >gi|296918719|gb|GG772981.1| GENE 143 148345 - 148629 273 94 aa, chain - ## HITS:1 COG:ECs0441 KEGG:ns NR:ns ## COG: ECs0441 COG3123 # Protein_GI_number: 15829695 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 94 1 94 94 175 100.0 2e-44 MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDAT DWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL >gi|296918719|gb|GG772981.1| GENE 144 148701 - 149378 645 225 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0385 NR:ns ## KEGG: ECS88_0385 # Name: aroM # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 225 1 225 225 404 100.0 1e-111 MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILT LLNDNHLAHVSRRKVERDLQGVVEVLDNQGYDVIILMSTANISSMTARNTIFLEPSRILP PLVSSIVEDHQVGVIVPVEELLTVQAQKWQILQKPPVFSLGNPIHDSEQKIIDAGKELLA KGADVIMLDCLGFNQRHRDLLQKQLDVPVLLSNVLIARLAAELLM >gi|296918719|gb|GG772981.1| GENE 145 149636 - 149827 264 63 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0384 NR:ns ## KEGG: ECS88_0384 # Name: yaiA # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 63 1 63 63 91 100.0 8e-18 MPTKPPYPREAYIVTIDKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDP DKE >gi|296918719|gb|GG772981.1| GENE 146 149877 - 150401 358 174 aa, chain - ## HITS:1 COG:ECs0438 KEGG:ns NR:ns ## COG: ECs0438 COG0703 # Protein_GI_number: 15829692 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Escherichia coli O157:H7 # 1 174 1 174 174 331 99.0 4e-91 MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDLWLQSQLNMTVAEIVEREEWAGFRAR ETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLR PTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC >gi|296918719|gb|GG772981.1| GENE 147 150584 - 151042 353 152 aa, chain - ## HITS:1 COG:ECs0436 KEGG:ns NR:ns ## COG: ECs0436 COG1671 # Protein_GI_number: 15829691 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 152 41 192 192 291 100.0 2e-79 MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNE IVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGI QTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG >gi|296918719|gb|GG772981.1| GENE 148 151162 - 151971 963 269 aa, chain + ## HITS:1 COG:proC KEGG:ns NR:ns ## COG: proC COG0345 # Protein_GI_number: 16128371 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Escherichia coli K12 # 1 269 1 269 269 486 98.0 1e-137 MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVTVLHDQFGINAAESAQEV AQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGITLDQLARALGHDRKIIRAMP NTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVF MFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGTLKDMVCSPGGTTIEAV RVLEEKGFRAAVIEAMTKCMEKSEKLSKS >gi|296918719|gb|GG772981.1| GENE 149 152004 - 153104 726 366 aa, chain - ## HITS:1 COG:yaiC_2 KEGG:ns NR:ns ## COG: yaiC_2 COG2199 # Protein_GI_number: 16128370 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 196 366 1 171 171 356 100.0 4e-98 MNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPS PGWWWLLLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNALPSTA MLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYP LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA ITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN RTEVAA >gi|296918719|gb|GG772981.1| GENE 150 153221 - 153541 219 106 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1624 NR:ns ## KEGG: APECO1_1624 # Name: psiF # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 106 7 112 112 161 100.0 6e-39 MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKN SKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA >gi|296918719|gb|GG772981.1| GENE 151 153660 - 155075 1371 471 aa, chain - ## HITS:1 COG:phoA KEGG:ns NR:ns ## COG: phoA COG1785 # Protein_GI_number: 16128368 # Func_class: P Inorganic ion transport and metabolism # Function: Alkaline phosphatase # Organism: Escherichia coli K12 # 1 471 24 494 494 865 99.0 0 MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDSLS DKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDY VTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAA LVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAG EWQGKTLREQAQARGYQLVSDTASLNSVTEANQQKPLLGLFADGNMPVRWQGPKATYHGN IDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQ IGETVDLDEAVQRALEFAKKDGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVM VMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK >gi|296918719|gb|GG772981.1| GENE 152 155176 - 155436 262 86 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0376 NR:ns ## KEGG: ECS88_0376 # Name: yaiB # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 86 1 86 86 133 100.0 3e-30 MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIDQVEGALYEVK PDASIPDDDTELLRDYVKKLLRHPRQ >gi|296918719|gb|GG772981.1| GENE 153 155899 - 156993 1192 364 aa, chain + ## HITS:1 COG:ECs0431 KEGG:ns NR:ns ## COG: ECs0431 COG1181 # Protein_GI_number: 15829685 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli O157:H7 # 1 364 1 364 364 726 99.0 0 MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLN ADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGML RVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGL PLFVKPANQGSSVGVSKVTSEEQYTIAVDLAFEFDHKVIVEQGIKGREIECAVLGNDNPQ ASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCAGMAR VDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELALERHAADNAL KTTM >gi|296918719|gb|GG772981.1| GENE 154 157017 - 157229 325 70 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1628 NR:ns ## KEGG: APECO1_1628 # Name: yaiZ # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 70 45 114 114 138 100.0 6e-32 MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVGLVTWVISFWLAGLIIR RRDEETENAQ >gi|296918719|gb|GG772981.1| GENE 155 157489 - 157797 272 102 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1629 NR:ns ## KEGG: APECO1_1629 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 102 1 102 102 200 100.0 1e-50 MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNLLVHAPGVYERLMQVQE TGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ >gi|296918719|gb|GG772981.1| GENE 156 157856 - 158089 284 77 aa, chain - ## HITS:1 COG:no KEGG:G2583_0486 NR:ns ## KEGG: G2583_0486 # Name: yaiW # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 77 288 364 364 150 100.0 2e-35 MSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAKTGKSLPREMLPGIQLESPKITRNLTT AWFAKRVDERRARCMKQ >gi|296918719|gb|GG772981.1| GENE 157 158158 - 158952 788 264 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0372 NR:ns ## KEGG: ECS88_0372 # Name: yaiW # Def: lipoprotein # Organism: E.coli_S88 # Pathway: not_defined # 1 261 1 261 364 493 100.0 1e-138 MSRVNPLSSLSLLAVLILAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKDL ATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLV HTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPMGQTLFGSLNPVRTGGPMQVS IAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA SRNAAFQNAVSKASGVKLALDTVI >gi|296918719|gb|GG772981.1| GENE 158 158965 - 160185 1228 406 aa, chain - ## HITS:1 COG:ECs0427 KEGG:ns NR:ns ## COG: ECs0427 COG1133 # Protein_GI_number: 15829681 # Func_class: I Lipid transport and metabolism # Function: ABC-type long-chain fatty acid transport system, fused permease and ATPase components # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 756 99.0 0 MFKSFFPKPGTFFLSAFVWALIAVIFWQAGGGDWVARITGASGQIPISAARFWSLDFLIF YAYYIVCVGLFALFWFIYSPHRWQYWSILGTALIIFVTWFLVEVGVAVNAWYAPFYDLIQ TALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVSHYVFRWRTAMNEYYMANWQQ LRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIAFLPVLVTLSAHVPELPIVGHIP YGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVEAAYRKELVYGEDDATRATPPTVRE LFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFGLFLLFPSIVAGTITLGLMTQITNVFG QVRGAFQYLINSWTTLVELMSIYKRLRSFEHELDGDKIQEVTHTLS >gi|296918719|gb|GG772981.1| GENE 159 160205 - 160399 78 64 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0370 NR:ns ## KEGG: ECS88_0370 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 64 1 64 64 118 100.0 8e-26 MPAFVILRVLIRLCKQSLVCETRRNNSYGQAGELSALLWVTMGSFIWLTLCSGHAVNTQQ LLKR >gi|296918719|gb|GG772981.1| GENE 160 160537 - 161694 1097 385 aa, chain + ## HITS:1 COG:ECs0426 KEGG:ns NR:ns ## COG: ECs0426 COG1680 # Protein_GI_number: 15829680 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli O157:H7 # 1 385 1 385 385 754 99.0 0 MKRSLLFSAVLYAASLTSVHAAQPITEPEFASDIVDRYADHIFYGSGATGMALVVIDGNQ RVFRSYGETRPGNNVRPQLDSVIRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGA RVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTREQRWKYLSTAKLKAAPGSQ AAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMKDTTYTPSPDQCRRLMVAERGAS PCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQRSNQADRMQTLIYQRAQFTKVIGMD VPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGFITYMAMIPQKNIGAFVVVTRSPLTRF KNMSDGINDLVTELSGNKPLVIPAS >gi|296918719|gb|GG772981.1| GENE 161 161695 - 162363 314 222 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0368 NR:ns ## KEGG: ECS88_0368 # Name: yaiV # Def: DNA-binding transcriptional regulator # Organism: E.coli_S88 # Pathway: not_defined # 1 222 1 222 222 447 100.0 1e-124 MPVKDLTGITAKDAQMLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSNVNSEDTF VILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITL IEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNY IHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY >gi|296918719|gb|GG772981.1| GENE 162 162404 - 165391 2800 995 aa, chain - ## HITS:1 COG:yaiU KEGG:ns NR:ns ## COG: yaiU COG3468 # Protein_GI_number: 16128359 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 529 995 1 467 467 730 98.0 0 MHSWKKKLVVSQLALACTLAITSQANAANYDTWGYHDNTTTDLVWPYDTDNDGIADAGGM DPMGSDGNYVTYNGFVYYNNANGDFDTVFKGDTVNGTISTYYLNHDYASGSVNQVDISNS VIHGAITSELPFGYYSITPAEVNAKGEVVTPQTYNGYNFYNGITTDLDYNWYDGDVFTLN VSNSTIDDDYEALYFTDTYLDGDKSKSTNETFYTALGVAVNLDVESNINITNNSRVAGIA LSEGNTSNTTYTSEYHQWDNNINVSNSTVTSGSQTPLEESNGFFGKSAEPSDYAGNGGEN DVALSFSDNAGSNYSMKNNVNFDHSTLLGDVEFTSHWNNDGVFFYSTGHDSNGDGVLDTN GGWVDDAQNVDELNITLNNGSKWVGSANMSAEVIAPADMYDVAPNSLTPGATIEANDWGR IIDNKVFQSGVFNVALNNGSEWNTVNSSVIDTLAVNNGSQVNVTDSSLVSDTIGLTNGSS LNIGEDGLVATDHLTVDSYSTVNLTESTGWNNYSNLYANIITVTNGGVLDVNVDQFDTEA FRTDKLELTSGNIADHNGNVVSGVFDINSSDYVLNADLVNDRTWDTAQANYGYGVVAMNS DGHLTINGNGDVDNGTELDNSSVDNVVAATGNYKVRIDNATGAGAIADYKDKEIIYVNDV NSNATFSAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTV GTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVG AAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTY VDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSM RYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQ FSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW >gi|296918719|gb|GG772981.1| GENE 163 165917 - 166891 1085 324 aa, chain + ## HITS:1 COG:ECs0423 KEGG:ns NR:ns ## COG: ECs0423 COG0113 # Protein_GI_number: 15829677 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Escherichia coli O157:H7 # 1 324 12 335 335 620 100.0 1e-178 MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKH LAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTC FCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALD AAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQG ADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGS IKRAGADLIFSYFALDLAEKKILR >gi|296918719|gb|GG772981.1| GENE 164 166931 - 167782 844 283 aa, chain - ## HITS:1 COG:ECs0422 KEGG:ns NR:ns ## COG: ECs0422 COG2175 # Protein_GI_number: 15829676 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Probable taurine catabolism dioxygenase # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 555 97.0 1e-158 MSERLSITPLGPYIGAQITGADLTRPLSDNQFEQLYHAVLRHHVVFLRDQAITPQQQRAL AQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIQTPPAGAILAAKELP STGGDTLWASGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEAEHQRWREAVAK NPPLLHPVVRTHPVTGKQALFVNEGFTTRIVDVSEKESEALLGFLFAHITKPEFQVRWRW QPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDIPFYRAG >gi|296918719|gb|GG772981.1| GENE 165 167779 - 168606 1042 275 aa, chain - ## HITS:1 COG:ECs0421 KEGG:ns NR:ns ## COG: ECs0421 COG0600 # Protein_GI_number: 15829675 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 275 1 275 275 416 99.0 1e-116 MSVLINEKLHSHRLKWRWPLSRQVTLSIGTLAVLLTVWWAVAALQLISPLFLPPPQQVLA KLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVLIGIPVGIAMGLSPTVRGILDPIIE LYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLG ASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATD VVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ >gi|296918719|gb|GG772981.1| GENE 166 168603 - 169370 262 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 205 1 215 245 105 30 1e-21 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQL AGKGIQGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMVKKVGLEG AEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQETGK QVLLITHDIEEAVFMATELVLLSPGPGRVLERLPLNFARRFVAGESSRSIKSDPQFIAMR EYVLSRVFEQREAFS >gi|296918719|gb|GG772981.1| GENE 167 169383 - 170345 1055 320 aa, chain - ## HITS:1 COG:tauA KEGG:ns NR:ns ## COG: tauA COG4521 # Protein_GI_number: 16128350 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type taurine transport system, periplasmic component # Organism: Escherichia coli K12 # 1 320 20 339 339 583 98.0 1e-166 MVISSRNTFLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKESGATVDWRKFDS GASIVRALASGDVQIGNLGSSPLAVATSQQVPIEVFLLASKLGNSEALVVKKTISKPEDL IGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAV NALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPD AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKAIIDTAQFLKEQ GKVPAVANDYSQYVTSRFVQ >gi|296918719|gb|GG772981.1| GENE 168 170299 - 170493 112 64 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C0383 NR:ns ## KEGG: UTI89_C0383 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 64 1 64 64 117 100.0 1e-25 MNASAARNVLRDEITMIVCSPVLLWEQYSGIKTFIKRISRYRTDDFILSKKAAKERLNMQ LRPL >gi|296918719|gb|GG772981.1| GENE 169 170938 - 171624 417 228 aa, chain + ## HITS:1 COG:yaiS KEGG:ns NR:ns ## COG: yaiS COG2120 # Protein_GI_number: 16128349 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Escherichia coli K12 # 55 190 1 136 136 265 94.0 7e-71 MECHKVDKVLDSAILSSANKRKGILAIGAHPDDIELGCGASLARLAQKGIYIATVVMTTG NSGVDGIIDRHEESRNALKILGCHQTIHLNFADTRAHLQLNDMISALENIIKNQIPSDVE IIRVYTMHDADRHQDHLAVYQASMVACRAIPQILGYETPSTWLSFMPQVFESVKEEYFSL KLTALKKHKSQSQRDYMRPERLRAVAQFRGQQVNSDLGEGFVIHKMIL >gi|296918719|gb|GG772981.1| GENE 170 171658 - 172153 272 165 aa, chain + ## HITS:1 COG:yaiP KEGG:ns NR:ns ## COG: yaiP COG1215 # Protein_GI_number: 16128348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 165 9 173 398 349 98.0 1e-96 MAVAILLWFLSTLRRKPSQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCRVICVNDGS TDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADTYVPPDQDG MGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVKLPMIVMKR Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:35:04 2011 Seq name: gi|296918718|gb|GG772982.1| Escherichia coli MS 110-3 genomic scaffold Scfld14, whole genome shotgun sequence Length of sequence - 83556 bp Number of predicted genes - 76, with homology - 76 Number of transcription units - 48, operones - 17 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 116 - 1651 1587 ## COG0531 Amino acid transporters + Term 1677 - 1711 5.2 + Prom 1669 - 1728 1.6 2 1 Op 2 . + CDS 1947 - 3101 881 ## COG1649 Uncharacterized protein conserved in bacteria + Term 3119 - 3167 11.5 3 2 Tu 1 . + CDS 3668 - 6067 2052 ## COG2202 FOG: PAS/PAC domain + Term 6081 - 6106 -0.5 4 3 Tu 1 . - CDS 6257 - 6688 542 ## COG1764 Predicted redox protein, regulator of disulfide bond formation - Prom 6872 - 6931 7.0 + Prom 6764 - 6823 6.4 5 4 Op 1 . + CDS 7033 - 7248 303 ## APECO1_616 biofilm-dependent modulation protein 6 4 Op 2 . + CDS 7350 - 7487 230 ## PROTEIN SUPPORTED gi|15801657|ref|NP_287675.1| 30S ribosomal subunit S22 + Term 7510 - 7561 8.4 + Prom 7502 - 7561 4.3 7 5 Tu 1 . + CDS 7643 - 9340 1902 ## COG0281 Malic enzyme + Term 9347 - 9382 6.5 + Prom 9354 - 9413 4.0 8 6 Tu 1 . + CDS 9474 - 10484 984 ## COG1064 Zn-dependent alcohol dehydrogenases + Term 10494 - 10533 3.3 9 7 Tu 1 . - CDS 10404 - 10574 58 ## gi|293414829|ref|ZP_06657472.1| predicted protein - Prom 10620 - 10679 2.0 + Prom 10537 - 10596 2.8 10 8 Op 1 6/0.059 + CDS 10676 - 10948 77 ## COG3549 Plasmid maintenance system killer protein 11 8 Op 2 . + CDS 10948 - 11232 309 ## COG3093 Plasmid maintenance system antidote protein + Term 11416 - 11447 0.0 - Term 11399 - 11440 6.4 12 9 Op 1 12/0.000 - CDS 11461 - 12114 843 ## COG2864 Cytochrome b subunit of formate dehydrogenase 13 9 Op 2 16/0.000 - CDS 12107 - 12991 981 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 14 9 Op 3 5/0.059 - CDS 13004 - 15415 2664 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 15 9 Op 4 . - CDS 15464 - 16051 639 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 16237 - 16296 6.2 + Prom 16052 - 16111 4.2 16 10 Tu 1 . + CDS 16340 - 17164 720 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 17209 - 17268 4.5 17 11 Op 1 10/0.000 + CDS 17437 - 18825 926 ## COG2223 Nitrate/nitrite transporter 18 11 Op 2 13/0.000 + CDS 18920 - 22660 4065 ## COG5013 Nitrate reductase alpha subunit 19 11 Op 3 12/0.000 + CDS 22657 - 24201 1407 ## COG1140 Nitrate reductase beta subunit 20 11 Op 4 12/0.000 + CDS 24201 - 24896 788 ## COG2180 Nitrate reductase delta subunit 21 11 Op 5 4/0.235 + CDS 24893 - 25573 576 ## COG2181 Nitrate reductase gamma subunit 22 11 Op 6 . + CDS 25653 - 26546 793 ## COG0384 Predicted epimerase, PhzC/PhzF homolog 23 12 Tu 1 . - CDS 26642 - 27487 643 ## COG2162 Arylamine N-acetyltransferase - Prom 27622 - 27681 3.3 24 13 Tu 1 . + CDS 27770 - 28231 353 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 25 14 Op 1 . - CDS 28548 - 28763 217 ## ECS88_1556 hypothetical protein 26 14 Op 2 . - CDS 28841 - 28984 118 ## COG5433 Transposase - Prom 29009 - 29068 3.8 27 15 Tu 1 . - CDS 29097 - 29564 -112 ## ECED1_1612 hypothetical protein - Prom 29597 - 29656 6.5 28 16 Tu 1 . - CDS 29935 - 30162 105 ## ECED1_1611 putative zinc-dependent metallopeptidase - Prom 30289 - 30348 2.9 29 17 Op 1 2/0.647 - CDS 30686 - 33091 1186 ## COG3501 Uncharacterized protein conserved in bacteria 30 17 Op 2 . - CDS 33110 - 33394 212 ## COG4104 Uncharacterized conserved protein - Prom 33473 - 33532 1.8 - Term 33812 - 33847 -0.2 31 18 Op 1 2/0.647 - CDS 33935 - 34345 302 ## COG0625 Glutathione S-transferase 32 18 Op 2 . - CDS 34359 - 34535 213 ## COG0625 Glutathione S-transferase - Prom 34556 - 34615 4.1 + Prom 34630 - 34689 3.8 33 19 Tu 1 . + CDS 34802 - 36301 1447 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 36466 - 36509 2.4 - Term 36298 - 36330 2.1 34 20 Tu 1 . - CDS 36441 - 37502 1310 ## COG3391 Uncharacterized conserved protein - Prom 37658 - 37717 6.3 + Prom 37656 - 37715 3.4 35 21 Tu 1 . + CDS 37744 - 39846 1302 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 39857 - 39887 2.1 - Term 39673 - 39703 -0.5 36 22 Tu 1 . - CDS 39884 - 40120 131 ## COG1802 Transcriptional regulators - Prom 40301 - 40360 2.9 + Prom 40237 - 40296 3.1 37 23 Op 1 4/0.235 + CDS 40327 - 40845 532 ## COG1247 Sortase and related acyltransferases 38 23 Op 2 . + CDS 40842 - 41291 377 ## COG3238 Uncharacterized protein conserved in bacteria 39 24 Op 1 . - CDS 41292 - 41525 352 ## G2583_1807 hypothetical protein 40 24 Op 2 . - CDS 41611 - 41859 143 ## SDY_1729 hypothetical protein - Prom 41936 - 41995 3.1 41 25 Op 1 5/0.059 - CDS 42171 - 43595 1418 ## COG1012 NAD-dependent aldehyde dehydrogenases 42 25 Op 2 36/0.000 - CDS 43617 - 44411 701 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 43 25 Op 3 30/0.000 - CDS 44401 - 45342 1052 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 44 25 Op 4 13/0.000 - CDS 45343 - 46356 981 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 45 25 Op 5 3/0.412 - CDS 46374 - 47519 1152 ## COG0687 Spermidine/putrescine-binding periplasmic protein - Prom 47619 - 47678 3.3 46 26 Op 1 2/0.647 - CDS 47764 - 49170 1102 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 47 26 Op 2 . - CDS 49249 - 49446 79 ## COG1598 Uncharacterized conserved protein - Prom 49597 - 49656 4.6 + Prom 49465 - 49524 2.6 48 27 Tu 1 . + CDS 49724 - 49894 213 ## ECS88_1530 hypothetical protein 49 28 Op 1 3/0.412 - CDS 49986 - 51947 1695 ## COG0826 Collagenase and related proteases - Term 51959 - 51989 1.1 50 28 Op 2 . - CDS 52020 - 52556 358 ## COG1396 Predicted transcriptional regulators 51 29 Tu 1 . + CDS 52648 - 53820 932 ## COG3135 Uncharacterized protein involved in benzoate metabolism 52 30 Tu 1 . - CDS 53895 - 54563 706 ## ECO103_1562 putative lipoprotein - Prom 54783 - 54842 4.3 - Term 54784 - 54822 -0.8 53 31 Op 1 4/0.235 - CDS 54866 - 55459 689 ## COG0500 SAM-dependent methyltransferases 54 31 Op 2 . - CDS 55456 - 56448 882 ## COG1275 Tellurite resistance protein and related permeases - Prom 56622 - 56681 4.1 + Prom 56432 - 56491 6.6 55 32 Tu 1 . + CDS 56572 - 57552 685 ## ECS88_1523 enzyme 56 33 Op 1 1/0.882 - CDS 57544 - 58083 923 ## PROTEIN SUPPORTED gi|16129386|ref|NP_415944.1| ribosomal-protein-L7/L12-serine acetyltransferase - Term 58107 - 58135 1.3 57 33 Op 2 . - CDS 58146 - 58370 233 ## COG2841 Uncharacterized protein conserved in bacteria + Prom 58193 - 58252 3.8 58 34 Tu 1 . + CDS 58386 - 58589 84 ## ECS88_1520 hypothetical protein 59 35 Tu 1 . - CDS 58510 - 60129 1480 ## COG3131 Periplasmic glucans biosynthesis protein - Prom 60244 - 60303 3.9 60 36 Tu 1 . - CDS 60390 - 61733 940 ## COG5383 Uncharacterized protein conserved in bacteria - Prom 61790 - 61849 4.5 + Prom 61846 - 61905 5.4 61 37 Tu 1 . + CDS 61950 - 62873 480 ## COG0583 Transcriptional regulator + Term 62882 - 62911 0.5 - Term 62712 - 62753 -0.7 62 38 Tu 1 . - CDS 62911 - 63366 283 ## COG0840 Methyl-accepting chemotaxis protein 63 39 Tu 1 . - CDS 63539 - 63712 99 ## ECS88_1514 hypothetical protein - Prom 63836 - 63895 6.0 64 40 Tu 1 . - CDS 63957 - 64487 261 ## COG3038 Cytochrome B561 - Prom 64512 - 64571 2.1 + Prom 64471 - 64530 6.0 65 41 Tu 1 . + CDS 64676 - 65677 1109 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 65686 - 65719 4.4 66 42 Tu 1 . - CDS 65719 - 67158 1357 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 67267 - 67326 5.0 67 43 Tu 1 . - CDS 67355 - 68155 528 ## COG1434 Uncharacterized conserved protein - Prom 68350 - 68409 4.3 68 44 Tu 1 . - CDS 68428 - 72330 4191 ## COG1643 HrpA-like helicases - Prom 72377 - 72436 2.3 + Prom 72322 - 72381 4.0 69 45 Tu 1 . + CDS 72531 - 73136 784 ## COG1182 Acyl carrier protein phosphodiesterase 70 46 Op 1 5/0.059 - CDS 73190 - 74482 470 ## COG0671 Membrane-associated phospholipid phosphatase 71 46 Op 2 3/0.412 - CDS 74496 - 76253 1187 ## COG0500 SAM-dependent methyltransferases 72 46 Op 3 4/0.235 - CDS 76269 - 77165 159 ## COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 73 46 Op 4 . - CDS 77165 - 77770 200 ## COG0558 Phosphatidylglycerophosphate synthase - Prom 77852 - 77911 4.3 - Term 78021 - 78060 6.2 74 47 Tu 1 . - CDS 78069 - 78929 779 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 79055 - 79114 6.3 - Term 79089 - 79126 5.2 75 48 Op 1 . - CDS 79149 - 81140 1575 ## APECO1_557 EntS/YbdA MFS transporter 76 48 Op 2 . - CDS 81200 - 83554 1188 ## APECO1_557 EntS/YbdA MFS transporter Predicted protein(s) >gi|296918718|gb|GG772982.1| GENE 1 116 - 1651 1587 511 aa, chain + ## HITS:1 COG:xasA KEGG:ns NR:ns ## COG: xasA COG0531 # Protein_GI_number: 16129451 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 511 1 511 511 891 99.0 0 MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLC AAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKW PALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLH SGAPVAIEMDAKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLL LMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLG VLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTG GGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGL LTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHDRKSKANTGVTLE PINSQNAPKGHFFLHPRARSPHYIVMNDKKH >gi|296918718|gb|GG772982.1| GENE 2 1947 - 3101 881 384 aa, chain + ## HITS:1 COG:ECs2096 KEGG:ns NR:ns ## COG: ECs2096 COG1649 # Protein_GI_number: 15831350 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 384 56 439 439 759 99.0 0 MRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLGINTVFFQVKPDGT ALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSVNTKPGTIR ELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRYPVDGVQFD DYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPEVEFGVSP AGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLDYIAPQIYWPFSRSAARYDVLA KWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMINGGVPELKKQLDLNDAVPEISGTIL FREDYLNKPQTQQAVSYLQSRWGS >gi|296918718|gb|GG772982.1| GENE 3 3668 - 6067 2052 799 aa, chain + ## HITS:1 COG:ECs2094_1 KEGG:ns NR:ns ## COG: ECs2094_1 COG2202 # Protein_GI_number: 15831348 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 701 99.0 0 MKLTDADTAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKVWTRFALSKVSAEGKVYYLA LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCINEASGMQ PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM PIHWASSSHGAEVQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS LGYAWADQALLEVVNRFREKLKPDQYLCRIEGASFVLVSLENDVSNITQIADELRNVVSK PIMIDDKPFPLTLSIGISYDEGKNRDYLLSTAHNAMDFIRKNGGNGWQFFSPAMNEMVKE RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWYDPLHGHVPPSRFIPLAEE IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID GHQLTVEITESMMMEHDTEIFKRIQILRDMGIGLSVDDFGTGFSGLSRLVSLPVTEIKID KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGIETKEQFEMLRKIHCRVIQGYFFSR PLPAEEIPGWMSSVLPLKI >gi|296918718|gb|GG772982.1| GENE 4 6257 - 6688 542 143 aa, chain - ## HITS:1 COG:osmC KEGG:ns NR:ns ## COG: osmC COG1764 # Protein_GI_number: 16129441 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli K12 # 1 143 1 143 143 270 99.0 4e-73 MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEKGTNPEELIGAAHAACF SMALSLMLGEAGFTPTSIDTTADVSLDRVDAGFAITKIALKSEVAVPGIDASTFDGIIQK AKAGCPVSQVLKAEITLDYQLKS >gi|296918718|gb|GG772982.1| GENE 5 7033 - 7248 303 71 aa, chain + ## HITS:1 COG:no KEGG:APECO1_616 NR:ns ## KEGG: APECO1_616 # Name: not_defined # Def: biofilm-dependent modulation protein # Organism: E.coli_APEC # Pathway: not_defined # 1 71 22 92 92 133 100.0 2e-30 MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWVEASDNDILSDIYQQTI NYVVSGQHPTL >gi|296918718|gb|GG772982.1| GENE 6 7350 - 7487 230 45 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15801657|ref|NP_287675.1| 30S ribosomal subunit S22 [Escherichia coli O157:H7 EDL933] # 1 45 1 45 45 93 100 4e-18 MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAEK >gi|296918718|gb|GG772982.1| GENE 7 7643 - 9340 1902 565 aa, chain + ## HITS:1 COG:sfcA KEGG:ns NR:ns ## COG: sfcA COG0281 # Protein_GI_number: 16129438 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Escherichia coli K12 # 1 565 10 574 574 1141 99.0 0 MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERA WIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYR RSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYT ACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVF LGAGSAGCGIAEMIIAQTQREGLSEEAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRE NLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPT SRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGAS RITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVKTS AEALQQAIDDNFWHAEYRDYRRTSI >gi|296918718|gb|GG772982.1| GENE 8 9474 - 10484 984 336 aa, chain + ## HITS:1 COG:ZadhP KEGG:ns NR:ns ## COG: ZadhP COG1064 # Protein_GI_number: 15801659 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli O157:H7 EDL933 # 1 336 11 346 346 602 99.0 1e-172 MKAAVVTKDHHVDVTDKTLRSLKHGEALLKMECCGVCHTDLHVKNGDFGDKTGVILGHEG IGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETLCRSVKNAGYSVDGGMAEE CIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKIRPGQWIAIYGLGGLGNLALQY AKNVFNAKVIAIDVNDEQLKLATEMGADLAINSRTEDAARIVQEKAGGAHAAVVTAVAKA AFNSAVDAVRAGGRVVAVGLPPESMSLDIPRLVLDGIEVVGSLVGTRQDLTEAFQFAAEG KVVPKVALRPLADINTIFTEMEEGKIRGRMVIDFRR >gi|296918718|gb|GG772982.1| GENE 9 10404 - 10574 58 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293414829|ref|ZP_06657472.1| ## NR: gi|293414829|ref|ZP_06657472.1| predicted protein [Escherichia coli B185] predicted protein [Escherichia coli B185] # 1 56 1 56 56 90 92.0 4e-17 MGEEKKKSEIAESVSQNRLRPEHGSRSKDLLATEINHHTATDFAFFHLGKYGVDVR >gi|296918718|gb|GG772982.1| GENE 10 10676 - 10948 77 90 aa, chain + ## HITS:1 COG:XF0721 KEGG:ns NR:ns ## COG: XF0721 COG3549 # Protein_GI_number: 15837323 # Func_class: R General function prediction only # Function: Plasmid maintenance system killer protein # Organism: Xylella fastidiosa 9a5c # 2 90 16 105 105 84 43.0 6e-17 MNFRHKGLRDLFLLGKTSGVIPTQVKRLRHRLAVIDAACCLADIDMPGYRLHPLSGDRDG IWAISVSGNWRITFEFVNGDAYILDYEDYH >gi|296918718|gb|GG772982.1| GENE 11 10948 - 11232 309 94 aa, chain + ## HITS:1 COG:yddM KEGG:ns NR:ns ## COG: yddM COG3093 # Protein_GI_number: 16129436 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Escherichia coli K12 # 1 94 27 120 120 169 100.0 1e-42 MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVI GSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ >gi|296918718|gb|GG772982.1| GENE 12 11461 - 12114 843 217 aa, chain - ## HITS:1 COG:STM1568 KEGG:ns NR:ns ## COG: STM1568 COG2864 # Protein_GI_number: 16764912 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 217 1 217 218 406 97.0 1e-113 MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFF GIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSI MSMIFVLLVTGVIIWRPYFAQYFPIQVVRYSLLIHAAAGIILIHAILIHMYMAFWVKGSI KGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGL >gi|296918718|gb|GG772982.1| GENE 13 12107 - 12991 981 294 aa, chain - ## HITS:1 COG:fdnH KEGG:ns NR:ns ## COG: fdnH COG0437 # Protein_GI_number: 16129434 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 294 1 294 294 607 99.0 1e-173 MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVG HCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQ YANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCP TGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEGVGGTHVMYVLHHADQPELYHGL PKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHYIGIGPNKEVDDDEEGNHE >gi|296918718|gb|GG772982.1| GENE 14 13004 - 15415 2664 803 aa, chain - ## HITS:1 COG:ECs2078 KEGG:ns NR:ns ## COG: ECs2078 COG0243 # Protein_GI_number: 15831332 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 803 213 1015 1015 1669 99.0 0 MTNHWVDIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIY APIRSGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQ YDKSSWNYQFDENGYAKRDDTLTHPRCVWNLLKAHVSRYTPDVVENICGTPKADFLKVCE VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLADQVNYWSNYPKFFVSLMKSF YGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDKNKVVSC LSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDGSIANSGRW LQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNYKQPHEPQSDE VAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYTGSWTEQGNQMAN RDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLIQWNGSKWTGNDIPD FGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETPLGTNPLHPNVVSNPVV RLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIAQPEQFVEISETLAAAKGI ANGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGIPIHWGFEGVARKGYIANTLT PNVGDANSQTPEYKAFLVNIEKA >gi|296918718|gb|GG772982.1| GENE 15 15464 - 16051 639 195 aa, chain - ## HITS:1 COG:fdnG KEGG:ns NR:ns ## COG: fdnG COG0243 # Protein_GI_number: 16129433 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 195 1 195 1015 412 100.0 1e-115 MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAKEIRNTCTYCSVGCGLL MYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYVNSENRLRYPEYRAPGSDK WQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLSTGMLCASGASNETGMLTQKF ARSLGMLAVDNQARV >gi|296918718|gb|GG772982.1| GENE 16 16340 - 17164 720 274 aa, chain + ## HITS:1 COG:ECs2077 KEGG:ns NR:ns ## COG: ECs2077 COG0697 # Protein_GI_number: 15831331 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 274 20 293 293 474 99.0 1e-134 MVGLIRGVSEGLGPVGGAAAIYSLSGLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICL ALSLGYAATRHQAIEVGMVNYLWPSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGG DNGLHYDQIINNITTSPLSYFLAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWV YYFLTPQPEMVFSTPVMIKLISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSAL AAVLLSAPLSFSFWQGALMVCGGSLLCWLATRRG >gi|296918718|gb|GG772982.1| GENE 17 17437 - 18825 926 462 aa, chain + ## HITS:1 COG:narU KEGG:ns NR:ns ## COG: narU COG2223 # Protein_GI_number: 16129428 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Escherichia coli K12 # 1 462 1 462 462 777 99.0 0 MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNL NKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIA VQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGA IARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAG LGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQ AFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK >gi|296918718|gb|GG772982.1| GENE 18 18920 - 22660 4065 1246 aa, chain + ## HITS:1 COG:narZ KEGG:ns NR:ns ## COG: narZ COG5013 # Protein_GI_number: 16129427 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Escherichia coli K12 # 1 1246 1 1246 1246 2581 98.0 0 MSKLLDRFRYFKQKGETFADGHGQVMHSNRDWEDSYRQRWQFDKIVRSTHGVNCTGSCSW KIYVKNGLVTWEIQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLIRKRLIE LWREALKQHSDPVLAWASIMNDPQKSLSYKQVRGRGGFIRSNWQELNQLIAAANVWTIKT YGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFYDWYCDLPPASPMTWGEQTDVPE SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTIAITPDYSEVAKLCDQWLAPKQ GTDSALAMAMGHVILKEFHLDNPSDYFINYCRRYSDMPMLVMLEPRDDGSYVPGRMVRAS DLVDGLGESNNPQWKTVAVNTAGELVVPNGSIGFRWGEKGKWNLESIAAGTETELSLTLL GQHDAVAGVAFPYFGGIENPHFRSVKHNPVLVRQLPVKNLTLADGSTCPVVSVYDLVLAN YGLDRGLEDENSAKDYAEIKPYTPAWGEQITGVPRQYIETIAREFADTAHKTHGRSMIIL GAGVNHWYHMDMNYRGMINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWLPLAFALDWNR PPRQMNSTSFFYNHSSQWRYEKVTAQELLSPLADASKYSGHLIDFNVRAERMGWLPSAPQ LGRNPLSLKAEADKAGLSPAEFTVQALKSGELRMACEQPDNGSNHPRNLFVWRSNLLGSS GKGHEYMQKYLLGTKSGIQGEELGPTEGIQPEEVEWQTAAIEGKLDLLVTLDFRMSSTCL FSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESRSDWEIYKGIAKAFSQVCIGH LGKETDVVLQPLLHDSPAELSQPCEVLDWRKGECDLIPGKTAPNIVAVERDYPATYERFT SLGPLMDKLGNGGKGISWNTQDEIDFLGKLNYTKRDGPAKGRPLIDTAIDASEVILALAP ETNGHVAVKAWQALGEITGREHTHLALHKEDEKIRFRDIQAQPRKIISSPTWSGLESDHV SYNAGYTNVHELIPWRTLSGRQQLYQDHPWMRAFGESLVAYRPPIDTRSVSEMRQIPPNG FPEKALNFLTPHQKWGIHSTYSENLLMLTLSRGGPIVWLSETDARELTIVDNDWVEVFNA NGALTARAVVSQRVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSVTRVCPKPTHMIGG YAQLAWGFNYYGTVGSNRDEFIMIRKMKNVNWLDDEGRDQVQEAKK >gi|296918718|gb|GG772982.1| GENE 19 22657 - 24201 1407 514 aa, chain + ## HITS:1 COG:ECs2070 KEGG:ns NR:ns ## COG: ECs2070 COG1140 # Protein_GI_number: 15831324 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 1099 99.0 0 MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTGREGMEYAWFNNVETKPGIGYPKNWEDQE EWQGGWVRDVNGKIRPRLGSKMGVITKIFANPVVPQIDDYYEPFTFDYEHLHSAPEGKHI PTARPRSLIDGKRMDKVIWGPNWEELLGGEFEKRARDRNFEAMQKEMYGQFENTFMMYLP RLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRGWRLCISGCPYKKIYFNWKSGKS EKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYDADRIEEAASTEREVDLYERQCEVFL DPHDPSVIEEALKQGIPQNVIDAAQRSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSP IQSYADAGGLPKSEGVLPAIESLRIPVQYLANMLSAGDTGPVLRALKRMMAMRHYMRSQT VEGVTDTRAIDEVGLSVAQVEEMYRYLAIANYEDRFVIPTSHREMAGDAFAERNGCGFTF GDGCHGSDSKFNLFNSSRIDAINITEVRDKAEGE >gi|296918718|gb|GG772982.1| GENE 20 24201 - 24896 788 231 aa, chain + ## HITS:1 COG:narW KEGG:ns NR:ns ## COG: narW COG2180 # Protein_GI_number: 16129425 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Escherichia coli K12 # 1 231 1 231 231 423 95.0 1e-118 MQILKVIGLLMEYPDELLWECKDDALALIRRDAPMLTDFALDLLNAPLLDKQAEWCEVFD RGRTTSLLLFEHVHAESRDRGQAMVDLLAEYEKVGLQLNCRELPDYLPLYLEYLSVLPDD QAKEGLLNVAPILALLGGRLKQREAPWYALFDALLQLAGSPLSSDSVIKQIRSEERDDTH QALDAVWEEEQVKFIEDNATACDSSPLNQYQRRFSQDVAPQYVDISAGGGK >gi|296918718|gb|GG772982.1| GENE 21 24893 - 25573 576 226 aa, chain + ## HITS:1 COG:STM1580 KEGG:ns NR:ns ## COG: STM1580 COG2181 # Protein_GI_number: 16764924 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Salmonella typhimurium LT2 # 1 226 1 226 226 387 88.0 1e-107 MIQYLNVFFYDIYPYLCGTVFILGSWLRYDHGQYTWRAASSQMLDKRGMVLWSNLFHIGI LGIFFGHLFGMLTPHWMYAWFLPVAVKQQMAMILGGICGVLTLIGGAGLLVRRLTNPRIR ATSSGADILILAILLIQCILGLTTIPFSAQHPDGSEMMKLVGWAQSIVTFQGGASTHLDG VAFIFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRSRR >gi|296918718|gb|GG772982.1| GENE 22 25653 - 26546 793 297 aa, chain + ## HITS:1 COG:yddE KEGG:ns NR:ns ## COG: yddE COG0384 # Protein_GI_number: 16129423 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Escherichia coli K12 # 1 297 1 297 297 587 96.0 1e-167 MKPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGHSETAFLLHSDDSDVRI RYFTPTVEVPICGHATVAAHYVRAKVLGLGNCTVWQTSLAGKHRVTIEKQNDDYRISLEQ GTPGFEPPLTGETRAAIINALHLTEDDILQGLPIQVATTGHSKVMIPLKPEVDIDALSPD LAALTAISKQIGCNGFFPFQIRPGKSETDGRMFSPAIGIVEDPVTGNANGPMGAWLVHHN VLSHDGNVLRVKGHQGRALGRDGVIDVTVTIRDNQPEKVTISGAAVILFHAEWAIEL >gi|296918718|gb|GG772982.1| GENE 23 26642 - 27487 643 281 aa, chain - ## HITS:1 COG:nhoA KEGG:ns NR:ns ## COG: nhoA COG2162 # Protein_GI_number: 16129422 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Arylamine N-acetyltransferase # Organism: Escherichia coli K12 # 1 281 1 281 281 549 96.0 1e-156 MTPILNHYFARINWLGAAAANIDTLRALHLKHNCTIPFENLDVLLPREIQLDDQSLEDKL VIARRGGYCFEQNGVFERVLRELGFNVRSLLGRVVLSNPPALPPRTHRLLLVELEGEKWI ADVGFGGQTLTAPIRLMPDIMQTTPHGEYRLLQEGDDWVLQFNHHQHWQSMYRFDLCEQQ QSDYVMGNFWSAHWPQSHFRHHLLMCRHLPDGGKLTLTNFHFTHYENGHAVEQRNLPDVA SLYAVMQEQFGLGVDDAKHGFTVDELALVMAAFDTHPEAGK >gi|296918718|gb|GG772982.1| GENE 24 27770 - 28231 353 153 aa, chain + ## HITS:1 COG:yddH KEGG:ns NR:ns ## COG: yddH COG1853 # Protein_GI_number: 16129421 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli K12 # 1 153 53 205 205 310 97.0 7e-85 MAAAWSMPVEFEPPRVAIVVDKSTWTRELIERNGKFGIVIPGVAATNWTWAVGSVSGREE DKFNCYGIPVVRGPVLGLPLVEEKCLAWMECRLLPATSAQEKYDTLFGEVVSAAADARVF VEGRWQFDDDKLNTLHHLGAGTFVTSGKRVTAG >gi|296918718|gb|GG772982.1| GENE 25 28548 - 28763 217 71 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1556 NR:ns ## KEGG: ECS88_1556 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 71 1 71 71 140 100.0 1e-32 MFIRPVKPSDVEPLMDMLLDRDQFDQDGLHHVQKTLTHYFSGQSADLWFSAEHLGLAGIA YCASEMMTNDV >gi|296918718|gb|GG772982.1| GENE 26 28841 - 28984 118 47 aa, chain - ## HITS:1 COG:ydcC KEGG:ns NR:ns ## COG: ydcC COG5433 # Protein_GI_number: 16129419 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 47 161 207 378 86 87.0 1e-17 MLDIKGEIITTDAMGCQKDIAEKIQKQGGNYLFAVKGHKERINKAFE >gi|296918718|gb|GG772982.1| GENE 27 29097 - 29564 -112 155 aa, chain - ## HITS:1 COG:no KEGG:ECED1_1612 NR:ns ## KEGG: ECED1_1612 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 155 107 261 261 286 98.0 2e-76 MKVKDGKGDEYDAICKKPFRINSGNITLDYLGGSCPFEINTNPERWNTIKLGRSFLLSIT LNDMYAFIPGDNYYFIKSSGYKFVNDKWFTLKSINNIFLYFLNLKINCADDFFDINNFTT CNNLLLDEKNTFLLISYGQLRMKKILFTSPLMKFL >gi|296918718|gb|GG772982.1| GENE 28 29935 - 30162 105 75 aa, chain - ## HITS:1 COG:no KEGG:ECED1_1611 NR:ns ## KEGG: ECED1_1611 # Name: not_defined # Def: putative zinc-dependent metallopeptidase # Organism: E.coli_ED1a # Pathway: not_defined # 1 75 191 265 275 136 100.0 3e-31 MWSQDYTTTDKYSTCKEDEVSYDEHIRIATKLISKQKDQIFENAYNIERYFEIRLIESEI DSIDDEILSNSVKKK >gi|296918718|gb|GG772982.1| GENE 29 30686 - 33091 1186 801 aa, chain - ## HITS:1 COG:Z0267 KEGG:ns NR:ns ## COG: Z0267 COG3501 # Protein_GI_number: 15799916 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 5 576 4 577 713 695 60.0 0 MSLKGLRFTLEVDGQEPDTFAVVNFRLIQNQSYPFVMSVDVASDSFMQTAEMLLEKNATL TIWQGVIPLRYVTGVVAGFGMQENNGWQMRYHLRIEPPLWRCGLRRNFRIFQQQDIRTIS ATLLNENGVTEWTPLFYEDHPAREFCVQYGESDLAFLARLWAEEGIFFFERFAADSPEQK LTLCDDVAGLSQAGELPFNPDTSAGAETECVSMFRYEAHVRPSSVQSQDYTFKVPDWPGM YEQQGESLNGQLEQYEIFDYPGRYKDEQHGKDFTLYRMESLRSDAEKATGQSNSPKLWPG TWFTLTGHPQKMLNREWQVVQSILSGDQPQALHGSQGRGTTLGNQLEVIPADRTWRPRLQ SKPKVDGPQSAIVTGPAGEEIFCDEHGRVRVKFHWDRYHGMTEESSCWVRVSQAWAGPGF GNLAIPRVGQEVIVDFLNGDPDQPLVMGRTYHEDNRSPGDLPGTKTQMTIRSKTYKGSGF NELRFEDATDKEQVYIHAQKNMDTEVLNDRTTDVKHDHTETIGNDQKITVVKGQTVQVGT RKEGGHDQSITVANDRCITVRNDQTLQVTNDRTVSVSNDDGLYVRNDRKVTVEGKQEHKT TGNHVSLVEGKHSLVVKGDLARKVSGALGIKVDGDIVLESSSRISLKVGGSFVVIHSGGV DIVGPKISLNSGGSPGTPVPALQPTVLKTLGDEKSGDGSDSGEENEDSGGNCVTGSGGDD RGDDEDEPEKYTLQFHFTDDDGIPYSETRYIAFFEDGTQTHGETDEEGYTERFFVSSKHE IKVKLLFANDDFLSMEGHYGR >gi|296918718|gb|GG772982.1| GENE 30 33110 - 33394 212 94 aa, chain - ## HITS:1 COG:VCA0284 KEGG:ns NR:ns ## COG: VCA0284 COG4104 # Protein_GI_number: 15601050 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 1 94 1 94 176 103 60.0 9e-23 MPLAAKLTDKGTQHDGYYETVITAGSSTVFIDGLPAARQGDPLTPHAKPKHPPHPRKIAR GSSTVFIDGLPAARTGDAIDCGGVVIGGGTVNIG >gi|296918718|gb|GG772982.1| GENE 31 33935 - 34345 302 136 aa, chain - ## HITS:1 COG:ECs2058 KEGG:ns NR:ns ## COG: ECs2058 COG0625 # Protein_GI_number: 15831312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 136 64 205 205 258 88.0 2e-69 MTETAAIALMVLDRRPDLAPPLGRAERQQFQRLLVWLVANVYPTFTFADYPKRWASDAPV IEYRKSLYIWLNSQLTAEPYVFGEQLTLVDCYLCTMRTWGPGHEWFQDNAPNINAIADAV CQIPKLQEVLKRNVII >gi|296918718|gb|GG772982.1| GENE 32 34359 - 34535 213 58 aa, chain - ## HITS:1 COG:ECs2058 KEGG:ns NR:ns ## COG: ECs2058 COG0625 # Protein_GI_number: 15831312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 58 1 58 205 121 98.0 3e-28 MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGTSRDLLKTLNPLCQVPTLAL >gi|296918718|gb|GG772982.1| GENE 33 34802 - 36301 1447 499 aa, chain + ## HITS:1 COG:ECs2057 KEGG:ns NR:ns ## COG: ECs2057 COG1113 # Protein_GI_number: 15831311 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 499 18 516 516 916 99.0 0 MSKHNTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAG PALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAM TGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLA IVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVG TAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGV PYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKMSRQHVPYAGILATL VVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADVSFKLP GAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIAALPIIGILLVIGWFGVRKRVAEIHSTAP VVEEDEEKQEIVFKPETSS >gi|296918718|gb|GG772982.1| GENE 34 36441 - 37502 1310 353 aa, chain - ## HITS:1 COG:ECs2056 KEGG:ns NR:ns ## COG: ECs2056 COG3391 # Protein_GI_number: 15831310 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 618 98.0 1e-177 MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATS QSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGENIKLKTAI QNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT ANERAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVID AKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL >gi|296918718|gb|GG772982.1| GENE 35 37744 - 39846 1302 700 aa, chain + ## HITS:1 COG:yncD KEGG:ns NR:ns ## COG: yncD COG1629 # Protein_GI_number: 16129410 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli K12 # 1 700 1 700 700 1360 97.0 0 MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATP RINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVDGIPATMPDGQG QTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYG LKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDDASKLSLIFN SVDIKADDPGGLTEAEWKANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSAQDDMSVMMY AGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYEN MSENRKGYNNFRLNRGVPEYGQKGELRRDERNLMWNVDPYLQTQWQLTDKLSLDAGVRYS SVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNVYLAAGRGFETPTINELS YRADGQSGMNFGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRTTYK NAGKTRRQGAELAWDQRFAGDFRVKASWTWLDATYRSNVCNEQDCNGNRMPGIARNMAFA SIGYIPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVD NLFDKEYVGSVIVNESNGRYYEPAPGRNYGVGINIAWRFE >gi|296918718|gb|GG772982.1| GENE 36 39884 - 40120 131 78 aa, chain - ## HITS:1 COG:yncC KEGG:ns NR:ns ## COG: yncC COG1802 # Protein_GI_number: 16129409 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 11 66 71 126 240 88 87.0 2e-18 MLGSVLASAWRAGSLRLVSVNVLFVAPAQAFTVPEVGKRQLNEINRIRYELELMAVALAV ENLTMQKNVAMLCQQYSR >gi|296918718|gb|GG772982.1| GENE 37 40327 - 40845 532 172 aa, chain + ## HITS:1 COG:ECs2052 KEGG:ns NR:ns ## COG: ECs2052 COG1247 # Protein_GI_number: 15831306 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 355 100.0 3e-98 MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDG VVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLSRLIDEARDCGKHVMVAGI ESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQLQLDERTEPDAIG >gi|296918718|gb|GG772982.1| GENE 38 40842 - 41291 377 149 aa, chain + ## HITS:1 COG:ydcZ KEGG:ns NR:ns ## COG: ydcZ COG3238 # Protein_GI_number: 16129406 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 149 1 149 149 216 97.0 8e-57 MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLVGIVLFVSILWFKQGMA GFGELVSSVRWWTLIPGLLRSFFVFASISGYQNVGAATTIAVLVASQLIGGLVLDIFRSH GVPLRALIGPICGAILLVVGAWLVARRSF >gi|296918718|gb|GG772982.1| GENE 39 41292 - 41525 352 77 aa, chain - ## HITS:1 COG:no KEGG:G2583_1807 NR:ns ## KEGG: G2583_1807 # Name: ydcY # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 77 1 77 77 112 100.0 6e-24 MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQQQRLRTAIAHHGRKHK EDMEARHEQLTKGGTIL >gi|296918718|gb|GG772982.1| GENE 40 41611 - 41859 143 82 aa, chain - ## HITS:1 COG:no KEGG:SDY_1729 NR:ns ## KEGG: SDY_1729 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 82 1 82 82 134 100.0 1e-30 MKKLDARQKMTHICARFIHLAGRPYMSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFL SAFLVGATWPMSFPVALLFSLF >gi|296918718|gb|GG772982.1| GENE 41 42171 - 43595 1418 474 aa, chain - ## HITS:1 COG:ECs2048 KEGG:ns NR:ns ## COG: ECs2048 COG1012 # Protein_GI_number: 15831302 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 474 1 474 474 928 99.0 0 MQHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVNAAVRAADAAFAEWGQTTP KARAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT ALKLAELAKDIFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAPSI KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKL GAAVATLKSGSPDDESTELGPLSSLAHLERVSKAVEEAKATGHIKVITGGEKRKGNGYYY APTLLAGALQDDAIVQKEVFGPVVSVTLFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR VSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH >gi|296918718|gb|GG772982.1| GENE 42 43617 - 44411 701 264 aa, chain - ## HITS:1 COG:ydcV KEGG:ns NR:ns ## COG: ydcV COG1177 # Protein_GI_number: 16129402 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli K12 # 1 264 1 264 264 422 99.0 1e-118 MHSERAPFFLKLAAWGGVVFLHFPILIIAAYAFNTEDAAFSFPPQGLTLRWFSVAAQRSD ILDSVTLSLKVAALATLIALVLGTLAAAALWRRDFFGKNAISLLLLLPIALPGIVTGLAL LTAFKTINLEPGFFTIVVGHATFCVVVVFNNVIARFRRTSWSLVEASMDLGANGWQTFRY VVLPNLSSALLAGGMLAFALSFDEIIVTTFTAGHERTLPLWLLNQLGRPRDVPVTNVVAL LVMLVTTLPILGAWWLTREGDNGQ >gi|296918718|gb|GG772982.1| GENE 43 44401 - 45342 1052 313 aa, chain - ## HITS:1 COG:ECs2046 KEGG:ns NR:ns ## COG: ECs2046 COG1176 # Protein_GI_number: 15831300 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli O157:H7 # 1 313 1 313 313 503 99.0 1e-142 MAMNVLQSPSRPGLGKVPGFFWRNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFD DFTMSVTPELTLANIRALFNPANYDIIVRTLTMAVAVTIASAILAFPMAWYMARYTSGKM KAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGGNTL STSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPG IAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIVLIALY LAFVKRLGAFDAL >gi|296918718|gb|GG772982.1| GENE 44 45343 - 46356 981 337 aa, chain - ## HITS:1 COG:ydcT KEGG:ns NR:ns ## COG: ydcT COG3842 # Protein_GI_number: 16129400 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli K12 # 1 337 1 337 337 654 97.0 0 MTYAVEFDNVSRLYGDVRAVNGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGA ISIFGTPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALE KVALGFVQQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKL QQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNV FDGLMAEKLCGMTGSFALRPEHIRLNTPGEMQANGTIQAVQYQGAATRFELTLSGGEKLL VSQANMTGEELPATLTPGQQVMVSWSRDVMVALVEER >gi|296918718|gb|GG772982.1| GENE 45 46374 - 47519 1152 381 aa, chain - ## HITS:1 COG:ydcS KEGG:ns NR:ns ## COG: ydcS COG0687 # Protein_GI_number: 16129399 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 381 1 381 381 757 98.0 0 MSKTFARSSLCALSMTIMTAHAAEPPTNLENPEGRLDIIAWPGYIERGQTDKQYDWVTQF EKETGCAVNVKTAATSDEMVSLMVKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKA LDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYITKTFPTPPDSWQVVFVEQNLPDGKSNKG RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRDQHSLIHRYWHDTT VQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAY KWMNWSLTPKVQGDVAAWFGSLPVVPQGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAE GGKFVPYSRWTQDYIAIMGGR >gi|296918718|gb|GG772982.1| GENE 46 47764 - 49170 1102 468 aa, chain - ## HITS:1 COG:ydcR KEGG:ns NR:ns ## COG: ydcR COG1167 # Protein_GI_number: 16129398 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli K12 # 1 468 1 468 468 912 98.0 0 MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARP QSGYYVAPQAIKMPKATVIPVTRDEAVDINTYIFDMLQASRDPSVVPFASAFPDPRLFPL QQLNRSLAQVSKTATAMSVIENLPPGNVELRQAIARRYALQGITISPDEIVITAGALEAL NLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDIKEGIDLQALELALQEYPV KACWLMTNSQNPLGFTLTPQKKVRLVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWDR HDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQLALVDYLSTRRY DAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHNDSGYFLWLELPEPLDAGELSLVALT HHISIAPGNMFSTGENWSRFFRFNTAWQWGEREEQAVKQLGKLIQERL >gi|296918718|gb|GG772982.1| GENE 47 49249 - 49446 79 65 aa, chain - ## HITS:1 COG:ECs2042 KEGG:ns NR:ns ## COG: ECs2042 COG1598 # Protein_GI_number: 15831296 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 65 81 145 145 110 95.0 4e-25 MSVASKVLLLNAFLQSEITQQELARRIGKHKQEITRLFNLHHATKIDAVQLAANALGKEL SLVMV >gi|296918718|gb|GG772982.1| GENE 48 49724 - 49894 213 56 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1530 NR:ns ## KEGG: ECS88_1530 # Name: yncJ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 56 21 76 76 100 100.0 2e-20 MAGHKGHEFMWVKNVDHQLRHEADSDELRAVAEESAEGLREHFYWQKSRKPEAGQR >gi|296918718|gb|GG772982.1| GENE 49 49986 - 51947 1695 653 aa, chain - ## HITS:1 COG:ECs2039 KEGG:ns NR:ns ## COG: ECs2039 COG0826 # Protein_GI_number: 15831293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 653 15 667 667 1344 98.0 0 MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHR YGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCD IRTVEKAKFLSDVGFTQIVLARELNLEQLRAIHQATDATIEFFIHGALCVAYSGQCYISH AQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFK IEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYF VNARKGDIGAFDSPKFIGLPVGEVLKVAKDHIDVAVTEPLANGDGLNVMIKREVVGFRAN TVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQALTKTSSERRVAVDIELGGW QEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTIYYARNVQINLPG ALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAR EFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVN GDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDDLLKTLPKRKG >gi|296918718|gb|GG772982.1| GENE 50 52020 - 52556 358 178 aa, chain - ## HITS:1 COG:ECs2037 KEGG:ns NR:ns ## COG: ECs2037 COG1396 # Protein_GI_number: 15831292 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 178 1 178 178 358 97.0 3e-99 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN VPFSTFISPPQSATPSVYDPQRQAMVITSLFPYDPQLCFEHFSIQMAPGAISESTPHEKG VIEHVVVIDGQLDLCVDGEWQSLNCGEGVRFAADVTHVYRNGGEQTVHFHSLIHYPRS >gi|296918718|gb|GG772982.1| GENE 51 52648 - 53820 932 390 aa, chain + ## HITS:1 COG:ydcO KEGG:ns NR:ns ## COG: ydcO COG3135 # Protein_GI_number: 16129392 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in benzoate metabolism # Organism: Escherichia coli K12 # 1 390 88 477 478 628 97.0 1e-180 MRLFSIPPPTLLAGFLAVLIGYASSAAIIWQAAIVAGATTAQISGWMTALGLAMGVSTLA LTLWYRVPVLTAWSTPGAALLVTGLQGLTLNETIGVFIVTNVLIVLCGITGLFARLMRII PHSLAAAMLAGILLRFGLQAFASLDGQFTLCGSMLLAWLATRAVAPRYAVIAAMIIGIVI VIAQGDVVTTDVVFKPVLPTYIPPDFSFAHSLSVALPLFLVTMASQNAPGIAAMKAAGYS APVSPLIVFTGLLALVFSPFGVYSVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLI AGLFGSAITGMMAALPVSWIQMLAGLALLSTIGGSLYQALHNERERDAAVVAFLVTASGL TLFGIGSAFWGLIAGGVCYVVLNLIADRNR >gi|296918718|gb|GG772982.1| GENE 52 53895 - 54563 706 222 aa, chain - ## HITS:1 COG:no KEGG:ECO103_1562 NR:ns ## KEGG: ECO103_1562 # Name: ydcL # Def: putative lipoprotein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 222 1 222 222 434 100.0 1e-120 MRTTSFAKVAALCGLLALSGCASKITQPDKYSGFLNNYSDLKETTSATGKPVLRWVDPSF DQSKYDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMKEAIAQRKPLVTTAGPRSL IFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRLYFEGELIDAATNKPVI KVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK >gi|296918718|gb|GG772982.1| GENE 53 54866 - 55459 689 197 aa, chain - ## HITS:1 COG:tehB KEGG:ns NR:ns ## COG: tehB COG0500 # Protein_GI_number: 16129389 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 197 1 197 197 400 99.0 1e-112 MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDK NAMSIANVERIKSIENLDNLHTRVVDLNNLTFDGQYDFILSTVVLMFLEAKTIPGLIANM QRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERVKYNEDVGELHRTDA NGNRIKLRFATMLARKK >gi|296918718|gb|GG772982.1| GENE 54 55456 - 56448 882 330 aa, chain - ## HITS:1 COG:tehA KEGG:ns NR:ns ## COG: tehA COG1275 # Protein_GI_number: 16129388 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Escherichia coli K12 # 1 330 1 330 330 575 99.0 1e-164 MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQLWQVSHWLGDGLVILAMIIWGLLTGAFI TRLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFRPLAVCLFSFGVVVQLAYA AWQTAGLWRGSHPEEATTPGLYLPTVANNFISAMACGALGYTDAGLVFLGAGVFSWLSLE PVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSVNGGEGDTLAKMLFGYGLLQLLF MLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGSGSDNGFFHTLAVPLFIFTNFIIAI LLIRTFALLMQGKLLVRTERAVLMKAEDKE >gi|296918718|gb|GG772982.1| GENE 55 56572 - 57552 685 326 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1523 NR:ns ## KEGG: ECS88_1523 # Name: ydcK # Def: enzyme # Organism: E.coli_S88 # Pathway: not_defined # 1 326 1 326 326 641 100.0 0 MRKYRLSEEQRAFSYQEDGTKKSVLLRQIIAMSDFNDVIAGSAGGWIDHETVLAQEGNCW IYDQNAIAFGGTVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIRDSLV CGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRAKVSASRIVHQAQIYGDAVVRYA FIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDG DTIHVRGPKVINGEERITRTLLAGLL >gi|296918718|gb|GG772982.1| GENE 56 57544 - 58083 923 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16129386|ref|NP_415944.1| ribosomal-protein-L7/L12-serine acetyltransferase [Escherichia coli str. K-12 substr. MG1655] # 1 179 1 179 179 360 98 2e-98 MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVM LHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDESHQGQGIISQALQALIHH YAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAEFLNDAYDDVNLYARIIDSQ >gi|296918718|gb|GG772982.1| GENE 57 58146 - 58370 233 74 aa, chain - ## HITS:1 COG:ydcH KEGG:ns NR:ns ## COG: ydcH COG2841 # Protein_GI_number: 16129385 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 20 74 1 55 55 82 98.0 3e-16 MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKD EMLKILQQVSVKEV >gi|296918718|gb|GG772982.1| GENE 58 58386 - 58589 84 67 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1520 NR:ns ## KEGG: ECS88_1520 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 67 1 67 67 121 100.0 1e-26 MADKVYLKYTPSDYSFNLGKNASGIVFNQTAPPEEDAEEKTINSSRGHQHTDVYPALAGN TDTAMFH >gi|296918718|gb|GG772982.1| GENE 59 58510 - 60129 1480 539 aa, chain - ## HITS:1 COG:ECs2029 KEGG:ns NR:ns ## COG: ECs2029 COG3131 # Protein_GI_number: 15831283 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Escherichia coli O157:H7 # 1 539 13 551 551 1130 99.0 0 MAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDT LATMTPQAYNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIH FRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTYQY GLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASITGAYKFTIHCEK NQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGE WICRPLNNPQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGK GTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRT GMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIE PIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS >gi|296918718|gb|GG772982.1| GENE 60 60390 - 61733 940 447 aa, chain - ## HITS:1 COG:ydcJ KEGG:ns NR:ns ## COG: ydcJ COG5383 # Protein_GI_number: 16129382 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 447 1 447 447 861 97.0 0 MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADEL ARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLA RNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEF VQEALETFRWHQSATVDEETYRALHNENRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP ECGIEPKVLIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTP KGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLGWFRYRLTPSGEAHR QVIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETRACNHGDASREAFEQ ALGCPVLDEFQLYQEAEERSKRRCGLL >gi|296918718|gb|GG772982.1| GENE 61 61950 - 62873 480 307 aa, chain + ## HITS:1 COG:ydcI KEGG:ns NR:ns ## COG: ydcI COG0583 # Protein_GI_number: 16129381 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 307 48 354 354 596 99.0 1e-170 MEKNSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGARLFER GRQGAQLTLPGEQFLTHAVRVLDAINTAGQSLHRKEGLNNDVVRVGALPTAALGILPSVI GQFHQQQKETTLQVATMSNPMILAGLKTGEIDIGIGRMSDPELMNGLNYELLFLESLKLV VRPNHPLLQENVTLSRVLEWPVVVSPEGTAPRQHSDALVQSQGCKIPSGCIETLSASLSR QLTVEYDYVWFVPSGAVKDDLRHATLVALPVPGHGAGEPIGILTRVDATFSSGCQLMINA IRKSMPF >gi|296918718|gb|GG772982.1| GENE 62 62911 - 63366 283 151 aa, chain - ## HITS:1 COG:trg KEGG:ns NR:ns ## COG: trg COG0840 # Protein_GI_number: 16129380 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 5 151 400 546 546 211 94.0 4e-55 MLLSQGPGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKIMCTIVD AVASVTHIMQEIATASGEQSRGITQVSQAISEMDKVTQQNASLVEEASTAAVSLEEQAAR LTEAVDVFRLNKHSVSAEPRGACEPVSFATV >gi|296918718|gb|GG772982.1| GENE 63 63539 - 63712 99 57 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1514 NR:ns ## KEGG: ECS88_1514 # Name: ydcA # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 57 1 57 57 91 100.0 1e-17 MKKLALILVMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCNDGSISASKKTCTN >gi|296918718|gb|GG772982.1| GENE 64 63957 - 64487 261 176 aa, chain - ## HITS:1 COG:STM1639 KEGG:ns NR:ns ## COG: STM1639 COG3038 # Protein_GI_number: 16764983 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Salmonella typhimurium LT2 # 1 175 1 175 176 283 84.0 1e-76 MGNKYSRLQISIHWLVFLLVIVAYCAMEFRGFFPRSDRPLINMIHVSCGISILVLMVVRL LLRLKCPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGLVMMYNRGNPWFAFGLTMP YASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHYFWKDNTLLRMMPRKRS >gi|296918718|gb|GG772982.1| GENE 65 64676 - 65677 1109 333 aa, chain + ## HITS:1 COG:ECs2022 KEGG:ns NR:ns ## COG: ECs2022 COG0057 # Protein_GI_number: 15831276 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 333 1 333 333 635 98.0 0 MSKVGINGFGRIGRLVLRRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDY TEDSLIVNGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLIS APAGEMKTIVYNVNDDTLDGNDTIVSVASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYT GTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIGLVIPELSGKLKGHAQRVPVKTGSV TELVSILGKKVTAEEVNNALKKATNNNESFGYTDEEIVSSDIIGSHFGSVFDATQTEITA VGDLQLVKTVAWYDNEYGFVTQLIRTLEKFAKL >gi|296918718|gb|GG772982.1| GENE 66 65719 - 67158 1357 479 aa, chain - ## HITS:1 COG:ECs2021 KEGG:ns NR:ns ## COG: ECs2021 COG1012 # Protein_GI_number: 15831275 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 479 1 479 479 941 99.0 0 MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEVVISRIPDGQAEDARKAIDAAERAQPEW EALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWAR RYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF TPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAT AAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKSIYDQ FVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEG KGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNL NVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS >gi|296918718|gb|GG772982.1| GENE 67 67355 - 68155 528 266 aa, chain - ## HITS:1 COG:ydcF KEGG:ns NR:ns ## COG: ydcF COG1434 # Protein_GI_number: 16129375 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 266 1 266 266 541 98.0 1e-154 MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAGNAVMPTIDAACKIARD QQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIE DQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRITGDNPDAPRWLSYP GFVPQLGNNADSVIFVNPLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVDFP AEVIQAWQTLKHDAVLIEAMESRSLR >gi|296918718|gb|GG772982.1| GENE 68 68428 - 72330 4191 1300 aa, chain - ## HITS:1 COG:ECs2015 KEGG:ns NR:ns ## COG: ECs2015 COG1643 # Protein_GI_number: 15831269 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Escherichia coli O157:H7 # 20 1300 1 1281 1281 2534 99.0 0 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDHAAGK VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGE REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ LRQVVKELGIPVNSEPADYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE HKTRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR ELIIALIKSLPKPVRRNFVPAPNFAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDW HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWSGLRRLLLLNIPS PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG NGFKRLGDTLRYLQAIEKRLEKLAIDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED VKEVRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG >gi|296918718|gb|GG772982.1| GENE 69 72531 - 73136 784 201 aa, chain + ## HITS:1 COG:acpD KEGG:ns NR:ns ## COG: acpD COG1182 # Protein_GI_number: 16129373 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Escherichia coli K12 # 1 201 1 201 201 385 99.0 1e-107 MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALR PSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFR YTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYG PEMAAKAQSDAKAAIDSIVAA >gi|296918718|gb|GG772982.1| GENE 70 73190 - 74482 470 430 aa, chain - ## HITS:1 COG:ZynbD_1 KEGG:ns NR:ns ## COG: ZynbD_1 COG0671 # Protein_GI_number: 15801736 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 EDL933 # 1 342 1 342 342 629 95.0 1e-180 MLQGAGWLLLLAPFFFFTYGFLNQFTATQDLNNHDIPSQVFGWETAIPFLPWTIVPYWSL DLLYGFSLFICSSTFEQRRLVHRLILATVMACCGFFLYPLKFSFIRPEVSGVTGWLFSQL ELFDLPYNQSPSLHIILCWLLWRHFRQHLAVRWRKVCGGWFLLIAISTLTTWQHHFIDVI TGLAVGMLIDWMVPVDRRWNYQKPDQRRIKIALPYVAGACSCIVLMELMIMLQLWWSVWL CWPVLSLFIIGRGYGGLGAITTGKDSQGKLPPAVYWLTLPWRIGMWLSMRWFCLRLEPVS KITAGVYLGAFPRHIPAQNAVLDVTFEFPRGRATKDRLYFCVPMLDRVVPEEGELRQAVA MLETLREEQGSVLVHCALGLSRSALVVAAWLLCYGHCKTVDEAISYIRARRSRIVLKEEH KAMLKLWENR >gi|296918718|gb|GG772982.1| GENE 71 74496 - 76253 1187 585 aa, chain - ## HITS:1 COG:ynbC_2 KEGG:ns NR:ns ## COG: ynbC_2 COG0500 # Protein_GI_number: 16129371 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 275 585 1 311 311 619 96.0 1e-177 MENSRIPGEHFFTTSDNTALFYRHWPTLLPGEKKVIVLFHRGHEHSGRLQHIVDELAMPD TAFYAWDARGHGQTSGPRGYSPSLARSVQDVDEFVRFAASDSQVGLEEVVVIAQSVGAVM VATWVHDYAPAIRGLVLASPAFKVKLYVPLARPGLALWHRLRGLFFINSYVKGRYLTHDR QRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID FYQRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGP SADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGAHSAGLHLGMSTGFDSGSSLDYVYQNQ PQGSNAFGRFIDKIYLNSVGWRGIRQRKTHLQMLIKQAVAHLHAKGLAVRVVDIAAGHGR YVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNLEELSALTPR PTLAIVSGLYELFPENEQVKNSLAGLANAIDPGGILIYTGQPWHPQLELIAGVLTSHKDG KPWVMRVRSQGEMDSLVHDAGFDKCTQRIDVWGIFTVSMAVRRDN >gi|296918718|gb|GG772982.1| GENE 72 76269 - 77165 159 298 aa, chain - ## HITS:1 COG:ECs2011 KEGG:ns NR:ns ## COG: ECs2011 COG4589 # Protein_GI_number: 15831265 # Func_class: R General function prediction only # Function: Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase # Organism: Escherichia coli O157:H7 # 1 298 1 298 298 495 95.0 1e-140 MLEKSLAILFALLILATLINRFLVWRLPERKGDEVTLRIRTWWGIVICFSLVISGPRWMT LTFFALISFLALKEYCTLISVHFPRWLYWVIPLNYLLIGFNCFELFLLFIPLAGFLILAT WRVFVGDPSGFLHTVSAIFCGWIMTVFTLSHAAWLLMLPTINIQGGALLVLFLLALTESN DIAQYLWGKFCGRRKVVPKVSPGKTLEGLVGGVITTMIASLIIGPLLTPLNTLQVLLAGL LIGISGFCGDVVMSATKRDVGVKDSGKLLPGHGGLLDRIDSLIFTAPVFFYFIRYCCY >gi|296918718|gb|GG772982.1| GENE 73 77165 - 77770 200 201 aa, chain - ## HITS:1 COG:ECs2010 KEGG:ns NR:ns ## COG: ECs2010 COG0558 # Protein_GI_number: 15831264 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Escherichia coli O157:H7 # 1 201 3 203 203 336 97.0 2e-92 MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLVLVAQPILFLLLPI VLFIRMTLNALDGMLARECNQKTRLGAILNETGDVISDIALYLPFLFLPESNASLVILML FCTILTEFCGLLAQTINGIRSYVGPFGKSDRALIFGLWGLAIAIYPQWMQWNNLLWSIAS ILLLWTAINRCRSVLLMSAER >gi|296918718|gb|GG772982.1| GENE 74 78069 - 78929 779 286 aa, chain - ## HITS:1 COG:ECs2008 KEGG:ns NR:ns ## COG: ECs2008 COG0667 # Protein_GI_number: 15831262 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 558 99.0 1e-159 MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYG PHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVL DVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVC VQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVATSLGATPMQVALA WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEKVLSTLDGISRE >gi|296918718|gb|GG772982.1| GENE 75 79149 - 81140 1575 663 aa, chain - ## HITS:1 COG:no KEGG:APECO1_557 NR:ns ## KEGG: APECO1_557 # Name: entS # Def: EntS/YbdA MFS transporter # Organism: E.coli_APEC # Pathway: not_defined # 1 663 1668 2330 2330 996 100.0 0 MLISGANYSGNAINYWNANNNGRFINSGTVDVTAKALATSGVDASTNHAYFWNQNSGIVN FDKDSGVAVKFTHSNYVAQNDGTMNISGNNAIAMEGNKNAQLINNGTINLGAQGTTDTGM IGMQLDSSATADAVIENNGTINIYANNSFAFSMLGSVGHLVNNGTVTIADGVTGSGLIKQ GNSVNIEGVNGNNGNNSEVHYANYTLPDVPGSSVFVSTDNVSDNGGQNNLNGYVVGTSSD GSAGKLKVSNASLKGVSVNTGFTSGTSATSVTFDNVVQGNNLTDADTITSTSVVWSAQGN TDANGNVDVTMTKNAYTDVVTDSSVNNVAQVLDTGYTNNDLYTSLNVGTTAELNSALKQI SGSQATTVFNEARVLSNRFSMLSDAAPEVANGLAFNVVAKGDPRAELGNDTQYDMMALRK SLTLTEHQNLSLEYGIARLEGNGSDTAGDNGVTGGYSQLFGLKHQMAFDNGMNWNNALRY DVHQLDSSRSIAYGDVNKTADANVKQQYLEFRSEGAKTFELREGLNVTPYAGVKLRHTLE GGYQERNAGDFNLSMNSGSETAVDSIVGLKLDYAGKEGWSANATLEGGPNLSYVKSQRTA SISGAGSQRFNIDDGQSGGGFNSLATMGVKYSSQESALQVDAFHWKEDGISDKGVMLNFK KTF >gi|296918718|gb|GG772982.1| GENE 76 81200 - 83554 1188 784 aa, chain - ## HITS:1 COG:no KEGG:APECO1_557 NR:ns ## KEGG: APECO1_557 # Name: entS # Def: EntS/YbdA MFS transporter # Organism: E.coli_APEC # Pathway: not_defined # 1 784 862 1645 2330 1092 100.0 0 ATANNSGNTTVDGQGSTGTEIAGNNAVVNQDGLLDVSGGGHGIDITGDSATVINKGNITV TDKDSVGVLINGDRATFANTGHIDVNNSATGMSITTSEGAISQAGSMNVGDFSTGMALSG NNNSVTLAAKDLNVIGQKATGVNISGDNNAVDITGNILVDKDQTATNAVDYFYEPSIGVN VSGNSNTVSLDGKLTVVADSELTSRIYADFDGSQENISGLVVSGDDNTVYLNGGIQLVGE ENQLTDGSTVASNRNGYGKTPVITVDGKSSVYLNGDSTINGDLPLAYSGMIRLKNSAMIE IGADATINMQVDIYDHYARSESQMIFVESGAELVNKGDIDTRNIGFAAISGENSTGSNSG NITLSQYNYGLLANAGVGYFTTKGGSAVNNGTITAKVMEQESVINLGASLGLNEANTFYS DANSMMGLDAFDHGYVSNESGGSIEMYGRGNVGMLAIDESTAENAGQITLDALWVDADDT TTLRSNIGNDARSYGVGMAVGTNTYSGPRKNATAVNKQGGVITVYNAGIGMAAYGASNTV INEGIINLEKNANYDSSLGADSLIGMAAYKSGTAINEQSGVININADNGQAFYSDGSGTI LNYGTICVNTNCLTGNDYNETDSYTSLLYTGGDVITAQNETQNLTQKASINDKKEGNVVN SGSLSGADIAISSGELVNTSTGTINNAIIINDGELSNEGSVAKVTLNAGTFGNTGTVNSR MFQTGGTFNNQQGGVVQNGANLSKTAITNNEGTWYLGASSSSDSNNASMMEIYNTAVFNN SGDF Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:36:05 2011 Seq name: gi|296918717|gb|GG772983.1| Escherichia coli MS 110-3 genomic scaffold Scfld15, whole genome shotgun sequence Length of sequence - 633 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 114 - 150 0.6 1 1 Tu 1 . - CDS 376 - 633 141 ## ECS88_4881 hypothetical protein Predicted protein(s) >gi|296918717|gb|GG772983.1| GENE 1 376 - 633 141 85 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4881 NR:ns ## KEGG: ECS88_4881 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 2 85 118 201 201 180 100.0 2e-44 AWCRAGDYRAPESLAGMIKQAWCSALGVDVGCHATLVHFPAWPAVWLARNDDTGFQQVLE RADYLAKEHTKAHCTGERNFGCSRS Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:36:09 2011 Seq name: gi|296918716|gb|GG772984.1| Escherichia coli MS 110-3 genomic scaffold Scfld23, whole genome shotgun sequence Length of sequence - 4434 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 7/0.000 + CDS 2 - 658 456 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 2 1 Op 2 . + CDS 669 - 4434 1790 ## COG3321 Polyketide synthase modules and related proteins Predicted protein(s) >gi|296918716|gb|GG772984.1| GENE 1 2 - 658 456 218 aa, chain + ## HITS:1 COG:AGl2333 KEGG:ns NR:ns ## COG: AGl2333 COG1020 # Protein_GI_number: 15891274 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 216 919 1132 1137 119 31.0 3e-27 KVNGYRIELGEVKSHLEQLDSVGSAAVVCHQGQLYAFITAAENLHPDDTDALLARVRAQL AVQLPYYLLPQHFFLLKVLPMTGNGKIDQAAMVQEVIQRMSQSTSQKSRALAHASPYEQQ VAALWCEVLQREQIGLNDNFFEAGGGSIQIVLLHRRIEEIFKVTVPIAELFRLTTVKRIA GYLQAMQDNARAVNQTQQRDASRSRAQQRLVRRHQRQR >gi|296918716|gb|GG772984.1| GENE 2 669 - 4434 1790 1255 aa, chain + ## HITS:1 COG:all2646 KEGG:ns NR:ns ## COG: all2646 COG3321 # Protein_GI_number: 17230138 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Polyketide synthase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 7 499 8 510 1488 396 42.0 1e-109 MTYSESDIAIVGMNCRYPGVHSVAAFETVLRTGCNILDPKVTPSNGHNHITLNNVYEHMA EFDANFFGYSRAEAEIMDPQQRVFLTCAWEMFEQSGYNPKQHDARVGLYAGVSTSFYLLT HLMNNPDKLAQLGGLQIMVGNDKDHLTSQLAYRLNITGPCVTVQASCATSLVAVHLACEG LLSGQCDMALAGGVTFRMEEQRSYESHGDGLQAEDGLIHTFDAQASGTVYSSGLGMVLLK RATDAQVQGDNILAVIKGSAINNDGGARSGYTVPGVDGQEAVMIEAHSLAEVTPQQIQYL ELHGSGTPLGDAIEFAAIKRVFGTPAPNATPWRLGAVKPNVGHVEMASGITSLIKTVLSL TNRVFYPTLNFQRANPQLGLEDSPFEVVSRLTPWPEGTTPRTAGVSAFGLGGTNAHLVVQ APLSTPQARAQQMGPCVVVLSAKNHNALEQMQNALLAKLAAHPEIRLQDVAYTLRHGRFS APVRKCVIAENCTQLARQLRDAPMVEATTGCTIYWRLGHRFVVALETLSDWLACSEVLSQ AVGQLLEHFPLEPACLQDLSPAQRTFISQYALIALIDERETLNVVLCGDGDGGYAAAVLR GDCTLEQAWHRLNAGQPFDDVPTNPLLQPDVCSLMLDDAASDANRTALEALGQLWLAGVS LDWRWVDAAERMLGSQRIALPGTVFTPQRYWVEAVRPATFSHESSNNLLSRATKSDIIAV VTEIWERTLGVSIDDHHASFFELGGHSLLASTILYDIQQRYGITCTLSAFFADPTIEGLS CYLLEQGGSETAVSALPDTVFAPDQQHLPFPLTDVQQAYWVGRRKSLGLGNISTHIYVEY ELQGLDETAFNRALNAVIARHSMLRAIVNDDGMQQILPNVPEYHVAFYTTQCEDAFQQRC RELRDTLSHQMIDCSRWPLFQMEVVVDPQQKARLHVSIDLLIADAWSLELFIRELAYHYR HPQAALPTLTYSFRDYVLTLKSYEKTPQFERARDYWRARIETLPPGPRLPLRTDPTKLEN PTFVRRSYCLSRAIWQRLKTQAGQMSITPTTLLLTGFAQVLARFSSSPHFSLNLTLFNRL PLHADINHLIGDFTALTLLEIDMSQGETLQARANVIHSQLWRDLDNRLFGGIQVSRLLVQ THRDPAKSVIPIVFTSLLNQYEASWETDDTLFNQPQDDLYSISQTPQVWLDHQVMERNGE LHFNWDVVEQLFEPALMDQMFQCYCQLLHALAQRPQLWHETQDVLALPTVSAPVT Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:36:10 2011 Seq name: gi|296918715|gb|GG772985.1| Escherichia coli MS 110-3 genomic scaffold Scfld24, whole genome shotgun sequence Length of sequence - 1287 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1287 863 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins Predicted protein(s) >gi|296918715|gb|GG772985.1| GENE 1 3 - 1287 863 428 aa, chain - ## HITS:1 COG:all2645_2 KEGG:ns NR:ns ## COG: all2645_2 COG1020 # Protein_GI_number: 17230137 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 24 428 445 883 1356 364 45.0 1e-100 VALPTVSAPVTQAPAPTALLHHGLLRQAALTPQETALISPIRELTYRQLSTAADHVARAL LALGVQHGDRVAVVMEKGWQQIAAVHGILRLGAVYLPVDPVLPPQRRQLLLTVGEVRVQV TQPGLTQLEPSLPVLIIDDGMLDTPAAPLPEVAGDVTDLAYIIFTSGSTGTPKGVMIDHR AAMNTLEDINERFGLNAQDRVFGLSSLSFDLSVYDAFAPFMVGAALVLPEAGREKDPRHW QTVMAHGHVSVWNAVPALMQMLCEYHSGDRMSYPTLRLALLSGDWIPLTLPEQMRERLNE TMDIISLGGATECAIWSVYYPIGEVESTWTSIPYGRGLRNQPVYVLNAQLEECPVGVEGE ICIGGMGLAQGYLNDAEKTAASFVWREASGERIYRTGDRGRYFADGQVAFLGRNDTQVKV NGYRIELG Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:36:10 2011 Seq name: gi|296918714|gb|GG772986.1| Escherichia coli MS 110-3 genomic scaffold Scfld25, whole genome shotgun sequence Length of sequence - 811 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 811 100.0 # AJ278710 [D:1..2900] # 23S ribosomal RNA # Escherichia coli # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:36:20 2011 Seq name: gi|296918713|gb|GG772987.1| Escherichia coli MS 110-3 genomic scaffold Scfld28, whole genome shotgun sequence Length of sequence - 31025 bp Number of predicted genes - 27, with homology - 27 Number of transcription units - 11, operones - 3 average op.length - 6.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 402 - 443 8.0 2 2 Tu 1 . - CDS 455 - 973 585 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 3 3 Op 1 6/0.571 + CDS 1679 - 2182 512 ## COG3516 Uncharacterized protein conserved in bacteria 4 3 Op 2 5/0.571 + CDS 2205 - 3689 1205 ## COG3517 Uncharacterized protein conserved in bacteria 5 3 Op 3 8/0.429 + CDS 3694 - 4119 274 ## COG3518 Uncharacterized protein conserved in bacteria 6 3 Op 4 9/0.143 + CDS 4125 - 5945 1261 ## COG3519 Uncharacterized protein conserved in bacteria 7 3 Op 5 6/0.571 + CDS 6007 - 6966 777 ## COG3520 Uncharacterized protein conserved in bacteria 8 3 Op 6 6/0.571 + CDS 6971 - 8263 1072 ## COG3456 Uncharacterized conserved protein, contains FHA domain 9 3 Op 7 8/0.429 + CDS 8260 - 8784 587 ## COG3521 Uncharacterized protein conserved in bacteria 10 3 Op 8 8/0.429 + CDS 8787 - 10133 928 ## COG3522 Uncharacterized protein conserved in bacteria 11 3 Op 9 4/0.714 + CDS 10138 - 10902 699 ## COG3455 Uncharacterized protein conserved in bacteria 12 3 Op 10 . + CDS 10912 - 13671 542 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 13 3 Op 11 . + CDS 13668 - 14411 562 ## APECO1_1768 hypothetical protein 14 3 Op 12 5/0.571 + CDS 14416 - 15858 986 ## COG3515 Uncharacterized protein conserved in bacteria 15 3 Op 13 5/0.571 + CDS 15938 - 19405 2995 ## COG3523 Uncharacterized protein conserved in bacteria 16 3 Op 14 2/1.000 + CDS 19416 - 20774 973 ## COG3515 Uncharacterized protein conserved in bacteria 17 3 Op 15 . + CDS 20792 - 21271 428 ## COG3157 Hemolysin-coregulated protein (uncharacterized) - Term 21464 - 21506 2.1 18 4 Tu 1 . - CDS 21611 - 22396 313 ## ECS88_0231 aminopeptidase - Prom 22446 - 22505 6.7 - TRNA 22725 - 22801 90.7 # Asp GTC 0 0 - Term 22658 - 22698 6.7 19 5 Tu 1 . - CDS 22935 - 23675 803 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 23711 - 23770 4.3 + Prom 23649 - 23708 2.2 20 6 Tu 1 . + CDS 23731 - 24198 490 ## COG0328 Ribonuclease HI + Term 24209 - 24263 1.3 21 7 Tu 1 . - CDS 24195 - 24917 427 ## COG0500 SAM-dependent methyltransferases - Prom 24948 - 25007 3.8 + Prom 24726 - 24785 2.7 22 8 Op 1 . + CDS 24951 - 25706 290 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Prom 25745 - 25804 1.5 23 8 Op 2 . + CDS 25916 - 27136 675 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 27146 - 27193 7.6 - Term 27142 - 27174 3.0 24 9 Op 1 4/0.714 - CDS 27183 - 27953 550 ## COG0500 SAM-dependent methyltransferases 25 9 Op 2 . - CDS 28031 - 28810 488 ## COG3021 Uncharacterized protein conserved in bacteria - Prom 28890 - 28949 5.7 + Prom 28972 - 29031 3.8 26 10 Tu 1 . + CDS 29072 - 29986 477 ## COG0583 Transcriptional regulator + Term 30022 - 30064 7.1 - Term 29941 - 29974 3.8 27 11 Tu 1 . - CDS 29983 - 30786 1044 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 30884 - 30943 4.4 - TRNA 30949 - 31025 90.7 # Asp GTC 0 0 Predicted protein(s) >gi|296918713|gb|GG772987.1| GENE 1 3 - 234 225 77 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0248 NR:ns ## KEGG: ECS88_0248 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: Bacterial secretion system [PATH:ecz03070] # 1 77 1 77 660 161 100.0 7e-39 MSLKGLRFTLEVDGQEPDTFAVVNFRLIQNQSYPFVMSVDVASDSFMQTAEMLLEKNATL TIWQGVIPLRYVTGVVA >gi|296918713|gb|GG772987.1| GENE 2 455 - 973 585 172 aa, chain - ## HITS:1 COG:ECs0234 KEGG:ns NR:ns ## COG: ECs0234 COG3157 # Protein_GI_number: 15829488 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 337 94.0 5e-93 MPTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEFLHNVTVPTDPQSGQPS GQRAHKPFIFTVALNKAVPLLYNALASGEMLPKVELHWWRTSVEGKQEHYFTTRLTDATI VDMNLHMPHCQDPAQREFTQLLAVSLAYRKVEWEHIKSGTSGADDWRAPLEA >gi|296918713|gb|GG772987.1| GENE 3 1679 - 2182 512 167 aa, chain + ## HITS:1 COG:ECs0233 KEGG:ns NR:ns ## COG: ECs0233 COG3516 # Protein_GI_number: 15829487 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 9 162 7 161 166 166 55.0 1e-41 MSKMNNNGGSVAPKERISVRYTPKVDGVAADIELPLNLLITGNLKGKPDNTPLDERTAIA INRYNLNAVISEADIEREFVVPAELSDAPNEQMYVNLKVKSMDDLSPDHIASQVPEIKRL LELREALVALKSPLGNIPAFRAQLQALLENEDTREQLIQELGIAVQK >gi|296918713|gb|GG772987.1| GENE 4 2205 - 3689 1205 494 aa, chain + ## HITS:1 COG:YPO3706 KEGG:ns NR:ns ## COG: YPO3706 COG3517 # Protein_GI_number: 16123844 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 494 1 493 493 748 71.0 0 MSVKEEIAPVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAE PINILAVDAMIADIDARTSRQMDAIIHAPEFQELESLLRSLKLLVERADTRENIKVHFLN VTQEELLDDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYI SQVSAMAHSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYLGL TAPRFLLRHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNI IGPSSGGAVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACF FSANSVQKPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSD LERELNTWIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMG ASFDLSLVGRLDKE >gi|296918713|gb|GG772987.1| GENE 5 3694 - 4119 274 141 aa, chain + ## HITS:1 COG:YPO3705 KEGG:ns NR:ns ## COG: YPO3705 COG3518 # Protein_GI_number: 16123843 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 139 4 141 146 113 42.0 1e-25 MLRRDSGPTGSLFERIREAANPPSYQNPKEALIRSIRRNLRQVLNTRSGSCYGSPELGIT DLNDESLASSDFRREIRKSISQCILHYEPRITDVVVTAAAPDEYAPVELCFHIVATVDVS ETRGVFEFDILLDNHQRYCVE >gi|296918713|gb|GG772987.1| GENE 6 4125 - 5945 1261 606 aa, chain + ## HITS:1 COG:ECs0229 KEGG:ns NR:ns ## COG: ECs0229 COG3519 # Protein_GI_number: 15829483 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 12 605 12 608 616 747 59.0 0 MAFEERYYREELDYLRQLGKLLAQEKPHLAHFLAEKEGDPDVERLMEAFAFMSGSLRQKL EDEFPEFTHGLIRMLWANYLRPVPAMTVIAYEPKTDQLKVPVQVCRNELIRSRSEKSSLT AQKVLPDNHDKIVSSVACHFTLARDIWLQPLRILDTRNASSLKEGIIDISFTADNNVSPA MLDLNKITFWLGNEDDYTRHQLYLWFCECLMDAELIAGEYRLPLPDLWLEAAGFDNRDAL LPWPKNVHSGYRVLQEYFCYPEAFFFFHLRDVAPLPDDFPINAFTLRLHFNRPLPADIKL RQDSLRLHCTPAINLFTHYAEPVRPDGRMAEYPLRASHKHPDAYDIFQVSTVTSKVKVSG TEISPGSQARVWPEFESFQHQMEYSRQREVVYWHHRTKTSLLHHGLEHSIAFVHADGSIP GSSRFNDDVITTSLICTNRMIPARLHTGDICVAVNKNPAVASFRNVTRPTLPLWPVTDGD MHWSLISAMNLNYLSLLDRETLIQILRTFDLPGAHHPQRARLSRQKLDAIEKLETKPVDR LFKGVPVRGLATTLWIRPDPFICEGEIYLLGTVLSHFFALYASINSYHCLKIINTESQES WEWQEN >gi|296918713|gb|GG772987.1| GENE 7 6007 - 6966 777 319 aa, chain + ## HITS:1 COG:ECs0228 KEGG:ns NR:ns ## COG: ECs0228 COG3520 # Protein_GI_number: 15829482 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 9 318 55 359 360 382 59.0 1e-106 MEALYRRHGAPGQDISLRTEPAREIVRFSSDASISFPGTDLSALSRSQNGQYVLQTRFLG FSGSQSPLPGYYLDQMAQESAQNEDGLKEFLDLFSHRWTQFAYHAWRKYRYYICFRSGGT DTFSQRMYALVGLGNQSVRDRLAINHSKMLAYAGILATPGRAPEVICNLVSHCFDLPDVT IERWQLRKVAIDPAHQNRLGVRNPKGKTAGHIPGRSILGVNFTLGARVPDRSGKFLLQIG GLSRERYLSFLPDGENHLPLTMFLSFILRDQFAWDLRLCLAPQQAKGMRLSDPASSRLGR TSFIGQPKVPPAITIRIRE >gi|296918713|gb|GG772987.1| GENE 8 6971 - 8263 1072 430 aa, chain + ## HITS:1 COG:Z0258 KEGG:ns NR:ns ## COG: Z0258 COG3456 # Protein_GI_number: 15799907 # Func_class: T Signal transduction mechanisms # Function: Uncharacterized conserved protein, contains FHA domain # Organism: Escherichia coli O157:H7 EDL933 # 2 430 5 433 433 560 70.0 1e-159 MEPLMAEEKQQSRQASLTLQVMNGNELESGRAAKCLFSENGGDIGHTPECHWQVQDRAGS IAARACTVIRHDGAYCLRCLTPGLMINLAPASSDALIRLRQGDEIQLGALALKVFLHDGA AVTYDERMATPETIVMNRDSLADTLLTTEGQPAYPGMPFQHQLAPTVAHGFSSDPLQALQ TESLMVADDPIAPRVSRPVAPASDLTGANGINTPFMDLPPGNARHEDGDEFSAMAQYHLA VTPLLRGMECPLTLHNSQDADEFLEEAGRALQAAIKGLLSLQQQQNSLSDKHLRPLEDNP LRLDMDYATALNVMFAEGKSPVHLAAPAAIAESLRNIRHHEEANRAAIVEALRVMLDAFS PGNLMRRFAQYRRSHELRQKMDDAWAWQMYSNYYDELASSRQQGFEMLFNEVYAQVYDRV LREKQREPEA >gi|296918713|gb|GG772987.1| GENE 9 8260 - 8784 587 174 aa, chain + ## HITS:1 COG:ECs0226 KEGG:ns NR:ns ## COG: ECs0226 COG3521 # Protein_GI_number: 15829480 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 173 1 173 174 281 80.0 6e-76 MNGKAFLACVLMSVVLTGCETAKKISQVIRNPDIQVGKLMDQSTELTVTLLTEPDSNLTA DGEAAPVDVQLVYLSDDSKFHAADYDQVATTALPDVLGKNYIDHQDFNLLPDTVKTLPPI KLDEKTGYIGVIAYFSDDQATEWKQIESVESIGHHYRLLVHIRASAIEMKKEEN >gi|296918713|gb|GG772987.1| GENE 10 8787 - 10133 928 448 aa, chain + ## HITS:1 COG:ECs0225 KEGG:ns NR:ns ## COG: ECs0225 COG3522 # Protein_GI_number: 15829479 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 448 1 443 443 565 61.0 1e-161 MATMKNKVIWQEGLFALPQHFQQQQRHCEYLLTRRLDALGDFFWGFTELSINTELLAQGK IMIDRAAGCMPDGTVFSIPDQDLLPEPFQPGTLSSKESHNIYLALPVISDVINEIQGLHS AGQGMERYRLTHTRVRDFHTDEGDEQPVGLGQLIPRIVSGADDLSAMVTLPLCRILNKNA TGALVLDNTFIPTIQAVRVSGLLGAFSGEVQGLLATRAADLAGRIGSPEQSGIADVAEFM MLQMLNRYQMQFTHRSQLHTLHPEAFYRDLVGLLGELMTFTEGNRLPCTVEPYNHRDLTA TFTRTVIPELRRALNTVLVPRAQNLPLFFSEGTWIATINDPTLLQSCKLVLAVRARMPYD QVQRQFIQQSKVAATDKIRSVVSVQVPGIPLHTLTAAPRQLPYHEGYVYFELEKGTPAWQ DVIKAGALALHISGSFPDLNLQLWAIRG >gi|296918713|gb|GG772987.1| GENE 11 10138 - 10902 699 254 aa, chain + ## HITS:1 COG:ECs0224 KEGG:ns NR:ns ## COG: ECs0224 COG3455 # Protein_GI_number: 15829478 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 21 254 20 253 253 407 88.0 1e-113 MSDMSEASVFPVEPESGTPGRQYRLALRGNSLNPMIDAATPLLGMVMRLSTMNSQAMPEH LFTQVVTDVQAVEQLLQEQGYEPGVIVSFRYILCTFIDEAALGNGWSNKNEWIKQSLLVH FHNEAWGGEKVFILLERLIREPVRYQDLLEFLYLCFSLGFRGRYKVAIQQQDEFERIYQR LHHALHKLRGDAPFPLLHQKNNIQGGRYQLIRRLTIKHVLCGGLVVLTVFYLFYLLRLDS QTQDILHQLNKLLR >gi|296918713|gb|GG772987.1| GENE 12 10912 - 13671 542 919 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 521 876 421 789 815 213 35 1e-54 MIQIDLATLVKRLNPFAKQALEMAASECMSQQASEITVAHVLLQMLAIPRNDVRVIAERT GISAEDLRQALTVESYPGGRSAEGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLT LLHSPLRYIPPAAARLLTAINRDQLQQDFAAWTKESAESVDLAGGQTPRATETGDTLLAR YAKNMTADARNGRLDPVLCRNYEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRI VAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIFSPVPVILFIDEAHTL IGAGNQQGGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNA AEATIILRGLSAVYEQSHGVLIDDDALQAAATLSERYLSGRQLPDKAIDVLDTACARVAI NLSSPPKQISALTTLSHQQEAEIRQLERELRIGLRTDTSRMTEVLEQYDETLSALDELEV AWQQQTLVQEIIALRQQLLGVAEDDVASLPDADAVEDTPPEAEQDSTDAESADDAGSVQP EETAETVSPVQRLAQLTAELDALHNDQLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMS VITDLPVWLGGTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQ LAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLD EVEKAHPDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHADDPETMQE ALYPVLADFFKPALLARMEVVPYLPLSKETLATIIAGKLARLDNVLRSRFGADVIIGPEV TDEIMSRVTRAENGARMLESVIDGDMLPPLSLLLLQKMAANTAIARIRLSAADGAFTADV EDALPDDAVTPQTEDETVL >gi|296918713|gb|GG772987.1| GENE 13 13668 - 14411 562 247 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1768 NR:ns ## KEGG: APECO1_1768 # Name: aec28 # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 247 1 247 247 457 100.0 1e-127 MSRLCVFRQTGWFIAGLMAGLPASAAPTETSSVAGVAVAVATATPPDATATLQAMQSCRQ ETAALERLDCYDRILAPEQAGFGGAALVKARYQGEAWARATEQEKRRQGNTTELLVTQVP GERPTVVITTPAIGHVPPRPVLMFSCVDNITRMQVALMHPLDVHDIAVTLNADSRALRSH WFVRENGTLLESSRGLSGIDEIKQLFGAKTLTVDTGTDNAAGKLTFNIDGLARVIAPLRD ACHWAGE >gi|296918713|gb|GG772987.1| GENE 14 14416 - 15858 986 480 aa, chain + ## HITS:1 COG:ECs0220 KEGG:ns NR:ns ## COG: ECs0220 COG3515 # Protein_GI_number: 15829474 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 220 480 5 264 264 372 75.0 1e-102 MAMDLRNPDVWLAHLLENLPEDKLSAALDDGNADWEFVDSEIVKLGSLAHSQLDIPELQR RGLMLLASETKDFRLLAHLLRTLQHAGDILLASRMLAQYTEHYWTCAAPQNMAHKKRFAA QVIKRFESAVQDFAGNAATIQRDALLGELAKLAQCWQAHNASELAKATDDLFSLFQRAFR DVAPEMTSSARSAAIAPQATTGYVPDMSPHTVAAQPPVAATPIPQVTVENHDDKAWRDTL LKVAAILCERQPESPQGYRLRRHALWQTITSTPQAESDGRTPLAAFPVDMMDDYLARLNN ADMALWQQVEKSLLLAPYWLDGHYLSAQTALRLGYKQVADAIRDEVTDFLARLPALINLL FNDRTPFVSEQTKQWLASSGSVNQTVPVVQTDEELQAAKACFDENGLEAALRYLENLPEG DPRHQFHRQFFGAQLLEEAGMVQLAQQQYRMLFRTGLHMMLSEWEPSLLKALEQKLTAEQ >gi|296918713|gb|GG772987.1| GENE 15 15938 - 19405 2995 1155 aa, chain + ## HITS:1 COG:Z0250 KEGG:ns NR:ns ## COG: Z0250 COG3523 # Protein_GI_number: 15799899 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 11 1155 1 1144 1144 1766 77.0 0 MPRFKVSATWLLTLAWIFLLVWIWWQGPKWTLYEQHWLAPLANRWLATAVWGLIALVWLT WRVMKRLQKLEKQQKQQREEEKDPLTVELHRQQQYLDHWLLRLRRHLDNRRYLWQLPWYM VIGPAGSGKSTLLREGFPSDIVYTPESIRGVEYHPLITPRVGNQAVIFDVDGVLTTPGGD DLLRRRLREHWLGWLMQTRARQPLNGLILTLDLPDLLTADKSRRETLVQNLRQQLQEIRQ SLHCRLPVYVVLTRLDLLNGFAALFHSLDKKDRDAILGVTFTRRAHESDGWRSELGAFWQ TWVQQVNLALSDLVLAQTGAAPRSAVFSFSRQMQGTGEIVTALLAALLDGENMDVMLRGV WLTSSLQRGQVDDIFTQSAARQYGLGNSSLATWPLVETTPYFTRRLFPEVLLAEPNLAGE NSVWLNSSRRRLTAFSTCGAALAALMVGSWHHYYNQNWQSGVNVLAQAKAFMDVPPPQGT DEFGNLQLPLLNPVRDATLAYGDYRDHGFLADMGLYQGARVGPYVEQTYIQLLEQRYLPS LMNGLIRDLNIAPPESEEKLAVLRVVRMMEDKSGRNNEAVKQYMARRWSNEFHGQRDIQA QLMVHLDYALEHTDWHAQRQSSDSDAVSRWTPYDKPIINAQQELSKLPIYQRVYQTLRTK ALSVLPADLNLRDQVGPTFDNVFVAGNDEKLVIPQFLTRYGLQSYFVKQREGLVELTALD SWVLNLTQSVAYSEADREEIQRHITEQYISDYTATWRAGMDNLNVRDYEAMSALTDALEQ IISGDQPFQRALTALRDNTHALTLSGKLDDKAREAAINEMDYRLLSRLGHEFAPENSALE EQKDKASTLQAVYQQLTELHRYLLAIQNSPVPGKSALKAVQLRLDQNSSDPIFATRQMAK TLPAPLNRWVGKLADQAWHVVMVEAVRYMEVDWRDNVVKPFNEQLADNYPFNPRATQDAS LDSFERFFKPDGILDNFYKNNLRLFLENDLTFGDDGRVLIREDIRQQLDTAQKIRDIFFS QQNGLGAQFAVETVSLSGNKRRSVLNLDGQLVDYSQGRNYTAHLVWPNNMREGNESKLTL IGTSGRAPRSIAFSGPWAQFRLFGAGQLTNVTSDTFNVRFNVDGGAMVYQVHVDTEDNPF TGGLFSLFRLPDTLY >gi|296918713|gb|GG772987.1| GENE 16 19416 - 20774 973 452 aa, chain + ## HITS:1 COG:Z0249 KEGG:ns NR:ns ## COG: Z0249 COG3515 # Protein_GI_number: 15799898 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 434 31 466 499 618 74.0 1e-177 MSNYALTQTIVTGSDPRALPEFSAIREEINKANHPSQPELNWKLVESLALSIFKANGVDL HTATYYTLARTRNQGLAGFCEGAELLAAMIIHEWDKFWPQSGPARTEMLDWFNTRTGNIL RQQVSFSENDLSLLYRTERALQLICDKLQQVELKRQPRVENLLYFVQNTRKRFEPQPRNR TDTAAQTMVRTLVYAPEGTASATAETMPPLPDLPEMRVGVRGVADNADKAKQGDTVKGFV AGAACTAVIASALWWWQAYPMQQQLTQVRDTTQGAATVWLASPVLKEYEQYLQQLLNAPP LQPLETGMQMMRTADTLWPESLQQQEASRMWSNTLRNRAQASPQMKGWQQARQNLRDFAD LMMKKETEKQGFTLSYIKTVTWQAERLLNQETPLEYLLTQYQETRTQKQDTQALEKESNE RLDGLLSRWLLLKNTGQDMATDNRTEPVHPTH >gi|296918713|gb|GG772987.1| GENE 17 20792 - 21271 428 159 aa, chain + ## HITS:1 COG:ECs0216 KEGG:ns NR:ns ## COG: ECs0216 COG3157 # Protein_GI_number: 15829470 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 225 67.0 2e-59 MANPVYLTLNGELQGLISSGCSSMPSIGNKAQIAHQDQIMVTSLSHGLSRAQNVNHQELT ITKPVDKSSPLLGKAISENECLTCDFVFYRTNRFGINEPYYKLKLANARLSNIGLTVPHT INDSPGQAEESVSFTYESINWEHSVAGTSAYSLWSERIF >gi|296918713|gb|GG772987.1| GENE 18 21611 - 22396 313 261 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0231 NR:ns ## KEGG: ECS88_0231 # Name: yafT # Def: aminopeptidase # Organism: E.coli_S88 # Pathway: not_defined # 1 261 1 261 261 497 100.0 1e-139 MNLKKVCCICVLFSLLAGCASESPIDEKKKKTQTTQISINKNVPQQLTDKDLYGNETTLA VSEEDIQAALEGDEFRVPLNSPVILVQSGSRAPETIMQEEMRKYYTVATFSGIPDRKKTV TCNKDKNKDESLDIVDAENMNWMQALRFVAAKGHQKAIIVFQDTLQTGKYDSGLKSIVWT DYKNQKLTDTMSLRYLVRFTLVDVATGEWATWSPVNYESKVIFPQIGNKNSDSLDVAEQQ ISQLKQKTYAAVVKDLVNRYQ >gi|296918713|gb|GG772987.1| GENE 19 22935 - 23675 803 246 aa, chain - ## HITS:1 COG:dnaQ KEGG:ns NR:ns ## COG: dnaQ COG0847 # Protein_GI_number: 16128202 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli K12 # 4 246 1 243 243 484 99.0 1e-137 MTAMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRL VDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRD IPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLA MTGGQTSMAFAMEGETQQQQGETTIQRIVRQASKLRVVFATDEELAAHEARLDLVQKKGG SCLWRA >gi|296918713|gb|GG772987.1| GENE 20 23731 - 24198 490 155 aa, chain + ## HITS:1 COG:ECs0210 KEGG:ns NR:ns ## COG: ECs0210 COG0328 # Protein_GI_number: 15829464 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 314 100.0 5e-86 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALK EHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEW VKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV >gi|296918713|gb|GG772987.1| GENE 21 24195 - 24917 427 240 aa, chain - ## HITS:1 COG:yafS KEGG:ns NR:ns ## COG: yafS COG0500 # Protein_GI_number: 16128200 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 240 7 246 246 484 99.0 1e-137 MKPARVPQTVVAPDCWGDLPWGELYRKALERQLNPWFTKMYGFHLLKIGNLSAEINCEAC AVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADRVLIDD GWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQLDWLSLLNFEVLHASRFHVLP WNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQSKNKPRIRQAVGATRQCRKPQA >gi|296918713|gb|GG772987.1| GENE 22 24951 - 25706 290 251 aa, chain + ## HITS:1 COG:ECs0208 KEGG:ns NR:ns ## COG: ECs0208 COG0491 # Protein_GI_number: 15829462 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 515 98.0 1e-146 MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAISANNWQPEAIFLTHHHHDHVG GVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSK PYLFCGDTLFSGGCGRLFEGTPSQMYQSIKKLSALPDDTLVCCAHEYTLSNMKFALSILP HDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEER FAWLRSKKDRF >gi|296918713|gb|GG772987.1| GENE 23 25916 - 27136 675 406 aa, chain + ## HITS:1 COG:dniR KEGG:ns NR:ns ## COG: dniR COG0741 # Protein_GI_number: 16128198 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli K12 # 1 406 47 452 452 775 100.0 0 MDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIA GQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDV VASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQE TKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLK TFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVR SGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRK GDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS >gi|296918713|gb|GG772987.1| GENE 24 27183 - 27953 550 256 aa, chain - ## HITS:1 COG:ECs0206 KEGG:ns NR:ns ## COG: ECs0206 COG0500 # Protein_GI_number: 15829460 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 476 97.0 1e-134 MTTQSHHDHVEKQFSSQASEYLTSTVHASGRDLQRLAVRLADYPDASVLDMGCGAGHASF VAAQNVSAVVAYDLSAQMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSA HHWHDVGAALREVNRILKPGGRLIVMDVMSPGHPVRDIWLQTVEALRDTSHVRNYASGEW LRLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVDAIRIYQQSASTEVKTYFALQND GSFTSDIIMVEAHKAA >gi|296918713|gb|GG772987.1| GENE 25 28031 - 28810 488 259 aa, chain - ## HITS:1 COG:ECs0205 KEGG:ns NR:ns ## COG: ECs0205 COG3021 # Protein_GI_number: 15829459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 259 8 266 266 512 100.0 1e-145 MRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERIRILVWNIYKQQRAEWLSVLKNYG KDAHLVLLQEAQTTPELVQFATANYLAADQVPAFVLPQHPSGVMTLSAAHPVYCCPLRER EPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYSKQLLPIGDQIAHHSGPVIM AGDFNAWSRRRMNALYRFAREMSLRQVRFTDDQRRRAFGRPLDFVFYRGLNVSEASVLVT RASDHNPLLVEFSPGKPDK >gi|296918713|gb|GG772987.1| GENE 26 29072 - 29986 477 304 aa, chain + ## HITS:1 COG:ECs0204 KEGG:ns NR:ns ## COG: ECs0204 COG0583 # Protein_GI_number: 15829458 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 304 1 304 304 570 97.0 1e-163 MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLT EEGERYFHRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERYP EVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLFNSYRKIIASPDYISCYGKPE TIDDLKQHICLRFTEPASLNTWPIACSDGQLHEVKYGLSSNSGETLKQLCLSGNGIACLS DYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSGHVKTAPGGA VREA >gi|296918713|gb|GG772987.1| GENE 27 29983 - 30786 1044 267 aa, chain - ## HITS:1 COG:ECs0203 KEGG:ns NR:ns ## COG: ECs0203 COG0656 # Protein_GI_number: 15829457 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli O157:H7 # 1 267 1 267 267 496 97.0 1e-140 MAIPAFGLGTFRLKDDVVISSVKTALELDYRAIDTAQIYDNEAAVGQAIAESGVPRHELY ITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPSDEVSAEEFMQALLEAKKQ GLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMT LAYGNALKDKVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRENLESNLKAQNLQLD AEDKKAIAALDCNDRLVSPEGLAPEWD Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:36:32 2011 Seq name: gi|296918712|gb|GG772988.1| Escherichia coli MS 110-3 genomic scaffold Scfld37, whole genome shotgun sequence Length of sequence - 1067 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1067 1463 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|296918712|gb|GG772988.1| GENE 1 3 - 1067 1463 355 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 2 355 35 401 407 568 76 1e-163 TVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMI TGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEME VRELLSQYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLL PIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGE NVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYF RTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGV Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:36:33 2011 Seq name: gi|296918711|gb|GG772989.1| Escherichia coli MS 110-3 genomic scaffold Scfld39, whole genome shotgun sequence Length of sequence - 543 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 543 100.0 # ECOUW87 [D:1..2063] # 23S ribosomal RNA # Escherichia coli str. K-12 substr. MG1655 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:37:15 2011 Seq name: gi|296918710|gb|GG772990.1| Escherichia coli MS 110-3 genomic scaffold Scfld44, whole genome shotgun sequence Length of sequence - 129432 bp Number of predicted genes - 118, with homology - 117 Number of transcription units - 68, operones - 30 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . - CDS 857 - 2701 1604 ## COG4206 Outer membrane cobalamin receptor protein - Prom 2937 - 2996 3.3 + Prom 2986 - 3045 6.0 3 2 Tu 1 . + CDS 3070 - 4170 1135 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Term 4160 - 4203 6.1 4 3 Op 1 . - CDS 4210 - 4569 319 ## APECO1_2499 hypothetical protein 5 3 Op 2 11/0.000 - CDS 4569 - 5273 659 ## COG1309 Transcriptional regulator 6 3 Op 3 5/0.276 - CDS 5323 - 6639 1266 ## COG0477 Permeases of the major facilitator superfamily 7 3 Op 4 . - CDS 6682 - 7848 1044 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 7917 - 7976 8.8 + Prom 7904 - 7963 5.7 8 4 Tu 1 . + CDS 8178 - 9578 431 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Term 9288 - 9313 -0.8 9 5 Op 1 9/0.000 - CDS 9561 - 10478 993 ## COG0583 Transcriptional regulator - Prom 10512 - 10571 4.4 10 5 Op 2 7/0.138 - CDS 10730 - 12013 1101 ## COG0477 Permeases of the major facilitator superfamily 11 5 Op 3 . - CDS 12080 - 13294 1163 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 12 6 Op 1 2/0.690 - CDS 13792 - 15165 1793 ## COG0165 Argininosuccinate lyase 13 6 Op 2 8/0.000 - CDS 15226 - 15999 1055 ## COG0548 Acetylglutamate kinase 14 6 Op 3 . - CDS 16010 - 17014 946 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Prom 17126 - 17185 6.1 + Prom 17060 - 17119 3.3 15 7 Tu 1 . + CDS 17168 - 18319 993 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 18417 - 18466 -0.1 + Prom 18354 - 18413 5.8 16 8 Tu 1 . + CDS 18660 - 21272 3071 ## COG2352 Phosphoenolpyruvate carboxylase + Term 21290 - 21323 5.2 + Prom 21370 - 21429 4.8 17 9 Tu 1 . + CDS 21455 - 23188 2008 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase + Term 23340 - 23372 1.3 + Prom 23296 - 23355 4.7 18 10 Tu 1 . + CDS 23414 - 24265 727 ## COG2207 AraC-type DNA-binding domain-containing proteins 19 11 Op 1 2/0.690 - CDS 24252 - 24593 289 ## COG1445 Phosphotransferase system fructose-specific component IIB 20 11 Op 2 11/0.000 - CDS 24595 - 25473 593 ## COG1180 Pyruvate-formate lyase-activating enzyme 21 11 Op 3 4/0.345 - CDS 25439 - 27736 2267 ## COG1882 Pyruvate-formate lyase 22 11 Op 4 7/0.138 - CDS 27787 - 28107 499 ## COG1445 Phosphotransferase system fructose-specific component IIB 23 11 Op 5 . - CDS 28122 - 29201 1329 ## COG1299 Phosphotransferase system, fructose-specific IIC component - Prom 29405 - 29464 3.1 + Prom 29266 - 29325 4.2 24 12 Op 1 2/0.690 + CDS 29510 - 32011 2612 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 25 12 Op 2 3/0.517 + CDS 32023 - 32685 729 ## COG0176 Transaldolase 26 12 Op 3 1/0.793 + CDS 32696 - 33799 1230 ## COG0371 Glycerol dehydrogenase and related enzymes + Prom 33840 - 33899 3.9 27 13 Tu 1 . + CDS 34075 - 34692 499 ## COG3738 Uncharacterized protein conserved in bacteria 28 14 Tu 1 . - CDS 34719 - 35624 928 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 35649 - 35708 4.8 29 15 Tu 1 . - CDS 35746 - 37926 2726 ## COG0376 Catalase (peroxidase I) - Prom 38069 - 38128 4.7 - Term 38129 - 38183 10.1 30 16 Tu 1 . - CDS 38255 - 39145 878 ## COG0685 5,10-methylenetetrahydrofolate reductase - Prom 39175 - 39234 4.1 31 17 Tu 1 . - CDS 39527 - 41080 1473 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 41294 - 41353 2.8 + Prom 41066 - 41125 4.7 32 18 Tu 1 . + CDS 41213 - 42337 198 ## ECS88_4395 hypothetical protein + Term 42410 - 42446 2.5 33 19 Op 1 1/0.793 + CDS 42729 - 44120 831 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 34 19 Op 2 . + CDS 44161 - 45780 1093 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 35 19 Op 3 . + CDS 45857 - 46717 419 ## COG3248 Nucleoside-binding outer membrane protein + Term 46903 - 46931 1.0 - Term 46890 - 46918 1.0 36 20 Op 1 5/0.276 - CDS 46935 - 49367 2683 ## COG0527 Aspartokinases 37 20 Op 2 . - CDS 49370 - 50530 1190 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 50567 - 50626 4.8 + Prom 50613 - 50672 6.7 38 21 Op 1 . + CDS 50807 - 51124 470 ## COG3060 Transcriptional regulator of met regulon + Term 51134 - 51172 -0.8 39 21 Op 2 . + CDS 51184 - 51792 621 ## ECS88_4387 peptidoglycan peptidase - Term 51804 - 51844 7.0 40 22 Tu 1 . - CDS 51857 - 52069 384 ## PROTEIN SUPPORTED gi|15804527|ref|NP_290567.1| 50S ribosomal protein L31 - Prom 52130 - 52189 5.2 + Prom 52188 - 52247 2.8 41 23 Tu 1 . + CDS 52272 - 54470 2216 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase + Prom 54478 - 54537 5.1 42 24 Op 1 . + CDS 54626 - 55651 868 ## COG1609 Transcriptional regulators + Prom 55654 - 55713 2.3 43 24 Op 2 7/0.138 + CDS 55848 - 56702 668 ## COG3087 Cell division protein + Term 56740 - 56771 4.1 + Prom 56716 - 56775 1.7 44 25 Op 1 24/0.000 + CDS 56795 - 57325 647 ## COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit 45 25 Op 2 6/0.207 + CDS 57335 - 58666 1205 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 58695 - 58728 2.9 46 26 Op 1 7/0.138 + CDS 58733 - 59659 1040 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase + Prom 59667 - 59726 5.3 47 26 Op 2 . + CDS 59752 - 60237 521 ## COG0684 Demethylmenaquinone methyltransferase + Term 60245 - 60273 1.0 - Term 60232 - 60260 1.0 48 27 Tu 1 . - CDS 60322 - 60561 506 ## COG3074 Uncharacterized protein conserved in bacteria + Prom 60827 - 60886 5.3 49 28 Op 1 18/0.000 + CDS 60992 - 61837 769 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 50 28 Op 2 4/0.345 + CDS 61860 - 63368 1969 ## COG0554 Glycerol kinase + Prom 63392 - 63451 58.6 51 29 Op 1 4/0.345 + CDS 63550 - 64560 1241 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins + Term 64581 - 64616 5.1 52 29 Op 2 . + CDS 64657 - 65403 776 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 53 30 Op 1 3/0.517 - CDS 65408 - 65836 394 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins 54 30 Op 2 3/0.517 - CDS 65863 - 66162 372 ## COG3691 Uncharacterized protein conserved in bacteria - Prom 66302 - 66361 3.2 55 31 Tu 1 . - CDS 66374 - 66814 431 ## COG3152 Predicted membrane protein - Prom 66838 - 66897 2.5 + Prom 66832 - 66891 5.8 56 32 Tu 1 . + CDS 66915 - 67514 528 ## E2348C_4224 hypothetical protein + Term 67566 - 67596 2.1 57 33 Tu 1 . + CDS 67622 - 68389 893 ## COG0149 Triosephosphate isomerase + Term 68399 - 68433 5.2 58 34 Tu 1 . - CDS 68444 - 69199 573 ## COG2134 CDP-diacylglycerol pyrophosphatase - Prom 69223 - 69282 4.8 - Term 69234 - 69296 4.7 59 35 Tu 1 . - CDS 69306 - 70295 1147 ## COG1613 ABC-type sulfate transport system, periplasmic component - Prom 70506 - 70565 7.0 - Term 70436 - 70480 -0.7 60 36 Op 1 . - CDS 70615 - 71577 1260 ## COG0205 6-phosphofructokinase - Prom 71657 - 71716 4.2 - Term 71663 - 71710 1.3 61 36 Op 2 . - CDS 71758 - 72660 546 ## COG0053 Predicted Co/Zn/Cd cation transporters - Prom 72737 - 72796 32.6 - Term 72785 - 72815 4.1 62 37 Tu 1 . - CDS 72861 - 73361 257 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 73388 - 73447 2.0 + Prom 73395 - 73454 2.1 63 38 Op 1 40/0.000 + CDS 73511 - 74209 938 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 64 38 Op 2 . + CDS 74206 - 75579 1357 ## COG0642 Signal transduction histidine kinase + Term 75688 - 75723 -0.7 - Term 75593 - 75656 0.8 65 39 Tu 1 . - CDS 75685 - 76359 529 ## COG2258 Uncharacterized protein conserved in bacteria - Prom 76381 - 76440 3.5 - Term 76448 - 76485 6.2 66 40 Tu 1 . - CDS 76508 - 77497 959 ## ECSE_4198 2-keto-3-deoxygluconate permease - Prom 77622 - 77681 7.3 - Term 77660 - 77696 6.4 67 41 Tu 1 . - CDS 77751 - 78371 567 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent - Prom 78422 - 78481 7.2 + Prom 78405 - 78464 6.0 68 42 Tu 1 . + CDS 78656 - 79690 1270 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 69 43 Op 1 8/0.000 - CDS 79687 - 80625 629 ## COG2207 AraC-type DNA-binding domain-containing proteins 70 43 Op 2 . - CDS 80609 - 81445 401 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 81502 - 81561 2.6 + Prom 81650 - 81709 2.8 71 44 Op 1 6/0.207 + CDS 81733 - 83202 1265 ## COG1070 Sugar (pentulose and hexulose) kinases 72 44 Op 2 5/0.276 + CDS 83199 - 84458 1285 ## COG4806 L-rhamnose isomerase + Term 84517 - 84561 4.1 + Prom 84578 - 84637 5.4 73 45 Op 1 4/0.345 + CDS 84735 - 85559 832 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 74 45 Op 2 . + CDS 85569 - 85883 289 ## COG3254 Uncharacterized conserved protein + Term 85890 - 85928 -0.2 - Term 85795 - 85847 -1.0 75 46 Tu 1 . - CDS 85924 - 87318 1528 ## ECS88_4347 glycoporin 76 47 Tu 1 . - CDS 87672 - 88052 257 ## ECED1_4600 hypothetical protein 77 48 Op 1 . - CDS 88166 - 88360 154 ## SbBS512_E4376 putative lipoprotein - Prom 88385 - 88444 3.7 - Term 88393 - 88441 3.4 78 48 Op 2 . - CDS 88448 - 89281 698 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity - Prom 89426 - 89485 4.4 + Prom 89199 - 89258 3.8 79 49 Op 1 5/0.276 + CDS 89475 - 90062 519 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 80 49 Op 2 16/0.000 + CDS 90111 - 92525 2723 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Prom 92566 - 92625 2.0 81 49 Op 3 12/0.000 + CDS 92670 - 93485 707 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 82 49 Op 4 9/0.000 + CDS 93482 - 94117 501 ## COG2864 Cytochrome b subunit of formate dehydrogenase 83 49 Op 5 . + CDS 94114 - 95043 974 ## COG3058 Uncharacterized protein involved in formate dehydrogenase formation 84 50 Tu 1 . - CDS 95259 - 95477 136 ## SFV_3606 hypothetical protein - Prom 95681 - 95740 8.8 - Term 95826 - 95864 3.0 85 51 Op 1 . - CDS 95873 - 96151 213 ## ECS88_4337 hypothetical protein 86 51 Op 2 . - CDS 96213 - 96425 106 ## Dda3937_04546 hypothetical protein 87 51 Op 3 1/0.793 - CDS 96510 - 96800 269 ## COG2944 Predicted transcriptional regulator 88 51 Op 4 . - CDS 96801 - 97112 75 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system - Prom 97293 - 97352 2.9 + Prom 97203 - 97262 3.4 89 52 Tu 1 . + CDS 97341 - 98249 390 ## COG0657 Esterase/lipase 90 53 Op 1 5/0.276 - CDS 98313 - 99254 940 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 91 53 Op 2 7/0.138 - CDS 99299 - 99736 427 ## COG1490 D-Tyr-tRNAtyr deacylase 92 53 Op 3 2/0.690 - CDS 99733 - 100605 824 ## COG1295 Predicted membrane protein 93 53 Op 4 . - CDS 100599 - 101198 670 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 101222 - 101281 2.2 94 54 Op 1 2/0.690 - CDS 101339 - 102226 531 ## COG2017 Galactose mutarotase and related enzymes 95 54 Op 2 21/0.000 - CDS 102216 - 103565 1092 ## COG0477 Permeases of the major facilitator superfamily - Term 103621 - 103658 7.8 96 54 Op 3 7/0.138 - CDS 103664 - 105097 958 ## COG0477 Permeases of the major facilitator superfamily 97 54 Op 4 . - CDS 105167 - 106177 782 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 98 54 Op 5 4/0.345 - CDS 106210 - 107097 725 ## COG3684 Tagatose-1,6-bisphosphate aldolase 99 54 Op 6 . - CDS 107122 - 108000 789 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases - Prom 108131 - 108190 6.8 + Prom 108119 - 108178 47.4 100 55 Op 1 3/0.517 + CDS 108275 - 109171 533 ## COG0524 Sugar kinases, ribokinase family 101 55 Op 2 . + CDS 109211 - 109999 503 ## COG1349 Transcriptional regulators of sugar metabolism + Term 110013 - 110056 7.2 - Term 110053 - 110082 2.1 102 56 Tu 1 . - CDS 110106 - 111929 2205 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 112164 - 112223 5.9 103 57 Tu 1 . + CDS 112302 - 113711 1693 ## COG0174 Glutamine synthetase + Term 113729 - 113760 3.1 + Prom 113795 - 113854 5.2 104 58 Op 1 14/0.000 + CDS 113885 - 114934 1115 ## COG3852 Signal transduction histidine kinase, nitrogen specific 105 58 Op 2 . + CDS 114946 - 116355 1459 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Term 116388 - 116423 0.2 + Prom 116387 - 116446 2.9 106 59 Tu 1 . + CDS 116467 - 116577 94 ## + Term 116615 - 116661 4.1 107 60 Op 1 . - CDS 116715 - 118088 1499 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 118189 - 118248 2.1 108 60 Op 2 . - CDS 118277 - 118786 604 ## COG3078 Uncharacterized protein conserved in bacteria - Prom 118875 - 118934 71.3 + Prom 119225 - 119284 5.1 109 61 Tu 1 . + CDS 119459 - 120055 739 ## COG0218 Predicted GTPase 110 62 Tu 1 . - CDS 120458 - 123244 3442 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains - Prom 123474 - 123533 4.5 111 63 Tu 1 . + CDS 123246 - 123488 59 ## UTI89_C4451 hypothetical protein + Term 123586 - 123614 -1.0 + Prom 123524 - 123583 4.5 112 64 Tu 1 . + CDS 123797 - 124540 628 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 124544 - 124587 10.0 113 65 Tu 1 . - CDS 124581 - 126011 1054 ## COG5339 Uncharacterized protein conserved in bacteria - Prom 126105 - 126164 10.4 - Term 126106 - 126153 5.1 114 66 Op 1 5/0.276 - CDS 126166 - 126792 757 ## COG0526 Thiol-disulfide isomerase and thioredoxins 115 66 Op 2 5/0.276 - CDS 126809 - 127747 615 ## COG2334 Putative homoserine kinase type II (protein kinase fold) - Prom 127792 - 127851 1.9 116 67 Tu 1 . - CDS 127872 - 128141 382 ## COG3084 Uncharacterized protein conserved in bacteria - Prom 128219 - 128278 3.3 + Prom 128127 - 128186 2.9 117 68 Op 1 11/0.000 + CDS 128211 - 128795 526 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 118 68 Op 2 . + CDS 128777 - 129304 510 ## COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein + Term 129371 - 129402 4.1 Predicted protein(s) >gi|296918710|gb|GG772990.1| GENE 1 55 - 912 678 285 aa, chain - ## HITS:1 COG:ECs4898 KEGG:ns NR:ns ## COG: ECs4898 COG0796 # Protein_GI_number: 15834152 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Escherichia coli O157:H7 # 1 285 5 289 289 528 99.0 1e-150 MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPY GEKSEVFIVERVVEIVTAVQERYPLALAVVACNTASTVSLPALREKFDFPVVGVVPAIKP AARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSL DALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLE HEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFETLEKLAVLG >gi|296918710|gb|GG772990.1| GENE 2 857 - 2701 1604 614 aa, chain - ## HITS:1 COG:ECs4897 KEGG:ns NR:ns ## COG: ECs4897 COG4206 # Protein_GI_number: 15834151 # Func_class: H Coenzyme transport and metabolism # Function: Outer membrane cobalamin receptor protein # Organism: Escherichia coli O157:H7 # 1 614 1 614 614 1148 98.0 0 MIKKASLLTACSVTAFSAWAQDTSPDTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQST SVNDVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDGVRLNLAGVSGSADLSQFP IALVQRVEYIRGPRSAVYGSDAIGGVVNIITTRDHPGTEISAGWGSNSYQNYDVSTQQQL GDKTRVTLLGDYAHTHGYDVVAYGNTGTQAQPDNDGFLSKTLYGALEHNFTDVWSGFVRG YGYDNRTNYDAYYSPGLPLVDTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNYDPH YGRYDSSATLDEMKQYTVQWANNIIIGHGNIGAGVDWQKQSTAPGTAYVEDGYDQRNTGI YLTGLQQVGDFTFEGAGRSDDNSQFGRHGTWQTSAGWEFIEGYRFIASYGTSYKAPNLGQ LYGTYGNPNLNPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLIDYDDHTLKYYNEGKAR IKGVEATANFDTGPLTHTVSYDYVDARNAITDTPLLRRAKQQVKYQLDWQLYDFDWGITY QYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYETVYGYQ TAGREYTLSGSYTF >gi|296918710|gb|GG772990.1| GENE 3 3070 - 4170 1135 366 aa, chain + ## HITS:1 COG:ECs4896 KEGG:ns NR:ns ## COG: ECs4896 COG2265 # Protein_GI_number: 15834150 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 736 99.0 0 MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLY HIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPILRHKLFQIDYLTTLSNQAVV SLLYHKKLDDEWRQQAEALRDALRAQNLNVHLIGRATKTKIALDQDYIDERLPIAGKEMI YRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEI AKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDP PRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECG VLLTAK >gi|296918710|gb|GG772990.1| GENE 4 4210 - 4569 319 119 aa, chain - ## HITS:1 COG:no KEGG:APECO1_2499 NR:ns ## KEGG: APECO1_2499 # Name: yijD # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 119 1 119 119 222 100.0 4e-57 MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMP VGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE >gi|296918710|gb|GG772990.1| GENE 5 4569 - 5273 659 234 aa, chain - ## HITS:1 COG:ECs4894 KEGG:ns NR:ns ## COG: ECs4894 COG1309 # Protein_GI_number: 15834148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 409 99.0 1e-114 MFILWYSASSTFGKDSDIVMGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREA GIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIV FSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTTIIPGNVKDE >gi|296918710|gb|GG772990.1| GENE 6 5323 - 6639 1266 438 aa, chain - ## HITS:1 COG:ECs4893 KEGG:ns NR:ns ## COG: ECs4893 COG0477 # Protein_GI_number: 15834147 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 438 1 438 438 754 97.0 0 MTAIVNETVSVKKKPSGRRVIFASAFGNALEFFDFGVYNFFVVYISTLFFPPSADHNVAL LLAFATFGVSFFMRPLGGIIVGAWADRFGRKPAMVFTIALMSLGTLMIGIAPTYETAGYW GTATLVLARLIQGVAAGGEVGASMSLLVESAPANRRGFYSSWSLATQGLATTFGGVVALG LSAWLPFATGSETVMAEWGWRVPFFIGVLLAPIGCWLRLSLENDVPEPVRNKKAATSESA FSLLLQHKATIVNGVLLAIGSTVATYISLFYYGTWAAKYLAMPQHYSHAAMLLAGVITFV GALLVGMLCDSVGRKKLILISRVMVLLCSWPSFWLLVNYPSPGMLLTVVFVMVSFTTLGG VPVMLLISELLPKRIRALGFALVYSIGVAIFGGFAQYFATQSIVLLDSLTAPAWYLGGGT LLSMLALLYVKEPAKELQ >gi|296918710|gb|GG772990.1| GENE 7 6682 - 7848 1044 388 aa, chain - ## HITS:1 COG:ECs4892 KEGG:ns NR:ns ## COG: ECs4892 COG1473 # Protein_GI_number: 15834146 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 794 99.0 0 MIEHYIRGFEEELREIRHQIHENPELGLQEFKTSALVAEKLRQWGYEVEQGLATTGVVAT LKVGDGEKSIGLRADMDALPIYENSGKPWASKHPGLMHACGHDGHTTILLGAARYFAETR RFNGTLRLIFQPAEEMINGGEIMVKEGLFDRFPCDVIFGMHNMPGLPVGKFFFQPGALMA SMDQFHITVRGCGGHGAIPHKAIDPVLVAAHITTALQSIVSRNVDPLEAAVITVGSIVAG EAANVIPDSAEMKISVRSLSRDTRQLLLTRIPALAQAQAASFGATAEVTHVNGTPVLVND EEMARFAWQVACKTFGEDRAEFGIKPLMGSEDFSFMLEAQPKGGFLLFGNGDVGEGSCMV HNPGYDFNDASLVPASSYWGALVEAWLQ >gi|296918710|gb|GG772990.1| GENE 8 8178 - 9578 431 466 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 7 453 4 443 458 170 26 3e-41 MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHWGTIPSKALRHAV SRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQGFYERNHCEILQGNARFV DEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTHPRIYDSDSILSMHHEPRHVL IYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEY EKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALQNIGLETDSRGQLKVNSMYQ TAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVG KTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEI IHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF >gi|296918710|gb|GG772990.1| GENE 9 9561 - 10478 993 305 aa, chain - ## HITS:1 COG:ECs4890 KEGG:ns NR:ns ## COG: ECs4890 COG0583 # Protein_GI_number: 15834144 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 596 100.0 1e-170 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL PALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDKV LKQAV >gi|296918710|gb|GG772990.1| GENE 10 10730 - 12013 1101 427 aa, chain - ## HITS:1 COG:ECs5316 KEGG:ns NR:ns ## COG: ECs5316 COG0477 # Protein_GI_number: 15834570 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 2 426 21 447 453 458 56.0 1e-129 MDVDVSTSVAGNKPQRIRRIQTVTLVLLFMAGIVNFLDRSSLSVAGEAIRGELGLSATEF GVLLSAFSLSYGFSQLPSGILLDRFGPRIVLGAGLIFWSLMQALTGMVNSFSHFILMRIG LGIGEAPFMPAGVKSITDWYAQKERGTALGIFNSSTVIGQAIAPPALVLMQLAWGWRTMF VIIGVAGILVGICWYAWYRNRAQFVLTEEERTYLSAPVKPRPQLQFSEWLALFKHRTTWG MILGFSGVNYTGWLYIAWLPGYLQAEQGFSLAKTGWVAAIPFLAAAVGMWVNGIVVDRLA KKGYDLAKTRKTAIVCGLMMSALGTLLVVQSSSPAQAVAFISMALFCVHFAGTSAWGLVQ VMVSETKVASIAGIQNFGSFVFASFAPIVTGWVVDTTHSFNLALVIAACVTFTGALCYFF IVKDRIE >gi|296918710|gb|GG772990.1| GENE 11 12080 - 13294 1163 404 aa, chain - ## HITS:1 COG:rspA KEGG:ns NR:ns ## COG: rspA COG4948 # Protein_GI_number: 16129539 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 404 1 404 404 809 90.0 0 MKIIAVDVFVTCPGRNFVTLKITTESGLCGLGDATLNGRELSVASYLKDHLCPQLIGRDA SRIEDIWQFFYKGAYWRRGPVTMSAISAIDMALWDIKAKAANMPLYQLLGGASREGVMVY CHTTGRTIDEVLEDYAKHQQMGFKAIRVQCGVPGMQTTYGLAKGKGLAYEPATKGLWPEE QLWSSEKYLDFTPKLFEAVRNKFGFNEHLLHDMHHRLTPIEAARFGRSIEDYRLFWMEDP TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRI VDFASLYQVRTGSHGPSDLSPVCHAAALHFDLWVPNFGVQEYMGYSEQMFEVFPHSWRFD EGYMHPGDEPGLGISFDEKLAAKYPYDPAYLPVARLEDGTLWNW >gi|296918710|gb|GG772990.1| GENE 12 13792 - 15165 1793 457 aa, chain - ## HITS:1 COG:argH KEGG:ns NR:ns ## COG: argH COG0165 # Protein_GI_number: 16131798 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Escherichia coli K12 # 1 457 1 457 457 880 99.0 0 MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEE ALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLW CKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDE SRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLS AAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQ GALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAA QQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKALEDLPLSELQKFSQVIGED VYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARLG >gi|296918710|gb|GG772990.1| GENE 13 15226 - 15999 1055 257 aa, chain - ## HITS:1 COG:ECs4888 KEGG:ns NR:ns ## COG: ECs4888 COG0548 # Protein_GI_number: 15834142 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 257 2 258 258 453 100.0 1e-127 MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKK KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGH VGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSD VSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAE QLPALFNGMPMGTRILA >gi|296918710|gb|GG772990.1| GENE 14 16010 - 17014 946 334 aa, chain - ## HITS:1 COG:argC KEGG:ns NR:ns ## COG: argC COG0002 # Protein_GI_number: 16131796 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Escherichia coli K12 # 1 334 1 334 334 648 97.0 0 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPL QPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDVAFYEKYYGF THQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVI NATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGIL ETITCRLKPGVSQVQVAQALQQAYAHKPLMRLYDKGVPALKNVVGLPFCDIGFAVQGEHL IIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI >gi|296918710|gb|GG772990.1| GENE 15 17168 - 18319 993 383 aa, chain + ## HITS:1 COG:argE KEGG:ns NR:ns ## COG: argE COG0624 # Protein_GI_number: 16131795 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli K12 # 1 383 1 383 383 795 99.0 0 MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGTRN KFNMLASCGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFI LDALRDVDVTKLAKPLYILATADEETSMAGARYFAETTALRPDCAIIGEPTSLQPVRAHK GHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQLRDNLKERYHYDAFTVPYPTLN LGHIHGGDASNRICACCELHMDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHP PIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEAPFIQTLCPTLVLGPGSINQAHQPDEY LETRFIKPTRELITQVIHHFCWH >gi|296918710|gb|GG772990.1| GENE 16 18660 - 21272 3071 870 aa, chain + ## HITS:1 COG:ppc KEGG:ns NR:ns ## COG: ppc COG2352 # Protein_GI_number: 16131794 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Escherichia coli K12 # 1 870 14 883 883 1700 99.0 0 MLGKVLGETIKDALGEHILERVETIRKLSKSSRAGNDANRQELLTTLQNLSNDELLPVAR AFSQFLNLANTAEQYHSISPKGEAASNPEVIARTLRKLKNQPELSEDTIKKAVESLSLEL VLTAHPTEITRRTLIHKMVEVNACLKQLDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRK LRPSPVDEAKWGFAVVENSLWQGVPNYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDR DGNPNVTADITRHVLLLSRWKATDLFLKDIQVLVSELSMVEATPELLALVGEEGAAEPYR YLMKNLRSRLMATQAWLEARLKGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIAN GDLLDTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRE LNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEA GIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAA SWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQ GEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVR ENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLG AGTALQKVVEDGKQNELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWP LGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQA EKEGQEPDPRVEQALMVTIAGIAAGMRNTG >gi|296918710|gb|GG772990.1| GENE 17 21455 - 23188 2008 577 aa, chain + ## HITS:1 COG:yijP KEGG:ns NR:ns ## COG: yijP COG2194 # Protein_GI_number: 16131793 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 577 1 577 577 1141 99.0 0 MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTNGIRDSLLFSSLWLIPV FLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYF SLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIKNKPFE KTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNENNALPPLANFKDESGNEPRTLV LVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLTVFNNVVTSRPYTIEILQQALTFAN EKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMTARNTMLTVFSRQTDKQYYMNQQRTQS AREYDTNVLKPFQEVLKDPAPKKLIIVHLLGTHIKYKYRYPEDQGKFDGNTEHVPPGLNA EELESYNDYDNANLYNDHVVASLIKDFKATDPNGFLVYFSDHGEEVYDTPPHKTQGRNED NPTRHMYTIPFLLWTSEKWQATHPRDFSQDVDRKYSLAELIHTWSDLAGLSYDGYDPTRS VVNPQFKETTRWIGNPYKKNALIDYDTLPYGDQVGNQ >gi|296918710|gb|GG772990.1| GENE 18 23414 - 24265 727 283 aa, chain + ## HITS:1 COG:yijO KEGG:ns NR:ns ## COG: yijO COG2207 # Protein_GI_number: 16131792 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 283 1 283 283 549 98.0 1e-156 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFIDTGAGAAL VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR IGSFLLQTLNEMQMQSQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE >gi|296918710|gb|GG772990.1| GENE 19 24252 - 24593 289 113 aa, chain - ## HITS:1 COG:frwD KEGG:ns NR:ns ## COG: frwD COG1445 # Protein_GI_number: 16131791 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Escherichia coli K12 # 1 113 1 113 113 206 99.0 1e-53 MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALGTENRLADEDIRRADVA LLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVLSAPQQTHLILE >gi|296918710|gb|GG772990.1| GENE 20 24595 - 25473 593 292 aa, chain - ## HITS:1 COG:ECs4881 KEGG:ns NR:ns ## COG: ECs4881 COG1180 # Protein_GI_number: 15834135 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 590 97.0 1e-169 MTSSAGQRISCNVVETRRNDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESI SGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGG VTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVLFDLKIMD AAQARDVVKMNLQRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLNIKQ IHLLPFHQYGEPKYRLLGKTWSMKEVSAPSSADVATMREMAERAGFQVTVGG >gi|296918710|gb|GG772990.1| GENE 21 25439 - 27736 2267 765 aa, chain - ## HITS:1 COG:ECs4880 KEGG:ns NR:ns ## COG: ECs4880 COG1882 # Protein_GI_number: 15834134 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli O157:H7 # 1 765 1 765 765 1545 99.0 0 MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVIMRRAKATAYILEHVEISIRD EELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFAISEEDKRIYREELFPYWE KRSMKDFINGQMTDEVKAATSTQIFSINQTDKGQGHIIIDYPRLLNHGLGELVAQMQQHC QQQPENHFYQAALLLLEASQKHILRYAELAETMAASCTDGQRREELLTIAEISRHNAEHK PQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYMLPFYQTSLTQGEDPAFLKELLESL WVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLTENGRSAVNVLSFLCLDAYQSVQLPQP NLGVRTNALIDTPFLMKTAETIRLGTGIPQIFNDEVVVPAFLNRGVSLEDARDYSVVGCV ELSIPGRTYGLHDIAMFNLLKVMEICLHENEGNAALTYEGLLEQIRAKISHYITLMVEGS NICDIGHRDWAPVPLLSSFISDCLEKGRDITDGGARYNFSGVQGIGIANLSDSLHALKGM IFDQQRLSFDELLSVLKANFATPEGEKVRARLINRFEKYGNDIDEVDNISAELLRHYCKE VEKYQNPRGGYFTPGSYTVSAHVPLGSVVGATPDGRFAGEQLADGGLSPMLGQDAQGPTA VLKSVSKLDNTLLSNGTLLNVKFTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNAD TLREAQQRPQDYAGLVVRVAGYSAFFVELSKEIQDDIIRRTAHQL >gi|296918710|gb|GG772990.1| GENE 22 27787 - 28107 499 106 aa, chain - ## HITS:1 COG:STM4113 KEGG:ns NR:ns ## COG: STM4113 COG1445 # Protein_GI_number: 16767378 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 106 1 106 106 162 96.0 2e-40 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA >gi|296918710|gb|GG772990.1| GENE 23 28122 - 29201 1329 359 aa, chain - ## HITS:1 COG:frwC KEGG:ns NR:ns ## COG: frwC COG1299 # Protein_GI_number: 16131787 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 1 359 1 359 359 564 99.0 1e-161 MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGAVPDAVADPNLKKLFDI GVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAGFFGALIAGIIGGIVVHYL KKIPVHKVLRSVMPIFIIPIVGTLITAGVMMWGLGEPVGALTNSLTQWLQGMQQGSIVML AVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVAIAAVGICVPPLGMGLATLIGRKN FSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVIPSIMVGSVCGAVTAALVGAQCYAG WGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVLKSLARKNGSSTEEKEDDLDLDFEIN >gi|296918710|gb|GG772990.1| GENE 24 29510 - 32011 2612 833 aa, chain + ## HITS:1 COG:ECs4877_1 KEGG:ns NR:ns ## COG: ECs4877_1 COG1080 # Protein_GI_number: 15834130 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli O157:H7 # 123 688 1 566 566 1093 98.0 0 MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRKGNAKSALALIGTDTLV GDNCQLLISGADEQEAYQRLSQWLRDEFPHCDAPLAEVKSDELEPLPVSLTNLNPQIIRA RTVCSGSAGGILTPISSLDLNALGNLPAAKGVDAEQSALENGLTLVLKNIEFRLLDSDGA TSAILEAHRSLAGDTSLREHLLAGVSAGLSCAEAIVASANHFCEEFARSSSSYLQERALD VRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTTS HTVILARSFNIPTLVGVDIAALTPWQHQTIYIDGNAGAIVVEPGESVARYYQQEARVQDA LREQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAP GESELYNIFCQALESANGRSIIVRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYAS LFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIPFDEKIQLGI MLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYA VQAVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRQL LNQAMACRTSLEVEHLLAQFRMTQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGR CRYPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFI IMLTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL >gi|296918710|gb|GG772990.1| GENE 25 32023 - 32685 729 220 aa, chain + ## HITS:1 COG:talC KEGG:ns NR:ns ## COG: talC COG0176 # Protein_GI_number: 16131784 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli K12 # 1 220 1 220 220 381 97.0 1e-106 MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLPRLQKAIGDEGILFAQT MSRDAQGMVKEAKHLRDAIPGIVVKIPVTSEGLAAIKMLKKEGITTLGTAVYSAAQGLLA ALAGAKYVAPYVNRVDAQGGDGIRTVQELQALLEMHAPESMVLAASFKTPRQALDCLLAG CESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFDTTHL >gi|296918710|gb|GG772990.1| GENE 26 32696 - 33799 1230 367 aa, chain + ## HITS:1 COG:gldA KEGG:ns NR:ns ## COG: gldA COG0371 # Protein_GI_number: 16131783 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 1 367 14 380 380 698 99.0 0 MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFAQSTVEKSFKDAGLVVE IAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKALAHFMGVPVAIAPTIAST DAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGAPARLLAAGIGDALATWFEAR ACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVIEANTYL SGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENASVEEIETVAALS HAVGLPITLAQLDIREDVPAKMRIVAEAACAEGETIHNMPGGATPDQVYAALLVADQYGQ RFLQEWE >gi|296918710|gb|GG772990.1| GENE 27 34075 - 34692 499 205 aa, chain + ## HITS:1 COG:ECs4873 KEGG:ns NR:ns ## COG: ECs4873 COG3738 # Protein_GI_number: 15834127 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 408 96.0 1e-114 MKASLALFSLLTLFTSYSLKSPAVPPTVVQIQANTNLAIADGARLQIGSTLFYDPAYVQL TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAAYPQKWQLKRPDSNIDHR RVPNLETWFTRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN IGAGAQEEDVLFSWQMVGHYRYFAK >gi|296918710|gb|GG772990.1| GENE 28 34719 - 35624 928 301 aa, chain - ## HITS:1 COG:yijE KEGG:ns NR:ns ## COG: yijE COG0697 # Protein_GI_number: 16131781 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 301 12 312 312 489 100.0 1e-138 MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLR GRGMRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGE RLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPR VDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLK NLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVSRKKKEAVSVKR I >gi|296918710|gb|GG772990.1| GENE 29 35746 - 37926 2726 726 aa, chain - ## HITS:1 COG:ECs4871 KEGG:ns NR:ns ## COG: ECs4871 COG0376 # Protein_GI_number: 15834125 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase (peroxidase I) # Organism: Escherichia coli O157:H7 # 1 726 1 726 726 1427 99.0 0 MSTSDDIHNTTATGKCPFHQGGHDQSAGGGTTTRDWWPNQLRVDLLNQHSNRSNPLGEDF DYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIRMAWHGAGTYRSIDGRGGA GRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFG FGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLS AAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGPTSNVGPDPEAAPIEEQGLGWAST YGSGVGADAITSGLEVVWTQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIP DPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKS RYIGPEVPKEDLIWQDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRG GDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVEKA ASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQ QLTLTAPEMTALVGGMRVLGANFDGSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESK ELFEGRDRETGEVKYTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNL DRFDLL >gi|296918710|gb|GG772990.1| GENE 30 38255 - 39145 878 296 aa, chain - ## HITS:1 COG:metF KEGG:ns NR:ns ## COG: metF COG0685 # Protein_GI_number: 16131779 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Escherichia coli K12 # 1 296 1 296 296 605 98.0 1e-173 MSFFHASQRDALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTY GANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPAELRIIARDYWNNGIRHIVALRGD LPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLRRKVDAGANRA ITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFD GLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRPGL >gi|296918710|gb|GG772990.1| GENE 31 39527 - 41080 1473 517 aa, chain - ## HITS:1 COG:STM4104 KEGG:ns NR:ns ## COG: STM4104 COG0737 # Protein_GI_number: 16767370 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Salmonella typhimurium LT2 # 1 517 1 517 518 967 91.0 0 MKIKILAAGIALTLPFWACAKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLV KQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNTMPFDAVTIGNHEFDHGWDNTL LQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATRV GIEARDEIKWLQRYIDELKGKVDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQVK GLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYKEKPHNFTVKNFELKTIY ADEWKPDPQTKQVIDGWNKKLDEVVQQTVAQSPVELKRAYGESAYLGNLAADALLAAAGK NTQLALTNSGGIRNEIPAGAITMGGVISTFPFPNELVTMELTGKQLRSLMEHGASLSNGV LQVSKGLEMKYDSSKPVGQRVITLTLNGKPIEDATVYHIATQSFLADGGDGFTAFTEGKA RNITGGYYVYHAVVDYFKAGNTITDEQLNGMRVKDIK >gi|296918710|gb|GG772990.1| GENE 32 41213 - 42337 198 374 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4395 NR:ns ## KEGG: ECS88_4395 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 374 1 374 374 786 100.0 0 MSTLFTINACKTFGCRNLGLASSEDYSWPDYKLGYPALHCRACGSYPPLFDEQQFRDWLS VHLSTYAIEKGHFCPVCYGTDMICYGHNPQGSQRIQCRNCKKVWTPKKYQKEITHPQAIE TVQLFIPFQGASAVQKLYVLVSLDATRGNILHLSTNYTQHQTGDSLRYSYKGNTEPTMHH RDIVQKVDMREAQFLRRSQFDEIQYGSAVLKRNGKGAILRPVITAHGHFRILKIRYPDVK THIISHECFLRGAIITAWADQFRQQQGELWFVEEEISDSNADTPWHFKGTTYHGWWQNQW QRWEQGNNCKMVCLLTGASLERGANVSLATSRCFITWLTDQHDFTQSALLSAGRVTQMLT SLALKYNESLTPSC >gi|296918710|gb|GG772990.1| GENE 33 42729 - 44120 831 463 aa, chain + ## HITS:1 COG:STM0033 KEGG:ns NR:ns ## COG: STM0033 COG0737 # Protein_GI_number: 16763423 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Salmonella typhimurium LT2 # 2 463 62 523 523 543 60.0 1e-154 MANIAGIVNEAKKKSKDVFFFDAGDYFTGPYISTLTKGEAIIDIMNTMPFDAVSVGNHEF DHGVPNMVSQLSKAKFPILLGNIYYTDTNKPVWDHPWTIIEKDGLKIGVIGLHGAFAFYD TVAAKAREGVEARDEIKYLNKALAELKGKVDITVLLIHEGVPARQSSFGSKDVERLLQAD IETAKKVNGVDVLITGHAHVGTPQPIKVNNTLIVSTDAYGTNIGKLVLDYNPKTKKIDSY NGELITIFADQFKPDTIVQNTIDKWSAKLNKITQEVVGHSPVVLTREYGSSSSTGNLILD AMMEKTPDAVAGFQNSGGMRADFPKGDITLGDVISTFPFNNDLIEMDLTGRDLKSLMTHA TNLTNGVLQVSKSVAVVYDSKKPLNQRLISFTINGKPVEDNQTYRIATHSFCASGGDGFE AFLNGKNVKTIPGTTSAESIIDYFKNHKPVTPDLTKRVMDVAK >gi|296918710|gb|GG772990.1| GENE 34 44161 - 45780 1093 539 aa, chain + ## HITS:1 COG:STM4104 KEGG:ns NR:ns ## COG: STM4104 COG0737 # Protein_GI_number: 16767370 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Salmonella typhimurium LT2 # 8 535 5 513 518 691 64.0 0 MKTAQRTLFAATLLTIFSTSVMAQDVTIIYTNDLHAHVDSYKVPYVADGKRDIGGFANIS TLVKQEKAKNKATFYFDAGDYFTGPYISSLTKGEAIIDIMNTMPFDAVSIGNHEFDHGWD NALRQLSKANFPVLLGNVYHKESEKPFWNKPYTILEKDGIKIGIVGLHGVFAFNDTVSEL SLQGLDNDNNNRFDKSSATLKNQGIEARDEVKYLQHYIDELRDKVDLTVALVHEGVPARQ SSIGNTDVRRALDKDIQTASKVKGLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDIGK LILDVNPTARTHKVKSFELKTVYADEWIPDPTTQKVINSWNKKLADLVRQPVGESSIALT RAYGESSQLGNLFTDAMLVAAPTAQIALINSGSLRADINAGTITFGDITSTFPFKNELTE MDLSGKDLRNLLEHGASLTNGILQMSKGAEMRYTLQKPVGQRIVSFKINGEEIVDTNIYH VATTTFLALGGDGFLAFKEGKNVQVRAGNNMSNVVIDYFKKGHKITPAQVNEMRVEVSK >gi|296918710|gb|GG772990.1| GENE 35 45857 - 46717 419 286 aa, chain + ## HITS:1 COG:STM0413 KEGG:ns NR:ns ## COG: STM0413 COG3248 # Protein_GI_number: 16763793 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Nucleoside-binding outer membrane protein # Organism: Salmonella typhimurium LT2 # 30 286 34 287 287 346 67.0 3e-95 MYIKKHWIALSILLIPCIGNAQEIKIDESWLHQSLNVIGRTDSRFGPRLTNDLYPEYTVA GRKDWFDFYGYVDLPKFFGVGSHYDVGIWDEGSPLFTEIEPRFSIDKLTGLNLAFGPFKE WFIANNYVYDMGDNQSSRQSTWYMGLGTDIDTGLPIKLSANIYAKYQWQNYGAANENEWD GYRFKIKYSIPLTNLFGGRLVYNSFTNFDFGSDLADKSHNNKRTSNAIASSHILSLLYEH WKFAFTLRYFHNGGQWNAGEKVNFGDGPFELKNTGWGTYTTIGYQF >gi|296918710|gb|GG772990.1| GENE 36 46935 - 49367 2683 810 aa, chain - ## HITS:1 COG:metL_1 KEGG:ns NR:ns ## COG: metL_1 COG0527 # Protein_GI_number: 16131778 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli K12 # 1 448 1 448 448 878 99.0 0 MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDMMVVSAAGSTTNQLINW LKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADNLISAFVSDLEHLAALLDSGINDA VYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAERAAQPQVDEGLSYPLLQQLL VQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADP RKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSEIDLQLRCSYTPDQGSTRIER VLASGTGARIVTSHDDVCLIEFQVPASQDFKLAHKEIDQILKRAQVRPLAVGVHNDRQLL QFCYTSEVADSALKILDEAGLPGELRLRQGLALVAMVGAGVTRNPLHCHRFWQQLKGQPV EFTWQSDDGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLVLFGKGNIGSRWLELFARE QSTLSARTGFEFVLAGVVDSRRSLLSYDGLDASRALAFFNDEAVEQDEESLFLWMRAHPY DDLVVLDVTASQQLADQYLDFASHGFHVISANKLAGASDSNKYRQIHDAFEKTGRHWLYN ATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLT EPDPRDDLSGKDVMRKLVILAREAGYNIESDQVRVESLVPAHCEGGSIDHFFENGDELNE QMVQRLEAAREMGLVLRYVARFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRD NPLVIRGPGAGRDVTAGAIQSDINRLAQLL >gi|296918710|gb|GG772990.1| GENE 37 49370 - 50530 1190 386 aa, chain - ## HITS:1 COG:ECs4868 KEGG:ns NR:ns ## COG: ECs4868 COG0626 # Protein_GI_number: 15834122 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli O157:H7 # 1 386 1 386 386 767 99.0 0 MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRA LAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVL FVDQGDEQALRAALAENPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPA LQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYL LLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAML SFELDGDEHTLRRFLGELSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLL RISTGIEDGEDLIADLENGFRAANKG >gi|296918710|gb|GG772990.1| GENE 38 50807 - 51124 470 105 aa, chain + ## HITS:1 COG:ECs4867 KEGG:ns NR:ns ## COG: ECs4867 COG3060 # Protein_GI_number: 15834121 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of met regulon # Organism: Escherichia coli O157:H7 # 1 105 1 105 105 198 100.0 2e-51 MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCE AFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY >gi|296918710|gb|GG772990.1| GENE 39 51184 - 51792 621 202 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4387 NR:ns ## KEGG: ECS88_4387 # Name: yiiX # Def: peptidoglycan peptidase # Organism: E.coli_S88 # Pathway: not_defined # 1 202 1 202 202 390 100.0 1e-107 MKIRLLIPGLLVSVPAFAWQPQTGDIIFQVSRSSQSKAIQLATHSDYSHTGMLVIRNKKP YVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFS WSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERYGKNIPLEETVVS PQAVFDAPQLTTVAKEWPLFSW >gi|296918710|gb|GG772990.1| GENE 40 51857 - 52069 384 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15804527|ref|NP_290567.1| 50S ribosomal protein L31 [Escherichia coli O157:H7 EDL933] # 1 70 1 70 70 152 100 8e-36 MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRF NKRFNIPGSK >gi|296918710|gb|GG772990.1| GENE 41 52272 - 54470 2216 732 aa, chain + ## HITS:1 COG:priA KEGG:ns NR:ns ## COG: priA COG1198 # Protein_GI_number: 16131773 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Escherichia coli K12 # 1 732 1 732 732 1454 98.0 0 MPVAHVALPVPLPRTFDYLLPEGMTVKAGSRVRVPFGKQQERIGVVVSVSDVSELPLNEL KAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA TEQGQAVDLNSLKRSPKQQQALAALRQRKIWRDQVAELEFNDAALQALRKKGLCDLASET PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA LETLCNVQQKKSRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI LASPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK VKWVLDVDPIEG >gi|296918710|gb|GG772990.1| GENE 42 54626 - 55651 868 341 aa, chain + ## HITS:1 COG:ECs4861 KEGG:ns NR:ns ## COG: ECs4861 COG1609 # Protein_GI_number: 15834115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 687 100.0 0 MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGR NVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLII TKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLY EQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPR YEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIRGSTRALP >gi|296918710|gb|GG772990.1| GENE 43 55848 - 56702 668 284 aa, chain + ## HITS:1 COG:ECs4860 KEGG:ns NR:ns ## COG: ECs4860 COG3087 # Protein_GI_number: 15834114 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 # 1 284 36 319 319 389 99.0 1e-108 MVAIAAAVLVTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPG VRAPTEPSAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQR QRQAQQLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDLLQTPA HTTAQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDS KITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG >gi|296918710|gb|GG772990.1| GENE 44 56795 - 57325 647 176 aa, chain + ## HITS:1 COG:ECs4859 KEGG:ns NR:ns ## COG: ECs4859 COG5405 # Protein_GI_number: 15834113 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease HslVU (ClpYQ), peptidase subunit # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 331 99.0 4e-91 MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFEL FERKLEMHQGHLIKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDL IAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELSYKA >gi|296918710|gb|GG772990.1| GENE 45 57335 - 58666 1205 443 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 4 443 8 466 466 468 52 1e-131 MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTG VGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNR YRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDLAAA PMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELK QDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTD HILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMA TEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQTITI DADYVSKHLDALVADEDLSRFIL >gi|296918710|gb|GG772990.1| GENE 46 58733 - 59659 1040 308 aa, chain + ## HITS:1 COG:menA KEGG:ns NR:ns ## COG: menA COG1575 # Protein_GI_number: 16131768 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Escherichia coli K12 # 1 308 1 308 308 568 99.0 1e-162 MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPLVALLALITAGLLQILS NLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIITVVLICLSGLALVAVACHT LADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLVFFGWLSVMGSWYLQAHTLIP ALILPATACGLLATAVLNINNLRDINSDRENGKNTLVVRLGAVNARRYHACLLMGSLVCL ALFNLFSLHSLWGWLFLLAAPLLVKQTRYVMREMDPVAMRPMLERTVKGALLTNLLFVLG IFLSQWAA >gi|296918710|gb|GG772990.1| GENE 47 59752 - 60237 521 161 aa, chain + ## HITS:1 COG:ECs4856 KEGG:ns NR:ns ## COG: ECs4856 COG0684 # Protein_GI_number: 15834110 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Escherichia coli O157:H7 # 1 161 1 161 161 299 100.0 1e-81 MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRV LVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAA GEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDIE >gi|296918710|gb|GG772990.1| GENE 48 60322 - 60561 506 79 aa, chain - ## HITS:1 COG:ECs4853 KEGG:ns NR:ns ## COG: ECs4853 COG3074 # Protein_GI_number: 15834107 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 79 3 81 81 85 100.0 2e-17 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKE QQNGWQERLQALLGRMEEV >gi|296918710|gb|GG772990.1| GENE 49 60992 - 61837 769 281 aa, chain + ## HITS:1 COG:ECs4852 KEGG:ns NR:ns ## COG: ECs4852 COG0580 # Protein_GI_number: 15834106 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli O157:H7 # 1 281 1 281 281 533 100.0 1e-151 MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTA GVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHH IVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAP LLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGP IVGAIVGAFAYRKLIGRHLPCDICVVEEKETTTPSEQKASL >gi|296918710|gb|GG772990.1| GENE 50 61860 - 63368 1969 502 aa, chain + ## HITS:1 COG:ECs4851 KEGG:ns NR:ns ## COG: ECs4851 COG0554 # Protein_GI_number: 15834105 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Escherichia coli O157:H7 # 1 502 1 502 502 1023 100.0 0 MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSST LVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDG LEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVH VTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPI SGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVN YALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPY ARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLM QFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTER NYRYAGWKKAVKRAMAWEEHDE >gi|296918710|gb|GG772990.1| GENE 51 63550 - 64560 1241 336 aa, chain + ## HITS:1 COG:glpX KEGG:ns NR:ns ## COG: glpX COG1494 # Protein_GI_number: 16131763 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Escherichia coli K12 # 1 336 1 336 336 620 100.0 1e-177 MRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIMLNQVNIDGTIVIGEGEI DEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALAVLAVGDKGCFLNAPDMYM EKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVTILAKPRHDAVIAEMQQLGVR VFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMNGRLLARHDVKG DNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSDNVIFSATGITKGDLLEGISRKGNI ATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVHIL >gi|296918710|gb|GG772990.1| GENE 52 64657 - 65403 776 248 aa, chain + ## HITS:1 COG:ECs4849 KEGG:ns NR:ns ## COG: ECs4849 COG1018 # Protein_GI_number: 15834103 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 494 97.0 1e-140 MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEIEGERVQRAYSYVNSPDN PDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPDCETLWMLATGTAIGP YLSILQLGKDLERFKNMVLVHAARYAADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGS LTGRLPALIESGELESAVGLPINKETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPG HMTAEHYW >gi|296918710|gb|GG772990.1| GENE 53 65408 - 65836 394 142 aa, chain - ## HITS:1 COG:ECs4848 KEGG:ns NR:ns ## COG: ECs4848 COG0589 # Protein_GI_number: 15834102 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 142 1 142 142 280 100.0 8e-76 MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQ LLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLM PAYRGMINKLSADLLIVPFIDK >gi|296918710|gb|GG772990.1| GENE 54 65863 - 66162 372 99 aa, chain - ## HITS:1 COG:ECs4847 KEGG:ns NR:ns ## COG: ECs4847 COG3691 # Protein_GI_number: 15834101 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 99 1 99 99 160 100.0 6e-40 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAAASSADEG ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA >gi|296918710|gb|GG772990.1| GENE 55 66374 - 66814 431 146 aa, chain - ## HITS:1 COG:ECs4846 KEGG:ns NR:ns ## COG: ECs4846 COG3152 # Protein_GI_number: 15834100 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 146 1 146 146 260 100.0 6e-70 MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDIQTAAFCLVCLLWPTAA VTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVGRFVPTLILVMMLIDLGAF VGTQGENKYGKDTQDVKYKADNKSSN >gi|296918710|gb|GG772990.1| GENE 56 66915 - 67514 528 199 aa, chain + ## HITS:1 COG:no KEGG:E2348C_4224 NR:ns ## KEGG: E2348C_4224 # Name: yiiQ # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 1 199 1 199 199 347 99.0 2e-94 MKPGCTLFFLLCSALTVTTTAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSL PLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIKSIQITWLPIQGPEQKAAK AKAQAYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYYTETEGALRYVVADNGEKGLT FAVEPIKLALSESLEGLNK >gi|296918710|gb|GG772990.1| GENE 57 67622 - 68389 893 255 aa, chain + ## HITS:1 COG:ECs4844 KEGG:ns NR:ns ## COG: ECs4844 COG0149 # Protein_GI_number: 15834098 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 454 100.0 1e-128 MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIM LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQG LTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATP AQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKAD AFAVIVKAAEAAKQA >gi|296918710|gb|GG772990.1| GENE 58 68444 - 69199 573 251 aa, chain - ## HITS:1 COG:ECs4843 KEGG:ns NR:ns ## COG: ECs4843 COG2134 # Protein_GI_number: 15834097 # Func_class: I Lipid transport and metabolism # Function: CDP-diacylglycerol pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 504 97.0 1e-143 MKKAGLLFLVMIVIAVVATGIGYWKLTGEESDTLRKIVLEQCLPNQQENQNPSPCAEVKP NAGYVVLKDRHGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSQKYGQPVP DRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLAR RVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQSDNSFVLLATQRNLLTLNRASAE EIQDHQCEILR >gi|296918710|gb|GG772990.1| GENE 59 69306 - 70295 1147 329 aa, chain - ## HITS:1 COG:sbp KEGG:ns NR:ns ## COG: sbp COG1613 # Protein_GI_number: 16131755 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 329 1 329 329 645 99.0 0 MKKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFSAHWKQQTGDNVVIRQS HGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWIKRLPDNSAPYTSTIVFLV RKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQVKAQDFVRA LYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLAANELGKDKFEIVTPSESILAEP TVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAKNYYRPRDAEVAKKYENAFPKLKLF TIDEEFGGWTKAQKEHFANGGTFDQISKR >gi|296918710|gb|GG772990.1| GENE 60 70615 - 71577 1260 320 aa, chain - ## HITS:1 COG:ECs4841 KEGG:ns NR:ns ## COG: ECs4841 COG0205 # Protein_GI_number: 15834095 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 634 100.0 0 MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSD MINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPC IGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSSHQRISVVEVMGRYCGDLTLA AAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFIEKETG RETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHHDIIDA IENMKRPFKGDWLDCAKKLY >gi|296918710|gb|GG772990.1| GENE 61 71758 - 72660 546 300 aa, chain - ## HITS:1 COG:ECs4840 KEGG:ns NR:ns ## COG: ECs4840 COG0053 # Protein_GI_number: 15834094 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Escherichia coli O157:H7 # 1 300 1 300 300 557 99.0 1e-159 MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVV RYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLVSPTPMTDPGVGVIV TIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADA LFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSWPGVSGAHDLRTRQSG PTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSVVPREGKRSMLS >gi|296918710|gb|GG772990.1| GENE 62 72861 - 73361 257 166 aa, chain - ## HITS:1 COG:ECs4839 KEGG:ns NR:ns ## COG: ECs4839 COG3678 # Protein_GI_number: 15834093 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli O157:H7 # 1 151 2 152 167 209 99.0 3e-54 MRIVTAAVMASTLAVSSLSHAAEVGSGDNCHPGEELTQRSTQSHMFDGISLTEHQRQQMR DLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKMANEQIARQVEMAKVRNQM YRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSLKLLSSSNSRSQ >gi|296918710|gb|GG772990.1| GENE 63 73511 - 74209 938 232 aa, chain + ## HITS:1 COG:ECs4838 KEGG:ns NR:ns ## COG: ECs4838 COG0745 # Protein_GI_number: 15834092 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 232 1 232 232 406 99.0 1e-113 MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGI DTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHW SEQQQNNDNGSPTLEVDALSLNPGRQEATFDGQTLELTGTEFTLLYLLAQHLGQVVSREH LSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS >gi|296918710|gb|GG772990.1| GENE 64 74206 - 75579 1357 457 aa, chain + ## HITS:1 COG:ECs4837 KEGG:ns NR:ns ## COG: ECs4837 COG0642 # Protein_GI_number: 15834091 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 816 100.0 0 MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELAND PPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQK KKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLL WLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQ RLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQK NALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRN ALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLG LAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS >gi|296918710|gb|GG772990.1| GENE 65 75685 - 76359 529 224 aa, chain - ## HITS:1 COG:ECs4836 KEGG:ns NR:ns ## COG: ECs4836 COG2258 # Protein_GI_number: 15834090 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 224 11 234 234 459 98.0 1e-129 MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTDLGLEGDEQAEKKIHGGPDRALCHY PREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYIGDIFRWGEALIQVSQPRSPC YKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGLVSADAPLELVSRVSDVTVQEAAAIAWH MPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK >gi|296918710|gb|GG772990.1| GENE 66 76508 - 77497 959 329 aa, chain - ## HITS:1 COG:no KEGG:ECSE_4198 NR:ns ## KEGG: ECSE_4198 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: E.coli_SE11 # Pathway: not_defined # 1 329 13 341 341 500 99.0 1e-140 MEMQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCM GASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAM DMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPF LVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTG IPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVT SILVPILTSIWSRKVKARAAKIEILGTVK >gi|296918710|gb|GG772990.1| GENE 67 77751 - 78371 567 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 206 1 201 201 223 53 5e-57 MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQAYVNNANAALESLPEFANLPVEELITK LDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKA AASRFGSGWAWLVQKGDKLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQN RRPDYIKEFWNVVNWDEAAARFAAKK >gi|296918710|gb|GG772990.1| GENE 68 78656 - 79690 1270 344 aa, chain + ## HITS:1 COG:rhaT KEGG:ns NR:ns ## COG: rhaT COG0697 # Protein_GI_number: 16131747 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 344 1 344 344 602 98.0 1e-172 MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPN FWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI INGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLVLAVM CGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVK DLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYV LCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVAANIVGIGMAN >gi|296918710|gb|GG772990.1| GENE 69 79687 - 80625 629 312 aa, chain - ## HITS:1 COG:rhaR KEGG:ns NR:ns ## COG: rhaR COG2207 # Protein_GI_number: 16131746 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 312 1 312 312 635 99.0 0 MAFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFASDQQAVAVADRYPQDV FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC PERLKLNLDWQGAIPGFNASAGQPHWRLGSVGMAQARQVIGQLEHESSQHVPFANEMAEL LFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT PSQWRHLNSQKD >gi|296918710|gb|GG772990.1| GENE 70 80609 - 81445 401 278 aa, chain - ## HITS:1 COG:rhaS KEGG:ns NR:ns ## COG: rhaS COG2207 # Protein_GI_number: 16131745 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 278 1 278 278 526 98.0 1e-149 MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQEQDGQYPSHWRVNHSV LQQVRQLVAQMEQQEEENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL EDHFADEVNWDAVADQFSLSLRTLHRQLKQKTGLTPQRYLNRLRLMKARHLLRHSEASVT DIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ >gi|296918710|gb|GG772990.1| GENE 71 81733 - 83202 1265 489 aa, chain + ## HITS:1 COG:ECs4831 KEGG:ns NR:ns ## COG: ECs4831 COG1070 # Protein_GI_number: 15834085 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli O157:H7 # 1 489 1 489 489 1005 98.0 0 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWNVDSLESAI RLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGK RDIYQRSGIQFLPFNTIYQLRALTEQQPELIPHIAHALLIPDYFSYRLTGKMNWEYTNAT TTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGL WLLQRVLQERQINDLPALIAATQALPACRFIINPNDDRFINPDEMCSEIQAACRETAQPI PESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIR VIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHS TRQTKELCA >gi|296918710|gb|GG772990.1| GENE 72 83199 - 84458 1285 419 aa, chain + ## HITS:1 COG:rhaA KEGG:ns NR:ns ## COG: rhaA COG4806 # Protein_GI_number: 16131743 # Func_class: G Carbohydrate transport and metabolism # Function: L-rhamnose isomerase # Organism: Escherichia coli K12 # 1 419 1 419 419 852 98.0 0 MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQ ATGNYPGKARNASELRADLEQAMRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVE WAKANQLGLDFNPSCFSHPLSADGFTLSHADDRIRQFWIDHCKASRRVSAYFGEQLGTPS VMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVG SNEFYLGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVL LDDETQAIASEIVRHDLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAEL RKLEAAGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSEWLENVRTYEKEILSRRG >gi|296918710|gb|GG772990.1| GENE 73 84735 - 85559 832 274 aa, chain + ## HITS:1 COG:rhaD KEGG:ns NR:ns ## COG: rhaD COG0235 # Protein_GI_number: 16131742 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 274 1 274 274 570 99.0 1e-163 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQ PMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPTSELPA HFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGV GILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQILVK VYSMGGMKQTISREELIALGQRFGVTPLASALAL >gi|296918710|gb|GG772990.1| GENE 74 85569 - 85883 289 104 aa, chain + ## HITS:1 COG:yiiL KEGG:ns NR:ns ## COG: yiiL COG3254 # Protein_GI_number: 16131741 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 104 1 104 104 193 97.0 6e-50 MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKAHNLLFATVEIES EERWNAVASTDVCQRWWKYMTDVMPANADNSPVSSELQEVFYLP >gi|296918710|gb|GG772990.1| GENE 75 85924 - 87318 1528 464 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4347 NR:ns ## KEGG: ECS88_4347 # Name: not_defined # Def: glycoporin # Organism: E.coli_S88 # Pathway: not_defined # 1 464 1 464 464 906 100.0 0 MKKSTLSLAIGLLLACSTGMAKTQHLTLEQRMALLEERLEAAEMRAAKAEGQVKQLQTQQ AAEIREIKTAQGNTPVNGQSTTESEKKNATPPNLLLSGYGDLKIYGDVEFNMDAESNHGL LAMTNADVNSDPTNEQWNLNGRILLGFDGMRKLDNGYFAGFSAQPLGDMHGSVNIDDAVF FFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTV SAAMEANVVNNAYGYTDSKGNFVDQSDRTGYGMSMTWNGLKTDPENGIVVNLNTAYLDAN NEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCWIDDEGTYNIHTIHASYQFAN VMDMENFNIYLGTYYSILDSDGDKIHGDDSDDRYGARVRFKYFF >gi|296918710|gb|GG772990.1| GENE 76 87672 - 88052 257 126 aa, chain - ## HITS:1 COG:no KEGG:ECED1_4600 NR:ns ## KEGG: ECED1_4600 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 126 59 184 184 234 99.0 9e-61 MISAKQINNLISQDKFDAEAAMKKVSELETLVAQAKEADKSGMNFSFINSAGQYQLEAKK YVRRIRDKVPYSDWDKEQLQDANSSWMAEDSFPRALCDYNEMVDEIFQLIVIAGRVCDEH GYVTKS >gi|296918710|gb|GG772990.1| GENE 77 88166 - 88360 154 64 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E4376 NR:ns ## KEGG: SbBS512_E4376 # Name: not_defined # Def: putative lipoprotein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 57 134 190 315 114 98.0 2e-24 MALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTQENYKDDAFAKGKTLHQTFLKIWK PLNL >gi|296918710|gb|GG772990.1| GENE 78 88448 - 89281 698 277 aa, chain - ## HITS:1 COG:ECs4821 KEGG:ns NR:ns ## COG: ECs4821 COG1526 # Protein_GI_number: 15834075 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 572 100.0 1e-163 MKKTQQKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVALVYNGISHVVMMASPK DLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSSRRFMGLKERRRALAGRTG CGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDFQPVGQLTGCTHAAAWMLPSG ELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSSRASYEMVQKSAMCGVEILFAVS AATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLSN >gi|296918710|gb|GG772990.1| GENE 79 89475 - 90062 519 195 aa, chain + ## HITS:1 COG:fdoG KEGG:ns NR:ns ## COG: fdoG COG0243 # Protein_GI_number: 16131734 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 195 1 195 1016 412 100.0 1e-115 MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLL MYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDK WQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKF SRALGMLAVDNQARV >gi|296918710|gb|GG772990.1| GENE 80 90111 - 92525 2723 804 aa, chain + ## HITS:1 COG:fdoG KEGG:ns NR:ns ## COG: fdoG COG0243 # Protein_GI_number: 16131734 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 804 213 1016 1016 1682 99.0 0 MTNHWVDIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYY APIRSGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRK YDKSTWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCE YIAETSAHDKTASFLYALGWTQHSIGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSMMKAF FGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNKNKVIGC LSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENGSIVNSGRW LQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNYAIPHEPSSEE VAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIFAGSWTPEGNQMA RRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQLLKWDGTKWTGWDIP DYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPA ARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAILQPEQFVEIGESLANKLG IAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIGIPIHWGYEGVAKKGFIANTL TPFVGDANTQTPEFKSFLVNVEKV >gi|296918710|gb|GG772990.1| GENE 81 92670 - 93485 707 271 aa, chain + ## HITS:1 COG:fdoH KEGG:ns NR:ns ## COG: fdoH COG0437 # Protein_GI_number: 16131733 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 271 30 300 300 569 99.0 1e-162 MAKLIDVTTCIGCKACQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQND KLEWLIRKDGCMHCSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPR LNPEDNRVYKCTLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYD NAGLYDPAGVGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATF AASIFHYVGVGPNRADEEENNLHEEKDEERK >gi|296918710|gb|GG772990.1| GENE 82 93482 - 94117 501 211 aa, chain + ## HITS:1 COG:ECs4818 KEGG:ns NR:ns ## COG: ECs4818 COG2864 # Protein_GI_number: 15834072 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 390 100.0 1e-108 MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARILHPFV GVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAII FLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITA MVEGWVTSAWAKKHHPRWYREVRKTTEKKAE >gi|296918710|gb|GG772990.1| GENE 83 94114 - 95043 974 309 aa, chain + ## HITS:1 COG:ECs4817 KEGG:ns NR:ns ## COG: ECs4817 COG3058 # Protein_GI_number: 15834071 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in formate dehydrogenase formation # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 618 99.0 1e-177 MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLRELAENNPLGDYLRFAALI AHAQEVVLYDHPLEMDLTTRIKEASAQGKPPLDIHVLPRDKHWQKLLMALIAELKPEMSG PALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFIWAALSLYWAQMANLIPGKAR AEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLCETEWHVVRVKCSNCEQSGKLHY WSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAVADDLASLVLDARMEQEGYARSSIN PFLFPGEGE >gi|296918710|gb|GG772990.1| GENE 84 95259 - 95477 136 72 aa, chain - ## HITS:1 COG:no KEGG:SFV_3606 NR:ns ## KEGG: SFV_3606 # Name: yiiE # Def: hypothetical protein # Organism: S.flexneri_8401 # Pathway: not_defined # 1 72 49 120 120 120 90.0 2e-26 MAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQRDEA VGVEELCKQHKE >gi|296918710|gb|GG772990.1| GENE 85 95873 - 96151 213 92 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4337 NR:ns ## KEGG: ECS88_4337 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 92 1 92 92 176 100.0 3e-43 MSTFNTRKDRDRNGKAKPHKHSGIPTLTGKWRHPSMDCWVNYSTPGDHEWKRLYTTLRRR ADDRRQCHRVMQGDDPEGIVWFPDCYPQIYYY >gi|296918710|gb|GG772990.1| GENE 86 96213 - 96425 106 70 aa, chain - ## HITS:1 COG:no KEGG:Dda3937_04546 NR:ns ## KEGG: Dda3937_04546 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii_3937 # Pathway: not_defined # 3 67 16 80 83 63 58.0 4e-09 MTRNRAERRHHMVRLKKIRCRYRTAGDGSKKASGICFRTPCICSCWMCGHRRYHNGPRVS EIRAKARYAN >gi|296918710|gb|GG772990.1| GENE 87 96510 - 96800 269 96 aa, chain - ## HITS:1 COG:STM4033 KEGG:ns NR:ns ## COG: STM4033 COG2944 # Protein_GI_number: 16767298 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 13 94 1 82 84 135 87.0 2e-32 MDKALFERLTHSMAQMNEIIEGTRQPSRTFEVDAMKIKEIRRASGLSQSKFADLISVSVD TLRNWEQGRRSPTGPAKALLRAIANDPQHVLQALNR >gi|296918710|gb|GG772990.1| GENE 88 96801 - 97112 75 103 aa, chain - ## HITS:1 COG:VCA0468 KEGG:ns NR:ns ## COG: VCA0468 COG2026 # Protein_GI_number: 15601229 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Vibrio cholerae # 2 103 4 105 110 73 41.0 7e-14 MLFIETEIFTEDVQKLLNDDEFSRFQFFLALNPDYGEVIPETGGLRKVRWVSGGKGKRAG VRVIYFHQVKHYEIRLLLIYRKGIKDDLSPQEKAMLRLLNTRW >gi|296918710|gb|GG772990.1| GENE 89 97341 - 98249 390 302 aa, chain + ## HITS:1 COG:STM4032 KEGG:ns NR:ns ## COG: STM4032 COG0657 # Protein_GI_number: 16767297 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Salmonella typhimurium LT2 # 1 299 1 299 309 471 75.0 1e-133 MALEKGIAELVEEFIAAGRPSSRQQSITQRREGYIASAVLAGETETRVDIQTIELEGMTL RIVSPLNAPTLLPTIIYYYGGCFVSGGFATHDNQLRQLAYYGQCRIIAVQYRLAPEHTFP AAHDDAQRGAELVRQHAERLGVDKQRITLAGDSAGGHLALVTALRLKRAGEWQPAQLILI YPMLDATAHFESYIRNGHDYIITRDTLLSGFEMYLPGIERRHPEASPIWRNDFNGLPPVH IITAEYDPLCDEGEALYHRMTGQGVQCTCQRYLGVIHGFFQLGGISEAARSALRDVAWRA GR >gi|296918710|gb|GG772990.1| GENE 90 98313 - 99254 940 313 aa, chain - ## HITS:1 COG:ECs4811 KEGG:ns NR:ns ## COG: ECs4811 COG0454 # Protein_GI_number: 15834065 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 313 17 329 329 625 100.0 1e-179 MYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEQGNLVAVGR LYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKL GFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQLQQAWYEHIPLSEKMGVRIQ QYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLMLRERHLGGTIILADAHI RYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDETPGAVFEGTYIVLPAK PFGPYEEGGNEEE >gi|296918710|gb|GG772990.1| GENE 91 99299 - 99736 427 145 aa, chain - ## HITS:1 COG:ECs4810 KEGG:ns NR:ns ## COG: ECs4810 COG1490 # Protein_GI_number: 15834064 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Escherichia coli O157:H7 # 1 145 1 145 145 276 100.0 8e-75 MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNT QTGRFAADMQVSLVNDGPVTFWLQV >gi|296918710|gb|GG772990.1| GENE 92 99733 - 100605 824 290 aa, chain - ## HITS:1 COG:ECs4809 KEGG:ns NR:ns ## COG: ECs4809 COG1295 # Protein_GI_number: 15834063 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 528 100.0 1e-150 MLKTIQDKARHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAA FPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNKMTAVGACGLIVTALLLMYSI DSALNTIWRSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQAAEQEEDDEP >gi|296918710|gb|GG772990.1| GENE 93 100599 - 101198 670 199 aa, chain - ## HITS:1 COG:yihX KEGG:ns NR:ns ## COG: yihX COG1011 # Protein_GI_number: 16131725 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli K12 # 1 199 8 206 206 411 98.0 1e-115 MLYIFDLGNVIVDIDFNRVLGAWSDLTRVPLATLKKSFHMGEAFHQHERGEISDEAFAEA LCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEE YPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPDDTVFFDDNADNIEGANQLGIT SILVKDKTTIPDYFAKVLC >gi|296918710|gb|GG772990.1| GENE 94 101339 - 102226 531 295 aa, chain - ## HITS:1 COG:RSc1083 KEGG:ns NR:ns ## COG: RSc1083 COG2017 # Protein_GI_number: 17545802 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Ralstonia solanacearum # 22 209 21 217 323 74 30.0 2e-13 MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHDGARITSLKAFGSEVLR QWQPQRRAFQYGCFPMVPWAGRLGNATLNAGGQCYSLPANKPPHALHGMACYSTWEIIDK TADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHSYADTFPASAGWHPWFAKKLT PQNTESLQVLFDADWQEEAGSDELPTGNRISPQVGPWDDCFGFYDGVKVKLLWPGKLAMT MTSSANSLVVFDKQPDATCINPLTQAPNAINLTPEFVTPDKPLVIETRWQFTPES >gi|296918710|gb|GG772990.1| GENE 95 102216 - 103565 1092 449 aa, chain - ## HITS:1 COG:ECs2778 KEGG:ns NR:ns ## COG: ECs2778 COG0477 # Protein_GI_number: 15832032 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 18 429 21 433 438 327 41.0 4e-89 MSEKLPAPREGLSGKAMRRVVMGSFAGALMEWYDFFIFGTAAGLVFSPLFYPDSDPFIGL IASFATFGVGFLTRPLGGIVFGHFGDKIGRKITLIWTLAIVGCSTFLIGFIPTYQEIGIW APLVLMVLRLIQGFGLGGEYGGAALMTIESAPESRRGFLGSLPQTAASVGIMLATGIFAL CNHFLTSEQFLSWGWRIPFWLSAVMLIVGLFIRLHTEETLDFQKQKTTNNKEKSVPPLIE LFKKHPRNILLALGARLAESVSSNIINAFGIVYISSQLALSRDIPLTGMLIASAIGIFSC PLVGWLSDRIGQKSLYLSGAGFCVLFAFPFFLLLDSKSTLIIWCSMILGYNLGPTMMFAV QPTLFTRMFGTKVRYTGLSFAYQFSAILGGLSPLIASSLLALGGGKPWYVALFLFAVSVL SFVCVWLIEPTDEQETASYRYIREQSHEN >gi|296918710|gb|GG772990.1| GENE 96 103664 - 105097 958 477 aa, chain - ## HITS:1 COG:Ta1391 KEGG:ns NR:ns ## COG: Ta1391 COG0477 # Protein_GI_number: 16082368 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermoplasma acidophilum # 34 429 32 415 459 105 26.0 3e-22 MSQITSPATYSISRPQDVIDIVNKNSAINTSIGVIFIALGGILIDAYQAAMVGFGNKYIA AQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPS IWWVLVCRVIMGFGLGIDFPLATNAVAELRGSTSKKTGTSVNLWQMAWYVSTTVVYLVLL PLLLSGIAEEQLWRYGIFIGAIFAVIFMILRYFFIGESAMWAARVGRYQEACDILGKRYG VQAHVAASGTTEAKFSEKAENKYSGGYGILFNDRYRKRTILGCVVATMQAWQYNAVGVYL PLTLAGIISGGLTGALTGSAVVNALCGVTGGMIGSFILQRLGTRRQSMYGFAVVTLALLS LGALATTNPWLSLGLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAI AGLIFWPMLWGALKTEAFYWLAIVPFLGFLTCVLINWEPLGANVDAEDAEVLAELKK >gi|296918710|gb|GG772990.1| GENE 97 105167 - 106177 782 336 aa, chain - ## HITS:1 COG:STM1506 KEGG:ns NR:ns ## COG: STM1506 COG1063 # Protein_GI_number: 16764851 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 26 334 21 338 339 135 31.0 1e-31 MDKITQVLFSDIGKVTTQYVEVPHQQLKPHEVRIAPVFYGICGSDLHVLKGGHPFAKPPV VPGHEIAARVTEVGSDVKNVQPGDHVVVDPIMACMECRACKAGRFNLCEPPQVAGFRAPG FARSQHIVPARNCHVAPASLPLKVLAFAEPAACARHCVNRMPKASLESVLVIGAGTIGLS IVQALRIMGAGKITVIEPDAAKRALALKLGAAEVWAPGELAADVRFTGAIDVVAAQATLN DACTRVYAGGTVVCMGVPSGPREIPLPMMQRFERDLLNSGMYIPEDFDAVIEWLADGRFD TSELVTDLFAIEDAAAAFERAQQNDSIKVMLQFAPE >gi|296918710|gb|GG772990.1| GENE 98 106210 - 107097 725 295 aa, chain - ## HITS:1 COG:STM4022 KEGG:ns NR:ns ## COG: STM4022 COG3684 # Protein_GI_number: 16767287 # Func_class: G Carbohydrate transport and metabolism # Function: Tagatose-1,6-bisphosphate aldolase # Organism: Salmonella typhimurium LT2 # 8 295 4 291 292 370 67.0 1e-102 MSSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPIADSVLTDFKVAATRIL SPYASAVLADKQFCLEQIVEQGAVANSCGLIVAADLFIPGNGIPVDSVEIDMSVDPHKAR EMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVSIIEPVVRPPRRGWDFDRESA IVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQLNDQMKMPWVILSSGVDADIFGR AVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDVSVPRLQRLAEIVDEGIAQR >gi|296918710|gb|GG772990.1| GENE 99 107122 - 108000 789 292 aa, chain - ## HITS:1 COG:ECs4805 KEGG:ns NR:ns ## COG: ECs4805 COG2084 # Protein_GI_number: 15834059 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 292 1 292 298 395 72.0 1e-110 MATIAFLGLGQMGSPMANNLLQKGHSLQVFDVNTQAVDALVTQGATAAQTPAEAAASAEF IITMLPNGDIVRQVLLGEKGVCETVSSDALVIDMSTIHPLQTDALIRELQEKGINMMDAP VGRTSVNAIDGTLLILAGGTDEQIARARPILMCMGNELVEAGGPGMGIRVKLINNYMSIA LNALSSEAAVLCESLGLNLDVAIKVMSGTAAGKGHFTTTWPGKVLKGDLSPAFMVDLALK DLRIAVDVARKTGAPLNMGIAAESYYAAASQDGKGRQDWSALLNQVRQQAGL >gi|296918710|gb|GG772990.1| GENE 100 108275 - 109171 533 298 aa, chain + ## HITS:1 COG:yihV KEGG:ns NR:ns ## COG: yihV COG0524 # Protein_GI_number: 16131723 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 1 297 3 299 300 384 67.0 1e-106 MTRIACVGITVQDRIYSLPTLPEGGGKYQANHYLEIGGGPAATAAVAIAKLGVEVDFIGR VGDDSCGNTLLAELEGWGVNTAFCRRYPHARSSQSAILVDQHGERIIVNYPSPDLGTDAE WLEAIDFSRYDLILADVRWHSGTEKAFSLARLAGVTTLLDADMTPQDISPLVALADHAVF STPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGSLWIEDGHLCQQEAFSVNVVDTT GAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCTQPGGRAGIPNREQTESFLSLYA >gi|296918710|gb|GG772990.1| GENE 101 109211 - 109999 503 262 aa, chain + ## HITS:1 COG:ECs4807 KEGG:ns NR:ns ## COG: ECs4807 COG1349 # Protein_GI_number: 15834061 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 260 9 268 269 357 71.0 2e-98 MSIIEVTGNPRHDQLVHLIAERGYMNIEELAQLLDVSTQTVRRDIRKLSEQGLITRHHGG AGRVSSVMNTAFEQRELSLTAEKRAIAEAVADYLPERCTVFITIGTTVEAVARALLNRRD LRIITNSLRVAQILYKNQDIEVMVPGGTLRAHNGGIIGPGAVDFIEGFRADYLITSIGAI EHDGTLLEFDVNEALVARTMIKHARNTLLVADHTKFAASAAVSIGNARNVRAFFTDAPPP NSFCQLLSEENVELVVAEQEVS >gi|296918710|gb|GG772990.1| GENE 102 110106 - 111929 2205 607 aa, chain - ## HITS:1 COG:ECs4793 KEGG:ns NR:ns ## COG: ECs4793 COG1217 # Protein_GI_number: 15834047 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Escherichia coli O157:H7 # 1 607 1 607 607 1205 100.0 0 MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKN TAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYG LKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMA EDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTII DSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPAL SVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSG RGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALG ERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEV GQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTG KKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRA NRAPKDD >gi|296918710|gb|GG772990.1| GENE 103 112302 - 113711 1693 469 aa, chain + ## HITS:1 COG:ECs4792 KEGG:ns NR:ns ## COG: ECs4792 COG0174 # Protein_GI_number: 15834046 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Escherichia coli O157:H7 # 1 469 1 469 469 960 99.0 0 MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKG INESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRSTG IADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWNSSTQYEGGNKGHRPAVKGGY FPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK YVVHNVAHRFCKTATFMPKPMFGDNGSGMHCHMSLSKNGVNLFAGDKYAGLSEQALYYIG GVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVSSPKARRIEVR FPDPAANPYLCFAALLMAGLDGIKNKIHPGEAMDKNLYDLPPEEAKEIPQVAGSLEEALN ELDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV >gi|296918710|gb|GG772990.1| GENE 104 113885 - 114934 1115 349 aa, chain + ## HITS:1 COG:ECs4791 KEGG:ns NR:ns ## COG: ECs4791 COG3852 # Protein_GI_number: 15834045 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrogen specific # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 657 99.0 0 MATGTQPDAGQILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS LNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDGMILLEMAPMDNQRRLSQE QLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRN LVDRLLGPQLPGTRITESIHKVAERVVTLVSMELPNNVRLIRDYDPSLPELAHDPDQIEQ VLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTL FYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPIRK >gi|296918710|gb|GG772990.1| GENE 105 114946 - 116355 1459 469 aa, chain + ## HITS:1 COG:ECs4790 KEGG:ns NR:ns ## COG: ECs4790 COG2204 # Protein_GI_number: 15834044 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli O157:H7 # 1 469 1 469 469 910 99.0 0 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGM DGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAIS HYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHA LHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHR LNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQL ENTCRWLTVMAAGQEVLIQDLPGELFESNVPESTSHMQPDSWATLLAQWADRALRSGHQN LLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME >gi|296918710|gb|GG772990.1| GENE 106 116467 - 116577 94 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS >gi|296918710|gb|GG772990.1| GENE 107 116715 - 118088 1499 457 aa, chain - ## HITS:1 COG:ECs4789 KEGG:ns NR:ns ## COG: ECs4789 COG0635 # Protein_GI_number: 15834043 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 # 1 457 3 459 459 934 99.0 0 MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQAVARYPERPLSLYVHIP FCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNK AQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQR LVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVF NYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFARPDDELAVA QREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQNQKELKQYYQQVDEQGNALWRG IALTRDDCIRRDVIKSLICNFRLDYAPIEQQWDLLFADYFAEDLKLLAPLAKDGLVDVDE KGIQVTAKGRLLIRNICMCFDTYLRQKARMQQFSRVI >gi|296918710|gb|GG772990.1| GENE 108 118277 - 118786 604 169 aa, chain - ## HITS:1 COG:yihI KEGG:ns NR:ns ## COG: yihI COG3078 # Protein_GI_number: 16131706 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 169 1 169 169 209 98.0 2e-54 MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGSRAAGGNTTSGSKGQNA PKDPRIGSKTPIPLGVAEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGET LSAEEQSWVDVKLDRIDELMQKLGLSYDDDEEEEEDEKQEDMMRLLRGN >gi|296918710|gb|GG772990.1| GENE 109 119459 - 120055 739 198 aa, chain + ## HITS:1 COG:ECs4787 KEGG:ns NR:ns ## COG: ECs4787 COG0218 # Protein_GI_number: 15834041 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 198 13 210 210 374 99.0 1e-104 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEW AVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQK LDTWFSEMQPVEETQDGE >gi|296918710|gb|GG772990.1| GENE 110 120458 - 123244 3442 928 aa, chain - ## HITS:1 COG:polA_2 KEGG:ns NR:ns ## COG: polA_2 COG0749 # Protein_GI_number: 16131704 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Escherichia coli K12 # 289 928 1 640 640 1227 99.0 0 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT LAREAEKTGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK EVAYLSYQLATIKTDVELELTCEQLEVQPPAAEELLGLFKKYEFKRWTADVEAGKWLQAK GAKPAARPQETSVADEAPEVTATVISYDNYVTILDEETLKEWIAKLEKAPVFAFDTETDS LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI HQLMENCTRLDVPLLVEVGRGENWDQAH >gi|296918710|gb|GG772990.1| GENE 111 123246 - 123488 59 80 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C4451 NR:ns ## KEGG: UTI89_C4451 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 80 1 80 80 144 100.0 9e-34 MSVPVYQIMGKGCHRQDENMSFSPLFVKIFCRSSGSLANRHVDNFVHKLFTSLLIYYHAF YSMVFVFVFHAVKNKAIPNN >gi|296918710|gb|GG772990.1| GENE 112 123797 - 124540 628 247 aa, chain + ## HITS:1 COG:ECs4785 KEGG:ns NR:ns ## COG: ECs4785 COG0204 # Protein_GI_number: 15834039 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Escherichia coli O157:H7 # 1 247 64 310 310 516 99.0 1e-146 MYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMN KYFLKQQLAWVPFLGLACWALDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPT TIVNFVEGSRFTQEKHQQTHSSFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNR QPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLM SSQRQEK >gi|296918710|gb|GG772990.1| GENE 113 124581 - 126011 1054 476 aa, chain - ## HITS:1 COG:yihF KEGG:ns NR:ns ## COG: yihF COG5339 # Protein_GI_number: 16131702 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 476 15 490 490 894 96.0 0 MIRKSATGAIVALAVIWGGGTWYTGTQIQPGVEKFIKGFNDAKKKGEHAYDMTLSYKNFD KGFFNSRFQMQMTFDNGAPDLNIKPGQKIVFDVDVEHGPLPITMLMHGNVIPALAAAKVN LVNNELTQPLFIAAKNKSPVEATLRFAFGGPFSTTLDVAPAEYGKFSFGEGQFTFNGDDS SLSNLDIEGKVEDIVLQFSPMNKVTAKSFTIDSLTRLEEKKFPVGESESKFNQVNIINQG EVVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVR QFIIQYNIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVRWKNALG ELNANLDISIADPAKSSSSTNKDIKSLNFDMKLPLNVATETAKQLNLSEGMDAEKAQKRA DKQISGMMTLGLMLQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH >gi|296918710|gb|GG772990.1| GENE 114 126166 - 126792 757 208 aa, chain - ## HITS:1 COG:ECs4783 KEGG:ns NR:ns ## COG: ECs4783 COG0526 # Protein_GI_number: 15834037 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 408 99.0 1e-114 MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLH ISDNVKKKLPEGVKMTKYHVNFMGGDLGKELTQAWAVAMALGVEDKVTVPLFEGVQKTQT IRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQL NPQGMDTSNMDVFVQQYADTVKYLSEKK >gi|296918710|gb|GG772990.1| GENE 115 126809 - 127747 615 312 aa, chain - ## HITS:1 COG:yihE KEGG:ns NR:ns ## COG: yihE COG2334 # Protein_GI_number: 16131700 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Escherichia coli K12 # 1 312 17 328 328 636 99.0 0 MDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQ LVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTG RKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL RLHGDCHAGNILWRDGPMFVDLDDARNGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFS EFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTVTFIEQAKV LQEPPLQLTPMY >gi|296918710|gb|GG772990.1| GENE 116 127872 - 128141 382 89 aa, chain - ## HITS:1 COG:ECs4781 KEGG:ns NR:ns ## COG: ECs4781 COG3084 # Protein_GI_number: 15834035 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 89 1 89 89 158 100.0 3e-39 MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSA KDAVIPGLQKDYEEDFKTALLRARGVIKE >gi|296918710|gb|GG772990.1| GENE 117 128211 - 128795 526 194 aa, chain + ## HITS:1 COG:ECs4780 KEGG:ns NR:ns ## COG: ECs4780 COG0746 # Protein_GI_number: 15834034 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Escherichia coli O157:H7 # 1 194 1 194 194 385 94.0 1e-107 MNLMTMITGVVLAGGKARRMGGVDKGLLELNGKPLWQYVADALMTQLSHVVINANRHQEI YQVSGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPHDLAARLTHQRKDA PVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAFMRLAGGHAVDFSDRKEAFIN VNTPEELARWQEKR >gi|296918710|gb|GG772990.1| GENE 118 128777 - 129304 510 175 aa, chain + ## HITS:1 COG:mobB KEGG:ns NR:ns ## COG: mobB COG1763 # Protein_GI_number: 16131697 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein # Organism: Escherichia coli K12 # 6 175 1 170 170 329 98.0 2e-90 MAGKTMIPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYEL RKAGAAQTIVASQQRWALMTETPDEEELDLHFLASRMDTSKLDLILVEGFKHEEIAKIVL FRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQKQDG Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:38:10 2011 Seq name: gi|296918709|gb|GG772991.1| Escherichia coli MS 110-3 genomic scaffold Scfld46, whole genome shotgun sequence Length of sequence - 1054 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 1 - 1054 99.0 # EU761659 [D:1..1363] # 16S small subunit ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:38:11 2011 Seq name: gi|296918708|gb|GG772992.1| Escherichia coli MS 110-3 genomic scaffold Scfld51, whole genome shotgun sequence Length of sequence - 3108 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 87 - 392 337 ## ECS88_1014 chaperone-modulator protein CbpM 2 1 Op 2 . - CDS 392 - 1312 979 ## COG2214 DnaJ-class molecular chaperone - Prom 1482 - 1541 4.3 + Prom 1568 - 1627 6.2 3 2 Tu 1 . + CDS 1847 - 3088 1352 ## ECS88_1016 glucose-1-phosphatase/inositol phosphatase (EC:3.1.3.10) Predicted protein(s) >gi|296918708|gb|GG772992.1| GENE 1 87 - 392 337 101 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1014 NR:ns ## KEGG: ECS88_1014 # Name: cbpM # Def: chaperone-modulator protein CbpM # Organism: E.coli_S88 # Pathway: not_defined # 1 101 1 101 101 190 100.0 2e-47 MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPSEIQETTWVFDDHAAIVVQRAVRLR HELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP >gi|296918708|gb|GG772992.1| GENE 2 392 - 1312 979 306 aa, chain - ## HITS:1 COG:cbpA KEGG:ns NR:ns ## COG: cbpA COG2214 # Protein_GI_number: 16128966 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Escherichia coli K12 # 1 306 1 306 306 611 99.0 1e-175 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQ RRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDI EIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQG TPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGTKVTVPTLKESILLT IPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPR KDWGKA >gi|296918708|gb|GG772992.1| GENE 3 1847 - 3088 1352 413 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1016 NR:ns ## KEGG: ECS88_1016 # Name: agp # Def: glucose-1-phosphatase/inositol phosphatase (EC:3.1.3.10) # Organism: E.coli_S88 # Pathway: Glycolysis / Gluconeogenesis [PATH:ecz00010]; Microbial metabolism in diverse environments [PATH:ecz01120] # 1 413 1 413 413 837 100.0 0 MNKTLIAATVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNK WPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPDTVYAYANSLQRTVAT AQFFITGAFPGCDIHVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDS YKLLEQIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYY EGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRT SAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIE YVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDSVLNEAVK Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:38:20 2011 Seq name: gi|296918707|gb|GG772993.1| Escherichia coli MS 110-3 genomic scaffold Scfld54, whole genome shotgun sequence Length of sequence - 1193 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 960 931 ## COG5525 Bacteriophage tail assembly protein 2 1 Op 2 . + CDS 944 - 1150 197 ## ECS88_0572 head stabilization protein (head protein GP3) Predicted protein(s) >gi|296918707|gb|GG772993.1| GENE 1 1 - 960 931 319 aa, chain + ## HITS:1 COG:Z2131 KEGG:ns NR:ns ## COG: Z2131 COG5525 # Protein_GI_number: 15801568 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli O157:H7 EDL933 # 1 319 336 654 654 655 99.0 0 FHIWTAYSPFTTWVQIVYDWLDALKDPNGLKTFVNTTLGETWEEAVGEKLDHQVLMDKVV RYTAAVPARVVYLTAGIDSQRNRFEMYVWGWAPGEEAFLVDKIIIMGRPDEEETLLRVDV AINKKYRHADGTEMTISRVCWDTGGIDGEIVYQRSKKHGVFRVLPVKGASVYGKPVITMP KTRNQRGVYLCEVGTDTAKEILYARMKADPTPADEATSYAIRFPDDPEIFSQTEAQQLVA EELVEKWEKGKMRLLWDNKKRRNEALDCLVYAYAALRVSVQRWQLDLAVLAKSREEETTR PTLKELAAKLSGGVNGYSR >gi|296918707|gb|GG772993.1| GENE 2 944 - 1150 197 68 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0572 NR:ns ## KEGG: ECS88_0572 # Name: not_defined # Def: head stabilization protein (head protein GP3) # Organism: E.coli_S88 # Pathway: not_defined # 1 68 1 68 68 102 100.0 6e-21 MVTVAELQALRQARLDLLTGKRVVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRCR RRPLGVRL Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:38:22 2011 Seq name: gi|296918706|gb|GG772994.1| Escherichia coli MS 110-3 genomic scaffold Scfld60, whole genome shotgun sequence Length of sequence - 516 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 277 - 313 7.0 1 1 Tu 1 . - CDS 364 - 471 80 ## EFER_3527 small toxic polypeptide LdrD (modular protein) Predicted protein(s) >gi|296918706|gb|GG772994.1| GENE 1 364 - 471 80 35 aa, chain - ## HITS:1 COG:no KEGG:EFER_3527 NR:ns ## KEGG: EFER_3527 # Name: not_defined # Def: small toxic polypeptide LdrD (modular protein) # Organism: E.fergusonii # Pathway: not_defined # 1 35 49 83 83 70 100.0 2e-11 MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:38:25 2011 Seq name: gi|296918705|gb|GG772995.1| Escherichia coli MS 110-3 genomic scaffold Scfld61, whole genome shotgun sequence Length of sequence - 2675 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 869 279 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 + Prom 969 - 1028 6.0 2 2 Tu 1 . + CDS 1125 - 2168 507 ## ECS88_4719 SHI-2 pathogenicity island protein + Term 2170 - 2214 0.1 Predicted protein(s) >gi|296918705|gb|GG772995.1| GENE 1 3 - 869 279 288 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 16 268 158 402 406 112 27 4e-25 NRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL TTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDID NAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHD PRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNG VRAAYIHKAEHLEERRLMLQWWADFLDANREECISPFEYAKVNNPLKR >gi|296918705|gb|GG772995.1| GENE 2 1125 - 2168 507 347 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4719 NR:ns ## KEGG: ECS88_4719 # Name: not_defined # Def: SHI-2 pathogenicity island protein # Organism: E.coli_S88 # Pathway: not_defined # 1 347 11 357 357 719 100.0 0 MTGKLRFEVNDNQGCFIFPETWFGSLLDEFEELIDAYDADEISETSYINKLRRLARQEND FIDVHAHLAYVFLEQNAPRKALNAALKGLAVGNRLIPEGFSGRIIWIHPDNRPFLRALYA AILANAHLRRHQDAIMLIEKILDYNPEDNHGARWLLGPELLRTGAHEQARHILQEHADEF SPYWYELGLLHFLNGELVKAATAFRRGFAANTYIAEILCGNLHPFPLAVWHNFSGGPDTA EDYYATYHPLWGQYPEALLFVNWLYNHSSVLHERAEIIKCAEMLMQEDDFEICESILRQQ EKLRERIDETLSEKIVQKCRNMNGEYVWPWILPFSAAGMKHTGIQYQ Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:38:35 2011 Seq name: gi|296918704|gb|GG772996.1| Escherichia coli MS 110-3 genomic scaffold Scfld62, whole genome shotgun sequence Length of sequence - 16386 bp Number of predicted genes - 15, with homology - 15 Number of transcription units - 7, operones - 5 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 108 - 167 3.1 1 1 Tu 1 . + CDS 247 - 2031 856 ## COG4928 Predicted P-loop ATPase 2 2 Tu 1 . + CDS 2445 - 2783 187 ## ECS88_4695 hypothetical protein + Term 2961 - 3007 -0.8 + Prom 3689 - 3748 4.1 3 3 Op 1 . + CDS 3890 - 4084 124 ## ECS88_4696 hypothetical protein 4 3 Op 2 . + CDS 4081 - 4806 223 ## COG0084 Mg-dependent DNase - Term 5167 - 5204 -0.5 5 4 Op 1 . - CDS 5359 - 5934 415 ## ECS88_4699 hypothetical protein 6 4 Op 2 . - CDS 5888 - 7270 375 ## ECS88_4700 hypothetical protein - Prom 7291 - 7350 5.4 7 5 Op 1 1/0.000 - CDS 7405 - 7590 134 ## COG3436 Transposase and inactivated derivatives 8 5 Op 2 23/0.000 - CDS 7611 - 8225 325 ## COG2801 Transposase and inactivated derivatives - Term 8390 - 8422 -0.4 9 5 Op 3 1/0.000 - CDS 8480 - 8767 244 ## COG2963 Transposase and inactivated derivatives 10 5 Op 4 . - CDS 8837 - 9184 265 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 9332 - 9391 5.1 11 6 Op 1 7/0.000 - CDS 9837 - 10016 137 ## COG1662 Transposase and inactivated derivatives, IS1 family 12 6 Op 2 . - CDS 10223 - 10495 140 ## COG3677 Transposase and inactivated derivatives - Prom 10736 - 10795 9.1 + Prom 10609 - 10668 8.2 13 7 Op 1 10/0.000 + CDS 10748 - 12217 1079 ## COG0531 Amino acid transporters 14 7 Op 2 10/0.000 + CDS 12322 - 14691 1627 ## COG1982 Arginine/lysine/ornithine decarboxylases + Term 14710 - 14749 5.0 15 7 Op 3 . + CDS 14766 - 16265 1079 ## COG0531 Amino acid transporters + Term 16296 - 16336 6.0 Predicted protein(s) >gi|296918704|gb|GG772996.1| GENE 1 247 - 2031 856 594 aa, chain + ## HITS:1 COG:AGpA30 KEGG:ns NR:ns ## COG: AGpA30 COG4928 # Protein_GI_number: 16119253 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 540 1 554 632 327 34.0 6e-89 MWSDKESSEDYLNFGEVSQLAVDVLTTKDMLPVSIGIFGNWGAGKSSLLKLIEQKLEQDD KDWIVINFDSWLYQGYDDTRAALLEVIATELTKAAEGNSALISKTKRLLSRVDGFRAMGL LAEGTALMAGLPTGGLLSRGIGALRNITDGIQSQEEYEALGNIAKEGKETACGLIKPQTK KSPPQQIDAFRKEYGEILEELGKPLIVVIDNLDRCLPANAIHTLEAIRLFLFLTNTAFII AADEDMIRSSVADYFKGASQRHQIDYLDKLIQVPIRVPKAGVREIRSYLFMLYAIEHGLE GEKITMLREGLEKALQQSWKDEPISRQEALKMTGEADDSNLALAFARADRIAPILANSPI IHGNPRIVKRLLNVVKMRSQIAKRRAMPLDEAIITKLVIFERCVGVDGTADLYHLVDIEQ GVPQILKQLDDNGGQIPTDAPKTWTDSPTTKSFISQWAQLEPRLGGIDLRAAIYLSRETM PIGAYVVGLSPSGREVLNALIELKNTSSPTAENLLKALPREEQIPVMEGLINQLRQVSDW DRKPRGFSGACLLARYSTDAASILIRYLQELQLGMKRPAWMTAALKDEQWNKDA >gi|296918704|gb|GG772996.1| GENE 2 2445 - 2783 187 112 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4695 NR:ns ## KEGG: ECS88_4695 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 112 139 250 250 230 100.0 1e-59 MNHALVEALDGVEIFDPQKITDGVIVDTMIGYLAESIFLQMVMDSNRAWNKADTPSKAIH AEIELRELIKVVVDKHMAPKLAGNIRSFTRNQMVKIERQAIIEAWQEWEAYQ >gi|296918704|gb|GG772996.1| GENE 3 3890 - 4084 124 64 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4696 NR:ns ## KEGG: ECS88_4696 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 64 376 439 439 135 100.0 7e-31 MNEIDRRDDLIALRIAITQKSTLKIGTWIAKSGPLPTAEFDNFKQVFKDGLDEVESYLLS ENIV >gi|296918704|gb|GG772996.1| GENE 4 4081 - 4806 223 241 aa, chain + ## HITS:1 COG:AGpA25 KEGG:ns NR:ns ## COG: AGpA25 COG0084 # Protein_GI_number: 16119250 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 238 2 239 256 242 48.0 6e-64 MSIDMHCHLDLYPRPDLVAEESKRRGTYILSVTTTPKAWHGTSLLAKESQRIRTALGLHP QIAHQRSHELDLFDSLLSETKYVGEIGLDGGQGFKEHWDIQLKVFRHILNSVNRAGGKIM TIHSRGSASAVLDEIENIDGVAILHWFTGTPKQLERAIDLGCWFSVGPAMLDTIKGKALV LKIPKSRILTETDGPFAKFRNDPLMPWDSGIAEKQLAALWGISQMEVNAQLVDNFKVLCT S >gi|296918704|gb|GG772996.1| GENE 5 5359 - 5934 415 191 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4699 NR:ns ## KEGG: ECS88_4699 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 191 1 191 191 362 100.0 3e-99 MTQSEMLKLIARHGYNVGFGAKKNFATYDLICKASGWISFISLAVGVFALFIPELATNVI SAILIIFGVATMYIQFYDSEKQSYESAGIEQTKIFNELEVIYRNVKSDANFDYQRTQQSI DAIMSRFYGTVISKQIFGSNWYAHYKFYCEFEKAWVEEELNLTLKDKIPLSLCFLASLAI IFTIAVIWKTP >gi|296918704|gb|GG772996.1| GENE 6 5888 - 7270 375 460 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4700 NR:ns ## KEGG: ECS88_4700 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 442 1 442 442 904 100.0 0 MSHRELFSEFLENLNLDLKQAKKISYHYRKITKSLNLAFRGTSSRVANRLKVGSVGRHTA IKGISDLDMLYIMPPNQYEYYNRKDNGQSALLTDVRNILAEEYPDQTVKKDRLVVQIIFK NFYVEVQPVFRQDDDSFKFPESYNGGAWRITKPLHEKAAMTAFSRDKSNNLRKLCKMIRA WKNLHGVNMGGLLIDTLAYRFLSSTSDYDNTGNGSLGALARDFFEYLSNEERKERYLALG SNQHVRVKSPWFGRAAKHAYELCCDALDAEGAASENDRWRKVFGRAFPRRKVGIMEARLG LESHAADAVPWTDTEEFIEDKYPVDIRYSLNLDCTVTQDGFPPRSLREMLIRRFRLSARK SLLFRADLTEMEAEEPYTVMWKVLNVGDEARRRNMIRGQIVSDGGYCTKKETTDFRGDHM VECYVIKNEVVVARAQIEVPISLGFYDAIRDAEINRPTWL >gi|296918704|gb|GG772996.1| GENE 7 7405 - 7590 134 61 aa, chain - ## HITS:1 COG:ECs1339 KEGG:ns NR:ns ## COG: ECs1339 COG3436 # Protein_GI_number: 15830593 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 61 477 537 537 135 96.0 3e-32 MFFGSDHGGERGALLYGLIGTCRLNDIDPEAYLSHILSVLPEWPSNRVDELLPWNVVLTN K >gi|296918704|gb|GG772996.1| GENE 8 7611 - 8225 325 204 aa, chain - ## HITS:1 COG:mlr6150 KEGG:ns NR:ns ## COG: mlr6150 COG2801 # Protein_GI_number: 13475138 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 1 196 87 282 286 202 50.0 4e-52 MKRVGIKAQVGYRSPRARKGEASIMSPNRLQRQFNPDAPDERWVTDITYIRTHEGWLYLA VVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWRRNPEKQVLVHSDQGSQYTSHEWQSFL KSHGLEGSMSRRGNCHDNAVAESFFQLLKRERIKKKIYGMREEARSDIFDYIEMFYNSKR RHGSSEQMSPTEYENQYYQRLGSV >gi|296918704|gb|GG772996.1| GENE 9 8480 - 8767 244 95 aa, chain - ## HITS:1 COG:yi91a KEGG:ns NR:ns ## COG: yi91a COG2963 # Protein_GI_number: 16128240 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 87 13 99 134 152 96.0 2e-37 MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPI TPEQIEIRKLRKKLQRIEMENEILKKAAYFAKLSD >gi|296918704|gb|GG772996.1| GENE 10 8837 - 9184 265 115 aa, chain - ## HITS:1 COG:STM3376 KEGG:ns NR:ns ## COG: STM3376 COG0604 # Protein_GI_number: 16766671 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Salmonella typhimurium LT2 # 3 115 2 114 324 156 62.0 1e-38 MFKSLLISKMYGRHSAQIAEIAESELPQGDVEVNVDCSSINYKDALAITGRGPIVRHFPM VPGIDFAGTVSASSHPEYQTGDKVLLTGWGVGEKHWGGLSEKARVKGDWLTPLPA >gi|296918704|gb|GG772996.1| GENE 11 9837 - 10016 137 59 aa, chain - ## HITS:1 COG:ECs1301 KEGG:ns NR:ns ## COG: ECs1301 COG1662 # Protein_GI_number: 15830555 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli O157:H7 # 1 46 61 106 145 66 71.0 2e-11 MLTSDDWDSYGRVVPKNKHLTGKIFTQRIERNNLTLRTHIKRLARKQSASHAQLRSTKK >gi|296918704|gb|GG772996.1| GENE 12 10223 - 10495 140 90 aa, chain - ## HITS:1 COG:YPO0981 KEGG:ns NR:ns ## COG: YPO0981 COG3677 # Protein_GI_number: 16121285 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 86 1 86 87 132 75.0 1e-31 MASVNIHCPRCQSAQVYRHGQNPKGRDRFRCRDCHRVFQLTYTYQARKPGMKEMITEMAF NGAGVRDTARTLKIGINTIIRTLKNSHQRK >gi|296918704|gb|GG772996.1| GENE 13 10748 - 12217 1079 489 aa, chain + ## HITS:1 COG:CPn1031 KEGG:ns NR:ns ## COG: CPn1031 COG0531 # Protein_GI_number: 15618939 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Chlamydophila pneumoniae CWL029 # 5 481 2 479 485 425 50.0 1e-118 MHIDSTEKNNKQKLGLLALTSIVVSSMIGSGVDGLPQNMAENSAVGPVAIAWIVCGIGMF FISRTFIVLSNIRPDLQSGVYMYAREGFGRFTAFNVAWGYWLMTIFSNVAFAIMVMDTLN YFLPGDFKGGNNIPSVIGASLLIWGFNFLVLSGTRIAGSINIVGTLAKLIPLVAFIIILM LFMKYTTFADNVWGHSASKASQDLGSIFSQVTSPLSVALWSFIGVEGAVALSGRAKNKRD VGKATFIGFVVSLIICLLVSILPFGVLTQHELSAIPTPSTAGILKIVVGEWGKIMIILGV LISVLTSWLAWTIICAELPMVAAQNGTFPKPFSKKNVKGSASVSLYISSAFMQIVVLLVY FSNDAWLAMLAISTLTVLPAYLMTTAYLFKLCISGEYASYTTNHSRSAALVSSIIGFVFC LFMFYASEIKYLAMVPVLLTLGVPLFIWARKKDDRADKIFTLRELAFFILLLVLDIIVFI LLHYKTIHF >gi|296918704|gb|GG772996.1| GENE 14 12322 - 14691 1627 789 aa, chain + ## HITS:1 COG:STM4296 KEGG:ns NR:ns ## COG: STM4296 COG1982 # Protein_GI_number: 16767546 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Salmonella typhimurium LT2 # 7 750 4 744 756 588 39.0 1e-167 MKFNHNLLFISSQYLDGDNPSQQVLEELQTELAERGFKIHITHQISDGLKIIEKSPQYSG IGFYWEPDNPTFAEELQHFISIFRKRNATTPLIIFSEQNITDRIPLDVLKEVSEYVYLFS ESAAFTANRLYSLVHRYADKLLPPYFKTLKDFTEDGDYYWDCPGHMGGMAYLKHPVGIEF INFFGENMMRADIGVATAEMGDYLIHAGPPKKSEEIAARLFGSDWTFYGVSGSSGSNRIV AQAAVGADEIAIIDRNCHKSLNHGLTLSQARPVYLKPTRNAWGLIGPIPTGRLKKASIDA LVANSRLASGAVSQSPSYAVVTNCTYDGFCYNVNDVVRHLGESAPRIHFDEAWYAYARFH PLYQSRYAMDAEETPNRPTLFAVQSTHKMLPSLSMASMIHVKKSDRAPLNFDDFNDAFMM HGTTSPYYPIIASIDVAVSMMEGESGYSLVQESIEEAIAFRKAVVSVKRQLQEQEGGDAW FFDVLQPTEVQDSDSGQRYSFEEAPVSLLSHSADCWSLRSGERWHGFADDDLVETNSMLD PVKVTLTCPGIGPKGEYQKNGIPGYLLTRFLDDRRIEIARTGDYTVLILFSVGITKGKWG TLIESLLAFKKHYDNDDLATDAIPSLKAHSPHYDTLTLKELCQIMHEKMDELELMSHIND AVNTDPEPVMTPAEAYQKVVRYKTEHIRLDDFSGRIAASMLVPYPPGIPVLMPGERMPQG NKGIIGYLRALQEFDKQFPGFEHEIQGVNVDENGDFWVRAIVEEERDGQSLPGHITFKRQ VSGIKKGRQ >gi|296918704|gb|GG772996.1| GENE 15 14766 - 16265 1079 499 aa, chain + ## HITS:1 COG:CPn1031 KEGG:ns NR:ns ## COG: CPn1031 COG0531 # Protein_GI_number: 15618939 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Chlamydophila pneumoniae CWL029 # 20 499 11 485 485 405 47.0 1e-112 MAEQSSDVKNSDNSAGGHKLGLISLIAIVVSSMLGGGVFSLPQNTAASSALGPVIIAWII AGIGIYFIANSFRVLSDLRPDLQAGVYMYAQEGFGSFIGFNVAWGYWLMTAFGNVAFAVI LMDAFNQFMPGVFTDGNNLNSIICGSVLIWGYNFLVLSGTKVAGFVNTLGTIAKLVPLIL FVLLLGVLIDYSDLFKNFWGESPAILSGNGNDAAPVSLLSQILAPMTVTLWAFIGVEGAV VLSGRAKNKQDVGKATLIGFLLALIIYMLMSILPFGVMPQAELAQVSNPSTAGVLAHVVG QWGDWLMSAGLIISVLAGWLAWTMLCAEIPMVAGQKGAFPRAFARTNSKQAANVSLWVSS FVMQAAMLLVYFSNNAWTTMYNISALMVVPAYITTTLYLTSICRNGKYDQYAKKGRRLAL SSGVLGSLFCLFILYASQIEYVALIPILLTCGLPVFIWSRKEKNDGQPIFTKKELIYLIM LLLCDIIVVALFIGGYLKV Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:40:34 2011 Seq name: gi|296918703|gb|GG772997.1| Escherichia coli MS 110-3 genomic scaffold Scfld73, whole genome shotgun sequence Length of sequence - 311867 bp Number of predicted genes - 285, with homology - 284 Number of transcription units - 141, operones - 74 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 431 311 ## COG0582 Integrase - TRNA 629 - 704 84.1 # Phe GAA 0 0 - Term 585 - 616 4.1 2 2 Tu 1 . - CDS 810 - 1517 524 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump - Prom 1726 - 1785 3.8 + Prom 1737 - 1796 3.8 3 3 Tu 1 . + CDS 1916 - 4051 1865 ## COG1982 Arginine/lysine/ornithine decarboxylases + Term 4063 - 4096 -0.4 - Term 4045 - 4090 12.1 4 4 Tu 1 . - CDS 4100 - 5356 1534 ## COG0477 Permeases of the major facilitator superfamily - Prom 5462 - 5521 6.2 5 5 Op 1 . - CDS 5558 - 5722 63 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 6 5 Op 2 6/0.097 - CDS 5780 - 6712 822 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 7 5 Op 3 11/0.000 - CDS 6774 - 7049 339 ## COG2924 Fe-S cluster protector protein 8 5 Op 4 . - CDS 7077 - 8129 1085 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 - Prom 8239 - 8298 2.5 + Prom 8198 - 8257 3.6 9 6 Op 1 4/0.371 + CDS 8290 - 9009 747 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase 10 6 Op 2 . + CDS 9009 - 9335 449 ## COG3171 Uncharacterized protein conserved in bacteria 11 7 Tu 1 . + CDS 9522 - 10238 923 ## APECO1_3563 hypothetical protein + Term 10248 - 10294 5.1 + Prom 10274 - 10333 6.0 12 8 Tu 1 . + CDS 10414 - 11460 1306 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D + Term 11468 - 11500 5.4 + Prom 11489 - 11548 5.1 13 9 Tu 1 . + CDS 11577 - 12584 763 ## ECS88_3238 hypothetical protein 14 10 Op 1 13/0.000 - CDS 12669 - 13805 1194 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 15 10 Op 2 2/0.710 - CDS 13798 - 14391 1007 ## PROTEIN SUPPORTED gi|26249375|ref|NP_755415.1| putative deoxyribonucleotide triphosphate pyrophosphatase 16 10 Op 3 6/0.097 - CDS 14399 - 14689 298 ## COG1872 Uncharacterized conserved protein 17 10 Op 4 5/0.194 - CDS 14686 - 15252 757 ## COG0762 Predicted integral membrane protein 18 10 Op 5 . - CDS 15270 - 15974 624 ## COG0325 Predicted enzyme with a TIM-barrel fold - Prom 16019 - 16078 3.0 + Prom 15684 - 15743 3.5 19 11 Tu 1 . + CDS 15992 - 16972 807 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT + Term 17191 - 17220 0.5 - Term 16991 - 17027 1.1 20 12 Op 1 8/0.032 - CDS 17146 - 17562 531 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 21 12 Op 2 2/0.710 - CDS 17562 - 18125 621 ## COG1678 Putative transcriptional regulator - Prom 18162 - 18221 3.2 - Term 18143 - 18199 3.4 22 13 Op 1 2/0.710 - CDS 18234 - 19184 352 ## PROTEIN SUPPORTED gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme 23 13 Op 2 3/0.484 - CDS 19197 - 19928 581 ## COG1385 Uncharacterized protein conserved in bacteria - Prom 19955 - 20014 19.2 24 14 Op 1 6/0.097 - CDS 20016 - 20726 513 ## COG2356 Endonuclease I - Prom 20748 - 20807 4.3 25 14 Op 2 4/0.371 - CDS 20821 - 21318 392 ## COG3091 Uncharacterized protein conserved in bacteria - Term 21346 - 21377 2.9 26 15 Tu 1 . - CDS 21440 - 22834 1730 ## COG0477 Permeases of the major facilitator superfamily - Prom 22935 - 22994 10.4 - Term 23216 - 23248 3.0 27 16 Tu 1 . - CDS 23271 - 24425 1366 ## COG0192 S-adenosylmethionine synthetase + Prom 25140 - 25199 4.0 28 17 Tu 1 . + CDS 25220 - 27196 2269 ## COG1166 Arginine decarboxylase (spermidine biosynthesis) + Prom 27224 - 27283 10.7 29 18 Tu 1 . + CDS 27357 - 28088 617 ## ECS88_3220 hypothetical protein + Term 28156 - 28200 7.4 + Prom 28145 - 28204 3.0 30 19 Tu 1 . + CDS 28224 - 29144 1216 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 31 20 Tu 1 . - CDS 29348 - 30106 794 ## COG0501 Zn-dependent protease with chaperone function - Prom 30128 - 30187 5.0 + Prom 30246 - 30305 3.8 32 21 Tu 1 . + CDS 30384 - 32375 2408 ## COG0021 Transketolase + Term 32570 - 32607 2.2 - Term 32412 - 32478 27.2 33 22 Tu 1 . - CDS 32683 - 33591 985 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs - Prom 33611 - 33670 2.6 + Prom 33756 - 33815 7.8 34 23 Op 1 3/0.484 + CDS 33968 - 34411 403 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 35 23 Op 2 2/0.710 + CDS 34439 - 35827 1626 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component 36 23 Op 3 2/0.710 + CDS 35842 - 37119 1399 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 37 23 Op 4 3/0.484 + CDS 37116 - 37304 199 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins + Prom 37364 - 37423 1.5 38 24 Op 1 3/0.484 + CDS 37453 - 37962 333 ## COG3722 Transcriptional regulator 39 24 Op 2 . + CDS 37959 - 38672 448 ## COG1072 Panthothenate kinase - Term 38472 - 38508 5.5 40 25 Op 1 3/0.484 - CDS 38644 - 39321 186 ## PROTEIN SUPPORTED gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 41 25 Op 2 34/0.000 - CDS 39315 - 39992 374 ## COG1122 ABC-type cobalt transport system, ATPase component 42 25 Op 3 . - CDS 39980 - 40687 359 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 43 25 Op 4 . - CDS 40688 - 41266 687 ## ECUMN_3274 putative ABC-type transport system 44 25 Op 5 . - CDS 41289 - 41720 380 ## COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif - Prom 41942 - 42001 6.1 45 26 Op 1 26/0.000 + CDS 42092 - 43111 826 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 46 26 Op 2 9/0.032 + CDS 43161 - 44324 1405 ## COG0126 3-phosphoglycerate kinase + Term 44334 - 44364 3.0 + Prom 44339 - 44398 6.7 47 27 Tu 1 4/0.371 + CDS 44539 - 45618 1164 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 45643 - 45671 2.1 + Prom 45666 - 45725 3.9 48 28 Tu 1 . + CDS 45809 - 46669 980 ## COG0668 Small-conductance mechanosensitive channel + Term 46678 - 46717 5.0 + Prom 46721 - 46780 5.7 49 29 Op 1 5/0.194 + CDS 46808 - 47440 628 ## COG1279 Lysine efflux permease 50 29 Op 2 2/0.710 + CDS 47533 - 48273 724 ## COG2968 Uncharacterized conserved protein + Term 48296 - 48329 -0.3 + Prom 48289 - 48348 3.4 51 30 Tu 1 . + CDS 48431 - 49327 720 ## COG0583 Transcriptional regulator 52 31 Tu 1 . - CDS 49324 - 50379 917 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit - Prom 50496 - 50555 4.1 - Term 50535 - 50569 4.5 53 32 Tu 1 . - CDS 50582 - 51475 787 ## COG0583 Transcriptional regulator - Prom 51505 - 51564 1.7 + Prom 51515 - 51574 3.4 54 33 Op 1 . + CDS 51616 - 51846 197 ## COG0583 Transcriptional regulator 55 33 Op 2 8/0.032 + CDS 51902 - 52561 826 ## COG0120 Ribose 5-phosphate isomerase + Prom 52712 - 52771 4.4 56 34 Tu 1 . + CDS 52817 - 54049 1384 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Term 54071 - 54107 7.1 - Term 54351 - 54399 -0.9 57 35 Tu 1 . - CDS 54439 - 54987 341 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 58 36 Op 1 . - CDS 55287 - 55616 344 ## COG3027 Uncharacterized protein conserved in bacteria 59 36 Op 2 . - CDS 55565 - 55753 62 ## UTI89_C3296 hypothetical protein - Prom 55780 - 55839 2.9 + Prom 55696 - 55755 1.5 60 37 Op 1 5/0.194 + CDS 55784 - 56362 619 ## COG3079 Uncharacterized protein conserved in bacteria 61 37 Op 2 8/0.032 + CDS 56388 - 57716 1320 ## COG0006 Xaa-Pro aminopeptidase 62 38 Op 1 8/0.032 + CDS 57832 - 58983 1005 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 63 38 Op 2 5/0.194 + CDS 59006 - 60208 1260 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Term 60252 - 60287 4.1 + Prom 60442 - 60501 6.5 64 39 Op 1 18/0.000 + CDS 60656 - 61750 1265 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) 65 39 Op 2 12/0.000 + CDS 61774 - 62163 504 ## COG0509 Glycine cleavage system H protein (lipoate-binding) + Term 62193 - 62236 2.5 + Prom 62200 - 62259 1.9 66 39 Op 3 . + CDS 62281 - 65154 3324 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain + Term 65180 - 65205 -0.5 - Term 65266 - 65316 2.6 67 40 Tu 1 . - CDS 65320 - 66759 1765 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 66783 - 66842 3.3 + Prom 66505 - 66564 3.2 68 41 Op 1 . + CDS 66798 - 67109 416 ## COG3097 Uncharacterized protein conserved in bacteria + Prom 67121 - 67180 4.5 69 41 Op 2 . + CDS 67273 - 67932 742 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 67966 - 68017 11.4 - Term 67951 - 68005 7.4 70 42 Tu 1 . - CDS 68009 - 68989 1051 ## COG0354 Predicted aminomethyltransferase related to GcvT - Prom 69022 - 69081 4.2 + Prom 68995 - 69054 3.8 71 43 Op 1 . + CDS 69232 - 69498 278 ## COG2938 Uncharacterized conserved protein 72 43 Op 2 . + CDS 69479 - 69886 298 ## EcSMS35_3029 hypothetical protein - Term 69877 - 69919 1.2 73 44 Tu 1 . - CDS 69926 - 70447 698 ## COG0716 Flavodoxins - Prom 70479 - 70538 3.4 + Prom 70476 - 70535 4.9 74 45 Op 1 8/0.032 + CDS 70559 - 71455 840 ## COG4974 Site-specific recombinase XerD 75 45 Op 2 7/0.065 + CDS 71480 - 72190 722 ## COG1651 Protein-disulfide isomerase 76 45 Op 3 5/0.194 + CDS 72196 - 73929 1836 ## COG0608 Single-stranded DNA-specific exonuclease + Term 73953 - 73987 2.6 + Prom 73994 - 74053 1.7 77 46 Op 1 8/0.032 + CDS 74237 - 75118 944 ## COG1186 Protein chain release factor B 78 46 Op 2 . + CDS 75128 - 76645 2050 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 76666 - 76696 2.1 79 47 Tu 1 . - CDS 76688 - 77236 445 ## COG1443 Isopentenyldiphosphate isomerase - Prom 77268 - 77327 4.1 - Term 77309 - 77337 -0.3 80 48 Op 1 . - CDS 77359 - 77484 91 ## 81 48 Op 2 . - CDS 77486 - 78934 375 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Prom 79232 - 79291 6.0 82 49 Op 1 3/0.484 + CDS 79355 - 81289 1097 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 83 49 Op 2 . + CDS 81289 - 81777 250 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 + Term 81784 - 81837 2.6 - Term 81774 - 81816 7.0 84 50 Op 1 2/0.710 - CDS 81830 - 83197 1194 ## COG2252 Permeases 85 50 Op 2 4/0.371 - CDS 83233 - 84549 1373 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 86 50 Op 3 2/0.710 - CDS 84567 - 85967 292 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Term 86095 - 86122 1.5 87 51 Op 1 12/0.000 - CDS 86132 - 89002 2793 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 88 51 Op 2 2/0.710 - CDS 88999 - 89778 797 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 89 51 Op 3 1/0.823 - CDS 89829 - 91157 1355 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 90 51 Op 4 3/0.484 - CDS 91160 - 94258 2763 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 94361 - 94420 9.4 91 52 Tu 1 . - CDS 94580 - 95158 206 ## COG2068 Uncharacterized MobA-related protein - Prom 95261 - 95320 5.6 92 53 Op 1 . + CDS 95430 - 96032 171 ## ECS88_3155 hypothetical protein 93 53 Op 2 . + CDS 96080 - 97705 1322 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family + Term 97717 - 97777 28.4 - Term 97703 - 97765 11.7 94 54 Op 1 . - CDS 97772 - 98704 1275 ## COG0549 Carbamate kinase 95 54 Op 2 4/0.371 - CDS 98752 - 100137 1105 ## COG0044 Dihydroorotase and related cyclic amidohydrolases - Term 100140 - 100172 5.0 96 55 Op 1 4/0.371 - CDS 100190 - 101401 1468 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 97 55 Op 2 2/0.710 - CDS 101459 - 102655 1113 ## COG1171 Threonine dehydratase - Term 102673 - 102706 5.2 98 55 Op 3 . - CDS 102713 - 103900 1472 ## COG0078 Ornithine carbamoyltransferase 99 56 Tu 1 . + CDS 104379 - 106157 918 ## COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains + Term 106196 - 106263 30.2 100 57 Op 1 15/0.000 - CDS 106251 - 106706 288 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 101 57 Op 2 12/0.000 - CDS 106703 - 107581 550 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 102 57 Op 3 . - CDS 107592 - 109889 1815 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs - Prom 110013 - 110072 3.6 103 58 Tu 1 . + CDS 110303 - 111058 362 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 111155 - 111221 30.0 + TRNA 111137 - 111210 78.8 # Gly CCC 0 0 - Term 111469 - 111509 9.1 104 59 Tu 1 . - CDS 111544 - 112773 570 ## COG0814 Amino acid permeases - Prom 112808 - 112867 4.4 + Prom 112922 - 112981 5.1 105 60 Tu 1 . + CDS 113028 - 114209 1074 ## COG0183 Acetyl-CoA acetyltransferase + Term 114431 - 114474 2.2 + Prom 114335 - 114394 6.7 106 61 Op 1 9/0.032 + CDS 114496 - 115332 671 ## COG3717 5-keto 4-deoxyuronate isomerase 107 61 Op 2 9/0.032 + CDS 115362 - 116135 763 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 116136 - 116185 4.4 108 62 Tu 1 . + CDS 116509 - 117867 1330 ## COG0477 Permeases of the major facilitator superfamily + Prom 117874 - 117933 14.3 109 63 Tu 1 . + CDS 118007 - 118699 646 ## COG1794 Aspartate racemase + Term 118916 - 118964 -1.0 110 64 Tu 1 . - CDS 118686 - 119621 813 ## COG0583 Transcriptional regulator - Prom 119705 - 119764 6.7 + Prom 119651 - 119710 9.1 111 65 Tu 1 . + CDS 119743 - 121005 1280 ## COG0019 Diaminopimelate decarboxylase 112 66 Tu 1 . - CDS 121012 - 122043 906 ## COG1609 Transcriptional regulators + Prom 122534 - 122593 3.2 113 67 Op 1 5/0.194 + CDS 122629 - 124788 2021 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 114 67 Op 2 . + CDS 124781 - 125974 1388 ## COG0477 Permeases of the major facilitator superfamily + Term 126007 - 126036 1.1 - Term 125995 - 126024 1.1 115 68 Tu 1 . - CDS 126031 - 127071 1157 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 127097 - 127156 7.3 - Term 127137 - 127174 5.1 116 69 Tu 1 . - CDS 127179 - 127397 238 ## G2583_3488 hypothetical protein - Prom 127430 - 127489 3.5 117 70 Op 1 5/0.194 - CDS 127535 - 128248 822 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 118 70 Op 2 . - CDS 128317 - 129006 741 ## COG3066 DNA mismatch repair protein - Prom 129052 - 129111 5.0 + Prom 129053 - 129112 3.6 119 71 Tu 1 . + CDS 129192 - 129338 86 ## ECO103_3390 hypothetical protein + Prom 129392 - 129451 6.3 120 72 Op 1 7/0.065 + CDS 129691 - 130221 251 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 121 72 Op 2 5/0.194 + CDS 130234 - 132480 2052 ## COG3605 Signal transduction protein containing GAF and PtsI domains 122 73 Op 1 11/0.000 + CDS 132631 - 133506 1010 ## COG0682 Prolipoprotein diacylglyceryltransferase 123 73 Op 2 4/0.371 + CDS 133534 - 134307 915 ## COG0207 Thymidylate synthase + Term 134326 - 134363 5.6 + Prom 134323 - 134382 2.1 124 74 Op 1 12/0.000 + CDS 134492 - 134962 267 ## COG2165 Type II secretory pathway, pseudopilin PulG 125 74 Op 2 . + CDS 134953 - 135516 615 ## COG4795 Type II secretory pathway, component PulJ 126 74 Op 3 . + CDS 135513 - 135920 258 ## ECUMN_3151 hypothetical protein 127 74 Op 4 5/0.194 + CDS 135905 - 136228 85 ## COG4967 Tfp pilus assembly protein PilV 128 74 Op 5 5/0.194 + CDS 136241 - 139609 3173 ## COG1330 Exonuclease V gamma subunit + Prom 139665 - 139724 3.1 129 75 Op 1 5/0.194 + CDS 139785 - 142673 2649 ## COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like 130 75 Op 2 13/0.000 + CDS 142666 - 146208 3139 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 131 75 Op 3 . + CDS 146208 - 148034 1418 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Term 148041 - 148099 5.1 132 76 Tu 1 . - CDS 148096 - 149427 1254 ## COG0548 Acetylglutamate kinase - Prom 149457 - 149516 4.2 + Prom 149450 - 149509 7.1 133 77 Op 1 2/0.710 + CDS 149569 - 149757 145 ## COG0860 N-acetylmuramoyl-L-alanine amidase 134 77 Op 2 . + CDS 149809 - 150954 1044 ## COG0860 N-acetylmuramoyl-L-alanine amidase + Term 150960 - 151010 9.3 + Prom 151056 - 151115 5.8 135 78 Op 1 7/0.065 + CDS 151212 - 152036 469 ## COG3711 Transcriptional antiterminator 136 78 Op 2 3/0.484 + CDS 152068 - 153648 1399 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 137 78 Op 3 . + CDS 153648 - 154823 173 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 138 78 Op 4 . + CDS 154826 - 155422 460 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation + Term 155452 - 155485 2.0 139 78 Op 5 . + CDS 155494 - 156441 388 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Term 156475 - 156511 2.8 - Term 156671 - 156703 -0.9 140 79 Op 1 1/0.823 - CDS 156743 - 158119 895 ## COG3515 Uncharacterized protein conserved in bacteria 141 79 Op 2 1/0.823 - CDS 158119 - 158547 434 ## COG3518 Uncharacterized protein conserved in bacteria 142 79 Op 3 1/0.823 - CDS 158551 - 159087 651 ## COG3521 Uncharacterized protein conserved in bacteria 143 79 Op 4 9/0.032 - CDS 159068 - 160147 821 ## COG3520 Uncharacterized protein conserved in bacteria 144 79 Op 5 . - CDS 160111 - 161871 1442 ## COG3519 Uncharacterized protein conserved in bacteria - Prom 161921 - 161980 8.4 - Term 162008 - 162049 -0.9 145 80 Tu 1 . - CDS 162241 - 162684 75 ## APECO1_3699 hypothetical protein 146 81 Tu 1 . - CDS 162941 - 163495 265 ## ECS88_3100 hypothetical protein - Term 163510 - 163539 1.4 147 82 Op 1 . - CDS 163570 - 165147 491 ## COG5529 Pyocin large subunit 148 82 Op 2 5/0.194 - CDS 165153 - 166763 1708 ## COG3515 Uncharacterized protein conserved in bacteria 149 82 Op 3 . - CDS 166756 - 170109 2896 ## COG3523 Uncharacterized protein conserved in bacteria 150 82 Op 4 . - CDS 170119 - 171171 355 ## ECS88_3096 hypothetical protein 151 82 Op 5 . - CDS 171257 - 171517 154 ## COG4104 Uncharacterized conserved protein - Prom 171546 - 171605 5.7 152 83 Op 1 . - CDS 171981 - 172274 182 ## ECS88_3094 hypothetical protein 153 83 Op 2 . - CDS 172243 - 172833 302 ## ECS88_3093 hypothetical protein - Prom 172986 - 173045 7.2 154 84 Tu 1 . - CDS 173051 - 173431 101 ## UTI89_C3199 hypothetical protein - Prom 173575 - 173634 5.7 155 85 Op 1 . - CDS 173644 - 174810 508 ## ECS88_3091 hypothetical protein 156 85 Op 2 3/0.484 - CDS 174830 - 177310 1734 ## COG3501 Uncharacterized protein conserved in bacteria 157 85 Op 3 . - CDS 177322 - 178431 607 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 178489 - 178548 80.4 158 86 Tu 1 . - CDS 178578 - 180026 716 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Term 180177 - 180210 5.4 159 87 Op 1 1/0.823 - CDS 180218 - 180709 749 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 160 87 Op 2 1/0.823 - CDS 180767 - 182419 1195 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 161 87 Op 3 8/0.032 - CDS 182432 - 183097 550 ## COG3455 Uncharacterized protein conserved in bacteria 162 87 Op 4 1/0.823 - CDS 183094 - 184431 1018 ## COG3522 Uncharacterized protein conserved in bacteria 163 87 Op 5 6/0.097 - CDS 184449 - 185987 1509 ## COG3517 Uncharacterized protein conserved in bacteria 164 87 Op 6 . - CDS 186046 - 186546 495 ## COG3516 Uncharacterized protein conserved in bacteria - Prom 186584 - 186643 6.0 - TRNA 187182 - 187258 86.1 # Met CAT 0 0 - TRNA 187292 - 187368 86.1 # Met CAT 0 0 + Prom 187392 - 187451 4.1 165 88 Op 1 8/0.032 + CDS 187577 - 188674 1193 ## COG2821 Membrane-bound lytic murein transglycosylase + Term 188711 - 188744 4.1 166 88 Op 2 . + CDS 188751 - 189557 875 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 + Term 189563 - 189611 11.2 - Term 189551 - 189598 7.2 167 89 Op 1 7/0.065 - CDS 189608 - 190051 474 ## COG2166 SufE protein probably involved in Fe-S center assembly 168 89 Op 2 . - CDS 190051 - 191256 1049 ## COG0520 Selenocysteine lyase - Prom 191384 - 191443 5.2 + Prom 191369 - 191428 4.3 169 90 Tu 1 . + CDS 191448 - 191675 375 ## ECO111_3534 hypothetical protein + Prom 191895 - 191954 6.5 170 91 Op 1 6/0.097 + CDS 192026 - 192943 701 ## COG0583 Transcriptional regulator 171 91 Op 2 5/0.194 + CDS 192962 - 193357 498 ## COG2363 Uncharacterized small membrane protein 172 91 Op 3 . + CDS 193350 - 194450 1132 ## COG2933 Predicted SAM-dependent methyltransferase + Term 194453 - 194498 7.6 - Term 194440 - 194487 2.1 173 92 Tu 1 4/0.371 - CDS 194494 - 195225 524 ## COG1349 Transcriptional regulators of sugar metabolism - Term 195238 - 195269 3.5 174 93 Op 1 5/0.194 - CDS 195283 - 195705 413 ## COG4154 Fucose dissimilation pathway protein FucU 175 93 Op 2 4/0.371 - CDS 195707 - 197125 1020 ## COG1070 Sugar (pentulose and hexulose) kinases - Term 197132 - 197167 5.4 176 94 Op 1 3/0.484 - CDS 197234 - 199009 1854 ## COG2407 L-fucose isomerase and related proteins 177 94 Op 2 . - CDS 199042 - 200358 843 ## COG0738 Fucose permease - Prom 200474 - 200533 6.7 + Prom 200770 - 200829 3.8 178 95 Op 1 5/0.194 + CDS 200905 - 201552 679 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 179 95 Op 2 . + CDS 201580 - 202728 1195 ## COG1454 Alcohol dehydrogenase, class IV + Term 202910 - 202947 1.0 - Term 202734 - 202780 5.7 180 96 Tu 1 . - CDS 202833 - 203588 490 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) - Prom 203609 - 203668 2.7 181 97 Op 1 10/0.016 - CDS 203700 - 205067 1388 ## COG1760 L-serine deaminase - Term 205085 - 205127 7.9 182 97 Op 2 4/0.371 - CDS 205134 - 206423 1468 ## COG0814 Amino acid permeases - Term 206934 - 206969 4.0 183 98 Tu 1 6/0.097 - CDS 206980 - 208344 1301 ## COG1611 Predicted Rossmann fold nucleotide-binding protein - Prom 208380 - 208439 1.6 184 99 Tu 1 . - CDS 208456 - 209304 539 ## COG0780 Enzyme related to GTP cyclohydrolase I - Prom 209396 - 209455 3.6 + Prom 209279 - 209338 3.5 185 100 Tu 1 . + CDS 209372 - 209917 476 ## ECB_02638 SecY interacting protein Syd + Prom 210372 - 210431 80.4 186 101 Op 1 7/0.065 + CDS 210494 - 210823 348 ## COG3098 Uncharacterized protein conserved in bacteria 187 101 Op 2 5/0.194 + CDS 210823 - 211605 192 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family 188 101 Op 3 4/0.371 + CDS 211623 - 212072 560 ## COG0716 Flavodoxins + Term 212134 - 212185 9.5 + Prom 212312 - 212371 5.7 189 102 Op 1 7/0.065 + CDS 212506 - 213858 1533 ## COG0477 Permeases of the major facilitator superfamily 190 102 Op 2 5/0.194 + CDS 213860 - 215200 1474 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 191 102 Op 3 . + CDS 215221 - 216561 1671 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily + Term 216585 - 216646 25.8 - Term 216566 - 216632 19.7 192 103 Tu 1 . - CDS 216830 - 219586 2563 ## COG0642 Signal transduction histidine kinase - Prom 219764 - 219823 4.2 + Prom 219374 - 219433 1.6 193 104 Op 1 8/0.032 + CDS 219643 - 220944 893 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 194 104 Op 2 3/0.484 + CDS 220992 - 223226 2297 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases + Term 223239 - 223272 1.1 195 105 Op 1 8/0.032 + CDS 223304 - 223552 273 ## COG2336 Growth regulator 196 105 Op 2 3/0.484 + CDS 223552 - 223887 269 ## COG2337 Growth inhibitor 197 105 Op 3 5/0.194 + CDS 223959 - 224750 1061 ## COG1694 Predicted pyrophosphatase + Term 224764 - 224817 1.1 + Prom 224870 - 224929 5.3 198 106 Op 1 8/0.032 + CDS 224978 - 226615 1656 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 226634 - 226671 9.1 199 106 Op 2 . + CDS 226703 - 228001 1605 ## COG0148 Enolase + Term 228162 - 228212 -0.0 - Term 228015 - 228043 1.0 200 107 Tu 1 . - CDS 228084 - 228950 418 ## COG1512 Beta-propeller domains of methanol dehydrogenase type - Prom 229183 - 229242 2.4 201 108 Op 1 4/0.371 - CDS 229347 - 230138 305 ## COG1512 Beta-propeller domains of methanol dehydrogenase type 202 108 Op 2 8/0.032 - CDS 230153 - 231046 294 ## COG1512 Beta-propeller domains of methanol dehydrogenase type 203 108 Op 3 . - CDS 231060 - 231668 519 ## COG1704 Uncharacterized conserved protein - Prom 231694 - 231753 4.4 + Prom 231759 - 231818 5.5 204 109 Tu 1 . + CDS 231841 - 232512 214 ## PROTEIN SUPPORTED gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 + Term 232531 - 232583 11.1 205 110 Op 1 6/0.097 - CDS 232986 - 234464 1403 ## COG1070 Sugar (pentulose and hexulose) kinases 206 110 Op 2 . - CDS 234491 - 235618 1126 ## COG0477 Permeases of the major facilitator superfamily - Prom 235647 - 235706 4.3 + Prom 236026 - 236085 7.7 207 111 Op 1 8/0.032 + CDS 236114 - 236899 177 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 208 111 Op 2 5/0.194 + CDS 236969 - 238423 1588 ## COG0277 FAD/FMN-containing dehydrogenases + Term 238431 - 238473 8.0 209 112 Op 1 3/0.484 + CDS 238517 - 239854 985 ## COG0477 Permeases of the major facilitator superfamily 210 112 Op 2 29/0.000 + CDS 239832 - 240611 575 ## COG2086 Electron transfer flavoprotein, beta subunit 211 112 Op 3 . + CDS 240608 - 241468 708 ## COG2025 Electron transfer flavoprotein, alpha subunit + Term 241679 - 241711 0.3 212 113 Op 1 2/0.710 - CDS 241616 - 242191 476 ## COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 213 113 Op 2 12/0.000 - CDS 242208 - 242468 132 ## COG2440 Ferredoxin-like protein 214 113 Op 3 1/0.823 - CDS 242459 - 243730 677 ## COG0644 Dehydrogenases (flavoproteins) 215 113 Op 4 . - CDS 243808 - 244170 434 ## COG0720 6-pyruvoyl-tetrahydropterin synthase - Prom 244319 - 244378 3.4 + Prom 244267 - 244326 6.5 216 114 Op 1 11/0.000 + CDS 244489 - 246288 1814 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) 217 114 Op 2 11/0.000 + CDS 246288 - 248000 1936 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) 218 114 Op 3 . + CDS 248074 - 248808 913 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes + Term 248829 - 248866 5.3 + Prom 248813 - 248872 3.8 219 115 Tu 1 . + CDS 249073 - 249225 162 ## G2583_3410 small toxic membrane polypeptide + Term 249227 - 249268 3.0 220 116 Tu 1 . - CDS 249350 - 250387 557 ## COG2234 Predicted aminopeptidases - Prom 250421 - 250480 3.9 + Prom 250402 - 250461 4.3 221 117 Op 1 18/0.000 + CDS 250639 - 251547 1076 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 222 117 Op 2 7/0.065 + CDS 251549 - 252976 1645 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 223 117 Op 3 . + CDS 252976 - 253581 660 ## COG0529 Adenylylsulfate kinase and related kinases 224 117 Op 4 . + CDS 253631 - 253954 407 ## ECS88_3020 hypothetical protein + Prom 253962 - 254021 3.6 225 118 Op 1 11/0.000 + CDS 254147 - 254458 191 ## COG2919 Septum formation initiator 226 118 Op 2 19/0.000 + CDS 254477 - 255187 317 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 227 118 Op 3 8/0.032 + CDS 255187 - 255666 780 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 228 118 Op 4 8/0.032 + CDS 255663 - 256712 1071 ## COG0585 Uncharacterized conserved protein 229 118 Op 5 13/0.000 + CDS 256693 - 257454 674 ## COG0496 Predicted acid phosphatase 230 118 Op 6 11/0.000 + CDS 257448 - 258074 508 ## COG2518 Protein-L-isoaspartate carboxylmethyltransferase + Prom 258125 - 258184 2.1 231 118 Op 7 8/0.032 + CDS 258214 - 259353 649 ## COG0739 Membrane proteins related to metalloendopeptidases 232 118 Op 8 . + CDS 259416 - 260408 1100 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 260423 - 260466 9.2 233 119 Tu 1 . - CDS 260586 - 261137 538 ## COG0655 Multimeric flavodoxin WrbA - Prom 261189 - 261248 4.0 + Prom 261113 - 261172 5.1 234 120 Tu 1 . + CDS 261362 - 262405 615 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 262453 - 262497 8.4 - Term 262441 - 262485 7.6 235 121 Op 1 1/0.823 - CDS 262548 - 263912 1183 ## COG2610 H+/gluconate symporter and related permeases 236 121 Op 2 4/0.371 - CDS 264001 - 264777 703 ## COG3622 Hydroxypyruvate isomerase 237 121 Op 3 6/0.097 - CDS 264782 - 265420 407 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 238 121 Op 4 5/0.194 - CDS 265417 - 266679 1073 ## COG3395 Uncharacterized protein conserved in bacteria 239 121 Op 5 . - CDS 266676 - 267584 975 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases - Prom 267636 - 267695 5.2 + Prom 267570 - 267629 5.8 240 122 Tu 1 . + CDS 267780 - 268547 618 ## COG1349 Transcriptional regulators of sugar metabolism + Term 268569 - 268611 4.5 241 123 Tu 1 . - CDS 268598 - 269254 412 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - Prom 269276 - 269335 8.0 242 124 Tu 1 . - CDS 269360 - 271921 3091 ## COG0249 Mismatch repair ATPase (MutS family) + Prom 272113 - 272172 5.7 243 125 Tu 1 . + CDS 272207 - 272551 289 ## ECS88_2998 hypothetical protein + Term 272649 - 272686 -0.8 - Term 272539 - 272581 10.1 244 126 Op 1 . - CDS 272590 - 273018 490 ## COG2005 N-terminal domain of molybdenum-binding protein 245 126 Op 2 3/0.484 - CDS 273063 - 275126 2134 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains - Term 275147 - 275175 3.0 246 127 Op 1 4/0.371 - CDS 275215 - 276225 1161 ## COG0309 Hydrogenase maturation factor 247 127 Op 2 13/0.000 - CDS 276222 - 277343 944 ## COG0409 Hydrogenase maturation factor 248 127 Op 3 8/0.032 - CDS 277343 - 277615 321 ## COG0298 Hydrogenase maturation factor 249 127 Op 4 11/0.000 - CDS 277606 - 278478 897 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 250 127 Op 5 . - CDS 278482 - 278832 215 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) - Prom 278863 - 278922 4.0 + Prom 278922 - 278981 3.5 251 128 Tu 1 . + CDS 279044 - 279505 446 ## ECS88_2990 formate hydrogenlyase regulatory protein HycA + Term 279554 - 279604 10.1 252 129 Op 1 4/0.371 + CDS 279630 - 280241 337 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 253 129 Op 2 10/0.016 + CDS 280238 - 282064 2165 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 254 129 Op 3 7/0.065 + CDS 282067 - 282990 1285 ## COG0650 Formate hydrogenlyase subunit 4 255 129 Op 4 5/0.194 + CDS 283008 - 284717 2270 ## COG3261 Ni,Fe-hydrogenase III large subunit 256 129 Op 5 6/0.097 + CDS 284727 - 285269 489 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 257 129 Op 6 . + CDS 285269 - 286036 816 ## COG3260 Ni,Fe-hydrogenase III small subunit 258 129 Op 7 . + CDS 286033 - 286443 504 ## ECS88_2983 protein required for maturation of hydrogenase 3 259 129 Op 8 . + CDS 286469 - 286906 575 ## COG0680 Ni,Fe-hydrogenase maturation factor 260 129 Op 9 . + CDS 286949 - 287116 61 ## EC55989_2982 conserved hypothetical protein; putative exported protein 261 129 Op 10 . + CDS 287142 - 287561 393 ## COG5499 Predicted transcription regulator containing HTH domain - Term 287576 - 287613 3.3 262 130 Op 1 8/0.032 - CDS 287659 - 289083 1477 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 263 130 Op 2 . - CDS 289092 - 290549 1642 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 290741 - 290800 20.7 + Prom 290681 - 290740 24.6 264 131 Op 1 . + CDS 290828 - 291838 919 ## COG1609 Transcriptional regulators + Term 291853 - 291892 3.0 + Prom 291890 - 291949 5.0 265 131 Op 2 . + CDS 291987 - 292514 388 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 266 132 Op 1 . + CDS 292667 - 294325 1336 ## COG0068 Hydrogenase maturation factor 267 132 Op 2 . + CDS 294367 - 294948 349 ## COG0068 Hydrogenase maturation factor + Term 295023 - 295067 4.1 - Term 295023 - 295085 -0.2 268 133 Op 1 5/0.194 - CDS 295172 - 296305 979 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 269 133 Op 2 . - CDS 296302 - 297741 1354 ## COG0426 Uncharacterized flavoproteins - Prom 297800 - 297859 4.6 + Prom 297766 - 297825 7.9 270 134 Op 1 . + CDS 297928 - 299259 1131 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains 271 134 Op 2 . + CDS 299304 - 299474 186 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains 272 135 Op 1 . - CDS 299471 - 300436 1204 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 273 135 Op 2 4/0.371 - CDS 300429 - 301202 767 ## COG1349 Transcriptional regulators of sugar metabolism 274 135 Op 3 5/0.194 - CDS 301269 - 301628 263 ## COG4578 Glucitol operon activator - Prom 301665 - 301724 3.8 275 136 Op 1 5/0.194 - CDS 301734 - 302513 818 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 276 136 Op 2 6/0.097 - CDS 302517 - 302888 300 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 277 136 Op 3 6/0.097 - CDS 302899 - 303858 1017 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 278 136 Op 4 . - CDS 303855 - 304418 778 ## COG3730 Phosphotransferase system sorbitol-specific component IIC - Prom 304517 - 304576 6.4 + Prom 304460 - 304519 4.9 279 137 Tu 1 . + CDS 304675 - 305760 1045 ## COG2951 Membrane-bound lytic murein transglycosylase B + Prom 305778 - 305837 2.6 280 138 Op 1 12/0.000 + CDS 305905 - 306402 301 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 281 138 Op 2 14/0.000 + CDS 306482 - 307543 1477 ## COG0468 RecA/RadA recombinase + Term 307559 - 307598 4.4 282 138 Op 3 . + CDS 307612 - 308112 616 ## COG2137 Uncharacterized protein conserved in bacteria + Term 308169 - 308222 12.0 283 139 Tu 1 . - CDS 308153 - 308335 139 ## ECSP_3645 hypothetical protein - Prom 308491 - 308550 3.4 284 140 Tu 1 . + CDS 308240 - 310870 2994 ## COG0013 Alanyl-tRNA synthetase + Prom 310918 - 310977 4.1 285 141 Tu 1 . + CDS 311105 - 311290 204 ## PROTEIN SUPPORTED gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 + TRNA 311606 - 311698 72.5 # Ser GCT 0 0 + TRNA 311702 - 311778 87.2 # Arg ACG 0 0 Predicted protein(s) >gi|296918703|gb|GG772997.1| GENE 1 2 - 431 311 143 aa, chain - ## HITS:1 COG:ECs3843 KEGG:ns NR:ns ## COG: ECs3843 COG0582 # Protein_GI_number: 15833097 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 143 1 143 421 282 98.0 1e-76 MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKV LKSLETHVFPFIGNRDITTLSTP >gi|296918703|gb|GG772997.1| GENE 2 810 - 1517 524 235 aa, chain - ## HITS:1 COG:ECs3842 KEGG:ns NR:ns ## COG: ECs3842 COG1811 # Protein_GI_number: 15833096 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 327 97.0 1e-89 MVIGPFINASAVLLGGVFGALLSQRLPERIRVSMTSIFGLASLGIGILLVVKCANLPAMV LATLLGALIGEICLLEKGVNTVVAKAHNLFHHSRKKPAHESFIQNFVAIIVLFCASGTGI FGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVISIPLLIIQLTLAWAAALILP LTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLPALLLAMPLSAAWTAWFA >gi|296918703|gb|GG772997.1| GENE 3 1916 - 4051 1865 711 aa, chain + ## HITS:1 COG:ECs3841 KEGG:ns NR:ns ## COG: ECs3841 COG1982 # Protein_GI_number: 15833095 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 711 21 731 731 1487 99.0 0 MKSMNIAASSELVSRLSTHRCVVALGDTDFTDVAAVVITAADSRSGILALLKRTGFHLPV FLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLLPPFYDTLTQYVEMGNSTFAC PGHQHGAFFKKHPAGRHFYDFFGENIFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVFH ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNP FGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPFRLAIIQLGTYDGTVYNARQVIDTVG HLCDYILFDSAWVGYEQFIPMMADSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHK KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVELG IESRKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFDPGAKWHGFEGYAADQ YFVDPCKLLLTTQGIDAETGEYSDFGVPATILAHYLRENGIVPEKCDLNSILFLLTPAES HEKLAQLVAMLAQFEQHIEDDSPLAEVLPSVYNKYPVRYRDYTLRQLCQEMHDLYVSFDV KDLQKAMFRQQSFPSVVMNPQDAHSAYIRGEVELVRIRDAEGRIAAEGALPYPPGVLCVV PGEVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDANGMKRLYGYVLK >gi|296918703|gb|GG772997.1| GENE 4 4100 - 5356 1534 418 aa, chain - ## HITS:1 COG:ECs3840 KEGG:ns NR:ns ## COG: ECs3840 COG0477 # Protein_GI_number: 15833094 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 418 17 434 434 724 99.0 0 MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPALLGI VADKWLSAKWVYAICHTIGAITLFMAAEVTTPEAMFLVILINSFAYMPTLGLINTISYYR LQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHMQLYIGAALSAILVLFTLTLP HIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSMLLGAELQITNMFGNTFLHSFDK DPMFASSFIVQHASIIMSISQISETLFILTIPFFLSRYGIKNVMMISIVAWILRFALFAY GDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVEKEVSPAIRASAQGMFLMMTNGFGCIL GGIVSGKVVEMYTQNGITDWQTVWLIFAGYSVVLAFAFMAMFKYKHVRVPTGTQTVSH >gi|296918703|gb|GG772997.1| GENE 5 5558 - 5722 63 54 aa, chain - ## HITS:1 COG:ECs3839 KEGG:ns NR:ns ## COG: ECs3839 COG0741 # Protein_GI_number: 15833093 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli O157:H7 # 1 54 307 360 360 103 98.0 7e-23 MLRVFSNDKIQAANIINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR >gi|296918703|gb|GG772997.1| GENE 6 5780 - 6712 822 310 aa, chain - ## HITS:1 COG:mltC KEGG:ns NR:ns ## COG: mltC COG0741 # Protein_GI_number: 16130864 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli K12 # 1 306 1 306 360 590 100.0 1e-168 MMKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQFAHNIENIWGFKEVVI AGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLY SDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLKNRLKSRSNGLRIIYSVTIN MVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQH TAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAY NGGAGSGVAS >gi|296918703|gb|GG772997.1| GENE 7 6774 - 7049 339 91 aa, chain - ## HITS:1 COG:STM3111 KEGG:ns NR:ns ## COG: STM3111 COG2924 # Protein_GI_number: 16766412 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Salmonella typhimurium LT2 # 1 91 1 91 91 161 94.0 3e-40 MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQHKQTMLINEKKLNMMNA EHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK >gi|296918703|gb|GG772997.1| GENE 8 7077 - 8129 1085 350 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 6 343 11 366 378 422 59 1e-117 MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFP TVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRS TAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERF NQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWSLYPGKKPKQTLPERTGYFLLLQH EDEVLLAQRPSSGLWGGLYCFPQFADEESLRQWLAQRQISADNLTQLTAFRHTFSHFHLD IVPMWLPVSSFTGCMDEDNALWYNLAQPPSVGLAAPVERLLQQLRTGAPV >gi|296918703|gb|GG772997.1| GENE 9 8290 - 9009 747 239 aa, chain + ## HITS:1 COG:yggH KEGG:ns NR:ns ## COG: yggH COG0220 # Protein_GI_number: 16130861 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Escherichia coli K12 # 1 239 1 239 239 489 99.0 1e-138 MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPVMGVEFSEDMLDFPALF GREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLSSAHEEGLSNLRVMCH DAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGIFHMATD WEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVK >gi|296918703|gb|GG772997.1| GENE 10 9009 - 9335 449 108 aa, chain + ## HITS:1 COG:yggL KEGG:ns NR:ns ## COG: yggL COG3171 # Protein_GI_number: 16130860 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 108 11 118 118 200 99.0 7e-52 MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINEVIEPNKLAFDGS GYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLEEVRTSELFDVWWD >gi|296918703|gb|GG772997.1| GENE 11 9522 - 10238 923 238 aa, chain + ## HITS:1 COG:no KEGG:APECO1_3563 NR:ns ## KEGG: APECO1_3563 # Name: yggN # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 238 2 239 239 429 100.0 1e-119 MRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGENGNLVITPDGNVMYNGK QYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIALDKIIVQEMGESSKMRSRLT KLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLVNQAMGGILQDSINEMGAKAVL KSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGKDVCSRVVTLEDSRKALVGNLK >gi|296918703|gb|GG772997.1| GENE 12 10414 - 11460 1306 348 aa, chain + ## HITS:1 COG:ECs3833 KEGG:ns NR:ns ## COG: ECs3833 COG0252 # Protein_GI_number: 15833087 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 612 99.0 1e-175 MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATKSNYTAGKVGVENLVNA VPQLKDIANVKGEQVVNIGSQDMNDDVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYF LDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGR DVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVY NYANASDLPAKALVDAGYDGIVSAGVGNGNLYKTVFDTLATAAKNGTAVVRSSRVPTGAT TQDAEVDDAKYGFVASGMLNPQKARVLLQLALTQTKDPQQIQQIFNQY >gi|296918703|gb|GG772997.1| GENE 13 11577 - 12584 763 335 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3238 NR:ns ## KEGG: ECS88_3238 # Name: yggM # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 335 1 335 335 605 100.0 1e-172 MKKQWIVGTALFMLMTGNVWADGEPPTENILKDQFKKQYHGILKLDVITLKNLDAKGNQA TWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAMLTSKGTPASGWSVNFYSF QAAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALNNQNNSIPALKKDVKALDKQM VAAQKAADAYWGKDANGKQMTREDAFKKIHQQRDDFNKQNDSEAFAVKYDKEVYQPAIAA CHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLSRKLQDDWITLEKGQYPLTMKVSEI NSKKVAILMKIDDINQANERWKKDTEQLRRNGVIK >gi|296918703|gb|GG772997.1| GENE 14 12669 - 13805 1194 378 aa, chain - ## HITS:1 COG:yggW KEGG:ns NR:ns ## COG: yggW COG0635 # Protein_GI_number: 16130856 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli K12 # 1 378 1 378 378 778 97.0 0 MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQ TIFIGGGTPSLLSGPAMQTLLDGVRARLPLTADAEITMEANPGTVEADRFVDYQRAGVNR ISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDL RQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQYETSA YSKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQGRYLESQR DVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRPQLEEAIAQGYLTECADYWQI TEHGKLFLNSLLELFLAE >gi|296918703|gb|GG772997.1| GENE 15 13798 - 14391 1007 197 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|26249375|ref|NP_755415.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Escherichia coli CFT073] # 1 197 1 197 197 392 100 1e-108 MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKV TGLPAIADDSGLAVDALGGAPGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHC VLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSAI SHRGQALKLLLDALRNG >gi|296918703|gb|GG772997.1| GENE 16 14399 - 14689 298 96 aa, chain - ## HITS:1 COG:ECs3829 KEGG:ns NR:ns ## COG: ECs3829 COG1872 # Protein_GI_number: 15833083 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 96 5 100 100 174 98.0 5e-44 MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFR VAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN >gi|296918703|gb|GG772997.1| GENE 17 14686 - 15252 757 188 aa, chain - ## HITS:1 COG:ECs3828 KEGG:ns NR:ns ## COG: ECs3828 COG0762 # Protein_GI_number: 15833082 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 272 100.0 2e-73 MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGP IDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWVS QGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYVINMGVAEVLQATGNML LPGLWMAL >gi|296918703|gb|GG772997.1| GENE 18 15270 - 15974 624 234 aa, chain - ## HITS:1 COG:ECs3826 KEGG:ns NR:ns ## COG: ECs3826 COG0325 # Protein_GI_number: 15833081 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 453 99.0 1e-127 MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQ EGVDKIRHFQELSVTGLEWHFIGPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAEL PPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRLRGLMAIPAPESEYVRQFEVA RQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK >gi|296918703|gb|GG772997.1| GENE 19 15992 - 16972 807 326 aa, chain + ## HITS:1 COG:yggR KEGG:ns NR:ns ## COG: yggR COG2805 # Protein_GI_number: 16130851 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Escherichia coli K12 # 1 326 16 341 341 611 98.0 1e-175 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDAPDVEELLREWLDDDQRAIL LENGQLDFAVSLAENQRLRGSAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSEN GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYTSQRCLIQQREIGLHCM TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH VIQTGQQVGMITFQQSYQQRVKEGRL >gi|296918703|gb|GG772997.1| GENE 20 17146 - 17562 531 138 aa, chain - ## HITS:1 COG:yqgF KEGG:ns NR:ns ## COG: yqgF COG0816 # Protein_GI_number: 16130850 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Escherichia coli K12 # 1 138 1 138 138 276 99.0 1e-74 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG LPLNMDGTEQPLTARARKFANRIHGRFGIEVKLHDERLSTVEARSGLFEQGGYRALNKGK VDSASAVIILESYFEQGY >gi|296918703|gb|GG772997.1| GENE 21 17562 - 18125 621 187 aa, chain - ## HITS:1 COG:ECs3824 KEGG:ns NR:ns ## COG: ECs3824 COG1678 # Protein_GI_number: 15833078 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 187 25 211 211 374 100.0 1e-104 MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPE PRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQ PSDVLVALGYASWEKGQLEQEILDNAWLTAPADLNILFKTPIADRWREAAKLIGVDILTM PGVAGHA >gi|296918703|gb|GG772997.1| GENE 22 18234 - 19184 352 316 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme [Shewanella piezotolerans WP3] # 7 310 6 319 345 140 32 8e-32 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMADLYLINGEARARTRTLSVE QNYDKWYEFTGEQDLPLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIVNKPQSLR DCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILKPLDGMGGASIFRVKEGDPNL GVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEPVPYCLARIPQGGETRGNLAAGG RGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIGDRLTEINVTSPTCIREIEAEFPVS ITGMLMDAIEARLQQQ >gi|296918703|gb|GG772997.1| GENE 23 19197 - 19928 581 243 aa, chain - ## HITS:1 COG:ECs3822 KEGG:ns NR:ns ## COG: ECs3822 COG1385 # Protein_GI_number: 15833076 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 243 10 252 252 486 100.0 1e-137 MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKK SVEVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD SERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLHPRASNSIN TLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG DLG >gi|296918703|gb|GG772997.1| GENE 24 20016 - 20726 513 236 aa, chain - ## HITS:1 COG:ECs3821 KEGG:ns NR:ns ## COG: ECs3821 COG2356 # Protein_GI_number: 15833075 # Func_class: L Replication, recombination and repair # Function: Endonuclease I # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 445 98.0 1e-125 MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPGTFYCGCKINWQGKKGV VDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGGRKNCAKDPVYRKMESDMH NLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEKVAEPPARARGAIARTYFYMR DQYNLTLSRQQTQLFNAWDKMYPVTDWECERDERIAKVQGNHNPYVQRACQARKAS >gi|296918703|gb|GG772997.1| GENE 25 20821 - 21318 392 165 aa, chain - ## HITS:1 COG:ECs3820 KEGG:ns NR:ns ## COG: ECs3820 COG3091 # Protein_GI_number: 15833074 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 165 1 165 165 313 99.0 9e-86 MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRGTSAGTAWLESYEIRLN PVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWMMESVLGVPARRTHQFELQ SVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGEQLVAK >gi|296918703|gb|GG772997.1| GENE 26 21440 - 22834 1730 464 aa, chain - ## HITS:1 COG:galP KEGG:ns NR:ns ## COG: galP COG0477 # Protein_GI_number: 16130844 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 464 1 464 464 851 99.0 0 MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSS MMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVG VASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGAWRWMLGVIIIP AILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESLQVKQSGWA LFKENSNFRRAVFLGVLLQIMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTN VLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQYFAIAMLLMFIV GFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFWV YAALNVLFILLTLWLVPETKHVSLEHIERNLMKGRKLREIGAHD >gi|296918703|gb|GG772997.1| GENE 27 23271 - 24425 1366 384 aa, chain - ## HITS:1 COG:ECs3818 KEGG:ns NR:ns ## COG: ECs3818 COG0192 # Protein_GI_number: 15833072 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Escherichia coli O157:H7 # 1 384 1 384 384 781 100.0 0 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTS AWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQ GLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVG IDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDC GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVS YAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGH FGREHFPWEKTDKAQLLRDAAGLK >gi|296918703|gb|GG772997.1| GENE 28 25220 - 27196 2269 658 aa, chain + ## HITS:1 COG:ECs3814 KEGG:ns NR:ns ## COG: ECs3814 COG1166 # Protein_GI_number: 15833068 # Func_class: E Amino acid transport and metabolism # Function: Arginine decarboxylase (spermidine biosynthesis) # Organism: Escherichia coli O157:H7 # 1 658 1 658 658 1363 100.0 0 MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWWGNNYYDVNELGHISVC PDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDY FLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYI RLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARLASQGSGKWQSSGGEK SKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKL GVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEENGLPHPTVITE SGRAVTAHHTVLVSNIIGVERNEYTVPTAPAEDAPRALQSMWETWQEMHEPGTRRSLREW LHDSQMDLHDIHIGYSSGTFSLQERAWAEQLYLSMCHEVQKQLDPQNRAHRPIIDELQER MADKMYVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDG DGIATTMPMPEYDPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELS DEGDTVADMLQYVQLDPKTLLTQFRDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE >gi|296918703|gb|GG772997.1| GENE 29 27357 - 28088 617 243 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3220 NR:ns ## KEGG: ECS88_3220 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 243 1 243 243 467 100.0 1e-130 MKKWKVRSALVALIVLLAGCSSNAQYNSSASGNVGTAWGGDVHSTVHGVSAERAWRDPAE MIVISYSTNVPSGYDRVYSIRINELEYAIRDGNFKSLPITRVYDSSNNEPRYIVHARVGM NYQLYVRNYSRNTNYEIVATVDGLDVLNGKQGSLNNNGYIVNAGDSLAIKGFRKDKHTEA AFQFANVADSYAANSAQGDVRNTGVIGFAAFELQGPAKNALPPCSGQAFPADNNGYAPPP CRK >gi|296918703|gb|GG772997.1| GENE 30 28224 - 29144 1216 306 aa, chain + ## HITS:1 COG:ECs3812 KEGG:ns NR:ns ## COG: ECs3812 COG0010 # Protein_GI_number: 15833066 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 616 99.0 1e-176 MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIR QVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRML SFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPKEGLIDPNH SVQIGIRTEFDKDNGFTVLDACQVNDRSVDDIIAQVKQIVGDMPVYLTFDIDCLDPAFAP GTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQ AAKKGE >gi|296918703|gb|GG772997.1| GENE 31 29348 - 30106 794 252 aa, chain - ## HITS:1 COG:ECs3811 KEGG:ns NR:ns ## COG: ECs3811 COG0501 # Protein_GI_number: 15833065 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 252 43 294 294 452 95.0 1e-127 MKIRALLVAMSVATVLTGCQNMDSSGLLSSGAEAFQAYSLSDAQVKKLSDQACQEMDSKA TIAPANSEYARRLTTISRALGDNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMT DNEVEAVLGHEMGHVALGHVKKGMQVALGTNAIRVAAASAGGIVGSLSQSQLGDLGEKLV NSQFTQRQESEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQ HIRDRMSADGVK >gi|296918703|gb|GG772997.1| GENE 32 30384 - 32375 2408 663 aa, chain + ## HITS:1 COG:ECs3810 KEGG:ns NR:ns ## COG: ECs3810 COG0021 # Protein_GI_number: 15833064 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Escherichia coli O157:H7 # 1 663 1 663 663 1324 99.0 0 MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRF VLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGI ANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIA FYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAIEEARAVTDKPSL LMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAG QAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKA SQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANG ISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQIA SLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGG YVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESV LPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAEQLFEEFGFTVDNVVAKAK ALL >gi|296918703|gb|GG772997.1| GENE 33 32683 - 33591 985 302 aa, chain - ## HITS:1 COG:YPO1342 KEGG:ns NR:ns ## COG: YPO1342 COG0330 # Protein_GI_number: 16121622 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Yersinia pestis # 18 302 18 303 308 287 51.0 2e-77 MKAPVSLTSFRPQKSLAIAIGVLAVVVLPFLSYYTVNEGERGILLRYGKIVKVAEPGLGF KIPFMESVEKISTRNQAVVYQGLQAYSRDQQPAQMTVSVSFHIKPSEAGAVYTTYNTIEA LKDRLIVRQLPTQLENVFGQYTAISAVQDRTKLVQDLQNAMRKAVVGPVVIDGVQIENTD FSDAYEKSIEDRMKAEVAIATRKQNLETEKIQAQIAVTQAQAEADSKLAAAKAEAETIRV RGAAEAETIRLKSAAEAEAIRLRGEALRENPGLVALTTAERWDGKLPDTMIPGSTVPFIS TK >gi|296918703|gb|GG772997.1| GENE 34 33968 - 34411 403 147 aa, chain + ## HITS:1 COG:ECs3809 KEGG:ns NR:ns ## COG: ECs3809 COG1762 # Protein_GI_number: 15833063 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 232 93.0 2e-61 MRLIDYFPELSISVIHSTKDWQEAINFSMASLLAKNYISENYIQAIKDSTISNGPYYILA PGVAMPHARPECGALKTGMSLTLLKQGVYFPGNDEPIKLLIGLSAADADSHIAAIQALSE LLCEEEILEQLLTASSEKQLAGIISRG >gi|296918703|gb|GG772997.1| GENE 35 34439 - 35827 1626 462 aa, chain + ## HITS:1 COG:ECs3808 KEGG:ns NR:ns ## COG: ECs3808 COG2213 # Protein_GI_number: 15833062 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Escherichia coli O157:H7 # 1 462 1 462 462 854 99.0 0 MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWLPNEHFAKIVGPMITYL LPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSMIMGPLGGLVIKYIDKSLE KRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANTFVKECIEALVHAGYLPLLSV INEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMVASNPGPGLGLLLAFTLFGKGMS KRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIAGGMSGTWMFNLLDGGLVAGPSPGS IFAYLALTPKGSFLATIAGVTVGTLVSFAITSLILKMEKTVETESDDEFAQSANAVKAMK QEGAFSLSRVKRIAFVCDAGMGSSAMGATTFRKRLEKAGLAIEVKHYAIENVPADADIVV THASLEGRVKRVTDKPLILINNYIGDPKLDTLFNQLTAEHKH >gi|296918703|gb|GG772997.1| GENE 36 35842 - 37119 1399 425 aa, chain + ## HITS:1 COG:ECs3807 KEGG:ns NR:ns ## COG: ECs3807 COG1063 # Protein_GI_number: 15833061 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 425 1 425 425 848 97.0 0 MKTKVAAIYGKRDVRLREFELPEITDNELLVNVISDSVCLSTWKAALLGSEHKRVPDDLE NHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPGGYSAGYSYEYFGGNATYMI IPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHANYHTTQYVYEHRMGVKPGGNIAL LACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQMLLPVELAASKGIELVYMNTK GVSDPVQTLRALTDDAGFDDVFVYAAVPSVVEMADELLAEDGCLNFFAGPTDKNFKVPFN FYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQLQPSFMVTHIGGLDAVPETVLNLPDIP GGKKLIYNGVTMPLTAIADFAEKGKTDPLFKELARLVEKTHGIWNEQAEKYLLAQFGVDI GEAAQ >gi|296918703|gb|GG772997.1| GENE 37 37116 - 37304 199 62 aa, chain + ## HITS:1 COG:yggF KEGG:ns NR:ns ## COG: yggF COG1494 # Protein_GI_number: 16130831 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Escherichia coli K12 # 1 58 1 58 321 118 98.0 2e-27 MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDSLAVTAMRQALNDVAFRGRVVIGEGERY PL >gi|296918703|gb|GG772997.1| GENE 38 37453 - 37962 333 169 aa, chain + ## HITS:1 COG:yggD KEGG:ns NR:ns ## COG: yggD COG3722 # Protein_GI_number: 16130830 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 169 1 169 169 290 96.0 1e-78 MATLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVDNDEEIVEYAVKPLLAQ SGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQDETPGFADDMAWDFISNVN SIIRNASLYDALKAMKFADFAVWSEARFSGMVKTALMLAVTTTLKELTP >gi|296918703|gb|GG772997.1| GENE 39 37959 - 38672 448 237 aa, chain + ## HITS:1 COG:ECs3804 KEGG:ns NR:ns ## COG: ECs3804 COG1072 # Protein_GI_number: 15833058 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 457 92.0 1e-128 MKIELTVNGLKVQAQYSDDEIENVHKPLLRMLAALQTVNPQRRTVVFLCAPPGTGKSTLT TFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDVHQLRPFKGAPETFNVAKLAENLCRVVE GDCTWPQYDRQKHDPVEDVLHVTAPLVIVEGNWLLLDDEKWCQLAQFCDFSIFIKAPASA LRERLVGRKLAGGLSLADAEAFYDRTDGPNVRRVLEESLPANLTLMMTATGEYRLMD >gi|296918703|gb|GG772997.1| GENE 40 38644 - 39321 186 225 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] # 1 209 1 205 205 76 26 1e-12 MLTLNQISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKSTLLRVMAGLLTPTAGTV MLQQQAMKNLKNRQRAAKIGVLFQEAENQLFHSTVADEIAFGLILQKCPADEITQHTNAA LQCCQLADTASAHPLDLHSAQRRMVAVACLEALSPPLLLLDEPSRDFDENWLSVFESWLE KCRQRGTSVVAISHDAAFTRRHFSRVVRLEDGVIRNVNPSDDIHP >gi|296918703|gb|GG772997.1| GENE 41 39315 - 39992 374 225 aa, chain - ## HITS:1 COG:ECs3802 KEGG:ns NR:ns ## COG: ECs3802 COG1122 # Protein_GI_number: 15833056 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 437 96.0 1e-123 MVTLEQFRYCPTHSTHPPFCYDFHYVKPGMVAIFGDNGSGKSTLAQLMAGWYPDFLPGEI TGTGTLLGTPIGRLPLNEQSATIQLVQQSPYLQLSGCTFSVEEEVAFGPENLCLAEKEIM ARIDAALALTECQPLRHRHPATLSGGETQRVVIACAIAMQPKLLILDEAFSRLTPQAREM LLQRLQHWALERGSLIILFERHHTPFLNHCQQAWQLQNGALQPLC >gi|296918703|gb|GG772997.1| GENE 42 39980 - 40687 359 235 aa, chain - ## HITS:1 COG:ECs3801 KEGG:ns NR:ns ## COG: ECs3801 COG0619 # Protein_GI_number: 15833055 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 397 96.0 1e-110 MHPFTSLTLWALAACTTLILPTQTILPVYSAATFFCLIALKATRRRAKYVVWLMFSLGAG LWLVHGGWLTEWLSGTPRSPERWAHAITLWLRILAIVSTSQLWMQYVPVQRFIRALFASR LPPGVAYLFAGPLLVVEQLKRQLAIIHEAQRARGVPLDEGWYQRLRAMPALIIPLTHNAL NDLAVRGAALDMRAFRINNRRTTLWAPADSTLQRVARYAMILLMLAEFGAWIWLR >gi|296918703|gb|GG772997.1| GENE 43 40688 - 41266 687 192 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_3274 NR:ns ## KEGG: ECUMN_3274 # Name: not_defined # Def: putative ABC-type transport system # Organism: E.coli_UMN026 # Pathway: not_defined # 1 192 34 225 225 275 100.0 8e-73 MARRHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSIGTLISAVLLGPVIGMLTGLL TNLLWGLLTDPIAAAFAPVAMVIGLVAGWLARAGWFRTLPKVVVSGVIITLAVTVVAVPL RTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANLVDKILTAVIVWLLLRQLPIR TTRHFPAMAAVR >gi|296918703|gb|GG772997.1| GENE 44 41289 - 41720 380 143 aa, chain - ## HITS:1 COG:ECs3799 KEGG:ns NR:ns ## COG: ECs3799 COG1661 # Protein_GI_number: 15833053 # Func_class: R General function prediction only # Function: Predicted DNA-binding protein with PD1-like DNA-binding motif # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 258 93.0 2e-69 MMTLPYPYSSSARFYALRLLPGQEVLSQLRAFAQQQQLHAAWIAGCTGSLTDVALRYAGQ ENTALLSGKFEVIALNGTLEQSGEHLHLCVSDPHGTMLGGHMMPGCTVRTTLELVIGCLE ELAFSRQLCALSGYDELHISPVK >gi|296918703|gb|GG772997.1| GENE 45 42092 - 43111 826 339 aa, chain + ## HITS:1 COG:ECs3798 KEGG:ns NR:ns ## COG: ECs3798 COG0057 # Protein_GI_number: 15833052 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 339 1 339 339 675 99.0 0 MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWE VRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKV LFSHPGSNDLDTTVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTT IHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTI NVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYAELPLVSVDFNHDPHSAIVDGT QTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMATVAFR >gi|296918703|gb|GG772997.1| GENE 46 43161 - 44324 1405 387 aa, chain + ## HITS:1 COG:pgk KEGG:ns NR:ns ## COG: pgk COG0126 # Protein_GI_number: 16130827 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Escherichia coli K12 # 1 387 1 387 387 717 99.0 0 MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAKVMVTSHL GRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVAEGELVVLENVRFNKGEKK DDETLSKKYAVLCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKE PARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFIAAQGHDVGKSLYEADLVD EAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVNDVKADEQILDIGDASAQELAEILKN AKTILWNGPVGVFEFPNFRKGTEIVANAIADSEAFSIAGGGDTLAAIDLFGIADKISYIS TGGGAFLEFVEGKVLPAVAMLEERAKK >gi|296918703|gb|GG772997.1| GENE 47 44539 - 45618 1164 359 aa, chain + ## HITS:1 COG:Zfba KEGG:ns NR:ns ## COG: Zfba COG0191 # Protein_GI_number: 15803459 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 EDL933 # 1 359 26 384 384 739 99.0 0 MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQ FSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWI DGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTG GEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPT ILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGV LNYYKENEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL >gi|296918703|gb|GG772997.1| GENE 48 45809 - 46669 980 286 aa, chain + ## HITS:1 COG:ECs3795 KEGG:ns NR:ns ## COG: ECs3795 COG0668 # Protein_GI_number: 15833049 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 495 99.0 1e-140 MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRK IDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAA GVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSR EPARRNEFIIGVAYDSDIDQVKQILTDIIQSEDRILKDREMTVRLNELGASSINFVVRVW SNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVKEDKAA >gi|296918703|gb|GG772997.1| GENE 49 46808 - 47440 628 210 aa, chain + ## HITS:1 COG:ECs3794 KEGG:ns NR:ns ## COG: ECs3794 COG1279 # Protein_GI_number: 15833048 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Escherichia coli O157:H7 # 1 210 1 211 211 360 99.0 1e-99 MFSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCAISDLVLICAGIFGGSA LLMQSPWLLALTWGGVAFLLWYGFGAFKTAMSSNIELASAEVLKQGRWKIIATMLAVTWL NPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWFFGLAILAAWLAPRLRTAKSQR IINLVVGCVMWFIALQLARDGIAHAQALFS >gi|296918703|gb|GG772997.1| GENE 50 47533 - 48273 724 246 aa, chain + ## HITS:1 COG:ECs3793 KEGG:ns NR:ns ## COG: ECs3793 COG2968 # Protein_GI_number: 15833047 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 408 98.0 1e-114 MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDIATLAIEVNVAAKDAAT AKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDGKSILKGYRAVRTVEVTLR QLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKAAIDNAIHQAQELANGFHRKL GPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQAAIQFDDQVDVIFQLEPVDQPPA KTPAAH >gi|296918703|gb|GG772997.1| GENE 51 48431 - 49327 720 298 aa, chain + ## HITS:1 COG:ygfI KEGG:ns NR:ns ## COG: ygfI COG0583 # Protein_GI_number: 16130822 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 298 6 303 303 584 97.0 1e-167 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASRFGKSIAALEEQIGYTLFTRKDNNISL NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSRDIVIGIDNTYPTIIFDQLISLGDKYEG VTAQPVEFSANGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE ERQEQELLQELPWLQMRFQNWANFEAMIDANMRPCGINPTIIYRPYSFMAKISDVERGHF LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTNH >gi|296918703|gb|GG772997.1| GENE 52 49324 - 50379 917 351 aa, chain - ## HITS:1 COG:sbm_1 KEGG:ns NR:ns ## COG: sbm_1 COG1884 # Protein_GI_number: 16130818 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Escherichia coli K12 # 1 309 1 343 585 598 86.0 1e-171 MSNVQEWQQLANKELSRREKTVDSLVQQTAEGIAIKPLYTEADLDNLEVTGTLPGLPPYV RGPRATMYTAQPWTIRQYAGFSTAKESNAFYRRNLAAHRGYDSDNPRVAGDVGKAGVAID TGEDMKVLFDQIPLDKMSVSMTMNGAVLPVLAFYIVAAEEQGVTSDKLTGTIQNDILKEY LCRNTYIYPPKPSMRIIADIIAWCSGNMPRFNTISISSYHMGEAGANCVQQVAFTLADRI EYIKAAISAGLKIDGFVPRLSFFFGIGMDLFMNAAMLRAARYLWSEAVSGFGAQDPYNNV IRTTIDHCAHPMCRDYLHRYLENASGGHIHHDLSHVFDLHRNLIATGSMLG >gi|296918703|gb|GG772997.1| GENE 53 50582 - 51475 787 297 aa, chain - ## HITS:1 COG:ECs3786 KEGG:ns NR:ns ## COG: ECs3786 COG0583 # Protein_GI_number: 15833040 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 577 100.0 1e-165 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD >gi|296918703|gb|GG772997.1| GENE 54 51616 - 51846 197 76 aa, chain + ## HITS:1 COG:yqfE KEGG:ns NR:ns ## COG: yqfE COG0583 # Protein_GI_number: 16130816 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 76 1 76 76 142 100.0 1e-34 MHFAQRVRALVVLNGVALLPQFACKQGLANGELVRLFAPWSGIPRPLYALFAGRKGMPAI ARYFMDELTTRLANGV >gi|296918703|gb|GG772997.1| GENE 55 51902 - 52561 826 219 aa, chain + ## HITS:1 COG:ECs3785 KEGG:ns NR:ns ## COG: ECs3785 COG0120 # Protein_GI_number: 15833039 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 397 100.0 1e-111 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKL KSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADAS KQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGVVTDNGNVILDVHGMEILDPI AMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK >gi|296918703|gb|GG772997.1| GENE 56 52817 - 54049 1384 410 aa, chain + ## HITS:1 COG:ECs3784 KEGG:ns NR:ns ## COG: ECs3784 COG0111 # Protein_GI_number: 15833038 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 802 100.0 0 MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLR SRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGEL LLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFY DIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASR GTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEA QENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPLHGGRRLMHIHENRPGVLTALNKIFAE QGVNIAAQYLQTSAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRARLLY >gi|296918703|gb|GG772997.1| GENE 57 54439 - 54987 341 182 aa, chain - ## HITS:1 COG:ECs3782 KEGG:ns NR:ns ## COG: ECs3782 COG0212 # Protein_GI_number: 15833036 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 353 98.0 7e-98 MIRQRRRTLTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAG KRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAF DEYGQRLGMGGGFYDRTLQNWQHYKMQPVGYAHDCQLVEKLPVEKWDIPLPAVVTPSKVW EW >gi|296918703|gb|GG772997.1| GENE 58 55287 - 55616 344 109 aa, chain - ## HITS:1 COG:ECs3781 KEGG:ns NR:ns ## COG: ECs3781 COG3027 # Protein_GI_number: 15833035 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 163 100.0 6e-41 MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALN ISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITEKTNQNFE >gi|296918703|gb|GG772997.1| GENE 59 55565 - 55753 62 62 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C3296 NR:ns ## KEGG: UTI89_C3296 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 62 1 62 62 114 100.0 1e-24 MICYHFGPWWTRKGLVSSHQGSYSVAPSQTMGLKTKAAQSISRKVACLHNPSISKFLAVH CV >gi|296918703|gb|GG772997.1| GENE 60 55784 - 56362 619 192 aa, chain + ## HITS:1 COG:ECs3780 KEGG:ns NR:ns ## COG: ECs3780 COG3079 # Protein_GI_number: 15833034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 192 3 194 194 359 100.0 1e-99 MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDSSWLPLLHDLTNEGMAF GHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRADALAGWVNHFLLGLGVTQ PKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFTHPQ PTAPEVQKPTLH >gi|296918703|gb|GG772997.1| GENE 61 56388 - 57716 1320 442 aa, chain + ## HITS:1 COG:ECs3779 KEGG:ns NR:ns ## COG: ECs3779 COG0006 # Protein_GI_number: 15833033 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli O157:H7 # 1 430 1 430 441 874 98.0 0 MSDISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPE AVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQ LLNGLDVVYHAQGEHAYADEIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPE EIAVLRRAGEITALAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENG CILHYTENECELRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLET SLRLYRPGTSIQEVTGEVVRIMVSGLVKLGILKGEVDELIAQNAHRPFFMHGLSHWLGLD VHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENL TASVVKKPEEPPPPAFVLKTIL >gi|296918703|gb|GG772997.1| GENE 62 57832 - 58983 1005 383 aa, chain + ## HITS:1 COG:ECs3778 KEGG:ns NR:ns ## COG: ECs3778 COG0654 # Protein_GI_number: 15833032 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 383 10 392 392 734 98.0 0 MAGATLALAISRLSHGALPVHLIEATAPESHAHPGFDGRAIALAAGTCQQLARIGVWQSL ADCATAITTVHVSDRGHAGFVTLAAEDYQLAALGQVVELHNVGQRLFALLRKAPGVTLHC PDRVANVARTQSHVEVTLESGETLTGRVLVAADGTHSALATVCGVDWQQEPYEQLAVIAN VATSVAHEGRAFERFTQHGPLAMLPMSDGRCSLVWCHPLERREEVLSWSDEKFCRELQSA FGWRLGKITHAGKRSAYPLALTRAAKPITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSL AETLTQAQERGEDMGDYGVLCRYQQRRQSDREATIGVTDSLVHLFANRWTPLVVGRNIGL MTMELFTPARDVLAQRTLGWVAR >gi|296918703|gb|GG772997.1| GENE 63 59006 - 60208 1260 400 aa, chain + ## HITS:1 COG:ECs3777 KEGG:ns NR:ns ## COG: ECs3777 COG0654 # Protein_GI_number: 15833031 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 796 98.0 0 MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADAPPQLRVSAINAASEKL LTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNK ARQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLVIGADGANSWLRNKADIPLTF WDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPYLCSIVWSLSPEEALRMQQA SEDEFNRALNIAFDNRLGLCKVESERLVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQ GVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGA NPAKKLLRDIGLKLADTLPGVKPQLIRQAMGLNDLPEWLR >gi|296918703|gb|GG772997.1| GENE 64 60656 - 61750 1265 364 aa, chain + ## HITS:1 COG:gcvT KEGG:ns NR:ns ## COG: gcvT COG0404 # Protein_GI_number: 16130807 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Escherichia coli K12 # 1 364 1 364 364 742 99.0 0 MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGS RTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREK DLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKPFFGVQAG DLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAGMNLYSQEM DETISPLAANMGWTIAWEPADRDFIGREALEAQREHGTEKLVGLVMTEKGVLRNELPVRF TDAQGNQHEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNREMPVKVTKPVFVRNG KAVA >gi|296918703|gb|GG772997.1| GENE 65 61774 - 62163 504 129 aa, chain + ## HITS:1 COG:ECs3775 KEGG:ns NR:ns ## COG: ECs3775 COG0509 # Protein_GI_number: 15833029 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Escherichia coli O157:H7 # 1 129 1 129 129 217 99.0 4e-57 MSNIPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAV AESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDAT AYEALLEDE >gi|296918703|gb|GG772997.1| GENE 66 62281 - 65154 3324 957 aa, chain + ## HITS:1 COG:ECs3774_2 KEGG:ns NR:ns ## COG: ECs3774_2 COG1003 # Protein_GI_number: 15833028 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Escherichia coli O157:H7 # 451 957 1 507 507 1026 99.0 0 MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQIVPKDIQLATPPQVGA PATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNMLENPGWYTAYTPYQPEVS QGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAMAKRVSKLKNANRFFVASDVH PQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQQVGTTGEIHDYTALISELKSRK IVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEYKRSMPGR IIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPVGLKRI ANRIHRLTDILAAGLQQKGLKLRHAHYFDTLCVEVVDKAGVLARAEAAEINLRSDILNAV GITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHDSRSIQAAMLRDDEILTHPVFN RYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPE QAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLI PASAHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVY EETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPG MGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKK ASQVAILNANYIASRLQDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDY GFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNA PHIQSELVAEWAHPYSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ >gi|296918703|gb|GG772997.1| GENE 67 65320 - 66759 1765 479 aa, chain - ## HITS:1 COG:bglA KEGG:ns NR:ns ## COG: bglA COG2723 # Protein_GI_number: 16130803 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 479 1 479 479 1001 98.0 0 MIVKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVVPGKY YPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMIDE LLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNE INNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAAHRINPEMKVGC MLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGD LDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRY ALCELYERYQKPLFIVENGFGAYDKVEDDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLM GYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGENL >gi|296918703|gb|GG772997.1| GENE 68 66798 - 67109 416 103 aa, chain + ## HITS:1 COG:ECs3772 KEGG:ns NR:ns ## COG: ECs3772 COG3097 # Protein_GI_number: 15833026 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 103 1 103 103 183 99.0 8e-47 MQPNDITFFQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRFEDDGYFCTIEVTATST VTLDTLTEKHAEQENMTLTELKKVIADIYPDQTQFYVIEFKCL >gi|296918703|gb|GG772997.1| GENE 69 67273 - 67932 742 219 aa, chain + ## HITS:1 COG:ECs3771 KEGG:ns NR:ns ## COG: ECs3771 COG1272 # Protein_GI_number: 15833025 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 357 100.0 1e-98 MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDLNASATAITSYSLYGGS MILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGLMIVIW SLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMAVKLAAGSVTLLAVGGVVYSL GVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQA >gi|296918703|gb|GG772997.1| GENE 70 68009 - 68989 1051 326 aa, chain - ## HITS:1 COG:ygfZ KEGG:ns NR:ns ## COG: ygfZ COG0354 # Protein_GI_number: 16130800 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Escherichia coli K12 # 1 326 1 326 326 619 98.0 1e-177 MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMTEDQHLLA AHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGV AGFQARAALANLFSELPSREKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGE AELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKF RGANKRALWLLKGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDM EPDSIFRVRDDANTLRIEPLPYSLEE >gi|296918703|gb|GG772997.1| GENE 71 69232 - 69498 278 88 aa, chain + ## HITS:1 COG:ECs3769 KEGG:ns NR:ns ## COG: ECs3769 COG2938 # Protein_GI_number: 15833023 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 171 100.0 4e-43 MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMN HGKPADAELEMMVRLIQTRNRERGPVAI >gi|296918703|gb|GG772997.1| GENE 72 69479 - 69886 298 135 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_3029 NR:ns ## KEGG: EcSMS35_3029 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 135 1 135 135 209 100.0 2e-53 MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRI NARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSDSGKRQHLWLAADSMDEAE WRDLRRILLQQETQR >gi|296918703|gb|GG772997.1| GENE 73 69926 - 70447 698 173 aa, chain - ## HITS:1 COG:ECs3767 KEGG:ns NR:ns ## COG: ECs3767 COG0716 # Protein_GI_number: 15833021 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 342 100.0 2e-94 MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLMEQYDVLILGIPTWDFGE IQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWP TEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSWCEQILNEMAEHYA >gi|296918703|gb|GG772997.1| GENE 74 70559 - 71455 840 298 aa, chain + ## HITS:1 COG:xerD KEGG:ns NR:ns ## COG: xerD COG4974 # Protein_GI_number: 16130796 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Escherichia coli K12 # 1 298 1 298 298 546 99.0 1e-155 MKQELARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLA ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER LLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA >gi|296918703|gb|GG772997.1| GENE 75 71480 - 72190 722 236 aa, chain + ## HITS:1 COG:ECs3765 KEGG:ns NR:ns ## COG: ECs3765 COG1651 # Protein_GI_number: 15833019 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 465 99.0 1e-131 MKKGFMLFTLLAAFSGFVQADDAAIQQTLAKMGIKSSDIQPAPVAGMKTVLTNSGVLYIT DDGKHIIQGPMYDVSGTAPVNVTNKMLLKQLNALEKEMIVYKAPQEKHVITVFTDITCGY CHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAP ASCDVDIADHYALGVQLGVSGTPAVVLSNGTLVPGYQPPKDMKEFLDEHQKMTSGK >gi|296918703|gb|GG772997.1| GENE 76 72196 - 73929 1836 577 aa, chain + ## HITS:1 COG:ECs3764 KEGG:ns NR:ns ## COG: ECs3764 COG0608 # Protein_GI_number: 15833018 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Escherichia coli O157:H7 # 1 577 1 577 577 1151 99.0 0 MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDPQKLAASDLGFALGPRLNAAGRLDDM SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQVEALTLCEKLERSRDTLPGGLAM YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP GMMLKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI >gi|296918703|gb|GG772997.1| GENE 77 74237 - 75118 944 293 aa, chain + ## HITS:1 COG:ECs3763 KEGG:ns NR:ns ## COG: ECs3763 COG1186 # Protein_GI_number: 15833017 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Escherichia coli O157:H7 # 1 293 73 365 365 542 100.0 1e-154 MKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDI QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED NKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL >gi|296918703|gb|GG772997.1| GENE 78 75128 - 76645 2050 505 aa, chain + ## HITS:1 COG:lysS KEGG:ns NR:ns ## COG: lysS COG1190 # Protein_GI_number: 16130792 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Escherichia coli K12 # 1 505 1 505 505 1004 100.0 0 MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPVK >gi|296918703|gb|GG772997.1| GENE 79 76688 - 77236 445 182 aa, chain - ## HITS:1 COG:idi KEGG:ns NR:ns ## COG: idi COG1443 # Protein_GI_number: 16130791 # Func_class: I Lipid transport and metabolism # Function: Isopentenyldiphosphate isomerase # Organism: Escherichia coli K12 # 1 182 1 182 182 365 97.0 1e-101 MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKGQLLVTRRALSKKAWPG VWTNSVCGHPQLGESNEEAVIRRCRYELGVEITPPESIYPDFRYRATDPNGIVENEVCPV FAARTTSALQINDDEVMDYQWCDLAAVLRGIDATPWAFSPWMVMQATNREARKRLSAFTQ LK >gi|296918703|gb|GG772997.1| GENE 80 77359 - 77484 91 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF >gi|296918703|gb|GG772997.1| GENE 81 77486 - 78934 375 482 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 29 440 15 416 447 149 27 2e-34 MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSK EAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLG IFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYG NPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFA IVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGV GTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCIASGIILILFGMVPKMAVLVASIPQF VLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVL QPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEH GE >gi|296918703|gb|GG772997.1| GENE 82 79355 - 81289 1097 644 aa, chain + ## HITS:1 COG:ECs3759_2 KEGG:ns NR:ns ## COG: ECs3759_2 COG0493 # Protein_GI_number: 15833013 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli O157:H7 # 158 644 1 487 487 990 98.0 0 MKGMQMNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHVVGKGQAANPVA CHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQKCDLC NQRSSGTQACIDVCPTQALRLMDDKGLQQIKVARQRKTAAGKASSDAQPSRSAALLPVNS RKGADKISASERKTHFGEIYCGLDPQQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRL VQEGKIIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTAL AMGWRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPP FKLDKTVLSQRREIFTAMGIDFHLNCEIGRDISFNELTAEYDAVFLGVGTYGMMRADLPH EDAPGVIQALPFLTAHTRQLMGLPESAEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNA ASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGE PGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHTMPWLQGSGIKLDKWGLIQTGDVGYLP TQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFDTKAS >gi|296918703|gb|GG772997.1| GENE 83 81289 - 81777 250 162 aa, chain + ## HITS:1 COG:ygfS KEGG:ns NR:ns ## COG: ygfS COG1142 # Protein_GI_number: 16130788 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli K12 # 1 162 2 163 163 263 98.0 1e-70 MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADIFLPRLKVQRLDSISAPVMCHQCEN APCVGACPVGALTMGEQVVQANSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLC EQREEGPACVESCPTQALQLLTERELRRVRQQRIVASSENPL >gi|296918703|gb|GG772997.1| GENE 84 81830 - 83197 1194 455 aa, chain - ## HITS:1 COG:ECs3757 KEGG:ns NR:ns ## COG: ECs3757 COG2252 # Protein_GI_number: 15833011 # Func_class: R General function prediction only # Function: Permeases # Organism: Escherichia coli O157:H7 # 1 455 1 455 455 709 99.0 0 MSGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAG FPPAAVFVATCLVAGFGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQQISVPVALGAV FLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLLLIAANGVGMVIKNPIEGLPV ALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPS LTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIIN GGKALTSDSVSSIFSGLVGAAPAAVYIESAAGTAAGGKTGLTATVVGVLFLMILFLSPLS FLIPGYATAPALMYVGLLMLSNVSKLDFNDFIDAMAGLVCAVFIVLTCNIVTGIMLGFVT LVVGRVFAREWQKLNIGTVIITAALVAFYAGGWAI >gi|296918703|gb|GG772997.1| GENE 85 83233 - 84549 1373 438 aa, chain - ## HITS:1 COG:ECs3756 KEGG:ns NR:ns ## COG: ECs3756 COG0402 # Protein_GI_number: 15833010 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 1 438 2 439 439 917 99.0 0 MSGEHTLKAVRGSFIDVTRTVDNPEEIASALRFIEDGLLLIKQGKVEWFGEWEDGKHQIP DTIRVRDYRGKLIVPGFIDTHIHYPQSEMVGAYGEQLLEWLNKHTFPTERRYEDLEYARE MSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASHINMRMIAGKVMMDRNAPDYLLDT AESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQMAMAQRLKEEYPDTWVHTHLCEN KDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPTS NLYLGSGLFNLKKAWQKKVKVGMGTDIGAGTTFNMLQTLNEAYKVLQLQGYRLSAYEAFY LATLGGAKSLGLDDLIGNFLPGKEADFVVMEPTATPLQQLRYDNSVSLVDKLFVMMTLGD DRSIYRTYVDGRLVYERN >gi|296918703|gb|GG772997.1| GENE 86 84567 - 85967 292 466 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 45 453 27 425 447 117 25 7e-25 MSDINHAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVTPALIVGAALQLSAETTAYL VSMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIALGSSMKSDGFHEELIMSS LLGVSFVGAFLVVGSSFILPYLRRVITPTVSGIVVLMIGLSLIKVGIIDFGGGFAAKSSG TFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVGYIASLCLGMVDFSSMRNLP LITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATAMVSRRPIQGEEYQSRLKGG VLADGLVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGRTIAVMLVILGLFPMIGGFF TTIPSAVLGGAMTLMFSMIAIAGIRIIITNGLKRRETLIVATSLGLGLGVSYDPEIFKIL PASIYVLVENPICAGGLTAILLNIILPGGYRQENVLPGITSAEEMD >gi|296918703|gb|GG772997.1| GENE 87 86132 - 89002 2793 956 aa, chain - ## HITS:1 COG:ECs3754_2 KEGG:ns NR:ns ## COG: ECs3754_2 COG1529 # Protein_GI_number: 15833008 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli O157:H7 # 160 956 1 797 797 1639 99.0 0 MIIHFTLNGAPQELTVNPGENVQKLLFNMGMHSVRNSDDGFGFAGSDAIIFNGNIVNASL LIAAQLEKADIRTAESLGKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIDAPT REEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQATIDIAPTFRDDLEVIGKHYPKTD AAKMVQAKPCYVEDRVTADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPD IYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEDIALEALKLIDVEYEVLKPV MSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAAS IHGHIGDMDKGFADADVIIERTYNSTQAQQCPTETHICFTRMDGDRLVIHASTQVPWHLR RQVARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVLFRYTREEEFIA NTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVD FQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKI LGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKPQNGDWHIGRGVAIIMQKSGIP DIDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHAL FDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPGVVRGKKGEVS FGEIAHKGETGTGFGSLVGTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCG TPVNPELALGQIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVL VPSDDKVGPFGAKSISEIGVNGAAPAIATAIHDACGIWLREWHFTPEKILTALEKI >gi|296918703|gb|GG772997.1| GENE 88 88999 - 89778 797 259 aa, chain - ## HITS:1 COG:ECs3753 KEGG:ns NR:ns ## COG: ECs3753 COG1319 # Protein_GI_number: 15833007 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 499 98.0 1e-141 MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWIDWD NGALRIGAMSRLQPLRDARFIPAALCEALGFVYSRHVRNQSTIGGEIAARQEESVLLPVL LALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAV AITDHDGMRIALDGVASKALRLHDVETQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT GVLVADLYADCQQAGEEAV >gi|296918703|gb|GG772997.1| GENE 89 89829 - 91157 1355 442 aa, chain - ## HITS:1 COG:Z4218 KEGG:ns NR:ns ## COG: Z4218 COG0402 # Protein_GI_number: 15803416 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 EDL933 # 1 442 23 464 464 897 98.0 0 MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIDDALTQRYPDASYKEMHGRIVMPGIVC SHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCT SVIDHHASPAYIDGSLSTLRNAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARQI DEAKKAATEPYLVEAHIGAHAPFTVPDAGLEMLREAVKSTGRGLHIHAAEDLYDVSYSHH WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDIALLNQRDAFLVHNARSNMNNHVGYNHH LSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALANGNELMSRNFGAKF GLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDC DSIYAQARKAAASMWRRMDALA >gi|296918703|gb|GG772997.1| GENE 90 91160 - 94258 2763 1032 aa, chain - ## HITS:1 COG:ygfK_2 KEGG:ns NR:ns ## COG: ygfK_2 COG0493 # Protein_GI_number: 16130780 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 451 1032 1 582 582 1223 98.0 0 MGDIMRPIPFEELLTRIFDEYQQQRSIFGIPEQQFYSPVKGKTVSVFGETCATPVGPAAG PHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAEDECFNTEWSTEFTLLKAWD EYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQPPMQQFIDNMMDASDHPKFA QYRDALNKLLQDEAFLARHGLQEKRESLQALPARIPTSMVQGVTLSTMHGCPPHEIEAIC RYMLEEKGLNTFVKLNPTLLGYARVREILDVCGFGYIGLKEESFDHDLKLTQALEMLERL MALAKEKSLGFGVKLTNTLGTINNKGALPGEEMYMSGRALFPLSINVAAVLSRAFDGKLP ISYSGGASQLTIRDIFDTGIRPITMATDLLKPGGYLRLSACMRELEGSDAWGLDHVDVER LNRLAADALTMEYTQKHWKPEERIEVAEDLPLTDCYVAPCVTACAIKQDIPEYIRLLGEH RYADALELIYQRNALPAITGHICDHQCQYNCTRLDYDSALNIRELKKVALEKGWDEYKQR WHKPAGSGSRHPVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIPQFRIPA ELIQHDIDFVADHGVKFEYGCSPDLTVEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVW KSLPFLREYNKGTALKLGKHVVVVGAGNTAMDCARAALRVPGVEKATVVYRRSLQEMPAW REEYEEALHDGVEFRFLNNPERFDADGTLTLRVMSLGEPDEKGRRRPVETNETVTLHVDS LITAIGEQQDTEALNAMGVPLDKNGWPDVDHNGETRLSDVFMIGDVQRGPSSIVAAVGTA RRATDAILSRENIRSHQNDKYWNNVNPAEIYQRKGDISVTLVNSDDRDAFVAQEAARCLE CNYVCSKCVDVCPNRANVSIAVPGFQNRFQTLHLDAYCNECGNCAQFCPWNGKPYKDKIT VFSLSQDFDNSSNPGFLVEDCRVRVRLNNQSWVLNIDSEGQFNNVPPELNDMCRIISHVH QHHHYLLGRVEV >gi|296918703|gb|GG772997.1| GENE 91 94580 - 95158 206 192 aa, chain - ## HITS:1 COG:ygfJ KEGG:ns NR:ns ## COG: ygfJ COG2068 # Protein_GI_number: 16130779 # Func_class: R General function prediction only # Function: Uncharacterized MobA-related protein # Organism: Escherichia coli K12 # 1 192 1 192 192 393 98.0 1e-109 MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHER YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG AILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGEHYSVEIENAEIILDIDTPD DFITAKKRYTEI >gi|296918703|gb|GG772997.1| GENE 92 95430 - 96032 171 200 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3155 NR:ns ## KEGG: ECS88_3155 # Name: yqeC # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 200 57 256 256 419 100.0 1e-116 MFMPTSHWPVVFCRDPAMLPHASFISPISFCFHCWKANQGKVQGFTPEAIDALVQRPECD VILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHILGAKVSTENVHRWSQFADITG LTPDAPLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHNV EAIWLGDIQEHPAIARRFVN >gi|296918703|gb|GG772997.1| GENE 93 96080 - 97705 1322 541 aa, chain + ## HITS:1 COG:yqeB KEGG:ns NR:ns ## COG: yqeB COG1975 # Protein_GI_number: 16130777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Escherichia coli K12 # 1 541 1 541 541 1043 99.0 0 MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSIVGTIGGGMVERKVIEE SLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGMRPRLVLIGAGHVNRAIAQ SAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAVEALDIRPDNFVLIATNNQDR EALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEEHIARLHAPVGYNIGAETPQEIA ISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGAGDIASGVALRLYHAGFKVIMLEVE KPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSAEAMKLTERGFIPVMVDPTCSLLDELK PLCVVDAILAKQNLGTRADMALVTIALGPGFTAGKDCHAVIETNRGHWLGQVIYSGCAQE NTGVPGNIMGHTTRRVIRAPAAGIMRSNVKLGDLVKEGDVIAWIGEHEIKAPLTGMVRGL LNDGLAVVGGFKIGDIDPRGETADFTSVSDKARAIGGGVLEALMMLMHQGVKATKEVLEV A >gi|296918703|gb|GG772997.1| GENE 94 97772 - 98704 1275 310 aa, chain - ## HITS:1 COG:yqeA KEGG:ns NR:ns ## COG: yqeA COG0549 # Protein_GI_number: 16130776 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 310 1 310 310 562 99.0 1e-160 MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIVTHGNGPQVGMINQAFE AAAKTEAHSPMLPMSVCVALSQGYIGYDLQNALREELLSRGINKPVATLVTQVEVDANDP AFLNPTKPIGSFFTEQEAELLTKQGYTLKEDAGRGYRRVVASPKPVDIIEKETVKALVDA GQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLAEMIDADMLIILTAVEKVAINFG KENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAAASFARSRAGREALITVLSKAKEGI EGKTGTVICQ >gi|296918703|gb|GG772997.1| GENE 95 98752 - 100137 1105 461 aa, chain - ## HITS:1 COG:ECs3746 KEGG:ns NR:ns ## COG: ECs3746 COG0044 # Protein_GI_number: 15833000 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli O157:H7 # 1 461 5 465 465 966 98.0 0 MRVLIKNGIVVNADGQAKQDLLIESGIVRQLGTDISPQLPCEEIDASGCYVFPGGVDVHT HFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVI DYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESGALTT VHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLYIVHL SNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWC GISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRISLE RFVELTSAMPARLFGLWPQKGILAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPWEGFT CQGAIVRTLSRGETIFCDGTFTGKAGRGRFLRRKPFVPPVL >gi|296918703|gb|GG772997.1| GENE 96 100190 - 101401 1468 403 aa, chain - ## HITS:1 COG:ECs3745 KEGG:ns NR:ns ## COG: ECs3745 COG0624 # Protein_GI_number: 15832999 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli O157:H7 # 1 403 1 403 403 848 100.0 0 MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEID PMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMA SMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQV YRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLT VSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRP SWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGI PVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE >gi|296918703|gb|GG772997.1| GENE 97 101459 - 102655 1113 398 aa, chain - ## HITS:1 COG:ECs3744 KEGG:ns NR:ns ## COG: ECs3744 COG1171 # Protein_GI_number: 15832998 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 398 1 398 398 823 99.0 0 MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYHPTPLCALDDLANLFGVK KILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTD GNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQ QHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGV LGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWE ILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLM EKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVAP >gi|296918703|gb|GG772997.1| GENE 98 102713 - 103900 1472 395 aa, chain - ## HITS:1 COG:ECs3743 KEGG:ns NR:ns ## COG: ECs3743 COG0078 # Protein_GI_number: 15832997 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 1 395 2 396 396 805 99.0 0 MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSG LGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGI RDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFG SLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAK NNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCL AQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEA SWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK >gi|296918703|gb|GG772997.1| GENE 99 104379 - 106157 918 592 aa, chain + ## HITS:1 COG:ygeV KEGG:ns NR:ns ## COG: ygeV COG3829 # Protein_GI_number: 16130771 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 1 592 1 592 592 1173 99.0 0 MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAGTGAYGKFLGRQLSGNS RLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTPVILQERCVGVISLIAVTH EQQEHISDNLREFSDYVRHISTIFVSKLLEDQGPGDNISKIFATMIDNMDQGVLVVDADN RVQFVNQTALKTLGVVQNNIIGKPVRFRPLTFESNFTHGHMQHIVSWDDKSELIIGQLHN IQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVG ESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELFGYVKGAFTGASANGKTGL IQAANTGTLFLDEIGDMPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQF IAEGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPGIAPDVVEI LRKHRWPGNLRELSNLMEYLVNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSL DDAGGTALEEMEKQMIREALSRHNSKKEVADELGIGIATLYRKIKKYELLNT >gi|296918703|gb|GG772997.1| GENE 100 106251 - 106706 288 151 aa, chain - ## HITS:1 COG:ygeU KEGG:ns NR:ns ## COG: ygeU COG2080 # Protein_GI_number: 16130770 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Escherichia coli K12 # 1 151 1 151 159 272 96.0 1e-73 MNHSETITIECTINGMPFQLHAAPGMPLSELLREQGLLSVKQGCCVGECGACTVLVDGTA IDSCLFLAAWAEGKEIRTLEGEAKGGKLSHVQLAYAKSGAVQCGFCTPGLIMATTAMLAK PREKPLTITEIRRGLAGNLFRCTGDQMIVNT >gi|296918703|gb|GG772997.1| GENE 101 106703 - 107581 550 292 aa, chain - ## HITS:1 COG:ygeT KEGG:ns NR:ns ## COG: ygeT COG1319 # Protein_GI_number: 16130769 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli K12 # 1 292 1 292 292 555 96.0 1e-158 MFDFASYHRATTLADAITLLADNPQAKLLAGGTDVLIQLHHHNDRYRHIVDIHNLAELRG ITQAEDGALRIGSATTFTQLIEDPVIQRNLPALCAAAASIAGPQIRNVATYGGNICNGAT SADSATPTLIYDAKLELHSPRGVRFVPINGFHTGPGKVSLEHDEILVAFHFPPQPKEHAG SAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFGVAAPTPIRCQHAEQTAQNAPLN LQTLEAISESVLQDVAPRSSWRASKEFRLHLIQTMTQKVISEAVAAAGGKLQ >gi|296918703|gb|GG772997.1| GENE 102 107592 - 109889 1815 765 aa, chain - ## HITS:1 COG:ygeS KEGG:ns NR:ns ## COG: ygeS COG1529 # Protein_GI_number: 16130768 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli K12 # 14 765 1 752 752 1527 99.0 0 MEAREATATGESCMRVDAIAKVTGRARYTDDYVMAGMCYAKYVRSPIAHGYAVSINDEQA RSLPGVLAIFTWEDVPEIPFATAGHAWTLDENKRDTADRALLTRHVRHHGDAVAIVVARD ELTAEKAAQLVSIEWQELPVITSPEAALAEDAAPIHNGGNLLKQSTMSTGNVQQTIDAAD YQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSSTQIPHIVRRVVGQALDIPWSCVR VIKPFIGGGFGNKQDVLEEPMAAFLTSKLGGIPVKVSLSREECFLATRTRHAFTIDGQMG VNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAYLYPRCAYAYSSKTCYTNLPSAG AMRGYGAPQVVFAVESMLDDAATALGIDPVEIRLRNAAREGDANPLTGKRIYSAGLPECL EKGRKIFEWEKRRAECQNQQGNLRRGVGVACFSYTSNTWPVGVEIAGARLLMNQDGTINV QSGATEIGQGADTVFSQMVAETVGVPVSDVRVISTQDTDVTPFDPGAFASRQSYVAAPAL RSAALLLKEKIIAHAAVMLHQSAMNLTLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERG GQLSAESSIKTTTNPPAFGCTFVDLTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHG GMGMGIGWALFEEMIIDAKSGVVRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKS LGEPPIIPVAAAIRNAVKMATGVAINTLPLTPKRLYEEFHLAGLI >gi|296918703|gb|GG772997.1| GENE 103 110303 - 111058 362 251 aa, chain + ## HITS:1 COG:ygeR KEGG:ns NR:ns ## COG: ygeR COG0739 # Protein_GI_number: 16130767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli K12 # 1 251 9 259 259 445 99.0 1e-125 MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTVKRGDTLYRISRTTGTS VKELARLNGISPPYTIEVGQKLKLGGAKSSSSTRKSTAKSTTKTASVTPSSAVPKSSWPP VGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYAAGAGKVVYVGNQLRGYGNLI MIKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGSTDAASVRLHFQIRYRATAIDPLR YLPPQGSKPKC >gi|296918703|gb|GG772997.1| GENE 104 111544 - 112773 570 409 aa, chain - ## HITS:1 COG:ECs3702 KEGG:ns NR:ns ## COG: ECs3702 COG0814 # Protein_GI_number: 15832956 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 409 1 409 409 707 100.0 0 MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQ FILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHM VIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLIAYFLFLSIYLVGSWQPDLL TTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLI ICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKS FLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYA ISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGILCVSVMFFS >gi|296918703|gb|GG772997.1| GENE 105 113028 - 114209 1074 393 aa, chain + ## HITS:1 COG:ECs3701 KEGG:ns NR:ns ## COG: ECs3701 COG0183 # Protein_GI_number: 15832955 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli O157:H7 # 1 393 2 394 394 717 99.0 0 MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAG AGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAIQCGEADIVIAGGQENMSR APHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVTAENLAREYGISRQLQDAYAL SSQQKARAAIDAGRFKDEIVPVITQSNGQTLVVDTDEQPRTDTSAEGLARLNPSFDSLGS VTAGNASSINDGAAAVMMMSEAKARALNLPVLARIRAFASVGVDPALMGIAPVYATRRCL ERVGWQLADVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVS LVHEMVKRNARKGLATLCIGGGQGVALTIERDE >gi|296918703|gb|GG772997.1| GENE 106 114496 - 115332 671 278 aa, chain + ## HITS:1 COG:kduI KEGG:ns NR:ns ## COG: kduI COG3717 # Protein_GI_number: 16130747 # Func_class: G Carbohydrate transport and metabolism # Function: 5-keto 4-deoxyuronate isomerase # Organism: Escherichia coli K12 # 1 278 1 278 278 581 99.0 1e-166 MDVRQSIHSAHAKTLDTQGLRNEFLVEKVFVADEYTMVYSHIDRIIVGGIMPVTKTVSVG GEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDT ATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNRRTINKYFVPDVLETCQLSMG LTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQPQETRHIVMHNEQAVISP SWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKDLR >gi|296918703|gb|GG772997.1| GENE 107 115362 - 116135 763 257 aa, chain + ## HITS:1 COG:ECs3699 KEGG:ns NR:ns ## COG: ECs3699 COG1028 # Protein_GI_number: 15832953 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 493 99.0 1e-139 MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIKQVTALGRRFL SLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSV FFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHN INVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYVN GYTIAVDGGWLARLFLS >gi|296918703|gb|GG772997.1| GENE 108 116509 - 117867 1330 452 aa, chain + ## HITS:1 COG:ECs3698 KEGG:ns NR:ns ## COG: ECs3698 COG0477 # Protein_GI_number: 15832952 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 452 21 472 472 817 100.0 0 MNMFVSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNG WLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEM ASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPN SPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVF LGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDK AGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVV WILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVG ITFWLIPETKNVTLEHIERKLMAGEKLRNIGV >gi|296918703|gb|GG772997.1| GENE 109 118007 - 118699 646 230 aa, chain + ## HITS:1 COG:ECs3697 KEGG:ns NR:ns ## COG: ECs3697 COG1794 # Protein_GI_number: 15832951 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 456 99.0 1e-128 MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVDFHEIEECQRRGEWDKT GDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCSLPFLHIADATGRAITGAGMTRV ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ VIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAAIHAEDAVAFMLS >gi|296918703|gb|GG772997.1| GENE 110 118686 - 119621 813 311 aa, chain - ## HITS:1 COG:lysR KEGG:ns NR:ns ## COG: lysR COG0583 # Protein_GI_number: 16130743 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 311 1 311 311 568 98.0 1e-162 MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERIRGRLHP TVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARY PDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEVCVLPPGHPLAV KKVLTPDDFHSENYISLSRTDSYRQLLDQLFTENQVKRRMIVETHSAASVCAMVRAGVGV SVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSEHLQAGLPKLVTS LDAILSSATTA >gi|296918703|gb|GG772997.1| GENE 111 119743 - 121005 1280 420 aa, chain + ## HITS:1 COG:lysA KEGG:ns NR:ns ## COG: lysA COG0019 # Protein_GI_number: 16130742 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Escherichia coli K12 # 1 411 1 411 420 829 99.0 0 MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIH ILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVN AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR HHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVLEFGQDLQAISAGGGLSIPYQQGEEAVD TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDA GFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRA LPEVKACDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL >gi|296918703|gb|GG772997.1| GENE 112 121012 - 122043 906 343 aa, chain - ## HITS:1 COG:galR KEGG:ns NR:ns ## COG: galR COG1609 # Protein_GI_number: 16130741 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 343 1 343 343 656 99.0 0 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE TIGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV VHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG YLCSNHSISDAEDRLQGYYDALAESGIPANDRLVTFGEPDESGGEQAMTELLGRGRNFTA VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA ELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD >gi|296918703|gb|GG772997.1| GENE 113 122629 - 124788 2021 719 aa, chain + ## HITS:1 COG:ECs3693_2 KEGG:ns NR:ns ## COG: ECs3693_2 COG0318 # Protein_GI_number: 15832947 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 196 719 1 524 524 1064 99.0 0 MLFSFFRNLCRVLYRVRVTGDTKALKGERVLITPNHVSFIDGILLALFLPVRPVFAVYTS ISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDG AGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVEMPDAPRARD RRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTK TLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRIPAMMNYTAGVKGLTSAITA AEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQV KQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFG LTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYR LRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGM DARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENIRGEMERDWYDTGDIVR FDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFT TDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE >gi|296918703|gb|GG772997.1| GENE 114 124781 - 125974 1388 397 aa, chain + ## HITS:1 COG:ECs3692 KEGG:ns NR:ns ## COG: ECs3692 COG0477 # Protein_GI_number: 15832946 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 397 1 397 397 638 98.0 0 MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVG AYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAK YGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHILVALVACALAYGGAVVA NIYIPKLAAARPGQSWNLISMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFS LQHELLPAYALLMLIGVLGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLG IYSLAVMVGIPVVPIGIGFGALFALAITALWIWQRRH >gi|296918703|gb|GG772997.1| GENE 115 126031 - 127071 1157 346 aa, chain - ## HITS:1 COG:tas KEGG:ns NR:ns ## COG: tas COG0667 # Protein_GI_number: 16130738 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 346 1 346 346 696 99.0 0 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN ETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGT LTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQP FVASTLLGATTMEQLKTNVESLHLELSEDVLAEIEAVHQVYTYPAP >gi|296918703|gb|GG772997.1| GENE 116 127179 - 127397 238 72 aa, chain - ## HITS:1 COG:no KEGG:G2583_3488 NR:ns ## KEGG: G2583_3488 # Name: ygdR # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 72 1 72 72 132 100.0 5e-30 MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDDDTGLVSYHDQQGNAMQ INRDDVSQIIER >gi|296918703|gb|GG772997.1| GENE 117 127535 - 128248 822 237 aa, chain - ## HITS:1 COG:ECs3689 KEGG:ns NR:ns ## COG: ECs3689 COG0861 # Protein_GI_number: 15832943 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 381 100.0 1e-106 MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMR LALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKT RVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDFVE RHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLNLIRNKKNPL >gi|296918703|gb|GG772997.1| GENE 118 128317 - 129006 741 229 aa, chain - ## HITS:1 COG:ECs3688 KEGG:ns NR:ns ## COG: ECs3688 COG3066 # Protein_GI_number: 15832942 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair protein # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 431 99.0 1e-121 MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENLKRDKGWIGVLLEIWLG ASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRV LWIPVEGERSIPLAKRRVGSPLLWSPNEEEDRQLREDWEELMDMIVLGQIERITARHGEY LQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFTSALLARHFLIQ >gi|296918703|gb|GG772997.1| GENE 119 129192 - 129338 86 48 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3390 NR:ns ## KEGG: ECO103_3390 # Name: ygdT # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 48 1 48 48 95 100.0 6e-19 MLSTESWDNCEKPPLLFPFTALTCDETPVFSGSVLNLVAHSVDKYGIG >gi|296918703|gb|GG772997.1| GENE 120 129691 - 130221 251 176 aa, chain + ## HITS:1 COG:ECs3687 KEGG:ns NR:ns ## COG: ECs3687 COG0494 # Protein_GI_number: 15832941 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 340 100.0 1e-93 MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPE FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG >gi|296918703|gb|GG772997.1| GENE 121 130234 - 132480 2052 748 aa, chain + ## HITS:1 COG:ECs3686 KEGG:ns NR:ns ## COG: ECs3686 COG3605 # Protein_GI_number: 15832940 # Func_class: T Signal transduction mechanisms # Function: Signal transduction protein containing GAF and PtsI domains # Organism: Escherichia coli O157:H7 # 1 748 1 748 748 1433 99.0 0 MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKK PRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQ LLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLTALFGQYRQTRIRALPAAPGV AIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAA IFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVIEKFAEQFAALSDNYLKERAGDLRA LGQRLLFHLDDANQGPNAWPERFILVADELSATTLAELPQDRLVGVVVRDGAANSHAAIM VRALGIPTVMGADIQPSVLHRRTLIVDGYRGELLVDPEPVLLQEYQRLISEEIELSRLAE DDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVR AMLRANAATGNLNILLPMVTSLDEVDEARRLIERAGREVEEMIGYEIPKPRIGIMLEVPS MVFMLPHLAKRVDFISVGTNDLTQYILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEI HGIDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRRIDFAEAENLAQRSLE AQLATEVRHQVAAFMERRGMGGLIRGGL >gi|296918703|gb|GG772997.1| GENE 122 132631 - 133506 1010 291 aa, chain + ## HITS:1 COG:ECs3685 KEGG:ns NR:ns ## COG: ECs3685 COG0682 # Protein_GI_number: 15832939 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Escherichia coli O157:H7 # 1 291 1 291 291 548 100.0 1e-156 MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENL LYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRT KRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTN PQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRI IVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS >gi|296918703|gb|GG772997.1| GENE 123 133534 - 134307 915 257 aa, chain + ## HITS:1 COG:ECs3684 KEGG:ns NR:ns ## COG: ECs3684 COG0207 # Protein_GI_number: 15832938 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Escherichia coli O157:H7 # 1 257 8 264 264 553 100.0 1e-158 MQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDT NIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRR IIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHM MAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDF EIEGYDPHPGIKAPVAI >gi|296918703|gb|GG772997.1| GENE 124 134492 - 134962 267 156 aa, chain + ## HITS:1 COG:ppdA KEGG:ns NR:ns ## COG: ppdA COG2165 # Protein_GI_number: 16130730 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 1 156 1 156 156 291 98.0 5e-79 MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWH NRDHSISLIREGTLWCLVSSVAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTA WAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL >gi|296918703|gb|GG772997.1| GENE 125 134953 - 135516 615 187 aa, chain + ## HITS:1 COG:ppdB KEGG:ns NR:ns ## COG: ppdB COG4795 # Protein_GI_number: 16130729 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Escherichia coli K12 # 1 187 1 187 187 369 96.0 1e-102 MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTNTRKLALEDEIWLRVFTVAK HLQRAGYCHGSCTGEGLEIVGQGDCVIVQWDANSNGIWDREPVKESDQIGFRLKEHVLET LRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMHAASKADPQTVVDASY SVTGSNL >gi|296918703|gb|GG772997.1| GENE 126 135513 - 135920 258 135 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_3151 NR:ns ## KEGG: ECUMN_3151 # Name: ygdB # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 135 1 135 135 227 100.0 1e-58 MNREKGVSSLALVLMLLILGSLLLQGMSQQDRSFASRVSMESQSLRRQAIVQSALEWGKM HSWQTQPAVQCLLYAATGARVCLRLLADNEALLIAGYEGVSLWRTGEVIDGNIVFSPRGW SDFCPLKERALCQLP >gi|296918703|gb|GG772997.1| GENE 127 135905 - 136228 85 107 aa, chain + ## HITS:1 COG:ppdC KEGG:ns NR:ns ## COG: ppdC COG4967 # Protein_GI_number: 16130727 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilV # Organism: Escherichia coli K12 # 1 107 1 107 107 181 99.0 3e-46 MSASLRNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASRNQYQQLWRHGWQQTQL RAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNRQ >gi|296918703|gb|GG772997.1| GENE 128 136241 - 139609 3173 1122 aa, chain + ## HITS:1 COG:recC KEGG:ns NR:ns ## COG: recC COG1330 # Protein_GI_number: 16130726 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Escherichia coli K12 # 1 1122 1 1122 1122 2211 99.0 0 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTDELG QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL PDAETEAAMTLIEQQWQAIISEGLGAQYGDAVPLSLLRDELALRLDQERISQRFLAGPVN ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL TCHHTRMPFDPQNYQPGNLQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNVLVEQDDAERLFRR FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS >gi|296918703|gb|GG772997.1| GENE 129 139785 - 142673 2649 962 aa, chain + ## HITS:1 COG:ptr KEGG:ns NR:ns ## COG: ptr COG1025 # Protein_GI_number: 16130725 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Secreted/periplasmic Zn-dependent peptidases, insulinase-like # Organism: Escherichia coli K12 # 1 962 1 962 962 1845 99.0 0 MPRSIWFKALLLFVALWAPLSQAETGWQPIQETIRKSDKDNRQYQAIRLDNGMVVLLVSD PQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNA STAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMR MAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKP LPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNS AKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAIFASLTDK GLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMI RVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDK ISEQTFADWQKKAANIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSR YFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANN GLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMP AQMLSQVPYFSRDERRKILPSITLKEVLAYRDTLKSGARPEFMVIGNMTEAQATTLARHV QKQLGADGSEWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLG QIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAE AKLRAMKPEEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLL TPQKLADFFHQAVVEPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEK NE >gi|296918703|gb|GG772997.1| GENE 130 142666 - 146208 3139 1180 aa, chain + ## HITS:1 COG:ECs3677 KEGG:ns NR:ns ## COG: ECs3677 COG1074 # Protein_GI_number: 15832931 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Escherichia coli O157:H7 # 1 1180 1 1180 1180 2258 98.0 0 MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL VVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYKRLLEEIDDKAQAAQWLLLAERQ MDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIA QVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDAVKQQWRDAV GELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEETNSYQLPESLEKFSQRFLEDRTKA GGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDS ALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIY AFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKS AGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQICDWLQAGQRGEALL MNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLL QAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPM LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDS NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDL NAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGR LLQKGEPQDAAGLRTCIEALCNDDIAWQTAQIGDNQPWQVNDALTAELNARTLQRLPGDN WRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFE DLDFTQPIDPNWVQEKLELGGFEPQWELVLTEWITAVLQAPLNETGVSLNQLSDRDKQVE MEFYLPISEPLIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLD YKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFGGVIY LFLRGVDKEHPQQGIYATRPNAGLIDLMDEMFASMTLEEA >gi|296918703|gb|GG772997.1| GENE 131 146208 - 148034 1418 608 aa, chain + ## HITS:1 COG:recD KEGG:ns NR:ns ## COG: recD COG0507 # Protein_GI_number: 16130723 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Escherichia coli K12 # 1 607 1 607 608 1160 99.0 0 MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLEN NEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVA RFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTT VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTL HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQ LASVEAGAVLGDICAYANAGFTAERAGQLSRLTGSHVPAGTGTEAASLRDSLCLLQKSYR FGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLD LLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGR PVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHK SQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGL AALFSSRG >gi|296918703|gb|GG772997.1| GENE 132 148096 - 149427 1254 443 aa, chain - ## HITS:1 COG:ECs3675_1 KEGG:ns NR:ns ## COG: ECs3675_1 COG0548 # Protein_GI_number: 15832929 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 291 1 291 291 581 100.0 1e-166 MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSSIVNDIGLLHSLGIRLV VVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAGTLQLDITARLSMSLNNTP LQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDAIHRQLDSGAIVLMGPVAVSV TGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDDGDIVSELFPNEAQARVEAQEEK GDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGALLQELFSRDGIGTQIVMESAEQIRR ATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDNTTIACAALYPFPEEKI GEMACVAVHPDYRSSSRGEVLLERIAAQAKQSGLSKLFVLTTRSIHWFQERGFTPVDIDL LPESKKQLYNYQRKSKVLMADLG >gi|296918703|gb|GG772997.1| GENE 133 149569 - 149757 145 62 aa, chain + ## HITS:1 COG:ECs3674 KEGG:ns NR:ns ## COG: ECs3674 COG0860 # Protein_GI_number: 15832928 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 62 1 62 447 113 96.0 8e-26 MTDYASFAKVSGQIGRLLVTQLRFLLLGRGMSGSNTAISRRRLLQGAGAMWLLSVSQVSL AS >gi|296918703|gb|GG772997.1| GENE 134 149809 - 150954 1044 381 aa, chain + ## HITS:1 COG:ECs3674 KEGG:ns NR:ns ## COG: ECs3674 COG0860 # Protein_GI_number: 15832928 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 381 67 447 447 721 99.0 0 MAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDP FIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLA LLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVL QIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSG SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFG KAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVA ESILAGIKAYFADGATLARRG >gi|296918703|gb|GG772997.1| GENE 135 151212 - 152036 469 274 aa, chain + ## HITS:1 COG:lin2530 KEGG:ns NR:ns ## COG: lin2530 COG3711 # Protein_GI_number: 16801592 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 1 267 1 269 285 145 35.0 7e-35 MIIEKVMNNNCVQASMNGQEVIISGPGVGYNKKYGMSVPEHPANRIFYVRNEQKNKLYKL IEHVDIEYVFVAEKIVQYAEKNLEKNLNPSLLLILADHISNAISRVVSGIQINNVFLDEI KALYKAEYAISRDALTIINEQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQII TELIEVVYNRKVDRSSFNYSRFMMHLKYFSSRVLCNEKIKQKDIGDIYEQFLEKDILLQR AIHEIERYLYATFKYELILEEKLYLSIRTKVLMD >gi|296918703|gb|GG772997.1| GENE 136 152068 - 153648 1399 526 aa, chain + ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 7 421 12 430 450 330 42.0 3e-90 MKQKKAWSFFQSLGKAFMYPIALLSVCGMMLGLGSGLASDDMAKLIPFLAIPIIKTILDF IVSLGLFAFVNLPVLFAIAIPLGLLKDKEDKAYGAFSGLIGFMAMHLGTNFYLKQHDLLV VADQMSTHGQTIILGIQSYNTSVLGGIVAGLLVASMYKKIVNLRIPESLGFYSGPRLVPI ITLIVMSGFGLIIPFIWPPFFNLFMLIGHWISTSGPVGYFFYAVAERVTIPFGLNHLVTS VFRFTPIGGSAVIGGEEYYGTLNMFMAYVKENAVIPLDLAGKMEQGKLMIQYGLAGAALA MYRTAHAQNRKAIKALLISGVLTVIIGGVSEPIEFLFLFVSPLLFVFHAFMNGFANMVLP YMGVKMGFTGDLIQFISFGVLRGTRTGWPIAVCVEVAYFFIYYFVFRWTILKFNLMTVGR EESNPVTLNVHEDTAIADIPTPDKSELQAAEQMVKALGGKENIKSLDNCVTRLRLTIADM GLIDEVAIKRAGGIAVVKLDQNTLQVIIGTKVIALRRDMDNYMGIY >gi|296918703|gb|GG772997.1| GENE 137 153648 - 154823 173 391 aa, chain + ## HITS:1 COG:ECs2330 KEGG:ns NR:ns ## COG: ECs2330 COG1168 # Protein_GI_number: 15831584 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Escherichia coli O157:H7 # 4 387 4 389 390 286 36.0 3e-77 MDVFNTPVSRKGTYCTQWDFCEDRFGVKDVLPFSISDMDLPIPDAITRALKKRLEHPILG YSRWQHGEYLNAIVNWYYQQYQTDIKPEWITYSPSVMYSIAKAIELLTSHGDNILVFTPV YNAFFDVIKHSERNILTASLIIKNEGGYAINWQDFDLKIKSAKMVLLCNPHNPTGTVWSE EELHKIAASCTRHNVWLCSDEIHSDFVFNRSFTSALKIKKEKVVVFNSISKTFNVPALTG SYMISTDDNFNHKFRTISRYRDFVNSPSVLNIIATIIAYNECEGWLKSLKAHIASNIQFT QQYLNENIPELIVRPADGCYFSWIDCSAIGYPFDEFYSRLIHEGKVGIMAGHVYGTEGEG YLRLNLACGREKLYMGLTRLVSVIKNINQGE >gi|296918703|gb|GG772997.1| GENE 138 154826 - 155422 460 198 aa, chain + ## HITS:1 COG:yrbH_1 KEGG:ns NR:ns ## COG: yrbH_1 COG0794 # Protein_GI_number: 16131087 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 17 195 18 201 212 169 52.0 3e-42 MNNTDLIYLIKHFMHNELKAVEEVIYSPLSEFANLIKVLQSCQGKVVFIGVGKSGIIARK LAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYL ISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKKFTR ADFGLYHPGGALGIKANS >gi|296918703|gb|GG772997.1| GENE 139 155494 - 156441 388 315 aa, chain + ## HITS:1 COG:AGpA578 KEGG:ns NR:ns ## COG: AGpA578 COG0111 # Protein_GI_number: 16119626 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 315 3 317 317 229 38.0 7e-60 MKNVLVTFPSFSARCVSASKLLRENNFNLIIKNNVEHLLKSESTALRESICAVIAGKDGY QADTLSLLPGVRIISRFGTGIDNIDLRAAQQSGIVVNNAVGINSNAVAEFIIGLIFASMR NIPGSYHAMQNGYWGESHGCELQGKRIGLVGYGNIGKTLAKRLSGFDVELLAFDKQPDYQ VADKAGVQFVSIEDIFMQSHVIIVLLPFSSELENFISHKYLSMMRNGALIINAARGKLLD EGALLQVIEERNVFAALDVFSSEPLAQFSPLLHAKNIITTPHIAAATVESYQQTGIHVAQ SIIDYFAGREIKNVL >gi|296918703|gb|GG772997.1| GENE 140 156743 - 158119 895 458 aa, chain - ## HITS:1 COG:YPO1489 KEGG:ns NR:ns ## COG: YPO1489 COG3515 # Protein_GI_number: 16121762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 14 450 12 449 455 251 40.0 2e-66 MASNANFISQFVMGGDPCTYKESGELQAEMSKLTHPARPDVDWRQVEKLSLALFRQNGVE LQTLVCYVLAITRRQGLAGMADGLGSLDILLQRWADFWPVQVHSRISLLSWVTEKMQQAL RTLDIQYQDLPQIYRCVQHLSTIETTLQQCELWHMTKLDVLSGQFRNTALRLERLAPQGA ETTITPPELPRREMNQPKKSEESPQPVFATRSVQQNDKDASPPVPSPEISRQRTWPIFMA GMVVMAGLGGTGLWGWSQLNQPDALIQRIQLSVMPLPQSLESGELAKLDVKDKALLAQDR TIAASQMQLEQLNKLPARWPLEQGYRQLRQLDALWPDNPQVRALNAQWRKQRELSALSAE ALNGYAQAQSQLQRLSAQLDALDERKGRYLTGSELKTAVYGIRQSLKEPPLEELLRQLEE QKQTGEVSPTLLTQIDTRLNQLLNRYVILLDTKVEQSQ >gi|296918703|gb|GG772997.1| GENE 141 158119 - 158547 434 142 aa, chain - ## HITS:1 COG:YPO1488 KEGG:ns NR:ns ## COG: YPO1488 COG3518 # Protein_GI_number: 16121761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 138 5 141 150 152 59.0 2e-37 MSTPSLYEMLTFSFSGELPLEQISERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLS LIHQGMAAGIHGLMRQIEETLLRYEPRLSQIQVELLPQPRPGHLNYLIHAQLPDTGWIRF DGVFSPEGRIVLRHLKQQERAY >gi|296918703|gb|GG772997.1| GENE 142 158551 - 159087 651 178 aa, chain - ## HITS:1 COG:YPO1487 KEGG:ns NR:ns ## COG: YPO1487 COG3521 # Protein_GI_number: 16121760 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 19 172 1 157 162 141 47.0 6e-34 MFPIRFKRPALLCMAMLTVVLSGCGLIQKVVDESKSVASAVFYKQIKILHLDFFSRSALN TDAEDTPLSTMVHVWQLKTREDFDKADYDTLFMQEEKTLEKDVLAKHTVWVKPEGTASLN VPLDKETQFVAIIGQFYHPDEKSDSWRLVIKRDELEADKPRSIELMRSDLRLLPLKDK >gi|296918703|gb|GG772997.1| GENE 143 159068 - 160147 821 359 aa, chain - ## HITS:1 COG:YPO1486 KEGG:ns NR:ns ## COG: YPO1486 COG3520 # Protein_GI_number: 16121759 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 342 1 345 361 379 58.0 1e-105 MDRASQPARTGLTDRLAPDIARINFYRFCQLLEQSQQKAPLGSTDNPAADAVRFRPHPGM GFPVSELKNVERDVDNPDAPPTVRTTFLGLYGVDSPLPTAYLDYITQRHDGHDAVMAFLD IFNHRFITQYYRIWRKYNYPASFEAGAVDDISRCLLGLIGLGIPGSENHIATPVSRFLAL LSVMRLPTRTAEGVTALVGLLAPLTKATVVPHDPQPVILPAPAGLSKNSRISLKTRTLLG RTGTDVNSQLLLKLYTEDAAEARGWLPGGQLHSDLLVLLRVYLGWRCQARLQLTLPVSLL PAARLGKQRVQISRTGILRASFAAPATGTVTVSLGRYQGLIPAFSIRNRESMTHVSYSF >gi|296918703|gb|GG772997.1| GENE 144 160111 - 161871 1442 586 aa, chain - ## HITS:1 COG:YPO1485 KEGG:ns NR:ns ## COG: YPO1485 COG3519 # Protein_GI_number: 16121758 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 586 1 587 587 880 72.0 0 MDDLTQRYYEAEMRYLREAGKEFAQAYPDRAAMLNLDKPGARDPYVERLFEGFAFLMGRL REKLDDDLPELTEGLVSLLWPHYLRTIPSLSVVELSTDHRQMKQSETLSDFQVLSRPVGE RRTRCVYSATRDITLHPLALPDVSLQYEPDGRSVIRLRFACGPLVGDWSQIDLSRLPLYL NADSPVACALHRALTLGTQQFWLRLPGQDRRMLGAHFSPMGFEDDDRLWPKGESAFSGYQ LLLEYFTFREKFMFVALNGLEQVAWPEGITGFEIDVVLNENWPHDLPFDSDNIRLHCVPV INLFPLEADPLHLSPLENEFLLRPMRIQDGHTEIYSVDNIISSRHTGSQAYVPFSSFRHR GGMLRHDAPERYYHTRVKRGPSGLHDTWLILGGDAFDSDRMLEDETLSLSLTGTNGQLPR KALQSTLLDTPVHASQNVLRVRNLCAPTQPCYPPARDRFHWRVLSHLGSNFLSMMDNAEI LRGTLALYDWTESEMNRRRLEAIVDVQHSLIQRFERGFLLRGVDIQVTLDSNGFAGEGDI TLFGELLHRFFALYADIHLFTQLTLILQPTGKCLQWTEHHSQRVPG >gi|296918703|gb|GG772997.1| GENE 145 162241 - 162684 75 147 aa, chain - ## HITS:1 COG:no KEGG:APECO1_3699 NR:ns ## KEGG: APECO1_3699 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 147 1 147 147 238 100.0 7e-62 MNIQAIKEMVNLICSFLFIFFLSSAFVSFGCYAIYELFLWNDIIVYSWGYILIVFLPFTL YVMSFEILFFAISGRRLSKVTMVRLWLIIKIIIAFSICAVLIFSSIYKKELLSRNYIACS GIPSGWMPGLATKYVKEKSLCEKNGNN >gi|296918703|gb|GG772997.1| GENE 146 162941 - 163495 265 184 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3100 NR:ns ## KEGG: ECS88_3100 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 184 30 213 213 359 100.0 3e-98 MYRQEYQMVVTVPTADANDPNWPNKRIQFDTSEWLQQLQYIKIDDHYILNTQYTPIANLD DFGITLKLQNALNGSDKRLPALYGLAEMDAQKFKDLMRGKIKCEYLRTTFDAETLKPVND YFLISFTYKDKWYEFETERKISKTSDDGYFLWAFDNTVHEAGYWHNTDPAAYSYRDYQNG KAVK >gi|296918703|gb|GG772997.1| GENE 147 163570 - 165147 491 525 aa, chain - ## HITS:1 COG:YPO0873 KEGG:ns NR:ns ## COG: YPO0873 COG5529 # Protein_GI_number: 16121180 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Yersinia pestis # 1 91 1 91 512 122 62.0 2e-27 MGTGYFLVRGDKTTCGGKIIEGADDHTIMGIPQARDMDRVTCGRYPGMFIIVGGVPETDI HGRLMAGSLDSQSSCPCKARFIASMMDDTYETDDGGSEPEQHAQSARKNLTSGNPDKKYS HQIKLQHGENNVSVQDIPYVFILNNNMSLSGKTNQDGETERIYTDTAQKVIALTGKLADS WLKRGKNFGSLKEIDNRKIELTTEENEPVKYVNWINGRDYIVIVAARTAVTNWIGMEDSK GNQYRFINCGLEQLQQFPPASKQDSSSQRIMVVFSLGYTQKDIDRINDYTKAHDGRIIYV KNKDELVSFLNQRKEKGRVIKELVILCHGVIKTASYHYHHEDKDIEKNGMFKHEDIAAVH ESVFDYDAHVTTYACRAGISDGDKDFSGKDDAGQKDSPAQKMADNWDVMVKAFEMRSDYS LAYGTGKEIKEAQEYGSVVEKYKKDIDMYNKEKAKGNTEVSPPVKPEGYDEKSKRHADVT TRDKNEKSGGGPIAPNGAWHMPRTGDSPKGLKSGLQDYQPEEWVQ >gi|296918703|gb|GG772997.1| GENE 148 165153 - 166763 1708 536 aa, chain - ## HITS:1 COG:YPO1483 KEGG:ns NR:ns ## COG: YPO1483 COG3515 # Protein_GI_number: 16121755 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 5 530 4 532 533 581 60.0 1e-165 MSELLQKLTRSCFADRDALDVARTQAALWQTWLLPVTADTPVGEDPGYHDDFLRIRDEMN KLSGTDTGLICQLAESLLLTQAKDVRIATYYIWARLHRDGERGLAEGLALLTGLVERFGT QLLPSRPASRKMALEWLAGEKMLDSLARYPEVAKEDFANIVAALNQLTVSFTAWPEDQHS PSLMPLINALESRLAQSGGMNAVVPQNSSSVTAPSSPVDAPQVQTITSGRDLLDQAKVLA RYLNEQPQGWLSAHRLMKTLRWDTVHELPPDVDGKTRLAPPRTESRNQLKRLYAQQNWTE LLEQADLMFSTGVSHFWLDIQWYLHQALTKAGVPWDRWTAVIRQDLALLLERLPGLENLA WNDGTPFADEVTRNWIAQQVMMREDGAWLAGKAAVPTDDATNDVLALEPEALAMADSQGV EAALGWIQTRPGITTARQRLLLRLLMARVAEQYGKNEMALLLLEELDTAAQGITLTQWEP ELLFEVKARQLKLLRLRAHRYADKALLNRKMEILLGTLVAIDPARAAVLCDTQHKD >gi|296918703|gb|GG772997.1| GENE 149 166756 - 170109 2896 1117 aa, chain - ## HITS:1 COG:YPO1482 KEGG:ns NR:ns ## COG: YPO1482 COG3523 # Protein_GI_number: 16121754 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 99 1114 114 1140 1140 946 50.0 0 MHTQRYGFWGYLILIIGLAGICALLIIINQDVLIKSGVSARLIWGIWAGLFSLFLLGVVC SPFWWIRKQRKAQFIYRPKNSAENDQPVSSPSEDILTDLSSNIRLRYGPFWRRKVRLLLV TGEPEEAEAIAPGLTGQHWLEGDHTVLIYGGRPTAEPDVTLLTALKKLRRSRPLDGIIWP LTEEQSRQTAQLDKGWRELINGGKRLGFQAPLYLWQVCDDGDYQTGRPLQSVGCLLPERC TPEQLAVMLEAQTLPLTEQGMSQLLADNRHDFLLRLAHTLAERGIAHWQSVLKPLLAGGA FSSLRLRGLMFSPPLAAVPEAAPHAWLPSPVWAGVTGDNARGRTVGFPWLRTALMSAVCV LVIWGAGMTTSFFANRALVQETGIQTARALDTRLPLAEQLVALHTLQGELERLQYRIREG APWYQRFGLERNQQLLAAAFPGYAQAANRLVRDVAVDHLQQQLNAFVALPPNSPQRTATG EQRYKQLKALLMTSRPEKADAAFFSTTLMADGLRYENIPEGVRQSVLPSLLTFWTANLPE HPQWKTSPPPELTGAVRKILLRQIGVRNAENTLYQNVLQQVSRNYADMTLADMTGDTLTE SLFSTEQTVPGMFTRQAWEGQVREAIEQVVTARREEIDWVLSDRQQDTSADISPDTLRNR LTSRYFTDFAGSWLAFLNSIRWKKEDSLSGILDQLTLMADARQSPLIALTDTLAWQAAAG RENRGLSDSLAKSAQELFNGKEKTPQQSREGNEPVGPLDKTFAPLLRLLGDKAGGGGGDT QLSLQTYLTRVTRVRLKLQQVTNAPDPQEMTQQLAQTVLQGKTVDLTDTRDYGRLIAASL GEEWSGFGQALFVRPVEQSWRQVLTPAADSLNRQWQRAIVSHWNQDFAGRYPFKASQNDA SLPLLAQYLRDDGRINQFIAANLSGVLKREGRYWVADAMNTQGLTVNPDFIRALNRLRDV ADTAFASGDAGIHFELRAKPARDVMKTHLVIDGQELEYFNQKERWQRFNWPDEQWQPGAS LSWTSTQAMERILADYRGSWSLIRLLEQAQVTPVDSSTFKVVWKAQDGLPLNYLLRVEQG KGPLALLELKNFRLPGQVFLTGRSMKDAEEYGEDADE >gi|296918703|gb|GG772997.1| GENE 150 170119 - 171171 355 350 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3096 NR:ns ## KEGG: ECS88_3096 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 350 66 415 415 690 100.0 0 MLTVGTLFILSVWNSATYWDIFIYGVLPMLFLWLCLFGIALNKYEQSVAACISWESERQQ VKQLWQHWSQKQLAIVGNVLFTPEEKGMSVLLGPQEEIPAYPKKARPLFSASRYSLSSIF HDIHQQLTQQFPDYRHYLHTIYVLQPEKWRGETVRQAIFHQWDLVPERTNTLNQIQSLYD ERFDGLILVVCLQNWPENKPEDTSELVSAQLISSSSFVRQHQIPVIAGLGRVMPLEPEEL EHNLDVLFEYNQLDNKQLQHVWVSGLDEGTIENLMQYAEQHQWSLPKKRPLHMIDHSFGP TGEFIFPVSLAMLSEAAKETEQNHLIIYQSAQYAQKKSLCLITRKLYLRT >gi|296918703|gb|GG772997.1| GENE 151 171257 - 171517 154 86 aa, chain - ## HITS:1 COG:YPO0866 KEGG:ns NR:ns ## COG: YPO0866 COG4104 # Protein_GI_number: 16121173 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 79 14 92 101 69 44.0 2e-12 MPGIVCLGDATTHGGKVITATSTLFINGIQVALVGDLVSCPKHGVNPIQEGDPTATEKGR NVVVNHCQCACGCRVISSQPENSIES >gi|296918703|gb|GG772997.1| GENE 152 171981 - 172274 182 97 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3094 NR:ns ## KEGG: ECS88_3094 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 97 1 97 97 177 100.0 1e-43 METEHGITLYKGRKKINGLEISEWWVRKQIMLNSEPSRDYEFNLAIHEDKKNNKQLLKLV MNYSVDILHADNALTEHELMALWESITGTIKYHPTQW >gi|296918703|gb|GG772997.1| GENE 153 172243 - 172833 302 196 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3093 NR:ns ## KEGG: ECS88_3093 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 196 82 277 277 384 100.0 1e-105 MIPVETKLQYYPPFLQYMTRYEAELKNTSALDPLDTPYLKQVHPLSPPMNGVIFERMKAK YTPDFARVLDAWKWENGVTFSVKIEAKDGRATRYDGISKIAEYSYGYNIPEKKVQLLTIL SGLQPRADNQPPSENKLAIQYAQVDASLLGEYELSVDYKNSNNIKISLQTDNNSYIDSLL DIRYPSNGNRAWYNSI >gi|296918703|gb|GG772997.1| GENE 154 173051 - 173431 101 126 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C3199 NR:ns ## KEGG: UTI89_C3199 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 126 464 589 589 256 100.0 2e-67 MGKKSDISLEPKFIDGRLDLNEVGNIRTIKDEFSPEEQAWEINTDDGDTYVKIGQRFTLR DSCENGDGTVPLRAGQIVHKNILERLAVQVSHEAAYRNPVSQAFALRSIIKIAQEVKKDG KMSYSD >gi|296918703|gb|GG772997.1| GENE 155 173644 - 174810 508 388 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3091 NR:ns ## KEGG: ECS88_3091 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 388 17 404 404 797 100.0 0 MTSTMHMDRADKNKVGTVEIEDLRVIPVIFLPGVMGSNLMDKKGKSIWRYDDSMSLMGWS LPTSGPKERKRLLHPDRVEVDNRGRIPAPPDAQEKLIQLGQQYPEDPSDKEAMDNYTQAV RDILDNIEPEAKLFGSRKDRGWGEVANASYGSFLDVLQTALYRDKPTKKGETLSATYQQL LDVPLGLEYGPDSLDEEYLEVIRLYQFPVHVVGYNWLGSNMLSAIRLQEQIKKIVGGYQK RGMKCHKVILVTHSMGGLVARYFSECLSGNTDVYGIVHGVLPSIGAAATYTRMKRGTENP ESNPEGYVISHILGRNAAEMVAVFSQSPGPMELLPMNDYGEEWLNIVDRDGSTLTLPKNL PIKEGIAPEERTYAELYLNRENWWMRIY >gi|296918703|gb|GG772997.1| GENE 156 174830 - 177310 1734 826 aa, chain - ## HITS:1 COG:YPO0970_1 KEGG:ns NR:ns ## COG: YPO0970_1 COG3501 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 6 563 10 571 571 785 68.0 0 MGIQNFDHSHHKLKIRGLKSPVDVLTFTGHEQLSSPFRYDIQFTSSDKAIAPESVLMQDG AFSLTAPPVQGMPVQTALHTLHGVITGFKHLSSSQDEARYEVRLEPRMALLTRSRQNAIY QNQTVPQIVEKILRERHQMRGQDFVFNLKSEYPAREQVMQYGEDDLTFVSRLLSEVGIWF RFATDARLKIEVIEFYDDQSGYERGLTLPLRHPSGLFDGETEAVWGLNTAYSVVEKNVTT RDYNYRTATAEMMTEQHDATGGDNTTYGEAYHYADNFLQKGDKEAAESGAFYARIRHERY LNEQAILKGQSTSSLLMPGLEIRVQGDDAPAVFRKGVLITGVTASAARDRSYELTFTAIP YSERYGYRPALIPRPVMAGTLPARVTSTVKNDIYAHIDKDGRYRVNLDFDRDAWKPGYES LWVRQSRPYAGDTYGLHLPLLAGTEVSIAFEEGNPDRPYIAGVKHDSAHTDHVTIQNYKR NVLRTPANNKIRLDDERGKEHIKVSTEYGGKSQLNLGHLVDAGKQQRGEGFELRTDMWGA VRAKKGIFISADAQDKAQGQVLDMTDALAQLREAQSLVEALCSATEVAKAELADLQTQKV MMSEALEELKKSAMLLSAPEGIAQVTPKSLQLSAGENIISTSGKNSDFSVLKKFTVAAGE TVSLFAQKLGIKIFAGKGKVEIQAQGDEMLLDALKDIRISSSEGRILISAKNEIILTSGG GYIRIGDGTVECAAPDKIIERGAVWQKFSGQSISQAMQQWDSADFAVTPEILWQQTGKPA KNQKVQVTRGDGSVVEMTTDEQGRLPIQSGLFVESIKIDLPDSQEN >gi|296918703|gb|GG772997.1| GENE 157 177322 - 178431 607 369 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 30 358 476 805 815 238 38 2e-61 MTLRQEGTDSTELQQQLRTHQGFAPLLALDVDARAVATVVADWTGIPLSSLLRDEQSDLL SMEQSLENRVVGQRPALCAIAQRLRAAKTGLTPENGPQGVFLLTGPSGTGKTETALTLAD TLFGGEKSLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVE KAHRDVMNLFYQVFDRGFMRDGEGREIDFRNTVILMTANLGSDHIMQLLEEKPDATDADL HELLYPLLRDHFQPALMARFQTVIYRPLGQEAMRTIVEMKLAQVVRRLHQHYGLETEIND SLYDQLTAACLLPDTGARNIDSLLNQQILPVLSQQLLAQQAAHRKPAQLRLGWDEEDGIV LEFATEEMQ >gi|296918703|gb|GG772997.1| GENE 158 178578 - 180026 716 483 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 12 477 5 447 815 280 37 5e-74 MTGNHPAALLRRLNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRY EWDIDTLWQSLLAHLDTLPRSVRERPQLSEPLTALIRQAWLIASLEGDDPQIRSQHLLMA LTEKSMLPACNDLWVLLSLSRVQLERLRPLLDAQSDECPARQPQVTEPLTSALPETATAD APAKTLTEKQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPI LVGEPGVGKTALVEGLALRITEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVI DAVQKSPEPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYF ERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAQHHGVHMLDSAIQTAVRLSRRYLTG RQLPDKAVDLLDTAGARVRMSLDTLPEPLTQLHARLAALDIEREAIEQDSVFYPEASPER LGG >gi|296918703|gb|GG772997.1| GENE 159 180218 - 180709 749 163 aa, chain - ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 163 1 163 163 283 84.0 1e-76 MAIPAYLWLKDDGGADIKGSVDVQGREGSIEVVALDHDVYIPTDNNTGKLTGTRTHKPFT FTKEIDASSPYLYKAVTTGQTLKTAEFKFYRINDAGQEVEYFNTTLDNVKLVRVAPLMHD IKDPGKEKHNHLERIEFRYEKITWTYKDGNIIHSDSWNERPSA >gi|296918703|gb|GG772997.1| GENE 160 180767 - 182419 1195 550 aa, chain - ## HITS:1 COG:YPO0974_2 KEGG:ns NR:ns ## COG: YPO0974_2 COG2885 # Protein_GI_number: 16121278 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Yersinia pestis # 430 550 1 123 139 172 69.0 1e-42 MRNTLKQAIVLWGMVLLLVLWSVFISPSGVLRWAGAAAIVLAVAALLIYRRRQAWTEMTG DAGLSSLPPETYRQPVVLVCGGLSAHLFTDSPVRQVSEGLYLHVPDEEQLVAQVERLLTL RPAWASQLAVAYTIMPGIHRDVAVLAGRLRRFAHSMATVRRRAGVNVPWLLWSGLSGSPL PERASSPWFICTGGEVQVATSTENAMPAQWIAQSGVQERSQRLSYLLKAESLMQWLDLNV LAELNGPEAKCPPLAMAVGLVPSLPAVDNNLWQLWITARTGLTPDIADTGTDDALPFPDA LLRRLPRQSGFTPLRRACVTMLGVTTVAGIAALCLSATANRQLLRQVGDDLHRFYAVPVE EFITKARHLSVLKDDATMLDGYYREGEPLRLGLGLYPGERIRQPVLRAIRDWRPPEQKME VTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDATGDE KSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLV PRSDACQDVK >gi|296918703|gb|GG772997.1| GENE 161 182432 - 183097 550 221 aa, chain - ## HITS:1 COG:YPO0975 KEGG:ns NR:ns ## COG: YPO0975 COG3455 # Protein_GI_number: 16121279 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 8 218 13 226 228 203 51.0 2e-52 MKKDMDINIDALLRDTFLTVVELRQGTTVRHGIELYRHCQRQVELVRERLKDAGFSRENV EHITYAQCALLDETVLSRSGMDDGQAIWMKNPLQSHFFNTLQAGELLYERMKQVLQEPAP AQAVLTCFHRVLLLGFRGRYQDPAAPERDQLISTLNGQVAPFGVLPETAVLNVPLSTRQH PLLHSPFFWLVTLALLLAGVWWGLHHWLNVLVDELLPQSLR >gi|296918703|gb|GG772997.1| GENE 162 183094 - 184431 1018 445 aa, chain - ## HITS:1 COG:YPO0976 KEGG:ns NR:ns ## COG: YPO0976 COG3522 # Protein_GI_number: 16121280 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 444 1 449 450 518 59.0 1e-146 MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDCIAQLCIRHPWGIANVLFDRDALTPGKLK TQAVRLRFADGTLIDSDVSDVLPLACDLRALKNDSAIVLLALPLAHGNGGNLGQGEQTER PLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQDYITCPLARLVRDVQGNWTQD ESYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPP LFSLLSELLEASLPSRVIALDLASLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLH QLPLVCKIGAPDDVTLLINVALNGVQLVPLTSVPAALPLRLENQYFALDMHSDAAKSMLE SGSCMIYAPGTMGDLKPELFAVLRT >gi|296918703|gb|GG772997.1| GENE 163 184449 - 185987 1509 512 aa, chain - ## HITS:1 COG:YPO1466 KEGG:ns NR:ns ## COG: YPO1466 COG3517 # Protein_GI_number: 16121741 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 512 3 516 516 864 79.0 0 MSVQQEHSTSETATLTTTESGGVYQSLFDKINLTPVSSIQEIDLWQNSETLADASPDERV TAAIHVLLSCLAKSGEDVVKLDKSLLDFHIDDLDQKISKQLDAVMHHPEFQKVESLWRGT WFVVQRTDFRKNVRIELLDISKEHLRQDFDDSPEIIQSGLYRHTYIQEYDTPGGEPVASL ISSYEFDNSPQDIALLRNISRVSAASHMPFIGSVGPKFFLKNSMEEVAAIKDIGNYFDRA EYIKWKSFRDTDDSRYVGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTNAS FAFAANMVKSFVNNGWCVQIRGPQAGGAVADLPIHLYDLGTGNQVKIPSEVMIPETREFE FANLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIAHYL KIIQRENIGTTKDRRVLELELNTWIRTLVTEMTDPGDELQASHPLRDGKVIVEDIEDNPG FFRVRLFAVPHFQIEGMDINLSLVSQMPKAKA >gi|296918703|gb|GG772997.1| GENE 164 186046 - 186546 495 166 aa, chain - ## HITS:1 COG:YPO1465 KEGG:ns NR:ns ## COG: YPO1465 COG3516 # Protein_GI_number: 16121740 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 164 3 165 166 212 73.0 2e-55 MADSFQNEVPTARVNIKLDLHTGNAKKKVELPLKLLAVGDYSNGKEQRPLSERDKVDINK NNFNSVMAEFSPAVNLTVEDTLNGNGNEQNIALEFKSLKDFEPEQVAKNIPQLRVLLAMR NLLRDLKSNLLDNATFRRELENILKDPTLSSELRDELAKIAPQENV >gi|296918703|gb|GG772997.1| GENE 165 187577 - 188674 1193 365 aa, chain + ## HITS:1 COG:ECs3673 KEGG:ns NR:ns ## COG: ECs3673 COG2821 # Protein_GI_number: 15832927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Escherichia coli O157:H7 # 1 365 1 365 365 739 99.0 0 MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLVNQPDAVGAPINAGDFA EQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGIDAWQMEGVDNYGNVQFTG YYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGALSDKYILAYSNSLMDNFIMD VQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDRGEVKKEDMSMQAIRHWGETHSE AEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRASVASDRSIIPPGTTLLAEVPLLDN NGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIGPEAGHRAGWYNHYGRVWVLKTAPGAG NVFSG >gi|296918703|gb|GG772997.1| GENE 166 188751 - 189557 875 268 aa, chain + ## HITS:1 COG:ygdL KEGG:ns NR:ns ## COG: ygdL COG1179 # Protein_GI_number: 16130719 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Escherichia coli K12 # 1 268 1 268 268 512 99.0 1e-145 MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI DMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMNA GYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGA ATMVTATFGFVAVSHALKKMMAKAARQG >gi|296918703|gb|GG772997.1| GENE 167 189608 - 190051 474 147 aa, chain - ## HITS:1 COG:ECs3671 KEGG:ns NR:ns ## COG: ECs3671 COG2166 # Protein_GI_number: 15832925 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 270 98.0 6e-73 MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQLPALPEELKAQAKEIAG CENRVWLGYTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGKTAAELQAQSPLALFDELG LRAQLSASRSQGLNALSEAIIAAAKQV >gi|296918703|gb|GG772997.1| GENE 168 190051 - 191256 1049 401 aa, chain - ## HITS:1 COG:ECs3670 KEGG:ns NR:ns ## COG: ECs3670 COG0520 # Protein_GI_number: 15832924 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Escherichia coli O157:H7 # 1 401 1 401 401 779 98.0 0 MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYSLSAGNVHRSQFAEAQR LTARYEAAREKVAQLLNASDDKNIVWTRGTTESINMVAQCYARPRLQPGDEIIVSVAEHH ANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPRSRILALGQMSNVTGGCPDLA RAITFAHSAGIVVMVDGAQGAVHFPADVQQLDIDFYAFSGHKLYGPTGIGVLYGKPELLE AMSPWLGGGKMVHEVSFDDFTTQSAPWKLEAGTPNVAGVIGLSAALEWLTDYDINQAESW SRSLATLAEEALAKRPGFRSFRCQDSSLLAFDFAGVHHSDMVTLLAEYGIALRAGQHCAQ PLLAELGVTGTLRASFAPYNTKSDVDALVNAVDRALELLVD >gi|296918703|gb|GG772997.1| GENE 169 191448 - 191675 375 75 aa, chain + ## HITS:1 COG:no KEGG:ECO111_3534 NR:ns ## KEGG: ECO111_3534 # Name: ygdI # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 75 1 75 75 129 100.0 3e-29 MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQ QINRTDVKEMVELDQ >gi|296918703|gb|GG772997.1| GENE 170 192026 - 192943 701 305 aa, chain + ## HITS:1 COG:ECs3668 KEGG:ns NR:ns ## COG: ECs3668 COG0583 # Protein_GI_number: 15832922 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 604 100.0 1e-173 MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL LLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAY PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPL KTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALAN NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFR FRYEQ >gi|296918703|gb|GG772997.1| GENE 171 192962 - 193357 498 131 aa, chain + ## HITS:1 COG:ECs3667 KEGG:ns NR:ns ## COG: ECs3667 COG2363 # Protein_GI_number: 15832921 # Func_class: S Function unknown # Function: Uncharacterized small membrane protein # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 204 99.0 4e-53 MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGLEYQAFHTLAILGLAVA MQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVTPVGGVSFLAGWALMLIGA IRLKRKGVSHE >gi|296918703|gb|GG772997.1| GENE 172 193350 - 194450 1132 366 aa, chain + ## HITS:1 COG:ECs3666 KEGG:ns NR:ns ## COG: ECs3666 COG2933 # Protein_GI_number: 15832920 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 776 99.0 0 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELLKFC RKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYTGYSYSSNNSPFYMGIPRLKF PADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVD NGPMAQSLMDTGQVTWLREDGFKFRPTCSNISWMVCDMVEKPAKVAALMAQWLVNGWCRE TIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRIWAAVG GRRDER >gi|296918703|gb|GG772997.1| GENE 173 194494 - 195225 524 243 aa, chain - ## HITS:1 COG:fucR KEGG:ns NR:ns ## COG: fucR COG1349 # Protein_GI_number: 16130712 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 243 1 243 243 468 99.0 1e-132 MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGRAKYIHR QNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDASSTCWYLARQLPDINIQVF TNSHPICHELGKRERIKLISSGGTLERKYGCYVNPSLISQLKSLEIDLFIFSCEGIDSSG ALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEARIGHLDEVTHIISDERQVTTSL VTA >gi|296918703|gb|GG772997.1| GENE 174 195283 - 195705 413 140 aa, chain - ## HITS:1 COG:ECs3664 KEGG:ns NR:ns ## COG: ECs3664 COG4154 # Protein_GI_number: 15832918 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose dissimilation pathway protein FucU # Organism: Escherichia coli O157:H7 # 1 140 1 140 140 268 100.0 2e-72 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI VITGERAKYGNILLKKGVTP >gi|296918703|gb|GG772997.1| GENE 175 195707 - 197125 1020 472 aa, chain - ## HITS:1 COG:fucK KEGG:ns NR:ns ## COG: fucK COG1070 # Protein_GI_number: 16130710 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 472 11 482 482 953 98.0 0 MKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENNTWHQWSLDAILQRFAD CCRQINSELTDCHIRGIAVTTFGVDGALVDKQGNLLYPIISWKCPRTAAVMDHIERLISA QQLQAISGVGAFSFNTLYKLVWLKENHPQLLERAHAWLFISSLINHRLTGEFTTDITMAG TSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIGTLQNSAAAMLGLPVGIPVISAG HDTQFALFGAGAEQNEPVLSSGTWEILMVRSAQVDTSLLSQYAGSTCELDSQAGLYNPGM QWLASGVLEWVRKLFWTAETPWQILIEEARLIAPGADGVKMQCDLLSCQNAGWQGVTLNT TRGHFYRAALEGLTTQLQRNLQMLEKIGHFKASELLLVGGGSRNTLWNQIKANMLDIPVK VLDDAETTVAGAALFGWYGVGEFNSPEEARAQIHYQYRYFYPQTEPEFIEEV >gi|296918703|gb|GG772997.1| GENE 176 197234 - 199009 1854 591 aa, chain - ## HITS:1 COG:fucI KEGG:ns NR:ns ## COG: fucI COG2407 # Protein_GI_number: 16130709 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Escherichia coli K12 # 1 591 1 591 591 1218 99.0 0 MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDT CIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVY LAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAVASMKGKSYLSL GGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFRY GEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQ GQRHWTDQYPNGDTAEAILNSSFDWNGVRKPFVVATENDSLNGVAMLMGHQLTGTAQVFA DVRTYWSPEAIERVTGHKLDGLAEHGIIHLINSGSAALDGSCKQRDSEGKPTMKPHWEIS QQEADACLAATEWCPAIHEYFRGGGYSSRFLTEGGVPFTMTRVNIIKGLGPVLQIAEGWS VELPKDVHDILNKRTNSTWPTTWFAPRLTGKGPFTDVYSVMANWGANHGVLTIGHVGADF ITLASMLRIPVCMHNVEETKVYRPSAWAAHGMDIEGQDYRACQNYGPLYKR >gi|296918703|gb|GG772997.1| GENE 177 199042 - 200358 843 438 aa, chain - ## HITS:1 COG:fucP KEGG:ns NR:ns ## COG: fucP COG0738 # Protein_GI_number: 16130708 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Escherichia coli K12 # 1 438 1 438 438 805 99.0 0 MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTN FQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAFGAALFWPAAEIMNYTLF LVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSN VPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANY LTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAF MSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELLPAL CFAVIFIFARFRSQTATN >gi|296918703|gb|GG772997.1| GENE 178 200905 - 201552 679 215 aa, chain + ## HITS:1 COG:ECs3660 KEGG:ns NR:ns ## COG: ECs3660 COG0235 # Protein_GI_number: 15832914 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 431 99.0 1e-121 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGIPYEKLTESHIVFIDG NGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRPIPAIHYMIAAAGG NSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEANLEKALWLAHEVEVLAQL YLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE >gi|296918703|gb|GG772997.1| GENE 179 201580 - 202728 1195 382 aa, chain + ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 382 2 383 383 740 99.0 0 MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVIDKMDAAGLA WAIYDGVVPNPTITVVKEGLDVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRS LEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADM MDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGTVAGDKDAGE EMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYR DIARVMGVKVEGMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDV CTGGNPREATLEDIVELYHTAW >gi|296918703|gb|GG772997.1| GENE 180 202833 - 203588 490 251 aa, chain - ## HITS:1 COG:exo KEGG:ns NR:ns ## COG: exo COG0258 # Protein_GI_number: 16130705 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Escherichia coli K12 # 1 251 31 281 281 515 98.0 1e-146 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRH QRLPDYKAGRPPMPEELHNEMPALRAAFEQRGVPCWSASGNEADDLAATLAVKVTQAGHQ ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI DGNLQQLRLVR >gi|296918703|gb|GG772997.1| GENE 181 203700 - 205067 1388 455 aa, chain - ## HITS:1 COG:sdaB KEGG:ns NR:ns ## COG: sdaB COG1760 # Protein_GI_number: 16130704 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli K12 # 1 455 1 455 455 910 99.0 0 MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTRVVVDVYGSLSLTGKGH HTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQHEVEFPVDQCMNFHADNL SLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQDSAPVEVPYPYSSAADLQKH CQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRGGIERGISTEGVLPGKLRVPRRA AALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENAAGGRVVTAPTNGACGIIPAVLAYY DKFIREVNANSLARYLLVASAIGSLYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGA SPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPCIERNAIAAVKAVNAARMALRRTSEPRVC LDKVIETMYETGKDMNAKYRETSRGGLAMKIVACD >gi|296918703|gb|GG772997.1| GENE 182 205134 - 206423 1468 429 aa, chain - ## HITS:1 COG:ECs3656 KEGG:ns NR:ns ## COG: ECs3656 COG0814 # Protein_GI_number: 15832910 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 429 1 429 429 733 99.0 0 METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILA FPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAI TNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLA LYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYG DMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPI IAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINKLNRITALFMLVTT WIVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVVMGLIAI SAIFYSLFS >gi|296918703|gb|GG772997.1| GENE 183 206980 - 208344 1301 454 aa, chain - ## HITS:1 COG:ECs3655 KEGG:ns NR:ns ## COG: ECs3655 COG1611 # Protein_GI_number: 15832909 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Escherichia coli O157:H7 # 1 454 1 454 454 931 100.0 0 MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFEN FDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNL NLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRELN ICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEK RLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLD EFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQ MPFEPSHENMANLKLYPDQPVEVLAADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDK EIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICT >gi|296918703|gb|GG772997.1| GENE 184 208456 - 209304 539 282 aa, chain - ## HITS:1 COG:ECs3654_2 KEGG:ns NR:ns ## COG: ECs3654_2 COG0780 # Protein_GI_number: 15832908 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Escherichia coli O157:H7 # 137 282 1 146 146 307 100.0 1e-83 MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADKPPFYGTDIWTLY ELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLS TCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNYEFTTDYLENATSGEKVVEET LVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDL LRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ >gi|296918703|gb|GG772997.1| GENE 185 209372 - 209917 476 181 aa, chain + ## HITS:1 COG:no KEGG:ECB_02638 NR:ns ## KEGG: ECB_02638 # Name: syd # Def: SecY interacting protein Syd # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 181 1 181 181 367 100.0 1e-101 MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIISTTEDAVYWQPQPFTGEQ NVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQTWSEDDFRRVQENLIGHL VTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGTRKRTHLASNLAEFLNQLKPL L >gi|296918703|gb|GG772997.1| GENE 186 210494 - 210823 348 109 aa, chain + ## HITS:1 COG:ECs3652 KEGG:ns NR:ns ## COG: ECs3652 COG3098 # Protein_GI_number: 15832906 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 172 97.0 2e-43 MTTHDRVRLQLQALEALLREHQHWRNDEPLPHQFASTQPFFMDTMEPLEWLQWVLIPRMH DLLDNNQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS >gi|296918703|gb|GG772997.1| GENE 187 210823 - 211605 192 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 3 219 82 276 287 78 27 3e-13 MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDLIGQHVFTAHRLDRPTSGV LLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDK GPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSK HGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLL PENERVEFSAPSGQDGEISS >gi|296918703|gb|GG772997.1| GENE 188 211623 - 212072 560 149 aa, chain + ## HITS:1 COG:ECs3650 KEGG:ns NR:ns ## COG: ECs3650 COG0716 # Protein_GI_number: 15832904 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 149 1 149 149 292 98.0 1e-79 MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTG QGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVG EMLLIDASENPEPETESNPWVEHWGTMLS >gi|296918703|gb|GG772997.1| GENE 189 212506 - 213858 1533 450 aa, chain + ## HITS:1 COG:ygcZ KEGG:ns NR:ns ## COG: ygcZ COG0477 # Protein_GI_number: 16130696 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 450 1 450 450 817 99.0 0 MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYV FSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTL RFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWS HVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQKELEYIAAGGALINMDQQNTKVKVPFSV KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVC GFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAF FGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIY VGVHALIAVLSYLVLVGDIKRIELKPVAGQ >gi|296918703|gb|GG772997.1| GENE 190 213860 - 215200 1474 446 aa, chain + ## HITS:1 COG:ygcY KEGG:ns NR:ns ## COG: ygcY COG4948 # Protein_GI_number: 16130695 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 446 1 446 446 893 98.0 0 MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGGEVI YQTLVKAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFDKGAWTFELRVNAVAALEAALL DLLGQALNVPVCELLGPGKQRDAITVLGYLFYIGDRTKTDLPYLENTPGNHEWYQLRHQK AMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRFPDARITVDPNGAWL LDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHA VMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGN PTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVPDAPGLGVELDWEQVQKAHEAYKRLPGGA RNDAGPMQYLIPGWTFDRKRPVFGRH >gi|296918703|gb|GG772997.1| GENE 191 215221 - 216561 1671 446 aa, chain + ## HITS:1 COG:ECs3647 KEGG:ns NR:ns ## COG: ECs3647 COG4948 # Protein_GI_number: 15832901 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli O157:H7 # 1 446 1 446 446 923 99.0 0 MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEK IRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAM LDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDDSCDWYRLRHE EAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAW SLKEAIKIGTYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGH TLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPG KITAIDTHWIWQEGNQRLTKEPLEIKGGLVQVPEKPGLGVEIDMDQVMKAHELYQKHGLG ARDDAMGMQYLIPGWTFDNKRPCMVR >gi|296918703|gb|GG772997.1| GENE 192 216830 - 219586 2563 918 aa, chain - ## HITS:1 COG:ECs3646_1 KEGG:ns NR:ns ## COG: ECs3646_1 COG0642 # Protein_GI_number: 15832900 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 531 1 531 531 1030 99.0 0 MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGM SLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQL TVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFIS SVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGI NSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANM SHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLI LESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNA IKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHG GTGLGLVITQKLVNEMGGDISFHSLPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLA YVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLA KAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPV TDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQ MPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL LLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEV RNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELL ELLDEMDNVAREASKILG >gi|296918703|gb|GG772997.1| GENE 193 219643 - 220944 893 433 aa, chain + ## HITS:1 COG:ygcA KEGG:ns NR:ns ## COG: ygcA COG2265 # Protein_GI_number: 16130692 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 433 1 433 433 869 98.0 0 MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQ YARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVI ADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACL GSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLECFSHSEGLDLYLAPDSEILE TVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVEPEDCVLDLFCGMGNF TLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKV LLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHT GHLESMVLFSRVK >gi|296918703|gb|GG772997.1| GENE 194 220992 - 223226 2297 744 aa, chain + ## HITS:1 COG:ECs3644 KEGG:ns NR:ns ## COG: ECs3644 COG0317 # Protein_GI_number: 15832898 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Escherichia coli O157:H7 # 1 744 1 744 744 1509 100.0 0 MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGV EMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLK ATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTN IYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEM KAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEG AAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPA GSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNL GYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVD ELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVE GVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGES YSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQ VLGRVLGKLNQVPDVIDARRLHGS >gi|296918703|gb|GG772997.1| GENE 195 223304 - 223552 273 82 aa, chain + ## HITS:1 COG:ECs3643 KEGG:ns NR:ns ## COG: ECs3643 COG2336 # Protein_GI_number: 15832897 # Func_class: T Signal transduction mechanisms # Function: Growth regulator # Organism: Escherichia coli O157:H7 # 1 82 1 82 82 148 100.0 2e-36 MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVN DITPENLHENIDWGEPKDKEVW >gi|296918703|gb|GG772997.1| GENE 196 223552 - 223887 269 111 aa, chain + ## HITS:1 COG:ECs3642 KEGG:ns NR:ns ## COG: ECs3642 COG2337 # Protein_GI_number: 15832896 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 228 99.0 2e-60 MVSRYVPDTGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPF EVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG >gi|296918703|gb|GG772997.1| GENE 197 223959 - 224750 1061 263 aa, chain + ## HITS:1 COG:ECs3641 KEGG:ns NR:ns ## COG: ECs3641 COG1694 # Protein_GI_number: 15832895 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 478 100.0 1e-135 MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELG DLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKT EERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEA RQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLE MTGVDLETMEEVWQQVKRQEIDL >gi|296918703|gb|GG772997.1| GENE 198 224978 - 226615 1656 545 aa, chain + ## HITS:1 COG:ECs3640 KEGG:ns NR:ns ## COG: ECs3640 COG0504 # Protein_GI_number: 15832894 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Escherichia coli O157:H7 # 1 545 1 545 545 1101 100.0 0 MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEV FVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHIT NAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYM AASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKD VDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIE LPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEG MITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWR DENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQ IEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQ KRQAK >gi|296918703|gb|GG772997.1| GENE 199 226703 - 228001 1605 432 aa, chain + ## HITS:1 COG:ECs3639 KEGG:ns NR:ns ## COG: ECs3639 COG0148 # Protein_GI_number: 15832893 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 760 100.0 0 MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFL GKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAK AAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVK EAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKD ITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDG FAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAK DAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKA PYNGRKEIKGQA >gi|296918703|gb|GG772997.1| GENE 200 228084 - 228950 418 288 aa, chain - ## HITS:1 COG:Z4093 KEGG:ns NR:ns ## COG: Z4093 COG1512 # Protein_GI_number: 15803299 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Escherichia coli O157:H7 EDL933 # 1 256 10 265 301 509 98.0 1e-144 MWCLPGLAQQIAVPELRQQVTDITGTLSTSEQQSLTQQLQDITHKTRAQVAVLVVPSTGD DSIEQYATRVFDSWKLGDKQRNDGILLLVAWEDHAVRIEVGYGLEGVVTDLQAAKIIRDI LIPAFKSDDLMGGLTLASENIGALLLNGELPEDRGDYYSINPPIPLSLAVIILLAVLSYF IVFTDPSNLPWITLTGAIYGMVFLYVAEPGPWTNLIVACGMLTPFAIVPLVVFWLIVNKK LRAKYKKLSKERASRKGSSSSSSGGGSSGGGFSGGGGSSGGGGASGRW >gi|296918703|gb|GG772997.1| GENE 201 229347 - 230138 305 263 aa, chain - ## HITS:1 COG:ECs3637 KEGG:ns NR:ns ## COG: ECs3637 COG1512 # Protein_GI_number: 15832891 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Escherichia coli O157:H7 # 1 252 1 252 382 455 93.0 1e-128 MRIFLLLLMLCGFQVFAERLPSVTDLTGTLTTEEQSALNQQLQTLEQQNHFQVAVLVTPT TGGKNIKLAASQRYGVYHWKPVGEKRYGEGILILVVWPEGLASMKIGHGLEQMLPPEQAA QIVRYHMQPEFEKNNLFAGLTGGIESIAQFTHIKANLSPLDALANHLFANPQLSLPCLAW TVLMIVAIIVLWRFTSRPGPGIWMISMITPTVWFFCFQDDVIIRRVSVVCFSLFFAAICW QRLAVVFNMCRVPRISYDAGPKK >gi|296918703|gb|GG772997.1| GENE 202 230153 - 231046 294 297 aa, chain - ## HITS:1 COG:ECs3635 KEGG:ns NR:ns ## COG: ECs3635 COG1512 # Protein_GI_number: 15832889 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Escherichia coli O157:H7 # 1 224 1 224 224 435 96.0 1e-122 MRNFIFLMAFFCSSVFATQIPVPESPRYVNDLTGTLTNSEVNTLTNQIKALTQKNHAQLV VLVVDTTGDETIEQYATRVFDSWKPGDKDRDDGVLLLVAWQDHTVRIEIGYGLEGIITDA QSGKIIRNSIIPAFKKGDLAGGLQKGINDIESRLTGNNSATITPTDHPLSFSGWWALLVW AIILTFISARGYIKTLGVICFAAIVLAFVLPIAGFSGSWGVLTTLLCFATPFLAVAIAFT PFGKKVRDSMRDANQPSRHTRSNSSSHYSSSSSSSFDNDNFSGGGGSSGGGGASGRW >gi|296918703|gb|GG772997.1| GENE 203 231060 - 231668 519 202 aa, chain - ## HITS:1 COG:Z4090 KEGG:ns NR:ns ## COG: Z4090 COG1704 # Protein_GI_number: 15803296 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 37 202 1 164 164 264 91.0 1e-70 MFRIFIAFIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRTDLIPNLVASIKGYSSH EQEVLEAVTLARSQANRASSDLQKTPGDEQKLQAWQQAQAQAQVTRTLGQLTIISERYPQ LKAQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYL PDDVTAVSKAPTIDFSQNANAH >gi|296918703|gb|GG772997.1| GENE 204 231841 - 232512 214 223 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel] # 5 222 20 224 225 87 30 8e-16 MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAK TKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETS GTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTD DKPRVIALQPISQKEDATRLCIDTCIARNWRLSMQTHKYLNIA >gi|296918703|gb|GG772997.1| GENE 205 232986 - 234464 1403 492 aa, chain - ## HITS:1 COG:ygcE KEGG:ns NR:ns ## COG: ygcE COG1070 # Protein_GI_number: 16130683 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 492 1 492 492 1017 97.0 0 MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFA GHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVA YVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKTWAWSEDAAVMEKFNIPRQMLFDVQMP GTILGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGK ALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLL NKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNN YDNMCHEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGL GLYPDYATAVDKMVRVKDIFMPVENNAKRYDAMNKGIFKELTKHTDVILKKSYEVMHGEL GNADSIQSWSNA >gi|296918703|gb|GG772997.1| GENE 206 234491 - 235618 1126 375 aa, chain - ## HITS:1 COG:yqcE KEGG:ns NR:ns ## COG: yqcE COG0477 # Protein_GI_number: 16130682 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 375 51 425 425 647 97.0 0 MSTFGIAAIIFYAPSGVIADKFSHRKMITSAMIITGLLGLIMATYPPLWVMLCIQVAFAI TTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASL KTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVI FGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPT RVVQILSIIGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSY IMGTTVGICSVIGFLPDVFVYPIIGYWQDTLPAAEAYRNMWLMGMAALGMVIIFTFLLFQ KIRTADSAPAMASSK >gi|296918703|gb|GG772997.1| GENE 207 236114 - 236899 177 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 16 256 1 238 242 72 26 1e-11 MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANVFIPSFVKDNGETKEM IEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDP MIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAY CDELGQYNIQVNGISPGYYATDITLATRSNPETNQRVLDYIPANRWGDTQDLMGAAVFLA SPASNYVNGHLLVVDGGYLVR >gi|296918703|gb|GG772997.1| GENE 208 236969 - 238423 1588 484 aa, chain + ## HITS:1 COG:ECs3629 KEGG:ns NR:ns ## COG: ECs3629 COG0277 # Protein_GI_number: 15832883 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli O157:H7 # 1 484 1 484 484 1011 99.0 0 MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGST EQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATA QCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEA VLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYVLED MKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEG IAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIH EIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNP LNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIY PIEK >gi|296918703|gb|GG772997.1| GENE 209 238517 - 239854 985 445 aa, chain + ## HITS:1 COG:Z4083m KEGG:ns NR:ns ## COG: Z4083m COG0477 # Protein_GI_number: 15804979 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 445 25 469 469 737 97.0 0 MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIG GSALLGLFLGSLVLGWISDHIGRQKIFTFSFMLITLASFLQFFATTPEHLIGLRILIGIG LGGDYSVGHTLLAEFSPRRHRGVLLGAFSVVWTVGYVLASIAGHHFISESPEAWRWLLAS AALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVATATHKHIKTL FSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLG LVLTHLLAHRRFLLGSFLLLTATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPA ESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQATLLLLAAVLLVGFVVTWLW APETKALPLVAAGNAGGANEHTVSV >gi|296918703|gb|GG772997.1| GENE 210 239832 - 240611 575 259 aa, chain + ## HITS:1 COG:ECs3626 KEGG:ns NR:ns ## COG: ECs3626 COG2086 # Protein_GI_number: 15832880 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli O157:H7 # 1 259 3 261 261 437 93.0 1e-123 MNILLAFKAEPDAGMLAEKEWLAAAQGNIGPDVSLLRSLLGADEQAAAALLLAQRKNGTP MSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVALHIAEWQYQNPLDLI ITGCQSSEGQNGQTPFLLAEMLVWPCFTQVERFTLDAPFITLEQRTEHGVRCCRVRLPAV IAVRQCGEVALPVPGMRQRMAAGKAEITRETVAAEAPAIQCLQLARPEQRRRAALIDGQT VAEKAQKLWQDYLRQRMQP >gi|296918703|gb|GG772997.1| GENE 211 240608 - 241468 708 286 aa, chain + ## HITS:1 COG:ygcQ KEGG:ns NR:ns ## COG: ygcQ COG2025 # Protein_GI_number: 16130676 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli K12 # 1 286 12 297 297 518 95.0 1e-147 MNIAIVTINQEHAAMAGWLAAQDFSGSTLTHWQIEPQPMVAEQVLDALVEQWQRTPAEVV LFPPGAFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLS LARQAGADKNATLPSGMQQLNIVPGALPDWLISVENLKNVTRDPLAEARRVLVVGQGGEA DNQEIAMLAEKMGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG VRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ >gi|296918703|gb|GG772997.1| GENE 212 241616 - 242191 476 191 aa, chain - ## HITS:1 COG:ygcP KEGG:ns NR:ns ## COG: ygcP COG1954 # Protein_GI_number: 16130675 # Func_class: K Transcription # Function: Glycerol-3-phosphate responsive antiterminator (mRNA-binding) # Organism: Escherichia coli K12 # 1 191 1 191 191 377 100.0 1e-105 MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIH VDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNID KQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTN TGVWTLAKKLL >gi|296918703|gb|GG772997.1| GENE 213 242208 - 242468 132 86 aa, chain - ## HITS:1 COG:ECs3622 KEGG:ns NR:ns ## COG: ECs3622 COG2440 # Protein_GI_number: 15832876 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Escherichia coli O157:H7 # 1 86 13 98 98 171 95.0 3e-43 MSVARNLWRAADAPHIVPADSVERQTAQRLINACPAGLFSLTPEGGLRVDYHGCLECGTC RLLCDESTLQQWRYPPSGFGITYRFG >gi|296918703|gb|GG772997.1| GENE 214 242459 - 243730 677 423 aa, chain - ## HITS:1 COG:ECs3621 KEGG:ns NR:ns ## COG: ECs3621 COG0644 # Protein_GI_number: 15832875 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli O157:H7 # 1 423 11 433 433 803 96.0 0 MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQ FHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECI PGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIK EVLTLEPSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQ SRVPASELLARFKTHPAVRPLIKNTESLEYGAHLVPEGGLRSMPVQYAGNGWLLVGDALR SCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQH VPALLQRPGWYRVWSGLMQDISRDLWDQGNTPVPPLRQLLWRHLRRHGLWHLTGDVIKSL RCL >gi|296918703|gb|GG772997.1| GENE 215 243808 - 244170 434 120 aa, chain - ## HITS:1 COG:ECs3620 KEGG:ns NR:ns ## COG: ECs3620 COG0720 # Protein_GI_number: 15832874 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Escherichia coli O157:H7 # 1 120 2 121 121 251 99.0 3e-67 MSTTLFKDFTFEAAHRLPHVPQGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAA FKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE >gi|296918703|gb|GG772997.1| GENE 216 244489 - 246288 1814 599 aa, chain + ## HITS:1 COG:cysJ KEGG:ns NR:ns ## COG: cysJ COG0369 # Protein_GI_number: 16130671 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Escherichia coli K12 # 1 599 1 599 599 1150 98.0 0 MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAE MPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQG EGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERL LDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLAAS LSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDE PVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPI VDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGG ASSFLADRVEEEGEVRVFIEHNDNFRLPTNPETPVIMIGPGTGIAPFRAFMQQRAADEAP GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKIYVQDKLREQGAELW RWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY >gi|296918703|gb|GG772997.1| GENE 217 246288 - 248000 1936 570 aa, chain + ## HITS:1 COG:ECs3618 KEGG:ns NR:ns ## COG: ECs3618 COG0155 # Protein_GI_number: 15832872 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Escherichia coli O157:H7 # 1 570 1 570 570 1184 99.0 0 MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQ DDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTF QFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEH LLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAI AENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRT DRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTL FIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGL MNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCP NGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAK EREVGEGFGDFTVRAGIIRPVLDPARDLWD >gi|296918703|gb|GG772997.1| GENE 218 248074 - 248808 913 244 aa, chain + ## HITS:1 COG:cysH KEGG:ns NR:ns ## COG: cysH COG0175 # Protein_GI_number: 16130669 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Escherichia coli K12 # 1 244 1 244 244 491 99.0 1e-139 MSKLDLNALNELPKVDRILALAETNAQLEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAV SLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKL WEQGVEGIEKYNDINKVEPMNRALKELNVQTWFAGLRREQSGSRANLPVLAIQRGVFKVL PIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECG LHEG >gi|296918703|gb|GG772997.1| GENE 219 249073 - 249225 162 50 aa, chain + ## HITS:1 COG:no KEGG:G2583_3410 NR:ns ## KEGG: G2583_3410 # Name: small # Def: small toxic membrane polypeptide # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 50 46 95 95 95 100.0 9e-19 MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK >gi|296918703|gb|GG772997.1| GENE 220 249350 - 250387 557 345 aa, chain - ## HITS:1 COG:iap KEGG:ns NR:ns ## COG: iap COG2234 # Protein_GI_number: 16130660 # Func_class: R General function prediction only # Function: Predicted aminopeptidases # Organism: Escherichia coli K12 # 1 345 1 345 345 692 98.0 0 MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADY IRQQFQQMGYRSDVRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDT YAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAEHLKNTPTEYGIRFVATSGEEEGKL GAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVNTPEAVRKLTRDRALAIARSHG IAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPA GNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS >gi|296918703|gb|GG772997.1| GENE 221 250639 - 251547 1076 302 aa, chain + ## HITS:1 COG:cysD KEGG:ns NR:ns ## COG: cysD COG0175 # Protein_GI_number: 16130659 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Escherichia coli K12 # 1 302 1 302 302 619 99.0 1e-177 MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPL LHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLK QALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGES IRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRINLQSGEVIK KRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQG YF >gi|296918703|gb|GG772997.1| GENE 222 251549 - 252976 1645 475 aa, chain + ## HITS:1 COG:cysN KEGG:ns NR:ns ## COG: cysN COG2895 # Protein_GI_number: 16130658 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Escherichia coli K12 # 1 475 1 475 475 946 99.0 0 MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLS SLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQY TRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETF TRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRV VDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDRE EAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIA GKKTRARVDGIHYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIF IDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK >gi|296918703|gb|GG772997.1| GENE 223 252976 - 253581 660 201 aa, chain + ## HITS:1 COG:ECs3604 KEGG:ns NR:ns ## COG: ECs3604 COG0529 # Protein_GI_number: 15832858 # Func_class: P Inorganic ion transport and metabolism # Function: Adenylylsulfate kinase and related kinases # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 394 99.0 1e-110 MALHDENVVWHSHPVTPQQREQHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTY LLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRE RVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQ LVTNLVQQLLDLLRQNDIIRS >gi|296918703|gb|GG772997.1| GENE 224 253631 - 253954 407 107 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3020 NR:ns ## KEGG: ECS88_3020 # Name: ygbE # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 107 1 107 107 178 100.0 6e-44 MRNSHNITLTNNDSLTEVEDTTWSLPGAVVGFLSWLCALAIPMLIYGSNTLLFFIYTWPF FLALMPVAVVVGIALHSLMDGKLRYSIVFTLATVGIMFGALFMWLLG >gi|296918703|gb|GG772997.1| GENE 225 254147 - 254458 191 103 aa, chain + ## HITS:1 COG:ECs3602 KEGG:ns NR:ns ## COG: ECs3602 COG2919 # Protein_GI_number: 15832856 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Escherichia coli O157:H7 # 16 103 16 103 103 162 98.0 2e-40 MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNNDVAAQQATNAKLKARNDQLFAEIDDL NGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR >gi|296918703|gb|GG772997.1| GENE 226 254477 - 255187 317 236 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 10 227 6 223 234 126 37 9e-28 MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISP GDSRFAQLPLANHPRITVVDGGEERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARL LALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTR ALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT >gi|296918703|gb|GG772997.1| GENE 227 255187 - 255666 780 159 aa, chain + ## HITS:1 COG:ECs3600 KEGG:ns NR:ns ## COG: ECs3600 COG0245 # Protein_GI_number: 15832854 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 284 98.0 5e-77 MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL FPDTDPTFKGADSRELLREAWRRIQAKGYALGNVDVTIIAQAPRMLPHIPQMRVFIAEDL GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK >gi|296918703|gb|GG772997.1| GENE 228 255663 - 256712 1071 349 aa, chain + ## HITS:1 COG:ECs3599 KEGG:ns NR:ns ## COG: ECs3599 COG0585 # Protein_GI_number: 15832853 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 691 98.0 0 MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRK LRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQ TNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEE LAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAEETELQTLLVREKVEAARRA MLLYPQQLSWNWWDDVTVEIHFWLPAGSFATSVVRELINTTGDYAHIAE >gi|296918703|gb|GG772997.1| GENE 229 256693 - 257454 674 253 aa, chain + ## HITS:1 COG:ECs3598 KEGG:ns NR:ns ## COG: ECs3598 COG0496 # Protein_GI_number: 15832852 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 505 100.0 1e-143 MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGD IAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA LAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRH PADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV SDWLNSVGVGTQW >gi|296918703|gb|GG772997.1| GENE 230 257448 - 258074 508 208 aa, chain + ## HITS:1 COG:ECs3597 KEGG:ns NR:ns ## COG: ECs3597 COG2518 # Protein_GI_number: 15832851 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-L-isoaspartate carboxylmethyltransferase # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 396 99.0 1e-110 MVSRRVQALLDQLRAQGIQDELVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQ PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNL DLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEEHQYLK RVRRRGGEFIIDTVEAVRFVPLVKGELA >gi|296918703|gb|GG772997.1| GENE 231 258214 - 259353 649 379 aa, chain + ## HITS:1 COG:nlpD KEGG:ns NR:ns ## COG: nlpD COG0739 # Protein_GI_number: 16130649 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli K12 # 1 379 1 379 379 553 100.0 1e-157 MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAPANTNSGMLITPPPKMG TTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSYSG STYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGGNAIT QADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPTATTVTAPVTVPT ASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAIIATADGRV VYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSSTRLH FEIRYKGKSVNPLRYLPQR >gi|296918703|gb|GG772997.1| GENE 232 259416 - 260408 1100 330 aa, chain + ## HITS:1 COG:ECs3595 KEGG:ns NR:ns ## COG: ECs3595 COG0568 # Protein_GI_number: 15832849 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 576 100.0 1e-164 MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE RVRQIQVEGLRRLREILQTQGLNIEALFRE >gi|296918703|gb|GG772997.1| GENE 233 260586 - 261137 538 183 aa, chain - ## HITS:1 COG:AGl1309 KEGG:ns NR:ns ## COG: AGl1309 COG0655 # Protein_GI_number: 15890781 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 183 8 188 193 189 62.0 2e-48 MQNIAVVYYSGYGHTKLVAEKVAQGAHADLISIDNEGNITEQEWEKLDAADAIIFGAPTY MGGAPWQFKKFADASSKAWFTRKWQDKVFGGFTNSASLNGDKQVTLIYLQTLASQHGGLW VSLGQAPANVLASTREDVNNLGGSVGLLVQSPADAGADQIPTGDLDTAVKYGERVATITA RLK >gi|296918703|gb|GG772997.1| GENE 234 261362 - 262405 615 347 aa, chain + ## HITS:1 COG:VC1562 KEGG:ns NR:ns ## COG: VC1562 COG0491 # Protein_GI_number: 15641570 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Vibrio cholerae # 38 332 64 375 390 145 30.0 1e-34 MQGIKIYTILASSLISGSVFAQTEISTANSSTVNASYVEPSAEKIISPSDKLNNLFERNM SQPYILQKIGERTYYVQRYFYSTTFYVGDKGVLLFDAPEGRGKYLLQAIRDVTPLPVTAL VYSHYHVDHIGDSPFWNDEAKKEGVNLRIIASKATAEKMQFMNSRLPVATQVLSKKDDQF KFEKQTIELHRFVKAGHTDDHSVWLLKQEKVAHSPDLLNPDQLPMMGFAVSDTLVYHDSN LRQVEMLDWKYFIGGHGNIGSHDDFKFQRQFLNDLRDTTIKVRKEESFGKFMNKTANNHA DFARAQREAIIKKVTEVLRPKYGHMYGYDASMPANIEMAIRLVGSYY >gi|296918703|gb|GG772997.1| GENE 235 262548 - 263912 1183 454 aa, chain - ## HITS:1 COG:ygbN KEGG:ns NR:ns ## COG: ygbN COG2610 # Protein_GI_number: 16130647 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 454 1 454 454 685 99.0 0 MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGG VLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDV GFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPHPGPVAAAGLLHADIGWLTI IGIAISIPVGVVGYFAAKIINKRQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALV TSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSL QHTSDIMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISL ALRASQGSATVAILTTSGLLSEAVMGLNPIQCVLVTLAACFGGLGASHINDSGFWIVTKY LGLSVADGLKTWTVLTTILGFTGFLITWCVWLVI >gi|296918703|gb|GG772997.1| GENE 236 264001 - 264777 703 258 aa, chain - ## HITS:1 COG:ygbM KEGG:ns NR:ns ## COG: ygbM COG3622 # Protein_GI_number: 16130646 # Func_class: G Carbohydrate transport and metabolism # Function: Hydroxypyruvate isomerase # Organism: Escherichia coli K12 # 1 258 1 258 258 522 98.0 1e-148 MPRFAANLSMMFTEVPFIERFAAARKAGFDAVEFLFPYDYSPLQIQKQLEQNHLTLALFN TAPGDINAGEWGLSALPGREHEARADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRA VFIDNLRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEVARDNVFIQLDTF HAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGEINYPWLFRLFDEVGYQGWIGCE YKPRGLTEEGLGWFDAWR >gi|296918703|gb|GG772997.1| GENE 237 264782 - 265420 407 212 aa, chain - ## HITS:1 COG:ygbL KEGG:ns NR:ns ## COG: ygbL COG0235 # Protein_GI_number: 16130645 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 212 1 212 212 426 98.0 1e-119 MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQR LSKVTADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCQEGLDSNNVIR PFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANN MEELEETAKLIFILGDRPIRYLTAGEIAELRS >gi|296918703|gb|GG772997.1| GENE 238 265417 - 266679 1073 420 aa, chain - ## HITS:1 COG:ygbK KEGG:ns NR:ns ## COG: ygbK COG3395 # Protein_GI_number: 16130644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 385 1 385 388 732 98.0 0 MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAIDALVISLKTRSCPVVEA TQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVFSPALPVN GRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVESQSTGRCGVVSAHVFEQGVKA VRQELARLQQEGYRYAVLDALTEHHLEIQGKALRDAPLVTGGSGLAIGLARQWAQENGNQ AREAGRPLAGRGVVLSGSCSQMTNRQVAHYRQIAPAREVDVARCLSTETLAAYAHELAEW VLGQESVLAPLVFATASTDALAAIQQQYGAQKASQAVETLFSQLAARLAAEGVTRFIVAG GETSGVVTQSLGIKGFHIGPTISPGVPWVNALDKPVSLALKSGNFGDEAFFSRAQREFLS >gi|296918703|gb|GG772997.1| GENE 239 266676 - 267584 975 302 aa, chain - ## HITS:1 COG:ygbJ KEGG:ns NR:ns ## COG: ygbJ COG2084 # Protein_GI_number: 16130643 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli K12 # 1 302 1 302 302 488 98.0 1e-138 MKTGSEFHVGIVGLGSMGMGAALSCVRAGLSTWGADLNSNACATLKEAGACGVSDNAATF AEKLDALLVLVVNATQVKQVLFGEKGVAQHLKPGTAVMVSSTIASADAQEIATALAGFGL EMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKII HQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSA VDIFVKDLGLVADTAKALHFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGITLPGA KS >gi|296918703|gb|GG772997.1| GENE 240 267780 - 268547 618 255 aa, chain + ## HITS:1 COG:ygbI KEGG:ns NR:ns ## COG: ygbI COG1349 # Protein_GI_number: 16130642 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 255 11 265 265 458 98.0 1e-129 MIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGGVQSPG RVAHEPSHQVKTALAMTQKAAIGKLAASLVQPGRCIYLDAGTTTLAIAQHLIHMEPLTVV TNDFVIADYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRG ISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASR ALAKLDLSLLVAKNE >gi|296918703|gb|GG772997.1| GENE 241 268598 - 269254 412 218 aa, chain - ## HITS:1 COG:ECs3590 KEGG:ns NR:ns ## COG: ECs3590 COG0639 # Protein_GI_number: 15832844 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Escherichia coli O157:H7 # 1 218 1 218 218 421 93.0 1e-118 MPSTRYQKINAHHYRHIWTVGDIHGDYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL NVLRLLNQPWFISVKGNHEAMALDAFETGDGNMWLASGGDWFFDLNDSEQQEAIDLLLKF HHLPHIIEITNDTIKYVIAHADYPGKEYQFGKEIAENELLWPVDRVQKSLNSELQKINGA DFFIFGHMMFDNIQTFANQIYIDTGSPKSGRLSFYKIK >gi|296918703|gb|GG772997.1| GENE 242 269360 - 271921 3091 853 aa, chain - ## HITS:1 COG:ECs3589 KEGG:ns NR:ns ## COG: ECs3589 COG0249 # Protein_GI_number: 15832843 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Escherichia coli O157:H7 # 1 853 1 853 853 1610 99.0 0 MSTIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGA SAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTIS DEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLY AEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCL LQYAKDTQRTTLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVT PMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTAELQPVLRQVGDLERILARLALRTA RPRDLARMRHAFQQLPELRAQLENVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLVR DGGVIATGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISRG QSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLE ALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANP LNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAA DDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIK ALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAG VPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPR QALEWIYRLKSLV >gi|296918703|gb|GG772997.1| GENE 243 272207 - 272551 289 114 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2998 NR:ns ## KEGG: ECS88_2998 # Name: ygbA # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 114 1 114 114 196 100.0 2e-49 MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFAYAQKRLDKCVFGEEKPACKQC PVHCYQPAKREEMKQIMRWVGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKK >gi|296918703|gb|GG772997.1| GENE 244 272590 - 273018 490 142 aa, chain - ## HITS:1 COG:RSp1153 KEGG:ns NR:ns ## COG: RSp1153 COG2005 # Protein_GI_number: 17549374 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Ralstonia solanacearum # 1 139 123 267 269 82 41.0 2e-16 MAVSARNQLTGTVSAVAMGAVNDEVELTLAGGAKLVAIVTHSSQQALGLAKGKEAIALIK APWVTLATEDCGLKFSARNQFAGSVSTITEGAVNATVHIKTDAGFEIVAVVTNESQDEMK LTTGSRVIALIKASAILIATKA >gi|296918703|gb|GG772997.1| GENE 245 273063 - 275126 2134 687 aa, chain - ## HITS:1 COG:ECs3587 KEGG:ns NR:ns ## COG: ECs3587 COG3604 # Protein_GI_number: 15832841 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli O157:H7 # 1 687 6 692 692 1360 99.0 0 MSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALADNAAIVLWQAQTQRASYYASR EKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFCETWPQLATGGLYPKFGHYCLMPL AAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIVSVVTEQIQSRVVNNVDYELLCRERD NFRILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDK QHPAHEQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFNTWGNQIQTLCLLPL MSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERLVDENL ALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNL SGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDM PLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVF PIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRILSNMEWPGNVRELENVI ERAVLLTRGNVLQLSLPDIALPEPETPPAATVVAQEGEDEYQLIVRVLKETNGVVAGPKG AAQRLGLKRTTLLSRMKRLGIDKSALI >gi|296918703|gb|GG772997.1| GENE 246 275215 - 276225 1161 336 aa, chain - ## HITS:1 COG:hypE KEGG:ns NR:ns ## COG: hypE COG0309 # Protein_GI_number: 16130637 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 15 336 1 322 322 608 99.0 1e-174 MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSY VIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETA RAAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSGTLGDHG ATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGC GIELSEAALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDA ALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC >gi|296918703|gb|GG772997.1| GENE 247 276222 - 277343 944 373 aa, chain - ## HITS:1 COG:hypD KEGG:ns NR:ns ## COG: hypD COG0409 # Protein_GI_number: 16130636 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 373 1 373 373 776 99.0 0 MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPEN VEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVR IVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIP TLRSLLEEPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLV EQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQ RFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGAC AAWYQYRQQESEA >gi|296918703|gb|GG772997.1| GENE 248 277343 - 277615 321 90 aa, chain - ## HITS:1 COG:ECs3584 KEGG:ns NR:ns ## COG: ECs3584 COG0298 # Protein_GI_number: 15832838 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 174 100.0 3e-44 MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVIN EAEARDTLDALQNMFDVEPDVGALLYGEEK >gi|296918703|gb|GG772997.1| GENE 249 277606 - 278478 897 290 aa, chain - ## HITS:1 COG:hypB KEGG:ns NR:ns ## COG: hypB COG0378 # Protein_GI_number: 16130634 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Escherichia coli K12 # 1 290 1 290 290 595 99.0 1e-170 MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIKAPEFTPSQTEEGDLHY GHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRAHFAARKQLVLNLVSSPGSGKTTL LTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRL PLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKV DLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQRCA >gi|296918703|gb|GG772997.1| GENE 250 278482 - 278832 215 116 aa, chain - ## HITS:1 COG:ECs3582 KEGG:ns NR:ns ## COG: ECs3582 COG0375 # Protein_GI_number: 15832836 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Escherichia coli O157:H7 # 1 116 1 116 116 202 100.0 1e-52 MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSLAFCFDLVCRGSVAEGC KLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVADDGLQIRRIEIDQE >gi|296918703|gb|GG772997.1| GENE 251 279044 - 279505 446 153 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2990 NR:ns ## KEGG: ECS88_2990 # Name: hycA # Def: formate hydrogenlyase regulatory protein HycA # Organism: E.coli_S88 # Pathway: not_defined # 1 153 1 153 153 308 100.0 4e-83 MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHHAMSCAPDKELCFVLFE HFRIYVTLADGFNSHTIEYYVETKEGEDKQRIAQAQLSIDGMIDGKVNIRDREQVLEHYL EKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA >gi|296918703|gb|GG772997.1| GENE 252 279630 - 280241 337 203 aa, chain + ## HITS:1 COG:hycB KEGG:ns NR:ns ## COG: hycB COG1142 # Protein_GI_number: 16130631 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli K12 # 1 203 1 203 203 357 99.0 8e-99 MNRFVIADSTLCIGCHTCEATCSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCA TVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAP PAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKR ELTFNTDFGDLTLFQQAQSGEAK >gi|296918703|gb|GG772997.1| GENE 253 280238 - 282064 2165 608 aa, chain + ## HITS:1 COG:hycC KEGG:ns NR:ns ## COG: hycC COG0651 # Protein_GI_number: 16130630 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli K12 # 1 608 1 608 608 994 99.0 0 MSAISLINSGVAWFVAVAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGTVGV SGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHAQVKCNGLQINMLMAAAVC AVIASNLGMFVVMAEIMALCAVFLTSNSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLD LRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKI GLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIL LGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGG IGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGL AITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWLL PMLSAAVPLPLEPANTTVSQPMITLLLIACPLLPFIIMAICKGDRLPSRSRGAAWVCGYD HEKSMVITAHGFAMPVKQAFAPVLKLRKWLNPVSLVPGWQCEGSALLFRRMALVELAVLV VIIVSRGA >gi|296918703|gb|GG772997.1| GENE 254 282067 - 282990 1285 307 aa, chain + ## HITS:1 COG:hycD KEGG:ns NR:ns ## COG: hycD COG0650 # Protein_GI_number: 16130629 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 4 # Organism: Escherichia coli K12 # 1 307 1 307 307 530 99.0 1e-150 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPPLGDLITLLYLFAIARFFFAISGLDTGS PFTAIGASREAMLGVLVEPMLLLGLWVAAQAAGSTNISNITDTVYHWPLSQSIPLVLALC ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI PWGQMETFTVGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA FVSLLAA >gi|296918703|gb|GG772997.1| GENE 255 283008 - 284717 2270 569 aa, chain + ## HITS:1 COG:ECs3577_2 KEGG:ns NR:ns ## COG: ECs3577_2 COG3261 # Protein_GI_number: 15832831 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III large subunit # Organism: Escherichia coli O157:H7 # 158 569 1 412 412 872 100.0 0 MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGWLSVL FGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWGEREVRD MYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTTDAETYEFINELGDKKNN VVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRV CGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSG FMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELV DVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVH SEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTYIPHRFALGFAEAPRGD DIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTV VDVRKKKSKVVPYKELERYSIERKNSPLK >gi|296918703|gb|GG772997.1| GENE 256 284727 - 285269 489 180 aa, chain + ## HITS:1 COG:ECs3576 KEGG:ns NR:ns ## COG: ECs3576 COG1143 # Protein_GI_number: 15832830 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Escherichia coli O157:H7 # 1 180 1 180 180 344 98.0 5e-95 MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETD LATGELAWQFDLGRCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVC NRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKRQKCLVPSDRIELTRHMKEAI >gi|296918703|gb|GG772997.1| GENE 257 285269 - 286036 816 255 aa, chain + ## HITS:1 COG:ECs3575 KEGG:ns NR:ns ## COG: ECs3575 COG3260 # Protein_GI_number: 15832829 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III small subunit # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 529 99.0 1e-150 MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLS PLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGG IFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGEQDEQPA EILHGDMVQPLRVKVDREARRLAGYRYGRQIADDFLTQLGQGEEQVARWLEAENDPRLNE IVSHLNHVVEEARIR >gi|296918703|gb|GG772997.1| GENE 258 286033 - 286443 504 136 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2983 NR:ns ## KEGG: ECS88_2983 # Name: hycH # Def: protein required for maturation of hydrogenase 3 # Organism: E.coli_S88 # Pathway: not_defined # 1 136 1 136 136 272 100.0 3e-72 MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDCLEAALTCPWDDYLAWI ATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAAQTSQQKEWSTMLLSMLHD IHQENAIYLMVRRLRD >gi|296918703|gb|GG772997.1| GENE 259 286469 - 286906 575 145 aa, chain + ## HITS:1 COG:ECs3573 KEGG:ns NR:ns ## COG: ECs3573 COG0680 # Protein_GI_number: 15832827 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 145 12 156 156 281 99.0 3e-76 MMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPENDIVAIRELRPTRLLIVDATDMGLNPG EIRIIDPADIAEMFMMTTHNMPLNYLIDQLKEDIGEVIFLGIQPDIVGFYYPMTQPIKDA VETVYQRLEGWEGNGGFAQLAVEEE >gi|296918703|gb|GG772997.1| GENE 260 286949 - 287116 61 55 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2982 NR:ns ## KEGG: EC55989_2982 # Name: not_defined # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_55989 # Pathway: not_defined # 1 55 7 61 257 112 92.0 7e-24 MCAFLLSLVLPAQATSFTEYLPMSDGEYAQKRVLKPLLTMPYDAEQTWHFRKVSV >gi|296918703|gb|GG772997.1| GENE 261 287142 - 287561 393 139 aa, chain + ## HITS:1 COG:ygjM KEGG:ns NR:ns ## COG: ygjM COG5499 # Protein_GI_number: 16130977 # Func_class: K Transcription # Function: Predicted transcription regulator containing HTH domain # Organism: Escherichia coli K12 # 6 139 5 137 138 124 46.0 4e-29 MTANAARAVKATRELVNAVPFLGGSDSEDDYREALELVEYLIEEDDTNPLIDFLASRIAE YENNNEKFAEFDKAVAAMPVGVALLRTLIDQHNLTYADLKNEIGSKSLVSQILSGQRSLT ISHIKALSARFGVKPEWFL >gi|296918703|gb|GG772997.1| GENE 262 287659 - 289083 1477 474 aa, chain - ## HITS:1 COG:ascB KEGG:ns NR:ns ## COG: ascB COG2723 # Protein_GI_number: 16130623 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 474 1 474 474 983 97.0 0 MSVFPQGFLWGGALAANQSEGAYREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEF YPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRAVFEE CKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVELFSRYARTCFEAFDGLVKYWLTFNE INIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG NFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPAYSARVFREKGVTIDKAPSDDEILK NTVDFVSFSYYASRCASAEMNANNCSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMM YDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWG CIDLVSASTGEMSKRYGFVYVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDLE >gi|296918703|gb|GG772997.1| GENE 263 289092 - 290549 1642 485 aa, chain - ## HITS:1 COG:ECs3571_2 KEGG:ns NR:ns ## COG: ECs3571_2 COG1263 # Protein_GI_number: 15832825 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 91 485 2 396 396 638 97.0 0 MAKNYAALASSVITALGGVDNISAVTHCMTRLRFVIKDDQLIDSPTLKTISGVLGVVRSD NQCQVIIGNTVSQAFQEVVSLLPGDLQPAPPVGKPKLTLRRIGAGVLDALIGTMSPLIPA IIGGSMVKLLAMILEMSGVLTKGSPTLIILNVIGDGAFFFLPLMVAASAAIKFKTNMSLA IAIAGVLVHPSFIELMAKAALGEHVEFALIPVTAVKYTYTVIPALVMTWCLSYIERWVDS ITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGSAISALVYTIHGYLGWLSVAIMGAL WPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSEIGANLSLGGSSLAVAWKTKTPELRQT ALAAAASAIMAGISEPALYGVAIRLKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFT SVQFFDPANPMSIVWVFAVMALAVVLSFILTLLLGFEDIPVEEATAEARKHQSVQPTVAK EVSLN >gi|296918703|gb|GG772997.1| GENE 264 290828 - 291838 919 336 aa, chain + ## HITS:1 COG:ECs3570 KEGG:ns NR:ns ## COG: ECs3570 COG1609 # Protein_GI_number: 15832824 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 336 2 337 337 651 98.0 0 MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESGYRPNLLARNLSAKSTQ TLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDA IMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELITAGHQ EIAFLTGSMDSPTSIERLAGYKDALAQHGIAFNEKLIANGKWTPASGAEGVETLLERGAK FSALVASNDDMAIGAIKALHERGVAVPEQVSVIGFDDIAIAPYIVPALSSVKIPVTEMIQ EIIGRLIFMLDGGDFSPPKTFSGKLIRRGSLIALSR >gi|296918703|gb|GG772997.1| GENE 265 291987 - 292514 388 175 aa, chain + ## HITS:1 COG:ECs3569 KEGG:ns NR:ns ## COG: ECs3569 COG1142 # Protein_GI_number: 15832823 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli O157:H7 # 1 175 1 175 175 302 100.0 2e-82 MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQ CEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLN VRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF >gi|296918703|gb|GG772997.1| GENE 266 292667 - 294325 1336 552 aa, chain + ## HITS:1 COG:hypF KEGG:ns NR:ns ## COG: hypF COG0068 # Protein_GI_number: 16130619 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 550 1 550 750 1051 98.0 0 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLLEDPETFLVQ LHQHCPPLARIDSVEREPFIWSQLPTEFTIRQSAGGVMNTQIVPDAATCPACLAEMNTPG ERRWRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYCDPLDRRFHAQPVA CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLR ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA AACLAEHLWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECQHLGGLPAVALPGGD LAAKQPWRNLPS >gi|296918703|gb|GG772997.1| GENE 267 294367 - 294948 349 193 aa, chain + ## HITS:1 COG:hypF KEGG:ns NR:ns ## COG: hypF COG0068 # Protein_GI_number: 16130619 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 193 558 750 750 357 96.0 5e-99 MPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGE AACALEALAASCHGVTHPVTMPLVDNQLDLATFWQQWLSWQAPVNQRAWAFHDALAQGFA ALMREQATMRGITTLVFSGGVIHNCLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVI VAARWLAGEVQNG >gi|296918703|gb|GG772997.1| GENE 268 295172 - 296305 979 377 aa, chain - ## HITS:1 COG:ygbD KEGG:ns NR:ns ## COG: ygbD COG0446 # Protein_GI_number: 16130618 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 377 1 377 377 713 97.0 0 MSNGIVIIGSGFAARQLVKNIRKQDASIPLTLIAADSMDEYNKPDLSHVISQGQRADDLT RQTAGEFAEQFNLRLFPHTWVTDIDAEAHVVKSQNNQWQYDKLVLATGASAFVPPVPGRE LMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFCRAGKAVTLIDNAASILASL MPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILATLDRQRCIEVDAVIAATGLRPE TALARRAGLTINRGVCVDSYLQTSNADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNLL GNNTPLKLPAMLVKIKTPELPLHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVV SEDRMKEAFGLLKTLSM >gi|296918703|gb|GG772997.1| GENE 269 296302 - 297741 1354 479 aa, chain - ## HITS:1 COG:ygaK_1 KEGG:ns NR:ns ## COG: ygaK_1 COG0426 # Protein_GI_number: 16130617 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Escherichia coli K12 # 1 394 1 394 394 825 99.0 0 MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEKNVLIDTVDHKFSREFV QNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYCTANAIDSINGHHHHPEWN FNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDAVLFSNDAFGQHYCDEHLFND EVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNLPVDMIATSHGVVWRDNPTQIVE LYLKWAADYQEDRITIVYDTMSNNTRMMADAIAQGIAETDPRVAVKIFNVARSDKNEILT NVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSTRL QDAGFEMSLSLKAKWRPDQDALELCREHGREIARQWALAPLPQSTVNTVVEEETSAATTA DLGPRMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASEAK >gi|296918703|gb|GG772997.1| GENE 270 297928 - 299259 1131 443 aa, chain + ## HITS:1 COG:ECs3565 KEGG:ns NR:ns ## COG: ECs3565 COG3604 # Protein_GI_number: 15832819 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli O157:H7 # 1 443 26 468 529 819 99.0 0 MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLA KDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFA GQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGDAAPFE AVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLV YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRE RGDDVILLAGYFCEQCRLRLGLSRVVLSAGARNLLQHYNFPGNVRELEHAIHRAVVLSRA TRSGDEVILEAQHFAFPEVTLPP >gi|296918703|gb|GG772997.1| GENE 271 299304 - 299474 186 56 aa, chain + ## HITS:1 COG:ECs3565 KEGG:ns NR:ns ## COG: ECs3565 COG3604 # Protein_GI_number: 15832819 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli O157:H7 # 1 56 474 529 529 113 98.0 8e-26 MPVVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD >gi|296918703|gb|GG772997.1| GENE 272 299471 - 300436 1204 321 aa, chain - ## HITS:1 COG:gutQ_1 KEGG:ns NR:ns ## COG: gutQ_1 COG0794 # Protein_GI_number: 16130615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 14 205 1 192 192 361 99.0 1e-99 MSEALLNAGRQTLMLELQEASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL AMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQR LVKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVV DENGKLTGAINLQDFYQAGII >gi|296918703|gb|GG772997.1| GENE 273 300429 - 301202 767 257 aa, chain - ## HITS:1 COG:srlR KEGG:ns NR:ns ## COG: srlR COG1349 # Protein_GI_number: 16130614 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 257 1 257 257 503 99.0 1e-142 MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNK EESDPPIDHKTLINTHKKELIAEAAVGFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMT NSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNA GVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQ ALEEKGIDVIITGESNE >gi|296918703|gb|GG772997.1| GENE 274 301269 - 301628 263 119 aa, chain - ## HITS:1 COG:gutM KEGG:ns NR:ns ## COG: gutM COG4578 # Protein_GI_number: 16130613 # Func_class: K Transcription # Function: Glucitol operon activator # Organism: Escherichia coli K12 # 1 119 1 119 119 230 99.0 5e-61 MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALD DQQRIVDTLFMKGLTVFARPQKIPAITGMHVGDLQPDVIFPHDPLSQNALSLALKLKRG >gi|296918703|gb|GG772997.1| GENE 275 301734 - 302513 818 259 aa, chain - ## HITS:1 COG:ECs3561 KEGG:ns NR:ns ## COG: ECs3561 COG1028 # Protein_GI_number: 15832815 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 491 99.0 1e-139 MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGEGTAYGFGA DATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCA REFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVH SLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASP KASYCTGQSINVTGGQVMF >gi|296918703|gb|GG772997.1| GENE 276 302517 - 302888 300 123 aa, chain - ## HITS:1 COG:ECs3560 KEGG:ns NR:ns ## COG: ECs3560 COG3731 # Protein_GI_number: 15832814 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Escherichia coli O157:H7 # 1 123 1 123 123 242 97.0 1e-64 MTVIYQTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHCHGELKGALHPGLQFSL GQHRYPVTAVGSVAEDNLRELGYVTLRFDGLSEAEFPGTVHVAGPVPDDIAPGSVLKFES VKE >gi|296918703|gb|GG772997.1| GENE 277 302899 - 303858 1017 319 aa, chain - ## HITS:1 COG:srlE KEGG:ns NR:ns ## COG: srlE COG3732 # Protein_GI_number: 16130610 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Escherichia coli K12 # 1 319 1 319 319 584 98.0 1e-167 MTRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQLTGWQAIDGFKEGEPA EAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITVV GEATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVAVLFQSGRDTIDTVLKTILPF MAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLALICSFPLLSPFLGPGAVIAQVI GVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVLVSRF LTGAPTVLIAWFVSGFIYQ >gi|296918703|gb|GG772997.1| GENE 278 303855 - 304418 778 187 aa, chain - ## HITS:1 COG:srlA KEGG:ns NR:ns ## COG: srlA COG3730 # Protein_GI_number: 16130609 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIC # Organism: Escherichia coli K12 # 1 187 1 187 187 362 98.0 1e-100 MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNALINFIGQHRIERFAQRC AGNPVSRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPG ELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWVTDLTTAIFEKKMGIQLEQKV RLAGATS >gi|296918703|gb|GG772997.1| GENE 279 304675 - 305760 1045 361 aa, chain + ## HITS:1 COG:mltB KEGG:ns NR:ns ## COG: mltB COG2951 # Protein_GI_number: 16130608 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Escherichia coli K12 # 1 361 1 361 361 716 99.0 0 MFKRRYVTLLPLFVLLAACSSKPKPTETETTTGTPSGGFLLEPQHNVMQMGGDFANNPNA QQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTTSVKPPSGPNGAWLRYRKK FITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALAT LSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSG DGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMANGQAPGLPNGFKTRYSISQLAAAGL TPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVALARV Q >gi|296918703|gb|GG772997.1| GENE 280 305905 - 306402 301 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 3 157 746 898 904 120 45 6e-26 MTDSELMQLSEQVGQSLKARGATVTTAESCTGGWVAKVITDIAGSSAWFERGFVTYSNEA KAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSISGIAGPDGGSEEKPVGTV WFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQFLQNT >gi|296918703|gb|GG772997.1| GENE 281 306482 - 307543 1477 353 aa, chain + ## HITS:1 COG:ECs3556 KEGG:ns NR:ns ## COG: ECs3556 COG0468 # Protein_GI_number: 15832810 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 666 100.0 0 MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQP DTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIG QGKANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF >gi|296918703|gb|GG772997.1| GENE 282 307612 - 308112 616 166 aa, chain + ## HITS:1 COG:ECs3555 KEGG:ns NR:ns ## COG: ECs3555 COG2137 # Protein_GI_number: 15832809 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 311 99.0 4e-85 MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVI AWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCAL ARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIHDIWRNFAD >gi|296918703|gb|GG772997.1| GENE 283 308153 - 308335 139 60 aa, chain - ## HITS:1 COG:no KEGG:ECSP_3645 NR:ns ## KEGG: ECSP_3645 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 60 74 133 133 117 100.0 2e-25 MGYQGAAGNYLMSLTMEKVEKRLTDLSGALAHNYPEIKLTKYRHQLQRVLTAGLVTEKWE >gi|296918703|gb|GG772997.1| GENE 284 308240 - 310870 2994 876 aa, chain + ## HITS:1 COG:ECs3554 KEGG:ns NR:ns ## COG: ECs3554 COG0013 # Protein_GI_number: 15832808 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 876 1 876 876 1712 99.0 0 MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYS RATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKW FALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCG PCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMG LERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVM PSNESRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVL KTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKV DEAGFDAAMEEQRRRAREASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAV DAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLAAG SLKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSH NEAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGD FSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHL LKGDSNNLADKVRSVLERTRQLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSG VEPKMLRTMVDDLKNQLGSTIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVG GKGGGRPDMAQAGGTDAAALPAALASVKGWVSAKLQ >gi|296918703|gb|GG772997.1| GENE 285 311105 - 311290 204 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 [Haemophilus parasuis 29755] # 1 60 1 60 61 83 61 1e-14 MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSS Y Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:42:18 2011 Seq name: gi|296918702|gb|GG772998.1| Escherichia coli MS 110-3 genomic scaffold Scfld74, whole genome shotgun sequence Length of sequence - 19749 bp Number of predicted genes - 19, with homology - 18 Number of transcription units - 12, operones - 4 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 352 - 411 2.2 1 1 Op 1 6/0.000 + CDS 492 - 881 129 ## COG2963 Transposase and inactivated derivatives 2 1 Op 2 5/0.000 + CDS 878 - 1225 301 ## COG3436 Transposase and inactivated derivatives 3 1 Op 3 . + CDS 1241 - 2659 643 ## COG3436 Transposase and inactivated derivatives + Term 2813 - 2849 0.2 4 2 Tu 1 . - CDS 2898 - 4256 1412 ## ECO26_5466 hypothetical protein - Prom 4352 - 4411 4.9 + Prom 4835 - 4894 2.6 5 3 Tu 1 . + CDS 4947 - 5051 64 ## 6 4 Tu 1 . - CDS 5421 - 6203 431 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 6232 - 6291 3.8 7 5 Op 1 2/0.250 + CDS 6509 - 7429 740 ## COG0524 Sugar kinases, ribokinase family 8 5 Op 2 . + CDS 7457 - 8773 986 ## COG0738 Fucose permease 9 5 Op 3 . + CDS 8785 - 9798 566 ## EC55989_4931 deoxyribose specific mutarotase + Term 9819 - 9880 3.1 + Prom 10154 - 10213 3.5 10 6 Tu 1 . + CDS 10241 - 10495 108 ## COG2963 Transposase and inactivated derivatives + Term 10693 - 10736 1.4 - Term 10677 - 10728 6.1 11 7 Op 1 11/0.000 - CDS 10742 - 11977 1169 ## COG3037 Uncharacterized protein conserved in bacteria 12 7 Op 2 13/0.000 - CDS 12011 - 12298 167 ## PROTEIN SUPPORTED gi|148984431|ref|ZP_01817719.1| PTS system, IIB component, putative 13 7 Op 3 . - CDS 12314 - 12757 535 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 12817 - 12876 3.1 + Prom 12751 - 12810 6.1 14 8 Tu 1 . + CDS 13028 - 14059 662 ## COG1609 Transcriptional regulators 15 9 Tu 1 . + CDS 14451 - 14744 138 ## EC55989_4923 putative transposase (fragment), IS110 family + Term 14769 - 14817 -0.2 - Term 15867 - 15902 -0.3 16 10 Tu 1 . - CDS 16029 - 16193 116 ## EC55989_4919 hypothetical protein - Term 16226 - 16283 11.5 17 11 Op 1 3/0.000 - CDS 16305 - 16994 643 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 18 11 Op 2 . - CDS 16994 - 18589 1329 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 18628 - 18687 2.8 + Prom 18546 - 18605 7.5 19 12 Tu 1 . + CDS 18716 - 19540 668 ## COG1737 Transcriptional regulators Predicted protein(s) >gi|296918702|gb|GG772998.1| GENE 1 492 - 881 129 129 aa, chain + ## HITS:1 COG:ECs0328 KEGG:ns NR:ns ## COG: ECs0328 COG2963 # Protein_GI_number: 15829582 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 129 5 133 133 239 98.0 7e-64 MSDMQKNVTPGRRKGCPNYPPEFKQLLVAASCEPGISISKLALENGINANLLFKWRQQWR EGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFRHGTLRFNGNVSEKLL TLLIQELKR >gi|296918702|gb|GG772998.1| GENE 2 878 - 1225 301 115 aa, chain + ## HITS:1 COG:Z2127 KEGG:ns NR:ns ## COG: Z2127 COG3436 # Protein_GI_number: 15801566 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 115 72 186 186 223 98.0 6e-59 MIPLPSGTKIWLVAGITDMRNSFNGLAAKVQTALKDDPMSGHIFIFRGRSGSQVKLLWST GDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGIDWRQPKRLLTSLTML >gi|296918702|gb|GG772998.1| GENE 3 1241 - 2659 643 472 aa, chain + ## HITS:1 COG:ECs0330 KEGG:ns NR:ns ## COG: ECs0330 COG3436 # Protein_GI_number: 15829584 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 17 472 6 512 512 883 89.0 0 MSQNKPGKIRAYERHLSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRR MNFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRKPFPESLPRD EKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQCDAIVQAPAP SRPIERGIAGPGLLARVLTSKYAEHTPLYCQSEIYGRQGVELSRSLLSGWVDACCRLLSP LEEVLHGYVMTDGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYS PDRKGIHPQTHLACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSAL TEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKTLFFGSGHGG ERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE >gi|296918702|gb|GG772998.1| GENE 4 2898 - 4256 1412 452 aa, chain - ## HITS:1 COG:no KEGG:ECO26_5466 NR:ns ## KEGG: ECO26_5466 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 452 1 452 452 890 99.0 0 MKRKIIPVLIGCTLSFSALAAQPTAERYVVSFPEGTHVNYAGAFASAFPNGLPVGIGSGL LFTGKQGDALTFATITDRGPNADSPKEGKNETKIFVTPDFAPLLMTIRVQNGKAEAIDPR PLHDDKGAINGLPLASDVIGSTNEVAFSDTLHRLKGDNRGLDTEGITPDGKGGYWLCDEY GPFLINIDSKGKIQAIHGPQAAEGEKAIAGGLPNILKWRQANRGFEGLTRMPDGRIIVAV QSTLDIDAKSKKKALFTRLVSFDPASGKTAMYGYPIDSAAYSKNSDAKIGDIVALDNQHI LLIEQGRDKNNRMRNLIYEVDLNKASDLSGFDKPGEYPEFDDEKTLSQRGITLAQKTQVV DLRSLGWQQEKAEGLALIDSKTLAVANDNDFGVKVAMQHPVEGKTFKDYRVNAEGKLTLD DKQVETTLRVKPLEKPESDSELWIVTLPEALK >gi|296918702|gb|GG772998.1| GENE 5 4947 - 5051 64 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLIWWLKLAADKECEVDTMEWSDVQAGDSLYAGL >gi|296918702|gb|GG772998.1| GENE 6 5421 - 6203 431 260 aa, chain - ## HITS:1 COG:STM3794 KEGG:ns NR:ns ## COG: STM3794 COG1349 # Protein_GI_number: 16767078 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 260 1 261 261 436 83.0 1e-122 METKQKERIRRLMELLKKTDRIHLKDAARMLEVSVMTIRRDLHQEDEPLPLTLLGGYIVM VNKPAPSMPVIHDVPKNHRDDLPIAILAAGMVNENDLIFFDNGQEIPLVISMIPDAITFT GICYSHRVFVALNEKPNVTAILCGGTYRARSDAFYDASNSSPLDSLNPRKIFISASGVHN HFGVSWFNPEDLATKRKAMNRGLRKILLARHALFDEVASASLAPISAFDVLISDRPLPAD YVTHCQNGSVKIITPDSEDE >gi|296918702|gb|GG772998.1| GENE 7 6509 - 7429 740 306 aa, chain + ## HITS:1 COG:STM3793 KEGG:ns NR:ns ## COG: STM3793 COG0524 # Protein_GI_number: 16767077 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 1 306 1 306 306 599 96.0 1e-171 MDIAVIGSNMVDLITYTNQMPKEGETLEAPAFKIGCGGKGANQAVAAAKLNSKVLMLTKV GDDIFADNTIRNLESWGINTTYVEKVPCTSSGVAPIFVNANSSNSILIIKGANKFLSPED IDRAAEDLKKCKLIVLQLEVQLETVYHAIEFGKKNGIEVLLNPAPALRELDMSYACKCDF FIPNETELEILTGMSVDTYDHIRLAARSLVDKGLNNIIVTMSEKGALWMTRDQEVHVPAF KVNAVDTSGAGDAFIGCFSHYYVQSGDVEAALKKAALFAAFSVTGKGTQSSYPSIEQFNE FLTLNE >gi|296918702|gb|GG772998.1| GENE 8 7457 - 8773 986 438 aa, chain + ## HITS:1 COG:STM3792 KEGG:ns NR:ns ## COG: STM3792 COG0738 # Protein_GI_number: 16767076 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Salmonella typhimurium LT2 # 1 438 1 438 438 748 96.0 0 MNDKNIIQMPDGYLNKTPLFQFILLSCLFPLWGCAAALNDILITQFKSVFSLSNFASALV QSAFYGGYFLIAIPASLVIKKTSYKVAILIGLTLYIGGCTLFFPASHMATYTMFLAAIFA IAIGLSFLETAANTYSSMIGPKAYATLRLNISQTFYPIGAASGILLGKYLVFSEGESLEK QMSGMNAEQIHNFKVLMLENTLEPYKYMIMILVVVMVLFLLTRFPTCKVAQTSHYKRPSA MDTLRYLARNPRFRRGIVAQFLYVGMQVAVWSFTIRLALELGDINERDASNFMVYSFACF FIGKFIANILMTRFNPEKVLILYSVIGALFLAYVALAPSFSAVYVAVLVSVLFGPCWATI YAGTLDTVDNEHTEMAGAVIVMAIVGAAVVPAIQGYIADMFHSLQLSFLVSMLCFVYVGV YFWRESKVRTALAEVTAS >gi|296918702|gb|GG772998.1| GENE 9 8785 - 9798 566 337 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4931 NR:ns ## KEGG: EC55989_4931 # Name: deoM # Def: deoxyribose specific mutarotase # Organism: E.coli_55989 # Pathway: not_defined # 1 337 1 337 337 713 100.0 0 MSTRINLWRALFGEKPRILLENSDFTVTSFRYDSGVEGLKIANSRGHLIILPWMGQMIWD AQFDGHGLTMCNMFRQPKPATEVIETYGCFAFHSGLLANGCPSAEDTHLLHGEMACAAMD EAWLELDGDMLRLNGRYEYVMGFGHHYLAQPTVVLHKSSTLFDIKMAVTNLASVDMPLQY MCHMNYAYIPNATFSQNIPDEILRLRESVPSHVNPTAQWLAFNQRIMQGEASLSTLSQPE FYDPEIVFFADKLDAYTDQPEFRMISPDGTTFVTRFYSAELNYVTRWILYNGEQQVAAFA LPATCRPEGYLAAQRNGTLIQVAPQQTRTFTVTTGIE >gi|296918702|gb|GG772998.1| GENE 10 10241 - 10495 108 84 aa, chain + ## HITS:1 COG:ECs1337 KEGG:ns NR:ns ## COG: ECs1337 COG2963 # Protein_GI_number: 15830591 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 82 1 82 141 118 80.0 2e-27 MEQKTLSAEPRRSFSNGFKLQMVTLALQPRGSVARIAREHDINDNLLFKWLRLSLIKGRI SRRLPLTNSSGIGVELLPVEMTLG >gi|296918702|gb|GG772998.1| GENE 11 10742 - 11977 1169 411 aa, chain - ## HITS:1 COG:YPO2782 KEGG:ns NR:ns ## COG: YPO2782 COG3037 # Protein_GI_number: 16122986 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 411 8 418 418 665 95.0 0 MSDVLSEPAVLVGLIALIGLIAQKKPVTECIKGTVKTIMGFVILGAGAGLVVSSLGDFAN IFQHAFGIQGVVPNNEAIVSVAQKSFGKEMAMIMFFAMVINIMIARFTPWKFIFLTGHHT LFMSMMVAVILATAGMTGITLIAVGSLVVGVAMVFFPAIAHPYMKKVTGSDDVAIGHFST LSYVLAGFIGSKFGNKEHSTEDMNVPKSLLFLRDTPVAISFTMSIIFLVTCLFAGADAVK ELSGGKNWFMFSIMQSITFAAGVYIILQGVRMVIAEIVPAFKGISDKLVPNARPALDCPV VFPYAPNAVLVGFLSSFAAGLIGMFTLYLLNMIVIIPGVVPHFFVGAAAGVFGNATGGRR GAILGAFAQGLLITFLPVFLLPVLGDIGFANTTFSDADFGALGILLGIIVR >gi|296918702|gb|GG772998.1| GENE 12 12011 - 12298 167 95 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984431|ref|ZP_01817719.1| PTS system, IIB component, putative [Streptococcus pneumoniae SP3-BS71] # 1 95 2 94 94 68 37 2e-11 MKITVVCGNGLGTSLMMEMSIKSILKDLSVSADVDHVDLGSAKGTPSDIYVGTKDIAEQL VAQSVAGKIVALENMIDKKAMRERLSVVLNELGAL >gi|296918702|gb|GG772998.1| GENE 13 12314 - 12757 535 147 aa, chain - ## HITS:1 COG:YPO2569 KEGG:ns NR:ns ## COG: YPO2569 COG1762 # Protein_GI_number: 16122787 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Yersinia pestis # 1 147 1 147 147 224 76.0 5e-59 MLKNLLNTEVVQVVEQAKDWREAVAISCRPLIENGSIEPRYVDAIYRSHDTIGPYYVVGP GIAMPHARPEEGANKLSLALTLIPSGVNFDADENDPVKLLIVLAATDSTSHIEAISQLAK LFDNEKDIQAILMAKTTQDILSVIARY >gi|296918702|gb|GG772998.1| GENE 14 13028 - 14059 662 343 aa, chain + ## HITS:1 COG:YPO2568 KEGG:ns NR:ns ## COG: YPO2568 COG1609 # Protein_GI_number: 16122786 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 343 1 344 344 545 78.0 1e-155 MEKTRKRRGTGRVTLQEVANFAGVGTMTVSRALRTPEQVSDKLREKIEQAVEELGYIPNR TAGALASGHSDTVAVLVPSLTDKASSRFMQSLQQVLNKNEFQLLLGCHEYNQLKEAEILM TLLQGNPAALVIFGSQLADKTHQILEKTNIPTINVVGSPFSPAQITIETAFFEASHKLTE HLLEQGYKNIGFIGAHMDNRLQRQQLNGWHKAMLSHYQNSDLVITMPDAASLQLGRYALN EILLRQPELDAVICSHEEIALGIMFECQRRLLKIPENIAVACLDGSDNCDQTHPTLTSIR IDYKKMGIETGKLLIGLLNNNHDESEESRIVQFNYQIELRQST >gi|296918702|gb|GG772998.1| GENE 15 14451 - 14744 138 97 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4923 NR:ns ## KEGG: EC55989_4923 # Name: not_defined # Def: putative transposase (fragment), IS110 family # Organism: E.coli_55989 # Pathway: not_defined # 1 97 1 97 97 174 98.0 7e-43 MIAAIVDELAPELIKRNAVGYESASQLLITAGDNPQRLRIESGFAVLCGVNSVTVSSKKM NRYRLNRGGERAANSALHIIAIGRLRTDDKTKEYVAK >gi|296918702|gb|GG772998.1| GENE 16 16029 - 16193 116 54 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4919 NR:ns ## KEGG: EC55989_4919 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 54 18 71 71 102 96.0 4e-21 MRGTIDALDELFATLSYDKPRVIALHFKISEGYTLLMLITTFTSCLILCKNYGW >gi|296918702|gb|GG772998.1| GENE 17 16305 - 16994 643 229 aa, chain - ## HITS:1 COG:lin2933 KEGG:ns NR:ns ## COG: lin2933 COG3010 # Protein_GI_number: 16801992 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Listeria innocua # 3 227 4 228 231 250 54.0 2e-66 MKTVLDSLKGKLIVSCQALENEPLHSPFIMSRMALAAAQGGAAGIRANSVADISAIKEIV SLPMIGIIKRDYPGSEVFITATLREVDELMTVEPEIIALDATARPRPGGQTLEELVTQIR ARYPSVLLMADIATVEEAVTAERLGFDCVGTTLYGYTAETARHVLAENDCGFLREVLAAV SVPVVAEGNVDTPERAARCLTLGAHTVVVGGAITRPQQITTRFIAAIAS >gi|296918702|gb|GG772998.1| GENE 18 16994 - 18589 1329 531 aa, chain - ## HITS:1 COG:SA0233_1 KEGG:ns NR:ns ## COG: SA0233_1 COG1263 # Protein_GI_number: 15925945 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Staphylococcus aureus N315 # 27 444 5 422 437 543 70.0 1e-154 MVKIFINDRGDEKMMQIFSGASSGAWFEKAQRFGKSFMLPIAVLPAAGLLLGIGGALSNP NTLTAYPFLNVDWLQAIFTIMTSAGSIVFANLSVLFAVGVAVGLAKSDKGTAGLAALLAF LVMNATINALLTLNGTLAHKNPGSVGQGMTLGIQTLETGVFGGVVIGLVTCTLHSRFNKV SLPQFLGFFSGSRFVPIISSLAAIVVGAVMTVVWPHFQKLIFGLGGLVDATGYLGTLLYG FILRMLGPLGLHHIFYLPFWTTALGGSEIVNGQLVEGTQRIFFAQLADPNTQQFYAGTAR FMSGRFITMMFGLLGACLAMYHTAKPENRKVVAGLLLSAALTSFLTGITEPVEFSFLFVA PVLYVIHAFFDGLAFMVAHILHITIGQTFSGGLIDFLLFGVLQGESKTNWMYVPIVGIPW FFLYYFTFRYLINRFGWLTPGRENVTLVESGQPQSERAAAVIAGLGGKENLEEVDCCATR LRVTVKESSKVDEAALKVTGARGVIIRGNGVQVIYGPHVTIIKNEVEEILS >gi|296918702|gb|GG772998.1| GENE 19 18716 - 19540 668 274 aa, chain + ## HITS:1 COG:VC1775 KEGG:ns NR:ns ## COG: VC1775 COG1737 # Protein_GI_number: 15641778 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 5 273 5 276 278 201 43.0 1e-51 MPENENLLLRLRQSVDGYSRTQQKLGEFVLSDPAKVVYLTITELARESGTSEASVTRLCR TLGCKGYNEFKMALALDLRQVQSVEYGGDEIDNVVNESVQALQDTAKLLDRTLLEAATLA LHQAQSVQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKNTFVVAISS SGSTRDLLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAKPEGPLSAGALNAKVGV MLLVELLTTSLIALDHKYSDVSQQTASATLPLLL Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:43:13 2011 Seq name: gi|296918701|gb|GG772999.1| Escherichia coli MS 110-3 genomic scaffold Scfld86, whole genome shotgun sequence Length of sequence - 109249 bp Number of predicted genes - 100, with homology - 99 Number of transcription units - 56, operones - 19 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 58 - 327 141 ## COG5525 Bacteriophage tail assembly protein + Term 342 - 389 2.1 - Term 1043 - 1076 5.4 2 2 Op 1 4/0.333 - CDS 1100 - 1606 591 ## COG3685 Uncharacterized protein conserved in bacteria 3 2 Op 2 3/0.524 - CDS 1652 - 2152 533 ## COG3685 Uncharacterized protein conserved in bacteria - Term 2158 - 2197 6.2 4 2 Op 3 2/0.762 - CDS 2238 - 2417 199 ## COG3729 General stress protein - Prom 2602 - 2661 4.5 - Term 2758 - 2790 5.4 5 3 Op 1 37/0.000 - CDS 2798 - 3604 386 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc 6 3 Op 2 13/0.000 - CDS 3604 - 4797 1251 ## COG0133 Tryptophan synthase beta chain 7 3 Op 3 21/0.000 - CDS 4809 - 6167 1077 ## COG0134 Indole-3-glycerol phosphate synthase 8 3 Op 4 10/0.000 - CDS 6171 - 7766 1559 ## COG0547 Anthranilate phosphoribosyltransferase 9 3 Op 5 . - CDS 7766 - 9328 1440 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 9491 - 9550 6.1 + Prom 9464 - 9523 6.1 10 4 Op 1 6/0.095 + CDS 9602 - 10483 430 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 11 4 Op 2 . + CDS 10480 - 11100 757 ## COG0009 Putative translation factor (SUA5) 12 4 Op 3 . + CDS 11128 - 13023 718 ## APECO1_428 hypothetical protein + Term 13156 - 13192 3.4 + Prom 13052 - 13111 3.8 13 5 Tu 1 . + CDS 13236 - 14111 1152 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 14120 - 14152 1.5 - Term 14107 - 14140 2.5 14 6 Op 1 5/0.190 - CDS 14151 - 14741 658 ## COG2109 ATP:corrinoid adenosyltransferase 15 6 Op 2 . - CDS 14738 - 15496 765 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 15548 - 15607 2.1 + Prom 15627 - 15686 3.0 16 7 Tu 1 . + CDS 15716 - 16765 1004 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 16770 - 16810 5.5 - Term 16758 - 16798 5.5 17 8 Tu 1 . - CDS 16801 - 17052 396 ## ECIAI1_1292 hypothetical protein - Prom 17173 - 17232 4.8 + Prom 17211 - 17270 3.7 18 9 Tu 1 . + CDS 17432 - 20029 2718 ## COG0550 Topoisomerase IA + Term 20061 - 20091 2.1 + Prom 20113 - 20172 7.5 19 10 Tu 1 . + CDS 20239 - 21213 864 ## COG0583 Transcriptional regulator + Term 21224 - 21276 9.1 + Prom 21431 - 21490 4.7 20 11 Op 1 . + CDS 21544 - 21672 61 ## ECS88_1414 hypothetical protein 21 11 Op 2 . + CDS 21675 - 21842 152 ## ECS88_1415 hypothetical protein + Prom 22092 - 22151 3.5 22 12 Tu 1 . + CDS 22201 - 24876 2544 ## COG1048 Aconitase A + Term 24937 - 24973 5.0 - Term 24865 - 24919 0.2 23 13 Tu 1 . - CDS 24940 - 25530 678 ## COG0807 GTP cyclohydrolase II - Prom 25604 - 25663 1.8 + Prom 25620 - 25679 4.5 24 14 Tu 1 . + CDS 25700 - 26464 422 ## COG0671 Membrane-associated phospholipid phosphatase + Prom 26490 - 26549 2.9 25 15 Op 1 8/0.000 + CDS 26613 - 26921 201 ## PROTEIN SUPPORTED gi|46133578|ref|ZP_00203203.1| COG3771: Predicted membrane protein 26 15 Op 2 7/0.048 + CDS 26928 - 28097 1158 ## COG2956 Predicted N-acetylglucosaminyl transferase + Prom 28178 - 28237 7.6 27 16 Op 1 6/0.095 + CDS 28289 - 29026 598 ## COG0284 Orotidine-5'-phosphate decarboxylase 28 16 Op 2 . + CDS 29026 - 29352 514 ## COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins + Term 29361 - 29392 4.1 - Term 29345 - 29384 8.4 29 17 Tu 1 . - CDS 29478 - 29696 362 ## G2583_1624 hypothetical protein - Prom 29844 - 29903 5.9 - Term 29896 - 29954 4.1 30 18 Op 1 . - CDS 29965 - 30714 644 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 30743 - 30802 7.3 31 18 Op 2 . - CDS 30804 - 30977 215 ## EC55989_1446 hypothetical protein - Prom 31055 - 31114 6.3 - Term 31012 - 31054 3.1 32 19 Tu 1 . - CDS 31125 - 33110 1385 ## COG2200 FOG: EAL domain - Prom 33198 - 33257 6.4 - Term 33297 - 33333 6.3 33 20 Op 1 1/0.810 - CDS 33344 - 35278 1965 ## COG4776 Exoribonuclease II 34 20 Op 2 1/0.810 - CDS 35346 - 36473 353 ## COG4950 Uncharacterized protein conserved in bacteria - Prom 36555 - 36614 2.7 - Term 36567 - 36597 4.1 35 21 Tu 1 . - CDS 36618 - 37406 1041 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) - Prom 37487 - 37546 4.2 + Prom 37779 - 37838 6.7 36 22 Op 1 15/0.000 + CDS 37884 - 38450 486 ## COG1309 Transcriptional regulator + Term 38471 - 38500 2.1 + Prom 38481 - 38540 2.7 37 22 Op 2 27/0.000 + CDS 38599 - 39720 1066 ## COG0845 Membrane-fusion protein 38 22 Op 3 9/0.000 + CDS 39720 - 42827 2552 ## COG0841 Cation/multidrug efflux pump 39 22 Op 4 3/0.524 + CDS 42831 - 44204 463 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 40 22 Op 5 . + CDS 44213 - 45376 840 ## COG0477 Permeases of the major facilitator superfamily - Term 45369 - 45416 10.1 41 23 Op 1 8/0.000 - CDS 45424 - 46242 448 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 42 23 Op 2 8/0.000 - CDS 46232 - 47224 468 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 43 23 Op 3 8/0.000 - CDS 47224 - 48114 980 ## COG4171 ABC-type antimicrobial peptide transport system, permease component 44 23 Op 4 8/0.000 - CDS 48101 - 49066 583 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 45 23 Op 5 . - CDS 49063 - 50706 1404 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 50729 - 50788 3.5 46 24 Tu 1 . - CDS 51019 - 51264 282 ## SDY_1637 hypothetical protein - Term 51577 - 51613 4.0 47 25 Tu 1 . - CDS 51691 - 52668 921 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Prom 52770 - 52829 2.8 + Prom 52644 - 52703 4.5 48 26 Op 1 . + CDS 52834 - 53502 988 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription 49 26 Op 2 . + CDS 53556 - 53780 309 ## ECIAI39_1656 phage shock protein B 50 26 Op 3 . + CDS 53780 - 54139 523 ## COG1983 Putative stress-responsive transcriptional regulator 51 26 Op 4 . + CDS 54148 - 54369 212 ## ECIAI39_1658 peripheral inner membrane phage-shock protein 52 26 Op 5 1/0.810 + CDS 54444 - 54758 385 ## COG0607 Rhodanese-related sulfurtransferase + Term 54772 - 54805 3.6 + Prom 54816 - 54875 2.7 53 27 Op 1 2/0.762 + CDS 54941 - 56647 1121 ## COG0366 Glycosidases 54 27 Op 2 35/0.000 + CDS 56661 - 57953 1450 ## COG1653 ABC-type sugar transport system, periplasmic component 55 27 Op 3 38/0.000 + CDS 57974 - 58855 990 ## COG1175 ABC-type sugar transport systems, permease components 56 27 Op 4 5/0.190 + CDS 58842 - 59684 850 ## COG0395 ABC-type sugar transport system, permease component 57 27 Op 5 3/0.524 + CDS 59715 - 60767 1269 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 58 27 Op 6 16/0.000 + CDS 60786 - 61574 943 ## COG1082 Sugar phosphate isomerases/epimerases 59 27 Op 7 4/0.333 + CDS 61596 - 62639 878 ## COG0673 Predicted dehydrogenases and related proteins 60 27 Op 8 11/0.000 + CDS 62705 - 64903 1592 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) 61 27 Op 9 3/0.524 + CDS 64900 - 65559 440 ## COG0637 Predicted phosphatase/phosphohexomutase 62 27 Op 10 . + CDS 65573 - 66655 1077 ## COG3839 ABC-type sugar transport systems, ATPase components 63 27 Op 11 . + CDS 66700 - 67605 998 ## UTI89_C1590 outer membrane protein G + Term 67619 - 67664 0.2 64 28 Tu 1 . - CDS 67656 - 68654 843 ## COG1609 Transcriptional regulators - Prom 68683 - 68742 3.8 + Prom 68712 - 68771 4.1 65 29 Op 1 9/0.000 + CDS 68810 - 70207 1175 ## COG3106 Predicted ATPase 66 29 Op 2 5/0.190 + CDS 70204 - 71265 1137 ## COG3768 Predicted membrane protein + Term 71318 - 71360 1.9 + Prom 71325 - 71384 6.5 67 30 Tu 1 . + CDS 71413 - 72954 1442 ## COG3283 Transcriptional regulator of aromatic amino acids metabolism + Term 72957 - 73009 15.3 - Term 72943 - 72997 15.7 68 31 Tu 1 . - CDS 72998 - 73504 669 ## COG2077 Peroxiredoxin - Prom 73600 - 73659 3.2 + Prom 73501 - 73560 4.3 69 32 Tu 1 . + CDS 73623 - 74588 882 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 70 33 Tu 1 . - CDS 74563 - 75291 388 ## COG2866 Predicted carboxypeptidase - Prom 75424 - 75483 5.7 - Term 75524 - 75562 7.0 71 34 Op 1 . - CDS 75582 - 76220 510 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 72 34 Op 2 . - CDS 76217 - 76291 60 ## 73 34 Op 3 . - CDS 76291 - 77208 876 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 77324 - 77383 3.2 + Prom 77152 - 77211 3.2 74 35 Tu 1 . + CDS 77349 - 78248 194 ## COG0583 Transcriptional regulator + Term 78389 - 78419 1.1 + Prom 78496 - 78555 6.2 75 36 Tu 1 . + CDS 78585 - 80198 1248 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 80210 - 80252 -0.6 - Term 80013 - 80047 0.3 76 37 Tu 1 . - CDS 80249 - 81280 781 ## COG0668 Small-conductance mechanosensitive channel - Prom 81410 - 81469 4.3 + Prom 81428 - 81487 2.3 77 38 Tu 1 . + CDS 81524 - 81781 329 ## ECDH10B_1452 inner membrane protein + Term 81792 - 81821 2.8 - Term 81779 - 81809 3.0 78 39 Tu 1 7/0.048 - CDS 81865 - 82815 1037 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 82853 - 82912 3.7 - Term 82885 - 82945 11.0 79 40 Tu 1 4/0.333 - CDS 82967 - 83719 802 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 83745 - 83804 6.2 80 41 Tu 1 . - CDS 83914 - 84429 345 ## COG0350 Methylated DNA-protein cysteine methyltransferase - Term 84792 - 84832 4.3 81 42 Tu 1 . - CDS 84961 - 85776 271 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 85808 - 85867 6.3 + Prom 85772 - 85831 3.7 82 43 Op 1 19/0.000 + CDS 85873 - 86901 395 ## COG1566 Multidrug resistance efflux pump 83 43 Op 2 . + CDS 86907 - 88412 633 ## COG0477 Permeases of the major facilitator superfamily + Prom 88426 - 88485 3.1 84 44 Tu 1 . + CDS 88607 - 89170 481 ## COG2840 Uncharacterized protein conserved in bacteria 85 45 Tu 1 . - CDS 89191 - 90423 857 ## COG2199 FOG: GGDEF domain - Prom 90497 - 90556 2.3 + Prom 90530 - 90589 5.1 86 46 Tu 1 . + CDS 90732 - 91661 728 ## COG0598 Mg2+ and Co2+ transporters + Term 91763 - 91807 2.2 87 47 Tu 1 . + CDS 92214 - 93512 1065 ## COG0513 Superfamily II DNA and RNA helicases - Term 93593 - 93630 6.9 88 48 Op 1 3/0.524 - CDS 93641 - 94576 1028 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 89 48 Op 2 . - CDS 94628 - 94936 125 ## COG0582 Integrase - Prom 95130 - 95189 3.7 90 49 Tu 1 . - CDS 96445 - 96666 56 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components - Prom 96776 - 96835 5.2 - Term 96864 - 96895 2.4 91 50 Tu 1 . - CDS 96903 - 97337 468 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 97359 - 97418 4.2 - Term 97439 - 97469 2.5 92 51 Tu 1 . - CDS 97478 - 98611 1251 ## COG3203 Outer membrane protein (porin) - Prom 98745 - 98804 10.3 - Term 98909 - 98940 3.2 93 52 Tu 1 . - CDS 98977 - 102501 3258 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 102648 - 102707 4.7 + Prom 102616 - 102675 3.0 94 53 Tu 1 . + CDS 102775 - 103041 182 ## COG3042 Putative hemolysin + Term 103267 - 103322 4.1 95 54 Op 1 . - CDS 103038 - 103472 199 ## PROTEIN SUPPORTED gi|163801140|ref|ZP_02195040.1| 50S ribosomal protein L25 - Prom 103494 - 103553 2.8 - Term 103528 - 103563 6.1 96 54 Op 2 . - CDS 103571 - 104560 1215 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 104600 - 104659 8.5 + Prom 104566 - 104625 4.5 97 55 Op 1 . + CDS 104768 - 107407 2091 ## ECS88_1497 hypothetical protein 98 55 Op 2 . + CDS 107404 - 107589 290 ## EcSMS35_1769 putative lipoprotein 99 55 Op 3 . + CDS 107654 - 107923 262 ## COG3784 Uncharacterized protein conserved in bacteria + Prom 108063 - 108122 8.1 100 56 Tu 1 . + CDS 108299 - 109247 388 ## ECP_1410 autotransporter beta-domain; region: autotransporter; cl02365 Predicted protein(s) >gi|296918701|gb|GG772999.1| GENE 1 58 - 327 141 89 aa, chain + ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 27 89 185 247 247 97 82.0 6e-21 MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLE AWNKYRVLLNRVDTSTAPDIEWPANPVRE >gi|296918701|gb|GG772999.1| GENE 2 1100 - 1606 591 168 aa, chain - ## HITS:1 COG:ECs1829 KEGG:ns NR:ns ## COG: ECs1829 COG3685 # Protein_GI_number: 15831083 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 168 1 168 168 307 98.0 5e-84 MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETIL DRNDISRSVIKDSMSKIAALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAAKN AGDTASIPIIEAILNDEKHMADWLIQHIPQTTEKFLIRSETDGVEAKK >gi|296918701|gb|GG772999.1| GENE 3 1652 - 2152 533 166 aa, chain - ## HITS:1 COG:ECs1830 KEGG:ns NR:ns ## COG: ECs1830 COG3685 # Protein_GI_number: 15831084 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 229 98.0 1e-60 MNMKTIEDVIIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQ VVESESNLKIKRMKCVAMEGLIEEANEVIENTEKNEVRDAALIAAAQKVEHYEIASYGTL ATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLALNNVNKKAENKA >gi|296918701|gb|GG772999.1| GENE 4 2238 - 2417 199 59 aa, chain - ## HITS:1 COG:ECs1655 KEGG:ns NR:ns ## COG: ECs1655 COG3729 # Protein_GI_number: 15830909 # Func_class: R General function prediction only # Function: General stress protein # Organism: Escherichia coli O157:H7 # 1 51 1 51 60 57 92.0 9e-09 MTEHRGGSGNFAEDREKASNAGRKGGQHSGGNFKNDPQRASEAGKKGGQQSGDNKSGKS >gi|296918701|gb|GG772999.1| GENE 5 2798 - 3604 386 268 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 249 1 248 263 153 34 4e-36 MERYESLFTQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLAD GPTIQNATLRAFAAGVTPAQCFEVLALIRQKHPTIPIGLLMYANLVFNKGIDEFYAECEK VGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRA GVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKI IEQHINEPEKMLAALKAFVQPMKAATRS >gi|296918701|gb|GG772999.1| GENE 6 3604 - 4797 1251 397 aa, chain - ## HITS:1 COG:ECs1833 KEGG:ns NR:ns ## COG: ECs1833 COG0133 # Protein_GI_number: 15831087 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Escherichia coli O157:H7 # 1 397 1 397 397 792 99.0 0 MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQFNDLLKNYAGRPTALT KCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTKIIAETGAGQHGVASA LASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGS YETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGM FADFINETDVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSI SAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALK MMRENPEKEQLLVVNLSGRGDKDIFTVHDILKARGEI >gi|296918701|gb|GG772999.1| GENE 7 4809 - 6167 1077 452 aa, chain - ## HITS:1 COG:ZtrpC_1 KEGG:ns NR:ns ## COG: ZtrpC_1 COG0134 # Protein_GI_number: 15801916 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Escherichia coli O157:H7 EDL933 # 1 253 2 254 254 490 96.0 1e-138 MQTVLAKIVADKAIWVEARKQQQPLASFQNEIQPSTRHFYDALQGARTAFILECKKASPS KGVIRDDFDPARIATVYRNYASAISVLTDEKYFQGSFDFLPIVSQIAPQPILCKDFIIDP YQIYLARYYQADACLLMLSVLDDEQYRQLAAVAHSLEMGVLTEVSNEEELERAIALGAKV VGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSALM AHDDLNAAVRRVLLGENKVCGLTRPQDARAAYDAGAIYGGLIFVTTSPRCVSVEQAQEVM AAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNEDQLYIDTLREALPAHVAIWKALS VGETLPARDFQHIDKYVFDNGQGGSGQRFDWSLLNGQSLGNVLLAGGLGADNCVEAAQTG CAGLDFNSAVESQPGIKDARLLASVFQTLRAY >gi|296918701|gb|GG772999.1| GENE 8 6171 - 7766 1559 531 aa, chain - ## HITS:1 COG:ECs1835_2 KEGG:ns NR:ns ## COG: ECs1835_2 COG0547 # Protein_GI_number: 15831089 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 197 531 1 335 335 603 99.0 1e-172 MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERLATMSNPVLMLSPGPGV PSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMF AGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESILTTQGA RLLEQTLAWAQQKLEPTNTLQPILEKLYQAQTLSQQESHQLFSAVVRGELKPEQLAAALV SMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAAC GLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHA MPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGG MDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQEQLAGGTPEENRDILTRLLQGKG DAAHEAAVAANVAMLMRLHGHEDLQANAQTVLEVLRSGSAYDRVTALAARG >gi|296918701|gb|GG772999.1| GENE 9 7766 - 9328 1440 520 aa, chain - ## HITS:1 COG:ECs1836 KEGG:ns NR:ns ## COG: ECs1836 COG0147 # Protein_GI_number: 15831090 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Escherichia coli O157:H7 # 1 520 1 520 520 1017 98.0 0 MQTQKPTLELLTCKGAYRDNPTALFHQLCGDRPATLLLESADIDSKDDLKSLLLVDSALR ITALSDTVTIQALSGNGEALLTLLDNALPAGVENEQSPNCRVLRFPPVSPLLDEDARLCS LSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFENLPQLSAENSCPDFCFYLAET LMVIDHQKKSTRIQASLFAPNEEEKQRLTARLNELRQQLTEAAPPLPVVSVPHMRCECNQ SDEEFGGVVRLLQKAIRAGEIFQVVPSRRFSLPCPSPLAAYYVLKKSNPSPYMFFMQDND FTLFGASPESSLKYDATSRQIEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELS EHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRAC MNMGTLSGAPKVRAMQLIAEAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATV QAGAGVVLDSVPQSEADETRNKARAVLRAIATAHHAQETF >gi|296918701|gb|GG772999.1| GENE 10 9602 - 10483 430 293 aa, chain + ## HITS:1 COG:yciV KEGG:ns NR:ns ## COG: yciV COG0613 # Protein_GI_number: 16129227 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Escherichia coli K12 # 1 293 1 293 293 580 99.0 1e-165 MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISR SGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQLIAERLEK AQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVPPQWCTI EQSIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLA TLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL >gi|296918701|gb|GG772999.1| GENE 11 10480 - 11100 757 206 aa, chain + ## HITS:1 COG:ECs1839 KEGG:ns NR:ns ## COG: ECs1839 COG0009 # Protein_GI_number: 15831093 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Escherichia coli O157:H7 # 1 206 13 218 218 419 100.0 1e-117 MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLP DGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIG MRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQK PTTVIDLTDDTPVVVREGVGDVKPFL >gi|296918701|gb|GG772999.1| GENE 12 11128 - 13023 718 631 aa, chain + ## HITS:1 COG:no KEGG:APECO1_428 NR:ns ## KEGG: APECO1_428 # Name: yciQ # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 615 2 616 632 1267 100.0 0 MAGIYRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPNGVLDIKENIHFQA RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQ RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWSFEIYKTLFSLKLPDIAGNPFS EIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH LLLPSTSSLLICFPSLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY DDKGFCADIVNLIVKGKIHLEDHYDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKG DKVVLTGRRNRVLRKAFLRMQKFYLPRKKSSFYRPDAFLQWGGMAILAVILYGNLSPVGW AGMSLVGDMFIMICWLLTFLFCSLDLLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQNGQQRYAHGEAIVNYLARKEAA THSGRRRKGETRKLDYALLGWAVSANLGREWAARITPSLTAAVRAPEIARSGVLFSLQMH LSLGANTSLLGRSYSGGGAGGGAGGGGGGGW >gi|296918701|gb|GG772999.1| GENE 13 13236 - 14111 1152 291 aa, chain + ## HITS:1 COG:yciL KEGG:ns NR:ns ## COG: yciL COG1187 # Protein_GI_number: 16129230 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli K12 # 1 291 1 291 291 542 99.0 1e-154 MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEITPGLKIRIDGHLISVR ESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFT TDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGI NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYL RELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNNG >gi|296918701|gb|GG772999.1| GENE 14 14151 - 14741 658 196 aa, chain - ## HITS:1 COG:btuR KEGG:ns NR:ns ## COG: btuR COG2109 # Protein_GI_number: 16129231 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Escherichia coli K12 # 1 196 1 196 196 387 99.0 1e-108 MSDEHYQQRQQRVKEKVDARVAQAQDERGIIIVFTGNGKGKTTAAFGTATRAVGHGKKVG VVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWDTQNRESDTAACREVWQHAKRMLADSS LDMVLLDELTYMVAYDYLPLEEVVQALNERPHQQTVIITGRGCHRDILELADTVSELRPV KHAFDAGVKAQIGIDY >gi|296918701|gb|GG772999.1| GENE 15 14738 - 15496 765 252 aa, chain - ## HITS:1 COG:yciK KEGG:ns NR:ns ## COG: yciK COG1028 # Protein_GI_number: 16129232 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 252 1 252 252 493 99.0 1e-139 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEEI GRQPQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV MQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA DEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTF DAQPGRKPGISQ >gi|296918701|gb|GG772999.1| GENE 16 15716 - 16765 1004 349 aa, chain + ## HITS:1 COG:sohB KEGG:ns NR:ns ## COG: sohB COG0616 # Protein_GI_number: 16129233 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli K12 # 1 349 1 349 349 592 99.0 1e-169 MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRVNNLSEQYKEMKEELAA ALMDTHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVVTDSKPRVWVLDFKGSMDAHEVNSL REEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGG YMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENT EEGREKFREELNETHQLFKDFVKRMRPSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEV ILSLMEGREVVNVRYMQRKRLIDRFTGSAAESADRLLLRWWQRGQKPLM >gi|296918701|gb|GG772999.1| GENE 17 16801 - 17052 396 83 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_1292 NR:ns ## KEGG: ECIAI1_1292 # Name: yciN # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 83 1 83 83 158 100.0 8e-38 MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAK STAVFNMFKHLAHVLSEKYHLVD >gi|296918701|gb|GG772999.1| GENE 18 17432 - 20029 2718 865 aa, chain + ## HITS:1 COG:ZtopA_1 KEGG:ns NR:ns ## COG: ZtopA_1 COG0550 # Protein_GI_number: 15801905 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Escherichia coli O157:H7 EDL933 # 1 592 1 592 592 1164 99.0 0 MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSTAKKSADSTSTKTAKKPK KDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA WHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVNAQQARRFMDRVVGYMVS PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDASTTTPSGEALALQVTH QNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPTTSKPGAPFITSTLQQAASTRLGFG VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYASKEN SQEAHEAIRPSDVNVMAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDF RLKARGRILRFDGWTKVMPALRKGDEDRILPAVDKGDALTLVELTPAQHFTKPPARFSEA SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY DFTAQMENSLDQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGEDAETNALRAKR RCPKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL KMGRFGKYMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYV SSEKDGKATGWSAFYVDGKWVEGKK >gi|296918701|gb|GG772999.1| GENE 19 20239 - 21213 864 324 aa, chain + ## HITS:1 COG:ECs1847 KEGG:ns NR:ns ## COG: ECs1847 COG0583 # Protein_GI_number: 15831101 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 647 100.0 0 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV DAAVALRSNEEIEVMFKDIKLPEK >gi|296918701|gb|GG772999.1| GENE 20 21544 - 21672 61 42 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1414 NR:ns ## KEGG: ECS88_1414 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 42 13 54 54 72 100.0 5e-12 MPSGNQEPRRNPELKRKAWLAVFLGSALFWVVVALLIWKLWG >gi|296918701|gb|GG772999.1| GENE 21 21675 - 21842 152 55 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1415 NR:ns ## KEGG: ECS88_1415 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 55 8 62 62 83 100.0 3e-15 MVGQEQLESSPLCQHSDNEPEAKRECSVVIPDDWQLTSQQQAFIELFAEDDQPKQ >gi|296918701|gb|GG772999.1| GENE 22 22201 - 24876 2544 891 aa, chain + ## HITS:1 COG:acnA KEGG:ns NR:ns ## COG: acnA COG1048 # Protein_GI_number: 16129237 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 891 1 891 891 1774 98.0 0 MSSTLREASKDTLQAKDKTYHYYSLPLAAKSLGDITRLPKSLKVLLENLLRWQDGKSVTE EDIHALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVKRLGGDTAKVNPL SPVDLVIDHSVTVDRFGDDEAFEENVRLEMERNHERYVFLKWGKQAFSRFSVVPPGTGIC HQVNLEYLGKAVWSELQDGEWIAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQ PVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADR ATIANMSPEYGATCGFFPIDAVTLDYMRLSGRSEDQVELVEKYAKAQGMWRNPGDEPIFT SVLELDMNDVEASLAGPKRPLDRVALPDVPKAFAASRELEVNATHKDRLPVDYVMNGHQY QLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYL AKAKLTPYLDELGFNLVGYGCTTCIGNSGPLPDPIETAIKKGDLTVGAVLSGNRNFEGRI HPLVKTNWLASPPLVVAYALAGNMNINLASEPIGHDRKGEPVYLKDIWPSAQEIARAVDQ VSTEMFRKEYAEVFEGTAEWKEINVTRSDTYGWQEDSTYIRLSPFFDEMQATPAPVEDIH GARILAMLGDSVTTDHISPAGSIKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGT FANIRIRNEMVPGVEGGMTCHLPDSDVVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDW AAKGPRLLGIRVVIAESFERIHRSNLIGMGILPLEFPQGVTRKTLELTGEEKIDIGDLQN LQPGATVPVTLTRADGSQEVVPCRCRIDTATELTYYQNDGILHYVIRNMLK >gi|296918701|gb|GG772999.1| GENE 23 24940 - 25530 678 196 aa, chain - ## HITS:1 COG:ECs1850 KEGG:ns NR:ns ## COG: ECs1850 COG0807 # Protein_GI_number: 15831104 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 402 99.0 1e-112 MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDAL FSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQ LGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIIERVPLIVGRNPNNE HYLDTKAEKMGHLLNK >gi|296918701|gb|GG772999.1| GENE 24 25700 - 26464 422 254 aa, chain + ## HITS:1 COG:ECs1851 KEGG:ns NR:ns ## COG: ECs1851 COG0671 # Protein_GI_number: 15831105 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 439 98.0 1e-123 MRSIARRTAVGAALLLVMPVAVWLSGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLIL FGWFLWCLRFRIKAAIMLFAILAAAILMGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDE FYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWP RRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAAATWLAQRICGPLTPP AEENREIAQREQES >gi|296918701|gb|GG772999.1| GENE 25 26613 - 26921 201 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46133578|ref|ZP_00203203.1| COG3771: Predicted membrane protein [Haemophilus influenzae R2866] # 1 89 2 90 97 82 35 1e-14 MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLIC GLFWLRVRVSLARAERKIKRLENQLSPATDVAVAPHSSASKE >gi|296918701|gb|GG772999.1| GENE 26 26928 - 28097 1158 389 aa, chain + ## HITS:1 COG:ECs1853 KEGG:ns NR:ns ## COG: ECs1853 COG2956 # Protein_GI_number: 15831107 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosaminyl transferase # Organism: Escherichia coli O157:H7 # 10 389 10 389 389 721 100.0 0 MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVNFLLSNQQDKAVDLFLD MLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAIQQLGRDYMAA GLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIA HFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRV ISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAVEENTGADAELMLADIIEARDGSEA AQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEKVRSKPRYRCQKC GFTAYTLYWHCPSCRAWSTIKPIRGLDGL >gi|296918701|gb|GG772999.1| GENE 27 28289 - 29026 598 245 aa, chain + ## HITS:1 COG:ECs1854 KEGG:ns NR:ns ## COG: ECs1854 COG0284 # Protein_GI_number: 15831108 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 448 99.0 1e-126 MTLTASSSSRAVTNSPVVVALDYHNRDAAMAFVDKIDPRDCRLKVGKEMFTLFGPQFVRE LQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKD APLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVF GQEFKLVTPGIRPQGSDAGDQRRIMTPEQALAAGVDYMVIGRPVTQSVDPAQTLKAINAS LQRSA >gi|296918701|gb|GG772999.1| GENE 28 29026 - 29352 514 108 aa, chain + ## HITS:1 COG:yciH KEGG:ns NR:ns ## COG: yciH COG0023 # Protein_GI_number: 16129243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 1 (eIF-1/SUI1) and related proteins # Organism: Escherichia coli K12 # 1 108 2 109 109 174 98.0 3e-44 MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVALDDAEL TKLAAELKKKCGCGGAVKDGIIEIQGDKRDLLKSLLEAKGMKVKLAGG >gi|296918701|gb|GG772999.1| GENE 29 29478 - 29696 362 72 aa, chain - ## HITS:1 COG:no KEGG:G2583_1624 NR:ns ## KEGG: G2583_1624 # Name: osmB # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 72 1 72 72 74 100.0 1e-12 MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGA AVGGVIGHQVGK >gi|296918701|gb|GG772999.1| GENE 30 29965 - 30714 644 249 aa, chain - ## HITS:1 COG:ECs1857 KEGG:ns NR:ns ## COG: ECs1857 COG1349 # Protein_GI_number: 15831111 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 249 1 249 249 477 99.0 1e-134 MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKLSYLRRAHGFAVSLDSD DVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSSY IAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHFSKAFIGIDGWQPETGFTGRD MMRTDVVNAVLEKECEAIVLTDSSKFGAVHSYSIGPVERFNRVITDSKIRASDLMHLEQS KLTVHVVDI >gi|296918701|gb|GG772999.1| GENE 31 30804 - 30977 215 57 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1446 NR:ns ## KEGG: EC55989_1446 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 57 15 71 71 105 100.0 4e-22 MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVAESTPDIPKAPWEI >gi|296918701|gb|GG772999.1| GENE 32 31125 - 33110 1385 661 aa, chain - ## HITS:1 COG:yciR_3 KEGG:ns NR:ns ## COG: yciR_3 COG2200 # Protein_GI_number: 16129246 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 401 660 1 260 261 525 99.0 1e-148 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTEITEPDRILQLSAEQAARIREMTVI TSSLMMSLTVDESDLSVHLVGRKINKREWGGNASAWHDTPAVARDLSHGLSFAEQVVSEA HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG NAYEVELWIPTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD SITGLPNRNAMQELIDHAINQADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI LSCLEHDQVLARPGGDEFLVLASNTSQSALEALASRILTRLRLPFRIGLIEVYTSCSVGI SLSPEHGSDSAAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND ELALSVIQQFSRLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR T >gi|296918701|gb|GG772999.1| GENE 33 33344 - 35278 1965 644 aa, chain - ## HITS:1 COG:rnb KEGG:ns NR:ns ## COG: rnb COG4776 # Protein_GI_number: 16129247 # Func_class: K Transcription # Function: Exoribonuclease II # Organism: Escherichia coli K12 # 1 644 1 644 644 1276 99.0 0 MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI IAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPDHPLLKDAIPCRAARGLNH EFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT EMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDGKLQLIVAIADPTAWIAEGSK LDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTFSTDGTIEDNIEF FAATIESKAKLVYDQVSDWLENTGDWQPESEAIAEQVRLLAQICQRRGEWRHNHALVFKD RPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFD PANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRM AERDVGDWLYARFLKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDE LVCSQENGTVQIKGETAYKVTDVIDVTIAEVRMETRSIIARPVA >gi|296918701|gb|GG772999.1| GENE 34 35346 - 36473 353 375 aa, chain - ## HITS:1 COG:yciW_1 KEGG:ns NR:ns ## COG: yciW_1 COG4950 # Protein_GI_number: 16129248 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 210 27 236 236 403 95.0 1e-112 MEQRHITGKSHWYHETQSSTAEYDVLPLVPEAAKVSDPFLLDVILDEETLAPFLSWLVPA RVLAVELFPDPLTVTRSQTFTAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSSRE SNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTVCDCVIINQIIGFIGFQARTIATF QAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLANTL SLHPISLSLLEKLLNSTRVNTQPGNLLAALLCARINGSPACFAACMNSSNEYKKISPLLR KGENEINRWADRHSVERATVQAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGL CGWINRLKIALGETY >gi|296918701|gb|GG772999.1| GENE 35 36618 - 37406 1041 262 aa, chain - ## HITS:1 COG:ECs1861 KEGG:ns NR:ns ## COG: ECs1861 COG0623 # Protein_GI_number: 15831115 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 506 100.0 1e-143 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDIS SYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI SGEVVHVDGGFSIAAMNELELK >gi|296918701|gb|GG772999.1| GENE 36 37884 - 38450 486 188 aa, chain + ## HITS:1 COG:ECs1862 KEGG:ns NR:ns ## COG: ECs1862 COG1309 # Protein_GI_number: 15831116 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 342 99.0 3e-94 MTSKLEIRHKQRQDEIINAARRCFRRCGFHAASMSQIASEAQLSVGQIYRYFANKDAIIE EMVRRIIDFRIAQMDIDARTDHFPEVLALRKSLNEDDDALMLEVAAEATRNPRVMAMLEE ADARMFANGCAHMKRMHPHLSDEHIRCCVEVFATMMEGTVYRRLTPQKSDPQHLQEIYQD IVSMLINK >gi|296918701|gb|GG772999.1| GENE 37 38599 - 39720 1066 373 aa, chain + ## HITS:1 COG:ECs1863 KEGG:ns NR:ns ## COG: ECs1863 COG0845 # Protein_GI_number: 15831117 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 373 1 373 373 605 98.0 1e-173 MKYIATSVVAMLLLSGCDNTQSNNSSPSETEVGVVTLKSQPVSVVSELTGRTSAALSAEV RPQVGGIIQKRLFKEGDLVKAGQPLYQIDAASYQAAWNEARAALQQAQALVKADCQKAQR YTRLVKENGVSQQDADDAQSTCAQDKASVEAKKAALETARINLDWTTVTAPISGRIGISS VTPGALVTASQDTALTTIRGLDTMYVDLTRSSVDLLRLRKQSLATNSDTMSVSLILEDGT TYSEKGRLELTEVAVDESTGSVTLRAIFPNPQQQLLPGMFVRARVDEGVMEDAILAPQQG VTRDAKGNATALVVNKDNKVEQRTLETGETYGDKWLVLNGLHNGDRLIVEGSAKVTSGQT VKAVEVQANGGNA >gi|296918701|gb|GG772999.1| GENE 38 39720 - 42827 2552 1035 aa, chain + ## HITS:1 COG:ECs1864 KEGG:ns NR:ns ## COG: ECs1864 COG0841 # Protein_GI_number: 15831118 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 979 1 977 1027 1825 99.0 0 MFSRFFVRRPVFAWVIAILIMLAGILAIRTLPVAQYPDVAPPTIKISATYTGASAETLEN SVTQVIEQQLTGLDNLLYFSSTSSSDGSVSINVTFEQGTDPDTAQVQVQNKIQQAESRLP SEVQQTGVTVEKSQSNFLLIAAVYDTTDKASSSDIADWLVSNVQDPLARVEGVGSLQVFG AEYAMRIWLDPAKLASYSLMPSDVQSAIEAQNVQVTAGKIGALPSPNTQQLTATVRAQSR LQTVDQFKNIIVKSQSDGAVVRIKDVARVEMGSEDYTAIGKLNGHPSAGVAVMLSPGANA LNTATLVKDKIAEFQRNMPQGYDIAYPKDSTEFIKISVEDVIQTLFEAIVLVVCVMYLFL QNLRATLIPALAVPVVLLGTFGVLALFGYSINTLTLFAMVLAIGLLVDDAIVVVENVERI MRDEGLPAREATEKSMGEISGALVAIALVLSAVFLPMAFFGGSTGVIYRQFSITIISAML LSVVVALTLTPALCGSVLQHVPPHKKGFFGAFNRFYRRTEDKYQRGVIYVLRRAARTMGL YVVLGGGMALMMWKLPGSFLPTEDQGEIMVQYTLPAGATAARTAEVNRQIVDWFLINEKA NTDVIFTVDGFSFSGSGQNTGMAFVSLKNWSQRKGAENTAQAIALRATKELGTIRDATVF AMTPPAVDGLGQSNGFTFELLANGGADRETLLQMRNQLIEKANQSPELHSVRANDLPQMP QLQVDIDSNKAVSLGLSLNDVTDTLSSAWGGTYVNDFIDRGRVKKVYIQGDSEFRSAPSD LGKWFVRGSDNAMTPFSAFATTRWLYGPERLVRYNGSAAYEIQGENATGFSSGDAMTKME ELANSLPAGTTWAWSGLSLQEKLASGQALSLYAVSILVVFLCLAALYESWSVPFSVILVI PLGLLGAALAAWMRDLNNDVYFQVALLTTIGLSSKNAILIVEFAEAAVAEGYSLSRAALR AAQTRLRPIIMTSLAFIAGVMPLAIATGAGANSRIAIGTGIIGGTLTATLLAIFFVPLFF VLVKRLFAGKPRRQE >gi|296918701|gb|GG772999.1| GENE 39 42831 - 44204 463 457 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 48 452 45 455 460 182 29 5e-45 MLRRSLIFLVLLSAGCVSLDPHYSTPESPIPATLPGAQGQGKAISHDWQQVIHDPRLQQV VTIALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRSLANGTGTTAEADG TVSSYTLDLFGRNQSLSRAARETWLASEFTAQNTRLTLIAEISTAWLTLAADNSNLALAK ETMASAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARASVASYQTQVMQDKNALNLLAG TTLAENLLPGTLESLPEQMISLVPAGVSSDVLLRRPDIQEAEHNLKSANADIGAARANFF PTISLTASAGVGSDALSSLFSHGMQIWSFAPSVTLPLFTGGSNLAQLRYAEAQKRGLIAT YEKTVQSAFKDVANALARRTTLEEQLDAQRQYVKAEQQTVDVGLRRYQAGVGDYLTVLTA QRSLWSAQQELLALQLTDFTNRITLWQSLGGGMSSLK >gi|296918701|gb|GG772999.1| GENE 40 44213 - 45376 840 387 aa, chain + ## HITS:1 COG:ECs1866 KEGG:ns NR:ns ## COG: ECs1866 COG0477 # Protein_GI_number: 15831120 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 387 1 387 387 627 98.0 1e-179 MARVSLSWALILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQL LFGPLSDKIGRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIA RDKYQGVTLTQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCLL FINETLPENKRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFS PMQFSLVFGLNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLTVLCAWVQLPIP ALVALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMSMFVFGGIAAPLSGIGGET LLKMSLAITVCYTLALLVALTRIDNQK >gi|296918701|gb|GG772999.1| GENE 41 45424 - 46242 448 272 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 256 3 263 329 177 35 3e-43 RKSEMIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTL AKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLR LNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADE ALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTA DVLASPLHELTKRLIAGHFGEALTADAWRKDR >gi|296918701|gb|GG772999.1| GENE 42 46232 - 47224 468 330 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 14 321 31 324 329 184 37 1e-45 MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDN WRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWT YKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLL IADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQTVET APSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGPRCPY AQRECIVTPRLTGAKNHLYACHFPLNMEKE >gi|296918701|gb|GG772999.1| GENE 43 47224 - 48114 980 296 aa, chain - ## HITS:1 COG:sapC KEGG:ns NR:ns ## COG: sapC COG4171 # Protein_GI_number: 16129253 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Escherichia coli K12 # 1 296 1 296 296 535 100.0 1e-152 MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLG YQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFA GATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSM VHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLG AQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE >gi|296918701|gb|GG772999.1| GENE 44 48101 - 49066 583 321 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 1 318 1 317 320 229 34 6e-59 MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAWVFWFNGLIHWDFGVSS INGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGITRHKWQDNLINAIALLGFS IPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFALIDAWLSNSPWRDEMVMSAI RHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRGLSRFTILRRHVLHNALPP VIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVCGSLVIIVNV ISDILGAMANPLKHKEWYALR >gi|296918701|gb|GG772999.1| GENE 45 49063 - 50706 1404 547 aa, chain - ## HITS:1 COG:sapA KEGG:ns NR:ns ## COG: sapA COG4166 # Protein_GI_number: 16129255 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 547 1 547 547 1066 98.0 0 MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQVNTFNPSKASSGLIVDT LAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRRDVPFQKTDWFTPTRKMNA DDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSVRKLDNHTVEFRLTQPDASFL WHLATHYASVMSAEYAGKLEKEDRQEQLDRQPVGTGPYQLSEYRAGQYIRLQRHDDFWRG NPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAASQLSILRDDPRLRLTLRPGMNVAYL AFNTAKPPLNNPAVRHALALAINNQRLMQSIYYGTAETAASILPRASWAYDNEAKITEYN PEKSREQLKALGLENLTLKLWVPTRSQAWNPSPLKTAELIQADMAQVGVKVVIVPVEGRF QEARLMDMSHDLTLSGWATDSNDPDSFFRPLLSCAAIHSQTNLAHWCDPKFDSVLRKALS SQQLAARIEAYDEAQSILAQELPILPLASSLRLQAYRYDIKGLVLSPFGNASFAGVYREK QDEVKKP >gi|296918701|gb|GG772999.1| GENE 46 51019 - 51264 282 81 aa, chain - ## HITS:1 COG:no KEGG:SDY_1637 NR:ns ## KEGG: SDY_1637 # Name: ymjA # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 81 1 81 81 144 100.0 1e-33 MNHDIPLKYFDIADEYATECAEPVADAERTPLAHYFQLLLTRLMNNEEISEEAQHEMAAE AGINPVRIDEIAEFLNQWGNE >gi|296918701|gb|GG772999.1| GENE 47 51691 - 52668 921 325 aa, chain - ## HITS:1 COG:ECs1880 KEGG:ns NR:ns ## COG: ECs1880 COG1221 # Protein_GI_number: 15831134 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 325 6 330 330 633 98.0 0 MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPF ISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKL LRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLR ERESDIMLMAEHFAIQMCREIKLPLFPGFTEHARETLLNYRWPGNIRELKNVVERSVYRH GTSDYPLDDIIIDPFKRRPSEEAIAVSENTSLPTLPLDLREFQMQQEKELLQLSLQQGKY NQKRAAELLGLTYHQFRALLKKHQI >gi|296918701|gb|GG772999.1| GENE 48 52834 - 53502 988 222 aa, chain + ## HITS:1 COG:ECs1881 KEGG:ns NR:ns ## COG: ECs1881 COG1842 # Protein_GI_number: 15831135 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 281 98.0 9e-76 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRR IEQASAREIEWQEKAELALLKDREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLVRMKK EIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEA EAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMKQDNQ >gi|296918701|gb|GG772999.1| GENE 49 53556 - 53780 309 74 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_1656 NR:ns ## KEGG: ECIAI39_1656 # Name: pspB # Def: phage shock protein B # Organism: E.coli_IAI39 # Pathway: not_defined # 1 74 1 74 74 127 100.0 1e-28 MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLAQLADEAKRMRERIQAL ESILDAEHPNWRDR >gi|296918701|gb|GG772999.1| GENE 50 53780 - 54139 523 119 aa, chain + ## HITS:1 COG:ECs1883 KEGG:ns NR:ns ## COG: ECs1883 COG1983 # Protein_GI_number: 15831137 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 226 99.0 1e-59 MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIIL SFALDPMPDNMVFGEQLPSSSELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL >gi|296918701|gb|GG772999.1| GENE 51 54148 - 54369 212 73 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_1658 NR:ns ## KEGG: ECIAI39_1658 # Name: pspD # Def: peripheral inner membrane phage-shock protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 73 1 73 73 112 100.0 7e-24 MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVARRPLKMLLAVALEPLL SRAANKLAQRYKR >gi|296918701|gb|GG772999.1| GENE 52 54444 - 54758 385 104 aa, chain + ## HITS:1 COG:pspE KEGG:ns NR:ns ## COG: pspE COG0607 # Protein_GI_number: 16129269 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 104 1 104 104 205 99.0 2e-53 MFKKGLLALTLVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAVPDKN DTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKVKG >gi|296918701|gb|GG772999.1| GENE 53 54941 - 56647 1121 568 aa, chain + ## HITS:1 COG:ycjM KEGG:ns NR:ns ## COG: ycjM COG0366 # Protein_GI_number: 16129270 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 568 1 568 568 1129 94.0 0 MGPLPRKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVL ITYADQFHSNDLKPLPTFNQFYPQWLQRIFSHVHLLPFYPWSSDDGFSVIDYHQVASEAG EWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQQPGFEDFFIAVDPKTDLSAVTRPR ALPLLTPFQMRDHSMRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLEKGAEYVRLDAV GFMWKEPGTNCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGEGDDEAH MVYQFSLPPLVLHAVQKQNVEALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPE NEILALVEVLQQEGALVNWKNNPDGTRSPYEMNVTYMDALSRRECSDEERCARFILAHAI LLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYSSKEITTELNNKATLSYSVYY KLSHLITLRRSHKEFHPDNNFTIDAINSFVMRIQRSNADGDCLTGLFNVSENIQHINITD LHGRDLISEVDILGNEITLHPWQVMWIK >gi|296918701|gb|GG772999.1| GENE 54 56661 - 57953 1450 430 aa, chain + ## HITS:1 COG:ycjN KEGG:ns NR:ns ## COG: ycjN COG1653 # Protein_GI_number: 16129271 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 430 1 430 430 805 97.0 0 MIKSKIVLLSALVSCTLISGCKEENKNNVSIEFMHSSVEQERQAVISKLIARFEKENPGI TVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRQAVATVISNVGEG AFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLND PANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRNLAAN TMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTS LTITAGQKAEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKA LGELPNQLISELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLPGTLQASQ KKLDELIEQH >gi|296918701|gb|GG772999.1| GENE 55 57974 - 58855 990 293 aa, chain + ## HITS:1 COG:ycjO KEGG:ns NR:ns ## COG: ycjO COG1175 # Protein_GI_number: 16129272 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 1 293 1 293 293 486 99.0 1e-137 MNRLFSGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIEATFVGVSNY VRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPS ISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFI SFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYL LTTKVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILLTRKRVNLNGNK >gi|296918701|gb|GG772999.1| GENE 56 58842 - 59684 850 280 aa, chain + ## HITS:1 COG:ycjP KEGG:ns NR:ns ## COG: ycjP COG0395 # Protein_GI_number: 16129273 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Escherichia coli K12 # 1 280 1 280 280 455 98.0 1e-128 MATNKRTLSRIGFYCGLALFLIITLFPFFVILMTSFKSAKEAISLHPTLLPQQWTLEHYV DIFNPVIFPFVDYFRNSMVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMF SGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDG LNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTP DYIWGRMMAASLVTALPVVIMYALSEHFIKSGLTAGGVKG >gi|296918701|gb|GG772999.1| GENE 57 59715 - 60767 1269 350 aa, chain + ## HITS:1 COG:ycjQ KEGG:ns NR:ns ## COG: ycjQ COG1063 # Protein_GI_number: 16129274 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 350 1 350 350 691 98.0 0 MKKLVATAPRVAALVEYEERAILANEVKIRVRFGAPKHGTEVVDFRAASPFINDDFNGEW QMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVNDYAVGDSVCGYGPLSETVIINAV NNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDFVVVVGLGAIGQIAIQLAKRA GASVVIGVDPIAHRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRI EETCWELLMNGYLNCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVTF >gi|296918701|gb|GG772999.1| GENE 58 60786 - 61574 943 262 aa, chain + ## HITS:1 COG:ycjR KEGG:ns NR:ns ## COG: ycjR COG1082 # Protein_GI_number: 16129275 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Escherichia coli K12 # 1 262 4 265 265 543 99.0 1e-155 MKIGTQNQAFFPENILEKFRYIKEMGFDGFEIDGKLLVNNLEEVKAAIKETGLPVTTACG GYDGWIGDFIEERRLNGLKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDG DRKMVSDSLRVLEQVAARTGTVVYLEPLNRYQDHMINTLADARRYIVENDLKHVQIIGDF YHMNIEEDNLAQALHDNRDLLGHVHIADNHRYQPGSGTLDFHALFEQLRADNYQGYVVYE GRIRAENPAQAYRDSLAWLRTC >gi|296918701|gb|GG772999.1| GENE 59 61596 - 62639 878 347 aa, chain + ## HITS:1 COG:ycjS KEGG:ns NR:ns ## COG: ycjS COG0673 # Protein_GI_number: 16129276 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 347 5 351 351 721 98.0 0 MTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDP QAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTAEQAREMCDTARKQGK VLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLI DIGIHMLDAAMYVLGFPAVKSVTAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFH NGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMADDNR HLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL >gi|296918701|gb|GG772999.1| GENE 60 62705 - 64903 1592 732 aa, chain + ## HITS:1 COG:ycjT KEGG:ns NR:ns ## COG: ycjT COG1554 # Protein_GI_number: 16129277 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Escherichia coli K12 # 1 732 24 755 755 1456 97.0 0 MAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDVVGMEIAINGEIF SLSREAWQRELNFASGELRRNVVWRTSNGAGYTITSRRFVSADQLPLIALEITITPLDAD ALVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCKVSGDVQ QCYTAKERRLLQHTCAQLHAGETLTLQKRVWIDWRDDRQAALDEWGSASLRQLEMCAQQS YDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHDERSSIAAKGLT GEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWES ARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADIAWAVIQYWRTTGDESFIAHEGMA LLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNNNAFTSYMAYYNVQQALNIARQFG CSDDAFIHRAEMYLKELLLPEIQPDGVLPQDDSFMAKPVINLAKYKAAAGKQTILLDYSR AEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCG LLTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPAL PEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLRLNGQLIYVAEESVFCLGDFILP FNGTATTHQEGE >gi|296918701|gb|GG772999.1| GENE 61 64900 - 65559 440 219 aa, chain + ## HITS:1 COG:ECs1896 KEGG:ns NR:ns ## COG: ECs1896 COG0637 # Protein_GI_number: 15831150 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 421 96.0 1e-118 MKLQGVIFDLDGVITDSAHLHFQAWQQIAAEIGISIDAQFNEFLKGISRDESLRRILQHG GKEGDFNPQERAQLAYRKNLLYVHSLRELTVNAVLPGIHNLLVDLRAQQIPVGLASVSLN APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIEAI NASGMRSVGIGAGLTGAQLLLPSTDSLTWPRLSAFWQNV >gi|296918701|gb|GG772999.1| GENE 62 65573 - 66655 1077 360 aa, chain + ## HITS:1 COG:ECs1897 KEGG:ns NR:ns ## COG: ECs1897 COG3839 # Protein_GI_number: 15831151 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 359 1 359 360 714 99.0 0 MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGD LLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAREVIDERVNWAAQ ILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKL HQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVAGFIGSPAM NFIRGTIDGDKFVTETLKLTIPEEKLAVLKTQESLHKPIVMGIRPEDIHPDAQEENNISA KISVAELTGAEFMLYTTVGGHELVVRAGALNDYHAGENITIHFDMTKCHFFDAETEIAIC >gi|296918701|gb|GG772999.1| GENE 63 66700 - 67605 998 301 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C1590 NR:ns ## KEGG: UTI89_C1590 # Name: ompG # Def: outer membrane protein G # Organism: E.coli_UTI89 # Pathway: not_defined # 1 301 18 318 318 598 99.0 1e-170 MKKLLLCTALVMCAGMACAQAEEKNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAA NGPWRISLAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLESDDFSFGLTGGFRNYGYHYV DEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGPQY TFNETLALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSN WDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYS F >gi|296918701|gb|GG772999.1| GENE 64 67656 - 68654 843 332 aa, chain - ## HITS:1 COG:ycjW KEGG:ns NR:ns ## COG: ycjW COG1609 # Protein_GI_number: 16129281 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 332 1 332 332 622 96.0 1e-178 MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEELQYQPNKLARALTSSGF DAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQTSHNLAEDLHKCESKIKQK MIKGIIMLSSPADESFFAQLDKYDIPVVVIGKVEGQYSHVYSVDTDNYGDSIALTDALIE SGHKNIACLHAPLDVHVSVDRVNGYKQSLATHNIAVRDEWIVDGGYTHETALKAARELLS QSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAVVGYSNETLSFILTPAPGGIDVPTQ ELGQRSCELLFQLIAGKPSPQNITVATHMSLK >gi|296918701|gb|GG772999.1| GENE 65 68810 - 70207 1175 465 aa, chain + ## HITS:1 COG:ECs1900 KEGG:ns NR:ns ## COG: ECs1900 COG3106 # Protein_GI_number: 15831154 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 465 1 465 465 961 99.0 0 MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVRE ERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRH FKDTSTLYLEIVDYPGEWLLDLPMLAQDYFSWSRQMTGLLNGQRGEWSAKWRMMCEGLDP LAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDAWG ESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFN DMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQD AWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARL PGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR >gi|296918701|gb|GG772999.1| GENE 66 70204 - 71265 1137 353 aa, chain + ## HITS:1 COG:ycjF KEGG:ns NR:ns ## COG: ycjF COG3768 # Protein_GI_number: 16129283 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 353 1 353 353 660 100.0 0 MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDEAQEEEGQVEAVMDAAL RPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVALGGCAAGALIIGAGVGSVV TEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQQAGIDQSHPALQRWYASIHE TQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMIAVSPLALVDMAFIAWRNLRLIN RIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRAAQGIG AGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRRQLIGQVKETLQKGKTPSEK >gi|296918701|gb|GG772999.1| GENE 67 71413 - 72954 1442 513 aa, chain + ## HITS:1 COG:ECs1902 KEGG:ns NR:ns ## COG: ECs1902 COG3283 # Protein_GI_number: 15831156 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of aromatic amino acids metabolism # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 1009 99.0 0 MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFAELEFESFSSLMAEIRR IAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKVDMANPASCQLFGQKLDRL RNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLMEITPVYLQDENDQHVLTGAVV MLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVEQAQKLAMLSAPLLITGDTGTGK DLFAYACHQASPRASKPYLALNCASIPEDAVESELFGHAPEGKKGFFEQANGGSVLLDEI GEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGVFREDLYYRL NVLTLNPPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRYAWPGNVRQLK NAIYRALTQLDGYELRPQDILLPDYDAATVAVGEDAMEGSLDEITSRFERSVLTQLYRNY PSTRKLAKRLGVSHTAIANKLREYGLSQKKNEE >gi|296918701|gb|GG772999.1| GENE 68 72998 - 73504 669 168 aa, chain - ## HITS:1 COG:ECs1903 KEGG:ns NR:ns ## COG: ECs1903 COG2077 # Protein_GI_number: 15831157 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 168 1 168 168 310 100.0 9e-85 MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGV CAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGV AIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA >gi|296918701|gb|GG772999.1| GENE 69 73623 - 74588 882 321 aa, chain + ## HITS:1 COG:ECs1904 KEGG:ns NR:ns ## COG: ECs1904 COG4948 # Protein_GI_number: 15831158 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli O157:H7 # 1 321 15 335 335 588 98.0 1e-168 MRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELEEEGIKGTGECTPYPRYGESDASVMA QIMSVVPQLEKGLTREELQKILPAGAARNALDCALWDLAARKQQQSLADLIGITLPETVT TAQTIVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISERMVAIRTAVPDATLIVDANES WRAEGLAARCQLLADLGVAMLEQPLPAQDDAALENFIHPLPICADESCHTRSNLKALKGR YEMVNIKLDKTGGLTEALALATEARAQGFRLMLGCMLCTSRAISAALPLVPQVSFADLDG PTWLAVDVEPALQFTTGELHL >gi|296918701|gb|GG772999.1| GENE 70 74563 - 75291 388 242 aa, chain - ## HITS:1 COG:ECs1905 KEGG:ns NR:ns ## COG: ECs1905 COG2866 # Protein_GI_number: 15831159 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 242 21 262 262 486 99.0 1e-137 MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASHESGLILAGTHGDENSSIVTLS CALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFPAANWKEGETVYRWNSAAE ERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPLACIEDPRHSELGEWLAQAFE LPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDEASEKYLFAMANLLRWHPKDAIR PS >gi|296918701|gb|GG772999.1| GENE 71 75582 - 76220 510 212 aa, chain - ## HITS:1 COG:ECs1906 KEGG:ns NR:ns ## COG: ECs1906 COG0702 # Protein_GI_number: 15831160 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 212 9 220 220 419 98.0 1e-117 MNNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAAL KQAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNNA VIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAA LITDIIDKPEKHIGENIGINQPGTDGDKPFFM >gi|296918701|gb|GG772999.1| GENE 72 76217 - 76291 60 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKHIQIRNSDMAWHIAANNLGKVS >gi|296918701|gb|GG772999.1| GENE 73 76291 - 77208 876 305 aa, chain - ## HITS:1 COG:ECs1909 KEGG:ns NR:ns ## COG: ECs1909 COG1073 # Protein_GI_number: 15831163 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli O157:H7 # 1 305 6 310 310 575 98.0 1e-164 MNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYPAIVVSHPGGGVKEQTAGTYAEKLAEK GFVTIAYDASYQGESGGEPRQLENPYIRTEDVSAVIDYLTTLSYVDNTRIGAMGICAGAG YTANAAIQDRRIKAIGTVSAVNIGSMFRNGWENNVKSIDALPYVDAGSNARTSDISSGEY ATMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYL TQPIQIVAGSQAGSKCMSDDLYDRASSQDKRYHIVEGANHMDLYDGKVYVAEAISVLAPF FEETL >gi|296918701|gb|GG772999.1| GENE 74 77349 - 78248 194 299 aa, chain + ## HITS:1 COG:ycjZ KEGG:ns NR:ns ## COG: ycjZ COG0583 # Protein_GI_number: 16129289 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 299 1 299 299 562 98.0 1e-160 MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEERLGLRLLTRTTRSVVP TEAGEHLLSVLGPMLHDIDSALTSLSDLQNRPSGTIRITTVEHAAKTILLPAMRTFLKSH PEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRIGPDIPMAIVGSPDYFSRRSA PTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVRMEGQLLLNTIDLIIDAAIDGHG LAYLPYDQVERAIKGKKLIRVLDKFTPDLPGYHLYYPHRRHAGSAFSLFIDRLKYKGAV >gi|296918701|gb|GG772999.1| GENE 75 78585 - 80198 1248 537 aa, chain + ## HITS:1 COG:mppA KEGG:ns NR:ns ## COG: mppA COG4166 # Protein_GI_number: 16129290 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 537 8 544 544 1060 99.0 0 MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDEPASLDPAKAVGLPEIQ VIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNAKWADGTPVTAQDFVYSWQ RLVDPKTLSPFAWFAALAGINNAQAIIDGKAAPDQLGVTAVDAHTLKIQLDKPLPWFVNL TANFAFFPVQKANVESSKEWTKPGNLIGNGAYVLKERVVNEKLVVVPNTHYWDNAKTVLQ KVTFLPINQESAATKRYLAGDIDITESFPKNMYQKLLKDIPGQVYTPPQLGTYYYAFNTQ KGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPAWHFTPDVTAGFTPEPSPFEQMSQEEL NAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQKIAIAVASMWKKNLGVDVKLQNQEWKTY IDSRNTGNFDVIRASWVGDYNEPSTFLTLLTSTHSGNISRFNNPAYDKVLAQASTENTVK ARNADYNAAEKILMEQAPIAPIYQYTNGRLIKPWLKGYPINNPEDVAYSRTMYIVKH >gi|296918701|gb|GG772999.1| GENE 76 80249 - 81280 781 343 aa, chain - ## HITS:1 COG:ECs1912 KEGG:ns NR:ns ## COG: ECs1912 COG0668 # Protein_GI_number: 15831166 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 343 1 343 343 667 99.0 0 MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSI INYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSR IIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFS IGDWIRSPDRNIEGTVTEIGWRITKIKTFDNRPLYVPNSLFSSISVENPGRMTNRRITTT IGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWA EWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPDQGR >gi|296918701|gb|GG772999.1| GENE 77 81524 - 81781 329 85 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_1452 NR:ns ## KEGG: ECDH10B_1452 # Name: ynaJ # Def: inner membrane protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 85 1 85 85 132 100.0 5e-30 MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMI FVYSLVFTVLLAIPLGIYFLGGEEQ >gi|296918701|gb|GG772999.1| GENE 78 81865 - 82815 1037 316 aa, chain - ## HITS:1 COG:ECs1914 KEGG:ns NR:ns ## COG: ECs1914 COG0589 # Protein_GI_number: 15831168 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 634 100.0 0 MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTTLLSPDERTAM RQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQEVISGGHDLVLKMAHQHD RLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAVNLASEEPYHNALNEKLVKET IELAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYNDAIRGQHLLAMKALRQKFGINE NMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK PDQYQTPVELDDEEDD >gi|296918701|gb|GG772999.1| GENE 79 82967 - 83719 802 250 aa, chain - ## HITS:1 COG:ECs1915 KEGG:ns NR:ns ## COG: ECs1915 COG0664 # Protein_GI_number: 15831169 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 501 100.0 1e-142 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA QLAGHTRNVA >gi|296918701|gb|GG772999.1| GENE 80 83914 - 84429 345 171 aa, chain - ## HITS:1 COG:ogt KEGG:ns NR:ns ## COG: ogt COG0350 # Protein_GI_number: 16129296 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Escherichia coli K12 # 1 171 1 171 171 348 100.0 2e-96 MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDIHYRKEGYERISATNPG GLSDKLREYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPCGQVMHYGQLAEQLGRPGA ARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKEWLLRHEGYLLL >gi|296918701|gb|GG772999.1| GENE 81 84961 - 85776 271 271 aa, chain - ## HITS:1 COG:RSc3062 KEGG:ns NR:ns ## COG: RSc3062 COG2207 # Protein_GI_number: 17547781 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Ralstonia solanacearum # 10 258 18 260 268 157 36.0 2e-38 MTITLQPKASPGHHIIGLDSEHLNGGTVPWHKHLYAQLLYPAEGVVRVWAGESVWLVHAS SALWLPPQMPHKFVATGNVLLKTVLVSEAESETLGKVCFMTGISPLLRELLIAINQLPPS QSTTDKQQLRFSALETLILQEIKMGVKMSLELPWPNDERLQQLCENLLNNQGYLPTLDNL ADKINVSSRTLMRLFVKETGLTFRHWVQQMHVISAVTLLDDGYSLTKIAHRLGYASAESF GNMFKRRTGYSPGKFTRRLTMHDYAITRQMI >gi|296918701|gb|GG772999.1| GENE 82 85873 - 86901 395 342 aa, chain + ## HITS:1 COG:mll2590 KEGG:ns NR:ns ## COG: mll2590 COG1566 # Protein_GI_number: 13472330 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Mesorhizobium loti # 13 340 37 363 367 246 43.0 4e-65 MIISKKQLIGVVAIGILLAGVVFFIWWVSKGRFIQTTDDAYIGGNITTVASKVSGYISAI EVRDNQSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATIAMQQSIIQSASET WQAVKHEEQKRLRDTERYEKLAQSAAISQQIIDNARFDYQQVAAKERKAANDFLVEKQRL AVLSAQEENVRASIEEVQAALTQALLDLEYTLVRAPIDGIVANRSAHTGSWVEGGTSLVS LVPVSELWVDANYKENQIAGMKPGMKAEIRADILKGEVFHGHIESLSPATGASFSLIPIE NATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSVDER >gi|296918701|gb|GG772999.1| GENE 83 86907 - 88412 633 501 aa, chain + ## HITS:1 COG:mll2589 KEGG:ns NR:ns ## COG: mll2589 COG0477 # Protein_GI_number: 13472329 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 5 495 13 503 518 499 53.0 1e-141 MRKHIAFASMCIGLFIAQLDIQIVSSSLNEIGGGLSAGKDEMAWLQTSYLIAEIIVIPLS GWLSRVFSTRWLFTLSAGIFTLMSIACGLAWNIQIMIFFRALQGVAGASMIPLVFTTAFI YYQGKELGLAAAVVSALASLSPTLEPTLGGWITDNLDWRWLFYINILPGIYLVLSIPFLV NFDKPDLSLLKVADYPSIILLAMTLGCLEYTLEEGARWGWLDDNTILLTSVLALVSFILF AARTLKISNPIMDLHAFKDKYFTLGCFFSFSGGVGIFSTVYLIPVFLGQVRGLNAEEIGF AVCTTGIFQLFSVPFYFWLSKKINLQWLLMAGLGGFVFSMYLFTPITHEWGWQELLFPQA IRGISQQFAMAPIVTLTLGGIPKERLKLASGVFNLTRNLGGASGIALCGSILNNRTNFHF SRMGEKMVSVPHTMNDFISRSALFFNRSGSDQTSEILASTKLLSQLMLREAQTMAFSDTF LLISGLLFIAFLLVPAMNKSS >gi|296918701|gb|GG772999.1| GENE 84 88607 - 89170 481 187 aa, chain + ## HITS:1 COG:ECs1924 KEGG:ns NR:ns ## COG: ECs1924 COG2840 # Protein_GI_number: 15831178 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 377 99.0 1e-105 MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQLDNFLTTGFLDIIPLSQ PLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMMFSFIQQALADGLRNVLII HGKGRDDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRKTAQAKQENWE RHAKRSR >gi|296918701|gb|GG772999.1| GENE 85 89191 - 90423 857 410 aa, chain - ## HITS:1 COG:ydaM_3 KEGG:ns NR:ns ## COG: ydaM_3 COG2199 # Protein_GI_number: 16129302 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 241 410 1 170 170 343 99.0 3e-94 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQLRTGPYSVSSQKELPK YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTEAEPVIIFEGIEAPATLGLKASRS ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA KVSISSLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA >gi|296918701|gb|GG772999.1| GENE 86 90732 - 91661 728 309 aa, chain + ## HITS:1 COG:ECs1926 KEGG:ns NR:ns ## COG: ECs1926 COG0598 # Protein_GI_number: 15831180 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Escherichia coli O157:H7 # 1 309 19 327 327 629 100.0 1e-180 MLDGRGGVKPLENTDVIDEAHPCWLHLNYVHHDSAQWLATTPLLPNNVRDALAGESTRPR VSRLGEGTLITLRCINGSTDERPDQLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGT GPTDCGGWLVDVCDALTDHSSEFIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMR RYMAPQRDVYARLASERLPWMSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQV MQENLARRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVA LWLHRSKWL >gi|296918701|gb|GG772999.1| GENE 87 92214 - 93512 1065 432 aa, chain + ## HITS:1 COG:ECs1927 KEGG:ns NR:ns ## COG: ECs1927 COG0513 # Protein_GI_number: 15831181 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 432 26 457 457 837 98.0 0 MTPVQDAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELAD QVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLD ALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAI EIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQSVCDVLNEVG QSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVH VHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTLPANSSIVPLEAEMATL CIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGK IKGKTCRVRLLK >gi|296918701|gb|GG772999.1| GENE 88 93641 - 94576 1028 311 aa, chain - ## HITS:1 COG:ECs1928 KEGG:ns NR:ns ## COG: ECs1928 COG0037 # Protein_GI_number: 15831182 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 641 99.0 0 MQENQQITKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILR NLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLETLGVEYKIVEENTYGIVKEKIPEGKT TCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDG KHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIE TMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGDLAFDREEIPLQPSGWQPEEDENQL DELRLNVVEVK >gi|296918701|gb|GG772999.1| GENE 89 94628 - 94936 125 102 aa, chain - ## HITS:1 COG:ECs1929 KEGG:ns NR:ns ## COG: ECs1929 COG0582 # Protein_GI_number: 15831183 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 27 102 336 411 411 168 100.0 2e-42 MLPHPVRVAQHQHAKQGFPIRFHYDYLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAG ANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQVAMLNARLS >gi|296918701|gb|GG772999.1| GENE 90 96445 - 96666 56 73 aa, chain - ## HITS:1 COG:STM2864 KEGG:ns NR:ns ## COG: STM2864 COG1108 # Protein_GI_number: 16766170 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 41 64 104 282 66 78.0 1e-11 MPLGIGAFIVGLFCAIATGYLKDNSIIKKDTIIGIVFSGIFVLTINRHKSADYRYHYYIT VYSAWYRLPFLPH >gi|296918701|gb|GG772999.1| GENE 91 96903 - 97337 468 144 aa, chain - ## HITS:1 COG:ECs1997 KEGG:ns NR:ns ## COG: ECs1997 COG0589 # Protein_GI_number: 15831251 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 144 25 168 168 259 100.0 1e-69 MNRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPA MDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDI TTYLLGSNAAAVVRHAECSVLVVR >gi|296918701|gb|GG772999.1| GENE 92 97478 - 98611 1251 377 aa, chain - ## HITS:1 COG:ompN KEGG:ns NR:ns ## COG: ompN COG3203 # Protein_GI_number: 16129338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 377 1 377 377 617 99.0 1e-177 MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYFSDNSAKDGDQSYARLG FKGETQINDQLTGYGQWEYNIQANNTESSTNQSWTRLAFAGLKFADYGSFDYGRNYGVMY DIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFFGLVNGLNFAVQYQGNNEGAS NGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAYTSSDRTNDQVNHTAAGGDKADA WTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVANKTQNFEVTAQYQFDFGLRPAVSFL MSKGRDLHAAGGADNPAGVDDKDLVKYADVGATYYFNKNMSTYVDYKINLLDEDDSFYAA NGISTDDIVALGLVYQF >gi|296918701|gb|GG772999.1| GENE 93 98977 - 102501 3258 1174 aa, chain - ## HITS:1 COG:ECs2000_1 KEGG:ns NR:ns ## COG: ECs2000_1 COG0674 # Protein_GI_number: 15831254 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Escherichia coli O157:H7 # 1 411 1 411 411 827 98.0 0 MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSE AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIF GDHSDVMAVRQTGCAMLCAASVQEAQDFALISHIATLKSRVPFIHFFDGFRTSHEINKIV PLADDTILELMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE QAMNDFAAATGRHYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRL YRPFSAKHLLQALPGSVRNVAVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVI GGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDVTNLSLPLPENTLPNSAKLEA LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL ISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSAAEVWSRLPQEVQAVLNQKKARF YVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVER NWQALALARESVEEVPLQPVNPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALP PDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPAS LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE KINYDFFLNLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML IANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRL LDQFADKIPTELLTALKSDATPEVRRAQVAALRQQLNDVAEAHELLRDADALVEKSIWLI GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQP EVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD >gi|296918701|gb|GG772999.1| GENE 94 102775 - 103041 182 88 aa, chain + ## HITS:1 COG:STM1649 KEGG:ns NR:ns ## COG: STM1649 COG3042 # Protein_GI_number: 16764993 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Salmonella typhimurium LT2 # 38 88 1 51 51 63 92.0 1e-10 MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEANCAMIGGSLSVARQLD GTAIGMCALPNGKRCSEQSLAAGSCGSY >gi|296918701|gb|GG772999.1| GENE 95 103038 - 103472 199 144 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163801140|ref|ZP_02195040.1| 50S ribosomal protein L25 [Vibrio campbellii AND4] # 1 144 1 147 147 81 29 2e-14 MRTTMKKVAALVALSLLMAGCVSSDKIAVTPEQLQHHRFVLESVNGKPVTSDKNPPEISF GEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCVNPQLNELDNTISEMLKEGAQVD LTANQLTLATAKQTLTYKLADLMN >gi|296918701|gb|GG772999.1| GENE 96 103571 - 104560 1215 329 aa, chain - ## HITS:1 COG:ECs2002 KEGG:ns NR:ns ## COG: ECs2002 COG1052 # Protein_GI_number: 15831256 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 669 100.0 0 MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANGCEAVCIFVNDDGSRPV LEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDPEAVAEHAIGMMMTLNRRI HRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLAFDPYPSAA ALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEAAFDQMKNGVMIVNTSRGALIDS QAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVIQDDVFRRLSACHNVLFTGHQAFLT AEALTSISQTTLQNLSNLEKGETCPNELV >gi|296918701|gb|GG772999.1| GENE 97 104768 - 107407 2091 879 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1497 NR:ns ## KEGG: ECS88_1497 # Name: ydbH # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 879 1 879 879 1697 100.0 0 MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRIALDESPRITRKGLIIP DLRYLVGDCQLAHITNASLSHPSRWLLSVGTVELDSACLAKLPQTEQSPAAPKTLAQWQS MLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLCYQGEKVKFQGQLKGQQLTVSELDV AAFENQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQEPSLVDAELDWQENSGQLIVLA RDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLSGRLGVKVDNWQAGLENALVSGRLS VLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTGEAKQADLILYARLPAQLSGSLSDPTL TFEPGALLRSKGRVIDSLDIDEIRWPLAGVKVTQRGVDGRLQAILQAHENELGDFVLHMD GLANDFLPDAGRWQWRYWGKGSFTPMNATWDVAGKGEWHDSTITLTDLSTGFDQLQYGTM TVEKPRLILDKPVVWGRDAQHPSFSGALSLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYF LFKGDLHAGEIGPVRVNGRWDGIRLRGNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQV AFSAAPEQGFRAGGHGVLKGGSAWMPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAE VINLVTAKNITADLQGRYPWTEEEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNL SSSELVSAVNPKQFAMSGAFSGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVK DNMTAGSAINWLRYMEISRSSTKINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEEN IFTLWRSLRFGDNLQAWLEQNARLPGNDCPQGKECEDKQ >gi|296918701|gb|GG772999.1| GENE 98 107404 - 107589 290 61 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_1769 NR:ns ## KEGG: EcSMS35_1769 # Name: not_defined # Def: putative lipoprotein # Organism: E.coli_SECEC # Pathway: not_defined # 1 61 1 61 61 101 100.0 1e-20 MKILLAALTSSFMLVGCTPRIEVAAPKEPITINMNVKIEHEIIIKADKDVEELLETRSDL F >gi|296918701|gb|GG772999.1| GENE 99 107654 - 107923 262 89 aa, chain + ## HITS:1 COG:ydbL KEGG:ns NR:ns ## COG: ydbL COG3784 # Protein_GI_number: 16129344 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 89 22 110 110 161 97.0 3e-40 MALTLDEARTQGRVGETFYGYLVALKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDI AKLAGQKLVERAKPGEYVQGINGKWVRKF >gi|296918701|gb|GG772999.1| GENE 100 108299 - 109247 388 316 aa, chain + ## HITS:1 COG:no KEGG:ECP_1410 NR:ns ## KEGG: ECP_1410 # Name: not_defined # Def: autotransporter beta-domain; region: autotransporter; cl02365 # Organism: E.coli_536 # Pathway: not_defined # 1 316 1 316 2458 473 98.0 1e-132 MQRKTLLSACIALALSGQGWAADITEIETTTGEKKNTNVTCPADPGKLSPEELKRLPSEC SSVVEQNLMPWLVTGAATALITTLAIVELNDDDDHHRNNSPLPPTPPDDDSDDTPVPPTP GGDEIIPDDGPDDTPTPPKPIAFNNDVILDKTEKTLTIRDSVFSYTENADGTISLQDSNG RKATINLWQIDETNNTVALEGMSADGATKWQYNHNGELVITGDNTTVNNTGKTIVDGKGA TGTEIAGNNAVVNQDGELDVSGGGHGIDITGDSATVDNKGGMTVTDPDSIGIQIDGDKAV VNKDGDSAISNGGTGT Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:44:18 2011 Seq name: gi|296918700|gb|GG773000.1| Escherichia coli MS 110-3 genomic scaffold Scfld98, whole genome shotgun sequence Length of sequence - 812 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 82 - 258 62 ## gi|300976683|ref|ZP_07173540.1| hypothetical protein HMPREF9531_01338 2 2 Tu 1 . - CDS 187 - 810 487 ## COG3596 Predicted GTPase Predicted protein(s) >gi|296918700|gb|GG773000.1| GENE 1 82 - 258 62 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300976683|ref|ZP_07173540.1| ## NR: gi|300976683|ref|ZP_07173540.1| hypothetical protein HMPREF9531_01338 [Escherichia coli MS 45-1] hypothetical protein HMPREF9531_01338 [Escherichia coli MS 45-1] # 1 58 18 75 75 102 89.0 7e-21 MQQKKYSFNYLIFNDDFIKRRILVNPATHPVGVSVSEQTIPQCFQQADNAVPGFTQKL >gi|296918700|gb|GG773000.1| GENE 2 187 - 810 487 207 aa, chain - ## HITS:1 COG:ECs1395 KEGG:ns NR:ns ## COG: ECs1395 COG3596 # Protein_GI_number: 15830649 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 207 86 289 290 125 33.0 4e-29 MTLVDLPGIGETPQHDQEYREIYRQLLPELDLIIWILRADERAYAADIAMHQFLLNEGAD PSRFLFVLSHADRVFPAEEWNATEKCPSRHQELSLATVTARVATLFPSSFPVLPVAAPVG WNLPAFVSLMIHALPPQATSAVYSHIRGENRSEQAQKHAQQTFGDAIGKSFDDAVARFTF PVWMLQLLRKARDRIIRLLETLWDRLF Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:44:23 2011 Seq name: gi|296918699|gb|GG773001.1| Escherichia coli MS 110-3 genomic scaffold Scfld104, whole genome shotgun sequence Length of sequence - 508 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 508 99.0 # CP000243 [D:230503..233406] # 23S ribosomal RNA # Escherichia coli UTI89 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:44:24 2011 Seq name: gi|296918698|gb|GG773002.1| Escherichia coli MS 110-3 genomic scaffold Scfld124, whole genome shotgun sequence Length of sequence - 896 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 5/0.000 + CDS 21 - 350 235 ## COG4718 Phage-related protein 2 1 Op 2 . + CDS 350 - 896 412 ## COG4672 Phage-related protein Predicted protein(s) >gi|296918698|gb|GG773002.1| GENE 1 21 - 350 235 109 aa, chain + ## HITS:1 COG:ECs1644 KEGG:ns NR:ns ## COG: ECs1644 COG4718 # Protein_GI_number: 15830898 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 192 94.0 1e-49 MKTFRWKVKPGMDVTSAPSVREVRFGDGYSQRAPAGLNADLKTYSVTLSVSREEATALES FLAEHGGWKAFLWTPPYGYRQIKVTCAKWSSRVSMLRVEFSAEFEQVVN >gi|296918698|gb|GG773002.1| GENE 2 350 - 896 412 182 aa, chain + ## HITS:1 COG:ECs1645 KEGG:ns NR:ns ## COG: ECs1645 COG4672 # Protein_GI_number: 15830899 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 1 182 1 182 232 364 98.0 1e-101 MQDIRQETLNECTRAEQSASVVLWEIDLTEVGGERYFFCNEQNEKGEPVTWQGRQYQPYP IQGSSFELNGKGTSTRPTLTVSNLYGMVTGMVEDLQSLVGGTVVRRKVYARFLDAVNFVN GNRDADPEQEVISRWRIEQCSELSAVSASFVLSTPTETDGAVFPGRIMLANTCTWTYRGD EC Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:46:30 2011 Seq name: gi|296918697|gb|GG773003.1| Escherichia coli MS 110-3 genomic scaffold Scfld142, whole genome shotgun sequence Length of sequence - 358707 bp Number of predicted genes - 336, with homology - 336 Number of transcription units - 164, operones - 75 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 37 - 112 88.7 # Thr GGT 0 0 + 5S_RRNA 142 - 196 96.0 # BX571874 [R:290554..290680] # 5S ribosomal RNA # Photorhabdus luminescens subsp. laumondii TTO1 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus. - Term 19 - 86 19.2 1 1 Op 1 34/0.000 - CDS 312 - 1070 533 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 2 1 Op 2 6/0.129 - CDS 1078 - 2181 867 ## COG0765 ABC-type amino acid transport system, permease component 3 1 Op 3 6/0.129 - CDS 2191 - 3372 859 ## COG4597 ABC-type amino acid transport system, permease component - Term 3382 - 3432 6.1 4 1 Op 4 . - CDS 3440 - 4465 898 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 4603 - 4662 4.7 - Term 4856 - 4888 4.1 5 2 Tu 1 . - CDS 4896 - 5117 277 ## ECS88_3652 hypothetical protein - Prom 5294 - 5353 8.4 - Term 5328 - 5355 -0.1 6 3 Op 1 27/0.000 - CDS 5370 - 8474 2848 ## COG0841 Cation/multidrug efflux pump 7 3 Op 2 . - CDS 8486 - 9643 816 ## COG0845 Membrane-fusion protein + Prom 9806 - 9865 5.3 8 4 Tu 1 . + CDS 10042 - 10704 401 ## COG1309 Transcriptional regulator + Term 10738 - 10779 2.3 9 5 Op 1 . - CDS 10707 - 10886 88 ## EcE24377A_3748 hypothetical protein - Prom 10906 - 10965 1.9 10 5 Op 2 1/0.857 - CDS 10970 - 11854 697 ## COG0863 DNA modification methylase - Term 11873 - 11910 1.4 11 6 Op 1 12/0.029 - CDS 11942 - 12238 385 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator 12 6 Op 2 7/0.114 - CDS 12264 - 13229 1101 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase - Prom 13377 - 13436 5.5 - Term 13450 - 13504 3.0 13 7 Op 1 3/0.643 - CDS 13558 - 14439 1543 ## PROTEIN SUPPORTED gi|15833385|ref|NP_312158.1| ribosomal protein L11 methyltransferase 14 7 Op 2 4/0.386 - CDS 14451 - 15902 1566 ## COG4145 Na+/panthothenate symporter 15 7 Op 3 . - CDS 15892 - 16134 330 ## COG3924 Predicted membrane protein - Prom 16166 - 16225 3.6 16 8 Op 1 3/0.643 - CDS 16227 - 17162 415 ## COG0524 Sugar kinases, ribokinase family 17 8 Op 2 . - CDS 17194 - 18009 498 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 18124 - 18183 5.0 18 9 Tu 1 . - CDS 18262 - 18438 74 ## UTI89_C3696 hypothetical protein + Prom 18103 - 18162 6.3 19 10 Op 1 . + CDS 18365 - 19219 718 ## COG0191 Fructose/tagatose bisphosphate aldolase 20 10 Op 2 16/0.000 + CDS 19255 - 20145 903 ## COG1879 ABC-type sugar transport system, periplasmic component 21 10 Op 3 21/0.000 + CDS 20206 - 21705 181 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 22 10 Op 4 2/0.800 + CDS 21706 - 22695 889 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 23 10 Op 5 . + CDS 22717 - 23679 704 ## COG0524 Sugar kinases, ribokinase family 24 10 Op 6 . + CDS 23676 - 24722 794 ## ECS88_3633 hypothetical protein + Term 24739 - 24777 1.3 - Term 24727 - 24765 1.3 25 11 Op 1 27/0.000 - CDS 24814 - 26163 1376 ## COG0439 Biotin carboxylase 26 11 Op 2 . - CDS 26174 - 26644 427 ## COG0511 Biotin carboxyl carrier protein 27 12 Op 1 . - CDS 27421 - 27585 89 ## UTI89_C3685 hypothetical protein 28 12 Op 2 . - CDS 27622 - 28596 1146 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 28634 - 28693 3.4 + Prom 28597 - 28656 3.7 29 13 Tu 1 . + CDS 28748 - 30688 1227 ## COG2200 FOG: EAL domain + Prom 30894 - 30953 4.9 30 14 Op 1 22/0.000 + CDS 30993 - 32036 1117 ## COG1077 Actin-like ATPase involved in cell morphogenesis 31 14 Op 2 19/0.000 + CDS 32102 - 33205 1118 ## COG1792 Cell shape-determining protein 32 14 Op 3 7/0.114 + CDS 33205 - 33693 439 ## COG2891 Cell shape-determining protein 33 14 Op 4 8/0.100 + CDS 33702 - 34295 558 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 34 14 Op 5 5/0.200 + CDS 34285 - 35754 1562 ## COG1530 Ribonucleases G and E 35 14 Op 6 3/0.643 + CDS 35822 - 39622 3155 ## COG3164 Predicted membrane protein 36 15 Op 1 17/0.000 + CDS 39778 - 40392 811 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs + Term 40397 - 40459 3.7 + Prom 40394 - 40453 14.1 37 15 Op 2 . + CDS 40526 - 41275 897 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs 38 16 Tu 1 . - CDS 41403 - 42332 785 ## COG0583 Transcriptional regulator - Prom 42373 - 42432 6.7 + Prom 42349 - 42408 5.9 39 17 Op 1 . + CDS 42515 - 42718 130 ## G2583_3962 hypothetical protein 40 17 Op 2 6/0.129 + CDS 42726 - 43658 973 ## COG1566 Multidrug resistance efflux pump 41 17 Op 3 4/0.386 + CDS 43664 - 45583 1100 ## COG1289 Predicted membrane protein + Prom 45585 - 45644 7.8 42 17 Op 4 . + CDS 45666 - 45938 353 ## COG2732 Barstar, RNAse (barnase) inhibitor - Term 45935 - 45965 4.1 43 18 Tu 1 . - CDS 45993 - 46256 332 ## APECO1_3206 hypothetical protein - Prom 46313 - 46372 7.2 - Term 46576 - 46615 5.4 44 19 Tu 1 . - CDS 46620 - 47090 550 ## COG1438 Arginine repressor - Prom 47116 - 47175 5.2 + Prom 47262 - 47321 5.0 45 20 Tu 1 . + CDS 47525 - 48463 1317 ## COG0039 Malate/lactate dehydrogenases + Term 48474 - 48525 6.0 - Term 48474 - 48503 1.2 46 21 Op 1 6/0.129 - CDS 48526 - 49593 1102 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 49620 - 49679 4.2 47 21 Op 2 5/0.200 - CDS 49683 - 51050 1405 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 51095 - 51154 4.2 - Term 51161 - 51193 3.8 48 22 Tu 1 . - CDS 51204 - 51602 528 ## COG3105 Uncharacterized protein conserved in bacteria - Prom 51716 - 51775 3.3 + Prom 51847 - 51906 2.2 49 23 Tu 1 . + CDS 51952 - 52923 668 ## COG1485 Predicted ATPase + Term 52946 - 52978 3.1 + Prom 52926 - 52985 5.6 50 24 Op 1 59/0.000 + CDS 53068 - 53571 881 ## PROTEIN SUPPORTED gi|226956764|ref|YP_002807559.1| 50S ribosomal subunit protein L13 51 24 Op 2 6/0.129 + CDS 53587 - 53979 650 ## PROTEIN SUPPORTED gi|15803764|ref|NP_289798.1| 30S ribosomal protein S9 + Term 54018 - 54043 -0.5 52 25 Op 1 13/0.014 + CDS 54374 - 55012 663 ## PROTEIN SUPPORTED gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase 53 25 Op 2 1/0.857 + CDS 55018 - 55515 491 ## COG2969 Stringent starvation protein B + Term 55519 - 55560 6.3 + Prom 55550 - 55609 4.2 54 26 Tu 1 . + CDS 55632 - 56414 920 ## COG2186 Transcriptional regulators + Prom 56442 - 56501 3.7 55 27 Tu 1 . + CDS 56536 - 57429 961 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase + Prom 57434 - 57493 2.9 56 28 Op 1 1/0.857 + CDS 57538 - 59028 1824 ## COG0477 Permeases of the major facilitator superfamily + Term 59036 - 59067 2.4 57 28 Op 2 5/0.200 + CDS 59076 - 59765 759 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 58 28 Op 3 3/0.643 + CDS 59762 - 60637 322 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 59 28 Op 4 . + CDS 60634 - 61098 365 ## COG2731 Beta-galactosidase, beta subunit + Term 61123 - 61165 12.1 - Term 61116 - 61148 5.6 60 29 Op 1 21/0.000 - CDS 61166 - 62584 1507 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 61 29 Op 2 . - CDS 62597 - 67057 4603 ## COG0069 Glutamate synthase domain 2 - Prom 67227 - 67286 1.9 62 30 Op 1 4/0.386 + CDS 67756 - 68661 845 ## COG1242 Predicted Fe-S oxidoreductase + Prom 68674 - 68733 3.4 63 30 Op 2 2/0.800 + CDS 68757 - 71093 2647 ## COG0642 Signal transduction histidine kinase + Prom 71210 - 71269 3.7 64 31 Op 1 3/0.643 + CDS 71323 - 71976 773 ## COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 65 31 Op 2 . + CDS 71994 - 72701 527 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 72895 - 72935 3.7 66 32 Tu 1 . - CDS 72698 - 73330 524 ## ECS88_3591 hypothetical protein - Prom 73442 - 73501 3.6 - Term 73427 - 73488 6.1 67 33 Op 1 7/0.114 - CDS 73544 - 73816 298 ## COG1925 Phosphotransferase system, HPr-related proteins 68 33 Op 2 8/0.100 - CDS 73813 - 74667 841 ## COG1660 Predicted P-loop-containing kinase 69 33 Op 3 11/0.043 - CDS 74713 - 75204 367 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Term 75256 - 75293 8.2 70 34 Op 1 11/0.043 - CDS 75322 - 75609 462 ## PROTEIN SUPPORTED gi|227335124|ref|ZP_03838780.1| hypothetical protein CIT292_04930 71 34 Op 2 17/0.000 - CDS 75632 - 77065 1416 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 72 34 Op 3 19/0.000 - CDS 77113 - 77838 287 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 73 34 Op 4 12/0.029 - CDS 77845 - 78402 585 ## COG1934 Uncharacterized protein conserved in bacteria 74 34 Op 5 11/0.043 - CDS 78371 - 78946 412 ## COG3117 Uncharacterized protein conserved in bacteria 75 34 Op 6 13/0.014 - CDS 78943 - 79509 736 ## COG1778 Low specificity phosphatase (HAD superfamily) 76 34 Op 7 6/0.129 - CDS 79530 - 80516 874 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 77 34 Op 8 . - CDS 80530 - 81507 690 ## COG0530 Ca2+/Na+ antiporter - Prom 81570 - 81629 5.5 + Prom 81590 - 81649 4.3 78 35 Op 1 23/0.000 + CDS 81717 - 82526 299 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 79 35 Op 2 16/0.000 + CDS 82534 - 83316 742 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 80 35 Op 3 13/0.014 + CDS 83321 - 83872 646 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 81 35 Op 4 10/0.100 + CDS 83891 - 84526 866 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 82 35 Op 5 6/0.129 + CDS 84526 - 84819 332 ## COG3113 Predicted NTP binding protein (contains STAS domain) + Term 84870 - 84922 6.0 + Prom 84859 - 84918 1.6 83 36 Op 1 11/0.043 + CDS 84964 - 85233 312 ## COG5007 Predicted transcriptional regulator, BolA superfamily 84 36 Op 2 . + CDS 85288 - 86547 1424 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 85 37 Tu 1 . - CDS 86595 - 86873 309 ## COG3423 Predicted transcriptional regulator - Prom 87110 - 87169 4.2 86 38 Tu 1 . - CDS 87171 - 88142 1027 ## COG0142 Geranylgeranyl pyrophosphate synthase - Prom 88216 - 88275 3.2 + Prom 88276 - 88335 3.6 87 39 Op 1 32/0.000 + CDS 88377 - 88712 562 ## PROTEIN SUPPORTED gi|224585100|ref|YP_002638899.1| 50S ribosomal protein L21 88 39 Op 2 6/0.129 + CDS 88733 - 88990 437 ## PROTEIN SUPPORTED gi|15803725|ref|NP_289759.1| 50S ribosomal protein L27 + Term 89019 - 89052 4.5 + Prom 89015 - 89074 3.6 89 40 Op 1 6/0.129 + CDS 89117 - 90082 751 ## PROTEIN SUPPORTED gi|145636992|ref|ZP_01792656.1| 50S ribosomal protein L27 90 40 Op 2 . + CDS 90098 - 91270 1461 ## COG0536 Predicted GTPase + Term 91288 - 91312 -0.3 91 41 Tu 1 . - CDS 91377 - 92696 981 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) - Prom 92913 - 92972 3.2 + Prom 92852 - 92911 5.7 92 42 Tu 1 . + CDS 93058 - 93534 566 ## COG0782 Transcription elongation factor + Term 93583 - 93609 1.7 - Term 93565 - 93604 7.4 93 43 Tu 1 . - CDS 93690 - 93983 454 ## PROTEIN SUPPORTED gi|188532496|ref|YP_001906293.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein - Prom 94151 - 94210 3.0 + Prom 93972 - 94031 4.2 94 44 Op 1 13/0.014 + CDS 94109 - 94738 595 ## COG0293 23S rRNA methylase + Prom 94740 - 94799 4.2 95 44 Op 2 7/0.114 + CDS 94829 - 96772 1683 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 96841 - 96884 6.1 + Prom 96798 - 96857 29.7 96 45 Op 1 9/0.100 + CDS 96902 - 97750 864 ## COG0294 Dihydropteroate synthase and related enzymes 97 45 Op 2 7/0.114 + CDS 97743 - 99080 1544 ## COG1109 Phosphomannomutase + Term 99104 - 99131 -0.1 + Prom 99121 - 99180 5.1 98 46 Tu 1 . + CDS 99308 - 99640 402 ## COG1314 Preprotein translocase subunit SecG + Term 99749 - 99784 4.4 + TRNA 99655 - 99741 70.3 # Leu GAG 0 0 + Prom 100094 - 100153 7.1 99 47 Tu 1 . + CDS 100195 - 101820 535 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Term 101779 - 101820 5.7 100 48 Tu 1 . - CDS 101828 - 103171 1600 ## COG0137 Argininosuccinate synthase - Prom 103231 - 103290 3.8 + TRNA 103519 - 103595 86.1 # Met CAT 0 0 101 49 Op 1 32/0.000 + CDS 103832 - 104254 397 ## COG0779 Uncharacterized protein conserved in bacteria 102 49 Op 2 20/0.000 + CDS 104282 - 105769 1026 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 103 49 Op 3 32/0.000 + CDS 105794 - 108466 3211 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) + Term 108494 - 108552 2.1 + Prom 108534 - 108593 2.3 104 49 Op 4 26/0.000 + CDS 108630 - 109031 653 ## COG0858 Ribosome-binding factor A 105 49 Op 5 14/0.014 + CDS 109031 - 109975 1027 ## COG0130 Pseudouridine synthase + Term 110068 - 110106 -0.8 + Prom 109988 - 110047 4.1 106 50 Op 1 26/0.000 + CDS 110124 - 110393 445 ## PROTEIN SUPPORTED gi|16131057|ref|NP_417634.1| 30S ribosomal subunit protein S15 + Term 110415 - 110443 1.3 107 50 Op 2 6/0.129 + CDS 110640 - 112775 183 ## PROTEIN SUPPORTED gi|229537485|ref|ZP_04426621.1| ribosomal protein S1 + Term 112787 - 112820 5.9 108 51 Tu 1 . + CDS 112884 - 113768 622 ## COG4785 Lipoprotein NlpI, contains TPR repeats + Term 113804 - 113840 1.3 + Prom 113863 - 113922 5.7 109 52 Tu 1 . + CDS 113948 - 115837 2486 ## COG0513 Superfamily II DNA and RNA helicases + Term 115881 - 115915 3.5 + Prom 115845 - 115904 5.6 110 53 Tu 1 . + CDS 115996 - 117240 1508 ## COG0814 Amino acid permeases - Term 117269 - 117305 2.0 111 54 Op 1 2/0.800 - CDS 117358 - 118365 1042 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 112 54 Op 2 13/0.014 - CDS 118446 - 119324 965 ## COG0826 Collagenase and related proteases 113 54 Op 3 . - CDS 119333 - 120328 751 ## COG0826 Collagenase and related proteases - Prom 120358 - 120417 4.4 + Prom 120437 - 120496 4.4 114 55 Op 1 6/0.129 + CDS 120537 - 121061 701 ## COG3154 Putative lipid carrier protein 115 55 Op 2 . + CDS 121055 - 121558 741 ## COG3153 Predicted acetyltransferase + Term 121610 - 121652 1.1 116 56 Tu 1 . - CDS 121545 - 121847 238 ## COG2827 Predicted endonuclease containing a URI domain - Prom 121872 - 121931 4.2 + Prom 121817 - 121876 3.1 117 57 Tu 1 . + CDS 121898 - 122341 411 ## COG3787 Uncharacterized protein conserved in bacteria + Term 122379 - 122407 1.4 - Term 122167 - 122205 -0.1 118 58 Tu 1 . - CDS 122321 - 122839 513 ## COG0693 Putative intracellular protease/amidase + Prom 122832 - 122891 2.3 119 59 Op 1 2/0.800 + CDS 122967 - 123602 605 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Term 123616 - 123668 3.2 120 59 Op 2 . + CDS 123675 - 124715 1206 ## COG0701 Predicted permeases + Term 124877 - 124911 2.0 - Term 124719 - 124760 2.6 121 60 Op 1 11/0.043 - CDS 124828 - 125403 631 ## COG2823 Predicted periplasmic or secreted lipoprotein 122 60 Op 2 11/0.043 - CDS 125413 - 126003 475 ## COG0279 Phosphoheptose isomerase 123 60 Op 3 10/0.100 - CDS 126023 - 126418 139 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 124 60 Op 4 . - CDS 126376 - 128412 1835 ## COG3107 Putative lipoprotein - Prom 128600 - 128659 2.7 + Prom 128380 - 128439 6.5 125 61 Tu 1 . + CDS 128477 - 129340 975 ## COG0313 Predicted methyltransferases - Term 129234 - 129264 0.6 126 62 Tu 1 2/0.800 - CDS 129390 - 130103 583 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Term 130116 - 130146 1.0 127 63 Op 1 13/0.014 - CDS 130184 - 130975 899 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 128 63 Op 2 13/0.014 - CDS 130965 - 131768 812 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 129 63 Op 3 3/0.643 - CDS 131807 - 132283 580 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 132319 - 132378 5.8 - Term 132381 - 132421 7.7 130 64 Op 1 3/0.643 - CDS 132450 - 133310 910 ## COG0191 Fructose/tagatose bisphosphate aldolase 131 64 Op 2 9/0.100 - CDS 133323 - 134477 949 ## COG2222 Predicted phosphosugar isomerases - Prom 134565 - 134624 6.1 - Term 134772 - 134807 -0.0 132 65 Op 1 3/0.643 - CDS 134826 - 135959 942 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 133 65 Op 2 4/0.386 - CDS 135956 - 136390 579 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 134 65 Op 3 13/0.014 - CDS 136408 - 137286 1160 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 135 65 Op 4 13/0.014 - CDS 137276 - 138055 1013 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 136 65 Op 5 1/0.857 - CDS 138066 - 138539 580 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 137 65 Op 6 . - CDS 138562 - 139842 1383 ## COG4573 Predicted tagatose 6-phosphate kinase - Prom 139926 - 139985 6.0 + Prom 139871 - 139930 6.0 138 66 Tu 1 . + CDS 140091 - 140915 640 ## COG1349 Transcriptional regulators of sugar metabolism + Term 141150 - 141190 2.1 - Term 140911 - 140949 5.8 139 67 Tu 1 . - CDS 140967 - 142538 1216 ## COG2721 Altronate dehydratase - Prom 142739 - 142798 6.9 + Prom 142762 - 142821 6.9 140 68 Op 1 6/0.129 + CDS 142913 - 144253 1614 ## COG0477 Permeases of the major facilitator superfamily 141 68 Op 2 1/0.857 + CDS 144269 - 145039 812 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 142 68 Op 3 1/0.857 + CDS 145069 - 145959 1182 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 143 68 Op 4 1/0.857 + CDS 146056 - 147201 1121 ## COG1929 Glycerate kinase + Prom 148517 - 148576 7.2 144 69 Op 1 4/0.386 + CDS 148709 - 149647 713 ## COG0583 Transcriptional regulator + Prom 149656 - 149715 4.2 145 69 Op 2 4/0.386 + CDS 149740 - 150729 974 ## COG1171 Threonine dehydratase 146 69 Op 3 3/0.643 + CDS 150751 - 152082 1496 ## COG0814 Amino acid permeases 147 69 Op 4 3/0.643 + CDS 152108 - 153316 951 ## COG0282 Acetate kinase 148 69 Op 5 1/0.857 + CDS 153350 - 155644 2454 ## COG1882 Pyruvate-formate lyase 149 69 Op 6 1/0.857 + CDS 155658 - 156047 398 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 156056 - 156098 9.5 150 69 Op 7 10/0.100 + CDS 156119 - 157471 1126 ## COG1760 L-serine deaminase + Term 157479 - 157548 27.7 + Prom 157473 - 157532 61.2 151 70 Op 1 3/0.643 + CDS 157771 - 159102 1409 ## COG0814 Amino acid permeases 152 70 Op 2 . + CDS 159130 - 160440 1174 ## COG3681 Uncharacterized conserved protein + Term 160458 - 160493 2.3 153 71 Op 1 . - CDS 160572 - 160736 200 ## G2583_3831 hypothetical protein 154 71 Op 2 . - CDS 160759 - 161460 605 ## COG1741 Pirin-related protein - Prom 161518 - 161577 1.7 155 72 Tu 1 . + CDS 161565 - 162461 947 ## COG0583 Transcriptional regulator + Term 162464 - 162505 8.3 - Term 162450 - 162494 5.1 156 73 Tu 1 . - CDS 162495 - 162863 352 ## COG3152 Predicted membrane protein - Prom 162904 - 162963 5.7 - Term 162983 - 163019 2.4 157 74 Op 1 3/0.643 - CDS 163146 - 164132 1106 ## COG0435 Predicted glutathione S-transferase - Term 164145 - 164174 1.2 158 74 Op 2 . - CDS 164202 - 164684 568 ## COG2259 Predicted membrane protein - Prom 164705 - 164764 2.0 - Term 164740 - 164770 3.4 159 75 Op 1 . - CDS 164781 - 165080 379 ## ECIAI39_3601 hypothetical protein 160 75 Op 2 7/0.114 - CDS 165070 - 165474 350 ## COG5393 Predicted membrane protein 161 75 Op 3 . - CDS 165477 - 165782 445 ## COG4575 Uncharacterized conserved protein 162 75 Op 4 . - CDS 165820 - 166203 456 ## SSON_3256 hypothetical protein - Prom 166269 - 166328 3.5 - Term 166233 - 166271 6.4 163 76 Op 1 . - CDS 166335 - 166703 247 ## E2348C_3389 hypothetical protein 164 76 Op 2 . - CDS 166722 - 167384 655 ## COG0586 Uncharacterized membrane-associated protein - Prom 167553 - 167612 5.6 - Term 167682 - 167717 5.2 165 77 Tu 1 . - CDS 167729 - 168520 910 ## COG2186 Transcriptional regulators - Prom 168551 - 168610 20.9 - Term 168575 - 168612 8.0 166 78 Tu 1 . - CDS 168654 - 169952 1732 ## COG0477 Permeases of the major facilitator superfamily - Prom 170190 - 170249 3.0 + Prom 170269 - 170328 3.3 167 79 Op 1 3/0.643 + CDS 170435 - 171847 1720 ## COG1904 Glucuronate isomerase 168 79 Op 2 . + CDS 171862 - 173349 1515 ## COG2721 Altronate dehydratase + Term 173376 - 173412 6.4 169 80 Tu 1 . + CDS 173432 - 173983 355 ## ECS88_3486 hypothetical protein - Term 173943 - 173979 7.1 170 81 Tu 1 . - CDS 173987 - 175231 1438 ## COG3633 Na+/serine symporter - Prom 175355 - 175414 5.9 - Term 175408 - 175439 -0.8 171 82 Tu 1 . - CDS 175555 - 176520 1319 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance - Prom 176729 - 176788 6.7 - Term 176725 - 176777 6.6 172 83 Op 1 3/0.643 - CDS 176803 - 177807 732 ## COG0673 Predicted dehydrogenases and related proteins 173 83 Op 2 3/0.643 - CDS 177868 - 178560 500 ## COG2949 Uncharacterized membrane protein 174 83 Op 3 . - CDS 178637 - 179140 492 ## COG1451 Predicted metal-dependent hydrolase - Prom 179196 - 179255 2.0 + Prom 179121 - 179180 4.6 175 84 Tu 1 . + CDS 179225 - 180361 449 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative 176 85 Tu 1 . - CDS 180479 - 182497 1766 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family - Prom 182538 - 182597 7.2 - Term 182600 - 182635 -0.9 177 86 Op 1 . - CDS 182668 - 185019 2658 ## ECS88_3477 glycosyl hydrolase 178 86 Op 2 . - CDS 185036 - 186106 1022 ## ECS88_3476 hypothetical protein - Prom 186144 - 186203 6.7 - Term 186160 - 186220 13.3 179 87 Op 1 3/0.643 - CDS 186240 - 187673 1406 ## COG0531 Amino acid transporters - Prom 187699 - 187758 18.1 - Term 187705 - 187734 1.4 180 87 Op 2 . - CDS 187762 - 188211 405 ## COG2731 Beta-galactosidase, beta subunit 181 87 Op 3 1/0.857 - CDS 188208 - 191300 3065 ## COG3250 Beta-galactosidase/beta-glucuronidase - Prom 191371 - 191430 3.5 - Term 191425 - 191475 13.2 182 88 Tu 1 . - CDS 191484 - 192467 938 ## COG1609 Transcriptional regulators - Prom 192656 - 192715 5.2 + Prom 192418 - 192477 2.6 183 89 Tu 1 . + CDS 192686 - 193018 474 ## COG0073 EMAP domain + Term 193024 - 193064 8.1 - Term 193011 - 193052 9.1 184 90 Tu 1 . - CDS 193060 - 194349 1366 ## COG4992 Ornithine/acetylornithine aminotransferase 185 91 Tu 1 . + CDS 194857 - 196377 1430 ## COG0840 Methyl-accepting chemotaxis protein - Term 196399 - 196442 3.2 186 92 Tu 1 . - CDS 196531 - 197154 785 ## COG1695 Predicted transcriptional regulators - Prom 197180 - 197239 8.6 + Prom 197171 - 197230 6.4 187 93 Tu 1 . + CDS 197431 - 198195 804 ## COG2375 Siderophore-interacting protein - TRNA 198291 - 198366 93.9 # Met CAT 0 0 + Prom 198410 - 198469 6.7 188 94 Tu 1 . + CDS 198491 - 198997 404 ## COG3663 G:T/U mismatch-specific DNA glycosylase + Term 199002 - 199032 2.6 - Term 198988 - 199020 3.0 189 95 Op 1 31/0.000 - CDS 199076 - 200917 2278 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 190 95 Op 2 8/0.100 - CDS 201112 - 202857 1384 ## COG0358 DNA primase (bacterial type) - Prom 202880 - 202939 3.0 - Term 202881 - 202921 6.1 191 96 Tu 1 . - CDS 202968 - 203183 357 ## PROTEIN SUPPORTED gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 - Prom 203319 - 203378 6.3 + Prom 203338 - 203397 4.0 192 97 Tu 1 . + CDS 203421 - 204434 666 ## PROTEIN SUPPORTED gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase 193 98 Op 1 3/0.643 - CDS 204477 - 205940 1476 ## COG0471 Di- and tricarboxylate transporters - Term 205947 - 205980 2.1 194 98 Op 2 11/0.043 - CDS 205988 - 206617 252 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 195 98 Op 3 . - CDS 206590 - 207498 265 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase - Prom 207582 - 207641 3.0 + Prom 207523 - 207582 3.9 196 99 Tu 1 . + CDS 207708 - 208640 829 ## COG0583 Transcriptional regulator 197 100 Tu 1 . - CDS 208653 - 209270 531 ## COG0344 Predicted membrane protein - Prom 209374 - 209433 1.8 198 101 Tu 1 4/0.386 + CDS 209375 - 209743 397 ## COG1539 Dihydroneopterin aldolase 199 102 Tu 1 . + CDS 209834 - 210655 984 ## COG1968 Uncharacterized bacitracin resistance protein + Term 210667 - 210700 -0.4 - Term 210732 - 210776 4.1 200 103 Op 1 7/0.114 - CDS 210843 - 212081 1094 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 201 103 Op 2 . - CDS 212145 - 212765 723 ## COG3103 SH3 domain protein - Prom 212792 - 212851 2.2 202 104 Op 1 . + CDS 212784 - 212990 73 ## ECUMN_3537 hypothetical protein 203 104 Op 2 5/0.200 + CDS 213007 - 214308 1496 ## COG3025 Uncharacterized conserved protein 204 104 Op 3 5/0.200 + CDS 214331 - 217171 2922 ## COG1391 Glutamine synthetase adenylyltransferase 205 104 Op 4 . + CDS 217219 - 218652 1783 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase + Term 218851 - 218882 3.2 - Term 219011 - 219059 6.1 206 105 Op 1 . - CDS 219071 - 220732 1798 ## COG2268 Uncharacterized protein conserved in bacteria 207 105 Op 2 . - CDS 220759 - 221388 143 ## ECS88_3447 hypothetical protein - Prom 221514 - 221573 6.2 + Prom 221505 - 221564 8.1 208 106 Tu 1 . + CDS 221658 - 221858 173 ## ECUMN_3531 glycogen synthesis protein GlgS + Term 221864 - 221891 1.5 209 107 Tu 1 . - CDS 221893 - 222192 362 ## COG2960 Uncharacterized protein conserved in bacteria - Prom 222220 - 222279 3.7 210 108 Tu 1 . + CDS 222566 - 223219 827 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase + Term 223240 - 223281 7.8 - Term 223228 - 223269 7.0 211 109 Tu 1 . - CDS 223273 - 224040 312 ## ECS88_3443 fimbrial adhesin 212 110 Op 1 10/0.100 - CDS 224319 - 225059 576 ## COG3121 P pilus assembly protein, chaperone PapD 213 110 Op 2 6/0.129 - CDS 225075 - 227369 1533 ## COG3188 P pilus assembly protein, porin PapC - Prom 227600 - 227659 3.3 - Term 227607 - 227651 1.2 214 111 Tu 1 . - CDS 227684 - 228247 605 ## COG3539 P pilus assembly protein, pilin FimA - Prom 228344 - 228403 8.2 + Prom 228568 - 228627 6.4 215 112 Tu 1 . + CDS 228818 - 228988 212 ## ECS88_3438 hypothetical protein + Term 229006 - 229051 8.0 - Term 228990 - 229040 6.1 216 113 Tu 1 . - CDS 229050 - 229823 895 ## COG0428 Predicted divalent heavy-metal cations transporter - Prom 229920 - 229979 3.5 + Prom 229816 - 229875 5.5 217 114 Tu 1 . + CDS 229966 - 230754 888 ## COG3384 Uncharacterized conserved protein - Term 230750 - 230814 24.1 218 115 Op 1 3/0.643 - CDS 230833 - 231504 456 ## COG1495 Disulfide bond formation protein DsbB 219 115 Op 2 . - CDS 231519 - 232187 825 ## COG0526 Thiol-disulfide isomerase and thioredoxins 220 115 Op 3 . - CDS 232205 - 234001 1861 ## ECS88_3432 arylsulfate sulfotransferase (EC:2.8.2.22) - Prom 234249 - 234308 4.8 - Term 234440 - 234473 4.1 221 116 Op 1 5/0.200 - CDS 234486 - 235646 1168 ## COG0754 Glutathionylspermidine synthase 222 116 Op 2 . - CDS 235652 - 236323 467 ## COG5463 Predicted integral membrane protein - Prom 236351 - 236410 2.5 223 117 Tu 1 . - CDS 236471 - 237952 1617 ## COG1538 Outer membrane protein - Prom 238067 - 238126 6.6 + Prom 237948 - 238007 4.7 224 118 Op 1 8/0.100 + CDS 238157 - 238786 597 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 225 118 Op 2 7/0.114 + CDS 238787 - 239209 181 ## COG3151 Uncharacterized protein conserved in bacteria 226 118 Op 3 7/0.114 + CDS 239234 - 240061 741 ## COG1409 Predicted phosphohydrolases 227 118 Op 4 7/0.114 + CDS 240061 - 240642 469 ## COG3150 Predicted esterase 228 118 Op 5 . + CDS 240671 - 242563 1970 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 242593 - 242632 9.1 - Term 242579 - 242618 9.1 229 119 Tu 1 . - CDS 242627 - 244768 1080 ## PROTEIN SUPPORTED gi|145633184|ref|ZP_01788915.1| putative hydroxamate-type ferrisiderophore receptor - Prom 244954 - 245013 10.5 + Prom 244940 - 244999 9.5 230 120 Op 1 35/0.000 + CDS 245142 - 245951 475 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 231 120 Op 2 20/0.000 + CDS 245948 - 246931 536 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 232 120 Op 3 33/0.000 + CDS 246940 - 247977 494 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 233 120 Op 4 2/0.800 + CDS 247988 - 248935 598 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 234 120 Op 5 . + CDS 248932 - 249819 499 ## COG1737 Transcriptional regulators + Term 249821 - 249860 -0.6 235 121 Op 1 4/0.386 - CDS 249864 - 250178 413 ## COG1359 Uncharacterized conserved protein 236 121 Op 2 . - CDS 250209 - 250790 664 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 251026 - 251085 6.2 + Prom 250939 - 250998 6.4 237 122 Op 1 . + CDS 251040 - 251519 17 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 238 122 Op 2 . + CDS 251522 - 252232 260 ## APECO1_3393 hypothetical protein + Term 252389 - 252438 -0.6 - Term 252564 - 252609 9.2 239 123 Op 1 40/0.000 - CDS 252617 - 253966 1159 ## COG0642 Signal transduction histidine kinase 240 123 Op 2 . - CDS 253963 - 254622 790 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 254686 - 254745 5.0 + Prom 254643 - 254702 9.5 241 124 Op 1 3/0.643 + CDS 254774 - 255166 502 ## COG3111 Uncharacterized conserved protein 242 124 Op 2 2/0.800 + CDS 255219 - 255701 349 ## COG3449 DNA gyrase inhibitor + Term 255742 - 255800 7.0 + Prom 255723 - 255782 2.8 243 125 Tu 1 . + CDS 255810 - 257381 1462 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Prom 257383 - 257442 45.1 244 126 Op 1 . + CDS 257536 - 259794 2559 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 259940 - 259968 -0.9 + Prom 259890 - 259949 2.3 245 126 Op 2 7/0.114 + CDS 260029 - 260766 558 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 260785 - 260819 2.8 246 126 Op 3 . + CDS 260841 - 262253 1184 ## COG2132 Putative multicopper oxidases + Term 262262 - 262307 11.3 247 127 Op 1 11/0.043 - CDS 262324 - 263628 1207 ## PROTEIN SUPPORTED gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 248 127 Op 2 11/0.043 - CDS 263639 - 264121 240 ## PROTEIN SUPPORTED gi|90020580|ref|YP_526407.1| ribosomal protein S3 - Term 264125 - 264155 1.0 249 127 Op 3 . - CDS 264163 - 265146 726 ## PROTEIN SUPPORTED gi|239995924|ref|ZP_04716448.1| ribosomal protein L22 250 127 Op 4 2/0.800 - CDS 265219 - 266229 919 ## COG2055 Malate/L-lactate dehydrogenases 251 127 Op 5 2/0.800 - CDS 266240 - 267256 509 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 252 127 Op 6 3/0.643 - CDS 267253 - 268725 993 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 268842 - 268901 4.8 - Term 268990 - 269035 7.7 253 128 Tu 1 . - CDS 269048 - 269797 697 ## COG2186 Transcriptional regulators - Prom 270012 - 270071 2.5 + Prom 269956 - 270015 7.1 254 129 Tu 1 . + CDS 270049 - 272268 2185 ## COG1032 Fe-S oxidoreductase + Term 272275 - 272313 4.6 - Term 272263 - 272301 4.6 255 130 Op 1 . - CDS 272310 - 272567 331 ## COG4238 Murein lipoprotein 256 130 Op 2 . - CDS 272618 - 273544 757 ## ECS88_3393 hypothetical protein - Prom 273648 - 273707 2.6 - Term 273692 - 273730 7.2 257 131 Op 1 . - CDS 273744 - 274571 872 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Term 274580 - 274615 2.0 258 131 Op 2 . - CDS 274676 - 275839 1492 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Prom 276002 - 276061 5.3 259 132 Tu 1 . + CDS 276033 - 276932 831 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 276924 - 276961 7.0 260 133 Tu 1 . - CDS 276972 - 277631 598 ## COG0586 Uncharacterized membrane-associated protein - Prom 277665 - 277724 3.6 261 134 Tu 1 . - CDS 277771 - 278958 1027 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 279110 - 279169 5.0 + Prom 278945 - 279004 2.7 262 135 Op 1 30/0.000 + CDS 279225 - 279944 779 ## COG0811 Biopolymer transport proteins 263 135 Op 2 . + CDS 279951 - 280376 580 ## COG0848 Biopolymer transport protein + Term 280381 - 280423 8.5 - Term 280370 - 280409 7.8 264 136 Tu 1 . - CDS 280415 - 281299 890 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 281459 - 281518 4.1 + Prom 281406 - 281465 3.2 265 137 Tu 1 . + CDS 281490 - 281984 638 ## COG2862 Predicted membrane protein + Term 281992 - 282024 6.1 266 138 Tu 1 . - CDS 282024 - 283064 989 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 283205 - 283264 3.3 267 139 Tu 1 . + CDS 283221 - 284108 783 ## COG0412 Dienelactone hydrolase and related enzymes + Prom 284135 - 284194 3.5 268 140 Tu 1 . + CDS 284227 - 284514 324 ## ECIAI1_3148 hypothetical protein + Prom 284542 - 284601 3.5 269 141 Op 1 4/0.386 + CDS 284703 - 285821 1172 ## COG1740 Ni,Fe-hydrogenase I small subunit 270 141 Op 2 6/0.129 + CDS 285824 - 286810 984 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 271 141 Op 3 4/0.386 + CDS 286800 - 287978 1598 ## COG5557 Polysulphide reductase 272 141 Op 4 5/0.200 + CDS 287975 - 289678 2032 ## COG0374 Ni,Fe-hydrogenase I large subunit 273 141 Op 5 . + CDS 289678 - 290172 614 ## COG0680 Ni,Fe-hydrogenase maturation factor 274 141 Op 6 . + CDS 290165 - 290653 471 ## ECS88_3374 hydrogenase 2-specific chaperone 275 141 Op 7 4/0.386 + CDS 290646 - 290987 305 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 276 141 Op 8 . + CDS 291000 - 291248 360 ## COG0298 Hydrogenase maturation factor + Term 291265 - 291308 3.9 - Term 291187 - 291225 2.1 277 142 Tu 1 . - CDS 291381 - 292247 936 ## COG0625 Glutathione S-transferase - Prom 292309 - 292368 2.7 + Prom 292198 - 292257 3.1 278 143 Tu 1 . + CDS 292452 - 294311 2038 ## COG0754 Glutathionylspermidine synthase + Prom 294464 - 294523 3.9 279 144 Tu 1 . + CDS 294603 - 296102 1387 ## COG0306 Phosphate/sulphate permeases + Term 296109 - 296155 8.1 280 145 Tu 1 . - CDS 296151 - 296843 573 ## ECS88_3368 hypothetical protein - Prom 297065 - 297124 3.3 + Prom 296916 - 296975 5.0 281 146 Op 1 . + CDS 297033 - 297731 337 ## ECS88_3367 hypothetical protein 282 146 Op 2 . + CDS 297763 - 298521 532 ## ECS88_3366 hypothetical protein + Prom 298531 - 298590 2.0 283 147 Op 1 . + CDS 298717 - 299916 865 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 284 147 Op 2 . + CDS 299916 - 300752 634 ## ECS88_3364 hypothetical protein 285 147 Op 3 . + CDS 300752 - 301312 433 ## COG3054 Predicted transcriptional regulator 286 147 Op 4 22/0.000 + CDS 301343 - 302413 932 ## COG0795 Predicted permeases 287 147 Op 5 . + CDS 302410 - 303489 852 ## COG0795 Predicted permeases + Term 303602 - 303634 1.1 - Term 303480 - 303544 11.5 288 148 Op 1 . - CDS 303560 - 304732 1138 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 289 148 Op 2 . - CDS 304732 - 304980 263 ## ECS88_3359 hypothetical protein 290 148 Op 3 2/0.800 - CDS 305012 - 305926 769 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 291 148 Op 4 . - CDS 305923 - 307614 1161 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 307764 - 307823 7.6 + Prom 307760 - 307819 6.6 292 149 Tu 1 . + CDS 308018 - 309160 957 ## ECS88_3356 DNA-binding transcriptional regulator 293 150 Tu 1 . - CDS 309167 - 309931 531 ## COG2186 Transcriptional regulators - Prom 310010 - 310069 7.8 + Prom 309974 - 310033 2.3 294 151 Op 1 9/0.100 + CDS 310182 - 311681 1523 ## COG0277 FAD/FMN-containing dehydrogenases 295 151 Op 2 15/0.000 + CDS 311681 - 312733 940 ## COG0277 FAD/FMN-containing dehydrogenases 296 151 Op 3 1/0.857 + CDS 312744 - 313967 1061 ## COG0247 Fe-S oxidoreductase 297 151 Op 4 1/0.857 + CDS 313972 - 314376 607 ## COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 298 151 Op 5 1/0.857 + CDS 314398 - 316569 2253 ## COG2225 Malate synthase + Term 316598 - 316643 -0.9 + Prom 316782 - 316841 4.5 299 152 Tu 1 . + CDS 316925 - 318607 1772 ## COG1620 L-lactate permease + Term 318617 - 318655 7.1 300 153 Tu 1 . + CDS 319091 - 323653 3815 ## ECS88_3348 inner membrane lipoprotein + Prom 323655 - 323714 3.1 301 154 Op 1 . + CDS 323817 - 324626 482 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 302 154 Op 2 . + CDS 324692 - 325102 234 ## JW2938 hypothetical protein 303 154 Op 3 . + CDS 325120 - 326079 761 ## COG3031 Type II secretory pathway, component PulC 304 154 Op 4 6/0.129 + CDS 326109 - 328169 2107 ## COG1450 Type II secretory pathway, component PulD 305 154 Op 5 24/0.000 + CDS 328169 - 329662 1482 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 306 154 Op 6 10/0.100 + CDS 329662 - 330885 1161 ## COG1459 Type II secretory pathway, component PulF 307 154 Op 7 . + CDS 330902 - 331357 631 ## COG2165 Type II secretory pathway, pseudopilin PulG 308 154 Op 8 . + CDS 331394 - 331924 400 ## ECS88_3340 hypothetical protein 309 154 Op 9 12/0.029 + CDS 331921 - 332292 328 ## COG2165 Type II secretory pathway, pseudopilin PulG 310 154 Op 10 7/0.114 + CDS 332289 - 332894 332 ## COG4795 Type II secretory pathway, component PulJ 311 154 Op 11 4/0.386 + CDS 332891 - 333868 998 ## COG3156 Type II secretory pathway, component PulK 312 154 Op 12 2/0.800 + CDS 333874 - 335043 745 ## COG3297 Type II secretory pathway, component PulL 313 154 Op 13 . + CDS 335045 - 335581 419 ## COG3149 Type II secretory pathway, component PulM + Term 335615 - 335676 7.1 + Prom 336491 - 336550 4.6 314 155 Op 1 26/0.000 + CDS 336639 - 337415 555 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 315 155 Op 2 . + CDS 337412 - 338071 100 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 316 155 Op 3 1/0.857 + CDS 338121 - 338744 74 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 317 155 Op 4 . + CDS 338741 - 339781 240 ## COG2089 Sialic acid synthase + Prom 340327 - 340386 5.3 318 156 Tu 1 . + CDS 340414 - 341037 38 ## COG2755 Lysophospholipase L1 and related esterases + Prom 341280 - 341339 7.0 319 157 Tu 1 . + CDS 341466 - 342209 234 ## COG0381 UDP-N-acetylglucosamine 2-epimerase + Prom 342706 - 342765 6.1 320 158 Tu 1 . + CDS 342799 - 343350 -7 ## APECO1_3475 polysialic acid biosynthesis protein NeuE + Term 343563 - 343611 -0.8 321 159 Tu 1 . + CDS 343754 - 344569 -164 ## ECIAI39_3439 poly-alpha-2,8 sialosyl sialyltransferase 322 160 Op 1 5/0.200 - CDS 344719 - 345924 419 ## COG3562 Capsule polysaccharide export protein 323 160 Op 2 . - CDS 345959 - 347986 1126 ## COG3563 Capsule polysaccharide export protein 324 160 Op 3 . - CDS 347983 - 348723 767 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 325 160 Op 4 4/0.386 - CDS 348733 - 350409 1529 ## COG1596 Periplasmic protein involved in polysaccharide export 326 160 Op 5 . - CDS 350433 - 351581 1151 ## COG3524 Capsule polysaccharide export protein 327 160 Op 6 . - CDS 351653 - 352636 831 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation - Prom 352695 - 352754 5.8 328 161 Tu 1 . - CDS 353446 - 353601 74 ## ECED1_3592 hypothetical protein - Prom 353766 - 353825 53.0 329 162 Tu 1 . - CDS 354018 - 355514 736 ## COG2200 FOG: EAL domain 330 163 Tu 1 . - CDS 355624 - 356469 321 ## ECS88_3318 hypothetical protein - Prom 356509 - 356568 2.8 - Term 356490 - 356524 3.3 331 164 Op 1 . - CDS 356592 - 356789 145 ## ECS88_3317 hypothetical protein 332 164 Op 2 . - CDS 356801 - 357235 137 ## ECS88_3316 hypothetical protein 333 164 Op 3 . - CDS 357317 - 357694 251 ## ECS88_3315 toxin of the YeeV-YeeU toxin-antitoxin system 334 164 Op 4 . - CDS 357741 - 358178 225 ## APECO1_3487 hypothetical protein 335 164 Op 5 . - CDS 358197 - 358418 324 ## ECS88_3313 hypothetical protein 336 164 Op 6 . - CDS 358487 - 358693 62 ## COG2003 DNA repair proteins Predicted protein(s) >gi|296918697|gb|GG773003.1| GENE 1 312 - 1070 533 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 12 250 1 242 245 209 45 9e-53 MSQILLQPANAMITLENVNKWYGQFHVLKNINLIVQPGERIVLCGPSGSGKSTTIRCINH LEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPHLTVLQNCTLAPIWVRKMP KKEAEALAMHYLERVRIAEHAQKFPGQISGGQQQRVAIARSLCMKPKIMLFDEPTSALDP EMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVIFMDRGEIVEQAAPNEFFAHPKS ERTRTFLSQVIH >gi|296918697|gb|GG773003.1| GENE 2 1078 - 2181 867 367 aa, chain - ## HITS:1 COG:yhdY KEGG:ns NR:ns ## COG: yhdY COG0765 # Protein_GI_number: 16131158 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 367 2 368 368 665 97.0 0 MTKVLLSHPPRLASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWVFLQA NWVGSTRADCTKSGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILP HRSRYIAVWAVIYPLVVWWLMYGGFLGLDRVETRQWGGLTLTLIIASVGIAGALPWGILL ALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVIL FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF KDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRF NTGRTPH >gi|296918697|gb|GG773003.1| GENE 3 2191 - 3372 859 393 aa, chain - ## HITS:1 COG:ECs4142 KEGG:ns NR:ns ## COG: ECs4142 COG4597 # Protein_GI_number: 15833396 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 393 7 399 399 686 97.0 0 MSHRRSTVKGSLSFANPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLD RGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLL RKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGD GFLAFILAVVIAIVLSVGLFRFNKTHQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALH WDVPALRGFNFRGGMVLIPELAALTLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGL PNPVTLRRVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAI ETIAMTMSVYLIISLTISLLMNIYNRRIAIVER >gi|296918697|gb|GG773003.1| GENE 4 3440 - 4465 898 341 aa, chain - ## HITS:1 COG:ECs4141 KEGG:ns NR:ns ## COG: ECs4141 COG0834 # Protein_GI_number: 15833395 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 37 341 1 305 305 619 99.0 1e-177 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAFNIIK QVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR >gi|296918697|gb|GG773003.1| GENE 5 4896 - 5117 277 73 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3652 NR:ns ## KEGG: ECS88_3652 # Name: yhdV # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 73 1 73 73 114 100.0 1e-24 MKRLIPVTLLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAA VAGLTMGIIALSK >gi|296918697|gb|GG773003.1| GENE 6 5370 - 8474 2848 1034 aa, chain - ## HITS:1 COG:acrF KEGG:ns NR:ns ## COG: acrF COG0841 # Protein_GI_number: 16131154 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1034 1 1034 1034 1943 99.0 0 MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDT VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQ EVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVASNVKDTLSRLNGVGDVQLFGA QYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRL KNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANAL DTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIQEVVKTLFEAIMLVFLVMYLFLQ NMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM MEDKLPPREATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL SVLVALILTPALCATLLKPVSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRY LLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKN EKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERSGDENSAEAVIHRAKMELGKIRDG FVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGL EDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRM LPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAM ALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSV MLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVV EATLMAVRMRLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFF VPVFFVVIRRCFKG >gi|296918697|gb|GG773003.1| GENE 7 8486 - 9643 816 385 aa, chain - ## HITS:1 COG:acrE KEGG:ns NR:ns ## COG: acrE COG0845 # Protein_GI_number: 16131153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 1 385 1 385 385 668 99.0 0 MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIVKTAPLEVKTELPGRTN AYRITEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQASYDSAKGELAKSEAAAAI AHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPIS GRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHKENAT SNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARIDEGV QPDAILIPQQGVSRTPRGDATVLIVNNKSQVEARPVVASQAIGDKWLISEGLKSGDQVIV SGLQKARPGEQVKATTDTPADTASK >gi|296918697|gb|GG773003.1| GENE 8 10042 - 10704 401 220 aa, chain + ## HITS:1 COG:ECs4136 KEGG:ns NR:ns ## COG: ECs4136 COG1309 # Protein_GI_number: 15833390 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 220 1 220 220 424 98.0 1e-119 MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYWHFENKTQLFN EMWLQQPSLRELIQDHLTAGLEHDPFQQLREKLIVGLQYIAKIPRQQALLKILYHKCEFN DEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLDVVMIIIDGAFSGIVQNWLMN MAGYDLYKQAPALVDNVLRMFMPDENITKLIHKTNELSVI >gi|296918697|gb|GG773003.1| GENE 9 10707 - 10886 88 59 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3748 NR:ns ## KEGG: EcE24377A_3748 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 59 10 68 68 87 100.0 2e-16 MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM >gi|296918697|gb|GG773003.1| GENE 10 10970 - 11854 697 294 aa, chain - ## HITS:1 COG:yhdJ KEGG:ns NR:ns ## COG: yhdJ COG0863 # Protein_GI_number: 16131150 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Escherichia coli K12 # 1 294 3 296 296 601 97.0 1e-172 MRTGCEPTRFGNEAKTIIQGDALTELKNLPAESVDLIFADPPYNIGKNFDGLIEAWKEDL FIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLFTIKSRIVWSYDSSGVQAK KHYGSMYEPILMMVKDAKNYTFNGDAILVEAKTGSQRALINYRKNPPQPYNHQKVPGNVW DFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDIVLDPFAGSFTTGAVAVASGRKFI GIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTGNLSKRSRLSEVDPDLIAK >gi|296918697|gb|GG773003.1| GENE 11 11942 - 12238 385 98 aa, chain - ## HITS:1 COG:ECs4133 KEGG:ns NR:ns ## COG: ECs4133 COG2901 # Protein_GI_number: 15833387 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Escherichia coli O157:H7 # 1 98 1 98 98 162 100.0 1e-40 MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN >gi|296918697|gb|GG773003.1| GENE 12 12264 - 13229 1101 321 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 1 317 28 344 353 428 65 1e-118 MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVH IDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDV VKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGE AEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHY LDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQEHAPNDQFRRTF NAIEDASEQLEALEAYFENFA >gi|296918697|gb|GG773003.1| GENE 13 13558 - 14439 1543 293 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15833385|ref|NP_312158.1| ribosomal protein L11 methyltransferase [Escherichia coli O157:H7 str. Sakai] # 1 293 1 293 293 598 100 1e-170 MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLF DAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRD VPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGKTVIDFGCGSGILAIAALKLG AAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAGPLRELA PLISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVVEKEEWCRITGRKN >gi|296918697|gb|GG773003.1| GENE 14 14451 - 15902 1566 483 aa, chain - ## HITS:1 COG:ECs4130 KEGG:ns NR:ns ## COG: ECs4130 COG4145 # Protein_GI_number: 15833384 # Func_class: H Coenzyme transport and metabolism # Function: Na+/panthothenate symporter # Organism: Escherichia coli O157:H7 # 1 483 3 485 485 796 99.0 0 MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMGGIVLAMTLTATYISAS SFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILARRYNAVTLNDMLFARYQS RLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYETGLLIFGISIALYTAFGGFRA SVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVDTLQTIDPQLVTPQGADDILSPAFMT SFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPD LTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNIRPDQM QNETRLKRMSAVITLVLGALLLLAAWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERA NAKGALSAMIVGGVLYAVLAKLNIQYLGFHPIVPSLLLSLLAFLVGNRFGTSVPQATVLT TDK >gi|296918697|gb|GG773003.1| GENE 15 15892 - 16134 330 80 aa, chain - ## HITS:1 COG:ECs4129 KEGG:ns NR:ns ## COG: ECs4129 COG3924 # Protein_GI_number: 15833383 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 80 1 80 80 149 100.0 2e-36 MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLPGVAPGFTGFPRWFEMACILTPLLFIGL CWAMVKFIYRDIPLEDDDAA >gi|296918697|gb|GG773003.1| GENE 16 16227 - 17162 415 311 aa, chain - ## HITS:1 COG:STM3251 KEGG:ns NR:ns ## COG: STM3251 COG0524 # Protein_GI_number: 16766549 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 1 311 8 314 315 375 56.0 1e-104 MGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIFAAQVAKLSHRAIFFGCVGNDDFARL IIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQQRDFVFNIPNSACGLFTAEHIDKDLL KQCNHLHIVGSSLFSFRMIDVMRKAITTIKSAGGTVSFDPNIRKEMLSIPEMAQALDYLI EYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGGVKHVAIKRAQRGASYYKLKNGTLHA QHVAGHDIEIIDPTGAGDCFGATFITLFLSGFPAHKALQYANASGALAVMRQGPMEGISS LADIEDFLQQH >gi|296918697|gb|GG773003.1| GENE 17 17194 - 18009 498 271 aa, chain - ## HITS:1 COG:STM3252 KEGG:ns NR:ns ## COG: STM3252 COG1349 # Protein_GI_number: 16766550 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 265 1 270 277 192 42.0 6e-49 MPRKSSNLLKRRLKIAEIVAAQGEIKVDDLSAQLGVSGVTIRGDLSYLEQQGYLKRSFGG AIATPLSSEPEAIQPIAPLSLAQQMEIARHCARLIRDRDTLFLGHGTICRKIIPLLSEVK KLRLITNDPEHALLANQFIDGEIILAGSEMLRPDTALAGKPLEQALQHFTITHSILEISH LDADGTLNINVPRLAAAWQLCFDHAQNKTVIVAADPAPSTAAIGHLHQAENVIVSRSINE QYQQQLQSADFVILYTSNECFTWSNRERLQE >gi|296918697|gb|GG773003.1| GENE 18 18262 - 18438 74 58 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C3696 NR:ns ## KEGG: UTI89_C3696 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 17 58 1 42 42 73 100.0 2e-12 MLKAGTAYPSDWAFFSMFLLEIIYIAAPVICRSPYKMKKENLHFHFESKLAQQKQQKA >gi|296918697|gb|GG773003.1| GENE 19 18365 - 19219 718 284 aa, chain + ## HITS:1 COG:STM3253 KEGG:ns NR:ns ## COG: STM3253 COG0191 # Protein_GI_number: 16766551 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 416 71.0 1e-116 MYIISSKNMLKKAQSEGYAVPAFNIHNLETLQVVVESAAQLRSPVMLAGTPGTYRYGGVG SLISLVQSLAREYNLPLVLHLDHHEESDDIFNKVRAGIRSVMIDGSHLPFEDNIARVQEV TTFCHRFDVSVEAELGRLGGQEDDLRVDEKDSAYTSPAAAAEFVQRTQIDSLAVAIGTAH GLYAHEPRLDFVRLEQIRQRVEIPLVLHGASGLSEQDVQHCIRRGICKVNVATELKIAFA DALKGYFYNNPAANDPRHYMQPAKAAMKEVVIRIIGVCGSEGKI >gi|296918697|gb|GG773003.1| GENE 20 19255 - 20145 903 296 aa, chain + ## HITS:1 COG:SMb21377 KEGG:ns NR:ns ## COG: SMb21377 COG1879 # Protein_GI_number: 16264703 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 3 296 2 296 296 285 60.0 8e-77 MKNIKLLGSAMLVSLALFSQSSLAKEYKIGASLLTQQHPFYIDLANAMKEEAKKDNVNLS VSIANQDLNKQLSDVEDFITKKVDAIIVSPVDSKGVQAAIIKADKAGIPVITVDVAAEGV PVVSHVATDNYAGGVEAGKLMGKLLHGKGTVAIISYPALQSVVARVDGFKKGLSDTPDIK IVAEQPGITRAEALTTAQNIMQANANLNGLFGFGDDAALAAVIAAKSAHNDNIKIIGFDG MKEACDAVDSEKTFAAVIRQYPDQMGAKAIDAAVDHLNGKPVEKMIPVQPGVYTGK >gi|296918697|gb|GG773003.1| GENE 21 20206 - 21705 181 499 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 274 486 22 223 305 74 26 6e-12 MTDVILDVSHIAKTFGHVQALKDITLSLRKGRVHTLLGENGAGKSTLMKILAGVYPPTQG TITLRGETITINNPQHSRQLGIAIIFQELSLSNNMTVAENIYANNEPRRFGIINDKKMLA DCQNLLADLGIPLDPLEMVGNMSMAHRQLVEIAKALSYAADVVIMDEPTSSLSDNEAEIL FNIIEKLKQRGCAVIYISHRMDEIMRISDDISVIRDGEYIATHEKKNSDIQHLIAQMVGR EMKNIWPARLGEKPDENVPAKLEVKNLSHPSLFKEVSFAVRPGEVLGFFGLVGAGRSDVM KALFGLVSYHGTVLIDGKEVRIANPKQAIDHGIAFVTENRKEEGLVLMHDVNMNTHHVAF QYNASRMGLINHRQEEAKTLQSIARMNTKVSSVHQAVGALSGGNQQKIVLSKWLEKTPRI LLLDEPTRGVDVGAKFEIYNVIRQLAAAGTAIILVSSELPEVMALSDRLVVMRNKTIADI YSCENLTQIQVMTAATGVR >gi|296918697|gb|GG773003.1| GENE 22 21706 - 22695 889 329 aa, chain + ## HITS:1 COG:SMb21375 KEGG:ns NR:ns ## COG: SMb21375 COG1172 # Protein_GI_number: 16264701 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Sinorhizobium meliloti # 22 328 13 319 320 300 57.0 3e-81 MTEKTLASPKPSEIPIANNFKKVFRQYGGILSGMVVLIILFSFINDSFFTANNITNIILQ VSIIAITAYGMTYVLLLGDIDLSVGSTIALIGTFAALGASWGIPFVLLVPLSIIAALTLG MINGGLTAIAGIPSFIVTVATMGIFRGIAYIVTDGMPIMIKDDAFLALGNGEFLYIPIPI WILIILLLINHFILTKTTFGRKIYITGGNKEAAIYSGINVTRLKIKVFMITAVLAGISGM ILASRLYSGQPNSALSYELDAIAAAVLGGTSLNGGYGTVVGTVIGALTIGVINNGMNLMN VPYFYQMVVKGLVILVAVYFDVRNKRKRS >gi|296918697|gb|GG773003.1| GENE 23 22717 - 23679 704 320 aa, chain + ## HITS:1 COG:STM3251 KEGG:ns NR:ns ## COG: STM3251 COG0524 # Protein_GI_number: 16766549 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 4 312 5 315 315 358 54.0 1e-98 MSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGN DGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQH VDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRD ALHFVLELTDIYMPSEGEVLLLSPHSTPERAIAGFLEEGVKEVIVKRGNQGASYYSANEQ FHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDAHRALQYANACGALAVTRRGPMEGTSR LMEIETFIQRHDMSIREAAQ >gi|296918697|gb|GG773003.1| GENE 24 23676 - 24722 794 348 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3633 NR:ns ## KEGG: ECS88_3633 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 348 1 348 348 725 100.0 0 MKNEIWSWIGDLSQVAGIKHYELRSGRAKGTEAFDVRTGAGLAFTVVKDRALDIAWASYK DTALSFITPNGVVAPAFFESQGNGFLRSFYAGLLTTCGLSYIGTPCEDEGETLGLHGRLA ATPAEEVGYRTERTDDSIEFVINGKVRETRLFGENLTLERTIRCRYGENVMRIEDKVTNH GFTRQPLQILYHFNYGWPLLSPQAEILLSAKSITPRTPHAAEGLASHLEICTPQPGFDEQ VYYLTLNSDSQGMSKVALVNAELGWGIYEKFDTMQLPNFIQWKNLGAGEYVMGLEVSNSF PDGRDKERAQGRLPFIEPGETKTYCFELGIVDGDAEISALKAEIASYR >gi|296918697|gb|GG773003.1| GENE 25 24814 - 26163 1376 449 aa, chain - ## HITS:1 COG:accC KEGG:ns NR:ns ## COG: accC COG0439 # Protein_GI_number: 16131144 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Escherichia coli K12 # 1 449 1 449 449 882 99.0 0 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSY LNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAI AAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRSDAELAQ SISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVV EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVT EMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAP GGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDL QIRIMNDENFQHGGTNIHYLEKKLGLQEK >gi|296918697|gb|GG773003.1| GENE 26 26174 - 26644 427 156 aa, chain - ## HITS:1 COG:ECs4127 KEGG:ns NR:ns ## COG: ECs4127 COG0511 # Protein_GI_number: 15833381 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 246 100.0 2e-65 MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVMQQAYAAPMMQQPAQSN AAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEA MKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE >gi|296918697|gb|GG773003.1| GENE 27 27421 - 27585 89 54 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C3685 NR:ns ## KEGG: UTI89_C3685 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 54 1 54 54 98 100.0 8e-20 MKSLFNRLTEKAVSRTAFVEHLGQEVVQHHPNWKVMISTDHKLMRIDTPPNSHY >gi|296918697|gb|GG773003.1| GENE 28 27622 - 28596 1146 324 aa, chain - ## HITS:1 COG:ECs4125 KEGG:ns NR:ns ## COG: ECs4125 COG0604 # Protein_GI_number: 15833379 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 629 98.0 1e-180 MQALLLEQQDGKTLASVQTLDESRQPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI PGIDFAGTVRTSEDPRFHAGQEVLLTGWGIGENHWGGLAEQARVKGDWLVAMPQGLDARK AMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR ESTHEYLKSLGASRILPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAAC GLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPARRAQAWQRLVADLPESFYTQAAKEISL AEAPKFAEAIINNQIQGRTLVKVN >gi|296918697|gb|GG773003.1| GENE 29 28748 - 30688 1227 646 aa, chain + ## HITS:1 COG:ECs4124_3 KEGG:ns NR:ns ## COG: ECs4124_3 COG2200 # Protein_GI_number: 15833378 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 395 646 1 252 252 495 98.0 1e-139 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFST LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGTNDLFRELSVPLIKHPGMSLR LVYQDPMGNYFHSLMTTAPLTGAIGFIILMLFLAVRWLQRQLAGQELLETRATRILNGER GSNVLGTIYEWPPRTSSALDTLLCEIQNAREQHSRLDTLIRSYAAQDMKTGLNNRLFFDN QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFSLTNLLSTFMMRYPGAL LARYHRSDFAALLPHRTLKEAESIASQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV TREGRVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLLISRLIPLLRYWPEENL AIQVTVESLIRPRFQRWLRDTLMQCEKSQRRRIIIELAEADVGQHISRLQPVIRLVNALG VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV >gi|296918697|gb|GG773003.1| GENE 30 30993 - 32036 1117 347 aa, chain + ## HITS:1 COG:ECs4123 KEGG:ns NR:ns ## COG: ECs4123 COG1077 # Protein_GI_number: 15833377 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Escherichia coli O157:H7 # 1 347 21 367 367 649 100.0 0 MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAK QMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQ VERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNG VVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRN LAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALL RNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE >gi|296918697|gb|GG773003.1| GENE 31 32102 - 33205 1118 367 aa, chain + ## HITS:1 COG:ECs4122 KEGG:ns NR:ns ## COG: ECs4122 COG1792 # Protein_GI_number: 15833376 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 591 98.0 1e-168 MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDTAVSPFYFVSNAPRELL DGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENARLRELLGSPLRQDEQKMV TQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATHA LPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVSS VKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNGANPMTPEEVHRVANERLMQMMPQV LPSPDAMGPKLPEPATGITQPTPQQPATGNAVTAPAAPTQPAANRSPQRATPPQSGAQPP ARAPGGQ >gi|296918697|gb|GG773003.1| GENE 32 33205 - 33693 439 162 aa, chain + ## HITS:1 COG:ECs4121 KEGG:ns NR:ns ## COG: ECs4121 COG2891 # Protein_GI_number: 15833375 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 227 100.0 6e-60 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ >gi|296918697|gb|GG773003.1| GENE 33 33702 - 34295 558 197 aa, chain + ## HITS:1 COG:yhdE KEGG:ns NR:ns ## COG: yhdE COG0424 # Protein_GI_number: 16131136 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli K12 # 1 197 1 197 197 367 97.0 1e-102 MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQT AQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLV VTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFVRKINGSFHAVVGLPLVETYE LLSNFNALREKRDKHDG >gi|296918697|gb|GG773003.1| GENE 34 34285 - 35754 1562 489 aa, chain + ## HITS:1 COG:ZcafA KEGG:ns NR:ns ## COG: ZcafA COG1530 # Protein_GI_number: 15803780 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Escherichia coli O157:H7 EDL933 # 1 489 7 495 495 917 100.0 0 MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT TDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEA ELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLTYE ALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV LHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETV CYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQIEPLYN QEQFDVVMM >gi|296918697|gb|GG773003.1| GENE 35 35822 - 39622 3155 1266 aa, chain + ## HITS:1 COG:yhdR+P KEGG:ns NR:ns ## COG: yhdR+P COG3164 # Protein_GI_number: 16132254 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 1266 1 1266 1266 2501 99.0 0 MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKIESATGMPVEASQLSAS WQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTP ITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHR AEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALET AQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKETHTLSVDNLTAHITRENPGWQFSIP DTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRSDELRIRASNLELAGLEGVRPLVAKLS PALGDVWRSTQPSGKINTLALDIPLQAADKTRFQASWSDLAWKQWKLLPGAEHFSGTLSG SVENGLLTASMKQAKMPYETVFRAPLEIADGQATISWLNNDKGFQLDGRNIDVKAKAVHA RGGFRYLQPANDEPWLGILAGISTDDGSQAWRYFPENLMGKDLVDYLSGAIQGGEADNAT LVYGGNPQLFPYKHNEGQFEVLVPLRNAKFAFQPDWPALTNLDIELDFINDGLWMKTDGV NLGGVRASNLTAVIPDYSKEKLLIDADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGD VNARLHLDIPLNGELVTAKGEVTLRNNSLFIKPLDSTLKNLSGKFSFINGDLQSEPLTAS WFNQPLNVDFSTKEGAKAYQVAVNLNGNWQPAKTGVLPVAVNEALSGSVAWDGKVGIDLP YHAGATYNVELNGDLKNVSSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGADNHFN SRWLLGQKLTLDRAIWAADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAA SFPQHITLRTPMLSLGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIK YLYYNPSVAKTRGDSTQSSPFPTTERINFRGWPDAQIRCAECWFWGQKFGRIDSDITISG DTLTLTNGLIDTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSS FNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRF DFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVA PEISATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQP RKEKAQ >gi|296918697|gb|GG773003.1| GENE 36 39778 - 40392 811 204 aa, chain + ## HITS:1 COG:tldD KEGG:ns NR:ns ## COG: tldD COG0312 # Protein_GI_number: 16131134 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Escherichia coli K12 # 1 196 1 196 481 366 100.0 1e-101 MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSY NIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLY TSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVR PLVRLSVSVLVEEDGKRERGASGG >gi|296918697|gb|GG773003.1| GENE 37 40526 - 41275 897 249 aa, chain + ## HITS:1 COG:ECs4117 KEGG:ns NR:ns ## COG: ECs4117 COG0312 # Protein_GI_number: 15833371 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Escherichia coli O157:H7 # 1 249 233 481 481 485 100.0 1e-137 MALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASE LCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRR ESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYL IENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKV DNLTVGGTA >gi|296918697|gb|GG773003.1| GENE 38 41403 - 42332 785 309 aa, chain - ## HITS:1 COG:ECs4116 KEGG:ns NR:ns ## COG: ECs4116 COG0583 # Protein_GI_number: 15833370 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 623 100.0 1e-178 MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRSTRSIGLTE AGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLAGLTAKMLKEYPG LSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVCAAKSYLTQYGIPEK PADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGAGIAYVP LMWVINEINRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINSLTDYFVEVGKLFQ EMHGRGKEK >gi|296918697|gb|GG773003.1| GENE 39 42515 - 42718 130 67 aa, chain + ## HITS:1 COG:no KEGG:G2583_3962 NR:ns ## KEGG: G2583_3962 # Name: aaeX # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 67 24 90 90 103 100.0 3e-21 MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFVWHPALFNTALYCCLFY LISRLFV >gi|296918697|gb|GG773003.1| GENE 40 42726 - 43658 973 310 aa, chain + ## HITS:1 COG:yhcQ KEGG:ns NR:ns ## COG: yhcQ COG1566 # Protein_GI_number: 16131131 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 310 1 310 310 579 99.0 1e-165 MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQ VNVHDNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMS REEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGS TAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTR DDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWPAGTTATVVVTGKQDRDESQDSFFR KMAHRLREFG >gi|296918697|gb|GG773003.1| GENE 41 43664 - 45583 1100 639 aa, chain + ## HITS:1 COG:yhcP KEGG:ns NR:ns ## COG: yhcP COG1289 # Protein_GI_number: 16131130 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 639 1 639 655 1233 98.0 0 MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYS GAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYA WGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIMADFLFFPRSIKQEVDREL ESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQGMRSNLNMESSRWARANRRLKA INTLSLTLITQSCETYLIQNTRPELITDTFREFFDTPVETAQDVHKQLKRLRRVIAWTGE RETPVTIYSWVAAATRYQLLKRGVISNTKINATEEEILQGEPEVKVESAERHHAMVNFWR TTLSCILGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRMVAIDFIYGTLAALPLGLL YFLVIIPNTQQSMLLLCISLAVLGFFLGIEVQKRRLGSMGALASTINIIVLDNPMTFHFS QFLDSALGQIVGCVLAFTVILLVRDKSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLP ALYQQLFLLMNKFPGDLPKFRLALTMIIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVIS ARSDDKRRRYFGQLLEEREIYQKKLRIGQAPPQVTEPVH >gi|296918697|gb|GG773003.1| GENE 42 45666 - 45938 353 90 aa, chain + ## HITS:1 COG:ECs4112 KEGG:ns NR:ns ## COG: ECs4112 COG2732 # Protein_GI_number: 15833366 # Func_class: K Transcription # Function: Barstar, RNAse (barnase) inhibitor # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 158 100.0 3e-39 MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLPLEIEFVHLGE KTRRRFGALILLFDEAEEELEGHLRFNVRH >gi|296918697|gb|GG773003.1| GENE 43 45993 - 46256 332 87 aa, chain - ## HITS:1 COG:no KEGG:APECO1_3206 NR:ns ## KEGG: APECO1_3206 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 87 18 104 104 133 100.0 3e-30 MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKA EEKGATAYQITEARSGDTWHATAELYK >gi|296918697|gb|GG773003.1| GENE 44 46620 - 47090 550 156 aa, chain - ## HITS:1 COG:ECs4110 KEGG:ns NR:ns ## COG: ECs4110 COG1438 # Protein_GI_number: 15833364 # Func_class: K Transcription # Function: Arginine repressor # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 291 99.0 3e-79 MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRN AKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEG ILGTIAGDDTIFTTPANGFTVKELYEAILELFDQEL >gi|296918697|gb|GG773003.1| GENE 45 47525 - 48463 1317 312 aa, chain + ## HITS:1 COG:ECs4109 KEGG:ns NR:ns ## COG: ECs4109 COG0039 # Protein_GI_number: 15833363 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 557 100.0 1e-159 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV TILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR ALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLK KDIALGEEFVNK >gi|296918697|gb|GG773003.1| GENE 46 48526 - 49593 1102 355 aa, chain - ## HITS:1 COG:ECs4108 KEGG:ns NR:ns ## COG: ECs4108 COG0265 # Protein_GI_number: 15833362 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli O157:H7 # 1 355 1 355 355 645 100.0 0 MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVN VYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVG SDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIG LNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQL ATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQV NDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPATN >gi|296918697|gb|GG773003.1| GENE 47 49683 - 51050 1405 455 aa, chain - ## HITS:1 COG:degQ KEGG:ns NR:ns ## COG: degQ COG0265 # Protein_GI_number: 16131124 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli K12 # 1 455 1 455 455 776 99.0 0 MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAPMLEKVLPAVVSVRVEG TASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINANKGYVLTNNHVINQAQKISIQ LNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQT ATSGIISALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSV GIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPG SGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDT STSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRD RVNSIAEMRKVLAAKPAIIALQIVRGNESLYLLMR >gi|296918697|gb|GG773003.1| GENE 48 51204 - 51602 528 132 aa, chain - ## HITS:1 COG:STM3347 KEGG:ns NR:ns ## COG: STM3347 COG3105 # Protein_GI_number: 16766642 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 132 3 134 134 229 96.0 9e-61 MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSA ELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQMPRDYSEG ASGLLRTGAKRD >gi|296918697|gb|GG773003.1| GENE 49 51952 - 52923 668 323 aa, chain + ## HITS:1 COG:ECs4105 KEGG:ns NR:ns ## COG: ECs4105 COG1485 # Protein_GI_number: 15833359 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 323 53 375 375 650 98.0 0 MARVGKLWGKREDTKHMPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRV HEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVA TSNIPPDELYRNGLQRARFLPAIDAIKRHCDVMNVDAGVDYRLRTLTQAHLWLSPLNDET RAQMDKLWLALAGAKRENSPTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALS RLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGERLKFEF QRCLSRLQEMQSEEYLKREHLAG >gi|296918697|gb|GG773003.1| GENE 50 53068 - 53571 881 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|226956764|ref|YP_002807559.1| 50S ribosomal subunit protein L13 [Escherichia sp. 1_1_43] # 1 167 1 167 167 343 99 4e-93 MSCEPQQLKTFGCSPTCNYLLGKLLMKTFTAKPETVKRDWYVVDATGKTLGRLATELARR LRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIAR RPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI >gi|296918697|gb|GG773003.1| GENE 51 53587 - 53979 650 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803764|ref|NP_289798.1| 30S ribosomal protein S9 [Escherichia coli O157:H7 EDL933] # 1 130 1 130 130 254 100 2e-66 MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEK LDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRK ARRRPQFSKR >gi|296918697|gb|GG773003.1| GENE 52 54374 - 55012 663 212 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase [Haemophilus influenzae R2866] # 1 203 1 203 212 259 62 8e-68 MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVP TLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIING SASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGPGA KELKGYMTRVFERDSFLASLTEAEREMRLGRS >gi|296918697|gb|GG773003.1| GENE 53 55018 - 55515 491 165 aa, chain + ## HITS:1 COG:ECs4101 KEGG:ns NR:ns ## COG: ECs4101 COG2969 # Protein_GI_number: 15833355 # Func_class: R General function prediction only # Function: Stringent starvation protein B # Organism: Escherichia coli O157:H7 # 1 133 1 133 165 250 99.0 7e-67 MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAV GNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEDASIMNDE EASADNETVMSVIDGDKPDHDDETHPDDEPPQPPRGGRPALRVVK >gi|296918697|gb|GG773003.1| GENE 54 55632 - 56414 920 260 aa, chain + ## HITS:1 COG:ECs4099 KEGG:ns NR:ns ## COG: ECs4099 COG2186 # Protein_GI_number: 15833353 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 260 4 263 263 479 98.0 1e-135 MNAFDPQAEDSTTTIGRNLRSRPLARKKLSEMVEEELEQMIRRREFGEGEQLPSERELMA FFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIIGELSGMAKDFLSHPGGIAH FEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLAEIP GNPIFMAIHVALLDWLIAARPTVADQALHEHNNVSYQQHIAIVDAIRRHDPDEADRALQS HLNSVSATWHAFGQTTNKKK >gi|296918697|gb|GG773003.1| GENE 55 56536 - 57429 961 297 aa, chain + ## HITS:1 COG:ECs4098 KEGG:ns NR:ns ## COG: ECs4098 COG0329 # Protein_GI_number: 15833352 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 595 100.0 1e-170 MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSERE QVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCD HYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRRE HPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECN KVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQERG >gi|296918697|gb|GG773003.1| GENE 56 57538 - 59028 1824 496 aa, chain + ## HITS:1 COG:ECs4097 KEGG:ns NR:ns ## COG: ECs4097 COG0477 # Protein_GI_number: 15833351 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 496 11 506 506 915 99.0 0 MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLTEVQGEFGLTTVQAASL ISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLACGFAPGYITMFIARLVIGM GMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVAAQVYSLVVPVWGWRALFFIG ILPIIFALWLRKNIPEAEDWKEKHGGKAPVRTMVDILYRGEHRIANIVMTLAAATALWFC FAGNLQNAAIVAVLGLLCAAIFISFMVQSTGKRWPTGVMLMVVVLFAFLYSWPIQALLPT YLKTDLAYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLASQLLIIPVFA IGGANVWVLGLLLFFQQMLGQGIAGILPKLIGGYFDTDQRAAGLGFTYNVGALGGALAPI LGALIAQRLDLGTALASLSFSLTFVVILLIGLDMPSRVQRWLRPEALRTHDAIDGKPFSG AVPFGSAKNDLVKTKS >gi|296918697|gb|GG773003.1| GENE 57 59076 - 59765 759 229 aa, chain + ## HITS:1 COG:nanE KEGG:ns NR:ns ## COG: nanE COG3010 # Protein_GI_number: 16131113 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Escherichia coli K12 # 1 229 1 229 229 400 99.0 1e-112 MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQAGAGAIRIEGVANLQA TRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLA RIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTPETPEEPDLALVKTLSDAGCR VIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAVL >gi|296918697|gb|GG773003.1| GENE 58 59762 - 60637 322 291 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 6 290 8 317 323 128 30 3e-28 MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPQALRDALSALVSPLQAHAQRVA IASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEYQALDGD ITDMVFITVSTGVGGGVVSGGKLRTGPGGLAGHIGHTLADPHGPACGCGRTGCVEAIASG RGIATAAQGELAGANAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVG GSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGEIL >gi|296918697|gb|GG773003.1| GENE 59 60634 - 61098 365 154 aa, chain + ## HITS:1 COG:yhcH KEGG:ns NR:ns ## COG: yhcH COG2731 # Protein_GI_number: 16131111 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli K12 # 1 154 1 154 154 279 98.0 1e-75 MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEK KAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSAIENEQAIILKPGMF AVFMPGEPHKPGCVVGEPGEIKKVVVKIKADLMA >gi|296918697|gb|GG773003.1| GENE 60 61166 - 62584 1507 472 aa, chain - ## HITS:1 COG:gltD KEGG:ns NR:ns ## COG: gltD COG0493 # Protein_GI_number: 16131103 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 1 472 1 472 472 973 99.0 0 MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQADRCLSCGNPYCEWKCP VHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIG NIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLACADVLTRNGVKAVVFDRHPE IGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLGVG TYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGETNDEPFVSMEGKRVVVLGGGDTAM DCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFNIQPLGIEVNGNGKVS GVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPADAVIMAFGFRPHNMEWLAKHSVELDSQG RIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGIMNWLEV >gi|296918697|gb|GG773003.1| GENE 61 62597 - 67057 4603 1486 aa, chain - ## HITS:1 COG:ECs4091_2 KEGG:ns NR:ns ## COG: ECs4091_2 COG0069 # Protein_GI_number: 15833345 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Escherichia coli O157:H7 # 379 1194 1 816 816 1644 99.0 0 MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQ KPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIVEEELQRETLSIVGWRDVP TNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLEADKDFYVCSLS NLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGE INTITGNRQWARARTYKFQTPLIPDLHDAAPFVNETGSDSSSMDNMLELLLAGGMDIIRA MRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGLRPAR YVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRSGRILHSAETDDDLKSRH PYKEWMEKNVRRLVPFEDLPDEEVGSRELDDDTLASYQKQFNYSAEELDSVIRVLGENGQ EAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNVF CEAEGQAHRLSFKSPILLYSDFKQLTTMKEDHYRADTLDITFDVTKTTLEATVKELCDKA EKMVRSGTVLLVLSDRNIAKDRLPVPAPMAVGAIQTRLVEQSLRCDANIIVETASARDPH HFAVLLGFGATAIYPYLAYETLGRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGIS TIASYRCSKLFEAVGLHDDVVGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQ GGLLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGE NAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYG TNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSV PGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADL ITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDII KAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYF EFIARETRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALY CTENNPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQG LAADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCILGK TGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLSVDDLAIHEEHLRGLITEHVQHTGS QRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ >gi|296918697|gb|GG773003.1| GENE 62 67756 - 68661 845 301 aa, chain + ## HITS:1 COG:ECs4090 KEGG:ns NR:ns ## COG: ECs4090 COG1242 # Protein_GI_number: 15833344 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 300 9 308 309 628 99.0 1e-180 MFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQHRSIAEQLA HQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLD LLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGL PGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEM IRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSALGRPWLPPT A >gi|296918697|gb|GG773003.1| GENE 63 68757 - 71093 2647 778 aa, chain + ## HITS:1 COG:ZarcB_1 KEGG:ns NR:ns ## COG: ZarcB_1 COG0642 # Protein_GI_number: 15803750 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 562 1 562 562 1055 100.0 0 MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIF FGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDLSLNVQLKDNIAQLNQEIA VREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGC NRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKA CFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNG IVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTS FLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVT VRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLA KNMGGDITVTSEQGKGSTFTLTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVIV ARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDL PPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSK SEALLDIPMLEQYLELVGPKLITDGLAVFERMMPGYVSVLESNLTAQDKKGIVEEGHKIK GAAGSVGLRHLQQLGQQIQSPDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK >gi|296918697|gb|GG773003.1| GENE 64 71323 - 71976 773 217 aa, chain + ## HITS:1 COG:yhbL KEGG:ns NR:ns ## COG: yhbL COG3155 # Protein_GI_number: 16131099 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in an early stage of isoprenoid biosynthesis # Organism: Escherichia coli K12 # 1 217 4 220 220 405 99.0 1e-113 MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTET RNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAVKNLSNFASLGSECTVDRELKAL AQAMHQAGKPLGFMCIAPAILPKIFDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVDDIVV DEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE >gi|296918697|gb|GG773003.1| GENE 65 71994 - 72701 527 235 aa, chain + ## HITS:1 COG:mtgA KEGG:ns NR:ns ## COG: mtgA COG0744 # Protein_GI_number: 16131098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Escherichia coli K12 # 1 235 8 242 242 454 98.0 1e-128 MFSFVRRFLLRLMVVLAIFWGGGIALFSVAPVPFSAVMVERQVSAWLHGNFRYVAHSDWV SMDQISPWMGLAVIAAEDQKFPEHWGFDVASIEQALAHNERNENRIRGASTISQQTAKNL FLWDGRSWVRKGLEAGLTLGIETVWSKKRILTVYLNIAEFGDGVFGVEAAAQRYFHKPAS KLTRSEAALLAAVLPNPLRFKVSAPSGYVRSRQAWILRQMYQLGGEPFMQQHQLD >gi|296918697|gb|GG773003.1| GENE 66 72698 - 73330 524 210 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3591 NR:ns ## KEGG: ECS88_3591 # Name: yrbL # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 210 1 210 210 425 100.0 1e-118 MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDW SGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRY LQDNRIVTMSLKPQNILCHRISESEVTPVVCDNIGESTLIPLATWSKWCCLRKQERLWKR FIAQPALAIALQKDLQPRESKTLALTSREA >gi|296918697|gb|GG773003.1| GENE 67 73544 - 73816 298 90 aa, chain - ## HITS:1 COG:ECs4085 KEGG:ns NR:ns ## COG: ECs4085 COG1925 # Protein_GI_number: 15833339 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 149 100.0 2e-36 MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEAEANSVIALLMLDSAKG RQIEVEATGPQEEEALAAVIALFNSGFDED >gi|296918697|gb|GG773003.1| GENE 68 73813 - 74667 841 284 aa, chain - ## HITS:1 COG:ECs4084 KEGG:ns NR:ns ## COG: ECs4084 COG1660 # Protein_GI_number: 15833338 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 556 100.0 1e-158 MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREISAAVSIDVRNM PESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKES DLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV FDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY LTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKP >gi|296918697|gb|GG773003.1| GENE 69 74713 - 75204 367 163 aa, chain - ## HITS:1 COG:ptsN KEGG:ns NR:ns ## COG: ptsN COG1762 # Protein_GI_number: 16131094 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 1 163 1 163 163 299 99.0 1e-81 MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLAPQVVFEAILTREKM GSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFALLVPADQTKTH LHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTPDEA >gi|296918697|gb|GG773003.1| GENE 70 75322 - 75609 462 95 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227335124|ref|ZP_03838780.1| hypothetical protein CIT292_04930 [Citrobacter youngae ATCC 29220] # 1 95 1 95 95 182 94 2e-44 MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVEKVTHTSDATLHVNGGE IHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH >gi|296918697|gb|GG773003.1| GENE 71 75632 - 77065 1416 477 aa, chain - ## HITS:1 COG:ECs4081 KEGG:ns NR:ns ## COG: ECs4081 COG1508 # Protein_GI_number: 15833335 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 873 100.0 0 MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQIDTHEEIDTRE TQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSGDYIDDELPVYQGETTQTL QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLEDILESMGDEEIDIDEVEAVLK RIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARLIISDHLDLLANHDFRTLMRVTR LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN QHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV >gi|296918697|gb|GG773003.1| GENE 72 77113 - 77838 287 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 2 235 3 233 305 115 31 3e-24 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI IIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANE LMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRII EHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYLGEDFR L >gi|296918697|gb|GG773003.1| GENE 73 77845 - 78402 585 185 aa, chain - ## HITS:1 COG:ECs4079 KEGG:ns NR:ns ## COG: ECs4079 COG1934 # Protein_GI_number: 15833333 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 330 100.0 1e-90 MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIV TQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDF VVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRVTTVLVPSQLQDKNNKGQTPA QKKGN >gi|296918697|gb|GG773003.1| GENE 74 78371 - 78946 412 191 aa, chain - ## HITS:1 COG:ECs4078 KEGG:ns NR:ns ## COG: ECs4078 COG3117 # Protein_GI_number: 15833332 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 354 100.0 7e-98 MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSY RLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNAL VPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRT SYEIQNKQTQP >gi|296918697|gb|GG773003.1| GENE 75 78943 - 79509 736 188 aa, chain - ## HITS:1 COG:ECs4077 KEGG:ns NR:ns ## COG: ECs4077 COG1778 # Protein_GI_number: 15833331 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 354 99.0 5e-98 MSKAGASLATCYGPVSADVMAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL DEAKGQSI >gi|296918697|gb|GG773003.1| GENE 76 79530 - 80516 874 328 aa, chain - ## HITS:1 COG:yrbH_1 KEGG:ns NR:ns ## COG: yrbH_1 COG0794 # Protein_GI_number: 16131087 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 1 212 1 212 212 424 100.0 1e-118 MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKS GHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLK RLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLK ARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMT VICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSR HITSVMVADGDHLLGVLHMHDLLRAGVV >gi|296918697|gb|GG773003.1| GENE 77 80530 - 81507 690 325 aa, chain - ## HITS:1 COG:ECs4075 KEGG:ns NR:ns ## COG: ECs4075 COG0530 # Protein_GI_number: 15833329 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/Na+ antiporter # Organism: Escherichia coli O157:H7 # 1 325 1 325 325 480 99.0 1e-135 MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTVVSIGTSLPEIIVSLAA SLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLRRELPLMLLVSVVAGSVLY DGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTREQLAELPREGGLPVAFLWLG IALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAIGTSLPELATAIAGVRKGENDIA VGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDYSVMLLVSIIFALLCWRRSPQPGRG VGVLLTGGFIVWLAMLYWLSPILVE >gi|296918697|gb|GG773003.1| GENE 78 81717 - 82526 299 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 8 247 1 242 245 119 30 1e-25 MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP DHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPL LHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITM GVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRV RQFLDGIADGPVPFRYPAGDYHADLLPGS >gi|296918697|gb|GG773003.1| GENE 79 82534 - 83316 742 260 aa, chain + ## HITS:1 COG:ECs4073 KEGG:ns NR:ns ## COG: ECs4073 COG0767 # Protein_GI_number: 15833327 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Escherichia coli O157:H7 # 1 260 1 260 260 438 100.0 1e-123 MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIV VSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEI GLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGI DSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVV HSSLAVLGLDFVLTALMFGN >gi|296918697|gb|GG773003.1| GENE 80 83321 - 83872 646 183 aa, chain + ## HITS:1 COG:ECs4072 KEGG:ns NR:ns ## COG: ECs4072 COG1463 # Protein_GI_number: 15833326 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 335 100.0 3e-92 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI GGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFED PELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVG TTK >gi|296918697|gb|GG773003.1| GENE 81 83891 - 84526 866 211 aa, chain + ## HITS:1 COG:ECs4071 KEGG:ns NR:ns ## COG: ECs4071 COG2854 # Protein_GI_number: 15833325 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 393 99.0 1e-109 MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPQIRANPDYLRTIV DQELLPYVQVKYAGALVLGQYYKSATPAQRDAYFAAFREYLKQAYGQALAMYHGQTYQIA PEQPLGDKIIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQNE WGTLLRTKGIDGLTAQLKSISQQKITLEEKK >gi|296918697|gb|GG773003.1| GENE 82 84526 - 84819 332 97 aa, chain + ## HITS:1 COG:yrbB KEGG:ns NR:ns ## COG: yrbB COG3113 # Protein_GI_number: 16131081 # Func_class: R General function prediction only # Function: Predicted NTP binding protein (contains STAS domain) # Organism: Escherichia coli K12 # 1 97 33 129 129 164 97.0 3e-41 MSESLSWMQTGDTLALSGELDQDVLLPLWEIREEAVKGITSIDLSRVSRVDTGGLALLLH LIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR >gi|296918697|gb|GG773003.1| GENE 83 84964 - 85233 312 89 aa, chain + ## HITS:1 COG:ECs4069 KEGG:ns NR:ns ## COG: ECs4069 COG5007 # Protein_GI_number: 15833323 # Func_class: K Transcription # Function: Predicted transcriptional regulator, BolA superfamily # Organism: Escherichia coli O157:H7 # 1 89 1 89 89 179 100.0 1e-45 MIEDPMENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVKKQQTVYGPLME YIADNRIHAVSIKAYTPAEWARDRKLNGF >gi|296918697|gb|GG773003.1| GENE 84 85288 - 86547 1424 419 aa, chain + ## HITS:1 COG:murA KEGG:ns NR:ns ## COG: murA COG0766 # Protein_GI_number: 16131079 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Escherichia coli K12 # 1 419 1 419 419 812 100.0 0 MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQL GAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCTIGAR PVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMCAATLAEGTT IIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGVERLGGGVYRVLPDRIETGTFLV AAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVGEDWISLDMHGKRPKAVNVRTAPHP AFPTDMQAQFTLLNLVAEGTGFITETVFENRFMHVPELSRMGAHAEIESNTVICHGVEKL SGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKGE >gi|296918697|gb|GG773003.1| GENE 85 86595 - 86873 309 92 aa, chain - ## HITS:1 COG:Znlp KEGG:ns NR:ns ## COG: Znlp COG3423 # Protein_GI_number: 15803728 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 1 92 1 92 92 171 98.0 4e-43 MESNFIDWHPADIIAGLRKKETSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTD PWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK >gi|296918697|gb|GG773003.1| GENE 86 87171 - 88142 1027 323 aa, chain - ## HITS:1 COG:ispB KEGG:ns NR:ns ## COG: ispB COG0142 # Protein_GI_number: 16131077 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Escherichia coli K12 # 1 323 1 323 323 624 99.0 1e-178 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVG YEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAF QMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQ CSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPL LHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQ VLPDTPWREALVGLAHIAVQRDR >gi|296918697|gb|GG773003.1| GENE 87 88377 - 88712 562 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224585100|ref|YP_002638899.1| 50S ribosomal protein L21 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] # 1 111 1 111 111 221 97 4e-56 MCAEAEFYMYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVP FVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA >gi|296918697|gb|GG773003.1| GENE 88 88733 - 88990 437 85 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803725|ref|NP_289759.1| 50S ribosomal protein L27 [Escherichia coli O157:H7 EDL933] # 1 85 1 85 85 172 100 1e-41 MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLF AKADGKVKFEVKGPKNRKFISIEAE >gi|296918697|gb|GG773003.1| GENE 89 89117 - 90082 751 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145636992|ref|ZP_01792656.1| 50S ribosomal protein L27 [Haemophilus influenzae PittHH] # 1 303 1 300 306 293 49 5e-78 MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFLMASIGLGAILAVKKRL PPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFIL KEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWGVIFGVGAATVWVSYGVAQKV LLRRLASPQILFLLYALCTIALFPLANPGVIAQLSHWQLACLIFCGLNTLVGYGALAEAM ARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIG HRIWGGLRKHTTVVSQPRAGE >gi|296918697|gb|GG773003.1| GENE 90 90098 - 91270 1461 390 aa, chain + ## HITS:1 COG:ECs4062 KEGG:ns NR:ns ## COG: ECs4062 COG0536 # Protein_GI_number: 15833316 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 390 1 390 390 689 100.0 0 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV LLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAKPRWLVFNKIDLLDKVEAEEKAKAI AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQ LEEIAEEDDEDWDDDWDEDDEEGVEFIYKR >gi|296918697|gb|GG773003.1| GENE 91 91377 - 92696 981 439 aa, chain - ## HITS:1 COG:dacB KEGG:ns NR:ns ## COG: dacB COG2027 # Protein_GI_number: 16131072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Escherichia coli K12 # 1 439 39 477 477 880 99.0 0 MVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLK GDLVARFGADPTLRRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQ CFSAPPAAAIVDRNCFSISLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTVSGQRMAFVQYLSGYAVEPADQRNR RIPLVRFESRLYKDIYQNN >gi|296918697|gb|GG773003.1| GENE 92 93058 - 93534 566 158 aa, chain + ## HITS:1 COG:STM3299 KEGG:ns NR:ns ## COG: STM3299 COG0782 # Protein_GI_number: 16766595 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Salmonella typhimurium LT2 # 1 158 1 158 158 282 96.0 2e-76 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL >gi|296918697|gb|GG773003.1| GENE 93 93690 - 93983 454 97 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|188532496|ref|YP_001906293.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Erwinia tasmaniensis Et1/99] # 1 97 1 97 97 179 93 1e-43 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR >gi|296918697|gb|GG773003.1| GENE 94 94109 - 94738 595 209 aa, chain + ## HITS:1 COG:ECs4058 KEGG:ns NR:ns ## COG: ECs4058 COG0293 # Protein_GI_number: 15833312 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 409 100.0 1e-114 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA APGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQV VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS LFTKVKVRKPDSSRARSREVYIVATGRKP >gi|296918697|gb|GG773003.1| GENE 95 94829 - 96772 1683 647 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 599 1 597 636 652 56 0.0 MSDMAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREIN VTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWI FFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRF QKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMF EQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFS GADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAG HAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEE IIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHM SDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARRD VRPPAGWEEPGASNNSGDNGSPKAPRPVDEPRTPNPGNTMSEQLGDK >gi|296918697|gb|GG773003.1| GENE 96 96902 - 97750 864 282 aa, chain + ## HITS:1 COG:ECs4056 KEGG:ns NR:ns ## COG: ECs4056 COG0294 # Protein_GI_number: 15833310 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Escherichia coli O157:H7 # 1 282 16 297 297 555 99.0 1e-158 MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLLDAVKHANLMINAGATIIDVGGE STRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSL SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKE KLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSL ACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAKENKRYE >gi|296918697|gb|GG773003.1| GENE 97 97743 - 99080 1544 445 aa, chain + ## HITS:1 COG:mrsA KEGG:ns NR:ns ## COG: mrsA COG1109 # Protein_GI_number: 16131066 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Escherichia coli K12 # 1 445 1 445 445 834 99.0 0 MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLES ALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTK LPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIEFCKATFPNELSLSELKIVVD CANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAF DGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIP FARAKVGDRYVLEKMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLH DLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEAALGSRGRVLLRKSGTEPLIR VMVEGEDEAQVTEFAHRIADAVKAV >gi|296918697|gb|GG773003.1| GENE 98 99308 - 99640 402 110 aa, chain + ## HITS:1 COG:ECs4054 KEGG:ns NR:ns ## COG: ECs4054 COG1314 # Protein_GI_number: 15833308 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 185 100.0 2e-47 MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLA TLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPAKPTSDIPN >gi|296918697|gb|GG773003.1| GENE 99 100195 - 101820 535 541 aa, chain + ## HITS:1 COG:yhbX KEGG:ns NR:ns ## COG: yhbX COG2194 # Protein_GI_number: 16131064 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 541 7 547 547 1079 98.0 0 MTVFNKFVRSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLR LLIAVPFVLLTAADMSISLYSWCIFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFA FLSLLFFAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKEAFSPYILASR FATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVRVDNMSL YGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMA NQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQKTQQKKL IVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMY FADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENDIFSTAYNNY LINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDFVMLRKEFTEDKQGNPTPEGQ G >gi|296918697|gb|GG773003.1| GENE 100 101828 - 103171 1600 447 aa, chain - ## HITS:1 COG:argG KEGG:ns NR:ns ## COG: argG COG0137 # Protein_GI_number: 16131063 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Escherichia coli K12 # 1 447 1 447 447 910 99.0 0 MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRA MEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKE DGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACG FDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVNPIMGVKFWDESVKIPAEEVTVR FEQGHPVALNGKTFSDDVEMLLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL HIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQGRWFDSQALMLRDSLQRWVASQITGEV TLELRRGNDYSILNTVSENLTYKPERLTMEKGDSVFSPDDRIGQLTMRNLDITDTREKLF GYAKTGLLSSSATSGVPQVENLENKGQ >gi|296918697|gb|GG773003.1| GENE 101 103832 - 104254 397 140 aa, chain + ## HITS:1 COG:ECs4051 KEGG:ns NR:ns ## COG: ECs4051 COG0779 # Protein_GI_number: 15833305 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 140 13 152 152 273 100.0 5e-74 MITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPITV AYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVE GKDEVFALSNIQKANLVPHF >gi|296918697|gb|GG773003.1| GENE 102 104282 - 105769 1026 495 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 482 9 483 537 399 43 1e-110 MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVQIDRKSGDFDTFR RWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTFDRITTQTAKQVIVQKVRE AERAMVVDQFREHEGEIITGVVKKVNCDNISLDLGNNAEAVILREDMLPRENFRPGDRVR GVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKT NDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE DKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDTFT KYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIEGLDEPTVEALRERAKNALATIAQA QEESLGDNKPADDLLNLEGVDRDLAFKLAARGVCTLEDLAEQGIDDLADIEGLTDEKAGA LIMAARNICWFGDEA >gi|296918697|gb|GG773003.1| GENE 103 105794 - 108466 3211 890 aa, chain + ## HITS:1 COG:ECs4049 KEGG:ns NR:ns ## COG: ECs4049 COG0532 # Protein_GI_number: 15833303 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Escherichia coli O157:H7 # 1 890 1 890 890 1394 99.0 0 MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLIDHLNQKNSGPDKLT LQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREA EESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEA AELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSSDYHVTTSQHARQAE DESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQ KPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEE MGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGE AGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTI EAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTG IDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCG FEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGK FREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKI IGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKA AMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEG ELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA >gi|296918697|gb|GG773003.1| GENE 104 108630 - 109031 653 133 aa, chain + ## HITS:1 COG:ECs4048 KEGG:ns NR:ns ## COG: ECs4048 COG0858 # Protein_GI_number: 15833302 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 239 100.0 1e-63 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD EERRVNPDDSKED >gi|296918697|gb|GG773003.1| GENE 105 109031 - 109975 1027 314 aa, chain + ## HITS:1 COG:ECs4047 KEGG:ns NR:ns ## COG: ECs4047 COG0130 # Protein_GI_number: 15833301 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Escherichia coli O157:H7 # 1 314 1 314 314 615 100.0 1e-176 MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE GRVAPRRLVVEYPA >gi|296918697|gb|GG773003.1| GENE 106 110124 - 110393 445 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16131057|ref|NP_417634.1| 30S ribosomal subunit protein S15 [Escherichia coli str. K-12 substr. MG1655] # 1 89 1 89 89 176 100 1e-42 MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMV SQRRKLLDYLKRKDVARYTQLIERLGLRR >gi|296918697|gb|GG773003.1| GENE 107 110640 - 112775 183 711 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229537485|ref|ZP_04426621.1| ribosomal protein S1 [Planctomyces limnophilus DSM 3776] # 621 703 433 516 557 75 45 3e-12 MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSV NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNE ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAI EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR DAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT DGEKAKHAIRRIEEITAEIEVGRVYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE >gi|296918697|gb|GG773003.1| GENE 108 112884 - 113768 622 294 aa, chain + ## HITS:1 COG:ECs4044 KEGG:ns NR:ns ## COG: ECs4044 COG4785 # Protein_GI_number: 15833298 # Func_class: R General function prediction only # Function: Lipoprotein NlpI, contains TPR repeats # Organism: Escherichia coli O157:H7 # 1 294 1 294 294 561 100.0 1e-160 MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDE RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFD SVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEK QAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYL GKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ >gi|296918697|gb|GG773003.1| GENE 109 113948 - 115837 2486 629 aa, chain + ## HITS:1 COG:ECs4043 KEGG:ns NR:ns ## COG: ECs4043 COG0513 # Protein_GI_number: 15833297 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 629 18 646 646 1055 99.0 0 MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF SLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELD LETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRER RDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGE VLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGD GRRFSGERREGRAPRRDDSTGRRRFGGDA >gi|296918697|gb|GG773003.1| GENE 110 115996 - 117240 1508 414 aa, chain + ## HITS:1 COG:mtr KEGG:ns NR:ns ## COG: mtr COG0814 # Protein_GI_number: 16131053 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli K12 # 1 414 1 414 414 692 99.0 0 MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGL MILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAE MSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATL FNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPKTIVKCLVYGTLMALALY TIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLG VTLGLFDYLADLFGFDDSAMGRLKTALLTFAPPVVGGLLFPNGFLYAIGYAGLAATIWAA IVPALLARASRKRFGSPKFRVWGGKPMIMLILVFGVGNALVHILSSFNVLPVYQ >gi|296918697|gb|GG773003.1| GENE 111 117358 - 118365 1042 335 aa, chain - ## HITS:1 COG:yhbW KEGG:ns NR:ns ## COG: yhbW COG2141 # Protein_GI_number: 16131052 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 335 1 335 335 674 99.0 0 MTDKTIAFSLLDLAPIPEGSSARDAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAAT SVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRT MMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEKIPVWLLGSSLYSAQLA AQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFT SMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILR ETDADEIMVNGQIFDHQARLHSFELAMDVKEELLG >gi|296918697|gb|GG773003.1| GENE 112 118446 - 119324 965 292 aa, chain - ## HITS:1 COG:yhbV KEGG:ns NR:ns ## COG: yhbV COG0826 # Protein_GI_number: 16131051 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli K12 # 1 292 7 298 298 597 99.0 1e-171 MKYSLGPVLWYWPKETLEEFYQQAAASSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGS GKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYN AVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARC FTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGL VDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA >gi|296918697|gb|GG773003.1| GENE 113 119333 - 120328 751 331 aa, chain - ## HITS:1 COG:ECs4039 KEGG:ns NR:ns ## COG: ECs4039 COG0826 # Protein_GI_number: 15833293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 676 99.0 0 MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRK LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASA TNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSS YLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVNG ERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQ NFIPQSAWMETLGSMSEGTQTTLGAYHRKWQ >gi|296918697|gb|GG773003.1| GENE 114 120537 - 121061 701 174 aa, chain + ## HITS:1 COG:ECs4038 KEGG:ns NR:ns ## COG: ECs4038 COG3154 # Protein_GI_number: 15833292 # Func_class: I Lipid transport and metabolism # Function: Putative lipid carrier protein # Organism: Escherichia coli O157:H7 # 1 174 1 174 174 325 100.0 2e-89 MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSI HVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEG DTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMKTAPETKQTSVGEPC >gi|296918697|gb|GG773003.1| GENE 115 121055 - 121558 741 167 aa, chain + ## HITS:1 COG:ECs4037 KEGG:ns NR:ns ## COG: ECs4037 COG3153 # Protein_GI_number: 15833291 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 332 100.0 2e-91 MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFS PVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRF GFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRF >gi|296918697|gb|GG773003.1| GENE 116 121545 - 121847 238 100 aa, chain - ## HITS:1 COG:yhbQ KEGG:ns NR:ns ## COG: yhbQ COG2827 # Protein_GI_number: 16131047 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Escherichia coli K12 # 1 100 1 100 100 176 98.0 8e-45 MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLA LRAEYRVKQLTKRQKERLVAEGAVFAELLSSLQTPEIKSD >gi|296918697|gb|GG773003.1| GENE 117 121898 - 122341 411 147 aa, chain + ## HITS:1 COG:yhbP KEGG:ns NR:ns ## COG: yhbP COG3787 # Protein_GI_number: 16131046 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 147 1 147 147 286 97.0 7e-78 METLTAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFYILTEEKTRHAQMSGPQ AAIAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYNRRFPVARMLSAPVWEIRL DEIKFTDNTLGFGKKMIWLRNSGTEQA >gi|296918697|gb|GG773003.1| GENE 118 122321 - 122839 513 172 aa, chain - ## HITS:1 COG:ECs4034 KEGG:ns NR:ns ## COG: ECs4034 COG0693 # Protein_GI_number: 15833288 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli O157:H7 # 1 172 15 186 186 325 98.0 2e-89 MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVAIDKSIDE VTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVILGRK LTAVKPIVIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA >gi|296918697|gb|GG773003.1| GENE 119 122967 - 123602 605 211 aa, chain + ## HITS:1 COG:ECs4033 KEGG:ns NR:ns ## COG: ECs4033 COG0702 # Protein_GI_number: 15833287 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 211 16 226 226 421 100.0 1e-118 MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGVFNPHDPQLTDALAQVT DPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANAHSPF FYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDAR DVARVMLAEAMRPEHEGVTILSSSELRKRAE >gi|296918697|gb|GG773003.1| GENE 120 123675 - 124715 1206 346 aa, chain + ## HITS:1 COG:ECs4032 KEGG:ns NR:ns ## COG: ECs4032 COG0701 # Protein_GI_number: 15833286 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 345 1 345 346 567 98.0 1e-162 MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQPYYGKAFTAAETHSIGKSILAQADA NPWQAALNYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSL PGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPLLNPATLVFMGFVLGWDFAAIRLVAG LVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVL VLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALA LLMTLPAVSLPSLIMLRKAFPTKALWLTGAMVAVSGVIVGGLALLV >gi|296918697|gb|GG773003.1| GENE 121 124828 - 125403 631 191 aa, chain - ## HITS:1 COG:ECs4031 KEGG:ns NR:ns ## COG: ECs4031 COG2823 # Protein_GI_number: 15833285 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 296 100.0 2e-80 MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSK DEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLG EASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGV KRVTTAFTFIK >gi|296918697|gb|GG773003.1| GENE 122 125413 - 126003 475 196 aa, chain - ## HITS:1 COG:ECs4030 KEGG:ns NR:ns ## COG: ECs4030 COG0279 # Protein_GI_number: 15833284 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Escherichia coli O157:H7 # 1 195 1 195 196 368 100.0 1e-102 MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFA ASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRG NSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVN CLCDLIDNTLFPHQDV >gi|296918697|gb|GG773003.1| GENE 123 126023 - 126418 139 131 aa, chain - ## HITS:1 COG:yraN KEGG:ns NR:ns ## COG: yraN COG0792 # Protein_GI_number: 16131040 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Escherichia coli K12 # 1 131 1 131 131 248 98.0 2e-66 MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGRTT VFIEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEV EWIKDAFNDHS >gi|296918697|gb|GG773003.1| GENE 124 126376 - 128412 1835 678 aa, chain - ## HITS:1 COG:ECs4028 KEGG:ns NR:ns ## COG: ECs4028 COG3107 # Protein_GI_number: 15833282 # Func_class: R General function prediction only # Function: Putative lipoprotein # Organism: Escherichia coli O157:H7 # 1 678 1 678 678 1186 98.0 0 MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDD TRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDTQRREKTLLAAEIKLAQKDFAGAQN LLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQA LSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVVAQVAAAPA ADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQSVPVSAPATSTAAVSAPANPSAELKI YDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNIC YFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG STSELRAGVNGGSGIALTGSPITPRETTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYI VATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGN LPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVI NRKLSWLQYQQGQVVPAS >gi|296918697|gb|GG773003.1| GENE 125 128477 - 129340 975 287 aa, chain + ## HITS:1 COG:ECs4027 KEGG:ns NR:ns ## COG: ECs4027 COG0313 # Protein_GI_number: 15833281 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 531 100.0 1e-151 MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINA RLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLP GPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLE DIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEE DLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQGE >gi|296918697|gb|GG773003.1| GENE 126 129390 - 130103 583 237 aa, chain - ## HITS:1 COG:agaI KEGG:ns NR:ns ## COG: agaI COG0363 # Protein_GI_number: 16131033 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli K12 # 1 232 19 250 251 441 95.0 1e-124 MQTLQQVENYTALSERASEYLLAVIRRKPDAVICLATGATPLLTYHYLVEKIHQQQVDVS QLTFVKLDEWVDLPLTMPGTCETFLQQHIVQPLGLREDQLISFHSEEINETECERVTNLI ARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQLDARTQQHEMLKTADRPVTRGITL GLKDILNAREVLLLVTGEGKQDATERFLTAKVSTAIPASFLWLHNYFTCMIDEMCRR >gi|296918697|gb|GG773003.1| GENE 127 130184 - 130975 899 263 aa, chain - ## HITS:1 COG:ECs4019 KEGG:ns NR:ns ## COG: ECs4019 COG3716 # Protein_GI_number: 15833273 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 504 100.0 1e-143 MGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKKIYKDDKPGLSAAMKDN LEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPIAGIGDAIFWFTLLPIMAG ICSSFASQGNLLGPILFFAVYLLIFFLRVGWTHVGYSVGVKAIDKVRENSQMIARSATIL GITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFDKVFPNILPMAYTLLMYYFLRVKK AHPVLLIGVTFVLSIVCSAFGIL >gi|296918697|gb|GG773003.1| GENE 128 130965 - 131768 812 267 aa, chain - ## HITS:1 COG:agaC KEGG:ns NR:ns ## COG: agaC COG3715 # Protein_GI_number: 16131031 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli K12 # 1 267 1 267 267 475 99.0 1e-134 MHEITLLQGLSLAALVFFLGIDFWLEALFLFRPIIVCTLTGAILGDIQTGLITGGLTELA FAGLTPAGGVQPPNPIMAGLMTTVIAWSTGVDAKTAIGLGLPFSLLMQYVILFFYSAFSL FMTKADKCAKEADTAAFSRLNWATMLIVASAYAVIAFLCTYLAQGAMQALVKAMPAWLTH GFEVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVCYIQVSNLLPVAVLGAGFAVYEF FNAKSRQQAQPQPVASKNEEEDYSNGI >gi|296918697|gb|GG773003.1| GENE 129 131807 - 132283 580 158 aa, chain - ## HITS:1 COG:ECs4018 KEGG:ns NR:ns ## COG: ECs4018 COG3444 # Protein_GI_number: 15833272 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 281 100.0 4e-76 MSSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFG IRFFTIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQIS SKVYVDDQDLTDLRFIKQRGVNVFIQDVPGDQKEQIPD >gi|296918697|gb|GG773003.1| GENE 130 132450 - 133310 910 286 aa, chain - ## HITS:1 COG:ECs4017 KEGG:ns NR:ns ## COG: ECs4017 COG0191 # Protein_GI_number: 15833271 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 577 100.0 1e-165 MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALE EIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSV VDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAH GLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFA GAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRISA >gi|296918697|gb|GG773003.1| GENE 131 133323 - 134477 949 384 aa, chain - ## HITS:1 COG:agaS KEGG:ns NR:ns ## COG: agaS COG2222 # Protein_GI_number: 16131028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Escherichia coli K12 # 1 384 1 384 384 768 98.0 0 MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTG AGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESV AAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMM ASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAAR ESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDNETLVVVFVSSHPYTRQYDLDLLAELR RDNQAMRVIAIAAESNDVIAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNT PDTPSASGTVNRVVQGVIIHPWQA >gi|296918697|gb|GG773003.1| GENE 132 134826 - 135959 942 377 aa, chain - ## HITS:1 COG:ECs4015 KEGG:ns NR:ns ## COG: ECs4015 COG1820 # Protein_GI_number: 15833269 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Escherichia coli O157:H7 # 1 377 8 384 384 719 98.0 0 MTHVLRARRLLTEEGWLDDHQLRIADGVIAAIEPIPVGVTERDAELLCPAYIDTHVHGGA GVDVMDDAPDVLDKLAMHKAREGVGSWLPTTVTAPLNTIHAALERIAQRCQRGGPGAQVL GSYLEGPYFTPQNKGAHPPELFRELEIAELDQLIAVSQHTLRVVALAPEKEGALQAIRHL KQQNVRVMLGHSAATWQQTRAAFDAGADGLVHCYNGMTGLHHREPGMVGAGLTDKRAWLE LIADGHHVHPAAMSLCCCCAKERIVLITDAMQAAGMPDGHYTLCGEEVQMRGGVVRTASG GLAGSTLSVDAAVRNMVELTGVTPAEAIHMASLHPARMLGVDGVLGSLKPGKRASVVALD SGLHVQQIWIQGQLASF >gi|296918697|gb|GG773003.1| GENE 133 135956 - 136390 579 144 aa, chain - ## HITS:1 COG:ECs4014 KEGG:ns NR:ns ## COG: ECs4014 COG2893 # Protein_GI_number: 15833268 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 144 1 144 144 256 100.0 1e-68 MLSIILTGHGGFASGMEKAMKQILGEQSQFIAIDFPETSSTALLTSQLEEAIAQLDCEDG IVFLTDLLGGTPFRVASTLAMQKPGCEVITGTNLQLLLEMVLEREGLSGEEFRVQALECG HRGLTSLVDELGRCHEECPVEEGI >gi|296918697|gb|GG773003.1| GENE 134 136408 - 137286 1160 292 aa, chain - ## HITS:1 COG:ECs4013 KEGG:ns NR:ns ## COG: ECs4013 COG3716 # Protein_GI_number: 15833267 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 561 99.0 1e-160 MASNQTTLPNVSENEETLLTGVNENVYEDQSIGAELTKKDINRVAWRSMLLQASFNYERM QASGWLYGLLPALKKIHTNKRDLARAMKGHMGFFNTHPFLVTFVIGIILAMERSKQDVNS IQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGSILGAVVFIVLFNVVHLGLRF GLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGALVATYVRLSTTLEITAGDAVVK LQADVIDKLMPAFLPLVYTLTMFWLVRRGWSPLRLIAITVVLGIVGKFCHFL >gi|296918697|gb|GG773003.1| GENE 135 137276 - 138055 1013 259 aa, chain - ## HITS:1 COG:ECs4012 KEGG:ns NR:ns ## COG: ECs4012 COG3715 # Protein_GI_number: 15833266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 429 100.0 1e-120 MEISLLQAFALGIIAFIAGLDMFNGLTHMHRPVVLGPLVGLVLGDLHTGILTGGTLELVW MGLAPLAGAQPPNVIIGTIVGTAFAITTGVKPDVAVGVAVPFAVAVQMGITFLFSVMSGV MSRCDRMAENADTRGIERVNYLALLALGTFYFLCAFLPIYFGAEHAKTIIDVLPQRLIDG LGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAWLKLPVLAIAAAALAMALIDLLR KSPEPTQPAAQKEEFEDGI >gi|296918697|gb|GG773003.1| GENE 136 138066 - 138539 580 157 aa, chain - ## HITS:1 COG:ZagaV KEGG:ns NR:ns ## COG: ZagaV COG3444 # Protein_GI_number: 15803671 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 EDL933 # 1 157 13 169 169 301 98.0 4e-82 MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDLVQQNLMEMVLAEGIAVRF WTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTV SVDAGDIAAFNDLKAAGVECFVQGVPTEPAVDLFKLL >gi|296918697|gb|GG773003.1| GENE 137 138562 - 139842 1383 426 aa, chain - ## HITS:1 COG:agaZ KEGG:ns NR:ns ## COG: agaZ COG4573 # Protein_GI_number: 16131024 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Escherichia coli K12 # 1 426 1 426 426 857 99.0 0 MKHLTEMVRQHKAGKTNGIYAVCSAHPLVLEAAIRYASANQTPLLIEATSNQVDQFGGYT GMTPADFRGFVCQLADSLNFPQDALILGGDHLGPNRWQNLPAAQAMANADDLIKSYVAAG FKKIHLDCSMSCQDDPIPLTDDIVAERAARLAKVAEETCREHFGEADLEYVIGTEVPVPG GAHETLSELAVTTPDAARATLEAHRHAFEKQGLNAIWPRIIALVVQPGVEFDHTNVIDYQ PAKAAALSQMVENYETLIFEAHSTDYQTPQSLRQLVIDHFAILKVGPALTFALREALFSL AAIEEELVPAKACSGLRQVLENVMLDRPEYWQSHYHGDGNARRLARGYSYSDRVRYYWPD SQIDDAFAHLVRNLADSPIPLPLISQYLPLQYVKVRSGELQPTPRELIINHIQDILAQYH TACEGQ >gi|296918697|gb|GG773003.1| GENE 138 140091 - 140915 640 274 aa, chain + ## HITS:1 COG:ECs4009 KEGG:ns NR:ns ## COG: ECs4009 COG1349 # Protein_GI_number: 15833263 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 490 99.0 1e-138 MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGI AVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPGHRVILDSGTTTFE IARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHF DMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRI DMIIVDEGIPSDSLEGLRKAGVEVILVGDHASSL >gi|296918697|gb|GG773003.1| GENE 139 140967 - 142538 1216 523 aa, chain - ## HITS:1 COG:yhaG KEGG:ns NR:ns ## COG: yhaG COG2721 # Protein_GI_number: 16131020 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Escherichia coli K12 # 1 523 1 523 523 1055 99.0 0 MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDI PANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTF EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG VAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASI VSLQDEKHVGFQSMVEDILQVAECHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGK TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE TIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT >gi|296918697|gb|GG773003.1| GENE 140 142913 - 144253 1614 446 aa, chain + ## HITS:1 COG:ECs4005 KEGG:ns NR:ns ## COG: ECs4005 COG0477 # Protein_GI_number: 15833259 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 446 1 444 444 822 99.0 0 MMLDTVDEKKKGVHTRYLILLIIFIVTVTAVNYADRATLSIAGTEVAKELQLSAVSMGYI FSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISMFFM RFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAWGWE HVFTVMGVIGFVLTALWIKLIHNPTDHPRMSAEELKFISENGAVVDMDHKKPGSAAASGP KLHYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPALC GFAGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLLASTIILCNYTNNTTLVVMLMALAF FGKGFGALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNAALVF VGCSALMAMVCYLFVVGDIKRMELQK >gi|296918697|gb|GG773003.1| GENE 141 144269 - 145039 812 256 aa, chain + ## HITS:1 COG:ECs4004 KEGG:ns NR:ns ## COG: ECs4004 COG3836 # Protein_GI_number: 15833258 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 504 100.0 1e-143 MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIP QLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAEQAVASTRYPPEGI RGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDL AAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDL GVFRSATQKLADTFKK >gi|296918697|gb|GG773003.1| GENE 142 145069 - 145959 1182 296 aa, chain + ## HITS:1 COG:ECs4003 KEGG:ns NR:ns ## COG: ECs4003 COG2084 # Protein_GI_number: 15833257 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 296 4 299 299 511 99.0 1e-145 MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCD VIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDA PVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVA LNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIK DLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGMADHSALACYYEKLAKVEVTR >gi|296918697|gb|GG773003.1| GENE 143 146056 - 147201 1121 381 aa, chain + ## HITS:1 COG:yhaD KEGG:ns NR:ns ## COG: yhaD COG1929 # Protein_GI_number: 16131016 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Escherichia coli K12 # 1 381 28 408 408 669 99.0 0 MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSVPVADGGEGTVEAMIAATQGAE RHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAEKRDPLVTTSRGTGELILQ ALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNEIGFGGGSLNTLNDIDISGLD PRLKDCVIRVACDVTNPLVGDSGASRIFGPQKGASEAMIVELDNNLSHYADVIKKALHVD VKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTALNLEEHIHDCTLVITGEGRIDSQSI HGKVPIGVANVAKKYHKPVIGIAGSLTNDVGVVHQHGIDAVFSVLTSIGTLDEAFRGAYD NICRASRNIAATLAIGMRNAG >gi|296918697|gb|GG773003.1| GENE 144 148709 - 149647 713 312 aa, chain + ## HITS:1 COG:ECs3998 KEGG:ns NR:ns ## COG: ECs3998 COG0583 # Protein_GI_number: 15833252 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 311 1 311 312 591 100.0 1e-169 MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTG VTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFK EVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKS RTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNA DFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSY NGCRRRQLIEVD >gi|296918697|gb|GG773003.1| GENE 145 149740 - 150729 974 329 aa, chain + ## HITS:1 COG:ECs3997 KEGG:ns NR:ns ## COG: ECs3997 COG1171 # Protein_GI_number: 15833251 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 590 100.0 1e-169 MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIR GAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDY SAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVI VPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDV SRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQY IQNRKTVSIISGGNIDLSRVSQITGFVDA >gi|296918697|gb|GG773003.1| GENE 146 150751 - 152082 1496 443 aa, chain + ## HITS:1 COG:ECs3996 KEGG:ns NR:ns ## COG: ECs3996 COG0814 # Protein_GI_number: 15833250 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 443 1 443 443 794 99.0 0 MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAY PIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTIT NTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISL SLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYE KDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANH FASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSL GKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRG RLDNVFVTVIGLLTILNIVYKLF >gi|296918697|gb|GG773003.1| GENE 147 152108 - 153316 951 402 aa, chain + ## HITS:1 COG:tdcD KEGG:ns NR:ns ## COG: tdcD COG0282 # Protein_GI_number: 16131008 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Escherichia coli K12 # 1 402 5 406 406 778 98.0 0 MNEFPVVLVINCGSSSIKFSVLNASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSY EGALKAIAFELEKRNLNDNVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNY ANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHR YVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDV DFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTF VHRIARHIAGHAASLHRLDGIIFTGGIGENSSLIRRLVMEHLAVLGVEIDTEMNNRSNSF GERIVSSENARVICAVIPTNEEKMIALDAIHLGKVNAPAEFA >gi|296918697|gb|GG773003.1| GENE 148 153350 - 155644 2454 764 aa, chain + ## HITS:1 COG:ECs3994 KEGG:ns NR:ns ## COG: ECs3994 COG1882 # Protein_GI_number: 15833248 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli O157:H7 # 1 764 1 764 764 1570 98.0 0 MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGDESFLAEATPATTELWE KVMEGIRIENATHAPLDFDTNIATTITAHDAGYIDQPLEKIVGLQTDAPLKRALHPFGGI NMIRSSFHAYGREMDSEFEYIFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRG RIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDLEATIRLREELAEHRRALLQIQE MAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGV LNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFR YLHTLHTMGPAPEPNLTILWSEALPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYA IACCVSPMVIGKQMQFFGARANLAKTLLYAINGGMDEKLKIQVGPKTAPLMDDVLDYDKV MDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDS LSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYR NAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLP FTYAKDGISYTFSIVPAALGKEDPIRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREML LDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL >gi|296918697|gb|GG773003.1| GENE 149 155658 - 156047 398 129 aa, chain + ## HITS:1 COG:tdcF KEGG:ns NR:ns ## COG: tdcF COG0251 # Protein_GI_number: 16131006 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 129 22 150 150 249 100.0 1e-66 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAI VVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLE IEAIAVRSA >gi|296918697|gb|GG773003.1| GENE 150 156119 - 157471 1126 450 aa, chain + ## HITS:1 COG:Z4464 KEGG:ns NR:ns ## COG: Z4464 COG1760 # Protein_GI_number: 15803651 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli O157:H7 EDL933 # 1 448 3 450 456 891 99.0 0 MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGH ATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEML PRHENGMRITAWKGQEELLSKTYYSVGGGFIVEEEHFGLSHDVETPVPYDFHSAGELLKM CDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRA VALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYY DKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGVTELLGG SPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVS LDKVIETMYETGKDMNDKYRETSRGGLATS >gi|296918697|gb|GG773003.1| GENE 151 157771 - 159102 1409 443 aa, chain + ## HITS:1 COG:ECs3991 KEGG:ns NR:ns ## COG: ECs3991 COG0814 # Protein_GI_number: 15833245 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 443 1 443 443 786 99.0 0 MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQV GLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYF VMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKI STGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSP MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISA LAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKIPAEKI NENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYK GMSLYLIIVTGLLLCVSPFLAFS >gi|296918697|gb|GG773003.1| GENE 152 159130 - 160440 1174 436 aa, chain + ## HITS:1 COG:yhaN+M KEGG:ns NR:ns ## COG: yhaN+M COG3681 # Protein_GI_number: 16132252 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 436 1 436 436 744 98.0 0 MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLM KNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAISDAKALLAAGKVSVKI QEPCDEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTQQACVTEGEQESPLTV LSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGNWGLHIGATLEKQCARGLL AKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLAR ALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSG MICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSM QQTDRQIIEIMASKAR >gi|296918697|gb|GG773003.1| GENE 153 160572 - 160736 200 54 aa, chain - ## HITS:1 COG:no KEGG:G2583_3831 NR:ns ## KEGG: G2583_3831 # Name: yhaL # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 54 3 56 56 62 100.0 6e-09 MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA >gi|296918697|gb|GG773003.1| GENE 154 160759 - 161460 605 233 aa, chain - ## HITS:1 COG:yhaK KEGG:ns NR:ns ## COG: yhaK COG1741 # Protein_GI_number: 16131001 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Escherichia coli K12 # 1 233 1 233 233 465 98.0 1e-131 MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYP KVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKSLTRMQLWLD ACPQRENPLIQKLALNMDKQQLIASPEGGMGSLQLRQQVWLHHIVLDKGESANFQLHGPR AYLQSIHGQFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV >gi|296918697|gb|GG773003.1| GENE 155 161565 - 162461 947 298 aa, chain + ## HITS:1 COG:ECs3987 KEGG:ns NR:ns ## COG: ECs3987 COG0583 # Protein_GI_number: 15833241 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 298 1 298 298 550 99.0 1e-156 MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHR TKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLA AKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDH PIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLG VATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK >gi|296918697|gb|GG773003.1| GENE 156 162495 - 162863 352 122 aa, chain - ## HITS:1 COG:ECs3985 KEGG:ns NR:ns ## COG: ECs3985 COG3152 # Protein_GI_number: 15833239 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 120 1 120 121 222 100.0 1e-58 MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYG ILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLE QE >gi|296918697|gb|GG773003.1| GENE 157 163146 - 164132 1106 328 aa, chain - ## HITS:1 COG:yqjG KEGG:ns NR:ns ## COG: yqjG COG0435 # Protein_GI_number: 16130997 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Escherichia coli K12 # 1 328 1 328 328 654 98.0 0 MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGKGGFAAEKDRYHLYVS LACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLYQLY LHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQPKID ELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADI RLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSH KTINPTGIISIGPWQDLDEPHGRDVRFG >gi|296918697|gb|GG773003.1| GENE 158 164202 - 164684 568 160 aa, chain - ## HITS:1 COG:ECs3983 KEGG:ns NR:ns ## COG: ECs3983 COG2259 # Protein_GI_number: 15833237 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 270 98.0 6e-73 MILSIDSNDANSAPLHKKTISSLSGAVESMMKKLEDVGVLVARILMPILFITAGWGKITG YAGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNF AEGMNSLMFMKNLTISGGFLLLAITGPGAFSIDRLLNKKW >gi|296918697|gb|GG773003.1| GENE 159 164781 - 165080 379 99 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_3601 NR:ns ## KEGG: ECIAI39_3601 # Name: yqjK # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 99 1 99 99 140 100.0 2e-32 MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWNMLLSLRSWALVGSSVM AIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG >gi|296918697|gb|GG773003.1| GENE 160 165070 - 165474 350 134 aa, chain - ## HITS:1 COG:STM3230 KEGG:ns NR:ns ## COG: STM3230 COG5393 # Protein_GI_number: 16766529 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 130 1 130 132 199 90.0 2e-51 MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLF AAFGLMSLMVLVIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHEL ANDRQLLEEESREQ >gi|296918697|gb|GG773003.1| GENE 161 165477 - 165782 445 101 aa, chain - ## HITS:1 COG:ECs3980 KEGG:ns NR:ns ## COG: ECs3980 COG4575 # Protein_GI_number: 15833234 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 101 1 101 101 150 100.0 4e-37 MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDA IAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR >gi|296918697|gb|GG773003.1| GENE 162 165820 - 166203 456 127 aa, chain - ## HITS:1 COG:no KEGG:SSON_3256 NR:ns ## KEGG: SSON_3256 # Name: yqjC # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 127 1 127 127 157 98.0 2e-37 MEGSRMKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQNRIDGLNKALS EVRANCSDSQLRADHQKKIAKQKDEVAERQQDLAEAKQKGDADKIAKRERKLAEAQEELK KLKARDY >gi|296918697|gb|GG773003.1| GENE 163 166335 - 166703 247 122 aa, chain - ## HITS:1 COG:no KEGG:E2348C_3389 NR:ns ## KEGG: E2348C_3389 # Name: yqjB # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 1 122 6 127 127 226 99.0 3e-58 MSLRQLAWSGAVLLLVSTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIP FKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHR FG >gi|296918697|gb|GG773003.1| GENE 164 166722 - 167384 655 220 aa, chain - ## HITS:1 COG:STM3226 KEGG:ns NR:ns ## COG: STM3226 COG0586 # Protein_GI_number: 16766525 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 220 1 220 220 372 95.0 1e-103 MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLPAAFLPGDSLLVLVGVL IAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNWLSHLPAHYHQRAHHLFHK HGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMSGLLWVLILTTLGYMLGKTPV FLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGNRG >gi|296918697|gb|GG773003.1| GENE 165 167729 - 168520 910 263 aa, chain - ## HITS:1 COG:ECs3976 KEGG:ns NR:ns ## COG: ECs3976 COG2186 # Protein_GI_number: 15833230 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 509 99.0 1e-144 MPGAHMEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIM LEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQLIESNIAEFAATQ VTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALAAIVEKMWTQRSHNPY WKKLHEHIDARTVDNWCDDHDQILKALIRKDPHAAKLAMWQHLENTKIMLFNETSDDFEF NADRYLFAENPVVHLDTATSGSK >gi|296918697|gb|GG773003.1| GENE 166 168654 - 169952 1732 432 aa, chain - ## HITS:1 COG:ECs3975 KEGG:ns NR:ns ## COG: ECs3975 COG0477 # Protein_GI_number: 15833229 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 432 41 472 472 787 99.0 0 MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTV MQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGL KASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMAFIISGALSFIWAMA WLIFYKHPRDQKHLTDEERDYIINGQEAQHQVDTAKKMSVGQILRNRQFWGIALPRFLAE PAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLIV SRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEVA TANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVFDLLGALVIWTVLQNKPAIEV AQESHNDPAPQH >gi|296918697|gb|GG773003.1| GENE 167 170435 - 171847 1720 470 aa, chain + ## HITS:1 COG:uxaC KEGG:ns NR:ns ## COG: uxaC COG1904 # Protein_GI_number: 16130987 # Func_class: G Carbohydrate transport and metabolism # Function: Glucuronate isomerase # Organism: Escherichia coli K12 # 1 470 1 470 470 993 100.0 0 MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAEDYRFKNLYDIWLKGDHY KWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLS PSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDPIDSLEHHAEIAKDGSFTIKV LPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADLQTALTKRLDHFAAHGCKVSDHA LDVVMFAEANEAELDSILARRLAGETLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGA LRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLLSKQNEENLLPKTILYCLNPRDNEVLG TMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQLGLLSRFVGMLTDSRSFLSYT RHEYFRRILCQMIGRWVEAGEAPADINLLGEMVKNICFNNARDYFAIELN >gi|296918697|gb|GG773003.1| GENE 168 171862 - 173349 1515 495 aa, chain + ## HITS:1 COG:uxaA KEGG:ns NR:ns ## COG: uxaA COG2721 # Protein_GI_number: 16130986 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Escherichia coli K12 # 1 495 1 495 495 1015 99.0 0 MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKFALTDIAKGANVIKYGL PIGYALADIAAGEHVHAHNTRTNLSDLDQYRYQPDFQDLPAQAADREVQIYRRANGDVGV RNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLFSHTYGCSQLGDDHINTRTML QNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPERVHFMICQQQDDEIEAGIAHLHQ LYSVMRNDKREPGKLSELKFGLECGGSDGLSGITANPMLGRFSDYVIANGGTTVLTEVPE MFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIAHDQPIYENPSPGNKAGGITTLEDKSL GCTQKAGTSVVVDVLRYGERLKTPGLNLLSAPGNDAVATSALAGAGCHMVLFSTGRGTPY GGFVPTVKIATNSELAAKKKHWIDFDAGQLIHGKAMPQLLEEFIDTIVEFANGKQTCNER NDFRELAIFKSGVTL >gi|296918697|gb|GG773003.1| GENE 169 173432 - 173983 355 183 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3486 NR:ns ## KEGG: ECS88_3486 # Name: ygjV # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 183 1 183 183 350 100.0 2e-95 MTAYWLAQGVGVIAFLIGITTFFNRDERRFKKQLSVYSAVIGVHFFLLGTYPAGASAILN AIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIGTIVSTWALFRCKGLTMRC VMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFWRMQRRGIDPFKVEKTPSAVD ERG >gi|296918697|gb|GG773003.1| GENE 170 173987 - 175231 1438 414 aa, chain - ## HITS:1 COG:ECs3971 KEGG:ns NR:ns ## COG: ECs3971 COG3633 # Protein_GI_number: 15833225 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Escherichia coli O157:H7 # 1 414 1 414 414 694 98.0 0 MTTQHSPGLFRRLAHGSLVKQILAGLILGILLAWISKPAAEAVGLLGTLFVGALKAVAPI LVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVIFSFAFPSTLHLSSSAGDIS PPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLGFALRHGNETTKNLVNDMSNA VTFMVKLVIHFAPIGIFGLVSSTLATTGFSTLWGYAQLLVVLVGCMLLVALVVNPLLVWW KIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINM AGAAITITVLTLAAVNTLGIPVDLPTALLLSVVASLCACGASGVAGGALLLIPLACNMFG ISNDIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQAEDDRLANSALRN >gi|296918697|gb|GG773003.1| GENE 171 175555 - 176520 1319 321 aa, chain - ## HITS:1 COG:ECs3970 KEGG:ns NR:ns ## COG: ECs3970 COG0861 # Protein_GI_number: 15833224 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 320 1 320 321 548 99.0 1e-156 MNTVGTPLLWGGFAVVVTIMLAIDLLLQGRRGAHAMTMKQAAAWSLVWVTLSLLFNAAFW WYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVL GAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGH LRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTS NLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFIGIKMLIVDFYHIPIAVSLGVVFGI LVMTFIINAWVNYRHDKQRVE >gi|296918697|gb|GG773003.1| GENE 172 176803 - 177807 732 334 aa, chain - ## HITS:1 COG:ygjR KEGG:ns NR:ns ## COG: ygjR COG0673 # Protein_GI_number: 16130982 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 334 1 334 334 652 98.0 0 MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTS LEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQ VVLFEAFKTAYLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPTFSN GSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS VLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHL VNHPGLAVSRITAKLLTEIRRQTGVIFPADNVKL >gi|296918697|gb|GG773003.1| GENE 173 177868 - 178560 500 230 aa, chain - ## HITS:1 COG:ygjQ KEGG:ns NR:ns ## COG: ygjQ COG2949 # Protein_GI_number: 16130981 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli K12 # 1 230 1 230 230 455 95.0 1e-128 MLRAFARLLLRICFSRRTLKLGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNV GLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPA KVIFCDYAGFSTLDSVVRANKVFSENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLN MKHGLYTQLREKLARVSAVIDAKILHRQPKYLGPLVMIGPFSEHGCPAKE >gi|296918697|gb|GG773003.1| GENE 174 178637 - 179140 492 167 aa, chain - ## HITS:1 COG:ECs3967 KEGG:ns NR:ns ## COG: ECs3967 COG1451 # Protein_GI_number: 15833221 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 1 167 13 179 179 335 100.0 2e-92 MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATDKALWQYTQDLKNQFLR NAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIRVATVFRNAPEPFLRMIVV HELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQLSLGQDKI >gi|296918697|gb|GG773003.1| GENE 175 179225 - 180361 449 378 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 13 371 18 368 371 177 33 5e-43 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL LEQQLRALRKVVTPDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE PPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI ATNNKFVVLKAVKLGRRR >gi|296918697|gb|GG773003.1| GENE 176 180479 - 182497 1766 672 aa, chain - ## HITS:1 COG:ZygjL_1 KEGG:ns NR:ns ## COG: ZygjL_1 COG1902 # Protein_GI_number: 15803622 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli O157:H7 EDL933 # 1 354 1 354 354 719 98.0 0 MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGI APDLTGVGMEGGAMLNDANQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSAL QAPINRFVPHELTHEEILQLIDDFAHCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQR SDQWGGDYRNRMRFAVEVVGAVRERVGNDFIIIYRLSMLDLVEGGGTFAETVELAQAIEA AGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDIL SRGDADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRA CHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIP GKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQLKAFDETILASGIVPRIPPIDGIDHPK VLSYLDVLRDKAQVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQ AGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKI DDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARR AIAQGTRLALEI >gi|296918697|gb|GG773003.1| GENE 177 182668 - 185019 2658 783 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3477 NR:ns ## KEGG: ECS88_3477 # Name: ygjK # Def: glycosyl hydrolase # Organism: E.coli_S88 # Pathway: not_defined # 1 783 1 783 783 1595 100.0 0 MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALV QKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDGELLEKLEAKEGKPLSDKTIA GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP EQTRVAVKAIETLNGNWRSPGGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW SVMEVYNVTQDKTWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF TVKKGDKEETRSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME RYGYRDDALKLADTFFQHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF RKQ >gi|296918697|gb|GG773003.1| GENE 178 185036 - 186106 1022 356 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3476 NR:ns ## KEGG: ECS88_3476 # Name: ygjJ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 356 1 356 356 696 100.0 0 MKLITAPCRALLALPFCYAFSVTADEARPAEHDDTKTPAMTSTSSPSFRFYGELGVGGYM DLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGI NRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGYVIPNTRDIMTALKVQNLSGN FRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLAEGITWMNGLEITD GTGQLYLTGLLTPNFAARAWHHTGRADGLDVSGSESGMMVSAMYEALKGVYLSTAYTYAK HRPDHADDETTSFMQFGIWYEYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW >gi|296918697|gb|GG773003.1| GENE 179 186240 - 187673 1406 477 aa, chain - ## HITS:1 COG:ECs3960 KEGG:ns NR:ns ## COG: ECs3960 COG0531 # Protein_GI_number: 15833214 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 806 99.0 0 MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFFLATIFYFIPFCLIIAE FVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEY IMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLMLLLTLSYILLAGTALVGGVQ PADPSTVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIILAGIFI GVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAYFGLPEALMNRFVGLVSFTAMFGSL LMWTATPVKIFFSEIPEGIFGKKTVELNENGVPARAAWIQFLIVIPLMIIPMLGSNTVQD LMNTIINMTAAASMLPPLFIMLAYLNLRAKLDHLPRDFRMGSRRTGIIVVSMLIAIFAVG FVASTFPTGANILTIIFYNVGGIVIFLGFAWWKYSKYIKGLTAEERHIEATPARNVD >gi|296918697|gb|GG773003.1| GENE 180 187762 - 188211 405 149 aa, chain - ## HITS:1 COG:ebgC KEGG:ns NR:ns ## COG: ebgC COG2731 # Protein_GI_number: 16130972 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli K12 # 1 149 1 149 149 287 100.0 4e-78 MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVETDSATDALFT GHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDI HEAYRFICNNAVKKVVLKVTIEDGYFHNK >gi|296918697|gb|GG773003.1| GENE 181 188208 - 191300 3065 1030 aa, chain - ## HITS:1 COG:ECs3958 KEGG:ns NR:ns ## COG: ECs3958 COG3250 # Protein_GI_number: 15833212 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli O157:H7 # 1 1030 13 1042 1042 2166 99.0 0 MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLLLSGQWNFHFFDHPLQVP EAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLS DGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRVMQW ADSTYVEDQDMWWSAGIFRDVYLIGKQLTHINDFTVRTDFDEAYCDATLSCEVVLENLAA SPVVTTLEYTLFDGEHVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTL KDADGNVLEVVPQRVGFRDIKVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKD LQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVESHGFANVGDISRITDDPQW EKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDA EVVDIISTMYTRVPLMNEFGEYPHPKPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGH YVWEWCDHGIQAQDDNGNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIA PVKIHALDLTRGELKVENKLWFTTLDDYTLHAEVRAEGETLATQQIKLRDVAPNSEAPLQ ITLPQLDAREAFLNITVTKDSRTRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLE DDRLSCTVRGYNFAITFSKTSGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQ PNHLQIMQEHLRDFVVEQSDDEVLLVSRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSG ERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENY PFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDI TLNLDHQLLGLGSNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFF STNLHSENKQ >gi|296918697|gb|GG773003.1| GENE 182 191484 - 192467 938 327 aa, chain - ## HITS:1 COG:ECs3957 KEGG:ns NR:ns ## COG: ECs3957 COG1609 # Protein_GI_number: 15833211 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 649 98.0 0 MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEKLEYKTSSARKLQTGAV NQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLAIELTNCYEHNGLPDIKNVTGILI VGKPTSALRAAACALTDNICFIDFHEPGSGYDAVDIDLARISKEIIDFYINQGVNRIGFI GGEDLPGKADIREVAFAEYGRLKHVVREEDIWRGGFSSSSGYELAKQMLAREDYPKALFV ASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTARFTFPPLSTVRIHSEMMGSQGVNLV YEKARDGRALPLLVFVPSKLKLRGTTR >gi|296918697|gb|GG773003.1| GENE 183 192686 - 193018 474 110 aa, chain + ## HITS:1 COG:ECs3956 KEGG:ns NR:ns ## COG: ECs3956 COG0073 # Protein_GI_number: 15833210 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 194 100.0 3e-50 METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGEKTLQTVTSLVPYYSEEELMG KTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERMMPAGVRIV >gi|296918697|gb|GG773003.1| GENE 184 193060 - 194349 1366 429 aa, chain - ## HITS:1 COG:ECs3955 KEGG:ns NR:ns ## COG: ECs3955 COG4992 # Protein_GI_number: 15833209 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli O157:H7 # 1 429 68 496 496 862 100.0 0 MKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGG FGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSG TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV PFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMIL DEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHT TTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGML MAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALA AMRVSVEEA >gi|296918697|gb|GG773003.1| GENE 185 194857 - 196377 1430 506 aa, chain + ## HITS:1 COG:Zaer_2 KEGG:ns NR:ns ## COG: Zaer_2 COG0840 # Protein_GI_number: 15803613 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 EDL933 # 125 506 1 382 382 671 99.0 0 MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGYTLQELQGQPHNMVRHPD MPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATD EEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAVML WFVAAPVVTYILCALVVLLASACFEWQIVRPIENVARQALKVATGERNSVEHLNRSDELG LTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDNVQQTVATMN QMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKTMDDIADSTQRIGTITSLIND IAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASADKVQS GSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTRAVDELNLITQKNAEL VEESAQVSAMVKHRASRLEDAVTVLH >gi|296918697|gb|GG773003.1| GENE 186 196531 - 197154 785 207 aa, chain - ## HITS:1 COG:ECs3953 KEGG:ns NR:ns ## COG: ECs3953 COG1695 # Protein_GI_number: 15833207 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 351 99.0 6e-97 MSYHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN QSDITDAQIKKIIAVIDRAAFDITQLD >gi|296918697|gb|GG773003.1| GENE 187 197431 - 198195 804 254 aa, chain + ## HITS:1 COG:ECs3952 KEGG:ns NR:ns ## COG: ECs3952 COG2375 # Protein_GI_number: 15833206 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 511 98.0 1e-145 MNNSPRYPQRVRNDLRFRELTVLRAERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQ SDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQP GDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNA CQDYLAHLDGFNIEWLAHDEQAVDERLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY DPQRVRAAAYWHAK >gi|296918697|gb|GG773003.1| GENE 188 198491 - 198997 404 168 aa, chain + ## HITS:1 COG:ygjF KEGG:ns NR:ns ## COG: ygjF COG3663 # Protein_GI_number: 16130964 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Escherichia coli K12 # 1 168 1 168 168 336 100.0 1e-92 MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDRQLKPQEAQHLL DYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRG AQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELDQALVVRGR >gi|296918697|gb|GG773003.1| GENE 189 199076 - 200917 2278 613 aa, chain - ## HITS:1 COG:ECs3950 KEGG:ns NR:ns ## COG: ECs3950 COG0568 # Protein_GI_number: 15833204 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 613 1 613 613 1032 99.0 0 MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDLAPTATH VGSELSQEDLDDDEDEDEEDGDDDTADDDNSIDPELAREKFAELRAQYIVTRDTIKAKGR SHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKK NFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEEETGLTIEQVKD INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH PSRSEVLRSFLDD >gi|296918697|gb|GG773003.1| GENE 190 201112 - 202857 1384 581 aa, chain - ## HITS:1 COG:ECs3949 KEGG:ns NR:ns ## COG: ECs3949 COG0358 # Protein_GI_number: 15833203 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Escherichia coli O157:H7 # 1 581 1 581 581 1190 99.0 0 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ SLVDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLN HMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK >gi|296918697|gb|GG773003.1| GENE 191 202968 - 203183 357 71 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 [Escherichia coli O157:H7 EDL933] # 1 71 1 71 71 142 100 2e-32 MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKL ARENARRTRLY >gi|296918697|gb|GG773003.1| GENE 192 203421 - 204434 666 337 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase [Atopobium parvulum DSM 20469] # 3 327 480 813 832 261 44 3e-68 MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQ EALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPM LEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGG PLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDDQTRADIARAFE DAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMKKRRGEVFYARPEFCTD NGAMIAYAGMVRFKAGATADLGVSVRPRWPLAELPAA >gi|296918697|gb|GG773003.1| GENE 193 204477 - 205940 1476 487 aa, chain - ## HITS:1 COG:ygjE KEGG:ns NR:ns ## COG: ygjE COG0471 # Protein_GI_number: 16130959 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli K12 # 1 487 1 487 487 791 98.0 0 MKPSTEWWRYLAPLAVIAIIALLPLPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMV GISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTG LGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPPLYQSQ PNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASNATLSWGDWFLGML PLSILLVLLVPWLAYVLYPPILKSGDQVPRWAETELQAMGPLCSREKRMLGLMVGALVLW IFGGDYIDAAMVGYSVVALMLLLRIICWDDIVSNKAAWNVFFWLASLITLATGLNNTGFI SWFGKLLAGSLSGYSPTIVMVALIVVFYLLRYFFASATAYTSALAPMMIAAALAMPEIPL PVFCLMVGAAIGLGSILTPYATGPSPIYYGSGYLPTVDYWRLGAIFGLIFLVLLVITGLL WMPMVLL >gi|296918697|gb|GG773003.1| GENE 194 205988 - 206617 252 209 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 1 199 305 504 508 101 30 8e-46 SVSYPERVMKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELKRPIPYDLN GKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGKGGMGPLTEEG CQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEFGPLIVSIDTHGN NLIAENKKLFAERRDPIVEEICEHVHYIK >gi|296918697|gb|GG773003.1| GENE 195 206590 - 207498 265 302 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 24 300 21 297 508 106 27 8e-46 MSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAETSSMGKIIYHTMFDNMQ KAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVEEATVKAPLRHNAVEIFDEV NTGKNTGSGVPWVTWDIVPDGDDAEIEVYMAGGGCTLPGRSKVLMPSEGYEGVVKFVFEN ISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPIGSRHPNPKAAELELRLEEGLNRL GIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTGCWAHRRGTLRVHADLTFENLSHTRS AL >gi|296918697|gb|GG773003.1| GENE 196 207708 - 208640 829 310 aa, chain + ## HITS:1 COG:ygiP KEGG:ns NR:ns ## COG: ygiP COG0583 # Protein_GI_number: 16130956 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 310 1 310 310 637 99.0 0 MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGV ALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMR NYPELQVHFELFDRQIDLVQDNIDLDIRINDAIPDYYIAHLLTKNKRILCAAPEYLQKYP QPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKG IMLRSEWDVLPFLESGKLVRVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRL GKPDEGYQVM >gi|296918697|gb|GG773003.1| GENE 197 208653 - 209270 531 205 aa, chain - ## HITS:1 COG:ECs3942 KEGG:ns NR:ns ## COG: ECs3942 COG0344 # Protein_GI_number: 15833196 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 388 100.0 1e-108 MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLI FDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGW DLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDN IQRLWRRQETKIWTKFKRKREKDPE >gi|296918697|gb|GG773003.1| GENE 198 209375 - 209743 397 122 aa, chain + ## HITS:1 COG:folB KEGG:ns NR:ns ## COG: folB COG1539 # Protein_GI_number: 16130954 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Escherichia coli K12 # 1 122 2 123 123 222 100.0 1e-58 MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETV VSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERGNNLKE NN >gi|296918697|gb|GG773003.1| GENE 199 209834 - 210655 984 273 aa, chain + ## HITS:1 COG:ECs3940 KEGG:ns NR:ns ## COG: ECs3940 COG1968 # Protein_GI_number: 15833194 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Escherichia coli O157:H7 # 1 273 1 273 273 481 99.0 1e-136 MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDTAKTFEVVIQLGSILAV VVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPAVVLGLLFHDTIKSLFNPI NVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMIGCFQCLALWPGFSRSGATIS GGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGFLTTGDIPMFAVGFITAFVVALI AIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF >gi|296918697|gb|GG773003.1| GENE 200 210843 - 212081 1094 412 aa, chain - ## HITS:1 COG:ECs3939 KEGG:ns NR:ns ## COG: ECs3939 COG0617 # Protein_GI_number: 15833193 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Escherichia coli O157:H7 # 1 412 1 412 412 831 99.0 0 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL LRHVSPAFGEDPLRVLRVARFAARYAHLCFRIADETLALMREMTHAGELEHLTPERVWKE TENALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPARWHPEIDTGIHTLMTLSMAA MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAGWKEQRCPKPE >gi|296918697|gb|GG773003.1| GENE 201 212145 - 212765 723 206 aa, chain - ## HITS:1 COG:ECs3938 KEGG:ns NR:ns ## COG: ECs3938 COG3103 # Protein_GI_number: 15833192 # Func_class: T Signal transduction mechanisms # Function: SH3 domain protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 348 100.0 4e-96 MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTVNAGEEVTLLQ TDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRT AEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASVQLDDKQRTIIMQWFMYGGGV LGLGLLLGLVLPHLIPSRKRKDRWMN >gi|296918697|gb|GG773003.1| GENE 202 212784 - 212990 73 68 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_3537 NR:ns ## KEGG: ECUMN_3537 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 68 1 68 68 119 100.0 5e-26 MESGTIVVASVSLRKAFDINRNPLCQVLPLLQTFTPVKLPVAWQFGAKYYLLTKKIALSS PFIVTYVT >gi|296918697|gb|GG773003.1| GENE 203 213007 - 214308 1496 433 aa, chain + ## HITS:1 COG:ygiF KEGG:ns NR:ns ## COG: ygiF COG3025 # Protein_GI_number: 16130950 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 433 1 433 433 825 97.0 0 MAQEIELKFIVNHSAVEALRDHLNTLDGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGE NGRYEMTMKVAGRVTGGLHQRPEYNVALSAPTLDLAQLPTEVWPNGELPADLASRVQPLF STDFYREKWLVEVDGSQIEIALDQGEVKAGEFAEPICELELELLSGDMRAVLKLANQLVS QTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHE ELWVRGNDAAKEQVLAAIGLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTA VYSTETAMAKLALTEWLVSKAWQPFLDAKAQSKMSDSFKRFADIHLSRHAAELKSVFCQP LGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQDWLENWQGLRHAIATGQRIEIEHFRNEA NNQEPFWLHSGKR >gi|296918697|gb|GG773003.1| GENE 204 214331 - 217171 2922 946 aa, chain + ## HITS:1 COG:glnE KEGG:ns NR:ns ## COG: glnE COG1391 # Protein_GI_number: 16130949 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Escherichia coli K12 # 1 946 1 946 946 1800 98.0 0 MKPLSSPLQQYWQTVVERLPEPLAEESLSAQAKSVLTFSDFVQDSVIAHPEWLTELESQP PQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVRIAWAQTLALVTEESILQQLS HLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGMGKLGGGELNFSSDIDLIFAW PEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGFVYRVDMRLRPFGESGPLVLSFA ALEDYYQEQGRDWERYAMVKARIMGDSDGVYANELRAMLRPFVFRRYIDFSVIQSLRNMK GMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQLIRGGREPSLQSRALLPTLSAIAALH LLSENDAEQLRVAYLFLRRLENLLQSINDEQTQTLPSDELTRARLAWAMDFADWPQLTGV LTAHMANVRRVFNELIGDDESETQEESLSEQWRELWQDALQEDDTTPVLAHLSEDERKQV LMLIADFRKELDKRTIGPRGRQVLDHLMPHLLSDVCAREDAAVTLSRITALLVGIVTRTT YLELLSEFPAALKHLISLCAASPMIASQLARYPLLLDELLDPNTLYQPTATDAYRDELRQ YLLRVPEDDEEQQLEALRQFKQAQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQ AWVQMVARYGKPNHLNEREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGER EIDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAW TWEHQALVRARVVYGDPQLTAHFDAVRREIMTLPREGKTLQTEVREMREKMRAHLGNKHR DRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMAL TRAYTTLRDELHHLALQELPGHVSEDCFTAERELVRASWQKWLVEE >gi|296918697|gb|GG773003.1| GENE 205 217219 - 218652 1783 477 aa, chain + ## HITS:1 COG:rfaE KEGG:ns NR:ns ## COG: rfaE COG2870 # Protein_GI_number: 16130948 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Escherichia coli K12 # 1 477 1 477 477 913 99.0 0 MKVTLPEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVNTIEERPGGAANVAMNI ASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLD FEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASVQQMIQLARKAGVPVLIDPKG TDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMKLIADYELSALLVTRSEQGMSLL QPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNSLEEACFFANAAAGVVVGKLGT STVSPIELENAVRGRADTGFGVMTEEELKLAVAAARKRGEKVVMTNGVFDILHAGHVSYL ANARKLGDRLIVAVNSDASTKRLKGDSRPVNPLEQRMIVLGALEAVDWVVSFEEDTPQRL IAGILPDLLVKGGDYKPEEIAGSKEVWANGGEVLVLNFEDGCSTTNIIKKIQLDKKG >gi|296918697|gb|GG773003.1| GENE 206 219071 - 220732 1798 553 aa, chain - ## HITS:1 COG:yqiK KEGG:ns NR:ns ## COG: yqiK COG2268 # Protein_GI_number: 16130947 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 553 1 553 553 807 98.0 0 MDDIVNSVPSWMFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLSGQKVVMSGGAIV MPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIATAAQTLG QRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAEDLSKNGLELE SVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALS RKLEIEQQEAFMTLEQEQQVKTRTAEQNAKIAAFEAERRREAEQTRILAERQIQETEIDR EQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANLALAEAVS AQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAEKEAAEMQAAAIVELAEA TRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPAVIEKSVEPMKAIDGIKIIQ VDGLNRGGATGDANTGNVGGGNLAEQALSAALSYRTQAPLIDSLLNEIGVSGGSLAALTS SLSSTTPVEEKAE >gi|296918697|gb|GG773003.1| GENE 207 220759 - 221388 143 209 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3447 NR:ns ## KEGG: ECS88_3447 # Name: yqiJ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 209 1 209 209 412 100.0 1e-114 MILFADYNTPYLFAISFVLLIGLLEIFALICGHMLSGALDAHLDHYDSITTGHISQALHY LNIGRLPALVVLCLLAGFFGLIGILLQHACVTLWQSPLPNLFVVPVSLLFTIIAVHYTGK VVAPWIPRDHSSAITEEEYVGSMALITGHQATSGNPCEGKLTDQFGQIHYLLLEPEEGKT FTKGDKVLIICRLSATRYLAENNPWPQIL >gi|296918697|gb|GG773003.1| GENE 208 221658 - 221858 173 66 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_3531 NR:ns ## KEGG: ECUMN_3531 # Name: glgS # Def: glycogen synthesis protein GlgS # Organism: E.coli_UMN026 # Pathway: not_defined # 1 66 1 66 66 127 100.0 1e-28 MDHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTWFCARYAWYCQQMMQTR ELELEH >gi|296918697|gb|GG773003.1| GENE 209 221893 - 222192 362 99 aa, chain - ## HITS:1 COG:ECs3930 KEGG:ns NR:ns ## COG: ECs3930 COG2960 # Protein_GI_number: 15833184 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 99 21 119 119 145 94.0 1e-35 MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRQTLQAQLTRLDLVSREEFDVQTQVLL RTREKLALLEQRISELEARNNPIAELQSPPAIPPVDKAE >gi|296918697|gb|GG773003.1| GENE 210 222566 - 223219 827 217 aa, chain + ## HITS:1 COG:ECs3929 KEGG:ns NR:ns ## COG: ECs3929 COG0108 # Protein_GI_number: 15833183 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 217 1 217 217 412 99.0 1e-115 MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIR HGSGIVCLCITDDRRKQLDLPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRA AIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDG TMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS >gi|296918697|gb|GG773003.1| GENE 211 223273 - 224040 312 255 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3443 NR:ns ## KEGG: ECS88_3443 # Name: yqiI # Def: fimbrial adhesin # Organism: E.coli_S88 # Pathway: not_defined # 1 255 95 349 349 488 100.0 1e-136 MLNNPYLTFGVTYNGVDYEGINERIDTHACLDKYEQYYNGYYYDPVCNGSTLQKNVTFNA HFRVYVKFKSRPAGDQTVNFGIVNVLQFDGEGGANMSSNAKNLRYVITGLDNISFLDCSV DVRIFPESQIVNFGQIAANSIATYRPKAAFSVSTIKDVAADCTEQFDVATSFYTTDTLHD DTHLEMGNGLLMRITDQKTQEDIKFNQYKRFTTYIPGQTGAMVTRDYQAELSQKPGETLV YGPFKKDLIVKINYN >gi|296918697|gb|GG773003.1| GENE 212 224319 - 225059 576 246 aa, chain - ## HITS:1 COG:yqiH KEGG:ns NR:ns ## COG: yqiH COG3121 # Protein_GI_number: 16130943 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 6 243 12 250 252 255 49.0 7e-68 MKSPLITTGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQSWIE DASGKKTRDYISTLPPMERIEPDEQIQIRLMALASLNDLPQDRETLFYYNVREIPPRAKE QNVMQIAMQSRLKLFWRPKAIELKEGEMIPLQKVTITRTAAGLTLNNPTPYHITVGYIGT NGKTLMPGADSIMVVPFTSATQHLSSLPSTFQLGFVADYGGLEMFKVECNSIQSLCQSSP AKKGKI >gi|296918697|gb|GG773003.1| GENE 213 225075 - 227369 1533 764 aa, chain - ## HITS:1 COG:yqiG KEGG:ns NR:ns ## COG: yqiG COG3188 # Protein_GI_number: 16130942 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 3 760 64 817 821 861 56.0 0 MLPQTLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNIAGSECLDLSQRQELTT RLDKATMILSLSVPQAWLKYQATNWTPPEFWDTGIAGFILDYNVYASQYAPHHGDSTQNV SSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFRPIPSWSSKFTMGQYDL SSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVTVAQNGRVLYQTTVAPG PFTISDLGQSFQGLLDVTVEEEDGRTSTFQVGSASIPYLTRKGQVRYKTSLGKPTSVGHN DINNPFFWTAEASWGWLNNVSLYGGGMFTADDYQAITTGIGFNLNQFGSLSFDVTGADAS LQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSMSEYLSSRNGDESIDNE KESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKNFDIGDFKGISASLAVS RIRWDDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISWYDSSDRNNIWNISASA TDDNIRDGEPTLRGSYQHYSPWGRLNINGSVQPNQYNSVTAGWYGSLTATRHGIALHDYS YGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSMLRVNNNDLPEGVDVEN SVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVTDKATGKDVGLVAEDGF VYLSGIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK >gi|296918697|gb|GG773003.1| GENE 214 227684 - 228247 605 187 aa, chain - ## HITS:1 COG:ygiL KEGG:ns NR:ns ## COG: ygiL COG3539 # Protein_GI_number: 16130939 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 2 187 4 183 183 189 59.0 2e-48 MLKKTLLSMFATALLSGVAFNALADDANQGSGKITFKGEVIDAPCSIAPGDEDQTINLGE VADTVLKSGQKSLPVDVTIHLQDCILSDGTNTVDKVKITFSSASVDATDSNLLKNTLEGN IGGATDVGVRLVKSDNTNVTLGTPITINFPTTNSYQELNFKARMESLGRTATPGNVQAQA NYVLDYK >gi|296918697|gb|GG773003.1| GENE 215 228818 - 228988 212 56 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3438 NR:ns ## KEGG: ECS88_3438 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 56 6 61 61 99 100.0 4e-20 MFIAWYWIVLIVLLAGGYFLHLKRYCKAFRHDRDALLAARSKLDKRSDKEVFEKHQ >gi|296918697|gb|GG773003.1| GENE 216 229050 - 229823 895 257 aa, chain - ## HITS:1 COG:ECs3928 KEGG:ns NR:ns ## COG: ECs3928 COG0428 # Protein_GI_number: 15833182 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Escherichia coli O157:H7 # 1 257 1 257 257 392 100.0 1e-109 MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAE GMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLPKSIKRTAILLTLGISLHN FPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAILWAGISGLA EILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCG MSVMGFSLVLLQTAGIG >gi|296918697|gb|GG773003.1| GENE 217 229966 - 230754 888 262 aa, chain + ## HITS:1 COG:ECs3927 KEGG:ns NR:ns ## COG: ECs3927 COG3384 # Protein_GI_number: 15833181 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 262 10 271 271 505 98.0 1e-143 MSSTRMPALFLGHGSPMNVLEDNLYTRSWQTLGMTLPRPKAIVVVSAHWFTRGTGVTAME TPPTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLAPVPVALDKEAWGFDHGSWGVLIK MYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSS PYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGALSNPTPEHYLPLLYVLGAWDGQE PITIPVDGIEMGSLSMLSVQIG >gi|296918697|gb|GG773003.1| GENE 218 230833 - 231504 456 223 aa, chain - ## HITS:1 COG:STM3194 KEGG:ns NR:ns ## COG: STM3194 COG1495 # Protein_GI_number: 16766494 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Salmonella typhimurium LT2 # 3 223 4 224 225 408 87.0 1e-114 MGIKGMWKDLRTSPVDTLVRWQEQRLLWLLMAVAMGALIILAHSFFQIYLYMAPCEQCVY IRYAMFVMVIGGLVAAINPKNIILKLIGCVMAFYGSILGLKFSLKLNDIHHAVHNPDPDS LFGVQGCSTDPTFPFNLPLAQWAPNWFKPTGDCGYDAPIVPDGVTLSSTQQWFVEMYQQS EGWYLLPPWHFMNMAQACMLAFGMCLVLLVIMSGAWALKIIRG >gi|296918697|gb|GG773003.1| GENE 219 231519 - 232187 825 222 aa, chain - ## HITS:1 COG:STM3193 KEGG:ns NR:ns ## COG: STM3193 COG0526 # Protein_GI_number: 16766493 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 1 222 1 222 223 356 88.0 2e-98 MSKLGISSLFKTILLTAALAVSFTASAFTEGTDYMVLEKPIPNADKTLIKVFSYACPFCY KYDKAVTGPVSEKVKDIVAFTPFHLETKGEYGKQASEVFAVLINKDKAAGISLFDANSQF KKAKFAYYAAYHDKKERWSDGKDPAAFIKTGLDAAGMSQADFEAALKEPAVQETLKKWKA SYDVAKIQGVPAYVVNGKYLIYTKSIKSIDAMADLIRELASK >gi|296918697|gb|GG773003.1| GENE 220 232205 - 234001 1861 598 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3432 NR:ns ## KEGG: ECS88_3432 # Name: assT # Def: arylsulfate sulfotransferase (EC:2.8.2.22) # Organism: E.coli_S88 # Pathway: not_defined # 1 598 1 598 598 1231 100.0 0 MFDKYRKTLVAGTVAITLGLSASGVMAAGFKPAPPAGQLGAVIVDPYGNAPLTALVDLDS HVISDVKVTVHGKGEKGVEISYPVGQESLKTYDGVPIFGLYQKFANKVTVEWKENGKVMK DDYVVHTSAIVNNYMDNRSISDLQQTKVIKVAPGFEDRLYLVNTHTFTAQGSDLHWHGEK DKNAGILDAGPATGALPFDIAPFTFIVDTEGEYRWWLDQDTFYDGRDRDINKRGYLMGIR ETPRGTFTAVQGQHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKSNYRR DDGVHVTTIRDHILEVDKSGRVVDVWDLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQ AKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQGVVKIGRDKQVKWILAP SKGWEKPLASKLLKPVDANGKPITCNENGLCENSDFDFTYTQHTAWISSKGTLTIFDNGD GRHLEQPALPTMKYSRFVEYKIDEKKGTVQQVWEYGKERGYDFYSPITSIIEYQADRNTM FGFGGSIHLFDVGQPTVGKLNEIDYKTKEVKVEIDVLSDKPNQTHYRALLVRPQQMFK >gi|296918697|gb|GG773003.1| GENE 221 234486 - 235646 1168 386 aa, chain - ## HITS:1 COG:ECs3926 KEGG:ns NR:ns ## COG: ECs3926 COG0754 # Protein_GI_number: 15833180 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Escherichia coli O157:H7 # 1 386 1 386 386 790 99.0 0 MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCL KVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADT PTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCR DTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFML REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYV VKPIFSREGANVSIIENGKTIAAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQP AGIGIREDRALITQDMSRFYPHIFVE >gi|296918697|gb|GG773003.1| GENE 222 235652 - 236323 467 223 aa, chain - ## HITS:1 COG:ygiB KEGG:ns NR:ns ## COG: ygiB COG5463 # Protein_GI_number: 16130933 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 223 12 234 234 360 100.0 1e-99 MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLAGCEKSDETVSLYQNADDCSAANPGK SAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGS FWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDATGKNYGAAQPGRTMTVP KTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSSRSMGG >gi|296918697|gb|GG773003.1| GENE 223 236471 - 237952 1617 493 aa, chain - ## HITS:1 COG:tolC KEGG:ns NR:ns ## COG: tolC COG1538 # Protein_GI_number: 16130931 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli K12 # 1 493 3 495 495 800 99.0 0 MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPL LPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTY QTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR AQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNTLLKEAEK RNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSN MGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASI SSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQL NIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPVVQQTSA RTTTSNGHNPFRN >gi|296918697|gb|GG773003.1| GENE 224 238157 - 238786 597 209 aa, chain + ## HITS:1 COG:ECs3922 KEGG:ns NR:ns ## COG: ECs3922 COG0494 # Protein_GI_number: 15833176 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 405 100.0 1e-113 MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAA VLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI VKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWV EEGKIDNAASVIALQWLQLHHQALKNEWA >gi|296918697|gb|GG773003.1| GENE 225 238787 - 239209 181 140 aa, chain + ## HITS:1 COG:ECs3921 KEGG:ns NR:ns ## COG: ECs3921 COG3151 # Protein_GI_number: 15833175 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 140 1 140 140 274 100.0 4e-74 MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVT IEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ FLADWLRYCLAHGAMAIPVY >gi|296918697|gb|GG773003.1| GENE 226 239234 - 240061 741 275 aa, chain + ## HITS:1 COG:ECs3920 KEGG:ns NR:ns ## COG: ECs3920 COG1409 # Protein_GI_number: 15833174 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Escherichia coli O157:H7 # 1 275 1 275 275 526 99.0 1e-149 MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQAVLEAIRPHQHEFDLIV ATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMYSALQDAGISPAKRVFIGE QWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTLLLLHHHPLPAGCSWLDQHSL RNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLLATPSTCVQFKPHCSNFTLDTIA PGWRTLELHADGTLTTEVHRLADARFQPDTASEGY >gi|296918697|gb|GG773003.1| GENE 227 240061 - 240642 469 193 aa, chain + ## HITS:1 COG:ECs3919 KEGG:ns NR:ns ## COG: ECs3919 COG3150 # Protein_GI_number: 15833173 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 390 100.0 1e-109 MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYPSDAAELLESIVLEHGG DSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESR HIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYASCRQTVIEGGNHAFTGFEDY FNPIVDFLGLHHL >gi|296918697|gb|GG773003.1| GENE 228 240671 - 242563 1970 630 aa, chain + ## HITS:1 COG:parE KEGG:ns NR:ns ## COG: parE COG0187 # Protein_GI_number: 16130926 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Escherichia coli K12 # 1 630 1 630 630 1300 99.0 0 MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHAKRVDVILH ADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVN ALSKRVEVNVRRDGQIYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFS VSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDGLNDYLAEAVNGLPTLPEKPFIG NFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNI LPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFILWLNQ NVQAAELLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTAQDLNRTELFLVEGD SAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQL RYGKICILADADSDGLHIATLLCALFVKHFRALVKHGHVYVALPPLYRIDLGKEVYYALT EEEKEGVLEQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTD AMMDMLLAKKRSEDRRNWLQEKGDMAEIEV >gi|296918697|gb|GG773003.1| GENE 229 242627 - 244768 1080 713 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145633184|ref|ZP_01788915.1| putative hydroxamate-type ferrisiderophore receptor [Haemophilus influenzae 3655] # 17 713 9 737 737 420 37 1e-116 MAMFTPSFSGLKGRALFSLLFAAPMIHATDSVTTKDGETITVTADANTATEATDGYQPLS TSTATLTDMPMLDIPQVVNTVSDQVLENQNATTLDEALYNVSNVVQTNTLGGTQDAFVRR GFGANRDGSIMTNGLRTVLPRSFNAATERVEVLKGPASTLYGILDPGGLINVVTKRPEKT FHGSVSATSSSFGGGTGQLDITGPIEGTQLAYRLTGEVQDEDYWRNFGKERSTFIAPSLT WFGDNATVTMLYSHRDYKTPFDRGTIFDLTTKQPVNVDRKIRFDEPFNITDGQSDLAQLN AEYHLNSQWTARFDYSYSQDKYSDNQARVTAYDATTGTLTRRVDATQGSTQRMHATRADL QGNVDIAGFYNEILGGVSYEYYDLLRTDMIRCKKAKDFNIYNPVYGNTSKCTTVSASDSD QTIKQENYSAYAQDALYLTDNWIAVAGIRYQYYTQYAGKGRPFNVNTDSRDEQWTPKLGL VYKLTPSVSLFANYSQTFMPQSSIASYIGDLPPESSNAYEVGAKFELFDGITADIALFDI HKRNVLYTESIGDETIAKTAGRVRSRGVEVDLAGALTENINIIASYGYTDAKVLEDPDYA GKPLPNVPRHTGSLFLTYDIHNMPGNNTLTFGGGGHGVSRRSATNGADYYLPGYFVADAF AAYKMKLQYPVTLQLNVKNLFDKTYYTSSIATNNLGNQIGDPREVQFTVKMEF >gi|296918697|gb|GG773003.1| GENE 230 245142 - 245951 475 269 aa, chain + ## HITS:1 COG:ECs3916 KEGG:ns NR:ns ## COG: ECs3916 COG1120 # Protein_GI_number: 15833170 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 548 98.0 1e-156 MAHNAKGQGLILDNVSAGYHKKIIVDGVSFSVPTEKMTVLVGANGCGKSTLLSTIARILQ PMGGSILLDGKAIHEQPTKALSRRLGILPQSPLLPEGLTVYELVSRGRFPWQNFIRQWSD ADELAVEEALKLTGTQEFAHLPVEKLSGGQRQRCWIAMVLAQKTPYILLDEPTTWLDLRY QVEILELLHDLTRHHGRTVVVVLHDLNFAVNYGDTLIFLRQGKVVRVLNEGEHCTPELVK AVFDVDVHASINPLTGKPYFMPFRGVEKV >gi|296918697|gb|GG773003.1| GENE 231 245948 - 246931 536 327 aa, chain + ## HITS:1 COG:ECs3915 KEGG:ns NR:ns ## COG: ECs3915 COG0609 # Protein_GI_number: 15833169 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 456 99.0 1e-128 MMRTGLVTVIFLALLLVGCVVYPGIGARFIAPQTVLQAFLHFDPQNFDHNVIVRLRLPRL AAALLTGASLGVAGALLQAVIRNPLGEPHILGLNAGAALAVVAASALGLAFPVGRPLLAS TGGALLFLLILLLSSAGRSGLTPMKVTLCGVALSAFVSSITAAILILDEQTLLAMRTWLA GDLAGQDWATLGTSAWFSLGGFVLALYLAPSLNMLALGDRMAQGLGVSVLRTRTFTLLAI ALLCGAAVSIAGPIGFVGLLVPQIVRRLVSADLRVLLPLSACVGALLLLLADIIARTLFT PHELATGVMTALVGAPVFVIMATRMFK >gi|296918697|gb|GG773003.1| GENE 232 246940 - 247977 494 345 aa, chain + ## HITS:1 COG:ECs3914 KEGG:ns NR:ns ## COG: ECs3914 COG0609 # Protein_GI_number: 15833168 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 1 345 5 349 349 553 98.0 1e-157 MNVGLRPLRVGKFSTLVRPKNLLLLGGLFLLAVGILIFGLMQGSFSVPASEVGRALFAPE NVSTDARYIVQDIRLPRVIMALLCGAMLGMAGAAMQSIARNGLADPGLIGVKEGCSVAVL WLIFQFPMLGMFWRPVAGLAGGLLVALIVIFCARDISRPRFVLIGIGVSWFFAAGIGVFM TTADVRDVQTALMWLSGSLHAANWMLVGISACWMLPAALLLLFTARTADIALLGHQVATG LGVNSSRLALLRVAAPIILTAVCVSCVGNIGFVGLIAPHISRFILRGGQTTLLLGSAVSG ALLVILADSIGRLAFLPLQLPAGIIISLIGGPFFLLLLWQRRNSF >gi|296918697|gb|GG773003.1| GENE 233 247988 - 248935 598 315 aa, chain + ## HITS:1 COG:ECs3913 KEGG:ns NR:ns ## COG: ECs3913 COG0614 # Protein_GI_number: 15833167 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 15 315 15 315 315 588 99.0 1e-168 MRLFFSLLILLSFFSRATEPVQVFTDDLGRKVTVPAHPKRIVSLHDLDITIPLIELGVPP VASHGRTRPDGSHFIRSGALLTGVDFDNSSIAFIGTADIDIEAIVAAKPDLIITEPTRNT PIEQLEKIAPTVSIDHLKGGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATLDSQK ITVSVIQANQGKINVMHSYHSLGRVLRDAGFRFPPLIESIPEGGRMDVSAERLPELDADF VFATWRGDTGGKPQDELAAMEKVMPGWCQFLTACRSGRYVLISREEAISNSFASLGLMAA QIQSQIAGRPLPEAK >gi|296918697|gb|GG773003.1| GENE 234 248932 - 249819 499 295 aa, chain + ## HITS:1 COG:ECs3912 KEGG:ns NR:ns ## COG: ECs3912 COG1737 # Protein_GI_number: 15833166 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 549 98.0 1e-156 MIQKDKARVDIFGERFRTRASQLTPGLRAVASYINEHREVVLEQTAMEIAATLNTSDATV IRAIQALGFAGLRDLKRTLEQWLGPALSSSEKMSTTVSNLTSDVNTAIDFVLEGHLYTCN VLSEPENRHALAQAVALLVQARQVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGL AEQLIALQRGDVLIMMAQKSAHREGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHV PRGDEKGKTPLHGTVLLCLEMIVWSVASAVPQRAVKTIKRINDFHRGLKTGRKNG >gi|296918697|gb|GG773003.1| GENE 235 249864 - 250178 413 104 aa, chain - ## HITS:1 COG:ECs3911 KEGG:ns NR:ns ## COG: ECs3911 COG1359 # Protein_GI_number: 15833165 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 104 1 104 104 197 98.0 3e-51 MITVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSI VMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQPGL >gi|296918697|gb|GG773003.1| GENE 236 250209 - 250790 664 193 aa, chain - ## HITS:1 COG:ECs3910 KEGG:ns NR:ns ## COG: ECs3910 COG2249 # Protein_GI_number: 15833164 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 400 100.0 1e-112 MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA DVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYM LSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPRY TEEYRKHLVEIFG >gi|296918697|gb|GG773003.1| GENE 237 251040 - 251519 17 159 aa, chain + ## HITS:1 COG:YPO2962 KEGG:ns NR:ns ## COG: YPO2962 COG3157 # Protein_GI_number: 16123144 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 159 3 161 161 199 59.0 1e-51 MSNMIYLSIKGKIQGLISEGCGSYASIGNKYQINHVDEIFVLQFDHSLSREYNVVHHPIK FYKPIDKSSPLLNAALSENEELSAVFNFYRINSGGCIERFYTIELQGAHLSNILTCYPHS ITHAGNQPEDVIVLNYKNITWKHHIASTESYSCWEERIF >gi|296918697|gb|GG773003.1| GENE 238 251522 - 252232 260 236 aa, chain + ## HITS:1 COG:no KEGG:APECO1_3393 NR:ns ## KEGG: APECO1_3393 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 236 1 236 236 481 100.0 1e-134 MKSDLTIKNRYCTIPQAKFRKWDEMDVLLWKLGKNDSRRRSGVYYLNAYKDAYVQYNRDK IIKHAYAAGIRPELLGGVAWIESGGMPENYKFQIYETKRMIGLLDMPENKTSFGSMGIQI RTAAITLGLDPSELTTRNQLELATCLMEDDFTFQIAATYLRDLVLFDYPSSATLYMTNEQ YIMAGIRYNRGVERDLGFFICLINNLPARDTDDYKFISYGMRLLEIREHIKKLINE >gi|296918697|gb|GG773003.1| GENE 239 252617 - 253966 1159 449 aa, chain - ## HITS:1 COG:ygiY KEGG:ns NR:ns ## COG: ygiY COG0642 # Protein_GI_number: 16130922 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 449 1 449 449 845 98.0 0 MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLMLFAKRLSTLDL NEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDGDNGEDIPYSYQREGFADG QLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPIMLIIMMV LLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRF TSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLD SLDNLQDVAEIPLEDLLQSSVMDIYHTAQQANIDVRLTLNANGIKRTGQPLLLSLLVRNL LDNAVRYSPQGSVVDVTLNADNFIVRDNGPGVTPEALARIGERFYRPPGQTATGSGLGLS IVQRIAKLHDMNVEFGNAEQGGFEAKVSW >gi|296918697|gb|GG773003.1| GENE 240 253963 - 254622 790 219 aa, chain - ## HITS:1 COG:ECs3907 KEGG:ns NR:ns ## COG: ECs3907 COG0745 # Protein_GI_number: 15833161 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 421 99.0 1e-118 MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGR DILREWREKGQREPVLILTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALMRRTN GQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLELLMRNAGRVLPRKLIEEKLYT WDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGEK >gi|296918697|gb|GG773003.1| GENE 241 254774 - 255166 502 130 aa, chain + ## HITS:1 COG:ECs3906 KEGG:ns NR:ns ## COG: ECs3906 COG3111 # Protein_GI_number: 15833160 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 130 1 130 130 243 100.0 5e-65 MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNGSVTTVESAKSLRDDTW VTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPKDTVEIQGEVDKDWNSVEI DVKQIRKVNP >gi|296918697|gb|GG773003.1| GENE 242 255219 - 255701 349 160 aa, chain + ## HITS:1 COG:ECs3905 KEGG:ns NR:ns ## COG: ECs3905 COG3449 # Protein_GI_number: 15833159 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 328 96.0 3e-90 MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWD DPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIR HWLPASGEKMRKAPILFHYTNLAEGMTERRLETDIYVPLA >gi|296918697|gb|GG773003.1| GENE 243 255810 - 257381 1462 523 aa, chain + ## HITS:1 COG:ygiS KEGG:ns NR:ns ## COG: ygiS COG4166 # Protein_GI_number: 16130916 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 521 1 521 535 1024 99.0 0 MYTRNLLWLVSLVSAAPLYAADVPANTPLAPQQVFRYNNHSDPGTLDPQKVEENTAAQIV LDLFEGLVWMDGEGQVQPAQAERWEILDDGKRYIFHLRSGLQWSDGQPLTAEDFVLGWQR AVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKATDDRTLEVTLEQPVPWFTTML AWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDKWVVNEKITARKNPKYRDAQHTVLQ QVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIEKSQPGELRIIPRLNSEYYNFNLEK PPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATTLTPPEVKGFSATTFDELQKPMSERVA MAKVLLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSEWKKWLGAQVTLRTMEWKTYLD ARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHWKNAQYDALLNQATQITDATKR NALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGFPLHNPPS >gi|296918697|gb|GG773003.1| GENE 244 257536 - 259794 2559 752 aa, chain + ## HITS:1 COG:ECs3903 KEGG:ns NR:ns ## COG: ECs3903 COG0188 # Protein_GI_number: 15833157 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Escherichia coli O157:H7 # 1 752 1 752 752 1459 99.0 0 MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKF KKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRY TESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDI PPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVR MRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIV PRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRR RLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILEL KLRHLAKLEEMKIRGEQSELEKERDQLQGILASERKMNNLLKKELQADAQAYGDERRSPL QEREEAKAMSEHDMLPSEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSN QPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDA GYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDL PQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVAGE RGRRGTLMRGLQRIDRVEIDSPRRASSGDSEE >gi|296918697|gb|GG773003.1| GENE 245 260029 - 260766 558 245 aa, chain + ## HITS:1 COG:ECs3902 KEGG:ns NR:ns ## COG: ECs3902 COG0204 # Protein_GI_number: 15833156 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 515 100.0 1e-146 MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPAD AESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNN RTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVS TTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAERE AAGKV >gi|296918697|gb|GG773003.1| GENE 246 260841 - 262253 1184 470 aa, chain + ## HITS:1 COG:ECs3901 KEGG:ns NR:ns ## COG: ECs3901 COG2132 # Protein_GI_number: 15833155 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Escherichia coli O157:H7 # 1 470 1 470 470 930 100.0 0 MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRRGQPLFMTVQRAHWSFT PGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARMM SPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVD DFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQSPYVEVSRGWVRLRLLNASNSR RYQLQMSDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAAS IVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDISLGD DPGINGQLWDVNRIDVTAQQGTWERWTVRADEPQAFHIEGVMFQIRNVNGAMPFPEDRGW KDTVWVDGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP >gi|296918697|gb|GG773003.1| GENE 247 262324 - 263628 1207 434 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 [Algoriphagus sp. PR1] # 6 432 3 429 431 469 54 1e-131 MEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDAAISVISQKMTVGLD GFTLLAIPFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNILANTLFGAISGSAV ASAAAVGGIMSPLQEKEGYDPAFSAAVNIASAPIGLMIPPSNVLIVYSLASGGTSVAALF LAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESIPSLMLIFIIIGGII AGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIVLLLVGCSMGMSWAM TNADVPELINELITRVSDNKWVILFIINIILLIVGTFMDITPAILIFTPIFLPIAQHLGI DPIHFGIIMVFNLTIGLCTPPVGTILFVGCSIGKVSIDRAIKPLLPMFLALFVVMAIICY FPQLSLMLPGLFST >gi|296918697|gb|GG773003.1| GENE 248 263639 - 264121 240 160 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020580|ref|YP_526407.1| ribosomal protein S3 [Saccharophagus degradans 2-40] # 1 147 1 147 164 97 31 8e-19 MRTLTHILNKILAGCCCIILAIMVFCVTWQVIARFIFNAPSTVLDEFTQILFMWMILLGG VYTAGLKKHLAIDLLAQKLPAASVLTLDSFIQIIITVFAVIFMIYGGNIVVEKAQHVGQI SPVLKWPMDKVYWVMPVSGLILVWYSVMNIIDNYRKRNSH >gi|296918697|gb|GG773003.1| GENE 249 264163 - 265146 726 327 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|239995924|ref|ZP_04716448.1| ribosomal protein L22 [Alteromonas macleodii ATCC 27126] # 7 311 9 313 327 284 46 4e-75 MKALRPLTASLMLLTSCLLISNTTLAKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGE LVIRIYPNATLGNERESLELMNSGALQMVKVNAASLESFAPDYSLFRLPFLFRDRDHYYR VLQSDLGKKILNSSERKGFVGITYYDGGARSFYSNKPITKPEDLAGMKIRVQQSPSAIAM MKALGGVATPMAQGELYTALQQGVVDGGENNTVVYADMRHAEVAKVYSRDEHTMVPDVLI ISTDVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFK ERVKPLYDEFKAKDAQSAKNLELVESM >gi|296918697|gb|GG773003.1| GENE 250 265219 - 266229 919 336 aa, chain - ## HITS:1 COG:STM3081 KEGG:ns NR:ns ## COG: STM3081 COG2055 # Protein_GI_number: 16766382 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 333 1 333 335 515 77.0 1e-146 MTTVYVSEENLKSLVHHKLHTAGLDTDTIQQVTDVLVHADITGVHSHGVMRVEHYCTRLA AGGLNKAPQFSIEQISPSVAILDSDDGMGHSALISATEHAIKLAQQEGLGFVSVKNTSHC GALSYFAEMITHKGLVAIVMTQTDTCVAPHGGAERFLGTNPIAFGFPVENSHPMIVDMAT SATTFGKILHAKETGKHIGEGLAIDKNGYGTTDPYKIENLLPFGQHKGSGIALAIDALTG VLMNANFGNHIVRMYGDYDKMRKLASLVIAIDPKKLGNPVFAKTMAKMVTELHAVKPAPG VEKVLAPNDPQMHYKEKCQQEGIPVPAGIFHYLAEN >gi|296918697|gb|GG773003.1| GENE 251 266240 - 267256 509 338 aa, chain - ## HITS:1 COG:STM3082 KEGG:ns NR:ns ## COG: STM3082 COG1063 # Protein_GI_number: 16766383 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 338 1 338 338 483 72.0 1e-136 MKTLICQQPGVMEYVEKDIPTPADNEVLLKIKAVGICGTDIHAFAGRQPFFSYPRVLGHE ICAEAVSRGSQCQTAQSGQRYSVIPCIPCGECAACREEKTNCCERVSLYGVHQDGGFSEY LAVREDNLVPLPDEVSDSAGALVECFAIGAHAVRRAEIKAEQNVLVIGAGPIGLATAAIA RAKGAHVVVADIDCQRRQHVVDHLAINVFDPTQEGFIAALSEVFGGELACVVLDATGNKA SMSHDVNLIRHGGKIVFIGLYIGELVIDDPTFHKKETTLLSSRNATRKDFALVIELMRSN KIHENLMKNQAFNFFSVGEDYQRNVVENKNMVKGVITF >gi|296918697|gb|GG773003.1| GENE 252 267253 - 268725 993 490 aa, chain - ## HITS:1 COG:STM3083 KEGG:ns NR:ns ## COG: STM3083 COG0246 # Protein_GI_number: 16766384 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Salmonella typhimurium LT2 # 9 486 10 488 490 648 63.0 0 MSGNESIAAAHYDQVTTWPRDGLQADIVHIGFGAFHRGHQAVYTDLANQLSDTRWGIFEI NLFGDAQLIENLNAQNGLFSVVETSASQSTSRLVRSVAGGIHTPRDGIAAAIHKLAEPQV KIVSLTITEKGYCLDPQTRSLDLTNGLINHDLQNPDAPQSAIGVIVCALQQRKAAGLAAF SVLSCDNLPDNGHLTRNAVLGFARQLDQPLAQWIEENVSFPGTMVDRIVPAMTESQFALL ETKTGYADPCGIVCESFRQWVIEDNFVRGRPEWDKAGAMFVSNVQPYEEMKLRMLNGSHS FLAYNGSLAGYEFIWQCMEDANFRSITHQLMINEQARTLNPDLNINIQEYADLLIERFSN RNVAHRTGQIAMDGSQKLPQRALTPWLKLHQQKQNNAVLSLLVAGWLHYVIDAVEKSQSV ADPMNDQFQALIKEQQDAWQQALALLHLSAIFGDLSNHQPFINEIKIAFANIKNKGIKAT ISQLLSDEQK >gi|296918697|gb|GG773003.1| GENE 253 269048 - 269797 697 249 aa, chain - ## HITS:1 COG:STM3084 KEGG:ns NR:ns ## COG: STM3084 COG2186 # Protein_GI_number: 16766385 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 248 18 265 266 378 77.0 1e-105 MEQVITKRRYYDIGLQIEELLYSGVFKAGERLPSERELSERFNTSRTTIREAIIMLELKG VLNVKQGSGIFFVDSTDKLNQKSLMPYSEIGPFELLQARQVIESNITGFAASQISFNELQ ELKKIISLQENAIAAESDRFEDLDHRFHSIIAEATQNRVLIKQAAELWRAVRTENPRWKK LNYKYLHEKHLRLQWLEDHRAIFLALQQKDSELAREASWRHLENSKNELIKIFKQDASIS DFDDFFFAR >gi|296918697|gb|GG773003.1| GENE 254 270049 - 272268 2185 739 aa, chain + ## HITS:1 COG:ECs3900 KEGG:ns NR:ns ## COG: ECs3900 COG1032 # Protein_GI_number: 15833154 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 739 1 739 739 1513 99.0 0 MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS FGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRR LRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR RSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKV KGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRV PHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE AMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASST QSRLQNAGAKKRPKAAVGR >gi|296918697|gb|GG773003.1| GENE 255 272310 - 272567 331 85 aa, chain - ## HITS:1 COG:yqhH KEGG:ns NR:ns ## COG: yqhH COG4238 # Protein_GI_number: 16130912 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein lipoprotein # Organism: Escherichia coli K12 # 1 85 1 85 85 149 98.0 2e-36 MKTIFTVGAVVLATCLLSGCVNEQKINQLASNVQTLNAKIARLEQDMKALRPQIYAAKSE ANRANTRLDAQDYFDCLRCLRMYAE >gi|296918697|gb|GG773003.1| GENE 256 272618 - 273544 757 308 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3393 NR:ns ## KEGG: ECS88_3393 # Name: yqhG # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 308 1 308 308 610 100.0 1e-173 MKIILLFLAALASFTVHAQPPSQTVEQTVRHIYQNYKSDATAPYFGETGERAITSARIQQ ALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTDADHADAVVRFRIFKDDKE KTSQTLKMVAENGRWVIGDIVSNHGSVLQAVNSENEKTLAAIASLQKEQPEAFVAELFEH IADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDMQIERQFIYDNPICFGEESLFSR VDEIRVLEKTTDSARIHVRFTLTNGNNEEQELILQRREGKWEIADFIRPNSGSLLKQIEA KTAARLKQ >gi|296918697|gb|GG773003.1| GENE 257 273744 - 274571 872 275 aa, chain - ## HITS:1 COG:STM3165 KEGG:ns NR:ns ## COG: STM3165 COG0656 # Protein_GI_number: 16766465 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Salmonella typhimurium LT2 # 1 275 1 275 275 496 92.0 1e-140 MANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKA LKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAW KGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHK IQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIVE NFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG >gi|296918697|gb|GG773003.1| GENE 258 274676 - 275839 1492 387 aa, chain - ## HITS:1 COG:yqhD KEGG:ns NR:ns ## COG: yqhD COG1979 # Protein_GI_number: 16130909 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Escherichia coli K12 # 1 387 1 387 387 780 99.0 0 MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALKGMDVL EFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHIL QTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDKQAFHSAHVQPVFAVLDPVYT YTLPSRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAEGILLTLIEDGPKALKEPENYDV RANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTK RAKLLQYAERVWNITEGSDDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIPALLKKL EEHGMTQLGENHDITLDVSRRIYEAAR >gi|296918697|gb|GG773003.1| GENE 259 276033 - 276932 831 299 aa, chain + ## HITS:1 COG:yqhC KEGG:ns NR:ns ## COG: yqhC COG2207 # Protein_GI_number: 16130908 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 299 77 375 375 597 99.0 1e-171 MKREEICRLLADKVNKLKNKENSLSELLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN >gi|296918697|gb|GG773003.1| GENE 260 276972 - 277631 598 219 aa, chain - ## HITS:1 COG:ECs3893 KEGG:ns NR:ns ## COG: ECs3893 COG0586 # Protein_GI_number: 15833147 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 384 100.0 1e-106 MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLPASFLPGDSLLILAGAL IAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGWLAQLPAKYHQRATCMFDR HGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLSGLLWVSVVTSFGYALSMIPF VKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNA >gi|296918697|gb|GG773003.1| GENE 261 277771 - 278958 1027 395 aa, chain - ## HITS:1 COG:metC KEGG:ns NR:ns ## COG: metC COG0626 # Protein_GI_number: 16130906 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli K12 # 1 395 1 395 395 811 98.0 0 MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRG TLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFVEQGDHVLMTNTAYEPSQDFCSK ILSKLGVTTSWFDPLIGADIVNHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDA IIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLM GQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGYEFW KRDFTGSSGLFSFVLKKKLNDEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRP QGKIDFSGTLIRLHIGLEDVDDLIADLDAGFARIV >gi|296918697|gb|GG773003.1| GENE 262 279225 - 279944 779 239 aa, chain + ## HITS:1 COG:ECs3890 KEGG:ns NR:ns ## COG: ECs3890 COG0811 # Protein_GI_number: 15833144 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Escherichia coli O157:H7 # 1 239 6 244 244 441 100.0 1e-124 MQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEA RSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQ MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG >gi|296918697|gb|GG773003.1| GENE 263 279951 - 280376 580 141 aa, chain + ## HITS:1 COG:ECs3889 KEGG:ns NR:ns ## COG: ECs3889 COG0848 # Protein_GI_number: 15833143 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 252 100.0 2e-67 MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVDVKVNLPASTSTPQPRP EKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMD TLHQAGYLKIGLVGEETAKAK >gi|296918697|gb|GG773003.1| GENE 264 280415 - 281299 890 294 aa, chain - ## HITS:1 COG:ECs3887 KEGG:ns NR:ns ## COG: ECs3887 COG1028 # Protein_GI_number: 15833141 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 294 1 294 294 555 99.0 1e-158 MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSG IGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVH EAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGAS IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG GQTQDKIPQFGQKTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG >gi|296918697|gb|GG773003.1| GENE 265 281490 - 281984 638 164 aa, chain + ## HITS:1 COG:ECs3886 KEGG:ns NR:ns ## COG: ECs3886 COG2862 # Protein_GI_number: 15833140 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 271 100.0 5e-73 MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPNIFSMAESDLILVLLSL VDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIH LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLTRHNH >gi|296918697|gb|GG773003.1| GENE 266 282024 - 283064 989 346 aa, chain - ## HITS:1 COG:yghZ KEGG:ns NR:ns ## COG: yghZ COG0667 # Protein_GI_number: 16130899 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 346 1 346 346 687 98.0 0 MVWLANPERYGRMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHF DLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASL DQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHSVQSGKALYVGISSYSPERTQKMVE LLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQ DSRMHREGNKVRGLTPKMLTEANLNSLRLLHEMAQQRGQSMAQMALSWLLKDERVTSVLI GASRAEQLEENVQALNNLTFSTEELAQIDQHIADGELNLWQASSDK >gi|296918697|gb|GG773003.1| GENE 267 283221 - 284108 783 295 aa, chain + ## HITS:1 COG:Z4353 KEGG:ns NR:ns ## COG: Z4353 COG0412 # Protein_GI_number: 15803544 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Escherichia coli O157:H7 EDL933 # 1 295 14 308 308 576 97.0 1e-164 MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTALALFDLLKPNYALATQ VEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVTRR VAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTKLMNDFFAAIEFMQRYPQATGKV GISGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADVAKIEAPLLLHYAELDSRINEGW PAYEAALKANNKVYEAYIYPEVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS >gi|296918697|gb|GG773003.1| GENE 268 284227 - 284514 324 95 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3148 NR:ns ## KEGG: ECIAI1_3148 # Name: yghW # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 95 1 95 95 184 100.0 1e-45 MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGIL TRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN >gi|296918697|gb|GG773003.1| GENE 269 284703 - 285821 1172 372 aa, chain + ## HITS:1 COG:ECs3882 KEGG:ns NR:ns ## COG: ECs3882 COG1740 # Protein_GI_number: 15833136 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I small subunit # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 703 100.0 0 MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVTNPQRPPVIWIGAQECT GCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDGS IPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVL PGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKNRPTFAYGRLIHEHCERRPHFDA GRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQFCDVGGVWPVAIGHPCYGCNEEGI GFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSAGAIGLLGGVVGLVAGVSVMAVRELGR QQKKDNADSRGE >gi|296918697|gb|GG773003.1| GENE 270 285824 - 286810 984 328 aa, chain + ## HITS:1 COG:ECs3881 KEGG:ns NR:ns ## COG: ECs3881 COG0437 # Protein_GI_number: 15833135 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 328 1 328 328 670 99.0 0 MNRRNFIKAASCGALLTGALPSVSHAAAESRPPIPGSLGMLYDSTLCVGCQACVTKCQDI NFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEENGYAYIKKQCMHCVDPNC VSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYDYNNPFGALHKCELCNQK GVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRLALKPGSEYHYPRQTLKSGDTYL HTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPKLDDLSTGARSEHVQHTLYKGMMLP LAVLAGLTVLVRRNTKNDHHDGGDDHES >gi|296918697|gb|GG773003.1| GENE 271 286800 - 287978 1598 392 aa, chain + ## HITS:1 COG:hybB KEGG:ns NR:ns ## COG: hybB COG5557 # Protein_GI_number: 16130895 # Func_class: C Energy production and conversion # Function: Polysulphide reductase # Organism: Escherichia coli K12 # 1 392 1 392 392 716 99.0 0 MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSDLNGGFPWGVWIAFDLL IGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLGGLSITIDVGRYWNLPYFY IPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWKLSLKRLNKVMFFIIALGALL PTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAFIMGFSIVIFEGSLVQAGLRGNG PDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLSLAFAGDFYSVMFWIEVLLMLFPLV VLRVAKLRNDSRMLFLSALSALLGCATWRLTYSLVAFNPGGGYAYFPTWEELLISIGFVA IEICAYIVLIRLLPILPPLKQNDHNRHEASKA >gi|296918697|gb|GG773003.1| GENE 272 287975 - 289678 2032 567 aa, chain + ## HITS:1 COG:ECs3879 KEGG:ns NR:ns ## COG: ECs3879 COG0374 # Protein_GI_number: 15833133 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I large subunit # Organism: Escherichia coli O157:H7 # 1 567 1 567 567 1185 100.0 0 MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRI CGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALDWVDIT SALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVASGQLGIFANGYWGHPAMKLP PEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNLAVGGVANPINLDGLGVLNLERL MYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRGKGAVNYLSVPEFPTDSKNGSFLFP GGYIENADLSSYRPITSHSDEYLIKGIQESAKHSWYKDEAPQAPWEGTTIPAYDGWSDDG KYSWVKSPTFYGKTVEVGPLANMLVKLAAGRESTQNKLNEIVAIYQKLTGNTLEVAQLHS TLGRIIGRTVHCCELQDILQNQYSALITNIGKGDHTTFVKPNIPATGEFKGVGFLEAPRG MLSHWMVIKDGIISNYQAVVPSTWNSGPRNFNDDVGPYEQSLVGTPVADPNKPLEVVRTI HSFDPCMACAVHVVDADGNEVVSVKVL >gi|296918697|gb|GG773003.1| GENE 273 289678 - 290172 614 164 aa, chain + ## HITS:1 COG:hybD KEGG:ns NR:ns ## COG: hybD COG0680 # Protein_GI_number: 16130893 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 164 1 164 164 290 99.0 1e-78 MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAGMELLGDMANRDHLII ADAIVSKKNAPGTMMILRDEEVPALFTNKISPHQLGLADVLSALRFTGEFPKKLTLVGVI PESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPREATHD >gi|296918697|gb|GG773003.1| GENE 274 290165 - 290653 471 162 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3374 NR:ns ## KEGG: ECS88_3374 # Name: hybE # Def: hydrogenase 2-specific chaperone # Organism: E.coli_S88 # Pathway: not_defined # 1 162 1 162 162 328 100.0 6e-89 MTEEIAGFQTSPKVQVQAAFEEIARRSMHDLSFLHPSMPVYVSDFTLFEGQWTGCVITPW MLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGVSQYLSCSLMSPLSHSMSI EEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGENA >gi|296918697|gb|GG773003.1| GENE 275 290646 - 290987 305 113 aa, chain + ## HITS:1 COG:hybF KEGG:ns NR:ns ## COG: hybF COG0375 # Protein_GI_number: 16130891 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Escherichia coli K12 # 1 113 1 113 113 199 99.0 1e-51 MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAVRFSFEIVCHGTVAQGC DLHIVYKPAQAWCWDCSQVVEIHQHDAQCPICHGERLRVDTGDSLIVKSIEVE >gi|296918697|gb|GG773003.1| GENE 276 291000 - 291248 360 82 aa, chain + ## HITS:1 COG:ECs3875 KEGG:ns NR:ns ## COG: ECs3875 COG0298 # Protein_GI_number: 15833129 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 82 1 82 82 152 100.0 1e-37 MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADLLGQWVLVHVGFAMSII DEDEAKATLDALRQMDYDITSA >gi|296918697|gb|GG773003.1| GENE 277 291381 - 292247 936 288 aa, chain - ## HITS:1 COG:ECs3874 KEGG:ns NR:ns ## COG: ECs3874 COG0625 # Protein_GI_number: 15833128 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 288 17 304 304 598 99.0 1e-171 MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHPLQLYSLGTPNGQKVTI MLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHNPPIRVFESGS ILLYLAEKFGYFLPQDLAKRTETMSWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFT MEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGNVVLGGVYDAAEFLDAGSYKHVQ RWAKEVGERPAVKRGRIVNRINGPLNEQLHERHDASDFETNTEDKRQG >gi|296918697|gb|GG773003.1| GENE 278 292452 - 294311 2038 619 aa, chain + ## HITS:1 COG:Zgsp_2 KEGG:ns NR:ns ## COG: Zgsp_2 COG0754 # Protein_GI_number: 15803533 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Escherichia coli O157:H7 EDL933 # 233 619 1 387 387 813 98.0 0 MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVFRSYIDDEYMGHKWQCV EFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQAFPNGSPRAPVAGALLIW DKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHTPLPQGQQWTRELEMVVENGGYTLKDTF DDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLENKGQFDGKWLDEKDPLQNAYVQA NGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPR LRLSWQRRRHHMITGRMDFCMDERGLKVYEYNADSASCHTEAGLILERWAEQGYKGNGFN PAEGLINELAGAWKHSRARPFVHIMQDKDIEENYHAQFMEQALQQAGFETRILRGLEELR WDAAGQLIDGEGRQVNCVWKTWAWETAFDQIREVSDREFAAVPIRTGHPQNEVRLIDVLL RPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCG SNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGD ESLVIKKESDIEPLIVVKE >gi|296918697|gb|GG773003.1| GENE 279 294603 - 296102 1387 499 aa, chain + ## HITS:1 COG:pitB KEGG:ns NR:ns ## COG: pitB COG0306 # Protein_GI_number: 16130887 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Escherichia coli K12 # 1 499 1 499 499 886 99.0 0 MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMQPQLAVVMAAFF NFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLLAAIIWNLGTWFFGLPASS SHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLIVSPIVGLVIAGGLIFLLRRF WSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSAAGVAFSHGANDGQKGIGLVMLV LVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQHPELPQKLITMEPPLPAASTDGAQ VTEFHCHPANTFDAIARVKTMLPGNMESYEPLSVSQRSQLRRIMLCISDTSAKLAKLPGV SKEDQNLLKKLRSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVAMTIGEKIGKRGMTY AQGMAAQMTAAVSIGLASYIGMPVSTTHVLSSAVAGTMVVDGGGLQRKTVTSILMAWVFT LPAAIFLSGGLYWIALQLI >gi|296918697|gb|GG773003.1| GENE 280 296151 - 296843 573 230 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3368 NR:ns ## KEGG: ECS88_3368 # Name: yghT # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 230 1 230 230 462 100.0 1e-129 MQSIIPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGK SLHKTIERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQI PGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNVDLEVACARKPDHKR ESLARKIAITPQLTFGGAQLVDIDANQPLEKVLVDAEKAITDFMTARGYH >gi|296918697|gb|GG773003.1| GENE 281 297033 - 297731 337 232 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3367 NR:ns ## KEGG: ECS88_3367 # Name: yghS # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 232 6 237 237 471 100.0 1e-131 MSIINSTPVRVIAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPV IGAPFGRYLRSKAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKNQQGYLLITDR YPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFA RKPDHQLAALQEKIAVTPQLTFNGARILELDGRQPADEILQASLRAIHAALS >gi|296918697|gb|GG773003.1| GENE 282 297763 - 298521 532 252 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3366 NR:ns ## KEGG: ECS88_3366 # Name: yghR # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 252 1 252 252 486 100.0 1e-136 MDALQTQTVKSTTAPQPNYIPGLIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLS GEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQR LAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISRFLAQRERRLYQKMAQYRPELI IRLGIDIDTAISRKPDHDYAELQDKIGVMSTIGYNGTKILEIDSRAPYSEVLEQAQKAVS LVAIVSDRRSLT >gi|296918697|gb|GG773003.1| GENE 283 298717 - 299916 865 399 aa, chain + ## HITS:1 COG:yghQ KEGG:ns NR:ns ## COG: yghQ COG2244 # Protein_GI_number: 16130883 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 1 305 21 325 325 571 99.0 1e-163 MFGVLVIVQSYAKSISDFIKFQTWQLVVQYGTPALTNNDPQQFRNVVSFSFSLDIVSGAV AIVGGIALLPFLSHSLGLDDQSFWLAALYCTLIPSMASSTPTGILRAVDRFDLIAVQQAT KPFLRAAGSVVAWYFDFGFAGFVIAWYVSNLVGGTMYWWFAARELRRRNIHNAFKLNLFE SARHIKGAWSFVWSTNIAHSIWSARNSCSTVLVGIVLGPAAAGLFKIAMTFFDAAGTPAG LLGKSFYPEVMRLDPRTTRPWLLGVKSGLLAGGIGILVALAVLIVGKPLISLVFGVKYLE AYDLIQVMLGAIVISMLGFPQESLLLMAGKQRAFLVAQTIASIGYIVLLFMFCHLFGVLG AAFAYFGGQCLDVVLSLIPTLKAFFQRHSLLYNSTGEKS >gi|296918697|gb|GG773003.1| GENE 284 299916 - 300752 634 278 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3364 NR:ns ## KEGG: ECS88_3364 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 278 1 278 278 556 100.0 1e-157 MMRKYFPLEASERLFVAIEEDDVVDAQVSLPPTIALSCTTEIIHDNYALCLKFWLDGVNR QELLRLIRKQAKGDELTTDERKQFKYMRARYKHLRFAQRLYLKKHQAGFLFGKTTVFLGH FQDGFRNGKKNIVSFYGNLLRVYLSSPVWWLVNYSLRHGQLETVNGFIAYRQKQMYILKE IIAKPQLTGREFHDVRKIISQQVSYYDTLRSLDPENKEALLISRFLAAINGLMGDKHDDM VADDMDNRRSYDAPVALDSDIRQRLELLISRFPLYPEQ >gi|296918697|gb|GG773003.1| GENE 285 300752 - 301312 433 186 aa, chain + ## HITS:1 COG:ytfJ KEGG:ns NR:ns ## COG: ytfJ COG3054 # Protein_GI_number: 16132038 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Escherichia coli K12 # 1 184 1 183 184 206 55.0 2e-53 MPSRWIVALIIALLAPGAAAHNFVTGKTVTPVYIQEGGELLLNSDDEIHYQKWNSTQLTG KVRIIQYIAGRKSAKKKNSLLIKAVEAANFSQDRFQPTTIVNTDDAIFGTGYFVVGKIEK NKRRYPWAQFVIDGNGLGRVAWQLPEQSSTILVLNKAGRIQWAKDGSLTPEEVDHVIALA QKLINE >gi|296918697|gb|GG773003.1| GENE 286 301343 - 302413 932 356 aa, chain + ## HITS:1 COG:PA3828 KEGG:ns NR:ns ## COG: PA3828 COG0795 # Protein_GI_number: 15599023 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 3 343 2 351 372 122 29.0 8e-28 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA LEMLLPVGLYASVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP NVKRKAKSVTELARSVFPADHAELQWRQSRGLTALLMALLAISLSRVKPRQGRFSTLLPL TLLFVAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVARDFSLLQKFPR >gi|296918697|gb|GG773003.1| GENE 287 302410 - 303489 852 359 aa, chain + ## HITS:1 COG:VC2499 KEGG:ns NR:ns ## COG: VC2499 COG0795 # Protein_GI_number: 15642495 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Vibrio cholerae # 33 352 34 352 356 149 29.0 9e-36 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW VASPLQQQALQIKSTATALGEDNDIIGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD DLSLESYIYARSATIEDDKTWILHGVNYKKWLNGKETLETLDNLAWQSAFTSMNLEELSM PGNTFSVRQLNHYIHYLQDTGQPSSEYHLALWEKLGQPILTLAMILLAVPFTFSVPRSPG MGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDRQH >gi|296918697|gb|GG773003.1| GENE 288 303560 - 304732 1138 390 aa, chain - ## HITS:1 COG:CC1162 KEGG:ns NR:ns ## COG: CC1162 COG0156 # Protein_GI_number: 16125414 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Caulobacter vibrioides # 1 386 1 387 404 403 54.0 1e-112 MGLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKKVILAGTNNYLGLTFNH DAIREGQAALAAQGTGTTGSRMANGSYAPHLALEKEIAEFFNRPTAIVFSTGYTANLGVI STLADHNAVVLLDADSHASIYDACSLGGAEIIRFRHNDVNDLERRMVRLGERAKEAIIIV EGIYSMLGDVAPLAEIVDIKRRLGGYLIVDEAHSFGVLGATGRGLAEAVGVEDDVDIIVG TFSKSLASIGGFAVGSEAMEVLRYGSRPYIFTASPSPSCIATVRSSLRTIASQPELRQKL MDNANHLYDGLQKLGYELSSHISPVVPVIIGSKEEGLRIWRKLISLGVYVNLILPPAAPA GITLLRCSVNAAHSREQIDAIIQAFATQKQ >gi|296918697|gb|GG773003.1| GENE 289 304732 - 304980 263 82 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3359 NR:ns ## KEGG: ECS88_3359 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 82 1 82 82 123 100.0 3e-27 MVNREIVMDYILSCLQDLVENGVEIKPDSDLVNDLGLESIKVMDLLMMLEDRFDISIPIN ILLDVKTPAQLMETLLPWLENN >gi|296918697|gb|GG773003.1| GENE 290 305012 - 305926 769 304 aa, chain - ## HITS:1 COG:CC1164 KEGG:ns NR:ns ## COG: CC1164 COG0702 # Protein_GI_number: 16125416 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Caulobacter vibrioides # 5 287 9 288 317 121 33.0 2e-27 MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNLTWVRGSLEDTHSLSEL VAGASAVVHCAGQVRGHKEEIFTRCNVDGSLRLMQAAKESGFCQRFLFISSLAARHPELS WYANSKHVAEQRLTAMADEITLGVFRPTAVYGPGDKELKPLFDWMLRGLLPRLGTPETQL SFLHVTDFAQAVSQWLSAETVQTQTYELCDGVAGGYDWQRVQQLVADVRCGSVRMVGIPQ PLLTCLADISTALNRLAGKEPMLTRSKIRELTHADWSASNNRISEDINWFPGISLEHALR NGLF >gi|296918697|gb|GG773003.1| GENE 291 305923 - 307614 1161 563 aa, chain - ## HITS:1 COG:CC1165 KEGG:ns NR:ns ## COG: CC1165 COG0318 # Protein_GI_number: 16125417 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Caulobacter vibrioides # 1 548 11 560 567 439 43.0 1e-123 MRYADFPTLVDALDYAALSSAGMNFYDRRCQLEDQLEYQTLKARAEAGAKRLLSLNLKKG DRVALIAETSSGFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIIT GDEWLPLVNAATHNNNPELHVLSHAWFKALPEADVVLQRPVPNDIAYLQYTSGSTRFPRG VIITHHEVMANLRAISHDGIKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQ DFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEPISA EQLHQFAECFRQVNFDDKTFMPCYGLAENALAVSFSDEACGVVVNEVDRDILEYQGKAVA PGAETRAVSTFVNCGKALPEHGIEIRNEADIPVAERVVGHICISGPSLMSGYFGDQVSQD EIAATGWLDTGDLGYLLDGYLYVTGRIKDLIIIRGRNIWPQDIEYIAEQEPEIHSGDAIA FVTAQEKIILQIQCRISDEERRGQLIHALAARIQSEFGVTADIDLLPPHSIPRTSSGKPA RAEAKKRYQKAYAASLHVQESLA >gi|296918697|gb|GG773003.1| GENE 292 308018 - 309160 957 380 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3356 NR:ns ## KEGG: ECS88_3356 # Name: yghO # Def: DNA-binding transcriptional regulator # Organism: E.coli_S88 # Pathway: not_defined # 1 380 1 380 380 799 100.0 0 MECDLLMIKIEKVINKKDLKAFIAFPSSLYPDDPNWIPPLFIERSEHLSAKNPGTDHIIW QAWVAKKAGQIVGRITAQIDTLHRERYGEDTGHFGMIDSIDDPQVFAALFGTAEAWLKSQ GASKISGPFSLNINQESGLLIEGFDTPPCAMMPHGKPWYAAHIEQLGYHKGIDLLAWWMQ RTDLTFSPALKKLMDQVRKKVTIRCINRQRFAEDMQILREIFNSGWQHNWGFVPFTEHEF ATMGDQLKYLVPDDMIYIAEIDSAPCAFIVGLPNINEAIVDLNGSLFPFGWAKLLWRLKV SGVRTARVPLMGVRDEYQFSRIGPVIALLLIEALHDPFARRKIDALEMSWILETNTGMNN MLERIGAEPYKRYRLYEKQI >gi|296918697|gb|GG773003.1| GENE 293 309167 - 309931 531 254 aa, chain - ## HITS:1 COG:glcC KEGG:ns NR:ns ## COG: glcC COG2186 # Protein_GI_number: 16130880 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 251 1 251 254 466 99.0 1e-131 MKDERRPICEVVAESIERLIIDGVLKVGQPLPSERRLCEKLGFSRSALREGLTVLRGRGI IETAQGRDSRVARLNRVQDASPLIHLFSTQPRTLYDLLDVRALLEGESARLAATLGTQAD FVVITRCYEKMLAASENNKEISLIEHAQLDHAFHLAICQASHNQVLVFTLQSLTDLMFNS VFASVNNLYHRPQQKKQIDRQHARIYNAVLQRLPHVAQRAARDHVRTVKKNLHDIELEGH HLIRSAVPLEMKQG >gi|296918697|gb|GG773003.1| GENE 294 310182 - 311681 1523 499 aa, chain + ## HITS:1 COG:glcD KEGG:ns NR:ns ## COG: glcD COG0277 # Protein_GI_number: 16130879 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli K12 # 1 499 1 499 499 996 99.0 0 MSILYEERLDGALPEVDRTSVLMALREHVPGLEILHTDEEIIPYECDGLSAYRTRPLLVV LPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGVLLVMARFKEILDINPIGR RARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLL KIEVQMLDGEALTLGSDALDSPGFDLLALFTGSEGMLGVTTEVTVKLLPKPPVARVLLAS FDSVEKAGLAVGDIIANGIIPGGLEMMDNLSIRAAEDFIHAGYPVDAEAILLCELDGVES DVQEDCERVNDILLNAGATDVRLAQDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPR RALPGVLEGIARLSQQYDLRVANVFHAGDGNMHPLILFDANEPGEFARAEELGGKILELC VEVGGSISGEHGIGREKINQMCAQFNSDEITTFHAVKAAFDPDGLLNPGKNIPTLHRCAE FGAMHVHHGHLPFPELERF >gi|296918697|gb|GG773003.1| GENE 295 311681 - 312733 940 350 aa, chain + ## HITS:1 COG:glcF_1 KEGG:ns NR:ns ## COG: glcF_1 COG0277 # Protein_GI_number: 16130878 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli K12 # 1 318 1 318 369 632 97.0 0 MLRECDYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPVTGQTLDVRCHRGIVNYDPTE LVITARAGTPLVAIEAALESAGQMLPCEPPHYGEEATWGGMVACGLAGPRRPWSGSVRDF VLGTRIITGTGKHLRFGGEVMKNVAGYDLSRLMAGSYGCLGVLTEISMKVLPRPRASLSL RREISLQEAMNEIAQWQLQPLPISGLCYFDNALWIRLEGGEGSVKAARELLGGEEVAGQF WQQLREQQLPFFSLPGTLWRISLPSDAPMMDLPGEQLIDWGGALRWLKSTADDNQIHRIA RNAGGHATRFSAGDGGFAPLPAPLFRYHQQLKQQLDPCGVFNPGRMYAEL >gi|296918697|gb|GG773003.1| GENE 296 312744 - 313967 1061 407 aa, chain + ## HITS:1 COG:glcF_2 KEGG:ns NR:ns ## COG: glcF_2 COG0247 # Protein_GI_number: 16130878 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli K12 # 16 407 1 392 392 777 99.0 0 MQTRLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE GNEVTLKTQEHLDRCLTCRNCETTCPSGVRYHNLLDIGRDIVEQKVKRPLPERMLREGLR QVVPRPAVFRALTQVGLVLRPFLPEQVRAKLPAETVKAKPRPPLRHKRRVLMLEGCAQPT LSPNTNAATARVLDRLGISVMPANEAGCCGAVDYHLNAQEKGLARARNNIDAWWPAIEAG AEAILQTASGCGAFVKEYGQMLKNDALYADKARQVSELAVDLVELLREEPLEKLAIRGDK KLAFHCPCTLQHAQKLNGEVEKVLLRLGFTLTDVPDSHLCCGSAGTYALTHPDLARQLRD NKMNALESGKPEMIVTANIGCQTHLASAGRTSVRHWIEIVEQALEKE >gi|296918697|gb|GG773003.1| GENE 297 313972 - 314376 607 134 aa, chain + ## HITS:1 COG:glcG KEGG:ns NR:ns ## COG: glcG COG3193 # Protein_GI_number: 16130877 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol # Organism: Escherichia coli K12 # 1 118 1 118 134 198 100.0 2e-51 MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLALSRMDDCAPIAAYISQE KARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVVVDGQIIGAVGVSGLTGAQ DAQVAKAAAAVLAK >gi|296918697|gb|GG773003.1| GENE 298 314398 - 316569 2253 723 aa, chain + ## HITS:1 COG:glcB KEGG:ns NR:ns ## COG: glcB COG2225 # Protein_GI_number: 16130876 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Escherichia coli K12 # 1 723 1 723 723 1451 97.0 0 MSQTITQGRLRIDANFKRFVDEEVLPGVELDAAAFWHNVDEIVHDLAPENRQLLAERDRI QAALDEWHRSNPGPVKDKAAYKSFLRELGYLVPQPDHVTVETTGIDSEITSQAGPQLVVP AMNARYALNAANARWGSLYDALYGSDIIPQEGAMVSGYDPQRGEQVIAWVRRFLDESLPL ENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVGYRGDTAAPTCILLKNNGLHIEL QIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVAAVDAEDKILLYRNLLGLMQGTLQE KMEKNGRQIVRKLNDDRQYTAADGSEISLHGRSLLFIRNVGHLMTIPVIWDSEGNEIPEG ILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFSRVETMLGMAPNTL KMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPMLRKNQMKSTP WIKAYERNNVLSGLFCGLRGKAQIGKGMWAMPDLMADMYSQKGDQLRAGANTAWVPSPTA ATLHALHYHQTNVQSVQANIAQTEFNAEFEPLLDDLLTIPVAENANWSAQEIQQELDNNV QGILGYVVRWVEQGIGCSKVPDIHNVALMEDRATLRISSQHIANWLRHGILTKDQVQASL ENMAKVVDQQNAGDPAYRPMVENFANSCAFKAACDLIFLGVKQPNGYTEPLLHAWRLREK ENH >gi|296918697|gb|GG773003.1| GENE 299 316925 - 318607 1772 560 aa, chain + ## HITS:1 COG:yghK KEGG:ns NR:ns ## COG: yghK COG1620 # Protein_GI_number: 16130875 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Escherichia coli K12 # 1 560 1 560 560 914 99.0 0 MITWTQMYMPMGGLGLSALVALIPIIFFFVALAVLRLKGHVAGAITLILSILIAIFAFKM PIDMAFAAAGYGFIYGLWPIAWIIVAAVFLYKLTVASGQFDIIRSSVISITDDQRLQVLL IGFSFGALLEGAAGFGAPVAITGALLVGLGFKPLYAAGLCLIANTAPVAFGALGVPILVA GQVTGIDPFHIGAMAGRQLPFLSVLVPFWLVAMMDGWKGVKETWPAALVAGGSFAVTQFF TSNYIGPELPDITSALVSIVSLALFLKVWRPKNTETAISMGQSAGAMVVNKPSSGGPVPS EYSLGQIIRAWSPFLILTVLVTIWTMKPFKALFAPGGAFYSLVINFQIPHLHQQVLKAAP IVAQPTPMDAVFKFDPLSAGGTAIFIAAIISIFILGVGIKKGIGVFAETLISLKWPILSI GMVLAFAFVTNYSGMSTTLALVLAGTGVMFPFFSPFLGWLGVFLTGSDTSSNALFGSLQS TTAQQINVSDTLLVAANTSGGVTGKMISPQSIAVACAATGMVGRESELFRYTVKHSLIFA SVIGIITLLQAYVFTGMLVS >gi|296918697|gb|GG773003.1| GENE 300 319091 - 323653 3815 1520 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3348 NR:ns ## KEGG: ECS88_3348 # Name: yghJ # Def: inner membrane lipoprotein # Organism: E.coli_S88 # Pathway: not_defined # 1 1520 7 1526 1526 2929 100.0 0 MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPSVDSGSGTLPEVKPDPTPTPEPTP EPTPDPEPTPDPTPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFTPG NTVSCVVGSTTIATFNTQSEAARSLRAVDKVSFSLEDAQELANSENKKTNAISLVTSSDS CPADAEQLCLTFSSVVDRARFEKLYKQIDLATDNFSKLVNEEVENNAATDKAPSTHTSTV VPVTTEGTKPDLNASFVSANAEQFYQYQPTEIILSEGQLVDSLGNGVAGVDYYTNSGRGV TDENGKFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQ NNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLDEGDQNVVLPNEFIEQFKTGQAKEI DTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYQSVSKFHVFHDSTNFYG STGNARGQAVVNISNSAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVQPENVT RDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWGGGVNSKGECTLSGDSDDM KHFMQNVLRYLSNDIWQPNTKSIMTVGTNLENVYFKKAGQVLGNSAPFAFHEDFTGITVK QLTSYGDLNPEEIPLLILNGFEYVTQWSGDPYAVPLRADTSKPKLTQQDVTDLIAYLNKG GSVLIMENVMSNLKEESASSFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRATGIWV YERYPAADGAQPPYTIDPNTGEVTWKYQQDNKPDDKPKLEVASWQEEVEGKQVTRYAFID EAEYTTEESLEAAKAKIFEKFPGLQECKDSTYHYEINCLERRPGTDVPVTGGMYVPRYTQ LNLDADTAKAMVQAADLGTNIQRLYQHELYFRTKGSKGERLNSVDLERLYQNMSVWLWND TKYRYEEGKEDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAGM MNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGSVSAKGESVTENISLYSNPTKWF AGNMQSTGLWAPAQQDVTIKSSASVPVTVTVALADDLTGREKHEVALNRPPRVTKTYTLE ANGEVTFKVPYGGLIYIKGDSKDDVSANFTFTGVVKAPFYKDGEWKNDLDSPAPLGELES ASFVYTTPKKNLEASNFTGGVAEFAKDLDTFASSMNDFYGRNDEDGKHRMFTYKNLTGHK HRFTNDVQISIGDAHSGYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLNVPGA TEVANNVLALYMQDRYLGKMNRVADDITVAPEYLDESNGQAWARGGAGDRLLMYAQLKEW AEENFDIKQWYPDGELPKFYSDRKGMKGWNLFQLMHRKARGDDVGNSTFGGKNYCAESNG NAADTLMLCASWVAQADLSEFFKKWNPGASAYQLPGATEMSFQGGVSSSAYSTLASLKLP KPEKGPETINKVTEHKMSAE >gi|296918697|gb|GG773003.1| GENE 301 323817 - 324626 482 269 aa, chain + ## HITS:1 COG:pppA KEGG:ns NR:ns ## COG: pppA COG1989 # Protein_GI_number: 16130872 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Escherichia coli K12 # 1 269 42 310 310 478 96.0 1e-135 MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGETPSTQSKISLA LPRSHCPHCQQTIRVRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW PESGWGLAVMILSAWLIAASIIDLDNQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG VLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGPLSLPNVALIASCCGLIYAV ITKRGSTTLPFGPCLSLGGIATLYLQALF >gi|296918697|gb|GG773003.1| GENE 302 324692 - 325102 234 136 aa, chain + ## HITS:1 COG:no KEGG:JW2938 NR:ns ## KEGG: JW2938 # Name: yghG # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 136 1 136 136 225 99.0 4e-58 MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQ SSGTTVKMTIISESGTQTTQTPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGN QYQRKLDRTTCGIVKA >gi|296918697|gb|GG773003.1| GENE 303 325120 - 326079 761 319 aa, chain + ## HITS:1 COG:yghF KEGG:ns NR:ns ## COG: yghF COG3031 # Protein_GI_number: 16130870 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulC # Organism: Escherichia coli K12 # 44 319 1 276 288 484 91.0 1e-136 MARVVFRDARIYLIQWLTKIRHILSQRQSLNTDKEHLRKMVRGMFWLMLLIISAKMAYSL WRYFSFSAEYTAVSSSVNKPLRADAKPFDKNDVQLVSQQNWFGKYQPVAAPVKQPESAPV AETRLNVVLRGIAFGARPGVVIEEGGKQQVYLQGERLGSHNAVIEEINRDHVMLRYQGKM ERLSLAEEERPPVAVTSKKAASDEAKQAVAEPVVSAPVEIPAAVRQALAKDPQKIFNYIQ LTPVRKEGIVGYAVKPGADRSLFDASGFREGDIAIALNQQDFTDPRAMIALMRQLPSMDS IQLTVLRKGARYDISIALR >gi|296918697|gb|GG773003.1| GENE 304 326109 - 328169 2107 686 aa, chain + ## HITS:1 COG:gspD KEGG:ns NR:ns ## COG: gspD COG1450 # Protein_GI_number: 16131204 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Escherichia coli K12 # 18 665 5 639 654 500 44.0 1e-141 MFWRDMTLSIWRKKTTGLKTKKRLLPLMLAAALCSSPVWAEEATFTANFKDTDLKSFIET VGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKS SAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELAPILRQMIDSAGSGNVVNYDPS NVIMLTGRASVVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSGENQPA TLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDV LKQVSGTLTAAKEEAEGTVGSGREVVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRR AQVHVEALIVEVAEGSNINFGVQWGSKDAGLMQFANGTQIPIGTLGAAISAAKPQKGSTV ISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSI TTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVI EQEVSKVEGQTSLDVVFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPVI GNLFKSTADKKEKRNLMVFIRPTILRDGMAADGVSQRKYNYMRAEQIYRDEQGLSLMPHT AQPILPAQNQALPPEVRAFLNAGRTR >gi|296918697|gb|GG773003.1| GENE 305 328169 - 329662 1482 497 aa, chain + ## HITS:1 COG:VC2732 KEGG:ns NR:ns ## COG: VC2732 COG2804 # Protein_GI_number: 15642726 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Vibrio cholerae # 14 497 16 503 503 629 67.0 1e-180 MVPVAQETTANTVRLPYSFSRRFSLVAWCEASLEILHVHPLSLSVLQELQRGLNAPFTLR QIDEAEFEQRLNAVWQRDSSEARQLMEDLGSAEDFFTLAEELPETEDLLESDDDAPIIKL INAMLAEAIKEGASDIHIETFEKSLVIRFRVDGTLHEMLRPGRKLASLLVSRIKVMARLD IAEKRVPQDGRIALLLGGRAIDVRVSTMPSAWGERVVLRLLDKNQARLTLERLGLSLELT AQLRQLLHKPHGIFLVTGPTGSGKSTTLYAGLQELNNHSRNILTVEDPIEYMIEGIGQTQ VNTRVGMTFARGLRAILRQDPDVVMVGEIRDTETAEIAVQASLTGHLVLSTLHTNTAVGA ITRLQDMGVEPFLLSSSLTGVMAQRLVRTLCSDCRQAAPATDEEKRLMGISDTHAVTLYH PQGCPACNHKGFRGRTAIHELIVVDATLRDLIHRQAGELELERYVRQHSAGIRSNGIEKV LAGETSLDEVLRVTMEA >gi|296918697|gb|GG773003.1| GENE 306 329662 - 330885 1161 407 aa, chain + ## HITS:1 COG:VC2731 KEGG:ns NR:ns ## COG: VC2731 COG1459 # Protein_GI_number: 15642725 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Vibrio cholerae # 1 405 1 404 406 419 56.0 1e-117 MALFYYQALERNGRKTKGMIEADSARHARQLLRGKDLIPVHIEARMNASAGGLLQRRRHA HRRVATADLALFTRQLATLVQAAMPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLS DSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQRQRLKSRLLQAMLYPLVLLV VATGVVTILLTAVVPKIIEQFDHLGHALPASTRMLIAMSDALQASGVYWLAGLLGLLVLG QRLLKNPAMRLRWDKTLLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVS ANRYVEQQLLLAADRVREGSSLRAALADLRLFPPMMLYMIASGEQSGELETMLEQAAVNQ EREFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPMLQLNNMVGM >gi|296918697|gb|GG773003.1| GENE 307 330902 - 331357 631 151 aa, chain + ## HITS:1 COG:VC2730 KEGG:ns NR:ns ## COG: VC2730 COG2165 # Protein_GI_number: 15642724 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Vibrio cholerae # 6 151 2 146 146 230 76.0 8e-61 MNSLSRTQKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENAL DMYRLDNGRYPTTEQGLEALIQQPANMADARNYRTGGYIKRLPKDPWGNDYQYLSPGEKG LFDVYTLGADGQENGEGAGADIGNWNLQEFQ >gi|296918697|gb|GG773003.1| GENE 308 331394 - 331924 400 176 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3340 NR:ns ## KEGG: ECS88_3340 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: Bacterial secretion system [PATH:ecz03070] # 1 176 12 187 187 334 100.0 1e-90 MLVIFLIGLASAGVVQTFATASEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGY QFMQRRHGQWLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELE LQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNACWAVKLAHDGALSLNQCDERMP >gi|296918697|gb|GG773003.1| GENE 309 331921 - 332292 328 123 aa, chain + ## HITS:1 COG:VC2728 KEGG:ns NR:ns ## COG: VC2728 COG2165 # Protein_GI_number: 15642722 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Vibrio cholerae # 2 112 4 112 117 81 42.0 3e-16 MKRGFTLLEVMLALAIFALAAMAVLQIASGTLSNQQILEEKTVAGWVAENQTALLYLMTR EQRAVRHQGESDMAGSRWYWRTIPLNTGNVLLQAVDIEVSLHDDFSPVIQSRRAWFSAVG GQQ >gi|296918697|gb|GG773003.1| GENE 310 332289 - 332894 332 201 aa, chain + ## HITS:1 COG:VC2727 KEGG:ns NR:ns ## COG: VC2727 COG4795 # Protein_GI_number: 15642721 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Vibrio cholerae # 2 201 10 211 221 119 39.0 5e-27 MRRARAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTH DLTQMMPRPVRGDQGQREPALLAGAGVLVSESGGMRFVRGGVVNPLMRLPRSNLLTVGYR IHDGYLERLAWPLTDAAGSVKPTTQKLIPADSLRLQFYDGTRWQESWSSVQAIPVAVRIT LHSPQWGEIERIWLLRGPQLS >gi|296918697|gb|GG773003.1| GENE 311 332891 - 333868 998 325 aa, chain + ## HITS:1 COG:VC2726 KEGG:ns NR:ns ## COG: VC2726 COG3156 # Protein_GI_number: 15642720 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulK # Organism: Vibrio cholerae # 7 305 5 307 336 212 43.0 7e-55 MITSPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQEYQQALWYSASAESLA LSALSLSLKNEKRVHLAQPWASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTASRPL AVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRLGREDSEYLARSVPFYAANQP LADISEMRVVQGMDAGLYQKLKPLVCALPMARQQININTLDVTQSVILEALFDPWLSPVQ ARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQLKTILSVDSNYFWLRSDITVNEIEL TMNSLIVRMGPQHFSVLWHQTGESE >gi|296918697|gb|GG773003.1| GENE 312 333874 - 335043 745 389 aa, chain + ## HITS:1 COG:yghE KEGG:ns NR:ns ## COG: yghE COG3297 # Protein_GI_number: 16130869 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulL # Organism: Escherichia coli K12 # 104 389 1 286 286 518 95.0 1e-147 MLEIFFPLCAADPIRWQRHTPDVEHGIWPDVADERLQQWLQTDAIRLYIPGEWISVWQVE LPDVPRKQIPTILPALLEEELNQDIDELHFAPLKIDQQLATVAVIHQQHMRNIAQWLQAN GITRATVAPDWMSIPCGFMAGDAQRVICRIDECRGWSAGRALAPVMFRAQLNEQNLPISL TVVGIAPEELSAWAGADAERLTVTALPAITTYGESEGNLLTGPWQPRVSYRKQWARWRVM ILPILLILVALVVERGVTLWSVSEQVAQSRTQAEKKFLTLFPEQKRIVNLRSQVTMALKK YRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQTLHLQLRAANFASFDKLRS ALAADYVVQQDALQKEGDAVSGGVTLRRK >gi|296918697|gb|GG773003.1| GENE 313 335045 - 335581 419 178 aa, chain + ## HITS:1 COG:yghD KEGG:ns NR:ns ## COG: yghD COG3149 # Protein_GI_number: 16130868 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulM # Organism: Escherichia coli K12 # 1 178 1 178 178 332 97.0 3e-91 MLRDKFIHYFQQWRERQLSRGEHWLTQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPL SERIEQQETMLQQLVAMNTRLKNAAPDIIAARKSATTTPAQVSRVISDSASAHSVAIKRI AERGENIQVWIEPVVFNDLLKWLNALDEKYALRVTQIDVSAAEKPGMVNVQRLEFGRG >gi|296918697|gb|GG773003.1| GENE 314 336639 - 337415 555 258 aa, chain + ## HITS:1 COG:SMb20822 KEGG:ns NR:ns ## COG: SMb20822 COG1682 # Protein_GI_number: 16264310 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Sinorhizobium meliloti # 15 250 29 264 274 120 32.0 2e-27 MARSGFEVQKVTVEALFLREIRTRFGKFRLGYLWAILEPSAHLLILLGILGYVMHRTMPD ISFPVFLLNGLIPFFIFSSISKRSIGAIEANQGLFNYRPVKPIDTIIARALLETLIYVAV YILLMLIVWMTGEYFEITNFLQLVLTWSLLIILSCGVGLIFMVVGKTFPEMQKVLPILLK PLYFISCIMFPLHSIPKQYWSYLLWNPLVHVVELSREAVMPGYISEGVSLNYLAMFTLVT LFIGLALYRTREEAMLTS >gi|296918697|gb|GG773003.1| GENE 315 337412 - 338071 100 219 aa, chain + ## HITS:1 COG:Cj1447c KEGG:ns NR:ns ## COG: Cj1447c COG1134 # Protein_GI_number: 15792764 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Campylobacter jejuni # 1 216 1 217 220 242 58.0 3e-64 MIKIENLTKSYRTPTGRHYVFKNLNIIFPKGYNIALIGQNGAGKSTLLRIIGGIDRPDSG NIITEHKISWPVGLAGGFQGSLTGRENVKFVARLYAKRDELNERVDFVEEFSELGKYFDM PIKTYSSGMRSRLAFGLSMAFKFDYYLIDEITAVGDAKFKKKCSDIFDKIREKSHLIMVS HSERALKEYCDVAIYLNKEGQGKFYKNVTEAIADYKKDL >gi|296918697|gb|GG773003.1| GENE 316 338121 - 338744 74 207 aa, chain + ## HITS:1 COG:CC1011 KEGG:ns NR:ns ## COG: CC1011 COG0110 # Protein_GI_number: 16125263 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Caulobacter vibrioides # 44 206 50 213 215 94 30.0 2e-19 MSKKLIIFGAGGFSKSIIDSLNHKHYELIGFIDKYKSGYHQSYPILGNDIADIENKDNYY YFIGIGKPSTRKHYLNIIRKHNLRLINIIDKTAILSPNIILGDGIFIGKMCILNRDTRIH DAVVINTRSLIEHGNEIGCCSNISTNVVLNGDVSVGEETFVGSCTVVNGQLKLGSKSIIG SGSVVIRNIPSNVVVAGTPTRLIRGNE >gi|296918697|gb|GG773003.1| GENE 317 338741 - 339781 240 346 aa, chain + ## HITS:1 COG:Cj1327 KEGG:ns NR:ns ## COG: Cj1327 COG2089 # Protein_GI_number: 15792650 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sialic acid synthase # Organism: Campylobacter jejuni # 1 336 1 332 334 326 51.0 4e-89 MSNIYIVAEIGCNHNGSVDIAREMILKAKEAGVNAVKFQTFKADKLISAIAPKAEYQIKN TGELESQLEMTKKLEMKYDDYLHLMEYAVSLNLDVFSTPFDEDSIDFLASLKQKIWKIPS GELLNLPYLEKIAKLPIPDKKIIISTGMATIDEIKQSVSIFINNKVPVGNITILHCNTEY PTPFEDVNLNAINDLKKHFPKNNIGFSDHSSGFYAAIAAVPYGITFIEKHFTLDKSMSGP DHLASIEPDELKHLCIGVRCVEKSLGSNSKVVTASERKNKIVARKSIIAKTEIKKGEVFS EKNITTKRPGNGISPMEWYNLLGKIAEQDFIPDELIIHSEFKNQGE >gi|296918697|gb|GG773003.1| GENE 318 340414 - 341037 38 207 aa, chain + ## HITS:1 COG:PM1710 KEGG:ns NR:ns ## COG: PM1710 COG2755 # Protein_GI_number: 15603575 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Pasteurella multocida # 21 199 5 190 204 99 31.0 5e-21 MDFELAITIQQKKNRQKILYQNIHNRINEKRNEFDSVSDITLIGHSLFDYWDVKKINDIE VNNLGIAGINSKEYYEYIIEKELIVNFGEFVFIFFGTNDIVVSDWKKEDTLWYLKKTCQY IKKKNAASKIYLLSVPPVFGRIDRDNRIINDLNSYLRENVDFAKFISLDHVLKDSYGNLN KMYTYDGLHFNSNGYTVLENEIAEIVK >gi|296918697|gb|GG773003.1| GENE 319 341466 - 342209 234 247 aa, chain + ## HITS:1 COG:Cj1328 KEGG:ns NR:ns ## COG: Cj1328 COG0381 # Protein_GI_number: 15792651 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Campylobacter jejuni # 1 239 146 384 384 131 35.0 1e-30 MSKLHLTSTEEYKKRVIQLGEKPGSVFNIGSLGAENALSLHLPNKQELELKYGSLLKRYF VVVFHPETLSTQSVNDQIDELLSAISFFKNTHDFIFIGSNADTGSDIIQRKVKYFCKEYK FRYLISIRSEDYLAMIKYSCGLIGNSSSGLIEVPSLKVATINIGDRQKGRVRGASVIDVP VEKNAIVRGINISQDEKFISVVQSSSNPYFKENALINAVRIIKDFIKSKNKDYKDFYDIP ECTTSYD >gi|296918697|gb|GG773003.1| GENE 320 342799 - 343350 -7 183 aa, chain + ## HITS:1 COG:no KEGG:APECO1_3475 NR:ns ## KEGG: APECO1_3475 # Name: neuE # Def: polysialic acid biosynthesis protein NeuE # Organism: E.coli_APEC # Pathway: not_defined # 1 183 209 391 391 313 100.0 2e-84 MNFIFKTRNPLISPDSIVFDIKEYIERFDLKNITFSDDNIDSLISKVEYCITISSSVAIY CLANKIKVYLINGFNHTCNGQCYFSRSGLIVDYNKFNFKHIPRIKKKWMEENFYYSRDIQ HKILNDILKMPPNVNVRTFGIKRSTLIILFLIFFNFFFSLGPKKIKTLKKIHKVLLRYKK DDI >gi|296918697|gb|GG773003.1| GENE 321 343754 - 344569 -164 271 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_3439 NR:ns ## KEGG: ECIAI39_3439 # Name: neuS # Def: poly-alpha-2,8 sialosyl sialyltransferase # Organism: E.coli_IAI39 # Pathway: not_defined # 1 271 139 409 409 502 100.0 1e-141 MSYAQHYAIFVYLFKKNNIRCSLIEEGTGTYKTEKENPVVNINFYSEIINSIILFHYPDL KFENVYGTYPILLKKKFNAQKFVEFKGAPSVKSSTRIDNVIHKYSITRDDIIYANQKYLI EHTLFADSLISILLRIDKPDNARIFIKPHPKEPKKNINAIQKAIKKAKCRDIILITEPDF LIEPVIKKAKIKHLIGLTSSSLVYAPLVSKRCQSYSIAPLMIKLCDNDKSQKGINTLRLH FDILKNFDNVKILSDDITSPSLHDKRIFLGE >gi|296918697|gb|GG773003.1| GENE 322 344719 - 345924 419 401 aa, chain - ## HITS:1 COG:PM0772 KEGG:ns NR:ns ## COG: PM0772 COG3562 # Protein_GI_number: 15602637 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsule polysaccharide export protein # Organism: Pasteurella multocida # 1 389 4 397 408 272 37.0 7e-73 MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLA YYQTPKEFPGWLRDLHRQYDFDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQF ITVEEDGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTMKRIGHAMWYYLMGWHYRHEF PRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLSER VIYVHDLPMPELLRHAKAVVTINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFW QADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNIY >gi|296918697|gb|GG773003.1| GENE 323 345959 - 347986 1126 675 aa, chain - ## HITS:1 COG:NMB0082 KEGG:ns NR:ns ## COG: NMB0082 COG3563 # Protein_GI_number: 15676015 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsule polysaccharide export protein # Organism: Neisseria meningitidis MC58 # 4 643 26 673 704 613 50.0 1e-175 MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI RYYRKLIMFCKVRFG >gi|296918697|gb|GG773003.1| GENE 324 347983 - 348723 767 246 aa, chain - ## HITS:1 COG:FN0807 KEGG:ns NR:ns ## COG: FN0807 COG1212 # Protein_GI_number: 19704142 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Fusobacterium nucleatum # 7 234 6 234 245 194 45.0 1e-49 MSKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDQRVEKAV QAFGGKAIMTRNDHESGTDRLVEVMHKVEADIYINLQGDEPMIRPRDVDTLLQGMRDDPA LPVATLCHAISAEEATEPSTVKVVVNTHQDALYFSRSPIPYPRNAEKARYLKHVGIYAYR RDVLQNYSQLPESMPEQAESLEQLRLMSAGINIRTFEVAATGPGVDTPACLEKVRALMAQ ELAENA >gi|296918697|gb|GG773003.1| GENE 325 348733 - 350409 1529 558 aa, chain - ## HITS:1 COG:Cj1444c KEGG:ns NR:ns ## COG: Cj1444c COG1596 # Protein_GI_number: 15792762 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Campylobacter jejuni # 68 558 61 552 552 342 38.0 2e-93 MKLFKSILLIAACHAAQASAAIDINADPNLTGAAPLTGILNGQQSDTQNMSGFDNTPPPS PPVVMSRMFGAQLFNGTSADSGATVGFNPDYILNPGDSIQVRLWGAFTFDGALQVDPKGN IFLPNVGPVKVAGVSNSQLNALVTSKVKEVYQSNVNVYASLLQAQPVKVYVTGFVRNPGL YGGVTSDSLLNYLIKAGGVDPERGSYVDIVVKRGNRVRSNVNLYDFLLNGKLGLSQFADG DTIIVGPRQHTFSVQGDVFNSYDFEFRESSIPVTEALSWARPKPGATHITIMRKQGLQKR SEYYPISSAPGRMLQNGDTLIVSTDRYAGTIQVRVEGAHSGEHAMVLPYGSTMRAVLEKV RPNSMSQMNAVQLYRPSVAQRQKEMLNLSLQKLEEASLSAQSSTKEEASLRMQEAQLISR FVAKARTVVPKGEVILNESNIDSVLLEDGDVINIPEKTSLVMVHGEVLFPNAVSWQKGMT TEDYIEKCGGLTQKSGNARIIVIRQNGAAVNAEDVDSLKPGDEIMVLPKYESKNIEVTRG ISTILYQLAVGAKVILSL >gi|296918697|gb|GG773003.1| GENE 326 350433 - 351581 1151 382 aa, chain - ## HITS:1 COG:Cj1445c KEGG:ns NR:ns ## COG: Cj1445c COG3524 # Protein_GI_number: 15792763 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsule polysaccharide export protein # Organism: Campylobacter jejuni # 37 381 27 371 372 203 34.0 4e-52 MLIKVKSAVSWMRARLSAISLADIQKHLAKIIILAPMAMLLIYLAIFSQPRYMSESKVAI KRSDDLNSGSLNFGLLLGASNPSSAEDALYLKEYINSPDMLAALDKQLNFREAFSHSGLD FLNHLSKDETAEGFLKYYKDRINVSYDDKTGLLNIQTQGFSPEFALKFNQTVLKESERFI NEMSHRIARDQLAFAETEMEKARQRLDASKAELLSYQDNNNVLDPQAQAQAASTLVNTLM GQKIQMEADLRNLLTYLREDAPQVVSARNAIQSLQAQIDEEQSKITAPQGDKLNRMAVDF EEIKSKVEFNTELYKLTLTSIEKTRVEAARKLKVLSVISSPQLPQESSFPNIPYLIACWL LVCCLLFGTLKLLLAVIEDHRD >gi|296918697|gb|GG773003.1| GENE 327 351653 - 352636 831 327 aa, chain - ## HITS:1 COG:PM0525_1 KEGG:ns NR:ns ## COG: PM0525_1 COG0794 # Protein_GI_number: 15602390 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Pasteurella multocida # 23 218 43 237 238 257 62.0 2e-68 MSERHLPDDQSSTIDPYLITSVRQTLAEQGAALQNLSKQLDSGQYQRVLNLIMNCKGHVI LSGMGKSGHVGRKMSATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEIL KLVPSLKNFGNRIIAITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDA LAIAMIRQRKFMPNDFARYHPGGSLGRRLLTRVADVMQHDVPAVQLDASFKTVIQRITSG CQGMVMVEDAEGGLAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEE KMQKHRVSTLLVTNKANKVTGLVRIFD >gi|296918697|gb|GG773003.1| GENE 328 353446 - 353601 74 51 aa, chain - ## HITS:1 COG:no KEGG:ECED1_3592 NR:ns ## KEGG: ECED1_3592 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 51 1 51 51 84 98.0 2e-15 MAALVVTWFNPVIKAFYMHLSAAGKTKKMALVDCMRKLLTILNAMLRKNEE >gi|296918697|gb|GG773003.1| GENE 329 354018 - 355514 736 498 aa, chain - ## HITS:1 COG:ECs0363_2 KEGG:ns NR:ns ## COG: ECs0363_2 COG2200 # Protein_GI_number: 15829617 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 247 492 17 262 263 313 58.0 4e-85 MVAGSLIFLFIILLTFFWKKAELVNDSQIRVNFALGYIENILNQNNSISQEAEHLLLNNC NADTQHELSNLLLKRPQLRALSLARQEAVFCSTHPGLPVGPVAEKEQWRHDMLIRFPEDT GTLPWILLRTPYKNGTVITATDYYFIQDIISVVHAVPAIRFRLGNTVLSASGKNVTLLPD DSGIQKESHSKKYPFSLIYIIPVKMQLTYAWKQAWYMIPVAIFGGILTAFLLSRRRPSSP LDMLKNALAHGEFRPYFQPIISAKNHQLTGCEVLIRWHHPVSGIIPPDQFIPLAESTGLI APITQQLMSQVEHSLNSVAHFLPNQFHIGINISPAHFLSPGLEDSCMKFLSTFPKGKVKL VLELTERNQLSVTAESKALFAKLHQQGVLFALDDFGTGYATHSYLQSFPVDYIKLDKGFV QMVGVDEISGHIVENVIELARRLGIDIIAEVIETESQELFMTEKGSCYLQGYRYAPPLPA EQFIAEWVYNSGNGKNQR >gi|296918697|gb|GG773003.1| GENE 330 355624 - 356469 321 281 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3318 NR:ns ## KEGG: ECS88_3318 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 281 1 281 281 593 100.0 1e-168 MSDITISRPEVVTGHTDVICSTSIRHVVTVRNAALQQTETLIRQLAEISVLTAGIGGKTA LDWAMKQNFRCGCWLMEKPEAAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSL EYDNFPEISEANILSTFEQLHQNIDEVFERGVINVFRGLNWNYKTNCPCKFGSKIIVNNL VRWDRWGFHLITGQQADRLADLERMLYLFSGKPIPDNRENITIHLDDHIHSVQGKACYED EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKYYPETLSPV >gi|296918697|gb|GG773003.1| GENE 331 356592 - 356789 145 65 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3317 NR:ns ## KEGG: ECS88_3317 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 65 16 80 80 120 100.0 2e-26 MKSLTTETALDILIAWLQDNIDCESGIIFDNDEDKTDSAALLPCIEQAREDVRAVRHLQL LHQNR >gi|296918697|gb|GG773003.1| GENE 332 356801 - 357235 137 144 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3316 NR:ns ## KEGG: ECS88_3316 # Name: yeeW # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 144 19 162 162 292 100.0 4e-78 MGRIVVDVDGVNLSELINKVSENGYLLRVVDKSDQHATSTPPPLTTLTCIRCSTAHITET DNAWLYSLSHQTNDDGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRCLVVTLTR RYGVSLIHLDASAECLPGLPTFNW >gi|296918697|gb|GG773003.1| GENE 333 357317 - 357694 251 125 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3315 NR:ns ## KEGG: ECS88_3315 # Name: yeeV # Def: toxin of the YeeV-YeeU toxin-antitoxin system # Organism: E.coli_S88 # Pathway: not_defined # 1 125 39 163 163 258 100.0 5e-68 MNTLPDTHVREASGCPSPVTIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC DAVNFLVEKYALVRTDQPGFSAGAPSQLINSIDILRARRATGLMTRNNYRMVNNITQGKH PEAKQ >gi|296918697|gb|GG773003.1| GENE 334 357741 - 358178 225 145 aa, chain - ## HITS:1 COG:no KEGG:APECO1_3487 NR:ns ## KEGG: APECO1_3487 # Name: yeeU # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 145 1 145 145 301 100.0 7e-81 MSRIIATIEPFLTDFCEDFIVSDTLPGTTHPDDNHDRPWWGLPCTVTPCFGARLVQEGNR LHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTITLYAKGLTCE ADTLGSCGYVYLAVYPTPAAPAITV >gi|296918697|gb|GG773003.1| GENE 335 358197 - 358418 324 73 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3313 NR:ns ## KEGG: ECS88_3313 # Name: yeeT # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 73 1 73 73 150 100.0 2e-35 MKIITRGEAMRIHQQHPASRLFPFCTGKYRWHGSTEAYTGREVQDIPGVLAVFAERRKDS FGPYVRLMSVTLN >gi|296918697|gb|GG773003.1| GENE 336 358487 - 358693 62 68 aa, chain - ## HITS:1 COG:ECs2803 KEGG:ns NR:ns ## COG: ECs2803 COG2003 # Protein_GI_number: 15832057 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli O157:H7 # 1 68 91 158 158 129 97.0 1e-30 MIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGSQVF SFAEHGLL Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:50:13 2011 Seq name: gi|296918696|gb|GG773004.1| Escherichia coli MS 110-3 genomic scaffold Scfld152, whole genome shotgun sequence Length of sequence - 139373 bp Number of predicted genes - 150, with homology - 150 Number of transcription units - 92, operones - 32 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 1263 - 1322 3.1 2 2 Tu 1 . + CDS 1348 - 1758 134 ## COG5562 Phage envelope protein + Term 1817 - 1853 1.7 3 3 Op 1 . - CDS 2066 - 2530 356 ## ECS88_1359 murein endopeptidase; DLP12 prophage 4 3 Op 2 . - CDS 2532 - 2669 67 ## ECO111_2029 hypothetical protein - Term 2690 - 2740 8.2 5 4 Tu 1 . - CDS 2829 - 3362 259 ## COG3772 Phage-related lysozyme (muraminidase) + Prom 3354 - 3413 1.8 6 5 Tu 1 . + CDS 3468 - 3740 166 ## ECS88_1355 hypothetical protein + Term 3783 - 3817 3.2 7 6 Op 1 . - CDS 3706 - 4050 406 ## APECO1_390 hypothetical protein 8 6 Op 2 . - CDS 4055 - 4270 288 ## ECSP_1747 lysis protein - Prom 4430 - 4489 4.0 - Term 4298 - 4336 5.3 9 7 Tu 1 . - CDS 4539 - 4766 150 ## COG2801 Transposase and inactivated derivatives - TRNA 5792 - 5868 86.1 # Arg TCT 0 0 - TRNA 5966 - 6041 88.5 # Met CAT 0 0 10 8 Tu 1 . - CDS 6091 - 7140 642 ## COG0863 DNA modification methylase - Prom 7219 - 7278 20.8 11 9 Tu 1 . - CDS 7327 - 7524 136 ## ECO26_1481 hypothetical protein - Prom 7659 - 7718 2.1 - Term 7667 - 7712 6.2 12 10 Op 1 . - CDS 7749 - 8570 312 ## ECS88_1348 antitermination protein Q of prophage 13 10 Op 2 . - CDS 8567 - 8941 245 ## COG4570 Holliday junction resolvase 14 10 Op 3 . - CDS 8954 - 9928 484 ## ECS88_1345 hypothetical protein - Term 10347 - 10382 1.1 15 11 Tu 1 . - CDS 10457 - 10669 205 ## UTI89_C1474 putative cryptic prophage CP-933M cell killing protein 16 12 Op 1 . - CDS 11230 - 12231 142 ## ECS88_1342 hypothetical protein 17 12 Op 2 . - CDS 12247 - 13269 417 ## ECS88_1341 hypothetical protein - Prom 13361 - 13420 2.2 18 13 Op 1 . - CDS 13864 - 14934 236 ## APECO1_379 hypothetical protein 19 13 Op 2 . - CDS 15006 - 15431 231 ## ECS88_1338 hypothetical protein 20 13 Op 3 . - CDS 15415 - 15657 195 ## ECS88_1337 hypothetical protein - Prom 15679 - 15738 4.9 21 14 Tu 1 . + CDS 16136 - 16387 136 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Prom 16448 - 16507 7.3 22 15 Op 1 . + CDS 16599 - 16835 186 ## ECS88_1335 hypothetical protein 23 15 Op 2 . + CDS 16795 - 16965 200 ## ECUMN_1857 hypothetical protein 24 15 Op 3 . + CDS 16995 - 17216 212 ## ECS88_1333 hypothetical protein - Term 16999 - 17045 -1.0 25 16 Tu 1 . - CDS 17217 - 17381 98 ## ECSP_1720 hypothetical protein - Prom 17500 - 17559 1.9 + Prom 17565 - 17624 3.1 26 17 Op 1 . + CDS 17782 - 17970 183 ## ECSP_2138 putative inhibitor of cell division encoded by cryptic prophage CP-933P 27 17 Op 2 . + CDS 17967 - 18158 143 ## UTI89_C1460 hypothetical protein 28 17 Op 3 . + CDS 18251 - 20722 1494 ## ECS88_1329 exonuclease from phage origin + Prom 20835 - 20894 1.8 29 18 Tu 1 . + CDS 21013 - 22143 432 ## COG0582 Integrase + Term 22153 - 22185 -0.8 - Term 22119 - 22150 3.1 30 19 Tu 1 . - CDS 22189 - 22827 610 ## COG3047 Outer membrane protein W - Prom 22856 - 22915 7.9 + Prom 22934 - 22993 6.5 31 20 Op 1 . + CDS 23183 - 23926 575 ## ECUMN_1554 hypothetical protein 32 20 Op 2 9/0.000 + CDS 23956 - 24495 572 ## COG2917 Intracellular septation protein A + Term 24497 - 24539 6.8 + Prom 24513 - 24572 2.1 33 20 Op 3 . + CDS 24601 - 24999 377 ## COG1607 Acyl-CoA hydrolase + Term 25003 - 25042 9.3 - Term 24991 - 25030 9.3 34 21 Tu 1 . - CDS 25039 - 25755 507 ## COG0810 Periplasmic protein TonB, links inner and outer membranes - Prom 25787 - 25846 5.6 + Prom 25715 - 25774 2.3 35 22 Tu 1 . + CDS 25883 - 26275 303 ## COG2350 Uncharacterized protein conserved in bacteria + Term 26284 - 26340 5.1 + Prom 26468 - 26527 4.2 36 23 Tu 1 . + CDS 26557 - 27828 772 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component + Term 27853 - 27893 8.1 - Term 27841 - 27879 3.1 37 24 Tu 1 . - CDS 27883 - 28056 81 ## ECUMN_1547 hypothetical protein - Prom 28081 - 28140 6.3 + Prom 28112 - 28171 7.8 38 25 Op 1 1/0.826 + CDS 28199 - 29659 1190 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 39 25 Op 2 . + CDS 29694 - 30023 494 ## COG3099 Uncharacterized protein conserved in bacteria + Term 30047 - 30078 4.1 - Term 30035 - 30066 4.1 40 26 Op 1 44/0.000 - CDS 30076 - 31080 850 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 41 26 Op 2 44/0.000 - CDS 31077 - 32090 582 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 42 26 Op 3 49/0.000 - CDS 32102 - 33010 992 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 43 26 Op 4 21/0.000 - CDS 33025 - 33945 758 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Term 33975 - 34027 11.1 44 26 Op 5 . - CDS 34031 - 35662 1688 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 35793 - 35852 4.2 + Prom 35949 - 36008 2.4 45 27 Tu 1 . + CDS 36081 - 36242 153 ## ECS88_1310 hypothetical protein + Term 36366 - 36395 0.4 - Term 36349 - 36387 4.6 46 28 Tu 1 . - CDS 36400 - 37047 456 ## COG2095 Multiple antibiotic transporter - Prom 37235 - 37294 6.3 47 29 Tu 1 . + CDS 37524 - 40199 2898 ## COG1454 Alcohol dehydrogenase, class IV + Prom 40252 - 40311 27.5 48 30 Tu 1 . + CDS 40353 - 41390 580 ## COG3385 FOG: Transposase and inactivated derivatives - Term 41647 - 41695 8.1 49 31 Tu 1 . - CDS 41710 - 42327 318 ## COG1435 Thymidine kinase - Prom 42361 - 42420 5.6 + Prom 42836 - 42895 4.5 50 32 Tu 1 . + CDS 42931 - 43344 552 ## COG2916 DNA-binding protein H-NS + Term 43447 - 43480 -0.4 - Term 43431 - 43472 8.8 51 33 Tu 1 . - CDS 43495 - 44403 972 ## COG1210 UDP-glucose pyrophosphorylase - Prom 44540 - 44599 4.9 - Term 44530 - 44562 -0.6 52 34 Op 1 4/0.478 - CDS 44605 - 45618 618 ## COG0784 FOG: CheY-like receiver - Term 45637 - 45666 -0.3 53 34 Op 2 . - CDS 45710 - 46615 377 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 46637 - 46696 1.9 + Prom 46624 - 46683 3.8 54 35 Op 1 4/0.478 + CDS 46728 - 47186 205 ## PROTEIN SUPPORTED gi|90021194|ref|YP_527021.1| ribosomal protein L20 55 35 Op 2 . + CDS 47236 - 48078 891 ## COG0788 Formyltetrahydrofolate hydrolase + TRNA 48238 - 48322 66.9 # Tyr GTA 0 0 + TRNA 48356 - 48440 66.9 # Tyr GTA 0 0 + Prom 48643 - 48702 2.5 56 36 Tu 1 . + CDS 48871 - 50070 195 ## ECS88_1298 transposase - Term 49984 - 50017 4.2 57 37 Op 1 12/0.000 - CDS 50123 - 50800 868 ## COG2181 Nitrate reductase gamma subunit 58 37 Op 2 12/0.000 - CDS 50800 - 51510 833 ## COG2180 Nitrate reductase delta subunit 59 37 Op 3 13/0.000 - CDS 51507 - 53045 1741 ## COG1140 Nitrate reductase beta subunit 60 37 Op 4 10/0.000 - CDS 53042 - 56785 4503 ## COG5013 Nitrate reductase alpha subunit - Prom 56973 - 57032 7.3 - Term 57124 - 57154 3.4 61 38 Op 1 . - CDS 57178 - 58569 1156 ## COG2223 Nitrate/nitrite transporter - Prom 58595 - 58654 1.8 62 38 Op 2 . - CDS 58664 - 58882 134 ## ECS88_1292 hypothetical protein - Prom 59120 - 59179 3.2 + Prom 58689 - 58748 8.3 63 39 Op 1 8/0.000 + CDS 58908 - 60704 1375 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific 64 39 Op 2 . + CDS 60697 - 61347 820 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Term 61206 - 61245 0.8 65 40 Tu 1 . - CDS 61348 - 62742 858 ## UTI89_C1416 hypothetical protein - Prom 62779 - 62838 3.0 + Prom 62834 - 62893 2.7 66 41 Tu 1 . + CDS 62927 - 63280 368 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction + Term 63283 - 63328 2.8 67 42 Tu 1 . - CDS 63324 - 63998 548 ## COG3703 Uncharacterized protein involved in cation transport - Prom 64082 - 64141 2.9 68 43 Tu 1 . - CDS 64177 - 64407 265 ## COG4572 Putative cation transport regulator - Prom 64522 - 64581 5.4 + Prom 64571 - 64630 4.8 69 44 Tu 1 . + CDS 64677 - 65777 1137 ## COG0387 Ca2+/H+ antiporter + Term 65781 - 65835 7.8 70 45 Tu 1 . + CDS 66156 - 66290 141 ## SBO_1851 hypothetical protein - Term 66405 - 66441 4.1 71 46 Op 1 8/0.000 - CDS 66463 - 67317 978 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 72 46 Op 2 6/0.087 - CDS 67353 - 68162 799 ## COG2912 Uncharacterized conserved protein 73 46 Op 3 6/0.087 - CDS 68166 - 68540 375 ## COG3094 Uncharacterized protein conserved in bacteria 74 46 Op 4 32/0.000 - CDS 68555 - 69388 484 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 75 46 Op 5 9/0.000 - CDS 69388 - 70470 1223 ## COG0216 Protein chain release factor A 76 46 Op 6 . - CDS 70512 - 71768 1250 ## COG0373 Glutamyl-tRNA reductase - Prom 71807 - 71866 4.0 + Prom 71782 - 71841 6.0 77 47 Op 1 13/0.000 + CDS 71916 - 72605 593 ## COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis 78 47 Op 2 13/0.000 + CDS 72605 - 73456 641 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase + Term 73476 - 73502 0.3 79 47 Op 3 3/0.478 + CDS 73541 - 74554 1029 ## COG0462 Phosphoribosylpyrophosphate synthetase + Term 74567 - 74606 4.1 80 48 Tu 1 . + CDS 74706 - 76358 1793 ## COG0659 Sulfate permease and related transporters (MFS superfamily) 81 49 Tu 1 . - CDS 76413 - 76691 300 ## ECO111_1534 hypothetical protein - Prom 76744 - 76803 3.8 + Prom 76880 - 76939 4.2 82 50 Op 1 14/0.000 + CDS 76969 - 77553 502 ## COG0193 Peptidyl-tRNA hydrolase + Term 77565 - 77597 0.7 + Prom 77578 - 77637 2.4 83 50 Op 2 . + CDS 77670 - 78761 1359 ## COG0012 Predicted GTPase, probable translation factor + Term 78791 - 78833 8.8 + Prom 78799 - 78858 1.8 84 51 Tu 1 . + CDS 78897 - 79127 145 ## ECS88_1270 hypothetical protein 85 52 Tu 1 . - CDS 79165 - 81084 1462 ## COG3284 Transcriptional activator of acetoin/glycerol metabolism - Prom 81117 - 81176 6.2 + Prom 81159 - 81218 4.9 86 53 Op 1 10/0.000 + CDS 81312 - 82382 1049 ## COG2376 Dihydroxyacetone kinase 87 53 Op 2 2/0.696 + CDS 82393 - 83025 550 ## COG2376 Dihydroxyacetone kinase 88 53 Op 3 . + CDS 83036 - 84454 1138 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 84463 - 84504 9.2 - Term 84417 - 84461 1.1 89 54 Tu 1 . - CDS 84613 - 84828 104 ## UTI89_C1390 hypothetical protein - Prom 84889 - 84948 3.9 + Prom 84627 - 84686 4.3 90 55 Tu 1 . + CDS 84773 - 86470 1616 ## COG1626 Neutral trehalase + Term 86485 - 86533 6.6 + Prom 86591 - 86650 8.8 91 56 Op 1 33/0.000 + CDS 86807 - 87829 505 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 92 56 Op 2 35/0.000 + CDS 87829 - 88809 715 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 93 56 Op 3 8/0.000 + CDS 88806 - 89564 245 ## PROTEIN SUPPORTED gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 94 56 Op 4 3/0.478 + CDS 89574 - 90386 679 ## COG0500 SAM-dependent methyltransferases 95 56 Op 5 2/0.696 + CDS 90383 - 91237 565 ## COG0157 Nicotinate-nucleotide pyrophosphorylase 96 56 Op 6 . + CDS 91263 - 93233 2008 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Term 93229 - 93270 6.2 97 57 Tu 1 . - CDS 93292 - 93537 268 ## COG2261 Predicted membrane protein - Prom 93587 - 93646 3.0 98 58 Tu 1 . + CDS 93738 - 94472 689 ## COG5581 Predicted glycosyltransferase - Term 94311 - 94354 1.7 99 59 Op 1 . - CDS 94474 - 95085 614 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 100 59 Op 2 . - CDS 95024 - 95212 59 ## gi|293409572|ref|ZP_06653148.1| predicted protein + Prom 95098 - 95157 2.6 101 60 Op 1 1/0.826 + CDS 95185 - 96099 801 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF + Term 96134 - 96167 -0.4 + Prom 96113 - 96172 1.7 102 60 Op 2 . + CDS 96194 - 97930 1793 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 103 61 Op 1 7/0.043 - CDS 97987 - 99057 904 ## COG0787 Alanine racemase 104 61 Op 2 . - CDS 99067 - 100365 1427 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 100411 - 100470 5.8 + Prom 100391 - 100450 3.8 105 62 Tu 1 . + CDS 100695 - 102227 1471 ## COG2719 Uncharacterized conserved protein + Term 102231 - 102265 5.6 - Term 102219 - 102252 5.4 106 63 Tu 1 . - CDS 102390 - 103109 780 ## COG2186 Transcriptional regulators - Prom 103142 - 103201 4.7 + Prom 103224 - 103283 5.5 107 64 Tu 1 . + CDS 103331 - 104872 1685 ## COG3067 Na+/H+ antiporter + Term 104883 - 104914 4.1 + Prom 104879 - 104938 4.2 108 65 Tu 1 . + CDS 105018 - 105548 560 ## COG1495 Disulfide bond formation protein DsbB + Term 105557 - 105587 3.0 109 66 Op 1 4/0.478 - CDS 105593 - 106861 428 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 110 66 Op 2 . - CDS 106861 - 107280 297 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 107307 - 107366 7.7 111 67 Tu 1 . - CDS 108074 - 108520 472 ## COG2983 Uncharacterized conserved protein - Prom 108547 - 108606 8.1 112 68 Op 1 2/0.696 - CDS 108639 - 109298 637 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 113 68 Op 2 . - CDS 109370 - 109663 275 ## COG3100 Uncharacterized protein conserved in bacteria - Prom 109855 - 109914 7.2 + Prom 109812 - 109871 4.5 114 69 Tu 1 . + CDS 109905 - 110306 293 ## ECSE_1225 hypothetical protein - Term 110302 - 110334 4.7 115 70 Tu 1 . - CDS 110426 - 110788 67 ## ECS88_1240 hypothetical protein - Prom 111012 - 111071 4.4 + Prom 111107 - 111166 4.5 116 71 Op 1 22/0.000 + CDS 111314 - 112009 508 ## COG0850 Septum formation inhibitor 117 71 Op 2 22/0.000 + CDS 112033 - 112845 832 ## COG2894 Septum formation inhibitor-activating ATPase 118 71 Op 3 . + CDS 112849 - 113115 463 ## COG0851 Septum formation topological specificity factor + Term 113141 - 113178 8.0 119 72 Tu 1 . - CDS 113488 - 113748 222 ## COG3468 Type V secretory pathway, adhesin AidA + Prom 114040 - 114099 5.7 120 73 Op 1 . + CDS 114232 - 114405 117 ## E2348C_1290 hypothetical protein 121 73 Op 2 . + CDS 114407 - 114751 358 ## EcSMS35_1978 hypothetical protein 122 73 Op 3 . + CDS 114761 - 115090 455 ## ECDH10B_1222 hypothetical protein + Term 115103 - 115170 30.0 - Term 115082 - 115152 12.2 123 74 Op 1 . - CDS 115181 - 115708 510 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 115785 - 115844 1.9 124 74 Op 2 . - CDS 115854 - 116165 214 ## COG3468 Type V secretory pathway, adhesin AidA + Prom 116161 - 116220 2.3 125 75 Tu 1 . + CDS 116299 - 116451 74 ## gi|315288537|gb|EFU47935.1| hypothetical protein HMPREF9539_01497 126 76 Tu 1 . - CDS 116519 - 116698 168 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 116795 - 116854 5.4 - Term 116823 - 116874 -0.5 127 77 Tu 1 . - CDS 117096 - 117314 79 ## ECP_1206 hypothetical protein - Prom 117343 - 117402 6.7 128 78 Tu 1 . - CDS 117446 - 118126 363 ## COG2200 FOG: EAL domain - Prom 118190 - 118249 5.0 - Term 118490 - 118520 -0.9 129 79 Tu 1 . - CDS 118637 - 118813 249 ## ECS88_1228 hypothetical protein - Prom 118936 - 118995 5.2 130 80 Tu 1 . - CDS 118998 - 119264 223 ## ECS88_1227 hypothetical protein - Prom 119284 - 119343 3.7 - Term 119460 - 119502 2.4 131 81 Tu 1 . - CDS 119608 - 119844 218 ## ECS88_1225 hypothetical protein - Prom 119865 - 119924 3.9 + Prom 119926 - 119985 4.8 132 82 Tu 1 . + CDS 120158 - 121369 555 ## COG2200 FOG: EAL domain + Term 121379 - 121437 1.2 + Prom 121448 - 121507 7.3 133 83 Tu 1 . + CDS 121574 - 122305 369 ## COG0789 Predicted transcriptional regulators + Prom 122337 - 122396 3.3 134 84 Tu 1 . + CDS 122526 - 122930 106 ## COG5562 Phage envelope protein + Term 123105 - 123144 1.2 135 85 Tu 1 . - CDS 123778 - 124164 282 ## ECUMN_1442 hypothetical protein - Prom 124251 - 124310 2.8 + Prom 125130 - 125189 6.3 136 86 Op 1 25/0.000 + CDS 125235 - 126149 764 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 137 86 Op 2 42/0.000 + CDS 126152 - 126976 237 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 138 86 Op 3 10/0.000 + CDS 126973 - 127830 781 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 139 86 Op 4 . + CDS 127827 - 128684 414 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 140 87 Op 1 . - CDS 128776 - 129069 228 ## ECUMN_1437 hypothetical protein 141 87 Op 2 . - CDS 129082 - 129360 328 ## ECS88_1212 hypothetical protein 142 87 Op 3 . - CDS 129357 - 131417 787 ## ECS88_1211 side tail fiber protein homolog from lambdoid prophage - Prom 131437 - 131496 3.3 - Term 131428 - 131454 -1.0 143 88 Tu 1 . - CDS 131498 - 132313 434 ## COG4733 Phage-related protein, tail component - Term 132677 - 132732 6.2 144 89 Op 1 . - CDS 132743 - 133327 322 ## COG5525 Bacteriophage tail assembly protein 145 89 Op 2 . - CDS 133327 - 135069 673 ## COG5301 Phage-related tail fibre protein + Prom 134981 - 135040 2.2 146 90 Tu 1 . + CDS 135200 - 135937 473 ## ECH74115_1641 hypothetical protein + Term 136018 - 136057 4.3 - Term 136441 - 136482 7.7 147 91 Op 1 2/0.696 - CDS 136586 - 137185 455 ## COG3637 Opacity protein and related surface antigens - Term 137203 - 137233 3.0 148 91 Op 2 1/0.826 - CDS 137253 - 137906 375 ## COG4733 Phage-related protein, tail component 149 91 Op 3 1/0.826 - CDS 137942 - 138391 160 ## COG4733 Phage-related protein, tail component 150 92 Tu 1 . - CDS 138841 - 139320 424 ## COG4733 Phage-related protein, tail component Predicted protein(s) >gi|296918696|gb|GG773004.1| GENE 1 121 - 669 484 182 aa, chain - ## HITS:1 COG:STM2609 KEGG:ns NR:ns ## COG: STM2609 COG4220 # Protein_GI_number: 16765930 # Func_class: L Replication, recombination and repair # Function: Phage DNA packaging protein, Nu1 subunit of terminase # Organism: Salmonella typhimurium LT2 # 1 164 1 164 164 234 75.0 4e-62 MKVNKKRLAEIFNVDPRTIERWQSQGLPCVSKGSKGIESVFDTAMAIQWYAQRETDIENE KLRKELADLRAAAESDLQPGTIDYERYRLTKAQADAQELKNAREDGVVLETELFTFILQR VAQEISGILVRVPLTLQRKYPDISPSHLDVVKTEIAKASNVAAKAGENVGGWIDDFRRAE GS >gi|296918696|gb|GG773004.1| GENE 2 1348 - 1758 134 136 aa, chain + ## HITS:1 COG:ybcV KEGG:ns NR:ns ## COG: ybcV COG5562 # Protein_GI_number: 16128541 # Func_class: R General function prediction only # Function: Phage envelope protein # Organism: Escherichia coli K12 # 1 135 15 149 150 192 77.0 1e-49 MAQIAIFKQIFDKVRNNLNYHWFYSELKRHNVSHYIYYLATENIHLVLENDNTVLIKGQG KVVNVRFSKNKCLIEATLKGFKSGELSFYEYRKNLATAGVFRWITNIHENKRYYYTFDNS LLFTENIQNTTQIFPH >gi|296918696|gb|GG773004.1| GENE 3 2066 - 2530 356 154 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1359 NR:ns ## KEGG: ECS88_1359 # Name: rzpD # Def: murein endopeptidase; DLP12 prophage # Organism: E.coli_S88 # Pathway: not_defined # 1 154 1 154 154 251 100.0 8e-66 MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKNVRELKLANAAITDMQMRQRD VAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLA DTAERDYFTLRARLIIMQKQLEGAQLYIREQCLR >gi|296918696|gb|GG773004.1| GENE 4 2532 - 2669 67 45 aa, chain - ## HITS:1 COG:no KEGG:ECO111_2029 NR:ns ## KEGG: ECO111_2029 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 45 28 72 72 71 93.0 1e-11 MFDFSKLIREIRVMAEKLSTWKFILIWLVFVIMASGYFIGQIRWW >gi|296918696|gb|GG773004.1| GENE 5 2829 - 3362 259 177 aa, chain - ## HITS:1 COG:ECs2741 KEGG:ns NR:ns ## COG: ECs2741 COG3772 # Protein_GI_number: 15831995 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Escherichia coli O157:H7 # 1 177 1 177 177 342 93.0 1e-94 MNAKIKYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTTAYRDGSGNWTICRGATMVDG KPVFPGMKLSKEKCDQVNAIERDKALAWVEKNIKVPLSEPQKAGIASFCPYNIGPGKCFP STFYKRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR >gi|296918696|gb|GG773004.1| GENE 6 3468 - 3740 166 90 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1355 NR:ns ## KEGG: ECS88_1355 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 90 1 90 90 160 100.0 2e-38 MDNSTISLQELLDCISRLRDDVNALTVAFSHLALSIPREQMLPTLASIHFESRNPKWSQE QQNSFKWLAALLEENYAGKTTISAESSGNQ >gi|296918696|gb|GG773004.1| GENE 7 3706 - 4050 406 114 aa, chain - ## HITS:1 COG:no KEGG:APECO1_390 NR:ns ## KEGG: APECO1_390 # Name: ydfR # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 114 1 114 114 228 100.0 6e-59 MTQNYELIVKGIRNFENKVTVTLALQDKERFDGEIFDLDISLDRVEGAALEFYEAAARRS IRQVFLDVAAGLCEGDEQSPEKRPVILEAQNVWITYKGKLPGRITGSLKTPPKW >gi|296918696|gb|GG773004.1| GENE 8 4055 - 4270 288 71 aa, chain - ## HITS:1 COG:no KEGG:ECSP_1747 NR:ns ## KEGG: ECSP_1747 # Name: not_defined # Def: lysis protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 71 26 96 96 139 98.0 3e-32 MDQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTNLYFKI REDRRKAARGE >gi|296918696|gb|GG773004.1| GENE 9 4539 - 4766 150 75 aa, chain - ## HITS:1 COG:ECs1781 KEGG:ns NR:ns ## COG: ECs1781 COG2801 # Protein_GI_number: 15831035 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 73 1 73 617 134 87.0 3e-32 MAFKHYDVVRAVSPSDLAKRLTQKLKEGWQPFGSPVAITPYTLMQAIAAEGDVVVSGATE PDWYYVIVLARHSRP >gi|296918696|gb|GG773004.1| GENE 10 6091 - 7140 642 349 aa, chain - ## HITS:1 COG:ECs1780 KEGG:ns NR:ns ## COG: ECs1780 COG0863 # Protein_GI_number: 15831034 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Escherichia coli O157:H7 # 1 349 1 349 352 696 94.0 0 MLNTVKISSCELINADCLEFIRSLPENSVDLIVTDPPYFKVKPEGWDNQWKGDDDYLKWL DQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESL RAYFPATERILFAEHYQGPYRPKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQI ADATGKKNMVSHWFSASQWQLPNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTS LNRQYAELLSEYKHLRRYFGVTVQVPYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISASS RPGDLVADFFMGSGSTVKAAMALGRRAIGVELETGRFEQTVREVQDLIV >gi|296918696|gb|GG773004.1| GENE 11 7327 - 7524 136 65 aa, chain - ## HITS:1 COG:no KEGG:ECO26_1481 NR:ns ## KEGG: ECO26_1481 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 65 42 106 106 123 98.0 2e-27 MLKQQDMTETARVVFNELSVTDPATVGEIAQNTYLSRERCQLILTQLVMAGLADYQFGCY RRLPQ >gi|296918696|gb|GG773004.1| GENE 12 7749 - 8570 312 273 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1348 NR:ns ## KEGG: ECS88_1348 # Name: not_defined # Def: antitermination protein Q of prophage # Organism: E.coli_S88 # Pathway: not_defined # 1 273 1 273 273 533 100.0 1e-150 MKLEDLPKYYSPKSPGLTDASASTSKDALSITDVMAAQGMTQNRAEMGFSAFLGKMGISM NDRARATELLADYALSRCDRVAALRKLPAEIKPVVMRIMASYAFEDYARSAASKKQCPCC HGKKFIESEVFTNKIQYPDGKPPVWAKCTKGVYPSYWEEWKKVREVVKVACPECGGKGEV STACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGCERLPSTEAFNAICKVTSAITLD TWKKSVKRFYDTLVVRFDIEEAWAERQLKRVTR >gi|296918696|gb|GG773004.1| GENE 13 8567 - 8941 245 124 aa, chain - ## HITS:1 COG:ECs1523 KEGG:ns NR:ns ## COG: ECs1523 COG4570 # Protein_GI_number: 15830777 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 124 1 124 124 210 88.0 6e-55 MLIDLVLPYPPTVNTYWRRRGSTYFISEEGKRYRRAVALIVRQQRLKLSLSGRLAIKVIA EPPDKRRRDLDNILKAPLDALTHAGVLMDDEQFDEINIVRGQPVSGGRMGVKIYPIMHEE QVKK >gi|296918696|gb|GG773004.1| GENE 14 8954 - 9928 484 324 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1345 NR:ns ## KEGG: ECS88_1345 # Name: ydfU # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 324 25 348 348 661 100.0 0 MPVFHNTRVLVEPEPKSMRNLPSGVVPAVRQPLVEDKTLLPFFSNARVIRAAGGAGALSD WLLRHIKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAW MIDVILHAMNGSQERELSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDI VPGEQTATSILKQRTKNLAPLPHAHQQNPPQEETVVSIAVDPESPESFMKRPKRRRWVNE KYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKSHDIFTLPLCREHHNELHADPLAFE EKHGSQVDLIFRFLDHAFATGVLG >gi|296918696|gb|GG773004.1| GENE 15 10457 - 10669 205 70 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C1474 NR:ns ## KEGG: UTI89_C1474 # Name: not_defined # Def: putative cryptic prophage CP-933M cell killing protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 70 1 70 70 114 100.0 1e-24 MNGKSRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEV AVFTVYEPEE >gi|296918696|gb|GG773004.1| GENE 16 11230 - 12231 142 333 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1342 NR:ns ## KEGG: ECS88_1342 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 333 1 333 333 699 100.0 0 MDIRTRKTKFLESLDSTEVIRKAVSLAIDCIIDNHNSNEDTPLVITSYDDLCRIQVLNYV QEFCEAAFPDMDEYYFSPNILRINGKTSEEACINLIKLLRSTKGMLFWSDAPSWFASLPD GLFHVVNIDQKIVTRGLNKKNSKPTIINKDYSVDTLLSELFLNGAHMEQPNVHNVSEGNM KFYDECHAGLIRPIPAPIGASYDEEITINSPDWQKLACVALRRYQSKECHDGMQWDTTDH GWTDVIAYPFVEEIQSMDNSGYRQCLVGLVTINNSNANSPYLSTVWIHPFYRRRGLLSKL WPKLQELYGSNFEIERPNENMKAFLKSAKHADY >gi|296918696|gb|GG773004.1| GENE 17 12247 - 13269 417 340 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1341 NR:ns ## KEGG: ECS88_1341 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 340 31 370 370 650 100.0 0 MPCISLWYNSCAIDTRERYIVKIVFEVNGKKVPLKSLKYISKKDQLEVMKNWFFENFEDP ANACPYESREGGYAYIYGGPYDASEELQSIFGQYVKSEYIEELVDELQTQCFDWSGNSNN IDDWYDDDIYDAVTSSGNPYLKFIDNIDKIKKLAKDKTEQQQKNHLLSLLYTNVITALET LYVELFINSIEKDDVYIANCIEKGKTEFKVSKDIAALPFKGEPIEKIRGELIRSIKEHLI SASWHSTKKVIDRYEATFDIKVQKDCPIEAIELATLNRNHLVHRGGKDKEGNLVVITDQD LETLIENASNLAIMLYNSLNVATNKTTILQPDDKPFIHEF >gi|296918696|gb|GG773004.1| GENE 18 13864 - 14934 236 356 aa, chain - ## HITS:1 COG:no KEGG:APECO1_379 NR:ns ## KEGG: APECO1_379 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 356 1 352 352 660 98.0 0 MANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSASRNVTRGHIDVTTEDLA SALDVTEEVIDSILQTMQGRVLDGDLITGWEKRQVLKEDNGNISQTAKSPAERKRAQRER ERKREQNGDCHGASRNVTHMSRRVTTDKDTDKDTDQEDQNTMVHGVKNATNQAGDVQTVN LGQPAGTTPEADSAYALKADSGAVQQVMTARPEQSHQLQQPEADSAIQREADRVVPENTG QSVGRVDYPDVFEQVWREYPLRAGANPKKSAFSAWKARLREGVPPEAMLDGVRRYARYLA ATGKTGTEFVQRATTFFGPDRNFENPWLLPVSGTNNQRCVNHISEPDNEIPPGFRG >gi|296918696|gb|GG773004.1| GENE 19 15006 - 15431 231 141 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1338 NR:ns ## KEGG: ECS88_1338 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 141 25 165 165 279 100.0 2e-74 MKIKHEHIRMAMNAWARPDGEKVPAAGITQAYFELGMTFPELYDDSHPEALARNTQKIFR WIEKDTPDAVEKIQALLPAIEKAMPPLLVARMRSHSSAYFRELVETRERLVRDADDFVAV AIAGFNQMNRGGPAGNAVAVH >gi|296918696|gb|GG773004.1| GENE 20 15415 - 15657 195 80 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1337 NR:ns ## KEGG: ECS88_1337 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 80 17 96 96 154 100.0 1e-36 MKKSEVLGYFGGVVKTAAALGTSKTTVSMWGEEVPWKWALLIQAVTAGALKYELHIPTVV IPGSDHNPPSNQGGIHENQA >gi|296918696|gb|GG773004.1| GENE 21 16136 - 16387 136 83 aa, chain + ## HITS:1 COG:Z2090 KEGG:ns NR:ns ## COG: Z2090 COG1974 # Protein_GI_number: 15801531 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 EDL933 # 1 83 130 212 212 156 97.0 9e-39 MSTSGGGVSIPNGSTVFVDPDRTVQPGNIVLALPKGTTTPVIRKLEIEGPDILLVPTNPR YPSIMLDDLSCILGVCFKIQQNI >gi|296918696|gb|GG773004.1| GENE 22 16599 - 16835 186 78 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1335 NR:ns ## KEGG: ECS88_1335 # Name: ydfA # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 78 1 78 78 139 100.0 3e-32 MTAGFNFNNYAAGFCSATPALRGNEVSMDTIDLGNSESLVCGVFPNQDGTFTAMTYTKSK TFKTENGARRWLERNSGE >gi|296918696|gb|GG773004.1| GENE 23 16795 - 16965 200 56 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1857 NR:ns ## KEGG: ECUMN_1857 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 55 1 55 205 99 89.0 3e-20 MVPVAGWKETQVSDMDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG >gi|296918696|gb|GG773004.1| GENE 24 16995 - 17216 212 73 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1333 NR:ns ## KEGG: ECS88_1333 # Name: ydfC # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 73 1 73 73 113 100.0 3e-24 MQKREPVIIAPDYTNDELYEWMRQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAA ALSIARMITYPRE >gi|296918696|gb|GG773004.1| GENE 25 17217 - 17381 98 54 aa, chain - ## HITS:1 COG:no KEGG:ECSP_1720 NR:ns ## KEGG: ECSP_1720 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 54 58 111 111 96 98.0 4e-19 MNQLPRRALSRYGLTFQGNILSVNCQCRMLTRVRRTHSTSPVENSLITNLSFVG >gi|296918696|gb|GG773004.1| GENE 26 17782 - 17970 183 62 aa, chain + ## HITS:1 COG:no KEGG:ECSP_2138 NR:ns ## KEGG: ECSP_2138 # Name: not_defined # Def: putative inhibitor of cell division encoded by cryptic prophage CP-933P # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 62 36 97 97 129 100.0 4e-29 METLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKHERELLNKICILSMLARLRPIQKGC WQ >gi|296918696|gb|GG773004.1| GENE 27 17967 - 18158 143 63 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C1460 NR:ns ## KEGG: UTI89_C1460 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 63 4 66 66 119 100.0 3e-26 MNTAFALVLTVFLVSGEPVDTAVSVHRTMQECVTAATEQKIPGNCYPVDKVIHQDNNEIP AGL >gi|296918696|gb|GG773004.1| GENE 28 18251 - 20722 1494 823 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1329 NR:ns ## KEGG: ECS88_1329 # Name: not_defined # Def: exonuclease from phage origin # Organism: E.coli_S88 # Pathway: not_defined # 1 823 1 823 823 1611 100.0 0 MSKVFICAAIPDEQAIKEEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFLV CEDKPGIPRPALDSWDAEYMQENRWDEASASFVPVETESDPMNVTFDKLAPEVQNAVMVK FDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCI PGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARANQQYTENSTGKISPVIAAIH REYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWAKKEVIDNDREDWKRISASMRKQPD ALRYDRQTIFGLVRERPIDIHKDPVALNKYICEYLTTKGVFENEETDLGTVDVLQSSETQ TDAVETEVSDIPKNETAPEAEPSVEREGPFYFLFADKDGEKYGRANKLSGLDKALAAGAT EITKEEYFARKNGTYTGLPQNVDTAEDSEQPEPIKVTADEVNKIMQAANISQPDADKLLA ASRGEFVEGISDPNDPKWIKGIQTRDSVSQNQHESERNYQKAEQNSPNALQNEPETKQPE PVAHQEVEKACTACGQTGGGNCPDCGAVMGDATYQETFDEEYQVEVQEDDPEEMEGAEHP HKENTGGNQHHNSDNETGETADHPIKVNGHHEITSTSRTCDHLMIDLETMGKNPDAPIIS IGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDAL LQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKA IDFDARTAIPFEGERHNALDDARYQAKYVSAIWQKLIPNQADF >gi|296918696|gb|GG773004.1| GENE 29 21013 - 22143 432 376 aa, chain + ## HITS:1 COG:ECs1757 KEGG:ns NR:ns ## COG: ECs1757 COG0582 # Protein_GI_number: 15831011 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 376 1 376 376 766 100.0 0 MARPRKYKTDVPGLSPYFDKRNNKVYWRYRHPITGKNHGLGSIDQKLAETIAAEANSRLA RQQMEQMLSLQEKIISDTGGSSTVTIFLNNYRKIQQERYENGEIKLNTLKQKAAPLRVFD ERFGTRPLDAITVKDVVSVLEEYKARGHNRMGQIFRKVLIDVFREAQQTGDVPPGFNPAE SAKKPQVRISRQRLTFDEWMMIYNAAEKDGYFLQRGMLLALMTGQRLSDICKMQFSDIRD GYLHVEQQKTGTRIAIPLALRCDKLNLTLDDVVSSCRDCVLSPWLLHHHHAKGTAKRGGM VKPATLTVAFKKARDSVDYNWRANGTPPSFHEQRSLSERLFREQGVDTKILLGHSNQKMT DIYNDARGKEWKKLVI >gi|296918696|gb|GG773004.1| GENE 30 22189 - 22827 610 212 aa, chain - ## HITS:1 COG:ECs1756 KEGG:ns NR:ns ## COG: ECs1756 COG3047 # Protein_GI_number: 15831010 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Escherichia coli O157:H7 # 1 212 1 212 212 400 99.0 1e-111 MKKLTVAALAVATLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQL GLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPY VGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDI DTTAKYKSGVTTVKDSVRLDPWVFMFSAGYRF >gi|296918696|gb|GG773004.1| GENE 31 23183 - 23926 575 247 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1554 NR:ns ## KEGG: ECUMN_1554 # Name: yciC # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 247 1 247 247 352 100.0 5e-96 MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPSDAQLAQLNDGVPVSGS SGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVILIIQLVSAGQRVSALRAIG ASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLALAPVMLVQDKMGVFASMRSSM RLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEIGAVLANTLSNLISAVLLIYLFR LYMLIRQ >gi|296918696|gb|GG773004.1| GENE 32 23956 - 24495 572 179 aa, chain + ## HITS:1 COG:ECs1754 KEGG:ns NR:ns ## COG: ECs1754 COG2917 # Protein_GI_number: 15831008 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Escherichia coli O157:H7 # 1 179 1 179 179 288 99.0 5e-78 MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRFRKVEKMALITFVLVVV FGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQRMLGKELTLPQSVWSKLN LAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGIYIYRHMPQEDKS >gi|296918696|gb|GG773004.1| GENE 33 24601 - 24999 377 132 aa, chain + ## HITS:1 COG:yciA KEGG:ns NR:ns ## COG: yciA COG1607 # Protein_GI_number: 16129214 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Escherichia coli K12 # 1 132 1 132 132 264 100.0 3e-71 MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVE GMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAV DPEGKPRALPVE >gi|296918696|gb|GG773004.1| GENE 34 25039 - 25755 507 238 aa, chain - ## HITS:1 COG:ECs1752 KEGG:ns NR:ns ## COG: ECs1752 COG0810 # Protein_GI_number: 15831006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Escherichia coli O157:H7 # 1 238 1 239 239 275 99.0 4e-74 MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQA VQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVEQPKRDVKPVESRP ASPFENTAPARPTSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFD VTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGTTEIQ >gi|296918696|gb|GG773004.1| GENE 35 25883 - 26275 303 130 aa, chain + ## HITS:1 COG:ECs1751 KEGG:ns NR:ns ## COG: ECs1751 COG2350 # Protein_GI_number: 15831005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 130 1 130 130 253 100.0 4e-68 MHGLNKDIIFPLQIFALSNNVLYNFPEQGVVPVLYVIYAQDKADSLEKRLSVRPAHLARL QLLHDEGRLLTAGPMPAVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEH VSVKPFKKVF >gi|296918696|gb|GG773004.1| GENE 36 26557 - 27828 772 423 aa, chain + ## HITS:1 COG:ECs1750 KEGG:ns NR:ns ## COG: ECs1750 COG1226 # Protein_GI_number: 15831004 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Escherichia coli O157:H7 # 7 423 1 417 417 757 99.0 0 MVTEVSVSHWTTFKQTATKLWVTLRHDILALAVFLNGLLIFKTIYGMSVNLLDIFHIKAF SELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIYTLHFYPWLKFSI GFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALYLSEGFNPRIESLMT AFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMTSIFGPLIRGGFNKLVK GNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVI PGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKI KMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLLNSGHGIFSDNDEQETKADSKES AQK >gi|296918696|gb|GG773004.1| GENE 37 27883 - 28056 81 57 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1547 NR:ns ## KEGG: ECUMN_1547 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 57 38 94 94 83 100.0 3e-15 MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILNKQRNSLLFAIYNI >gi|296918696|gb|GG773004.1| GENE 38 28199 - 29659 1190 486 aa, chain + ## HITS:1 COG:cls KEGG:ns NR:ns ## COG: cls COG1502 # Protein_GI_number: 16129210 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli K12 # 1 486 1 486 486 978 100.0 0 MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGE LHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQ LQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLD SAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSM NMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPF EQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQR GVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTV NLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFY FFSPLL >gi|296918696|gb|GG773004.1| GENE 39 29694 - 30023 494 109 aa, chain + ## HITS:1 COG:yciU KEGG:ns NR:ns ## COG: yciU COG3099 # Protein_GI_number: 16129209 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 109 27 135 135 199 99.0 1e-51 MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWLEH VDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE >gi|296918696|gb|GG773004.1| GENE 40 30076 - 31080 850 334 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 329 1 325 329 332 51 8e-90 MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESG CGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTI GEIIAEPLRIYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALI LEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL GHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSGCVF RTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL >gi|296918696|gb|GG773004.1| GENE 41 31077 - 32090 582 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 12 317 4 311 329 228 40 9e-59 MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGS GKSQTAFALMGLLAANGRIGGSATFNGREILNLPERELNKLRAEQISMIFQDPMTSLNPY MRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIA MALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVL VMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCP FQPRCPHAMDICSSAPPLEEFTPGRLRACFKPVEELL >gi|296918696|gb|GG773004.1| GENE 42 32102 - 33010 992 302 aa, chain - ## HITS:1 COG:STM1744 KEGG:ns NR:ns ## COG: STM1744 COG1173 # Protein_GI_number: 16765088 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 302 1 302 302 510 96.0 1e-144 MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLIVLVLIALFVILAPMLS QFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVVVGT LYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA RIVRGQTLSLKRKEFIEAAQVGGVSTPGIVIRHIVPNVLGVVVVYASLLVPSMILFESFL SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK DR >gi|296918696|gb|GG773004.1| GENE 43 33025 - 33945 758 306 aa, chain - ## HITS:1 COG:ECs1744 KEGG:ns NR:ns ## COG: ECs1744 COG0601 # Protein_GI_number: 15830998 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 548 99.0 1e-156 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIM TQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAA LKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVA LSLAYIASIARISRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAF VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI DPKIRY >gi|296918696|gb|GG773004.1| GENE 44 34031 - 35662 1688 543 aa, chain - ## HITS:1 COG:ECs1743 KEGG:ns NR:ns ## COG: ECs1743 COG4166 # Protein_GI_number: 15830997 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 543 1 543 543 1082 100.0 0 MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDPHKIEGV PESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHLRKDAKWSDGTPVTAQDFV YSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSEPVPY FYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPTYWNNA KTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPDEVHVDPYLCTYY YEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKAQGDMPAYGYTPPYTDGAKLTQPEWFG WSQEKRNEEAKKLLAEAGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNIGVNVKLVN QEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETL KVTDEAQRTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNTYTRNMYI VKH >gi|296918696|gb|GG773004.1| GENE 45 36081 - 36242 153 53 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1310 NR:ns ## KEGG: ECS88_1310 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 12 53 63 104 104 77 100.0 2e-13 MSLFSDYSSSSEMHNNLTIDYYLALSSTKGSGITNIISIILQQAQDYDVAKIT >gi|296918696|gb|GG773004.1| GENE 46 36400 - 37047 456 215 aa, chain - ## HITS:1 COG:ECs1742 KEGG:ns NR:ns ## COG: ECs1742 COG2095 # Protein_GI_number: 15830996 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 377 100.0 1e-104 MIQTLFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWI SLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGV VPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQ TGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN >gi|296918696|gb|GG773004.1| GENE 47 37524 - 40199 2898 891 aa, chain + ## HITS:1 COG:ECs1741_2 KEGG:ns NR:ns ## COG: ECs1741_2 COG1454 # Protein_GI_number: 15830995 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 448 872 1 425 444 858 99.0 0 MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMG IVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTA IFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNA LMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTF DNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQGKELKAVQDVILKNGALNAAIVGQP AYKIAELAGFSVPENTKILIGEVTVVDESEPFAHEKLSPTLAMYRAKDFEDAVEKAEKLV AMGGIGHTSCLYTDQDNQPARVSYFGQKMKTARILINTPASQGGIGDLYNFKLAPSLTLG CGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHK RALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSIVRKGAELANSFKPDVI IALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSG TGSEVTPFAVVTDDTTGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAME AYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLG VCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIAD HLGLSAPGDRTAAKIEKLLAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQ CTGANPRYPLISELKQILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA >gi|296918696|gb|GG773004.1| GENE 48 40353 - 41390 580 345 aa, chain + ## HITS:1 COG:yi41 KEGG:ns NR:ns ## COG: yi41 COG3385 # Protein_GI_number: 16132099 # Func_class: L Replication, recombination and repair # Function: FOG: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 304 1 304 442 589 95.0 1e-168 MLIGQALDLVSRYDSLRNPLTSLGDYLAPKLISRCLAESGTVTLRKRRLPLEMMVWCIVG MALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQTRQRLGIEAVRRVFTKTAQLWHNATP HPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTHAGNPALYPQVKMVCQMELTSHLLTTA AFGTMKNSENELAEQLIEQTGDNTLTLMDKGYYSPGLLNAWSLAGEHRHWMIPLRKGAQY EEIRKLGKGDHLVKLNISPQARKKWPGLGNEVTARLLTVTRKGKVCHLLTSMTDAIRFTG TYTGADARSCKYGTTSEITDKKGKGLPESGKGEALEIPHSPEKEA >gi|296918696|gb|GG773004.1| GENE 49 41710 - 42327 318 205 aa, chain - ## HITS:1 COG:ECs1740 KEGG:ns NR:ns ## COG: ECs1740 COG1435 # Protein_GI_number: 15830994 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 407 99.0 1e-114 MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAK LFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSEVVDQLDIPVLCYGLRTDF RGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQAGRPYNEGEQVVIGGNERYVS VCRKHYKEALEVGSLTAIQERHRHD >gi|296918696|gb|GG773004.1| GENE 50 42931 - 43344 552 137 aa, chain + ## HITS:1 COG:ECs1739 KEGG:ns NR:ns ## COG: ECs1739 COG2916 # Protein_GI_number: 15830993 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 197 100.0 4e-51 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK KAMDEQGKSLDDFLIKQ >gi|296918696|gb|GG773004.1| GENE 51 43495 - 44403 972 302 aa, chain - ## HITS:1 COG:ECs1738 KEGG:ns NR:ns ## COG: ECs1738 COG1210 # Protein_GI_number: 15830992 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 302 1 302 302 589 100.0 1e-168 MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLV THSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVL CAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGHSQIMVEPVADVTAYGV VDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQ LTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNTLGTEFKAWLEEEMGI KK >gi|296918696|gb|GG773004.1| GENE 52 44605 - 45618 618 337 aa, chain - ## HITS:1 COG:STM1753_1 KEGG:ns NR:ns ## COG: STM1753_1 COG0784 # Protein_GI_number: 16765097 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Salmonella typhimurium LT2 # 1 134 1 134 134 244 91.0 1e-64 MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIA MPRMNGLKLLEHIRNSGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMV FACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQELQPPVQQVISQCRVNYRQLVA ADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPE LGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVP LGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE >gi|296918696|gb|GG773004.1| GENE 53 45710 - 46615 377 301 aa, chain - ## HITS:1 COG:ECs1736 KEGG:ns NR:ns ## COG: ECs1736 COG1752 # Protein_GI_number: 15830990 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Escherichia coli O157:H7 # 1 301 14 314 314 610 100.0 1e-174 MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALED WVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGR ELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVNPIPISLTRALGADIVIAVDL QHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQ VLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVEKKMDELLPLVRTN I >gi|296918696|gb|GG773004.1| GENE 54 46728 - 47186 205 152 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90021194|ref|YP_527021.1| ribosomal protein L20 [Saccharophagus degradans 2-40] # 4 127 3 131 134 83 38 5e-15 MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAA ALRAELIAGFAHTEWLGLTVFEHCWQDGGNIGFVSFVARFTEGGKTGAIIERSRFLKENG QWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ >gi|296918696|gb|GG773004.1| GENE 55 47236 - 48078 891 280 aa, chain + ## HITS:1 COG:purU KEGG:ns NR:ns ## COG: purU COG0788 # Protein_GI_number: 16129193 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate hydrolase # Organism: Escherichia coli K12 # 1 280 1 280 280 563 99.0 1e-161 MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFND STLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGN HDTLRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMRVLTPEFVAR FPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHT YTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNRTIIL >gi|296918696|gb|GG773004.1| GENE 56 48871 - 50070 195 399 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1298 NR:ns ## KEGG: ECS88_1298 # Name: not_defined # Def: transposase # Organism: E.coli_S88 # Pathway: not_defined # 1 399 11 409 409 810 100.0 0 MPARQVCQNFFRGALAPFHKYRQNALLDATIALINGASLTLTSIGRYLPGNAQVKNKIKR VDRLLGNESLHHDIPLIFRNIISMLTSKLSLCVIAVDWSGYPSQEYHVLRASLICYGHSI PLLSWIVPSEKQQNAKIQQAFLNTLSEAVNPKARVIIVTDAGFQNAWFRHIKSLGWDFIG RIRGNKQLHLARKGECWFRRQELQASNKPEYLGPGTLSRAEYARCDGHFYLHKKEPKGRR NKRSRCGIARPSQIKDARSAAKEPWLIFSSTDDFKPREIMKLYSRRMQIEQNFRDEKSER FGFGLRASYSCSAGRMLVLSLLATLSTIVLWLIGYHAENQGLHLRYQANSIKTRRVISYL TLAENVLRHSPLILKRTVLSTILNHLTRTYQNMVLVYYR >gi|296918696|gb|GG773004.1| GENE 57 50123 - 50800 868 225 aa, chain - ## HITS:1 COG:ECs1732 KEGG:ns NR:ns ## COG: ECs1732 COG2181 # Protein_GI_number: 15830986 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 422 100.0 1e-118 MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGIL GIFVGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCLIGGVLLLKRRLFSPRVRA TTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGV AFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKYQLVRARH >gi|296918696|gb|GG773004.1| GENE 58 50800 - 51510 833 236 aa, chain - ## HITS:1 COG:ECs1731 KEGG:ns NR:ns ## COG: ECs1731 COG2180 # Protein_GI_number: 15830985 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 432 100.0 1e-121 MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLPKEDAHALGIFLRDLTTMDPLDAQA QYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHGLQLNSRELPDHLPLYLEY LAQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVLFDLLLKLANTAIDSDKVAEKIAD EARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRRFAGAVAPQYLNITTGGQH >gi|296918696|gb|GG773004.1| GENE 59 51507 - 53045 1741 512 aa, chain - ## HITS:1 COG:narH KEGG:ns NR:ns ## COG: narH COG1140 # Protein_GI_number: 16129188 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Escherichia coli K12 # 1 512 1 512 512 1093 99.0 0 MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNVETKPGQGFPTDWENQE KYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDFDYQNLHTAPEGSKS QPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKNFDNIQKAMYSQFENTFMMYL PRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGK SEKCIFCYPRIEAGQPTICSETCVGRIRYLGVLLYDADAIERAASTENEKDLYQRQLDVF LDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMAMEWKLALPLHPEYRTLPMVWYVPPLS PIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTKPVLRALKRMLAMRHYKRAET VDGKVDTRALEEVGLTEAQAQEMYRYLAIANYEDRFVVPSSHRELAREAFPEKNGCGFTF GDGCHGSDTKFNLFNSRRIDAIDVTSKTEPHP >gi|296918696|gb|GG773004.1| GENE 60 53042 - 56785 4503 1247 aa, chain - ## HITS:1 COG:ECs1729 KEGG:ns NR:ns ## COG: ECs1729 COG5013 # Protein_GI_number: 15830983 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Escherichia coli O157:H7 # 1 1247 1 1247 1247 2594 99.0 0 MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD LVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSL LGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLA NYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMII VGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQ RPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAP QLGTNPLTIAREAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGS SGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTC LYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVG HLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERF TSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLA PETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEH VSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVMGQKSN GNPEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKELGIADNDWIEVFN SNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIG GYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK >gi|296918696|gb|GG773004.1| GENE 61 57178 - 58569 1156 463 aa, chain - ## HITS:1 COG:narK KEGG:ns NR:ns ## COG: narK COG2223 # Protein_GI_number: 16129186 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Escherichia coli K12 # 1 463 1 463 463 801 100.0 0 MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPCLLLAFCVWMLFSAVAV NLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGRRWTAFSTGILIIPCVWLG FAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPKQKQGGALGLNGGLGNMGVSV MQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWIWVPFLAIFTIAAWFGMNDLATS KASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQFPDVQILQYAFFGPFI GALARSAGGALSDRLGGTRVTLVNFILMAIFSGLLFLTLPTDGQGGSFMAFFAVFLALFL TAGLGSGSTFQMISVIFRKLTMDRVKAEGGSDERAMREAATDTAAALGFISAIGAIGGFF IPKAFGSSLALTGSPVGAMKVFLIFYIACVVITWAVYGRHSKK >gi|296918696|gb|GG773004.1| GENE 62 58664 - 58882 134 72 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1292 NR:ns ## KEGG: ECS88_1292 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 72 1 72 72 139 100.0 3e-32 MSNNLNECDDTFWNGSILGYWLKYTHTRKELLLICRVVSRFTSVRVGILQHREKSHNFYE ITVLTMDNDKYQ >gi|296918696|gb|GG773004.1| GENE 63 58908 - 60704 1375 598 aa, chain + ## HITS:1 COG:ECs1727 KEGG:ns NR:ns ## COG: ECs1727 COG3850 # Protein_GI_number: 15830981 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Escherichia coli O157:H7 # 1 598 1 598 598 1130 99.0 0 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADTHTQYGILLATLPQGRHLSHDQQQ LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG DALPESSRELLSQIRNELNASWVQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE >gi|296918696|gb|GG773004.1| GENE 64 60697 - 61347 820 216 aa, chain + ## HITS:1 COG:ECs1726 KEGG:ns NR:ns ## COG: ECs1726 COG2197 # Protein_GI_number: 15830980 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 346 100.0 2e-95 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF >gi|296918696|gb|GG773004.1| GENE 65 61348 - 62742 858 464 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C1416 NR:ns ## KEGG: UTI89_C1416 # Name: ychP # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 464 1 464 464 895 100.0 0 MSRFVPRIIPFYLLLLAAGGTANAQSTFEQKAANPFDNNNDGLPDLGMAPENHDGEKHFA EIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHVESWLSPWGNASVDVKVDN EGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDDGLVSNVGVGQRWARGSWLVGYNTFYD NLLDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQTATQEQRMARGYDLTARMRMPFY QHLNTSVSVEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVTAQHKQGESGENQN NLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATP PWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSEEGWTLIMPDWQNGEG ASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP >gi|296918696|gb|GG773004.1| GENE 66 62927 - 63280 368 117 aa, chain + ## HITS:1 COG:ECs1724 KEGG:ns NR:ns ## COG: ECs1724 COG1553 # Protein_GI_number: 15830978 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Escherichia coli O157:H7 # 1 117 1 117 117 223 99.0 5e-59 MQKIVIVANGAPYGSESLFNSLRLAIALREQENNLDLRLFLMSDAVTAGLRGQKPGEGYN IQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF >gi|296918696|gb|GG773004.1| GENE 67 63324 - 63998 548 224 aa, chain - ## HITS:1 COG:chaC KEGG:ns NR:ns ## COG: chaC COG3703 # Protein_GI_number: 16129181 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in cation transport # Organism: Escherichia coli K12 # 1 224 15 238 238 456 99.0 1e-128 MNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESC TGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKRE MITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQ YLFSLEQELIKLGMQDDGLNELLVSVKKLLAENYPDGVLRPGFA >gi|296918696|gb|GG773004.1| GENE 68 64177 - 64407 265 76 aa, chain - ## HITS:1 COG:ECs1722 KEGG:ns NR:ns ## COG: ECs1722 COG4572 # Protein_GI_number: 15830976 # Func_class: R General function prediction only # Function: Putative cation transport regulator # Organism: Escherichia coli O157:H7 # 1 76 1 76 76 99 100.0 1e-21 MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAV KHEYAKGDDDKWHKKS >gi|296918696|gb|GG773004.1| GENE 69 64677 - 65777 1137 366 aa, chain + ## HITS:1 COG:ECs1721 KEGG:ns NR:ns ## COG: ECs1721 COG0387 # Protein_GI_number: 15830975 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/H+ antiporter # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 576 99.0 1e-164 MSNAQEAVKTRHKETSLIFPVLALVVLFLWGGSQTLPVVIAINLLALIGILSSAFSVVRH ADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVG FSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPAANFSTGQALLVALISAA MYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAHSSLWHAIWLIVHLIAVIAVTKM NASPLETLLDSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATIS LTVPVVTLIAFMTGNELQFALGAPEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAY LMTIFA >gi|296918696|gb|GG773004.1| GENE 70 66156 - 66290 141 44 aa, chain + ## HITS:1 COG:no KEGG:SBO_1851 NR:ns ## KEGG: SBO_1851 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 44 48 91 91 86 100.0 3e-16 MLSLQQGGYMTLAQFAMIFWHDLAAPILAGIITAAIVGWWRNRK >gi|296918696|gb|GG773004.1| GENE 71 66463 - 67317 978 284 aa, chain - ## HITS:1 COG:ECs1720 KEGG:ns NR:ns ## COG: ECs1720 COG2877 # Protein_GI_number: 15830974 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 567 99.0 1e-162 MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLAR QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEKVILCDRGANFGYDNLVVD MLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEA HPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKGFEELDTSK >gi|296918696|gb|GG773004.1| GENE 72 67353 - 68162 799 269 aa, chain - ## HITS:1 COG:ECs1719 KEGG:ns NR:ns ## COG: ECs1719 COG2912 # Protein_GI_number: 15830973 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 520 99.0 1e-147 MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLE KLIALFYGEWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVI FPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVI RKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSY FVEQCPEDPISEMIRAQINNIAHKHIVLH >gi|296918696|gb|GG773004.1| GENE 73 68166 - 68540 375 124 aa, chain - ## HITS:1 COG:ychQ KEGG:ns NR:ns ## COG: ychQ COG3094 # Protein_GI_number: 16129176 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 124 7 130 130 197 98.0 5e-51 MLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHIQ PFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKV PLLG >gi|296918696|gb|GG773004.1| GENE 74 68555 - 69388 484 277 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 7 274 23 289 294 191 40 2e-47 MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLT RRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGT GAIALALASERPDCEITAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMI VSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW QQGEAVRQAFIFAGYHDVETCRDYGDNERVTLGRYYQ >gi|296918696|gb|GG773004.1| GENE 75 69388 - 70470 1223 360 aa, chain - ## HITS:1 COG:ECs1716 KEGG:ns NR:ns ## COG: ECs1716 COG0216 # Protein_GI_number: 15830970 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Escherichia coli O157:H7 # 1 360 1 360 360 632 100.0 0 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS GDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSEQE >gi|296918696|gb|GG773004.1| GENE 76 70512 - 71768 1250 418 aa, chain - ## HITS:1 COG:ECs1715 KEGG:ns NR:ns ## COG: ECs1715 COG0373 # Protein_GI_number: 15830969 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Escherichia coli O157:H7 # 1 418 1 418 418 724 98.0 0 MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGGVVLSTCNRTELYLSVE ERDDLQEALIRWLCDYHNLNEDDLRNSLYWHQDNDAVSHLMRVASGLDSLVLGEPQILGQ VKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIFESL STVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVGAEVIALSDIDERL READIIISSTASPLPIIGKGMVERALKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSV DDLQSIISHNLAQRKAAAVEAETIVAQEASEFMAWLRAQSASETIRDYRSQAEQVRDELT AKALAALEQGGDAQTIMQDLAWKLTNRLIHAPTKSLQQAARDGDNERLNILRDSLGLE >gi|296918696|gb|GG773004.1| GENE 77 71916 - 72605 593 229 aa, chain + ## HITS:1 COG:ECs1714 KEGG:ns NR:ns ## COG: ECs1714 COG3017 # Protein_GI_number: 15830968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 # 23 229 1 207 207 410 99.0 1e-114 MANGNASIKGYNCNVSQGLVIIMPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQ WRQHQQDVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNA QPGNVQLVDNKGQRYTSDDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLS EITYSQNGKNWKVVYGGYDTKTQPAMPANMELTDGGQRIKLKMDNWIVK >gi|296918696|gb|GG773004.1| GENE 78 72605 - 73456 641 283 aa, chain + ## HITS:1 COG:ECs1713 KEGG:ns NR:ns ## COG: ECs1713 COG1947 # Protein_GI_number: 15830967 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 561 99.0 1e-160 MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGV EHEDNLIVRAARLLMKTAADSGRLSTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNH LWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIP TPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGT GACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRAML >gi|296918696|gb|GG773004.1| GENE 79 73541 - 74554 1029 337 aa, chain + ## HITS:1 COG:ECs1712 KEGG:ns NR:ns ## COG: ECs1712 COG0462 # Protein_GI_number: 15830966 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Escherichia coli O157:H7 # 23 337 1 315 315 595 99.0 1e-170 MPGPHSFRQILSTNGRMPEVLLVPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDG EVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQD RRVRSARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQ LNLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLS DEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH >gi|296918696|gb|GG773004.1| GENE 80 74706 - 76358 1793 550 aa, chain + ## HITS:1 COG:ECs1711 KEGG:ns NR:ns ## COG: ECs1711 COG0659 # Protein_GI_number: 15830965 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Escherichia coli O157:H7 # 1 550 1 550 550 915 99.0 0 MPFRALIDACWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIGSGVAPQYGLYTAAVAG IVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLLSGIFLILMGLARFGRLIE YIPVSVTLGFTSGIGITIGTMQIKDFLGLQMAHVPEHYLQKVGALFMALPTINVGDAAIG IVTLGILVFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGHVATIGSQFHYVLADGSQGNG IPQLLPQLVLPWDLPNSEFTLTWDSIRTLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHK ANSELVGQGLGNIIAPFFGGITATAAIARSAANVRAGATSPISAVIHSILVILALLVLAP LLSWLPLSAMAALLLMVAWNMSEAHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISV GIVLASLLFMRRIARMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRI VILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNLEFQPLRTMARAGIQPIPGRLAFF PNRRAALADL >gi|296918696|gb|GG773004.1| GENE 81 76413 - 76691 300 92 aa, chain - ## HITS:1 COG:no KEGG:ECO111_1534 NR:ns ## KEGG: ECO111_1534 # Name: ychH # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 92 1 92 92 152 100.0 3e-36 MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAG ARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS >gi|296918696|gb|GG773004.1| GENE 82 76969 - 77553 502 194 aa, chain + ## HITS:1 COG:ECs1709 KEGG:ns NR:ns ## COG: ECs1709 COG0193 # Protein_GI_number: 15830963 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Escherichia coli O157:H7 # 1 194 1 194 194 370 100.0 1e-103 MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVR LLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDI ISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDG LTKATNRLHAFKAQ >gi|296918696|gb|GG773004.1| GENE 83 77670 - 78761 1359 363 aa, chain + ## HITS:1 COG:ECs1708 KEGG:ns NR:ns ## COG: ECs1708 COG0012 # Protein_GI_number: 15830962 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Escherichia coli O157:H7 # 1 363 1 363 363 720 99.0 0 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA LDLSAEEKAAVRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL FNV >gi|296918696|gb|GG773004.1| GENE 84 78897 - 79127 145 76 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1270 NR:ns ## KEGG: ECS88_1270 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 76 1 76 76 136 100.0 2e-31 MRLLCDNNHSALTVQEFVMKKTFIFSLLAIVFASLLSACVPHHHHRHNDGPRGPAASGKP MPPSNGGPNHGSHGRY >gi|296918696|gb|GG773004.1| GENE 85 79165 - 81084 1462 639 aa, chain - ## HITS:1 COG:ycgU KEGG:ns NR:ns ## COG: ycgU COG3284 # Protein_GI_number: 16129164 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; K Transcription # Function: Transcriptional activator of acetoin/glycerol metabolism # Organism: Escherichia coli K12 # 1 638 4 641 642 1250 98.0 0 MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLGQAA LEDAWEYMASRECALLILDETACILSRNGDPQTLQQLSTLGFNDGTYCAEGIIGTCALSL AAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPLTLA IAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLRLDA TASQGRAITELLTLPAVLQQAIKQSHPLKHVEATFESQHQFIDAVITLKPIIETQGTSFI LLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVG KALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFIGGDRTDSENGRLSRLELAHGGTL FLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTTADLAMLVEQNRFSRQ LYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGND FELYSVIENLALSSDNGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAA QVTGGRIQEMSALLGIGRTTLWRKMKQHGIDVSQFKRRG >gi|296918696|gb|GG773004.1| GENE 86 81312 - 82382 1049 356 aa, chain + ## HITS:1 COG:ECs1705 KEGG:ns NR:ns ## COG: ECs1705 COG2376 # Protein_GI_number: 15830959 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli O157:H7 # 1 356 11 366 366 727 99.0 0 MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAGKVALLSGGGSGHEPMH CGYIGQGMLSGACPGEIFTSPTPDKIFECAMQIDGGEGVLLIIKNYTGDILNFETATELL HDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLDACAELGRKL NNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRPFSSLDQTVDEMFD TLLENGSYHRTLRFWDYQQGSWQEEPQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRL TTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLKVDDETLAFWDAPVHTPALNWGK >gi|296918696|gb|GG773004.1| GENE 87 82393 - 83025 550 210 aa, chain + ## HITS:1 COG:ECs1704 KEGG:ns NR:ns ## COG: ECs1704 COG2376 # Protein_GI_number: 15830958 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli O157:H7 # 1 210 1 210 210 392 96.0 1e-109 MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKD IGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQTTQARQSLTLEELYQMFRDGADGVISR GKAEPGDKTMCDVWVPVVESLRQSCEQNLPVPAALDAASSIAESAAQSTITMQARKGRAS YLGERSIGHQDPGATSVMFMMQMLALAAKE >gi|296918696|gb|GG773004.1| GENE 88 83036 - 84454 1138 472 aa, chain + ## HITS:1 COG:ycgC_3 KEGG:ns NR:ns ## COG: ycgC_3 COG1080 # Protein_GI_number: 16129161 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli K12 # 258 472 1 215 215 409 97.0 1e-114 MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPHNPIGTDAVKVMEAIESVA DADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVEGTLAATVSAASGADIDKV IFDAMHALEAKREQLGLPSSDTEISDTCPPYDEEARSLSVVIKNRNGLHVRPASRLVYTL STFNADMLLEKNGKCVTPDSINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFG ETEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTLTVEEEQERLRQAIDFTLLDLMTLT AKAETCGLDDIAAIFSGHHTLLDDPELQAAASELLQHEHCTAEYAWQQVLKELSQQYQQL DDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGI CLSAGSPLSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG >gi|296918696|gb|GG773004.1| GENE 89 84613 - 84828 104 71 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C1390 NR:ns ## KEGG: UTI89_C1390 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 71 1 71 71 142 100.0 5e-33 MQAGINAIFCGREGAGDFISHSPLAKPNKTVFKYQKTLVQDRTSCMIEITFCELTDILEK GIKGINNGEIE >gi|296918696|gb|GG773004.1| GENE 90 84773 - 86470 1616 565 aa, chain + ## HITS:1 COG:treA KEGG:ns NR:ns ## COG: treA COG1626 # Protein_GI_number: 16129160 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Escherichia coli K12 # 1 565 1 565 565 1076 97.0 0 MKSPAPSRPQKMALIPACIFLCFAALSVQAEETSVTPQPPDILLGPLFNDVQNAKLFPDQ KTFADAVPNSDPLMILADYRMQQNQSGFDLRHFVNVNFTLPKEGEKYVPPEGQSLREHID GLWPVLTRSTENTEKWDSLLPLPKPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADM VANFAHEIDNYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGDAALKQYLPQMQKEYAY WMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIY RDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAIGDNAM ANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAKDRAS KMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMDISWHF LTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCD NVPATRPLSESTTQPLKQKEAEPTP >gi|296918696|gb|GG773004.1| GENE 91 86807 - 87829 505 340 aa, chain + ## HITS:1 COG:ECs1699 KEGG:ns NR:ns ## COG: ECs1699 COG0614 # Protein_GI_number: 15830953 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 340 1 340 340 616 96.0 1e-176 MSLTRRRFTQILASTLFLHHLPSFAQSVKFWASRTLPEAQNITRIVSAGAPADLLLLAVA PEKMVGFSSFDFARQALIPLPEHIRQFPRLGRLAGRASTLSLEGLMALHPDLVVDCGNTD ETWISQARQVSEQTQIPWLLLNGKLEQSAEQLTTLGKTLGEEHRAAEQANLASRFVGEAQ AFATSPAANLSFYAARGPRGLETGLQGSLHTEAAELLGLHNVAQIADRHGLTQVSMENLL RWQPDIILVQEAVTADFIRRDPLWQGVKAVAEQRILFLSGLPFGWLDAPPGINRLLGLRR LHAWLDPAINRQFKSDIQHYAQLFWHCSLSDADYQKLVAS >gi|296918696|gb|GG773004.1| GENE 92 87829 - 88809 715 326 aa, chain + ## HITS:1 COG:ECs1698 KEGG:ns NR:ns ## COG: ECs1698 COG0609 # Protein_GI_number: 15830952 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 1 314 1 314 326 502 98.0 1e-142 MRTVNGCILLLAAISITFAAVSGAYHLDMQQLLALILRQENVPVQEQIVFWQIRVPRILA ALFLGAALAGAGTTYQGMFRNPLVSPDILGVSAGAGLGACAAILWGLSIVYIQLYAFCGG LMVVAGVWLITRRVTRHDPILTLVLVGIALGTLCGAGISLIKTLADPYTQLPSITFWLLG GLSTVTLRDLCYAAPIILIGSLPLFFLRWRMNLLTLSDDEARSLGLNVTRLRFGLIVCAT LITASTVAIAGIIGWVGLVVPHIARLLTGHNHQQLLPMAMCTGAILLLLTDTLARSIGTT EIPLGILTAFVGAPFFLFLLLRGGRQ >gi|296918696|gb|GG773004.1| GENE 93 88806 - 89564 245 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] # 3 212 1 205 205 99 33 1e-19 MTLLAVRHASLGYSRHPVLRDVSFTLSQGTICCLLGANGCGKTTLMRSILGVIPLLKGEI LLDSLPVQTLSHRQRAQAIAWVPQAHDGIFAFSVLDMVLMGLAPTIGAFSVPGKQERLKA TEQLEKLGILHLAARRWNTLSGGERQLALIARALVQQPRLLLLDEPASSLDFGHQIQLLD TLAQLKNNGMTMLMSTHHPLHANAIADSIIQVEPDGRVTQGLPTEQLTTKKLAALYRVSA DQIHHHLSAIKH >gi|296918696|gb|GG773004.1| GENE 94 89574 - 90386 679 270 aa, chain + ## HITS:1 COG:ECs1696 KEGG:ns NR:ns ## COG: ECs1696 COG0500 # Protein_GI_number: 15830950 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 214 1 214 214 404 98.0 1e-112 MLIDDIDFADLYLQQLRLAHRTEKTPDHWDQRAEKMAENCASPTDSYLQQLTSKIDLQGA QTLFDMGCGPGTVSLALADKLTTIYGVDYSQGMLNVAARRAAALKADNVHWIQRAWEEDW SDLPRCDIAVASRSTLVADMRQAMSKLNNQARLRVYTTHLVSTSFVSPAIQRAAGREVIE LPNYIFALNVLYQMGIYAHVDFIRGQNCQQDNSTWERFEQNVSWSLGALNDDERERLYRW YQQQDARALAPASRDWALIWWDSVPQETLR >gi|296918696|gb|GG773004.1| GENE 95 90383 - 91237 565 284 aa, chain + ## HITS:1 COG:ECs1694 KEGG:ns NR:ns ## COG: ECs1694 COG0157 # Protein_GI_number: 15830948 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinate-nucleotide pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 555 98.0 1e-158 MIFLSQAQIDALLLEDIQGGDLTTRALNIGHQHGYIEFFLRQGGCVSGISVACKMLTTLG LTIDDAVSDGSQANAGQRLIRAQGNAAALHQGWKAVQNVLEWSCGVSDYLAQMLALLRER YPDGNIACTRKAIPGTRLLASQAILAAGGLIHRAGCAETILLFANHRHFLHDNQDWSGAI NQLRRHAPEKKIVVEADTPKEAIAALRAQPDVLQLDKFSPQQATEIAQIAPSLAPHCTLA LTGGINLTTLKNYLDCGIRLFITSAPYYAAPADIKVSLQPAASI >gi|296918696|gb|GG773004.1| GENE 96 91263 - 93233 2008 656 aa, chain + ## HITS:1 COG:ECs1693 KEGG:ns NR:ns ## COG: ECs1693 COG1629 # Protein_GI_number: 15830947 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 1 656 1 656 656 1230 98.0 0 MRLKKRYLCTVLTLAFTQQAVAAQESDTLTVWSSPVSSTTTTVLDQPTMKALDKQNVAQA LSVVPGVVLQKSGSRNEEQVKVRGFDSRQVPVYFDGVPIYVPYDGNLDLARILTNNLGAV EVSKGYSSLLQGPNQMGGAINITTQKPTKPLEASLGYRQGWSRSQDNAYDMHASFAASSD LGYLQVSGSQLKQDFLGLPHGVNNDIAGKHGKMINSSADDKRGIVKLGFTPRENDEYTLT YIKQDGEKDNPPYSGNSGQKSRYWQWPEYDKESFYYQGTTQLNDRFTLKSRLYRDTFENT LMMYNSLADLKNKKGSYSHYSDYSDGAGLQLAADVRENDLLSFAVNWKDDVHREKGAPHA AYDRYEDRTWSLASEYQWAAADNVDVVAGISYDWRDSVEAKKHEKDGSITHYDDNNQSAF NWQVMGKYHFANEDTLALSYYDRTRFPTLKERYTTSKPAYNQIAIVNPQLKPERARGVDL TWNGAFTHDWGFEVSVYYNRVSDAILSHNIDADTIQNQNSGTVDYSGLDAGIKGKISNIL DVGLSYALIHADAKRKDIGKITDLPTQTMTAWMTLKPWEPLSVTLSEEARSSSYSNSDGS QKAAGFAVTHIRADYTLGHGFSVNASVNNLFDTKYAYSEGFIEEGRNFWAGIEYTF >gi|296918696|gb|GG773004.1| GENE 97 93292 - 93537 268 81 aa, chain - ## HITS:1 COG:ymgE KEGG:ns NR:ns ## COG: ymgE COG2261 # Protein_GI_number: 16129158 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 81 1 81 84 96 97.0 1e-20 MGIIAWIIFGLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGGWLATMFGIGGSISGFN LHSFLVAVVGAILVLGVFRLL >gi|296918696|gb|GG773004.1| GENE 98 93738 - 94472 689 244 aa, chain + ## HITS:1 COG:ycgR KEGG:ns NR:ns ## COG: ycgR COG5581 # Protein_GI_number: 16129157 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted glycosyltransferase # Organism: Escherichia coli K12 # 1 244 1 244 244 471 97.0 1e-133 MSHYHEQFLKQNLLAVLGVLRDLHKAAIPLRISWNGGQLISKILVITPDKLVLDFGSQAE DNNAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFITVPPPTLWFVQRRRYFRIS APLHPPYFCQTKLADNSTLRFRLHDLSLGGMGALLETAKPAELHEGMRFAQIEVNMGQWG VFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSPTVERQLQRIIFSLEREAREKAD KVRD >gi|296918696|gb|GG773004.1| GENE 99 94474 - 95085 614 203 aa, chain - ## HITS:1 COG:ECs1687 KEGG:ns NR:ns ## COG: ECs1687 COG0741 # Protein_GI_number: 15830942 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli O157:H7 # 1 203 39 241 241 405 99.0 1e-113 MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAI IAIESGGNPNAVSKSNAIGLMQIKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAY LNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLDHV ARNHPAPQAPRYIYKLEQALDAM >gi|296918696|gb|GG773004.1| GENE 100 95024 - 95212 59 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293409572|ref|ZP_06653148.1| ## NR: gi|293409572|ref|ZP_06653148.1| predicted protein [Escherichia coli B354] conserved hypothetical protein [Escherichia coli MS 78-1] Hypothetical protein c1642 [Escherichia coli CFT073] hypothetical protein UTI89_C1379 [Escherichia coli UTI89] predicted protein [Escherichia coli B354] conserved hypothetical protein [Escherichia coli MS 78-1] # 1 62 1 62 62 127 100.0 2e-28 MGQLSETETWQFLADNRNEMYIMPLRCAVVTSTAIPGYKDRRSEIEMVCLFDCVISGLFI KA >gi|296918696|gb|GG773004.1| GENE 101 95185 - 96099 801 304 aa, chain + ## HITS:1 COG:ldcA KEGG:ns NR:ns ## COG: ldcA COG1619 # Protein_GI_number: 16129155 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Escherichia coli K12 # 1 304 1 304 304 619 98.0 1e-177 MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSL ARLTTPNTIVLSVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAQGN VITFSGPMLVANFGADELNAFTEHHFWLALRNKTFTIEWQGEGPTCQTEGTLWGGNLAML ISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPND YDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTQEGTQLTISGHP VLKM >gi|296918696|gb|GG773004.1| GENE 102 96194 - 97930 1793 578 aa, chain + ## HITS:1 COG:STM1801 KEGG:ns NR:ns ## COG: STM1801 COG3263 # Protein_GI_number: 16765142 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Salmonella typhimurium LT2 # 1 577 1 577 577 962 92.0 0 MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPF AYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLI EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQQHE SSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFALTTA LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAI PALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLEN ARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQ LSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALG KLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAA PVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES >gi|296918696|gb|GG773004.1| GENE 103 97987 - 99057 904 356 aa, chain - ## HITS:1 COG:ZdadX KEGG:ns NR:ns ## COG: ZdadX COG0787 # Protein_GI_number: 15801412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli O157:H7 EDL933 # 1 356 1 356 356 710 99.0 0 MTRPIQASLDLQALKQNLSIVRQAAPRARVWSVVKANAYGHGIERIWSAIGATDGFALLN LEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDI YLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARIEQAA EGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEII GVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTVS MDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVPVVTV >gi|296918696|gb|GG773004.1| GENE 104 99067 - 100365 1427 432 aa, chain - ## HITS:1 COG:ECs1684 KEGG:ns NR:ns ## COG: ECs1684 COG0665 # Protein_GI_number: 15830938 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 891 99.0 0 MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANAGQISPGYAAPWAAPGV PLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLK ALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDAGVPYQLLESSRLAEVEPALA EVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQIYGVKCG DEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIA ITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQATFWTGLRPMTPD GTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQLLSDLLSGRTPAIPYEDLSVARYSRGFT PLRPGHLHGAHS >gi|296918696|gb|GG773004.1| GENE 105 100695 - 102227 1471 510 aa, chain + ## HITS:1 COG:ECs1683 KEGG:ns NR:ns ## COG: ECs1683 COG2719 # Protein_GI_number: 15830937 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 510 1 510 510 1038 100.0 0 MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAY SSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM AHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALM NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQ ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE GKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWF PDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEE GYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR LWGFDVMLEQQNEDGSVELLERCPPRMGNL >gi|296918696|gb|GG773004.1| GENE 106 102390 - 103109 780 239 aa, chain - ## HITS:1 COG:ECs1682 KEGG:ns NR:ns ## COG: ECs1682 COG2186 # Protein_GI_number: 15830936 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 492 100.0 1e-139 MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGW LTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQH PDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYF ANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQKNLPGDLAIQGR >gi|296918696|gb|GG773004.1| GENE 107 103331 - 104872 1685 513 aa, chain + ## HITS:1 COG:ECs1681 KEGG:ns NR:ns ## COG: ECs1681 COG3067 # Protein_GI_number: 15830935 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 890 99.0 0 MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAGWLLVAEFIFTLAMALK CYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFMVAGIYFMKQLLLFIFTRL LLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRTEDTDLQD DSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGWHFGDFFL RMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKVREVLQQFDDQSRLQRTRQDKIRLI VQAIIGVWLVTALALHLAEVGLIGLSVIILATSLTGVTDEHAIGKAFTESLPFTALLTVF FSVVAVIIDQQLFSPIIQFVLQASEHAQLSLFYIFNGLLSSISDNVFVGTIYINEAKAAM KSGAITLKQYELLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVWMALP YTLVLTLVGLLCVEFTLAPVTEWFMQMGWIATL >gi|296918696|gb|GG773004.1| GENE 108 105018 - 105548 560 176 aa, chain + ## HITS:1 COG:ECs1680 KEGG:ns NR:ns ## COG: ECs1680 COG1495 # Protein_GI_number: 15830934 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 327 98.0 1e-89 MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLCIYERCALFGVLGAALI GAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFATCDFMARFPEWLPLDKWV PQVFVASGDCAERQWEFLGLEMPQWLLGIFIAYLIVAVLVVISQPFKAKKRDLFGR >gi|296918696|gb|GG773004.1| GENE 109 105593 - 106861 428 422 aa, chain - ## HITS:1 COG:umuC KEGG:ns NR:ns ## COG: umuC COG0389 # Protein_GI_number: 16129147 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 422 1 422 422 861 98.0 0 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVHNCRDLTDFG REICATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP VDEVWGIGRRISKKLDAMGIKTVLDLADSDIRFIRKHFNVVLERTVRELRGEPCLQLEEF APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAFN EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHCYQKAGVMLGDFFSQGVAQLNL FDDNAPRPGSEQLMAVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPCYTTRSSDLLR VK >gi|296918696|gb|GG773004.1| GENE 110 106861 - 107280 297 139 aa, chain - ## HITS:1 COG:ECs1678 KEGG:ns NR:ns ## COG: ECs1678 COG1974 # Protein_GI_number: 15830932 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 1 139 1 139 139 256 99.0 1e-68 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLTPMNSAYSPITIS SEDTLDVFGVVIHVVKAMR >gi|296918696|gb|GG773004.1| GENE 111 108074 - 108520 472 148 aa, chain - ## HITS:1 COG:ECs1676 KEGG:ns NR:ns ## COG: ECs1676 COG2983 # Protein_GI_number: 15830930 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 148 11 158 158 300 99.0 5e-82 MSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQC RNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKGLPAWHPLLTGSKAAMHGER ISVRHIAVKESEVIDWQDHILNKPDWAQ >gi|296918696|gb|GG773004.1| GENE 112 108639 - 109298 637 219 aa, chain - ## HITS:1 COG:ECs1675 KEGG:ns NR:ns ## COG: ECs1675 COG0179 # Protein_GI_number: 15830929 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 447 100.0 1e-125 MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLFIKPETALCDLRQPLAI PSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDLTLRDVQGKMKKAGQPWEK AKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEQRQQGTTADMIHKIVPLIAYMSKFF TLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRVL >gi|296918696|gb|GG773004.1| GENE 113 109370 - 109663 275 97 aa, chain - ## HITS:1 COG:ECs1674 KEGG:ns NR:ns ## COG: ECs1674 COG3100 # Protein_GI_number: 15830928 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 97 12 108 108 176 100.0 1e-44 MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMILPLDGRKKLVNADIEKV KQALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK >gi|296918696|gb|GG773004.1| GENE 114 109905 - 110306 293 133 aa, chain + ## HITS:1 COG:no KEGG:ECSE_1225 NR:ns ## KEGG: ECSE_1225 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 133 1 133 133 236 98.0 3e-61 MKIKGISKAVLLLALLTSTSFAAGKNVNVEFRKGHSSAQYSGEIKGYDYDTYTFYAKKGQ KVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRVLQTRNDARK NKTKKYNVDIQIK >gi|296918696|gb|GG773004.1| GENE 115 110426 - 110788 67 120 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1240 NR:ns ## KEGG: ECS88_1240 # Name: ycgJ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 120 3 122 122 238 100.0 6e-62 MMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYICVSSDGISPELTRKYLGEK AAENLQSLQGYDPSEFTFSNGVFCDVKEKLCRDDRYFGVDGKRSGKINQTTTKMLFMCRE >gi|296918696|gb|GG773004.1| GENE 116 111314 - 112009 508 231 aa, chain + ## HITS:1 COG:minC KEGG:ns NR:ns ## COG: minC COG0850 # Protein_GI_number: 16129139 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Escherichia coli K12 # 1 231 1 231 231 440 99.0 1e-123 MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLKHAPVVLNVSALEDPVN WSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGKEKAPRPAPAPQAPAQNTT PVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVYGMMRGRALAGASGD RETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARLQLVENALTVQPLN >gi|296918696|gb|GG773004.1| GENE 117 112033 - 112845 832 270 aa, chain + ## HITS:1 COG:ECs1669 KEGG:ns NR:ns ## COG: ECs1669 COG2894 # Protein_GI_number: 15830923 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Escherichia coli O157:H7 # 1 270 1 270 270 506 100.0 1e-143 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDF VNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCD SPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLL TRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYA DTVERLLGEERPFRFIEEEKKGFLKRLFGG >gi|296918696|gb|GG773004.1| GENE 118 112849 - 113115 463 88 aa, chain + ## HITS:1 COG:ECs1668 KEGG:ns NR:ns ## COG: ECs1668 COG0851 # Protein_GI_number: 15830922 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 148 100.0 2e-36 MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEM VTVQLEQKDGDISILELNVTLPEAEELK >gi|296918696|gb|GG773004.1| GENE 119 113488 - 113748 222 86 aa, chain - ## HITS:1 COG:ECs3515 KEGG:ns NR:ns ## COG: ECs3515 COG3468 # Protein_GI_number: 15832769 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 1 86 1486 1571 1571 161 95.0 3e-40 MRLGNGMEIEPWLKAAVRKEFVDDNRVKVNSDGNFINDLSGRRGIYQAGIKASFSSTLSG HLGVGYSRGAGVESPWNAVVGVNWSF >gi|296918696|gb|GG773004.1| GENE 120 114232 - 114405 117 57 aa, chain + ## HITS:1 COG:no KEGG:E2348C_1290 NR:ns ## KEGG: E2348C_1290 # Name: ymgI # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 1 57 1 57 57 75 100.0 6e-13 MSYFSFEIILIPVKNIIPIITVTLILNYLNNSERSLVKQILIEDEIIVCATYLIPDN >gi|296918696|gb|GG773004.1| GENE 121 114407 - 114751 358 114 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_1978 NR:ns ## KEGG: EcSMS35_1978 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 114 1 114 114 110 100.0 1e-23 MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGA VTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK >gi|296918696|gb|GG773004.1| GENE 122 114761 - 115090 455 109 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_1222 NR:ns ## KEGG: ECDH10B_1222 # Name: ymgD # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 109 1 109 109 195 100.0 4e-49 MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNA SVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK >gi|296918696|gb|GG773004.1| GENE 123 115181 - 115708 510 175 aa, chain - ## HITS:1 COG:b1170 KEGG:ns NR:ns ## COG: b1170 COG3468 # Protein_GI_number: 16129133 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 48 151 220 323 338 190 93.0 1e-48 MRLNDRADETRYIDPVTEQERSSRFWLRQIGGHNAWRDSNGQLRTTSAQAIWMGVDHNVH TEANGSRIENDANNNIQTRLGFHTFIRTQEKNSGPHGDDFEPFVEMNGIHNSKDFAVSIN GVKVEQAGARNLGEIKHGVNGNLNPAASVWGNVGVQLGDNGYNDNAMMVGLKYKF >gi|296918696|gb|GG773004.1| GENE 124 115854 - 116165 214 103 aa, chain - ## HITS:1 COG:b1169 KEGG:ns NR:ns ## COG: b1169 COG3468 # Protein_GI_number: 16129132 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 2 95 180 273 506 164 96.0 5e-41 MGKNAVGVLACSSPGESRTCVDAVDDEVCDSNSYEVISRADLKMNGGSITTNGINSYGAY ANGKKAYINLDYVVLETVADGSYAVAIRQGNIDIKKFYYNKWH >gi|296918696|gb|GG773004.1| GENE 125 116299 - 116451 74 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315288537|gb|EFU47935.1| ## NR: gi|315288537|gb|EFU47935.1| hypothetical protein HMPREF9539_01497 [Escherichia coli MS 110-3] # 1 50 1 50 50 89 100.0 1e-16 MVPPNSLTTALAVIPPFSLSDTLSERLNIAIAYIILCFGYQQKYHKIHHH >gi|296918696|gb|GG773004.1| GENE 126 116519 - 116698 168 59 aa, chain - ## HITS:1 COG:b1169 KEGG:ns NR:ns ## COG: b1169 COG3468 # Protein_GI_number: 16129132 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 1 59 1 59 506 93 86.0 1e-19 MKLKKLPGFSLGLIALAVGNAYVTQLLDIYSIISYITDEESPIEIKNNTSTSNGEYLIT >gi|296918696|gb|GG773004.1| GENE 127 117096 - 117314 79 72 aa, chain - ## HITS:1 COG:no KEGG:ECP_1206 NR:ns ## KEGG: ECP_1206 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 72 13 84 84 112 100.0 7e-24 MNNSNNLDYFTLYIIFSIAFMLITLLVILIAKPSTGLGEVLVTINLLNALVWLAINLVNR LRERLVSHRDQH >gi|296918696|gb|GG773004.1| GENE 128 117446 - 118126 363 226 aa, chain - ## HITS:1 COG:ycgG_2 KEGG:ns NR:ns ## COG: ycgG_2 COG2200 # Protein_GI_number: 16129131 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 1 226 46 271 271 445 96.0 1e-125 MLARWKQPHGGYISPAAFIPLAEKCGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINF SASHIISPTFVDECLNYRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIAL DDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPASTRILDCVLDLARKLSISIVAEDV ETKEQFDYLNQNNITFQQGYYFYKPVTYIDLVKIILSKPKVKIVVE >gi|296918696|gb|GG773004.1| GENE 129 118637 - 118813 249 58 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1228 NR:ns ## KEGG: ECS88_1228 # Name: ymgC # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 58 25 82 82 97 100.0 2e-19 MTHGYVDSHIIAQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVLS >gi|296918696|gb|GG773004.1| GENE 130 118998 - 119264 223 88 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1227 NR:ns ## KEGG: ECS88_1227 # Name: ymgB # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 88 1 88 88 134 100.0 1e-30 MLEDTTIHNAISDKALSSYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS LETTSDILKADVIRKTLEIVLRYTADDM >gi|296918696|gb|GG773004.1| GENE 131 119608 - 119844 218 78 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1225 NR:ns ## KEGG: ECS88_1225 # Name: ycgZ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 78 1 78 78 143 100.0 3e-33 MHQNSVTSDSAGAITRYFAKANLPTQQETLGEIVTEILKDGRNLSRKSLCAKLLCRLEQA TGEEEQKHYNALIGLLFE >gi|296918696|gb|GG773004.1| GENE 132 120158 - 121369 555 403 aa, chain + ## HITS:1 COG:ycgF_2 KEGG:ns NR:ns ## COG: ycgF_2 COG2200 # Protein_GI_number: 16129126 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 161 403 1 243 243 462 95.0 1e-130 MLTTLIYRSHIRGDEPVKKIEEMVSIANRRNMRSDVTGILLFNGSHFFQLLEGPEEQVQM IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCTLSSNINDHFAFHPIV DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDEEIYTADLKSKALAFAMAHALKLGDKMIS INLLPMTLVNKPDAVSFLLDEIKANALVPEQIIVEFTESEVISRFDEFAEAVKSLKAAGI SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIMKCCTSLEIQVS AMGVATPEEWMWLESAGIEMFQGDLFSKAKLNGIPSVAWPEKK >gi|296918696|gb|GG773004.1| GENE 133 121574 - 122305 369 243 aa, chain + ## HITS:1 COG:ycgE KEGG:ns NR:ns ## COG: ycgE COG0789 # Protein_GI_number: 16129125 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 243 1 243 243 472 98.0 1e-133 MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNG VPVGKVKALLETTSQDTQDDWNRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHV YLPVRQRLVLDHNTSRIMSSMFDGALIEYAAASLFEMRRKPGKEAILMAWNVEERARLWL EAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIF HAP >gi|296918696|gb|GG773004.1| GENE 134 122526 - 122930 106 134 aa, chain + ## HITS:1 COG:ycgX KEGG:ns NR:ns ## COG: ycgX COG5562 # Protein_GI_number: 16129124 # Func_class: R General function prediction only # Function: Phage envelope protein # Organism: Escherichia coli K12 # 1 134 1 134 134 259 99.0 1e-69 MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR NLLKVSTTKNPAKIKEAALLHIRGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT LLYIEDVENNKPLI >gi|296918696|gb|GG773004.1| GENE 135 123778 - 124164 282 128 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1442 NR:ns ## KEGG: ECUMN_1442 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 128 129 256 256 239 100.0 2e-62 MLDGLKDLECEIAMISSEFEIEKHSMHYFYMIFDIERYINDCSYFVFSAAKVVKGVIQCI GYIDKNNKASCDEFYSGSYECLDDDQETLNYLNESCAEGIDADKDLIRKNELLALSLKEL YQLLVSKK >gi|296918696|gb|GG773004.1| GENE 136 125235 - 126149 764 304 aa, chain + ## HITS:1 COG:STM2861 KEGG:ns NR:ns ## COG: STM2861 COG0803 # Protein_GI_number: 16766167 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Salmonella typhimurium LT2 # 1 304 4 304 305 469 75.0 1e-132 MHSIKKVTMLLGGLALTCSIAFQASATEKFKVITTFTIIADMAKNVAGDAAEVSSITKPG AEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNGVPEVIVSSGVTPVGITEG PYEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQRNADTYKAKITQTLAPLRKQ ITELPENQRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRKVVDIVKKNHIPA VFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYIDLLKVTTSTLVQGIKAG KREK >gi|296918696|gb|GG773004.1| GENE 137 126152 - 126976 237 274 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 235 7 238 318 95 26 9e-19 MQSAGIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKAIMGFVRLTS GKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGMLRIAKKRDRQ IVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQGDVILLDEPFTGVDVKTEAKI ISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGTVLASGPTDTTFTAENLELAFSGV LRHVTLNGSEESIITDDERPFVAHRPSAVQREER >gi|296918696|gb|GG773004.1| GENE 138 126973 - 127830 781 285 aa, chain + ## HITS:1 COG:STM2863 KEGG:ns NR:ns ## COG: STM2863 COG1108 # Protein_GI_number: 16766169 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 277 1 277 286 426 87.0 1e-119 MNALLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYML GLPFSLGAFFSGGLAAGSMLFLNQLTRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQT IVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFFDENHARAIGLHPGRLKILFF TLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVTIGSVTSFLGAWVSY FLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRRAHKALEDRS >gi|296918696|gb|GG773004.1| GENE 139 127827 - 128684 414 285 aa, chain + ## HITS:1 COG:STM2864 KEGG:ns NR:ns ## COG: STM2864 COG1108 # Protein_GI_number: 16766170 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 2 272 3 273 282 324 68.0 9e-89 MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVQKGWALMGDAMSHAVFPGIVLAWI LGLPLATGAFVAGVFCAVATGYLKDNSRIKQDTVMGIVFSGMFAAGLILYIAVKPDVHLD HILFGDMLGITIGDIIQTMIIAGLVTLVISVKWRDFLLFSFDYQQAQVSGLHTRWLHYGL LCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRFHIALLLATGISVIVSMTGVWLS FFIDSAPAPTIVVLFAVLFIMTFAVTSIHARKKGNSHTQDLLSPN >gi|296918696|gb|GG773004.1| GENE 140 128776 - 129069 228 97 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1437 NR:ns ## KEGG: ECUMN_1437 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 97 1 97 97 185 100.0 5e-46 MDISPLLHALCAVAAQILVGLFTGNWAYGAIAGCTFFIAREHTQAEYRWIEMFGHGKRMN MPWWGGFDPRAWDVASLMDFAVPVVACLLVWLLVNRG >gi|296918696|gb|GG773004.1| GENE 141 129082 - 129360 328 92 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1212 NR:ns ## KEGG: ECS88_1212 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 92 1 92 92 164 100.0 1e-39 MKDLTLKFHDKLQFKAFLSSLDWEEDEDLQNKLLVDEIGFTYTETGVTEEGEPVCVRNDG YFVNIRILDDLFDVSVFSDYVVELETPLREWS >gi|296918696|gb|GG773004.1| GENE 142 129357 - 131417 787 686 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1211 NR:ns ## KEGG: ECS88_1211 # Name: not_defined # Def: side tail fiber protein homolog from lambdoid prophage # Organism: E.coli_S88 # Pathway: not_defined # 1 686 3 688 688 1201 100.0 0 MAVQISGVLKDGAGKPIQNCTIQLKAKRNSTTVVVNTVASENPDEAGRYSMDVEYGQYSV ILLVEGFPPSHAGAITVYEDSKPGTLNDFLGAATEDDVRPEALYRFEKMVEEVARNAEAA SQSAAAAKKSETAAASSRNAAKTSETNAGNSAKAAASSKTAAQNAATAAERSETNARASE EASADSEEASRRNAESAAENAGVATTKAREAAADATKAGQKKDEALSAATRAEKAADRAE VAAEVTAEPYANIVPPLPDVWIPFNDSLDMIAGFSPGYKKIAIGDDVVQVASDKQVNFSR ASTATYINKSGELKTAEINEPRFECDGLLIEGQRTNYMLNSESPASWGKSSNMDVPETGT DSFGFTYGKFVCNDSLVGQTSAINMASIAATKSVDVSGDNKYVTTSCRFKTERQVRLRIR FDKYDGSATTFLGDAYIDTQTLEINMTGGAAGRITARVRKDKTTGWIFAEATIQAIDGEL KIGSQIQYSPERGGATVSGDYIYLATPQVENGPCVSSFIISGGSATTRASDLVSIPTRNN LYKLPFTFLLEIHKNWDIAPNAAPRVWDIAAANTGQSAIAAINRGSGKLYMSLSNPSGLY VNSAATDVFAEKTTFGCIAKADGHFHVVTNGKAVNEVYCEYNGVTADKNIRFGGQTNTGE RHLFGHIRNFRIWHKELNDRQLKEVV >gi|296918696|gb|GG773004.1| GENE 143 131498 - 132313 434 271 aa, chain - ## HITS:1 COG:ECs1648 KEGG:ns NR:ns ## COG: ECs1648 COG4733 # Protein_GI_number: 15830902 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 271 862 1132 1132 430 77.0 1e-120 MWAVKLQQMQDGRLYIAGIGAGVENTPDGMQSQVLLAADRIAMINPANGNTKPMFVGQGD QIFMNEVFLKYLTAPTITSGGNPPTFSLTPDGRLSAKNADISGNVNANSGTLNNVTINQN CRILGKLSANQIEGDIVKTVGKAFPRNGSYASGTITVTVYDDQAFDRQIVVPPVLFRGGK HENFNSNNQQSYWYSTCKLQVLKNGQEIFQQPATDVSRVFSSVIDMPAGHGHVTLTFNVS SYGANNWTPTTSISDLLVVVMKKSTAGISIS >gi|296918696|gb|GG773004.1| GENE 144 132743 - 133327 322 194 aa, chain - ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 50 194 103 247 247 274 95.0 6e-74 MAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNS DEASWHLVEDHRGKTVYDVASGDELFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEA EKMFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEETSLLEAWKKYRVLLNRVDTS TAPDIEWPANPVRE >gi|296918696|gb|GG773004.1| GENE 145 133327 - 135069 673 580 aa, chain - ## HITS:1 COG:STM4200 KEGG:ns NR:ns ## COG: STM4200 COG5301 # Protein_GI_number: 16767450 # Func_class: R General function prediction only # Function: Phage-related tail fibre protein # Organism: Salmonella typhimurium LT2 # 5 179 167 372 581 104 48.0 5e-22 MALEDASTTKKGIVQLSSATNSTSESLAATPKAVKAAYELANGKYTAQDATTAQKGIVQL SNATNSTSEMLAATPKSVKAAYDLANGKYTAQDATTAQKGIVQLSSATNSTSEMLAATPK SVKAAYDLANGKYTAQDATTAQKGIVQLSSATNSASETLAATPKAVKAANNNANGRVPSA RKVNGKALSADITLTPKDIGTLNSTTMSFSGGAGWFKLATVTMPQASSVVSITLIGGAGF NVGSPQQAGISELVLRAGNGNPKGITGALWQRTSTGFTNFAWVNTSGDTYDIYVAIGNYA TGVNIQWDYTSNASVTIHTSPAYSANKPEGLTDGTVYSLYTPSEQFYPPGAPIPWPSDTV PSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTH SASASSTDLGTKNTSSFDYGTKSTNNTGAHTHSLSGSTGSAGDHTHGNGIRWPGGGGSAL AFYDGGGFTYVQDSQYQVSPGTSSRRSYYQRIQTQSAGAHTHSLSGTAASSGAHAHTVGI GAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA >gi|296918696|gb|GG773004.1| GENE 146 135200 - 135937 473 245 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_1641 NR:ns ## KEGG: ECH74115_1641 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 245 1 245 245 128 92.0 3e-28 MALPFAADACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVLDVFAAEADL AAALACTAASPAFVVAVEADDAALSADFPAAVALAEACPALVDAALADNAAAVFESAAAE ALCPAAVSEDLAFVSDVFAAFAEFAAAVAEEAALLALEAAFVSDDFAASFEADASRAEVA ASDAFVVAVDAEVAADCCDAAAFVSDVFAALALVAAALFDDSAAAALFAASRAFVDAVPA LEDAD >gi|296918696|gb|GG773004.1| GENE 147 136586 - 137185 455 199 aa, chain - ## HITS:1 COG:ECs0843 KEGG:ns NR:ns ## COG: ECs0843 COG3637 # Protein_GI_number: 15830097 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Escherichia coli O157:H7 # 1 199 1 199 199 346 90.0 1e-95 MRKVCAVILSAAICLSVSGAPAWASEHQSTLSAGYLHARTNAPGSDNLNGINVKYRYEFT DALGLITSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYSMAGVA YSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVTIDLAYEG SGSGDWRTDAFIVGIGYRF >gi|296918696|gb|GG773004.1| GENE 148 137253 - 137906 375 217 aa, chain - ## HITS:1 COG:ECs2943 KEGG:ns NR:ns ## COG: ECs2943 COG4733 # Protein_GI_number: 15832197 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 217 559 775 775 427 96.0 1e-120 MFVGQGDQIFMNDVFLKRLTAPTITSGGNPPAFSLTPDGRLTAKNADISGNVNANSGTLN NVTINENCRVLGKLSANQIEGDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPFDRQI VIPAVAFSGAKHERENNDIYSSCRLIVRKNGAEIYNRTALDNTLIYSGVIDMPAGRGHMT LEFSVSAWLVNNWYPTASISDLLVVVMKKATAGISIS >gi|296918696|gb|GG773004.1| GENE 149 137942 - 138391 160 149 aa, chain - ## HITS:1 COG:ECs2943 KEGG:ns NR:ns ## COG: ECs2943 COG4733 # Protein_GI_number: 15832197 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 149 408 556 775 288 97.0 2e-78 MNTVGKSAFVEAVGRASDDAEGYLDFFKGEIGKTHLAQELWTQIDNGQLAPDLAEIRTSI TNVSNEITQTVNKKLEDQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMKDGRLYIAGIGAG IENTPAGMQSQVLLAADRIAMINPANGNT >gi|296918696|gb|GG773004.1| GENE 150 138841 - 139320 424 159 aa, chain - ## HITS:1 COG:ECs0842 KEGG:ns NR:ns ## COG: ECs0842 COG4733 # Protein_GI_number: 15830096 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 159 462 620 1137 303 95.0 8e-83 MDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLDREITLPSSGTPLI SLVDGQGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIRENDD GTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPS Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:53:36 2011 Seq name: gi|296918695|gb|GG773005.1| Escherichia coli MS 110-3 genomic scaffold Scfld166, whole genome shotgun sequence Length of sequence - 160816 bp Number of predicted genes - 145, with homology - 145 Number of transcription units - 89, operones - 25 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 7/0.125 - CDS 735 - 2432 1527 ## COG4232 Thiol:disulfide interchange protein 3 1 Op 3 5/0.275 - CDS 2408 - 2746 256 ## COG1324 Uncharacterized protein involved in tolerance to divalent cations - Prom 2804 - 2863 3.7 4 2 Tu 1 . - CDS 2923 - 4224 1388 ## COG2704 Anaerobic C4-dicarboxylate transporter - Prom 4247 - 4306 3.5 - Term 4281 - 4318 6.2 5 3 Tu 1 . - CDS 4342 - 5778 1500 ## COG1027 Aspartate ammonia-lyase - Prom 5936 - 5995 5.3 + Prom 5999 - 6058 4.0 6 4 Tu 1 . + CDS 6115 - 6591 332 ## COG3030 Protein affecting phage T7 exclusion by the F plasmid 7 5 Tu 1 . - CDS 6607 - 7863 1017 ## COG0531 Amino acid transporters - Prom 7907 - 7966 1.8 + Prom 7960 - 8019 6.0 8 6 Op 1 41/0.000 + CDS 8139 - 8432 472 ## COG0234 Co-chaperonin GroES (HSP10) 9 6 Op 2 . + CDS 8476 - 10122 2383 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 10152 - 10189 6.0 + Prom 10150 - 10209 3.8 10 7 Tu 1 . + CDS 10260 - 10613 337 ## ECIAI1_4377 hypothetical protein 11 8 Tu 1 . - CDS 10663 - 11532 794 ## ECS88_4731 hypothetical protein - Prom 11656 - 11715 5.6 12 9 Tu 1 . - CDS 11767 - 12795 878 ## COG1509 Lysine 2,3-aminomutase - Prom 12840 - 12899 3.3 + Prom 12734 - 12793 3.7 13 10 Tu 1 . + CDS 12837 - 13403 669 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 13410 - 13450 10.5 + Prom 13610 - 13669 4.2 14 11 Tu 1 . + CDS 13691 - 13837 111 ## COG5510 Predicted small secreted protein + Term 13845 - 13882 6.2 + Prom 13878 - 13937 4.1 15 12 Tu 1 . + CDS 14013 - 14330 423 ## COG2076 Membrane transporters of cations and cationic drugs 16 13 Tu 1 3/0.525 - CDS 14327 - 14860 690 ## COG3040 Bacterial lipocalin - Prom 14881 - 14940 2.0 - Term 14909 - 14938 2.1 17 14 Op 1 3/0.525 - CDS 14949 - 16082 884 ## COG1680 Beta-lactamase class C and other penicillin binding proteins - Term 16092 - 16125 -0.9 18 14 Op 2 10/0.100 - CDS 16145 - 16504 455 ## COG3080 Fumarate reductase subunit D 19 14 Op 3 10/0.100 - CDS 16515 - 16910 476 ## COG3029 Fumarate reductase subunit C 20 14 Op 4 36/0.000 - CDS 16921 - 17655 854 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 21 14 Op 5 . - CDS 17648 - 19456 1945 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 19621 - 19680 3.4 + Prom 19579 - 19638 7.1 22 15 Tu 1 . + CDS 19781 - 20758 872 ## COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) + Term 20791 - 20819 -1.0 + Prom 20797 - 20856 3.9 23 16 Op 1 . + CDS 21022 - 22479 1358 ## COG0531 Amino acid transporters + Term 22498 - 22532 3.6 24 16 Op 2 . + CDS 22542 - 22856 206 ## ECS88_4745 hypothetical protein 25 16 Op 3 . + CDS 22853 - 23167 239 ## ECS88_4746 hypothetical protein - Term 23069 - 23107 -0.1 26 17 Op 1 5/0.275 - CDS 23198 - 26521 3512 ## COG3264 Small-conductance mechanosensitive channel 27 17 Op 2 2/0.775 - CDS 26543 - 27511 988 ## COG0688 Phosphatidylserine decarboxylase - Prom 27542 - 27601 2.2 28 17 Op 3 . - CDS 27608 - 28660 974 ## COG1162 Predicted GTPases - Prom 28740 - 28799 2.7 + Prom 28653 - 28712 1.9 29 18 Tu 1 . + CDS 28755 - 29300 756 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) + Term 29533 - 29601 30.4 + TRNA 29511 - 29586 93.7 # Gly GCC 0 0 + TRNA 29622 - 29697 93.7 # Gly GCC 0 0 30 19 Tu 1 . - CDS 29967 - 31106 870 ## COG1600 Uncharacterized Fe-S protein - Prom 31131 - 31190 4.9 31 20 Tu 1 6/0.175 + CDS 31120 - 32601 1008 ## PROTEIN SUPPORTED gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 + Term 32612 - 32662 2.1 32 21 Op 1 13/0.050 + CDS 32734 - 33195 509 ## COG0802 Predicted ATPase or kinase 33 21 Op 2 10/0.100 + CDS 33214 - 34551 999 ## COG0860 N-acetylmuramoyl-L-alanine amidase 34 21 Op 3 12/0.050 + CDS 34561 - 36408 1765 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 35 21 Op 4 15/0.000 + CDS 36446 - 37351 468 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 36 21 Op 5 16/0.000 + CDS 37437 - 37745 306 ## COG1923 Uncharacterized host factor I protein + Term 37766 - 37811 6.2 37 21 Op 6 8/0.100 + CDS 37821 - 39101 737 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 38 21 Op 7 21/0.000 + CDS 39187 - 40446 1455 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 39 21 Op 8 11/0.050 + CDS 40449 - 41453 1306 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Term 41483 - 41521 6.5 40 22 Tu 1 6/0.175 + CDS 41535 - 41732 236 ## COG3242 Uncharacterized protein conserved in bacteria + Prom 41753 - 41812 4.0 41 23 Tu 1 . + CDS 41836 - 43134 1508 ## COG0104 Adenylosuccinate synthase + Prom 43260 - 43319 3.9 42 24 Op 1 2/0.775 + CDS 43411 - 43764 234 ## COG1959 Predicted transcriptional regulator 43 24 Op 2 7/0.125 + CDS 43803 - 46244 1250 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 + Term 46248 - 46288 9.1 44 25 Tu 1 4/0.375 + CDS 46336 - 47067 455 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 + Term 47082 - 47123 7.4 + Prom 47105 - 47164 6.8 45 26 Op 1 6/0.175 + CDS 47194 - 47595 386 ## COG3789 Uncharacterized protein conserved in bacteria 46 26 Op 2 . + CDS 47614 - 48312 954 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription + Term 48317 - 48355 6.1 47 26 Op 3 . + CDS 48362 - 49021 735 ## ECS88_4769 hypothetical protein 48 26 Op 4 5/0.275 + CDS 49039 - 49437 415 ## COG3766 Predicted membrane protein 49 26 Op 5 5/0.275 + CDS 49447 - 50085 345 ## COG5463 Predicted integral membrane protein 50 26 Op 6 1/0.925 + CDS 50088 - 51251 984 ## COG0754 Glutathionylspermidine synthase 51 26 Op 7 . + CDS 51335 - 52960 1155 ## COG1960 Acyl-CoA dehydrogenases 52 27 Tu 1 . - CDS 53077 - 53364 269 ## SSON_4370 hypothetical protein - Prom 53438 - 53497 4.2 53 28 Tu 1 . - CDS 53501 - 53830 211 ## APECO1_2203 putative biofilm stress and motility protein A - Prom 53857 - 53916 2.6 + Prom 53795 - 53854 3.7 54 29 Tu 1 . + CDS 54012 - 54761 559 ## COG1073 Hydrolases of the alpha/beta superfamily 55 30 Tu 1 . - CDS 54758 - 55513 854 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 55538 - 55597 3.6 - Term 55558 - 55612 10.0 56 31 Tu 1 . - CDS 55621 - 56685 1155 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 56932 - 56991 4.8 + Prom 56909 - 56968 5.2 57 32 Op 1 11/0.050 + CDS 57040 - 58437 1741 ## COG3037 Uncharacterized protein conserved in bacteria 58 32 Op 2 13/0.050 + CDS 58453 - 58758 367 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 59 32 Op 3 8/0.100 + CDS 58768 - 59232 645 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 60 32 Op 4 9/0.100 + CDS 59246 - 59896 884 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 61 32 Op 5 8/0.100 + CDS 59906 - 60760 1001 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 62 32 Op 6 . + CDS 60760 - 61446 723 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Term 61653 - 61677 -1.0 - Term 61504 - 61534 3.0 63 33 Tu 1 . - CDS 61575 - 61850 295 ## ECO111_5015 hypothetical protein - Prom 61903 - 61962 3.1 + Prom 62027 - 62086 2.9 64 34 Tu 1 . + CDS 62178 - 62573 680 ## PROTEIN SUPPORTED gi|221800783|ref|NP_418621.2| 30S ribosomal subunit protein S6 + Term 62700 - 62744 0.3 65 35 Op 1 27/0.000 + CDS 62899 - 63126 385 ## PROTEIN SUPPORTED gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 66 35 Op 2 . + CDS 63168 - 63617 720 ## PROTEIN SUPPORTED gi|15804792|ref|NP_290833.1| 50S ribosomal protein L9 + Term 63643 - 63694 4.0 + Prom 63856 - 63915 9.8 67 36 Op 1 . + CDS 64039 - 64530 262 ## ECS88_4790 hypothetical protein 68 36 Op 2 . + CDS 64533 - 65801 633 ## COG3550 Uncharacterized protein related to capsule biosynthesis enzymes + Term 65861 - 65896 1.2 - Term 65887 - 65933 9.0 69 37 Op 1 . - CDS 65944 - 67221 1049 ## COG0477 Permeases of the major facilitator superfamily 70 37 Op 2 . - CDS 67314 - 69386 1320 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 71 37 Op 3 3/0.525 - CDS 69383 - 70924 1759 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase 72 37 Op 4 1/0.925 - CDS 70934 - 71710 762 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 73 37 Op 5 . - CDS 71713 - 72561 663 ## COG1082 Sugar phosphate isomerases/epimerases 74 37 Op 6 . - CDS 72571 - 73362 935 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Prom 73353 - 73412 4.5 75 38 Tu 1 . + CDS 73574 - 74221 507 ## COG1309 Transcriptional regulator + Term 74285 - 74326 2.1 76 39 Tu 1 . - CDS 74205 - 74843 515 ## COG3061 Cell envelope opacity-associated protein A - Prom 74868 - 74927 2.8 + Prom 74931 - 74990 4.9 77 40 Tu 1 . + CDS 75061 - 75681 976 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Prom 75723 - 75782 4.9 78 41 Tu 1 . + CDS 75990 - 77402 1523 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 77415 - 77452 8.2 79 42 Tu 1 . - CDS 77447 - 78109 889 ## COG2846 Regulator of cell morphogenesis and NO signaling - Prom 78136 - 78195 6.5 80 43 Tu 1 . - CDS 78217 - 79182 1008 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 81 44 Tu 1 . - CDS 79290 - 80150 891 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases - Prom 80224 - 80283 3.0 82 45 Tu 1 . + CDS 80149 - 80619 458 ## COG1733 Predicted transcriptional regulators + Term 80688 - 80728 4.2 - Term 80498 - 80537 3.2 83 46 Tu 1 . - CDS 80748 - 82691 2228 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 82741 - 82800 5.1 + Prom 82785 - 82844 4.3 84 47 Tu 1 . + CDS 82881 - 83621 784 ## COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase + Term 83630 - 83667 5.1 85 48 Tu 1 . - CDS 83611 - 84168 687 ## COG3054 Predicted transcriptional regulator - Prom 84342 - 84401 5.4 + Prom 84282 - 84341 5.0 86 49 Tu 1 . + CDS 84493 - 84699 256 ## G2583_5047 hypothetical protein + Term 84741 - 84773 6.3 - Term 84729 - 84761 6.3 87 50 Tu 1 . - CDS 84777 - 86120 1506 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 86224 - 86283 2.0 - Term 86181 - 86217 1.5 88 51 Tu 1 . - CDS 86443 - 87081 723 ## COG0225 Peptide methionine sulfoxide reductase - Prom 87180 - 87239 3.3 + Prom 87096 - 87155 2.8 89 52 Op 1 16/0.000 + CDS 87287 - 89020 1557 ## COG0729 Outer membrane protein 90 52 Op 2 6/0.175 + CDS 89017 - 92796 4009 ## COG2911 Uncharacterized protein conserved in bacteria 91 52 Op 3 . + CDS 92799 - 93140 214 ## COG2105 Uncharacterized conserved protein + Term 93161 - 93219 24.3 92 53 Tu 1 . - CDS 93558 - 94088 764 ## COG0221 Inorganic pyrophosphatase - Prom 94294 - 94353 3.6 + Prom 94237 - 94296 4.5 93 54 Op 1 16/0.000 + CDS 94398 - 95354 1213 ## COG1879 ABC-type sugar transport system, periplasmic component + Prom 95406 - 95465 2.7 94 54 Op 2 21/0.000 + CDS 95494 - 96996 204 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 95 54 Op 3 11/0.050 + CDS 97010 - 98032 1179 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 96 54 Op 4 . + CDS 98043 - 99014 1019 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components + Term 99027 - 99058 2.7 97 55 Tu 1 . - CDS 99074 - 100072 1135 ## COG0158 Fructose-1,6-bisphosphatase - Prom 100128 - 100187 2.2 + Prom 100020 - 100079 4.9 98 56 Tu 1 . + CDS 100248 - 101621 1721 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Term 101671 - 101722 5.9 - Term 101591 - 101636 3.1 99 57 Tu 1 . - CDS 101779 - 102330 748 ## COG3028 Uncharacterized protein conserved in bacteria - Prom 102350 - 102409 7.1 + Prom 102321 - 102380 3.1 100 58 Op 1 . + CDS 102424 - 103776 1410 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs + Prom 103879 - 103938 2.4 101 58 Op 2 . + CDS 103960 - 104346 509 ## COG3783 Soluble cytochrome b562 + Term 104355 - 104398 11.7 - Term 104273 - 104319 -0.9 102 59 Tu 1 . - CDS 104391 - 104855 406 ## COG0602 Organic radical activating enzymes - Prom 104919 - 104978 6.8 - Term 104893 - 104937 4.1 103 60 Tu 1 . - CDS 105013 - 107151 2491 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 107330 - 107389 6.5 - Term 107495 - 107532 4.4 104 61 Op 1 9/0.100 - CDS 107545 - 109200 1386 ## COG0366 Glycosidases 105 61 Op 2 7/0.125 - CDS 109250 - 110668 1520 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 110720 - 110779 4.4 - Term 110724 - 110750 -1.0 106 62 Tu 1 . - CDS 110790 - 111737 767 ## COG1609 Transcriptional regulators - Prom 111771 - 111830 6.9 107 63 Tu 1 . + CDS 112116 - 114812 2635 ## COG0474 Cation transport ATPase + Term 114935 - 114971 2.4 108 64 Tu 1 6/0.175 - CDS 115018 - 115404 537 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 115425 - 115484 19.3 - Term 115423 - 115465 10.4 109 65 Op 1 19/0.000 - CDS 115500 - 115961 441 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 110 65 Op 2 . - CDS 115974 - 116909 1074 ## COG0540 Aspartate carbamoyltransferase, catalytic chain - Prom 116932 - 116991 8.5 - Term 116931 - 116973 16.1 111 66 Tu 1 . - CDS 117183 - 117671 232 ## COG1438 Arginine repressor - Prom 117692 - 117751 7.4 112 67 Op 1 3/0.525 - CDS 117787 - 119190 1190 ## COG1288 Predicted membrane protein 113 67 Op 2 8/0.100 - CDS 119247 - 120251 943 ## COG0078 Ornithine carbamoyltransferase 114 67 Op 3 2/0.775 - CDS 120262 - 121206 877 ## COG0549 Carbamate kinase 115 67 Op 4 . - CDS 121217 - 122437 630 ## PROTEIN SUPPORTED gi|148988789|ref|ZP_01820204.1| 50S ribosomal protein L33 + Prom 122847 - 122906 5.1 116 68 Tu 1 . + CDS 123115 - 123567 502 ## COG2731 Beta-galactosidase, beta subunit 117 69 Tu 1 . - CDS 123613 - 124617 1012 ## COG0078 Ornithine carbamoyltransferase - Prom 124651 - 124710 6.0 + Prom 124603 - 124662 4.6 118 70 Tu 1 . + CDS 124779 - 125195 774 ## COG3076 Uncharacterized protein conserved in bacteria + Term 125248 - 125283 -0.7 119 71 Tu 1 . - CDS 125384 - 125887 491 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 125917 - 125976 2.7 + Prom 125862 - 125921 4.2 120 72 Tu 1 . + CDS 126080 - 127267 799 ## COG4269 Predicted membrane protein + Term 127334 - 127375 1.5 - Term 127265 - 127306 9.7 121 73 Op 1 5/0.275 - CDS 127307 - 130090 3292 ## COG0525 Valyl-tRNA synthetase 122 73 Op 2 12/0.050 - CDS 130090 - 130533 430 ## COG2927 DNA polymerase III, chi subunit - Prom 130615 - 130674 6.1 - Term 130567 - 130602 3.2 123 74 Tu 1 . - CDS 130791 - 132302 1707 ## COG0260 Leucyl aminopeptidase - Prom 132461 - 132520 5.4 + Prom 132482 - 132541 3.8 124 75 Op 1 22/0.000 + CDS 132590 - 133669 998 ## COG0795 Predicted permeases 125 75 Op 2 . + CDS 133669 - 134751 1457 ## COG0795 Predicted permeases + Term 134765 - 134800 6.0 - Term 134753 - 134788 6.0 126 76 Op 1 1/0.925 - CDS 134912 - 136414 1377 ## COG0433 Predicted ATPase 127 76 Op 2 2/0.775 - CDS 136492 - 137490 752 ## COG1609 Transcriptional regulators 128 76 Op 3 5/0.275 - CDS 137557 - 138876 1267 ## COG2610 H+/gluconate symporter and related permeases - Term 138893 - 138923 3.0 129 77 Op 1 10/0.100 - CDS 138941 - 139705 839 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 130 77 Op 2 . - CDS 139729 - 140760 871 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 140853 - 140912 11.5 + Prom 140892 - 140951 3.7 131 78 Tu 1 . + CDS 140977 - 141540 410 ## COG3265 Gluconate kinase - Term 141498 - 141534 3.0 132 79 Tu 1 . - CDS 141544 - 142563 1195 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 142787 - 142846 80.3 + TRNA 142759 - 142843 79.1 # Leu CAA 0 0 133 80 Op 1 . - CDS 142993 - 143919 760 ## COG0582 Integrase 134 80 Op 2 . - CDS 143909 - 145528 828 ## EC55989_4900 hypothetical protein - Prom 145712 - 145771 2.5 - Term 145782 - 145818 7.1 135 81 Op 1 . - CDS 145831 - 146742 623 ## COG4227 Antirestriction protein 136 81 Op 2 . - CDS 146828 - 147121 272 ## EC55989_4902 hypothetical protein - Prom 147300 - 147359 2.7 137 82 Tu 1 . - CDS 147489 - 148361 706 ## COG3440 Predicted restriction endonuclease - Prom 148390 - 148449 3.1 - Term 148527 - 148587 6.3 138 83 Op 1 . - CDS 148606 - 150429 389 ## Sbal195_0370 hypothetical protein 139 83 Op 2 . - CDS 150422 - 152926 253 ## Sbal195_0371 histidine kinase - Prom 152963 - 153022 2.5 140 84 Tu 1 . - CDS 153485 - 154681 -26 ## COG0270 Site-specific DNA methylase - Prom 154863 - 154922 9.2 - Term 154891 - 154938 12.2 141 85 Tu 1 . - CDS 154954 - 155454 -106 ## gi|237703956|ref|ZP_04534437.1| predicted protein 142 86 Tu 1 . + CDS 155488 - 156525 553 ## COG3335 Transposase and inactivated derivatives 143 87 Tu 1 . + CDS 158053 - 158349 127 ## ROD_33711 putative transcriptional regulator 144 88 Tu 1 . + CDS 159807 - 160118 209 ## COG3177 Uncharacterized conserved protein + Term 160153 - 160185 4.0 145 89 Tu 1 . - CDS 160169 - 160798 222 ## EC55989_4913 hypothetical protein Predicted protein(s) >gi|296918695|gb|GG773005.1| GENE 1 123 - 698 806 191 aa, chain - ## HITS:1 COG:ECs5116 KEGG:ns NR:ns ## COG: ECs5116 COG1309 # Protein_GI_number: 15834370 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 191 9 199 199 368 99.0 1e-102 MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQI DVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQ QKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILR FARCRQGGALT >gi|296918695|gb|GG773005.1| GENE 2 735 - 2432 1527 565 aa, chain - ## HITS:1 COG:dsbD KEGG:ns NR:ns ## COG: dsbD COG4232 # Protein_GI_number: 16131961 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Escherichia coli K12 # 1 565 1 565 565 1096 98.0 0 MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFAFDFQQNQHDLNLTWQIKDGYYL YRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTLPVTINQASAGATLTVTYQ GCADAGFCYPPETKTVPLSEVVANNEASQPVSVPQQEQPTAQLPFSALWALLIGIGIAFT PCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMALTYTALGLVVAAAGLQFQAALQ HPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFIMGAIAGLI CSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYALGMGLPLMLITVFGNRLLPKSGPWMEQ VKTAFGFVILALPVFLLERVIGDIWGLRLWSALGVAFFGWAFITSLQAKRGWMRVVQIIL LAAALVSVRPLQDWAFGETHTAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWC VACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQ EHPQARVTGFMDAETFSAHLRDRQP >gi|296918695|gb|GG773005.1| GENE 3 2408 - 2746 256 112 aa, chain - ## HITS:1 COG:ECs5118 KEGG:ns NR:ns ## COG: ECs5118 COG1324 # Protein_GI_number: 15834372 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tolerance to divalent cations # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 197 99.0 4e-51 MLDEKSSNTTSVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEY EVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR >gi|296918695|gb|GG773005.1| GENE 4 2923 - 4224 1388 433 aa, chain - ## HITS:1 COG:ECs5119 KEGG:ns NR:ns ## COG: ECs5119 COG2704 # Protein_GI_number: 15834373 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 433 1 433 433 705 100.0 0 MLVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGNIPFDVISIIMAVIAAI SAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFAGTGNISLATLPVIAEVAK EQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGHGISYLHLLSVVIPSTLLAVL VMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIEIKSGAKTSVWLFLLGVVGVVIY AIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVICKVDTDNILNSSTFKAGMSACICI LGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLAVIFFFASALLYSQAATAKALMPMALA LNVSPLTAVASFAAVSGLFILPTYPTLVAAVQMDDTGTTRIGKFVFNHPFFIPGTLGVAL AVCFGFVLGSFML >gi|296918695|gb|GG773005.1| GENE 5 4342 - 5778 1500 478 aa, chain - ## HITS:1 COG:ECs5120 KEGG:ns NR:ns ## COG: ECs5120 COG1027 # Protein_GI_number: 15834374 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Escherichia coli O157:H7 # 1 478 16 493 493 932 100.0 0 MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAM ANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLE LMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSLIKLVDAINQLREGFERKAVE FQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGLN TPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRL LSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQ LNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIG HHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNLMHPAYKAKRYTDESEQ >gi|296918695|gb|GG773005.1| GENE 6 6115 - 6591 332 158 aa, chain + ## HITS:1 COG:STM4327 KEGG:ns NR:ns ## COG: STM4327 COG3030 # Protein_GI_number: 16767576 # Func_class: R General function prediction only # Function: Protein affecting phage T7 exclusion by the F plasmid # Organism: Salmonella typhimurium LT2 # 1 158 14 171 171 242 90.0 2e-64 MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQ KMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSR MPGGGFSAGTGSGNTFDGEYQRKDDDRDRLDHKDDRQD >gi|296918695|gb|GG773005.1| GENE 7 6607 - 7863 1017 418 aa, chain - ## HITS:1 COG:ECs5122 KEGG:ns NR:ns ## COG: ECs5122 COG0531 # Protein_GI_number: 15834376 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 418 1 418 418 694 99.0 0 MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFA ILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSE QLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGN IELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVL HFDAYGEQMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQH NPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCML AGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLFLPKRKTPGNGITT >gi|296918695|gb|GG773005.1| GENE 8 8139 - 8432 472 97 aa, chain + ## HITS:1 COG:ECs5123 KEGG:ns NR:ns ## COG: ECs5123 COG0234 # Protein_GI_number: 15834377 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 158 100.0 2e-39 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVK VGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA >gi|296918695|gb|GG773005.1| GENE 9 8476 - 10122 2383 548 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 548 1 547 547 922 87 0.0 MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG MGGMGGMM >gi|296918695|gb|GG773005.1| GENE 10 10260 - 10613 337 117 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_4377 NR:ns ## KEGG: ECIAI1_4377 # Name: yjeI # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 117 1 117 117 198 100.0 7e-50 MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQ HGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN >gi|296918695|gb|GG773005.1| GENE 11 10663 - 11532 794 289 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4731 NR:ns ## KEGG: ECS88_4731 # Name: yjeJ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 289 1 289 289 553 100.0 1e-156 MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSAMELRDLLIALESRLHQKHKL DAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNTLELTDDQGENLTFVLTLH DGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSLLDFLPLYDVDCQENGNLEYD TYSQPEWKHNLFNHYLAVLYRFKDESGNEQFSGAVVKTREATPGKEVEAITRRMLDFSPR LKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHLRVQSTSKTAPQAK >gi|296918695|gb|GG773005.1| GENE 12 11767 - 12795 878 342 aa, chain - ## HITS:1 COG:ECs5127 KEGG:ns NR:ns ## COG: ECs5127 COG1509 # Protein_GI_number: 15834381 # Func_class: E Amino acid transport and metabolism # Function: Lysine 2,3-aminomutase # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 676 98.0 0 MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFI DRMEKGNPNDPLLRQVLTSQDEFVVAPGFSTDPLEEQHSVVPGLLHKYHNRALLLVKGGC AVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLT QLEAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAM AKLRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSD DEARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLDLQLRQQ >gi|296918695|gb|GG773005.1| GENE 13 12837 - 13403 669 188 aa, chain + ## HITS:1 COG:ECs5128 KEGG:ns NR:ns ## COG: ECs5128 COG0231 # Protein_GI_number: 15834382 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 377 100.0 1e-105 MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTD SAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNG QPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRS GEYVSRVK >gi|296918695|gb|GG773005.1| GENE 14 13691 - 13837 111 48 aa, chain + ## HITS:1 COG:STM4336 KEGG:ns NR:ns ## COG: STM4336 COG5510 # Protein_GI_number: 16767585 # Func_class: S Function unknown # Function: Predicted small secreted protein # Organism: Salmonella typhimurium LT2 # 1 48 1 48 48 62 95.0 2e-10 MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ >gi|296918695|gb|GG773005.1| GENE 15 14013 - 14330 423 105 aa, chain + ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 105 51 155 155 159 99.0 8e-40 MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSLALLAWAMKSLPVGTAYA VWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKLSTH >gi|296918695|gb|GG773005.1| GENE 16 14327 - 14860 690 177 aa, chain - ## HITS:1 COG:ECs5130 KEGG:ns NR:ns ## COG: ECs5130 COG3040 # Protein_GI_number: 15834384 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Escherichia coli O157:H7 # 1 177 1 177 177 365 99.0 1e-101 MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWYEIARFDHRFERGLEKV TATYSLRDDGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRAALKVSFFGPFYGGYNVIA LDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSKFIWVQQPGS >gi|296918695|gb|GG773005.1| GENE 17 14949 - 16082 884 377 aa, chain - ## HITS:1 COG:ampC KEGG:ns NR:ns ## COG: ampC COG1680 # Protein_GI_number: 16131975 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli K12 # 1 377 1 377 377 723 97.0 0 MFKTTLCTLLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYFTWG YADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGI TLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAVK PSGLSFEQAMKTRVFQPLKLNHTWINVPSAEEKNYAWGYREGKAVHVSPGALDAEAYGVK STIEDMARWVQSNLKPFDINEKILQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDIII NGSDNKIALAARPVKPITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNY PNPARVTAAWQILNTLQ >gi|296918695|gb|GG773005.1| GENE 18 16145 - 16504 455 119 aa, chain - ## HITS:1 COG:ECs5132 KEGG:ns NR:ns ## COG: ECs5132 COG3080 # Protein_GI_number: 15834386 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit D # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 208 100.0 2e-54 MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQ SFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI >gi|296918695|gb|GG773005.1| GENE 19 16515 - 16910 476 131 aa, chain - ## HITS:1 COG:ECs5133 KEGG:ns NR:ns ## COG: ECs5133 COG3029 # Protein_GI_number: 15834387 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit C # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 225 100.0 2e-59 MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGF VDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVA TIVILFVALYW >gi|296918695|gb|GG773005.1| GENE 20 16921 - 17655 854 244 aa, chain - ## HITS:1 COG:ECs5134 KEGG:ns NR:ns ## COG: ECs5134 COG0479 # Protein_GI_number: 15834388 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 514 99.0 1e-146 MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRM AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY IIGNARTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY NEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIAT LKPR >gi|296918695|gb|GG773005.1| GENE 21 17648 - 19456 1945 602 aa, chain - ## HITS:1 COG:frdA KEGG:ns NR:ns ## COG: frdA COG1053 # Protein_GI_number: 16131979 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Escherichia coli K12 # 1 602 1 602 602 1170 99.0 0 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDH DSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGM KIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGT LVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGS GILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR KGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMG GIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGN GNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGMAMEEGCGIYRTPELMQKTIDKL AELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGC TERDDVNFLKHTLAFRDADGTTRLEYSDVKITTLPPAKRVYGGEADAADKAEAANKKEKA NG >gi|296918695|gb|GG773005.1| GENE 22 19781 - 20758 872 325 aa, chain + ## HITS:1 COG:ECs5136 KEGG:ns NR:ns ## COG: ECs5136 COG2269 # Protein_GI_number: 15834390 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Truncated, possibly inactive, lysyl-tRNA synthetase (class II) # Organism: Escherichia coli O157:H7 # 1 325 11 335 335 662 100.0 0 MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRF VGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRP HYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKLDLSN VADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVYY KGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALG VDRLVMLALGAETLAEVIAFSVDRA >gi|296918695|gb|GG773005.1| GENE 23 21022 - 22479 1358 485 aa, chain + ## HITS:1 COG:ECs5137 KEGG:ns NR:ns ## COG: ECs5137 COG0531 # Protein_GI_number: 15834391 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 485 30 514 514 852 99.0 0 MIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKEEGGIYSWM NNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWHIAGLEPTQVVG LLAVAWMILVTVVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINF LASPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGY SLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASLSLGVWFARI TGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVF ILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTHMSAM IATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRMANKP ELALD >gi|296918695|gb|GG773005.1| GENE 24 22542 - 22856 206 104 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4745 NR:ns ## KEGG: ECS88_4745 # Name: yjeN # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 104 1 104 104 210 100.0 2e-53 MDDASRDPVITEDEIRELQFSAGDVAEIEQTVLSFVDTRHTRKVAMVVGNTINTLKERDG PRWGNLPDIYCAYLIRCLVFRGELVGYGDLFRMRYSEIKRPIIS >gi|296918695|gb|GG773005.1| GENE 25 22853 - 23167 239 104 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4746 NR:ns ## KEGG: ECS88_4746 # Name: yjeO # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 104 1 104 104 169 100.0 3e-41 MSARMFILCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEDDDTRDVGVIMT LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL >gi|296918695|gb|GG773005.1| GENE 26 23198 - 26521 3512 1107 aa, chain - ## HITS:1 COG:ECs5138 KEGG:ns NR:ns ## COG: ECs5138 COG3264 # Protein_GI_number: 15834392 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 1107 1 1107 1107 2050 99.0 0 MRLIITFLMAWCLSWGAYAATAPDSKQITQELEQAKAAKPAQPEVVEALQSALNALEERK GSLERIKQYQEVIDNYPKLSATLRAQLNNMRDEPRSVSPGMSNDALNQEILQISSQLLDK SRQAQQEQERAREIADSLNQLPQQQTDARRQLNEIERRLGTLTGNTPLNQAQNFALQSDS ARLKALVDELELAQLSANNRQELARLRSELAEKESQQLDAYLQALRNQLNSQRQQEAERA LESTEQLAESSADLPKDIVAQFKINRELSAALNQQAQRMDLVASQQRQAASQTLQVRQAL NTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDLLNKQPLL RQIHQADGQPLTAEQNRILEAQLRTQRELLNSLLQGGDTLLLELTKLKVSNGQLEDALKE VNEATHRYLFWTSDVRPMTIAWPLEIAQDLRRLISLDTFSQLGKASVMMLTSKETILPLF GALILVGCSIYSRRYFTRFLERSAAKVGKVTQDHFWLTLRTLFWSILVASPLPVLWMTLG YGLREAWPYPLAVAIGDGVTATVPLLWVVMICATFARPNGLFIAHFGWPRERVSRGMRYY LMSIGLIVPLIMALMMFDNLDDREFSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKE GSGDNITNHMLWNMMIGAPLVAILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRR WMLIQRRRLAFDRAKHRRAEMLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLR LVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILV FIITTQLVRNLPALLELAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKL QWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTIS DWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLV IDNPAPEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQ MRLESLNGKQTGRTLTSAGKGRQAGSL >gi|296918695|gb|GG773005.1| GENE 27 26543 - 27511 988 322 aa, chain - ## HITS:1 COG:ECs5139 KEGG:ns NR:ns ## COG: ECs5139 COG0688 # Protein_GI_number: 15834393 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Escherichia coli O157:H7 # 1 322 1 322 322 661 99.0 0 MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTASY RTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAG NYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFA RNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDDSVA LLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSVTKIGQPLAVSTETFVTPDAEPAPL PAEEIEAEHDASPLVDDKKDQV >gi|296918695|gb|GG773005.1| GENE 28 27608 - 28660 974 350 aa, chain - ## HITS:1 COG:ECs5140 KEGG:ns NR:ns ## COG: ECs5140 COG1162 # Protein_GI_number: 15834394 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Escherichia coli O157:H7 # 14 350 1 337 337 690 99.0 0 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMEFVNEQMDIY RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVS DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD >gi|296918695|gb|GG773005.1| GENE 29 28755 - 29300 756 181 aa, chain + ## HITS:1 COG:orn KEGG:ns NR:ns ## COG: orn COG1949 # Protein_GI_number: 16131987 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Escherichia coli K12 # 1 181 24 204 204 367 100.0 1e-102 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK L >gi|296918695|gb|GG773005.1| GENE 30 29967 - 31106 870 379 aa, chain - ## HITS:1 COG:yjeS KEGG:ns NR:ns ## COG: yjeS COG1600 # Protein_GI_number: 16131988 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli K12 # 1 379 1 379 379 779 98.0 0 MSEPLDLNQLAQNIKQWGLELGFQQVGITDTDLSASEPKLQAWLDKQYHGEMDWMARHGM LRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVSRYALGRDYHKLLRNRLKK LGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLVD IPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEELRPLMG NRIYGCDDCQLICPWNRYSQLTTEDDFSPRKPLHAPELIELFAWSEEQFLKVTEGSAIRR IGHLRWLRNIAVALGNAPWDETILTALESRKGEHPLLDEHIAWAIAQQIERRNACIVEVQ LPKKQRLVRVIEKGLPRDA >gi|296918695|gb|GG773005.1| GENE 31 31120 - 32601 1008 494 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 [Vibrio cholerae MZO-2] # 8 479 3 475 490 392 43 1e-108 MKKNPVSIPHTVWYADDIRRGEREAADALGLTLYELMLRAGEAAFQVCRSAYPDARHWLV LCGHGNNGGDGYVVARLAKAIGIDVTLLAQESDKPLPEEAALAREAWLNAGGEIHASNIV WPESVDLIVDALLGTGLQQAPRESISQLIDHANTHPAPIVAVDIPSGLLAETGATPGAVI NADHTITFIALKPGLLTGKARDVTGQLHFDSLGLDSWLAGQETKIQRFSAEQLSQWLIPR RPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLVRVLTRSENIAPLLTARPELM VHELTMDSLTESLEWADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPD KRHNRVITPHPGEAARLLGCSVAEIESDRLHCTQRLVQRYGGVAVLKGAGTVVAAHPDAL GIIDAGNAGMASGGMGDVLSGIIGALLGQKMSPYDAACAGCVAHGAAADVLAGGGGGGGG GGAGDTAFQAGIRS >gi|296918695|gb|GG773005.1| GENE 32 32734 - 33195 509 153 aa, chain + ## HITS:1 COG:ECs5144 KEGG:ns NR:ns ## COG: ECs5144 COG0802 # Protein_GI_number: 15834398 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 311 99.0 4e-85 MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTFSRGFLQALGHQGNVKS PTYTLVEPYMLDNLMVYHFDLYRLADPEELEFMGIRDYFANDAICLVEWPQQGTGVLPDP DVEIHIDYQAQGREARVSAVSSAGELLLARLAG >gi|296918695|gb|GG773005.1| GENE 33 33214 - 34551 999 445 aa, chain + ## HITS:1 COG:ECs5145 KEGG:ns NR:ns ## COG: ECs5145 COG0860 # Protein_GI_number: 15834399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 445 1 445 445 810 98.0 0 MMYRIRNWLVATLLLLCAQVGAATLSDIQVSNGNQQARITLSFIGDPDYAFSHQSKRTVA LDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDLTENGKTEAVKRQNGSNYT VVFTINADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNPFKTESNRTTGVISSNTVTRP AARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNNDPMFKGVL TRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMASWLE QHEKQSELLGGAGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEIHK RRPEHASLGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNYFLAHP MQSAPQGATAQTASTVTTPDRTLPN >gi|296918695|gb|GG773005.1| GENE 34 34561 - 36408 1765 615 aa, chain + ## HITS:1 COG:ECs5146 KEGG:ns NR:ns ## COG: ECs5146 COG0323 # Protein_GI_number: 15834400 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Escherichia coli O157:H7 # 1 615 1 615 615 1152 98.0 0 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL ARFDVTISLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR NHFAEPAVREPVAPRYSPAPASGSRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQLTPGEVPVC AQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQSDAQHVTIRAVPLPLRQQNLQILIP ELIGYLAKQSVFEPGNIAQWIARNLMSEHAQWSMAQAITLLADVERLCPQLVKTPPGGLL QSVDLHPAIKALKDE >gi|296918695|gb|GG773005.1| GENE 35 36446 - 37351 468 301 aa, chain + ## HITS:1 COG:miaA KEGG:ns NR:ns ## COG: miaA COG0324 # Protein_GI_number: 16131993 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Escherichia coli K12 # 1 301 16 316 316 579 99.0 1e-165 MGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLNIRDP SQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQ QAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPY QVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMW SYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIA G >gi|296918695|gb|GG773005.1| GENE 36 37437 - 37745 306 102 aa, chain + ## HITS:1 COG:ECs5148 KEGG:ns NR:ns ## COG: ECs5148 COG1923 # Protein_GI_number: 15834402 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Escherichia coli O157:H7 # 1 102 1 102 102 177 100.0 5e-45 MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS TVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE >gi|296918695|gb|GG773005.1| GENE 37 37821 - 39101 737 426 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 50 398 55 407 425 288 46 1e-76 MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGE GKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLER VEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRID VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNT VLEEIDAHEIPTLLVMNKIDMLDDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTER LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPA LIDYLI >gi|296918695|gb|GG773005.1| GENE 38 39187 - 40446 1455 419 aa, chain + ## HITS:1 COG:ECs5150 KEGG:ns NR:ns ## COG: ECs5150 COG0330 # Protein_GI_number: 15834404 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 419 1 419 419 669 99.0 0 MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKG TGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEP GLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVEMNVQYRVTDPEKYLYSVTSP DDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQA ARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILE AQGEVARFAKLLPEYKAAPEITRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLK SGNAPAAKSDNGASNLLRLPPASSSTTSGASNTSSTSQGDIMDQRRANAQRNDYQRQGE >gi|296918695|gb|GG773005.1| GENE 39 40449 - 41453 1306 334 aa, chain + ## HITS:1 COG:ECs5151 KEGG:ns NR:ns ## COG: ECs5151 COG0330 # Protein_GI_number: 15834405 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 566 100.0 1e-161 MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIE TVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLK RKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAE RVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHRS QGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRSL RAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR >gi|296918695|gb|GG773005.1| GENE 40 41535 - 41732 236 65 aa, chain + ## HITS:1 COG:ECs5152 KEGG:ns NR:ns ## COG: ECs5152 COG3242 # Protein_GI_number: 15834406 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 65 1 65 65 80 100.0 6e-16 MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRRFGGGLVVAGVVVYYML RKTIG >gi|296918695|gb|GG773005.1| GENE 41 41836 - 43134 1508 432 aa, chain + ## HITS:1 COG:ECs5153 KEGG:ns NR:ns ## COG: ECs5153 COG0104 # Protein_GI_number: 15834407 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 867 100.0 0 MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGI LRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREK ARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAE AVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVT SSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA TTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTP LAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDR TETMILRDPFDA >gi|296918695|gb|GG773005.1| GENE 42 43411 - 43764 234 117 aa, chain + ## HITS:1 COG:ECs5154 KEGG:ns NR:ns ## COG: ECs5154 COG1959 # Protein_GI_number: 15834408 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 117 25 141 141 231 100.0 3e-61 MTSISEVTDVYGVSRNHMVKIINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELE PLSLVNCSSEFCHITPACRLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE >gi|296918695|gb|GG773005.1| GENE 43 43803 - 46244 1250 813 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 21 728 4 705 730 486 37 1e-136 MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVELHIEGEEQLEGLRRRLR AMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIH GDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEAGVGFVVPDDSRLSFDILIPP DQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYIWPQA VEQQVAGLKEEVPEEAKVGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA DVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMVCEMTVS SKGRLTGYKFYEAVMSSHARLTYTKVWHILQGDQDLREQYAPLVKHLEELHNLYKVLDKA REERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEP ALFRIHDKPSTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESVADRPDAEMLQTMLL RSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETG GYHYSMEEMLQLGQHCSMAERRADEATRDVSDWLKCDFMLDQVGNVFKGVISSVTGFGFF VRLDDLFIDGLVHVSSLDNDYYRFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKI DFSLISSERAPRNVGKTAREKAKKGDAGKKGGKRRQVGKKVNFEPDSAFRGEKKPKPKAA KKDARKAKKPSVKTQKIAAATKAKRAAKKKVAE >gi|296918695|gb|GG773005.1| GENE 44 46336 - 47067 455 243 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 3 242 7 246 255 179 40 5e-44 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR QRS >gi|296918695|gb|GG773005.1| GENE 45 47194 - 47595 386 133 aa, chain + ## HITS:1 COG:ECs5157 KEGG:ns NR:ns ## COG: ECs5157 COG3789 # Protein_GI_number: 15834411 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 227 98.0 4e-60 MTWNPLALATALQTVPEQNIDVTNSESALIIKMNDYGDLQINILFTSRQMIIETFICPVS SISNPDEFNTFLLRNQKLMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEITSLVDN ALDLAEITEEYSH >gi|296918695|gb|GG773005.1| GENE 46 47614 - 48312 954 232 aa, chain + ## HITS:1 COG:yjfJ KEGG:ns NR:ns ## COG: yjfJ COG1842 # Protein_GI_number: 16132004 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Escherichia coli K12 # 1 232 1 232 232 291 100.0 7e-79 MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSH DKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDG VEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQ AERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE >gi|296918695|gb|GG773005.1| GENE 47 48362 - 49021 735 219 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4769 NR:ns ## KEGG: ECS88_4769 # Name: yjfK # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 219 1 219 219 426 100.0 1e-118 MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDALLIELPGEEYTVAAVSC IDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAK AMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFSMGYQRQVTEDT YEYLLLNGEESFNDLGEPEWLFSRALGVDIPITSLHIIG >gi|296918695|gb|GG773005.1| GENE 48 49039 - 49437 415 132 aa, chain + ## HITS:1 COG:ECs5160 KEGG:ns NR:ns ## COG: ECs5160 COG3766 # Protein_GI_number: 15834414 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 132 1 132 132 218 99.0 2e-57 MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNNTAAALAFSGTLLGYVI PLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSEKIINHNTAAGMFMGTAAL AGGIFNAACMTW >gi|296918695|gb|GG773005.1| GENE 49 49447 - 50085 345 212 aa, chain + ## HITS:1 COG:ECs5161 KEGG:ns NR:ns ## COG: ECs5161 COG5463 # Protein_GI_number: 15834415 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli O157:H7 # 1 212 1 212 212 379 96.0 1e-105 MARKRKSRNNKNIGHGAISRIGRPHNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCGDSG DVDNDGDGTFYATAQDCIDDGNNSDICAHGWNNAKAAFYADVPKNMTQHNCQSKYENCYY DNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRNTSGDYSWRSGSGKKE SYSSGGFTTKKASTVSRGGYGRSSSARGHWGG >gi|296918695|gb|GG773005.1| GENE 50 50088 - 51251 984 387 aa, chain + ## HITS:1 COG:yjfC KEGG:ns NR:ns ## COG: yjfC COG0754 # Protein_GI_number: 16132008 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Escherichia coli K12 # 1 387 1 387 387 796 98.0 0 MLRHNVPVRRDLDRIAADNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMC LEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNAD TPTSLYESAYFQWLWLEDARRSGVIPRDADQYNAIQERLISRFSELYSREPFYFCCCQDT DEDRSTVLYLQDCAEQAGQESRFIYIEELGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRD DNGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFDGEKPQIAAGESYV RKPIYSREGGNVTIFDGQNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDE ACGMGIREDNTLITKDTSRFVPHYIAG >gi|296918695|gb|GG773005.1| GENE 51 51335 - 52960 1155 541 aa, chain + ## HITS:1 COG:ECs5163 KEGG:ns NR:ns ## COG: ECs5163 COG1960 # Protein_GI_number: 15834417 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 1 541 6 546 546 1100 98.0 0 MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLELGR LANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEEDARSGAFVARAAR FMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQKRGLLI GMGMTEKQGGSDVMSNTTRAERLDDGSYRLVGHKWFFSVPQSDAHLVLAQTAGGLSCFFV PRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRF DCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLAR AWDRRADAKEALWARLFTPAAKFVICKRGIPFVAEAMEVLGGIGYCEESELPRLYREMPV NSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEE LGREITHQLFLLGCGAQMLKYAFPPMAQAWCKVMLDTRGGVRLSEQIQNDLLLRATGGVC L >gi|296918695|gb|GG773005.1| GENE 52 53077 - 53364 269 95 aa, chain - ## HITS:1 COG:no KEGG:SSON_4370 NR:ns ## KEGG: SSON_4370 # Name: yjfN # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 95 6 100 100 172 100.0 3e-42 MELTMKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERI VALKADEQGASWYRIITMYEDQQPDNWRVQAILYA >gi|296918695|gb|GG773005.1| GENE 53 53501 - 53830 211 109 aa, chain - ## HITS:1 COG:no KEGG:APECO1_2203 NR:ns ## KEGG: APECO1_2203 # Name: not_defined # Def: putative biofilm stress and motility protein A # Organism: E.coli_APEC # Pathway: not_defined # 1 109 34 142 142 201 100.0 6e-51 MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQEIRRDQTQGLQRIGSVS TMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYSQAILYRK >gi|296918695|gb|GG773005.1| GENE 54 54012 - 54761 559 249 aa, chain + ## HITS:1 COG:yjfP KEGG:ns NR:ns ## COG: yjfP COG1073 # Protein_GI_number: 16132012 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 249 1 249 249 494 97.0 1e-140 MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQAGLRVIMP DAPDHGSRFSGDAARRLNQFWQILLQSMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMT ALGITARHPTIKCIASMMGSGYFTSLARSLFQPLIPETAAQQNEFNNIVAPLAEWEATNH LEQLGDRPLLLWHGLDDDVVPADESLRLQQALSETGRDKLLTCSWQPGVRHRITPEALDA AVTFFRQHL >gi|296918695|gb|GG773005.1| GENE 55 54758 - 55513 854 251 aa, chain - ## HITS:1 COG:ECs5167 KEGG:ns NR:ns ## COG: ECs5167 COG1349 # Protein_GI_number: 15834421 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 482 100.0 1e-136 MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLDESGKLKKVRNGAEAIT QQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCGSTAFLLGREMCGKPVQII TNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSENSLYAGHWMFTSGKGLTAEGL YKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLFSRADQIDMLITGKNANPEILQQ LEAQGVSILRV >gi|296918695|gb|GG773005.1| GENE 56 55621 - 56685 1155 354 aa, chain - ## HITS:1 COG:ECs5168 KEGG:ns NR:ns ## COG: ECs5168 COG2220 # Protein_GI_number: 15834422 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Escherichia coli O157:H7 # 1 354 3 356 356 748 99.0 0 MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGANVCV DFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHN DHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHAL DAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGTLYHSGDSHYSNYYAKHGNEH QIDVALGSYGENPRGITDKMTSADILRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWE MKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL >gi|296918695|gb|GG773005.1| GENE 57 57040 - 58437 1741 465 aa, chain + ## HITS:1 COG:sgaT KEGG:ns NR:ns ## COG: sgaT COG3037 # Protein_GI_number: 16132015 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 465 20 484 484 804 99.0 0 MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSG ILTSTFKPVVAKMSEVYGINGAISDTYASMMATIERMGDAYSWVGYAVLLALALNICYVL LRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKP TQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVM TIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNG ISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPM FFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPM MQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQSA >gi|296918695|gb|GG773005.1| GENE 58 58453 - 58758 367 101 aa, chain + ## HITS:1 COG:ECs5170 KEGG:ns NR:ns ## COG: ECs5170 COG3414 # Protein_GI_number: 15834424 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Escherichia coli O157:H7 # 1 101 1 101 101 196 100.0 6e-51 MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHI AGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKEHFPQDVK >gi|296918695|gb|GG773005.1| GENE 59 58768 - 59232 645 154 aa, chain + ## HITS:1 COG:ECs5171 KEGG:ns NR:ns ## COG: ECs5171 COG1762 # Protein_GI_number: 15834425 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 287 96.0 5e-78 MKLRDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYYQAILDAVEQHGPYFVL APGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVDILITMAAVDANTHQEVGIMQ IVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA >gi|296918695|gb|GG773005.1| GENE 60 59246 - 59896 884 216 aa, chain + ## HITS:1 COG:sgaH KEGG:ns NR:ns ## COG: sgaH COG0269 # Protein_GI_number: 16132018 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Escherichia coli K12 # 1 216 1 216 216 421 100.0 1e-118 MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVL ADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWE QAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLF KGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG >gi|296918695|gb|GG773005.1| GENE 61 59906 - 60760 1001 284 aa, chain + ## HITS:1 COG:ECs5173 KEGG:ns NR:ns ## COG: ECs5173 COG3623 # Protein_GI_number: 15834427 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 581 99.0 1e-166 MLSKQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLDWSREQRLAL VNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYD VYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF QLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK QSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGMVEAA >gi|296918695|gb|GG773005.1| GENE 62 60760 - 61446 723 228 aa, chain + ## HITS:1 COG:ECs5174 KEGG:ns NR:ns ## COG: ECs5174 COG0235 # Protein_GI_number: 15834428 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 462 98.0 1e-130 MQKLKQQVFEANMELPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKADDMVVVDM SGNVVEGEYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYF FGDIPCTRGLSKEEVQGEYELNTGKVIIETLGDAEPLHTPGIVVYQHGPFAWGKDAHDAV HNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRKHGPNAYYGQK >gi|296918695|gb|GG773005.1| GENE 63 61575 - 61850 295 91 aa, chain - ## HITS:1 COG:no KEGG:ECO111_5015 NR:ns ## KEGG: ECO111_5015 # Name: yjfY # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 91 1 91 91 141 100.0 7e-33 MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYINHNFATESEARQALNEE TDAQGATYYHVILMREPGSNGNMHASADIYR >gi|296918695|gb|GG773005.1| GENE 64 62178 - 62573 680 131 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|221800783|ref|NP_418621.2| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12 substr. MG1655] # 1 131 1 131 135 266 100 4e-70 MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANET ADDAEAGDSEE >gi|296918695|gb|GG773005.1| GENE 65 62899 - 63126 385 75 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. Sakai] # 1 75 1 75 75 152 100 7e-36 MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK RARYLSLLPYTDRHQ >gi|296918695|gb|GG773005.1| GENE 66 63168 - 63617 720 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804792|ref|NP_290833.1| 50S ribosomal protein L9 [Escherichia coli O157:H7 EDL933] # 1 149 1 149 149 281 100 1e-74 MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAE VLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNG VLRTTGEHEVSFQVHSEVFAKVIVNVVAE >gi|296918695|gb|GG773005.1| GENE 67 64039 - 64530 262 163 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4790 NR:ns ## KEGG: ECS88_4790 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 163 1 163 163 247 100.0 1e-64 MGKKTAPLLPYTNQMLSEFGERLKLARLRRRLTAKQVAERAGMSPITLRSLESGSAGVTI GAYLSVMQVLGLETDLNKLAAEDDLGRQLQDSRLIKKRGLSRSSGKNEEGIQTDPFQTRY EKEGLLTTDLTALAEGSTPSITGETSTSLAALLKPIKKPLKGN >gi|296918695|gb|GG773005.1| GENE 68 64533 - 65801 633 422 aa, chain + ## HITS:1 COG:CC2770 KEGG:ns NR:ns ## COG: CC2770 COG3550 # Protein_GI_number: 16127002 # Func_class: R General function prediction only # Function: Uncharacterized protein related to capsule biosynthesis enzymes # Organism: Caulobacter vibrioides # 50 352 39 358 435 73 26.0 7e-13 MALIGVYADWEGLDGPERIGYLHSRRTRTREIFEFEYDKKALADPSLNFIQLDPEIMLYE GAQYPIPPKDKFGAFSDSCPDRWGRMLMKRRFERDIRDGLCDKDSHLYESDYLLGVHDLY RVGALRYKREDAGEFLDNRIDVAAPPFTEIASLERASRAIEEDPDNKELMGQKWLRMLIA PGGSLGGARPKASVVDEAGHLYIAKFPSVKDEYDVGGWEMVVNALAVGCGLNVAPAQAHK FASNYHCFMVRRFDRTNAGRRLHFASAMTLTRHQDGEDASTGVSYLELADVLIRHGAQTN TDLKELWSRIVFNILVSNTDDHLRNHGYILIPGKGWRLSEAYDLNPVARSDGLKLNITEN DNALDLELAREVAEYFRLGLTEADDIIANFRGIVSQWRIIAERLRLPGREQELMAEAFRG AI >gi|296918695|gb|GG773005.1| GENE 69 65944 - 67221 1049 425 aa, chain - ## HITS:1 COG:STM3134 KEGG:ns NR:ns ## COG: STM3134 COG0477 # Protein_GI_number: 16766434 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 3 412 2 416 434 457 54.0 1e-128 MNKIKNYRWHMIALVCFITVINYLDRTALGIAAPTIMETTGITKEQYSWIVSAFQLAYTL GQPIMGFFIDTVGLKLSFAICAAIWGLATMGHALTGTWSGLAFMRALMGFSEASAIPAGV KTASTWFPAKERGVATGVFNMGTSLGAMLAPPLIAWCIMFHSWQFAFIVSGSLALLAALF WFFCYKDPKDAKRLSDEERHYIESGQEQHLKTDKKEKTSIKHILSQRNFWGIGIARFLAD PAWGTINFWVPIFFVETLHFSLKEIAMFVWLPFLLGDLGCLASGFVAKFFHDRGVSLINS RRITFTIAAVIMMTIGLVSIVENPYIAVLLISIGAFSHQCLSTVAATLGGDLFKKDEVAT AVGMAGACAWSGQLIFNLFIGAFVHIIGFAPFFIALAFFDIIGAIALWMLIKVKDEEPQV QLATS >gi|296918695|gb|GG773005.1| GENE 70 67314 - 69386 1320 690 aa, chain - ## HITS:1 COG:TM0427 KEGG:ns NR:ns ## COG: TM0427 COG1053 # Protein_GI_number: 15643193 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Thermotoga maritima # 29 688 5 663 664 353 35.0 5e-97 MSQLDEAILDALTHVTFPKGFAQAEPAWVVTVDGVDYPLWKTDALVVGSGAAGLRAAVEL KRRQQNVLIATAGLYMGTSACSGSDKQTLFTAATAGNGDNFAKLAEALASGGAMDHDTAY VEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGRATSCGPRTSRLMVKVLLEEV QRLAIPMLTSATVIKLLHQRDENGEDRVAGAIIATGHRAHNPWGLAIVTAPNVVLATGGP GELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIY SVDAGGNEYNFLADYYRTTQELASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGR LVFMDFNRNPEPVPGDLPFSLDRLDDDVRAYLENNDALAPSPIERLQQMNPLSISLYKMH GYDLITQPLQFAMNNQHMNGGIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQV FAVRLARFIGCTQKRNIDGDIAQLAAPALASIREIITQAHDNGSGMPLSVVREKIQARMS DYAGFICHADKVRRATRDALLLNEFVQRHGLAIKHVGEVAELFMWRHMALTSAAVLTQLT HYIDAGGGSRGARMVIDPQGKCLPQTRRGVKEEWRFRSELAEDKNHKLTIQYSQGSFITE VKSLRMQPCINGIYFEKNWPDFLKGDIYTQ >gi|296918695|gb|GG773005.1| GENE 71 69383 - 70924 1759 513 aa, chain - ## HITS:1 COG:BH3898 KEGG:ns NR:ns ## COG: BH3898 COG4670 # Protein_GI_number: 15616460 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Bacillus halodurans # 3 507 4 507 525 421 46.0 1e-117 MRKLSTAETLAAQIQDGATIAISGNGGGMVEADHIMAAIEERFLQTGHPRDLTLIHSLGI GDRDSKGTNRFAHAEMLKRIIAGHFTWSPKMQELVKSNAIEAYCFPGGVIQALLREIGAG RPGLFTHVGLGSFVDPRNGGGKSNECTTEDLVELIEIDGETKLRYRPFKVDYAILRGTYA DPRGNVSLEEEAIDMDSYSMALAAHNSGGKVFVQVRDVLEAGTIEPRKVKLPGILVDGIV EHREQPQTYLGGYDLTISGQHRRLSSNDAIELVSHPVRRLIARRAARELAAGASTNFGFG IPGGIPGVALREGVPYQSLWLSVEQGVHNGMMLDDALFGCARNADAIIPSLDQFEFYSGG GIDITFLGMGEMDQYGNVNVSHLNGNLIGPGGFLEIAQNARKVVFCGTFDAKGSKIDVTP DGLHIAQSGQIPKLVTQVEKITFSAAYAQQSGQEVLYITERAVFQLTAEGVELIEIAPGV EIERDILPFMAFRPIIKHPRLMESSLFTPMEDA >gi|296918695|gb|GG773005.1| GENE 72 70934 - 71710 762 258 aa, chain - ## HITS:1 COG:AF2273_2 KEGG:ns NR:ns ## COG: AF2273_2 COG1024 # Protein_GI_number: 11499854 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Archaeoglobus fulgidus # 16 255 17 259 262 157 33.0 2e-38 MSDQPVLFSRAAASCRLTLNREDKCHAINEEMIESLDHYLNEIENDTALRLVELTATGDK FFCAGGDIKSWSAYSPLDMGRKWIKRGNDVFNRLRNLPQLTVANLNGHTIGGGIELALCC DIRIARPGAKFSNPEVMLGMVPGWMGIERVLNQVGPVVGRQMLMLGKRLTAQEAQVANLI DEVVEKEQVESWMANQLAQLEKCGPVALAHIKQLILALENKHADYSHQLLAGLMSATQDC QQATHAFAEKAGVSFHNQ >gi|296918695|gb|GG773005.1| GENE 73 71713 - 72561 663 282 aa, chain - ## HITS:1 COG:SMc04130 KEGG:ns NR:ns ## COG: SMc04130 COG1082 # Protein_GI_number: 15963875 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Sinorhizobium meliloti # 11 225 6 218 274 227 52.0 2e-59 MRDLLQRPDLFSINTATLGYKTPLPAIIDACAARGIGAIAPWRRELQSEDLQQIARQLAA SNMNVSGLCRSTYYTAPTLAERKLAIDDNRRALDDAAVLNAACYMQVVGGLPMGTKDLYE AREQVKQGIRQLLPHSKEVGVPIALEPLHPMTAADRSCLCTLRQALDWCDELDPDGEFGL GVAVDVYHVWWDPDLASQILRAGKRILAFHVSDWLVPTTDLVNDRECREMVSSIFRQFVG WLKTPDLMALLNWKYSHRTGGRKILTARWILASIASHIIVKE >gi|296918695|gb|GG773005.1| GENE 74 72571 - 73362 935 263 aa, chain - ## HITS:1 COG:mlr3057 KEGG:ns NR:ns ## COG: mlr3057 COG1028 # Protein_GI_number: 13472685 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 4 263 2 253 253 204 43.0 1e-52 MKSTRPVAVITGAARGIGKGCALELARGGFNLLINDRPDADSVEKLHATQQECLAEGVEV ICFPADVGDLSLHEEMLDAAQNQWGRLDCLLNNAGISVKKRGDLLDLEPDSFDQNIAINT RAPFFLAQAFSKRLLAQPKPEAELPHRSIIFVSSINAIMLAMNRGEYTIAKTAVSAAARL FAARLCNEQIGVYEVRPGLIKTDMTIPATAYYDELIAKGLVPWGRWGYPADIASTVRAMA EGKLIYTCGQAVAIDGGLSMPRF >gi|296918695|gb|GG773005.1| GENE 75 73574 - 74221 507 215 aa, chain + ## HITS:1 COG:ytfA KEGG:ns NR:ns ## COG: ytfA COG1309 # Protein_GI_number: 16132027 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 108 215 1 108 108 206 97.0 2e-53 MYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHFGNKENLFIE VLEYTWNDIRQKEKALDFSDLPPQKAIEKIIDFTWDYYISNPWFLKIVHSENQSKGVHYA KSQRLLEINHAHLQLMESLLDEGKKQNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVY HISMVSPQALEARRKVIKETILSWLLVDPSSTARE >gi|296918695|gb|GG773005.1| GENE 76 74205 - 74843 515 212 aa, chain - ## HITS:1 COG:ytfB KEGG:ns NR:ns ## COG: ytfB COG3061 # Protein_GI_number: 16132028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell envelope opacity-associated protein A # Organism: Escherichia coli K12 # 1 212 13 224 224 362 99.0 1e-100 MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVT REAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTHTQPFQP DSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGADKPLSNLQNGQMVKIRQN ASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR >gi|296918695|gb|GG773005.1| GENE 77 75061 - 75681 976 206 aa, chain + ## HITS:1 COG:ECs5185 KEGG:ns NR:ns ## COG: ECs5185 COG0545 # Protein_GI_number: 15834439 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli O157:H7 # 1 206 54 259 259 395 100.0 1e-110 MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIADALEGKHPAVPVDVVHR ALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTESGLQFRVINQGEGAIPART DRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIEALTLMPVGSKWELTIPQELA YGERGAGASIPPFSTLVFEVELLEIL >gi|296918695|gb|GG773005.1| GENE 78 75990 - 77402 1523 470 aa, chain + ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 470 1 470 470 843 98.0 0 MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVY MIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVV AITAYAQFWFPGLSDWVASLSVIILLLVLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGL VMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKD PEKSLPRAINSIPIRIIMFYVFSLIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVIN FVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVV MLYVNPSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCW VCMAFFVFVLVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRAAELRK >gi|296918695|gb|GG773005.1| GENE 79 77447 - 78109 889 220 aa, chain - ## HITS:1 COG:ytfE KEGG:ns NR:ns ## COG: ytfE COG2846 # Protein_GI_number: 16132031 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Regulator of cell morphogenesis and NO signaling # Organism: Escherichia coli K12 # 1 220 1 220 220 421 99.0 1e-118 MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVDVIEAELAKLAE QPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLT MLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPP PEACTTWKAMYNGINELIDDLMEHISLENNVLFPRALAGE >gi|296918695|gb|GG773005.1| GENE 80 78217 - 79182 1008 321 aa, chain - ## HITS:1 COG:ECs5188 KEGG:ns NR:ns ## COG: ECs5188 COG0697 # Protein_GI_number: 15834442 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 321 4 324 324 556 98.0 1e-158 MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLIALPIAWLGRVRLRQLA RRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLPVVIPVFANLLYSQRDGKL AWGKLAPALVCIGIGLACVNIAELNHGLPDFDWARYTSGIVLALVSVVCWAWYALRNARW LRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNMQTPDFSLPFGPRPLVFISLMVAI AVLCSWIGALCWNVASQRLPTVILGPLIVFETLAGLLYTFLLRQQMPPLMTLSGIALLVI GVVIAVRAKPEKPLTESVSES >gi|296918695|gb|GG773005.1| GENE 81 79290 - 80150 891 286 aa, chain - ## HITS:1 COG:ECs5190 KEGG:ns NR:ns ## COG: ECs5190 COG0702 # Protein_GI_number: 15834443 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 466 96.0 1e-131 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQVLTAQGITVRQADYGDEAALT SALQGVEKLLLISSSEVGQRAPQHRNVINAAKAADVKFIAYTSLLHADSSPLGLADEHIE TEKMLADSGIVYTLLRNGWYTENYLASAPAALEHGVFIGAAGDGKIASATRADYAVAAAR VISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKPITYQNLSEADFAAALKSVGLPDGL ADMLADSDVGASKGGLFDDSKTLSKLIGRPTTTLAESVSHLFNVNN >gi|296918695|gb|GG773005.1| GENE 82 80149 - 80619 458 156 aa, chain + ## HITS:1 COG:ytfH KEGG:ns NR:ns ## COG: ytfH COG1733 # Protein_GI_number: 16132034 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 156 1 156 156 300 99.0 5e-82 MGSLHRFVLCLNTLTLKLTFSKYVQKGKYEMSQVSLSQQLKEGNLFAEQCPSREVLKHVT SRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEY SLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA >gi|296918695|gb|GG773005.1| GENE 83 80748 - 82691 2228 647 aa, chain - ## HITS:1 COG:cpdB KEGG:ns NR:ns ## COG: cpdB COG0737 # Protein_GI_number: 16132035 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Escherichia coli K12 # 1 647 1 647 647 1274 100.0 0 MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLIN DARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFN YGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVV PPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENS VYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDL QLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSA DNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPAS YVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLIN WDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVA TNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAG DKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK >gi|296918695|gb|GG773005.1| GENE 84 82881 - 83621 784 246 aa, chain + ## HITS:1 COG:cysQ KEGG:ns NR:ns ## COG: cysQ COG1218 # Protein_GI_number: 16132036 # Func_class: P Inorganic ion transport and metabolism # Function: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase # Organism: Escherichia coli K12 # 1 246 1 246 246 476 99.0 1e-134 MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDIP VLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVM NVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGS SLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPG FRVSIY >gi|296918695|gb|GG773005.1| GENE 85 83611 - 84168 687 185 aa, chain - ## HITS:1 COG:ECs5194 KEGG:ns NR:ns ## COG: ECs5194 COG3054 # Protein_GI_number: 15834448 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 183 1 183 184 351 98.0 4e-97 MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGK VRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESN KKLYPWSQFIVDSNGVARGAWQLDEKSSAVVVLDKDGRVQWAKDGALTQEEVQQVMDLLH KLINK >gi|296918695|gb|GG773005.1| GENE 86 84493 - 84699 256 68 aa, chain + ## HITS:1 COG:no KEGG:G2583_5047 NR:ns ## KEGG: G2583_5047 # Name: ytfK # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 68 14 81 81 119 100.0 5e-26 MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQV MRLQTEMA >gi|296918695|gb|GG773005.1| GENE 87 84777 - 86120 1506 447 aa, chain - ## HITS:1 COG:ECs5196 KEGG:ns NR:ns ## COG: ECs5196 COG1253 # Protein_GI_number: 15834450 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 876 100.0 0 MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTV VQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLT PKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDI YAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAE HPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALE SFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTP IDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQL LVTRIDSKATALSPKLPDAKDKEESVA >gi|296918695|gb|GG773005.1| GENE 88 86443 - 87081 723 212 aa, chain - ## HITS:1 COG:msrA KEGG:ns NR:ns ## COG: msrA COG0225 # Protein_GI_number: 16132041 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Escherichia coli K12 # 1 212 1 212 212 404 99.0 1e-113 MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNVPDGMEIAIFAMGCFWGVERLF WQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHD PAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRRITTEIANATPF YYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA >gi|296918695|gb|GG773005.1| GENE 89 87287 - 89020 1557 577 aa, chain + ## HITS:1 COG:ECs5198 KEGG:ns NR:ns ## COG: ECs5198 COG0729 # Protein_GI_number: 15834452 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 1 577 1 577 577 1168 99.0 0 MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLSTIESDEVTPDRRFRAR VDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGVPVLIGGTDVVLRGGARTD KDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFDSEFTKAQLGIALGLHKAFWD IDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEYESKDLAELNRRLSATGWFNSVV VAPQFDKARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSLTT STSISAPEQILDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLVASRYWDLSSG WQRAINLRWSFDHFTQGEITNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSIDYSNTAW GSDVDFSVFQAQNVWIRTLYDRHRFVTRGTLGWIETGDFDKVPPDLRFFAGGDRSIRGYK YKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGV GVRWESPVGPIKLDFAVPVADKDEHGLQFYIGLGPEL >gi|296918695|gb|GG773005.1| GENE 90 89017 - 92796 4009 1259 aa, chain + ## HITS:1 COG:ytfN KEGG:ns NR:ns ## COG: ytfN COG2911 # Protein_GI_number: 16132043 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 1259 1 1259 1259 2427 99.0 0 MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVPGLDIGKVTGGWRDLTL SDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQVNIDSKKMPPSEQVEEEE DSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSGLNWQEKTLTLKPTSLKGLLI ALPKVAEAAQEEVVEPKIENPQPEEKPLGETLKDLFSRPVLPEMTDVHLPLNLNIEEFKG EQLRVTGDTDITVSTMLLKVSSIDGNTKLDALDIDSSQGIVNASGTAQLSDNWPVDITLN STLNVEPLKGEKVKLKVGGALREQLEIGVNLSGPVDMDLRAQTRLAEAGLPLNVEVNSKQ LYWPFTGEKQYQADDLKLKLTGKMTDYTLSMRTAVKGQEIPPATITLDAKGNEQQVNLDK LTVAALEGKTELKALLDWQQAISWRGELTLNGINTAKEIPEWPSKLNGLIKTRGSLYGGT WQMEVPELKLTGNVKQNKVNVDGTLKGNSYMQWMIPGLHLELGPNSAEVKGELGVKDLNL DATINAPGLDNALPGLGGTAKGLVKVRGTVEAPQLLADITARGLRWQELSVAQVRVEGDI KSTDQIAGKLDVRVEQISQPDVNINLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFD RKEERWKGTLSNTRFQTPVGPWSLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTID AGAEGRVVVNLNRFDLAMLKPFMPETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNV QVTQTVNDAALPVAFQTLNLTAELRNNRAELGWTIRLTNNGQFDGQVQVTDPQGRRNLGG NVNIRNFNLAMINPIFTRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFD MQPSQLAVNFNGMRSTLAGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPM VRMDVSPDVVFEATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPK TASIPINSNLTVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQ DLIVREGELLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQ QAALSYLLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTEGVGD SSQVVVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF >gi|296918695|gb|GG773005.1| GENE 91 92799 - 93140 214 113 aa, chain + ## HITS:1 COG:ECs5200 KEGG:ns NR:ns ## COG: ECs5200 COG2105 # Protein_GI_number: 15834454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 113 1 113 113 226 100.0 1e-59 MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGAVPGNGTVHGEVYRIDN ATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVDGLKLIESGDWLDRDK >gi|296918695|gb|GG773005.1| GENE 92 93558 - 94088 764 176 aa, chain - ## HITS:1 COG:ECs5204 KEGG:ns NR:ns ## COG: ECs5204 COG0221 # Protein_GI_number: 15834458 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 346 98.0 1e-95 MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYIN HTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLIAVPHTKLSKEYDH IKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFERAKNK >gi|296918695|gb|GG773005.1| GENE 93 94398 - 95354 1213 318 aa, chain + ## HITS:1 COG:ECs5205 KEGG:ns NR:ns ## COG: ECs5205 COG1879 # Protein_GI_number: 15834459 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 569 99.0 1e-162 MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIAD GQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKS LYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKAFAEAIKNAPN IKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGK DILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTL YLPDTAKEELEKKKNMGY >gi|296918695|gb|GG773005.1| GENE 94 95494 - 96996 204 500 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 268 477 9 214 245 83 26 7e-15 MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYH VDRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRK EMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQE VELLFGLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETRELPQIELVKM MLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRT ETAEVIFGIKPADSGTALIKGKLQTLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENII LALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTR PQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQ VAEIPLAELSVPAIMNAIAA >gi|296918695|gb|GG773005.1| GENE 95 97010 - 98032 1179 340 aa, chain + ## HITS:1 COG:ECs5207 KEGG:ns NR:ns ## COG: ECs5207 COG1172 # Protein_GI_number: 15834461 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 340 2 341 341 493 99.0 1e-139 MPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILN RAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILA GLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVTFNSPDLSWFGSGSLLFLPTP VIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILL SGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRNRDKT >gi|296918695|gb|GG773005.1| GENE 96 98043 - 99014 1019 323 aa, chain + ## HITS:1 COG:ECs5208 KEGG:ns NR:ns ## COG: ECs5208 COG1172 # Protein_GI_number: 15834462 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 513 99.0 1e-145 MITIGVFVLGYIYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSV IAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLR GVSYLVSEESIPINHPVYDTLSSLAWKIPGGGRLSAMGLLMLAVVVIGILLAHRTRFGNQ VYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGVELDAI ASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQ RGLTVLWENRQSSPVTRVNIAQR >gi|296918695|gb|GG773005.1| GENE 97 99074 - 100072 1135 332 aa, chain - ## HITS:1 COG:fbp KEGG:ns NR:ns ## COG: fbp COG0158 # Protein_GI_number: 16132054 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Escherichia coli K12 # 1 332 1 332 332 685 100.0 0 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGE VQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDV NVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTY DPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYI GSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDI IPETLHQRRSFFVGNDHMVEDVERFIREFPDA >gi|296918695|gb|GG773005.1| GENE 98 100248 - 101621 1721 457 aa, chain + ## HITS:1 COG:ZyjfG KEGG:ns NR:ns ## COG: ZyjfG COG0773 # Protein_GI_number: 15804823 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Escherichia coli O157:H7 EDL933 # 1 457 1 457 457 953 100.0 0 MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLDP QPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTTAGM ATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEADEYDCAFFDKRSKFVHYCPRT LILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTMAMGCWSEQEL VGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLVGEHNMHNGLMAIAAARHVGVAPAD AANALGSFINARRRLELRGEANGVTVYDDFAHHPTAILATLAALRGKVGGTARIIAVLEP RSNTMKMGICKDDLAPSLGRADEVFLLQPAHIPWQVAEVAEACVQPAHWSGDVDTLADMV VKTAQPGDHILVMSNGGFGGIHQKLLDGLAKKAEAAQ >gi|296918695|gb|GG773005.1| GENE 99 101779 - 102330 748 183 aa, chain - ## HITS:1 COG:ECs5211 KEGG:ns NR:ns ## COG: ECs5211 COG3028 # Protein_GI_number: 15834465 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 271 100.0 7e-73 MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLD ADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLEN LRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKEGNKPPKSARQIFQYLRELAE NEG >gi|296918695|gb|GG773005.1| GENE 100 102424 - 103776 1410 450 aa, chain + ## HITS:1 COG:ECs5212 KEGG:ns NR:ns ## COG: ECs5212 COG0312 # Protein_GI_number: 15834466 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 875 98.0 0 MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEF NSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARYTSPDPYAGVADKELLAFD APDLDLFHPADVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQ GYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLS TMKAPVIFANEVATGLFGHLVGAIAGGAVYRKSTFLLDSLGTQILPDWLTIEEHPHLLKG LASTPFDSEGVRTERRDIVKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGLSF EQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWR NIVTVGNDIETRSNIQCGSVLLPEMKIAGQ >gi|296918695|gb|GG773005.1| GENE 101 103960 - 104346 509 128 aa, chain + ## HITS:1 COG:STM4439 KEGG:ns NR:ns ## COG: STM4439 COG3783 # Protein_GI_number: 16767685 # Func_class: C Energy production and conversion # Function: Soluble cytochrome b562 # Organism: Salmonella typhimurium LT2 # 1 128 1 128 128 175 85.0 2e-44 MRKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADNAAQVKDALTKMRAAAL DAQKATPPKLEGKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTR NAYHQKYR >gi|296918695|gb|GG773005.1| GENE 102 104391 - 104855 406 154 aa, chain - ## HITS:1 COG:ECs5214 KEGG:ns NR:ns ## COG: ECs5214 COG0602 # Protein_GI_number: 15834468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 325 100.0 1e-89 MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLN DTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNAAQMQVV DLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR >gi|296918695|gb|GG773005.1| GENE 103 105013 - 107151 2491 712 aa, chain - ## HITS:1 COG:nrdD KEGG:ns NR:ns ## COG: nrdD COG1328 # Protein_GI_number: 16132060 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Escherichia coli K12 # 1 712 1 712 712 1504 99.0 0 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNSSLLNENANK DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY NKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIF KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFS LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF TCPKCGNHDTSRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG >gi|296918695|gb|GG773005.1| GENE 104 107545 - 109200 1386 551 aa, chain - ## HITS:1 COG:ECs5216 KEGG:ns NR:ns ## COG: ECs5216 COG0366 # Protein_GI_number: 15834470 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 551 1 551 551 1121 97.0 0 MTHLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQRLDYLHKLGVDAIWLTPFYVSPQ VDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMVFNHTSTQHAWFREALNKE SPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRA ELKKVCEFWANRGVDGLRLDVVNLISKDPRYPEDLDGDGRRFYTDGPRAHEFLHEMNRDV FTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFNFHHLKVDYPGGEKWTLAKPDFVAL KTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMVLHGMQGTPYI YQGEEIGMTNPHFTRITDYRDVESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWT NGDNAGFTAGEPWIGLGDNYQEINVEAALADESSVFYTYQKLIALRKQEAVLTWGDYQDL LPNSPVLWCYRREWKGQTLLVIANLSRETQPWQPGKMLGNWQLVMHNYEEASPQPCAMTL RPFEAVWWLQK >gi|296918695|gb|GG773005.1| GENE 105 109250 - 110668 1520 472 aa, chain - ## HITS:1 COG:ECs5217_2 KEGG:ns NR:ns ## COG: ECs5217_2 COG1263 # Protein_GI_number: 15834471 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 92 472 1 381 381 687 99.0 0 MSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNA GQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARQNMKWHEQLISHFAEIFFPLLPA LISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVK KMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWNFGMFSIAKVGYQAQVIPALLAGLA LGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVRHLMTGSF APIGAALFGFLYAPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQGSAVIGIII SSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMAN GIGVGGLPGILSIQPSYWQVFALAMAIAIIIPIVLTSFIYQRKYRLGTLDIV >gi|296918695|gb|GG773005.1| GENE 106 110790 - 111737 767 315 aa, chain - ## HITS:1 COG:treR KEGG:ns NR:ns ## COG: treR COG1609 # Protein_GI_number: 16132063 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 315 1 315 315 619 99.0 1e-177 MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT GRSEPQQIIIPATLS >gi|296918695|gb|GG773005.1| GENE 107 112116 - 114812 2635 898 aa, chain + ## HITS:1 COG:ECs5219 KEGG:ns NR:ns ## COG: ECs5219 COG0474 # Protein_GI_number: 15834473 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli O157:H7 # 1 898 1 898 898 1807 99.0 0 MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNAAVPPSLSAHCLKMAVMPEEELWKTFDTH PEGLNLAEVESAREQHGENKLPAQQPSPWWVHLWVCYRNPFNILLTILGAISYATEDLFA AGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLV PGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKAATTRQPEHSNPLECDTLC FMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQESEPNAFQQGISRVSMLLIRFMLVMA PVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDA IQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTA VLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQ VRHNGEIVPLDDTMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGY IAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLS DDELANLAQRTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDG AVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL PFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFD ILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIM TVIVMIVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ >gi|296918695|gb|GG773005.1| GENE 108 115018 - 115404 537 128 aa, chain - ## HITS:1 COG:ECs5220 KEGG:ns NR:ns ## COG: ECs5220 COG0251 # Protein_GI_number: 15834474 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli O157:H7 # 1 128 14 141 141 228 100.0 2e-60 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAI VEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIE IEAIAVRR >gi|296918695|gb|GG773005.1| GENE 109 115500 - 115961 441 153 aa, chain - ## HITS:1 COG:ECs5221 KEGG:ns NR:ns ## COG: ECs5221 COG1781 # Protein_GI_number: 15834475 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 304 100.0 5e-83 MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIK IENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN >gi|296918695|gb|GG773005.1| GENE 110 115974 - 116909 1074 311 aa, chain - ## HITS:1 COG:ECs5222 KEGG:ns NR:ns ## COG: ECs5222 COG0540 # Protein_GI_number: 15834476 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 613 100.0 1e-176 MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSF ETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFS GNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKF DGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSE YANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQAL LALVLNRDLVL >gi|296918695|gb|GG773005.1| GENE 111 117183 - 117671 232 162 aa, chain - ## HITS:1 COG:STM4463 KEGG:ns NR:ns ## COG: STM4463 COG1438 # Protein_GI_number: 16767708 # Func_class: K Transcription # Function: Arginine repressor # Organism: Salmonella typhimurium LT2 # 1 162 1 162 162 280 87.0 1e-75 MKEYDDYSAKEKKQLAVCQRLITEKSYLSQEEIRRDLQNHGFDSISQSTVSRLLKLLGVI KIRNTKGQKIYSVNPQLLPTPDAGRSVAEMVLSVEHNGEFILIHTVAGYGRAVARILDFH ALPEILGVIAGSNIVWVAPRVVKRTALVHKQINYLLKLNIYS >gi|296918695|gb|GG773005.1| GENE 112 117787 - 119190 1190 467 aa, chain - ## HITS:1 COG:STM4464 KEGG:ns NR:ns ## COG: STM4464 COG1288 # Protein_GI_number: 16767709 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 467 1 467 467 712 89.0 0 MGKFKFPTAYTILFVLIALVAAMTWIVPAGKYQMVTNAALGKEVPVAGTYAPVEAQPQGI TAVLLAPIDGLYNHQTYTAGAIDVALFVLIIGGFLGVVNKTGAIDAGIERVTTRLNGREE WMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFDPLVAAATVLLGSGIGTLGST INPFATVIAANAAGIPFTQGILLRVILLLVGYVICVYWVMRYARKVRNSPESSIVADKMA ENQAHFLGNRSETMLEFTPTRKAILILFAASFAFMIYGVAVLGWWMAEISAVFLAAAVIV GVIARMGEETFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMITHTILHSAENLVSGLS TTVFINVTYWLEVLLSFLVPSSSGLAVLTMPIMAPLADFAHVQRDLVVTAYQSASGVVNL ITPTSAVVMGGLAIARVPWVRYLRWVAPLLLILTMLNMIVLSIAAMI >gi|296918695|gb|GG773005.1| GENE 113 119247 - 120251 943 334 aa, chain - ## HITS:1 COG:STM4465 KEGG:ns NR:ns ## COG: STM4465 COG0078 # Protein_GI_number: 16767710 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Salmonella typhimurium LT2 # 1 334 1 334 334 637 91.0 0 MATSLKNRNFLKLLDYTPAEIQYLIDLAINLKAAKKSGNEKQTLVGKNIALIFEKSSTRT RCAFEVAAFDQGAQVTYIGPSGSQIGHKESMKDTARVLGRMYDGIEYRGYGQNIVEELGE FAGVPVWNGLTNEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAK MGMDIRLVAPKSFWPDEALVTQCREIASVTGARITLTEDVEEGVYDVDFLYTDVWVSMGE PKEAWAERVSLMTPYQINQQVITATRNPEVKFMHCLPAFHNEHTTVGREIEMAYGLKGLE VTDEVFESAHSIVFDEAENRMHTIKAVMVATLGD >gi|296918695|gb|GG773005.1| GENE 114 120262 - 121206 877 314 aa, chain - ## HITS:1 COG:STM4466 KEGG:ns NR:ns ## COG: STM4466 COG0549 # Protein_GI_number: 16767711 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Salmonella typhimurium LT2 # 1 305 1 305 310 545 89.0 1e-155 MENKPTLVIALGGNALLKRGEPLEAEIQRKNIDLAAKTIAQLTQHWRVVLVHGNGPQVGL LALQNSAYAHVAPYPLDILGAESQGMIGYMLQQALKNQLPQREISVLLTQVEVDANDPAF SNPTKYIGPIYDHAQTQVLQAEKGWVFKADGHSFRRVVPSPQPKRIVERDAIQTLIAHDH LVICNGGGGVPVVEKADGYHGIEAVIDKDLSAALLASQIHADALLILTDADAVYLDWGKP TQRPLAQVTPELLNEMQFDAGSMGPKVTACAKFVSQCRGIAGIGSLADGPEILAGDKGTL IRLDTPITTLDPFL >gi|296918695|gb|GG773005.1| GENE 115 121217 - 122437 630 406 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988789|ref|ZP_01820204.1| 50S ribosomal protein L33 [Streptococcus pneumoniae SP6-BS73] # 6 406 8 409 409 247 36 3e-64 MEKHYVGSEIGQLRSVMLHRPNLSLKRLTPSNCQELLFDDVLSVERAGEEHDIFANTLRQ QGIEVLLLTDLLTQTLDIPEAKSWLLETQISDYRLGPTFATDVRTWLAEMSHRDLARHLS GGLTYSEIPASIKNMVVDTHDINDFIMKPLPNHLFTRDTSCWIYNGVSINPMAKPARQRE TNNLRAIYRWHPQFAGGEFIKYFGDENINYDHATLEGGDVLVIGRGAVLIGMSERTTPQG IEFLAQALFKHRQAERVIAVELPKHRSCMHLDTVMTHIDIDTFSVYPEVVRPDVNCWTLT PDGHGGLKRTQESTLLHAIEKALGIDQVRLITTGGDAFEAEREQWNDANNVLTLRPGVVV GYERNIWTNEKYDKAGITVLPIPGDELGRGRGGARCMSCPLHRDGI >gi|296918695|gb|GG773005.1| GENE 116 123115 - 123567 502 150 aa, chain + ## HITS:1 COG:ECs5229 KEGG:ns NR:ns ## COG: ECs5229 COG2731 # Protein_GI_number: 15834483 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli O157:H7 # 1 148 4 151 153 263 84.0 1e-70 MIVGNIHHLQSWLPEELREAIEYIKSHVSDETAKGKHAIDGDRLFYLISEDTTEPGELRR AEYHARYLDIQIVLKGQEGMTFSTQPAGVPETDWLADKDIAFIGQGIDEKTVILNEGDFV VFYPGEVHKPLCAVGAPAQVRKAVVKLLKS >gi|296918695|gb|GG773005.1| GENE 117 123613 - 124617 1012 334 aa, chain - ## HITS:1 COG:ECs5231 KEGG:ns NR:ns ## COG: ECs5231 COG0078 # Protein_GI_number: 15834485 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 640 94.0 0 MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEARLTGKNIALIFEKDSTRTR CSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEY AGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALT GLDLRLVAPQACWPEAALVAECSALAQKHGGKITLTEDIASGVKGADFIYTDVWVSMGEP KEKWAERIALLRDYQVNSKMMALTGNSQVKFLHCLPAFHDEQTTLGKKMAAEFGLYGGME VTDEVFESPASIVFDQAENRMHTIKAVMVATLAK >gi|296918695|gb|GG773005.1| GENE 118 124779 - 125195 774 138 aa, chain + ## HITS:1 COG:ECs5232 KEGG:ns NR:ns ## COG: ECs5232 COG3076 # Protein_GI_number: 15834486 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 187 99.0 5e-48 MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEV TDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNG EDGDDEDFVDEDDDGIRH >gi|296918695|gb|GG773005.1| GENE 119 125384 - 125887 491 167 aa, chain - ## HITS:1 COG:STM4473 KEGG:ns NR:ns ## COG: STM4473 COG0454 # Protein_GI_number: 16767718 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 167 1 167 167 265 82.0 4e-71 MNVVASPALRLRKLTVADNPAIAHVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGH AYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMG FKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLRKL >gi|296918695|gb|GG773005.1| GENE 120 126080 - 127267 799 395 aa, chain + ## HITS:1 COG:STM4474 KEGG:ns NR:ns ## COG: STM4474 COG4269 # Protein_GI_number: 16767719 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 395 1 395 395 467 64.0 1e-131 MNDVNIGKDNSRHSFVFTGKGGEYFLICLVNFSLTIITLGIYGPWALIKCRRYIYQHVTL KGQPFSYKGTGGAIFVSMLLIVVVYLLSISCFAGQHFALGLFLFALLICGIPCMAVKSLQ YQANMTSLNDIRFGFNCSMMRAWWVMLGLPVLLALVFWFALYLIAQVTTSIGGLFFNLVA LSLLSAIGLGVVHGITYSKWMPLLGNNATFGIHKFSIQVNVKECIKGCMLAILTMVPFII VIGIMIAPVFQQLMMMTMLGRSDAGSEFVLQYYPQIMASYFLYFVAILVFASYLYVTLRN LFLNNLTLANGTIRFHSSVTAIGMLLRMLAVLMGSSITCGLAYPWLKMWMVSWIANNTHV QGDLDSLELTNDDKPQDSGSLMWISRGIMPYVPFI >gi|296918695|gb|GG773005.1| GENE 121 127307 - 130090 3292 927 aa, chain - ## HITS:1 COG:valS KEGG:ns NR:ns ## COG: valS COG0525 # Protein_GI_number: 16132080 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 925 1 925 951 1891 99.0 0 MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMD TMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAE SGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR TAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDP RYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINI LTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPH DLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDI QDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSA LWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHT VYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEK QFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQD CGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELT KPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQP FPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNEN RGFLQTLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAKIE GEISRIENKLANEGFVARAPEAVIAAS >gi|296918695|gb|GG773005.1| GENE 122 130090 - 130533 430 147 aa, chain - ## HITS:1 COG:ECs5236 KEGG:ns NR:ns ## COG: ECs5236 COG2927 # Protein_GI_number: 15834490 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, chi subunit # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 290 100.0 9e-79 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYE DSLKQLARERYKAYRVAGFNLNTATWK >gi|296918695|gb|GG773005.1| GENE 123 130791 - 132302 1707 503 aa, chain - ## HITS:1 COG:ECs5237 KEGG:ns NR:ns ## COG: ECs5237 COG0260 # Protein_GI_number: 15834491 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Escherichia coli O157:H7 # 1 503 1 503 503 1002 100.0 0 MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTL LLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGR NNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAI AAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVG QGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAV YGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLC DVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRL PLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKG ATGRPVALLAQFLLNRAGFNGEE >gi|296918695|gb|GG773005.1| GENE 124 132590 - 133669 998 359 aa, chain + ## HITS:1 COG:ECs5238 KEGG:ns NR:ns ## COG: ECs5238 COG0795 # Protein_GI_number: 15834492 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 359 8 366 366 621 99.0 1e-178 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRH QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSV VVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTD QMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYL LFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV >gi|296918695|gb|GG773005.1| GENE 125 133669 - 134751 1457 360 aa, chain + ## HITS:1 COG:ECs5239 KEGG:ns NR:ns ## COG: ECs5239 COG0795 # Protein_GI_number: 15834493 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 360 2 361 361 657 99.0 0 MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSV PKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAI GEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAF NENRRLQSVRYAAAAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG VVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL RSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS >gi|296918695|gb|GG773005.1| GENE 126 134912 - 136414 1377 500 aa, chain - ## HITS:1 COG:yjgR KEGG:ns NR:ns ## COG: yjgR COG0433 # Protein_GI_number: 16132085 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli K12 # 1 500 1 500 500 949 98.0 0 MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK GDLTGVAEEGTSSEKLLARLKNIGVNDWQPHTNPVVVWDIFGEKGHPVRATVSDLGPLLL ARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV GAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLL WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPTFDTEKAIQELGTGE ALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEM LQKGFQASIEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAAR QVTNQIVRGMLGSLLGGRRR >gi|296918695|gb|GG773005.1| GENE 127 136492 - 137490 752 332 aa, chain - ## HITS:1 COG:idnR KEGG:ns NR:ns ## COG: idnR COG1609 # Protein_GI_number: 16132086 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 332 1 332 332 652 98.0 0 MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLN AQSYTLGILIPSFQNQLFADILAGIESVTSVHNYQTIIANYNYDRDSEEESVINLLSYNI DGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLDKRV RRKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPD LDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGR MAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL >gi|296918695|gb|GG773005.1| GENE 128 137557 - 138876 1267 439 aa, chain - ## HITS:1 COG:idnT KEGG:ns NR:ns ## COG: idnT COG2610 # Protein_GI_number: 16132087 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 439 1 439 439 701 99.0 0 MPLIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGG LAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVL LLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLPPHPGPTAIATIFEANLGTTLLYGFI ITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAA VCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIA MIVFIIAGGGAFKQVLVDSGVGQYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAIT TAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVME TLISIMGLLGVLAINAVLH >gi|296918695|gb|GG773005.1| GENE 129 138941 - 139705 839 254 aa, chain - ## HITS:1 COG:idnO KEGG:ns NR:ns ## COG: idnO COG1028 # Protein_GI_number: 16132088 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 254 1 254 254 510 100.0 1e-144 MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQA VAAPFNVTHKHEIDAAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTA VFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHN IQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVN GHLLFVDGGMLVAV >gi|296918695|gb|GG773005.1| GENE 130 139729 - 140760 871 343 aa, chain - ## HITS:1 COG:idnD KEGG:ns NR:ns ## COG: idnD COG1063 # Protein_GI_number: 16132089 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 343 1 343 343 708 99.0 0 MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAP MVLGHEVIGKVIHSDSSELHEGQTVAINPSKPCGHCKYCIEHNENQCTEMRFFGSAMYFP HVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGP IGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDHWKAEKGYFDVSF EVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLKGSFRFTSEFNTAV SWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF >gi|296918695|gb|GG773005.1| GENE 131 140977 - 141540 410 187 aa, chain + ## HITS:1 COG:idnK KEGG:ns NR:ns ## COG: idnK COG3265 # Protein_GI_number: 16132090 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Escherichia coli K12 # 1 187 1 187 187 378 99.0 1e-105 MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPW LERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRA GHFMPVALLKSQFEALERPQEDEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGS ASDQRCE >gi|296918695|gb|GG773005.1| GENE 132 141544 - 142563 1195 339 aa, chain - ## HITS:1 COG:yjgB KEGG:ns NR:ns ## COG: yjgB COG1064 # Protein_GI_number: 16132091 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli K12 # 1 339 15 353 353 677 99.0 0 MSMIKSYAAKEAGGELEVYEYDPGELKPQDIEVQVDYCGICHSDLSMIDNEWGFSQYPLV AGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMN RGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGL GHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKTLAGQFDLIINTVN VSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFA ARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF >gi|296918695|gb|GG773005.1| GENE 133 142993 - 143919 760 308 aa, chain - ## HITS:1 COG:YPO0961 KEGG:ns NR:ns ## COG: YPO0961 COG0582 # Protein_GI_number: 16121264 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Yersinia pestis # 215 306 2 93 102 80 44.0 4e-15 MTFEQLLEEYFFARLLRPDTQSCYCTAVNQFTHWRNVLPAEVTPHMVLEWRHYLLNVRCI KPVSWNHYMRHMRALYNFAIEQGLLEQFINPFQKTSLRESRKKKKTLTREQILASRKVLN QFIEREKMQRGYRSPLYPAWFWLTVVETFNYTAIRLNQLIHLRVRDIDLVHDTLFIQIEG SKSHDEHIVPIASRLRPYLEHLLEEAKTKGIRADDQLFNINRFSRRTLRQGKPMTENQVS YFFAKLSDACHSRFPSHRYRHTVATELMQKPEQNLYVTQKLLGHRDIKVTLSYIEHNVEM LRSCVERD >gi|296918695|gb|GG773005.1| GENE 134 143909 - 145528 828 539 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4900 NR:ns ## KEGG: EC55989_4900 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 539 1 539 539 1085 100.0 0 MRIWLTRKKQNTTPSTGEPDVTEGWLHPESAQTLLAETTRQQLIQFIRQSTALPASLFER FWLIPIHRFAELAQLFPASENHHHSHAGGLLDHSLEAACYAARLRQSYLFPPDAAPEDQA AQSERWTTVIIYAALLHDLGKLITDIEVENFSGKRWFPWHGPLTQPYRFRYLPQRDYLRH PAAAVLLLTQLIPPESLDWLAADTAALSTLLHCLNGQYQYAGLAGELVQKADRASVAFNL GGDPVKAIHRPQTSLPQQIITSLRDLLAHEFRLNNPNGGSDGWLTEEALWLVSKNAADAV RGWLLCQGLDAVPQHNMRLFDEMQAHQLLIPCEDKAIWHCRIEASGGWSSELTLLRFSPS LIWEDPQQRPATFIGTVTPIAEIRNETEAVIATNIEVEQPSPLPEQNETALSGEAFWQWL VRNVQAQHLEVNEPNARIHTVAGSVFLVTPGIFKLWLSTCGQNVPEEYWREVQKKFQNLN LHRKQKNGLNIWHCAVVGPRRCSRLKGYLLDDPTPLFGDDVPFNNPHLLLSEGEDTHDL >gi|296918695|gb|GG773005.1| GENE 135 145831 - 146742 623 303 aa, chain - ## HITS:1 COG:mlr6154 KEGG:ns NR:ns ## COG: mlr6154 COG4227 # Protein_GI_number: 13475143 # Func_class: L Replication, recombination and repair # Function: Antirestriction protein # Organism: Mesorhizobium loti # 7 297 25 315 320 211 40.0 1e-54 MNRSNDLYQKVTDEIIAALEKGVLPWVRPWREGEPVVPMNALSGRFYHGINIPLLWNSAE RQGYENDRWLTFTQIRNAGGNIHKGERSTLAVFYLPQQREVVDSNGNTVLDADGNPKVMS YAVVREFRLFNIQQCEGLPEAFSQPVVMVDDPIAAAEQVTRQSAVMITHRRQNRAYYSPG RDCIIMPHPEQFTSREDYYGTLLHELTHATGHASRLNRDGITAGKHTFGDPTYSFEELVA EMGAAFLCAHVGIQSKLQHDSYIASWLKVLQQDKKAIFRASGLARNACEYLLERAQQPLA LSA >gi|296918695|gb|GG773005.1| GENE 136 146828 - 147121 272 97 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4902 NR:ns ## KEGG: EC55989_4902 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 97 12 108 108 173 100.0 2e-42 MPTSSYPEAKSLSLSVSTEAWEKVVSFPPDPSQEDDRLENLIVATMLTFKSAGPDRKSIN FGLYCLPSDGSSNVPLMTPLRLTLEDNHLLVTALHTS >gi|296918695|gb|GG773005.1| GENE 137 147489 - 148361 706 290 aa, chain - ## HITS:1 COG:Z5892 KEGG:ns NR:ns ## COG: Z5892 COG3440 # Protein_GI_number: 15804871 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Escherichia coli O157:H7 EDL933 # 1 281 12 292 294 303 50.0 2e-82 MTSLETLQSANSNVSVWRQGDVCAPHKPLLLLYVLSQYKAGHPRLFNYGLEIHEPLTRLL KEFGPKRRTDYPNMPFWRLRTDGFWEIANAEGCKPRRGNTQPTKKELIDNQVAGGFDETA YQQLLAHPEVIDQLAQQILMDRFPESIQRILANQLGLDFIDRSKSRDPRFRDIVLRAYHS RCAFCGYDLRLDGALVGIEAAHIHWKTYGGPCVVNNGLALCSLHHDAFDMGAFGLDENLT IRISGGVSRSPVVDNLFWQRNGQQLHLPHDKSLWPTEQYVGWHRKQIFKA >gi|296918695|gb|GG773005.1| GENE 138 148606 - 150429 389 607 aa, chain - ## HITS:1 COG:no KEGG:Sbal195_0370 NR:ns ## KEGG: Sbal195_0370 # Name: not_defined # Def: hypothetical protein # Organism: S.baltica_OS195 # Pathway: not_defined # 4 606 3 624 625 662 54.0 0 MLDNSTFDYKPHLKSAYIDPIRTVTVIDDEYPTIDDLISPTKDSFSQDNISRLKDIIDIS RSEEYNWLLDVYNGKEKKIQEGTVSNRLYHSDLLILDYHLDGEDSGYCKKSIDIIKNLSE NRHFNIVAVHTKGYDGQKGSVNEVLIDIITSLQERPAISILNDKIKSRIDDALDEWEIED PSIREDLINSVSTLDLLFLINKFGSNLSSGCFDYEVLDVFHNIFDQKPDNINISKILIFK WISSEKLHRYADQFNNKTSKFFDWGTNENHNWIKTEDLFITVLGKKDTPISDIPNQLLEA LSNSKPHPHKLILSKLRSEIESNGSYAASNIINKKFLQAAWLKELLQKEDEYAIKTAAWQ AVTKLWEELAYEIKQSLDDFTINLVRDLKKINSPLNYFIEKSTLDAELEQIKHANCFSCS KKITAHHLVTGHVLEFNNNHWLCLTPMCDLVPGQKNGNSLLPVTLVKMYDAKVALNNTRK NMQNELKLPNLPEINEDESIRQILNYSTQNNLLFVQSEHDGKIHILSFTVGLDGKANPKA MDCYVENQGIFSEDKIIALKYAKPTENEMNIISVEAKIVAELRYEYALNLLGRLGVSKSR VGLDFIN >gi|296918695|gb|GG773005.1| GENE 139 150422 - 152926 253 834 aa, chain - ## HITS:1 COG:no KEGG:Sbal195_0371 NR:ns ## KEGG: Sbal195_0371 # Name: not_defined # Def: histidine kinase # Organism: S.baltica_OS195 # Pathway: not_defined # 8 834 163 989 989 1003 62.0 0 MECSDNNELITVIPEMFDALMGNLWGDGDDILRDNRIEQAWENYSELERNENNYITKEAI ENTVINAFFEERHFQSWPVWNNKTTHGTAMFIAGIHDDLIAQLSTDAGSEAQGAEVRAKE RFLQTLNSFVNPFKREGEEQITDFNTSVVAWNGNLQRFIIDEVRNFDISNFDQLEHIVEG SIDESGLFSGKVKAFGEWFDNITVKPKSAYKTRKDTRFGPFFLRLGTFEVIRKNSTLSDE QHATFDRIRDQFGGVMVFRDDLRVMPYGREDNDFFEIEKRRSKNAGLYMFSNRACFGGVC ITKEHNPNLRDKAGREGIIDNKASKLFREIVENILIEIAKRFIGRASNIRDEKLEEINAK HAALKADEDRKKLLRKEQRRIKTSIQRDRISLEHLRNEFYEISQLLSDKNNFKELEELLQ LKENIDVLDGTLKNLSLGSVPRNLGSIEKDYRQYRDLEIDAKSLLKQINNSVYSALDHFT VKDDYSIAEKDFRSKAAILHAKIRKFSNKGRNILKEEMLRFEKITNNTNKAFHEKTSQYL SDLQENRTSLKKTLENLDLAYQIQDIEIGQTYAPYITALESLREEIDLEGLAISSVNENT RLKKQVEQVNALAQLGITVEIIGHEIEGFDMTIERGINRLSSTNLDEYQKNALSSITQAH QSLSDSWRFLSPLKLSGDKVRAFLSGKDIFDYVNHFFNSKFEKDSIEFSCSTNFLDISLY DQPARIYPVFINLVNNSRYWVKETKEERRIIRLDVLDGLIYVSDNGPGVDPDDVSELFTI FFSKKQRGGRGVGLYLCKQNLAVSGHSIFYETRTEKKILNGANFVINFKGIKNA >gi|296918695|gb|GG773005.1| GENE 140 153485 - 154681 -26 398 aa, chain - ## HITS:1 COG:HP0051 KEGG:ns NR:ns ## COG: HP0051 COG0270 # Protein_GI_number: 15644682 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Helicobacter pylori 26695 # 2 391 4 350 355 162 33.0 1e-39 MKAIDLFAGAGGFSLSAHNTGAIDVVAAIEFDSAAANTYRKNMLERLEHKTELLQEDILL VGPKKLRKKIKLKKGELDMILGGPPCQGFSSHRINDAGVDDPRNKLLLRYFDFVCEFKPK AFLVENVSGLLWKRHEAHLKRFKFLASKNGYTLIHCDVLNARDYGVPQNRKRVFIAGVRN DILKKRNNIEFPPQATHFNPNSNEVKNNSKNTWRTASSVFEKMNDNLIQRYISEYFLKHT SYSIDEAQELLENLEYQDAPISEKDPCNIHMIPTERMEERFRATKLNGSRSDAGKEFELK CHSNGYAGHKDVYGRIMIHLPANTITTGCNNPSKGRFIHPWENHGITLRHAARLQTFPDD YIFWGNATEQARQIGNAVPPMLGTILINALLNIIAPNR >gi|296918695|gb|GG773005.1| GENE 141 154954 - 155454 -106 166 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237703956|ref|ZP_04534437.1| ## NR: gi|237703956|ref|ZP_04534437.1| predicted protein [Escherichia sp. 3_2_53FAA] predicted protein [Escherichia sp. 3_2_53FAA] # 1 166 33 198 198 311 100.0 1e-83 MITGIDLVVVEKSTGIVFLCQLKHQELYGADLHAKHVRTTRLKKQASDWLTSMNNWLNSI TEIELRKSLQITKHVPKLTTYKLFITKHYAYPLKELSDEDTAYCNWAQFIYAIQLIDDDK GKRKDSISSLILKLKTLNQEANIEYLHEPTSKWMIKNLTFSLEQER >gi|296918695|gb|GG773005.1| GENE 142 155488 - 156525 553 345 aa, chain + ## HITS:1 COG:BH2520 KEGG:ns NR:ns ## COG: BH2520 COG3335 # Protein_GI_number: 15615083 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 168 334 20 188 188 75 29.0 1e-13 MLSNMKIFITEQQKAELERLHDSSRDGRVRDRIKAILLASEGWSSAMIAQALRLHQTTID HHISEFLNKGKLKPENGGSDSKLSAEQTAFLISQLSDNLFHHTRDVIAFVTRTWNIIFSI PGMNKWLHRNGFTYKKPSGVPHKLSEEKQRQFIEYYKELKTTVGDEPILFIDGVHPTQAT KISYGWIRKGQKKAVKTTGSRTRLNIMGALNLKALTSPLICEYKTINEYNVSLFLNEIRK VYPDYNQKIHVILDGAGYHRSQLVKDWAEVVNIRLHYLPPYSPNLNPIERMWKLMNEHAR NNRYFSNTREFREAISVFFNQTLPDIADSLTSRINDHFQVLTPAS >gi|296918695|gb|GG773005.1| GENE 143 158053 - 158349 127 98 aa, chain + ## HITS:1 COG:no KEGG:ROD_33711 NR:ns ## KEGG: ROD_33711 # Name: not_defined # Def: putative transcriptional regulator # Organism: C.rodentium # Pathway: not_defined # 1 98 1 98 98 179 97.0 4e-44 MNTVYPLKTLNQLRPLLIGFRKVNGLTQKDIAERLGVTQQTYARLEANPGSASIERLFKV FTVLGVEIELSSSLASSAINSYKLTDKYRDSLARREKW >gi|296918695|gb|GG773005.1| GENE 144 159807 - 160118 209 103 aa, chain + ## HITS:1 COG:NMA1635 KEGG:ns NR:ns ## COG: NMA1635 COG3177 # Protein_GI_number: 15794529 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 1 101 259 359 375 106 51.0 1e-23 MLEAVESTSRWTTDKISIVRALMAETTEYVREKLPKIYTHELVQALFAQPYCRIDNLVER GVAKRQTASTYLKQLVEIGVLEEMSVGREKLYINTRLLQELNQ >gi|296918695|gb|GG773005.1| GENE 145 160169 - 160798 222 209 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4913 NR:ns ## KEGG: EC55989_4913 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 209 1 209 209 342 100.0 5e-93 MAALPDIRKDTSLRYLSSRIELLEERARWQQRQSPEETKPETSGLNTVPGKISPGTESGL SRKPRPGGLVSNQDRASVRTVSTDIRNSTTARANSSPPNWPPEIPLTNPEKQLVLQAMQN LPPPLRQDVLDDAAQRVARGGIQNPLAYLLAMLRKAQGGEFNQYRRGKATVPEFVPHVVS EPKIPAEPRKKRDISKLVAEIRAQCLEKK Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:54:54 2011 Seq name: gi|296918694|gb|GG773006.1| Escherichia coli MS 110-3 genomic scaffold Scfld175, whole genome shotgun sequence Length of sequence - 869 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 43 - 867 465 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|296918694|gb|GG773006.1| GENE 1 43 - 867 465 274 aa, chain - ## HITS:1 COG:ECs1208 KEGG:ns NR:ns ## COG: ECs1208 COG2801 # Protein_GI_number: 15830462 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 274 23 296 296 528 97.0 1e-150 IAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGIRV ARCTVARLMAVMGLAGVLRGKKVRTTVSRKTVATGDRVNRQFVAERPDQLWVADFTYVST WQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVS LAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVD WYNNRRLLGRLGHTPPAEAEKAYYASIGNDDLAA Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:55:06 2011 Seq name: gi|296918693|gb|GG773007.1| Escherichia coli MS 110-3 genomic scaffold Scfld182, whole genome shotgun sequence Length of sequence - 29904 bp Number of predicted genes - 26, with homology - 26 Number of transcription units - 9, operones - 6 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 144 - 203 6.0 1 1 Op 1 46/0.000 + CDS 283 - 666 432 ## COG0690 Preprotein translocase subunit SecE 2 1 Op 2 45/0.000 + CDS 668 - 1213 633 ## COG0250 Transcription antiterminator + Term 1248 - 1298 11.4 + Prom 1221 - 1280 6.0 3 2 Op 1 55/0.000 + CDS 1372 - 1800 705 ## PROTEIN SUPPORTED gi|15804573|ref|NP_290614.1| 50S ribosomal protein L11 4 2 Op 2 43/0.000 + CDS 1804 - 2508 1148 ## PROTEIN SUPPORTED gi|15804574|ref|NP_290615.1| 50S ribosomal protein L1 + Prom 2646 - 2705 3.5 5 2 Op 3 47/0.000 + CDS 2800 - 3297 798 ## PROTEIN SUPPORTED gi|15804575|ref|NP_290616.1| 50S ribosomal protein L10 6 2 Op 4 28/0.000 + CDS 3364 - 3729 562 ## PROTEIN SUPPORTED gi|15804576|ref|NP_290617.1| 50S ribosomal protein L7/L12 + Term 3731 - 3791 3.8 7 2 Op 5 58/0.000 + CDS 4093 - 8121 4095 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 + Term 8141 - 8180 7.2 8 2 Op 6 . + CDS 8198 - 12421 4851 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 12440 - 12485 5.1 - Term 12504 - 12548 4.3 9 3 Op 1 5/0.250 - CDS 12661 - 13794 956 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 10 3 Op 2 16/0.000 - CDS 13791 - 14561 754 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 11 3 Op 3 5/0.250 - CDS 14563 - 14763 258 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 12 3 Op 4 3/0.500 - CDS 14747 - 15502 727 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 13 3 Op 5 8/0.000 - CDS 15495 - 16130 681 ## COG0352 Thiamine monophosphate synthase 14 3 Op 6 4/0.500 - CDS 16130 - 18025 1918 ## COG0422 Thiamine biosynthesis protein ThiC - Prom 18195 - 18254 3.4 - Term 18195 - 18223 0.1 15 4 Tu 1 . - CDS 18258 - 18734 438 ## COG3160 Regulator of sigma D - Prom 18788 - 18847 3.2 + Prom 18551 - 18610 2.8 16 5 Op 1 5/0.250 + CDS 18829 - 19602 645 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 17 5 Op 2 4/0.500 + CDS 19642 - 20706 1219 ## COG0407 Uroporphyrinogen-III decarboxylase 18 5 Op 3 4/0.500 + CDS 20716 - 21387 615 ## COG1515 Deoxyinosine 3'endonuclease (endonuclease V) 19 5 Op 4 6/0.000 + CDS 21430 - 22020 527 ## COG3068 Uncharacterized protein conserved in bacteria + Prom 22043 - 22102 1.8 20 5 Op 5 . + CDS 22207 - 22479 415 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 22507 - 22540 3.8 21 6 Tu 1 . + CDS 22552 - 23187 446 ## c4958 hypothetical protein + Term 23411 - 23445 -0.7 22 7 Tu 1 . - CDS 23189 - 23608 377 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 23686 - 23745 8.9 + Prom 23752 - 23811 7.4 23 8 Op 1 13/0.000 + CDS 23970 - 25337 1182 ## COG0642 Signal transduction histidine kinase 24 8 Op 2 . + CDS 25334 - 26632 1199 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Term 26849 - 26881 -0.5 25 9 Op 1 17/0.000 - CDS 26670 - 27959 1510 ## COG0151 Phosphoribosylamine-glycine ligase 26 9 Op 2 . - CDS 27971 - 29560 1693 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) - Prom 29655 - 29714 3.6 Predicted protein(s) >gi|296918693|gb|GG773007.1| GENE 1 283 - 666 432 127 aa, chain + ## HITS:1 COG:STM4147 KEGG:ns NR:ns ## COG: STM4147 COG0690 # Protein_GI_number: 16767401 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Salmonella typhimurium LT2 # 1 127 1 127 127 184 96.0 4e-47 MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLRALAVVILIAAAGGVAL LTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVS FITGLRF >gi|296918693|gb|GG773007.1| GENE 2 668 - 1213 633 181 aa, chain + ## HITS:1 COG:STM4148 KEGG:ns NR:ns ## COG: STM4148 COG0250 # Protein_GI_number: 16767402 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Salmonella typhimurium LT2 # 1 181 1 181 181 346 100.0 1e-95 MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEELFGEVMVPTEEVVEIRGGQRRKS ERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGD KPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEK A >gi|296918693|gb|GG773007.1| GENE 3 1372 - 1800 705 142 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804573|ref|NP_290614.1| 50S ribosomal protein L11 [Escherichia coli O157:H7 EDL933] # 1 142 1 142 142 276 100 1e-73 MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVIT VYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGA DIEAMTRSIEGTARSMGLVVED >gi|296918693|gb|GG773007.1| GENE 4 1804 - 2508 1148 234 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804574|ref|NP_290615.1| 50S ribosomal protein L1 [Escherichia coli O157:H7 EDL933] # 1 234 1 234 234 446 100 1e-125 MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVR GATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDA MRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDF DADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLSASVN >gi|296918693|gb|GG773007.1| GENE 5 2800 - 3297 798 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804575|ref|NP_290616.1| 50S ribosomal protein L10 [Escherichia coli O157:H7 EDL933] # 1 165 1 165 165 311 100 2e-84 MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLL RRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPA SQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDAKEAA >gi|296918693|gb|GG773007.1| GENE 6 3364 - 3729 562 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804576|ref|NP_290617.1| 50S ribosomal protein L7/L12 [Escherichia coli O157:H7 EDL933] # 1 121 1 121 121 221 100 5e-57 MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILK AAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEV K >gi|296918693|gb|GG773007.1| GENE 7 4093 - 8121 4095 1342 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 2 1342 6 1390 1392 1582 58 0.0 MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQME LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIAGKVVAKD YIDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRL SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGIL SKDDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT DEIHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR GGVVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL SEELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK LREFIQRAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLK LGDLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP ESFNVLLKEIRSLGINIELEDE >gi|296918693|gb|GG773007.1| GENE 8 8198 - 12421 4851 1407 aa, chain + ## HITS:1 COG:ECs4911 KEGG:ns NR:ns ## COG: ECs4911 COG0086 # Protein_GI_number: 15834165 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Escherichia coli O157:H7 # 1 1407 1 1407 1407 2774 99.0 0 MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKM GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERLYRSG LASLHARVKVRITEYEKDANGELVAKTSLKDTTVGRAILWMIVPKGLPYTIVNQALGKKA ISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFN SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVL GRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYG RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL SNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANW DPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKI VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR VADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE GERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM LRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFI SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEAPA APQVTAEDASASLAELLNAGLGGSDNE >gi|296918693|gb|GG773007.1| GENE 9 12661 - 13794 956 377 aa, chain - ## HITS:1 COG:ECs4913 KEGG:ns NR:ns ## COG: ECs4913 COG1060 # Protein_GI_number: 15834167 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Escherichia coli O157:H7 # 1 376 1 376 377 751 97.0 0 MKTFSDRWRQLDWDDIRLRINGKTAADVERALNASQLTRDDMMALLSPAASGYLEPLAQR AQRLTRQRFGNVVSFYVPLYLSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREM GFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQPLAEAEYAELKQLGLDGVMV YQETYHEATYAHHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDSWRVDCYMVV EHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQAICAFRLLAPEIELSLST RESPWFRDRVIPLAINNVSAFSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQ PVWKDWDSYLGRPSQRP >gi|296918693|gb|GG773007.1| GENE 10 13791 - 14561 754 256 aa, chain - ## HITS:1 COG:thiG KEGG:ns NR:ns ## COG: thiG COG2022 # Protein_GI_number: 16131821 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Escherichia coli K12 # 1 255 26 280 281 466 98.0 1e-131 MLRIADKTFDSHLFTGTGKFASSQLMMEAIRACGSQLVTLAMKRVNLRQHNDAILEPLIA AGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAEKLV QQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVV DAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAKAFRLAVEAGLLARQSGPGSRSH FAHATSPLTGFLEASE >gi|296918693|gb|GG773007.1| GENE 11 14563 - 14763 258 66 aa, chain - ## HITS:1 COG:thiS KEGG:ns NR:ns ## COG: thiS COG2104 # Protein_GI_number: 16132237 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Escherichia coli K12 # 1 66 1 66 66 87 96.0 4e-18 MQILFNDQPMQCAAGQTVHELLEQLDQQQAGAALAINQQIVPREQWAQHIVQDGDQILLF QVIAGG >gi|296918693|gb|GG773007.1| GENE 12 14747 - 15502 727 251 aa, chain - ## HITS:1 COG:thiF KEGG:ns NR:ns ## COG: thiF COG0476 # Protein_GI_number: 16131822 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Escherichia coli K12 # 7 251 1 245 245 438 98.0 1e-123 MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADD DDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLMALQQRLTGETLKDAVAQAD VVLDCTDNMATRQEINATCVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEP ERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGC PVCGGSNADPV >gi|296918693|gb|GG773007.1| GENE 13 15495 - 16130 681 211 aa, chain - ## HITS:1 COG:ECs4916 KEGG:ns NR:ns ## COG: ECs4916 COG0352 # Protein_GI_number: 15834170 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 390 98.0 1e-109 MYQPEFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGR RYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLSAIRAAGLRLGVSTHDDMEIDVALA ARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYPTVAIGGISLARAPAVIATGV GSIAVVSAITQAADWRLATAQLLEIAGVGDE >gi|296918693|gb|GG773007.1| GENE 14 16130 - 18025 1918 631 aa, chain - ## HITS:1 COG:thiC KEGG:ns NR:ns ## COG: thiC COG0422 # Protein_GI_number: 16131824 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Escherichia coli K12 # 1 631 1 631 631 1296 98.0 0 MSATKLTRREQRAQAQHFIDTLEGSAFPNSKRIYITGTHPGVRVPMREIQLSPTLIGGSK EQPQYEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWIDARGDTEELTVRSSDYTKA RLADDGLDELRFSGVLTPKRAKAGHRVTQLHYARKGIITPEMEFIAIRENMGRERIRSEV LRHQHPGMSFGARLPENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL EKVNGIAEDLTWEVFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA KWCLSHHQENFLYQRFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELT KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY AAAQTIEVGMADMSENFRARGGEIYLRKEEA >gi|296918693|gb|GG773007.1| GENE 15 18258 - 18734 438 158 aa, chain - ## HITS:1 COG:ECs4918 KEGG:ns NR:ns ## COG: ECs4918 COG3160 # Protein_GI_number: 15834172 # Func_class: K Transcription # Function: Regulator of sigma D # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 299 98.0 2e-81 MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQS LVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDDYDSSLETAIDHDNY LEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKYPA >gi|296918693|gb|GG773007.1| GENE 16 18829 - 19602 645 257 aa, chain + ## HITS:1 COG:yjaD KEGG:ns NR:ns ## COG: yjaD COG2816 # Protein_GI_number: 16131826 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Escherichia coli K12 # 1 257 1 257 257 524 98.0 1e-149 MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQLQ RRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCR ERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESG IKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGEIVIDPKELLEAHWYRYDDLPLLPPPGTV ARRLIEDTVAMCRAEYE >gi|296918693|gb|GG773007.1| GENE 17 19642 - 20706 1219 354 aa, chain + ## HITS:1 COG:hemE KEGG:ns NR:ns ## COG: hemE COG0407 # Protein_GI_number: 16131827 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Escherichia coli K12 # 1 354 1 354 354 735 99.0 0 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHA LLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDG RRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP PARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRLSEQYHR >gi|296918693|gb|GG773007.1| GENE 18 20716 - 21387 615 223 aa, chain + ## HITS:1 COG:nfi KEGG:ns NR:ns ## COG: nfi COG1515 # Protein_GI_number: 16131828 # Func_class: L Replication, recombination and repair # Function: Deoxyinosine 3'endonuclease (endonuclease V) # Organism: Escherichia coli K12 # 1 223 3 225 225 442 100.0 1e-124 MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEVTRAAMVLLKYPSLELV EYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFVDGHGISHPRRLGVASHFG LLVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLAWVWRSKARCNPLFIATGHRV SVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRYTANQP >gi|296918693|gb|GG773007.1| GENE 19 21430 - 22020 527 196 aa, chain + ## HITS:1 COG:yjaG KEGG:ns NR:ns ## COG: yjaG COG3068 # Protein_GI_number: 16131829 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 196 1 196 196 382 99.0 1e-106 MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAVFCQQTGFGDGQIYRRILDLIWETLT VKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVS KTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRA DLREAGESNIGIIFQQ >gi|296918693|gb|GG773007.1| GENE 20 22207 - 22479 415 90 aa, chain + ## HITS:1 COG:STM4170 KEGG:ns NR:ns ## COG: STM4170 COG0776 # Protein_GI_number: 16767424 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Salmonella typhimurium LT2 # 1 90 1 90 90 135 98.0 1e-32 MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG RNPQTGKEIKIAAANVPAFVSGKALKDAVK >gi|296918693|gb|GG773007.1| GENE 21 22552 - 23187 446 211 aa, chain + ## HITS:1 COG:no KEGG:c4958 NR:ns ## KEGG: c4958 # Name: yjaH # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 211 23 233 233 418 100.0 1e-116 MLAGALFLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTR EYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRA DQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDV SVAWLEAPEGSQLLLVANSDFCRWQPNEKTF >gi|296918693|gb|GG773007.1| GENE 22 23189 - 23608 377 139 aa, chain - ## HITS:1 COG:ECs4925 KEGG:ns NR:ns ## COG: ECs4925 COG3678 # Protein_GI_number: 15834179 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli O157:H7 # 1 119 48 166 188 220 99.0 8e-58 MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHNDFYAQSS ALQQQLVTKRYEYNALLAANPPDSSKINALAKEMENLRQSLDELRVKRDIAMAEAGIPRG TGMGYGGCGGGGHMGMGHW >gi|296918693|gb|GG773007.1| GENE 23 23970 - 25337 1182 455 aa, chain + ## HITS:1 COG:ECs4926 KEGG:ns NR:ns ## COG: ECs4926 COG0642 # Protein_GI_number: 15834180 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 455 4 458 458 857 98.0 0 MQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAAARQTLLEKGSVLIRALESG SRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTIVMHSNSGMVGKQLYSPQEMQQ LHPGNEEAWRRIDSADGEPVLEIYRQFQPMFATGMHRMRHMQQYAATPQAIFIAFDASNI VSAEDREQRNTLIILFALATVLLASVLSFFWYRRYLRSRQLLQDEMKRKEKLVALGHLAA GVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKPTHL ALQAVELNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRLTQVLLNLYLNAIQ AIGQHGVISVTASESGAGVKISVTDSGKGIAADQLEAIFTPYFTTKAEGTGLGLAVVHNI VEQHGGTIQVASQEGKGATFTLWLPVNITRKDPQG >gi|296918693|gb|GG773007.1| GENE 24 25334 - 26632 1199 432 aa, chain + ## HITS:1 COG:hydG KEGG:ns NR:ns ## COG: hydG COG2204 # Protein_GI_number: 16131834 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 1 426 1 426 441 787 96.0 0 MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMA EMDGIATLKEIKTLNPAIPVLIMTAYSSIETAVEALKTGALDYLIKPLDFDNLQSTLEKA LAHTHSVDAETPAVSASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVAR AIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLD EIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYY RLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRE LENAVERAVVLLTGEYISERELPLAIASTPIPLVQSQDIQPLVEVEKEVILAALEKTPPP KRAATKPKPPAS >gi|296918693|gb|GG773007.1| GENE 25 26670 - 27959 1510 429 aa, chain - ## HITS:1 COG:ECs4928 KEGG:ns NR:ns ## COG: ECs4928 COG0151 # Protein_GI_number: 15834182 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Escherichia coli O157:H7 # 1 429 1 429 429 845 98.0 0 MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQNVAIGVTDIPALLDFA QNEKVDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLEGSKAFTKDFLARHNIPTA EYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMTLEEAEAAVRDMLAGNAFGDA GHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTGGMGAYSPAPVVT DEVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKVIEFNCRFGDPETQPIM LRMKSDLVELCLAACEGKLDEKTSEWDERASLGVVMAAGGYPGDYRTGDVIHGLPLEEVA DGKVFHAGTKLADDEQVVTSGGRVLCVTALGHTVAEAQKRAYALMTDIHWDDCFCRKDIG WRAIEREQN >gi|296918693|gb|GG773007.1| GENE 26 27971 - 29560 1693 529 aa, chain - ## HITS:1 COG:ECs4929 KEGG:ns NR:ns ## COG: ECs4929 COG0138 # Protein_GI_number: 15834183 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Escherichia coli O157:H7 # 1 529 1 529 529 1025 99.0 0 MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLLAEKGLPVTEVSDYTGF PEMMDGRVKTLHPKVHGGILGRRGQDDTIMEEHQIQPIDMVVVNLYPFAQTVAREGCSLE DAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEIDANEGSLTLETRFDLAIKAF EHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNLNFIKKQDMRYGENSHQQAAFYI EENVKEASVATATQVQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGNSI LDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAIISRQFVEVIIAPSASEEALKITAAKQ NVRVLTCGQWGERVPGLDFKRVNGGLLVQDRDLGMVGAEELRVVTKRQPTEQELRDALFC WKVAKFVKSNAIVYAKNNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSSMASDAFFP FRDGIDAAAAAGVTCVIQPGGSIRDDEVIAAADEHGIAMLFTDMRHFRH Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:55:16 2011 Seq name: gi|296918692|gb|GG773008.1| Escherichia coli MS 110-3 genomic scaffold Scfld191, whole genome shotgun sequence Length of sequence - 13352 bp Number of predicted genes - 14, with homology - 14 Number of transcription units - 6, operones - 3 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 62 - 121 3.6 1 1 Op 1 4/0.000 + CDS 248 - 1507 1087 ## COG0477 Permeases of the major facilitator superfamily 2 1 Op 2 1/0.500 + CDS 1548 - 2828 1131 ## COG2733 Predicted membrane protein + Prom 2847 - 2906 1.8 3 2 Op 1 4/0.000 + CDS 2944 - 4095 1305 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 4 2 Op 2 . + CDS 4105 - 4872 394 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 5 2 Op 3 . + CDS 4869 - 5126 164 ## SDY_4595 hypothetical protein 6 2 Op 4 2/0.000 + CDS 5191 - 6051 470 ## COG3204 Uncharacterized protein conserved in bacteria 7 2 Op 5 . + CDS 6119 - 7297 855 ## COG0477 Permeases of the major facilitator superfamily + Term 7369 - 7417 1.8 - Term 7185 - 7233 2.9 8 3 Tu 1 . - CDS 7310 - 7864 482 ## COG1859 RNA:NAD 2'-phosphotransferase - Prom 7966 - 8025 4.8 + Prom 7834 - 7893 5.5 9 4 Op 1 3/0.000 + CDS 8102 - 8797 666 ## COG3314 Uncharacterized protein conserved in bacteria 10 4 Op 2 . + CDS 8794 - 9255 564 ## COG0700 Uncharacterized membrane protein 11 4 Op 3 . + CDS 9268 - 10440 1161 ## EcE24377A_4927 isoaspartyl dipeptidase (EC:3.4.19.5) 12 4 Op 4 . + CDS 10505 - 11416 748 ## COG0583 Transcriptional regulator 13 5 Tu 1 . - CDS 11409 - 11798 184 ## EcE24377A_4926 DNA replication/recombination/repair protein + Prom 12250 - 12309 6.0 14 6 Tu 1 . + CDS 12470 - 13312 430 ## EC55989_4990 hypothetical protein Predicted protein(s) >gi|296918692|gb|GG773008.1| GENE 1 248 - 1507 1087 419 aa, chain + ## HITS:1 COG:ECs5300 KEGG:ns NR:ns ## COG: ECs5300 COG0477 # Protein_GI_number: 15834554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 15 419 6 410 410 698 98.0 0 MNNHFGKGLMAGLKATHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFNADVSLAP AAVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMTQFLIARAIQ GTSICFIATVGYVTVQEAFGQTKGIRLMAIITSIVLIAPIIGPLSGAALMHFVHWKVLFA IIAIMGFISFVGLLLAMPETVKRGAVSFSAKSVLRDFRNVFCNRQFLFGAATISLSYIPM MSWVAVSPVILIDAGGLTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQ LVGLALLIIGNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNM VILMVMSVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLAGLLNRVRQHQAAELAEEQ >gi|296918692|gb|GG773008.1| GENE 2 1548 - 2828 1131 426 aa, chain + ## HITS:1 COG:yjiN KEGG:ns NR:ns ## COG: yjiN COG2733 # Protein_GI_number: 16132157 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 426 1 426 426 793 99.0 0 MNKLIELRRAKMLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVA LFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFS QPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKND RHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSD AVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEDFNRYLS ELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPE FSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPAL FPLGNF >gi|296918692|gb|GG773008.1| GENE 3 2944 - 4095 1305 383 aa, chain + ## HITS:1 COG:yjiM KEGG:ns NR:ns ## COG: yjiM COG1775 # Protein_GI_number: 16132156 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Escherichia coli K12 # 1 383 8 390 390 792 99.0 0 MSLVTDLPAIFDQFSEARQTGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCS TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE FKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHEISEDALRDAIALKNRERRAL ANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLDPRP RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAI GCSCVSPNDQRLQMLSQMVEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAI ETDYSTSDVGQLSTRVAAFIEML >gi|296918692|gb|GG773008.1| GENE 4 4105 - 4872 394 255 aa, chain + ## HITS:1 COG:ECs5297 KEGG:ns NR:ns ## COG: ECs5297 COG1924 # Protein_GI_number: 15834551 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Escherichia coli O157:H7 # 1 254 1 254 255 471 95.0 1e-133 MTYSIGIDSGSTATKGILLADGVITRRFLVPTPFRPATAITEAWETLREGLETTPFLTLT GYGRQLVDFADKQVTEISCHGLGARFLEPATRAVIDIGGQDSKVIQLDDDGNLCDFLMND KCAAGTGRFLEVISRTLGTSVEQLDSITENVIPHAITSMCTVFAESEVISLRSAGVAPEA ILAGVINAMARRSANFIARLSCEAPILFTGGVSHCQRFTHMLESHLGMPVQTHPDAQFAG AIGAAVIGQRQRKRA >gi|296918692|gb|GG773008.1| GENE 5 4869 - 5126 164 85 aa, chain + ## HITS:1 COG:no KEGG:SDY_4595 NR:ns ## KEGG: SDY_4595 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 85 1 85 85 177 100.0 1e-43 MKEYLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLCIWLTCPPGEEIQWVIP GHTESVYCQQDGGWRCIAHYGISPR >gi|296918692|gb|GG773008.1| GENE 6 5191 - 6051 470 286 aa, chain + ## HITS:1 COG:yjiK KEGG:ns NR:ns ## COG: yjiK COG3204 # Protein_GI_number: 16132154 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 286 38 323 323 546 97.0 1e-155 MTKSISLSKRIFVIVILFVIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNI SSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDER DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV NGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLAGEVIGE MSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH >gi|296918692|gb|GG773008.1| GENE 7 6119 - 7297 855 392 aa, chain + ## HITS:1 COG:yjiJ KEGG:ns NR:ns ## COG: yjiJ COG0477 # Protein_GI_number: 16132153 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 392 1 392 392 590 98.0 1e-168 MPSPSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGSFSFSQLSWIASGNY AGYLAGSLLFSFGAFHQPSRLRPFLLASALASGLLILAMAWLLPFILVLLIRVLAGVASA GMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLAGLHFDLSSQTLWQGAGALSG MMLIALTLLMPSKKHAITPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDA GSPLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLTANLLVQAICVLLTLASDSPLLL IISSLGFGGTFMGTTSLVMTIARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTS ALAGATLCGAAALFIAALISTVQLFKLQVVTS >gi|296918692|gb|GG773008.1| GENE 8 7310 - 7864 482 184 aa, chain - ## HITS:1 COG:kptA KEGG:ns NR:ns ## COG: kptA COG1859 # Protein_GI_number: 16132152 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNA:NAD 2'-phosphotransferase # Organism: Escherichia coli K12 # 1 184 35 218 218 366 100.0 1e-101 MAKYNEKELADTSKFLSFVLRHKPEAIGIVLDREGWADIDKLILCAQKAGKRLTRALLDT VVATSDKKRFSYSSDGRCIRAVQGHSTSQVAISFAEKTPPQFLYHGTASRFLDEIKKQGL IAGERHYVHLSADEATARKVGARHGSPVILTVKAQEMAKRGLPFWQAENGVWLTSTVAVE FLEW >gi|296918692|gb|GG773008.1| GENE 9 8102 - 8797 666 231 aa, chain + ## HITS:1 COG:ECs5288 KEGG:ns NR:ns ## COG: ECs5288 COG3314 # Protein_GI_number: 15834542 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 399 100.0 1e-111 MGIVMTQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWRVFDFSVLNGSFG QLPGANGATTSFRGAGGAGAKDGFLFALELAPSVILSLGIISITDGLGGLRAAQQLMTPV LKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAIITNY FSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA >gi|296918692|gb|GG773008.1| GENE 10 8794 - 9255 564 153 aa, chain + ## HITS:1 COG:ECs5287 KEGG:ns NR:ns ## COG: ECs5287 COG0700 # Protein_GI_number: 15834541 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 261 100.0 4e-70 MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKITGLLDWVGHICEPVMA LWGLPGEAATVLLAALMSMGGAVGVAASLATAGALTGHDVTVLLPAMYLMGNPVQNVGRC LGTAEVNAKYYPHIITVCVINALLSIWVMQLIV >gi|296918692|gb|GG773008.1| GENE 11 9268 - 10440 1161 390 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_4927 NR:ns ## KEGG: EcE24377A_4927 # Name: iadA # Def: isoaspartyl dipeptidase (EC:3.4.19.5) # Organism: E.coli_E24377A # Pathway: not_defined # 1 390 1 390 390 760 100.0 0 MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPDCTVVDLSGQIL CPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKT RALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIGVKCAISDHRSAAPDVYHLAN MAAESRVGGLLGGKPGVTVFHMGDSKKALQPVYDLLENCDVPISKLLPTHVNRNVPLFEQ ALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLT HIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNLSGKGEILPGNDADLLVMT PELRIEQVYARGKLMVKDGKACVKGTFETA >gi|296918692|gb|GG773008.1| GENE 12 10505 - 11416 748 303 aa, chain + ## HITS:1 COG:yjiE KEGG:ns NR:ns ## COG: yjiE COG0583 # Protein_GI_number: 16132148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 303 1 303 303 603 99.0 1e-172 MDDCGAVLHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD GCGIAWLPEYAIQQEIRSGQLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI VLS >gi|296918692|gb|GG773008.1| GENE 13 11409 - 11798 184 129 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_4926 NR:ns ## KEGG: EcE24377A_4926 # Name: iraD # Def: DNA replication/recombination/repair protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 129 1 129 129 245 97.0 4e-64 MMRPLQAVLPEISGNKTSPLRKSVCSDLLTLFNSPHSALPSLLVSGMPEWQVHNPSDKHL QSWYCRQLRSALLFHEPRIAALQVNLKEAYCHTLAISLEIMLYHDDESLTFDLVWDNGGW RSATLENVS >gi|296918692|gb|GG773008.1| GENE 14 12470 - 13312 430 280 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4990 NR:ns ## KEGG: EC55989_4990 # Name: yjiC # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 274 1 274 276 554 97.0 1e-156 MSMPLSNALQSQIITDNHFLHHPKVDSELTRKHERGRMDTENIYLPPLARGNNHNYDGKS VVEIRKLDISKESWPFNYVTETCREFNGITTTGRMLYRNLKITSALDEIYGGICKKAHAA TELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPTSQAKRWTN EQPRIDIYIDQIMTVSGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYK VIPGDENAPLKRMTLQPSSLPELFELKNGEWNYMVMLPTY Prediction of potential genes in microbial genomes Time: Thu Jul 7 12:57:09 2011 Seq name: gi|296918691|gb|GG773009.1| Escherichia coli MS 110-3 genomic scaffold Scfld202, whole genome shotgun sequence Length of sequence - 307969 bp Number of predicted genes - 297, with homology - 292 Number of transcription units - 156, operones - 61 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 15/0.000 - CDS 732 - 2000 1291 ## COG0285 Folylpolyglutamate synthase - Term 2020 - 2065 10.6 3 1 Op 3 5/0.250 - CDS 2070 - 2984 1048 ## COG0777 Acetyl-CoA carboxylase beta subunit - Prom 3078 - 3137 4.7 4 2 Op 1 5/0.250 - CDS 3140 - 3799 591 ## COG0586 Uncharacterized membrane-associated protein 5 2 Op 2 5/0.250 - CDS 3882 - 4694 543 ## COG0101 Pseudouridylate synthase 6 2 Op 3 5/0.250 - CDS 4694 - 5707 1304 ## COG0136 Aspartate-semialdehyde dehydrogenase - Term 5720 - 5760 5.1 7 2 Op 4 . - CDS 5773 - 6909 1135 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Prom 6926 - 6985 3.4 8 3 Tu 1 . + CDS 7008 - 8003 819 ## ECP_2360 flagella biosynthesis regulator; Provisional; region: flk; PRK10715 - Term 7922 - 7952 1.8 9 4 Tu 1 . - CDS 8000 - 9178 1011 ## COG0477 Permeases of the major facilitator superfamily - Prom 9297 - 9356 4.5 - Term 9334 - 9363 2.1 10 5 Tu 1 . - CDS 9443 - 10663 1369 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 10699 - 10758 3.5 + Prom 10738 - 10797 3.8 11 6 Tu 1 . + CDS 10822 - 12828 1428 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 13075 - 13116 1.9 12 7 Op 1 . - CDS 12949 - 13227 363 ## ECS88_2473 hypothetical protein 13 7 Op 2 5/0.250 - CDS 13261 - 13809 537 ## COG3101 Uncharacterized protein conserved in bacteria 14 7 Op 3 7/0.058 - CDS 13809 - 14618 893 ## COG0730 Predicted permeases 15 7 Op 4 7/0.058 - CDS 14618 - 15442 550 ## COG3770 Murein endopeptidase 16 7 Op 5 3/0.635 - CDS 15446 - 16531 1114 ## COG0082 Chorismate synthase 17 7 Op 6 . - CDS 16566 - 17498 1630 ## PROTEIN SUPPORTED gi|89109150|ref|AP_002930.1| N5-glutamine methyltransferase - Prom 17636 - 17695 2.7 + Prom 17466 - 17525 3.4 18 8 Tu 1 . + CDS 17664 - 18215 448 ## COG2840 Uncharacterized protein conserved in bacteria + Term 18441 - 18472 -0.1 19 9 Op 1 . - CDS 18412 - 19335 304 ## ECS88_2480 hypothetical protein 20 9 Op 2 4/0.481 - CDS 19337 - 19864 449 ## COG3539 P pilus assembly protein, pilin FimA 21 9 Op 3 4/0.481 - CDS 19861 - 20340 368 ## COG3539 P pilus assembly protein, pilin FimA 22 9 Op 4 7/0.058 - CDS 20337 - 20840 402 ## COG3539 P pilus assembly protein, pilin FimA 23 9 Op 5 10/0.019 - CDS 20857 - 21609 666 ## COG3121 P pilus assembly protein, chaperone PapD 24 9 Op 6 6/0.115 - CDS 21629 - 24277 2320 ## COG3188 P pilus assembly protein, porin PapC 25 9 Op 7 3/0.635 - CDS 24151 - 24900 524 ## COG3539 P pilus assembly protein, pilin FimA - Prom 24920 - 24979 9.8 - Term 25418 - 25458 10.5 26 10 Tu 1 . - CDS 25467 - 25937 415 ## COG2062 Phosphohistidine phosphatase SixA - Prom 26074 - 26133 5.7 27 11 Op 1 20/0.000 - CDS 26155 - 28299 1654 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 28 11 Op 2 3/0.635 - CDS 28299 - 29609 1323 ## COG0183 Acetyl-CoA acetyltransferase - Prom 29776 - 29835 35.9 - Term 29788 - 29828 11.1 29 12 Tu 1 . - CDS 29846 - 30130 408 ## COG3691 Uncharacterized protein conserved in bacteria - Prom 30335 - 30394 4.5 + Prom 30342 - 30401 6.2 30 13 Tu 1 . + CDS 30502 - 31842 1263 ## COG2067 Long-chain fatty acid transport protein + Term 31862 - 31908 7.2 - Term 31857 - 31888 1.0 31 14 Tu 1 . - CDS 31900 - 32655 836 ## COG2853 Surface lipoprotein - Prom 32733 - 32792 4.3 32 15 Tu 1 . + CDS 32949 - 33881 1039 ## COG2116 Formate/nitrite family of transporters + Term 33975 - 34041 30.0 + TRNA 33957 - 34031 66.4 # Arg CCT 0 0 + Prom 33959 - 34018 80.2 33 16 Tu 1 . + CDS 34193 - 35350 370 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 + Term 35502 - 35533 0.0 + Prom 35896 - 35955 5.6 34 17 Tu 1 . + CDS 36058 - 36213 87 ## + Term 36235 - 36292 2.2 35 18 Tu 1 . - CDS 36436 - 39384 482 ## ECS88_2497 endo-alpha-sialidase, phage head protein (EC:3.2.1.129) - Prom 39434 - 39493 18.1 - Term 39471 - 39499 1.0 36 19 Op 1 . - CDS 39519 - 40448 732 ## COG3561 Phage anti-repressor protein 37 19 Op 2 . - CDS 40512 - 40685 78 ## gi|315288223|gb|EFU47622.1| hypothetical protein HMPREF9539_01780 - Prom 40826 - 40885 5.2 + Prom 40850 - 40909 3.2 38 20 Tu 1 . + CDS 40949 - 41197 131 ## ECS88_2500 phage regulatory protein 39 21 Op 1 . - CDS 41488 - 41745 126 ## - Term 41752 - 41780 1.0 40 21 Op 2 . - CDS 41786 - 42004 167 ## CMS_2450 hypothetical protein - Prom 42027 - 42086 1.8 41 22 Tu 1 . - CDS 42214 - 42657 322 ## COG3600 Uncharacterized phage-associated protein - Prom 42801 - 42860 3.0 42 23 Tu 1 . - CDS 43446 - 45113 322 ## ECO111_2668 putative DNA injection protein 43 24 Op 1 . - CDS 45272 - 46687 562 ## COG1835 Predicted acyltransferases 44 24 Op 2 . - CDS 46697 - 47386 668 ## EC55989_2605 DNA transfer protein 45 24 Op 3 . - CDS 47389 - 47844 238 ## ECO111_2671 putative head assembly protein 46 24 Op 4 . - CDS 47844 - 48545 406 ## ECS88_2510 packaged DNA stabilization protein from phage 47 24 Op 5 . - CDS 48545 - 49963 555 ## EC55989_2608 packaged DNA stabilization protein from phage 48 24 Op 6 . - CDS 49973 - 50434 142 ## ECS88_2512 DNA stabilization protein from phage 49 24 Op 7 . - CDS 50415 - 50603 269 ## UTI89_C2650 hypothetical protein - Term 50610 - 50638 1.0 50 24 Op 8 . - CDS 50645 - 51898 996 ## UTI89_C2651 hypothetical protein 51 24 Op 9 . - CDS 51917 - 52810 754 ## ECS88_2515 bacteriophage protein 52 24 Op 10 . - CDS 52901 - 55099 1390 ## SPC_1298 hypothetical protein 53 24 Op 11 . - CDS 55101 - 56516 895 ## COG1783 Phage terminase large subunit 54 24 Op 12 . - CDS 56513 - 56953 231 ## ECS88_2519 hypothetical protein 55 24 Op 13 . - CDS 56956 - 57198 261 ## SARI_02653 hypothetical protein - Prom 57229 - 57288 2.4 - Term 57454 - 57483 -0.4 56 25 Tu 1 . - CDS 57499 - 58023 313 ## COG3646 Uncharacterized phage-encoded protein - Prom 58180 - 58239 3.8 - Term 58160 - 58190 2.1 57 26 Op 1 . - CDS 58366 - 58833 125 ## ECIAI39_4876 endopeptidase from phage origin (lysis protein Rz) (EC:3.1.3.16) 58 26 Op 2 . - CDS 58830 - 59306 413 ## COG4678 Muramidase (phage lambda lysozyme) 59 26 Op 3 . - CDS 59290 - 59607 183 ## ECS88_2525 lysis protein S and lysis inhibitor (holin protein) - TRNA 59856 - 59931 73.1 # Thr TGT 0 0 - TRNA 59937 - 60011 49.3 # Asn GTT 0 0 60 27 Tu 1 . - CDS 60286 - 60909 212 ## EcHS_A0302 antitermination protein Q 61 28 Tu 1 . - CDS 61091 - 61453 288 ## COG4570 Holliday junction resolvase 62 29 Op 1 . - CDS 61740 - 62009 209 ## E2348C_2523 hypothetical protein 63 29 Op 2 . - CDS 62002 - 62172 62 ## ECO111_2700 putative NinF protein 64 30 Op 1 . - CDS 62348 - 62758 365 ## ECO26_0851 putative recombination protein 65 30 Op 2 . - CDS 62730 - 62975 212 ## ECO26_3366 hypothetical protein + Prom 62725 - 62784 2.8 66 31 Tu 1 . + CDS 62974 - 63150 74 ## 67 32 Tu 1 . - CDS 63104 - 63310 245 ## ECO111_0802 hypothetical protein - Term 63322 - 63356 4.1 68 33 Op 1 . - CDS 63387 - 65267 1134 ## E2348C_0676 predicted replication protein 69 33 Op 2 . - CDS 65264 - 65371 59 ## 70 33 Op 3 . - CDS 65375 - 66235 115 ## SeSA_A0620 GP59 71 33 Op 4 . - CDS 66228 - 66374 70 ## ECO111_2710 hypothetical protein 72 33 Op 5 . - CDS 66410 - 66691 319 ## SSPA2252 transcriptional activator-regulatory protein - Term 66707 - 66746 2.6 73 34 Tu 1 . - CDS 66808 - 67038 274 ## ECO111_2612 putative antirepressor protein Cro - Prom 67064 - 67123 6.3 + Prom 67088 - 67147 3.3 74 35 Tu 1 . + CDS 67264 - 67833 240 ## COG2932 Predicted transcriptional regulator + Prom 67853 - 67912 2.0 75 36 Tu 1 . + CDS 67941 - 68144 122 ## gi|315288266|gb|EFU47665.1| hypothetical protein HMPREF9539_01825 + Term 68170 - 68209 3.1 76 37 Op 1 . + CDS 68576 - 68902 321 ## BWG_3701 lambda genome from map unit 74 backward to map unit 67 77 37 Op 2 . + CDS 68911 - 68997 101 ## 78 37 Op 3 . + CDS 68981 - 69181 127 ## ECS88_1165 restriction inhibitor protein ral (antirestriction protein) 79 38 Tu 1 . + CDS 69240 - 69662 94 ## UTI89_C2681 hypothetical protein + Term 69668 - 69695 -0.9 + Prom 69790 - 69849 4.2 80 39 Op 1 . + CDS 69960 - 70334 274 ## EFER_2078 hypothetical protein 81 39 Op 2 . + CDS 70291 - 70806 276 ## E2348C_2541 hypothetical protein 82 39 Op 3 . + CDS 70831 - 70962 71 ## E2348C_2542 predicted regulatory protein 83 39 Op 4 . + CDS 70947 - 71099 95 ## SeSA_A0612 hypothetical protein 84 39 Op 5 . + CDS 71175 - 71345 122 ## ECS88_2547 hypothetical protein 85 39 Op 6 . + CDS 71356 - 71961 399 ## ECS88_2548 DNA single-strand annealing protein; essential recombination function protein Erf 86 39 Op 7 . + CDS 71961 - 72344 273 ## EC55989_2646 hypothetical protein 87 39 Op 8 . + CDS 72368 - 72664 155 ## EFER_2084 anti-RecBCD protein 2 88 40 Op 1 . + CDS 72768 - 73277 361 ## UTI89_C2689 hypothetical protein 89 40 Op 2 . + CDS 73274 - 73573 95 ## ECS88_2552 hypothetical protein 90 40 Op 3 . + CDS 73575 - 74147 404 ## ECS88_2553 hypothetical protein 91 40 Op 4 . + CDS 74147 - 74431 241 ## ECB_00728 hypothetical protein 92 40 Op 5 . + CDS 74424 - 74708 275 ## ECS88_2555 hypothetical protein + Term 74712 - 74741 1.2 93 41 Op 1 . + CDS 74781 - 74948 125 ## ECS88_2556 hypothetical protein 94 41 Op 2 . + CDS 75006 - 75206 204 ## JW5387 response regulator inhibitor for tor operon + Term 75359 - 75405 4.1 - Term 75332 - 75375 -0.3 95 42 Tu 1 . - CDS 75394 - 76329 356 ## COG0583 Transcriptional regulator - Prom 76366 - 76425 6.4 + Prom 76322 - 76381 5.1 96 43 Op 1 4/0.481 + CDS 76547 - 77884 1398 ## COG2610 H+/gluconate symporter and related permeases 97 43 Op 2 . + CDS 77902 - 79230 1189 ## COG3048 D-serine dehydratase + Term 79444 - 79479 -0.9 98 44 Op 1 19/0.000 - CDS 79338 - 80876 416 ## COG0477 Permeases of the major facilitator superfamily 99 44 Op 2 . - CDS 80876 - 81916 769 ## COG1566 Multidrug resistance efflux pump - Prom 81963 - 82022 3.5 + Prom 82282 - 82341 7.9 100 45 Tu 1 . + CDS 82455 - 83069 329 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 83279 - 83320 3.0 101 46 Tu 1 . + CDS 83728 - 86667 1181 ## COG0642 Signal transduction histidine kinase + Term 86674 - 86712 4.4 - Term 86660 - 86700 4.8 102 47 Op 1 2/0.808 - CDS 86723 - 87868 405 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase - Term 87877 - 87913 2.2 103 47 Op 2 3/0.635 - CDS 87942 - 88886 548 ## COG0679 Predicted permeases 104 47 Op 3 4/0.481 - CDS 88956 - 90650 1061 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Term 90668 - 90696 0.5 105 47 Op 4 . - CDS 90704 - 91954 1029 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase - Prom 91980 - 92039 8.0 - Term 92363 - 92411 10.3 106 48 Tu 1 . - CDS 92466 - 93101 608 ## ECS88_2570 hypothetical protein + Prom 93261 - 93320 5.3 107 49 Tu 1 . + CDS 93397 - 93672 60 ## APECO1_4160 putative lipoprotein involved in colanic acid biosynthesis - Term 93609 - 93647 -0.6 108 50 Tu 1 . - CDS 93749 - 93991 268 ## ECS88_2572 hypothetical protein - Prom 94033 - 94092 4.3 109 51 Tu 1 . + CDS 94344 - 95264 900 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 95298 - 95338 4.1 - Term 95702 - 95733 4.1 110 52 Tu 1 . - CDS 95756 - 96994 1392 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 97202 - 97261 4.7 + Prom 97150 - 97209 7.1 111 53 Op 1 9/0.019 + CDS 97389 - 99068 1414 ## COG3275 Putative regulator of cell autolysis 112 53 Op 2 3/0.635 + CDS 99083 - 99820 745 ## COG3279 Response regulator of the LytR/AlgR family 113 53 Op 3 . + CDS 99833 - 100645 474 ## COG2207 AraC-type DNA-binding domain-containing proteins 114 54 Op 1 3/0.635 - CDS 100722 - 103217 2634 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 115 54 Op 2 3/0.635 - CDS 103242 - 104279 875 ## COG1363 Cellulase M and related proteins 116 54 Op 3 3/0.635 - CDS 104279 - 105364 1095 ## COG0006 Xaa-Pro aminopeptidase 117 54 Op 4 7/0.058 - CDS 105380 - 106627 1583 ## COG1299 Phosphotransferase system, fructose-specific IIC component 118 54 Op 5 3/0.635 - CDS 106649 - 106975 557 ## COG1445 Phosphotransferase system fructose-specific component IIB - Prom 107121 - 107180 5.5 - Term 107145 - 107180 5.1 119 55 Tu 1 . - CDS 107194 - 108159 1108 ## COG0837 Glucokinase - Prom 108194 - 108253 2.5 + Prom 108129 - 108188 5.0 120 56 Tu 1 . + CDS 108363 - 109619 994 ## COG0038 Chloride channel protein EriC + Prom 109635 - 109694 2.6 121 57 Tu 1 . + CDS 109734 - 110060 330 ## ECS88_2585 hypothetical protein - Term 110143 - 110195 0.3 122 58 Tu 1 . - CDS 110201 - 111376 1513 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Prom 111642 - 111701 4.0 123 59 Tu 1 . + CDS 111775 - 112977 1538 ## COG1972 Nucleoside permease + Term 113009 - 113043 5.4 124 60 Tu 1 . - CDS 113049 - 115238 1437 ## COG2200 FOG: EAL domain - Prom 115376 - 115435 4.2 - TRNA 115445 - 115520 86.5 # Ala GGC 0 0 - TRNA 115560 - 115635 86.5 # Ala GGC 0 0 + Prom 115765 - 115824 5.6 125 61 Op 1 . + CDS 115856 - 116215 342 ## SDY_2596 hypothetical protein 126 61 Op 2 . + CDS 116238 - 116609 210 ## ECS88_2591 nucleic acid-binding transcriptional regulator + Term 116618 - 116652 5.0 - Term 116601 - 116646 4.2 127 62 Tu 1 . - CDS 116660 - 118075 1652 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 118134 - 118193 4.3 + TRNA 118334 - 118409 94.3 # Val TAC 0 0 + TRNA 118456 - 118531 94.3 # Val TAC 0 0 + TRNA 118536 - 118610 90.0 # Undet ??? 0 0 - Term 118609 - 118635 0.1 128 63 Op 1 . - CDS 118721 - 119605 489 ## COG0583 Transcriptional regulator 129 63 Op 2 . - CDS 119646 - 119804 103 ## EcSMS35_2559 hypothetical protein - Term 119813 - 119848 2.0 130 64 Op 1 1/0.923 - CDS 119857 - 121113 952 ## COG0477 Permeases of the major facilitator superfamily 131 64 Op 2 . - CDS 121174 - 122007 863 ## COG0005 Purine nucleoside phosphorylase - Prom 122220 - 122279 4.6 + Prom 122074 - 122133 7.0 132 65 Tu 1 . + CDS 122256 - 123020 689 ## ECS88_2597 hypothetical protein + Term 123022 - 123068 -0.1 133 66 Tu 1 . - CDS 123059 - 123985 590 ## COG0583 Transcriptional regulator - Prom 124011 - 124070 3.7 + Prom 123950 - 124009 5.3 134 67 Tu 1 . + CDS 124075 - 125073 715 ## COG0385 Predicted Na+-dependent transporter + Term 125084 - 125129 3.1 - Term 125023 - 125065 -0.5 135 68 Op 1 3/0.635 - CDS 125070 - 125288 276 ## COG3530 Uncharacterized protein conserved in bacteria 136 68 Op 2 7/0.058 - CDS 125290 - 127305 2148 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) - Term 127316 - 127344 1.3 137 68 Op 3 . - CDS 127376 - 128371 736 ## COG3115 Cell division protein - Prom 128547 - 128606 2.7 + Prom 128506 - 128565 3.3 138 69 Tu 1 8/0.038 + CDS 128730 - 129365 573 ## COG2981 Uncharacterized protein involved in cysteine biosynthesis + Term 129405 - 129437 4.1 + Prom 129458 - 129517 3.5 139 70 Tu 1 6/0.115 + CDS 129550 - 130521 702 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Term 130550 - 130577 0.1 + Prom 130682 - 130741 5.8 140 71 Op 1 25/0.000 + CDS 130905 - 131162 353 ## COG1925 Phosphotransferase system, HPr-related proteins 141 71 Op 2 10/0.019 + CDS 131207 - 132934 1861 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 142 71 Op 3 . + CDS 132975 - 133484 665 ## COG2190 Phosphotransferase system IIA components - Term 133491 - 133521 3.0 143 72 Tu 1 . - CDS 133546 - 134397 866 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase - Prom 134468 - 134527 3.9 + Prom 134352 - 134411 2.5 144 73 Tu 1 . + CDS 134502 - 134870 338 ## ECS88_2609 hypothetical protein 145 74 Tu 1 . - CDS 134873 - 135787 564 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 135837 - 135896 4.9 146 75 Op 1 17/0.000 - CDS 135919 - 137016 1291 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component 147 75 Op 2 17/0.000 - CDS 137006 - 137881 1150 ## COG4208 ABC-type sulfate transport system, permease component 148 75 Op 3 7/0.058 - CDS 137881 - 138714 1067 ## COG0555 ABC-type sulfate transport system, permease component 149 75 Op 4 1/0.923 - CDS 138714 - 139730 1317 ## COG4150 ABC-type sulfate transport system, periplasmic component - Prom 139752 - 139811 4.8 - Term 139839 - 139875 5.1 150 76 Tu 1 . - CDS 139888 - 140679 248 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 140728 - 140787 3.9 + Prom 140813 - 140872 3.5 151 77 Op 1 9/0.019 + CDS 140959 - 141855 894 ## COG2103 Predicted sugar phosphate isomerase 152 77 Op 2 . + CDS 141859 - 143283 1419 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 143410 - 143449 7.4 - Term 143398 - 143437 3.6 153 78 Op 1 . - CDS 143461 - 144360 1193 ## COG2837 Predicted iron-dependent peroxidase - Term 144369 - 144400 2.1 154 78 Op 2 . - CDS 144456 - 145031 431 ## EcSMS35_2587 hypothetical protein 155 78 Op 3 . - CDS 145092 - 145541 319 ## UTI89_C2766 hypothetical protein 156 78 Op 4 . - CDS 145528 - 145953 536 ## COG0456 Acetyltransferases - Prom 145981 - 146040 4.3 + Prom 145999 - 146058 4.2 157 79 Op 1 4/0.481 + CDS 146167 - 147036 784 ## COG0860 N-acetylmuramoyl-L-alanine amidase 158 79 Op 2 . + CDS 147040 - 147939 756 ## COG0408 Coproporphyrinogen III oxidase + Term 148049 - 148087 1.0 159 80 Op 1 2/0.808 - CDS 147945 - 148997 971 ## COG2207 AraC-type DNA-binding domain-containing proteins 160 80 Op 2 4/0.481 - CDS 149043 - 149543 421 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 161 80 Op 3 6/0.115 - CDS 149556 - 150215 713 ## COG4816 Ethanolamine utilization protein 162 80 Op 4 8/0.038 - CDS 150225 - 151112 1089 ## COG4302 Ethanolamine ammonia-lyase, small subunit 163 80 Op 5 5/0.250 - CDS 151133 - 152494 1562 ## COG4303 Ethanolamine ammonia-lyase, large subunit 164 80 Op 6 4/0.481 - CDS 152506 - 153909 1311 ## COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition 165 80 Op 7 2/0.808 - CDS 153906 - 155132 1627 ## COG3192 Ethanolamine utilization protein 166 81 Op 1 2/0.808 - CDS 155349 - 156536 1147 ## COG1454 Alcohol dehydrogenase, class IV 167 81 Op 2 4/0.481 - CDS 156526 - 157362 884 ## COG4820 Ethanolamine utilization protein, possible chaperonin 168 81 Op 3 4/0.481 - CDS 157373 - 158776 838 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 169 81 Op 4 4/0.481 - CDS 158788 - 159075 239 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein - Term 159137 - 159174 5.6 170 82 Op 1 1/0.923 - CDS 159182 - 159475 441 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 171 82 Op 2 4/0.481 - CDS 159514 - 160530 904 ## COG0280 Phosphotransacetylase 172 82 Op 3 4/0.481 - CDS 160527 - 161330 833 ## COG4812 Ethanolamine utilization cobalamin adenosyltransferase 173 82 Op 4 4/0.481 - CDS 161327 - 162028 729 ## COG4766 Ethanolamine utilization protein 174 82 Op 5 4/0.481 - CDS 162003 - 162482 369 ## COG4917 Ethanolamine utilization protein 175 82 Op 6 1/0.923 - CDS 162495 - 162830 403 ## COG4810 Ethanolamine utilization protein - Prom 163053 - 163112 18.8 176 83 Tu 1 . - CDS 163149 - 165428 2685 ## COG0281 Malic enzyme - Prom 165549 - 165608 3.5 + Prom 165511 - 165570 3.3 177 84 Op 1 13/0.000 + CDS 165717 - 166667 865 ## COG0176 Transaldolase 178 84 Op 2 . + CDS 166687 - 168690 2433 ## COG0021 Transketolase 179 85 Tu 1 . - CDS 168767 - 169765 596 ## ECS88_2645 hypothetical protein 180 86 Op 1 3/0.635 - CDS 169936 - 170511 631 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 181 86 Op 2 . - CDS 170579 - 172558 1444 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Prom 172627 - 172686 2.8 182 87 Tu 1 . + CDS 172764 - 174464 1342 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific + Prom 174469 - 174528 4.2 183 88 Tu 1 . + CDS 174628 - 177741 3267 ## COG0841 Cation/multidrug efflux pump + Term 177753 - 177787 3.1 + Prom 177816 - 177875 2.1 184 89 Tu 1 . + CDS 177919 - 178041 98 ## ECP_2483 hypothetical protein + Term 178121 - 178166 2.3 + Prom 178149 - 178208 5.3 185 90 Op 1 9/0.019 + CDS 178280 - 178636 303 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 186 90 Op 2 . + CDS 178640 - 179767 1084 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 187 90 Op 3 . + CDS 179795 - 179995 324 ## G2583_2995 hypothetical protein 188 91 Op 1 . - CDS 180076 - 180774 805 ## COG0400 Predicted esterase 189 91 Op 2 4/0.481 - CDS 180848 - 182824 1349 ## COG1444 Predicted P-loop ATPase fused to an acetyltransferase 190 91 Op 3 5/0.250 - CDS 182878 - 183741 823 ## COG2321 Predicted metalloprotease - Prom 183885 - 183944 65.3 191 92 Tu 1 . - CDS 183951 - 184664 1146 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Prom 184649 - 184708 3.6 192 93 Tu 1 . + CDS 184736 - 184966 90 ## SDY_2665 hypothetical protein + Term 185053 - 185080 0.5 - Term 184838 - 184869 3.2 193 94 Op 1 9/0.019 - CDS 184877 - 185911 908 ## COG3317 Uncharacterized lipoprotein 194 94 Op 2 . - CDS 185928 - 186806 855 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 186830 - 186889 2.2 + Prom 186860 - 186919 5.9 195 95 Op 1 4/0.481 + CDS 186952 - 187524 346 ## COG2716 Glycine cleavage system regulatory protein 196 95 Op 2 . + CDS 187524 - 187994 576 ## COG1225 Peroxiredoxin - Term 187856 - 187887 -0.2 197 96 Tu 1 . - CDS 188093 - 189154 1350 ## COG0628 Predicted permease - Prom 189224 - 189283 4.5 + Prom 189239 - 189298 3.1 198 97 Op 1 6/0.115 + CDS 189367 - 190830 1737 ## COG4783 Putative Zn-dependent protease, contains TPR repeats 199 97 Op 2 . + CDS 190851 - 191210 484 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 200 98 Op 1 6/0.115 - CDS 191348 - 192025 620 ## COG0593 ATPase involved in DNA replication initiation - Prom 192055 - 192114 65.0 201 98 Op 2 5/0.250 - CDS 192116 - 193405 1018 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 193467 - 193526 15.6 - Term 193477 - 193509 3.1 202 99 Tu 1 . - CDS 193528 - 194154 878 ## COG0035 Uracil phosphoribosyltransferase - Prom 194189 - 194248 6.3 + Prom 194375 - 194434 7.0 203 100 Op 1 21/0.000 + CDS 194478 - 195515 1237 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase 204 100 Op 2 4/0.481 + CDS 195515 - 196153 649 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN + Term 196171 - 196202 2.4 + Prom 196230 - 196289 2.8 205 101 Op 1 11/0.019 + CDS 196325 - 198391 2123 ## COG0855 Polyphosphate kinase 206 101 Op 2 . + CDS 198396 - 199937 1426 ## COG0248 Exopolyphosphatase + Term 199943 - 199983 10.3 - Term 199723 - 199770 2.1 207 102 Tu 1 . - CDS 199976 - 202219 1446 ## COG2200 FOG: EAL domain - Prom 202356 - 202415 6.5 - Term 202345 - 202395 1.5 208 103 Tu 1 . - CDS 202436 - 202726 91 ## ECS88_2676 hypothetical protein - Prom 202941 - 203000 7.9 + Prom 202410 - 202469 7.7 209 104 Tu 1 . + CDS 202571 - 202762 102 ## EcSMS35_2653 hypothetical protein + Term 202816 - 202857 3.1 + Prom 202897 - 202956 7.1 210 105 Op 1 . + CDS 203076 - 203591 361 ## ECS88_2677 outer membrane lipoprotein 211 105 Op 2 . + CDS 203607 - 204146 560 ## ECUMN_2820 hypothetical protein + Term 204181 - 204232 4.5 - Term 204180 - 204211 3.4 212 106 Op 1 13/0.000 - CDS 204240 - 205817 1954 ## COG0519 GMP synthase, PP-ATPase domain/subunit - Term 205844 - 205879 6.1 213 106 Op 2 . - CDS 205886 - 207352 1723 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 207389 - 207448 6.7 + Prom 207420 - 207479 5.0 214 107 Tu 1 . + CDS 207514 - 208890 1020 ## COG1570 Exonuclease VII, large subunit 215 108 Tu 1 . - CDS 208959 - 217106 3647 ## ECS88_2682 outer membrane protein; RatA precursor homolog - Prom 217142 - 217201 3.3 - Term 217180 - 217215 6.7 216 109 Tu 1 . - CDS 217227 - 218009 580 ## APECO1_4015 SinI-like protein - Prom 218144 - 218203 2.5 217 110 Tu 1 . - CDS 218318 - 220522 2088 ## UTI89_C2830 SinH-like protein - Prom 220614 - 220673 7.8 - Term 220660 - 220718 10.0 218 111 Op 1 . - CDS 220731 - 220946 191 ## ECS88_2686 hypothetical protein 219 111 Op 2 7/0.058 - CDS 221009 - 222481 2059 ## COG1160 Predicted GTPases - Prom 222501 - 222560 1.8 - Term 222537 - 222578 10.4 220 112 Op 1 9/0.019 - CDS 222599 - 223777 1144 ## COG1520 FOG: WD40-like repeat 221 112 Op 2 12/0.000 - CDS 223788 - 224408 696 ## COG2976 Uncharacterized protein conserved in bacteria 222 112 Op 3 11/0.019 - CDS 224426 - 225700 1523 ## COG0124 Histidyl-tRNA synthetase - Term 225770 - 225801 4.5 223 113 Op 1 10/0.019 - CDS 225811 - 226929 1281 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 224 113 Op 2 5/0.250 - CDS 226956 - 227963 732 ## COG1426 Uncharacterized protein conserved in bacteria - Prom 228052 - 228111 6.0 - Term 228196 - 228241 10.3 225 114 Op 1 . - CDS 228248 - 229402 1458 ## COG0820 Predicted Fe-S-cluster redox enzyme - Prom 229489 - 229548 2.5 226 114 Op 2 . - CDS 229552 - 229983 524 ## COG0105 Nucleoside diphosphate kinase - Prom 230033 - 230092 3.7 227 115 Op 1 7/0.058 - CDS 230132 - 232408 1373 ## COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC 228 115 Op 2 . - CDS 232453 - 237414 4550 ## COG2373 Large extracellular alpha-helical protein - Prom 237452 - 237511 4.2 + Prom 237405 - 237464 2.7 229 116 Tu 1 . + CDS 237621 - 238466 762 ## COG2897 Rhodanese-related sulfurtransferase + Term 238489 - 238516 -0.1 - Term 238890 - 238916 1.0 230 117 Tu 1 . - CDS 238997 - 239773 759 ## APECO1_4002 enhanced serine sensitivity protein SseB - Prom 239821 - 239880 6.7 231 118 Tu 1 2/0.808 - CDS 239915 - 241198 1453 ## COG0260 Leucyl aminopeptidase - Term 241218 - 241251 5.2 232 119 Op 1 9/0.019 - CDS 241257 - 241457 328 ## COG2975 Uncharacterized protein conserved in bacteria 233 119 Op 2 13/0.000 - CDS 241469 - 241804 410 ## COG0633 Ferredoxin 234 119 Op 3 11/0.019 - CDS 241806 - 243656 2299 ## COG0443 Molecular chaperone 235 119 Op 4 10/0.019 - CDS 243673 - 244188 599 ## COG1076 DnaJ-domain-containing proteins 1 - Term 244229 - 244268 5.0 236 120 Op 1 14/0.000 - CDS 244284 - 244607 444 ## COG0316 Uncharacterized conserved protein 237 120 Op 2 20/0.000 - CDS 244624 - 245010 593 ## COG0822 NifU homolog involved in Fe-S cluster formation 238 120 Op 3 13/0.000 - CDS 245038 - 246252 1692 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 239 120 Op 4 8/0.038 - CDS 246364 - 246852 586 ## COG1959 Predicted transcriptional regulator - Prom 246887 - 246946 4.7 240 121 Tu 1 . - CDS 247122 - 247862 962 ## COG0565 rRNA methylase + Prom 247886 - 247945 3.9 241 122 Tu 1 . + CDS 247981 - 248784 999 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family + Prom 248812 - 248871 4.4 242 123 Tu 1 . + CDS 248948 - 249802 688 ## COG1073 Hydrolases of the alpha/beta superfamily + Prom 249828 - 249887 5.4 243 124 Tu 1 . + CDS 249993 - 251273 877 ## COG3711 Transcriptional antiterminator 244 125 Tu 1 . - CDS 251265 - 252404 984 ## COG0477 Permeases of the major facilitator superfamily - Prom 252508 - 252567 2.4 245 126 Tu 1 . + CDS 252773 - 253195 396 ## COG2259 Predicted membrane protein - Term 253188 - 253248 4.0 246 127 Op 1 2/0.808 - CDS 253355 - 254227 794 ## COG2017 Galactose mutarotase and related enzymes 247 127 Op 2 3/0.635 - CDS 254239 - 255291 901 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 248 127 Op 3 21/0.000 - CDS 255366 - 256364 1123 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 249 127 Op 4 16/0.000 - CDS 256389 - 257900 188 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 250 127 Op 5 . - CDS 257923 - 258906 1071 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 258935 - 258994 9.4 251 128 Tu 1 . - CDS 259003 - 262284 3056 ## UTI89_C2868 hypothetical protein - Prom 262429 - 262488 2.9 + Prom 262318 - 262377 3.6 252 129 Tu 1 . + CDS 262402 - 263595 1128 ## COG1940 Transcriptional regulator/sugar kinase + Term 263615 - 263644 2.1 - Term 263603 - 263632 2.1 253 130 Tu 1 . - CDS 263659 - 264912 1543 ## COG0112 Glycine/serine hydroxymethyltransferase + Prom 265143 - 265202 8.2 254 131 Tu 1 . + CDS 265241 - 266431 1234 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Term 266432 - 266483 1.0 - Term 266374 - 266414 2.0 255 132 Op 1 4/0.481 - CDS 266476 - 266814 465 ## COG0347 Nitrogen regulatory protein PII 256 132 Op 2 . - CDS 266875 - 268209 1256 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 257 132 Op 3 . - CDS 268199 - 268912 459 ## APECO1_3976 hypothetical protein - Prom 268984 - 269043 1.8 258 133 Tu 1 . - CDS 269077 - 270459 987 ## COG0642 Signal transduction histidine kinase - Term 270970 - 271003 2.1 259 134 Tu 1 . - CDS 271080 - 274964 4456 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Prom 275019 - 275078 4.0 260 135 Tu 1 . + CDS 275226 - 276782 1627 ## COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 261 136 Op 1 2/0.808 - CDS 276779 - 277282 479 ## COG0590 Cytosine/adenosine deaminases 262 136 Op 2 . - CDS 277340 - 277975 502 ## COG0560 Phosphoserine phosphatase - Prom 278109 - 278168 4.3 + Prom 278073 - 278132 4.0 263 137 Op 1 1/0.923 + CDS 278184 - 279032 796 ## COG1737 Transcriptional regulators 264 137 Op 2 . + CDS 279088 - 279348 290 ## COG1145 Ferredoxin + Term 279349 - 279383 -0.3 - Term 279481 - 279522 8.5 265 138 Tu 1 . - CDS 279619 - 279771 69 ## EFER_0512 hypothetical protein - Prom 279966 - 280025 3.1 - Term 279963 - 280025 8.1 266 139 Op 1 8/0.038 - CDS 280043 - 280423 322 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 267 139 Op 2 9/0.019 - CDS 280423 - 281154 979 ## COG0854 Pyridoxal phosphate biosynthesis protein 268 139 Op 3 16/0.000 - CDS 281166 - 281894 659 ## COG1381 Recombinational DNA repair protein (RecF pathway) 269 139 Op 4 18/0.000 - CDS 281906 - 282811 1044 ## COG1159 GTPase 270 139 Op 5 13/0.000 - CDS 282808 - 283488 687 ## COG0571 dsRNA-specific ribonuclease - Prom 283644 - 283703 6.1 271 139 Op 6 14/0.000 - CDS 283719 - 284693 1045 ## COG0681 Signal peptidase I 272 139 Op 7 4/0.481 - CDS 284709 - 286508 2090 ## COG0481 Membrane GTPase LepA - Prom 286593 - 286652 5.6 - Term 286651 - 286695 -0.9 273 140 Op 1 8/0.038 - CDS 286706 - 287185 375 ## COG3086 Positive regulator of sigma E activity 274 140 Op 2 10/0.019 - CDS 287182 - 288138 694 ## COG3026 Negative regulator of sigma E activity 275 140 Op 3 11/0.019 - CDS 288138 - 288788 550 ## COG3073 Negative regulator of sigma E activity 276 140 Op 4 . - CDS 288821 - 289396 436 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 277 140 Op 5 . - CDS 289393 - 289548 79 ## ECBD_1107 hypothetical protein - Prom 289614 - 289673 5.0 + Prom 289506 - 289565 5.1 278 141 Tu 1 . + CDS 289804 - 291426 1208 ## COG0029 Aspartate oxidase - Term 291209 - 291246 -0.9 279 142 Tu 1 . - CDS 291411 - 292148 741 ## COG4123 Predicted O-methyltransferase - Prom 292187 - 292246 2.4 + Prom 292089 - 292148 4.2 280 143 Tu 1 . + CDS 292280 - 293614 1490 ## COG0513 Superfamily II DNA and RNA helicases + Term 293618 - 293657 8.2 - Term 293603 - 293643 1.6 281 144 Tu 1 . - CDS 293647 - 294528 453 ## COG0583 Transcriptional regulator - Prom 294572 - 294631 3.5 + Prom 294518 - 294577 3.9 282 145 Tu 1 . + CDS 294631 - 295218 480 ## COG1280 Putative threonine efflux protein + Term 295228 - 295263 7.4 - Term 295216 - 295251 7.4 283 146 Tu 1 . - CDS 295274 - 295657 529 ## COG3445 Acid-induced glycyl radical enzyme - Prom 295841 - 295900 8.1 + Prom 295667 - 295726 5.7 284 147 Tu 1 . + CDS 295962 - 296651 581 ## COG0692 Uracil DNA glycosylase + Term 296666 - 296705 5.1 - Term 296654 - 296691 8.5 285 148 Tu 1 . - CDS 296699 - 297736 1051 ## COG0566 rRNA methylases - Prom 297876 - 297935 3.2 + Prom 297825 - 297884 6.1 286 149 Tu 1 . + CDS 297943 - 298362 178 ## PROTEIN SUPPORTED gi|124485582|ref|YP_001030198.1| ribosomal protein L12E/L44/L45/RPP1/RPP2-like protein + Term 298369 - 298401 5.4 287 150 Op 1 3/0.635 + CDS 298605 - 299129 332 ## COG3148 Uncharacterized conserved protein 288 150 Op 2 3/0.635 + CDS 299161 - 301821 2237 ## COG1042 Acyl-CoA synthetase (NDP forming) 289 151 Op 1 3/0.635 + CDS 301935 - 303290 1298 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Term 303292 - 303329 3.7 290 151 Op 2 . + CDS 303336 - 303659 321 ## COG5544 Predicted periplasmic lipoprotein 291 152 Tu 1 . - CDS 303656 - 304954 1059 ## COG0477 Permeases of the major facilitator superfamily - Prom 305059 - 305118 4.3 292 153 Op 1 . - CDS 305297 - 305515 144 ## EcHS_A4118 IS621, transposase 293 153 Op 2 5/0.250 - CDS 305611 - 305943 238 ## COG3547 Transposase and inactivated derivatives 294 153 Op 3 2/0.808 - CDS 305859 - 306263 270 ## COG3547 Transposase and inactivated derivatives - Prom 306440 - 306499 4.5 295 154 Tu 1 . - CDS 306507 - 307109 338 ## COG2801 Transposase and inactivated derivatives 296 155 Tu 1 . - CDS 307334 - 307507 232 ## E2348C_4254 transposase Orf1 of IS1397 297 156 Tu 1 . - CDS 307612 - 307854 73 ## ECP_0414 transposase and inactivated derivatives [DNA replication, recombination, and repair]; region: COG2963 Predicted protein(s) >gi|296918691|gb|GG773009.1| GENE 1 80 - 742 618 220 aa, chain - ## HITS:1 COG:ZdedD KEGG:ns NR:ns ## COG: ZdedD COG3147 # Protein_GI_number: 15802861 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 220 1 220 220 298 100.0 7e-81 MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAAT QALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVVPPKPKPVEPPKPKVE APPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQ GKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN >gi|296918691|gb|GG773009.1| GENE 2 732 - 2000 1291 422 aa, chain - ## HITS:1 COG:folC KEGG:ns NR:ns ## COG: folC COG0285 # Protein_GI_number: 16130250 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Escherichia coli K12 # 1 422 1 422 422 812 99.0 0 MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGVLKPAPFVFTVAGTNGK GTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPESAHTASFAEIESARGDIS LTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVDADVAVVTSIALDHTDWLGPD RESIGREKAGIFRSEKPAIVGEPEMPSTIADVAQEKGALLQRRGVEWNYSVTDHDWTFSD AHGTLENLPLPLVPQPNAATALAALRASGLEVSENAIRDGIASAILPGRFQIVSESPRVI FDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLHDKDIAGTLAWLKSVVDDWYCAPLEGP RGATAEQLLEHLGNGKSFDSVAQAWDAAMADAKAEDTVLVCGSFHTVAHVMEVIDARRSG GK >gi|296918691|gb|GG773009.1| GENE 3 2070 - 2984 1048 304 aa, chain - ## HITS:1 COG:ECs3200 KEGG:ns NR:ns ## COG: ECs3200 COG0777 # Protein_GI_number: 15832454 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Escherichia coli O157:H7 # 1 304 1 304 304 584 100.0 1e-167 MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNR LHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPV VAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKT SAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREK LPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPNPEAPREGVVVPPVPDQ EPEA >gi|296918691|gb|GG773009.1| GENE 4 3140 - 3799 591 219 aa, chain - ## HITS:1 COG:STM2367 KEGG:ns NR:ns ## COG: STM2367 COG0586 # Protein_GI_number: 16765694 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 378 94.0 1e-105 MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA LASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQF YEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGT LPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK >gi|296918691|gb|GG773009.1| GENE 5 3882 - 4694 543 270 aa, chain - ## HITS:1 COG:ECs3202 KEGG:ns NR:ns ## COG: ECs3202 COG0101 # Protein_GI_number: 15832456 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Escherichia coli O157:H7 # 1 270 1 270 270 555 99.0 1e-158 MSDQQQPPVYKIALGIEYDGSRYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTD AGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRY IIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMH INVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATA KAEGLYLVAVDYPDRYDLPKPPMGPLFLAD >gi|296918691|gb|GG773009.1| GENE 6 4694 - 5707 1304 337 aa, chain - ## HITS:1 COG:usg KEGG:ns NR:ns ## COG: usg COG0136 # Protein_GI_number: 16130254 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Escherichia coli K12 # 1 337 1 337 337 638 99.0 0 MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAGEQLRFGGKTITVQDAA EFDWTQAQLAFFVAGKEATATWVEEATNSGCLVIDSSGLFALEPDVPLVVPEVNPFVLTD YRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLISASAQGKKAVDALAGQSAKLL NGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVDEVRKILQDEGLMISASVVQAPV FYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEENEFPTQVGDASGSPHLSVGCVRND YGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQEYLY >gi|296918691|gb|GG773009.1| GENE 7 5773 - 6909 1135 378 aa, chain - ## HITS:1 COG:pdxB KEGG:ns NR:ns ## COG: pdxB COG0111 # Protein_GI_number: 16130255 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli K12 # 1 378 1 378 378 732 98.0 0 MKILVDENMPYARDLFSRLGEVTAVPGRPIPVAQLADADALMVRSVTKVNESLLAGKPIK FVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAERDGFSLHERTVG IVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQHADILTFHTPLFKD GPYKTLHLADEKLIRSLKPGAIRINACRGAVVDNTALLTCLSEGQKLSVVLDVWEGEPEL NVELLKKVDIGTPHIAGYTLEGKARGTTQVFEAYSKFIGHEQHVALDTLLPAPEFGRITL HGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPGEFDKLRKNYLERREWSSLYVICDDAS AASLLCKLGFNAVHHPAR >gi|296918691|gb|GG773009.1| GENE 8 7008 - 8003 819 331 aa, chain + ## HITS:1 COG:no KEGG:ECP_2360 NR:ns ## KEGG: ECP_2360 # Name: flk # Def: flagella biosynthesis regulator; Provisional; region: flk; PRK10715 # Organism: E.coli_536 # Pathway: not_defined # 1 331 1 331 331 516 99.0 1e-145 MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKVTSLTQQQRAELWAGIR HDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQLGEYLRLGNNRQAVTDYI RHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREATDRPLLPAEHNALKQLVTKLA AATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWLQARQTLSQQNTPTLESLQMALK QPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDILNQLYQRRVKGIEPRDMQPLLNPFP PMMDTLQNMATRPALWILLVAIILILVWLVR >gi|296918691|gb|GG773009.1| GENE 9 8000 - 9178 1011 392 aa, chain - ## HITS:1 COG:ECs3206 KEGG:ns NR:ns ## COG: ECs3206 COG0477 # Protein_GI_number: 15832460 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 392 1 392 392 585 98.0 1e-167 MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQ FLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAAILPVPAPFKFALLVVGRL ILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGALAVGAPLGLLIHSHYGFAAL ALTTMALPLLAWACNGTVRKVPALAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVS LYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAP GAWVALAGAALTGAGCSLIFPALGVEVVKRVPSHVRGTALGGYAAFQDIALGVSGPLAGM LATTFGYSSVFLAGAISAVLGIIVTILSFRRG >gi|296918691|gb|GG773009.1| GENE 10 9443 - 10663 1369 406 aa, chain - ## HITS:1 COG:fabB KEGG:ns NR:ns ## COG: fabB COG0304 # Protein_GI_number: 16130258 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli K12 # 1 406 1 406 406 770 100.0 0 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLI DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAM RGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLG KQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVV EELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVDTPIDYLNSHGT STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN IEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLKD >gi|296918691|gb|GG773009.1| GENE 11 10822 - 12828 1428 668 aa, chain + ## HITS:1 COG:yfcK_2 KEGG:ns NR:ns ## COG: yfcK_2 COG0665 # Protein_GI_number: 16130259 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 256 668 1 413 413 799 95.0 0 MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNHLEARFPEHPHPLF VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPEL APWAEQLQAQWPLPLPGCHRLLLDEGRITLDLWFGDINELTSQLDDSLNQKVDAWFLDGF APAKNPDMWTQNLFNAMARLARPGSTLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREML CGVMEQTLPLPCSTPWFNRTGSNKQEAAIIGGGIASALLSLALLRRGWQVTLYCADEAPA LGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDLLPVKFDHDWCGVTQLGWDEKS QHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLKLAQ QQGLQIHYQYQLQDLSRKDDGWLLNFAGDQQATHSVVVLANGHQISRFSQTSSLPVYSVA GQVSHIPTTPELAELKQVLCYDGYLTPQNTANQHHCIGASYHRGSEETAYSDEDQQQNRQ RLIDCFPHAQWAKEVDVSGKEARCGVRCATRDHLPMVGNVPDYDATLVEYASLAEKKDEA VSAPVYDDLFMFAALGSRGLCSAPLCAEILAAQMSEEPIPMDASTLAALNPNRLWVRKLL KGKAVKAG >gi|296918691|gb|GG773009.1| GENE 12 12949 - 13227 363 92 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2473 NR:ns ## KEGG: ECS88_2473 # Name: yfcL # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 92 1 92 92 152 100.0 5e-36 MIAEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQS LEKAIGAGELSPRDQALVTDMWEHLFQQASQQ >gi|296918691|gb|GG773009.1| GENE 13 13261 - 13809 537 182 aa, chain - ## HITS:1 COG:yfcM KEGG:ns NR:ns ## COG: yfcM COG3101 # Protein_GI_number: 16130261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 182 1 182 182 374 98.0 1e-104 MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPADAEVPYNRIVFAHGFYASAIHE ISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQALDWLFCVAAGYPFNVSC DNLEGDFEPDRVVFQRRVHAQVMDYLANGIPERPARFIKALQNYYHTPELTAEQFPWPEA LS >gi|296918691|gb|GG773009.1| GENE 14 13809 - 14618 893 269 aa, chain - ## HITS:1 COG:ECs3211 KEGG:ns NR:ns ## COG: ECs3211 COG0730 # Protein_GI_number: 15832465 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 449 99.0 1e-126 METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQ ACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICI GLYFLLMPKLGEEDRQRRMYGLPFALVAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLA KATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP MIVIVSAVMSAKLLYDSHGQEILHWLGMN >gi|296918691|gb|GG773009.1| GENE 15 14618 - 15442 550 274 aa, chain - ## HITS:1 COG:mepA KEGG:ns NR:ns ## COG: mepA COG3770 # Protein_GI_number: 16130263 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein endopeptidase # Organism: Escherichia coli K12 # 1 274 1 274 274 511 98.0 1e-145 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV MRTDQRRYFGHPDLVMFIQRLSRQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVPALWKPEIFSLIKLAAQDKDVTRIFVNP AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPPGDGCGAELQ SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI >gi|296918691|gb|GG773009.1| GENE 16 15446 - 16531 1114 361 aa, chain - ## HITS:1 COG:ECs3213 KEGG:ns NR:ns ## COG: ECs3213 COG0082 # Protein_GI_number: 15832467 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Escherichia coli O157:H7 # 1 361 1 361 361 696 99.0 0 MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRR EPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDY RGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLEIKDWSQVEQNPFFC PDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQKIIAHMALKPTSSITV PGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPR W >gi|296918691|gb|GG773009.1| GENE 17 16566 - 17498 1630 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|89109150|ref|AP_002930.1| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. W3110] # 1 310 1 310 310 632 99 1e-180 MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDEAVQLVLPSLYLPLDIP EDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGEL INNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHG LIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKL TRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDVPFTWLEFDNGGDGVFMLTKEQLIA AREHFAIYKD >gi|296918691|gb|GG773009.1| GENE 18 17664 - 18215 448 183 aa, chain + ## HITS:1 COG:yfcN KEGG:ns NR:ns ## COG: yfcN COG2840 # Protein_GI_number: 16130266 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 183 1 183 183 349 100.0 2e-96 MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSD EFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACR REHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPP ELP >gi|296918691|gb|GG773009.1| GENE 19 18412 - 19335 304 307 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2480 NR:ns ## KEGG: ECS88_2480 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 274 6 279 285 557 100.0 1e-157 MKILRFWACLLVLIFSSTGGLAAKKIATLVTPIGFSAVTTQIHYYLEILTPEGVAYGVYK QHSRMLQTEKLDLVSWSGNTTAPELTVDDGYEVAKSNCVGLEAYDALSSRTNWICENMVL SVYHDGPVQGCPWLVSTYTDSVLPYDVPTPYVGPKVHNSSCPVSVATYDISWSEDYVAHS KVLSLQSTGGTIEKTLPTFLMESGKLCDGRVMDDRGAYCRFVAQMITFSTSGCDSSKVTV TPNQHPITDKQLHDMVVRVDTSSRQPIDSTCRFQGGGGVVRYVMRSSSFLEYSPPQERKV PDNRRRG >gi|296918691|gb|GG773009.1| GENE 20 19337 - 19864 449 175 aa, chain - ## HITS:1 COG:yfcP KEGG:ns NR:ns ## COG: yfcP COG3539 # Protein_GI_number: 16130268 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 24 175 28 179 179 239 79.0 1e-63 MNLKRISLCAAVLATVLLTPHVQAADNLHFYGNLLSKSCTLVVQGETLAEVHFPTISRKD LMVTGQSARVPVVFQLKDCKGPAQYEVRVTLTGTEDSEQPGFLALDASSAAQGVGIGMEK TDGTPVPINNTSGATFVLSNGNNNLNFNAWLQAKSGREVTMGEFTAFLTATFEYI >gi|296918691|gb|GG773009.1| GENE 21 19861 - 20340 368 159 aa, chain - ## HITS:1 COG:yfcQ KEGG:ns NR:ns ## COG: yfcQ COG3539 # Protein_GI_number: 16130269 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 159 1 162 162 193 61.0 1e-49 MKRLAWCLLYGFAGLAQAAINDVTFHGTLVSPPACTISDGKTIEVEFRNVIIDNINGDNF RQDVPYTITCDPDVRDDAWEMSLTWTGSQTPYDDSAIETDVSGLGIELQQNGQPFKLGTP LKIDPSTPPTLQAVPVKANDAALSDGTFSAYATLQVDYQ >gi|296918691|gb|GG773009.1| GENE 22 20337 - 20840 402 167 aa, chain - ## HITS:1 COG:yfcR KEGG:ns NR:ns ## COG: yfcR COG3539 # Protein_GI_number: 16130270 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 167 6 170 170 206 63.0 2e-53 MKAFFLTGSAALLLACGVTVFPAMAGGKIVNLTLRVLVDGPPPCSVKGSAVEFGNVIIKS IDGANYRQPVGYTLNCSNSVSDDLQMQLQATTTTINGETVLSTGISGFGIRIQNAADHSL VAVGNSSWLPFNINTQPDFEAVPVKQSGVELMASEFNATMTMVVDYQ >gi|296918691|gb|GG773009.1| GENE 23 20857 - 21609 666 250 aa, chain - ## HITS:1 COG:ECs3220 KEGG:ns NR:ns ## COG: ECs3220 COG3121 # Protein_GI_number: 15832474 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 # 12 250 12 250 252 357 74.0 1e-98 MSYKLSCPMLVSTALMALLTTASLTAHASVTPDRTRLVFNESDKSISVTLRNNTEKLPYL AQSWLEDEKGNKITSPLAVLPPVQRIDAMMNGQVKIQALPDIHTLPSDRESLFYYNVREI PPKSGKANTLQIALQTRIKLFWRPKALEKIDMRRPWQFKVTLTRSGQDYTVNNPTPYHVI ISDASTQKKGLTAAGFKPLVMPPKTSQPLKAKMASAPVLTYINDYGARMPLIFRCEGNTC KVDEDQSSKG >gi|296918691|gb|GG773009.1| GENE 24 21629 - 24277 2320 882 aa, chain - ## HITS:1 COG:ECs3221 KEGG:ns NR:ns ## COG: ECs3221 COG3188 # Protein_GI_number: 15832475 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 880 1 878 879 1418 78.0 0 MPNHSNFRLRGIACYIALAISGGSVNAWADDSIQFDPRFLELKGDTKIDLGKFSKKGYVD AGKYNLRVFINKQPLSDEYDINWYVSENDPTKNYACLTPELVAALGLKEGIAKSLQWTHN DECLKPGQLDGMEVENDLSQSALLLTVPQAYLEYTSSDWDPPSRWDDGIPGLIADYSLNA QTRHQEQGGEDSHDISGNGTVGANLGAWRFRADWQSDYQHTRSNDDDDDSSNSTTSKNWD WSRYYAWRALPSLKAKLSLGEDYLNSDIFDGFNYIGSSVSTDDQMLPPNLRGYAPDVSGV AHSSAKVTISQMGRVLYETQVPAGPFRIQDIGDSVSGTLHVRVEEQNGQVQEYDVTTASM PFLTRQGQVRYKVMMGRPEDWNHKTEGGFFSGGEASWGGADGWSLYGGALADKHYQSAAM GVGRDLAQFGALAFDVTHSHVNLDHDSAYGKGKLDGNSFRVSYAKDFDELNSRVTFAGYR FSEKNFMTMSEYLDANQSDMARTGNDKEMYTITYNQNFAAAGVSIYLNYSHRTYWDRPEQ TNYNLMFSHYFNMGSIRNMSISVTGYRYEYDDNADKGMYLSMSIPWSDSSTVTYNGSYGS GSDSSQVGYFKRVDDATHYQVNVGTSEQHGSVDGYLSHDGSLAKVDLSANYHEGEYRSAG IALQGGATLTAHGGALHRTQNMGGTRLLIDADGIANVPVESNGAPVYTNMFGKAVVADIN NYYRNQAYIDLNNLPEDAEATQSVVQATLTEGAIGYRKFKVISGQKAMAVLRLRDGSYPP FGAEVKNDEQQQVGIVDDEGNVYLAGVNAGEHMMVFWEGSAQCEIVLPKPLPADLFSGLL LPCEQKGTAAPDSSAPEIKPVIQDQTRQVTPTEAPTSISATQ >gi|296918691|gb|GG773009.1| GENE 25 24151 - 24900 524 249 aa, chain - ## HITS:1 COG:yfcV KEGG:ns NR:ns ## COG: yfcV COG3539 # Protein_GI_number: 16130272 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 188 1 187 187 236 70.0 3e-62 MSKFAKTAIAAAMVMGAVVSSSAFAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIG AAKLTGGGTTTPKDFQIRLQDCVFTTETNMETTFTGTNYAGPANTDNYALFNVDSGVAMN HVSLVIGDTHGKGYKVGEKIVQPIVMDTSTSKGKDKQTLNFKAWLVGETDAPDLGQFETL TTFQITYLCCGVIQHATDLRLFHKRICVCLITQIFGCGESPAILRWQSLVDQSMHGLMIQ FNLTPVSLS >gi|296918691|gb|GG773009.1| GENE 26 25467 - 25937 415 156 aa, chain - ## HITS:1 COG:ECs3223 KEGG:ns NR:ns ## COG: ECs3223 COG2062 # Protein_GI_number: 15832477 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Escherichia coli O157:H7 # 1 156 6 161 161 301 98.0 2e-82 MRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGD CLNLPSSAEVLPELTPCGDVGLVGAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETP PMFTTSAIASVTLDESGKGQFNWQMSPCNLKMAKAI >gi|296918691|gb|GG773009.1| GENE 27 26155 - 28299 1654 714 aa, chain - ## HITS:1 COG:Z3604_2 KEGG:ns NR:ns ## COG: Z3604_2 COG1250 # Protein_GI_number: 15802887 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli O157:H7 EDL933 # 308 714 1 407 407 771 96.0 0 MEMASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSA KPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIPVIAAIHGACLGGGLELA LACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAV KLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKT QGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG SDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLPVRIKDINPRGINHALKYSWDQLEGKV RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG IDTGTKIMPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPA IYPLIGAQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLG GPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERGESFWKTTATDLQ >gi|296918691|gb|GG773009.1| GENE 28 28299 - 29609 1323 436 aa, chain - ## HITS:1 COG:yfcY KEGG:ns NR:ns ## COG: yfcY COG0183 # Protein_GI_number: 16130275 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 436 1 436 436 786 98.0 0 MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARTEIPAEVIE QLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRA GIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYST GLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYKQPLVE DNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGY LRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSE RFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVT ACAAGGLGAAMVLEAE >gi|296918691|gb|GG773009.1| GENE 29 29846 - 30130 408 94 aa, chain - ## HITS:1 COG:yfcZ KEGG:ns NR:ns ## COG: yfcZ COG3691 # Protein_GI_number: 16130276 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 94 9 102 102 161 100.0 2e-40 MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCK ITPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR >gi|296918691|gb|GG773009.1| GENE 30 30502 - 31842 1263 446 aa, chain + ## HITS:1 COG:ECs3227 KEGG:ns NR:ns ## COG: ECs3227 COG2067 # Protein_GI_number: 15832481 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Escherichia coli O157:H7 # 1 446 3 448 448 824 98.0 0 MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSGEGAIADDAGNVSRNPA LITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTAWVPNMHFVAPINDQFGWG ASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYRLNNAWSFGLGFNAVYARAKI ERFAGDLGQLVAGQIRQSPAWLTPQGQALAATANGIDSNTKIAHLNGNQWGFGWNAGILY ELDKNNRYALTYRSEVKIDFKGNYSSDLNPAFNNYGLPIPTATGGATQSGYLTLNLPEMW EVSGYNRVAPQWAIHYSLAYTSWSQFQQLKATSTSGDTLFQKHEGFKDAYRIALGTTYYY DDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAFNKDASVDVGVSYMHGQSV KINEGPYQFESEGKAWLFGTNFNYAF >gi|296918691|gb|GG773009.1| GENE 31 31900 - 32655 836 251 aa, chain - ## HITS:1 COG:ECs3229 KEGG:ns NR:ns ## COG: ECs3229 COG2853 # Protein_GI_number: 15832483 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 513 99.0 1e-145 MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWR DYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGM ANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGGDMADSLYPVLSWLTWPM SVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYFQRHDFIANGGELKPQENPNAQA IQDDLKDIDSE >gi|296918691|gb|GG773009.1| GENE 32 32949 - 33881 1039 310 aa, chain + ## HITS:1 COG:ECs3230 KEGG:ns NR:ns ## COG: ECs3230 COG2116 # Protein_GI_number: 15832484 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 593 99.0 1e-169 MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHIRQDGEKELERDAMALL WSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTA VLPVMQKPTMSNVGLLMRLWGIVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVM KNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILY LVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKAEARQKAERAE NIKKNDKNPA >gi|296918691|gb|GG773009.1| GENE 33 34193 - 35350 370 385 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 48 385 60 405 406 147 28 6e-34 MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTL QEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMF DDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYN PAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRS MLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKK KPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIY NHAQYLDKRREMMQWWADWLDEKVE >gi|296918691|gb|GG773009.1| GENE 34 36058 - 36213 87 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYSYVIIITPKYYGKPSTLNIIFYNKFVIVSIELNFILFAIYKISTYKNIT >gi|296918691|gb|GG773009.1| GENE 35 36436 - 39384 482 982 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2497 NR:ns ## KEGG: ECS88_2497 # Name: not_defined # Def: endo-alpha-sialidase, phage head protein (EC:3.2.1.129) # Organism: E.coli_S88 # Pathway: not_defined # 1 982 1 981 981 1999 98.0 0 MTDSINANVVVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHV PVSQPIIINAAGYPVYNGQIAKFVTVQGHSMAVYDAYGVQQFYFPNVLKYDPDQLRQQLE DPDGANKYPKLQIARWRDSYDVRGWGAIGDGVHDDTSALSELLSVATGGEKIDGRGLTFK VSTLPDVSRFKNARFLFERIPGQPLFYASEDFIQGELFKITDTPWYNAWTQDKTFVYDNV IYAPFMAGDRHGVNNLHVAWVRSGDDGRTWTTPEWLTDLHENYPTVNYHCMSMGVVRNRL FAVIETRTVSGNKLQVAELWDRPMSRSLRAYGGITKAANQQVAYIRITDHGLFAGDFVNF SNSGVTGVTGNMTVTTVIDKNTFTVTTQNTQDVDQNNEGRYWSFGTSFHSSPWRKTSLGT IPSFVDGSTPVTEIHSFATISDNSFAVGYHNGDIGPRELGILYFSDAFGSPGSFVRRRIP AEYEANASEPCVKYYDGILYLTTRGTLSTQPGSSLHRSSDLGTSWNSLRFPNNVHHSNLP FAKVGDELIIFGSERAFGEWEGGEPDNRYAGNYPRTFMTRVNVNEWSLDNVEWVNVTDQI YQGGIVNSAVGVGSVCIKDNWLYYIFGGEDFLNPWSIGDNNRKYPYVHDGHPADLYCFRV KIKQEEFVSRDFVYGATPNRTLPTFMSTSGVRTVPVPVDFTDDVAVQSLTVHAGTSGQVR AEVKLEGNYAIIAKKVPSDDVTAQRLIVSGGETTSSADGAMITLHGSGSSTPRRAVYNAL EHLFENGDVKPYLDNVNALGGPGNRFSTVYLGSNPVVTSDGTLKTEPVSPDEALLDAWGD VRYIAYKWLNAVAIKGEEGARIHHGVIAQQLRDVLISHGLMEEESTTCRYAFLCYDDYPA VYDDVITGQREMPLTDNDGSIIVDEDDNPVMVMEDIIERVEITPAGSRWGVRPDLLFYIE AAWQRREIERIKARLDLIEGKH >gi|296918691|gb|GG773009.1| GENE 36 39519 - 40448 732 309 aa, chain - ## HITS:1 COG:Z1818_2 KEGG:ns NR:ns ## COG: Z1818_2 COG3561 # Protein_GI_number: 15801289 # Func_class: K Transcription # Function: Phage anti-repressor protein # Organism: Escherichia coli O157:H7 EDL933 # 206 309 1 104 104 210 95.0 3e-54 MKSIATAVSTINVPFHGAELYVVNHNGEPYTPMKPIVEGMGMDWASQFTKMKQRFKTSIV KITMQLPSDEQRREIICLALRKLAGWLQTISPNKVRPEIRDKVIQYQEECDDVLYEYWTK GHVVNPRKAKKALPGKITTEQQEAIKQLVMSRGQSLPKEKQAKAMITMWSSLKSHFGCSY KEISDEQFTEALSLAARVPLEGELIGKQEKKANELSAKEANSLVWLWDYANRAQALFREL YPALKQIQSNYSGRCYDYGHEFSYVIGMARDVLINHTRDVDINEPDGPTNLSAWMRLKNK ELPPSVHNY >gi|296918691|gb|GG773009.1| GENE 37 40512 - 40685 78 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315288223|gb|EFU47622.1| ## NR: gi|315288223|gb|EFU47622.1| hypothetical protein HMPREF9539_01780 [Escherichia coli MS 110-3] # 1 57 1 57 57 98 100.0 2e-19 MIRLDAVVKEIAITILRPNFVHGESFGTNEKLRRERVFSGKRTFSEVMLDAAKKSKQ >gi|296918691|gb|GG773009.1| GENE 38 40949 - 41197 131 82 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2500 NR:ns ## KEGG: ECS88_2500 # Name: not_defined # Def: phage regulatory protein # Organism: E.coli_S88 # Pathway: not_defined # 1 82 15 96 96 133 98.0 2e-30 MAKGVSISPTTVRIPESLREALAVRASKNGRSVNSEIVMILQAAIDEDRSPKSVESFAQQ EADKFKEALLETLKTMYGKDEK >gi|296918691|gb|GG773009.1| GENE 39 41488 - 41745 126 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIYPSNNPPVCLIGCQPCSFYGINYAMLKSLVSIQNGRVCYQGCPPNMGSDVDIERLNEA IKIVIEAFPVLSQSGMVGGWGGKAP >gi|296918691|gb|GG773009.1| GENE 40 41786 - 42004 167 72 aa, chain - ## HITS:1 COG:no KEGG:CMS_2450 NR:ns ## KEGG: CMS_2450 # Name: not_defined # Def: hypothetical protein # Organism: C.michiganensis_sepedonicus # Pathway: not_defined # 1 72 67 139 141 62 34.0 4e-09 MSWDEIRKSDKHGLGTEKIARNAIKAPIPKHVTQDVDFIAFRFCSKAPMVGYKIGATFYV LWLDREFKLYKH >gi|296918691|gb|GG773009.1| GENE 41 42214 - 42657 322 147 aa, chain - ## HITS:1 COG:Cgl0313 KEGG:ns NR:ns ## COG: Cgl0313 COG3600 # Protein_GI_number: 19551563 # Func_class: S Function unknown # Function: Uncharacterized phage-associated protein # Organism: Corynebacterium glutamicum # 6 142 8 145 148 98 40.0 4e-21 MLTCFDVADYFLAHCDEESGDIISNLKIQKLTYYAQGFSLVLLGKPLFNEKIEAWMHGPV VPELYRKYRDCGNGALPAPENFDAKKFSEDEIELLDEVYKVYGQFSAWKLRNMTHEEQPW KDAYIEGAVSQEITLDSMKGFFKTLIN >gi|296918691|gb|GG773009.1| GENE 42 43446 - 45113 322 555 aa, chain - ## HITS:1 COG:no KEGG:ECO111_2668 NR:ns ## KEGG: ECO111_2668 # Name: not_defined # Def: putative DNA injection protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 555 54 612 612 796 79.0 0 MQQAGDWLTGGQSAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPV DRPTDPYAQTGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQNAAKNAGVNLAAQGV LSAAAKGIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGA LLGTGSKRAEQYAKRSQLVKKQLEKYGEYSPSVVVDDLYGSLKSRKDSAGSVIEDITTKM GDTPVDTSKSIKVIDNVLTRANRLGKVANKDLIRGLSDLREELAKPDVDFGLLRELRSAL RESIQGDAMVFPNSAKAATDAVERAMGSDLRNNAARYLGAGEAARYVKANSDYSNVFNKV LNKRIANNLNKAKKEFTPELINSVVFSRKPSDIKRIWPALSEDGKNAMRAAYISKIAEKA GDSPTKFLTELNKLKSQSDGQIYNTIFSGRHMKELDALHEVLQQTARSDIANVVTQTGQS QANRIRTIGATATLGATLALESGFGTMMRLYESKATRNALLRLANTKAGTPAYERALNNA ANAIRPLFATEATQQ >gi|296918691|gb|GG773009.1| GENE 43 45272 - 46687 562 471 aa, chain - ## HITS:1 COG:ECs3232 KEGG:ns NR:ns ## COG: ECs3232 COG1835 # Protein_GI_number: 15832486 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Escherichia coli O157:H7 # 1 218 1 217 378 191 50.0 2e-48 MATWQQGINSGGFLAGIGTQNENAPKASDINATLGLIRENNELARSGANNIGLTALRGLA GVADIYNQEQQQKAISAFNKVHADAWASGDPSGLFKFAQENPAFVAQAQQAFSGLNEQQR NDMGDLAMRANVALSQGPEAYSKFITDNKDRLNRVGANADWMIQTGIQNPEQLSHMLTTM SLGALGPEKAFAVQDKMAGREIDRGKLAETIRSNQAGEALQARGQNLSYQSAMTGHNIAA QRLALDQQEFGFKMQQAQEKAQQLISEAPKLSVNMEKGIETAVNNATASSNSANSMSALA QQFRAEKPTTGLFGNAQNMFAKLTGSDTTLRDLRIRQNALVNSQVLKFLPPGPATDKDVE IVRQGAPTDMDNPETVARWLDAMANLERRNAQFNEFKAEWMSANGNPGQSRNGGQILGLD VKKGESLGSAVKRYMSMNTDAAPAQDSTPSGEPRNQVGSYTSKSGIQFTVE >gi|296918691|gb|GG773009.1| GENE 44 46697 - 47386 668 229 aa, chain - ## HITS:1 COG:no KEGG:EC55989_2605 NR:ns ## KEGG: EC55989_2605 # Name: not_defined # Def: DNA transfer protein # Organism: E.coli_55989 # Pathway: not_defined # 1 229 1 230 230 281 98.0 1e-74 MLYAFKLGRKLRGEEPYCPEKGGKGGSDKSAKYAAEAQKYAADLQNQQFNTIMNNLKPFT PLAEKYVGSLENLSSLEGQGQALNQYYNSQQYKDLAGQARYQSLAAAEATGGLGSTSTSN QLATIAPTLGQQWLSGQMNNYQNLANIGLGALQGQANAGQTYANNMSQISQQSAALAAAN ANRPSAMQSAIGGGASGAIAGAGLAKLIGSSTPWGAAIGGGLGLLGSLF >gi|296918691|gb|GG773009.1| GENE 45 47389 - 47844 238 151 aa, chain - ## HITS:1 COG:no KEGG:ECO111_2671 NR:ns ## KEGG: ECO111_2671 # Name: not_defined # Def: putative head assembly protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 151 1 151 151 313 98.0 9e-85 MITFKPTRNIDLIEAVGNHHDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYQEIQP LTFDCHAMYLPEIRGFSKEIGLAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMVGLKRV GTIKKYFKGVDDVTFYSATREELIDFLNHGR >gi|296918691|gb|GG773009.1| GENE 46 47844 - 48545 406 233 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2510 NR:ns ## KEGG: ECS88_2510 # Name: not_defined # Def: packaged DNA stabilization protein from phage # Organism: E.coli_S88 # Pathway: not_defined # 1 233 35 267 267 391 95.0 1e-107 MADSNLNEPVTIQATRLDTSILPRNIFSQSYLLYVINQGADVGAIAGKANQAGQGAYDAQ VKNDEQDVELADHDARITANTKAINLLEVRLTTAEGKIVVLRSDVDYLLDEVIDIQAHLV TVDQRLDDVENDVSGIKSDYVSKTVTESQSLASPLDVKTSYSVDGIQVVGARNTGWTAAT GTPLLGSFNANQSYTVGTTYTQSEVAALATGLQQARQRILAIETALRLHGLID >gi|296918691|gb|GG773009.1| GENE 47 48545 - 49963 555 472 aa, chain - ## HITS:1 COG:no KEGG:EC55989_2608 NR:ns ## KEGG: EC55989_2608 # Name: not_defined # Def: packaged DNA stabilization protein from phage # Organism: E.coli_55989 # Pathway: not_defined # 1 472 1 472 472 959 98.0 0 MPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSR GVEYNMAQNAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGT VKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDPEDESHPDRYSAQYR AESQPDGIIGIGTWRDFIVCFGSSTIEYFSMTGATTVGAALYVAQPSLMVQKGIAGTYCK TPFADSYAFISNPATGAPSVYIIGSGQVSPIASASIEKILRSYTADELADGVMESLRFDA HELLIIHLPRHVLVYDASSSANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESMT GKLQFDISSQYDRQQEHLLFTPLFKADNARVFDLEVESSTGVAQYADRLFLSATTDGINY GREQMIEQNEPFVYDKRVLWKRVGRIRKNVGFKLRVITKSPVTLSGCQIRIE >gi|296918691|gb|GG773009.1| GENE 48 49973 - 50434 142 153 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2512 NR:ns ## KEGG: ECS88_2512 # Name: not_defined # Def: DNA stabilization protein from phage # Organism: E.coli_S88 # Pathway: not_defined # 1 153 1 153 153 288 100.0 7e-77 MAKTKGDLVLKALRKAGLYSNATLTDADPQAIEDAINDLEDMMAAWQAKGIELGYQFADT ENGIMPLPDDDSGIPAWANDGVALKLAVQVCMDNVIQPSDALLTAADSAYQTICIALTKI PPLERRNDMPRGSGNKSAFTWNRFYIEKDDPST >gi|296918691|gb|GG773009.1| GENE 49 50415 - 50603 269 62 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2650 NR:ns ## KEGG: UTI89_C2650 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 62 14 75 75 115 100.0 7e-25 MARTMLYKPGNMITCGQFAVDYVIVDDEEVKSHLKKGWVKTPEETATKQKVAKAEEDGEN EG >gi|296918691|gb|GG773009.1| GENE 50 50645 - 51898 996 417 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2651 NR:ns ## KEGG: UTI89_C2651 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 417 1 417 417 810 100.0 0 MANQLAKDLEIMFENYVEGFEAACVVSRNAKKFRPGDTAMQRAGDVLYRPQHYHMNIEEG LDLSSKTPTALVQRLVPSVFKEPKNILYTLDAREMRDPEHKTEAGRAAGMRLAAQIDSDL ISMVTQRATNVITMADSTAGTQGRDLWNCAAGIDATMTAIGVPQGINRRSFWNPFNYKDL AGELGHRAYAQGATLTAYEKAQIPPVASFDSYKTDISGRLPKGSTESLTVSGQPEHKVEA KDSNGMPVDNRQGTITVSASGLQVGDAFTIAGVNSVHQITKDTTGQPQVFRVLAVSGTTV TISPKILPVENTDVASRPYANVDAKPAESAAITILNKNAAPANLFWADGSVELMYGKLAF PTGQGPQVMTATTEQGATLIMSYAFDHIKGVTTARFTTLYGCSVLVPEYTGIVIAGQ >gi|296918691|gb|GG773009.1| GENE 51 51917 - 52810 754 297 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2515 NR:ns ## KEGG: ECS88_2515 # Name: not_defined # Def: bacteriophage protein # Organism: E.coli_S88 # Pathway: not_defined # 1 297 1 297 297 411 100.0 1e-113 MDQMAENTPEVEIETDASEQIPDDVELAEKVETEDGSESSGNDAEEATETDDDESEQEFY FGDEKLDSPTSEDGAEHGLVKHLRKTIKEKDRELKELMRQSQKPVEQQPVITQPPRMPKL DDEDIGFDEEIYQQRMAKWAEDNGKYQQQEMARKQKEQELQAAYQERLSKYQQRVKALKV PGYQEAEQAVLEEIPIETQNAILFESEKPEIVVLALGRNAELRKQLAEATNPVAIGRLLE RIESKARIMPKAKTTAATTPTVKGSNGAVINNLDKLKAKALETGDWTPYFAAKKAKK >gi|296918691|gb|GG773009.1| GENE 52 52901 - 55099 1390 732 aa, chain - ## HITS:1 COG:no KEGG:SPC_1298 NR:ns ## KEGG: SPC_1298 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_C # Pathway: not_defined # 1 726 1 726 732 1388 99.0 0 MAEKKMTDWHRKVLCNFDNAWSATQDMREQIIEAQRFVRVSGAQWEGSTNAGYSFDEGRF EHYPRFELNKISRECDRIIGEYRQNRISVKFRPKDDKASEALAEKMNGKFRADYQETSGG EACDNAFDDAVTGGFGCFRMCADYEDEMDPSNEQRRISLLPVYDPATCVFFDQDSKQYDR SDAMWAMEMFSMTPKAFEAEYPDSIAASLSRDDTGTQYDWSTPDAIYVGRYYEVRIEKVK LTAWRNPVSGETAIYDEDQIKDIVDELTDGAFELIGERTVKKRRVYCGLLSGAEWLEEPK RIPGEHIPLIPVYGRRSFVDNQERIEGHAAKAMDAQRLENLMVSMIADNATQAGGDGIPI VDVDFIPGPLMNHWAERNKKRPAVLPMTSKKDKNGTVISEAQVAGWTPPTQMPPALAGLL QYTGTAIQQITGASQLENMPSNVATDTVDSIFNRMDTQSYIYMDNMAKSMRRAGVVWLSM AREVYGSDTPMRIVNEDGSDDVALMTGEVVDRQTGQVIALNDLSQGNYEVTVDVGQSFAT RRDATVKSLLSMLALIPPGTPKHDLVSSMILDNMDGEGMDDLKEYNRNQLLLSGVIKPRT PEEQQMVEQAKQQQASQPDPAMVAAQGQLLAGQAELQKAQNEQAAIQVKAFQAQTDAQVA AANVVKILASADSQQKSDIREALKLLGQFQQQQGDNARADAELVLKSQAQGHAQRMDISS ILQKSTQQQPQQ >gi|296918691|gb|GG773009.1| GENE 53 55101 - 56516 895 471 aa, chain - ## HITS:1 COG:HI1410 KEGG:ns NR:ns ## COG: HI1410 COG1783 # Protein_GI_number: 16273317 # Func_class: R General function prediction only # Function: Phage terminase large subunit # Organism: Haemophilus influenzae # 51 449 3 382 394 310 44.0 5e-84 MTSINPIFEPFIEAHRYKVAKGGRGSGKSWAIARLLVEAARRQPVRILCARELQNSISDS VIRLLEDTIEREGYSAEFEIQRSMIRHLGTNAEFMFYGIKNNPTKIKSLEGIDICWVEEA EAVTKESWDILIPTIRKPFSEIWVSFNPKNILDDTYQRFVVNPPDDICLLTVNYTDNPHF PEVLRLEMEECKRRNPTLYRHIWLGEPVSASDMAIIKREWLEAATDAHKKLGWKAKGAVV SAHDPSDTGPDAKGYASRHGSVVKRIAEGLLMDINEGADWATSLAIEDGADHYLWDGDGV GAGLRRQTTEAFSGKKITATMFKGSESPFDEDAPYQAGAWADEVVQGDNVRTIGDVFRNK RAQFYYALADRLYLTYRAVVYGEYADPDDMLSFDKEAIGEKMLEKLFAELTQIQRKFNNN GKLELMTKVEMKQKLGIPSPNLADALMMCMHCPESAAQPDYSSYSIPCGVG >gi|296918691|gb|GG773009.1| GENE 54 56513 - 56953 231 146 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2519 NR:ns ## KEGG: ECS88_2519 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 146 1 146 146 283 100.0 2e-75 MARPTKYQEAYAEQARKLCLLGYTDAELADFFEVSESTINKWKLDYPEFSESIKKGKAVA DAEVSDRLYQRAMGFVAPDIDIRVIENRIVETPLEKYYPPDTTAAIFWLKNRQKDKWRDK VDHELTGKDGGAIQIETSPMSTLFGK >gi|296918691|gb|GG773009.1| GENE 55 56956 - 57198 261 80 aa, chain - ## HITS:1 COG:no KEGG:SARI_02653 NR:ns ## KEGG: SARI_02653 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 1 80 39 118 118 140 96.0 1e-32 MAEIIPMTEEQKFQLEIYKLVMNQNAAAEEAFQFIGTDELKLELFKIHFQSGGANSDITT RTIEAVRKSKEALYLFTTGA >gi|296918691|gb|GG773009.1| GENE 56 57499 - 58023 313 174 aa, chain - ## HITS:1 COG:PM1774 KEGG:ns NR:ns ## COG: PM1774 COG3646 # Protein_GI_number: 15603639 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Pasteurella multocida # 3 131 22 143 239 88 40.0 6e-18 MNNHSVIPAFDFREMVQAKNGEVVTTSRKIAKYFGKRHGDVLRKIEQVKADCSREFSQRN FASADYIDEQGKVRPMYSLTKDGWIMVVMGFTGKAAAAIKESYIAAFNWMAEQLSRRMAI GEEMQHRYAIKETRSKLKGTIGSRLMNERKKEKRVLAVEHEYILQVTQPELLIN >gi|296918691|gb|GG773009.1| GENE 57 58366 - 58833 125 155 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_4876 NR:ns ## KEGG: ECIAI39_4876 # Name: Rz # Def: endopeptidase from phage origin (lysis protein Rz) (EC:3.1.3.16) # Organism: E.coli_IAI39 # Pathway: not_defined # 1 155 5 159 159 270 96.0 1e-71 MSRVTAIISALVICIIVCLSWAVNHYRDNAIAYKEQRDKKVSELKQAAATITDMQRRQRA ADALDAKYTKELADAKAENDALRRKLDNGGRVLVKGKCPVPSSAETSGASGMGNDATVEL SPVAGRNVLGVRDGIIRDQTALRTLQEYIRTQCLR >gi|296918691|gb|GG773009.1| GENE 58 58830 - 59306 413 158 aa, chain - ## HITS:1 COG:ECs1622 KEGG:ns NR:ns ## COG: ECs1622 COG4678 # Protein_GI_number: 15830876 # Func_class: G Carbohydrate transport and metabolism # Function: Muramidase (phage lambda lysozyme) # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 303 95.0 7e-83 MVEINNQRKAFLDMLAWSEGTDNGRQKTRNHGYDVIVGGELFTDYSDHPRKLVTLNPKLK STAAGRYQLLSRWWDAYRKQLGLKDFSPKSQDAVALQQIKERGALPMIDRGDIRQAIDRC SNIWASLPGAGYGQFEHKADSLIAKFKEAGGTVREIEV >gi|296918691|gb|GG773009.1| GENE 59 59290 - 59607 183 105 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2525 NR:ns ## KEGG: ECS88_2525 # Name: not_defined # Def: lysis protein S and lysis inhibitor (holin protein) # Organism: E.coli_S88 # Pathway: not_defined # 1 105 3 107 107 188 100.0 6e-47 MPEKHDLLAAILAAKEQGIGAILAFAMAYLRGRYNGGAFTKTVIDATMCAIIAWFIRDLL DFAGLSSNLAYITSVFIGYIGTDSIGSLIKRFAAKKAGVEDGGNQ >gi|296918691|gb|GG773009.1| GENE 60 60286 - 60909 212 207 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A0302 NR:ns ## KEGG: EcHS_A0302 # Name: not_defined # Def: antitermination protein Q # Organism: E.coli_HS # Pathway: not_defined # 1 207 1 207 207 399 99.0 1e-110 MRLESAAKFHSPKSPMMSDSPRATASDSLSGTDVMAAMGMAQSQAGFGMAAFCGKHELSQ NDKQKAINYLMQFAHKVSGKYRGVAKLEGNTKAKVLQVLATFAYADYCRSAATPGARCRD CHGTGRAVDIAKTEQWGRVVEKECGRCKGVGYSRMPASAAYRAVTMLIPNLTQPTWSRTV KPLYDALVVQCHKEESIADNILNAVTR >gi|296918691|gb|GG773009.1| GENE 61 61091 - 61453 288 120 aa, chain - ## HITS:1 COG:ECs2268 KEGG:ns NR:ns ## COG: ECs2268 COG4570 # Protein_GI_number: 15831522 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 5 120 4 119 119 147 63.0 7e-36 MNEYQFVLPYPPSVNTYWRRRGSQYYISDKGQKYRKDVQQIIRQLKLDIFTKSRLRIKVI VDVPDSRRRDLDNILKGLLDSLIHAGFAEDDEQFDDIRVIRGVKVPGGRLGIKITELENA >gi|296918691|gb|GG773009.1| GENE 62 61740 - 62009 209 89 aa, chain - ## HITS:1 COG:no KEGG:E2348C_2523 NR:ns ## KEGG: E2348C_2523 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 1 89 1 89 89 156 100.0 2e-37 MSDFSELISFKKDREEMRTESVYYVQHRNKRSVLDQELVITGDLAFRTYKASMEMKDFPK CGSEREAALKLAEWMQRMAAAIENYWSEP >gi|296918691|gb|GG773009.1| GENE 63 62002 - 62172 62 56 aa, chain - ## HITS:1 COG:no KEGG:ECO111_2700 NR:ns ## KEGG: ECO111_2700 # Name: not_defined # Def: putative NinF protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 55 1 55 56 83 94.0 3e-15 MIDPNRSYEQESVERALTCANCGQKLHVLEVHMCEHCCAELMSDPNSSMYEEEDDE >gi|296918691|gb|GG773009.1| GENE 64 62348 - 62758 365 136 aa, chain - ## HITS:1 COG:no KEGG:ECO26_0851 NR:ns ## KEGG: ECO26_0851 # Name: not_defined # Def: putative recombination protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 136 1 136 136 254 100.0 6e-67 MKQTIFLRTKQQQQAAINAILATPLDKDKPVTIRITDYKRNLDQNAKFHAMLADIARQVQ WCDKWLKPEQWKVLLISGHAVATKQEADVLPGLEGEYVNIRESSAQMSVKRMASLIEYTT AWAIGQGVRFTDRRYE >gi|296918691|gb|GG773009.1| GENE 65 62730 - 62975 212 81 aa, chain - ## HITS:1 COG:no KEGG:ECO26_3366 NR:ns ## KEGG: ECO26_3366 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 81 38 118 118 150 100.0 2e-35 MDIRHSLNEWWTLWQASRAAIELDIDWPESNDDFWKDGEEGAYAMGYEDGRDKTVIAVMK AIRAAGIKEKNFDEANNIPPN >gi|296918691|gb|GG773009.1| GENE 66 62974 - 63150 74 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLENAKYLSPFLASVIISNGNLNFLATYSSNFFLDSSIGTYPQFNSQNATPLLQRQQA >gi|296918691|gb|GG773009.1| GENE 67 63104 - 63310 245 68 aa, chain - ## HITS:1 COG:no KEGG:ECO111_0802 NR:ns ## KEGG: ECO111_0802 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 68 1 68 68 76 91.0 3e-13 MAELIFSALRILGAMWMVSTFIVVVGSFVRLVGEGKDLVGVLFGSIFLWVIIGVMPVVVA KVAWRFVS >gi|296918691|gb|GG773009.1| GENE 68 63387 - 65267 1134 626 aa, chain - ## HITS:1 COG:no KEGG:E2348C_0676 NR:ns ## KEGG: E2348C_0676 # Name: not_defined # Def: predicted replication protein # Organism: E.coli_0127 # Pathway: not_defined # 1 626 1 626 626 1300 99.0 0 MTPSELSDLLWAQVDRVAPHLLPNGKKEGHEWVAGNVNGDKGNSLKVNLSGKKKWADFAE GDGGDMLDLWMACRGINLHQAMQEAKAFLGIKDDDHHFDAKREKKFSRPDRKKIARYVTR TESHLEYLQSRGISPEVVKRYEVVSGKVWNGERELDALVLPYKRDGELLQVKRISTERPD GKKVIMAEGDCEPCLFGWQALDAGVRAVVLCEGEIDCMSYAQYGISALSVPFGGGKGAKQ QWIEFEYHNLDRFEEIFISMDVDDVGREAAREIASRLGEHRCRLVTLPYKDINECLMNGV TEDEIWQYIGTASYFDPEELYSAREFYQDTINAFYGKQQYLFNPPWESLADKFQFREAEL TLVNGVNGHGKTEVVGHMALEAMRQGVKTCIASLELKPGILLKRLTRQATCCKMPPVLEI DSAFKFYDERLWVFGLTGTAKADRLIEIFDYARRRYGIQLFIIDSLMKCGIGDDDYNGQK AFVDSICDFKNKTNSHVILVTHSRKGDSEEKPTGKMDVKGSGAITDLTDNLFIIWRNKAR ERALQRVQSGEKMSEKDEQLLASPASVLMLEKQRNGEGWEGGVPLFLDEQSHQFLQLESG SPYSYIANMPKSEYDEAWRQENVTEY >gi|296918691|gb|GG773009.1| GENE 69 65264 - 65371 59 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSKIKSLLVAGYNHGWLSISFVDFWFKNLNLRES >gi|296918691|gb|GG773009.1| GENE 70 65375 - 66235 115 286 aa, chain - ## HITS:1 COG:no KEGG:SeSA_A0620 NR:ns ## KEGG: SeSA_A0620 # Name: not_defined # Def: GP59 # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 286 1 286 286 532 99.0 1e-150 MSNLATVTHLRPSQRPVERRVAEVEDGYTRLANALYEELIGADLTKNQSKVAHAICRKTY GYGKKMDRISDSQLAQITRLPRQKVNKAKNELIAMKVILREGQQIGPNKNIEEWQIEGCH YSGDNVTALVTKSVTKTVTALSPKQGHTKETITKEKRNNKNTMSESVRTECEKSPDRHEE TDKAFEEIFWCAGMRKAGKKNAASAFRTQFREWRKTTRGTASEFATMLAEDIACRNGKQF GFDRLLPSSYLNGQRWNDEKPETIQPQSKPSSAITVSKTGYVFFDR >gi|296918691|gb|GG773009.1| GENE 71 66228 - 66374 70 48 aa, chain - ## HITS:1 COG:no KEGG:ECO111_2710 NR:ns ## KEGG: ECO111_2710 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 48 1 48 48 68 100.0 8e-11 MTKQLSPYQDKIHKHILRDRFLSSFKQPGRFRAELEKVKLMQKEKGHE >gi|296918691|gb|GG773009.1| GENE 72 66410 - 66691 319 93 aa, chain - ## HITS:1 COG:no KEGG:SSPA2252 NR:ns ## KEGG: SSPA2252 # Name: not_defined # Def: transcriptional activator-regulatory protein # Organism: S.enterica_Paratyphi_AKU12601 # Pathway: not_defined # 1 93 1 93 93 149 90.0 4e-35 MGTIATKSKKAARIESALLNKLALMGQKTFARAMGVPEYQVSRWKNGFFSQVSMMLAVLE YGIEDDEMAELTKRLADYLTKEKAPKNGEFFEA >gi|296918691|gb|GG773009.1| GENE 73 66808 - 67038 274 76 aa, chain - ## HITS:1 COG:no KEGG:ECO111_2612 NR:ns ## KEGG: ECO111_2612 # Name: not_defined # Def: putative antirepressor protein Cro # Organism: E.coli_O111_H- # Pathway: not_defined # 1 73 1 73 93 108 72.0 8e-23 MEELRLYLNSLSLEEQREFATKCGTSIGYLRKALSRNHELGAALCVLIEKFSNGEVTRKD LHPVDWESIWPELMAA >gi|296918691|gb|GG773009.1| GENE 74 67264 - 67833 240 189 aa, chain + ## HITS:1 COG:Z1447_2 KEGG:ns NR:ns ## COG: Z1447_2 COG2932 # Protein_GI_number: 15800947 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 79 182 1 104 115 157 68.0 1e-38 MLYPEGKSGKKRIADDMMELIEKSFNLPRGWMDMLADGKAGATDHLEFAGNVRAGFVPVI GEAVLGVDGSVDMIEFRSGWLSIYSGDKDAYGLKVKGDSMWPRIQSGEYVVIEPNTPVHP GDEVFVRTKDGHNMIKIMNKTRDGDYQFSSINSDHRPITLPVEEVDKMHFVSAIVKHTRY VDQDDLPKV >gi|296918691|gb|GG773009.1| GENE 75 67941 - 68144 122 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315288266|gb|EFU47665.1| ## NR: gi|315288266|gb|EFU47665.1| hypothetical protein HMPREF9539_01825 [Escherichia coli MS 110-3] # 1 67 38 104 104 131 100.0 1e-29 MKKKHLIHEAESIIKKFKGMSYDDMSSEQIAMYKCAIERLDYLNGLKPKHTPVESKLPQW PSNPNSF >gi|296918691|gb|GG773009.1| GENE 76 68576 - 68902 321 108 aa, chain + ## HITS:1 COG:no KEGG:BWG_3701 NR:ns ## KEGG: BWG_3701 # Name: not_defined # Def: lambda genome from map unit 74 backward to map unit 67 # Organism: E.coli_BW2952 # Pathway: not_defined # 1 108 1 107 107 155 90.0 5e-37 MDAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRPILSLNRKPKSRVESALNPIDLTVL AEYHEQIESNLQRIERKNQRTWYSKPRSEMGVTCVGRQKMKLGSKPLI >gi|296918691|gb|GG773009.1| GENE 77 68911 - 68997 101 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEEEFEEFEEHPQDVMEQYQDYPYDYDY >gi|296918691|gb|GG773009.1| GENE 78 68981 - 69181 127 66 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1165 NR:ns ## KEGG: ECS88_1165 # Name: not_defined # Def: restriction inhibitor protein ral (antirestriction protein) # Organism: E.coli_S88 # Pathway: not_defined # 1 66 1 66 66 122 98.0 3e-27 MTTTIDTNQWCGQFKRCNGCKLQSECMVKPEEMFPVMEDGKYVDKWAIRTTAMIARELSK QNNKAA >gi|296918691|gb|GG773009.1| GENE 79 69240 - 69662 94 140 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C2681 NR:ns ## KEGG: UTI89_C2681 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 140 1 140 140 268 100.0 7e-71 MEEQANKILVELLQKASNGIDAAVSFSQAQIPDVVRQLLTWSFVHSALFQVAGLLLLIAA MKLPSFARTARNNGERWTSLDGCPNDRYFISSFYYDICTVFAPIFGSIIGVLIIAFNFEW LKIWLAPKLFLIEYAASLVK >gi|296918691|gb|GG773009.1| GENE 80 69960 - 70334 274 124 aa, chain + ## HITS:1 COG:no KEGG:EFER_2078 NR:ns ## KEGG: EFER_2078 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 122 54 175 339 150 100.0 2e-35 MSFVPDITTAKGRKEIASLAYKVAQTKTYLDGLGKDLVAELKEIPKLIDANRKTVRDRLD ELKAKARQPLTDYEEEQARIKAEEEAKAAAEALAKQIESDHEIAILMDREFDRQREEARL KARA >gi|296918691|gb|GG773009.1| GENE 81 70291 - 70806 276 171 aa, chain + ## HITS:1 COG:no KEGG:E2348C_2541 NR:ns ## KEGG: E2348C_2541 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 3 171 154 322 322 104 95.0 2e-21 MTAKEKRQDSKREHEERLKREAEEKARAEAEAKAKAEIEAAARREAEAKAAAERAERERI EAEQRAQREAKEAAERAEREKQAAIEAERRKAQEEAERIRREAEAKEQARIAEEKRIKDE EERRAKDKAHRKEVNNKILADLIKVGASEDVAKNIITAIVKGEVFATKITY >gi|296918691|gb|GG773009.1| GENE 82 70831 - 70962 71 43 aa, chain + ## HITS:1 COG:no KEGG:E2348C_2542 NR:ns ## KEGG: E2348C_2542 # Name: not_defined # Def: predicted regulatory protein # Organism: E.coli_0127 # Pathway: not_defined # 1 43 1 43 43 75 100.0 8e-13 MIYAIAGGARMGAFQLNESLLERITRKLRDGWKRVEVLLCAMK >gi|296918691|gb|GG773009.1| GENE 83 70947 - 71099 95 50 aa, chain + ## HITS:1 COG:no KEGG:SeSA_A0612 NR:ns ## KEGG: SeSA_A0612 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 50 1 50 50 79 100.0 5e-14 MRNEIAINHQMLRAAQNKAVIARFIGDSKMWLEANKAMKSAINLPWYRRK >gi|296918691|gb|GG773009.1| GENE 84 71175 - 71345 122 56 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2547 NR:ns ## KEGG: ECS88_2547 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 56 1 56 56 110 100.0 2e-23 MSLATTVKESKLQRRMYTQKALWYRHNGDREGMRVCLNLSRVEVLNQRYFLGPCPF >gi|296918691|gb|GG773009.1| GENE 85 71356 - 71961 399 201 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2548 NR:ns ## KEGG: ECS88_2548 # Name: erf # Def: DNA single-strand annealing protein; essential recombination function protein Erf # Organism: E.coli_S88 # Pathway: not_defined # 1 201 11 211 211 363 100.0 2e-99 MSKEFYARLAAIQENLNAPKNQYNSFGKYKYRSCEDILEGVKPLLNGLFLSISDEVVLIG DRYYVKATATITDGENSHTATALAREEESKKGMDSAQVTGATSSYARKYCLNGLFGIDDA KDADTDEHKHQQNAAAKQSKPSLTPEQVLKAFTDAAMQKNTVEELKQAFAKAWKMLEGTP EQHKAQDVYNIRRDELEGATA >gi|296918691|gb|GG773009.1| GENE 86 71961 - 72344 273 127 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2646 NR:ns ## KEGG: EC55989_2646 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 127 31 157 157 216 95.0 4e-55 MAHSITVRLNKPAREFQGGENIGFNIRAGVQYYDRQTKKKEWTNYSAVVFAKPGAQADYY RSVLVEGGIVEITGENIRVDVYQGQNGQSITLELLNAKIGFATSGNSQQQQSSNHQNNPE YDDSIPF >gi|296918691|gb|GG773009.1| GENE 87 72368 - 72664 155 98 aa, chain + ## HITS:1 COG:no KEGG:EFER_2084 NR:ns ## KEGG: EFER_2084 # Name: abc # Def: anti-RecBCD protein 2 # Organism: E.fergusonii # Pathway: not_defined # 1 98 8 105 105 179 100.0 4e-44 MPAPLYGADDPRRCSGNSVSEVLDKFRKNYDRIMSLPQETKEEKEFRHCIWLAEKEERER IYQTSIRPFRKATYTHFPEYIDPRLRNYRSRYGAISND >gi|296918691|gb|GG773009.1| GENE 88 72768 - 73277 361 169 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C2689 NR:ns ## KEGG: UTI89_C2689 # Name: hkaH # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 169 10 178 178 301 100.0 7e-81 MSLIEMDGFLKGKCIPSDLKVNETNAEYLVRKFGELESKLETALRECSSAGITIDNLEAK CAKMAAENTSLKQSEKEFNDFCREEFSEWEDDVTETPATDAFLAEVRAQGVDAAIEAAKN LVAQEYEYKDFKAAQSDCCMHPGSDLVGKVEMTEWLVDFAAQLRKGGNQ >gi|296918691|gb|GG773009.1| GENE 89 73274 - 73573 95 99 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2552 NR:ns ## KEGG: ECS88_2552 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 99 1 99 99 204 100.0 7e-52 MTVCLIDKRRRGQQIPSVEMPNHTWFCVLDIDGMDTLVDTRHYCDTATATPAKAKKMAAL IENWTPPDGWCNGNDRDWHEKMKGYICDFLRKCNGFRGM >gi|296918691|gb|GG773009.1| GENE 90 73575 - 74147 404 190 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2553 NR:ns ## KEGG: ECS88_2553 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 190 1 190 190 355 100.0 5e-97 MTKINYQALREAAERAIPAMERLLMLPVDDDLLSEQELKDYGVDIDALNAFKFLTGPETV LALLDERERNQQYIKRRDQENEEIALTVGKLRVELEAAEKRIAELEAEPVSQTYKLNELS GNYPVTPDGWISCSERMPAQDDWILIYSKHGEYMAGQVQGEYVELSDGTLSWLGNALYWM PLPEPPQEVN >gi|296918691|gb|GG773009.1| GENE 91 74147 - 74431 241 94 aa, chain + ## HITS:1 COG:no KEGG:ECB_00728 NR:ns ## KEGG: ECB_00728 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 94 19 112 112 168 91.0 6e-41 MVSFAKYTIIDWIAFIQVLLIWFYMAYRSGQWIVSVACSNGWRWWNRKNKKALALDSFYE AFNLNSLKPGSVVVVTTQSGMTIQIHKPKEEGRG >gi|296918691|gb|GG773009.1| GENE 92 74424 - 74708 275 94 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2555 NR:ns ## KEGG: ECS88_2555 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 94 1 94 94 182 98.0 3e-45 MANLQLAVKGEYFDAMIRGEKTEEYRLCNDYWNKRIMFREYDRLIITKGYPKRDDSSRRI DVPYGGYEIKTITHPHFGDKPVKVFAIKVNIDNE >gi|296918691|gb|GG773009.1| GENE 93 74781 - 74948 125 55 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2556 NR:ns ## KEGG: ECS88_2556 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 55 1 55 55 100 100.0 1e-20 MHFRVTGEWNGEPFNRVIEAENINDCYDHWMLWAQIAHADVTNIRIEELKEHQAA >gi|296918691|gb|GG773009.1| GENE 94 75006 - 75206 204 66 aa, chain + ## HITS:1 COG:no KEGG:JW5387 NR:ns ## KEGG: JW5387 # Name: torI # Def: response regulator inhibitor for tor operon # Organism: E.coli_J # Pathway: not_defined # 1 66 1 66 66 137 100.0 2e-31 MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHGRARWLYRDHCEFKNKL LSRANG >gi|296918691|gb|GG773009.1| GENE 95 75394 - 76329 356 311 aa, chain - ## HITS:1 COG:dsdC KEGG:ns NR:ns ## COG: dsdC COG0583 # Protein_GI_number: 16130296 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 311 1 311 311 620 98.0 1e-177 MEPLREIRNRLLNGWQLSKLHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQ LFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVP ALGDFTRRYPSISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLAHHFLMDEEILPVCSP EYAHRHDLTNTVINLRHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRSDL AVIAAMNHIGVAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFI TWLREQVKTTS >gi|296918691|gb|GG773009.1| GENE 96 76547 - 77884 1398 445 aa, chain + ## HITS:1 COG:dsdX KEGG:ns NR:ns ## COG: dsdX COG2610 # Protein_GI_number: 16130297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 445 1 445 445 711 99.0 0 MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIG GTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEV GVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIV YGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIA LMLVKTIAELNMARESGLYTLLEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTEN GFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSA TVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETF KYYTTATFIASVIALAGTFLLSFII >gi|296918691|gb|GG773009.1| GENE 97 77902 - 79230 1189 442 aa, chain + ## HITS:1 COG:dsdA KEGG:ns NR:ns ## COG: dsdA COG3048 # Protein_GI_number: 16130298 # Func_class: E Amino acid transport and metabolism # Function: D-serine dehydratase # Organism: Escherichia coli K12 # 1 442 1 442 442 857 98.0 0 MENAKMNSLIAQYPLVEDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFA PYLAKAFPETAAAGGIIESELVAIPAMQKRLEKEYHQPIAGQLLLKKDSHLPISGSIKAR GGIYEVLAHAEKLALEAGLLTLEDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSA RIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDEN SRTLFLGYSVAGQRLKAQFAQQGRIVNADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVH CFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGF YTLSDQTMYDMLSWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNATHL VWATGGGMVPEEEMNQYLAKGR >gi|296918691|gb|GG773009.1| GENE 98 79338 - 80876 416 512 aa, chain - ## HITS:1 COG:emrY KEGG:ns NR:ns ## COG: emrY COG0477 # Protein_GI_number: 16130299 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 512 1 512 512 910 99.0 0 MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTISGFLGASTDEGTWVIT SFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMA GPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPILGGYICDNFSWGWIFLINVP MGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVGGLQIMLDKGRDLDWFNSSTIIL LTVVSVISLISLVIWESTSENPILDLSLFKSRNFTIGIVSITCAYLFYSGAIVLMPQLLQ ETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNKIDMRLLVTFSFLMYAVCYYWRSVTFM PTIDFTGIILPQFFQGFAVACFFLPLTTISFSGLPDNKFANASSMSNFFRTLSGSVGTSL TMTLWGRRESLHHSQLTATIDQFNPVFNSSSQIMDKYYGSLSGVLNEINNEITQQSLSIS ANEIFRMAAIAFILLTVLVWFAKPPFTAKGVG >gi|296918691|gb|GG773009.1| GENE 99 80876 - 81916 769 346 aa, chain - ## HITS:1 COG:ECs3247 KEGG:ns NR:ns ## COG: ECs3247 COG1566 # Protein_GI_number: 15832501 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli O157:H7 # 1 346 42 387 387 626 99.0 1e-179 MISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNL ANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEALEHTKDTLI SSKAALNAAIQAYKANKALVMNTPLNRQPQVIEAADATKEAWLALKRTDIKSPVTGYIAQ RSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGR VTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTK NEDIAEMPDLASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL >gi|296918691|gb|GG773009.1| GENE 100 82455 - 83069 329 204 aa, chain + ## HITS:1 COG:ECs3248 KEGG:ns NR:ns ## COG: ECs3248 COG2197 # Protein_GI_number: 15832502 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 204 1 204 204 392 100.0 1e-109 MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNG IQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGY CYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTYKS RLMEKLECKSLMDLYTFAQRNKIG >gi|296918691|gb|GG773009.1| GENE 101 83728 - 86667 1181 979 aa, chain + ## HITS:1 COG:ECs3249_2 KEGG:ns NR:ns ## COG: ECs3249_2 COG0642 # Protein_GI_number: 15832503 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 313 734 1 422 422 831 98.0 0 MISRYFTHSLNVVKYYNSPRQYNFLLTRKDSIVLNEVLNRFVDALTNEVRYEVSQNWLDT GNLAFLNKPLELTEHEKQWIKQHPDLKVLENPYSPPYSMTDETGSVRGVMGDILNIITLQ TGLNFSPITVSHNIHAGTQLNPGGWDILPAAIYSEDRENNVSFAEVFITTPYVFVMQKAP DSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIKVDNASAAFHKVKEGELDALVATQLN SRYMIDHYYPNELYHFLIPGVQNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKW IKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLENQISFR KALSDSLPNPTYVVNWQGNVISHNSAFEHYFTDDYYKNAMLPLENSESPFKDVFSNTHEV TAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASEHAVYICGWQDITETRDLIHAL EVERNKAINATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATG QSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFAAIAASKSIALSCSSTLPE RYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIDDNHAVIKMTIMDSGSGLSQ EEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTIFTITIPVEI TQQVAAVEAKAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKV SMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLNCGMNLCLF KPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLP AAFHALEAGDNRTFHQCIHRIHGAANILNLQKLINISHQLEITPVSDDSKPEILQLLNSV KEHIAELDQEITVFCQQND >gi|296918691|gb|GG773009.1| GENE 102 86723 - 87868 405 381 aa, chain - ## HITS:1 COG:yfdE KEGG:ns NR:ns ## COG: yfdE COG1804 # Protein_GI_number: 16130303 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 1 381 14 394 394 790 98.0 0 MTNNECKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQ SLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEIN PRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYL FSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATGKSPQRLGNRHPYMAPFD VFDTQDKPITICCGNDKLFSVLCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKT QAAEVWLARIHEVGVPVAPLLSVAEAINLPQTQARNMLIEAGGIMMPGNPIKISGCADPH VMPGAATLDQHGEQIRQEFSS >gi|296918691|gb|GG773009.1| GENE 103 87942 - 88886 548 314 aa, chain - ## HITS:1 COG:ECs3252 KEGG:ns NR:ns ## COG: ECs3252 COG0679 # Protein_GI_number: 15832506 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 314 1 314 314 531 100.0 1e-151 MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYALPAALFVSITRANREM IFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPI YGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKKNSNLSALISAAKEPVVWAPV LATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHKFEFSAEIAYNTFLKLIL MPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFV VTAPLWIYVSRLVS >gi|296918691|gb|GG773009.1| GENE 104 88956 - 90650 1061 564 aa, chain - ## HITS:1 COG:ECs3253 KEGG:ns NR:ns ## COG: ECs3253 COG0028 # Protein_GI_number: 15832507 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 564 1 564 564 1075 99.0 0 MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYA AAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEE LDQMNAAKPYAKAAFRVNQPQDLGIALARAIRGSVSGRPGGVYLDLPANVLAATMEKDEA LTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQSDEQLREFIESAQI PFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQ LDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMH EKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTW GVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRG DGVDLSGAGAPSPTDLLHHARYDKLMDAFRGLGYNVTTTDELRHALTTGIQSRKPTIINV VIDPAAGTESGHITKLNPKQVAGN >gi|296918691|gb|GG773009.1| GENE 105 90704 - 91954 1029 416 aa, chain - ## HITS:1 COG:yfdW KEGG:ns NR:ns ## COG: yfdW COG1804 # Protein_GI_number: 16130306 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 1 416 1 416 416 830 100.0 0 MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYF TMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLI FGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPPLVSAAALGDSNTGMHLLIGL LAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAVP RGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTCKAIGKPEWITDPAYSTAHA RQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVE QPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEHTAAVLQELGYSDDEIAAMKQNHAI >gi|296918691|gb|GG773009.1| GENE 106 92466 - 93101 608 211 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2570 NR:ns ## KEGG: ECS88_2570 # Name: yfdX # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 211 1 211 211 325 100.0 6e-88 MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAAERISEQGLYAMRDV QVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNVNDDQYIVINASVGIS ESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQK LLDKKQYYEANLALKGAEDGIIVDSEALFVN >gi|296918691|gb|GG773009.1| GENE 107 93397 - 93672 60 91 aa, chain + ## HITS:1 COG:no KEGG:APECO1_4160 NR:ns ## KEGG: APECO1_4160 # Name: ypdI # Def: putative lipoprotein involved in colanic acid biosynthesis # Organism: E.coli_APEC # Pathway: not_defined # 1 91 1 91 91 159 100.0 3e-38 MKVNLMLFSLFLLVSIMACNVFAFSISGGGSEASYKETEKTSAMTTTHSTKIQPSQAILL KMREDAPPLNLTEEIPPPFPTKANYLIHPVR >gi|296918691|gb|GG773009.1| GENE 108 93749 - 93991 268 80 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2572 NR:ns ## KEGG: ECS88_2572 # Name: yfdY # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 80 1 80 80 110 100.0 2e-23 MIYLWMFLALCIVCVSGYIGQVLNMISAVSSFFGMVILAALIYYFTMWLTGGNELVTGIF MFLAPACGLMIRFMVGYGRR >gi|296918691|gb|GG773009.1| GENE 109 94344 - 95264 900 306 aa, chain + ## HITS:1 COG:ECs3258 KEGG:ns NR:ns ## COG: ECs3258 COG1560 # Protein_GI_number: 15832512 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli O157:H7 # 1 306 23 328 328 617 98.0 1e-176 MFPKCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRIGTMARPFLKRRESIAR KNLELCFPQHSAKEREKMIAENFRSLGMALVETGMAWFWPDSRVRKWFDVEGLDNLKRAQ MQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQLMEWVQTRGRMRSNKAMIGRN NLRGIVSALKKGEAVWFAPDQDYGRKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVT MVRKADYSGYRLYITPEMEGYPTDENQAAAYMNKIIEKEIMRAPEQYLWIHRRFKTRPVG ESSLYI >gi|296918691|gb|GG773009.1| GENE 110 95756 - 96994 1392 412 aa, chain - ## HITS:1 COG:yfdZ KEGG:ns NR:ns ## COG: yfdZ COG0436 # Protein_GI_number: 16130311 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 412 1 412 412 847 100.0 0 MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCT VAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAIVTIGSKEGLAHLMLATLD HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFP SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFF TLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIA EQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSP GIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRADGLLPASSKHIHENAE >gi|296918691|gb|GG773009.1| GENE 111 97389 - 99068 1414 559 aa, chain + ## HITS:1 COG:ECs3260 KEGG:ns NR:ns ## COG: ECs3260 COG3275 # Protein_GI_number: 15832514 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Escherichia coli O157:H7 # 1 559 7 565 565 1122 99.0 0 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG WINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGF IVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAM TNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLW EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQS KINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDY IAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECG NRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEI AFYIPNQRTPVASQATLLL >gi|296918691|gb|GG773009.1| GENE 112 99083 - 99820 745 245 aa, chain + ## HITS:1 COG:ECs3261 KEGG:ns NR:ns ## COG: ECs3261 COG3279 # Protein_GI_number: 15832515 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 245 1 244 244 479 99.0 1e-135 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ QQQTSSTTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMN ITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFR QLMHL >gi|296918691|gb|GG773009.1| GENE 113 99833 - 100645 474 270 aa, chain + ## HITS:1 COG:ECs3262 KEGG:ns NR:ns ## COG: ECs3262 COG2207 # Protein_GI_number: 15832516 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 268 1 268 285 538 98.0 1e-153 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASHPASLPVGSLCIDFPRLDIVLRGEYG NLLEAKQQRMVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRNVVNMPPGNSQPRGD FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM ILQKYHLSIHDVAQRCGFPDSDYFCRVFPS >gi|296918691|gb|GG773009.1| GENE 114 100722 - 103217 2634 831 aa, chain - ## HITS:1 COG:ECs3263_2 KEGG:ns NR:ns ## COG: ECs3263_2 COG1080 # Protein_GI_number: 15832517 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli O157:H7 # 98 683 1 586 586 1099 97.0 0 MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEITFINHRQNAKADAKSSLALIGTGTLFN DSCSLNISGSDEEQARRVLEEYIQVRFIDSDSVQPTLAELTAHPLPSSLSRLNPDLLYGN VLASGVGVGTLTLLQSDSLDSYRVIPASAQDSTLLEHSLATLAEQLNQQLRERDGESKTI LSAHLSLIQDDEFAGNIRHLMAEQHQGLGAAIISNMEQICAKLSASASDYLRERVSDIRD ISEQLLHITWPELKPRNNLVLEKPTILVAEDLTPSQFLSLDLKNLAGMILEKTGRTSHTL ILARASAIPVLSGLPLDAIARYAGQPAVLDAQCGVLAINPNDAVSGYYQVAQTLADKRQK QQAQAAAQLAYSRDKKRIDIAANIGTALEAPGAFANGAEGVGLFRTEMLYMDRDSAPDEQ EQFEAYQQVLLAAGDKPIIFRTMDIGGDKSIPYLNIPQEENPFLGYRAVRIYPEFAGLFR TQLRAILRAASFGNAQLMIPMVHSLDQILWVKGEIQKAIVELKRDGLRHAETITLGIMVE VPSVCYIIDHFCDEVDFFSIGSNDMTQYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTA AHQRGKWVGICGELGGESRYLPLLLGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQ ACECRSAQEIEALLTAFAPEEDVRPLLALENIFVDQSFSNKEQAIQFLCGNLGVNGRTEH PFELEEDVWQREEIVTTGVGFGVAIPHTKSQWIRHSSISIARLVKPVDWQSEMGEVELVI MLTLGANEGMNHVKVFSQLARKLVNKNFRQSLFAAQDAQSILTLLETELTF >gi|296918691|gb|GG773009.1| GENE 115 103242 - 104279 875 345 aa, chain - ## HITS:1 COG:ypdE KEGG:ns NR:ns ## COG: ypdE COG1363 # Protein_GI_number: 16130316 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Escherichia coli K12 # 1 345 1 345 345 664 98.0 0 MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGSVLIRLNESTGPKVMIC AHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQSVRITTREECKIPGLLDGDRQGNDV SAMRVDIGARSCDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCYLLVTLLRE LHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDTACWAKNFDYGAANHRQIG NGPMLVLSDKSLIAPPKLIAWIETVAAEIGVPLQSDMFSNGGTDGGAVHLTGTGVPTVVM GPATRHGHCAASIADCRDILQMQQLLSALIQRFTRETVVQLTDFR >gi|296918691|gb|GG773009.1| GENE 116 104279 - 105364 1095 361 aa, chain - ## HITS:1 COG:ypdF KEGG:ns NR:ns ## COG: ypdF COG0006 # Protein_GI_number: 16130317 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli K12 # 1 361 1 361 361 691 96.0 0 MTLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGSGYVVISRESAHILVDSRYYADVE ARTQGYQLHLLDAMHTLATIVRQIIADEQLQTLGFEGQQVSWETAHRWQSELNAKLVSAT PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSECEIAAELEWFMRRQGAEKAS FDTIVASGWRGALPHGKASDKIVTAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESH PLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGHAIGIEVHE DPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTPQGAEVLYAMPKTVLLTGE A >gi|296918691|gb|GG773009.1| GENE 117 105380 - 106627 1583 415 aa, chain - ## HITS:1 COG:ECs3266 KEGG:ns NR:ns ## COG: ECs3266 COG1299 # Protein_GI_number: 15832520 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli O157:H7 # 1 415 1 415 415 699 99.0 0 MAIKKRSATVVHGASGAAAAVKNPQASKSSFWGELPQHVMSGISRMVPTLIMGGVILAFS QLIAYSWLKIPADIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVAN SIGGKLAFPAGFIGGLMSTQPTQLLNFDPSIMQWATSSPVPSTFIGALIISIVAGYLVKW MNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGAL MYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRR LTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLG AVQWFPESAIWAWPLVTNLGVYMAGIALGAVITALMVVFLRLMMFRKGKLLIDSL >gi|296918691|gb|GG773009.1| GENE 118 106649 - 106975 557 108 aa, chain - ## HITS:1 COG:ECs3267 KEGG:ns NR:ns ## COG: ECs3267 COG1445 # Protein_GI_number: 15832521 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 169 100.0 1e-42 MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATI IIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ >gi|296918691|gb|GG773009.1| GENE 119 107194 - 108159 1108 321 aa, chain - ## HITS:1 COG:ECs3268 KEGG:ns NR:ns ## COG: ECs3268 COG0837 # Protein_GI_number: 15832522 # Func_class: G Carbohydrate transport and metabolism # Function: Glucokinase # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 657 99.0 0 MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGC IAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFG GAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEGIILEILRAE IGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALSLFCVI MGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIV HDNPGLLGSGAHLRQTLGHIL >gi|296918691|gb|GG773009.1| GENE 120 108363 - 109619 994 418 aa, chain + ## HITS:1 COG:ECs3269 KEGG:ns NR:ns ## COG: ECs3269 COG0038 # Protein_GI_number: 15832523 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Escherichia coli O157:H7 # 1 418 1 418 418 632 98.0 0 MLHPRARTMLLLSLPAVAIGIASSLILIMVMKIASVLQNLLWQRLPGTLGIAQDSPLWII GVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPGLIVALILGLAGGVSLGPE HPIMTVNIALAVAIGARLLPRVNRMEWTILASAGTIGALFGTPVAAALIFSQTLNGSNEV PLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQMEMTDILSGAIVAAIAIAAGMVA VWCLPRLHAMMHQMKNPVFVLGIGGLILGILGVIGGPVSLFKGLDEMQQMVANQAFSTSD YFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVALGLMLHEHVPAVPAAITVSCAILGIV LVVTRDGWLSLFMAAVVVPNTTLLPLLCIVMLPAWLLLAGKPMMMVNRQKQQPPHDNV >gi|296918691|gb|GG773009.1| GENE 121 109734 - 110060 330 108 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2585 NR:ns ## KEGG: ECS88_2585 # Name: ypeC # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 108 1 108 108 165 100.0 5e-40 MFRSLFLAAALMAFTPLAANASEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYE WRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGRGHGHRH >gi|296918691|gb|GG773009.1| GENE 122 110201 - 111376 1513 391 aa, chain - ## HITS:1 COG:ECs3271 KEGG:ns NR:ns ## COG: ECs3271 COG1914 # Protein_GI_number: 15832525 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Escherichia coli O157:H7 # 1 391 22 412 412 659 100.0 0 MGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNL AEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFL ILMLQRRGQKPLEKVIGGLLLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAA GVLGATIMPHVIYLHSSLTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAF HFSGHTGVADLDEAYLTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFH IPLWVRRTVTMLPSFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLV NSKRVKQTGWVIVVLVVALNIWLLVGTALGL >gi|296918691|gb|GG773009.1| GENE 123 111775 - 112977 1538 400 aa, chain + ## HITS:1 COG:nupC KEGG:ns NR:ns ## COG: nupC COG1972 # Protein_GI_number: 16130325 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli K12 # 1 400 1 400 400 653 100.0 0 MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLAWFFLNSDVGLGFVKGF SEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFISALIGILQHIRVLPVIIRA IGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKISRNRMYTMAATAMSTVSMS IVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVDASEENIQMSNLHEGQSFFEMLG EYILAGFKVAIIVAAMLIGFIALIAALNALFATVTGWFGYSISFQGILGYIFYPIAWVMG VPSSEALQVGSIMATKLVSNEFVAMMDLQKIASTLSPRAEGIISVFLVSFANFSSIGIIA GAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLSASIAALVL >gi|296918691|gb|GG773009.1| GENE 124 113049 - 115238 1437 729 aa, chain - ## HITS:1 COG:yfeA_3 KEGG:ns NR:ns ## COG: yfeA_3 COG2200 # Protein_GI_number: 16130327 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 472 729 1 258 258 518 99.0 1e-146 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRLISPLAVIHSNYIFLAWMPLCVMLSILFIFG WRGVVPILCGMFCTNLWNLHLSFLQTAVMIGSQAFAVLCACAILRWQLGTRWRYGLTSRY VWQRLFWLGLVAPIGIKCSMYLVGNFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN MLFYYLTRMIVSPHFAQILWRRDIAPSLSKEKRAFTLSWLAALSVLLLLMCTPYENDFIA GYLVPVFFIIFTLGVGKIRYPFLNLTWAVSTLCLLNYNQNFLQGVLTEYSLAFILAVLIS FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL EFMSRHYGLIMRVHCIRSIYRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY YISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETPQQQALLHKLGVQYLQGYL IGRPQPLAD >gi|296918691|gb|GG773009.1| GENE 125 115856 - 116215 342 119 aa, chain + ## HITS:1 COG:no KEGG:SDY_2596 NR:ns ## KEGG: SDY_2596 # Name: yfeC # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 119 1 119 119 216 100.0 2e-55 MFKERMTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK >gi|296918691|gb|GG773009.1| GENE 126 116238 - 116609 210 123 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2591 NR:ns ## KEGG: ECS88_2591 # Name: yfeD # Def: nucleic acid-binding transcriptional regulator # Organism: E.coli_S88 # Pathway: not_defined # 1 123 8 130 130 244 100.0 6e-64 MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHN TPMLLEAEEPLAEYAPGIRTPAYRQIISAIDNMTHSEQEKVAQFLSREGIRNFLARLDID ESA >gi|296918691|gb|GG773009.1| GENE 127 116660 - 118075 1652 471 aa, chain - ## HITS:1 COG:ECs3278 KEGG:ns NR:ns ## COG: ECs3278 COG0008 # Protein_GI_number: 15832532 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli O157:H7 # 1 471 1 471 471 978 99.0 0 MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDTDLERSTPEAIEAIMDG MNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSKERLEALREEQMAKGEKPR YDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPIEFSNQELDDLIIRRTDGSPT YNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALKAPVPVYAHVSMINGDDGKKLSK RHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFTREEMIKYFTLNAVSKSASAFNT DKLLWLNHHYINALPPEYVATHLQWHIEQENIDTRNGPQLADLVKLLGERCKTLKEMAQS CRYFYEDFAEFDADAAKKHLRPVARQPLEVVRDKLTAITDWTAENVHHAIQATADELEVG MGKVGMPLRVAVTGAGQSPALDVTVHAIGKTRSIERINKALAFIAERENQH >gi|296918691|gb|GG773009.1| GENE 128 118721 - 119605 489 294 aa, chain - ## HITS:1 COG:xapR KEGG:ns NR:ns ## COG: xapR COG0583 # Protein_GI_number: 16130331 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 294 1 294 294 557 98.0 1e-159 MERVYRTDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKELENQLGTQLFIRHSRS VVLTHAGKILMEESRRLLVNANNVLARVEQIGRGEAGRIELGVVGTAMWGRMRPVMRRFL RENPNVEVLFREKMPAMQMALLERRELDAGIWRMATEPPTGFTSLRLHESAFLVAMPEEH HLSSFSTVPLEALRDEYFVTMPPVYTDWDFLQRVCQQVGFSPVVIREVNEPQTVLAMVSM GIGITLIADSYAQMNWPGVIFRPLKERIPADLYIVYETQQVTPALVKLLAALAQ >gi|296918691|gb|GG773009.1| GENE 129 119646 - 119804 103 52 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_2559 NR:ns ## KEGG: EcSMS35_2559 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 52 1 52 52 69 100.0 3e-11 MKDILFSSGVGFGIGALFTIVRLPIPVPNVLPGILSIVFMYVGYLVVKYFMP >gi|296918691|gb|GG773009.1| GENE 130 119857 - 121113 952 418 aa, chain - ## HITS:1 COG:xapB KEGG:ns NR:ns ## COG: xapB COG0477 # Protein_GI_number: 16130332 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 418 1 418 418 697 98.0 0 MSIALRLKVMSFLQYFIWGSWLVTLGSYMINTLHFTGANVGMVYSSKGIAAIIMPGIMGI IADKWLRAERAYMLCHLVCAGVLFYAASVTDPDMMFWVMLVNAMAFMPTIALSNSVSYSC LAQAGLDPVTAFPPIRVFGTVGFIVAMWAVSLLHLELSSLQLYIASGASLLLSAYALTLP KIPVAEKKATTSLASKLGLDAFVLFKNPRMAIFFLFAMMLGAVLQITNVFGNPFLHDFAR NPEFADSFVVKYPSILLSVSQMAEVGFILTIPFFLKRFGIKTVMLMSMVAWTLRFGFFAY GDPSPTGFILLLLSMIVYGCAFDFFNISGSVFVEQEVDSSIRASAQGLFMTMVNGVGAWV GSILSGMAVDYFSVDGVKDWHTIWLMFAGYALFLAVIFFFGFKYNHDPEKITHRSVTH >gi|296918691|gb|GG773009.1| GENE 131 121174 - 122007 863 277 aa, chain - ## HITS:1 COG:xapA KEGG:ns NR:ns ## COG: xapA COG0005 # Protein_GI_number: 16130333 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Escherichia coli K12 # 1 277 1 277 277 550 97.0 1e-156 MYQAQFSHNPLYCVDIIKTYKPDFTPRVAFILGSGLGALADQIENAVAISYEKLPGFPVS TVHGHAGELVLGYLQGVPVACMKGRGHFYEGRGMTIMTDAIRTFKLLGCELLFCTNAAGS LRPEVGAGSLVALKDHINTMPGTPMVGLNDERFGERFFSLANAYDAEYRALLQKVAKEEG FPLTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVVPEVISARHCELKVVAVSAITNM AEGLSDVKLSHAQTLAAAELSKQNFINLICGFLRKIA >gi|296918691|gb|GG773009.1| GENE 132 122256 - 123020 689 254 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2597 NR:ns ## KEGG: ECS88_2597 # Name: yfeN # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 254 1 254 254 452 100.0 1e-126 MKKHLFTLTLSSVLAIPAVSHAEFKGGFADIGIHYLDWTSRTTEKSSTKSHKDDFGYLEL EGGANFSWGEMYGFFDWENFYNDRHDKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYG SANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTYYTGDNGYVAGWVAGYSFMLG SEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED FYQDAIIYSIKFNF >gi|296918691|gb|GG773009.1| GENE 133 123059 - 123985 590 308 aa, chain - ## HITS:1 COG:yfeR KEGG:ns NR:ns ## COG: yfeR COG0583 # Protein_GI_number: 16130335 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 308 1 308 308 573 99.0 1e-163 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRCYP DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR EGDPLYQI >gi|296918691|gb|GG773009.1| GENE 134 124075 - 125073 715 332 aa, chain + ## HITS:1 COG:ECs3282 KEGG:ns NR:ns ## COG: ECs3282 COG0385 # Protein_GI_number: 15832536 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Escherichia coli O157:H7 # 1 332 1 332 332 592 100.0 1e-169 MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIALLFFMHGAKLSREAIIA GGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGFLYLCILPATVQSAIAFTS MAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGSLEQVGKIMLQLLLPFVLGHL SRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVNGIWHKVGWGSLLFIVVVSCVLL AIVIVVNVFMARRLGFNKADEITIVFCGSKKSLANGIPMANILFPTSVIGMMVLPLMIFH QIQLMVCAVLARRYKRQTEQLQAQQESSADKA >gi|296918691|gb|GG773009.1| GENE 135 125070 - 125288 276 72 aa, chain - ## HITS:1 COG:Z3676 KEGG:ns NR:ns ## COG: Z3676 COG3530 # Protein_GI_number: 15802943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 72 1 72 72 123 100.0 9e-29 MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGKLGELMQITLLIKTEG LTQLVQPLKRPL >gi|296918691|gb|GG773009.1| GENE 136 125290 - 127305 2148 671 aa, chain - ## HITS:1 COG:lig KEGG:ns NR:ns ## COG: lig COG0272 # Protein_GI_number: 16130337 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli K12 # 1 671 1 671 671 1306 99.0 0 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSNEKVTWCCELKLDGLA VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL GRLMQFKAWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGVREVGEATAAGLAAYFGTLEALEA ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPEPIVINAEEIDSPFAG KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI DETEMLRLLGS >gi|296918691|gb|GG773009.1| GENE 137 127376 - 128371 736 331 aa, chain - ## HITS:1 COG:ZzipA KEGG:ns NR:ns ## COG: ZzipA COG3115 # Protein_GI_number: 15802945 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 EDL933 # 1 331 2 328 328 465 97.0 1e-131 MQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMKSKRDDDSYDEDVEDDE GVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPRQPVQQPPEAQVPPQHAPRP AQPVQQPVQQPAYQPQPEQPLQQPVSPQVASAPQPVHSAPQPAQQAFQPAEPVAAPQPEP VAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQAGFIFGDMNIYHRHLSPDG SGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYGDELQNFKLMLQSAQHIADEVG GVVLDDQRRMMTPQKLREYQDIIREVKDANA >gi|296918691|gb|GG773009.1| GENE 138 128730 - 129365 573 211 aa, chain + ## HITS:1 COG:ECs3285 KEGG:ns NR:ns ## COG: ECs3285 COG2981 # Protein_GI_number: 15832539 # Func_class: E Amino acid transport and metabolism # Function: Uncharacterized protein involved in cysteine biosynthesis # Organism: Escherichia coli O157:H7 # 1 211 43 253 253 383 100.0 1e-106 MGGAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYFIPGI GQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSLFTMI PLLNLFIMPVAVCGATAMWVDCYRDKHAMWR >gi|296918691|gb|GG773009.1| GENE 139 129550 - 130521 702 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 312 3 304 308 275 49 2e-72 MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK PGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGM KGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGG TLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLD LKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILP SSGERYLSTALFADLFTEKELQQ >gi|296918691|gb|GG773009.1| GENE 140 130905 - 131162 353 85 aa, chain + ## HITS:1 COG:ECs3287 KEGG:ns NR:ns ## COG: ECs3287 COG1925 # Protein_GI_number: 15832541 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 85 1 85 85 129 100.0 2e-30 MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTV VTISAEGEDEQKAVEHLVKLMAELE >gi|296918691|gb|GG773009.1| GENE 141 131207 - 132934 1861 575 aa, chain + ## HITS:1 COG:ECs3288 KEGG:ns NR:ns ## COG: ECs3288 COG1080 # Protein_GI_number: 15832542 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli O157:H7 # 1 575 1 575 575 1043 99.0 0 MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFLSGRAKASAQLETIKTK AGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQASALEELDD EYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFI TDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVNPTNEVIDKMR AVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFL FMDRDTLPTEEEQFAAYKAVAEACGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAI RIAMDRKEILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAF DESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPS VLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNT NFEDAKVLAEQALAQPTTDELMTLVNKFIEEKTIC >gi|296918691|gb|GG773009.1| GENE 142 132975 - 133484 665 169 aa, chain + ## HITS:1 COG:crr KEGG:ns NR:ns ## COG: crr COG2190 # Protein_GI_number: 16130343 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Escherichia coli K12 # 1 169 1 169 169 285 100.0 4e-77 MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKM VAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTV IEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRIKK >gi|296918691|gb|GG773009.1| GENE 143 133546 - 134397 866 283 aa, chain - ## HITS:1 COG:pdxK KEGG:ns NR:ns ## COG: pdxK COG2240 # Protein_GI_number: 16130344 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Escherichia coli K12 # 1 283 1 283 283 552 98.0 1e-157 MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHY DTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDL LIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKDCRDLDSAIAA AKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNVISHSRVKTDLKGTGDLFCAQLI SGLLKGKALTDAVHRAGLRVLEVMRYTQQHESDELILPPLAEA >gi|296918691|gb|GG773009.1| GENE 144 134502 - 134870 338 122 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2609 NR:ns ## KEGG: ECS88_2609 # Name: yfeK # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 122 1 122 122 235 100.0 5e-61 MKKIVCLVVTLLMTLPAYAKLTAHEEARINAMLEGLAQKKDLIFVRNGDEHTCDEAVSHL RLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKMPGKSDENAQPFLHALIAQTDKTVP AQ >gi|296918691|gb|GG773009.1| GENE 145 134873 - 135787 564 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 293 3 304 308 221 40 2e-56 IVSTLEQTIGNTPLVKLQRMAPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIK PGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGM EGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTI TGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPAEYLPGIFNASLVDEVLDIHQRDAEN TMRELAVREGIFCGVSSGGAVAGALRVAKANPGAVVVAIICDRGDRYLSTGVFGEEHFSQ GAGI >gi|296918691|gb|GG773009.1| GENE 146 135919 - 137016 1291 365 aa, chain - ## HITS:1 COG:cysA KEGG:ns NR:ns ## COG: cysA COG1118 # Protein_GI_number: 16130348 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Escherichia coli K12 # 1 365 1 365 365 719 99.0 0 MSIEIANIKKSFGRTRVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIR FHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKL LEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLR QLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGEV NRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDISRRTSLDSPLPVQVLEAS PKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGDRLYVGLQHARLYNGDERIETRDEELA LAQSA >gi|296918691|gb|GG773009.1| GENE 147 137006 - 137881 1150 291 aa, chain - ## HITS:1 COG:cysWm KEGG:ns NR:ns ## COG: cysWm COG4208 # Protein_GI_number: 16132224 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Escherichia coli K12 # 1 291 1 291 291 538 100.0 1e-153 MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQAFSKGLMPVLQNLADP DMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLV YLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAA ILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE LLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKRAQQEEHHEH >gi|296918691|gb|GG773009.1| GENE 148 137881 - 138714 1067 277 aa, chain - ## HITS:1 COG:cysU KEGG:ns NR:ns ## COG: cysU COG0555 # Protein_GI_number: 16130349 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Escherichia coli K12 # 1 277 1 277 277 433 99.0 1e-121 MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWEVITNPQVVAAY KVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFS VNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGAT RWQSFRKVVLPELSPALVAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEF DYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH >gi|296918691|gb|GG773009.1| GENE 149 138714 - 139730 1317 338 aa, chain - ## HITS:1 COG:ECs3296 KEGG:ns NR:ns ## COG: ECs3296 COG4150 # Protein_GI_number: 15832550 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 337 1 337 338 645 99.0 0 MAVNLLKKNSLVLVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKL TIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYS TMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKAKT EQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKF PQTELFRVEDKFGSWTEVMKTHFTSGGELDKLLAAGRK >gi|296918691|gb|GG773009.1| GENE 150 139888 - 140679 248 263 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 251 4 238 242 100 30 9e-20 MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVV ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNV TKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRV NAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESS YLTGTQNVIDGGSTLPETVSVGI >gi|296918691|gb|GG773009.1| GENE 151 140959 - 141855 894 298 aa, chain + ## HITS:1 COG:ECs3299 KEGG:ns NR:ns ## COG: ECs3299 COG2103 # Protein_GI_number: 15832553 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Escherichia coli O157:H7 # 1 298 1 298 298 528 97.0 1e-150 MQLEKMITEGSNAASAEIDRVSTLEMCRIINDEDKTVPLAVERVLPDIAAAIDVIHTQVS GGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGGEYAIQHAVEGAEDSREGG VNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCRTVGISCNPGSAVSSTAEFAI TPVVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGKVFGNLMVDVVATNEKLHVRQVN IVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLDADEAKKCLDQHGGFIRKALEKE >gi|296918691|gb|GG773009.1| GENE 152 141859 - 143283 1419 474 aa, chain + ## HITS:1 COG:yfeV_2 KEGG:ns NR:ns ## COG: yfeV_2 COG1263 # Protein_GI_number: 16130354 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 101 474 1 374 374 645 98.0 0 MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVDPDIKTLEGVKGVILTS DQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQLKARQTSGVQQFLAKFATI FTPLIPGFIAAGLLLGIATLIATVMHVTADAQGTLPDALNFMKVFSKGLFTFLVILVGYN AAQAFGGTGVNGAIIAALFLLGYNPTATTGYYAGFHDFFGLPIDPRGNIIGVLIAAWACA RIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIMPLGGWLFEGMSWLFMHLNSNPLGC AVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNSLFPILSMAGAGQVGAALALYWRAQPH SALRSQVRGAIIPGLLGVGEPLIYGVTLPRMKPFVTACLGGAAGGLFIGLIAWWGLPMGL NSAFGPSGLVALPLMTSAQGILPAMAVYAGGILVAWVSGFIFTTLFGCRNVNLD >gi|296918691|gb|GG773009.1| GENE 153 143461 - 144360 1193 299 aa, chain - ## HITS:1 COG:yfeX KEGG:ns NR:ns ## COG: yfeX COG2837 # Protein_GI_number: 16130356 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Escherichia coli K12 # 1 299 10 308 308 615 99.0 1e-176 MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFG NNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDC IEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNL KQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTA SGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL >gi|296918691|gb|GG773009.1| GENE 154 144456 - 145031 431 191 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_2587 NR:ns ## KEGG: EcSMS35_2587 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 191 1 191 191 377 100.0 1e-103 MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAI ADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGV KIGTPFSDLYSKAFGNCQKADSDDNRAVECKAEGSQHISYQFSGEWSGPEGLMPSDDTLK NWKVSKIIWRR >gi|296918691|gb|GG773009.1| GENE 155 145092 - 145541 319 149 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2766 NR:ns ## KEGG: UTI89_C2766 # Name: yfeZ # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 149 3 151 151 239 100.0 2e-62 MKSTEFYPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN FWLGLIPGIPAVLAFLLSGRRASFPRIWHVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG LALVVADIVALIWLLTNRRLRACFNEEKE >gi|296918691|gb|GG773009.1| GENE 156 145528 - 145953 536 141 aa, chain - ## HITS:1 COG:ECs3305 KEGG:ns NR:ns ## COG: ECs3305 COG0456 # Protein_GI_number: 15832559 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Escherichia coli O157:H7 # 1 141 38 178 178 293 100.0 7e-80 MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMG GYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYER LGYEHADVLSLGKRLIEDEEY >gi|296918691|gb|GG773009.1| GENE 157 146167 - 147036 784 289 aa, chain + ## HITS:1 COG:ECs3306 KEGG:ns NR:ns ## COG: ECs3306 COG0860 # Protein_GI_number: 15832560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 530 98.0 1e-151 MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKEEPLKTSNGHSKPKAKKSGGRRVVV LDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARLTRSGDTFIPLYDRVEI AHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMAKYLSERENRADEVAGKKATD KDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVVLKSPSVPSVL VETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQKAHSRKR >gi|296918691|gb|GG773009.1| GENE 158 147040 - 147939 756 299 aa, chain + ## HITS:1 COG:hemF KEGG:ns NR:ns ## COG: hemF COG0408 # Protein_GI_number: 16130361 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase # Organism: Escherichia coli K12 # 1 299 1 299 299 617 98.0 1e-177 MKPDAHQVKQFLLNLQDTICQQLSAVDGAEFVEDSWQREAGGGGRSRVLRNGGVFEQAGV NFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYVPTSHANVRFFIAEKPGAE PVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDEYFYLKHRNEQR GIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRGRY VEFNLVWDRGTLFGLQTGGRPESILMSMPPLVRWEYDYQPKDGSPEAALSEFIKVRDWV >gi|296918691|gb|GG773009.1| GENE 159 147945 - 148997 971 350 aa, chain - ## HITS:1 COG:ECs3308 KEGG:ns NR:ns ## COG: ECs3308 COG2207 # Protein_GI_number: 15832562 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 350 1 350 350 711 100.0 0 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRSQSALEVKEQHKA ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRR LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE LISPWSQSTTVKDAAMQWGFWHLGQFATDYQQLFAEKPSLTLHQRMREWG >gi|296918691|gb|GG773009.1| GENE 160 149043 - 149543 421 166 aa, chain - ## HITS:1 COG:ECs3309 KEGG:ns NR:ns ## COG: ECs3309 COG4577 # Protein_GI_number: 15832563 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli O157:H7 # 1 166 3 168 168 288 99.0 3e-78 MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAG CAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVKEPDAPVIVAESADELLALLTS VRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSRYRLKPH >gi|296918691|gb|GG773009.1| GENE 161 149556 - 150215 713 219 aa, chain - ## HITS:1 COG:ECs3310 KEGG:ns NR:ns ## COG: ECs3310 COG4816 # Protein_GI_number: 15832564 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 371 98.0 1e-103 MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVANIENGAAFQWANDAE NTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLVTYVPPP SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA >gi|296918691|gb|GG773009.1| GENE 162 150225 - 151112 1089 295 aa, chain - ## HITS:1 COG:eutC KEGG:ns NR:ns ## COG: eutC COG4302 # Protein_GI_number: 16130365 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, small subunit # Organism: Escherichia coli K12 # 1 295 1 295 295 555 100.0 1e-158 MDQKQIEEIVRSVMASMGQAAPAPSEAKCATTNCAAPVTSESCALDLGSAEAKAWIGVEN PHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGL LEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEE ILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSC YAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR >gi|296918691|gb|GG773009.1| GENE 163 151133 - 152494 1562 453 aa, chain - ## HITS:1 COG:eutB KEGG:ns NR:ns ## COG: eutB COG4303 # Protein_GI_number: 16130366 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, large subunit # Organism: Escherichia coli K12 # 1 453 15 467 467 921 99.0 0 MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQERVAAKQVLSEMTVADIR NNPVIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVLSDETSVDDIAFTRKGLTSE VVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSARLQPNDTRDDVQSIAAQIYEG LSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHVTTQIEAIRRGAP GGLIFQSICGSEKGLKEFGVELAMLAEARAVGAEFNRIAGENCLYFETGQGSALSAGANF GADQVTMEARNYGLARHYDPFIVNTVVGFIGPEYLYNDRQIIRAGLEDHFMGKLSGISMG CDCCYTNHADADQNLNENLMILLATAGCNYIMGMPLGDDIMLNYQTTAFHDTATVRQLLN LRPSPEFERWLESMGIMANGRLTKRAGDPSLFF >gi|296918691|gb|GG773009.1| GENE 164 152506 - 153909 1311 467 aa, chain - ## HITS:1 COG:ECs3313 KEGG:ns NR:ns ## COG: ECs3313 COG4819 # Protein_GI_number: 15832567 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition # Organism: Escherichia coli O157:H7 # 1 467 1 467 467 885 99.0 0 MNTRQLLSVGIDIGTTTTQVIFSHLELVNRAAVSQVPRYEFIKREISWQSPVFFTPVDKQ GGLKEAELKTLILEQYQAAGIAPESVDSGAIIITGESAKTRNARPAVMALSRSLGDFVVA SAGPHLESVIAGHGAGAQTLSEQRLCRVLNIDIGGGTANYALFDAGKISGTACLNVGGRL LETDSQGRVVYAHKPGQMIVDECFGAGTDARSLTGAQLVQVTRRMAELIVEVIDGTLSPL AQALMQTGLLPAGVTPEIITLSGGVGECYRHQPADPFCFADIGPLLATALHDHPRLREMN VQFPAQTVRATVIGAGAHTLSLSGSTIWLEGVQLPLRNLPVAIPIDETDLVSAWQQALIQ LDLCPKTDAYVLALPASLPVRYAAVLTVINALVDFVARFPNPHPLLVVAGQDFGKALGML LRPQLQQLPLAVIDEVIVRAGDYIDIGTPLFGGSVVPVTVKSLAFPS >gi|296918691|gb|GG773009.1| GENE 165 153906 - 155132 1627 408 aa, chain - ## HITS:1 COG:eutH KEGG:ns NR:ns ## COG: eutH COG3192 # Protein_GI_number: 16130377 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli K12 # 1 408 1 408 408 657 99.0 0 MGINEIIMYIMMFFMLIAAVDRILSQFGGSARFLGKFGKSIEGSGGQFEEGFMAMGALGL AMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACDMGGFFLAKELAGGDVAAW LYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLAGIVTIPIGCIAGGLVAMYSG VQINGQPVEFTFALILMNMIPVLIVAVLVALGLKFIPEKMINGFQIFAKFLVALITLGLA AAVVKFLLGWELIPGLDPIFMAPGDKPGEVMRAIEVIGSISCVLLGAYPMVLLLTRWFEK PLMSVGNVLNMNNIAAAGMVATLANNIPMFGMMKQMDTRGKVINCAFAVSAAFALGDHLG FAAANMNAMIFPMIVGKLIGGVTAIGVAMMLVPKEDATAAKTEAEAQS >gi|296918691|gb|GG773009.1| GENE 166 155349 - 156536 1147 395 aa, chain - ## HITS:1 COG:eutG KEGG:ns NR:ns ## COG: eutG COG1454 # Protein_GI_number: 16130378 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli K12 # 1 395 10 404 404 716 98.0 0 MQSELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGAVSSCGQQAQTRGLKHLFVMADSFL HQAGMTAGLTRSLAVKGIAMTLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLD AAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGTGSETTNVTVIIDAVSGRKQV LAHASLMPDVAILDAALTEGVPSHVTAMTGIDALTHAIEAYSALNATPFTDSLAIGAIAM IGKSLPKAVGYGHDLAARESMLLASCMAGMAFSSAGLGLCHAMAHQPGAALHIPHGLANA MLLPTVMEFNRMVCRDRFSQIGRALRTKKSDDRDAINAVSELIAEVGIGKRLGDVGATSA HYGAWAQAALEDICLRSNPRTASLEQIVGLYAAAQ >gi|296918691|gb|GG773009.1| GENE 167 156526 - 157362 884 278 aa, chain - ## HITS:1 COG:eutJ KEGG:ns NR:ns ## COG: eutJ COG4820 # Protein_GI_number: 16130379 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin # Organism: Escherichia coli K12 # 1 278 1 278 278 556 98.0 1e-158 MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWA DVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPPGTDPRISINVLESAGLEV SHVLDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKKGKVTYSADEATGGHHISLTLAGNR RISLEEAEQYKRGHGDEIWPAVKPVYEKMADIVARHIEGQGITDLWLAGGSCMQPGVAAL FCKQFPALQVHLPQHSLFMTPLAIASSGREKAEGIYAK >gi|296918691|gb|GG773009.1| GENE 168 157373 - 158776 838 467 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 1 454 1 461 477 327 40 3e-88 MNQQDIEQVVKAVLLKMQSSDTPPAAVHEMGVFASLDDAVAAAKVAQQGLKSVAMRQLAI AAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTPGVECLSPQVLTGDNGLTL IENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAPHPAAKKVSQRAITLLNQAIV AAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGEAVVEAARKHTNKRLIAAGAGNP PVVVDETADLARAAQSIVKGASFDNNIICADEKVLIVVDSVADELMRLMEGQHAVKLTAE QAQQLQPVLLKNIDERGKGTVSRDWVGRDAAKIAAAIGLKVPEQTRLLFVETTAEHPFAV TELMMPVLPVVRVANVADAIALAVKLEGGCHHTAAMHSRNIENMNQMANAIDTSIFVKNG PCIAGLGLGGEGWTTMTITTPTGEGVTSARTFVRLRRCVLVDAFRIV >gi|296918691|gb|GG773009.1| GENE 169 158788 - 159075 239 95 aa, chain - ## HITS:1 COG:cchB KEGG:ns NR:ns ## COG: cchB COG4576 # Protein_GI_number: 16130381 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli K12 # 1 95 1 95 95 176 100.0 9e-45 MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAIDNIGAGTGEWVLLVSG SSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK >gi|296918691|gb|GG773009.1| GENE 170 159182 - 159475 441 97 aa, chain - ## HITS:1 COG:ECs3319 KEGG:ns NR:ns ## COG: ECs3319 COG4577 # Protein_GI_number: 15832573 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli O157:H7 # 1 97 15 111 111 153 100.0 9e-38 MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGA AAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL >gi|296918691|gb|GG773009.1| GENE 171 159514 - 160530 904 338 aa, chain - ## HITS:1 COG:eutI KEGG:ns NR:ns ## COG: eutI COG0280 # Protein_GI_number: 16130383 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Escherichia coli K12 # 1 338 1 338 338 622 99.0 1e-178 MIIKRCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGV AMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCI AGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGPALGFADCSVVPQPTAAQLAD IALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQF DAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPM HDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQTLVE >gi|296918691|gb|GG773009.1| GENE 172 160527 - 161330 833 267 aa, chain - ## HITS:1 COG:eutT KEGG:ns NR:ns ## COG: eutT COG4812 # Protein_GI_number: 16130384 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization cobalamin adenosyltransferase # Organism: Escherichia coli K12 # 1 267 1 267 267 501 99.0 1e-142 MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLRIKFIDEQGRLFVDDEQ QQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKMVAKSDPRLAFRAVLDSTI ALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLACQAIVGLSDEDLHRLSHQPLR YLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVFITRSFEVLRPDILQALNRLSST VYVMMILSVTKQPLTVKQIQQRLGETQ >gi|296918691|gb|GG773009.1| GENE 173 161327 - 162028 729 233 aa, chain - ## HITS:1 COG:ECs3322 KEGG:ns NR:ns ## COG: ECs3322 COG4766 # Protein_GI_number: 15832576 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 233 1 233 233 445 97.0 1e-125 MKKLITANDIREAHARGELAMSVVLRASIITPEAREMADLLGFTITECDESIPVTASVPA SASADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQSLEQGALQPSFKSVTGKG GIKVIDGSSVKFGRFDGAQPHCVGLTDLVTGDDGSSMAAGFMQWENAFFPWTLNYDEIDM VLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGTTSSVKFLYVAWPANWQSL >gi|296918691|gb|GG773009.1| GENE 174 162003 - 162482 369 159 aa, chain - ## HITS:1 COG:ECs3323 KEGG:ns NR:ns ## COG: ECs3323 COG4917 # Protein_GI_number: 15832577 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 314 99.0 3e-86 MKRIAFVGTVGAGKTTLFNALQGNYTLARKTQAVEFNDNGDIDTPGEYFSHPRWYHALIT TLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTDMPDADVAATRKLLLETGF EEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE >gi|296918691|gb|GG773009.1| GENE 175 162495 - 162830 403 111 aa, chain - ## HITS:1 COG:ECs3324 KEGG:ns NR:ns ## COG: ECs3324 COG4810 # Protein_GI_number: 15832578 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 111 25 135 135 209 99.0 1e-54 MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLAL KAAGVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLNYTLCEMTKS >gi|296918691|gb|GG773009.1| GENE 176 163149 - 165428 2685 759 aa, chain - ## HITS:1 COG:maeB_1 KEGG:ns NR:ns ## COG: maeB_1 COG0281 # Protein_GI_number: 16130388 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Escherichia coli K12 # 1 434 1 434 434 849 100.0 0 MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLKAYKY TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFI EVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRV VEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAAY AVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKKMARAPMILALANPEPEILPPLAKE VRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDVGATAINEEMKLAAVRAIAELAHAEQS EVVASAYGDQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMESGVATRPIADFDVYIDKL TEFVYKTNLFMKPIFSQARKAPKRVVLPEGEEARVLHATQELVTLGLAKPILIGRPNVIE MRIQKLGLQIKSGVDFEIVNNESDPRFKEYWTEYFQIMKRRGVTQEQAQRALISNPTVIG AIMVQRGEADAMICGTVGDYHEHFSVVKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYV NDEPDAEELAEITLMAAETVRRFGIEPRVALLSHSNFGSSDCPSSSKMRQALELVRERAP ELMIDGEMHGDAALVEAIRNDRMPDSPLKGSANILVMPNMEAARISYNLLRVSSSEGVTV GPVLMGVAKPVHVLTPIASVRRIVNMVALAVVEAQTQPL >gi|296918691|gb|GG773009.1| GENE 177 165717 - 166667 865 316 aa, chain + ## HITS:1 COG:ECs3326 KEGG:ns NR:ns ## COG: ECs3326 COG0176 # Protein_GI_number: 15832580 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 633 99.0 0 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLSQYEHLIDDAIAWGKK NGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSFDKEKSIEKARHLVDLYQQ QGVEKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGR IYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYETIVMGASFRRTEQILALTGCDR LTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPVSEAEFRWEHNQDAMAVEKLSEGIRL FAVDQRKLEDLLAAKL >gi|296918691|gb|GG773009.1| GENE 178 166687 - 168690 2433 667 aa, chain + ## HITS:1 COG:tktB KEGG:ns NR:ns ## COG: tktB COG0021 # Protein_GI_number: 16130390 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Escherichia coli K12 # 1 667 1 667 667 1356 99.0 0 MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFI LSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLA NAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEGISHEVCSLAGTLGLGKLIGF YDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSVKDKPSLI ICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKEIYHAWNAREKGE KAQQRWNEKFAAYKKAHPQLAEEFTRRMSGGLPKDWEKTTQKYINELQANPAKIATRKAS QNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSLKEDPAGNYIHYGVREFGMTAIANGI AHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLAS LRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPDQVKEIARGGY VLKDSGGKPDIILIATGSEMEITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVL PSNVSARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPADKLFPFFGFTAENIVAKAHK VLGVKGA >gi|296918691|gb|GG773009.1| GENE 179 168767 - 169765 596 332 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2645 NR:ns ## KEGG: ECS88_2645 # Name: ypfG # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 332 16 347 347 660 100.0 0 MSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGL KSPDASEGEIAPRMLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQMIQEGRAITLRD GNQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPL SLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIV SRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRF DGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR >gi|296918691|gb|GG773009.1| GENE 180 169936 - 170511 631 191 aa, chain - ## HITS:1 COG:ECs3329 KEGG:ns NR:ns ## COG: ECs3329 COG0494 # Protein_GI_number: 15832583 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 370 98.0 1e-103 MTQQITLVKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNAKKKTV VLIRQFRVATWVNGNESGQLIETCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELYM SPGGVTELIHFFIAEYSDSQRANAGGGVEDEDIEVLELPFSQALEMIKTGEIRDGKTVLL LNYLQMSHLMD >gi|296918691|gb|GG773009.1| GENE 181 170579 - 172558 1444 659 aa, chain - ## HITS:1 COG:aegA_2 KEGG:ns NR:ns ## COG: aegA_2 COG0493 # Protein_GI_number: 16130393 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 181 659 1 479 479 991 99.0 0 MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCE DAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHK CDLCAGRENGPACVENCPADALQLVTDAALSGMAKSRRLRTARQEQQPWHASTAAQEMPV MSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTC PLHNHIPQWIELVKAGNIDAAVELSHQTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTI GNIERYISDQALAKGWRPDLSHVTKVDKRVAIIGAGPAGLACADVLTRNGVEVTVYDRHP EIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLNSLLEQYDAVFVGV GTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTA MDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHV CGIRFLRTRLGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKW GRIIADVESQYRYQTTNPKIFAGGDAVCGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH >gi|296918691|gb|GG773009.1| GENE 182 172764 - 174464 1342 566 aa, chain + ## HITS:1 COG:narQ KEGG:ns NR:ns ## COG: narQ COG3850 # Protein_GI_number: 16130394 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Escherichia coli K12 # 1 566 1 566 566 1079 99.0 0 MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDL QSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPW YQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPL NQLVTASQRIEHGQFDSPPLDTSLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDL HEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGDNWRISEGQPNP ELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQKHFQQLLLME ERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQSIMADFSQALNDAYRQLRELL TTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTLALDAQMQVHLLQIIREAVLN AMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLT FSQPSGGGTLVSISFRSAEGEESQLM >gi|296918691|gb|GG773009.1| GENE 183 174628 - 177741 3267 1037 aa, chain + ## HITS:1 COG:acrD KEGG:ns NR:ns ## COG: acrD COG0841 # Protein_GI_number: 16130395 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1037 1 1037 1037 2036 99.0 0 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENT VTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQ AVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQDPLSRVNGVGDIDAYGS QYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL QTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEM ATAELVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQ NFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAIVVVENVERIM SEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL SVLVAMILTPALCATLLKPLKKGEHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRW IVIYVLLLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTH EKDNIMSVFATVGSGPGGNGQNVARMFIRLKDGSERDSKTGTSFAIIERATKAFNKIKEA RVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLD DSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRML PDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMD IMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVM LVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEA TLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVP LFFVLVRRRFPLKPRPE >gi|296918691|gb|GG773009.1| GENE 184 177919 - 178041 98 40 aa, chain + ## HITS:1 COG:no KEGG:ECP_2483 NR:ns ## KEGG: ECP_2483 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 40 36 75 75 64 97.0 1e-09 MGILRKQYTVVKLIYSIAAMTTSGGQTLCKYYGPAVMICM >gi|296918691|gb|GG773009.1| GENE 185 178280 - 178636 303 118 aa, chain + ## HITS:1 COG:ECs3333 KEGG:ns NR:ns ## COG: ECs3333 COG1393 # Protein_GI_number: 15832587 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli O157:H7 # 1 118 1 118 118 238 95.0 2e-63 MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDNELLNGFINELGWEALLNTRGT TWRKLDETTRNKITDAASAATLMTEMPAIIKRPLLCAPGKPMLLGFSESSYQQFFHEV >gi|296918691|gb|GG773009.1| GENE 186 178640 - 179767 1084 375 aa, chain + ## HITS:1 COG:dapE KEGG:ns NR:ns ## COG: dapE COG0624 # Protein_GI_number: 16130397 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli K12 # 1 375 1 375 375 777 99.0 0 MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGET LAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPN HTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGS LTCNLTIHGVQGHVAYPHLADNPVHRAAPFINELVAIEWDQGNEFFPATSMQIANIQAGT GSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKL VDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQ LLARMYQRIMEQLVA >gi|296918691|gb|GG773009.1| GENE 187 179795 - 179995 324 66 aa, chain + ## HITS:1 COG:no KEGG:G2583_2995 NR:ns ## KEGG: G2583_2995 # Name: ypfN # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 66 1 66 66 85 100.0 8e-16 MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPPHRDFNDKWDDDDDWPK KDQPKK >gi|296918691|gb|GG773009.1| GENE 188 180076 - 180774 805 232 aa, chain - ## HITS:1 COG:ECs3335 KEGG:ns NR:ns ## COG: ECs3335 COG0400 # Protein_GI_number: 15832589 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 232 9 240 240 443 98.0 1e-124 MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPLFPDALVVSVGGAEPSGNP AGRQGVSVQGITEDNRQARVNAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMALES IKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGD VTLDIVEDLGHAIDNRSMQLALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM >gi|296918691|gb|GG773009.1| GENE 189 180848 - 182824 1349 658 aa, chain - ## HITS:1 COG:ypfI KEGG:ns NR:ns ## COG: ypfI COG1444 # Protein_GI_number: 16130399 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase fused to an acetyltransferase # Organism: Escherichia coli K12 # 1 658 14 671 671 1243 95.0 0 MKREGIRRLLVLSGEERWCFDHALKLRDALPGDWLWISPQPDAENHCSPSALQTLLGREF RHAVFDARQGFDAAAFAALSGTLKAGSWLVLLLPVWDEWENQPDADSLRWSDCPDPIATP HFVQHFKRVLTANNDAILWRQNQPFSLAHFTPRTDWHPATGAPQPEQQQLLQQLLTMPPG VAAVTAARGRGKSALAGQLISRIAGSAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASD EQADWLVVDEAAAIPAPLLYQLVSRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFE LQQPIRWAQGCPLEKMVSEALVFDDENFTHTPQGNIVISAFEQTLWRSEPETPLKVYQLL SGAHYRTSPLDLRRMMDAPGQHFLQAAGENEIAGALWLVDEGGLSQELSQAVWAGFRRPR GNLVAQSLAAHGSNPLAATLRGRRVSRIAVHPARQREGTGQQLIAGALQYIHDLDYLSVS FGYTEELWRFWQRCGFVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQ ALAQWNGEMLPVDPLNDAVLSDDDWLELAGFAFTHRPLLTSLGCLLRLLQTSELALPALR GRLQKNASDAQLCTTLKLSGRKLLLVRQREEAAQALFVLDDVRTERLRDRITQWQFFH >gi|296918691|gb|GG773009.1| GENE 190 182878 - 183741 823 287 aa, chain - ## HITS:1 COG:ECs3337 KEGG:ns NR:ns ## COG: ECs3337 COG2321 # Protein_GI_number: 15832591 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 537 100.0 1e-152 MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTG QPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTG CGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFAQGYVIAHEVGHHVQKLLGIE PKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHSMQQQGVLETGDLEEALNAAQAIGD DRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI >gi|296918691|gb|GG773009.1| GENE 191 183951 - 184664 1146 237 aa, chain - ## HITS:1 COG:ECs3338 KEGG:ns NR:ns ## COG: ECs3338 COG0152 # Protein_GI_number: 15832592 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 464 100.0 1e-131 MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNYFIMSK LAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLVKRLGIEEGIELNPPLFDL FLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKANDVLKKLFDDAGLILVDFKLEF GLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSLGGLIEAYEAVARRLGVQLD >gi|296918691|gb|GG773009.1| GENE 192 184736 - 184966 90 76 aa, chain + ## HITS:1 COG:no KEGG:SDY_2665 NR:ns ## KEGG: SDY_2665 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 76 8 83 83 127 97.0 1e-28 MRRERLIRPTSDKQISCELPLKSRFSADAHVCVSYQKKGPDDSSPVFLLAKRSLEDSYQR VVLTLSQSMTFRIDEL >gi|296918691|gb|GG773009.1| GENE 193 184877 - 185911 908 344 aa, chain - ## HITS:1 COG:nlpB KEGG:ns NR:ns ## COG: nlpB COG3317 # Protein_GI_number: 16130402 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Escherichia coli K12 # 1 344 2 345 345 624 99.0 1e-178 MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPV TSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQV VSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLN LEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLP MLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSEWHELGASDPGLAS GDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK >gi|296918691|gb|GG773009.1| GENE 194 185928 - 186806 855 292 aa, chain - ## HITS:1 COG:ECs3340 KEGG:ns NR:ns ## COG: ECs3340 COG0329 # Protein_GI_number: 15832594 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 580 100.0 1e-165 MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVV MMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFK AIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIKEATGNLTRVNQIKELVSDD FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH NKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGLL >gi|296918691|gb|GG773009.1| GENE 195 186952 - 187524 346 190 aa, chain + ## HITS:1 COG:ECs3341 KEGG:ns NR:ns ## COG: ECs3341 COG2716 # Protein_GI_number: 15832595 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system regulatory protein # Organism: Escherichia coli O157:H7 # 1 190 23 212 212 374 99.0 1e-104 MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAMLGEEFTFIMLLSGSWNA ITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDVADSPHLIERFTALFDAHH MNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQAFKALCTELNAQGSINVVNY SQHDEQDGVK >gi|296918691|gb|GG773009.1| GENE 196 187524 - 187994 576 156 aa, chain + ## HITS:1 COG:ECs3342 KEGG:ns NR:ns ## COG: ECs3342 COG1225 # Protein_GI_number: 15832596 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 322 100.0 1e-88 MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDEL KKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIH RISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA >gi|296918691|gb|GG773009.1| GENE 197 188093 - 189154 1350 353 aa, chain - ## HITS:1 COG:ECs3355 KEGG:ns NR:ns ## COG: ECs3355 COG0628 # Protein_GI_number: 15832609 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 583 98.0 1e-166 MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQ SIGCSRPWATSIVLILFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRR YPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLLTIAVYLVLVPLMVFFLLKDK EQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYSL LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPVL FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQD >gi|296918691|gb|GG773009.1| GENE 198 189367 - 190830 1737 487 aa, chain + ## HITS:1 COG:yfgC KEGG:ns NR:ns ## COG: yfgC COG4783 # Protein_GI_number: 16130419 # Func_class: R General function prediction only # Function: Putative Zn-dependent protease, contains TPR repeats # Organism: Escherichia coli K12 # 1 487 1 487 487 870 99.0 0 MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQL RGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSAL FRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMA ALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPP EILLTHPLPESRLADARNRANQMRPIVVQSSEDFYLAKVRTLGMYNSGRNQLTSDLLDEW AKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKAN DAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAE AALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQER FKPYTKM >gi|296918691|gb|GG773009.1| GENE 199 190851 - 191210 484 119 aa, chain + ## HITS:1 COG:ECs3357 KEGG:ns NR:ns ## COG: ECs3357 COG1393 # Protein_GI_number: 15832611 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 202 98.0 2e-52 MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKMLGMNSAREL MRQKEDLYKELNLADSSLSEEVLIQAMVENPKLMERPIVVANGKARIGRPPEQVLEIVG >gi|296918691|gb|GG773009.1| GENE 200 191348 - 192025 620 225 aa, chain - ## HITS:1 COG:ECs3358 KEGG:ns NR:ns ## COG: ECs3358 COG0593 # Protein_GI_number: 15832612 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Escherichia coli O157:H7 # 1 225 24 248 248 447 99.0 1e-126 MPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELS QRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESG KTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPED VGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL >gi|296918691|gb|GG773009.1| GENE 201 192116 - 193405 1018 429 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 3 416 2 428 447 396 48 1e-109 MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFI CKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLF PPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFL AIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFAILTILPAALVVIA EHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRV YSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDY NKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKLISMLRPEEVVLD AEDADITDK >gi|296918691|gb|GG773009.1| GENE 202 193528 - 194154 878 208 aa, chain - ## HITS:1 COG:ECs3360 KEGG:ns NR:ns ## COG: ECs3360 COG0035 # Protein_GI_number: 15832614 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 208 10 217 217 394 100.0 1e-110 MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNGP VEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSN IDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYT ASIDQGLNEHGYIIPGLGDAGDKIFGTK >gi|296918691|gb|GG773009.1| GENE 203 194478 - 195515 1237 345 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 2 345 7 356 356 481 68 1e-134 MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGGFGALCALPQKYREPVL VSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVNTAS AVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKVSDGDV LIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPLADHLLAPTRIYVKSVLELIEKV DVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQWPEVFNWLQTAGNVERHEMYRTFNC GVGMIIALPAPEVDKALALLNANGENAWKIGIIKTSDSEQRVVIE >gi|296918691|gb|GG773009.1| GENE 204 195515 - 196153 649 212 aa, chain + ## HITS:1 COG:purN KEGG:ns NR:ns ## COG: purN COG0299 # Protein_GI_number: 16130425 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Escherichia coli K12 # 1 212 1 212 212 429 99.0 1e-120 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLITSA FDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHT HRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDTEDDITARVQTQEHAIYPLV ISWFADGRLKMHENAAWLDGQRLPPQGYAADE >gi|296918691|gb|GG773009.1| GENE 205 196325 - 198391 2123 688 aa, chain + ## HITS:1 COG:ECs3363 KEGG:ns NR:ns ## COG: ECs3363 COG0855 # Protein_GI_number: 15832617 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Escherichia coli O157:H7 # 1 688 1 688 688 1343 99.0 0 MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRR IIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEMARNQIFLINERQLSVNQQ NWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVEIIRGDTIRYALLEIPSDKVP RFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEME ASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVLREKLTISRYDSIVPGGRYHNFKDF INFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFDAIRERDVLLYYPYHTFEHVLELLRQA SFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTE AGVHVIFSAPGLKIHAKLFLISRKENGEVVRYAHIGTGNFNEKTARLYTDYSLLTADARI TNEVRRVFNFIENPYRPVTFDYLMVSPQNSRRLLYEMVDREIANAQQGLPSGITLKLNNL VDKGLVDRLYAASSSGVPVNLLVRGMCSLIPNLEGISDNIRAISIVDRYLEHDRVYIFEN GGDKKVYLSSADWMTRNIDYRIEVATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSN RYVPRGNRRKVRAQLAIYDYIKSLEQSE >gi|296918691|gb|GG773009.1| GENE 206 198396 - 199937 1426 513 aa, chain + ## HITS:1 COG:ECs3364 KEGG:ns NR:ns ## COG: ECs3364 COG0248 # Protein_GI_number: 15832618 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 1009 100.0 0 MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEE AMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNE EARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGG VINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPE RLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREG VLYEMEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLE ALLRWAAMLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKLDD LPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNA LVLLDLEKEQEYWEGVAGWRLKIEEESTPEIAA >gi|296918691|gb|GG773009.1| GENE 207 199976 - 202219 1446 747 aa, chain - ## HITS:1 COG:Z3766_3 KEGG:ns NR:ns ## COG: Z3766_3 COG2200 # Protein_GI_number: 15803026 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 EDL933 # 476 747 1 272 272 552 98.0 1e-157 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDSRL ISQRLFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFAIWLLALGALLLLLCMPLNEKSTI FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR RGAMYLQRELKDKVAMMNRLQRALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIS PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMRVVAEYVENEEIREAVLSLGID YMQGYLIGKPQPLIDTLNEIEPIRESA >gi|296918691|gb|GG773009.1| GENE 208 202436 - 202726 91 96 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2676 NR:ns ## KEGG: ECS88_2676 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 96 1 96 96 189 100.0 4e-47 MLSFFFALMVLPGTDGRVDKTAKEEDKADEQYDTGHATVKSVSFSHTGCLTHKRFLEVCP TPWTVLTLRHNRTKWSILRYVKKRQWIHILMLWKLI >gi|296918691|gb|GG773009.1| GENE 209 202571 - 202762 102 63 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_2653 NR:ns ## KEGG: EcSMS35_2653 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 63 1 63 63 94 100.0 1e-18 MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHHQSKKEAQQSTLSVESP VQR >gi|296918691|gb|GG773009.1| GENE 210 203076 - 203591 361 171 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2677 NR:ns ## KEGG: ECS88_2677 # Name: yfgH # Def: outer membrane lipoprotein # Organism: E.coli_S88 # Pathway: not_defined # 1 171 2 172 172 266 100.0 3e-70 MKFKKCLLPVAMLASFTLAGCQSNADDHAADVYQTDQLNTKQETKTVNIISILPAKVAVD NAQNKRNAQAFGALIGAVAGGVIGHNVGSGSNSGTTAGAVGGGAVGAAAGSMVNDKTLVE GVSLTYKEGTKVYTSTQVGKECQFTTGLAVVITTTYNETRIQPNTKCPEKS >gi|296918691|gb|GG773009.1| GENE 211 203607 - 204146 560 179 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_2820 NR:ns ## KEGG: ECUMN_2820 # Name: yfgI # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 179 1 179 179 178 99.0 8e-44 MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQHDEWVAERNREIQQEKQ RRANAQAAANKRAATAAANKKARQDKLDAEATADKKRDQSYEDELRSLEIQKQKLALAKE EARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGRDLMKSVGKAEENKSDSWFN >gi|296918691|gb|GG773009.1| GENE 212 204240 - 205817 1954 525 aa, chain - ## HITS:1 COG:ZguaA_2 KEGG:ns NR:ns ## COG: ZguaA_2 COG0519 # Protein_GI_number: 15803031 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Escherichia coli O157:H7 EDL933 # 207 525 1 319 319 658 99.0 0 MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGP ESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSA LVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVASTESCPFAIMANEEKRFYGVQF HPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVARIREQVGDDKVILGLSGGVDS SVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAG ENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHN VGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEY CDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF MTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE >gi|296918691|gb|GG773009.1| GENE 213 205886 - 207352 1723 488 aa, chain - ## HITS:1 COG:YPO2871_3 KEGG:ns NR:ns ## COG: YPO2871_3 COG0516 # Protein_GI_number: 16123063 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Yersinia pestis # 207 486 1 280 281 478 94.0 1e-134 MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIA LAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLPTTTLREVKELTERNGFAG YPVVTEENELVGIITGRDVRFVTDLSQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRV EKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAA GVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGGNVATAAGARALAEAGCSAVKVGIG PGSICTTRIVTGVGVPQITAVADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASAVMV GSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGR VAYKGRLKEIIHQQMGGLRSCMGLTGCGTIDELRTKAEFVRISGAGIQESHVHDVTITKE SPNYRLGS >gi|296918691|gb|GG773009.1| GENE 214 207514 - 208890 1020 458 aa, chain + ## HITS:1 COG:xseA KEGG:ns NR:ns ## COG: xseA COG1570 # Protein_GI_number: 16130434 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Escherichia coli K12 # 1 454 1 454 456 759 93.0 0 MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQLKYEQLKAK LQAEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDD APGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET DVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRRFTQIH HRLQQQHPQLRLARQQTMLERLQKRMSFALESQLKRAGQQQQRLTRQLVQQNPQSRIHRA QTRIQQLEYRLAETLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQV KQVKVGETLTTRLGDGVVISEVSAVTKTRKSRKKTSNP >gi|296918691|gb|GG773009.1| GENE 215 208959 - 217106 3647 2715 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2682 NR:ns ## KEGG: ECS88_2682 # Name: not_defined # Def: outer membrane protein; RatA precursor homolog # Organism: E.coli_S88 # Pathway: not_defined # 1 2715 1 2683 2683 4843 98.0 0 MSLTLNKILVLCALLISAMLPGWSWAESAWQDSSDTVGEFNGTVPTADSASIPVYQGSVF LDPTKTHEVAFTAKPSEFNADVSVSKLLVTNPQDREGDIIATPRWENQTPPAVSLVWADA ARGGGDREGDIIAPPRGETQTPPAVSLVWADAATPDTLLDPQPVADRSFCAQGLAGRSLV AWAQPDPQQTMPLLYLLTSTGYPYESVLMLADQKVTLKIAPAQGDLISVSAAGYDESSGA AKMTVGGSITLTVTTKDCVGNVVGNIPFVIKRKDAENRQGVVNNTAPVKLGTTELTTTAT EYRGTTDANGVATVTVTQANGPGVKTPLVASLAGIAQASETAVIFTVLTSPDVPQATMWG HMPDTLKARDYTFSRPKLAAEVDNEGGTVNDHNETWSTFTWSGADKHCDILPGMRQFGAL ATVVPTSVQDVAGWPMQGNFYWSSLAGMSGQHHAADVSNRSEAQKPDDTTFIVSCVDKEA PDVEPKLVLTPGSYDSTIKAMKVKVGEEASLRLTITDSKNNDQPLAYYYFSLHLDDGINR KNQTDAAWETHPVQIDGGSNVRKVDAHTYEGITDANGEATLTLTQPGGVGVKTHITARMR SDFTASDEKDVIFTVITSPDTDKARMWGHMLGIIEANNIFKRPRLADETDNEQGSVRENN EDWALFDQNSSMQAECGLGHIPSQSSLHSLFVAHPANAIGTEYGWPTLQKAYLSAVEETS HASVNLATGNIDTYSGFKQNYLSCSGNEMVAQIAATTDRDVSAGSRAQAKVGDTITMTVR TFNALNNAPVPYTAFTITKDMGKNRQGQTTGFDDPTRGAIEMNGTLYGTSQPSLVYAGTT DAQGFATVEIKQSQGVGLSTPLNIVPVNSYIPNTVNYNVIFTTLTSPDAVGAQMWGHMDE TITVDALTFARPRLAAEVFSPDGTLTENNEVWSRVSQANASSTSKGGCGANMLPRRSQLS ALYDANNGDGVQTVHGWPTQRQPYWSSSPADQVPHYYTIALNDGARTVGGSTAVYVSCLT TANNPASSITLEVVDPAQWNAAANAAKLKKGETLQVKVTVKDAQGNPLGDIPFTLKRGDG YTRSEEKHVAGSSDALVAPVVVNGGLADETSLNNTAAAYSAMTGSDGTKILTITRPDTHG TKTSLTARLYSDTTKKATLDTIFTVVTSPDSDKAKMWGHMPETVTAADGAVFKRPLLLKE LSSTSGRTAIAEDNEDWAQFTQAQAISTSSNGCGSEYVPSQAGLESLYEANRGNAMKTVQ GWPVASSYLSSTTGSSSLEQRDFKAVNLSSGTSSIIPSATKELLTCQTTPIVKASQIVLE AADLTKFDRMNNVVKVKKGEEAVLRVTTKDAQGKPVGNTAFTLKRNTSVNRANVSTTTSI ASLAVTDAWGNTQNDFLSTTLVIYGVTGADGTTTFTLKQDQTTGLKTELTAALDSSSSTK STLPVVFTVLTSPDSPKAKFWGHMAETATGDDGLIYRRPLLRDENSATTSIGTLVEEGEA WSTFPSGQANDTSINGCGAEYVPTDNELRAIYAHQGSSALHDAIGWPVSRFYISNTVADT FTQTFTYDVVSLKTGDETQMPSSGGALLSCRTTPVAVASQIIVEANDTAQFVKVDDTLSA LKVKKGEDAVIRVVTKNAQGNSVPNVPFILRREGSKNRQNAEMINKSITVINAAGASARM NSSSSLLYGVTGADGTTSFTVKQDDSMGLVTNMYAQLYQLTIESNKLPVMFTVITSPDTP LASYWGHMPETFTTRSGIAFKRPLLTAEHPAGQSTMANNESWLSLNTAAKNDVSKSDCGE PYQPLLSEFQELYSEHPNGAIGTDLGLPLTNTWWAYDKIAYANVWYDQSINLSNGSSSRA LSNTVAFVSCLVNPHAVAASIEMTSTALDAEKTASNDGRPSATAAKGTAIRMTVIVRDSG GNLLPGANFNLIRGTALDRAKNRLDSTYDDLTIVPVTPAGVNMSLYNNGAQALLTTGSDG KATFDVTQNETYGLATPLTATLMRDTTKSATMDVIFTVITSPNSPKAKYWGHMPDTFTSR AGVTFKRPLLAAEATLGSSVSNNNESWSYLFYTNKVTPDCPVEYQPRLNELQGLYNDHPG GTILTDLGLPITAGSGNWWTYEMSTTDALTWYYGVINLKTGQSTTTINGYALMLCLTQPH SAPASLTLSSTAYDEGRTASNGGTPTSSVKKGEMLPIVVTIKDANGNPVGGEGVTLKRVQ AKSRSGISVSSNTVDDLILDEVTPTSARISFNQNTSAWSGFTGSDGTITFNVTQNNTVGL VTPFTASLARNPQVTANQDLIFTVVTSPDSAKANYWGHMPATLTAVNGAVFERPKLWSEL TSTSGVGKINNNNEDWPYFTPTQKSDASVSPCEVARQPLFNDLSSLSARYPNNTFVTETG WPAYYTWWAEDKSADGKDQSVDLRNGTLYTGSTKSFQPCLANARSTVSSVTLTSTAFDAA TQAAKVKKGEAMSVTVTVKDSAGNTVPNVEFTLKRGEASPRNAGATLYGNVVAMDDLVVQ PLSGSAVTLSESGNTISGMTGADGTASFTLRQDNTPGYKMPLTVTLANYASATDTLDAIF TVPTSPNVSSAHFWGHMADTVVVNSKSLHRPLLTTELPSGANPVSSPIINYENWASAHII DASKWDIARQCGSIENAPTYNELELLHTVFNSLGWPSSPSFPYLSSQQCGMDEGTGAQDC SITLINKPGLVTCFQ >gi|296918691|gb|GG773009.1| GENE 216 217227 - 218009 580 260 aa, chain - ## HITS:1 COG:no KEGG:APECO1_4015 NR:ns ## KEGG: APECO1_4015 # Name: sinI # Def: SinI-like protein # Organism: E.coli_APEC # Pathway: not_defined # 1 260 66 325 325 467 99.0 1e-130 MTSDLKGARPQGSETDKRLYSGDKLTVSWEIGDTEGDVDLGGLGDNAKTIDTIRWMSYKD AQGGDPKELVTKVTSYTLTDADRGRYIGIEITPTTQTGTPNVGTALHLYDVSTASGGGSD SDNVAPGPVVNQNLKVAIFVDGTSINLINGSTPIELGKTYVAKLYSDENKNGKFDAGTDA DVTANYDFRWVLSGSSQQLGTSGGIVNSSFDNNNLVIPATNDEARTNLNGPARDGKEALS IPTNGDGVQGYKLHIIYKHK >gi|296918691|gb|GG773009.1| GENE 217 218318 - 220522 2088 734 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2830 NR:ns ## KEGG: UTI89_C2830 # Name: not_defined # Def: SinH-like protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 734 11 744 744 1476 100.0 0 MLRWKRCIILTFISGAAFAAPEINVKQNESLPDLGSQAAQQDEQTNKGKSLKERGADYVI NSATQGFENLTPEALKSQARSYLQSQITSTAQSYIEDTLSPYGKVRSNLSIGQGGDLDGS SIDYFVPWYDNQTTVYFSQFSAQRKEDRTIGNIGLGVRYNFDKYLLGGNIFYDYDFTRGH RRLGLGAEAWTDYLKFSGNYYHPLSDWKDSEDFDFYEERPARGWDIRAEAWLPAYPQLGG KIVFEQYYGNEVALFGTDSLEKDPFAVTLGVKYQPVPLIVVGTDFKAGTGDNTDLSVNAT LNYQFGVPLKDQLDPDKVSAAHSLMGSRHDFVERNNFIVLEYKEKDPLYVTLWLKADVTN EHPECVIKDTPEEAIGLEKCKWTINALINHHYKIVAASWQAKNNAASWQAKNNAARTLVM PVIKENTLTEGNNNHWNLVLPAWQYSSDQAEQEKLNTWRVRLALEDEKGNRQNSGVVEIT VQQDRKIELIVNNIANVPEENNHSHEASAQADGVDGVVMDLDVTDSFGDNTDRNGDALPE DNLTPQLYDAQDKRVTLTNKPCSTDNPCVFIAKQDKEKGTVTLSSTLPGTYRWKAKAAPY DDSNYVDVTFLGAEIGGLNAFIYRVGAAKPSNLIGKDKEPLPLNNTYRFVLWRDNNKDGV FQQVEKLTDEEMVQYDYKWEFTGKSINGEVGAQANTSNEDIVIPATNREAAQTYGAQAGD GLQGYGLRVLYTKK >gi|296918691|gb|GG773009.1| GENE 218 220731 - 220946 191 71 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2686 NR:ns ## KEGG: ECS88_2686 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 71 1 71 71 125 100.0 5e-28 MALNCPTCKTPLERNGETAHCATCDKDFTVQALCPECHQALQVLKACGAVDYFCQHGHGL ISKKRVEFIIA >gi|296918691|gb|GG773009.1| GENE 219 221009 - 222481 2059 490 aa, chain - ## HITS:1 COG:STM2519 KEGG:ns NR:ns ## COG: STM2519 COG1160 # Protein_GI_number: 16765839 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Salmonella typhimurium LT2 # 1 490 1 490 490 950 97.0 0 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI DGTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANKT DGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEVDEDAEYWA QFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS IYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISD QDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSG VGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIV VIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRIQFKEGENPYANKRNTLTPTQMRKRK RLMKHIKKSK >gi|296918691|gb|GG773009.1| GENE 220 222599 - 223777 1144 392 aa, chain - ## HITS:1 COG:ECs3374 KEGG:ns NR:ns ## COG: ECs3374 COG1520 # Protein_GI_number: 15832628 # Func_class: S Function unknown # Function: FOG: WD40-like repeat # Organism: Escherichia coli O157:H7 # 13 392 13 392 392 716 98.0 0 MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFY SNLHPALADNVVYAADRAGLVKALNADDGKEIWSVNLAEKDGWFSKDPALLSGGVTVSGG HVYIGTEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGA VKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE IDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVD QNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQ KVDSSGFQTEPVAADGKLLIQAKDGTVYSITR >gi|296918691|gb|GG773009.1| GENE 221 223788 - 224408 696 206 aa, chain - ## HITS:1 COG:yfgM KEGG:ns NR:ns ## COG: yfgM COG2976 # Protein_GI_number: 16130438 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 206 1 206 206 341 99.0 5e-94 MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNA VTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSD ENLKAVINLRLARVQVQLKQADAALKTLDAIKGEGWAAIVADLRGEALLSKGDKQGARSA WEAGVKSDVTPALSEMMQMKINNLSI >gi|296918691|gb|GG773009.1| GENE 222 224426 - 225700 1523 424 aa, chain - ## HITS:1 COG:ECs3376 KEGG:ns NR:ns ## COG: ECs3376 COG0124 # Protein_GI_number: 15832630 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 424 1 424 424 860 100.0 0 MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVT DVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKG RYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARANYRDA LVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQALLNDAPALGDYLDEESREHFAGL CKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRAT PAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKL MTNHGGGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR TLLG >gi|296918691|gb|GG773009.1| GENE 223 225811 - 226929 1281 372 aa, chain - ## HITS:1 COG:ECs3377 KEGG:ns NR:ns ## COG: ECs3377 COG0821 # Protein_GI_number: 15832631 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 711 100.0 0 MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR VSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL AADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNNDMIDQLEARIRAKASQLD EARRIDVQQVEK >gi|296918691|gb|GG773009.1| GENE 224 226956 - 227963 732 335 aa, chain - ## HITS:1 COG:ECs3378 KEGG:ns NR:ns ## COG: ECs3378 COG1426 # Protein_GI_number: 15832632 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 335 1 337 337 525 94.0 1e-149 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELNNNQSQSVPLDTSTTTDQAMATTPTS PVDTTATNTQTPAVTAPAPAVDPQQNAVVPPSQANVDTAATPAPAATTTPDGAAPLPTDQ AGVTTPAVDPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPA AVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ >gi|296918691|gb|GG773009.1| GENE 225 228248 - 229402 1458 384 aa, chain - ## HITS:1 COG:yfgB KEGG:ns NR:ns ## COG: yfgB COG0820 # Protein_GI_number: 16130442 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Escherichia coli K12 # 1 384 1 384 384 790 100.0 0 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM TDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVS SQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDE IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG DVIDRTKRTLRKRMQGEAIDIKAV >gi|296918691|gb|GG773009.1| GENE 226 229552 - 229983 524 143 aa, chain - ## HITS:1 COG:ECs3380 KEGG:ns NR:ns ## COG: ECs3380 COG0105 # Protein_GI_number: 15832634 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 275 99.0 2e-74 MAIERTFSIIKPNAVAKNVIGSIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFF DGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSD SVESAAREIAYFFGEGEVCPRTR >gi|296918691|gb|GG773009.1| GENE 227 230132 - 232408 1373 758 aa, chain - ## HITS:1 COG:pbpC KEGG:ns NR:ns ## COG: pbpC COG4953 # Protein_GI_number: 16130444 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein PbpC # Organism: Escherichia coli K12 # 2 758 14 770 770 1439 98.0 0 MLAAAPFIIILAAWAADKLWPLPLQEVNPARVVVAQDGTPLWRFADADGIWRYPVTIEDV SPRYLEALINYEDRWFWKHPGVNPFSVARAAWQDLTSGRVISGGSTLTMQVARLLDPHPK TFGGKIRQLWRALQLEWHLSKREILTLYLNRAPFGGTLQGIGAASWAYLGKSPANLSYSE AAMLAVLPQAPSRLRPDRWPERAEAARNKVLERMAVQGVWSRERVKESREEPIWLAPRQM PQLAPLFSRMMLGKSKSDKIVTTLDAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMR VRGWVGSVDLNDDSRFGHVDMVNAIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTG DYRPGNFDSGFHGPISMSEALVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAP NLSLILGGAGAKLEDMAAAYTAFARHGKAGKLRLQPDDPLLERPLMSSGAAWIIRRIMAD EAQPLPDGALPRVAPLAWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFAS AVPLLNQVNNILLSRSVNLPEDPRPDSVSRGVICWPGGQSLPEGDGNCRRRLATWLLDGS QPPTLLLPEQEGINGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAV RLPPASTICPPYGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGE PLTERGRNVTLHLTDKGDYQLLVMDDVGQIATVKFVMQ >gi|296918691|gb|GG773009.1| GENE 228 232453 - 237414 4550 1653 aa, chain - ## HITS:1 COG:ECs3386 KEGG:ns NR:ns ## COG: ECs3386 COG2373 # Protein_GI_number: 15832640 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Escherichia coli O157:H7 # 1 1653 1 1653 1653 3181 98.0 0 MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSENVSSAKLSAPERQKLAQ QSAGKALTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIHVVDKKSGKVDGAWELSHN LKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDDEKTITTRDIQPSVGFASRGSLLPGK VVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRNSLANWQSDKLLQMADLVYTGRF DLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAGRYDYSNPATLFTLSDIGVSAHRYH NRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQATSDAQGHVQLENDKNAALLLARKNGR TTLLDLKLPALDLAEFNIAGAPGYSKQFFMFGPRDLYRPGETVILNGLLRDADGKALPDQ PIKLDVIKPDGQVLRSVVSQPENGLYHFTWPLDSNAATGMWHIRANTGDNQYRMWDFHVE DFMPERMALNLTGEKTPLTPKDEVKFSVVGYYLYGAPANGNTLQGQLFLRPLREAVSALP GFEFGDIAAENLSRTLDEVQLTLDDKGRGEVSTESQWKETHSPLQVIFQGSLLESGGRPV TRRAEQAIWPADALPGIRPQFASKSVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKK AVSGLQVRLIRERRDYYWNWSEYEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGA YRLEVKAPNEAVSSVRFWAGYSWQDNSDGGGAVRPDRVTLKLDKASYCPGDTIKLHIAAP TAGKGYAMVESSEGPLWWQEIDVPAQGLDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSAT PKRAVGVLHLPLGDENRRLDLALETPTKMRPNQPLTVKIKASNKNGEMPKQVNVLVSAVD SGVLNITDYVTPDPWQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKP PVNHVNIVAQQALPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAP VIAELNMPRFMASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSNSPAPVELAPGVR TTLFIPVRALPGYGDGDIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQP GETWALPADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLY TNAAQLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDF LVRAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ KAPLGALREIWEHRADAASGLPLLQLGVALKTMGDAMRGEEAIVLALKTPRNSDERIWLG DYGSPLRDSALMLSLLEENKLLPDEQYSLLNTLSQQAFGERWLSTQESNALFLAARTLQD LPGKWQAQTTFSAEPLTGEKAQTSNLNSDQLATLQVTNSGDQPLWLRVDASGYPQSAPLP ASNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLPAGLELENQ NLANGSASLEQSGGEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPVTLVYLARAVT PGTYQVPQPMVESMYVPQWRATGAADDLLIVRP >gi|296918691|gb|GG773009.1| GENE 229 237621 - 238466 762 281 aa, chain + ## HITS:1 COG:sseA KEGG:ns NR:ns ## COG: sseA COG2897 # Protein_GI_number: 16130446 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 281 54 334 334 566 99.0 1e-161 MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSD HTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILG GGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPATRF NAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGS GVTAAVVLLALATLDVTNVKLYDGAWSEWGARADLPVEPVK >gi|296918691|gb|GG773009.1| GENE 230 238997 - 239773 759 258 aa, chain - ## HITS:1 COG:no KEGG:APECO1_4002 NR:ns ## KEGG: APECO1_4002 # Name: sseB # Def: enhanced serine sensitivity protein SseB # Organism: E.coli_APEC # Pathway: not_defined # 1 258 4 261 261 483 100.0 1e-135 MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGEAVVEDSALDLQHWEKE DGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETLFLNAKLPTGKEFMPREIS LLIGEEGNPLSSQEVLEGGESLILSEVAEPPAQMIDSLTTLFKTIKPVKRAFICSIKENE EAQPNLLIGIEADGDIEEIIQAAGSVATDTLPGDEPIDICQVKKGEKGISHFITEHIAPF YERRWGGFLRDFKQNRII >gi|296918691|gb|GG773009.1| GENE 231 239915 - 241198 1453 427 aa, chain - ## HITS:1 COG:pepB KEGG:ns NR:ns ## COG: pepB COG0260 # Protein_GI_number: 16130448 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Escherichia coli K12 # 1 427 30 456 456 848 99.0 0 MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLIQRAARKIDGLGIKHVQ LSGEGWDADRCWAFWQGYKAPKGIRKVEWPDLDDAQRQELDNRLMIIDWVRDTINAPAEE LGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGLHTVGRGSERSPVLLALDYNP TGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSDMGGAATVTGALAFAITRGLNKR VKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNTDAEGRLVLADGLIDASAQKPELII DAATLTGAAKTALGNDYHALFSFDDALAGRLLASAAQENEPFWRLPLAEFHRNQLPSNFA ELNNTGSAAYPAGASTAAGFLSHFVENYQQGWLHIDCSATYRKAPVEQWSAGATGLGVRT IANLLTA >gi|296918691|gb|GG773009.1| GENE 232 241257 - 241457 328 66 aa, chain - ## HITS:1 COG:ECs3390 KEGG:ns NR:ns ## COG: ECs3390 COG2975 # Protein_GI_number: 15832644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 66 1 66 66 114 100.0 5e-26 MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLV WLDEAE >gi|296918691|gb|GG773009.1| GENE 233 241469 - 241804 410 111 aa, chain - ## HITS:1 COG:ECs3391 KEGG:ns NR:ns ## COG: ECs3391 COG0633 # Protein_GI_number: 15832645 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 206 99.0 6e-54 MPKIVILPHQDLCPDGAVLEANSGETILDVALRNGIEIEHACEKSCACTTCHCIVREGFD SLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRYTINHAREH >gi|296918691|gb|GG773009.1| GENE 234 241806 - 243656 2299 616 aa, chain - ## HITS:1 COG:ECs3392 KEGG:ns NR:ns ## COG: ECs3392 COG0443 # Protein_GI_number: 15832646 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 616 1 616 616 1090 100.0 0 MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETLADHEGRHLLPSVVHYQ QQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPHLPYQFQASENGLPMIETA AGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVL RLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDD FDHLLADYIREQAGIPDRSDNRVQRELLDAAIAAKIALSDADSVTVNVAGWQGEISREQF NELIAPLVKRTLLACRRALKDAGVEADEVLEVVMVGGSTRVPLVRERVGEFFGRPPLTSI DPDKVVAIGAAIQADILVGNKPDSEMLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARA QDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGL LSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVL ESLHGALAADAALLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRM DQSVRRALKGHSVDEV >gi|296918691|gb|GG773009.1| GENE 235 243673 - 244188 599 171 aa, chain - ## HITS:1 COG:ECs3393 KEGG:ns NR:ns ## COG: ECs3393 COG1076 # Protein_GI_number: 15832647 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Escherichia coli O157:H7 # 1 171 1 171 171 271 100.0 5e-73 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT LRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKR VKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSSAEQLEEKLLDF >gi|296918691|gb|GG773009.1| GENE 236 244284 - 244607 444 107 aa, chain - ## HITS:1 COG:ECs3394 KEGG:ns NR:ns ## COG: ECs3394 COG0316 # Protein_GI_number: 15832648 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 207 100.0 3e-54 MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGV KVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESFHV >gi|296918691|gb|GG773009.1| GENE 237 244624 - 245010 593 128 aa, chain - ## HITS:1 COG:ECs3395 KEGG:ns NR:ns ## COG: ECs3395 COG0822 # Protein_GI_number: 15832649 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Escherichia coli O157:H7 # 1 128 1 128 128 237 100.0 4e-63 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD YKSKREAK >gi|296918691|gb|GG773009.1| GENE 238 245038 - 246252 1692 404 aa, chain - ## HITS:1 COG:ECs3396 KEGG:ns NR:ns ## COG: ECs3396 COG1104 # Protein_GI_number: 15832650 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Escherichia coli O157:H7 # 1 404 9 412 412 820 100.0 0 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIAD LVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE VTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVD ATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMR SGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNI LNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRF TTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQGVDLNSIEWAHH >gi|296918691|gb|GG773009.1| GENE 239 246364 - 246852 586 162 aa, chain - ## HITS:1 COG:ECs3397 KEGG:ns NR:ns ## COG: ECs3397 COG1959 # Protein_GI_number: 15832651 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 278 100.0 4e-75 MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRG PGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGF LNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKLRA >gi|296918691|gb|GG773009.1| GENE 240 247122 - 247862 962 246 aa, chain - ## HITS:1 COG:yfhQ KEGG:ns NR:ns ## COG: yfhQ COG0565 # Protein_GI_number: 16130457 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Escherichia coli K12 # 1 246 1 246 246 483 100.0 1e-136 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN KGNKAE >gi|296918691|gb|GG773009.1| GENE 241 247981 - 248784 999 267 aa, chain + ## HITS:1 COG:ECs3399 KEGG:ns NR:ns ## COG: ECs3399 COG0483 # Protein_GI_number: 15832653 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Escherichia coli O157:H7 # 1 267 1 267 267 530 100.0 1e-150 MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYP QHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPM RNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECA DFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTG NIVAGNPRVVKAMLANMRDELSDALKR >gi|296918691|gb|GG773009.1| GENE 242 248948 - 249802 688 284 aa, chain + ## HITS:1 COG:yfhR KEGG:ns NR:ns ## COG: yfhR COG1073 # Protein_GI_number: 16130459 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 284 10 293 293 583 99.0 1e-167 MALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGT RLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSK GTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGQGDREGIRAVILD STFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYS LAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN >gi|296918691|gb|GG773009.1| GENE 243 249993 - 251273 877 426 aa, chain + ## HITS:1 COG:ECs3401 KEGG:ns NR:ns ## COG: ECs3401 COG3711 # Protein_GI_number: 15832655 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli O157:H7 # 1 426 8 433 433 809 98.0 0 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATTATFSELNGVDDDIASLDISETGREILR YHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSHFTPALKSELKRRGIA RNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRKSIKR LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTR AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR ELTLLPLNIKHMSVKVFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR KMLESA >gi|296918691|gb|GG773009.1| GENE 244 251265 - 252404 984 379 aa, chain - ## HITS:1 COG:hcaT KEGG:ns NR:ns ## COG: hcaT COG0477 # Protein_GI_number: 16130461 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 379 1 379 379 635 99.0 0 MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLLLGAGLVARFLGSLLIA PRVSDPSRLISALRVLALLTLLFAVAFWAGAHVAWLMLVMIGFNLFFSPLVPLTDALANT WQKQFPLDYGKVRLWGSVAFVIGSALTGKLVSMFDYRVILALLTLGVASMLLGFLIRPTI QPQGASRQQESTGWSAWLALVRQNWRFLACVCLLQGAHAAYYGFSAIYWQAAGYSASAVG YLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAICGVVRWGIMGATTALPWLIVVQILH CGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVAMGGSIAIMTVFAGFLYQYLGHGVFWV MALVALPAMFLRPKVVPSC >gi|296918691|gb|GG773009.1| GENE 245 252773 - 253195 396 140 aa, chain + ## HITS:1 COG:yphA KEGG:ns NR:ns ## COG: yphA COG2259 # Protein_GI_number: 16130468 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 140 25 164 164 231 97.0 2e-61 MNSLRYFDFGTARPVLLLIARIAVVLIFIIFGFPKMMGFGGTVQYMASLGAPMPMLAAII AVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNVSI AGAFLLLAITGPGAISLDRR >gi|296918691|gb|GG773009.1| GENE 246 253355 - 254227 794 290 aa, chain - ## HITS:1 COG:yphB KEGG:ns NR:ns ## COG: yphB COG2017 # Protein_GI_number: 16130469 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli K12 # 1 290 1 290 290 568 95.0 1e-162 MTIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGN RFVWQGREYQLQPNVEWDAHYLHGDAWLGQWQCVSRSEDSLCLVYEHRSGVYHYRVSQAF HLTADTLTVTLSVTNKGAETLPFGTGWHPYFPLSPQTRIQAQASCYWREQEQWLAGEFCE QLPQELDFNQLAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPLAPCYFIFVSDPA FDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTISEMSLRVALL >gi|296918691|gb|GG773009.1| GENE 247 254239 - 255291 901 350 aa, chain - ## HITS:1 COG:yphC KEGG:ns NR:ns ## COG: yphC COG1063 # Protein_GI_number: 16130470 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 350 15 364 364 724 100.0 0 MLAAYLPGNSTVDLREVAVPTPGINQVLIKMKSSGICGSDVHYIYHQHRATAAAPDKPLY QGFINGHEPCGQIVAMGQGCRHFKEGDRVLVYHISGCGFCPNCRRGFPISCTGEGKAAYG WQRDGGHAEYLLAEEKDLILLPDALSYEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGL GPVGMMAMMLAKGRGAKRIIGVDMLPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGG ADVALDCSGNAAGRLLALQSTADWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLF HMEKCAHDLTDWKLWPRNAITHRFSLEQAGDAYALMASGKCGKVVINFPD >gi|296918691|gb|GG773009.1| GENE 248 255366 - 256364 1123 332 aa, chain - ## HITS:1 COG:ECs3412 KEGG:ns NR:ns ## COG: ECs3412 COG1172 # Protein_GI_number: 15832666 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 332 1 332 332 491 99.0 1e-139 MSASSLPLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDA ATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFDVPLAIACLLVLLLGALMGT LAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPINENEVLDWLGGQFLGVPVSAL IMMVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGIL LAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGI NSFFQQVVRGVIIVVAVLANILLTQRSSKAKR >gi|296918691|gb|GG773009.1| GENE 249 256389 - 257900 188 503 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 278 480 21 212 305 77 27 8e-13 MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSE RPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGM IDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSL ASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHH IVSLMLGRDHVDIAPVAPQEIMDQAVLEVRALRHKPKLEDISFTLRCGEVLGIAGLLGAG RSELLKAIVGLETYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDEN TVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVY AASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHG TFSQEFHSPVNVDELMSAILSVH >gi|296918691|gb|GG773009.1| GENE 250 257923 - 258906 1071 327 aa, chain - ## HITS:1 COG:ECs3414 KEGG:ns NR:ns ## COG: ECs3414 COG1879 # Protein_GI_number: 15832668 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 598 98.0 1e-171 MPKKMTRTRNLLLMATLLGSALFARASDKEMTIGAIYLDTQGYYAGVRQGVQDAAKDSSV QVQLIETNAQGDISKESTFVDTLVERNVDAIILSAVSENGSSRTVRRASEAGIPVICYNT CINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRK GFEEVLKTRVPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVR NQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEK VIQVPIDLYTKTEDGKQWLATHVDGLP >gi|296918691|gb|GG773009.1| GENE 251 259003 - 262284 3056 1093 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2868 NR:ns ## KEGG: UTI89_C2868 # Name: yphG # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 1093 32 1124 1124 2233 100.0 0 MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYGVTDTLSEQKTLKSWQA VWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPALVGLLGPWISGGIEFNWP QHHRPTTFMPVDFTLEAHDDGAQTVWVGETEPMHGLQVMTGFTLRPDRAALEIASRVYNG NATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKRAVSAFPIATGTYYKVDYSAGVD ISRYKNVPVPTSYMAEKSQYDFVGAWCHDEDGGLLHVANHHIAPGKKQWSWGHSEFGQAW DKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEEKRFEQYFLPYHSLGMVQNASRDAVIK LQRSERGIEWGLYAISPLNGYRLAIREIGKCNALLDDAVALTPATAIQGVLHGINPERLT IELSDADGNIVLSYHEHQSQALPLPDVAKAPLAAQDITSTDEAWFIGQHLEQYHHASRSP FDYYLRGVALDPLDYRCNLALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLI RASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACP TNQEVLCLHNLLLVLSGRQDNARLQREKLLRDYPLNATLWWLNWFDGRSESALVQWRGLC QGRDVNALMTAGQLINWGMPALAADMLNALDCQRTLPLYLQASLLPKAERGELVVKAIDA FPQFVRFPNTLEEVAALESIEECWFARHLLACFYYNKRSYGKAIALWQRCVEMSPEFADG WRGLAIHAWNKQHDYELAARYLDNAYQLAPQDARLLFERDLLDKLSGVTPEKRLARLENN LEIALKRDDMTAELLNLWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQ HLDAREPQQASELLHAALHYPENLSEGRLPGQTDNDIWFWQAVCANAQGDETEAMRCLRL AATGDRTINIHSYYNDQPVDYLFWQGMALRLLGEQHTAQQLFSEMKQWAKEMAKTSIEAD FFAVSQPDLLSLYSDLQQQHKEKCLMVAMLAAAGLGEVAHYESARAELMAINPAWPKAAL FTTVMPFIFSYVH >gi|296918691|gb|GG773009.1| GENE 252 262402 - 263595 1128 397 aa, chain + ## HITS:1 COG:ECs3416 KEGG:ns NR:ns ## COG: ECs3416 COG1940 # Protein_GI_number: 15832670 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli O157:H7 # 1 397 3 399 399 807 98.0 0 MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNI DDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQA LLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWATPIEVKYLLEEKL GIRVMVDNDCVMLALAEKWQNNSQVRDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH TIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQS GEPWITSWVDHSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDR DEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI >gi|296918691|gb|GG773009.1| GENE 253 263659 - 264912 1543 417 aa, chain - ## HITS:1 COG:glyA KEGG:ns NR:ns ## COG: glyA COG0112 # Protein_GI_number: 16130476 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Escherichia coli K12 # 1 417 1 417 417 811 100.0 0 MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMN LAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGV VDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL AKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVE VFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS GIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIERIKGKVLDICARYPVYA >gi|296918691|gb|GG773009.1| GENE 254 265241 - 266431 1234 396 aa, chain + ## HITS:1 COG:ZhmpA_2 KEGG:ns NR:ns ## COG: ZhmpA_2 COG1018 # Protein_GI_number: 15803077 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 EDL933 # 150 396 1 247 247 515 99.0 1e-146 MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNA IAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFSPGQEVLDAW GKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAKTPRSALITSFELEPVDGGAV AEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVG DVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGD VHAFADEVKELGQSLPRFTAHTWYRQPNEADRAKGQFDSEGLMDLSKLEGAFSDPTMQFY LCGPVGFMQFAAKQLVDLGVKQENIHYECFGPHKVL >gi|296918691|gb|GG773009.1| GENE 255 266476 - 266814 465 112 aa, chain - ## HITS:1 COG:ECs3419 KEGG:ns NR:ns ## COG: ECs3419 COG0347 # Protein_GI_number: 15832673 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 191 100.0 4e-49 MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVK IEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI >gi|296918691|gb|GG773009.1| GENE 256 266875 - 268209 1256 444 aa, chain - ## HITS:1 COG:ECs3420 KEGG:ns NR:ns ## COG: ECs3420 COG2204 # Protein_GI_number: 15832674 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 832 99.0 0 MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGVEGLRVLNREKVDLVISDLRMD EMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDA LEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNA SPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDM PAPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMTRGEFREDLYYRLNVV SLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVI EQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAARM AGRNRTEFYKLLSRHELDANDFKE >gi|296918691|gb|GG773009.1| GENE 257 268199 - 268912 459 237 aa, chain - ## HITS:1 COG:no KEGG:APECO1_3976 NR:ns ## KEGG: APECO1_3976 # Name: yfhG # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 237 3 239 239 410 100.0 1e-113 MRHIFQRLLPRRLWLAGLPCLALLGCVQSHNKPAIDTPAEEKIPVYQLADYLSTECSDIW ALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGNWQNTFKQGILLADAKITPYE RRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEERQRYSKLQQSSDSELDTLRQQ HHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTPHESEKPAPSTDEVTPDEP >gi|296918691|gb|GG773009.1| GENE 258 269077 - 270459 987 460 aa, chain - ## HITS:1 COG:ECs3422 KEGG:ns NR:ns ## COG: ECs3422 COG0642 # Protein_GI_number: 15832676 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 15 460 51 496 496 843 99.0 0 MLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEAMTNAALEMERSYRQY CVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLNNLAQLQCNNSGPDAAA AARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTR MIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLR HLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQ ADSAVELENVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSN AVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSG LGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK >gi|296918691|gb|GG773009.1| GENE 259 271080 - 274964 4456 1294 aa, chain - ## HITS:1 COG:ECs3423_1 KEGG:ns NR:ns ## COG: ECs3423_1 COG0046 # Protein_GI_number: 15832677 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Escherichia coli O157:H7 # 1 984 2 985 985 1990 99.0 0 MEILRGSPALSAFRINKLLARFQAARLLVHTIYAEYVHFADLNAPLNDDEHAQLERLLKY GPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQVNRLERGVAYYIEAGTLTN EQWQQVTAELHDRMMETVFFALDDAEQLFAHHQPTPVTSVDLLGQGRQALIDANLRLGLA LAEDEIDYLQDAFTRLGRNPNDIELYMFAQANSEHCRHKIFNADWVIDGEQQPKSLFKMI KNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHETGRYDFHQEPAHILMKVETHNHPTA ISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPERIVT ALDIMTEGPLGGAAFNNEFGRPALNGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIR ADHVQKGEINVGAKLVVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRC QEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEPGMSPLE IWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLP LDVLLGKTPKMTRDVQTLKAKGDALAREGITIADAVKRVLHLPTVAEKTFLVTIGDRSVT GMVARDQMVGPWQVPVANCAVTTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALT NIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSM KTRWQEGNEEREMTSPLSLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGAT ALAQVYRQLGDKPADVRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAG HCGIDADIATLGDDRLAALFNEELGAVIQVRAADREAVEAVLAQHGLADCVHYVGQAVSG DRFVITANGQTVFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKL SFDINEDVAAPFIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLAGRTG LEGFHVLVACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMM SNLRELIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRV EVRDAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHP ERVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG >gi|296918691|gb|GG773009.1| GENE 260 275226 - 276782 1627 518 aa, chain + ## HITS:1 COG:yfhD KEGG:ns NR:ns ## COG: yfhD COG4623 # Protein_GI_number: 16130483 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein # Organism: Escherichia coli K12 # 47 518 1 472 472 912 99.0 0 MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEIN GKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQ PGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKDTKFPELSWKVD DKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNT LSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAE EIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYL QDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQ KPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTE LGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN >gi|296918691|gb|GG773009.1| GENE 261 276779 - 277282 479 167 aa, chain - ## HITS:1 COG:ECs3425 KEGG:ns NR:ns ## COG: ECs3425 COG0590 # Protein_GI_number: 15832679 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Escherichia coli O157:H7 # 1 167 12 178 178 337 99.0 9e-93 MSEVEFSHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEI MALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDV LHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD >gi|296918691|gb|GG773009.1| GENE 262 277340 - 277975 502 211 aa, chain - ## HITS:1 COG:STM2569 KEGG:ns NR:ns ## COG: STM2569 COG0560 # Protein_GI_number: 16765889 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Salmonella typhimurium LT2 # 1 211 1 211 211 366 91.0 1e-101 MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAAR WPMSLLLWGCTFGHNEARLQALQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITG SPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYS GYSDSNQDNPLLYFCQHRWRVTPRGELQQLE >gi|296918691|gb|GG773009.1| GENE 263 278184 - 279032 796 282 aa, chain + ## HITS:1 COG:ECs3427 KEGG:ns NR:ns ## COG: ECs3427 COG1737 # Protein_GI_number: 15832681 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 282 25 306 306 524 99.0 1e-149 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNTEE KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV >gi|296918691|gb|GG773009.1| GENE 264 279088 - 279348 290 86 aa, chain + ## HITS:1 COG:ECs3428 KEGG:ns NR:ns ## COG: ECs3428 COG1145 # Protein_GI_number: 15832682 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli O157:H7 # 1 86 1 86 86 151 98.0 3e-37 MALLITKKCINCDMCEPECPNEAISMGEHIYEINSDKCTECVGHYETPTCQKVCPIPNTI VKDPQHVETEEQLWDKFVLMHHADKI >gi|296918691|gb|GG773009.1| GENE 265 279619 - 279771 69 50 aa, chain - ## HITS:1 COG:no KEGG:EFER_0512 NR:ns ## KEGG: EFER_0512 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 50 5 54 54 99 100.0 3e-20 MPLNSPIETSGVVKALVWSAALDSNNSHVQFWGDVRANLNGCIPCLRKNE >gi|296918691|gb|GG773009.1| GENE 266 280043 - 280423 322 126 aa, chain - ## HITS:1 COG:ECs3429 KEGG:ns NR:ns ## COG: ECs3429 COG0736 # Protein_GI_number: 15832683 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Escherichia coli O157:H7 # 1 126 1 126 126 238 99.0 2e-63 MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWEIWKTHHQPVRFLAKRFAVKEAA AKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVVNMHVTLADERHYACA TVIIES >gi|296918691|gb|GG773009.1| GENE 267 280423 - 281154 979 243 aa, chain - ## HITS:1 COG:ECs3430 KEGG:ns NR:ns ## COG: ECs3430 COG0854 # Protein_GI_number: 15832684 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Escherichia coli O157:H7 # 1 243 1 243 243 434 98.0 1e-122 MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVCI LRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQREKMRDAC KRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAAT FATSLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLE ARG >gi|296918691|gb|GG773009.1| GENE 268 281166 - 281894 659 242 aa, chain - ## HITS:1 COG:ECs3431 KEGG:ns NR:ns ## COG: ECs3431 COG1381 # Protein_GI_number: 15832685 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 242 1 242 242 470 100.0 1e-132 MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRF GGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSL AGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDN KTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH YE >gi|296918691|gb|GG773009.1| GENE 269 281906 - 282811 1044 301 aa, chain - ## HITS:1 COG:era KEGG:ns NR:ns ## COG: era COG1159 # Protein_GI_number: 16130491 # Func_class: R General function prediction only # Function: GTPase # Organism: Escherichia coli K12 # 1 301 1 301 301 599 99.0 1e-171 MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIY VDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRDGKAPVI LAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHF PEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVERE GQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLGYVDD L >gi|296918691|gb|GG773009.1| GENE 270 282808 - 283488 687 226 aa, chain - ## HITS:1 COG:ECs3433 KEGG:ns NR:ns ## COG: ECs3433 COG0571 # Protein_GI_number: 15832687 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Escherichia coli O157:H7 # 1 226 1 226 226 422 100.0 1e-118 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE >gi|296918691|gb|GG773009.1| GENE 271 283719 - 284693 1045 324 aa, chain - ## HITS:1 COG:ECs3434 KEGG:ns NR:ns ## COG: ECs3434 COG0681 # Protein_GI_number: 15832688 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 651 100.0 0 MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGDSLDKATLKKVAPKPGW LETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTL IETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENA LPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILT VPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAI WMSFDKQEGEWPTGVRLSRIGGIH >gi|296918691|gb|GG773009.1| GENE 272 284709 - 286508 2090 599 aa, chain - ## HITS:1 COG:ECs3435 KEGG:ns NR:ns ## COG: ECs3435 COG0481 # Protein_GI_number: 15832689 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Escherichia coli O157:H7 # 1 599 1 599 599 1164 99.0 0 MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVT LDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAM EMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVQDVLERLVRDI PPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDKVKVMSTGQTYNADRLGIF TPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTLARNPAEKALPGFKKVKPQVYAGLF PVSSDDYEAFRDALGKLSLNDASLFYEPESSSALGFGFRCGFLGLLHMEIIQERLEREYD LDLITTAPTVVYEVETTSREVIYVDSPSKLPAVNNIYELREPIAECHMLLPQAYLGNVIT LCVEKRGVQTNMVYHGNQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDM VRVDVLINGERVDALALITHRGNSQNRGRELVEKMKDLIPRQQFDIAIQAAIGTHIIARS TVKQLRKNVLAKCYGGDISRKKKLLQKQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK >gi|296918691|gb|GG773009.1| GENE 273 286706 - 287185 375 159 aa, chain - ## HITS:1 COG:rseC KEGG:ns NR:ns ## COG: rseC COG3086 # Protein_GI_number: 16130495 # Func_class: T Signal transduction mechanisms # Function: Positive regulator of sigma E activity # Organism: Escherichia coli K12 # 1 159 1 159 159 293 99.0 1e-79 MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPCDEPLV PGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFASDVAALCGAILGGFGGFLI ARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ >gi|296918691|gb|GG773009.1| GENE 274 287182 - 288138 694 318 aa, chain - ## HITS:1 COG:ECs3437 KEGG:ns NR:ns ## COG: ECs3437 COG3026 # Protein_GI_number: 15832691 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 613 99.0 1e-175 MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYELSFISINKQGVESLRY RHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFK RLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDTESKLPMRVDLLDRDGETL EQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKAKFSWTPTWLPQGFSEVSSSRRP LPTMDNMPIESRLYSDGLFSFSVNVNRATPSSSDQMLRTGRRTVSTSVRDNAEITIVGEL PPQTAKRIAENIKFGAAQ >gi|296918691|gb|GG773009.1| GENE 275 288138 - 288788 550 216 aa, chain - ## HITS:1 COG:rseA KEGG:ns NR:ns ## COG: rseA COG3073 # Protein_GI_number: 16130497 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Escherichia coli K12 # 1 216 1 216 216 329 99.0 3e-90 MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVM AAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQH YNGQSETSRQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDY ELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ >gi|296918691|gb|GG773009.1| GENE 276 288821 - 289396 436 191 aa, chain - ## HITS:1 COG:ECs3439 KEGG:ns NR:ns ## COG: ECs3439 COG1595 # Protein_GI_number: 15832693 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 360 100.0 1e-100 MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRA LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPEN LMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA IDNKVQPLIRR >gi|296918691|gb|GG773009.1| GENE 277 289393 - 289548 79 51 aa, chain - ## HITS:1 COG:no KEGG:ECBD_1107 NR:ns ## KEGG: ECBD_1107 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 51 1 51 51 66 100.0 3e-10 MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFGLGRLYLG >gi|296918691|gb|GG773009.1| GENE 278 289804 - 291426 1208 540 aa, chain + ## HITS:1 COG:nadB KEGG:ns NR:ns ## COG: nadB COG0029 # Protein_GI_number: 16130499 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Escherichia coli K12 # 1 540 1 540 540 1109 97.0 0 MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDET DSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTR EGGHSHRRILHAADATGREVETTLVGKAQNHPNIRVLERSNAVDLIVSDKIGLPGTRWVV GAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEF NQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHE MKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTKEPVPIVPAAHYTCGGVMVD DHGRTDVDGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDISRRIPYAHGVSTLP PWDESRVENPDERVVIQHNWHELRLFMWDYVGIVRTTKRLARALRRITMLQQEIDEYYAH FRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTHSGPSILSAGNHYINR >gi|296918691|gb|GG773009.1| GENE 279 291411 - 292148 741 245 aa, chain - ## HITS:1 COG:yfiC KEGG:ns NR:ns ## COG: yfiC COG4123 # Protein_GI_number: 16130500 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Escherichia coli K12 # 1 245 41 285 285 504 98.0 1e-143 MSQSTSVFRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLAL MLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTADILQWITQQTVRFDLII SNPPYYQQGVECATPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLPEQIGNGFTEL ALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGPDQNYSEAYTALTQA FYLFM >gi|296918691|gb|GG773009.1| GENE 280 292280 - 293614 1490 444 aa, chain + ## HITS:1 COG:ECs3442 KEGG:ns NR:ns ## COG: ECs3442 COG0513 # Protein_GI_number: 15832696 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 778 100.0 0 MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL GKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRH RDTKNIGKRRKPSGTGVPPQTTEE >gi|296918691|gb|GG773009.1| GENE 281 293647 - 294528 453 293 aa, chain - ## HITS:1 COG:ECs3443 KEGG:ns NR:ns ## COG: ECs3443 COG0583 # Protein_GI_number: 15832697 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 293 16 308 308 562 96.0 1e-160 MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFSVQLFEKIGRRMCLTRE GKKLLPHIYELTRVMDTLREAAKKESDPDGELRVISGETLLSYRMPQVLQRFRQRAPKVR LSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRRELGEQPLALVASPQIADVDFTEP GRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIELISIESIKRCVAANIGVSYLPRF AVVKELKCGELIELPFGEQSQTITAMCAHHAGKAVSPAMHTFIQCVEECFLPG >gi|296918691|gb|GG773009.1| GENE 282 294631 - 295218 480 195 aa, chain + ## HITS:1 COG:yfiK KEGG:ns NR:ns ## COG: yfiK COG1280 # Protein_GI_number: 16130503 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli K12 # 1 195 1 195 195 328 99.0 3e-90 MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGI SFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQTKPISFWASFALQFVNVKI ILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNI VLALLLVYCAVRIFY >gi|296918691|gb|GG773009.1| GENE 283 295274 - 295657 529 127 aa, chain - ## HITS:1 COG:ECs3445 KEGG:ns NR:ns ## COG: ECs3445 COG3445 # Protein_GI_number: 15832699 # Func_class: R General function prediction only # Function: Acid-induced glycyl radical enzyme # Organism: Escherichia coli O157:H7 # 1 127 1 127 127 242 99.0 2e-64 MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGFAEDEVVAVSKLGDIEYREVPVE VKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIA RTFTESL >gi|296918691|gb|GG773009.1| GENE 284 295962 - 296651 581 229 aa, chain + ## HITS:1 COG:ung KEGG:ns NR:ns ## COG: ung COG0692 # Protein_GI_number: 16130505 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Escherichia coli K12 # 1 229 1 229 229 463 99.0 1e-130 MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVI LGQDPYHGPGQAHGLAFSVRPGIATPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVL LLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRH HVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMPVLPAESE >gi|296918691|gb|GG773009.1| GENE 285 296699 - 297736 1051 345 aa, chain - ## HITS:1 COG:ECs3447 KEGG:ns NR:ns ## COG: ECs3447 COG0566 # Protein_GI_number: 15832701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Escherichia coli O157:H7 # 1 345 1 345 345 667 99.0 0 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQHR DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI RTAEGGAEYVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA >gi|296918691|gb|GG773009.1| GENE 286 297943 - 298362 178 139 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|124485582|ref|YP_001030198.1| ribosomal protein L12E/L44/L45/RPP1/RPP2-like protein [Methanocorpusculum labreanum Z] # 55 136 35 115 120 73 46 1e-11 MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGETLDKLLKDDLPVVIDFW APWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVD MLNGAVPKAPFDSWLNESL >gi|296918691|gb|GG773009.1| GENE 287 298605 - 299129 332 174 aa, chain + ## HITS:1 COG:ECs3449 KEGG:ns NR:ns ## COG: ECs3449 COG3148 # Protein_GI_number: 15832703 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 174 67 240 240 338 98.0 4e-93 MFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLDLVQNPDYQPMVVFPASYADEQ REVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRLREAQAEG QYCTAEVAIALLDMAGDTRAATGLGEHFTRFKTRYLAGKTQHPGSITAEQLESV >gi|296918691|gb|GG773009.1| GENE 288 299161 - 301821 2237 886 aa, chain + ## HITS:1 COG:ZyfiQ_1 KEGG:ns NR:ns ## COG: ZyfiQ_1 COG1042 # Protein_GI_number: 15803112 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Escherichia coli O157:H7 EDL933 # 1 709 1 709 709 1357 98.0 0 MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAW PDIARLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMR LLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIAL GDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAP AALALDALWSRNGKLATLSEETCQKLRDALPGHVAISNPLDLRDDASSEHYVKTLDILLH SQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFSE AGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQHAIAEGATS LDTHEVQPILQAYGMNTLPTWIASNSTEAVHIAKQIGYPVALKLRSPDIPHKSEVQGVML YLRTANEVQQAANAIFDRVKMAWPQARVHGLLVQSMANRAGAQELRVVVEHDPVFGPLIM LGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQV SNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDIAPFEGDNESRLAVRPYPHQLEEWVEL KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMA FVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGL QRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLAQREES >gi|296918691|gb|GG773009.1| GENE 289 301935 - 303290 1298 451 aa, chain + ## HITS:1 COG:ECs3452 KEGG:ns NR:ns ## COG: ECs3452 COG1502 # Protein_GI_number: 15832706 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli O157:H7 # 1 431 2 432 452 877 100.0 0 MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKIASAKQRICIVALYLEQ DDGGKGILNALYEAKRQRPELDVRVLVDWHRAQRGRIGAAASNTNADWYCRMAQENPGVD VPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYLHQHDKYRYDRYHLIRNRKMS DIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLFRQELRDAAYHFQGDADNDQLSV TPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNLPAILVRNIIQLLREGKKVEIIVGD KTANDFYIPEDEPFKIIGALPYLYEINLRRFLSRLQYYVNTDQLVVRLWKDDDNTYHLKG MWVDDKWMLITGNNLNPRAWRLDLENAILIHDPQLELAPQREKELELIREHTTIVKHYRD LQSIADYPVKVRKLIRRLRRIRIDRLISRIL >gi|296918691|gb|GG773009.1| GENE 290 303336 - 303659 321 107 aa, chain + ## HITS:1 COG:STM2653 KEGG:ns NR:ns ## COG: STM2653 COG5544 # Protein_GI_number: 16765973 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Salmonella typhimurium LT2 # 1 107 1 107 107 157 76.0 6e-39 MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFG LMFSVSLGASKELWDSRPEGSGWSWKDFAWDIAGASTGYTVWQLTRH >gi|296918691|gb|GG773009.1| GENE 291 303656 - 304954 1059 432 aa, chain - ## HITS:1 COG:kgtP KEGG:ns NR:ns ## COG: kgtP COG0477 # Protein_GI_number: 16130512 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 432 1 432 432 746 98.0 0 MAESTVTADSKLTSSDTRRRIWAIVGASSGNLIEWFDFYVYSFCSLYFAHIFFPSGNTTT QLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCMMCFGSLVIACLPGYETIG TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV VVLQHTMEDAVLREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRALKEAGSLKGLWR NRRAFIMVLGFTAAASLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIG ALSDKIGRRTSMLCFGSLATIFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGIL KAEMFPAQVRALGVGLSYAVANAIFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVS LTLHRKGKGMRL >gi|296918691|gb|GG773009.1| GENE 292 305297 - 305515 144 72 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A4118 NR:ns ## KEGG: EcHS_A4118 # Name: not_defined # Def: IS621, transposase # Organism: E.coli_HS # Pathway: not_defined # 1 72 251 326 326 129 90.0 3e-29 MSKAGHVSLRRPLYMPAMVATSKTEWGRALAANGKKGKVILGSIMRKLAQVAYGVLKSGV PFDASRHNPVAA >gi|296918691|gb|GG773009.1| GENE 293 305611 - 305943 238 110 aa, chain - ## HITS:1 COG:all0306 KEGG:ns NR:ns ## COG: all0306 COG3547 # Protein_GI_number: 17227802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 1 107 103 209 320 56 30.0 1e-08 MLAEFCRQKRPAAWEAHHPLERALHALVVRHQALTDMHRQELNRTETAREVQRPSIDAHL LWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESIPGIGEKTSAVLLAYMV >gi|296918691|gb|GG773009.1| GENE 294 305859 - 306263 270 134 aa, chain - ## HITS:1 COG:NMB1750 KEGG:ns NR:ns ## COG: NMB1750 COG3547 # Protein_GI_number: 15677594 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 7 106 2 100 316 80 45.0 5e-16 MEHELHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELVSWLKCHKIDHAHICIE ATGTYMEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDTVDAACWQSSVVRSALQP GKRITRLNARCMPW >gi|296918691|gb|GG773009.1| GENE 295 306507 - 307109 338 200 aa, chain - ## HITS:1 COG:RSc2265 KEGG:ns NR:ns ## COG: RSc2265 COG2801 # Protein_GI_number: 17546984 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 195 71 265 269 232 58.0 4e-61 MQQLGLKSPVRLKKYRSYRGNMGLAAENILQRQFKAEAPCEKWVTDITEFRAGGQKLYLS PILDLFNGEIVAWETACRPTEELVKRMLNKGLESLAEGEKPLLHSDQGWHYRIKSYQSAL ADRGLVQSMSRKGNCLDNAVMENFFGHLKEEMYYRRDYRNVEELENAVNEYITYWNQKRI KLSLGGLSPVEYRTEYQKAG >gi|296918691|gb|GG773009.1| GENE 296 307334 - 307507 232 57 aa, chain - ## HITS:1 COG:no KEGG:E2348C_4254 NR:ns ## KEGG: E2348C_4254 # Name: not_defined # Def: transposase Orf1 of IS1397 # Organism: E.coli_0127 # Pathway: not_defined # 1 57 117 173 173 90 100.0 2e-17 MTRSDDTHENEANMTPEEMKNELRYLRAENAYLKAMQEHLLEKKRQELEKKRKSSRA >gi|296918691|gb|GG773009.1| GENE 297 307612 - 307854 73 80 aa, chain - ## HITS:1 COG:no KEGG:ECP_0414 NR:ns ## KEGG: ECP_0414 # Name: not_defined # Def: transposase and inactivated derivatives [DNA replication, recombination, and repair]; region: COG2963 # Organism: E.coli_536 # Pathway: not_defined # 1 49 1 49 173 104 100.0 1e-21 MKHSFEIKLAAVNHYLAGHAGIISTAKLFQLSHTSLSHWINLFLLHGPRHWIADTSVAIL LKINFAWFFMLSGILSLYPG Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:03:49 2011 Seq name: gi|296918690|gb|GG773010.1| Escherichia coli MS 110-3 genomic scaffold Scfld206, whole genome shotgun sequence Length of sequence - 175897 bp Number of predicted genes - 164, with homology - 162 Number of transcription units - 83, operones - 37 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . + CDS 417 - 785 268 ## ECS88_4642 antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage 3 1 Op 3 . + CDS 874 - 1251 277 ## ECS88_4641 toxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage 4 1 Op 4 . + CDS 1248 - 1793 95 ## ECS88_4640 hypothetical protein 5 1 Op 5 . + CDS 1793 - 2356 253 ## ECS88_4639 hypothetical protein + Term 2363 - 2415 1.3 + Prom 3432 - 3491 2.2 6 2 Tu 1 . + CDS 3533 - 4726 667 ## COG3710 DNA-binding winged-HTH domains + Term 4732 - 4769 4.0 7 3 Op 1 10/0.000 + CDS 5092 - 6426 1367 ## COG0531 Amino acid transporters + Term 6442 - 6497 3.0 8 3 Op 2 4/0.370 + CDS 6506 - 8653 2460 ## COG1982 Arginine/lysine/ornithine decarboxylases + Term 8661 - 8704 6.3 9 4 Tu 1 3/0.481 + CDS 8712 - 10169 1306 ## COG3104 Dipeptide/tripeptide permease + Prom 10264 - 10323 5.5 10 5 Tu 1 . + CDS 10406 - 11923 1683 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 11940 - 11975 6.7 - Term 11928 - 11963 6.7 11 6 Op 1 . - CDS 12042 - 12215 163 ## JW5732 hypothetical protein 12 6 Op 2 . - CDS 12243 - 12539 182 ## ECS88_4632 hypothetical protein - Prom 12629 - 12688 1.7 + Prom 12559 - 12618 3.5 13 7 Tu 1 . + CDS 12646 - 12837 183 ## gi|293407852|ref|ZP_06651692.1| predicted protein 14 8 Op 1 5/0.111 - CDS 12767 - 13039 359 ## COG2388 Predicted acetyltransferase 15 8 Op 2 . - CDS 13051 - 13281 214 ## COG3592 Uncharacterized conserved protein 16 8 Op 3 . - CDS 13336 - 13470 58 ## EcSMS35_4593 hypothetical protein + Prom 13379 - 13438 2.9 17 9 Op 1 9/0.037 + CDS 13462 - 15093 1440 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism 18 9 Op 2 3/0.481 + CDS 15090 - 15809 277 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 + Prom 16298 - 16357 2.9 19 10 Op 1 4/0.370 + CDS 16380 - 17720 1464 ## COG2704 Anaerobic C4-dicarboxylate transporter + Prom 17729 - 17788 5.4 20 10 Op 2 3/0.481 + CDS 17811 - 19457 503 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 21 11 Tu 1 . + CDS 19580 - 20230 636 ## COG3647 Predicted membrane protein + Term 20337 - 20374 3.5 22 12 Op 1 . - CDS 20227 - 21579 1283 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 23 12 Op 2 . - CDS 21672 - 21866 108 ## gi|300995348|ref|ZP_07181044.1| hypothetical protein HMPREF9553_04568 - Prom 22069 - 22128 1.7 24 13 Tu 1 . + CDS 21865 - 22773 862 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 22833 - 22892 8.6 25 14 Tu 1 . + CDS 22972 - 25239 2273 ## COG1982 Arginine/lysine/ornithine decarboxylases + Term 25357 - 25388 1.1 + Prom 25300 - 25359 6.2 26 15 Tu 1 . + CDS 25575 - 26336 370 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 26373 - 26432 3.9 27 16 Op 1 4/0.370 + CDS 26473 - 27339 1009 ## COG0531 Amino acid transporters 28 16 Op 2 3/0.481 + CDS 27378 - 27746 256 ## COG0531 Amino acid transporters + Term 27768 - 27815 8.2 29 17 Op 1 3/0.481 + CDS 27850 - 29493 1411 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 30 17 Op 2 40/0.000 + CDS 29490 - 30158 851 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 31 17 Op 3 . + CDS 30168 - 31259 839 ## COG0642 Signal transduction histidine kinase 32 18 Tu 1 . - CDS 31235 - 31324 96 ## - Prom 31346 - 31405 1.7 33 19 Tu 1 . - CDS 31436 - 32938 1653 ## COG0477 Permeases of the major facilitator superfamily - Prom 33068 - 33127 3.2 34 20 Op 1 . - CDS 33202 - 34080 354 ## ECS88_4611 hypothetical protein 35 20 Op 2 . - CDS 34077 - 36305 1789 ## COG0699 Predicted GTPases (dynamin-related) - Prom 36482 - 36541 8.5 36 21 Tu 1 . + CDS 36708 - 37043 440 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism + Prom 37119 - 37178 2.4 37 22 Tu 1 . + CDS 37203 - 37646 522 ## COG2764 Uncharacterized protein conserved in bacteria + Prom 37667 - 37726 4.5 38 23 Op 1 15/0.000 + CDS 37779 - 38567 264 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 39 23 Op 2 1/0.741 + CDS 38592 - 38906 389 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component 40 23 Op 3 8/0.037 + CDS 38955 - 39608 716 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component 41 24 Op 1 3/0.481 + CDS 39714 - 40493 838 ## COG3639 ABC-type phosphate/phosphonate transport system, permease component 42 24 Op 2 5/0.111 + CDS 40508 - 41239 630 ## COG2188 Transcriptional regulators 43 24 Op 3 9/0.037 + CDS 41240 - 41692 440 ## COG3624 Uncharacterized enzyme of phosphonate metabolism 44 24 Op 4 8/0.037 + CDS 41689 - 42273 564 ## COG3625 Uncharacterized enzyme of phosphonate metabolism 45 24 Op 5 8/0.037 + CDS 42273 - 43337 1148 ## COG3626 Uncharacterized enzyme of phosphonate metabolism 46 24 Op 6 7/0.037 + CDS 43330 - 44175 906 ## COG3627 Uncharacterized enzyme of phosphonate metabolism 47 24 Op 7 7/0.037 + CDS 44172 - 44930 377 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Prom 44942 - 45001 2.4 48 25 Op 1 6/0.037 + CDS 45041 - 45721 234 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 49 25 Op 2 7/0.037 + CDS 45718 - 46854 1125 ## COG3454 Metal-dependent hydrolase involved in phosphonate metabolism 50 25 Op 3 3/0.481 + CDS 46854 - 47177 313 ## COG3709 Uncharacterized component of phosphonate metabolism + Prom 47179 - 47238 40.6 51 26 Op 1 3/0.481 + CDS 47413 - 47847 563 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 52 26 Op 2 . + CDS 47849 - 48607 519 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 53 27 Op 1 . - CDS 48635 - 48964 271 ## ECS88_4592 hypothetical protein 54 27 Op 2 . - CDS 49033 - 49482 358 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 49717 - 49776 8.7 + Prom 49702 - 49761 6.7 55 28 Op 1 . + CDS 49841 - 50731 640 ## COG1737 Transcriptional regulators 56 28 Op 2 16/0.000 + CDS 50790 - 51725 936 ## COG1879 ABC-type sugar transport system, periplasmic component + Prom 51772 - 51831 2.0 57 28 Op 3 21/0.000 + CDS 51852 - 53384 176 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 58 28 Op 4 11/0.000 + CDS 53363 - 53608 355 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 59 28 Op 5 2/0.630 + CDS 53636 - 54343 706 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 60 28 Op 6 2/0.630 + CDS 54354 - 55049 832 ## COG0036 Pentose-5-phosphate-3-epimerase 61 28 Op 7 . + CDS 55033 - 55962 556 ## COG1940 Transcriptional regulator/sugar kinase + Prom 55975 - 56034 7.7 62 29 Tu 1 . + CDS 56237 - 58222 2175 ## COG2015 Alkyl sulfatase and related hydrolases + Term 58231 - 58271 6.2 + Prom 58248 - 58307 12.6 63 30 Op 1 . + CDS 58430 - 58705 195 ## ECS88_4582 hypothetical protein 64 30 Op 2 6/0.037 + CDS 58724 - 59755 1153 ## COG1566 Multidrug resistance efflux pump 65 30 Op 3 2/0.630 + CDS 59755 - 61806 1594 ## COG1289 Predicted membrane protein 66 30 Op 4 3/0.481 + CDS 61803 - 63269 1566 ## COG1538 Outer membrane protein + Term 63276 - 63314 5.1 + Prom 63346 - 63405 4.2 67 31 Op 1 5/0.111 + CDS 63467 - 63886 382 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 68 31 Op 2 . + CDS 63935 - 65614 1786 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 65669 - 65708 5.1 + Prom 65781 - 65840 4.9 69 32 Op 1 38/0.000 + CDS 65989 - 67557 1618 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 67577 - 67624 11.7 70 32 Op 2 49/0.000 + CDS 67657 - 68706 356 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 71 32 Op 3 44/0.000 + CDS 68706 - 69539 681 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 72 32 Op 4 17/0.000 + CDS 69532 - 70368 183 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 73 32 Op 5 . + CDS 70355 - 71059 445 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Prom 71087 - 71146 2.9 74 33 Tu 1 . + CDS 71191 - 71859 686 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Term 71974 - 72011 5.1 75 34 Tu 1 . - CDS 72007 - 73320 1619 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 73569 - 73628 7.7 76 35 Op 1 9/0.037 - CDS 73663 - 74259 698 ## COG4235 Cytochrome c biogenesis factor 77 35 Op 2 7/0.037 - CDS 74256 - 74639 380 ## COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes 78 35 Op 3 5/0.111 - CDS 74632 - 76236 1290 ## COG1138 Cytochrome c biogenesis factor 79 36 Op 1 8/0.037 - CDS 76370 - 77326 1137 ## COG3301 Formate-dependent nitrite reductase, membrane component 80 36 Op 2 . - CDS 77323 - 77994 447 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 81 36 Op 3 . - CDS 77991 - 78557 333 ## APECO1_2384 cytochrome c nitrite reductase pentaheme subunit 82 36 Op 4 . - CDS 78602 - 80038 1402 ## COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit - Prom 80088 - 80147 2.8 + Prom 80145 - 80204 7.0 83 37 Tu 1 . + CDS 80430 - 82388 2158 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases + Term 82518 - 82562 4.1 + Prom 82477 - 82536 5.3 84 38 Op 1 10/0.000 + CDS 82680 - 82994 307 ## COG3162 Predicted membrane protein 85 38 Op 2 . + CDS 82991 - 84640 2127 ## COG4147 Predicted symporter + Term 84650 - 84685 5.8 86 39 Op 1 23/0.000 - CDS 84679 - 85347 451 ## COG1346 Putative effector of murein hydrolase 87 39 Op 2 . - CDS 85361 - 85771 475 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 85798 - 85857 6.8 + Prom 85632 - 85691 3.6 88 40 Tu 1 . + CDS 85875 - 86759 599 ## COG0583 Transcriptional regulator + Term 86761 - 86806 8.8 - Term 86748 - 86788 8.3 89 41 Tu 1 . - CDS 86795 - 88417 1635 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Prom 88533 - 88592 3.8 - Term 88536 - 88579 9.2 90 42 Tu 1 . - CDS 88595 - 89944 1587 ## COG2252 Permeases - Prom 90105 - 90164 4.6 - Term 90463 - 90489 -0.7 91 43 Tu 1 . - CDS 90491 - 90955 507 ## COG0789 Predicted transcriptional regulators - Prom 90979 - 91038 5.6 + Prom 90941 - 91000 5.8 92 44 Tu 1 . + CDS 91041 - 91364 389 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 91370 - 91411 7.7 93 45 Tu 1 . - CDS 91367 - 92953 1028 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains - Prom 93101 - 93160 4.7 94 46 Tu 1 . + CDS 93382 - 93663 300 ## UTI89_C4646 hypothetical protein + Term 93670 - 93704 5.2 - Term 93661 - 93689 1.4 95 47 Tu 1 . - CDS 93762 - 94298 682 ## COG0629 Single-stranded DNA-binding protein - Prom 94325 - 94384 5.6 + Prom 94432 - 94491 4.9 96 48 Tu 1 . + CDS 94552 - 97374 3279 ## COG0178 Excinuclease ATPase subunit + Term 97398 - 97464 30.0 97 49 Op 1 4/0.370 - CDS 97464 - 97820 458 ## COG2315 Uncharacterized protein conserved in bacteria 98 49 Op 2 4/0.370 - CDS 97824 - 98240 363 ## COG0432 Uncharacterized conserved protein - Prom 98264 - 98323 3.3 99 50 Tu 1 . - CDS 98351 - 99064 541 ## COG3700 Acid phosphatase (class B) + Prom 99192 - 99251 5.0 100 51 Op 1 5/0.111 + CDS 99479 - 101161 923 ## COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system 101 51 Op 2 . + CDS 101154 - 102512 806 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - Term 102447 - 102494 -0.9 102 52 Op 1 . - CDS 102501 - 103574 842 ## COG2055 Malate/L-lactate dehydrogenases 103 52 Op 2 . - CDS 103586 - 105085 1507 ## COG0471 Di- and tricarboxylate transporters - Prom 105191 - 105250 6.4 - Term 105248 - 105278 1.0 104 53 Op 1 39/0.000 - CDS 105297 - 106169 888 ## COG0074 Succinyl-CoA synthetase, alpha subunit 105 53 Op 2 1/0.741 - CDS 106182 - 107351 1309 ## COG0045 Succinyl-CoA synthetase, beta subunit 106 53 Op 3 30/0.000 - CDS 107373 - 108791 678 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 107 53 Op 4 21/0.000 - CDS 108803 - 109957 1012 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 108 53 Op 5 . - CDS 109990 - 112734 1833 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes - Prom 112795 - 112854 2.8 - Term 112874 - 112905 4.1 109 54 Op 1 . - CDS 112916 - 114109 1239 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase 110 54 Op 2 1/0.741 - CDS 114191 - 115189 586 ## COG3172 Predicted ATPase/kinase involved in NAD metabolism 111 54 Op 3 . - CDS 115186 - 115743 196 ## COG3201 Nicotinamide mononucleotide transporter 112 54 Op 4 9/0.037 - CDS 115766 - 116845 971 ## COG0787 Alanine racemase 113 54 Op 5 . - CDS 116898 - 118313 1528 ## COG0305 Replicative DNA helicase - Term 118342 - 118383 8.4 114 54 Op 6 . - CDS 118386 - 119420 649 ## COG1609 Transcriptional regulators - Prom 119610 - 119669 11.9 + Prom 119594 - 119653 7.0 115 55 Op 1 3/0.481 + CDS 119676 - 121247 1315 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase 116 55 Op 2 . + CDS 121240 - 122019 709 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 117 55 Op 3 . + CDS 122110 - 123510 1020 ## COG0477 Permeases of the major facilitator superfamily 118 55 Op 4 . + CDS 123500 - 125548 923 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 119 56 Tu 1 . + CDS 125654 - 126637 763 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Term 126646 - 126679 4.1 - Term 126633 - 126666 4.1 120 57 Tu 1 . - CDS 126802 - 127044 377 ## ECP_4266 phage shock protein G (Phageshock_PspG); region: Phageshock_PspG; cl11511 - Prom 127071 - 127130 4.4 - Term 127112 - 127147 5.5 121 58 Tu 1 . - CDS 127178 - 128119 1103 ## COG0042 tRNA-dihydrouridine synthase - Prom 128208 - 128267 4.1 + Prom 128148 - 128207 2.9 122 59 Tu 1 . + CDS 128329 - 128844 466 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 123 60 Tu 1 . - CDS 128886 - 129095 351 ## COG3237 Uncharacterized protein conserved in bacteria - Prom 129147 - 129206 2.5 124 61 Op 1 1/0.741 - CDS 129211 - 130536 1418 ## COG0534 Na+-driven multidrug efflux pump - Term 130558 - 130597 8.9 125 61 Op 2 5/0.111 - CDS 130609 - 131217 638 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 131245 - 131304 8.2 - Term 131277 - 131314 -1.0 126 62 Tu 1 . - CDS 131327 - 131695 461 ## COG0818 Diacylglycerol kinase - Prom 131895 - 131954 4.3 + Prom 131636 - 131695 4.9 127 63 Tu 1 . + CDS 131806 - 134289 2696 ## COG2937 Glycerol-3-phosphate O-acyltransferase + Term 134408 - 134444 5.8 - Term 134400 - 134429 2.1 128 64 Op 1 6/0.037 - CDS 134442 - 135314 949 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 129 64 Op 2 . - CDS 135327 - 135824 527 ## COG3161 4-hydroxybenzoate synthetase (chorismate lyase) - Prom 135848 - 135907 4.4 - Term 135939 - 135970 3.2 130 65 Tu 1 . - CDS 136003 - 136923 824 ## ECS88_4511 maltose regulon periplasmic protein - Prom 136975 - 137034 2.2 - Term 137171 - 137215 4.4 131 66 Op 1 5/0.111 - CDS 137246 - 138583 1555 ## COG4580 Maltoporin (phage lambda and maltose receptor) 132 66 Op 2 . - CDS 138658 - 139773 1214 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 139821 - 139880 2.0 133 67 Op 1 19/0.000 + CDS 140138 - 141328 1495 ## COG2182 Maltose-binding periplasmic proteins/domains + Term 141393 - 141438 4.3 + Prom 141352 - 141411 7.3 134 67 Op 2 20/0.000 + CDS 141482 - 143026 1562 ## COG1175 ABC-type sugar transport systems, permease components 135 67 Op 3 . + CDS 143041 - 143931 1101 ## COG3833 ABC-type maltose transport systems, permease component + Term 143991 - 144047 -0.7 - Term 143752 - 143791 2.1 136 68 Tu 1 . - CDS 144041 - 144451 559 ## COG3223 Predicted membrane protein - Prom 144507 - 144566 1.7 - Term 144638 - 144672 -0.9 137 69 Op 1 . - CDS 144826 - 144987 58 ## UTI89_C4598 hypothetical protein 138 69 Op 2 . - CDS 144991 - 147087 2247 ## ECS88_4502 porin 139 69 Op 3 . - CDS 147087 - 147824 510 ## ECS88_4501 hypothetical protein 140 69 Op 4 . - CDS 147821 - 148459 704 ## ECS88_4500 lipoprotein - Term 148474 - 148501 0.1 141 70 Tu 1 . - CDS 148574 - 148816 203 ## - Prom 148974 - 149033 8.6 - Term 149227 - 149286 6.2 142 71 Tu 1 . - CDS 149314 - 150819 1832 ## COG0166 Glucose-6-phosphate isomerase - Prom 150870 - 150929 5.6 143 72 Tu 1 . + CDS 151523 - 152872 1309 ## COG0527 Aspartokinases + Term 152876 - 152926 11.0 + Prom 152944 - 153003 6.0 144 73 Tu 1 . + CDS 153125 - 153397 369 ## ECS88_4496 hypothetical protein 145 74 Tu 1 . - CDS 153398 - 154270 942 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 154363 - 154422 5.2 + Prom 154346 - 154405 6.0 146 75 Op 1 2/0.630 + CDS 154618 - 155565 972 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 147 75 Op 2 2/0.630 + CDS 155635 - 156441 197 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 148 75 Op 3 9/0.037 + CDS 156451 - 156858 322 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 149 75 Op 4 13/0.000 + CDS 156858 - 157352 536 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 150 75 Op 5 13/0.000 + CDS 157418 - 158215 921 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 151 75 Op 6 1/0.741 + CDS 158226 - 159050 811 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 152 75 Op 7 1/0.741 + CDS 159102 - 160331 1154 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Prom 160478 - 160537 3.4 153 76 Tu 1 . + CDS 160713 - 161402 881 ## COG3340 Peptidase E + Term 161409 - 161441 3.2 - Term 161359 - 161395 2.7 154 77 Tu 1 . - CDS 161492 - 163048 1527 ## COG1283 Na+/phosphate symporter - Prom 163210 - 163269 7.8 155 78 Op 1 . - CDS 163294 - 163743 260 ## ECS88_4485 hypothetical protein 156 78 Op 2 . - CDS 163786 - 164106 207 ## ECS88_4484 hypothetical protein - Term 164126 - 164156 2.1 157 78 Op 3 . - CDS 164166 - 167864 4184 ## COG1410 Methionine synthase I, cobalamin-binding domain - Prom 167994 - 168053 5.3 + Prom 167830 - 167889 3.7 158 79 Tu 1 . + CDS 168049 - 168873 767 ## COG1414 Transcriptional regulator 159 80 Op 1 5/0.111 - CDS 168890 - 170614 1278 ## COG4579 Isocitrate dehydrogenase kinase/phosphatase 160 80 Op 2 7/0.037 - CDS 170663 - 171967 1461 ## COG2224 Isocitrate lyase 161 80 Op 3 5/0.111 - CDS 171997 - 173598 1610 ## COG2225 Malate synthase - Prom 173722 - 173781 9.3 - Term 173793 - 173821 1.0 162 81 Tu 1 . - CDS 173867 - 174796 869 ## COG1897 Homoserine trans-succinylase - Prom 174918 - 174977 4.8 + Prom 174874 - 174933 3.5 163 82 Tu 1 . + CDS 174953 - 175396 286 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 164 83 Tu 1 . - CDS 175460 - 175843 283 ## UTI89_C4570 hypothetical protein Predicted protein(s) >gi|296918690|gb|GG773010.1| GENE 1 116 - 337 312 73 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4643 NR:ns ## KEGG: ECS88_4643 # Name: yeeT # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 73 1 73 73 150 100.0 1e-35 MKIITRGEAMRIHRQHPASRLFPFCTGKYRWHGSTDTYTGREVQDIPCVLAVFAERRKDS FGPYVRLMSVTLN >gi|296918690|gb|GG773010.1| GENE 2 417 - 785 268 122 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4642 NR:ns ## KEGG: ECS88_4642 # Name: yeeU # Def: antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage # Organism: E.coli_S88 # Pathway: not_defined # 1 122 1 122 122 253 100.0 2e-66 MSDTLPGTTLPDDNNDRTWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGRFSDADSY HLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCEADTLGSCGYVYMAVYPTPET KK >gi|296918690|gb|GG773010.1| GENE 3 874 - 1251 277 125 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4641 NR:ns ## KEGG: ECS88_4641 # Name: yeeV # Def: toxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage # Organism: E.coli_S88 # Pathway: not_defined # 1 125 1 125 125 252 100.0 3e-66 MKTLPVLPGQAASSRPSPVEIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC DAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNIILGKH PEVKQ >gi|296918690|gb|GG773010.1| GENE 4 1248 - 1793 95 181 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4640 NR:ns ## KEGG: ECS88_4640 # Name: yeeW # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 140 1 140 140 261 99.0 7e-69 MKLSLTPEADSVNVQALNMGRIVVDIDGVNLAELINKAAENGDSLRVVDDRDSTETPATY ASPHQLPEDNTVIQSVMPLTTETALDILIAWLQDNIDCGSGIIFNNDEDKTDSAALLPCI EQAREDIRTLHQLQLMHQNRRMLSRETHGGPPPPPPPPPPPPPPQRGGGGGFSFINRKET S >gi|296918690|gb|GG773010.1| GENE 5 1793 - 2356 253 187 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4639 NR:ns ## KEGG: ECS88_4639 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 187 1 187 187 382 100.0 1e-105 MSDITIPHPNAVNGHTAVICSTSIRHILAVRKSTLLQIDTLIRQLTEISALTENIGGKAA PDWAMKQNFRCGCWMMEKPETAMKAITRNLEREIWRNLMQRSGMFSLMDAQARDTGFRSL EYDNFPEISEANILSTFKQLHQNKDELFERGEINAFRGLSRDYKTRPPCKFSNKIIINNL VRWDRWG >gi|296918690|gb|GG773010.1| GENE 6 3533 - 4726 667 397 aa, chain + ## HITS:1 COG:cadC_1 KEGG:ns NR:ns ## COG: cadC_1 COG3710 # Protein_GI_number: 16131959 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Escherichia coli K12 # 1 65 116 180 180 103 98.0 4e-22 MLSSPPPIPEAVPATDSPSHSLNIQNTTTPPEQSPVKSKRFTTFWVWFFFLLSLGICVAL VAFSSLETRLPMSKSRILLNPRDIDINMVNKSCNSWSSPYQLSYAIGVGDLVATSLNTFS TFMVHDKINYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSVKLVDNADGSTMLDKRYVIT NGNQLAIQNDLLQSLSKALNQPWPQRMQEMLQQILPHRGALLTNFYQAHDYLLHGDDKSL DRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLT AFNLRPGANTLYWIENGIFQTSVPYVVPYLDKFLASE >gi|296918690|gb|GG773010.1| GENE 7 5092 - 6426 1367 444 aa, chain + ## HITS:1 COG:ECs5114 KEGG:ns NR:ns ## COG: ECs5114 COG0531 # Protein_GI_number: 15834368 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 761 100.0 0 MSSAKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWIISIIGAMSLAYVYARL ATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDPVP AGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFDAATYAANWNT ADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVYIAATQ VLSGMYPSSVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRA ANDGNFPKVYGEVDSNGIPKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIAVL LTMLPYFYSCVDLIRFEGVNIRNFVSLICSVLGCVFCFIALMGASSFELAGTFIVSLIIL MFYARKMHERQSHSMDNHTASNAH >gi|296918690|gb|GG773010.1| GENE 8 6506 - 8653 2460 715 aa, chain + ## HITS:1 COG:ECs5113 KEGG:ns NR:ns ## COG: ECs5113 COG1982 # Protein_GI_number: 15834367 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 715 1 715 715 1493 99.0 0 MNVIAILNHMGVYFKEEPIRELHRALERLNFQIVYPNDRDDLLKLIENNARLCGVIFDWD KYNLELCEEISKMNENLPLYAFANTYSTLDVSLNDLRLQISFFEYALGAADDIANKIKQT TDEYINTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDI SISVSELGSLLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILI DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVH AVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIY ETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA GKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNID NEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIG IDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHH NLPDLMYRAFEVLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINANMILPYPPGVPLVM PGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEESKK >gi|296918690|gb|GG773010.1| GENE 9 8712 - 10169 1306 485 aa, chain + ## HITS:1 COG:yjdL KEGG:ns NR:ns ## COG: yjdL COG3104 # Protein_GI_number: 16131956 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 485 1 485 485 882 99.0 0 MKTPSQPRAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDNHAISLFSAYASLVYVT PILGGWLADRLLGNRTAVIAGALLMTLGHVVLGIDTNSTFSLYLALAIIICGYGLFKSNI SCLLGELYDENDHRRDGGFSLLYAAGNIGSIAAPIACGLAAQWYGWHVGFALAGGGMFIG LLIFLSGHRHFQSTRSMDKKALTSVKFALPVWSWLVVMLCLAPVFFTLLLENDWSGYLLA IVCLIAAQIIARMMIKFPEHRRALWQIVLLMFVGTLFWVLAQQGGSTISLFIDRFVNRQA FNIEVPTALFQSVNAIAVMLAGVVLAWLASPESRGNSALRVWLKFAFGLLLMACGFMLLA FDARHAAAGGQASMGVMISGLALMGFAELFIDPVAIAQITRLKMSGVLTGIYMLATGAVA NWLAGVVAQQTTESQISGMAIAAYQRFFSQMGEWTLACVAIIVVLAFATRFLFSTPTNMI QESND >gi|296918690|gb|GG773010.1| GENE 10 10406 - 11923 1683 505 aa, chain + ## HITS:1 COG:ECs5111 KEGG:ns NR:ns ## COG: ECs5111 COG1190 # Protein_GI_number: 15834365 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Escherichia coli O157:H7 # 1 505 1 505 505 998 99.0 0 MSERETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQE LESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGD IIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKS RQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRT LAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGI TVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG REIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID RMIMLFTNSHTIRDVILFPAMRPQK >gi|296918690|gb|GG773010.1| GENE 11 12042 - 12215 163 57 aa, chain - ## HITS:1 COG:no KEGG:JW5732 NR:ns ## KEGG: JW5732 # Name: yjdO # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 57 1 57 57 68 100.0 7e-11 MALFSKILIFYVIGVNISFVIIWFISHEKTHIRLLSAFLVGITWPMSLPVALLFSLF >gi|296918690|gb|GG773010.1| GENE 12 12243 - 12539 182 98 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4632 NR:ns ## KEGG: ECS88_4632 # Name: yjdK # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 98 1 98 98 171 100.0 7e-42 MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTS LAASEIEDLIRLKCLDLPDIDFDLSIMTVDDYFRQFYK >gi|296918690|gb|GG773010.1| GENE 13 12646 - 12837 183 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293407852|ref|ZP_06651692.1| ## NR: gi|293407852|ref|ZP_06651692.1| predicted protein [Escherichia coli B354] predicted protein [Escherichia coli B354] # 1 63 1 63 63 112 93.0 7e-24 MTWDKKTLSLTILCASPYPSDALLHHTAESMKNIVTLYSPINCEYHHTPVFYQIRVSQMG IVG >gi|296918690|gb|GG773010.1| GENE 14 12767 - 13039 359 90 aa, chain - ## HITS:1 COG:ECs5109 KEGG:ns NR:ns ## COG: ECs5109 COG2388 # Protein_GI_number: 15834363 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 163 100.0 8e-41 MEIREGHNKFYINDEQGKQIAEIVFVPTGENLAIIEHTDVDESLKGQGIGKQLVAKVVEK MRREKRKIIPLCPFAKHEFDKTREYDDIRS >gi|296918690|gb|GG773010.1| GENE 15 13051 - 13281 214 76 aa, chain - ## HITS:1 COG:ECs5108 KEGG:ns NR:ns ## COG: ECs5108 COG3592 # Protein_GI_number: 15834362 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 76 1 76 76 159 97.0 2e-39 MDRALLDGGYRCYTGENIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVATVV KVIDTCPSGALKYRHK >gi|296918690|gb|GG773010.1| GENE 16 13336 - 13470 58 44 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_4593 NR:ns ## KEGG: EcSMS35_4593 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 44 1 44 44 79 100.0 4e-14 MSHQLPCVTNFLSIISDEAGNSKGVRMIGYIGEETLATETASAV >gi|296918690|gb|GG773010.1| GENE 17 13462 - 15093 1440 543 aa, chain + ## HITS:1 COG:ECs5107 KEGG:ns NR:ns ## COG: ECs5107 COG3290 # Protein_GI_number: 15834361 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Escherichia coli O157:H7 # 1 543 1 543 543 1070 99.0 0 MRHSLPYRMLRKRPMKLSTTVILMVSAVLFSVLLVVHLIYFSQISDMTRDGLANKALAVA RTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPF KGDDILKALNGEENVAINRGFLAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQINDSR WSIIWSVLFGMLVGLIGTCILVNVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDD RGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRL LLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHEFMNKLHVILG LLHLKSYKQLEDYILKTANNYQEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSE SQLPDSGSEDQVATLITTLGNLIENALEALGPEPGGEISVTLHYRHGWLHCEVNDDGPGI APDKIDHIFDKGVSTKGSERGVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWDGER SNR >gi|296918690|gb|GG773010.1| GENE 18 15090 - 15809 277 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 2 225 1 222 226 111 36 2e-23 MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQ KENGLDLLPVLHNARCKSDVIVISSAADAVTIKDSLHYGVVDYLIKPFQASRFEEALTGW RQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFS TDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ >gi|296918690|gb|GG773010.1| GENE 19 16380 - 17720 1464 446 aa, chain + ## HITS:1 COG:ECs5105 KEGG:ns NR:ns ## COG: ECs5105 COG2704 # Protein_GI_number: 15834359 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 446 1 446 446 743 100.0 0 MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQPGKPPVDVMLVIIAVVA ASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTILCGTGHVVYTILPIIYDV AIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLGNVTFDGRHLEFLDLLAITIP STLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREYVYGDTATLLDKKLPKSNWLAMW IFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMFMLLTGALIIILTKTNPASISKNEV FRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLGEMVKEYPWAYAIVLLLVSKFVNSQAA ALAAIVPVALAIGVDPAYIVASAPACYGYYILPTYPSDLAAIQFDRSGTTHIGRFVINHS FILPGLIGVSVSCVFGWIFAAMYGFL >gi|296918690|gb|GG773010.1| GENE 20 17811 - 19457 503 548 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 69 531 31 482 508 198 32 2e-49 MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEPEALTLLAQQAFHDASF MLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVLPTCQDTGTAIIVGKKGQR VWTGGGDEEALSKGVYNTYIEDNLRYSQNAPLDMYKEVNTGTNLPAQIDLYAVDGDEYKF LCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAET NLKTVKLASAHYYDELPTEGNEHGQAFRDIQLEQELLEEAQKLGLGAQFGGKYFAHDIRV IRLPRHGASCPVGMGVSCSADRNIKAKINREGIWIEKLEHNPGQYIPEELRQAGEGEAVK VDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLKELIDAGKELPQYIKDHPIY YAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACHKHGGF YLGSIGGPAAVLAQQSIKHLECVAYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVN KQCANCTK >gi|296918690|gb|GG773010.1| GENE 21 19580 - 20230 636 216 aa, chain + ## HITS:1 COG:ECs5103 KEGG:ns NR:ns ## COG: ECs5103 COG3647 # Protein_GI_number: 15834357 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 208 1 208 209 393 99.0 1e-109 MTRTLKPLILNTGALALTLILIYTGISAHDKLTWLMEVTPVIIVVPLLLATAKRYPLTPL LYTLIFFHAIILMVGGQYTYAKVPVGFEVQEWLGLSRNPYDKLGHFFQGLVPALVAREIL VRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQGADDFLGTQGDPWDTQSDMF CALLGALTTVIFLARFHCRQLRRFGLITRAPEAITP >gi|296918690|gb|GG773010.1| GENE 22 20227 - 21579 1283 450 aa, chain - ## HITS:1 COG:ECs5101 KEGG:ns NR:ns ## COG: ECs5101 COG1486 # Protein_GI_number: 15834355 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 # 1 450 2 451 451 954 99.0 0 MSAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAG ASGKITCHTQQKEALQDADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIM RALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAE ELARDLNIDPATLRYRCAGINHMAFYLELERKTADGSYVNLYPELLAAYEAGQAPKPNIH GNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIERYKVPLDEYPKRCVE QLANWHKELEEYKNASRIDIKPSREYASTIMNAIWTGEPSVIYGNVRNDGLIDNLPQGCC VEVACLVDANGIQPTKAGTLPSHLAALMQTNINVQTLLTEAILTENRDRVYHAAMMDPHT AAVLGIDEIYALVDDLIAAHGDWLPGWLHR >gi|296918690|gb|GG773010.1| GENE 23 21672 - 21866 108 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300995348|ref|ZP_07181044.1| ## NR: gi|300995348|ref|ZP_07181044.1| hypothetical protein HMPREF9553_04568 [Escherichia coli MS 200-1] hypothetical protein HMPREF9553_04568 [Escherichia coli MS 200-1] hypothetical protein UM146_20830 [Escherichia coli UM146] hypothetical protein HMPREF9539_02095 [Escherichia coli MS 110-3] hypothetical protein HMPREF9533_00125 [Escherichia coli MS 60-1] # 1 64 1 64 64 130 100.0 4e-29 MDDSLSWNIRIMAGVREDDCEQAHGFIPLPGGARRADEKIWVDYSAFQVIYSHKLRSIDV PLRI >gi|296918690|gb|GG773010.1| GENE 24 21865 - 22773 862 302 aa, chain + ## HITS:1 COG:melR KEGG:ns NR:ns ## COG: melR COG2207 # Protein_GI_number: 16131944 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 302 1 302 302 605 99.0 1e-173 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM VIKSLATQQLSPFEVRRWQQELNSQNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF PG >gi|296918690|gb|GG773010.1| GENE 25 22972 - 25239 2273 755 aa, chain + ## HITS:1 COG:adiA KEGG:ns NR:ns ## COG: adiA COG1982 # Protein_GI_number: 16131943 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli K12 # 1 755 2 756 756 1598 99.0 0 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFS YQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMDRDLLELVDEFAWILEDTA DFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDY YGENLFRTDMGIERTSLGSLLDHTGAFGESERYAARVFGADRSWSVVVGTSGSNRTIMQA CMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKIS ESPLTKDKVGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY ADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHAT TSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWN KEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILA PGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCS FKRHYDANTPLAQVMPELVEQYPDTYANIGIHDLGDTMFAWLKENNPGARLNEAYSGLPV AEITPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSY LRSLQSWDHHFPGFEHETEGTEIIDGIYHVMCVKA >gi|296918690|gb|GG773010.1| GENE 26 25575 - 26336 370 253 aa, chain + ## HITS:1 COG:ECs5098 KEGG:ns NR:ns ## COG: ECs5098 COG2207 # Protein_GI_number: 15834352 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 493 100.0 1e-139 MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISH DIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRA LLFTVLSRFLDSKKFLSLMMYMLRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLK KKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTP LHYVSQHRERTVA >gi|296918690|gb|GG773010.1| GENE 27 26473 - 27339 1009 288 aa, chain + ## HITS:1 COG:ECs5097 KEGG:ns NR:ns ## COG: ECs5097 COG0531 # Protein_GI_number: 15834351 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 286 1 286 445 495 100.0 1e-140 MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVY AKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA AWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV LSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCSS >gi|296918690|gb|GG773010.1| GENE 28 27378 - 27746 256 122 aa, chain + ## HITS:1 COG:ECs5097 KEGG:ns NR:ns ## COG: ECs5097 COG0531 # Protein_GI_number: 15834351 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 122 324 445 445 221 99.0 2e-58 MAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKA RPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPIS KD >gi|296918690|gb|GG773010.1| GENE 29 27850 - 29493 1411 547 aa, chain + ## HITS:1 COG:ZyjdB KEGG:ns NR:ns ## COG: ZyjdB COG2194 # Protein_GI_number: 15804706 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli O157:H7 EDL933 # 1 547 11 557 557 1065 98.0 0 MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDSLHNVLVFLSMPVVAFS VINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDRSMIANIIDTTPAESYALM TPQMLLTLGFSGVLAALIACWIKIKPTTSRLRSVLFRGANILISVLLILLVAALFYKDYA SLFRNNKELVKSLSPSNSIVASWSWYSHQRSANLPLIRIGEDAHRNPLMQNGKRKNLTIL IVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTASCGTATAVSVPCMFSDMPREHYKE ELAQHQEGVLDIIQRAGINVLWNDNDGGCKGVCDRVPHQNVTALNLPGQCINGECYDEVL FHGLEEYINNLQSDGLIVLHTIGSHGPTYYNRYPPQFRKFTPTCDTNEIQTCTQEQLVNT YDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGLPYAIAPDSQK QVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQ TCRRVSE >gi|296918690|gb|GG773010.1| GENE 30 29490 - 30158 851 222 aa, chain + ## HITS:1 COG:ECs5095 KEGG:ns NR:ns ## COG: ECs5095 COG0745 # Protein_GI_number: 15834349 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 426 98.0 1e-119 MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARMAEQSLEAGHYSLVVLDLGLPDEDGL HFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRRHN NQGESELNVGNLTLNMGRRQVWMSGEELILTPKEYALLSRLMLKAGSPVHREILYNDIYN WDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVANEEN >gi|296918690|gb|GG773010.1| GENE 31 30168 - 31259 839 363 aa, chain + ## HITS:1 COG:ECs5094 KEGG:ns NR:ns ## COG: ECs5094 COG0642 # Protein_GI_number: 15834348 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 363 1 363 363 675 99.0 0 MRFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQIQLFEQALRDNRNNDRHIMR EIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQKELEARTADNLTPIAIHSATL EIDAVVSALNDLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKTHHIDVAPLV ARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPE SAADITVQGDATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDGGAVMAVEDEGPGIDESK CGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAWIRLKKDQYVA NQI >gi|296918690|gb|GG773010.1| GENE 32 31235 - 31324 96 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNRVYESLTTVFSVLVVSSFLYIWFATY >gi|296918690|gb|GG773010.1| GENE 33 31436 - 32938 1653 500 aa, chain - ## HITS:1 COG:ECs5093 KEGG:ns NR:ns ## COG: ECs5093 COG0477 # Protein_GI_number: 15834347 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 500 1 500 500 975 99.0 0 MLKRKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGAD PSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYD TIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGA GVVVLISTIVGEENFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDRE GLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLI IIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVALFVLAIPAFILINSNVIGLIFAGLLM LAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESSQNLMMP AYYLMVVAVVGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHYDNIEQKIDDIDHE IADLQAKRTRLVQQHPRIDE >gi|296918690|gb|GG773010.1| GENE 34 33202 - 34080 354 292 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4611 NR:ns ## KEGG: ECS88_4611 # Name: yjcZ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 292 1 292 292 563 100.0 1e-159 MTKTLLDGPGRVLESVHPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNG GMLNAPLSLRLTLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIVDLY EWFSARCRWKEKALTQRGLLVQAGEQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAF GDACRLGRPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVSTGGEHADFL SWLGKWSTADKQPVCWSVTQRWRTVALGMPRLCSAQRLAGAMVEEIFSVNLV >gi|296918690|gb|GG773010.1| GENE 35 34077 - 36305 1789 742 aa, chain - ## HITS:1 COG:yjdA_1 KEGG:ns NR:ns ## COG: yjdA_1 COG0699 # Protein_GI_number: 16131935 # Func_class: R General function prediction only # Function: Predicted GTPases (dynamin-related) # Organism: Escherichia coli K12 # 1 275 1 275 275 506 98.0 1e-143 MYTQTLYELSQEAERLLQLSRQQLQLLEKMPLSVPGDDAPQLALPWSQPNIAERHAMLNN ELRKISRLEMVLAIAGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVL HFSHVAPIDHLIQQLQQRLRDCDIKHLTDVLEIDKDMRALMQRIENGIAFEKYYLGAQPI FHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGP NEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFD QQDRNSDDADQVRALISGTLMKGCITPQQIFPVSSMWGYLANRARHELANNGKLPPPEQQ RWVEDFAHAALGRRWRHADLADLEHIRHAADQLWEDSLFAQPIQALLHAAYANASLYALR SAAHKLLNYAQQAREYLDFRAHGLNVACEQLQQNIHQVEESLQLLQLNQAQVSGEIKHEI ELALTSTNHFLRQQQDAVNAQLAALFQDDSESLSEMRTRCETLLQTAQNTISRDFTLRFA ELESTLCRVLTDVIRPIEQQVKMELSESGFRPGFHFPVFHGVVPHFNTRQLFSDAISRQE ATDEQITRFGVVREIFSRWLNQPDWGRGNEKFPTETVDYSVLQRALSAEVDLYCQQMAKV MAEQVDESVTAGMNTFFAEFASCLTELQTRLRESLALRQQNESVVRLMQQQLQQTVMTHG WIYTDAQLLRDDIQTLFTAERY >gi|296918690|gb|GG773010.1| GENE 36 36708 - 37043 440 111 aa, chain + ## HITS:1 COG:ECs5090 KEGG:ns NR:ns ## COG: ECs5090 COG2824 # Protein_GI_number: 15834344 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 216 100.0 8e-57 MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDAEPAQESDELIVKDANGNLLADGDSVTI IKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN >gi|296918690|gb|GG773010.1| GENE 37 37203 - 37646 522 147 aa, chain + ## HITS:1 COG:ECs5089 KEGG:ns NR:ns ## COG: ECs5089 COG2764 # Protein_GI_number: 15834343 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 297 100.0 5e-81 MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIA HANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETF WAHGFGKVTDKFGVPWMINVVKQQPTQ >gi|296918690|gb|GG773010.1| GENE 38 37779 - 38567 264 262 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 231 1 214 305 106 31 8e-22 MQTIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSV GSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRT CFSYFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPI ASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGCSQQF DNERFDHLYRSINRVEENAKAA >gi|296918690|gb|GG773010.1| GENE 39 38592 - 38906 389 104 aa, chain + ## HITS:1 COG:phnD KEGG:ns NR:ns ## COG: phnD COG3221 # Protein_GI_number: 16131931 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 104 1 104 338 200 98.0 5e-52 MNAKIIASLAFTSMFSLSTLLNPAYAEEQEKALNFGIISTESQQNLKPQWTPFLQDMEKK LGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRANG >gi|296918690|gb|GG773010.1| GENE 40 38955 - 39608 716 217 aa, chain + ## HITS:1 COG:phnD KEGG:ns NR:ns ## COG: phnD COG3221 # Protein_GI_number: 16131931 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 217 122 338 338 399 98.0 1e-111 MLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVPGYYVFAKNNISASDFKRTVNA GHETNALAVANKQVDVATNNTENLDKLKTSAPEKLKELKVIWKSPLIPGDPIVWRKNLSE TTKDKIYDFFMNYGKTPEEKAVLERLGWAPFRASSDLQLVPIRQLALFKEMQSVKDNKGL NEQDKLAKTTAIQAQLDDLDRLNNALSAMSSVSKAVQ >gi|296918690|gb|GG773010.1| GENE 41 39714 - 40493 838 259 aa, chain + ## HITS:1 COG:ECs5086 KEGG:ns NR:ns ## COG: ECs5086 COG3639 # Protein_GI_number: 15834340 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 259 18 276 276 463 98.0 1e-130 MQTITIAPPKRSWFSLLSWAVVIAVLVVSWQGAEMAPLTLIKDGGNMATFAADFFPPDFS QWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWWVYQPVRRLMDACRAINEI VFAMLFVVAVGLGPFAGVLALFIHTTGVLSKLLSEAVEAIEPGPVEGIRATGANKLEEIL YGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIGVTLWEAIRGFQFQQTCALMVLI IVTVSLLDFLSQRLRKHFI >gi|296918690|gb|GG773010.1| GENE 42 40508 - 41239 630 243 aa, chain + ## HITS:1 COG:phnF KEGG:ns NR:ns ## COG: phnF COG2188 # Protein_GI_number: 16131928 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 3 243 1 241 241 466 99.0 1e-131 MAMHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAARFEVNRHTLRRAIDQ LVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPTSEKLLSVLRPASGHVA DALGITEGENVIHLRTLRRVNGVALCLIDHYFADLTLWPTLQRFDSGSLHDFLREQTGIT LRRSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDGESSPAEYSVSLTRADMIEFT MEH >gi|296918690|gb|GG773010.1| GENE 43 41240 - 41692 440 150 aa, chain + ## HITS:1 COG:ECs5084 KEGG:ns NR:ns ## COG: ECs5084 COG3624 # Protein_GI_number: 15834338 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 259 97.0 1e-69 MHADTATRQHWMSVLAHSQPAELAARLNALNINADYEVIRAAETGLVQIQARMGGTGERF FAGDATLTRAAVRLTDGTLGYSWVLGRDKQHAERCALIDALMQQNRHFQNLSETLITPLD ADRMARIAARQAEVNASRVDFFTMVRGDNA >gi|296918690|gb|GG773010.1| GENE 44 41689 - 42273 564 194 aa, chain + ## HITS:1 COG:phnH KEGG:ns NR:ns ## COG: phnH COG3625 # Protein_GI_number: 16131926 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli K12 # 1 194 1 194 194 347 96.0 9e-96 MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDT PVWLAAPLSNDIVNQSLRFHTNAPLVNQPKQATFAVTDEAISSEQLNALSTGTAVAPEAG ATLILQVTSLSGGRMLRLTGAGIAEERMIAPQLPKCILHELTERPHPFPLGIDLILTCGE RLLAIPRTTHVEVC >gi|296918690|gb|GG773010.1| GENE 45 42273 - 43337 1148 354 aa, chain + ## HITS:1 COG:phnI KEGG:ns NR:ns ## COG: phnI COG3626 # Protein_GI_number: 16131925 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli K12 # 1 354 1 354 354 679 98.0 0 MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELA ALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAIYKDIPGGQLLGP TYDYTHRLLDFTLLANGETPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITR TPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDIFIVPEELG FAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYG EHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEQNHG >gi|296918690|gb|GG773010.1| GENE 46 43330 - 44175 906 281 aa, chain + ## HITS:1 COG:ECs5081 KEGG:ns NR:ns ## COG: ECs5081 COG3627 # Protein_GI_number: 15834335 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 281 1 281 281 572 99.0 1e-163 MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVI GESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATLIQTRHRIPETPLTEDQI IIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGR YVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQNEAKSQ >gi|296918690|gb|GG773010.1| GENE 47 44172 - 44930 377 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 19 251 36 267 329 149 35 6e-35 MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQQG EIRYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGERLMATGARHYGD IRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMDEPTGGLDVSV QARLLDLLRGLVMELNLAVVIVTHDLGVARLLADRLLVMKQGKVVESGLTDRVLDDPHHP YTQLLVSSVLQN >gi|296918690|gb|GG773010.1| GENE 48 45041 - 45721 234 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 219 1 209 245 94 30 2e-18 MINVQNVSKTFILHQQNGVRLPVLQGASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLP DEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGV PREACAAKAARLLTHLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASL DAKNSAAVVELIREAKARGAAIVGIFHDETVREQVADRLHPMGVSS >gi|296918690|gb|GG773010.1| GENE 49 45718 - 46854 1125 378 aa, chain + ## HITS:1 COG:ECs5078 KEGG:ns NR:ns ## COG: ECs5078 COG3454 # Protein_GI_number: 15834332 # Func_class: P Inorganic ion transport and metabolism # Function: Metal-dependent hydrolase involved in phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 726 97.0 0 MIINNVKLVLENEVVHGSLEMQDGEIRAFAESQSHLSEAMDGEGGWLLPGLIELHTDNLD KFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAIEE TQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQRELVTLVSLMDHSPGQRQFANREKYRE YYQGKYSLTDAQMQQYEEEQLALAARWSQPNRETIAAMCRARHIALASHDDATHAHVAES HQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVRGGSHSGNVAASELAQLGLLDILSS DYYPASLLDAAFRVADDESNRFTLPQAVKLVTKNPAQALNLQDRGVIGEGKRADLVLAHR KGNHIHIDHVWRQGKRVF >gi|296918690|gb|GG773010.1| GENE 50 46854 - 47177 313 107 aa, chain + ## HITS:1 COG:ECs5077 KEGG:ns NR:ns ## COG: ECs5077 COG3709 # Protein_GI_number: 15834331 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized component of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 103 1 103 185 195 94.0 2e-50 MTGKLIWLMGASGSGKDSLLTELRQREQTQLLVAHRYITRDASAGSENHIALSEQEFFTR AGQNLLALSWHANGLYYGVGIEIDLWLHAGFDVVVNGSRAHLPPLAS >gi|296918690|gb|GG773010.1| GENE 51 47413 - 47847 563 144 aa, chain + ## HITS:1 COG:phnO KEGG:ns NR:ns ## COG: phnO COG0454 # Protein_GI_number: 16131919 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 144 1 144 144 283 99.0 5e-77 MPACELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVG MIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVK RHDAHRFYLREGYEQSHFRFTKAL >gi|296918690|gb|GG773010.1| GENE 52 47849 - 48607 519 252 aa, chain + ## HITS:1 COG:ECs5075 KEGG:ns NR:ns ## COG: ECs5075 COG1235 # Protein_GI_number: 15834329 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 515 96.0 1e-146 MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHDL ADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDTIPVYGPPDEQGCDDLFKHPGLLDFS HTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQ PQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDAWLMENALPSGF EAGFDGMDIEVA >gi|296918690|gb|GG773010.1| GENE 53 48635 - 48964 271 109 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4592 NR:ns ## KEGG: ECS88_4592 # Name: yjdP # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 109 1 109 109 85 100.0 5e-16 MKRFPLFLLFTLLTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQRQV SDDRRKQYNDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERRMEDEYGR >gi|296918690|gb|GG773010.1| GENE 54 49033 - 49482 358 149 aa, chain - ## HITS:1 COG:rpiB KEGG:ns NR:ns ## COG: rpiB COG0698 # Protein_GI_number: 16131916 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Escherichia coli K12 # 1 149 1 149 149 281 97.0 4e-76 MKKIAFGCDHVGFILKHEIVAHLVERDVEVIDKGTWSLERTDYPHYASQVALAVAGGEAD GGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQHNDTNVLAFGSRVVGLELAKMI VDAWLGAQYEGGRHQQRVEAITAIEQQRN >gi|296918690|gb|GG773010.1| GENE 55 49841 - 50731 640 296 aa, chain + ## HITS:1 COG:rpiR KEGG:ns NR:ns ## COG: rpiR COG1737 # Protein_GI_number: 16131915 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 296 12 307 307 588 100.0 1e-168 MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVS EAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIM EGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMM MSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSP APETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK >gi|296918690|gb|GG773010.1| GENE 56 50790 - 51725 936 311 aa, chain + ## HITS:1 COG:alsB KEGG:ns NR:ns ## COG: alsB COG1879 # Protein_GI_number: 16131914 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 311 1 311 311 560 99.0 1e-159 MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD NLKKAGGNVEGFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK TGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE FKLVDSILVTQ >gi|296918690|gb|GG773010.1| GENE 57 51852 - 53384 176 510 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 279 494 25 222 309 72 25 1e-11 MATPYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKG TITINNINYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWR EMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKE VDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSNDDIVRL MVGRELQNRFNAMKENVSNLAHDTVFEVRNVTSRDRKKVRDISFSVCRGEILGFAGLVGS GRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQ NMAISCSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLI SKWLCCRPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIA VFCEGRLTQILTNRDDMSEEEIMAWALPHE >gi|296918690|gb|GG773010.1| GENE 58 53363 - 53608 355 81 aa, chain + ## HITS:1 COG:alsC KEGG:ns NR:ns ## COG: alsC COG1172 # Protein_GI_number: 16131912 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 81 1 81 326 136 98.0 8e-33 MGFTTRVKSEASEKKPFNFALFWDKYGTFFILAIIVAIFGSLSSEYFLTTNNITQIFVQS SVTVLIGMGEFFAILVAGIDL >gi|296918690|gb|GG773010.1| GENE 59 53636 - 54343 706 235 aa, chain + ## HITS:1 COG:alsC KEGG:ns NR:ns ## COG: alsC COG1172 # Protein_GI_number: 16131912 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 235 92 326 326 353 98.0 1e-97 MVTAKLMLAGIDPFLAALIGGVLVGGALGAINGCLVNWTGLHPFSITLGTNAIFRGITLV ISDANSVYGFSFDFVNFFAASVIGIPVPVIFSLIVALILWFLTTRMRLGRNIYALGGNKN SAFYSGIDVKFHILVVFIISGVCAGLAGVVSTARLGAAEPLAGMGFETYAIASAIIGGTS FFGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLIIAAVALDRLISK >gi|296918690|gb|GG773010.1| GENE 60 54354 - 55049 832 231 aa, chain + ## HITS:1 COG:alsE KEGG:ns NR:ns ## COG: alsE COG0036 # Protein_GI_number: 16131911 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Escherichia coli K12 # 1 231 1 231 231 468 98.0 1e-132 MKISPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPL DCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPVE AMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQAT YEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQILAAKSEVQPHAKTA >gi|296918690|gb|GG773010.1| GENE 61 55033 - 55962 556 309 aa, chain + ## HITS:1 COG:alsK KEGG:ns NR:ns ## COG: alsK COG1940 # Protein_GI_number: 16131910 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli K12 # 1 309 1 309 309 634 97.0 0 MQKQHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPDLVSGIGEMIDEQLRRF NARCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQL SWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGN PGCLETNCSGMALRRWYEQQPRNYPLSDLFVHAENAPFVQSLLENAARAIATSINLFDPD AVILGGGVMDMPAFPPETLIAMTQKYLRRPLPYQVVRFIAASSSDFNGAQGAAILAHQRF LPQSCAKVP >gi|296918690|gb|GG773010.1| GENE 62 56237 - 58222 2175 661 aa, chain + ## HITS:1 COG:yjcS KEGG:ns NR:ns ## COG: yjcS COG2015 # Protein_GI_number: 16131909 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alkyl sulfatase and related hydrolases # Organism: Escherichia coli K12 # 1 661 5 665 665 1312 97.0 0 MNNSRLFRLSRIVIAFTAASGMMINTAYATDEAKAATQYTQQVNQNYAKSLPFGDRQDFD DAQRGFIAPLLDEGILRDANGKIYYRANDYKFDINAAAPETVNPSLWRQSQINGISGLFK VTDKMYQVRGQDISNITFVEGEKGIIVIDPVVTPPAAKAALDLYFQHRPQKPIVAVIYTH SHADHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGLLLPH NAQGNVGNGLGVTLATGDPSIIAPTKTIVRTGEKMIIDGLEFDFLMTPGSEAPAEMHFYI PALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVW GNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYYGSVS HNTRAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVINLAQEANKQGDYRWSA ELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSHGTTG SPDTIRGMSVEMLFDFMSVRLDSVKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQP QADASFYISREDLHAVLTGQAKMADQVKAKKAKIIGNGAKLEEIIACLDNFDLWVNIVTP N >gi|296918690|gb|GG773010.1| GENE 63 58430 - 58705 195 91 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4582 NR:ns ## KEGG: ECS88_4582 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 91 17 107 107 145 100.0 6e-34 MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPGWFFCAIASLILTLITRRI IQRTNINLAFVGIIYTALFALYAMLFWLAFF >gi|296918690|gb|GG773010.1| GENE 64 58724 - 59755 1153 343 aa, chain + ## HITS:1 COG:yjcR KEGG:ns NR:ns ## COG: yjcR COG1566 # Protein_GI_number: 16131908 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 343 1 343 343 577 98.0 1e-164 MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYASADTIDVVPEVSGRIV ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN ATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQAQSAAS SVSGVDALVAQRAAVEADIALTKLHLEMATVRAPFDGRVISLKTSVGQFASAMRPIFTLI DTRHWYVIANFRETDLKNIRSGTLATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGL PKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGASAVANLEPQ >gi|296918690|gb|GG773010.1| GENE 65 59755 - 61806 1594 683 aa, chain + ## HITS:1 COG:yjcQ KEGG:ns NR:ns ## COG: yjcQ COG1289 # Protein_GI_number: 16131907 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 48 683 1 636 636 1219 98.0 0 MSALNSLPLPVVRLLAFFHEELSERRPGRVPQTMQLWVGCLLVILISMTFEIPFVALSLA VLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEPLIRLIIAGPILMGCMFLM RTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCIVVGLYPTLLMTLIGVLWFPS RAITQMHQALNDRLDDAISHLTDSLAPLPETRIEREALALQKLNVFCLADDANWRTQSAW WQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKLVSEINKLQHTIAEGQCWQSDWRIS ESEAMAARECNLENICQTLLQLGQMDPNTPPTPAAKPPSMVADAFTNPDYMRYAVKTLLA CLICYTFYSGVDWEGIHTCMLTCVIVANPNVGSSYQKMVLRFGGAFCGAILALLFTLLVM PWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATLENVFGPVYDLVEIR DRALGIIIGTVVSAVIYTFVWPESEARTLPQKLAGALGMLSKVMRIPRQQEVTALRTYLQ IRIGLHAAFNACEEMCQRVVLERQLDSEERALLIERSQTVIRQGRDILHAWDATWNSAQA LDNALQPDRAGQFADALEKYAAGLATALSRSPQITLEETPASQAILPTLLKQEQHVCQLF ARLPDWTAPALTPATEQAQGATQ >gi|296918690|gb|GG773010.1| GENE 66 61803 - 63269 1566 488 aa, chain + ## HITS:1 COG:ECs5062 KEGG:ns NR:ns ## COG: ECs5062 COG1538 # Protein_GI_number: 15834316 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 1 488 1 488 488 897 99.0 0 MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQW WKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVS ANGFLSPYAMDAPALGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETA AVELSLTTGVAQLYYSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARA QILAVDKQIAAVKGQITETRESLRALIGAGASDMPEIKPVALPRVQTGIPATLSYELLAR RPDLQAMRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLDTLFKKTSRQFNFIPGLK LPLFDGGRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVE ATRFTQRAAEAAYQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ AAPIVEKK >gi|296918690|gb|GG773010.1| GENE 67 63467 - 63886 382 139 aa, chain + ## HITS:1 COG:ECs5061 KEGG:ns NR:ns ## COG: ECs5061 COG0243 # Protein_GI_number: 15834315 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 139 1 139 715 296 100.0 6e-81 MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTP RLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVM QKFARAVIGTNNVDCCARV >gi|296918690|gb|GG773010.1| GENE 68 63935 - 65614 1786 559 aa, chain + ## HITS:1 COG:fdhF KEGG:ns NR:ns ## COG: fdhF COG0243 # Protein_GI_number: 16131905 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 559 157 715 715 1169 99.0 0 MSNAINEIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHI ALKNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSAS EIRQAARMYAQAESAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRGQN NVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVESLPAHTGYRISELPHRVAHGEVR AAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFMTKTASAADVILPSTSWGEHEGVFT AADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGAT YEKMGELGFIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMV LSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKII TRAQVSDRPNKGAIYMTYQWWIGACNELVTENLSPITKTPEYKYCAVRVEPIADQRAAEQ YVIDEYNKLKTRLREAALA >gi|296918690|gb|GG773010.1| GENE 69 65989 - 67557 1618 522 aa, chain + ## HITS:1 COG:mlr5513 KEGG:ns NR:ns ## COG: mlr5513 COG0747 # Protein_GI_number: 13474595 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Mesorhizobium loti # 15 522 80 600 601 365 40.0 1e-100 MIKKLLPLLVLSTISATTVAATPPNTLVVAQGLDDIVSLDPAEANELSSIQTVPSLYQRV VQPDRNDPTKITPILAESWQADPAAKTLTIKLKSDAKFASGNPVRPEDVIYSYVRAVTLN KSGAFILNVLGWQPENIASQLKKIDDHTVQVQWSADVSPALALNILSTPIASIVDEKLVA PNAKNNDFGNEWLKMHSAGSGAFKMRTYQPHQAIVMEANASSPTGAPKLKNVIIKNVPDP ATRRLLIQQGDADMARDLGADQIDALQGKPGVKVMSIASAEQNYLAFNTGNKDNPLMSNP AFWEAARWLVDYDGITKNLLKGQYFTHQSFLPVGFPGALEETPFTFNPAKAKEILAKAGI KDPHFTLDVENKPPFITIAQSIQASFAQGGVKVDLLPAAGSQVYSRVRAHQHQGAIRMWL PDYFDAHSNASSFAYNDGKSSTVAGLNGWKIPELNKETLAAIAEPDSTKRLDLYKKMQQE LQRSSPYVFIDQGKTQIVMRDNVQGYQQGLNADMVWFDQVTK >gi|296918690|gb|GG773010.1| GENE 70 67657 - 68706 356 349 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 34 346 9 310 320 141 30 2e-32 MSVVFSTRARWRGKRPLLALLQGLFTVALTLLGLLLITFALSALSPVDRVLQIVGDHASQ STYDQVRHQLGLDQPLAVQFWHYLMNLAHGDLGIASSTGQPVLQDLLSVFPATIELATLA LIVGAVVGVIAGVLCARYVGSPLDFTVRTLTLLGNSVPVFWLGLLMLALFYARLQWSAGP GRLDDIYQFTIEPRSGFALIDTWLSGDREAFTNAINHLILPVLLLAYFSLASITRLTRSA CLGEMNKEYILLARAKGASEMTILLRHVLPNIRGTLLTVIALAYTSMLEGAVLTETVFSW PGIGRYLTTALFAGDTTAIMGGTLLIGVCFVLINNLTDLLVRLTDPRLR >gi|296918690|gb|GG773010.1| GENE 71 68706 - 69539 681 277 aa, chain + ## HITS:1 COG:YPO3451 KEGG:ns NR:ns ## COG: YPO3451 COG1173 # Protein_GI_number: 16123597 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Yersinia pestis # 1 277 1 278 278 367 79.0 1e-101 MPMFLFLRRLRHSPAAFCGLIIILLLMLIALFAPWLAPHDPNWQDAAARLQAPSRQHWLG TDSYGRDLLSRLIYGSRPALGLVALVTIITLPVGLLIGILAGYYGGWLERVLMRFTDVVM SMPRLILAFAFVAMLGPGLVNGALALALTTWPAYARQARSEIQRLRHSDYLAAAEMMGIR GRRLLAGHILPLCLPSAIVRLALDLAGIILAAAGLGFLGLGARPPMAEWGAMIADGMQVI FDQWWIAAAPGAIILIASLAFNLLGDGLRDVLEPQHD >gi|296918690|gb|GG773010.1| GENE 72 69532 - 70368 183 278 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 225 1 212 311 75 27 2e-12 MTDSRLSINNLCVDYPESRVVNNVSFTLGNERLALVGESGSGKSMTARALMGLVRKPGVV TADTLNILGRDALTLNARGWQQLRGNDIAMVLQDPRYALNPVKTVKAQLEEALTLHQRLN RREKEEKINTAIQAVGLNTRVLQSYPRELSGGMGQRVMIAIALINDPRVLIADEPTSALD VRLRNQILELLVTQCEQRQMAMLLISHDLPLVAQFCHRVLVMYQGNKVDEMHAAALPTAT HPYTRTLWTCRPNAQTYGQMLPTLDRTAMTPEKYHDDC >gi|296918690|gb|GG773010.1| GENE 73 70355 - 71059 445 234 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 18 224 37 247 329 176 45 8e-43 MTIVEINHLQVTFAEKTAVSAASFSVNAGETFSLIGESSCGKSTILRVIAGLQRDWHGQV SLFGHTIKPGMRFQGDLRRNVQMVFQDPYASLHPNHTLWRTLAEPLKIRGEREIEKRVQT ALEQVGLPFDAARRYPHQLSGGQRQRVVIARALLLRPQLLLLDEPTSALDMSVQAEILNL LNQLKLEHQMTYLLVSHDADVIAHMSDRAALMSEGKIQRFFDRDAMEKGEHRMD >gi|296918690|gb|GG773010.1| GENE 74 71191 - 71859 686 222 aa, chain + ## HITS:1 COG:ECs5060 KEGG:ns NR:ns ## COG: ECs5060 COG0790 # Protein_GI_number: 15834314 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli O157:H7 # 1 222 8 229 229 420 100.0 1e-118 MLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDA DACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAIS LLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGM MFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG >gi|296918690|gb|GG773010.1| GENE 75 72007 - 73320 1619 437 aa, chain - ## HITS:1 COG:ECs5059 KEGG:ns NR:ns ## COG: ECs5059 COG1301 # Protein_GI_number: 15834313 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Escherichia coli O157:H7 # 1 437 1 437 437 749 99.0 0 MKNIKFSLAWQILFAMVLGILLGSYLHHHSDSRDWLVVNLLSPAGDIFIHLIKMIVVPIV ISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITLANVFQPGAGVDMSQLATV DISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEMLPIIFFSVLFGLGLSSLPAT HREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVTVANFGFSSLWPLAKLVLLVHFA ILFFALVVLGIVARLCGLSVWILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPASI TSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIWQEIILVLTLMVTSKGIAGVPGV SFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHKFDRKKA LAYEREVLGKFDKTADQ >gi|296918690|gb|GG773010.1| GENE 76 73663 - 74259 698 198 aa, chain - ## HITS:1 COG:ECs5058 KEGG:ns NR:ns ## COG: ECs5058 COG4235 # Protein_GI_number: 15834312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli O157:H7 # 1 198 1 198 198 321 97.0 5e-88 MKQPQIPVKMLTTLTILMVFLCVGSYLLSPKWQAVRTEYQRQRDPLHQFASQQTPEAQLQ ALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQ ASQHMTVQTRAMIDRALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINR TQLVESINMAKLLQRRSD >gi|296918690|gb|GG773010.1| GENE 77 74256 - 74639 380 127 aa, chain - ## HITS:1 COG:ECs5057 KEGG:ns NR:ns ## COG: ECs5057 COG3088 # Protein_GI_number: 15834311 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in biosynthesis of c-type cytochromes # Organism: Escherichia coli O157:H7 # 1 127 1 127 127 178 96.0 2e-45 MNKGLLTLLLLFTCFARAQVVDTWQFANPQQQQQALNIASQLRCPQCQNQNLLESNAPVA VSMRHQVYTMVEEGKSEVEIIDWMTERYGDFVRYNPPLTGQTLVLWALPVVLLLLMALIL WRVRAKR >gi|296918690|gb|GG773010.1| GENE 78 74632 - 76236 1290 534 aa, chain - ## HITS:1 COG:ECs5056 KEGG:ns NR:ns ## COG: ECs5056 COG1138 # Protein_GI_number: 15834310 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli O157:H7 # 1 533 19 551 552 885 97.0 0 MRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGS LLLWVLLLSAWSVLFAWHYRQQTDPLFPLTLTVLSLILAALLLFVVGWSDPFVRIFPPAI EGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFGGTCARICWRWALPGW SALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFRHWS LLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARD GGPAVRFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATL PFALLMLVVIVLATFVSGKRAQLPALLAHAGVLLFAAGIVVSSVSRQEISLNLQPGQQVT LAGYTFRFERLDLQAKGNYTSEKAIVALFDHQQRIGELTPERRFYEARRQQMMEPSIRWN GIHDWYAVMGEKTGADRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGRKRDE >gi|296918690|gb|GG773010.1| GENE 79 76370 - 77326 1137 318 aa, chain - ## HITS:1 COG:nrfD KEGG:ns NR:ns ## COG: nrfD COG3301 # Protein_GI_number: 16131899 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, membrane component # Organism: Escherichia coli K12 # 1 318 1 318 318 521 99.0 1e-148 MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRVYPQAGGADSTLLRTTLIVG PGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQLYMVVLVLWLAKIFEHDL LALQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLGAYTGFLLSALKSYPFLNNPI LPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAHFVHRMEIPVVWGEIFLLVAFFVGLA LGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPMLLKPWVNRSSGIPAVLAACGASLV GVLMLRFFILYAGQLTVA >gi|296918690|gb|GG773010.1| GENE 80 77323 - 77994 447 223 aa, chain - ## HITS:1 COG:ECs5054 KEGG:ns NR:ns ## COG: ECs5054 COG0437 # Protein_GI_number: 15834308 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 223 1 223 223 442 99.0 1e-124 MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVN KVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDV NPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTHLQAGKLPACVEACPTKALTFG NLDDPSSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ >gi|296918690|gb|GG773010.1| GENE 81 77991 - 78557 333 188 aa, chain - ## HITS:1 COG:no KEGG:APECO1_2384 NR:ns ## KEGG: APECO1_2384 # Name: nrfB # Def: cytochrome c nitrite reductase pentaheme subunit # Organism: E.coli_APEC # Pathway: not_defined # 1 188 3 190 190 363 100.0 2e-99 MSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRNPDAACLDCHKPDTEGM HGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPE QLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPAS VPLLKEQP >gi|296918690|gb|GG773010.1| GENE 82 78602 - 80038 1402 478 aa, chain - ## HITS:1 COG:ECs5052 KEGG:ns NR:ns ## COG: ECs5052 COG3303 # Protein_GI_number: 15834306 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit # Organism: Escherichia coli O157:H7 # 1 478 1 478 478 970 99.0 0 MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPATPVTVEAKNETFAPQHPDQYLSWKATS EQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVRETLRTGAPKNAEDGPLPM ACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGCADCHNTASPEFAKGKPELTL SRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYFDGKNKAVKFPWDDGMKVENMEQ YYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHGKNNVTCIDCHMPKVQNAEGKLYTD HKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQSINDLKIKVEDQLVHAHFEAKAALDA GATEAEMKPIQDDIRHAQWRWDLAIASHGIHMHAPEEGLRMLGTAMDKAADARTKLARLL ATKGITHEIQIPDISTKEKAQQAIGLNMEQIKAEKQDFIKTVIPQWEEQARKNGLLSQ >gi|296918690|gb|GG773010.1| GENE 83 80430 - 82388 2158 652 aa, chain + ## HITS:1 COG:acs KEGG:ns NR:ns ## COG: acs COG0365 # Protein_GI_number: 16131895 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Escherichia coli K12 # 1 652 1 652 652 1348 99.0 0 MSQIHKHTIPANIADRCLINPQQYEAMYQQSINAPDTFWGEQGKILDWITPYQKVKNTSF APGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDASQSKHISYKELHRDVCRF ANTLLELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSS RLVITSDEGVRAGRSIPLKKNVDDALKNPNVTSVEHVVVLKRTGGKIDWQEGRDLWWHDL VEQASDQHQAEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAALTFKYVFDYHPGDI YWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTA IRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGG FMITPLPGATELKAGSATRPFFGVQPALVDNEGNPLEGATEGSLVITDSWPGQARTLFGD HERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHP KIAEAAVVGIPHNIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTD SLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQAIAMPS >gi|296918690|gb|GG773010.1| GENE 84 82680 - 82994 307 104 aa, chain + ## HITS:1 COG:ECs5050 KEGG:ns NR:ns ## COG: ECs5050 COG3162 # Protein_GI_number: 15834304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 104 1 104 104 200 100.0 7e-52 MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTS VTRGIPVGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS >gi|296918690|gb|GG773010.1| GENE 85 82991 - 84640 2127 549 aa, chain + ## HITS:1 COG:ECs5049 KEGG:ns NR:ns ## COG: ECs5049 COG4147 # Protein_GI_number: 15834303 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 959 99.0 0 MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVVFTLGITYWASKRVRSR NDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFL IAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVALYLIAQMVGAGKLIELLFGLN YHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSE AMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFY ATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAGHLIGGNNMAAVHLANAVGGNLFLGFI SAVAFATILAVVAGLTLAGASAVSHDLYANVFKKGATEREELRVSKITVLILGVIAIILG VLFENQNIAFMVGLAFAIAASCNFPIILLSMYWSKLTTRGAMLGGWLGLITAVVLMILGP TIWVQILGHEKAIFPYEYPALFSISVAFLGIWLFSATDNSAEGARERELFRAQFIRSQTG FGVEQGRAH >gi|296918690|gb|GG773010.1| GENE 86 84679 - 85347 451 222 aa, chain - ## HITS:1 COG:STM4272 KEGG:ns NR:ns ## COG: STM4272 COG1346 # Protein_GI_number: 16767522 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Salmonella typhimurium LT2 # 1 222 8 229 229 330 90.0 2e-90 MLCLAITLVIYFLNKRLYRRFRKLPLMPLVLTPTLLVMLLVFGNISWQNYIGEAHGLLWL LGPATIAFAVPVYDNRAIIKRHWMSLTAGVLTATVVAVTSSVWLARLFTLPDEIQRSLAV RSVTTPFALAASQSLGGQPDLVALFVVVTGVFGMAIGDVLFLRLSIREGMAKGAGFGAAS HGAGTARSYELGQQEGVVASLVMMLSGVLMVLVSPLVARMMF >gi|296918690|gb|GG773010.1| GENE 87 85361 - 85771 475 136 aa, chain - ## HITS:1 COG:STM4271 KEGG:ns NR:ns ## COG: STM4271 COG1380 # Protein_GI_number: 16767521 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Salmonella typhimurium LT2 # 1 135 1 135 136 164 85.0 5e-41 MPVALRRITPAVVQSIQVFFQVVLYAGLFIFAQYLVSWLHLPLPANLVGMILMLALIVCR ILPLQWVRAGARWLLAEMLLFFVPAVVAVVNYAQLLLVDGWRIFAVIALSTVMVLGTTAW VVEKVYRYEMRRLNRG >gi|296918690|gb|GG773010.1| GENE 88 85875 - 86759 599 294 aa, chain + ## HITS:1 COG:STM4270 KEGG:ns NR:ns ## COG: STM4270 COG0583 # Protein_GI_number: 16767520 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 291 1 292 295 525 88.0 1e-149 MDIRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELNCILLIRDGRRLLLTDT GRVVFERGLALLAEFRQLEAELSDINQLKTGVLRLGIPPMVGMLMAGPIGLFRQRYPGVE LKISEFGGLTVQQAVMNGELDMALTALPVEESGLTTLSLFSHPLCVLTPHSGKWLECDAV SPETLAEHPLLIYNEDFALSKQLMKLFDEHGVKPRIAVRSGQWDFLAAMVQAGVGIAILP EPICQRLDKNTLKWLPLESELSWKLGMIWREGVYLSHSAHAWLSCCEGYWLTPE >gi|296918690|gb|GG773010.1| GENE 89 86795 - 88417 1635 540 aa, chain - ## HITS:1 COG:ECs5047 KEGG:ns NR:ns ## COG: ECs5047 COG0025 # Protein_GI_number: 15834301 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Escherichia coli O157:H7 # 1 540 10 549 549 960 99.0 0 MTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWPTFGLHVEFDPELFLVLFIPPLLFAD GWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWVVPGIPLIPAFALAAVLSPTDAV ALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMIFTVGGATVEFMKVA IGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIGVSGILAAVA AGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILETSLMAAEIDP NVEIWMLFTDIILIYAALMLVRFGWLWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGV RGAITLAGVLSIPLLLPDGNVFPARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHS QQLKEERIARAATAEVAIVAIQKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRN DVESSILEENLERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ >gi|296918690|gb|GG773010.1| GENE 90 88595 - 89944 1587 449 aa, chain - ## HITS:1 COG:ECs5046 KEGG:ns NR:ns ## COG: ECs5046 COG2252 # Protein_GI_number: 15834300 # Func_class: R General function prediction only # Function: Permeases # Organism: Escherichia coli O157:H7 # 1 449 1 449 449 687 99.0 0 MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAV FVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLGQHISVPVALGAVFLMGVL FTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANGVGLVIKNPLDGLPVALGDFT TFPVMMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGLIFDPNVHFSGVFAMPSLSDENG NSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIIDGGKALT TDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTGLTAITVGVLFLLILFLSPLSYLVPGY ATAPALMYVGLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIGFATLVIGRL VSGEWRKLNIGTVVIAVALVTFYAGGWAI >gi|296918690|gb|GG773010.1| GENE 91 90491 - 90955 507 154 aa, chain - ## HITS:1 COG:ECs5045 KEGG:ns NR:ns ## COG: ECs5045 COG0789 # Protein_GI_number: 15834299 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 298 99.0 3e-81 MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAII KIAQRIGIPLATIREAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCI GCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN >gi|296918690|gb|GG773010.1| GENE 92 91041 - 91364 389 107 aa, chain + ## HITS:1 COG:ECs5044 KEGG:ns NR:ns ## COG: ECs5044 COG2207 # Protein_GI_number: 15834298 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 194 100.0 3e-50 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL >gi|296918690|gb|GG773010.1| GENE 93 91367 - 92953 1028 528 aa, chain - ## HITS:1 COG:yjcC KEGG:ns NR:ns ## COG: yjcC COG4943 # Protein_GI_number: 16131887 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Escherichia coli K12 # 1 528 1 528 528 1035 97.0 0 MSHRARHQLLAFPGIIFLVLFPIILSLWIAFFWAKSEVNNQLRTFAQLALDKSELVIRQA DLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDNHFLCSSLIASVNGYTIAP ADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPLFWSEVMSDDPTLQWGVYDTV TKTFFSLSNEASAATFSPLIHLNDLTVQRNGYLYATVYSTKRPIAAIVATSYQRLITHFY NHLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCI GAEALLRWPGEQGQVMNPAEFIPLAEKEGMIEQVTDYVIDNVFRDLGAYLATHTDRYVSI NLSASDFHTSRLIARTNQKTEQHAVRPQQIKFEVTEHAFLDVDKMTPIILAFRKAGYEVA IDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEG VETEAQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPARELTRGQ >gi|296918690|gb|GG773010.1| GENE 94 93382 - 93663 300 93 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C4646 NR:ns ## KEGG: UTI89_C4646 # Name: yjcB # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 93 34 126 126 166 100.0 4e-40 MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRADYVGLAVISSGLGVVSACWFAMGLLG ITMADITAIWHNIESVMIEEMNQTPPQWPMILT >gi|296918690|gb|GG773010.1| GENE 95 93762 - 94298 682 178 aa, chain - ## HITS:1 COG:ECs5041 KEGG:ns NR:ns ## COG: ECs5041 COG0629 # Protein_GI_number: 15834295 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Escherichia coli O157:H7 # 1 178 1 178 178 270 100.0 1e-72 MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVL FGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQGGG APAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAPSNEPPMDFDDDIPF >gi|296918690|gb|GG773010.1| GENE 96 94552 - 97374 3279 940 aa, chain + ## HITS:1 COG:ECs5040 KEGG:ns NR:ns ## COG: ECs5040 COG0178 # Protein_GI_number: 15834294 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Escherichia coli O157:H7 # 1 940 1 940 940 1900 100.0 0 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML >gi|296918690|gb|GG773010.1| GENE 97 97464 - 97820 458 118 aa, chain - ## HITS:1 COG:ECs5039 KEGG:ns NR:ns ## COG: ECs5039 COG2315 # Protein_GI_number: 15834293 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 118 1 118 118 216 100.0 5e-57 MTISELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVENRPAVSLKTSPELAELL RQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL >gi|296918690|gb|GG773010.1| GENE 98 97824 - 98240 363 138 aa, chain - ## HITS:1 COG:ECs5038 KEGG:ns NR:ns ## COG: ECs5038 COG0432 # Protein_GI_number: 15834292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 276 99.0 8e-75 MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVR HDMERFFLRAVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLG EHRIHGGSRRIIATLQGE >gi|296918690|gb|GG773010.1| GENE 99 98351 - 99064 541 237 aa, chain - ## HITS:1 COG:aphA KEGG:ns NR:ns ## COG: aphA COG3700 # Protein_GI_number: 16131881 # Func_class: R General function prediction only # Function: Acid phosphatase (class B) # Organism: Escherichia coli K12 # 1 237 1 237 237 470 99.0 1e-133 MRKITQALSAVCLLFALNSSAVALASSPSPLNPGTNVAKLAEQAPIHWVSVAQIENSLAG RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVAR QLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQW LQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTYKPLPQAGAFGEEVIVNSEY >gi|296918690|gb|GG773010.1| GENE 100 99479 - 101161 923 560 aa, chain + ## HITS:1 COG:RSc0331 KEGG:ns NR:ns ## COG: RSc0331 COG4191 # Protein_GI_number: 17545050 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating C4-dicarboxylate transport system # Organism: Ralstonia solanacearum # 2 551 82 653 665 319 33.0 8e-87 MRLEMYKSTLYSTIEQFYVLPYMLSTDHIIRQAVITPDDMTSSELNQRIAHFNTQLKTAA IFILDTQGKAIASSNWQDPGSYVGQNYSYRPYYKHAMSGLNGRFYGIGSTTNTPGFFLST SIKDKGKIVGVVVVKISLNEIEKAWAEGPENIIVNDEHGIIFLSSKSPWRMRTLQPLPVQ AKQKLQSTRQYSLDNLLPADYYPCYTVSNFTFLKDKKEQLCLFPQYYTQQIAIPEFNWKM TIMVPLDNLYWSWAISLVITLIIYLLFLLFIKYWRMRSHAQQLLTLANETLEKQVKERTS ALELINQKLIQEIKERSQAEQVLQITRSELAESSKLAALGQMATEIAHEQNQPLAAIHAL TDNARTMLKKEMYPQVEQNLKHIISVIERMTQLISELKAFASRHRVPKGSADVIKVMYSA VALLNHSMEKNNIERRIKAPSMPLFVNCDELGLEQIFSNLISNALDSMEGSSYKRLDIAI RQANNKVIITIKDSGGGFAPEVVDRIFEPFFTTKRRGMGLGLAIVSEIVRNSNGALHASN HPEGGAVMTLTWPEWGEEHE >gi|296918690|gb|GG773010.1| GENE 101 101154 - 102512 806 452 aa, chain + ## HITS:1 COG:RSp0009 KEGG:ns NR:ns ## COG: RSp0009 COG2204 # Protein_GI_number: 17548230 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Ralstonia solanacearum # 10 447 19 452 454 447 54.0 1e-125 MNNKSSEITIVYIEDSDDVRFACEQTLTLAGYRVISCCDAEHSIPLIQSQANIIILTDVR LPGISGLELLSYINEMDSKIPVILITGHGDVEMAVDAMRNGAFDFIEKPSSSDKLLSIIA RAVEKRRLVLENQQLLANLQQENGPVLIGRSPQMQQLRKMILNVADTGADVLIYGETGCG KEVVARMLHHWSTRRQGQFVALNCAGLPETLFESEIFGHEAGAFTGAVKKRIGKIEHANG GTLFLDEIEGMPSGMQVKLLRVLQERTIERLGANQLIPVNCRVIAATKEDLLRRSEEHLF RLDLYYRLNVVSLNIPPLRQRREDIPELFYWFASQAAQKYNRPLPDISPMLLAWLQSQSW PGNVRELKHNAERFVLGLLTHHQPVPMTQQEESGLTACIDAFEKKLIEDMLRQTEGQVSL TARLLQLPRKTLYDKLNKHQIQPQVYRPESSS >gi|296918690|gb|GG773010.1| GENE 102 102501 - 103574 842 357 aa, chain - ## HITS:1 COG:ybiC KEGG:ns NR:ns ## COG: ybiC COG2055 # Protein_GI_number: 16128769 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 22 334 24 335 361 172 34.0 1e-42 MSLQIAVEKVRWLAAGLLELNGCDADIAQDVAEHMIEAERYGFASHGVTLLPKYLENIAR GDVTANARPECLTSEGNLQRFHAHNGFGQHAGKVAVNAAIEQAKHRGFCLLTLCHAHHLG RMGHYGQMVADQGLAMLAMSNVTGRPALVAPWGGAEPRMTTNPFCFAWPFSDGRPPILVD FATSSMALNKARVMSSTGKQAAPGQLIDAQGNPSNDPGVLFSNPPGALLPFGEHKGFGLA LMIEMMAGILSGGDTIAEDHQTDGSAHNHLFALIIDPDQFTDLAGEKGQFFADYLLATQP QPGGNPVIYPGMPEAANRERNAKMITIPVSFWSWIVEHYARKGIDLGLHPQESALAG >gi|296918690|gb|GG773010.1| GENE 103 103586 - 105085 1507 499 aa, chain - ## HITS:1 COG:SA0645 KEGG:ns NR:ns ## COG: SA0645 COG0471 # Protein_GI_number: 15926367 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Staphylococcus aureus N315 # 22 499 29 517 517 385 49.0 1e-106 MSSISHGAPQKRRIIPNPGLWLAIIAGIIITLLPLGDTLPVAGQNMIAILVFAIIVWISE AMDYTASAIVISALIIFMVGFAPDMNHPDTILGTAKALKMTLSGFSNSALALVAAAMFIA AAMTITGLDKRIALFTMSKIGASSRSIIIGAIVVTIVLSLVVPSATARTACVVPIMMGVI AAFKVDKHSRLAASMMIVIAQATSIWNVGIQTSAAQNLLSIGFINKTFGAGHSVSWLDWL LAGAPWSLTMSVILYFLARKLLPPETEAVEGGSEAIKKALAELGPTTGKEKRLIGISLLL LLFWSTGGKLHSIDTTSVTLAGLAIMLLPGIGVMSWKEVEKRVQWGTLLMFGIGISLGST LLDTQAASWMANYVVKGFGLDGLPSLAIFAILAAFLIIIHLGFASATALTAALLPILISL LSSLPPELGVNPVGMTILLAFSVSFGFILPINAPQNMVCMGTDTFTPRQFTRVGLYLTVI GYLLLLLFAATWWKILGLM >gi|296918690|gb|GG773010.1| GENE 104 105297 - 106169 888 290 aa, chain - ## HITS:1 COG:NMA1154 KEGG:ns NR:ns ## COG: NMA1154 COG0074 # Protein_GI_number: 15794100 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 290 1 291 296 430 77.0 1e-120 MSVLINKHTRVLVQGITGKNGTFHTEQAIAYGTQIVGGVTPGKGGQRHLDRPVFDSMKEA MPQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCHPDVRL IGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQSTCIGIG GDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEMNKPVVGYIAGVTA PKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVIK >gi|296918690|gb|GG773010.1| GENE 105 106182 - 107351 1309 389 aa, chain - ## HITS:1 COG:NMA1153 KEGG:ns NR:ns ## COG: NMA1153 COG0045 # Protein_GI_number: 15794099 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Neisseria meningitidis Z2491 # 1 389 1 387 388 445 58.0 1e-125 MNLHEYQAKSLLAGMGMPCPKEIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKAG GVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSILLCENIYPVRQELYFGMVVDRE SQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVLQLEHGLFATF SRLVNQAWKAFNELDFALLEINPLVLRETGEFMCADAKVSLDDNALYRHPELQVLRDETQ EDPRESQAAKLDLNYVSLDGNIGCMVNGAGLAMATMDIIKLYGEQPANFLDVGGGATQER VSEAFRLIVSDSKVKAILVNIFGGIVRCDMIARAIIHALNEARITLPVVVRLSGNNAAEG QRLLAESGLTVEAVNSLDDAAKRIIALLN >gi|296918690|gb|GG773010.1| GENE 106 107373 - 108791 678 472 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 5 471 4 457 458 265 30 8e-70 MSTIFDVAVMGGGPGGYVAALRAAQNGLSVVCIDDGVNAQGEPSPGGTCLNVGCIPSKSL LQSSELYAQVQHEASIHGVNVEGVSFNAAAMIQRKDAIVSRLTMGISLLFKKNKVKHLCG LATLERAQDEIWQLRVNDQHIHARNVVIATGSQPRQLPGVTIDNQQILDNRGALALSEVP PRLGVIGAGVIGLELGSVWNRVGSDVTLLEMAPTFLPALEARLSNEVRKAMIASGMKMQL AVEIEAIEQRDDGVHVRWRQGEKREESRFDKLILAIGRVPRLSGVDLVQLGLEADNRGGI AVDNLCRTGKAGLWAIGDVVRGPMLAHKAMAEGVVVADQIAGLAVEPINFALIPSVIYTQ PEVAWVGENEASLKAAGRVFNKGNSLFAGNGRALALGQEGGRCTLYSDKHTDRVLGGAIV GPQASELINEIALAMTFSASGEDIACAIHAHPTLSEVIHEAAMALNNKALHG >gi|296918690|gb|GG773010.1| GENE 107 108803 - 109957 1012 384 aa, chain - ## HITS:1 COG:RSc1270 KEGG:ns NR:ns ## COG: RSc1270 COG0508 # Protein_GI_number: 17545989 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Ralstonia solanacearum # 1 384 3 418 418 405 54.0 1e-113 MIEITVPVLPESVTEGTLTTWCKQEGEHVKRDDVIAELETDKVILEIPAPHDGVLSNIIV SEGSTVTSAQLLAHLKPQAVIEETVTPVTETLAMPSARLEAQRSGVELADVAGSGRNGRI LKEDVQRVTPAPVIQPERVAEIAPAKPLTPGARQERREPMSRLRQRIAERLLASQQNNAI LTTFNEVNMQSVMDLRTRWKDRFAEKHGVKLGFMSFFVKAVTRALERFPVVNASVDGNEI IWRDYCDIGIAVSSNRGLVVPVLRNAQSLSLVEIERQIAEYATQARNGKLPLEALQGGTF SITNGGTFGSMMSTPIINPPQSAILGMHAITPRPVAENGQVVIRPMMYLALSYDHRIIDG QEAVQTLVAIRELLESPEQLLLDL >gi|296918690|gb|GG773010.1| GENE 108 109990 - 112734 1833 914 aa, chain - ## HITS:1 COG:NMA1149 KEGG:ns NR:ns ## COG: NMA1149 COG0567 # Protein_GI_number: 15794095 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Neisseria meningitidis Z2491 # 9 910 9 941 942 968 52.0 0 MENMTSPGTLLSGDNATWLEEYYQTWLRTPEQLPEDWRRFFLSPELTVQSVSGDNNVSGA TLKKQAAVIQLINAWRTQGHLRAKLDPLGLNPPADVPSLQPGFWGLSEEDLLQEFSVTFG AHTTQMPLKQLLNLLEQAWAGSQAYELAHLENREEINWLLSRIESSNAPQADAQTCIARF EKLMAAETLERYLHTRYVGQKRFSLEGGESAIPALDTLTKRLRAQGVEEMVIGMAHRGRL NVLVNLLNKDPAQLFAEFEGKQTIGSGSGDVKYHMGYSSNLETPAGSLHVALAYNPSHLE IVNPVVLGQVRARQERRGEDGQAKVVGVLIHGDSALGGLGVNQTTFNLSQTQGYGTGGTL HLVINNQIGFTTSRLQDMRSSRYCTDIAKMVAAPIIHVNGDDVDAVCQVMELACEWRDTF RRDIIIDICCFRKHGHNESDEPRLTQPQMYQAVDAHPGTLARYGESLARRGLLTQAQQDE MTARYRDWLDSCQKREPQPLKPAIHSFSANWYGLTNPHWSAPVSTALPRQKLAAYGEIIS TLPPDVVAHPTIKRQLALRQDMAAGTQPIDWGMAEMLAYASLVDAGVGVRLSGEDSGRGT FSHRHAVVHHQTEARRYLPLQHIRAGQASFDVYDSVLNEEALLAFEYGYSTSAPQQLVIW EAQFGDFANGAQVAIDQFISSGETKWDRYSGLTILLPHGYDGQGPEHSSARPERWLQLCA ENNMQVVMPSESAQMFHLLRGQALRPMRKPLVIMMSKRLLRFKGAMSELSEFTDGAYKPV VTDPQLHQSQKVKRVILCSGQVYYDVLEARKQRECEDEVAIVRLEQLYPFPVAELNDVLA SWPNCCEWIWLQEEPENQGAWRQIRHELAALKINTPYWQYAGRPAVAAPATGYGRVHKQQ IDEFLAAAFADIQP >gi|296918690|gb|GG773010.1| GENE 109 112916 - 114109 1239 397 aa, chain - ## HITS:1 COG:tyrB KEGG:ns NR:ns ## COG: tyrB COG1448 # Protein_GI_number: 16131880 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 397 1 397 397 790 97.0 0 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLKAVADAEARLNAQP HGASLYLPMEGLNSYRHAIAPLLFGADHPVLQQQRVATIQTLGGSGALKVGADFLKRYFP ESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHP CCHNPTGADLTNDQWDSVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPAL VSNSFSKIFSLYGERVGGLSVLCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN DEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLRTAQVD RLREEFGVYLIASGRMCVAGLNAQNVHRVAKAFAAVM >gi|296918690|gb|GG773010.1| GENE 110 114191 - 115189 586 332 aa, chain - ## HITS:1 COG:Rv0212c_2 KEGG:ns NR:ns ## COG: Rv0212c_2 COG3172 # Protein_GI_number: 15607353 # Func_class: H Coenzyme transport and metabolism # Function: Predicted ATPase/kinase involved in NAD metabolism # Organism: Mycobacterium tuberculosis H37Rv # 167 323 6 164 179 82 34.0 1e-15 MKPFATGLVVGKFAPLHCGHEKLINTALAQCEELFIISYSVPEMPDCEPEKRLTWLQVRF PQATILVLTPELVARYNLPAIPHNDADIHRHYVATLCLQILRCRPHAVFTAEDYGDGFAN VLARRFAQPVEHVRMARPVGDEAPSGTLIRSDVHRYRYMLANDVYYSFVRRICLLGGEST GKSTLSKALADGLDTVYVAEFGRDYWEEKNGILTADDLLHIACEQVRREQQAEANHYLIC DTSPLTTLFYALDQYGHAPQELHQLAEREYSLVVLCGAEFPFVQDGTRQGEVFRARQQVW YEQELSRRNIPYLSVSGSLQERLGQILHRLPD >gi|296918690|gb|GG773010.1| GENE 111 115186 - 115743 196 185 aa, chain - ## HITS:1 COG:PA1958 KEGG:ns NR:ns ## COG: PA1958 COG3201 # Protein_GI_number: 15597154 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Pseudomonas aeruginosa # 1 181 1 182 191 100 36.0 2e-21 MSYSEIAACLAYAVSVWLAARNNVHTWWIGIIGSILYGWVFWSVQLYADVTLQLFFIATS ITGWIHWLKGQGGDILPVRRTQASHFFLLLLCAVVVAGGYGFLLHTFTNAWAPWLDSLIL TFSVLAQFMLMGRRIENWFVWLAVNTLAVPLYMTRGLNLTAGLYFLFWINAWHGLYQWRK ELQTS >gi|296918690|gb|GG773010.1| GENE 112 115766 - 116845 971 359 aa, chain - ## HITS:1 COG:alr KEGG:ns NR:ns ## COG: alr COG0787 # Protein_GI_number: 16131879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli K12 # 1 359 1 359 359 724 99.0 0 MQAATVVINHRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARL EEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVW MKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNT FCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGR VAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD >gi|296918690|gb|GG773010.1| GENE 113 116898 - 118313 1528 471 aa, chain - ## HITS:1 COG:dnaB KEGG:ns NR:ns ## COG: dnaB COG0305 # Protein_GI_number: 16131878 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Escherichia coli K12 # 1 471 1 471 471 884 99.0 0 MAGNRPFNKQQTDNRERDPQVAGLKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVADDF YTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANIS AYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDLAESRVFKIAESRANKDEGPK NIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTF AMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISGT MGILLEKRNIYIDDSSGLTPTEVRSRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLE IAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYR DEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE >gi|296918690|gb|GG773010.1| GENE 114 118386 - 119420 649 344 aa, chain - ## HITS:1 COG:SMc04401 KEGG:ns NR:ns ## COG: SMc04401 COG1609 # Protein_GI_number: 15967059 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 7 340 2 335 347 239 38.0 8e-63 MAKSDTGRKRVTLTDVARAAGVSKSTVSLVLNDSSLIKKETQQKVQQAIEQLGYVYNRFA ANLRSQKSLTIGVVIDDLINPFFAEFTMGLEMTLAEHGFITVMSNTSQRSDRQKQVLDTL LEHHVAGIVLCPVNSTSEADLQRYANSSTPLLITMRPLDWQQLPVDYVGVDSHAGVREAT EYLIQQGHRDIVFIGGLTHHMRYQGYLEAMNHHGLQPWSTDAFSLRAEPTQANGYQLMQQ LLDMPSPPTAVICYNDLMAFGAESALGERGLFAGEDISLIGNDGVAACAYSNPPLTTIAV EPLALGKQAAQQILRRIAQPDAPLSHYIYRPTLQIRASTGKRGR >gi|296918690|gb|GG773010.1| GENE 115 119676 - 121247 1315 523 aa, chain + ## HITS:1 COG:mlr3047 KEGG:ns NR:ns ## COG: mlr3047 COG4670 # Protein_GI_number: 13472677 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Mesorhizobium loti # 5 517 3 514 533 704 68.0 0 MCSVRTITAPEAADLIVDGAVVTVSSSSGMGCPDAVLAAIGERFQRAGHPQNITSIHPIA AGDMYGVKGIDHLAQPGLLAKVIAGSYPSGPSSMAPPLIWQMINDNAIPAWNLPSGILFD MHREAAAHRPGVLTQTGMDTYVDPLLQGGAMNEKAAQQSLVERVRFANDDWLFFPSIVPQ VAIIRATTADERGNLTYEHEGAYLGPLEQATAVRNNGGIIIAQVKRQVAAGSLKPKEVRI PGVLVDYIVIAPEQTQTTQTQYEPAISGEISRPLSAFRYMEHGPARVIAQRVAQELQSGD AVNIGFGISANVPRILLEQGRHGDVTWLLEQGAIGGVPLLEFQFGCASNAEAFLPSPQQF TYFQGGGFDLTLMSFLQIGADGSVNVSHLPARPHVTAGCGGFIDITSHAKRIIFSGFFNA GAQLQLEEGQLRIIKEGKAKKLVQDVAHVTFSGKRAIRLGQQVQYITERCVLELTPDGLL VTEIAPGIDPERDILAQSNAPLRLADDLKLMNPHYFQQGRHHE >gi|296918690|gb|GG773010.1| GENE 116 121240 - 122019 709 259 aa, chain + ## HITS:1 COG:SMc04398 KEGG:ns NR:ns ## COG: SMc04398 COG1024 # Protein_GI_number: 15967056 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Sinorhizobium meliloti # 1 256 1 255 259 181 41.0 2e-45 MNNGTIDLQRNGFIATLVINRPAKLNALTPEMLEQLLAHCHTLETDSEIRVVLLTSASEK AFCVGADIHRWTSLSALDMWRNWIRRGHQAFDALAQLPQPVIALLHGLAYGGGLELAATT DIRICSAEAQMALPETGLATVPGWSGTQRLTALLGRSLVKELVFTGEPLDAQRALSCGLV NRVVAREALHDAGLQLAQRIAQRAPVAVQIAKQVIDAGEGIAVASTLEALAGAFSATTED AHEGSQAFTEKRQPHFSAR >gi|296918690|gb|GG773010.1| GENE 117 122110 - 123510 1020 466 aa, chain + ## HITS:1 COG:Cj0339 KEGG:ns NR:ns ## COG: Cj0339 COG0477 # Protein_GI_number: 15791707 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Campylobacter jejuni # 17 448 23 452 453 343 40.0 4e-94 MQPSQPAEKANVSSADLRRAAWTCSLGSALEYYDFALYSLASAIIFGPLFFPNQEPGMAL IASFGTYFLGFAVRPVGGIIFGSLGDRLGRKFVLLATVLLMGIASTLIGVLPTYETAGIW APIMLIALRLLQGLGAGAEQAGAAVLMTEYAPDGKRGYYAALPFLGIQIGTFMASAVYFI LLHNVTNLAETWWWRLPFLSSVVIIAVAIYIRLHLKESPSFAKLEACQQVTESPLRNLLK TSRRNVFVGIGLRLAENGGSSIYQALAISYIVGVVGLDKSVGTLCLMSAVVVGAIMVPIA GWLTDRFGRVLVYRSLAIFQLLITFPVWWSFSHGNVPVTIVSLSLALGIGAWGMFGAQGA FLPELFGARHRYIGVALAREVSAVIAGGIAPLVGSAIISWVIHTNDPSGIAAWMPIAIYL SLLTVGTIIATFFAPETRDRDLDDLADAETISVSQHNQTTGTSHDA >gi|296918690|gb|GG773010.1| GENE 118 123500 - 125548 923 682 aa, chain + ## HITS:1 COG:TM0427 KEGG:ns NR:ns ## COG: TM0427 COG1053 # Protein_GI_number: 15643193 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Thermotoga maritima # 31 609 6 596 664 334 36.0 4e-91 MTHNVSESIIDSLTDVKMPHYAPLAQVSGSIDLNGTILPEYRCNTLVLGSGAAGWRAAVE LKRQNVDVMVASSKAFWGTSACSGSDKQTLHTANTRANGDHFLTLSNTLAAGGAMDHDTA YVEAVGSVNTCEVLKYLGLDLPEDLFGATLRYQTDHDEFGRATSCGPRTSRLMVKVLAQE AMRLNIPLCDHTTAIRILTSGEGENRRVEGVIAIDKACRDNPWRMVVIRCQHLVLATGGP GELYRDSVYPVNCFSALGMALEAGITLVNLTESQFGIGTPRNQFPWNLSGTYMQAIPRIY SQDHSGRQYNFLATYYPTTRMLASAIFRKGYQWPFHAERMLEYGSSLLDVAVYEETQKGR DVFLDFLREPEPAADGTLFNLRELDDDVIDYLQQNHALLAQPLARLTQMNPLAIRLYQMH GHDLTASPLKFTLNNQHLNGGIEVDIWARTSLTGCYAAGENAGTHGVTRPGGAALNAGQV FARRCALHIAHQKSQDRPLERQQILSTINEAQQHLNQGLLRDDVRETIQNTMSHHAAILC HTQGINTAAQTLATLCEDIRREGIQCDENSLAQSFQWRQSAQLALAVLRSLQCYVENGGG SRGARAIYDGEAGIAPQTPGGPLLAWRFRPENQDARQYMICVCREANDYQTWTRPCRERG VLTLTNFERQWQNWIAATPFQY >gi|296918690|gb|GG773010.1| GENE 119 125654 - 126637 763 327 aa, chain + ## HITS:1 COG:ECs5033 KEGG:ns NR:ns ## COG: ECs5033 COG0604 # Protein_GI_number: 15834287 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 627 99.0 1e-179 MAIRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSG LGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNINADKAAILPAAISFEQAAA SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS ALKAGAWQVINYREENLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGN SSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQ KYPLKDARRAHEILESRATQGSSLLIP >gi|296918690|gb|GG773010.1| GENE 120 126802 - 127044 377 80 aa, chain - ## HITS:1 COG:no KEGG:ECP_4266 NR:ns ## KEGG: ECP_4266 # Name: pspG # Def: phage shock protein G (Phageshock_PspG); region: Phageshock_PspG; cl11511 # Organism: E.coli_536 # Pathway: not_defined # 1 80 60 139 139 130 100.0 2e-29 MLELLFVIGFFVMLMVTGVSLLGIIAALIVATAFMFLGGMLALMIKLLPWLLLAVAVVWV IRAIKAPKVPKYQRYDRWRY >gi|296918690|gb|GG773010.1| GENE 121 127178 - 128119 1103 313 aa, chain - ## HITS:1 COG:ECs5031 KEGG:ns NR:ns ## COG: ECs5031 COG0042 # Protein_GI_number: 15834285 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Escherichia coli O157:H7 # 1 313 33 345 345 664 100.0 0 MLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAA LAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTV KTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVY QLKRDFPHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTD ADPVAVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADIN VLEHALKLVADKR >gi|296918690|gb|GG773010.1| GENE 122 128329 - 128844 466 171 aa, chain + ## HITS:1 COG:zur KEGG:ns NR:ns ## COG: zur COG0735 # Protein_GI_number: 16131872 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Escherichia coli K12 # 1 171 21 191 191 320 97.0 1e-87 MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLREAEPQAKP PTVYRALEFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFICDRCGAVKEECAEGVEDI MHTLAAKMGFALRHNVIEAHGLCSACVEVEACRHPEQCHHDHSIQVKKKPR >gi|296918690|gb|GG773010.1| GENE 123 128886 - 129095 351 69 aa, chain - ## HITS:1 COG:STM4240 KEGG:ns NR:ns ## COG: STM4240 COG3237 # Protein_GI_number: 16767490 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 69 2 70 70 88 89.0 3e-18 MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQERYGYQKDQAEKEVDS WEKRHDYRW >gi|296918690|gb|GG773010.1| GENE 124 129211 - 130536 1418 441 aa, chain - ## HITS:1 COG:dinF KEGG:ns NR:ns ## COG: dinF COG0534 # Protein_GI_number: 16131870 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 1 441 19 459 459 672 98.0 0 MAFLTSSDKALWHLALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFM LLLFLRMSTTGLTAQAYGAKNPQALARALVQPLLLALGAGALIALLRTPIIDLALHIVGG SEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLV MGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGISGEMLKTAWRGNFRHLLALNRD IMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTLLTFTAYALDGFAYAVEAHSGQAYG ARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGEHIIALLTSLTQIQQLADRYLIWQVIL PLVGVWCYLLDGMFIGATRAAEMRNSMAVAAAGFALTLLTLPWLGNHGLWLALTVFLALR GLSLAAIWRRHWRNDTWFVAT >gi|296918690|gb|GG773010.1| GENE 125 130609 - 131217 638 202 aa, chain - ## HITS:1 COG:ECs5026 KEGG:ns NR:ns ## COG: ECs5026 COG1974 # Protein_GI_number: 15834280 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 1 202 1 202 202 380 100.0 1e-106 MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS GASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSM KDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVD LRQQSFTIEGLAVGVIRNGDWL >gi|296918690|gb|GG773010.1| GENE 126 131327 - 131695 461 122 aa, chain - ## HITS:1 COG:ECs5025 KEGG:ns NR:ns ## COG: ECs5025 COG0818 # Protein_GI_number: 15834279 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Escherichia coli O157:H7 # 1 122 1 122 122 192 99.0 1e-49 MANNTTGFIRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVVIACWLDVDAITRVLLI SSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAVLIAIIVAVITWCILLWSH FG >gi|296918690|gb|GG773010.1| GENE 127 131806 - 134289 2696 827 aa, chain + ## HITS:1 COG:plsB KEGG:ns NR:ns ## COG: plsB COG2937 # Protein_GI_number: 16131867 # Func_class: I Lipid transport and metabolism # Function: Glycerol-3-phosphate O-acyltransferase # Organism: Escherichia coli K12 # 1 827 1 827 827 1661 100.0 0 MTFCYPCRAFALLTRGFTSFMSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRP IMYVLPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEE SIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKL LASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQ GINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPA GPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTG TLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLR NLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAG AANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHAL QMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLME HVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLA AGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLV LTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLTIESATQGEG >gi|296918690|gb|GG773010.1| GENE 128 134442 - 135314 949 290 aa, chain - ## HITS:1 COG:ECs5023 KEGG:ns NR:ns ## COG: ECs5023 COG0382 # Protein_GI_number: 15834277 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 511 99.0 1e-145 MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVPQLWILAVFVAGVWLMR AAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTIL LSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWLMFLANILWA VAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIFQIGVLALMAIIGELNGLGWGYY WSILVAGALFVYQQKLIANREREACFKAFMNNNYVGLVLFLGLAMSYWHF >gi|296918690|gb|GG773010.1| GENE 129 135327 - 135824 527 165 aa, chain - ## HITS:1 COG:ZubiC KEGG:ns NR:ns ## COG: ZubiC COG3161 # Protein_GI_number: 15804632 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate synthetase (chorismate lyase) # Organism: Escherichia coli O157:H7 EDL933 # 1 165 38 202 202 305 98.0 2e-83 MSHPALTQLRALRYFTEIPALEPQLLDWLLLEDSMTKRFEQQGKTVSVTMIREGFVEQNE IPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSGPELALQKLGKTPLGRYLF TSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLPASPLY >gi|296918690|gb|GG773010.1| GENE 130 136003 - 136923 824 306 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4511 NR:ns ## KEGG: ECS88_4511 # Name: malM # Def: maltose regulon periplasmic protein # Organism: E.coli_S88 # Pathway: not_defined # 1 306 1 306 306 493 99.0 1e-138 MKMNKSLIALCLSAGLLASAPGISLADVNYVPQNTSDAPAIPSAALQQLTWTPVDQSKTQ TTQLSTGDQQLNVPGISGPVAAYSVPANIGELTLTLTSEVNKQTSVFAPNVLILDQNMTP SAFFPSSYFTYQEPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTQLLDPAKA YAKGVGNSIPDIPDPVARHTTDGLLKLKVKTNSSSSVLVGPLFGSSAPAPVTVGNTAAPA VAAPAPAPVKKSEPMLNDTESYFNTAIKNAVAKGDVDKALKLLDEAERLGSTSARSTFIS SVKGKG >gi|296918690|gb|GG773010.1| GENE 131 137246 - 138583 1555 445 aa, chain - ## HITS:1 COG:ECs5019 KEGG:ns NR:ns ## COG: ECs5019 COG4580 # Protein_GI_number: 15834273 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli O157:H7 # 1 445 2 446 446 838 98.0 0 MITLRKLPLAVAVAAGVMSAQAMAVDFHGYARSGIGWTGSGGEQQCFQTTGAQSKYRLGN ECETYAELKLGQEVWKEGDKSFYFDTNVAYSVAQQNDWEATDPAFREANVQGKNLIEWLP GSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGLENIDVGFGKLSLAATRSSEAGGSSSFA SNNIYDYTNETANDVFDVRLAQMEINPGGTLELGVDYGRANLRDNYRLVDGASKDGWLFT AEHTQSVLKGFNKFVVQYATDSMTSQGKGLSQGSGVAFDNEKFAYNINNNGHMLRILDHG AISMGDNWDMMYVGMYQDINWDNDNGTKWWTVGIRPMYKWTPIMSTVMEIGYDNVESQRT GDKNNQYKITLAQQWQAGDSIWSRPAIRVFATYAKWDEKWGYDYTGSSSTNPYYGKAVSA DFNGGSFGRGDSDEWTFGAQMEIWW >gi|296918690|gb|GG773010.1| GENE 132 138658 - 139773 1214 371 aa, chain - ## HITS:1 COG:ECs5018 KEGG:ns NR:ns ## COG: ECs5018 COG3839 # Protein_GI_number: 15834272 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 371 1 371 371 729 100.0 0 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEV LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMN FLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPSDIADVIL EGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGT ACRRLHKEPGV >gi|296918690|gb|GG773010.1| GENE 133 140138 - 141328 1495 396 aa, chain + ## HITS:1 COG:ECs5017 KEGG:ns NR:ns ## COG: ECs5017 COG2182 # Protein_GI_number: 15834271 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 759 98.0 0 MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIK VTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTW DAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEP YFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAE AAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKE LAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYQDELAKDPRIAATMDNAQKGEIMPNIP QMSAFWYAVRTAVINAASGRQTVDAALKDAQTRITK >gi|296918690|gb|GG773010.1| GENE 134 141482 - 143026 1562 514 aa, chain + ## HITS:1 COG:malF KEGG:ns NR:ns ## COG: malF COG1175 # Protein_GI_number: 16131859 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 1 514 1 514 514 974 99.0 0 MDVIKKKHWWQSDALKWSVLGLLGLLVGYLVVLMYAQGEYLFAITTLILSSAGLYIFANR KAYAWRYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTFERAQEVLLDRSWQAGKIY NFGLYPAGDEWQLALSDGETGKNYLSDAFKFGGEQKLQLKETTAQPEGERANLRVITQNR QALSDITAILPDGNKVMMSSLRQFSGTQPLYTLDGDGTLTNNQSGVKYRPNNQIGFYQSI TADGHWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGM VLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPA WFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLP LLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGG GQDFGLAAAIATLIFLLVGTLAIVNLKATRMKFD >gi|296918690|gb|GG773010.1| GENE 135 143041 - 143931 1101 296 aa, chain + ## HITS:1 COG:ECs5015 KEGG:ns NR:ns ## COG: ECs5015 COG3833 # Protein_GI_number: 15834269 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 519 100.0 1e-147 MAMVQPKSQKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNFATGSLIPEQISWDHWK LALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKAT LLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGGIALHVWTIKGY FETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV NSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG >gi|296918690|gb|GG773010.1| GENE 136 144041 - 144451 559 136 aa, chain - ## HITS:1 COG:ECs5013 KEGG:ns NR:ns ## COG: ECs5013 COG3223 # Protein_GI_number: 15834267 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 199 99.0 1e-51 MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLADVLFAPEQASKYELVEG LVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILL LVITLWLCNSKRLKRE >gi|296918690|gb|GG773010.1| GENE 137 144826 - 144987 58 53 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C4598 NR:ns ## KEGG: UTI89_C4598 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 53 1 53 53 93 100.0 3e-18 MGKVPVFALTGTFILNGLSSHQERSSPPVCDLVCKGENILSSCPSISVAGLVA >gi|296918690|gb|GG773010.1| GENE 138 144991 - 147087 2247 698 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4502 NR:ns ## KEGG: ECS88_4502 # Name: yjbH # Def: porin # Organism: E.coli_S88 # Pathway: not_defined # 1 698 1 698 698 1416 100.0 0 MKKRHLLSLLALGISTACYGEIYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDN DQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWL PQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCY RDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQ HSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGI KTIRITENRLNMPQVTTETDVASLKNHLGGEPLGHETTLAQKRVEPVVPKSTEQGWYIDK SRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEV LYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV GQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGP TRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR >gi|296918690|gb|GG773010.1| GENE 139 147087 - 147824 510 245 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4501 NR:ns ## KEGG: ECS88_4501 # Name: yjbG # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 245 1 245 245 431 100.0 1e-119 MIKQTIVALILSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGA VISEELATAAALRQQQALLTRLAELAADSSADDAAAINALRQQIQALKVTGRQKINLDPD IVRVAERGNPPLQGNYTLWVGTPPSTVTLFGLISRPGKQSFTPGRDVASYLSDQSLLSGA DRSYAWVVYPSGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLT QRIPQ >gi|296918690|gb|GG773010.1| GENE 140 147821 - 148459 704 212 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4500 NR:ns ## KEGG: ECS88_4500 # Name: yjbF # Def: lipoprotein # Organism: E.coli_S88 # Pathway: not_defined # 1 212 1 212 212 413 100.0 1e-114 MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGP QLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLATDPLIKPAQIVD GATWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETPVRVLDEEVSTDQARWHNRY WIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ >gi|296918690|gb|GG773010.1| GENE 141 148574 - 148816 203 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAA TGGGDGSNTGTTTTTTTSTQ >gi|296918690|gb|GG773010.1| GENE 142 149314 - 150819 1832 501 aa, chain - ## HITS:1 COG:ECs5008 KEGG:ns NR:ns ## COG: ECs5008 COG0166 # Protein_GI_number: 15834262 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Escherichia coli O157:H7 # 1 501 49 549 549 1036 99.0 0 MLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTP ILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDLGPYMVTEA LRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTNAHSARDWFLK AAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSAIGLSIVLSIGFD NFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEAILPYDQYMHRFAAY FQQGNMESNGKYVDRNGKVVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKMVPCDFIAPAI THNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKDPATLDYVVPFKVFEGNRP TNSILLREITPFSLGALIALYEHKIFTQGVILNIFTFDQWGVELGKQLANRILPELKDDK EISSHDSSTNGLINRYKAWRG >gi|296918690|gb|GG773010.1| GENE 143 151523 - 152872 1309 449 aa, chain + ## HITS:1 COG:ECs5007 KEGG:ns NR:ns ## COG: ECs5007 COG0527 # Protein_GI_number: 15834261 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli O157:H7 # 1 449 1 449 449 784 99.0 0 MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGITNLLVALAEGLEPGER FEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAAALATSPALTDELVSHGEL MSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDVAALAELAALQLLPRLNEGLVI TQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRI DEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPRAGGTLVCNKTENPPLFR ALALRRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTSEVSVALTLDTTGSTS TGDTLLTQSLLMELSALCRVEVEEGLALVALIGNDLSKACGVGKEVFGVLEPFNIRMICY GASSHNLCFLVPGEDAEQVVQKLHFNLFE >gi|296918690|gb|GG773010.1| GENE 144 153125 - 153397 369 90 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4496 NR:ns ## KEGG: ECS88_4496 # Name: yjbD # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 90 1 90 90 116 100.0 3e-25 MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKKEYIDKLMVEREAEAKK ARQLKKKQAYKPDPEASFSWSANTSTRGRR >gi|296918690|gb|GG773010.1| GENE 145 153398 - 154270 942 290 aa, chain - ## HITS:1 COG:ECs5005 KEGG:ns NR:ns ## COG: ECs5005 COG1187 # Protein_GI_number: 15834259 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 514 99.0 1e-146 MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE PRESEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS SEAKPKAKAKPKTVGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR >gi|296918690|gb|GG773010.1| GENE 146 154618 - 155565 972 315 aa, chain + ## HITS:1 COG:ECs5004 KEGG:ns NR:ns ## COG: ECs5004 COG2390 # Protein_GI_number: 15834258 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Escherichia coli O157:H7 # 1 315 1 315 315 625 98.0 1e-179 MENSDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGRDQGIVTIAINYDYN ENLWLEQQVKQKFGLKDVVVVSGNDEDEDIQLAMMGLHGAQLLDRLLEPGDIVGFSWGRA VSALVENLPQAGQSRQLICVPIIGGPSGKLESRYHVNTLTYSAAAKLKGESHLADFPALL DNPLIRNGIMQSQHFKTISAYWDNLDVALVGIGSPAIRDGANWHAFYGGEESDDLNARQV AGDICSRFFDIHGAMVETNMSEKTLSIEMNKLKQARYSIGIAMSEEKYSGIVGALRGKYI NCLVTNSSTAELLLK >gi|296918690|gb|GG773010.1| GENE 147 155635 - 156441 197 268 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 265 1 240 242 80 29 5e-14 MQTWLNLQDKIIIVTGGASGIGLAIVEELLAQGANVQMVDIHGGDGQYESHKGYQFWPTD ISSAKEINHTVAEIIQRFGRIDGLVNNAGVNFPRLLVDEKAPAGQYELNEAAFEKMVNIN QKGVFLMSQAVARQMVKQHDGVIVNVSSESGLEGSEGQSCYAATKAALNSFTRSWSKELG KHGIRVVGIAPGILEKTGLRTPEYEEALAWTRNITVEQLREGYTKNAIPIGRAGRLAEVA DFVCYLLSERASYITGVTTNIAGGKTRG >gi|296918690|gb|GG773010.1| GENE 148 156451 - 156858 322 135 aa, chain + ## HITS:1 COG:ECs5002 KEGG:ns NR:ns ## COG: ECs5002 COG2893 # Protein_GI_number: 15834256 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 135 1 135 135 250 94.0 5e-67 MVNAIFCAHGKLACAMLESVQMVYGDARVEAVEFVPGENAGDIVAKLEKLVSIHNHDEWL IAVDLQCGSPWNAAAMLAMRNPRLRVISGLSLPLALELVDNQDSMNVDELCEHLTQIAKQ TCVVWRQVATAEEDF >gi|296918690|gb|GG773010.1| GENE 149 156858 - 157352 536 164 aa, chain + ## HITS:1 COG:ECs5001 KEGG:ns NR:ns ## COG: ECs5001 COG3444 # Protein_GI_number: 15834255 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 311 99.0 4e-85 MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRRTLLRQAAPPGMKVNVV NIEKAVAVYHNPQYQDETVFYLFTRPQDALAMVRQGVKIGTLNIGGMAWRPGKKQLTKAV SLDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQLIAN >gi|296918690|gb|GG773010.1| GENE 150 157418 - 158215 921 265 aa, chain + ## HITS:1 COG:ECs5000 KEGG:ns NR:ns ## COG: ECs5000 COG3715 # Protein_GI_number: 15834254 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 265 1 265 265 421 96.0 1e-118 MEISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILGDLKTGIMLGGTLELIA LGWMNVGAAQSPDSALASIISAILVIVGQQSIATGIAIALPVAAAGQVLTVFARTITVVF QHAADKAAEEARFRTLDILHVSALGVQALRVAIPALIVSLFVSADMVSNMLSAIPEFVTR GLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGGYLDLSLLAFGGVGVIMALLYIQ LNPQWRKAEPHPQTTTITALDQLDD >gi|296918690|gb|GG773010.1| GENE 151 158226 - 159050 811 274 aa, chain + ## HITS:1 COG:Z5614 KEGG:ns NR:ns ## COG: Z5614 COG3716 # Protein_GI_number: 15804609 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 EDL933 # 1 274 1 274 274 492 97.0 1e-139 MEQRKITRSDLVSMFLRSNLQQASFNFERIHGLGFCYDMIPAIKRLYPLKEDQVAALRRH LVFFNTTPAVCGPVIGVTAAMEEARANGAEIDDGTINGIKVGLMGPLAGVGDPLVWGTLR PITAALGASLALSGNILGPLLFFFIFNAVRLAMKWYGLQLGFRKGVNIVSDMGGNLLQKL TEGASILGLFVMGVLVTKWTSINVPLVVSQTPAADGATVTITVQNILDQLCPGLLALGLT LLMVRLLNKKINPVWLIFALFGLGIIGNALGFLS >gi|296918690|gb|GG773010.1| GENE 152 159102 - 160331 1154 409 aa, chain + ## HITS:1 COG:Z5613 KEGG:ns NR:ns ## COG: Z5613 COG1063 # Protein_GI_number: 15804608 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 EDL933 # 1 409 5 413 413 845 99.0 0 MKTTALRLYGKRDLRLETFDLPEMQEDEILATVVTDSLCLSSWKEANLGENHKKVPDDVA TNPIIIGHEFCGDILAVGKKWQHKFQPGQRYVIQANLQLPDRPDCPGYSFPWVGGEATHV VIPNEVMEQDCLLAYDGETYFEGSLVEPLSCVIGAFNANYHLQEGSYNHTMGIRPQGRTL ILGGTGPMGLLAIDYALHGTVNPSLLVITDTDNDKLSYARKHYPSEPQTLIHYLNAADAA FDTLMALSGGHGFDDIFVFVPNEGLVTLASSLLATDGCLNFFAGPQDKHFSAPINFYDVH YAFTHYVGTSGGNTDDMRAAVKLIEEKKVQAAKVVTHILGLNAAGETTLELPAVGGGKKL VYTGKYLPLTSLTQIQDQALAAILARHQGIWSGEAEQYLLAHAEAISHD >gi|296918690|gb|GG773010.1| GENE 153 160713 - 161402 881 229 aa, chain + ## HITS:1 COG:ECs4939 KEGG:ns NR:ns ## COG: ECs4939 COG3340 # Protein_GI_number: 15834193 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 452 100.0 1e-127 MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQTWDDYTAKTAAVLAPL GVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGLLAPITDVVKRGALYIGWS AGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTNALPEGHKGETREQRIRELLV VAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGEEAVPLEAGHRF >gi|296918690|gb|GG773010.1| GENE 154 161492 - 163048 1527 518 aa, chain - ## HITS:1 COG:yjbB KEGG:ns NR:ns ## COG: yjbB COG1283 # Protein_GI_number: 16131846 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Escherichia coli K12 # 1 518 26 543 543 902 99.0 0 MRVFGARLRTVLSRSVEKKPLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVI VLGADVGTALMARILTFDLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALE LIVQAVTPITQANGVQVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTATLTAAGIIS FPVALCLVIGANLGSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMG KLPLPKAELVIYFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSAL DTPTLALANAARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYL ARMPKEELAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELD ALYEQLLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRRYSHAHVDRLHQQNVQSIET SSLHLGLLGDMQRLNSLFCSVAYSVLEQPDEDEGRDEY >gi|296918690|gb|GG773010.1| GENE 155 163294 - 163743 260 149 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4485 NR:ns ## KEGG: ECS88_4485 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 149 1 149 149 247 100.0 1e-64 MQRQYKKYILLFWGVMDVIAIATYLFYSLGNGRIPFYSDIVHSLSLLKDIGVEGGFYAYA VATVTLQIVLLLSLFFSAQCFLRQKLFSFSFLAIQEFMRFATVSCSISVIPLLLNYFYSQ DLVLNISLFIFSEVTKVTTIIWCKRQGKV >gi|296918690|gb|GG773010.1| GENE 156 163786 - 164106 207 106 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4484 NR:ns ## KEGG: ECS88_4484 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 106 3 108 108 217 100.0 1e-55 MIKIDEIDFFAFEGCSESEVTELLGKKPTGYNDWMINIKTGVEWVFYDGRYWLDFRKSKE GIRCISCSILYHDKSKGRIDVLFSEGIADRGLKNTGGVLIQKRPQL >gi|296918690|gb|GG773010.1| GENE 157 164166 - 167864 4184 1232 aa, chain - ## HITS:1 COG:metH_2 KEGG:ns NR:ns ## COG: metH_2 COG1410 # Protein_GI_number: 16131845 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I, cobalamin-binding domain # Organism: Escherichia coli K12 # 332 1232 1 901 901 1825 99.0 0 MSGASVSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDL LVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACA DEWTARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDQLVAAYRESTKALVEGGA DLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSL RHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAKQI REWAEAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLPEIPVACRLSGLEPLNIGEDSL FVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVENGAQIIDINMDEGMLDAEAAMVR FLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRR YGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPAEDIIFDPNIFAVATGIEEH NNYAQDFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMG IVNAGQLAIYDDLPTELRDAVEDVILNRRDDGTERLLELAEKYRGSKTDDTANTQQAEWR SWEVNKRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFL PQVVKSARVMKQAVAYLEPFIEASKEQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNY EIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGA TTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHG RKKPRTPPVTLEAARDNDFAFDWQAYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWS LAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKMLNPRGVVGLFPANRVGDDIEIYR DETRTHVINVSHHLRQQTEKTGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADA FEAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRP APGYPACPEHTEKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQI QRDQVEDYARRKGMSVTEVERWLAPNLGYDAE >gi|296918690|gb|GG773010.1| GENE 158 168049 - 168873 767 274 aa, chain + ## HITS:1 COG:ECs4936 KEGG:ns NR:ns ## COG: ECs4936 COG1414 # Protein_GI_number: 15834190 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 274 14 287 287 523 98.0 1e-148 MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSVALTELAQQAGLPNSTT HRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHPILRNLMEESGETV NMAVLDQSNHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVTKLLHR KGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISI SGPISRITDDRVTEFGAMVIKAAKEVTLSYGGIR >gi|296918690|gb|GG773010.1| GENE 159 168890 - 170614 1278 574 aa, chain - ## HITS:1 COG:aceK KEGG:ns NR:ns ## COG: aceK COG4579 # Protein_GI_number: 16131842 # Func_class: T Signal transduction mechanisms # Function: Isocitrate dehydrogenase kinase/phosphatase # Organism: Escherichia coli K12 # 1 573 1 573 578 1174 99.0 0 MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKNRIHLYDHHVGL VVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESFFNSVYCRLFDHRSLTPER LFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDLPLRLRWQNKSRDIHYIVRHL TETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSGTLPFLLPIHQTDDGELFIDTCL TTTAEASIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYRE YLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDRFAPQKEMSAAHVRACYQLV KEHDRVGRMADTQEFENFVLEKRHISPALMELLLQEAAEKITDLGEQIVIRHLYIERRMV PLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC YMTEVNFRDIPLPRYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLF RADYWRALQNRIREGHVEDVYAYRRRQRFSVRFV >gi|296918690|gb|GG773010.1| GENE 160 170663 - 171967 1461 434 aa, chain - ## HITS:1 COG:aceA KEGG:ns NR:ns ## COG: aceA COG2224 # Protein_GI_number: 16131841 # Func_class: C Energy production and conversion # Function: Isocitrate lyase # Organism: Escherichia coli K12 # 1 434 1 434 434 865 99.0 0 MKTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECTLAQLGAAKMWRLLHGE SKKGYINSLGALTGGQALQQAKAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAV VERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEAGFGGVLNAFELMKAMIEAGA AAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLAADVTGVPTLLVARTDADAADL ITSDCDPHDSEFITGERTSEGFFRTHAGIEQAISRGLAYAPYADLVWCETSTPDLELARR FAQAIHAKYPGKLLAYNCSPSFNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMWF NMFDLANAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSHQQEVGTGYFDKVTTIIQGGTS SVTALTGSTEESQF >gi|296918690|gb|GG773010.1| GENE 161 171997 - 173598 1610 533 aa, chain - ## HITS:1 COG:aceB KEGG:ns NR:ns ## COG: aceB COG2225 # Protein_GI_number: 16131840 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Escherichia coli K12 # 1 533 1 533 533 1098 98.0 0 MTEQATTIDELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQRNKLLAARIQQQQDIDN GMLPDFISETASIRDADWKIRGIPSDLEDRRVEITGPVERKMVINALNANVKVFMADFED SLAPDWNKVIDGQINLRDAVNGTISYSNEAGKIYQLKPNPAVLICRVRGLHLPEKHVTWR GETIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPR GTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQA VTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEERNNQVLDKVKADKSLEANNG HDGTWIAHPGLADTAMAVFNDILGSRKNQLEVMREQDAPITADQLLAPCDGERTEEGMRA NIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLSNGKPVTKALFR QMLGEEMKVIASELGEERFSHGRFDDAARLMEQITTSDELIDFLTLPGYRLLA >gi|296918690|gb|GG773010.1| GENE 162 173867 - 174796 869 309 aa, chain - ## HITS:1 COG:ECs4931 KEGG:ns NR:ns ## COG: ECs4931 COG1897 # Protein_GI_number: 15834185 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 625 99.0 1e-179 MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLMPKKIETENQFLRLLSN SPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQEQNFDGLIVTGAPLGLVEFNDVAY WPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTRTDKLSGVYEHHILHPHALLT RGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGDAYLFASKDKRIAFVTGHPEYDA QTLAQEYFRDVEAGLDPDVPYNYFPHNDPQNTPRASWRSHGNLLFTNWLNYYVYQITPYD LRHMNPTLD >gi|296918690|gb|GG773010.1| GENE 163 174953 - 175396 286 147 aa, chain + ## HITS:1 COG:ECs4930 KEGG:ns NR:ns ## COG: ECs4930 COG0454 # Protein_GI_number: 15834184 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 146 1 146 147 295 97.0 1e-80 MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVHSFLPEAPLWVAVNERD RPVGFMLLSGQHMDALFIDPDVRGCGVGRMLVKHALSMAPELTTNVNEQNEQAVGFYKKV GFKVTGRSEVDDLGKPYPLLNLAYVGV >gi|296918690|gb|GG773010.1| GENE 164 175460 - 175843 283 127 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C4570 NR:ns ## KEGG: UTI89_C4570 # Name: yjaA # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 127 13 139 139 228 100.0 7e-59 MSVLYIQIRRNQITVRDLESKREVSGDAAFSNQRLLIANFFVAEKVLQDLVLQLHPRSTW HSFLPAKRMDIVVSALEMNEGGLSQVEERILHEVVAGATLMKYRQFHIHAQSVVLSDSAV LAMFKQK Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:06:06 2011 Seq name: gi|296918689|gb|GG773011.1| Escherichia coli MS 110-3 genomic scaffold Scfld210, whole genome shotgun sequence Length of sequence - 120948 bp Number of predicted genes - 109, with homology - 108 Number of transcription units - 66, operones - 29 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 849 - 908 3.4 2 2 Tu 1 . + CDS 936 - 1982 253 ## COG5351 Uncharacterized protein conserved in bacteria + Prom 2863 - 2922 4.9 3 3 Op 1 . + CDS 3142 - 3414 147 ## APECO1_1753 hypothetical protein 4 3 Op 2 . + CDS 3389 - 3679 62 ## ECS88_0251 hypothetical protein + Prom 3796 - 3855 4.9 5 4 Op 1 2/0.545 + CDS 3937 - 4116 132 ## COG5433 Transposase + Prom 4122 - 4181 3.2 6 4 Op 2 . + CDS 4216 - 4701 114 ## COG5433 Transposase + Term 4865 - 4907 -0.6 + Prom 4711 - 4770 2.1 7 5 Tu 1 . + CDS 4930 - 5433 146 ## ECS88_0254 hypothetical protein + Term 5521 - 5568 -0.3 + Prom 5442 - 5501 6.0 8 6 Tu 1 . + CDS 5743 - 6015 148 ## ECS88_0255 hypothetical protein + Term 6199 - 6249 3.2 9 7 Tu 1 . - CDS 6286 - 7056 633 ## COG0388 Predicted amidohydrolase - Prom 7117 - 7176 6.7 + Prom 7108 - 7167 3.9 10 8 Tu 1 . + CDS 7210 - 7683 566 ## ECS88_0257 C-lysozyme inhibitor + Term 7709 - 7739 3.0 11 9 Tu 1 . - CDS 7735 - 10179 3014 ## COG1960 Acyl-CoA dehydrogenases - Prom 10266 - 10325 3.2 + Prom 10328 - 10387 4.2 12 10 Tu 1 . + CDS 10419 - 10997 758 ## COG0279 Phosphoheptose isomerase + Term 11009 - 11050 3.3 + Prom 11030 - 11089 3.5 13 11 Tu 1 . + CDS 11202 - 11969 594 ## COG0121 Predicted glutamine amidotransferase + Term 12014 - 12070 7.6 - Term 11896 - 11929 2.1 14 12 Tu 1 . - CDS 11940 - 12680 798 ## COG3034 Uncharacterized protein conserved in bacteria - Prom 12881 - 12940 4.9 + Prom 12907 - 12966 5.1 15 13 Tu 1 . + CDS 13115 - 13741 209 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 13767 - 13796 1.1 + Prom 13762 - 13821 2.3 16 14 Tu 1 . + CDS 13917 - 14414 73 ## COG1943 Transposase and inactivated derivatives + Term 14548 - 14590 -1.0 - Term 14585 - 14625 4.1 17 15 Tu 1 . - CDS 14665 - 16404 1776 ## COG1298 Flagellar biosynthesis pathway, component FlhA - Prom 16454 - 16513 2.0 18 16 Op 1 2/0.545 + CDS 16364 - 17134 754 ## COG1360 Flagellar motor protein 19 16 Op 2 3/0.455 + CDS 17205 - 18260 929 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 20 16 Op 3 . + CDS 18312 - 18605 245 ## COG2161 Antitoxin of toxin-antitoxin stability system 21 16 Op 4 . + CDS 18608 - 19006 272 ## ECS88_0268 toxin YafO 22 16 Op 5 2/0.545 + CDS 19094 - 19468 167 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 19545 - 19604 2.6 23 17 Op 1 5/0.182 + CDS 19658 - 20797 861 ## COG1690 Uncharacterized conserved protein 24 17 Op 2 . + CDS 20794 - 21408 509 ## COG1186 Protein chain release factor B + Term 21650 - 21693 1.7 25 18 Tu 1 . - CDS 21465 - 22922 1822 ## COG2195 Di- and tripeptidases - Prom 23014 - 23073 3.6 + Prom 23064 - 23123 3.2 26 19 Tu 1 6/0.045 + CDS 23183 - 23641 638 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Term 23648 - 23686 9.1 + Prom 23648 - 23707 3.4 27 20 Op 1 . + CDS 23733 - 24977 1156 ## COG1073 Hydrolases of the alpha/beta superfamily 28 20 Op 2 . + CDS 25035 - 25436 527 ## ECUMN_0306 DNA-binding transcriptional regulator Crl + Term 25443 - 25494 0.8 - Term 25433 - 25477 2.4 29 21 Tu 1 . - CDS 25546 - 26601 1080 ## COG3203 Outer membrane protein (porin) - Prom 26685 - 26744 5.8 + Prom 26678 - 26737 8.4 30 22 Op 1 22/0.000 + CDS 26890 - 27993 1111 ## COG0263 Glutamate 5-kinase 31 22 Op 2 . + CDS 28005 - 29258 1314 ## COG0014 Gamma-glutamyl phosphate reductase + TRNA 29373 - 29448 91.5 # Thr CGT 0 0 + Prom 29375 - 29434 78.9 32 23 Tu 1 . + CDS 29603 - 29941 247 ## COG0582 Integrase - Term 30172 - 30212 3.5 33 24 Tu 1 . - CDS 30376 - 30900 93 ## COG1846 Transcriptional regulators - Term 30972 - 31019 11.2 34 25 Op 1 . - CDS 31026 - 33758 1686 ## COG3468 Type V secretory pathway, adhesin AidA 35 25 Op 2 . - CDS 33661 - 35157 480 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 35256 - 35315 11.1 + Prom 36128 - 36187 1.6 36 26 Tu 1 . + CDS 36267 - 36443 61 ## COG1662 Transposase and inactivated derivatives, IS1 family + Prom 37173 - 37232 6.4 37 27 Tu 1 . + CDS 37267 - 37881 241 ## COG3477 Predicted periplasmic/secreted protein + Term 37901 - 37930 -0.9 - Term 38483 - 38524 1.2 38 28 Op 1 . - CDS 38766 - 39476 480 ## APECO1_1708 hypothetical protein 39 28 Op 2 . - CDS 39445 - 41088 1082 ## ECS88_0287 surface or exported protein 40 28 Op 3 . - CDS 41078 - 43603 1709 ## ECS88_0288 hypothetical protein 41 28 Op 4 . - CDS 43629 - 44297 380 ## APECO1_1705 hypothetical protein - Term 44307 - 44337 3.0 42 29 Op 1 . - CDS 44354 - 44941 593 ## JW0287 conserved hypothetical protein 43 29 Op 2 . - CDS 45015 - 45605 230 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 45661 - 45720 3.6 - Term 46545 - 46589 9.4 44 30 Op 1 6/0.045 - CDS 46641 - 46784 245 ## PROTEIN SUPPORTED gi|26246304|ref|NP_752343.1| 50S ribosomal protein L36 45 30 Op 2 . - CDS 46781 - 47047 460 ## PROTEIN SUPPORTED gi|110640565|ref|YP_668293.1| 50S ribosomal protein L31 type B - Prom 47071 - 47130 5.3 46 31 Tu 1 . - CDS 47409 - 47510 90 ## - Prom 47611 - 47670 3.5 - Term 47840 - 47899 -0.7 47 32 Tu 1 . - CDS 47984 - 49126 368 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family - Prom 49159 - 49218 2.1 - Term 49252 - 49291 5.0 48 33 Tu 1 . - CDS 49298 - 50218 631 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 50302 - 50361 3.5 + Prom 50216 - 50275 5.8 49 34 Op 1 9/0.000 + CDS 50378 - 51301 450 ## COG0583 Transcriptional regulator + Prom 51384 - 51443 5.0 50 34 Op 2 . + CDS 51501 - 52394 458 ## COG0583 Transcriptional regulator - Term 52383 - 52416 2.0 51 35 Op 1 2/0.545 - CDS 52425 - 53414 1167 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 52 35 Op 2 . - CDS 53441 - 54292 785 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 53 36 Tu 1 . + CDS 54858 - 59108 2634 ## ECS88_0300 adhesin + Term 59130 - 59171 6.0 - Term 59158 - 59203 11.9 54 37 Tu 1 . - CDS 59256 - 60113 304 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 60250 - 60309 2.9 + Prom 60250 - 60309 4.9 55 38 Tu 1 . + CDS 60361 - 61230 670 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 56 39 Op 1 . - CDS 61390 - 61983 581 ## COG3059 Predicted membrane protein 57 39 Op 2 . - CDS 61995 - 62243 79 ## G2583_0402 hypothetical protein 58 39 Op 3 . - CDS 62340 - 63665 383 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 63830 - 63889 5.0 + Prom 63722 - 63781 8.9 59 40 Tu 1 . + CDS 63892 - 64746 231 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 65148 - 65207 3.4 60 41 Op 1 17/0.000 + CDS 65273 - 65992 651 ## COG0247 Fe-S oxidoreductase 61 41 Op 2 13/0.000 + CDS 66003 - 67430 1120 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 62 41 Op 3 . + CDS 67423 - 68118 476 ## COG1556 Uncharacterized conserved protein + Term 68232 - 68270 3.4 - Term 67919 - 67973 3.0 63 42 Op 1 . - CDS 68192 - 68389 58 ## ECS88_0310 hypothetical protein 64 42 Op 2 . - CDS 68361 - 69029 152 ## ECS88_0311 hypothetical protein - Prom 69148 - 69207 7.8 - Term 69105 - 69135 0.4 65 43 Op 1 . - CDS 69238 - 71535 1630 ## COG3468 Type V secretory pathway, adhesin AidA 66 43 Op 2 . - CDS 71577 - 71900 239 ## c0427 hypothetical protein - Prom 71932 - 71991 2.1 - Term 72120 - 72165 1.9 67 44 Op 1 . - CDS 72355 - 72495 61 ## gi|227884674|ref|ZP_04002479.1| hypothetical protein HMPREF0358_1266 68 44 Op 2 1/0.682 - CDS 72492 - 73286 292 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 73371 - 73430 5.0 69 45 Tu 1 . - CDS 73616 - 73774 59 ## COG0582 Integrase - Prom 73991 - 74050 3.5 70 46 Op 1 10/0.000 - CDS 75250 - 76938 1746 ## COG2303 Choline dehydrogenase and related flavoproteins 71 46 Op 2 6/0.045 - CDS 76952 - 78424 1591 ## COG1012 NAD-dependent aldehyde dehydrogenases 72 46 Op 3 . - CDS 78438 - 79025 557 ## COG1309 Transcriptional regulator - Prom 79112 - 79171 5.6 + Prom 79043 - 79102 3.0 73 47 Tu 1 . + CDS 79154 - 81142 2132 ## COG1292 Choline-glycine betaine transporter + Term 81178 - 81248 31.6 + Prom 81863 - 81922 4.5 74 48 Tu 1 . + CDS 82090 - 83178 825 ## COG2200 FOG: EAL domain + Term 83319 - 83369 1.5 75 49 Op 1 . - CDS 83220 - 84152 858 ## COG0583 Transcriptional regulator 76 49 Op 2 . - CDS 84244 - 84741 357 ## ECS88_0326 hypothetical protein + Prom 84906 - 84965 4.0 77 50 Op 1 . + CDS 84999 - 85604 599 ## COG0666 FOG: Ankyrin repeat 78 50 Op 2 . + CDS 85644 - 86507 527 ## ECS88_0328 hypothetical protein 79 50 Op 3 . + CDS 86497 - 88044 1927 ## COG0074 Succinyl-CoA synthetase, alpha subunit 80 50 Op 4 . + CDS 88044 - 89462 1672 ## ECS88_0330 hypothetical protein + Prom 89482 - 89541 7.2 81 51 Op 1 3/0.455 + CDS 89616 - 90566 1127 ## COG0549 Carbamate kinase 82 51 Op 2 1/0.682 + CDS 90576 - 91958 1321 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases + Prom 92006 - 92065 6.0 83 52 Tu 1 . + CDS 92256 - 92666 223 ## COG4405 Uncharacterized protein conserved in bacteria + Prom 92685 - 92744 5.0 84 53 Op 1 16/0.000 + CDS 92920 - 93903 1157 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 93915 - 93966 10.3 85 53 Op 2 21/0.000 + CDS 93977 - 95461 194 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 86 53 Op 3 11/0.000 + CDS 95454 - 96425 1017 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 87 53 Op 4 2/0.545 + CDS 96422 - 97378 818 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 88 54 Tu 1 . + CDS 97465 - 98514 983 ## COG1064 Zn-dependent alcohol dehydrogenases + Term 98677 - 98715 -0.9 + TRNA 99066 - 99146 28.4 # Pseudo ??? 0 0 - Term 99238 - 99271 -0.4 89 55 Tu 1 . - CDS 99398 - 100066 542 ## COG1280 Putative threonine efflux protein - Prom 100295 - 100354 6.0 + Prom 100035 - 100094 4.5 90 56 Tu 1 . + CDS 100216 - 100491 361 ## ECUMN_0373 hypothetical protein - Term 100544 - 100589 2.7 91 57 Op 1 . - CDS 100592 - 101821 1117 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain 92 57 Op 2 . - CDS 101840 - 102178 445 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Prom 102318 - 102377 4.6 + Prom 102288 - 102347 3.1 93 58 Op 1 9/0.000 + CDS 102417 - 103307 1013 ## COG2513 PEP phosphonomutase and related enzymes 94 58 Op 2 1/0.682 + CDS 103352 - 103873 485 ## COG0372 Citrate synthase + Prom 103875 - 103934 49.9 95 59 Op 1 8/0.000 + CDS 103956 - 104405 485 ## COG0372 Citrate synthase 96 59 Op 2 4/0.273 + CDS 104439 - 105890 1599 ## COG2079 Uncharacterized protein involved in propionate catabolism 97 59 Op 3 2/0.545 + CDS 105930 - 107816 1996 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases + Prom 108044 - 108103 5.7 98 60 Op 1 6/0.045 + CDS 108141 - 109400 1459 ## COG1457 Purine-cytosine permease and related proteins 99 60 Op 2 . + CDS 109390 - 110673 1413 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases + Term 110757 - 110794 2.2 100 61 Op 1 4/0.273 - CDS 110794 - 111405 305 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 101 61 Op 2 3/0.455 - CDS 111471 - 112724 1244 ## COG0477 Permeases of the major facilitator superfamily - Term 112736 - 112768 5.4 102 62 Op 1 . - CDS 112776 - 115574 2432 ## COG3250 Beta-galactosidase/beta-glucuronidase 103 62 Op 2 1/0.682 - CDS 115538 - 115849 126 ## COG3250 Beta-galactosidase/beta-glucuronidase - Prom 115883 - 115942 3.2 104 63 Tu 1 . - CDS 115972 - 117063 1004 ## COG1609 Transcriptional regulators + Prom 117169 - 117228 3.4 105 64 Tu 1 . + CDS 117256 - 117795 590 ## COG3122 Uncharacterized protein conserved in bacteria + Term 117895 - 117942 2.2 106 65 Op 1 12/0.000 - CDS 118021 - 118854 509 ## COG0627 Predicted esterase - Term 118899 - 118931 0.6 107 65 Op 2 2/0.545 - CDS 118947 - 120056 1252 ## COG1062 Zn-dependent alcohol dehydrogenases, class III 108 65 Op 3 . - CDS 120091 - 120366 286 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 120388 - 120447 6.1 - Term 120382 - 120440 19.7 109 66 Tu 1 . - CDS 120555 - 120947 381 ## c0467 hypothetical protein Predicted protein(s) >gi|296918689|gb|GG773011.1| GENE 1 248 - 829 155 193 aa, chain + ## HITS:1 COG:ZvgrE KEGG:ns NR:ns ## COG: ZvgrE COG3501 # Protein_GI_number: 15801686 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 192 479 689 714 126 40.0 3e-29 MTIRSKTYKGSGFNELRFEDATGGEQVYIHAQKNMDTEVLNNRTTDVKADHTETIGNDQK ITVGLGQTVNVGSKKEGGHDQKVTVANDQHLTIKNDRHKVVNNNQTSKVTGTDTEEVVKK QSIKIGDNYELKVEHGTNIISGDSIELICGQGESGTCSIKLEKTGKIIIRGTEFLFEATG PVDIKGKDIHLNG >gi|296918689|gb|GG773011.1| GENE 2 936 - 1982 253 348 aa, chain + ## HITS:1 COG:AGl2375 KEGG:ns NR:ns ## COG: AGl2375 COG5351 # Protein_GI_number: 15891299 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 324 1 340 369 137 28.0 3e-32 MIEMKNNTPFPLLSFEKYGRYGLLFDVIAIKMSLRIKNGFYADLAEFQKELSMSDEYYGE SETSSLKSETDLVLCKRNTDIHVTGSAHAPSGDKSQWKACVRVNSFSKELSLSGVRYLQY ERNRWQMSLPDKIINVPLRYELAYGGIWQPDGMEKLVFSANPVGCGYYPDISQLNTSCQY KLPQITSSALSENATIFNGESDFFQGVGPVSRWWKSRLQYAGTYNEVWREKRYPYLPDDF DERFYNSAHPDMIYTGFLSGDENISLEGFFKFEQVVKTKLPGIRPVLILKTKHNTSHMFL PVADTMVIDLSRQEIYLTWRLTIPDFFGMKEGVLSCIIPECIGKKYYG >gi|296918689|gb|GG773011.1| GENE 3 3142 - 3414 147 90 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1753 NR:ns ## KEGG: APECO1_1753 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 90 390 479 479 186 100.0 2e-46 MTSLANKLNKFDVGWEGNAVSESSLYALSNTGSWGAMMWDSGSKVGHWVLVKGVDDAGNV IIYDPYQGSRYLMTEQEFKEVWNGHSVYKP >gi|296918689|gb|GG773011.1| GENE 4 3389 - 3679 62 96 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0251 NR:ns ## KEGG: ECS88_0251 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 96 1 96 96 190 100.0 1e-47 MGIVFTNHNIDLLSVEFDEITKNCNYTFSVDGETAIFTARISIIRNIKGIKYSEELDKFI MSIMPLQPKVSKILGGVTWDCICGKEVGFPVRLIGK >gi|296918689|gb|GG773011.1| GENE 5 3937 - 4116 132 59 aa, chain + ## HITS:1 COG:ECs0241 KEGG:ns NR:ns ## COG: ECs0241 COG5433 # Protein_GI_number: 15829495 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli O157:H7 # 1 59 1 59 378 75 61.0 2e-14 MELKKLMEHISIIPDYRQAWKVEHKLPDILSVNYLRRYFWCIMLGRYRGFGETHLDFLK >gi|296918689|gb|GG773011.1| GENE 6 4216 - 4701 114 161 aa, chain + ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 37 161 234 358 378 215 85.0 2e-56 MRDCHSSDDKDVIAIDGKTLRHSYDKSRRKGAIYVIKIRLHIICDVPDELIDFTFEWKEL KKLCMAVSFRSIITEQKKEPEMTDRYYSISADLTAEKFATANRNHWYVENKLHWHLDVVM NKDDCKIRRGNAAELFSGIRKIAINILTKDKILKAGARCKM >gi|296918689|gb|GG773011.1| GENE 7 4930 - 5433 146 167 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0254 NR:ns ## KEGG: ECS88_0254 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 167 1 167 167 315 100.0 5e-85 MVDIVEADKTDIYFIQESVYGKIGLPAFGNTIGPSAQQVVKKVFAVVKERDKTHAKQRLL LEYNGNKLWMNAIDGSEAILPTEFSKRYELSLFNTTNFGEDPFPDVNLYNNMKSSFFVRF GGTSHPEAWAIYNASTKEVKYIETAREIDKIFSDFNLSGTLPIHIGQ >gi|296918689|gb|GG773011.1| GENE 8 5743 - 6015 148 90 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0255 NR:ns ## KEGG: ECS88_0255 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 90 81 170 170 170 100.0 2e-41 MKRQLLTGWGPVFIIGDDPFSLRWMSEHLEILKSLNALGLVVNVESVERMEVLQQRADGL LLLPVICDNFVQALQLNAYPVLITEMEISQ >gi|296918689|gb|GG773011.1| GENE 9 6286 - 7056 633 256 aa, chain - ## HITS:1 COG:ECs0246 KEGG:ns NR:ns ## COG: ECs0246 COG0388 # Protein_GI_number: 15829500 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 255 1 255 256 526 99.0 1e-149 MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQD DVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHY KAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTAR AIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMMALREY REKFPAWRDADEFRLW >gi|296918689|gb|GG773011.1| GENE 10 7210 - 7683 566 157 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0257 NR:ns ## KEGG: ECS88_0257 # Name: ivy # Def: C-lysozyme inhibitor # Organism: E.coli_S88 # Pathway: not_defined # 1 157 1 157 157 296 100.0 2e-79 MGRISPGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQGHKLPAWV MKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQE KLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK >gi|296918689|gb|GG773011.1| GENE 11 7735 - 10179 3014 814 aa, chain - ## HITS:1 COG:yafH KEGG:ns NR:ns ## COG: yafH COG1960 # Protein_GI_number: 16128207 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli K12 # 1 814 13 826 826 1665 99.0 0 MMILSILATVVLLSALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNF APMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRL TAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSA YAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKNHYLPRLARGQEIPCFAL TSPEAGSDAGAIPDTGIVCMGEWQGQQVMGMRLTWNKRYITLAPIATVLGLAFKLSDPEK LLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAG QGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAYIRRQFKISIGKMEGIEEPLARI AGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQS NFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLF KHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGS LKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLL QNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHN PVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALAKGLIDKDEAAILVKAE ESRLRSINVDDFDPEELATKPVKLPEKVRKVEAA >gi|296918689|gb|GG773011.1| GENE 12 10419 - 10997 758 192 aa, chain + ## HITS:1 COG:ECs0249 KEGG:ns NR:ns ## COG: ECs0249 COG0279 # Protein_GI_number: 15829503 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Escherichia coli O157:H7 # 1 192 1 192 192 373 100.0 1e-103 MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM HFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGIST SGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIH ILIQLIEKEMVK >gi|296918689|gb|GG773011.1| GENE 13 11202 - 11969 594 255 aa, chain + ## HITS:1 COG:yafJ KEGG:ns NR:ns ## COG: yafJ COG0121 # Protein_GI_number: 16128209 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Escherichia coli K12 # 1 255 1 255 255 543 99.0 1e-154 MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPI AKLVQDYPIKSCSVLAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETG NFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRQKGVFNMLLSDGR YVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKI MPGEWRLFCLGECVV >gi|296918689|gb|GG773011.1| GENE 14 11940 - 12680 798 246 aa, chain - ## HITS:1 COG:ECs0251 KEGG:ns NR:ns ## COG: ECs0251 COG3034 # Protein_GI_number: 15829505 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 491 100.0 1e-139 MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNA YDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTD ANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNY TLPEAK >gi|296918689|gb|GG773011.1| GENE 15 13115 - 13741 209 208 aa, chain + ## HITS:1 COG:yafL KEGG:ns NR:ns ## COG: yafL COG0791 # Protein_GI_number: 16128213 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli K12 # 1 208 42 249 249 417 97.0 1e-117 MQNRARLLKQYQTHLKKQASYIVEGNAKSRRALRQHNREQIKQHPEWFPAPLKASDRRWQ ALVENNHFLSSDHLHNITEVAIHRLEQQLGKPYIWGGTRPDKGFDCSGLVFYAYNKILEA KLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGET IRVSRLAEPFWQDHFLGARRILTEETIL >gi|296918689|gb|GG773011.1| GENE 16 13917 - 14414 73 165 aa, chain + ## HITS:1 COG:yafM KEGG:ns NR:ns ## COG: yafM COG1943 # Protein_GI_number: 16128214 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 164 1 164 165 315 95.0 2e-86 MSEYRRYYIKGGTWFFTVNLQNRRNQLLTTQFQTLRNVIIKVKRDRPFEINAWVVLPEHM HCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHAIRNTKDYRHHVDYIYINP VKHGWVKQVSDWPFSTFHRDVAKGLYPIDWAGDVTDFSAGERIIL >gi|296918689|gb|GG773011.1| GENE 17 14665 - 16404 1776 579 aa, chain - ## HITS:1 COG:ECs0257 KEGG:ns NR:ns ## COG: ECs0257 COG1298 # Protein_GI_number: 15829510 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhA # Organism: Escherichia coli O157:H7 # 1 578 1 578 579 1077 97.0 0 MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQTQAQT RRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYV LMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRNQLLASPSVLYTATGIMFVLA VVPGMPHFPFLMFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTMTETSEQQVSWETIPL IEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYA IFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGY QVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSMAPRLAEDLSAALNYSQLLKV YRTLLTEGVSLRDIVTIATVLVASSAVTKDHILLAADVRLVLRRSITHPFVRKQELTVYT LNNELENLLTNVVNQAQQAGKVMLDSVPVDPNMLNQFQITMPQVKEQMKAAGKDPVLLVP LQLRPLLARYARLFAPGLHVLSYNEVLDELELKIMGALM >gi|296918689|gb|GG773011.1| GENE 18 16364 - 17134 754 256 aa, chain + ## HITS:1 COG:mbhA KEGG:ns NR:ns ## COG: mbhA COG1360 # Protein_GI_number: 16128216 # Func_class: N Cell motility # Function: Flagellar motor protein # Organism: Escherichia coli K12 # 1 256 6 261 261 464 97.0 1e-131 MIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSHLPKPATVAVPEETEKKARDVN EKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGS AKIMPFFKTLLVELAPVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEE AGMPENKVMQVSAMADQMLLDAKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQP LVQKLDKQQVLSQRAR >gi|296918689|gb|GG773011.1| GENE 19 17205 - 18260 929 351 aa, chain + ## HITS:1 COG:dinP KEGG:ns NR:ns ## COG: dinP COG0389 # Protein_GI_number: 16128217 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 351 1 351 351 711 99.0 0 MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTG MALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSAT LIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAK IPGVGKVSAAKLEAMGLRTCGDVQKCDLVTLLKRFGKFGRILWERSQGIDERDVNSERLR KSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQ EHVWPRLNKSDLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL >gi|296918689|gb|GG773011.1| GENE 20 18312 - 18605 245 97 aa, chain + ## HITS:1 COG:yafN KEGG:ns NR:ns ## COG: yafN COG2161 # Protein_GI_number: 16128218 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Antitoxin of toxin-antitoxin stability system # Organism: Escherichia coli K12 # 1 97 1 97 97 166 100.0 7e-42 MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSASAFEALMDMLAEQEEKK PIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE >gi|296918689|gb|GG773011.1| GENE 21 18608 - 19006 272 132 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0268 NR:ns ## KEGG: ECS88_0268 # Name: yafO # Def: toxin YafO # Organism: E.coli_S88 # Pathway: not_defined # 1 132 1 132 132 267 100.0 1e-70 MRVFKTKLIRLQLTAEELEALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAH IHLANVNNPFPPQLRQFSRTNDAAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHK IGKMAEAFRMRF >gi|296918689|gb|GG773011.1| GENE 22 19094 - 19468 167 124 aa, chain + ## HITS:1 COG:yafP KEGG:ns NR:ns ## COG: yafP COG0454 # Protein_GI_number: 16128220 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 124 27 150 150 229 93.0 8e-61 MTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCIGHYIDMLFVEPE YTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGTWFTNFYMRY KPQH >gi|296918689|gb|GG773011.1| GENE 23 19658 - 20797 861 379 aa, chain + ## HITS:1 COG:PA5471 KEGG:ns NR:ns ## COG: PA5471 COG1690 # Protein_GI_number: 15600664 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 1 375 1 375 379 452 60.0 1e-127 MGKYIRPLSDAVFTIASDDLWIESSAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAF FSVGRFYPALVGNDIGCGMALWQTDILARKYNADKFEKRLSDLDDVAEESWLEENLPSAF AQHPWRNSLGSIGGGNHFAELQQIDQIIDAELFALAGLDAQHLQLLVHSGSRGLGQSILQ RHIASFSHHGLPEGSDDALRYIAEHDDALAFARINRQLIALRIMQQVKATGSPVLDVAHN FVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGAGRKW GRTECKGRLAAKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVLAGLII PVARLRPVLTLKNSGGKKG >gi|296918689|gb|GG773011.1| GENE 24 20794 - 21408 509 204 aa, chain + ## HITS:1 COG:STM0315 KEGG:ns NR:ns ## COG: STM0315 COG1186 # Protein_GI_number: 16763697 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Salmonella typhimurium LT2 # 1 201 1 201 204 323 81.0 2e-88 MILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDG DNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADEQEQSDAIRYETLRSSGPG GQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALKSQR RMFHHQIERGNPRRTFTGMAFIEG >gi|296918689|gb|GG773011.1| GENE 25 21465 - 22922 1822 485 aa, chain - ## HITS:1 COG:ECs0264 KEGG:ns NR:ns ## COG: ECs0264 COG2195 # Protein_GI_number: 15829518 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 1 485 1 485 485 985 99.0 0 MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKP ATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGM ASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWLQADILINTDSEEEGEIYMGC AGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAE ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVDTYQEILKNELAEKEKNLAL LLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEI HCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFN KTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLK EIPAK >gi|296918689|gb|GG773011.1| GENE 26 23183 - 23641 638 152 aa, chain + ## HITS:1 COG:STM0317 KEGG:ns NR:ns ## COG: STM0317 COG0503 # Protein_GI_number: 16763699 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Salmonella typhimurium LT2 # 1 152 1 152 152 307 98.0 4e-84 MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCI SSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFITIFAKPAGRP LVDDYVVDIPQNTWIEQPWDMGVVFVPPISGR >gi|296918689|gb|GG773011.1| GENE 27 23733 - 24977 1156 414 aa, chain + ## HITS:1 COG:yafA KEGG:ns NR:ns ## COG: yafA COG1073 # Protein_GI_number: 16128225 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 414 1 414 414 867 99.0 0 MTQANLSETLFKPRFKHPETSTLVRRFSHGAQPPVQSALDGKTIPHWYRMINRLMWIWRG IDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQL SGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAP ITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWK LTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVV HTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLS GYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYRNFDKGLQEITDWIEKRLC >gi|296918689|gb|GG773011.1| GENE 28 25035 - 25436 527 133 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0306 NR:ns ## KEGG: ECUMN_0306 # Name: crl # Def: DNA-binding transcriptional regulator Crl # Organism: E.coli_UMN026 # Pathway: not_defined # 1 133 1 133 133 267 99.0 8e-71 MTLPSGHPKSRLVKKFTALGPYIREGKCEDNRFFFDCLAVCVNVKPAPEVREFWGWWMEL EAQESRFTYSYQFGLFDKAGDWTSVQIKDAEVVERLEHTLREFHEKLRELLATLNLKLEP ADDFRDEPVKLTA >gi|296918689|gb|GG773011.1| GENE 29 25546 - 26601 1080 351 aa, chain - ## HITS:1 COG:ECs0268 KEGG:ns NR:ns ## COG: ECs0268 COG3203 # Protein_GI_number: 15829522 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 351 1 351 351 621 98.0 1e-178 MKKSTLALVVMGIVASVSVQAAEIYNKDGNKLDVYGKVKAMHYMSDNDSKDGDQSYIRFG FKGETQINVQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALY DVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRD VKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDAN NIYLATFYSETRKMTPISGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDE DLVNYVDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF >gi|296918689|gb|GG773011.1| GENE 30 26890 - 27993 1111 367 aa, chain + ## HITS:1 COG:ECs0269 KEGG:ns NR:ns ## COG: ECs0269 COG0263 # Protein_GI_number: 15829523 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 692 100.0 0 MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHL GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDT LRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPR SNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPG VIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAGEITVDEGATAAILERGSSLLPKGI KSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVH RDDMITR >gi|296918689|gb|GG773011.1| GENE 31 28005 - 29258 1314 417 aa, chain + ## HITS:1 COG:ECs0270 KEGG:ns NR:ns ## COG: ECs0270 COG0014 # Protein_GI_number: 15829524 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Escherichia coli O157:H7 # 1 417 1 417 417 774 98.0 0 MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSESILNANAQDVADARANGLSE AMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRVPLGVIGVIYE ARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQDALKSCGLPAGAVQAIDNPD RALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESAEIAEALK VIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALAQLQAGPAK VVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIREHGTQHSDAILTRDMRNAQRFVNEVD SSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGIGDYTIRA >gi|296918689|gb|GG773011.1| GENE 32 29603 - 29941 247 112 aa, chain + ## HITS:1 COG:YPO0887 KEGG:ns NR:ns ## COG: YPO0887 COG0582 # Protein_GI_number: 16121192 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Yersinia pestis # 1 111 1 111 404 140 63.0 6e-34 MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPGGGEYWRLKYRIAGKEKLLALGVYPEVT LADAPAKLEEAKRGISGGIDLMEVKREEKIARETQLNNTFKDIALEWHSNKL >gi|296918689|gb|GG773011.1| GENE 33 30376 - 30900 93 174 aa, chain - ## HITS:1 COG:YPO3266 KEGG:ns NR:ns ## COG: YPO3266 COG1846 # Protein_GI_number: 16123423 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 17 172 8 163 170 79 30.0 4e-15 MSFLLPCGGIMNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEY RINTSTFMVLVSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEKKNIAKRINNKNDRR SKSICLTPDGVTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLNVN >gi|296918689|gb|GG773011.1| GENE 34 31026 - 33758 1686 910 aa, chain - ## HITS:1 COG:YPO2796 KEGG:ns NR:ns ## COG: YPO2796 COG3468 # Protein_GI_number: 16122995 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 503 910 224 638 638 73 22.0 1e-12 MPAAARQSCWQTTSRLIRTIYPGATGGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTAN ITLDYQTRPANVKVNEWSSSNRGTVGSLYIYNNPYTHTVDYFILKTSSYGWFPTGQVSNE HWEYVGHDQNSAQALLANRINNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMSGT FTQENGRLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVL KDTDFGLGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSV FNGTVNLDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENSTLTSTALNLNKGANVLAS QSFVSDGPVNISDATLSLNSRPDEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNI NVQDKGTVTLGGEGELSPDLTLQNQMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNG NSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHD NSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEW VLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSG SADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYAS GLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQ AELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYE FDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDD AINANIRYSF >gi|296918689|gb|GG773011.1| GENE 35 33661 - 35157 480 498 aa, chain - ## HITS:1 COG:NMB1998 KEGG:ns NR:ns ## COG: NMB1998 COG3468 # Protein_GI_number: 15677826 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Neisseria meningitidis MC58 # 38 494 11 486 1431 274 39.0 3e-73 MNKIYALKYCYITNTVKVVSELARRVCKGSTRRGKRLSVLTSLALSALLPTVAGASTVGG NNPYQTYRDFAENKGQFQAGATNIPIFNNKGELVGHLDKAPMVDFSSVNVSSNPGVATLI NPQYIASVKHNKGYQSVSFGDGQNSYHIVDRNEHSSSDLHTPRLDKLVTEVAPATVTSSS TADILNPSKYSAFYRAGSGSQYIQDSQGKRHWVTGGYGYLTGGILPTSFFYHGSDGIQLY MGGNIHDHSILPSFGEAGDSGSPLFGWNTAKGQWELVGVYSGVGGGTNLIYSLIPQSFLS QIYSEDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFL GHNGQIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNL HKIGEGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQ QVNPDNISWGYRGGGSGC >gi|296918689|gb|GG773011.1| GENE 36 36267 - 36443 61 58 aa, chain + ## HITS:1 COG:ECs1301 KEGG:ns NR:ns ## COG: ECs1301 COG1662 # Protein_GI_number: 15830555 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli O157:H7 # 1 57 74 130 145 72 63.0 3e-13 MPKEKYLTGKIFTQRIERNNLTLRTRIKRLVSKTICFSRSVEIHEKVIGSFIEKHMFY >gi|296918689|gb|GG773011.1| GENE 37 37267 - 37881 241 204 aa, chain + ## HITS:1 COG:ECs0317 KEGG:ns NR:ns ## COG: ECs0317 COG3477 # Protein_GI_number: 15829571 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Escherichia coli O157:H7 # 1 204 1 204 204 407 99.0 1e-114 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA AGQIDCSRNFLNPPYIFLRDWLGLTDPNSAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE IIRRDLRNRITHEPDPEIPLGSNR >gi|296918689|gb|GG773011.1| GENE 38 38766 - 39476 480 236 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1708 NR:ns ## KEGG: APECO1_1708 # Name: yagV # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 236 16 251 251 478 100.0 1e-134 MFRRRGVTLTKALLTVVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRI AISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFRE VPTRNLTKRSPSGGEVSTEPVVVMDTILVVRPRQVQFKWSFDQVTGTVSNTGNTWFKLLI KPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD >gi|296918689|gb|GG773011.1| GENE 39 39445 - 41088 1082 547 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0287 NR:ns ## KEGG: ECS88_0287 # Name: yagW # Def: surface or exported protein # Organism: E.coli_S88 # Pathway: not_defined # 1 547 1 547 547 1057 100.0 0 MRVNLLIAMIIFALIWPATALRAAVSKTTWADAPAREFVFVENNSDDNFFVTPGGALDPR LTGANRWTGLKYNGSGTIYQQSLGYIDNGYNTGLYTNWKFDMWLENSPVSSPLTGLRCIN WYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLSDAFYQYLQQMPVGSSFTMTI NACQTSVNYDANSGARCKDQASGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLG EGNADCRTQTIGSRSGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSL NGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTT SPESGWYEFSTSNTLIIKPRDFSISIISDEYTQTPSREGYVGSGESALDFGYIVTTSGKT AADEVLIKVTGPAQVIGGRSYCVFSSDDGKAKVPFPATLSFITRNGATKTYDAGCDDSWR DMTDALWLTTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQ ATWRNIN >gi|296918689|gb|GG773011.1| GENE 40 41078 - 43603 1709 841 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0288 NR:ns ## KEGG: ECS88_0288 # Name: yagX # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 841 1 841 841 1572 100.0 0 MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYI HLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASVSEQTRQQLMTLANAPFNE ALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSEDIGQSSVNTLSSNLSYNFGVY NNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRF AGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLT RDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEVIVNGRVISKRTQRVNKLFSRGRGVGA PLAWQIWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSLSTFSWAATGYGYDNQAVGET RLTLPLGGAINVNLQNMLASDSSWSNIASISATLPGGFSSLWVNQEKTRIGNQLRRSDAD NRAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQSVYSGTFGSLGLRAGIQRY NNGDSSANTGKYIALDLSLPLGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSR AISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYINTNLTANGSVGWQGKNIAASG RTDGNAGVIFDTGLENDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSY DIVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENG EFVMDVDKKYPTIDFRYSGNKTCEVALELNQARGAVWVGDVVCSGLSSWAAVTQTGEENE S >gi|296918689|gb|GG773011.1| GENE 41 43629 - 44297 380 222 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1705 NR:ns ## KEGG: APECO1_1705 # Name: yagY # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 222 17 238 238 421 100.0 1e-116 MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIQNSTDSGRLINIRLERLSS PLDDGQVIAMDKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDA QRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLTNTGNATLRILAYGPCLKAAN GKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK >gi|296918689|gb|GG773011.1| GENE 42 44354 - 44941 593 195 aa, chain - ## HITS:1 COG:no KEGG:JW0287 NR:ns ## KEGG: JW0287 # Name: yagZ # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 195 1 195 195 286 99.0 4e-76 MKKKVLAIALVTVFTGTGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEG IKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTG DTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSIISGTTNGTTAVTDYSTLPEGI WSGDVSVQFDATWTS >gi|296918689|gb|GG773011.1| GENE 43 45015 - 45605 230 196 aa, chain - ## HITS:1 COG:ECs0324 KEGG:ns NR:ns ## COG: ECs0324 COG2771 # Protein_GI_number: 15829578 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 365 99.0 1e-101 MTWQNDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKD FVFINLNTDSLTEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLS RDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMLPKSIARIENCSVKTVYTHR RNAEAKLYSKLYKLVQ >gi|296918689|gb|GG773011.1| GENE 44 46641 - 46784 245 47 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|26246304|ref|NP_752343.1| 50S ribosomal protein L36 [Escherichia coli CFT073] # 1 47 1 47 47 99 100 9e-20 MMKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKKR >gi|296918689|gb|GG773011.1| GENE 45 46781 - 47047 460 88 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|110640565|ref|YP_668293.1| 50S ribosomal protein L31 type B [Escherichia coli 536] # 1 88 1 88 88 181 100 1e-44 MMKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTG KLRTVASEGNVARFTQRFGRFVSTKKGA >gi|296918689|gb|GG773011.1| GENE 46 47409 - 47510 90 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKNKVQQISHKLINIVVFVAIVEYAYLFLHFY >gi|296918689|gb|GG773011.1| GENE 47 47984 - 49126 368 380 aa, chain - ## HITS:1 COG:ECs0331 KEGG:ns NR:ns ## COG: ECs0331 COG1902 # Protein_GI_number: 15829585 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli O157:H7 # 1 380 1 380 380 760 98.0 0 MTNKHPSLFSPFMLTEKIKLRNRIVMAPMTTWSANPDGTISEQELEFYKRRSQNVGLVIT GCTYVTPSGIGFTHEFAAYDDRFINSLEKLAAAAKSGGAPAILQIFHAGNKAIPELVPNN DVISASASSVKSGDFMKRVVQSREMTENEIQETIRAFGDVTKRAIKAGFDGVELHGAHGF LLQNFFSPLFNQRNDRWGGDLEGRMRFPLAVLQEVKNVVYEYATKPFAIGYRISPEESVT GGLRIEDTYKLLDRLISSGISYIHTSLVSINDSYPVESPNGPRTIELILNHIAGRVPVIA AGKIRTPSQAQEAISAGLPLVAIGKGLVINPEWVTLAESGRSHEIQTALNPQRVPELTIP DKLWDQIQASKGTGWFPLMD >gi|296918689|gb|GG773011.1| GENE 48 49298 - 50218 631 306 aa, chain - ## HITS:1 COG:ECs0332 KEGG:ns NR:ns ## COG: ECs0332 COG1073 # Protein_GI_number: 15829586 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 587 98.0 1e-167 MKTVSIKHTYWDIAADIYFPDDFNSEKKYPAIISAHPIGSCKEQTSGSVYGAALAKAGFI VIAFDASFQGSSGGEPRYLEDPTMRVKDFSIVVDYLTTLPYVDAGRIGVLGICGGGGYAI NAAMTERRIKAIGTVTGANYGRLMREGFTAFNPIGALEAMAQQRTDEANGAKLRVDDLLP SSPEAALEAGLTEIDLFEATEYYRSPRGCAPNGVNRSLFSHQTVAVGWDAFHLAEVLLTQ PLMVVVGDRVGAFGAYRDGCEIIGRAASKHKELVVVEGYSHYDLYDKPEPVKQALDKLIP FYKTHL >gi|296918689|gb|GG773011.1| GENE 49 50378 - 51301 450 307 aa, chain + ## HITS:1 COG:Z0371 KEGG:ns NR:ns ## COG: Z0371 COG0583 # Protein_GI_number: 15800008 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 1 307 23 329 329 605 97.0 1e-173 MKIEPSILPSLAWFALIVRAGSFSRAASEMGITRAALSQNLKSLEERLNTKLIYRTTRNM SLTEEGQHLYEVLVSALGQIDDALKDVGDTQLEPTGLLRINSSRVAARMLVEPHIGEFLT RYPKTKIELIMDDGLSNIIADGCDVGIRLEQGLDEHMTAVPVSPLIKLVTVASPDYLKEH GIPETPQELSNHNCLRLRHKSSGALSAWEFSNVVGGNEEFEIEVSGKYISNDDESMIRMA LNGTGIIQHLDFAIAEHINAGKLQPILEDWAVSFPGFYIYVSSRVRMPSKVRAFIDFMVE KRVKIES >gi|296918689|gb|GG773011.1| GENE 50 51501 - 52394 458 297 aa, chain + ## HITS:1 COG:YPO2807 KEGG:ns NR:ns ## COG: YPO2807 COG0583 # Protein_GI_number: 16123005 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 297 1 297 297 509 84.0 1e-144 MLKENFNELQIFLVVARERSFTKAAGKLGVSQSALSHAMKALEERLNIRLLTRTTRSVAP TEAGERIIACLEPRIDELEQELESLIQLNGTPSGNIRLSAGEHAARSLVWPKLKPFLREY PEINVELVVDNGFVDIVEGRFDAGIRLGENVDKDMVAVRIGPDMRMAVVGAPAYFAANPA PETPHELQNHRCINMRLPTAGGLYHWEFEREGKPLRVKVDGQLTCSPLPERIDAALSGFG IACVPEDMVQEYIESGKLIQVLQEWCPTFPGYYLYYPSRKQHPPAFALLIDALRYTE >gi|296918689|gb|GG773011.1| GENE 51 52425 - 53414 1167 329 aa, chain - ## HITS:1 COG:YPO2806 KEGG:ns NR:ns ## COG: YPO2806 COG0667 # Protein_GI_number: 16123004 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Yersinia pestis # 1 329 1 329 329 593 90.0 1e-169 MQKRYLGKSGLEVSALGLGCMGLSHGYGPATDTRQAIELIRAAIERGVTFFDTAEVYGPY LNEEVVGEALKPFRDRVVIATKFGFTFGDDNKQQILNSRPEHIREAVEGSLRRLKTDVID LLYQHRVDPDVPIEDVAGTVKDLIAEGKVKHFGLSEAGAQTIRRAHAVQPVTALQSEYSM WWREPEQEILPLLEELGIGFVPFSPLGKGFLTGAIKPGTTFGKDDYRSTVPRFAAQAIEA NEKLVTLLGELAAEKGVTSAQIALAWLLAQKPWIVPIPGTTKLHRLEENLAAADIVLSQK DTQQISEALETIKIVGERYSPEHQARVGR >gi|296918689|gb|GG773011.1| GENE 52 53441 - 54292 785 283 aa, chain - ## HITS:1 COG:YPO2805 KEGG:ns NR:ns ## COG: YPO2805 COG0656 # Protein_GI_number: 16123003 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Yersinia pestis # 1 283 15 297 297 535 91.0 1e-152 MQKVKLNNGIEMPLLGFGVFQMTDAAECERAVIDAINSGYRLIDTAASYQNEIQVGNALK QSGIARNELFVTTKLWLQDTSYEGAKAQFERSLNRLQLDYVDLYLIHQPYGDVHGAWRAM EELQQAGKIRAIGVSNFHPDRLADLIAFNNVVPAVNQVEVNPFNQQLQAVPWMQSRGIQP EAWAPFAEGKNGLFQHPVLTAIGEKYGKSVGQVVLRWIYQRGIVSLAKSVRKERMEENIN ILDFELSPEDMLQITALDTATSAFFSHRDPAMVEWLTGRKLDV >gi|296918689|gb|GG773011.1| GENE 53 54858 - 59108 2634 1416 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0300 NR:ns ## KEGG: ECS88_0300 # Name: not_defined # Def: adhesin # Organism: E.coli_S88 # Pathway: not_defined # 1 1416 1 1416 1416 2461 100.0 0 MSRYKTDNKQPRFRYSVLARCVAWANISVQVLFPLAVTFTPVMAARAQHAVQPRLSMENT TVTADNNVEKNVASLAANAGTFLSSQPDSDATRNFITGMATAKANQEIQEWLGKYGTARV KLNVDKNFSLKDSSLEMLYPIYDTPTNMLFTQGAIHRTDDRTQSNIGFGWRHFSENDWMA GVNTFIDHDLSRSHTRIGVGAEYWRDYLKLSANGYIRASGWKKSPDVEDYQERPANGWDI RAEGYLPAWPQLGASLMYEQYYGDEVGLFGKDKRQKDPHAITAEVNYTPVPLLTLSAGHK QGKSGENDTRFGLEVNYRIGEPLEKQLDTDSIRERRMLAGSRYDLVERNNNIVLEYRKSE VIRIALPERIEGKGGQTVSLGLVVSKATHGLKNVQWEAPSLLAAGGKITGQGNQWQVTLP AYQAGKDNYYAISAIAYDNKGNASKRVQTEVVISGAGMSADRTALTLDGQSRIQMLANGN EQKPLVLSLRDAEGQPVTGMKDQIKTELTFKPAGNIVTRTLKATKSQAKPTLGEFTETEA GVYQSVFTTGTQSGEATITVSVDDMSKTVTAELRATMMDVSNSTLSANEPSGDVVADGQQ AYTLTLTAVDSEGNPVTGEASRLRLVPQDTNGVTVGAISEIKPGVYSATVSSTRAGNVVV RAFSEQYQLGTLQQTLKFVAGPLDAAHSSITLNPDKPVVGGTVTAIWTAKDANDNPVTGL NPDAPSLSGAAAAGSTASGWTDNGDGTWTAQISLGTTAGELDVMPKLNGQDAAANAAKVT VVADALSSNQSKVSVAEDHVKAGESTTVTLVAKDAHGNAISGLSLSASLTGTASEGATVS SWTEKGDGSYVATLTTGGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNK TPTVKTTTELTFTMKDAYGNPVTGLKPDAPVFSGAASTGSERPSAGNWTEKGNGVYVSTL TLGSAAGQLSVMPRVNGQNAVAQPLVLNVAGDASKAEIRDMTVKVNNQLANGQSANQITL TVVDSYGNPLQGQEVTLTLPQGVTSKTGNTVTTNAAGKVDIELMSTVAGELEIEASVKNS QKTVKVKFKADFSTGQASLEVDAAAQKVANGKDAFTLTATVKDQYGNLLPGAVVVFNLPR GVKPLADGNIMVNADKEGKAELKVVSVTAGTYEITASAGNDQPSNAQSVTFVADKTTATI SSIEVIGNRAVADGKTKQTYKVTVTDANNNLLKDSEVTLTASPENLVLTPNGTATTNEQG QAIFTATTTVAATYTLTAKVEQADGQESTKTAESKFVADDKNAVLAASPERVDSLVADGK TTATLTVTLMSGVNPVGGTMWVDIEAPEGVTEADYQFLPSKNDHFASGKITRTFSTNKPG TYTFTFNSLTYGGYEMKPVTVTINAVPADTEGAEEK >gi|296918689|gb|GG773011.1| GENE 54 59256 - 60113 304 285 aa, chain - ## HITS:1 COG:ECs0337 KEGG:ns NR:ns ## COG: ECs0337 COG2207 # Protein_GI_number: 15829591 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 285 12 296 296 565 96.0 1e-161 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC RAAILVRLSAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI RQQQKTECRLVNFPETPIFGNSFKYDIEVSNKLPDEEVKLRRHHLVRCMKNFKTDIYFVS TFEPSTKSVDLLTVETFAGTVCKQTDSEMPKEWTINRGLYASFRYEGEWEHYPEWARNLY LMELPARGLARVNGSDIERFYYNENFVEIDSNNIVCEIFIPVRPV >gi|296918689|gb|GG773011.1| GENE 55 60361 - 61230 670 289 aa, chain + ## HITS:1 COG:ECs0338 KEGG:ns NR:ns ## COG: ECs0338 COG0656 # Protein_GI_number: 15829592 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 599 99.0 1e-171 MEFSVLSNNLKMPMMGFGVFQVTDKDVCKQSVLNAIRTGYRLIDTAAVYGNEDAVGEAVR EAISEGLCTREELFITSKLWVQDMLNQDIAAAGIEASLKKSGLEYFDLYLLHQAMRDYFS AWRALEDAYEEGKLKAIGVSNFYPHVLANFCETVRVKPMVNQVELHPYFAQPEALATMKY YNVQPEAWAPLGGGRHKPFENNLLQSIADAHQKSISQVILRWNIQRGVVVIPKSTHQQRI EENFAIWDFSLTEKEMAQISSLDLGYVGESVKHFNPEFVRGCLAVKIHD >gi|296918689|gb|GG773011.1| GENE 56 61390 - 61983 581 197 aa, chain - ## HITS:1 COG:ykgB KEGG:ns NR:ns ## COG: ykgB COG3059 # Protein_GI_number: 16128286 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 197 4 200 200 385 98.0 1e-107 MERYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSITPFVANSPLMSFFYEHP EDYKQHLTHEGEYKPEARAWQTANNTYGFSNGLGVVEVIIALLVLANPVNRWLGLLGGLM AFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLVLKDTLMLAGAVMIMADSARD ILKQRSNESSSTLKTEY >gi|296918689|gb|GG773011.1| GENE 57 61995 - 62243 79 82 aa, chain - ## HITS:1 COG:no KEGG:G2583_0402 NR:ns ## KEGG: G2583_0402 # Name: ykgI # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 82 2 83 83 119 96.0 4e-26 MVFYMFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLENAIADMARKYNA SSWKVTSMRIDNNSTATAVLYK >gi|296918689|gb|GG773011.1| GENE 58 62340 - 63665 383 441 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 433 1 444 458 152 26 9e-36 MNKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQ HTDFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPGRNLEIHG EKIFINTGAQAVVPPIPGITTTPGVYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANF GSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHVERISHHENQVQVHSEHAQ LAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKQLHTTADNIWAMGDVTGGLQFT YISLDDYRIVRDELLGEGRRSTDDRKNVPYSVFMTPPLSRVGMTEEQARESGADIQVVTL PVAAIPRARVMNDTRGVLKAIVDNKTQRILGASLLCVDSHEMINIVKMVMDAGLPYSILR DQIFTHPSMSESLNDLFSLVK >gi|296918689|gb|GG773011.1| GENE 59 63892 - 64746 231 284 aa, chain + ## HITS:1 COG:ECs0343 KEGG:ns NR:ns ## COG: ECs0343 COG2207 # Protein_GI_number: 15829597 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 561 98.0 1e-160 MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFT LRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFLTSLPETLFVAPVNHSVEY NWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLG AVIQQMMEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSR EMLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQLAP >gi|296918689|gb|GG773011.1| GENE 60 65273 - 65992 651 239 aa, chain + ## HITS:1 COG:ECs0344 KEGG:ns NR:ns ## COG: ECs0344 COG0247 # Protein_GI_number: 15829598 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 485 99.0 1e-137 MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQPAINSGYIKEAIPGMK NLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAEKVAARMQDLTSFIVNTLG VVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGLELLTFAEQDTCCGFGGTFSV KMAEISGEMVKEKVAHLMEVRPEYLIGADVSCLLNISGRLQREGQKVKVMHIAEVLMSR >gi|296918689|gb|GG773011.1| GENE 61 66003 - 67430 1120 475 aa, chain + ## HITS:1 COG:ykgF KEGG:ns NR:ns ## COG: ykgF COG1139 # Protein_GI_number: 16128292 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Escherichia coli K12 # 1 475 1 475 475 998 99.0 0 MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDELGHWEEWRDRAAQIRD HVLSNLDAYLYQLSEKVTQNGGHVYFAKTKEDATRYILQVAQRKNARKVVKSKSMVTEEI GVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHKDRHQIRRVLHEHLGYEGPET PEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAVMG MERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGRSE VLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVISPLLGGYKDFKDLPY ACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGITAKAEQRAIKMFAYANSHPGLWKVGM MAGAHAASWFINGGKTPLKFGAISDWMEARDLPEADGESFRSWFKKHQAQEKKNG >gi|296918689|gb|GG773011.1| GENE 62 67423 - 68118 476 231 aa, chain + ## HITS:1 COG:ykgG KEGG:ns NR:ns ## COG: ykgG COG1556 # Protein_GI_number: 16128293 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 231 52 282 282 430 97.0 1e-120 MDNRSKFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLTQQQRCDAFIQFASDVMLT RCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNAVVWDPAKGIEN ISQAEQAKVGVVYAEYGLTESGGVVLFSAAGRGRSLSLLPESSLFILRKSTILPRVAQLA EKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLIIEDC >gi|296918689|gb|GG773011.1| GENE 63 68192 - 68389 58 65 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0310 NR:ns ## KEGG: ECS88_0310 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 65 1 65 65 122 100.0 4e-27 MNTNKTLGSNKQHSDRECLYKTIVTVTGKGARLQEWIPVFLTVNILALLMSGYLQKSCIT MTERG >gi|296918689|gb|GG773011.1| GENE 64 68361 - 69029 152 222 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0311 NR:ns ## KEGG: ECS88_0311 # Name: ykgH # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 222 1 222 222 432 100.0 1e-120 MNEQIKQDIDLIEILFYLKKKIRVILFIIAICMVMVLLFLYINKDNIKVTYSLKINQTTP GILVSCDSNNNFACQTTMTEDVIQRITTFFQTSPDVKNREIKLEWSGNKRDLPTAEAEIS RVQASIIKWYASEYHNGRQVLDEIQTPSAINSELYTKMIYLTRNWSLYPNGDGCVTISSP EIKNKYPAAICLALGFFLSIVISVMFCLVKKMVDEYQQNSGQ >gi|296918689|gb|GG773011.1| GENE 65 69238 - 71535 1630 765 aa, chain - ## HITS:1 COG:STM0373_2 KEGG:ns NR:ns ## COG: STM0373_2 COG3468 # Protein_GI_number: 16763753 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Salmonella typhimurium LT2 # 418 765 124 467 467 137 31.0 9e-32 MKNSKAFYRSALATAIVMALSAPAFATDSTVSTDPVTLNTEKTTLDQDVVINGDNKITAV TIETSDSDKDLNVTFGGHDITAASTVNQDFVEGVKVSGNKNVVINATDSTITAQGEGTYV RTAMVIDSTGDVVVNGGNFVAKNEKGSATGISLEATTGNNLTLNGTTINAQGNKSYSNGS TAIFAQKGNLLQGFDGDATDNITLADSNIINGGIETIVTAGNKTGIHTVNLNIKDGSVIG AANNKQTIYASASAQGAGSATQNLNLSVADSTIYSDVLALSESENSASTTTNVNMNVARS YWEGNAYTFNSGDKAGSDLDINLSDSSVWKGKVSGAGDASVSLQNGSVWNVTGSSTVDAL AVKDSTVNITKATVNTGTFASQNGTLIVDASSENTLDISGKASGDLRVYSAGSLDLINEQ TAFISTGKDSTLKATGTTEGGLYQYDLTQGADGNFYFVKNTHKASNASSVIQAMAAAPAN VANLQADTLSARQDAVRLSENDKGGVWIQYFGGKQKHTTAGNASYDLDVNGVMLGGDTRF MTEDGSWLAGVAMSSAKGDMTTMQSKGDTEGYSFHAYLSRQYNNGIFIDTAAQFGHYSNT ADVRLMNGGGTIKADFNTNGFGAMVKGGYTWKDGNGLFIQPYAKLSALTLEGVDYQLNGV DVHSDSYNSVLGEAGTRVGYDFAVGNATVKPYLNLAALNEFSDGNKVRLGDESVNASIDG AAFRVGAGVQADITKNMGAYASLDYTKGDDIENPLQGVVGINVTW >gi|296918689|gb|GG773011.1| GENE 66 71577 - 71900 239 107 aa, chain - ## HITS:1 COG:no KEGG:c0427 NR:ns ## KEGG: c0427 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 107 147 253 253 219 100.0 3e-56 MSERFPEKQKKVLSLLLAGHSWEYSAQFLKTGIRQIWLAEQSLKKRWGIPDSMSLREALL LSSNNFHGDGNALETTNAMTLRENGNTNRYSVVVNAGTQALSLHKYK >gi|296918689|gb|GG773011.1| GENE 67 72355 - 72495 61 46 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227884674|ref|ZP_04002479.1| ## NR: gi|227884674|ref|ZP_04002479.1| hypothetical protein HMPREF0358_1266 [Escherichia coli 83972] conserved domain protein [Escherichia coli MS 185-1] hypothetical protein HMPREF0358_1266 [Escherichia coli 83972] conserved domain protein [Escherichia coli MS 185-1] # 1 46 1 46 46 73 100.0 4e-12 MTQQRCYYHPLRRIRTRYSVGAKIFLLFWAAGLGGTLYSLYSVLAY >gi|296918689|gb|GG773011.1| GENE 68 72492 - 73286 292 264 aa, chain - ## HITS:1 COG:Z0392 KEGG:ns NR:ns ## COG: Z0392 COG2771 # Protein_GI_number: 15800028 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 EDL933 # 107 264 1 158 158 308 97.0 6e-84 MKKPLVIISACQFTRLALESLIPTDRYIVRVYSNVTTEVEFVLKTSCGYLLADIPSLPSG ELVLLACLARLRSDAGQWQVCLTGDSDWFDNAPAASLYNGFPRIGTMLTASRYQNQIIRW LLRPLPGDMSDFWLLTARELSVLKILMQGMSFSEIARYEQRGSKTLHAIATRALMKLGLG TLSDFRLLYTGCGDSRVKRNIRLHAKYIGQHSAHRLTQYVQNMVSGILYPEKVAVGESIN SDAISGKVLSGQRKNISKKRPGLL >gi|296918689|gb|GG773011.1| GENE 69 73616 - 73774 59 52 aa, chain - ## HITS:1 COG:ECs0354 KEGG:ns NR:ns ## COG: ECs0354 COG0582 # Protein_GI_number: 15829608 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 52 1 52 52 102 100.0 2e-22 MLRHACGFALADNGVDTRLLQDYLGHRNIQHTVRYTASNAARFKGVWKKKPR >gi|296918689|gb|GG773011.1| GENE 70 75250 - 76938 1746 562 aa, chain - ## HITS:1 COG:ECs0357 KEGG:ns NR:ns ## COG: ECs0357 COG2303 # Protein_GI_number: 15829611 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Escherichia coli O157:H7 # 1 562 1 562 562 1162 97.0 0 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY NWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLD CLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQ QEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIFFDGKRAVGVEWLEG DSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHL EMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNI QYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQD WQEFRDAIRITREIMHQPALDQYRGREISPGVECQTDEQLDEFVRNHAETAFHPCGTCKM GYDEMAVVDAEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKMADMIRGKDALPRS TARYFVANGMPVRAKKMSRDVN >gi|296918689|gb|GG773011.1| GENE 71 76952 - 78424 1591 490 aa, chain - ## HITS:1 COG:betB KEGG:ns NR:ns ## COG: betB COG1012 # Protein_GI_number: 16128297 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 490 1 490 490 946 98.0 0 MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIW AAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLI PALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEV TPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTDHPGIAKVSFTGGVASGKKVMAN SAASSLKEVTMELGGKSPLIVFDDADLDLAADITMMANFFSSGQVCTNGTRVFVPTKCKA AFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGIEEGARVLCGGDVLKG DSFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIV TADLNLAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQ VEMAKFQSIF >gi|296918689|gb|GG773011.1| GENE 72 78438 - 79025 557 195 aa, chain - ## HITS:1 COG:ECs0359 KEGG:ns NR:ns ## COG: ECs0359 COG1309 # Protein_GI_number: 15829613 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 195 1 195 195 352 98.0 2e-97 MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEAT MRDITSQLRDAVLNRLHALPQGSAELRLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQP MLYRLQQVSSRRLLSNLVSEFRRELPRQQAQEAGYGLAALIDGLWLRAALSGKALDKPLA HSLTRHFITQHLPTD >gi|296918689|gb|GG773011.1| GENE 73 79154 - 81142 2132 662 aa, chain + ## HITS:1 COG:ECs0360 KEGG:ns NR:ns ## COG: ECs0360 COG1292 # Protein_GI_number: 15829614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli O157:H7 # 1 660 1 660 677 1294 99.0 0 MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFGWYYLL AATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQ YMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYP IFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIAL SVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFM GMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFT FTLLWLSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLF YVTSADSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVI MGLPFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGT RYTKQMMETVCYPAMEEVAQELRLRGAYVELKNLPPEEGQQLGHLDLLVHMGEEQNFVYQ IWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNF TS >gi|296918689|gb|GG773011.1| GENE 74 82090 - 83178 825 362 aa, chain + ## HITS:1 COG:yahA_2 KEGG:ns NR:ns ## COG: yahA_2 COG2200 # Protein_GI_number: 16128300 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 101 362 1 262 262 548 99.0 1e-156 MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQK KQLFEKLGIQSDITFWRDIFFQYNPEIISATGNNSHKYINDNHYHHIVTPEAISLALENH EFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGMIPPDQFIPLAESSGLIVIMTRQLMKQT ADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVKKLGNDKIKLVLELTERNPIP VTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGH IVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKA GG >gi|296918689|gb|GG773011.1| GENE 75 83220 - 84152 858 310 aa, chain - ## HITS:1 COG:yahB KEGG:ns NR:ns ## COG: yahB COG0583 # Protein_GI_number: 16128301 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 310 1 310 310 631 99.0 0 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE LTESGRYFFRKATDLLNDFHAIKRSIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG IGFLPDYMVREAMAQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG IYQDLLHREN >gi|296918689|gb|GG773011.1| GENE 76 84244 - 84741 357 165 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0326 NR:ns ## KEGG: ECS88_0326 # Name: yahC # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 165 1 165 165 252 100.0 5e-66 MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIKSLA VNYSGMVWAFFAALAAGWLAPVSGLSAFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLG MTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTKSDGY >gi|296918689|gb|GG773011.1| GENE 77 84999 - 85604 599 201 aa, chain + ## HITS:1 COG:yahD KEGG:ns NR:ns ## COG: yahD COG0666 # Protein_GI_number: 16128303 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli K12 # 1 201 1 201 201 390 98.0 1e-109 MTIKNLPADYLLAAQQGDIDKVKICLALGVDINTCDRQGKTAITLASLYQQYACVQALID AGANINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSI VKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTP LELARERGFEEIAQLLIAAGA >gi|296918689|gb|GG773011.1| GENE 78 85644 - 86507 527 287 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0328 NR:ns ## KEGG: ECS88_0328 # Name: yahE # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 287 1 287 287 592 100.0 1e-168 MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFN GLFRHGDKVQFDDQGITVGQHLHIEMSHCQRWLSPTLQMTALNFHLIAWQQWHDIIHQHL GENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNIAVAVASMMGLGIGLTPSADD YLTGLALILFLPGHPAEKYKEEFYLGLQRGRNNTTLLSAITLEAALQQRCRENIHRFIHN IIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS >gi|296918689|gb|GG773011.1| GENE 79 86497 - 88044 1927 515 aa, chain + ## HITS:1 COG:yahF KEGG:ns NR:ns ## COG: yahF COG0074 # Protein_GI_number: 16128305 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli K12 # 1 515 1 515 515 967 97.0 0 MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELEQA KNGDLMIVINGKSGVDNEQLLAEIEELFNTKAQSGSHEARYATIASAKKHIPESNLAVIS VNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLLMGPDCGTAIINGAA LCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAI GMLENDPQTEIIVLISKPPAPAVARKVLERARACRKPVVACFLGRGETPVDEQGLQFARG SKEAALKAVMLSGVKQEHLDLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETLFAV MEKHGDVYSNIQPDPEFRLQDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRVIEEA RDPEVAVIVMDFVLGFGSHEDPVGSTIEAIKEAKAIAAAEGRELIILAYVLGTDLDTPSL EQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA >gi|296918689|gb|GG773011.1| GENE 80 88044 - 89462 1672 472 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0330 NR:ns ## KEGG: ECS88_0330 # Name: yahG # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 472 1 472 472 948 100.0 0 MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLAD KIASANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPVTWEKMCGAMKGAVTG ALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAY TNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPMLRDAMKIIGEIDLRLMLAQALHMGDE CHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASCDYFSGPTWMAMCKAAMDAAH GIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAIT ETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAID ITRVGSSGILPVINTAIAHKDAGIGMIGAGIVHPPFACFEKAIFGWCERYGV >gi|296918689|gb|GG773011.1| GENE 81 89616 - 90566 1127 316 aa, chain + ## HITS:1 COG:ECs0372 KEGG:ns NR:ns ## COG: ECs0372 COG0549 # Protein_GI_number: 15829626 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 575 99.0 1e-164 MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLD LRRAEIAHEREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDK NDPGFAHPIKPIGAFFSESQRDELQKANPDWRFVEDAGRGYRRVVASPEPKRIVEAPAIK ALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEK VCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIITTPEC LPAALRGETGTHIIKT >gi|296918689|gb|GG773011.1| GENE 82 90576 - 91958 1321 460 aa, chain + ## HITS:1 COG:ECs0373 KEGG:ns NR:ns ## COG: ECs0373 COG0402 # Protein_GI_number: 15829627 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 1 460 1 460 460 912 98.0 0 MKENNSRREFLSQSGKMVTAAALFGPSVPLAHAGVAGTLNCEANNTMKITDPYYYLDNVL LETGFDYENGVAVQTRTARQTVEIQNGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDM HIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTI ARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQL KGKLTISHAFALATLNEQQVDELAHRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTG TDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKA QDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG >gi|296918689|gb|GG773011.1| GENE 83 92256 - 92666 223 136 aa, chain + ## HITS:1 COG:Z0414 KEGG:ns NR:ns ## COG: Z0414 COG4405 # Protein_GI_number: 15800048 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 136 1 136 136 276 98.0 5e-75 MTIKEKISQKYPHASFCTFGDSAALADHLATLIATGVKTASCGSLAGCIEDNAFPMIGEY KIVENSRGEPVCVIRVIGLHLLRFSDVTAELARKEGEGDLSLEYWRNEHRRFFQAEGCYS PEMDVIFEEYALIDVV >gi|296918689|gb|GG773011.1| GENE 84 92920 - 93903 1157 327 aa, chain + ## HITS:1 COG:ECs0374 KEGG:ns NR:ns ## COG: ECs0374 COG1879 # Protein_GI_number: 15829628 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 327 2 328 328 627 99.0 1e-180 MNKRFVINMVSSLLLGAALISAPLQAAEKVVVNISKVDGMPWFNRMGEGVVEAGKAFGVN ASQVGPSSTDAPQQVKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAGIVVLTNESPG QPSANWDIEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKEH YPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKNK VAVYGMMIPSQAASLIKSGDITEGITYDPASAGYALAAVASTLLKGEEIKPGLEMQNLGK ADVDMDKRIIRFHKVLLVNKDNIDSLY >gi|296918689|gb|GG773011.1| GENE 85 93977 - 95461 194 494 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 254 477 8 224 312 79 26 8e-14 METFLSLRHINKTFHATRALRDVSLDFMSGEVHCLAGQNGCGKSTLIKIMSGVYRPDEGA EITLGGKNWSKLTPAASVAQGIQVIYQDLSLFPNLSVWENIAVNHYHHGLFVNRRRLREV AQAAMTSINVTLPLDTLVSELSIARCQLVAICRALAQDARLIVMDEPTASLTHQEVQGLL QVVHQLRERGICVVFVSHRLEEVMEVSDRISVLKDGELVGTFPAAEMTTKQLGFLMTGQE FEYQVRELWQGKSSTPVLEVRNLSRHGEYLNINLRVEAGEVVSIVGLLGAGRTELCLSLF GMTRPDAGEILINGQLVTLHSNQDAIRHGIGYVSEDRMSRGLVMAQSIEDNIISTVFHKV KDRFGFLSEAKVCDLVDRLIKALTIKVSDPHLPVNTLSGGNAQRVSIAKWLAIGPRLLIL DSPTVGVDIANKAGIYGIISDLAAHGIAVLMICDEIEEAWYQSHRILVMQKGQITHSFLP DSSSQARIAEVVNG >gi|296918689|gb|GG773011.1| GENE 86 95454 - 96425 1017 323 aa, chain + ## HITS:1 COG:ECs0377 KEGG:ns NR:ns ## COG: ECs0377 COG1172 # Protein_GI_number: 15829631 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 528 99.0 1e-150 MAELKKRHEFWLALLIVVLFVGLAWRSDEFLTFGNLYDLANNYAMLTILACGLFVVLISG GIDISFPAMTIIAQYGMVLLLQKIGGNFAVAFALAGGIGILLGLINALLVNRLRVPSIII TISTLNIFYGLLLWLSKGVWLYDFPPWFEQGVMLFKYTDADGYDYGLGLPLIAMITVVLL TAFIMNFTSVGRKIYALGGNRESASRIGFSVLKLQLFVYGYMGLMSGAAGVVQSWTVMTV APDSLLGYELTVLAAVVLGGTSLLGGRGTLTGTLLGVVLLAVMQNGLNLLGVSSYWQTLI TGIIIVASISATAWSQHQNRSLL >gi|296918689|gb|GG773011.1| GENE 87 96422 - 97378 818 318 aa, chain + ## HITS:1 COG:ECs0378 KEGG:ns NR:ns ## COG: ECs0378 COG1172 # Protein_GI_number: 15829632 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 490 98.0 1e-138 MKKSWRNNVEFYLIGLLVLTVAAFSITMPEIFWSISNFQSVASQMPVLGILALAMAVTML CGGINLSIIATANACSLVMAWVATQYPPGIATVVATLLAGAGAAVIIGLCNGVLIAGIRV SPILATLGMMTLLKGVNILVTGGSAIANYPSWVLWLNHAQWFGIPLPMWLFTAVALGLWI LLEKTPLGKSIYLIGSNERATLYSGINTRRVLIWVYVISALLCAVAAFLMMSKLNSAKAS YGESYLLVSILAAVLGGVNPDGGSGRIIGMVLALFLLQIIESGFNILGISPYLTMALWGT LLLCFIQARGMLGLDRVV >gi|296918689|gb|GG773011.1| GENE 88 97465 - 98514 983 349 aa, chain + ## HITS:1 COG:yahK KEGG:ns NR:ns ## COG: yahK COG1064 # Protein_GI_number: 16128310 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli K12 # 1 349 1 349 349 678 97.0 0 MKIKAVGAYSAKQPLEPMDITRREPGPHDVKIEIAYCGVCHSDIHQVRSEWAGTVYPCVP GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPD EPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWLAGPGKKVGV VGIGGLGHMGIKLAHAMGAHVVAFTTSESKREAAKALGADEVVNSRNADEMVAHVKSFDF ILNTVAAPHNLDDFTTLLKRDGTITLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPET QEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLTD >gi|296918689|gb|GG773011.1| GENE 89 99398 - 100066 542 222 aa, chain - ## HITS:1 COG:yahN KEGG:ns NR:ns ## COG: yahN COG1280 # Protein_GI_number: 16128313 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli K12 # 1 222 2 223 223 400 99.0 1e-111 MKLLHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVA LGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPIS APWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASIIWRVFLS QAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR >gi|296918689|gb|GG773011.1| GENE 90 100216 - 100491 361 91 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0373 NR:ns ## KEGG: ECUMN_0373 # Name: yahO # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 91 1 91 91 136 100.0 2e-31 MKIISKMLVGALAFAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIK KADEKGADVLVLTSGQTDNKIHGTANIYKKK >gi|296918689|gb|GG773011.1| GENE 91 100592 - 101821 1117 409 aa, chain - ## HITS:1 COG:ECs0384 KEGG:ns NR:ns ## COG: ECs0384 COG1221 # Protein_GI_number: 15829638 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 409 120 528 528 783 98.0 0 MAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSA ATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSS AAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYE EGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPV DVRVISATHCNLEEDMRQGQFRRDLFYRLSILRLQLPPLRERVTDILPLAESFLKVSLAA LSAPFSAALRQGLQASETVLVHYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFLQLLL PELARESAKTPAPRLLTPQQALEKFKGDKTAAANYLGISRTTFWRQLKN >gi|296918689|gb|GG773011.1| GENE 92 101840 - 102178 445 112 aa, chain - ## HITS:1 COG:prpR KEGG:ns NR:ns ## COG: prpR COG1221 # Protein_GI_number: 16128315 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli K12 # 1 112 1 112 528 227 99.0 4e-60 MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLASE RCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTY >gi|296918689|gb|GG773011.1| GENE 93 102417 - 103307 1013 296 aa, chain + ## HITS:1 COG:prpB KEGG:ns NR:ns ## COG: prpB COG2513 # Protein_GI_number: 16128316 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Escherichia coli K12 # 1 296 1 296 296 555 98.0 1e-158 MSLHSPGKAFRAALSKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLG ISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGA KRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEA GAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAF RAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDDLFARNQAK >gi|296918689|gb|GG773011.1| GENE 94 103352 - 103873 485 173 aa, chain + ## HITS:1 COG:prpC KEGG:ns NR:ns ## COG: prpC COG0372 # Protein_GI_number: 16128318 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Escherichia coli K12 # 1 173 1 173 389 334 99.0 6e-92 MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAAHCEFEE VAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCT LPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHF >gi|296918689|gb|GG773011.1| GENE 95 103956 - 104405 485 149 aa, chain + ## HITS:1 COG:ECs0386 KEGG:ns NR:ns ## COG: ECs0386 COG0372 # Protein_GI_number: 15829640 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Escherichia coli O157:H7 # 3 149 243 389 389 309 99.0 9e-85 MWLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSQEGGS LKMYNIADRLETVMWESKKMFPNLDWFSAVSYNMMGVPTEMFTPLFVIARVTGWAAHIIE QRQDNKIIRPSANYVGPEDRQFVALDKRQ >gi|296918689|gb|GG773011.1| GENE 96 104439 - 105890 1599 483 aa, chain + ## HITS:1 COG:ECs0387 KEGG:ns NR:ns ## COG: ECs0387 COG2079 # Protein_GI_number: 15829641 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Escherichia coli O157:H7 # 1 483 1 483 483 1005 98.0 0 MSAQINNIRPEFDREIVDIVDYVMNYEISSRVAYDTAHYCLLDTLGCGLEALEYPACKKL LGPIVPGTVVPNGVRVPGTQFQLDPVQAAFNIGAMIRWLDFNDTWLAAEWGHPSDNLGGI LATADWLSRNAIASGKAPLTMKQVLTGMIKAHEIQGCIALENSFNRVGLDHVLLVKVAST AVVAEMLGLTREEILNAVSLAWVDGQSLRTYRHAPNTGTRKSWAAGDATSRAVRLALMAK TGEMGYPSALTAPVWGFYDVSFKGESFRFQRPYGSYVMENVLFKISFPAEFHSQTAVEAA MTLYEQMQAAGKTAADIEKVTIRTHEACIRIIDKKGPLNNPADRDHCIQYMVAIPLLFGR LTAADYEDNVAQDKRIDALREKINCFEDPAFTADYHDPEKRAIANAITLEFTDGTRFEEV VVEYPIGHARRRQDGIPKLVDKFKINLARQFPTRQQQRILEVSLDRTRLEQMPVNEYLDL YVI >gi|296918689|gb|GG773011.1| GENE 97 105930 - 107816 1996 628 aa, chain + ## HITS:1 COG:ECs0388 KEGG:ns NR:ns ## COG: ECs0388 COG0365 # Protein_GI_number: 15829642 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Escherichia coli O157:H7 # 1 628 1 628 628 1280 99.0 0 MSFSEFYQRSINEPEQFWAEQARRIDWQTPFTQTLDHSNPPFARWFCEGRTNLCHNAIDR WLEKQPEALALIAVSSETEEERTFTFRQLHDEVNAVASMLRSLGVQRGDRVLVYMPMIAE AHITLLACARIGAIHSVVFGGFASHSVAARIDDAKPVLIVSADAGARGGKIIPYKKLLDD AISQAQHQPRHVLLVDRGLAKMARVSGRDVDFASLRHQHIGARVPVAWLESNETSCILYT SGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGGVFFCASDIGWVVGHSYIVYAPLLAG MATIVYEGLPTWPDCGVWWKIVEKYQVSRMFSAPTAIRVLKKFPTAEIRKHDLSSLEVLY LAGEPLDEPTASWVSNTLDVPVIDNYWQTESGWPIMAIARGLDDRPTRLGSPGVPMYGYN VQLLNEVTGEPCGVNEKGMLVVEGPLPPGCIQTIWGDDDRFVKTYWSLFSRPVYATFDWG IRDADGYHFILGRTDDVINVAGHRLGTREIEESISSHPGVAEVAVVGVKDALKGQVAVAF VIPKESDSLEDREVAHLQEKAIMALVDSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQA ICEGRDPGDLTTIDDPASLDQIRQAMEE >gi|296918689|gb|GG773011.1| GENE 98 108141 - 109400 1459 419 aa, chain + ## HITS:1 COG:codB KEGG:ns NR:ns ## COG: codB COG1457 # Protein_GI_number: 16128321 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Escherichia coli K12 # 1 419 1 419 419 671 99.0 0 MSQDNNFSQGPVPQSARKGVLALTFVMLGLTFFSASMWTGGTLGTGLSYHDFFLAVLIGN LLLGIYTSFLGYIGAKTGLTTHLLARFSFGVKGSWLPSLLLGGTQVGWFGVGVAMFSIPV GKATGLDINLLIAVSGLLMTVTVFFGISALTVLSVIAVPAIACLGGYSVWLAVNGMGGLD VLKAVVPAQPLDFNVALALVVGSFISAGTLTADFVRFGRNAKLAVLVAMVAFFLGNSLMF IFGAAGAAALGMADISDVMIAQGLLLPAIVVLGLNIWTTNDNALYASGLGFANITGMSSK TLSVINGIIGTVCALWLYNNFVGWLTFLSAAIPPVGGVIIADYLMNRRRYEHFATTRMMS VNWVAILAVALGIAAGHWLPGIVPVNAVLGGALSYLILNPILNRKTTAAMTHVEANSVE >gi|296918689|gb|GG773011.1| GENE 99 109390 - 110673 1413 427 aa, chain + ## HITS:1 COG:codA KEGG:ns NR:ns ## COG: codA COG0402 # Protein_GI_number: 16128322 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 427 1 427 427 872 98.0 0 MSNNALQTIINAQLPGKEGLWQIHLHDGKISAIDAQSGVMPVTENSLDAEQGLVLPPFVE PHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHV RTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADV VGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHREGMG ARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVK EMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSAR TLNLQDYGIAAGNSANLIILPAENGFDALRRQVPVRYSVRGGKVIASTQPAQTTVYLEQP EAIDYKR >gi|296918689|gb|GG773011.1| GENE 100 110794 - 111405 305 203 aa, chain - ## HITS:1 COG:ECs0395 KEGG:ns NR:ns ## COG: ECs0395 COG0110 # Protein_GI_number: 15829649 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli O157:H7 # 1 203 1 203 203 403 97.0 1e-113 MNMSMTERIKAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEVDKRESLIKEMFATVGE NAWVEPPVYFSYGSNIYIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHE LRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSVVTKDIPPNVVAAGVPCR VIREINDRDKQYYFKDFKVESSV >gi|296918689|gb|GG773011.1| GENE 101 111471 - 112724 1244 417 aa, chain - ## HITS:1 COG:lacY KEGG:ns NR:ns ## COG: lacY COG0477 # Protein_GI_number: 16128328 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 417 1 417 417 686 99.0 0 MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQ PLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNA GAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGIMFTINNQFVFWLGSGCALIL AVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFD QQFANFFTSFFATGEQGTRVLGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMS VRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQL AMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA >gi|296918689|gb|GG773011.1| GENE 102 112776 - 115574 2432 932 aa, chain - ## HITS:1 COG:lacZ KEGG:ns NR:ns ## COG: lacZ COG3250 # Protein_GI_number: 16128329 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 1 932 93 1024 1024 1873 97.0 0 MHGYDAPIYTNVTYPITVNPPFVPAENPTGCYSLTFNIDESWLQEGQTRIIFDGVNSAFH LWCNGRWVGYGQDSRLPSEFDLSAFLHAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRD VSLLHKPTTQISDFQVTTRFNDDFSRAVLEAEVQMYGELRDELRVTVSLWQGETQVASGT APFGGEIIDERGGYADRVTLRLNVENPELWSAEIPNLYRAVVELHTADGTLIEAEACDVG FREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSH YPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHP SVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQP FPAVPKWSIKKWLSLPGEMRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWV DQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRL SGRTIEVTSEYLFRHSDNEFLHWMVALDGKPLASGEVPLDVGPQGKQLIELPELPQPESA GQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPSASHAIPQLTTSGTDFCIEL GNKRWQFNRQSGFLSQMWIGDEKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWK AAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGHGEMVINVDVA VASDTPHPARIGLTCQLAQVSERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVF PSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHM GIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK >gi|296918689|gb|GG773011.1| GENE 103 115538 - 115849 126 103 aa, chain - ## HITS:1 COG:lacZ KEGG:ns NR:ns ## COG: lacZ COG3250 # Protein_GI_number: 16128329 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 1 66 1 66 1024 137 100.0 4e-33 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR FAWFPAGGGGGKAGWSAIFLTPILSSSPQTGRCTVTTRPSTPT >gi|296918689|gb|GG773011.1| GENE 104 115972 - 117063 1004 363 aa, chain - ## HITS:1 COG:lacI KEGG:ns NR:ns ## COG: lacI COG1609 # Protein_GI_number: 16128330 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 4 363 1 360 360 642 98.0 0 MVNVKPVTLYDVAEYAGVSYQTVSRVVNQACHVSAKTREKVEAAMAELNYIPNRVAQQLA GKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQ RVSGLIINYPLDDQDAIAVEAACANVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVAL GHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGI VPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLG QTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLPPNTQTASPRALADSLMQLARQVSRLE SGQ >gi|296918689|gb|GG773011.1| GENE 105 117256 - 117795 590 179 aa, chain + ## HITS:1 COG:yaiL KEGG:ns NR:ns ## COG: yaiL COG3122 # Protein_GI_number: 16128339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 179 40 218 218 295 100.0 4e-80 MAKLTLQEQLLKAGLVTSKKAAKVERTAKKSRVQAREARAAVEENKKAQLERDKQLSEQQ KQAALAKEYKAQVKQLIEMNRITIANGDIGFNFTDGNLIKKIFVDKLTQAQLINGRLAIA RLLVDNNSEGEYAIIPASVADKIAQRDASSIVLHSALSAEEQDEDDPYADFKVPDDLMW >gi|296918689|gb|GG773011.1| GENE 106 118021 - 118854 509 277 aa, chain - ## HITS:1 COG:yaiM KEGG:ns NR:ns ## COG: yaiM COG0627 # Protein_GI_number: 16128340 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli K12 # 1 277 1 277 277 561 97.0 1e-160 MELIEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAENEKLPVLYWLSGLTCNEQNFI TKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDY IRNELPNLVMHHFPATARKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWG QQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR >gi|296918689|gb|GG773011.1| GENE 107 118947 - 120056 1252 369 aa, chain - ## HITS:1 COG:ECs0411 KEGG:ns NR:ns ## COG: ECs0411 COG1062 # Protein_GI_number: 15829665 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Escherichia coli O157:H7 # 1 369 1 369 369 725 99.0 0 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVL GHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPD GTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHN TAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPND YDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRP FQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEG KSIRTVIRY >gi|296918689|gb|GG773011.1| GENE 108 120091 - 120366 286 91 aa, chain - ## HITS:1 COG:ECs0412 KEGG:ns NR:ns ## COG: ECs0412 COG1937 # Protein_GI_number: 15829666 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 91 8 98 98 154 100.0 4e-38 MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLMAEVLESH IRETFDRNDCYSREVSQSVDDTIELVRAYLK >gi|296918689|gb|GG773011.1| GENE 109 120555 - 120947 381 130 aa, chain - ## HITS:1 COG:no KEGG:c0467 NR:ns ## KEGG: c0467 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 130 128 257 257 245 100.0 3e-64 RYTKYYDDVEVDAWQGGISLYTGPVITSYRYTHYDSSDAGGSYSNMISVRLNDPRGTGYT QLWLSRGTGAYTYDWTPETRYGSMKSISLQRIQPLTEQLNLGLTAGKVWYDTPTDDYNGL QLAAHLTWKF Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:08:00 2011 Seq name: gi|296918688|gb|GG773012.1| Escherichia coli MS 110-3 genomic scaffold Scfld212, whole genome shotgun sequence Length of sequence - 1191 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 77 - 136 1.7 1 1 Op 1 . + CDS 258 - 623 331 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 2 1 Op 2 . + CDS 472 - 1182 407 ## COG0110 Acetyltransferase (isoleucine patch superfamily) Predicted protein(s) >gi|296918688|gb|GG773012.1| GENE 1 258 - 623 331 121 aa, chain + ## HITS:1 COG:yaiP KEGG:ns NR:ns ## COG: yaiP COG1215 # Protein_GI_number: 16128348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 121 278 398 398 242 98.0 1e-64 MLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLLVPL APLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEVSTAYSHPSVTGTEKLSE A >gi|296918688|gb|GG773012.1| GENE 2 472 - 1182 407 236 aa, chain + ## HITS:1 COG:b0359 KEGG:ns NR:ns ## COG: b0359 COG0110 # Protein_GI_number: 16128344 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 100 236 11 147 147 266 97.0 4e-71 MPSGLFMDLLPFLLDANLSATNPPAIPHWWKCQPLIPTLLSQELKNYLKLNVKEKNIQIA DQVIIDESAGEVVIGANTRICHGAVIQGPVVIGANCLIGNYAFIRPGTIISNGVRIGFAT EIKNAVIEAEATIGPQCFIADSVVANQAYLGAQVRTSNHRLDEQPVSVRTPDGIIATGCD KLGCYIGQRSRLGVQVIILPGRIISPNTQLGPRVIVERNLPSGTYSLRQELIRTGD Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:08:06 2011 Seq name: gi|296918687|gb|GG773013.1| Escherichia coli MS 110-3 genomic scaffold Scfld214, whole genome shotgun sequence Length of sequence - 22278 bp Number of predicted genes - 21, with homology - 20 Number of transcription units - 12, operones - 5 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 134 - 619 629 ## EcSMS35_4803 antirestriction protein 2 1 Op 2 . - CDS 710 - 1531 727 ## c2526 hypothetical protein - Prom 1590 - 1649 1.8 - Term 1570 - 1608 7.1 3 2 Op 1 . - CDS 1752 - 2162 472 ## ECP_2042 hypothetical protein 4 2 Op 2 . - CDS 2178 - 2660 461 ## UTI89_C2271 hypothetical protein - Prom 2749 - 2808 5.5 - Term 2940 - 2978 4.0 5 3 Op 1 . - CDS 2991 - 4061 599 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily 6 3 Op 2 . - CDS 4058 - 4963 576 ## ECP_2039 hypothetical protein 7 3 Op 3 . - CDS 4960 - 7344 1566 ## COG0699 Predicted GTPases (dynamin-related) - Prom 7439 - 7498 3.2 - Term 7392 - 7423 3.1 8 4 Tu 1 . - CDS 7562 - 7996 450 ## COG3596 Predicted GTPase - Prom 8216 - 8275 5.3 + Prom 8349 - 8408 4.4 9 5 Op 1 4/0.000 + CDS 8518 - 10590 1849 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 10 5 Op 2 33/0.000 + CDS 10601 - 11590 868 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 11 5 Op 3 35/0.000 + CDS 11609 - 12667 920 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 12 5 Op 4 . + CDS 12664 - 13302 188 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 13 5 Op 5 . + CDS 13356 - 13613 254 ## UTI89_C2262 hypothetical protein 14 6 Tu 1 . - CDS 14144 - 15316 424 ## UTI89_C2261 hypothetical protein + Prom 15897 - 15956 2.8 15 7 Tu 1 . + CDS 16024 - 16116 80 ## + Prom 16574 - 16633 2.0 16 8 Op 1 9/0.000 + CDS 16813 - 17835 575 ## COG4584 Transposase and inactivated derivatives 17 8 Op 2 . + CDS 17835 - 18614 617 ## COG1484 DNA replication protein 18 9 Tu 1 . - CDS 18951 - 19166 72 ## UTI89_C2256 hypothetical protein - Prom 19354 - 19413 3.2 19 10 Tu 1 . - CDS 19640 - 20242 555 ## UTI89_C2255 hypothetical protein - Prom 20415 - 20474 4.2 - Term 20438 - 20466 0.5 20 11 Tu 1 . - CDS 20517 - 20723 298 ## COG3311 Predicted transcriptional regulator + Prom 21353 - 21412 1.5 21 12 Tu 1 . + CDS 21506 - 21646 57 ## ECP_2998 haemolysin expression modulating protein; region: HHA; cl11501 + Term 21844 - 21884 -1.0 Predicted protein(s) >gi|296918687|gb|GG773013.1| GENE 1 134 - 619 629 161 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_4803 NR:ns ## KEGG: EcSMS35_4803 # Name: not_defined # Def: antirestriction protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 161 1 161 161 324 96.0 8e-88 MTTSSHNSTTPSVSVAAASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGW MDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAAC LMTYSHHACRTECYAMTVHYYRLRDYALQHPEYDAIMRIID >gi|296918687|gb|GG773013.1| GENE 2 710 - 1531 727 273 aa, chain - ## HITS:1 COG:no KEGG:c2526 NR:ns ## KEGG: c2526 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 273 1 273 273 524 100.0 1e-147 MRLASRFGYAANQIRRDRPLTHEELMHHVPGIFGEEKHTSRSQNYTYIPTITVLENLQRE GFQPFFACQTRVRDQSRREYTKHMLRLRRAGQITGQHVPEIILLNSHDGSSSYQMLPGYF RAICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFDLIEEKRDAMQSLVLPPPAR QALAQAALTYRYGDEHQPVTTTDILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARG KRIHTRAIHSIDTDIKLNRALWVMAETLLESLR >gi|296918687|gb|GG773013.1| GENE 3 1752 - 2162 472 136 aa, chain - ## HITS:1 COG:no KEGG:ECP_2042 NR:ns ## KEGG: ECP_2042 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 136 1 136 136 259 100.0 2e-68 MKTFIKTLLVAVTILFSVFATAKQVKLPNNIKYVNTTEAFSCTEIDGMNCQTKNPFNYKD NSYVFVLERGGAWCYDYTVSVLNLKTGKAQMLEYKDNQLCSGSNKPFFEIKNGVPTVGVI DTSGKPVVVALDKLKT >gi|296918687|gb|GG773013.1| GENE 4 2178 - 2660 461 160 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2271 NR:ns ## KEGG: UTI89_C2271 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 160 102 261 261 333 99.0 1e-90 MKRLHTLMLFLAVLFTGFNVEAASVKQALSCDPNARAEQPGACPTTYELYEGDAAYKAAL DKALKPVGLSGMFGKGGYMDGPGGNVTPVTINGTVWLQGDSCKANTCGWDFIVTLYNPKT HEVVGYRYFGLDDPAYLVWFGEIGVHEFAYLVKNYVAAVN >gi|296918687|gb|GG773013.1| GENE 5 2991 - 4061 599 356 aa, chain - ## HITS:1 COG:ECs1399 KEGG:ns NR:ns ## COG: ECs1399 COG1752 # Protein_GI_number: 15830653 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Escherichia coli O157:H7 # 1 356 1 356 356 660 96.0 0 MSTEMKTGLVLSGGGAVGAYQAGVVKALAECGTQISMVSGASIGAFNGAIIAASPDLSEA AVRLEALWDHLGNNQVLSVNRLVYFSLLKKLFQAMNLCQIPGRAGALLTTLLRHISILNG FDNLMAQPLLSDEPLTALLDHYLDTDALADGLPLYVSLYPTEGGMQDIIDCIRAELGAGT TKNAVFQHIQSLPRGQQKEALLASAALPLLFRPREVQGTMFGDGGMGGWRNMQGNTPVTP LVDAGCNMVIVTHLSDGSLWDRQAFPDTTILEIRPRKRLKYAGDGDNSGGLLSFTLAHTD AWRQQGYEDTMLTMEHIRKPLAARQVLSRSETVLQKSLEITEEADLALRNAMARIK >gi|296918687|gb|GG773013.1| GENE 6 4058 - 4963 576 301 aa, chain - ## HITS:1 COG:no KEGG:ECP_2039 NR:ns ## KEGG: ECP_2039 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 301 1 301 301 585 100.0 1e-165 MTSPFIQQIADNRVCQVLTCLPEKFVVDFANGIDVAQEHIRTAGERTFFRRLKEGLTGEG AARQNAINASVAQGLEASLRWLTELTTSLATTNYAITRVNDRVSSLVSDTARLAHYSADT REQLLILADQVHHKLNHLEEKLHRVDQVQRAQLHLEQIFSWWSAGRYASFSPAGRCYVAL EELRWGAFGDVIRQGETGQVNQLLDILRHKALTQMAQESGGSATVRLNTLDWLGGQGREQ ADNEWHDAINWLGDWCSEEQHPVIWSTTQAAEHLPVRMPRLCSAERLSESMVDEIFQKGA A >gi|296918687|gb|GG773013.1| GENE 7 4960 - 7344 1566 794 aa, chain - ## HITS:1 COG:Z1212_1 KEGG:ns NR:ns ## COG: Z1212_1 COG0699 # Protein_GI_number: 15800733 # Func_class: R General function prediction only # Function: Predicted GTPases (dynamin-related) # Organism: Escherichia coli O157:H7 EDL933 # 1 274 2 275 275 507 96.0 1e-143 MHEKNIALLCDEADRLLQLNINLLRQMVEEPDVLSDSKNENRLLFDKQKALKRIEELEGE QIKTARREMVLAVVGTMKAGKSTTINAIVGQEILPNRNRPMTSVPTLIRHVPGKTEPVLH LEHIQPVRNLLITLQEKLATPAGQQVAQTLQQTGDTRELLDILTDDGWLKNEYHGEEEIF TGLASLNDLVRLAAAMGTEFPFDEYAEVQKLPVIDVEFSHLVGMDACQGTLTLLDTPGPN EAGQPQMEVMMRDQLQKASAVLAVMDYTQMNSKADEDVRKELNAIADVSAGRLFVLVNKF DEKDRNGDGADAVRQKVPAMLNSDVLPASRVYPGSSRQAYLANRALHELRKNGTLPVDEA WVDDFVREAFGRMKKDYVCKDSELATEGATDLWECSLIDQLITEVILSSHSRAAALAVDS AAAKLMQNAENISEYLSLRHQGLMQSIQSLQAHITSLLEDIREIADCQEQVTADVRMAME EIDARTRELLTGVCTSLEEELNDYFRSGKRKEQQMLEEENSAQPRERNAFAFFHDIFGTG NQHDRMRDFDPDSPEIKFSDRREALELMTQIESTVTSLHREAEAQFRPELEKIVSGIETG FRGTALYATENIAGRINTRLEDEGFTVKISFPAVSQLQTRLAVKTNLSALMEERTETVTR RRRQSGLWGKICGAFGTSDWGWETYKEDVSRSVININTVRKEVMSLTRAYFGELQASIEQ DINQPVRQEIDAFFCAFREKVEQLRNTLIQSSEDHKRDQQAQERLTRRLQALNERVPELI TDSKALREELETML >gi|296918687|gb|GG773013.1| GENE 8 7562 - 7996 450 144 aa, chain - ## HITS:1 COG:yeeP KEGG:ns NR:ns ## COG: yeeP COG3596 # Protein_GI_number: 16129940 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 62 144 154 236 236 145 90.0 2e-35 MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGE VTPVSALMTVLPGHAAIHLMTRLQDELRTESVRTQTREQFTGAVDRIFDTAESVCIASVA RTVLRAVRDSVVSVARAVWNWIFF >gi|296918687|gb|GG773013.1| GENE 9 8518 - 10590 1849 690 aa, chain + ## HITS:1 COG:PA1910 KEGG:ns NR:ns ## COG: PA1910 COG1629 # Protein_GI_number: 15597106 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 1 690 128 804 804 227 28.0 8e-59 MIVTGNTAADTTDSAAGAGFKTNDIDVGPLGTKSWIETPYSSTTVTKEMIENQQAQSVSE MLKYSPSTQMQARGGMDVGRPQSRGMQGCVVANSRLDGLNIVSTTAFPVEMLERMDVLNS LTGALYGPASPAGQFNFVAKRPTEETLRKVTLGYQSRSAFTGHADLGGHFDENKRFGYRV NLLDQEGEGNVDDSTLRRKLVSVALDWNIQPGTQLQLDASHYEFIQKGYVGSFNYGPNVK LPSAPNPKDKNLALSTAGNDLTTDTISTRLIHYFNDDWSMNAGVGWQQADRAMRSVSSKI LNNQGDISRSMKDSTAAGRFRVLSNTAGLNGHIDTGSIGHDLSLSTTGYVWSLYSAKGTG SSYSWGTTNMYHPDAIDEQGDGKIRTGGPRYRSSVNTQQSVTLGDTVTFTPQWSAMFYLS QSWLQTKNYDKHGNQTNQVDENGLSPNAALMYKITPNTMAYVSYADSLEQGGTAPTDESV KNAGQTLNPYRSKQYEVGLKSDIGEMNLGAALFRLERPFAYLDTDNVYKEQGNQVNNGLE LTAAGNVWQGLNIYSGVTFLDPKLKDTANASTSNKQVVGVPKVQANLLAEYSLPSIPEWV YSANVHYTGKRAANDTNTSYASSYTTWDLGTRYTTKVSNVPTTFRVVVNNVFDKHYWASI FPSGTDGDNGSPSAFIGGGREVRASVTFDF >gi|296918687|gb|GG773013.1| GENE 10 10601 - 11590 868 329 aa, chain + ## HITS:1 COG:CAC1988 KEGG:ns NR:ns ## COG: CAC1988 COG0614 # Protein_GI_number: 15895258 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Clostridium acetobutylicum # 28 325 58 348 355 176 31.0 6e-44 MKLSRLFPLLALLLAASLHAENTHKEVRIASPWPAQNTIIAMLGYGDNIVGTSMIAKRIP LFRQSLPRIEKVAAVSVNSGHEINPEQIIALGVDMLFVPQNMVVPQQALLKQAGVQVLAF EANSLRALTQRVQQTAAVLGPDAQQKALAYQRYFDRNVALVTGRLKDLPASQRVSLYHSM GNPLTTTGRPSLNQDWIDLAGGKNIAENWFGEHQQNRSGEVALEKIVTANPAVIIAMNKR DADAILSSPQWASVDAVIHHRVYVNPKGMFWWCRETSEEALQFLWLAKTLYPARFADVDI RKETREFYRQFFGLTLSDAQMSDVLNPPR >gi|296918687|gb|GG773013.1| GENE 11 11609 - 12667 920 352 aa, chain + ## HITS:1 COG:STM0770 KEGG:ns NR:ns ## COG: STM0770 COG0609 # Protein_GI_number: 16764134 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Salmonella typhimurium LT2 # 13 351 21 359 359 408 79.0 1e-114 MTVLESTLSVENRYRQLFRQRLVILAVIFIAIIASLLLDFTLGPSGLPLHSLIKTLMHPS GATNGMRVIVWDIRLPYALMALLVGMALGLAGAEMQTILNNSLASPFTLGVSSAAAFGAA LAIVLGIGIPGVPESGFIPANAFLFALLSALLLDSLTRWTRVPTSGVVLFGIALVFTFNA LVSIMQFVADEDTLQGLVFWTMGSLARASWEKLAVLAAAMAIVLPWSLRRAWQLTALRLG EERAMSFGIDVRRLRLGSLLRISLLAALSVAFVGPIGFIGLVAPHISRLLLGEDHRFYLP GSILIGGLVLSLASVASKNIIPGVILPVGIVTSLVGVPFFLSIVMRHRGSMS >gi|296918687|gb|GG773013.1| GENE 12 12664 - 13302 188 212 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 178 46 226 245 77 27 1e-13 MSGLTINALCAGYGKRRIIEHLSISTLPFARRAEKVVFLPQSLPQGVHLQVLESVVVAQR ASGAGQNQAQAIALLEELGIAHLAMNYLDSLSGGQKQLVGLAQSLIRRPALLLLDEPLSA LDLNYQFHVMDVVSRETRRRNMVTLVVLHDINIALRHAAQVIMLKEGKLIDSGDPQTVIH AESLAQVYGVRGRVERCAQGRSMVIVDGAIEK >gi|296918687|gb|GG773013.1| GENE 13 13356 - 13613 254 85 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C2262 NR:ns ## KEGG: UTI89_C2262 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 85 1 85 85 156 100.0 3e-37 MQHIDRLNVIKALVLLEDEQIVRFNIAANDNASQIHMLVDGLGVGLTHEPVAAGMISHRT ACHRSRQHDRPAHSYFYYLSAYQVA >gi|296918687|gb|GG773013.1| GENE 14 14144 - 15316 424 390 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2261 NR:ns ## KEGG: UTI89_C2261 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 390 1 390 390 775 100.0 0 MWEEQVRCIVGKELDDICTSCPYIDAIKRHKQQLGAIEEYTQWLKKEPRASYFFLFRLYT RIHNTFFPKKQQLPFTPGGTHCPEPDVTLRDLTLSPGYHSDYAPQPIPEMDSSAVVPPTN ENTSPPEDTPDNTPAGGNTGQAEKTRNSGLTPIPEKRSGMPPEHLRFATGFPPQPKIAGP KGKPMRTVHPDKIYREIIWFCSGYLRKSGPEATRTIINSIFCEWASIFNDYSSPFSWVDS RDSEQCDWLWNAMQVRCVGTPLNPLTPEQKYWFACATFDNWEGWNEQQVQFLLESNPRRN RAKFTQASFQAPRIQHKAILLDELKSAREQQKRRDERADGSVPLKLSGKIHKQLESIARS RGVLPKKLLNEMIEQAYQDFVANEQHKTLS >gi|296918687|gb|GG773013.1| GENE 15 16024 - 16116 80 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSEPDLLSEVHPVADLCSHFRDPEPTTPYG >gi|296918687|gb|GG773013.1| GENE 16 16813 - 17835 575 340 aa, chain + ## HITS:1 COG:YPO1900 KEGG:ns NR:ns ## COG: YPO1900 COG4584 # Protein_GI_number: 16122147 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 340 1 340 340 678 99.0 0 MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEY RDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRGFIRSLSVPQEQEPAVRFETEP GRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPR EVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML ALPPEKKEYDVHPSENLVNFDKHPLHHPLSIYDSFCRGVA >gi|296918687|gb|GG773013.1| GENE 17 17835 - 18614 617 259 aa, chain + ## HITS:1 COG:YPO1901 KEGG:ns NR:ns ## COG: YPO1901 COG1484 # Protein_GI_number: 16122148 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Yersinia pestis # 1 259 2 260 260 469 99.0 1e-132 MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQA MYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAI AMGYEAVRAGIKVRFTTAADLLLQLSTEQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQ EEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGE SYRLRQKRKAGVIAEANPE >gi|296918687|gb|GG773013.1| GENE 18 18951 - 19166 72 71 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2256 NR:ns ## KEGG: UTI89_C2256 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 71 16 86 86 121 100.0 8e-27 MAWNTDVSADGKPHSLWKQGRALASQPESVTKTNIAENRIHRSGVNARRQKPLSAQPPSD LNKKHTHNRLT >gi|296918687|gb|GG773013.1| GENE 19 19640 - 20242 555 200 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2255 NR:ns ## KEGG: UTI89_C2255 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 200 3 202 202 403 99.0 1e-111 MKQQYQTRYELLHESYQKWLTGFTRHAVSWGVCHPNIYYFHNLTPGWVSFNGEKPEIAIV PQSLHRLIYGPDKRSSPSLDDDLVVNLCTSEHLLIHHPMLEGILLSECERLKQHSLANKL ISLFRQFGGTELRLKLVWLCWLDLMTGNSLDDWTKNLKHKSEKDLEQWIIARQGQSEPLT NLMDQYVLMAYRTSVDAAHS >gi|296918687|gb|GG773013.1| GENE 20 20517 - 20723 298 68 aa, chain - ## HITS:1 COG:Z1188 KEGG:ns NR:ns ## COG: Z1188 COG3311 # Protein_GI_number: 15800709 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 9 58 15 64 65 77 66.0 8e-15 MTTPVSLMDDQMVDMAFITQLNGLTDKWFYRLIRDGAFPAPIKLGRSSRWLKSEVEAWLQ ARIAQSRP >gi|296918687|gb|GG773013.1| GENE 21 21506 - 21646 57 46 aa, chain + ## HITS:1 COG:no KEGG:ECP_2998 NR:ns ## KEGG: ECP_2998 # Name: not_defined # Def: haemolysin expression modulating protein; region: HHA; cl11501 # Organism: E.coli_536 # Pathway: not_defined # 1 46 83 128 128 89 93.0 6e-17 MISHTRYKLTPAELEAFNSAVDNRLAELTMNKLYDRVPASVWKYVT Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:08:46 2011 Seq name: gi|296918686|gb|GG773014.1| Escherichia coli MS 110-3 genomic scaffold Scfld221, whole genome shotgun sequence Length of sequence - 3050 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 10 - 69 4.0 1 1 Tu 1 . + CDS 103 - 303 84 ## ECO103_3574 hypothetical protein + Prom 1403 - 1462 1.6 2 2 Tu 1 . + CDS 1483 - 2679 469 ## COG3547 Transposase and inactivated derivatives + Prom 2729 - 2788 2.1 3 3 Tu 1 . + CDS 2875 - 3049 195 ## COG3311 Predicted transcriptional regulator Predicted protein(s) >gi|296918686|gb|GG773014.1| GENE 1 103 - 303 84 66 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3574 NR:ns ## KEGG: ECO103_3574 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 63 1 63 64 86 85.0 4e-16 MVIRKKKCRDCGNAITHNTVCCPYCGSVDPFGYYRNTDRIVTILLALIIVVLLTTVSVSV YILCSW >gi|296918686|gb|GG773014.1| GENE 2 1483 - 2679 469 398 aa, chain + ## HITS:1 COG:Cgl1010 KEGG:ns NR:ns ## COG: Cgl1010 COG3547 # Protein_GI_number: 19552260 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 14 393 7 390 402 251 41.0 1e-66 MTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDENKLRSLISDLKQHGQI LLVVDQPATIGALPVAVARSEGVLVGYLPGLAMRRIADLHAGEAKTDARDAAIIAEAART LPHALRTLKLADEQIAELSMLCGFDDDLAAQTTQASNRIRGLLTQIHPALERVLGPRLDH PAVLDLLQRYPSPEKLASLGEKKLAAQLCKLAPRLGKRLAADIAQALAEQTVVVPGTNAA AVVLPRLALQLITLRKQRDEVALAVEQRVLAHPLYPVLTSMPGVGVRTAARLLTEVACRA FASVAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKALKRALFLSAFAALRDPLSRAYYTR KMSQGKRHNQALIALARRRCDVLFAMMRDGTFYTPQAS >gi|296918686|gb|GG773014.1| GENE 3 2875 - 3049 195 58 aa, chain + ## HITS:1 COG:Z1188 KEGG:ns NR:ns ## COG: Z1188 COG3311 # Protein_GI_number: 15800709 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 9 58 15 64 65 75 68.0 2e-14 MATPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKVGGFPAPIKMGRSSRWLKSEVEAW Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:08:48 2011 Seq name: gi|296918685|gb|GG773015.1| Escherichia coli MS 110-3 genomic scaffold Scfld225, whole genome shotgun sequence Length of sequence - 630 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 187 - 246 2.0 1 1 Tu 1 . + CDS 308 - 629 81 ## EC55989_4973 hypothetical protein Predicted protein(s) >gi|296918685|gb|GG773015.1| GENE 1 308 - 629 81 107 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4973 NR:ns ## KEGG: EC55989_4973 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 107 30 136 173 226 100.0 3e-58 MRILNCYMANDSKGHFVTAKEAAKHNRQDVLCCVSCGCPLTLQRGNDGQPPWFEHDQMTV AEKILLRCTWLDPAEKEARRLHLQGMTVPDYTVKVRKWFCVMCDEDY Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:08:51 2011 Seq name: gi|296918684|gb|GG773016.1| Escherichia coli MS 110-3 genomic scaffold Scfld228, whole genome shotgun sequence Length of sequence - 1472 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 82 - 567 545 ## ECS88_3311 antirestriction protein (KlcA-like) 2 1 Op 2 . - CDS 658 - 1404 519 ## ECS88_3309 hypothetical protein Predicted protein(s) >gi|296918684|gb|GG773016.1| GENE 1 82 - 567 545 161 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3311 NR:ns ## KEGG: ECS88_3311 # Name: not_defined # Def: antirestriction protein (KlcA-like) # Organism: E.coli_S88 # Pathway: not_defined # 1 161 1 161 161 313 99.0 2e-84 MKTVSQNTCTLSASVVTASENDQPQLVATLVPHEQRISFWPQHFGLIPQWVTLEPRVFGW MDHLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAAC LMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID >gi|296918684|gb|GG773016.1| GENE 2 658 - 1404 519 248 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3309 NR:ns ## KEGG: ECS88_3309 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 248 25 272 272 488 99.0 1e-137 MQVVPSVFGEDKHTSRSENYTWIPTITVLESLQREGFQPFFACQTRVRDPGRRGYTKHML RLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNV VEKVIEGAYEVVGVFDRIEEKRDAMQSLVLPPPTRQALAQAALTYRYGDEHQPVTTADIL TPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGKRIHTRAIHSIDTDIKLNRALWVMT ETLLENMR Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:09:00 2011 Seq name: gi|296918683|gb|GG773017.1| Escherichia coli MS 110-3 genomic scaffold Scfld234, whole genome shotgun sequence Length of sequence - 3059 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 217 - 276 4.5 1 1 Op 1 25/0.000 + CDS 318 - 1484 589 ## COG1192 ATPases involved in chromosome partitioning 2 1 Op 2 . + CDS 1484 - 2455 354 ## COG1475 Predicted transcriptional regulators + Term 2542 - 2581 3.0 Predicted protein(s) >gi|296918683|gb|GG773017.1| GENE 1 318 - 1484 589 388 aa, chain + ## HITS:1 COG:YPCD1.13c KEGG:ns NR:ns ## COG: YPCD1.13c COG1192 # Protein_GI_number: 16082703 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Yersinia pestis # 1 386 1 386 388 580 69.0 1e-165 MRLMETLNQCINAGHEMTKAIAIAQFNDDSPEARKITRRWRIGEAADLVGVSSQAIRDAE KAGRLPHPDMEIRGRVEQRVGYTIEQINHMRDVFGTRLRRAEDVFPPVIGVAAHKGGVYK TSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLHIHAEDTLLPFYLGEKDDVT YAIKPTCWPGLDIIPSCLALHRIETELMGKFDEGKLPTDPHLMLRLAIETVAHDYDVIVI DSAPNLGIGTINVVCAADVLIVPTPAELFDYTSALQFFDMLRDLLKNVDLKGFEPDVRIL LTKYSNSNGSQSPWMEEQIRDAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTG AWRNALSIWEPVCNEIFDRLIKPRWEIR >gi|296918683|gb|GG773017.1| GENE 2 1484 - 2455 354 323 aa, chain + ## HITS:1 COG:YPCD1.12c KEGG:ns NR:ns ## COG: YPCD1.12c COG1475 # Protein_GI_number: 16082702 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 1 320 1 316 320 266 48.0 3e-71 MKRAPVIPKHTIKTQPLEDTPSSAPAAPMVDSLIARVGAMARGNAITLPVCGRDVKFTLE VLRGDSVEKTSRVWSGNERDQELLTEDALDDLIPSFLLTGQQTPAFGRRVSGVIEIADGS RRRKAAALTESDYRVLVGELDDEQMAALSRLGNDYRPTSAYERGQRYASRLQNEFAGNIS ALADAENISRKIITRCINTAKLPKSVVALFSHPGELSARSGDALQRAFTDKEELLKQQAS NLHEQKKAGVIFEAEEVITLLTSVLKTSSASRTSLSSRHQFAPGATVLYKGDKMVLNLDR SRIPTECIERIEAILKELEKAAL Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:09:01 2011 Seq name: gi|296918682|gb|GG773018.1| Escherichia coli MS 110-3 genomic scaffold Scfld250, whole genome shotgun sequence Length of sequence - 3474 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 4, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 4 - 63 5.7 1 1 Tu 1 . + CDS 89 - 283 116 ## EcSMS35_A0079 hypothetical protein 2 2 Tu 1 . - CDS 359 - 838 238 ## pECS88_0028 hypothetical protein - Prom 1065 - 1124 2.8 + Prom 676 - 735 6.9 3 3 Tu 1 . + CDS 956 - 1405 161 ## pECS88_0029 hypothetical protein + Term 1455 - 1503 6.2 + Prom 3010 - 3069 5.0 4 4 Tu 1 . + CDS 3225 - 3446 108 ## EcSMS35_A0076 hypothetical protein Predicted protein(s) >gi|296918682|gb|GG773018.1| GENE 1 89 - 283 116 64 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0079 NR:ns ## KEGG: EcSMS35_A0079 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 64 1 64 64 105 100.0 5e-22 MNVKNMFYGAILVSAVWAVILLSWFESSLTLSDYLRYESVILIPCLLWVAVYGLGKRYLQ RTSN >gi|296918682|gb|GG773018.1| GENE 2 359 - 838 238 159 aa, chain - ## HITS:1 COG:no KEGG:pECS88_0028 NR:ns ## KEGG: pECS88_0028 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 159 1 159 159 301 99.0 7e-81 MATEWVDVADNAVKIGLGSLLTILGGWLTLKLTQKHELKKEAAVQGLKDKEIKTKRYVEF LVLSQSLMQKYLYEQCEANNDDYLAYLRIHNEITITSGLAIRKAAFKLQFDVSTFIFYNK IHDTELINALRDKARNSVSMFQAIVNEEICNGKFGTASQ >gi|296918682|gb|GG773018.1| GENE 3 956 - 1405 161 149 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0029 NR:ns ## KEGG: pECS88_0029 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 149 1 149 149 265 100.0 3e-70 MVKFPGEVMSSSAAVTVITGVLVFVGGQLIVKSAIEPYIEFKKQLGKISNLLLANQAKLA NPCAVEMSEIIHELKDAAAQLMSKHSALPFYIKKFHIGFRFVPSTPEIISSAQKLNLIAS IHEGKSKESTYEHIAEIGRMLKIPTTYSL >gi|296918682|gb|GG773018.1| GENE 4 3225 - 3446 108 73 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0076 NR:ns ## KEGG: EcSMS35_A0076 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 72 405 476 500 146 100.0 2e-34 MMILELSGKEFFSHVGDIALQVESKYNIYLPYLCGRHATENEHEAYNNMYEHFMVKELSP EQSDLIIQITDMG Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:09:45 2011 Seq name: gi|296918681|gb|GG773019.1| Escherichia coli MS 110-3 genomic scaffold Scfld273, whole genome shotgun sequence Length of sequence - 107687 bp Number of predicted genes - 97, with homology - 95 Number of transcription units - 52, operones - 20 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 5/0.333 - CDS 66 - 665 575 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 2 1 Op 2 7/0.042 - CDS 662 - 3208 2667 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 3 1 Op 3 . - CDS 3208 - 4380 999 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit - Prom 4408 - 4467 4.8 + Prom 4345 - 4404 4.9 4 2 Tu 1 . + CDS 4510 - 5202 828 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 5233 - 5275 1.3 5 3 Tu 1 . - CDS 5175 - 6167 685 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 6195 - 6254 2.9 + Prom 6182 - 6241 3.9 6 4 Op 1 1/1.000 + CDS 6316 - 9018 2418 ## COG0642 Signal transduction histidine kinase 7 4 Op 2 . + CDS 9101 - 10174 585 ## COG0348 Polyferredoxin + Term 10204 - 10247 -0.5 - Term 10175 - 10216 5.6 8 5 Tu 1 . - CDS 10223 - 10396 264 ## ECS88_1006 regulator of phosphatidylethanolamine synthesis - Prom 10518 - 10577 4.2 - Term 10555 - 10585 1.0 9 6 Tu 1 . - CDS 10790 - 11002 298 ## COG1278 Cold shock proteins - Prom 11191 - 11250 6.0 + Prom 11172 - 11231 6.8 10 7 Tu 1 . + CDS 11288 - 11500 168 ## COG1278 Cold shock proteins + Term 11509 - 11538 0.4 - Term 11323 - 11360 1.2 11 8 Op 1 . - CDS 11488 - 12798 710 ## APECO1_84 phosphoanhydride phosphorylase 12 8 Op 2 . - CDS 12878 - 12970 57 ## 13 8 Op 3 31/0.000 - CDS 12983 - 14119 1130 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 14 8 Op 4 . - CDS 14131 - 15675 1575 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 - Prom 15708 - 15767 2.2 15 9 Op 1 . - CDS 15809 - 16666 725 ## APECO1_81 hydrogenase-1 operon protein HyaF 16 9 Op 2 . - CDS 16663 - 17061 448 ## ECS88_0998 hydrogenase-1 operon protein HyaE 17 9 Op 3 7/0.042 - CDS 17058 - 17645 688 ## COG0680 Ni,Fe-hydrogenase maturation factor 18 9 Op 4 . - CDS 17642 - 18148 504 ## COG1969 Ni,Fe-hydrogenase I cytochrome b subunit 19 9 Op 5 8/0.042 - CDS 18166 - 18375 179 ## COG1969 Ni,Fe-hydrogenase I cytochrome b subunit 20 9 Op 6 11/0.000 - CDS 18394 - 20187 1854 ## COG0374 Ni,Fe-hydrogenase I large subunit 21 9 Op 7 . - CDS 20184 - 21302 824 ## COG1740 Ni,Fe-hydrogenase I small subunit - Prom 21458 - 21517 2.7 + TRNA 21729 - 21816 76.9 # Ser TGA 0 0 + Prom 21741 - 21800 80.4 22 10 Op 1 2/0.917 + CDS 22023 - 22682 759 ## COG0670 Integral membrane protein, interacts with FtsH + Term 22704 - 22738 3.4 + Prom 22690 - 22749 4.7 23 10 Op 2 . + CDS 22774 - 23103 510 ## COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit - Term 22996 - 23039 1.6 24 11 Tu 1 . - CDS 23100 - 23378 352 ## COG1254 Acylphosphatases - Prom 23462 - 23521 2.4 + Prom 23344 - 23403 2.1 25 12 Op 1 3/0.833 + CDS 23473 - 24663 578 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative 26 12 Op 2 . + CDS 24721 - 25038 420 ## COG3785 Uncharacterized conserved protein + Term 25043 - 25097 14.3 - Term 25038 - 25077 8.1 27 13 Tu 1 . - CDS 25083 - 25496 608 ## COG1832 Predicted CoA-binding protein - Prom 25616 - 25675 4.6 28 14 Op 1 . + CDS 25471 - 25629 80 ## EcSMS35_2154 hypothetical protein 29 14 Op 2 3/0.833 + CDS 25669 - 26331 618 ## COG3110 Uncharacterized protein conserved in bacteria + Term 26341 - 26367 -1.0 30 14 Op 3 . + CDS 26418 - 26885 426 ## COG1803 Methylglyoxal synthase + Term 26893 - 26924 4.1 - Term 26755 - 26793 4.1 31 15 Tu 1 . - CDS 26917 - 28989 1612 ## COG0210 Superfamily I DNA and RNA helicases - Prom 29038 - 29097 4.7 + Prom 29002 - 29061 3.6 32 16 Op 1 5/0.333 + CDS 29094 - 29540 490 ## COG3304 Predicted membrane protein 33 16 Op 2 . + CDS 29550 - 31712 1828 ## COG1289 Predicted membrane protein + Term 31728 - 31776 3.9 34 17 Tu 1 . - CDS 31675 - 32304 547 ## COG3070 Regulator of competence-specific genes - Prom 32336 - 32395 6.0 + Prom 32277 - 32336 8.4 35 18 Tu 1 . + CDS 32523 - 33032 281 ## COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation + Term 33103 - 33146 3.1 + Prom 33177 - 33236 12.2 36 19 Tu 1 . + CDS 33388 - 34428 1164 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Term 34443 - 34488 13.7 - Term 34437 - 34469 6.1 37 20 Tu 1 . - CDS 34566 - 35018 449 ## COG3120 Uncharacterized protein conserved in bacteria - Prom 35044 - 35103 4.0 + Prom 35117 - 35176 3.7 38 21 Op 1 8/0.042 + CDS 35204 - 36964 1380 ## COG1067 Predicted ATP-dependent protease 39 21 Op 2 . + CDS 37033 - 37551 707 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases + Term 37579 - 37614 4.5 - Term 37566 - 37603 9.1 40 22 Tu 1 . - CDS 37621 - 37788 85 ## COG3130 Ribosome modulation factor - Prom 37865 - 37924 3.3 - Term 37981 - 38021 4.1 41 23 Op 1 8/0.042 - CDS 38044 - 38607 668 ## COG3009 Uncharacterized protein conserved in bacteria 42 23 Op 2 11/0.000 - CDS 38604 - 40244 1550 ## COG3008 Paraquat-inducible protein B 43 23 Op 3 5/0.333 - CDS 40249 - 41502 744 ## COG2995 Uncharacterized paraquat-inducible protein A - Prom 41524 - 41583 2.0 44 24 Op 1 6/0.083 - CDS 41632 - 43539 2283 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 45 24 Op 2 . - CDS 43551 - 45659 178 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative - Prom 45686 - 45745 6.4 + Prom 45645 - 45704 3.3 46 25 Tu 1 . + CDS 45757 - 46866 639 ## COG3217 Uncharacterized Fe-S protein - Term 46656 - 46684 0.7 47 26 Tu 1 . - CDS 46863 - 47405 431 ## ECS88_0967 hypothetical protein - Prom 47505 - 47564 6.7 - Term 47502 - 47557 12.9 48 27 Tu 1 . - CDS 47579 - 48589 918 ## COG0167 Dihydroorotate dehydrogenase - Prom 48779 - 48838 6.5 49 28 Tu 1 . + CDS 48533 - 48673 81 ## gi|213615837|ref|ZP_03371663.1| hypothetical protein SentesTyp_15729 + Prom 48681 - 48740 1.9 50 29 Op 1 4/0.542 + CDS 48826 - 49401 600 ## COG0431 Predicted flavoprotein 51 29 Op 2 5/0.333 + CDS 49394 - 50353 917 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 52 29 Op 3 8/0.042 + CDS 50350 - 51495 1158 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 53 29 Op 4 24/0.000 + CDS 51507 - 52298 902 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 54 29 Op 5 . + CDS 52295 - 53062 211 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 + Term 53291 - 53335 6.2 55 30 Tu 1 . - CDS 53280 - 55892 3094 ## COG0308 Aminopeptidase N - Prom 55999 - 56058 4.3 + Prom 56041 - 56100 5.2 56 31 Tu 1 . + CDS 56158 - 57360 1196 ## COG1488 Nicotinic acid phosphoribosyltransferase + Term 57369 - 57398 1.2 57 32 Tu 1 . - CDS 57366 - 57635 99 ## + Prom 57411 - 57470 6.4 58 33 Tu 1 . + CDS 57529 - 58929 1664 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases + Term 58956 - 58982 -1.0 + Prom 59314 - 59373 7.3 59 34 Tu 1 . + CDS 59540 - 60628 1361 ## COG3203 Outer membrane protein (porin) + Term 60653 - 60693 4.2 + Prom 60719 - 60778 4.6 60 35 Tu 1 . + CDS 60813 - 62003 1446 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Term 62018 - 62053 5.8 - Term 62009 - 62038 2.8 61 36 Op 1 7/0.042 - CDS 62053 - 62700 531 ## COG0491 Zn-dependent hydrolases, including glyoxylases 62 36 Op 2 9/0.000 - CDS 62727 - 63275 344 ## COG3108 Uncharacterized protein conserved in bacteria - Prom 63328 - 63387 2.4 - Term 63321 - 63367 5.5 63 36 Op 3 4/0.542 - CDS 63456 - 65303 1243 ## COG2989 Uncharacterized protein conserved in bacteria - Prom 65419 - 65478 6.5 - Term 65527 - 65557 3.0 64 37 Op 1 8/0.042 - CDS 65564 - 70024 5487 ## COG3096 Uncharacterized protein involved in chromosome partitioning 65 37 Op 2 7/0.042 - CDS 70024 - 70728 772 ## COG3095 Uncharacterized protein involved in chromosome partitioning 66 37 Op 3 6/0.083 - CDS 70709 - 72031 1509 ## COG3006 Uncharacterized protein involved in chromosome partitioning 67 37 Op 4 . - CDS 72028 - 72813 679 ## COG0500 SAM-dependent methyltransferases - Prom 72946 - 73005 5.8 68 38 Tu 1 . + CDS 72949 - 73728 627 ## COG1434 Uncharacterized conserved protein + Term 73950 - 73987 -0.9 69 39 Tu 1 . - CDS 73705 - 74598 703 ## ECS88_0947 hypothetical protein - Prom 74635 - 74694 4.8 - Term 74679 - 74720 3.4 70 40 Op 1 11/0.000 - CDS 74752 - 75498 762 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 71 40 Op 2 4/0.542 - CDS 75495 - 75677 197 ## COG2835 Uncharacterized conserved protein 72 40 Op 3 4/0.542 - CDS 75729 - 76961 797 ## COG3214 Uncharacterized protein conserved in bacteria 73 40 Op 4 9/0.000 - CDS 76998 - 77984 682 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 74 40 Op 5 5/0.333 - CDS 77981 - 79729 242 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 75 40 Op 6 . - CDS 79766 - 80914 424 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) - Prom 80949 - 81008 22.0 - Term 80945 - 80982 -0.7 76 41 Tu 1 2/0.917 - CDS 81010 - 82071 524 ## COG0658 Predicted membrane metal-binding protein - Prom 82151 - 82210 2.8 - Term 82214 - 82254 8.3 77 42 Tu 1 . - CDS 82277 - 82561 167 ## PROTEIN SUPPORTED gi|148826039|ref|YP_001290792.1| 50S ribosomal protein L35 - Term 82606 - 82635 3.5 78 43 Op 1 . - CDS 82681 - 82779 150 ## PROTEIN SUPPORTED gi|238903721|ref|ZP_04649193.1| ribosomal protein S1 79 43 Op 2 21/0.000 - CDS 82721 - 84394 2807 ## PROTEIN SUPPORTED gi|15800772|ref|NP_286786.1| 30S ribosomal protein S1 - Term 84448 - 84484 1.3 80 43 Op 3 3/0.833 - CDS 84505 - 85188 267 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 - Prom 85226 - 85285 5.0 - Term 85213 - 85246 2.3 81 44 Tu 1 . - CDS 85361 - 86134 777 ## COG0501 Zn-dependent protease with chaperone function - Prom 86197 - 86256 5.8 - Term 86218 - 86252 5.1 82 45 Op 1 6/0.083 - CDS 86295 - 87578 1214 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase - Term 87596 - 87629 4.1 83 45 Op 2 4/0.542 - CDS 87649 - 88737 1126 ## COG1932 Phosphoserine aminotransferase - Prom 88794 - 88853 3.0 84 46 Tu 1 . - CDS 88936 - 89628 686 ## COG2323 Predicted membrane protein - Prom 89714 - 89773 1.9 + Prom 89673 - 89732 2.7 85 47 Tu 1 . + CDS 89758 - 91518 1898 ## COG1944 Uncharacterized conserved protein + Term 91528 - 91556 0.7 86 48 Op 1 7/0.042 + CDS 91924 - 92781 635 ## COG2116 Formate/nitrite family of transporters 87 48 Op 2 11/0.000 + CDS 92836 - 95118 2631 ## COG1882 Pyruvate-formate lyase + Term 95161 - 95192 3.2 + Prom 95168 - 95227 2.9 88 48 Op 3 . + CDS 95310 - 96050 723 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 96110 - 96167 7.5 - Term 96103 - 96146 8.5 89 49 Tu 1 . - CDS 96157 - 97305 980 ## COG0477 Permeases of the major facilitator superfamily - Prom 97335 - 97394 3.8 + Prom 97405 - 97464 4.4 90 50 Tu 1 . + CDS 97619 - 98245 613 ## COG1335 Amidases related to nicotinamidase + Term 98249 - 98285 2.0 - Term 98237 - 98273 4.3 91 51 Op 1 9/0.000 - CDS 98281 - 99144 868 ## COG3302 DMSO reductase anchor subunit 92 51 Op 2 16/0.000 - CDS 99146 - 99763 625 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 93 51 Op 3 2/0.917 - CDS 99774 - 102218 2408 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 102267 - 102326 4.6 - Term 102406 - 102431 -0.5 94 52 Op 1 8/0.042 - CDS 102457 - 103749 1532 ## COG0172 Seryl-tRNA synthetase - Term 103808 - 103839 -1.0 95 52 Op 2 8/0.042 - CDS 103840 - 105183 1053 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 96 52 Op 3 10/0.000 - CDS 105194 - 105805 616 ## COG2834 Outer membrane lipoprotein-sorting protein - Term 105907 - 105948 2.6 97 52 Op 4 . - CDS 105964 - 107685 1891 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins Predicted protein(s) >gi|296918681|gb|GG773019.1| GENE 1 66 - 665 575 199 aa, chain - ## HITS:1 COG:torD KEGG:ns NR:ns ## COG: torD COG3381 # Protein_GI_number: 16128964 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli K12 # 1 199 1 199 199 358 95.0 4e-99 MTTLTVQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNGLENS IATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFN EPADHLAIYLELLSHLHFSLGEGTVPARRIDGLRQKTLTALREWLPEFAARCRQYDSFGF YAALSQLLLVLVECDYQKR >gi|296918681|gb|GG773019.1| GENE 2 662 - 3208 2667 848 aa, chain - ## HITS:1 COG:torA KEGG:ns NR:ns ## COG: torA COG0243 # Protein_GI_number: 16128963 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 848 1 848 848 1738 98.0 0 MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATATQAATEAVISKEGILTGSHWG AIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQ RGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALH GNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW WCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLA LAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLAR QMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRK GVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMC IFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYG NHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQ GKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIAD MNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK EPVFISPQDASARGIRHGDVVRVFNVRGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGE PGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEY IPASQVKS >gi|296918681|gb|GG773019.1| GENE 3 3208 - 4380 999 390 aa, chain - ## HITS:1 COG:torC KEGG:ns NR:ns ## COG: torC COG3005 # Protein_GI_number: 16128962 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Escherichia coli K12 # 1 390 1 390 390 798 99.0 0 MRKLWNALRRPSARWSVLALVATGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEE YKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRA ELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQ LPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDG DWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQ ATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEISHFDANGWIGTLNGMIGFTSLD KREERTLLKYLQMNASDTAGKAHGDKKEEK >gi|296918681|gb|GG773019.1| GENE 4 4510 - 5202 828 230 aa, chain + ## HITS:1 COG:ECs1150 KEGG:ns NR:ns ## COG: ECs1150 COG0745 # Protein_GI_number: 15830404 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 439 99.0 1e-123 MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDEN GLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRI DLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRE RLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC >gi|296918681|gb|GG773019.1| GENE 5 5175 - 6167 685 330 aa, chain - ## HITS:1 COG:torT KEGG:ns NR:ns ## COG: torT COG1879 # Protein_GI_number: 16128960 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 4 330 16 342 342 628 99.0 1e-180 MLSAFSADNLLRWHDAQHYTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARR YGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVN AIDAPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAI AGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTV VSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVMTPK NADREHIRRSLSPGGFRPVYFYQHTSAAKK >gi|296918681|gb|GG773019.1| GENE 6 6316 - 9018 2418 900 aa, chain + ## HITS:1 COG:ECs1148_1 KEGG:ns NR:ns ## COG: ECs1148_1 COG0642 # Protein_GI_number: 15830402 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 653 1 653 653 1112 98.0 0 MGFALMALLTLTSTLVGWYNLRFISQVEKDNTQALIPTMNMARQLSEASAWELFAAQNLT SADNEKMWQAQGRMLTAQSLKINALLQALREQGFDTTAIEQQEQEISRSLRQQGELVGQR LQLRQQQQQLSQQIVAAADEIARLAQGQANNAATSAGATQAGIYDLIEQHQRQAAESALD RLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIRI EDPGVRTQVATTLTTVSQYSDLLALYQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDT IELRNQHGLAHLEKASARGQYSLLLLGLVSLCALILILWRVVYRSVTRPLAEQTQALQRL LDGDIDSPFPETAGVRELDTIGRLMDAFRSSVHALNRHREQLAAQVKARTAELQELVIEH RQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGE SLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATEIADD VPTALMGDPRRIRQVITNLLSNALRFTDEGHIILRSRTDGEQWLVEVEDSGCGIDPAKLA EIFQPFVQVSSKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRIATAPVP KTVNQAVRLDDLRLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQAIEALQNSEPFAAA LVDFDLPDIDGITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVL GQLLAHYLQLQVNNDQPLDVSQLNEDAHLMGAEKIHEWLILFKQHALPLLDEIDIARASQ DNEKIKRAAHQLKSSCSSLGMRSASQQCAQLEQQPLSAPLPHEEITRSVAALEAWLIRKT >gi|296918681|gb|GG773019.1| GENE 7 9101 - 10174 585 357 aa, chain + ## HITS:1 COG:yccM KEGG:ns NR:ns ## COG: yccM COG0348 # Protein_GI_number: 16128958 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Escherichia coli K12 # 1 357 1 357 357 672 95.0 0 MAEKKRTRWQRRPGTTGGKLPWNDWRNATTWRKATQLLLLAINIYIAITFWYWVRYYETA GSTTFVTRPGGIEGWLPIAGLMNLKYSLATGQLPSVHAAAMLLLVAFIVISLLLKKAFCS WLCPVGTLSELIGDLGNKLFGRQFVLPRWLDIPLRGVKYLLLSFFLYIALLMPAQAIHYF MLSPYSVVMDVKMLDFFRHMGTATLISMIVLLIASLFIRHAWCRYLCPYGALMSVVSLLS PFKIRRNAESCIDCGKCAKSCPSRIPVDKLTQVRTVECTGCMTCVESCPVASTLTFSLQK PAANKKAFALSGWLMTLLVMGIMFAATGYAMYAGVWQSPVPEELYQRLIPQSPMIGH >gi|296918681|gb|GG773019.1| GENE 8 10223 - 10396 264 57 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1006 NR:ns ## KEGG: ECS88_1006 # Name: gnsA # Def: regulator of phosphatidylethanolamine synthesis # Organism: E.coli_S88 # Pathway: not_defined # 1 57 1 57 57 75 100.0 5e-13 MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKMTGLESYDVKIKIM >gi|296918681|gb|GG773019.1| GENE 9 10790 - 11002 298 70 aa, chain - ## HITS:1 COG:ECs1145 KEGG:ns NR:ns ## COG: ECs1145 COG1278 # Protein_GI_number: 15830399 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 133 100.0 9e-32 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR GPAAANVVTL >gi|296918681|gb|GG773019.1| GENE 10 11288 - 11500 168 70 aa, chain + ## HITS:1 COG:ECs1144 KEGG:ns NR:ns ## COG: ECs1144 COG1278 # Protein_GI_number: 15830398 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 137 100.0 5e-33 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR GPTAANVYLS >gi|296918681|gb|GG773019.1| GENE 11 11488 - 12798 710 436 aa, chain - ## HITS:1 COG:no KEGG:APECO1_84 NR:ns ## KEGG: APECO1_84 # Name: appA # Def: phosphoanhydride phosphorylase # Organism: E.coli_APEC # Pathway: Inositol phosphate metabolism [PATH:ecv00562]; Aminobenzoate degradation [PATH:ecv00627]; Riboflavin metabolism [PATH:ecv00740]; Microbial metabolism in diverse environments [PATH:ecv01120] # 1 436 11 446 446 862 100.0 0 MKAILIPFLSLLIPLTPKFAFAQSEPELKLESVVIVSRHGVRAPTKATQLMQDVTPDAWP TWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKEGCPQPGQVAVIADVDERTRKTGE AFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGH RQTAFRELERVLNFPQSNLCLNRKKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLT EIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIMTA LAPHPPQKQVYGVTLPTSVLFIAGHDTNLANLGGALELNWTLPGQPDNTPPGGELVFERW RRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNTPPGEVKLTLAGCEERNARGMCSLAGFTQ IVNEARIPACALHQDK >gi|296918681|gb|GG773019.1| GENE 12 12878 - 12970 57 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWYLLWFVGILLMCSLSTLVLVWLDPRLKS >gi|296918681|gb|GG773019.1| GENE 13 12983 - 14119 1130 378 aa, chain - ## HITS:1 COG:appB KEGG:ns NR:ns ## COG: appB COG1294 # Protein_GI_number: 16128945 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Escherichia coli K12 # 1 378 1 378 378 666 100.0 0 MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDDERRIVINSVGAHWEGN QVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPLAFDYRGKIADARWRKMWD AGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGSFWQLLTPFPLLCGLLSLGMV ILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLAGYWLWVGIDGFVLLAQDANGPS NPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPLLTVMAIYRGRPGWGFLMASLMQFG VIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQLTLSIMLVIVLIFLPIVLLYTLWSYYK MWGRMTTETLRRNENELY >gi|296918681|gb|GG773019.1| GENE 14 14131 - 15675 1575 514 aa, chain - ## HITS:1 COG:ECs1134 KEGG:ns NR:ns ## COG: ECs1134 COG1271 # Protein_GI_number: 15830388 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 963 99.0 0 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALRSFAIGSVFGTLAIISTLQLGDS SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFAIKIPALLGILATHSL DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRELEGDLGYGMLLSRY APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG >gi|296918681|gb|GG773019.1| GENE 15 15809 - 16666 725 285 aa, chain - ## HITS:1 COG:no KEGG:APECO1_81 NR:ns ## KEGG: APECO1_81 # Name: hyaF # Def: hydrogenase-1 operon protein HyaF # Organism: E.coli_APEC # Pathway: not_defined # 1 285 21 305 305 565 100.0 1e-160 MSETFFHLLGPGTQPNDDSFSMNPLPITCRVNGEPSMAALEQCAHSPQVIALLNELQHQL SERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQADDSESEIQEAIFCGLWRV RRRHGEQLLEDKLEAGCAPLALWQAATQNVLPTDSLLPPPIDGLMNGLPLAHELLAHVRN PDAQPHSINMTQLPISEADRLFLSRLCGPGNIQIRTIGYGESYINATGLRHVWHLRCTDT LKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVCQWLAEGAPT >gi|296918681|gb|GG773019.1| GENE 16 16663 - 17061 448 132 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0998 NR:ns ## KEGG: ECS88_0998 # Name: hyaE # Def: hydrogenase-1 operon protein HyaE # Organism: E.coli_S88 # Pathway: not_defined # 1 132 1 132 132 266 100.0 3e-70 MSNDTPFNALWQRMLARGWTPVSECRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGE LLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGNYRGVLNGIHPWAELINLM RGLVEPQQERAS >gi|296918681|gb|GG773019.1| GENE 17 17058 - 17645 688 195 aa, chain - ## HITS:1 COG:ECs1131 KEGG:ns NR:ns ## COG: ECs1131 COG0680 # Protein_GI_number: 15830385 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 195 1 195 195 353 98.0 1e-97 MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEDVEIVDGGTQGLNLLGYVESAGH LLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSEVLALADIRGHLPAHIALV GLQPAMLDDYGGSLSELAREQLPAAEQAALAQLAAWGIVPQPANESRCLNYDCLSMENYE GVRLRQYRMRLEEQG >gi|296918681|gb|GG773019.1| GENE 18 17642 - 18148 504 168 aa, chain - ## HITS:1 COG:ECs1130 KEGG:ns NR:ns ## COG: ECs1130 COG1969 # Protein_GI_number: 15830384 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I cytochrome b subunit # Organism: Escherichia coli O157:H7 # 1 168 68 235 235 306 98.0 1e-83 MIFTVVLLMRIYWAFVGNHYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNP IAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLG MWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS >gi|296918681|gb|GG773019.1| GENE 19 18166 - 18375 179 69 aa, chain - ## HITS:1 COG:ECs1130 KEGG:ns NR:ns ## COG: ECs1130 COG1969 # Protein_GI_number: 15830384 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I cytochrome b subunit # Organism: Escherichia coli O157:H7 # 1 50 1 50 235 103 100.0 6e-23 MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEAGGGAGGGGRR ICSIWATSG >gi|296918681|gb|GG773019.1| GENE 20 18394 - 20187 1854 597 aa, chain - ## HITS:1 COG:hyaB KEGG:ns NR:ns ## COG: hyaB COG0374 # Protein_GI_number: 16128939 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I large subunit # Organism: Escherichia coli K12 # 1 597 1 597 597 1271 99.0 0 MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIIL QGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHL VHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSPGYFFDVQNRLKKFVEGGQLG IFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVFGGKNPHPNWIVGGMPCA INIDESGAVGAVNMERLNLVQSIITRTADFINNVMIPDALAIGQFNKPWSEIGTGLSDKC VLSYGAFPDIANDFSEKSLLMPGGAVINGDFNNVLPVDLVDPQQVQEFVDHAWYRYPNDQ VGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQERYSWIKAPRWRGNAMEVGPLARTLIAY HKGDAATVESVDRMMSALKLPLSGIQSTLGRILCRAHEAQWAAGKLQYFFDKLMTNLKNG NLATASTEKWEPATWPTECRGVGFTEAPRGALGHWAAIRDGKIDLYQCVVPTTWNASPRD PKGQIGAYEAALMNTKMAIPEQPLEILRTLHSFDPCLACSTHVLGDDGSELISVQVR >gi|296918681|gb|GG773019.1| GENE 21 20184 - 21302 824 372 aa, chain - ## HITS:1 COG:hyaA KEGG:ns NR:ns ## COG: hyaA COG1740 # Protein_GI_number: 16128938 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I small subunit # Organism: Escherichia coli K12 # 1 372 1 372 372 736 99.0 0 MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAWALENKPRIPVVWIHGL ECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAEEVFEDIIAQYNGKYILAV EGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTCASWGCVQAARPNPTQATPID KVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVDRMGRPLMFYGQRIHDKCYRRAH FDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACSSTRWNDGVSFPIQSGHGCLGCAEN GFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGVVAAAVGVHAAASAVDQRRRHNQQPTE TEHQPGNEDKQA >gi|296918681|gb|GG773019.1| GENE 22 22023 - 22682 759 219 aa, chain + ## HITS:1 COG:yccA KEGG:ns NR:ns ## COG: yccA COG0670 # Protein_GI_number: 16128937 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 219 1 219 219 330 100.0 8e-91 MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMY GLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCC SAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFET SNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD >gi|296918681|gb|GG773019.1| GENE 23 22774 - 23103 510 109 aa, chain + ## HITS:1 COG:ECs1053 KEGG:ns NR:ns ## COG: ECs1053 COG2920 # Protein_GI_number: 15830307 # Func_class: P Inorganic ion transport and metabolism # Function: Dissimilatory sulfite reductase (desulfoviridin), gamma subunit # Organism: Escherichia coli O157:H7 # 1 109 20 128 128 218 99.0 3e-57 MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGIALSPEHWEVVRFVRDFYLEFNTS PAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI >gi|296918681|gb|GG773019.1| GENE 24 23100 - 23378 352 92 aa, chain - ## HITS:1 COG:ECs1052 KEGG:ns NR:ns ## COG: ECs1052 COG1254 # Protein_GI_number: 15830306 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Escherichia coli O157:H7 # 1 92 1 92 92 180 94.0 5e-46 MSKVCIIAWIYGRVQGVGFRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGDEGKVEKLIQ WLKSGGPRSARVERVLSEPHHPSGELTDFRIR >gi|296918681|gb|GG773019.1| GENE 25 23473 - 24663 578 396 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 22 389 21 386 396 227 32 2e-58 MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQ IRARVWTFDPSESIDIAFFTRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRF GNFLVLQLLSAGAEYQRAALISALQTLYPECAIYDRSDVAVRKKEGMELTQGPITGELPP ALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALM GGCSQVVSVDTSHEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDA GRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM >gi|296918681|gb|GG773019.1| GENE 26 24721 - 25038 420 105 aa, chain + ## HITS:1 COG:ECs1050 KEGG:ns NR:ns ## COG: ECs1050 COG3785 # Protein_GI_number: 15830304 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 105 18 122 122 200 100.0 6e-52 MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDN GLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPRLRN >gi|296918681|gb|GG773019.1| GENE 27 25083 - 25496 608 137 aa, chain - ## HITS:1 COG:yccU KEGG:ns NR:ns ## COG: yccU COG1832 # Protein_GI_number: 16128932 # Func_class: R General function prediction only # Function: Predicted CoA-binding protein # Organism: Escherichia coli K12 # 1 137 28 164 164 268 99.0 3e-72 MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQG YGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQLGVINEQAAVLARDAGLNV VMDRCPAIEIPRLGLAK >gi|296918681|gb|GG773019.1| GENE 28 25471 - 25629 80 52 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_2154 NR:ns ## KEGG: EcSMS35_2154 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 52 5 56 56 79 100.0 4e-14 MPAISVSFIISSRLFNKVYDKADMPTMQLIRMNESKSGKYVYMLVSMIKEKF >gi|296918681|gb|GG773019.1| GENE 29 25669 - 26331 618 220 aa, chain + ## HITS:1 COG:ECs1048 KEGG:ns NR:ns ## COG: ECs1048 COG3110 # Protein_GI_number: 15830302 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 220 1 220 220 409 100.0 1e-114 MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLV FRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLD GDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASLPQFATMMADDSTLLSGVSEL DAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS >gi|296918681|gb|GG773019.1| GENE 30 26418 - 26885 426 155 aa, chain + ## HITS:1 COG:ECs1047 KEGG:ns NR:ns ## COG: ECs1047 COG1803 # Protein_GI_number: 15830301 # Func_class: G Carbohydrate transport and metabolism # Function: Methylglyoxal synthase # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 312 99.0 1e-85 MYIMELTTRTLPSRKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGTTGNLISRATG MNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVA TNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK >gi|296918681|gb|GG773019.1| GENE 31 26917 - 28989 1612 690 aa, chain - ## HITS:1 COG:helD KEGG:ns NR:ns ## COG: helD COG0210 # Protein_GI_number: 16128929 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli K12 # 7 690 1 684 684 1336 99.0 0 MWIYRVMELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVW GELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRT GENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREVWRKCQAWLKDIEGARLQHN QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL ARGEASPEQILLLAFGRKAAEEMHERIRERLHTEDITARTFHALALHIIQQGSKKVPIVS KLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLAS RLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL IHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYR FSGAQMSLTTAFHENFGEGDRCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD KKAVTLLDEGQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI HASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRAR HRVWALFNKENPSPFVDILKNLDVPVARKP >gi|296918681|gb|GG773019.1| GENE 32 29094 - 29540 490 148 aa, chain + ## HITS:1 COG:yccF KEGG:ns NR:ns ## COG: yccF COG3304 # Protein_GI_number: 16128928 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 134 1 134 148 239 100.0 2e-63 MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEITKLSLVPYGNEAIHVD ELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQCISIIGIPVGIANFKIAAI ALWPVGRRVVSVETAQAAREANARRRFQ >gi|296918681|gb|GG773019.1| GENE 33 29550 - 31712 1828 720 aa, chain + ## HITS:1 COG:ECs1044 KEGG:ns NR:ns ## COG: ECs1044 COG1289 # Protein_GI_number: 15830298 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 720 1 720 720 1424 99.0 0 MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLTIPLTLGMVAAALTDLD DRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLSTSGFILLGGLGQRYATIAF GALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIGHLLFPVRPLQDNLARCYEQL ARYLELKSRMFDPDIEDESQAPLYDLALANGQLMATLNQTKLSLLTRLRGDRGQRGTRRT LHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFRFQRLMSMQGQACQQLSRCILLRQP YQHDPHFERAFTHIDAALERMRDNGAPADLLKTLGFLLNNLRAIDAQLATIESEQAQALP HNNDENELADDSPHGLSDIWLRLSRHFTPESALFRHAVRMSLVLCFGYAIIQITGMHHGY WILLTSLFVCQPNYNATRHRLKLRIIGTLVGIAIGIPVLWFVPSLEGQLVLLVITGVLFF AFRNVQYAHATMFITLLVLLCFNLLGEGFEVALPRVIDTLIGCAIAWAAVSYIWPDWKFR NLPRMLERATEANCRYLDAILEQYHQGRDNRLAYRIARRDAHNRDAELASVVSNMSSEPN VTPQIREAAFRLLCLNHTFTSYISALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADE ERVNQALAGLKQRMQQLEPRADSKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA >gi|296918681|gb|GG773019.1| GENE 34 31675 - 32304 547 209 aa, chain - ## HITS:1 COG:yccR KEGG:ns NR:ns ## COG: yccR COG3070 # Protein_GI_number: 16128926 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Escherichia coli K12 # 1 209 1 209 209 404 99.0 1e-113 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYC VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLK DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE AALPVARRQELAEWADSLTPKQEFPAELE >gi|296918681|gb|GG773019.1| GENE 35 32523 - 33032 281 169 aa, chain + ## HITS:1 COG:ECs1042 KEGG:ns NR:ns ## COG: ECs1042 COG5404 # Protein_GI_number: 15830296 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: SOS-response cell division inhibitor, blocks FtsZ ring formation # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 269 98.0 2e-72 MYTAGYAHRDSSFSSTASKIARVSTENTTAGLISEVVYREDQPMMTQLLLLPLLQQLGQQ SRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVESMVRALRTGNYSVVIGWLA DDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSGLKIHSNLYH >gi|296918681|gb|GG773019.1| GENE 36 33388 - 34428 1164 346 aa, chain + ## HITS:1 COG:ECs1041 KEGG:ns NR:ns ## COG: ECs1041 COG2885 # Protein_GI_number: 15830295 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli O157:H7 # 1 346 1 346 346 653 99.0 0 MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGA FGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGG MVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDN GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFTFNKATLKPEGQAALDQ LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRAQSVVDYLISKGIPADKISARGM GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA >gi|296918681|gb|GG773019.1| GENE 37 34566 - 35018 449 150 aa, chain - ## HITS:1 COG:ECs1040 KEGG:ns NR:ns ## COG: ECs1040 COG3120 # Protein_GI_number: 15830294 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 249 99.0 2e-66 MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDELLSLENEPVLVNGWIDK HMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIV QLIEDAENKEKYANKMSSLKQDLQALLGKE >gi|296918681|gb|GG773019.1| GENE 38 35204 - 36964 1380 586 aa, chain + ## HITS:1 COG:ECs1039 KEGG:ns NR:ns ## COG: ECs1039 COG1067 # Protein_GI_number: 15830293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent protease # Organism: Escherichia coli O157:H7 # 1 586 1 586 586 1157 99.0 0 MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFML AKAPEESEYLNLIADAARTLQSDAGQLVGGHYEVSGHTIRLRHAVSADDNFATLTQVVAA DWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRTLLAQPLLWMRLKNIVNRERF DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD AESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCQEVA SLCDGDTFSGEQLNLMLQQREWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEF PGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP FSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE KIEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEDKFTIWAVDDVTDALPLL LNLVWDGEGQTTLMQTIQERIAQASQQEGRHRFPWPLRWLNWFIPN >gi|296918681|gb|GG773019.1| GENE 39 37033 - 37551 707 172 aa, chain + ## HITS:1 COG:ECs1038 KEGG:ns NR:ns ## COG: ECs1038 COG0764 # Protein_GI_number: 15830292 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 343 99.0 7e-95 MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELD INPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLP TAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTANDLKVGLFQDTSAF >gi|296918681|gb|GG773019.1| GENE 40 37621 - 37788 85 55 aa, chain - ## HITS:1 COG:ECs1037 KEGG:ns NR:ns ## COG: ECs1037 COG3130 # Protein_GI_number: 15830291 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome modulation factor # Organism: Escherichia coli O157:H7 # 1 55 1 55 55 80 100.0 5e-16 MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGWREAMADRVVMA >gi|296918681|gb|GG773019.1| GENE 41 38044 - 38607 668 187 aa, chain - ## HITS:1 COG:ECs1036 KEGG:ns NR:ns ## COG: ECs1036 COG3009 # Protein_GI_number: 15830290 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 6 187 1 182 182 336 98.0 2e-92 MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGN GVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTV TEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDGYDEMVKVLASVWSQEAASIA QEIKRLP >gi|296918681|gb|GG773019.1| GENE 42 38604 - 40244 1550 546 aa, chain - ## HITS:1 COG:ECs1035 KEGG:ns NR:ns ## COG: ECs1035 COG3008 # Protein_GI_number: 15830289 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Escherichia coli O157:H7 # 1 546 1 546 546 1080 99.0 0 MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPEVTLITANAEGIEGGKT TIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDTVFWVVKPQIGREGISGLG TLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRVLLDSKKAGQLSPGDPVLFRG YRVGSVETSTFDTQKRNISYQLFINAPYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSL TTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQ PGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHL GELLKRGLRGSLKTGNLVTGALYVDLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQR LMEALDKINKLPLNPMIEQATSTLSESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQST LRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPE PKRAKQ >gi|296918681|gb|GG773019.1| GENE 43 40249 - 41502 744 417 aa, chain - ## HITS:1 COG:pqiA KEGG:ns NR:ns ## COG: pqiA COG2995 # Protein_GI_number: 16128917 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Escherichia coli K12 # 1 417 1 417 417 787 99.0 0 MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAWDAPRQRPTAYALAALF MLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTFFLLFVQLVPAFCLITILL LVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLF CVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIRQGLRSCSCCTAILPADESVCPR CSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIMVTDLLGSKMPSTILAGVILLWSEG SYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHGKRDSERMHLIYEVVEFVGRWSMIDVF VIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFSAMTFDPRLSWDRQPESEHEES >gi|296918681|gb|GG773019.1| GENE 44 41632 - 43539 2283 635 aa, chain - ## HITS:1 COG:ECs1033 KEGG:ns NR:ns ## COG: ECs1033 COG0488 # Protein_GI_number: 15830287 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 635 1 635 635 1189 99.0 0 MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRI IYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNEL AKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGGWLRKAALGRALVSNPRVLLL DEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRNMATRIVDLDRGKLVTYPGNYDQ YLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKAMRRERGERRE VMGTAKMQVEEASRSGKIVFEMEDVCYQVDGKQLVKDFSAQVLRGDKIALIGPNGCGKTT LLKLMLGQLQADSGRIHVGTKLEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPRHV LGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLE ELIDSYQGTVLLVSHDRQFVDNTVTECWIFEGGGKIGRYVGGYHDARGQQEQYVALKQPA VKKIEEAAAPKAETVKRSSSKLSYKLQRELEQLPQLLEDLEAKLEALQTQVADASFFSQP HEQTQKVLADMAAAEQELEQAFERWEYLEALKNGG >gi|296918681|gb|GG773019.1| GENE 45 43551 - 45659 178 702 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 487 667 174 328 396 73 29 5e-12 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGMAPIKETLAAA IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWTQHDEAIWQEVK AEAQTRARKGLAEYSSHFFGSDSDARVIQRARTNARLAGIGELITFEVNDVAQLANPLPK GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD KQYKAKNGPLDCVQKNYHVAESTPDSKPVMAAEDYANRLRKNLKKFEKWARQEGIECYRL YDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLK TRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA WLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG FRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA >gi|296918681|gb|GG773019.1| GENE 46 45757 - 46866 639 369 aa, chain + ## HITS:1 COG:ycbX_1 KEGG:ns NR:ns ## COG: ycbX_1 COG3217 # Protein_GI_number: 16128914 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli K12 # 1 273 1 273 273 558 97.0 1e-159 MATLTRLFIHPVKSMRGIGLTHTLADVSGLAFDRIFMITETDGTFITARQFPLMVRFTPS PVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQL RWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGA SAWEEDSWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD VDFGQNLIVRNSGVIRVGDEVEILATAPAKIYGAGAADDTANITQQPDANVDIDWQGQAF RGNNQQVLLEQLENQGIRIPYSCHAGICGSCRVQLLEGEVTPLKKSAIGDDGTILCCSCV PKTALKLAR >gi|296918681|gb|GG773019.1| GENE 47 46863 - 47405 431 180 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0967 NR:ns ## KEGG: ECS88_0967 # Name: ycbW # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 180 1 180 180 370 100.0 1e-101 MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSF EEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWMPMPGDAAYVWLSDT HEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV >gi|296918681|gb|GG773019.1| GENE 48 47579 - 48589 918 336 aa, chain - ## HITS:1 COG:ECs1029 KEGG:ns NR:ns ## COG: ECs1029 COG0167 # Protein_GI_number: 15830283 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 336 1 336 336 675 99.0 0 MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPAKPVNCMGLTFKNPLGL AAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGV DNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPG LRTLQYGEALDDLLTAIKNKQNDLQVMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNID GVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSQELNGRLPIIGVGGIDS VIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTHI >gi|296918681|gb|GG773019.1| GENE 49 48533 - 48673 81 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|213615837|ref|ZP_03371663.1| ## NR: gi|213615837|ref|ZP_03371663.1| hypothetical protein SentesTyp_15729 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] # 1 44 1 44 45 71 88.0 2e-11 MSALWIELEKGFTNEGVVHELSWIPGVQTGGVLCASSDQKGIDLRQ >gi|296918681|gb|GG773019.1| GENE 50 48826 - 49401 600 191 aa, chain + ## HITS:1 COG:ZycbP KEGG:ns NR:ns ## COG: ZycbP COG0431 # Protein_GI_number: 15800798 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Escherichia coli O157:H7 EDL933 # 1 191 1 191 191 350 96.0 7e-97 MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFVPEDLLYARFDSPALKTF TEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVVLPLATGGTVAHLLAVDYA LKPVLSTLKAQEILHGVFADDSQVIDYQHKPQFTPNLQTRLDTALETFWQALHRRDVQVP DLLSLRGNAHA >gi|296918681|gb|GG773019.1| GENE 51 49394 - 50353 917 319 aa, chain + ## HITS:1 COG:ssuA KEGG:ns NR:ns ## COG: ssuA COG0715 # Protein_GI_number: 16128903 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Escherichia coli K12 # 1 319 15 333 333 596 97.0 1e-170 MRKIIKLALAGLLSVSTLAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPQTKISW VEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSP IKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAW AIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLTTFSEADALT RSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPLSAEVAALQQQTADLFYENRLVPK KVDIRQRIWQPTQLEGKQL >gi|296918681|gb|GG773019.1| GENE 52 50350 - 51495 1158 381 aa, chain + ## HITS:1 COG:ECs1018 KEGG:ns NR:ns ## COG: ECs1018 COG2141 # Protein_GI_number: 15830272 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 381 1 381 381 750 98.0 0 MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSCEDAWL VAASMIPVTQRLKFLVALRPSVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDG VFLDHSERYEASAEFTQVWRRLLLGETVDFNGKHIHVRGAKLLFPPIQQPYPPLYFGGSS DVAQELAAEQVDLYLTWGEPPELVKEKIEHVRAKAAAHGRKIRFGVRLHVIVRETNDEAW QAAERLISRLDDETIAKAQAAFARTDSVGQQRMAALHNGKRDNLEISPNLWAGVGLVRGG AGTALVGDGPTVAARINEYAALGIDSFVLSGYPHLEEAYRVGELLFPHLDVAIPEIPQPQ PLNPQGEAVANDFIPRNVAQS >gi|296918681|gb|GG773019.1| GENE 53 51507 - 52298 902 263 aa, chain + ## HITS:1 COG:ssuC KEGG:ns NR:ns ## COG: ssuC COG0600 # Protein_GI_number: 16128901 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Escherichia coli K12 # 1 263 16 278 278 420 99.0 1e-117 MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQ HLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWF GIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPS IMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV SAQLLERLWLRWNPAYHLKEATV >gi|296918681|gb|GG773019.1| GENE 54 52295 - 53062 211 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 12 211 9 218 309 85 31 8e-16 MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL ETPTAGDVLAGTTPLAEIQDDTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARQALAAV GLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQ EHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDIPRPRRLGSVRLAELEAEVLQR VMQRGHSEQPIRRHG >gi|296918681|gb|GG773019.1| GENE 55 53280 - 55892 3094 870 aa, chain - ## HITS:1 COG:ECs1015 KEGG:ns NR:ns ## COG: ECs1015 COG0308 # Protein_GI_number: 15830269 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Escherichia coli O157:H7 # 1 870 1 870 870 1744 99.0 0 MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVRHGASDVPLRLNGEDLK LVSVYINDEPWTAWKEEEGALVISNLPERFTLKIVNEISPAANTALEGLYQSGDALCTQC EAEGFRHITYYLDRPDVLARFTTKIIADKTKYPFLLSNGNRVAQGELENGRHWVRWQDPF PKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEER FGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYF HNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPM AHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDD FVQAMEDASNVDLSHFRRWYSQSGTPVVTVKDDYNPETEQYTLTISQRTPATPDQAEKQP LHIPFAVELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPV KLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFR AVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIY NANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAA VAAQLPCRDALMQEYDDKWHQDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPN RIRSLIGAFAGSNPAAFHAEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKR QEKMRAALEQLKGLENLSGDLYEKITKALA >gi|296918681|gb|GG773019.1| GENE 56 56158 - 57360 1196 400 aa, chain + ## HITS:1 COG:pncB KEGG:ns NR:ns ## COG: pncB COG1488 # Protein_GI_number: 16128898 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 400 1 400 400 819 99.0 0 MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGDDLLGIYADAIREQVQA MQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSNDNGKLDIRLSGPWREVIL WEVPLLAVISEMVHRYRSPQADVAQALDTLENKLVDFSALTAGLDMSRFHLMDFGTRRRF SREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQAHEWFQAHQQISPDLANSQRAA LAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASRYQGLRHDSGDPVEWGEKAIAHYEK LGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQLSFGIGTRLTCDIPQVKPLNIVIKLVE CNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPHIKKAS >gi|296918681|gb|GG773019.1| GENE 57 57366 - 57635 99 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPAFESRRVRTHPRTVTSLSTATRPWSTSATGTTLIIFSLLIVGKNKHLSTRKWGDTYVT WHLQSDKQNSQMQRKISELKVKKGSRLAP >gi|296918681|gb|GG773019.1| GENE 58 57529 - 58929 1664 466 aa, chain + ## HITS:1 COG:asnS KEGG:ns NR:ns ## COG: asnS COG0017 # Protein_GI_number: 16128897 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 466 1 466 466 959 100.0 0 MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPN YNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEY LREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVS TLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNT SRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRL ERFIEADFAQVDYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYP KDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWY RDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNASF >gi|296918681|gb|GG773019.1| GENE 59 59540 - 60628 1361 362 aa, chain + ## HITS:1 COG:ompF KEGG:ns NR:ns ## COG: ompF COG3203 # Protein_GI_number: 16128896 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 362 1 362 362 619 98.0 1e-177 MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDM TYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDY GRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYL GKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEESSLGKGKKAEQWATGL KYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKS KAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVY QF >gi|296918681|gb|GG773019.1| GENE 60 60813 - 62003 1446 396 aa, chain + ## HITS:1 COG:aspC KEGG:ns NR:ns ## COG: aspC COG1448 # Protein_GI_number: 16128895 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 396 1 396 396 809 99.0 0 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE TTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSV KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGC CHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAALHKELIV ASSYSKNFGLYNERVGACTLVAADSETVERAFSQMKAAIRANYSNPPAHGASVVATILSN DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLR LREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL >gi|296918681|gb|GG773019.1| GENE 61 62053 - 62700 531 215 aa, chain - ## HITS:1 COG:ECs1010 KEGG:ns NR:ns ## COG: ECs1010 COG0491 # Protein_GI_number: 15830264 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 449 100.0 1e-126 MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGLTLMQILLTHGHLD HVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEECQPLTPDRWLNEGDTISIG NVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGRSDFPRGDHNQLISSIKDKLL PLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW >gi|296918681|gb|GG773019.1| GENE 62 62727 - 63275 344 182 aa, chain - ## HITS:1 COG:ECs1009 KEGG:ns NR:ns ## COG: ECs1009 COG3108 # Protein_GI_number: 15830263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 361 100.0 1e-100 MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRG YIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNEL RARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPAR HW >gi|296918681|gb|GG773019.1| GENE 63 63456 - 65303 1243 615 aa, chain - ## HITS:1 COG:ycbB KEGG:ns NR:ns ## COG: ycbB COG2989 # Protein_GI_number: 16128892 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 615 1 615 615 1183 99.0 0 MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIM AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL AEVAIAGFQPQFNKWVELLTDPGVNGMTRDVVLSDAMMGYLHFIANIPVKGTRWLYSSKP YALSTPPLSVINQWQLALDQGQLPTFVAGLAPQHPQYAAMHESLLALLSDTKPWPQLTGK ATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKLMD KQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLA LNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLP FRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANM LLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA RSSSQIVSKAEQLIR >gi|296918681|gb|GG773019.1| GENE 64 65564 - 70024 5487 1486 aa, chain - ## HITS:1 COG:mukB KEGG:ns NR:ns ## COG: mukB COG3096 # Protein_GI_number: 16128891 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli K12 # 1 1486 1 1486 1486 2518 99.0 0 MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHF RNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSHHQRVVVGVRLQQVAGRDRKVDIKP FAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAMEGVQFKQFNSITDYHSLMFD LGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALR ENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMRHANERRVHLDKALEFRRELHTSRK QLAAEQYKHVDMARELAEHNGAEGDLEADYQAASDHLNLVQTALRQQEKIERYEADLDEL QIRLEEQNEVVAEAIERQEENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQYNQAI AALNRAKELCHLPDLTADSAAEWLETFQAKELEATEKMLSLEQKMSMAQTAHSQFEQAYQ LVVAINGPLARNEAWDVARELLREGVDQRHLAEQVQPLRMRLSELEQRLREQQEAERLLA DFCKRQGKNFDIDELEALHQELEARIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQR APVWLAAQNSLNQLSEQCGEEFTSSQDVTEFLQQLLEREREAIVERDEVGARKNAVDEEI ERLSQPGGSEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQV TEHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGR AARESRIESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQ LNSRRVELERALSNHENDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRE RLDEAQEAARFVQQFGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFAL TEVVQRRAHFSYSDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLNQYNQV LASLKSSYDTKKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEK ALTFCEAEMDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAY LSADDLRSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQ DIIRTDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQ GLQNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVM VVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPENISP EKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGSDEAPSQAS >gi|296918681|gb|GG773019.1| GENE 65 70024 - 70728 772 234 aa, chain - ## HITS:1 COG:ECs1006 KEGG:ns NR:ns ## COG: ECs1006 COG3095 # Protein_GI_number: 15830260 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 442 99.0 1e-124 MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNHAFLMDFQEYLEEFYAR YNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLANEGIFTQQEL YDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLNRLRRLGMVWFMGHDSSKFRI TESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQLNDETEESQPDSGEEE >gi|296918681|gb|GG773019.1| GENE 66 70709 - 72031 1509 440 aa, chain - ## HITS:1 COG:mukF KEGG:ns NR:ns ## COG: mukF COG3006 # Protein_GI_number: 16128889 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli K12 # 1 440 1 440 440 830 99.0 0 MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLDGEMSEGELVDAFRHVS DAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYRLTPLGIGITDYYIRQREF STLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLMDE QQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDAT MTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHVHKFIRTAIDMDKNRVFAQR LRQSVQTYFDEPWALTYANADRLLDMRDEEMVLRDEEVTGELPEDLEYEEFNEIREQLAA IIEEQLAVYKTRQVPLDLGLVVREYLSQYPRARHFDVARIVIDQAVRLGVAQADFTGLPA KWQPINDYGAKVQAHVIDKY >gi|296918681|gb|GG773019.1| GENE 67 72028 - 72813 679 261 aa, chain - ## HITS:1 COG:smtA KEGG:ns NR:ns ## COG: smtA COG0500 # Protein_GI_number: 16128888 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 261 1 261 261 537 99.0 1e-153 MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAI KMAERGHQVILCDLSVQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTL SPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEP YITLGRYIHVTARKPQSKDKV >gi|296918681|gb|GG773019.1| GENE 68 72949 - 73728 627 259 aa, chain + ## HITS:1 COG:ECs1003 KEGG:ns NR:ns ## COG: ECs1003 COG1434 # Protein_GI_number: 15830257 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 452 100.0 1e-127 MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFISIGWLALLLLSLQPVAD RLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENP GSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIGDAP FLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYE TLGRIWQWLKGSSGEPRQE >gi|296918681|gb|GG773019.1| GENE 69 73705 - 74598 703 297 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0947 NR:ns ## KEGG: ECS88_0947 # Name: ycbJ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 297 1 297 297 587 100.0 1e-166 MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLMARSFSAPGKARQLAWK TTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEAPARTPERWEQLKDQIVEA LLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLNQFNNTGLTMQDKRILFRTRE CLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMVGPGLMLWAPREYELFRLMDNSL AEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVNTGRFSRRNFDLASKSLLPWLA >gi|296918681|gb|GG773019.1| GENE 70 74752 - 75498 762 248 aa, chain - ## HITS:1 COG:ECs1001 KEGG:ns NR:ns ## COG: ECs1001 COG1212 # Protein_GI_number: 15830255 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 483 98.0 1e-136 MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEA AGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQ VGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKDLETVGDNFLR HLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL KRVRAEMR >gi|296918681|gb|GG773019.1| GENE 71 75495 - 75677 197 60 aa, chain - ## HITS:1 COG:ECs1000 KEGG:ns NR:ns ## COG: ECs1000 COG2835 # Protein_GI_number: 15830254 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 60 1 60 60 119 100.0 2e-27 MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESKS >gi|296918681|gb|GG773019.1| GENE 72 75729 - 76961 797 410 aa, chain - ## HITS:1 COG:ycaQ KEGG:ns NR:ns ## COG: ycaQ COG3214 # Protein_GI_number: 16128883 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 410 1 410 410 799 97.0 0 MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVVRSPYLVL FSRLGDYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQ EHAAEIALLIQHIHDKGPVRSADFEHPRKGASGWWEWKPHKRHLEGLFTAGKVMVIERRN FQRVYDLTHRVMPDWDDERDLVSQAEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA WREARAEQQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKR AEQLFDFSYRLECYIPAPKRQYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEG IKPTTTLQKGLRQAITDFANWQQATRVTLGRCPQGLFTDCRAGWEIDPVA >gi|296918681|gb|GG773019.1| GENE 73 76998 - 77984 682 328 aa, chain - ## HITS:1 COG:ECs0998 KEGG:ns NR:ns ## COG: ECs0998 COG1663 # Protein_GI_number: 15830252 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Escherichia coli O157:H7 # 1 328 1 328 328 640 98.0 0 MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRAPVPVVVVGNLTAGGNG KTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTTTAQAGDEPVLIYQRTGAP VAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVEIVVIDGVRRFGNGWWLPAGP MRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNLRTGTRCDVAQLEHVVAIAGIGH PPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALVSAGQTLVMTEKDAVKCRAFAEENW WYLPVDAQLSGDEPAKLLAQLTSLASGH >gi|296918681|gb|GG773019.1| GENE 74 77981 - 79729 242 582 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 359 568 17 229 245 97 32 2e-19 MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTD RSVLMWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQS TGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLAPIVSI AIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQ GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKS LTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALR NINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVA LVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVL LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS TIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQFGQ >gi|296918681|gb|GG773019.1| GENE 75 79766 - 80914 424 382 aa, chain - ## HITS:1 COG:ZycaI_2 KEGG:ns NR:ns ## COG: ZycaI_2 COG2333 # Protein_GI_number: 15800774 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Escherichia coli O157:H7 EDL933 # 57 382 1 326 326 603 96.0 1e-172 MPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSL ALLFWGLKSLPEGWINIAERWQWLTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQ KPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEG VILSHEHLDHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGS NDKGNNHSCVVKIDDGTNSILLTGDIEAPAEQKMLSRYWQQMQATLLQVPHHGSNTSSSL PLIQRVNGKVALASASRYNAWRLPSSKVKHRYQQQGYKWLDTPHQGQITVNFSAQGWRIS SLREQILPRWYHQWFGVPVDNG >gi|296918681|gb|GG773019.1| GENE 76 81010 - 82071 524 353 aa, chain - ## HITS:1 COG:ZycaI_1 KEGG:ns NR:ns ## COG: ZycaI_1 COG0658 # Protein_GI_number: 15800774 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Escherichia coli O157:H7 EDL933 # 1 351 27 377 454 614 95.0 1e-176 MKITTVGVCIICGIFPLLILPQLPGTVTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWG ILAAKQILWAGETLTGATQDAIVEIIATDGMTTHYGQITHLQGRRIFPAPGLVLYGEYLP QAVCAGQVWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQY LASLQTTLQPYMWNAVILGLGIGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA GLIRGGQVFLPGCWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALAIWGMLKLSGRQ WSGWDVWICCLAAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQVAS >gi|296918681|gb|GG773019.1| GENE 77 82277 - 82561 167 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148826039|ref|YP_001290792.1| 50S ribosomal protein L35 [Haemophilus influenzae PittEE] # 1 89 4 91 96 68 38 1e-10 MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG >gi|296918681|gb|GG773019.1| GENE 78 82681 - 82779 150 32 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238903721|ref|ZP_04649193.1| ribosomal protein S1 [Escherichia coli BL21(DE3)] # 4 32 542 570 570 62 100 0.0 MQTSPTTQWLKLSKQLKASNSLTLRDFYSEVC >gi|296918681|gb|GG773019.1| GENE 79 82721 - 84394 2807 557 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15800772|ref|NP_286786.1| 30S ribosomal protein S1 [Escherichia coli O157:H7 EDL933] # 1 557 1 557 557 1085 100 0.0 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA NFSNNAMAEAFKAAKGE >gi|296918681|gb|GG773019.1| GENE 80 84505 - 85188 267 227 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 7 223 36 286 863 107 30 2e-22 MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDAL VPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAF RELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKE RDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKLALA >gi|296918681|gb|GG773019.1| GENE 81 85361 - 86134 777 257 aa, chain - ## HITS:1 COG:ECs0992 KEGG:ns NR:ns ## COG: ECs0992 COG0501 # Protein_GI_number: 15830246 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 257 6 262 262 444 97.0 1e-125 MIHMKNTKLLLAIATSAALLTGCQNTHGINTDLAISSGLNAYKAATLSDADAKAIANQGC VEMDSGNKVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGCVRVYS GLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLSRSQLG DIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFEKLASLDGGRTQSMFDSHP PSTERAQHIRDRIASGK >gi|296918681|gb|GG773019.1| GENE 82 86295 - 87578 1214 427 aa, chain - ## HITS:1 COG:ECs0991 KEGG:ns NR:ns ## COG: ECs0991 COG0128 # Protein_GI_number: 15830245 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 425 1 425 427 832 98.0 0 MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTAL GVSYTLSADRTRCEIIGNGGPLHAESARELFLGNAGTAMRPLAAALCLGSNDIVLTGEPR MKERPIGHLVDALRQGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTALLMTA PLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVE GDASSASYFLAAAAIRGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGE LNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVE EGHDFIRITPPEKLKFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQL ARISQPG >gi|296918681|gb|GG773019.1| GENE 83 87649 - 88737 1126 362 aa, chain - ## HITS:1 COG:ECs0990 KEGG:ns NR:ns ## COG: ECs0990 COG1932 # Protein_GI_number: 15830244 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Escherichia coli O157:H7 # 1 362 1 362 362 739 98.0 0 MAQIFNFSSGPAMLPAEVLEQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDL LNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFD AKVTVDGLRAVKPMSEWQLSDNAAYMHYCPNETIDGIAIDETPDFGKDVVVAADFSSTIL SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNT PPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNV PFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERR HG >gi|296918681|gb|GG773019.1| GENE 84 88936 - 89628 686 230 aa, chain - ## HITS:1 COG:ycaP KEGG:ns NR:ns ## COG: ycaP COG2323 # Protein_GI_number: 16128873 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 230 1 230 230 461 99.0 1e-130 MKAFDLHRIAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLG SAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAW SKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQISVYFFEDDKVKPGLLILPSDC TQRYKVVPESADYACIRCSEIIHMNAGEKQLCPRCANPEWTKASRAKRVT >gi|296918681|gb|GG773019.1| GENE 85 89758 - 91518 1898 586 aa, chain + ## HITS:1 COG:ycaO KEGG:ns NR:ns ## COG: ycaO COG1944 # Protein_GI_number: 16128872 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 586 4 589 589 1178 99.0 0 MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTIYIPMNIIGNLYVS NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE DFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWSFSGTTEEEFATLM AIFKKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ ALVWAEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK >gi|296918681|gb|GG773019.1| GENE 86 91924 - 92781 635 285 aa, chain + ## HITS:1 COG:ECs0987 KEGG:ns NR:ns ## COG: ECs0987 COG2116 # Protein_GI_number: 15830241 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli O157:H7 # 1 285 1 285 285 535 100.0 1e-152 MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTG TMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYFG NLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVW MSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFWTAVGSAPE NFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRENDHH >gi|296918681|gb|GG773019.1| GENE 87 92836 - 95118 2631 760 aa, chain + ## HITS:1 COG:pflB KEGG:ns NR:ns ## COG: pflB COG1882 # Protein_GI_number: 16128870 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 1 760 1 760 760 1565 100.0 0 MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATEATTTLWDKVME GVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQTEAPLKRALIPFGGIKMIE GSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAYGRGRIIG DYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTIRLREEIAEQHRALGQMKEMAAK YGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQ EAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFLNT LYTMGPSPEPNMTILWSEKLPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACC VSPMIVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNYDEVMERM DHFMDWLAKQYITALNIIHYMHDKYSYEASLMALHDRDVIRTMACGIAGLSVAADSLSAI KYAKVKPIRDEDGLAIDFEIEGEYPQFGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIP TQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYA KDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAM ENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM >gi|296918681|gb|GG773019.1| GENE 88 95310 - 96050 723 246 aa, chain + ## HITS:1 COG:ECs0985 KEGG:ns NR:ns ## COG: ECs0985 COG1180 # Protein_GI_number: 15830239 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 519 100.0 1e-147 MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEV VTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDEL LEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDS AHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQY GHKVMF >gi|296918681|gb|GG773019.1| GENE 89 96157 - 97305 980 382 aa, chain - ## HITS:1 COG:ECs0983 KEGG:ns NR:ns ## COG: ECs0983 COG0477 # Protein_GI_number: 15830237 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 637 99.0 0 MSTYTRPVMLLLSGLLLLTLAIAVLNTLVPLWLAQEHMSTWQVGVVSSSYFTGNLVGTLL TGYVIKRIGFNRSYYLASFIFAAGCAGLGLMIGFWSWLAWRFVAGIGCAMIWVVVESALM CSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSVLPWVTGLTLAGILPLLFTHV LNQQAENHDSTSITSMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHKGVSNASIGFW MAVLVSAGILGQWPIGRLADKFGRLLVLRVQVFVVILGSIAMLSQAAMAPALFILGAAGF TLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGSLLGPSFTAMLMQNFSDNLLFIMIASV SFIYLLMLLRNAGHTPKPVAHV >gi|296918681|gb|GG773019.1| GENE 90 97619 - 98245 613 208 aa, chain + ## HITS:1 COG:ECs0982 KEGG:ns NR:ns ## COG: ECs0982 COG1335 # Protein_GI_number: 15830236 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 430 100.0 1e-121 MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSF ETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVA FPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDI EGLATLFSNHIPDYRNLMTSYDTLTKQK >gi|296918681|gb|GG773019.1| GENE 91 98281 - 99144 868 287 aa, chain - ## HITS:1 COG:ECs0981 KEGG:ns NR:ns ## COG: ECs0981 COG3302 # Protein_GI_number: 15830235 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 432 98.0 1e-121 MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRVIACMLGLWVLMGIGFI ASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGWLLAMLKKLSPALRTLWLV VTMVLGVVFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLLLSLAGVDGWA MRLLPAISVLALVVSGVMSVMQGAELANIHSSVQQAAALVPDYGALMSWRIVLLAVALCL WIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYGLHMTVGMAVAS >gi|296918681|gb|GG773019.1| GENE 92 99146 - 99763 625 205 aa, chain - ## HITS:1 COG:dmsB KEGG:ns NR:ns ## COG: dmsB COG0437 # Protein_GI_number: 16128862 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 205 1 205 205 414 100.0 1e-116 MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAGGDWQEDNGVWHQNVFA YYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNETK GHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRKKHGDLAAVAPLPRAHFTKPN IVIKPNANSRPTGDTTGYLANPKEV >gi|296918681|gb|GG773019.1| GENE 93 99774 - 102218 2408 814 aa, chain - ## HITS:1 COG:dmsA KEGG:ns NR:ns ## COG: dmsA COG0243 # Protein_GI_number: 16128861 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 30 814 1 785 785 1626 99.0 0 MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSALTLPFSRIAHAVDSAIPTKSDEKVIW SACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYDGLHQVRACLRGRSMRRRVYNPDRL KYPMKRVGARGEGKFERISWEEAYDIIATKMQRLIKEYGNESIYLNYGTGTLGGTMTRSW PPGNTLVARLMNCCGGYLNHYGDYSSAQIAEGLNYTYGGWADGNSPSDIENSKLVVLFGN NPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALVNGL AYVMITENLVDQEFLDKYCVGYDEKTLPASAPKNGHYKAYILGEGPDGVAKTPEWASQIT GVPADKIIKLAREIGSTKPAFISQGWGPQRHANGEIATRAISMLAILTGNVGINGGNSGA REGSYSLPFVRMPTLENPIQTSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWN YAGNCLINQHSEINRTHEILQDDKKCELIVVIDCHMTSSAKYADILLPDCTASEQMDFAL DASCGNMSYVIFNDQVIKPRFECKTIYEMTSELAKRLGVEQQFTEGRTQEEWMRHLYAQS REAIPELPTFEEFRKQGIFKKRDPQGHHVAYKAFREDPQANPLTTPSGKIEIYSQALADI AATWELPEGDVIDPLPIYTPGFESYQDPLNKQYPLQLTGFHYKSRVHSTYGNVDVLKAAC RQEMWINPLDAQKRGINNGDKVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDTKR VDKGGCINVLTTQRPSPLAKGNPSHTNLVQVEKV >gi|296918681|gb|GG773019.1| GENE 94 102457 - 103749 1532 430 aa, chain - ## HITS:1 COG:ECs0978 KEGG:ns NR:ns ## COG: ECs0978 COG0172 # Protein_GI_number: 15830232 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 430 1 430 430 865 100.0 0 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ AKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDN VEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFM LDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEV PLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED SMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCS NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLR PYMNGLEYIG >gi|296918681|gb|GG773019.1| GENE 95 103840 - 105183 1053 447 aa, chain - ## HITS:1 COG:ECs0977 KEGG:ns NR:ns ## COG: ECs0977 COG2256 # Protein_GI_number: 15830231 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 866 99.0 0 MSNLSLDFSNNPFHPLAARMRPENLAQYIGQQHLLAVGKPLPRAIEAGHLHSMILWGPPG TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN RGLEGKIGEKLAWLAEQDQNSPIKRYR >gi|296918681|gb|GG773019.1| GENE 96 105194 - 105805 616 203 aa, chain - ## HITS:1 COG:ECs0976 KEGG:ns NR:ns ## COG: ECs0976 COG2834 # Protein_GI_number: 15830230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Escherichia coli O157:H7 # 1 203 2 204 204 378 100.0 1e-105 MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDL WVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSS DWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQN GAVDAAKFTFTPPQGVTVDDQRK >gi|296918681|gb|GG773019.1| GENE 97 105964 - 107685 1891 573 aa, chain - ## HITS:1 COG:ftsK KEGG:ns NR:ns ## COG: ftsK COG1674 # Protein_GI_number: 16128857 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Escherichia coli K12 # 61 573 817 1329 1329 960 99.0 0 QQQYQQPQQPVAPQPQYQQPQYQQPQQPVAQQPQYQQPQQPVAQQPQYQQPQQPVVSQPQ DTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFR IKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGL ELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSG KSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWC VNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYI VVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRI AFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKA RGRPQYVDGITSDSESEGGVGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYN RAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:10:31 2011 Seq name: gi|296918680|gb|GG773020.1| Escherichia coli MS 110-3 genomic scaffold Scfld302, whole genome shotgun sequence Length of sequence - 594 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 23 - 592 296 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) Predicted protein(s) >gi|296918680|gb|GG773020.1| GENE 1 23 - 592 296 189 aa, chain - ## HITS:1 COG:ECs1986_2 KEGG:ns NR:ns ## COG: ECs1986_2 COG0791 # Protein_GI_number: 15831240 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli O157:H7 # 46 186 1 141 144 266 87.0 2e-71 MQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHKFRCVPHLTGRRFEHGV TDCYTLFRDAYHLAGIEMPDFHREDDWWRNGQNLYLDNLEATGLYQVPLSAAQPGDVLLC CFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHREWHASAFTGICN DLAAASTFV Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:13:20 2011 Seq name: gi|296918679|gb|GG773021.1| Escherichia coli MS 110-3 genomic scaffold Scfld311, whole genome shotgun sequence Length of sequence - 479242 bp Number of predicted genes - 467, with homology - 464 Number of transcription units - 236, operones - 101 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . - CDS 577 - 1074 222 ## COG3772 Phage-related lysozyme (muraminidase) 3 1 Op 3 . - CDS 1074 - 1280 206 ## APECO1_513 phage lysis protein - Prom 1322 - 1381 2.6 + Prom 1646 - 1705 6.0 4 2 Tu 1 . + CDS 1878 - 2960 1049 ## COG3203 Outer membrane protein (porin) + Term 3099 - 3129 3.0 - Term 2965 - 3010 11.1 5 3 Op 1 . - CDS 3149 - 3532 317 ## ECS88_1182 antitermination protein Q homolog; DLP12 prophage - Prom 3560 - 3619 2.0 6 3 Op 2 . - CDS 3755 - 3982 225 ## COG4570 Holliday junction resolvase 7 4 Tu 1 . - CDS 4324 - 4665 171 ## ECS88_1180 hypothetical protein 8 5 Op 1 . - CDS 4841 - 5368 204 ## ECS88_1179 DNA N-6-adenine-methyltransferase from phage origin 9 5 Op 2 . - CDS 5365 - 5805 261 ## ECS88_1178 recombination protein NinB from phage origin - Term 5818 - 5852 4.1 10 6 Op 1 . - CDS 5879 - 6169 122 ## ECS88_1177 Ren protein from phage origin 11 6 Op 2 . - CDS 6166 - 6867 451 ## ECS88_1176 replication protein P of bacteriophage 12 6 Op 3 . - CDS 6864 - 7763 436 ## APECO1_233 putative replication protein O of bacteriophage 13 6 Op 4 . - CDS 7796 - 8092 135 ## ECS88_1173 regulatory protein CII from phage origin 14 7 Tu 1 . - CDS 8234 - 8449 68 ## c1547 hypothetical protein - Prom 8469 - 8528 8.1 + Prom 8434 - 8493 2.3 15 8 Tu 1 . + CDS 8567 - 9220 327 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 16 9 Tu 1 . + CDS 9817 - 10566 156 ## ECS88_1170 hypothetical protein + Term 10572 - 10601 1.1 17 10 Tu 1 . + CDS 11049 - 11321 86 ## APECO1_227 N protein + Term 11478 - 11513 -0.5 18 11 Tu 1 . - CDS 11338 - 11919 249 ## ECS88_1167 Superinfection exclusion protein B - Prom 12067 - 12126 2.1 + Prom 11780 - 11839 2.8 19 12 Op 1 . + CDS 12063 - 12149 93 ## 20 12 Op 2 . + CDS 12133 - 12333 151 ## ECS88_1165 restriction inhibitor protein ral (antirestriction protein) + Term 12468 - 12501 3.2 + Prom 12335 - 12394 2.0 21 13 Op 1 . + CDS 12516 - 12884 283 ## ECUMN_1391 putative single-stranded DNA binding protein of prophage + Term 12910 - 12937 -0.8 22 13 Op 2 . + CDS 12957 - 13121 101 ## G2583_0292 antitermination protein 23 13 Op 3 . + CDS 13090 - 13233 95 ## ECO26_3209 putative kil protein 24 13 Op 4 . + CDS 13309 - 13605 305 ## ECUMN_1389 Host-nuclease inhibitor protein gam from bacteriophage origin 25 13 Op 5 . + CDS 13611 - 14396 710 ## ECUMN_0583 recombination protein bet from phage origin 26 14 Tu 1 . + CDS 14549 - 15073 432 ## ECUMN_1387 exonuclease from phage origin + Prom 15700 - 15759 4.7 27 15 Op 1 . + CDS 15803 - 16024 89 ## COG1734 DnaK suppressor protein 28 15 Op 2 . + CDS 16024 - 16350 271 ## ECS88_1155 hypothetical protein 29 15 Op 3 . + CDS 16334 - 16573 154 ## ECS88_1154 hypothetical protein + Prom 16609 - 16668 3.8 30 16 Tu 1 . + CDS 16713 - 16949 137 ## ECUMN_1382 putative excisionase + Prom 17339 - 17398 3.8 31 17 Tu 1 . + CDS 17593 - 18081 53 ## COG0582 Integrase + Term 18151 - 18181 3.4 - Term 18134 - 18173 4.1 32 18 Tu 1 . - CDS 18195 - 19445 1471 ## COG0538 Isocitrate dehydrogenases - Prom 19560 - 19619 4.4 + Prom 19566 - 19625 6.5 33 19 Op 1 3/0.659 + CDS 19647 - 20270 482 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 34 19 Op 2 6/0.125 + CDS 20280 - 20741 424 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 35 19 Op 3 4/0.523 + CDS 20795 - 21901 1317 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 36 19 Op 4 9/0.000 + CDS 21937 - 22578 724 ## COG2915 Uncharacterized protein involved in purine metabolism 37 19 Op 5 4/0.523 + CDS 22582 - 23952 1667 ## COG0015 Adenylosuccinate lyase + Term 23962 - 24005 9.1 + Prom 24037 - 24096 5.9 38 20 Op 1 40/0.000 + CDS 24121 - 24792 803 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 39 20 Op 2 2/0.761 + CDS 24792 - 26252 1220 ## COG0642 Signal transduction histidine kinase 40 20 Op 3 . + CDS 26328 - 27449 1263 ## COG2850 Uncharacterized conserved protein + Term 27465 - 27502 9.1 41 21 Tu 1 . - CDS 27498 - 28724 1496 ## COG2195 Di- and tripeptidases - Prom 28831 - 28890 5.9 + Prom 28848 - 28907 4.0 42 22 Op 1 30/0.000 + CDS 28992 - 30110 1171 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 43 22 Op 2 36/0.000 + CDS 30124 - 30951 1049 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 44 22 Op 3 25/0.000 + CDS 30948 - 31742 858 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 45 22 Op 4 . + CDS 31739 - 32785 1519 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 32790 - 32832 6.1 46 23 Op 1 . + CDS 32843 - 33304 267 ## APECO1_203 putative inner membrane protein 47 23 Op 2 . + CDS 33301 - 34089 313 ## ECS88_1135 hypothetical protein 48 24 Op 1 5/0.273 - CDS 34227 - 35048 679 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 49 24 Op 2 5/0.273 - CDS 35064 - 35975 810 ## COG1940 Transcriptional regulator/sugar kinase 50 24 Op 3 23/0.000 - CDS 36004 - 37242 1311 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 51 24 Op 4 23/0.000 - CDS 37248 - 37949 227 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 52 24 Op 5 . - CDS 37942 - 39141 1355 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component - Prom 39331 - 39390 5.0 + Prom 39314 - 39373 3.9 53 25 Tu 1 . + CDS 39403 - 40476 954 ## COG4763 Predicted membrane protein + Prom 40480 - 40539 2.7 54 26 Tu 1 . + CDS 40604 - 44050 3765 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) + Prom 44116 - 44175 4.9 55 27 Tu 1 . + CDS 44198 - 45127 822 ## COG1376 Uncharacterized protein conserved in bacteria + Term 45198 - 45231 0.8 - Term 44923 - 44969 3.4 56 28 Tu 1 . - CDS 45219 - 45476 261 ## ECS88_1126 hypothetical protein - Prom 45585 - 45644 9.5 + Prom 45521 - 45580 10.0 57 29 Tu 1 . + CDS 45639 - 46349 444 ## COG1309 Transcriptional regulator + Term 46396 - 46432 -0.4 - Term 46348 - 46388 3.0 58 30 Tu 1 . - CDS 46411 - 46950 533 ## COG3134 Predicted outer membrane lipoprotein - Prom 46974 - 47033 2.1 - Term 47065 - 47110 3.9 59 31 Tu 1 . - CDS 47177 - 48481 1353 ## COG1252 NADH dehydrogenase, FAD-containing subunit - Prom 48521 - 48580 5.2 - Term 48819 - 48875 1.2 60 32 Op 1 2/0.761 - CDS 48902 - 49444 542 ## COG3150 Predicted esterase 61 32 Op 2 5/0.273 - CDS 49467 - 50492 988 ## COG1472 Beta-glucosidase-related glycosidases 62 32 Op 3 6/0.125 - CDS 50503 - 51327 270 ## COG0510 Predicted choline kinase involved in LPS biosynthesis 63 32 Op 4 6/0.125 - CDS 51308 - 51949 562 ## COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) 64 32 Op 5 4/0.523 - CDS 51963 - 52340 206 ## COG5633 Predicted periplasmic lipoprotein 65 32 Op 6 . - CDS 52343 - 52702 437 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - Prom 52921 - 52980 5.5 + Prom 52880 - 52939 4.2 66 33 Tu 1 . + CDS 53036 - 55225 2110 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid + Term 55243 - 55272 2.8 - Term 55230 - 55260 3.0 67 34 Tu 1 . - CDS 55285 - 56718 1641 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 56825 - 56884 4.3 68 35 Op 1 10/0.000 - CDS 57013 - 57810 748 ## COG0084 Mg-dependent DNase 69 35 Op 2 22/0.000 - CDS 57821 - 58825 724 ## COG0470 ATPase involved in DNA replication 70 35 Op 3 10/0.000 - CDS 58822 - 59463 705 ## COG0125 Thymidylate kinase 71 35 Op 4 6/0.125 - CDS 59453 - 60475 1130 ## COG1559 Predicted periplasmic solute-binding protein 72 35 Op 5 5/0.273 - CDS 60478 - 61287 535 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 61307 - 61366 2.9 - Term 61354 - 61381 -0.1 73 35 Op 6 27/0.000 - CDS 61407 - 62648 1204 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 62670 - 62729 62.3 74 36 Op 1 22/0.000 - CDS 62744 - 62980 420 ## COG0236 Acyl carrier protein - Prom 63019 - 63078 4.9 - Term 63136 - 63162 -0.6 75 36 Op 2 26/0.000 - CDS 63191 - 63925 252 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 76 36 Op 3 14/0.000 - CDS 63938 - 64867 942 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 77 36 Op 4 16/0.000 - CDS 64883 - 65836 935 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 78 36 Op 5 14/0.000 - CDS 65904 - 66944 554 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 79 36 Op 6 20/0.000 - CDS 67055 - 67228 292 ## PROTEIN SUPPORTED gi|15801206|ref|NP_287223.1| 50S ribosomal protein L32 80 36 Op 7 . - CDS 67280 - 67801 478 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein - Prom 67946 - 68005 5.4 + Prom 67776 - 67835 3.1 81 37 Tu 1 . + CDS 67961 - 68584 433 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 82 38 Tu 1 . - CDS 68696 - 69655 190 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit - Prom 69756 - 69815 3.6 83 39 Tu 1 . + CDS 70228 - 73413 3156 ## COG1530 Ribonucleases G and E + Term 73434 - 73465 3.2 - Term 73526 - 73566 10.3 84 40 Op 1 21/0.000 - CDS 73608 - 74561 1011 ## COG1344 Flagellin and related hook-associated proteins 85 40 Op 2 9/0.000 - CDS 74573 - 76216 1518 ## COG1256 Flagellar hook-associated protein 86 40 Op 3 7/0.080 - CDS 76282 - 77223 935 ## COG3951 Rod binding protein 87 40 Op 4 9/0.000 - CDS 77223 - 78320 825 ## COG1706 Flagellar basal-body P-ring protein 88 40 Op 5 . - CDS 78332 - 78544 198 ## COG2063 Flagellar basal body L-ring protein 89 40 Op 6 9/0.000 - CDS 78573 - 79061 438 ## COG2063 Flagellar basal body L-ring protein - Term 79070 - 79109 2.5 90 40 Op 7 8/0.011 - CDS 79114 - 79896 958 ## COG4786 Flagellar basal body rod protein - Prom 79944 - 80003 1.7 91 41 Op 1 8/0.011 - CDS 80068 - 80823 703 ## COG4787 Flagellar basal body rod protein 92 41 Op 2 16/0.000 - CDS 80843 - 82048 1244 ## COG1749 Flagellar hook protein FlgE 93 41 Op 3 9/0.000 - CDS 82073 - 82768 798 ## COG1843 Flagellar hook capping protein 94 41 Op 4 24/0.000 - CDS 82780 - 83184 315 ## COG1558 Flagellar basal body rod protein 95 41 Op 5 . - CDS 83188 - 83604 439 ## COG1815 Flagellar basal body protein + Prom 83677 - 83736 3.9 96 42 Op 1 8/0.011 + CDS 83759 - 84418 294 ## COG1261 Flagellar basal body P-ring biosynthesis protein 97 42 Op 2 7/0.080 + CDS 84494 - 84787 333 ## COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) 98 42 Op 3 . + CDS 84792 - 85208 449 ## COG3418 Flagellar biosynthesis/type III secretory pathway chaperone + Term 85213 - 85256 11.1 - Term 85200 - 85244 10.4 99 43 Tu 1 5/0.273 - CDS 85248 - 86783 1012 ## PROTEIN SUPPORTED gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 - Term 86802 - 86830 3.0 100 44 Op 1 4/0.523 - CDS 86893 - 87816 675 ## COG0673 Predicted dehydrogenases and related proteins 101 44 Op 2 5/0.273 - CDS 87818 - 88465 788 ## COG3132 Uncharacterized protein conserved in bacteria 102 44 Op 3 . - CDS 88476 - 89060 1063 ## PROTEIN SUPPORTED gi|15801183|ref|NP_287200.1| ribosomal-protein-S5-alanine N-acetyltransferase - Prom 89156 - 89215 5.5 + Prom 89208 - 89267 2.1 103 45 Op 1 1/0.886 + CDS 89296 - 90504 1282 ## COG0477 Permeases of the major facilitator superfamily 104 45 Op 2 . + CDS 90568 - 91215 665 ## COG2999 Glutaredoxin 2 + Term 91228 - 91267 8.0 105 46 Tu 1 . + CDS 91349 - 91909 635 ## APECO1_145 hypothetical protein + Term 91914 - 91945 3.2 + Prom 91919 - 91978 2.1 106 47 Op 1 . + CDS 92141 - 93061 739 ## COG0418 Dihydroorotase 107 47 Op 2 . + CDS 93135 - 93380 223 ## UTI89_C1186 DNA damage-inducible protein I + Term 93402 - 93429 1.5 + Prom 93409 - 93468 7.4 108 48 Tu 1 . + CDS 93670 - 93924 186 ## APECO1_142 biofilm formation regulatory protein BssS + Term 93949 - 93977 0.6 + Prom 93957 - 94016 2.2 109 49 Op 1 . + CDS 94039 - 95157 812 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 95167 - 95198 2.4 110 49 Op 2 . + CDS 95205 - 95318 139 ## + Term 95359 - 95399 -0.5 + Prom 95461 - 95520 5.3 111 50 Op 1 12/0.000 + CDS 95579 - 96145 306 ## COG3038 Cytochrome B561 112 50 Op 2 . + CDS 96149 - 96724 615 ## COG2353 Uncharacterized conserved protein + Term 96728 - 96780 8.2 - Term 96723 - 96759 6.5 113 51 Tu 1 . - CDS 96766 - 97818 855 ## COG1054 Predicted sulfurtransferase - Prom 97901 - 97960 7.0 + Prom 97858 - 97917 4.8 114 52 Tu 1 . + CDS 98043 - 98963 850 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 99046 - 99085 0.3 + Prom 99022 - 99081 2.5 115 53 Op 1 . + CDS 99135 - 100361 858 ## COG0477 Permeases of the major facilitator superfamily 116 53 Op 2 . + CDS 100444 - 100818 496 ## APECO1_135 hypothetical protein 117 54 Tu 1 . - CDS 100819 - 101046 251 ## COG5645 Predicted periplasmic lipoprotein - Prom 101121 - 101180 2.3 - Term 101055 - 101087 3.1 118 55 Op 1 7/0.080 - CDS 101218 - 103731 2278 ## COG2943 Membrane glycosyltransferase 119 55 Op 2 . - CDS 103754 - 105307 1501 ## COG3131 Periplasmic glucans biosynthesis protein - Prom 105347 - 105406 4.5 + Prom 105508 - 105567 1.8 120 56 Tu 1 . + CDS 105683 - 106840 698 ## ECS88_1059 glucans biosynthesis protein + Term 106895 - 106931 4.0 121 57 Op 1 2/0.761 - CDS 106848 - 108269 771 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 122 57 Op 2 . - CDS 108271 - 108804 351 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 - Prom 108827 - 108886 1.5 123 58 Tu 1 . - CDS 108899 - 109210 228 ## ECS88_1056 hypothetical protein 124 59 Tu 1 . - CDS 109331 - 109663 193 ## ECUMN_1217 putative autoagglutination protein - Term 109671 - 109699 1.0 125 60 Op 1 . - CDS 109722 - 110177 334 ## ECIAI39_2121 cryptic curlin major subunit 126 60 Op 2 . - CDS 110218 - 110700 261 ## EcSMS35_2090 curlin minor subunit - Prom 110738 - 110797 3.7 127 61 Tu 1 . - CDS 111312 - 111458 63 ## UTI89_C1162 hypothetical protein - Prom 111524 - 111583 3.9 128 62 Op 1 . + CDS 111426 - 112076 266 ## COG2771 DNA-binding HTH domain-containing proteins 129 62 Op 2 . + CDS 112081 - 112470 117 ## ECSP_1340 curli assembly protein CsgE 130 62 Op 3 . + CDS 112495 - 112911 378 ## ECIAI39_2125 curli assembly protein CsgF 131 62 Op 4 . + CDS 112938 - 113771 790 ## COG1462 Uncharacterized protein involved in formation of curli polymers + Term 113776 - 113820 7.1 - Term 113770 - 113803 3.4 132 63 Op 1 . - CDS 113836 - 114357 560 ## APECO1_121 hypothetical protein 133 63 Op 2 5/0.273 - CDS 114429 - 114983 679 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 134 63 Op 3 3/0.659 - CDS 115007 - 115744 698 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family 135 63 Op 4 . - CDS 115799 - 116737 531 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Term 116831 - 116886 1.2 136 64 Tu 1 . - CDS 117131 - 118498 307 ## COG2199 FOG: GGDEF domain - Prom 118519 - 118578 1.9 + Prom 118969 - 119028 4.4 137 65 Op 1 . + CDS 119086 - 121509 1599 ## UTI89_C1087 outer membrane protein PgaA 138 65 Op 2 6/0.125 + CDS 121518 - 123536 1020 ## COG0726 Predicted xylanase/chitin deacetylase + Term 123570 - 123607 1.5 + Prom 123548 - 123607 3.3 139 66 Tu 1 . + CDS 123649 - 124854 829 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis + Prom 124888 - 124947 3.8 140 67 Tu 1 . + CDS 124967 - 125269 171 ## ECH74115_1263 putative PGA biosynthesis protein + Term 125334 - 125381 0.8 - Term 125268 - 125304 6.3 141 68 Op 1 . - CDS 125319 - 126107 632 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 142 68 Op 2 . - CDS 126086 - 126382 56 ## gi|315291122|gb|EFU50485.1| hypothetical protein HMPREF9544_04463 - Prom 126482 - 126541 4.7 - Term 126656 - 126700 -0.1 143 69 Op 1 9/0.000 - CDS 126733 - 128004 1208 ## COG2837 Predicted iron-dependent peroxidase 144 69 Op 2 7/0.080 - CDS 128010 - 129137 1620 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 145 69 Op 3 1/0.886 - CDS 129195 - 130025 972 ## COG0672 High-affinity Fe2+/Pb2+ permease - Prom 130104 - 130163 2.6 - Term 130159 - 130200 10.0 146 70 Op 1 . - CDS 130245 - 131753 1648 ## COG0591 Na+/proline symporter - Prom 131847 - 131906 2.9 147 70 Op 2 . - CDS 131912 - 132121 85 ## UTI89_C1078 hypothetical protein - Prom 132277 - 132336 3.1 + Prom 132003 - 132062 7.7 148 71 Tu 1 . + CDS 132176 - 136138 4422 ## COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase + Term 136146 - 136186 6.2 - Term 136131 - 136174 2.0 149 72 Tu 1 . - CDS 136178 - 136816 609 ## COG1309 Transcriptional regulator - Prom 136944 - 137003 3.8 + Prom 136918 - 136977 5.1 150 73 Op 1 4/0.523 + CDS 137103 - 138194 912 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 151 73 Op 2 2/0.761 + CDS 138194 - 138886 720 ## COG1335 Amidases related to nicotinamidase 152 73 Op 3 5/0.273 + CDS 138898 - 139284 403 ## COG0251 Putative translation initiation inhibitor, yjgF family 153 73 Op 4 4/0.523 + CDS 139292 - 140092 716 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 154 73 Op 5 5/0.273 + CDS 140102 - 140692 454 ## COG0778 Nitroreductase 155 73 Op 6 1/0.886 + CDS 140703 - 141197 277 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 156 73 Op 7 2/0.761 + CDS 141218 - 141748 301 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 157 73 Op 8 . + CDS 141748 - 142440 433 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 142556 - 142588 -0.8 158 74 Tu 1 . - CDS 142568 - 142741 81 ## COG3729 General stress protein - Prom 142906 - 142965 4.7 + Prom 142885 - 142944 3.7 159 75 Tu 1 . + CDS 143114 - 143710 714 ## COG0655 Multimeric flavodoxin WrbA 160 76 Tu 1 . - CDS 143757 - 146219 1636 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 146271 - 146330 2.6 - Term 146254 - 146297 9.2 161 77 Tu 1 . - CDS 146354 - 146848 590 ## COG1522 Transcriptional regulators + Prom 147305 - 147364 5.8 162 78 Tu 1 . + CDS 147392 - 148357 725 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 148384 - 148428 8.0 + Prom 148385 - 148444 6.1 163 79 Op 1 14/0.000 + CDS 148480 - 150246 1494 ## COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components 164 79 Op 2 5/0.273 + CDS 150247 - 151968 1647 ## COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 165 79 Op 3 5/0.273 + CDS 152010 - 152714 389 ## COG2360 Leu/Phe-tRNA-protein transferase + Term 152903 - 152939 -1.0 + Prom 152904 - 152963 3.7 166 80 Tu 1 . + CDS 152999 - 153217 257 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 + Term 153251 - 153297 3.9 167 81 Tu 1 . - CDS 153371 - 153559 75 ## APECO1_1205 hypothetical protein - Prom 153716 - 153775 5.7 + TRNA 154061 - 154148 66.3 # Ser GGA 0 0 - Term 154204 - 154239 3.1 168 82 Op 1 . - CDS 154259 - 154813 440 ## ECS88_0911 hypothetical protein 169 82 Op 2 . - CDS 154824 - 155825 1066 ## ECS88_0910 hypothetical protein 170 82 Op 3 . - CDS 155836 - 156477 393 ## ECED1_0853 hypothetical protein 171 82 Op 4 . - CDS 156544 - 156759 263 ## ECED1_0853 hypothetical protein 172 82 Op 5 . - CDS 156756 - 158063 804 ## ECS88_0907 hypothetical protein - Prom 158253 - 158312 2.5 - Term 158298 - 158333 3.0 173 83 Op 1 2/0.761 - CDS 158393 - 161626 1296 ## COG1203 Predicted helicases 174 83 Op 2 . - CDS 161623 - 162606 785 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair - Prom 162686 - 162745 3.1 - Term 163194 - 163233 6.6 175 84 Op 1 19/0.000 - CDS 163259 - 165535 1361 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 176 84 Op 2 . - CDS 165566 - 165886 316 ## COG2127 Uncharacterized conserved protein - Prom 165952 - 166011 2.5 177 85 Tu 1 . - CDS 166056 - 166298 56 ## - Prom 166347 - 166406 2.2 + Prom 166062 - 166121 4.6 178 86 Tu 1 . + CDS 166209 - 166433 228 ## COG1278 Cold shock proteins - Term 166451 - 166496 2.1 179 87 Op 1 13/0.000 - CDS 166506 - 168452 368 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 180 87 Op 2 . - CDS 168449 - 169564 1240 ## COG0845 Membrane-fusion protein + Prom 169621 - 169680 4.2 181 88 Tu 1 . + CDS 169721 - 170671 652 ## COG2990 Uncharacterized protein conserved in bacteria 182 89 Tu 1 . - CDS 170668 - 172326 1138 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family - Prom 172497 - 172556 7.5 + Prom 172450 - 172509 8.3 183 90 Tu 1 . + CDS 172752 - 173447 751 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 173546 - 173607 14.4 184 91 Tu 1 . - CDS 173641 - 173790 62 ## ECS88_0896 hypothetical protein - Prom 173974 - 174033 2.5 + Prom 173473 - 173532 2.6 185 92 Tu 1 . + CDS 173768 - 174667 803 ## COG2431 Predicted membrane protein + Prom 174719 - 174778 4.0 186 93 Op 1 2/0.761 + CDS 174811 - 176463 2031 ## COG1151 6Fe-6S prismane cluster-containing protein 187 93 Op 2 5/0.273 + CDS 176475 - 177443 856 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Term 177453 - 177492 5.0 + Prom 177489 - 177548 6.2 188 94 Op 1 5/0.273 + CDS 177576 - 179294 1678 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 189 94 Op 2 4/0.523 + CDS 179331 - 180332 1159 ## COG2008 Threonine aldolase 190 94 Op 3 4/0.523 + CDS 180343 - 181773 1098 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Prom 181785 - 181844 3.0 191 94 Op 4 . + CDS 181872 - 182885 891 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Term 182708 - 182749 1.0 192 95 Op 1 4/0.523 - CDS 182882 - 183712 763 ## COG3023 Negative regulator of beta-lactamase expression 193 95 Op 2 . - CDS 183709 - 184032 476 ## COG0393 Uncharacterized conserved protein - Prom 184094 - 184153 6.7 + Prom 184041 - 184100 4.4 194 96 Tu 1 . + CDS 184158 - 184673 455 ## UTI89_C0868 putative lipoprotein + Term 184704 - 184744 5.6 + Prom 184689 - 184748 2.6 195 97 Op 1 7/0.080 + CDS 184819 - 185619 246 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 196 97 Op 2 12/0.000 + CDS 185637 - 186368 1063 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 197 97 Op 3 12/0.000 + CDS 186375 - 187091 878 ## COG4215 ABC-type arginine transport system, permease component 198 97 Op 4 4/0.523 + CDS 187091 - 187759 942 ## COG4160 ABC-type arginine/histidine transport system, permease component + Term 187833 - 187877 4.4 + Prom 187859 - 187918 12.2 199 98 Tu 1 . + CDS 187985 - 188716 865 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 188723 - 188756 3.8 - Term 188715 - 188740 -0.5 200 99 Op 1 . - CDS 188745 - 189872 1170 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 201 99 Op 2 . - CDS 189913 - 190401 403 ## ECO111_0927 putative inner membrane protein 202 99 Op 3 36/0.000 - CDS 190461 - 191306 718 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 203 99 Op 4 30/0.000 - CDS 191303 - 192256 962 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 204 99 Op 5 13/0.000 - CDS 192266 - 193399 1431 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 205 99 Op 6 . - CDS 193494 - 194606 1314 ## COG0687 Spermidine/putrescine-binding periplasmic protein - Prom 194773 - 194832 7.3 - Term 194893 - 194948 7.2 206 100 Op 1 . - CDS 194956 - 195432 434 ## EcE24377A_0925 TPR repeat-containing protein - Prom 195459 - 195518 1.6 207 100 Op 2 4/0.523 - CDS 195520 - 196422 1507 ## PROTEIN SUPPORTED gi|15830186|ref|NP_308959.1| ribosomal protein S6 modification protein 208 100 Op 3 . - CDS 196483 - 197205 703 ## COG0778 Nitroreductase 209 100 Op 4 . - CDS 197189 - 197476 173 ## ECO103_0894 hypothetical protein - Prom 197583 - 197642 4.8 + Prom 197553 - 197612 2.2 210 101 Tu 1 . + CDS 197636 - 197893 516 ## COG0695 Glutaredoxin and related proteins + Term 197905 - 197933 1.4 211 102 Tu 1 . - CDS 197923 - 198219 117 ## ECS88_0865 hypothetical protein - Prom 198408 - 198467 4.2 + Prom 198394 - 198453 6.2 212 103 Tu 1 . + CDS 198570 - 200255 1558 ## COG2985 Predicted permease + Term 200365 - 200419 0.4 213 104 Tu 1 . - CDS 200430 - 200966 491 ## COG3226 Uncharacterized protein conserved in bacteria - Prom 201028 - 201087 2.0 + Prom 200987 - 201046 2.8 214 105 Op 1 2/0.761 + CDS 201131 - 202258 1110 ## COG0477 Permeases of the major facilitator superfamily 215 105 Op 2 . + CDS 202258 - 203073 922 ## COG0561 Predicted hydrolases of the HAD superfamily 216 105 Op 3 . + CDS 203164 - 203424 218 ## ECS88_0860 hypothetical protein + Term 203430 - 203474 6.1 - Term 203421 - 203459 6.9 217 106 Tu 1 . - CDS 203465 - 204697 1232 ## COG0477 Permeases of the major facilitator superfamily - Prom 204800 - 204859 7.1 218 107 Op 1 4/0.523 + CDS 204982 - 205578 524 ## COG0671 Membrane-associated phospholipid phosphatase 219 107 Op 2 . + CDS 205636 - 206394 654 ## COG1349 Transcriptional regulators of sugar metabolism - Term 206393 - 206429 6.3 220 108 Tu 1 . - CDS 206441 - 207664 1239 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 207684 - 207743 5.1 + Prom 207643 - 207702 3.8 221 109 Tu 1 . + CDS 207890 - 208516 615 ## COG0625 Glutathione S-transferase + Term 208748 - 208782 1.5 222 110 Tu 1 . - CDS 208513 - 209484 773 ## COG2133 Glucose/sorbosone dehydrogenases - Prom 209649 - 209708 4.4 - Term 209695 - 209734 5.0 223 111 Tu 1 . - CDS 209739 - 210122 202 ## EcE24377A_0907 biofilm formation regulatory protein BssR - Prom 210216 - 210275 3.9 + Prom 210241 - 210300 4.9 224 112 Tu 1 . + CDS 210335 - 211660 1840 ## PROTEIN SUPPORTED gi|183179613|ref|ZP_02957824.1| conserved hypothetical protein - Term 211653 - 211696 7.7 225 113 Op 1 6/0.125 - CDS 211707 - 213035 993 ## COG2199 FOG: GGDEF domain 226 113 Op 2 3/0.659 - CDS 213043 - 215340 1504 ## COG2200 FOG: EAL domain - Prom 215470 - 215529 5.6 - Term 215459 - 215493 -1.0 227 114 Op 1 49/0.000 - CDS 215568 - 216479 779 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 228 114 Op 2 38/0.000 - CDS 216482 - 217402 919 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 229 114 Op 3 3/0.659 - CDS 217420 - 217629 288 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 217746 - 217805 74.5 - Term 217681 - 217720 -0.5 230 115 Op 1 11/0.000 - CDS 217807 - 218970 1220 ## COG0747 ABC-type dipeptide transport system, periplasmic component 231 115 Op 2 3/0.659 - CDS 218990 - 220861 838 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 232 115 Op 3 . - CDS 220848 - 221813 1085 ## COG1446 Asparaginase - Prom 221881 - 221940 6.8 + Prom 221821 - 221880 2.9 233 116 Op 1 9/0.000 + CDS 222017 - 223252 1184 ## COG0303 Molybdopterin biosynthesis enzyme 234 116 Op 2 . + CDS 223252 - 224001 824 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 - Term 224012 - 224044 3.8 235 117 Tu 1 . - CDS 224077 - 224745 821 ## COG0176 Transaldolase - Prom 224830 - 224889 3.3 + Prom 224726 - 224785 3.6 236 118 Op 1 11/0.000 + CDS 224870 - 225769 899 ## COG1180 Pyruvate-formate lyase-activating enzyme 237 118 Op 2 2/0.761 + CDS 225775 - 228207 2851 ## COG1882 Pyruvate-formate lyase + Prom 228236 - 228295 3.2 238 119 Tu 1 . + CDS 228353 - 229168 902 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 229286 - 229337 -0.2 - Term 229100 - 229135 2.5 239 120 Tu 1 . - CDS 229368 - 230960 1940 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 231079 - 231138 4.1 + Prom 231064 - 231123 4.9 240 121 Tu 1 . + CDS 231179 - 232099 1051 ## COG1376 Uncharacterized protein conserved in bacteria + Term 232120 - 232150 0.2 - Term 232108 - 232138 2.7 241 122 Op 1 4/0.523 - CDS 232157 - 233275 999 ## COG0471 Di- and tricarboxylate transporters 242 122 Op 2 . - CDS 233272 - 233739 561 ## COG1321 Mn-dependent transcriptional regulator - Prom 233785 - 233844 4.1 + Prom 233798 - 233857 3.9 243 123 Op 1 . + CDS 233925 - 234053 65 ## SbBS512_E2532 hypothetical protein + Prom 234150 - 234209 2.2 244 123 Op 2 . + CDS 234325 - 235908 1453 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase + Term 235944 - 235976 6.1 - Term 235924 - 235976 7.6 245 124 Tu 1 . - CDS 235987 - 236502 518 ## COG3637 Opacity protein and related surface antigens - Prom 236528 - 236587 4.0 246 125 Tu 1 . + CDS 236855 - 237742 792 ## COG5006 Predicted permease, DMT superfamily + Term 237752 - 237791 8.6 + Prom 237861 - 237920 6.4 247 126 Tu 1 . + CDS 238041 - 238544 605 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) + Term 238580 - 238623 9.5 + Prom 238842 - 238901 4.1 248 127 Op 1 31/0.000 + CDS 238948 - 239694 975 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 249 127 Op 2 34/0.000 + CDS 239876 - 240535 932 ## COG0765 ABC-type amino acid transport system, permease component 250 127 Op 3 3/0.659 + CDS 240532 - 241254 594 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 241284 - 241343 5.1 251 128 Tu 1 . + CDS 241371 - 243596 1970 ## COG0668 Small-conductance mechanosensitive channel 252 129 Tu 1 . - CDS 243593 - 244519 793 ## COG3129 Predicted SAM-dependent methyltransferase - Prom 244681 - 244740 3.3 + Prom 244632 - 244691 7.2 253 130 Tu 1 . + CDS 244795 - 245055 234 ## ECIAI39_0784 hypothetical protein + Term 245070 - 245103 2.2 + Prom 245144 - 245203 3.2 254 131 Tu 1 . + CDS 245320 - 247602 1966 ## COG4774 Outer membrane receptor for monomeric catechols + Term 247786 - 247811 -0.5 255 132 Op 1 1/0.886 + CDS 247818 - 248495 702 ## COG3128 Uncharacterized iron-regulated protein 256 132 Op 2 . + CDS 248569 - 248835 274 ## COG1734 DnaK suppressor protein 257 133 Tu 1 . + CDS 249100 - 249360 323 ## ECO103_0838 hypothetical protein + Term 249561 - 249594 5.2 - Term 249431 - 249464 -0.4 258 134 Tu 1 . - CDS 249588 - 250673 1384 ## COG2055 Malate/L-lactate dehydrogenases - Prom 250706 - 250765 2.3 - Term 250768 - 250801 3.0 259 135 Op 1 4/0.523 - CDS 250814 - 251776 1038 ## COG0547 Anthranilate phosphoribosyltransferase 260 135 Op 2 . - CDS 251804 - 253954 1937 ## COG1199 Rad3-related DNA helicases - Prom 253981 - 254040 2.5 + Prom 253927 - 253986 2.6 261 136 Tu 1 . + CDS 254064 - 254258 113 ## COG3236 Uncharacterized protein conserved in bacteria 262 137 Tu 1 . - CDS 254566 - 255894 1421 ## COG0513 Superfamily II DNA and RNA helicases - Prom 256013 - 256072 2.9 + Prom 256035 - 256094 3.3 263 138 Op 1 15/0.000 + CDS 256123 - 256794 719 ## COG1309 Transcriptional regulator 264 138 Op 2 10/0.000 + CDS 256797 - 257792 1288 ## COG0845 Membrane-fusion protein 265 138 Op 3 45/0.000 + CDS 257785 - 259521 343 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 266 138 Op 4 22/0.000 + CDS 259514 - 260647 1375 ## COG0842 ABC-type multidrug transport system, permease component 267 138 Op 5 . + CDS 260658 - 261764 1039 ## COG0842 ABC-type multidrug transport system, permease component 268 139 Tu 1 . - CDS 261726 - 262136 506 ## ECS88_0809 hypothetical protein - Prom 262175 - 262234 3.5 + Prom 262103 - 262162 1.5 269 140 Op 1 8/0.011 + CDS 262269 - 263030 608 ## COG3568 Metal-dependent hydrolase 270 140 Op 2 5/0.273 + CDS 263027 - 264268 1191 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 271 140 Op 3 . + CDS 264268 - 265224 1099 ## COG0392 Predicted integral membrane protein 272 141 Tu 1 5/0.273 - CDS 265260 - 265973 170 ## COG0670 Integral membrane protein, interacts with FtsH - Prom 266086 - 266145 4.0 - Term 266129 - 266159 1.0 273 142 Tu 1 5/0.273 - CDS 266179 - 266883 759 ## COG0670 Integral membrane protein, interacts with FtsH - Prom 266909 - 266968 1.9 274 143 Op 1 21/0.000 - CDS 267020 - 267472 629 ## COG0314 Molybdopterin converting factor, large subunit 275 143 Op 2 11/0.000 - CDS 267474 - 267719 275 ## COG1977 Molybdopterin converting factor, small subunit 276 143 Op 3 11/0.000 - CDS 267712 - 268197 676 ## COG0315 Molybdenum cofactor biosynthesis enzyme 277 143 Op 4 6/0.125 - CDS 268200 - 268712 618 ## COG0521 Molybdopterin biosynthesis enzymes 278 143 Op 5 . - CDS 268734 - 269723 638 ## COG2896 Molybdenum cofactor biosynthesis enzyme - Prom 269873 - 269932 4.2 + Prom 269908 - 269967 3.7 279 144 Tu 1 . + CDS 270120 - 271028 891 ## COG0391 Uncharacterized conserved protein + Term 271031 - 271071 8.9 - Term 271019 - 271057 8.5 280 145 Tu 1 . - CDS 271066 - 273087 2218 ## COG0556 Helicase subunit of the DNA excision repair complex - Prom 273138 - 273197 6.9 - Term 273467 - 273509 1.1 281 146 Op 1 9/0.000 - CDS 273666 - 274343 471 ## COG0132 Dethiobiotin synthetase 282 146 Op 2 6/0.125 - CDS 274336 - 275091 581 ## COG0500 SAM-dependent methyltransferases 283 146 Op 3 12/0.000 - CDS 275078 - 276232 944 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 284 146 Op 4 . - CDS 276229 - 277269 1185 ## COG0502 Biotin synthase and related enzymes - Prom 277313 - 277372 3.2 + Prom 277263 - 277322 3.2 285 147 Op 1 4/0.523 + CDS 277413 - 278645 1203 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 286 147 Op 2 1/0.886 + CDS 278704 - 279180 478 ## COG1881 Phospholipid-binding protein + Prom 279225 - 279284 3.5 287 148 Tu 1 . + CDS 279332 - 280615 1353 ## COG4677 Pectin methylesterase - Term 280684 - 280740 10.2 288 149 Tu 1 . - CDS 280756 - 283017 2144 ## COG1048 Aconitase A - Prom 283053 - 283112 4.7 289 150 Op 1 . - CDS 283200 - 283685 506 ## COG0471 Di- and tricarboxylate transporters 290 150 Op 2 3/0.659 - CDS 283692 - 284633 1029 ## COG0471 Di- and tricarboxylate transporters 291 150 Op 3 . - CDS 284709 - 285761 794 ## COG2828 Uncharacterized protein conserved in bacteria - Prom 285781 - 285840 3.0 + Prom 285842 - 285901 6.6 292 151 Tu 1 . + CDS 286065 - 286898 537 ## COG0583 Transcriptional regulator + Term 287014 - 287060 5.0 - Term 286891 - 286926 6.4 293 152 Tu 1 . - CDS 286939 - 287934 999 ## COG2706 3-carboxymuconate cyclase + Prom 287925 - 287984 6.0 294 153 Tu 1 . + CDS 288089 - 288907 879 ## COG0561 Predicted hydrolases of the HAD superfamily 295 154 Op 1 13/0.000 - CDS 288908 - 289966 1175 ## COG4148 ABC-type molybdate transport system, ATPase component 296 154 Op 2 23/0.000 - CDS 289969 - 290658 599 ## COG4149 ABC-type molybdate transport system, permease component 297 154 Op 3 . - CDS 290658 - 291431 825 ## COG0725 ABC-type molybdate transport system, periplasmic component - Prom 291523 - 291582 5.3 - Term 291556 - 291591 4.5 298 155 Tu 1 . - CDS 291598 - 291747 131 ## ECSE_0815 hypothetical protein - Prom 291769 - 291828 6.1 + Prom 291695 - 291754 3.0 299 156 Op 1 4/0.523 + CDS 291876 - 292664 814 ## COG2005 N-terminal domain of molybdenum-binding protein 300 156 Op 2 . + CDS 292732 - 294204 178 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Prom 294286 - 294345 8.1 301 157 Op 1 3/0.659 + CDS 294467 - 295483 1026 ## COG1087 UDP-glucose 4-epimerase 302 157 Op 2 8/0.011 + CDS 295493 - 296539 769 ## COG1085 Galactose-1-phosphate uridylyltransferase 303 157 Op 3 6/0.125 + CDS 296543 - 297691 1118 ## COG0153 Galactokinase 304 157 Op 4 4/0.523 + CDS 297685 - 298725 1155 ## COG2017 Galactose mutarotase and related enzymes + Term 298729 - 298764 2.2 + Prom 298834 - 298893 4.1 305 158 Tu 1 . + CDS 298928 - 299680 1196 ## COG0588 Phosphoglycerate mutase 1 + Term 299699 - 299746 10.1 - Term 299694 - 299727 2.8 306 159 Tu 1 . - CDS 299847 - 300899 1039 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 300940 - 300999 6.1 307 160 Tu 1 . + CDS 301215 - 301595 363 ## ECS88_0769 hypothetical protein + Term 301617 - 301650 2.1 + Prom 301626 - 301685 6.2 308 161 Tu 1 . + CDS 301709 - 302650 846 ## COG1230 Co/Zn/Cd efflux system component + Term 302659 - 302695 4.7 309 162 Op 1 5/0.273 - CDS 302647 - 303351 611 ## COG3201 Nicotinamide mononucleotide transporter 310 162 Op 2 6/0.125 - CDS 303404 - 304447 647 ## COG0379 Quinolinate synthase - Prom 304679 - 304738 5.9 - TRNA 304804 - 304879 99.5 # Lys TTT 0 0 - TRNA 304913 - 304988 99.5 # Lys TTT 0 0 - TRNA 304991 - 305066 94.3 # Val TAC 0 0 - TRNA 305361 - 305436 99.5 # Lys TTT 0 0 311 163 Op 1 13/0.000 - CDS 305601 - 306131 365 ## COG1729 Uncharacterized protein conserved in bacteria - Prom 306320 - 306379 32.7 312 163 Op 2 20/0.000 - CDS 306412 - 306933 709 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 313 163 Op 3 8/0.011 - CDS 306968 - 308260 1257 ## COG0823 Periplasmic component of the Tol biopolymer transport system - Prom 308312 - 308371 4.0 314 164 Tu 1 . - CDS 308393 - 309586 1193 ## COG3064 Membrane protein involved in colicin uptake 315 165 Op 1 30/0.000 - CDS 309708 - 310136 462 ## COG0848 Biopolymer transport protein 316 165 Op 2 13/0.000 - CDS 310140 - 310823 707 ## COG0811 Biopolymer transport proteins 317 165 Op 3 7/0.080 - CDS 310829 - 311119 182 ## COG0824 Predicted thioesterase - Prom 311274 - 311333 3.2 - Term 311323 - 311362 7.1 318 166 Op 1 2/0.761 - CDS 311383 - 311676 223 ## COG3790 Predicted membrane protein 319 166 Op 2 3/0.659 - CDS 311676 - 311789 135 ## COG4890 Predicted outer membrane lipoprotein 320 166 Op 3 31/0.000 - CDS 311804 - 312943 1476 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 321 166 Op 4 . - CDS 312959 - 314527 1865 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 - Prom 314649 - 314708 6.8 322 167 Tu 1 . - CDS 315857 - 316882 611 ## ECS88_0755 hypothetical protein - Prom 316954 - 317013 5.4 - Term 317107 - 317136 2.1 323 168 Op 1 39/0.000 - CDS 317212 - 318081 966 ## COG0074 Succinyl-CoA synthetase, alpha subunit 324 168 Op 2 6/0.125 - CDS 318081 - 319247 1458 ## COG0045 Succinyl-CoA synthetase, beta subunit 325 168 Op 3 21/0.000 - CDS 319341 - 320558 1672 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 326 168 Op 4 5/0.273 - CDS 320573 - 323374 2708 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes - Prom 323615 - 323674 3.8 327 169 Op 1 36/0.000 - CDS 323735 - 324451 672 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 328 169 Op 2 22/0.000 - CDS 324467 - 326233 2089 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 329 169 Op 3 24/0.000 - CDS 326233 - 326580 487 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 330 169 Op 4 . - CDS 326574 - 326978 237 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit - Prom 327185 - 327244 5.5 + Prom 327184 - 327243 4.7 331 170 Tu 1 . + CDS 327359 - 327466 59 ## EC55989_0704 hypothetical protein 332 171 Tu 1 . - CDS 327499 - 327684 120 ## ECP_0732 hypothetical protein - Prom 327903 - 327962 2.9 + Prom 327580 - 327639 2.8 333 172 Tu 1 . + CDS 327672 - 328955 1498 ## COG0372 Citrate synthase + Term 328984 - 329022 5.1 + Prom 328992 - 329051 6.6 334 173 Op 1 . + CDS 329103 - 329477 288 ## JW5098 predicted fimbrial-like adhesin protein + Term 329486 - 329526 -0.8 + Prom 329511 - 329570 4.9 335 173 Op 2 . + CDS 329629 - 330675 916 ## COG3180 Putative ammonia monooxygenase + Term 330863 - 330908 1.7 336 174 Op 1 3/0.659 - CDS 330672 - 331463 647 ## COG0266 Formamidopyrimidine-DNA glycosylase 337 174 Op 2 8/0.011 - CDS 331499 - 332233 599 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 338 174 Op 3 21/0.000 - CDS 332223 - 333155 969 ## COG1984 Allophanate hydrolase subunit 2 339 174 Op 4 4/0.523 - CDS 333149 - 333805 546 ## COG2049 Allophanate hydrolase subunit 1 340 174 Op 5 . - CDS 333828 - 334571 876 ## COG0327 Uncharacterized conserved protein - Prom 334645 - 334704 2.6 + Prom 334670 - 334729 3.0 341 175 Tu 1 . + CDS 334842 - 336323 1773 ## COG3104 Dipeptide/tripeptide permease + Term 336338 - 336383 12.6 342 176 Op 1 5/0.273 - CDS 336365 - 337783 929 ## COG0415 Deoxyribodipyrimidine photolyase 343 176 Op 2 . - CDS 337780 - 338289 314 ## COG3272 Uncharacterized conserved protein - Prom 338311 - 338370 21.1 - Term 338356 - 338390 4.5 344 177 Tu 1 . - CDS 338417 - 338623 245 ## ECS88_0734 hypothetical protein - Prom 338794 - 338853 8.9 + Prom 338619 - 338678 4.8 345 178 Op 1 . + CDS 338822 - 339025 88 ## ECS88_0733 potassium ion accessory transporter subunit 346 178 Op 2 20/0.000 + CDS 339025 - 340698 1910 ## COG2060 K+-transporting ATPase, A chain 347 178 Op 3 18/0.000 + CDS 340721 - 342769 2335 ## COG2216 High-affinity K+ transport system, ATPase chain B 348 178 Op 4 15/0.000 + CDS 342778 - 343350 486 ## COG2156 K+-transporting ATPase, c chain 349 178 Op 5 16/0.000 + CDS 343343 - 346027 2240 ## COG2205 Osmosensitive K+ channel histidine kinase 350 178 Op 6 . + CDS 346099 - 346701 660 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 346745 - 346795 4.1 - Term 346927 - 346971 0.6 351 179 Tu 1 . - CDS 346994 - 347131 75 ## EFER_2417 hypothetical protein + Prom 347117 - 347176 3.7 352 180 Op 1 10/0.000 + CDS 347390 - 349588 1947 ## COG1982 Arginine/lysine/ornithine decarboxylases 353 180 Op 2 . + CDS 349585 - 350904 1614 ## COG0531 Amino acid transporters + Term 350914 - 350959 1.2 - Term 350904 - 350947 10.1 354 181 Op 1 6/0.125 - CDS 350961 - 352601 1936 ## COG0033 Phosphoglucomutase 355 181 Op 2 . - CDS 352627 - 353172 456 ## COG3057 Negative regulator of replication initiationR - Prom 353309 - 353368 4.4 + Prom 353265 - 353324 2.4 356 182 Op 1 . + CDS 353357 - 354121 726 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 357 182 Op 2 . + CDS 354192 - 354554 418 ## ECP_0706 LexA regulated protein; Provisional; region: PRK11675 + Prom 354578 - 354637 2.9 358 183 Tu 1 . + CDS 354694 - 355224 782 ## COG0716 Flavodoxins + Term 355230 - 355269 9.1 + Prom 355383 - 355442 7.0 359 184 Tu 1 . + CDS 355513 - 355959 429 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 355996 - 356033 3.0 - Term 356033 - 356064 0.1 360 185 Op 1 . - CDS 356065 - 356391 429 ## ECP_0702 lipoprotein YbfN precursor 361 185 Op 2 . - CDS 356441 - 357847 1625 ## ECS88_0717 outer membrane porin - Term 358197 - 358225 2.1 362 186 Tu 1 . - CDS 358296 - 359960 2038 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 359995 - 360054 4.2 363 187 Op 1 1/0.886 - CDS 360180 - 360911 551 ## COG1349 Transcriptional regulators of sugar metabolism 364 187 Op 2 . - CDS 360943 - 361353 294 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 365 187 Op 3 3/0.659 - CDS 361302 - 361928 169 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 366 187 Op 4 . - CDS 361921 - 363156 678 ## COG3395 Uncharacterized protein conserved in bacteria - Prom 363242 - 363301 7.2 + Prom 363143 - 363202 5.8 367 188 Op 1 . + CDS 363326 - 364483 759 ## COG1454 Alcohol dehydrogenase, class IV 368 188 Op 2 . + CDS 364487 - 365374 807 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 369 188 Op 3 1/0.886 + CDS 365434 - 365727 298 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 370 189 Op 1 . + CDS 365835 - 366155 220 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 371 189 Op 2 . + CDS 366220 - 367389 863 ## COG4692 Predicted neuraminidase (sialidase) 372 189 Op 3 . + CDS 367386 - 367856 187 ## COG2731 Beta-galactosidase, beta subunit 373 189 Op 4 . + CDS 367870 - 369150 1142 ## COG0471 Di- and tricarboxylate transporters + Term 369166 - 369201 3.1 - Term 369152 - 369188 7.1 374 190 Tu 1 . - CDS 369273 - 371219 2079 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Prom 371253 - 371312 5.4 375 191 Op 1 12/0.000 + CDS 371552 - 372352 985 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 372363 - 372398 4.1 376 191 Op 2 7/0.080 + CDS 372412 - 373560 1298 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 377 191 Op 3 5/0.273 + CDS 373569 - 374789 261 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 378 191 Op 4 5/0.273 + CDS 374837 - 375589 831 ## COG0647 Predicted sugar phosphatases of the HAD superfamily + Term 375593 - 375631 4.2 + Prom 375723 - 375782 7.1 379 192 Tu 1 . + CDS 375845 - 377509 1841 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) + Term 377521 - 377556 7.4 + TRNA 377890 - 377966 96.2 # Met CAT 0 0 + TRNA 377977 - 378061 78.3 # Leu TAG 0 0 + TRNA 378224 - 378298 74.3 # Gln TTG 0 0 + TRNA 378314 - 378390 96.2 # Met CAT 0 0 + TRNA 378439 - 378513 75.8 # Gln CTG 0 0 + TRNA 378551 - 378625 75.8 # Gln CTG 0 0 - Term 378703 - 378744 1.9 380 193 Tu 1 . - CDS 378780 - 379955 1085 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Prom 380006 - 380065 3.1 + Prom 379930 - 379989 2.1 381 194 Op 1 10/0.000 + CDS 380101 - 381525 435 ## PROTEIN SUPPORTED gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase + Term 381532 - 381564 6.1 + Prom 381568 - 381627 2.2 382 194 Op 2 17/0.000 + CDS 381678 - 382718 1345 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 383 194 Op 3 11/0.000 + CDS 382715 - 383182 705 ## COG0319 Predicted metal-dependent hydrolase + Term 383213 - 383248 2.4 384 194 Op 4 9/0.000 + CDS 383272 - 384150 1043 ## COG4535 Putative Mg2+ and Co2+ transporter CorC 385 194 Op 5 . + CDS 384175 - 385716 1882 ## COG0815 Apolipoprotein N-acyltransferase + Term 385816 - 385848 4.0 - Term 385581 - 385644 3.1 386 195 Tu 1 . - CDS 385843 - 387720 907 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) - Prom 387749 - 387808 2.8 + Prom 388042 - 388101 4.1 387 196 Tu 1 31/0.000 + CDS 388174 - 389082 1187 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Prom 389204 - 389263 36.3 388 197 Op 1 17/0.000 + CDS 389313 - 390053 816 ## COG0765 ABC-type amino acid transport system, permease component 389 197 Op 2 34/0.000 + CDS 390053 - 390727 702 ## COG0765 ABC-type amino acid transport system, permease component 390 197 Op 3 4/0.523 + CDS 390727 - 391452 553 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 391 198 Tu 1 . + CDS 391570 - 392505 1035 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Term 392510 - 392554 1.2 392 199 Tu 1 . - CDS 392550 - 393032 448 ## ECSP_0696 hypothetical protein - Prom 393114 - 393173 3.1 + Prom 393014 - 393073 3.9 393 200 Op 1 9/0.000 + CDS 393126 - 395849 3004 ## COG0495 Leucyl-tRNA synthetase 394 200 Op 2 12/0.000 + CDS 395960 - 396445 557 ## COG2980 Rare lipoprotein B + Prom 396484 - 396543 4.8 395 200 Op 3 7/0.080 + CDS 396564 - 397505 733 ## COG1466 DNA polymerase III, delta subunit 396 200 Op 4 3/0.659 + CDS 397507 - 398148 534 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 397 200 Op 5 6/0.125 + CDS 398172 - 398783 397 ## COG0406 Fructose-2,6-bisphosphatase + Prom 398948 - 399007 4.7 398 201 Op 1 14/0.000 + CDS 399043 - 399360 345 ## COG0799 Uncharacterized homolog of plant Iojap protein 399 201 Op 2 9/0.000 + CDS 399364 - 399831 539 ## COG1576 Uncharacterized conserved protein 400 201 Op 3 19/0.000 + CDS 399862 - 401763 2042 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 401 201 Op 4 8/0.011 + CDS 401766 - 402878 1108 ## COG0772 Bacterial cell division membrane protein 402 201 Op 5 12/0.000 + CDS 402889 - 403977 827 ## COG0797 Lipoproteins + Term 404057 - 404091 1.3 + Prom 404020 - 404079 5.0 403 201 Op 6 9/0.000 + CDS 404117 - 405328 1313 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 405386 - 405417 4.8 + Prom 405332 - 405391 2.3 404 201 Op 7 6/0.125 + CDS 405438 - 405701 335 ## COG2921 Uncharacterized conserved protein + Prom 405710 - 405769 3.9 405 202 Tu 1 . + CDS 405802 - 406443 542 ## COG0321 Lipoate-protein ligase B + Term 406457 - 406490 -0.3 + Prom 407045 - 407104 4.8 406 203 Tu 1 . + CDS 407263 - 408228 991 ## COG0320 Lipoate synthase + Term 408285 - 408355 12.2 - Term 408253 - 408282 0.5 407 204 Tu 1 . - CDS 408390 - 408599 178 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 - Prom 408640 - 408699 3.7 408 205 Tu 1 . - CDS 408722 - 409510 880 ## COG0388 Predicted amidohydrolase - Prom 409546 - 409605 2.3 + Prom 409488 - 409547 4.5 409 206 Tu 1 . + CDS 409606 - 409989 222 ## COG0239 Integral membrane protein possibly involved in chromosome condensation + Term 410015 - 410054 8.0 410 207 Tu 1 . - CDS 410060 - 410269 317 ## COG1278 Cold shock proteins - Prom 410383 - 410442 6.6 - Term 410283 - 410311 -0.0 411 208 Tu 1 . - CDS 410444 - 411004 453 ## ECS88_0664 palmitoyl transferase + Prom 411508 - 411567 7.6 412 209 Tu 1 . + CDS 411591 - 412976 1386 ## COG3069 C4-dicarboxylate transporter + Term 412985 - 413019 5.2 - Term 412967 - 413011 5.1 413 210 Op 1 9/0.000 - CDS 413017 - 413697 263 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 414 210 Op 2 . - CDS 413666 - 415324 1505 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism - Prom 415376 - 415435 5.3 + Prom 415488 - 415547 7.4 415 211 Op 1 5/0.273 + CDS 415703 - 416761 877 ## COG3053 Citrate lyase synthetase 416 211 Op 2 6/0.125 + CDS 416776 - 417072 306 ## COG3052 Citrate lyase, gamma subunit 417 211 Op 3 6/0.125 + CDS 417069 - 417977 1162 ## COG2301 Citrate lyase beta subunit 418 211 Op 4 7/0.080 + CDS 417988 - 419520 1777 ## COG3051 Citrate lyase, alpha subunit 419 211 Op 5 5/0.273 + CDS 419524 - 420075 311 ## COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) 420 211 Op 6 5/0.273 + CDS 420050 - 420928 574 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase 421 211 Op 7 4/0.523 + CDS 420979 - 422442 1714 ## COG0471 Di- and tricarboxylate transporters + Term 422471 - 422524 17.6 + Prom 422472 - 422531 28.0 422 212 Op 1 . + CDS 422551 - 423375 493 ## COG3719 Ribonuclease I + Term 423525 - 423559 5.0 + Prom 423459 - 423518 3.7 423 212 Op 2 . + CDS 423605 - 424015 421 ## COG0782 Transcription elongation factor + Term 424050 - 424081 3.4 + Prom 424243 - 424302 4.1 424 213 Tu 1 . + CDS 424371 - 424799 443 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 424819 - 424858 1.3 - Term 424854 - 424889 5.5 425 214 Op 1 11/0.000 - CDS 424920 - 426485 411 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Term 426561 - 426592 4.1 426 214 Op 2 . - CDS 426656 - 427219 607 ## COG0450 Peroxiredoxin - Prom 427283 - 427342 3.9 427 215 Tu 1 . + CDS 427591 - 428337 758 ## COG1651 Protein-disulfide isomerase + Prom 428376 - 428435 3.9 428 216 Tu 1 . + CDS 428542 - 429444 448 ## COG0583 Transcriptional regulator + Prom 429457 - 429516 4.7 429 217 Op 1 8/0.011 + CDS 429591 - 430811 903 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase 430 217 Op 2 . + CDS 430796 - 431413 483 ## COG1475 Predicted transcriptional regulators + Term 431428 - 431467 0.6 - Term 431339 - 431386 5.0 431 218 Tu 1 . - CDS 431414 - 432574 823 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 432615 - 432674 5.2 + Prom 432589 - 432648 3.6 432 219 Tu 1 . + CDS 432694 - 433782 1096 ## COG0371 Glycerol dehydrogenase and related enzymes + Term 433867 - 433907 -0.4 433 220 Op 1 9/0.000 - CDS 433792 - 433989 277 ## COG2879 Uncharacterized small protein - Term 434055 - 434089 -0.2 434 220 Op 2 4/0.523 - CDS 434102 - 436207 2746 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 436263 - 436322 7.0 - Term 436286 - 436346 0.3 435 221 Op 1 5/0.273 - CDS 436388 - 436801 374 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 436 221 Op 2 5/0.273 - CDS 436804 - 437550 878 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 437 221 Op 3 5/0.273 - CDS 437550 - 438407 1191 ## COG1535 Isochorismate hydrolase 438 221 Op 4 6/0.125 - CDS 438421 - 440031 1503 ## COG1021 Peptide arylation enzymes 439 221 Op 5 . - CDS 440041 - 441216 1130 ## COG1169 Isochorismate synthase - Prom 441271 - 441330 6.3 + Prom 441208 - 441267 5.1 440 222 Tu 1 . + CDS 441405 - 442361 1015 ## COG4592 ABC-type Fe2+-enterobactin transport system, periplasmic component - Term 442056 - 442120 1.7 441 223 Tu 1 . - CDS 442365 - 443615 1193 ## COG0477 Permeases of the major facilitator superfamily - Prom 443658 - 443717 3.9 + Prom 443602 - 443661 4.9 442 224 Op 1 8/0.011 + CDS 443714 - 444730 1206 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 443 224 Op 2 7/0.080 + CDS 444727 - 445719 986 ## COG4779 ABC-type enterobactin transport system, permease component 444 224 Op 3 . + CDS 445716 - 446531 196 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 445 225 Tu 1 . - CDS 446528 - 447661 964 ## COG3765 Chain length determinant protein - Prom 447816 - 447875 8.7 - Term 447809 - 447865 2.6 446 226 Op 1 2/0.761 - CDS 447877 - 451758 3520 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 447 226 Op 2 2/0.761 - CDS 451755 - 451973 252 ## COG3251 Uncharacterized protein conserved in bacteria 448 226 Op 3 . - CDS 451976 - 453178 719 ## COG2382 Enterochelin esterase and related enzymes - Prom 453224 - 453283 5.6 + Prom 453186 - 453245 6.4 449 227 Tu 1 . + CDS 453421 - 455661 2693 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 455774 - 455810 2.4 + Prom 455708 - 455767 5.7 450 228 Tu 1 . + CDS 455827 - 456456 434 ## COG2977 Phosphopantetheinyl transferase component of siderophore synthetase - Term 456533 - 456577 3.2 451 229 Tu 1 . - CDS 456578 - 456730 149 ## EFER_2525 small toxic membrane polypeptide, HokE-like protein (partial) - Prom 456878 - 456937 4.7 + Prom 456957 - 457016 3.3 452 230 Op 1 . + CDS 457184 - 458302 865 ## COG2170 Uncharacterized conserved protein 453 230 Op 2 . + CDS 458368 - 458616 262 ## ECP_0611 protein of unknown function (DUF1158); region: DUF1158; pfam06643 454 230 Op 3 4/0.523 + CDS 458681 - 459064 389 ## COG2315 Uncharacterized protein conserved in bacteria 455 230 Op 4 3/0.659 + CDS 459143 - 459796 794 ## COG0778 Nitroreductase + Term 459810 - 459854 12.6 + Prom 459798 - 459857 27.9 456 231 Tu 1 . + CDS 459921 - 461168 1197 ## COG0668 Small-conductance mechanosensitive channel + Term 461208 - 461246 7.6 457 232 Tu 1 . - CDS 461280 - 462656 1668 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 462686 - 462745 3.5 458 233 Op 1 11/0.000 - CDS 462758 - 465901 3349 ## COG3696 Putative silver efflux pump 459 233 Op 2 3/0.659 - CDS 465913 - 467136 1359 ## COG0845 Membrane-fusion protein 460 233 Op 3 3/0.659 - CDS 467152 - 467484 530 ## COG5569 Uncharacterized conserved protein 461 233 Op 4 . - CDS 467508 - 468890 473 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 - Prom 468970 - 469029 3.9 + Prom 468849 - 468908 2.7 462 234 Op 1 40/0.000 + CDS 469047 - 469730 683 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 463 234 Op 2 . + CDS 469720 - 471162 1163 ## COG0642 Signal transduction histidine kinase + Prom 471182 - 471241 7.4 464 235 Op 1 . + CDS 471312 - 473549 1815 ## ECS88_0605 bacteriophage N4 adsorption protein B 465 235 Op 2 . + CDS 473536 - 476508 2341 ## COG0457 FOG: TPR repeat 466 235 Op 3 . + CDS 476509 - 477399 643 ## ECS88_0603 hypothetical protein + Term 477408 - 477441 2.5 + Prom 477759 - 477818 5.4 467 236 Tu 1 . + CDS 478057 - 479010 622 ## COG4571 Outer membrane protease + Term 479030 - 479072 4.0 Predicted protein(s) >gi|296918679|gb|GG773021.1| GENE 1 119 - 580 329 153 aa, chain - ## HITS:1 COG:no KEGG:APECO1_243 NR:ns ## KEGG: APECO1_243 # Name: not_defined # Def: putative Rz endopeptidase from lambdoid prophage # Organism: E.coli_APEC # Pathway: not_defined # 1 153 5 157 157 254 100.0 6e-67 MNRVTAIISALVICIIVCLSWAVNHYRDNAITYKAQRDKNARELTLANAVITDIQMRQRD VAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLA DTAERDYFTLRERLITMQKQLEGTQKYINEQCR >gi|296918679|gb|GG773021.1| GENE 2 577 - 1074 222 165 aa, chain - ## HITS:1 COG:ybcS KEGG:ns NR:ns ## COG: ybcS COG3772 # Protein_GI_number: 16128538 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Escherichia coli K12 # 1 165 1 165 165 310 98.0 8e-85 MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDI MLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETMRGALYSFVYNVGAGNFRTSTLL RKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREICLWGQQ >gi|296918679|gb|GG773021.1| GENE 3 1074 - 1280 206 68 aa, chain - ## HITS:1 COG:no KEGG:APECO1_513 NR:ns ## KEGG: APECO1_513 # Name: not_defined # Def: phage lysis protein # Organism: E.coli_APEC # Pathway: not_defined # 1 68 33 100 100 129 100.0 5e-29 MDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKED KRKAARGE >gi|296918679|gb|GG773021.1| GENE 4 1878 - 2960 1049 360 aa, chain + ## HITS:1 COG:nmpC KEGG:ns NR:ns ## COG: nmpC COG3203 # Protein_GI_number: 16128536 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 342 21 367 375 549 91.0 1e-156 MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYAR LGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYG VAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKND RTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTDGQVAYGKSKFNASGKNAEVWAAGL KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDL GVHGDRDLVKYVDVGATYYFNKNMSTFVDYKINLIDDSKFTKTAGIDTDDIVAVGLVYQF >gi|296918679|gb|GG773021.1| GENE 5 3149 - 3532 317 127 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1182 NR:ns ## KEGG: ECS88_1182 # Name: ybcQ # Def: antitermination protein Q homolog; DLP12 prophage # Organism: E.coli_S88 # Pathway: not_defined # 1 127 1 127 127 251 100.0 6e-66 MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLIPSKVKSRPQCCDDDAMIICGCMARL KKNNSDLHDLLVDYYVCGMTFMSLASKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLDMD IVANNSN >gi|296918679|gb|GG773021.1| GENE 6 3755 - 3982 225 75 aa, chain - ## HITS:1 COG:rus KEGG:ns NR:ns ## COG: rus COG4570 # Protein_GI_number: 16128533 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli K12 # 1 75 46 120 120 153 100.0 6e-38 MLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVT KGGRLELTITEMGNE >gi|296918679|gb|GG773021.1| GENE 7 4324 - 4665 171 113 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1180 NR:ns ## KEGG: ECS88_1180 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 113 15 127 127 234 100.0 1e-60 MDYSQLSDFEINRMVGDIIFKGLWASKPETSGNNTNKWYYGNADTTFEPLNHLPDYCNDP SASWPIIEKYRISILDQLTEWCVDAKGVSPIFDTRPLRAAMIVFLLMQEANNA >gi|296918679|gb|GG773021.1| GENE 8 4841 - 5368 204 175 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1179 NR:ns ## KEGG: ECS88_1179 # Name: not_defined # Def: DNA N-6-adenine-methyltransferase from phage origin # Organism: E.coli_S88 # Pathway: not_defined # 1 175 21 195 195 349 100.0 3e-95 MTIKSNTPAHDKDCWQTPLWLFDALDIEFGFWLDSAASDKNALCAHWLTEDDDALNSEWV SHGAIWNNPPYSNIRPWVEKAAEQCIQQRQTVVMLVPEDMSVGWFSKALESVDEVRIITD GRINFIEPSTGLEKKGNSKGSMLLIWRPFISPRRMFTTVSKAALMAIGQGVRRAA >gi|296918679|gb|GG773021.1| GENE 9 5365 - 5805 261 146 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1178 NR:ns ## KEGG: ECS88_1178 # Name: not_defined # Def: recombination protein NinB from phage origin # Organism: E.coli_S88 # Pathway: not_defined # 1 146 7 152 152 276 100.0 2e-73 MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLGDVSRQV EWHGRWLDAESWKCVFTAALKQQDVVPNLAGNGFVVIGQSTSRMRVSEFAELLELIQAFG TERGVKWSDEARLALEWKARWGDRAA >gi|296918679|gb|GG773021.1| GENE 10 5879 - 6169 122 96 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1177 NR:ns ## KEGG: ECS88_1177 # Name: not_defined # Def: Ren protein from phage origin # Organism: E.coli_S88 # Pathway: not_defined # 1 96 1 96 96 176 100.0 2e-43 MTGKEAIIHYLGTHNSFCAPDVAALTGATVTSINQAAAKMARAGLLVIEGKVWRTVYYRF ATKEEREGKMSTNLIFKECRQSATMKRILAVYGVKR >gi|296918679|gb|GG773021.1| GENE 11 6166 - 6867 451 233 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1176 NR:ns ## KEGG: ECS88_1176 # Name: not_defined # Def: replication protein P of bacteriophage # Organism: E.coli_S88 # Pathway: not_defined # 1 233 1 233 233 445 100.0 1e-124 MKNIAAQMVNFDREQMRRIANNMPEQYDEKPQVQQVAQIINGVFSQLLATFPASLANRDQ NELNEIRRQWVLAFRENGITTMEQVNAGMRVARRQNRPFLPSPGQFVAWCREEASVIAGL PNVSELVDMVYEYCRKRGLYPDAESYPWKSNAHYWLVTNLYQNMRANALTDAELRRKAAD ELTCMTARINRGETIPEPVKQLPVMGGRPLNRVQALAKIAEIKAKLGLKGASV >gi|296918679|gb|GG773021.1| GENE 12 6864 - 7763 436 299 aa, chain - ## HITS:1 COG:no KEGG:APECO1_233 NR:ns ## KEGG: APECO1_233 # Name: not_defined # Def: putative replication protein O of bacteriophage # Organism: E.coli_APEC # Pathway: not_defined # 1 299 1 299 299 585 100.0 1e-166 MTNTAKILNFCRGNFAKQERNVADLDDGYARLSNMLLEAYSGADLTKRQFKVLLAILRKT YGWNKPMDRITDSQLSEITKLPVKRCNEAKLELVRMNIIKQQGGMFGPNKNISEWCIPQN EGKSPKTRDKTSLKLGDCYPSKQGDTKDTITKEKRKDYSSENSGESSDQPENDLSVVKPD AAIQSGSKWGTAEDLTAAEWMFDMVKTIAPSARKPNFAGWANDIRLMRERDGRNHRDMCV LFRWACQDNFWSGNVLSPAKLRDKWTQLEINRNKQQAGVTACKPKLDLTNTDWIYGVDL >gi|296918679|gb|GG773021.1| GENE 13 7796 - 8092 135 98 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1173 NR:ns ## KEGG: ECS88_1173 # Name: not_defined # Def: regulatory protein CII from phage origin # Organism: E.coli_S88 # Pathway: not_defined # 1 98 1 98 98 182 100.0 5e-45 MERTSYSKLSQRDVDRAETDLLINLSAITQRGLAKMIGCHESKISRTDWRFIASVLCAFG MASDISPISRAFKYALDGLTNKKRPAATERSEQIQMEF >gi|296918679|gb|GG773021.1| GENE 14 8234 - 8449 68 71 aa, chain - ## HITS:1 COG:no KEGG:c1547 NR:ns ## KEGG: c1547 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 71 56 126 126 156 100.0 3e-37 MSNLRKYRESLNISQTTLAKAVGCTQGAIGHWESGRRFPDLKTCRALVACLNKLGAKVSL DDVFPPEHKAA >gi|296918679|gb|GG773021.1| GENE 15 8567 - 9220 327 217 aa, chain + ## HITS:1 COG:ECs1185 KEGG:ns NR:ns ## COG: ECs1185 COG1974 # Protein_GI_number: 15830439 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 1 217 1 217 217 442 99.0 1e-124 MKWYELARSRMKELGITQEKLAEELGMTQGGIGHWLRGSRHPSLSDIGVVFKYLGIDNIS FNHDGTFSPVGEYSSAPVKKQYEYPVFSHVQAGMFSPELRTFTKGDAERLVSTTKKASDS AFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCIARLGGDEFTFKKLIRDSG QVFLQPLNPQYPMIPCNESCSVVGKVIASQWPEETFG >gi|296918679|gb|GG773021.1| GENE 16 9817 - 10566 156 249 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1170 NR:ns ## KEGG: ECS88_1170 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 249 2 250 250 511 100.0 1e-143 MCSTVISQLGFECHPIGKTLRIISPFTYCDDGEHVGAFIREVNGRYLVSDRCDALMNMEA RGISLTKKRLDEIRQLLLKEGAELNARGEIIAWATEKDVGAITSNIIRAGILASTLSLDW YQPVQAEKFESMVIDYLYHTELRDALSLRENVYGLSGHQITVPVTIKTDIPKYVFTSSVK HGGSWNSAYSLLGKLIDLKASSEEYNNRFVVIDSEAIGDQMQQLSLLFHESSQVLPFSKR ETWVKRLAA >gi|296918679|gb|GG773021.1| GENE 17 11049 - 11321 86 90 aa, chain + ## HITS:1 COG:no KEGG:APECO1_227 NR:ns ## KEGG: APECO1_227 # Name: not_defined # Def: N protein # Organism: E.coli_APEC # Pathway: not_defined # 1 90 25 114 114 124 100.0 2e-27 MSRKTEFKGTAASRRRARRANLQSQEAISSDKLHRPTPSRVVLQCKLKPAMRAEVITLTT LTRKYEGSTCLPNVALYAAGYRKSKQLTAR >gi|296918679|gb|GG773021.1| GENE 18 11338 - 11919 249 193 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1167 NR:ns ## KEGG: ECS88_1167 # Name: not_defined # Def: Superinfection exclusion protein B # Organism: E.coli_S88 # Pathway: not_defined # 1 193 1 193 193 368 100.0 1e-101 MNNSWWQELMHFFLQGMTLKQLIHMLIILIILIIVMPVSVKEWINLHNPEILPHYWMYYI LLFCVSYVLNGVVNSAYHAVTERIEVFAAQKRKSKEEKYVQDLFDSLTLGERAYLAFAVA ANNQLQTEKGAHESISLLKKGLLVRRPPAVGYPDTDRFVIPESYRHECYIRFAGKADSLM DELIAQDKHGKNK >gi|296918679|gb|GG773021.1| GENE 19 12063 - 12149 93 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEEEFEEFEEHPQDVMEQYQDYPYDYDY >gi|296918679|gb|GG773021.1| GENE 20 12133 - 12333 151 66 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1165 NR:ns ## KEGG: ECS88_1165 # Name: not_defined # Def: restriction inhibitor protein ral (antirestriction protein) # Organism: E.coli_S88 # Pathway: not_defined # 1 66 1 66 66 125 100.0 6e-28 MTTTIDTNQWCGQFKRCNGCKLQSECMVKPEEMFPVMEDGKYVDKWAIRTTAMIARELGK QNNKAA >gi|296918679|gb|GG773021.1| GENE 21 12516 - 12884 283 122 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1391 NR:ns ## KEGG: ECUMN_1391 # Name: not_defined # Def: putative single-stranded DNA binding protein of prophage # Organism: E.coli_UMN026 # Pathway: not_defined # 1 122 1 122 122 229 100.0 2e-59 MSNIKKYIIDYDWKASIEIEIDHDVMTEEKLHQINNFWSDSEYRLNKHGSVLNAVLIMLA QHALLIAISSDLNAYGVVCEFDWNDGNGQEGWPPMDGSEGIRITDIDTSGIFDSDDMTIK AA >gi|296918679|gb|GG773021.1| GENE 22 12957 - 13121 101 54 aa, chain + ## HITS:1 COG:no KEGG:G2583_0292 NR:ns ## KEGG: G2583_0292 # Name: not_defined # Def: antitermination protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 54 35 88 88 118 98.0 8e-26 MQYAIAGWPVAGCPSESLLERITRKLRDGWKRLIDILNQPGVPKNGSNNYGYPD >gi|296918679|gb|GG773021.1| GENE 23 13090 - 13233 95 47 aa, chain + ## HITS:1 COG:no KEGG:ECO26_3209 NR:ns ## KEGG: ECO26_3209 # Name: not_defined # Def: putative kil protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 47 43 89 96 89 97.0 4e-17 MDQTIMAIQTKFTIATFIGDEKMFREAVDAYKKWILILKLRSSKSIH >gi|296918679|gb|GG773021.1| GENE 24 13309 - 13605 305 98 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1389 NR:ns ## KEGG: ECUMN_1389 # Name: gam # Def: Host-nuclease inhibitor protein gam from bacteriophage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 98 41 138 138 166 97.0 2e-40 MNAYYIQDRLEAQSWARHYQQIAREEKEAELADDMEKGLPQHLFESLCIDHLQRHGASKK AITRAFDDDVEFQERMAEHIRYIVETIAHHQADIDSEV >gi|296918679|gb|GG773021.1| GENE 25 13611 - 14396 710 261 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0583 NR:ns ## KEGG: ECUMN_0583 # Name: not_defined # Def: recombination protein bet from phage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 261 1 261 261 527 100.0 1e-148 MSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWT KEIYAFPDKQNGIVPVVGVDGWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVT EWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCARLAFGFAGIYDKDEAERIVE NTAYTAERQPERDITPVNDETMQEINTLLIALDKTWDDDLLPLCSQIFRRDIRASSELTQ AEAVKALGFLKQKATEQKVAA >gi|296918679|gb|GG773021.1| GENE 26 14549 - 15073 432 174 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1387 NR:ns ## KEGG: ECUMN_1387 # Name: not_defined # Def: exonuclease from phage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 174 53 226 226 365 100.0 1e-100 MKMSYFHTLLAEVCTGVAPEVNAKALAWGKQYENDARTLFEFTSGVNVTESPIIYRDESM RTACSPDGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYF ANYDPRMKREGLHYVVVERDEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR >gi|296918679|gb|GG773021.1| GENE 27 15803 - 16024 89 73 aa, chain + ## HITS:1 COG:ECs3006 KEGG:ns NR:ns ## COG: ECs3006 COG1734 # Protein_GI_number: 15832260 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Escherichia coli O157:H7 # 1 73 1 73 73 110 93.0 5e-25 MADIIDSASEIEELQRNTAIKMRRLNYLAVSATHCCECGDPIDERRRLAVQGCRTCASCQ QDLELIRKQRGIK >gi|296918679|gb|GG773021.1| GENE 28 16024 - 16350 271 108 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1155 NR:ns ## KEGG: ECS88_1155 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 108 2 109 109 207 100.0 1e-52 MANLQLAVKSEYFDAMIRGEKTEEYRLCNDYWNKRIMFREYDRLIITKGYPKRDDSSRRI DVPYDGYEVKTITHPHFGDKPVKVFAIKVNISTEYQSAQHKVKNVQSD >gi|296918679|gb|GG773021.1| GENE 29 16334 - 16573 154 79 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1154 NR:ns ## KEGG: ECS88_1154 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 79 1 79 79 149 100.0 4e-35 MFRVIDPNTWYVDHHGTPCKILRSTHNKVHYIRKGRTCIASMFRFNHDFEPVNKADADRI AEEIETAEHIKKLRDMRRK >gi|296918679|gb|GG773021.1| GENE 30 16713 - 16949 137 78 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1382 NR:ns ## KEGG: ECUMN_1382 # Name: ymfG # Def: putative excisionase # Organism: E.coli_UMN026 # Pathway: not_defined # 1 78 1 78 78 155 100.0 6e-37 MSRLITLQDWAKEEFGDLAPSERVLKKYAQGKMMAPPAIKVGRYWMIDRNSRFVGTLAEP QLPINANPKLQRIIADGC >gi|296918679|gb|GG773021.1| GENE 31 17593 - 18081 53 162 aa, chain + ## HITS:1 COG:ECs1609 KEGG:ns NR:ns ## COG: ECs1609 COG0582 # Protein_GI_number: 15830863 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 162 219 380 380 322 99.0 2e-88 MLLALVTGQRLGDICNLKFSDIWDDMLHITQEKTGSKLAIPLNLKCDALNITLREVISQC RDAVVSKYLVHYRHTTSQANRGDQVSANTLTTAFKKAREKCGIKWEQGTAPTFHEQRSLS ERLYREQGLDTQKLLGHKSRKMTDRYNDDRGKDWIIVDIKTA >gi|296918679|gb|GG773021.1| GENE 32 18195 - 19445 1471 416 aa, chain - ## HITS:1 COG:ECs1608 KEGG:ns NR:ns ## COG: ECs1608 COG0538 # Protein_GI_number: 15830862 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 416 1 416 416 842 99.0 0 MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYKGE RKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQ ELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLR EEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGA FKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIA CMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSA EMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGDAIIKNM >gi|296918679|gb|GG773021.1| GENE 33 19647 - 20270 482 207 aa, chain + ## HITS:1 COG:ECs1607 KEGG:ns NR:ns ## COG: ECs1607 COG1187 # Protein_GI_number: 15830861 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 207 11 217 217 396 98.0 1e-110 MQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQ GVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVT LNDGPTLPAGAELVEEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFP TLRLIRYAMGDYSLDNLANGEWRDATD >gi|296918679|gb|GG773021.1| GENE 34 20280 - 20741 424 153 aa, chain + ## HITS:1 COG:ECs1606 KEGG:ns NR:ns ## COG: ECs1606 COG0494 # Protein_GI_number: 15830860 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 314 100.0 3e-86 MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISA QPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRS PLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI >gi|296918679|gb|GG773021.1| GENE 35 20795 - 21901 1317 368 aa, chain + ## HITS:1 COG:ECs1605 KEGG:ns NR:ns ## COG: ECs1605 COG0482 # Protein_GI_number: 15830859 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Escherichia coli O157:H7 # 1 368 16 383 383 744 99.0 0 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL GQRKGLGIGGTKDGTEEPWYVVDKDVENNILIVAQGHEHPRLMSVGLIAQQLHWVDREPF TGTMRCTVKTRYRQTDIPCTVKALDADRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII EQRLPLPV >gi|296918679|gb|GG773021.1| GENE 36 21937 - 22578 724 213 aa, chain + ## HITS:1 COG:ycfC KEGG:ns NR:ns ## COG: ycfC COG2915 # Protein_GI_number: 16129095 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in purine metabolism # Organism: Escherichia coli K12 # 1 213 1 213 213 380 99.0 1e-105 MAKNYYDITLALAGICQSARLVQQLAHQGHCDGDALHVSLNSIIDMNPSSTLAVFGGSEA NLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSAKGALDTLGNRINGLQRQL EHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRATLLAGIRAAVL WHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL >gi|296918679|gb|GG773021.1| GENE 37 22582 - 23952 1667 456 aa, chain + ## HITS:1 COG:purB KEGG:ns NR:ns ## COG: purB COG0015 # Protein_GI_number: 16129094 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Escherichia coli K12 # 1 456 1 456 456 929 99.0 0 MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFA ADAIGYLDAIVASFSEEDAARIKTIERTTNHDVKAVEYFLKEKVADIPELHAVSEFIHFA CTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQYRDIPLLSRTHGQPATPSTI GKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQ WNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPH KVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQST LKGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAEGMK QFIDGLALPEEEKARLKAMTPANYIGRAITMVDELK >gi|296918679|gb|GG773021.1| GENE 38 24121 - 24792 803 223 aa, chain + ## HITS:1 COG:ECs1602 KEGG:ns NR:ns ## COG: ECs1602 COG0745 # Protein_GI_number: 15830856 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 223 1 223 223 416 99.0 1e-116 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGL SLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNS GLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYP DAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGYLFELR >gi|296918679|gb|GG773021.1| GENE 39 24792 - 26252 1220 486 aa, chain + ## HITS:1 COG:phoQ KEGG:ns NR:ns ## COG: phoQ COG0642 # Protein_GI_number: 16129092 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 486 1 486 486 955 99.0 0 MKKLLHLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFY TLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFH EIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVVVDT IPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLN PATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSV SDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGV NISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGI PLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQH SAPKDE >gi|296918679|gb|GG773021.1| GENE 40 26328 - 27449 1263 373 aa, chain + ## HITS:1 COG:ECs1573 KEGG:ns NR:ns ## COG: ECs1573 COG2850 # Protein_GI_number: 15830827 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 373 4 376 376 749 99.0 0 MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGK WQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGG GVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILY IPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPA DVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQG DVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAML AALVNSGYWFFEG >gi|296918679|gb|GG773021.1| GENE 41 27498 - 28724 1496 408 aa, chain - ## HITS:1 COG:ECs1572 KEGG:ns NR:ns ## COG: ECs1572 COG2195 # Protein_GI_number: 15830826 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 1 408 1 408 408 835 100.0 0 MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEMGLINVTLSEKGTLMA TLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVL HQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNIPHGDIRVAFTPDEEVGKGAK HFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIVGNNVHPGTAKGVMVNALSLAAR IHAEVPADESPEMTEGYEGFYHLASMKGTVERADMHYIIRDFDRKQFEARKRKMMEIAKK VGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRDCDIEPELKPIRGGTDGAQ LSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELTAQRK >gi|296918679|gb|GG773021.1| GENE 42 28992 - 30110 1171 372 aa, chain + ## HITS:1 COG:ECs1571 KEGG:ns NR:ns ## COG: ECs1571 COG3842 # Protein_GI_number: 15830825 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 372 7 378 378 731 99.0 0 MNKQPNSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGL ETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP RVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQM QNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAG FIGEINMFNATVIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEIND DNHAEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVE SWEVVLADEEHK >gi|296918679|gb|GG773021.1| GENE 43 30124 - 30951 1049 275 aa, chain + ## HITS:1 COG:ECs1570 KEGG:ns NR:ns ## COG: ECs1570 COG1176 # Protein_GI_number: 15830824 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli O157:H7 # 1 271 11 281 287 444 99.0 1e-124 MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLLDPLYFEVLLHSLN MALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYL NEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGAS KLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDW PFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE >gi|296918679|gb|GG773021.1| GENE 44 30948 - 31742 858 264 aa, chain + ## HITS:1 COG:ECs1500 KEGG:ns NR:ns ## COG: ECs1500 COG1177 # Protein_GI_number: 15830754 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 431 100.0 1e-121 MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAA QHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFM LLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPL AMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVL SLVMVIASQLIARDKTKGNTGDVK >gi|296918679|gb|GG773021.1| GENE 45 31739 - 32785 1519 348 aa, chain + ## HITS:1 COG:potD KEGG:ns NR:ns ## COG: potD COG0687 # Protein_GI_number: 16129086 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 348 1 348 348 650 99.0 0 MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYE SNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKLSNFSNLDPDMLNKPFD PNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKL GYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGSAFVARQAG TPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAA RKLLSPEVANDKTLYPDAETIKNGEWQNDVGSASSIYEEYYQKLKAGR >gi|296918679|gb|GG773021.1| GENE 46 32843 - 33304 267 153 aa, chain + ## HITS:1 COG:no KEGG:APECO1_203 NR:ns ## KEGG: APECO1_203 # Name: ymfA # Def: putative inner membrane protein # Organism: E.coli_APEC # Pathway: not_defined # 1 140 15 154 167 275 100.0 5e-73 MSQDSRVFFRIFFGIGLVLILISVVIFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKN GSWYPVVVFRPTPDYTLIFNSSIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKW GFIGIMGVIFIAVGLLISMPSSKKTRRKRKSRP >gi|296918679|gb|GG773021.1| GENE 47 33301 - 34089 313 262 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1135 NR:ns ## KEGG: ECS88_1135 # Name: ycfZ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 262 35 296 296 491 100.0 1e-137 MKKIIILLSLLILLPLTATSNPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGVAPF IVVLPDINNEASLRQNGKAMLAHAASSMSNVKGSVLLLFTTREPRLIMITNGQVESSMDD KHLGLLVENHTLAYLHADLWYQGINNALAVLQAQILKQPTPPLTYYPHPGQQHENDPPGS TTTLGLFAWAVAFIVFAAFFNYTTRLYYALKFAVAMAVANMGYQALCLYIDNSFAITRIS PLWAGLIGVCTFIAALLWTSKR >gi|296918679|gb|GG773021.1| GENE 48 34227 - 35048 679 273 aa, chain - ## HITS:1 COG:ycfY KEGG:ns NR:ns ## COG: ycfY COG0846 # Protein_GI_number: 16129083 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Escherichia coli K12 # 1 273 1 273 279 543 99.0 1e-154 MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVLVLTGAGISAESGIRTF RAADGLWEEHRVEDVATPEGFDRDPELVQTFYNARRRQLQQPEIQPNAAHLALAKLQDAL GDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQVLDWTGDVTPEDKCHCCQFP APLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELN LEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGL >gi|296918679|gb|GG773021.1| GENE 49 35064 - 35975 810 303 aa, chain - ## HITS:1 COG:ycfX KEGG:ns NR:ns ## COG: ycfX COG1940 # Protein_GI_number: 16129082 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli K12 # 1 303 1 303 303 622 99.0 1e-178 MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEADRRFGCKGSV GIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFT QYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRLPVDALTMMGLDFPLRRCGCG QHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVCLGNI LTIVDPDLVVIGGGLSNFPAITTQLAERLPRHLLPVARVPRIERARHGDAGGMRGAAFLH LTD >gi|296918679|gb|GG773021.1| GENE 50 36004 - 37242 1311 412 aa, chain - ## HITS:1 COG:lolE KEGG:ns NR:ns ## COG: lolE COG4591 # Protein_GI_number: 16129081 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Escherichia coli K12 # 1 412 3 414 414 752 99.0 0 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV VPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ EQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQP KRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAG EVINSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDI AVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLS SDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ >gi|296918679|gb|GG773021.1| GENE 51 37248 - 37949 227 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 6 216 9 210 309 92 29 3e-17 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA EINSRALEMLKAVGLEHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE >gi|296918679|gb|GG773021.1| GENE 52 37942 - 39141 1355 399 aa, chain - ## HITS:1 COG:ECs1494 KEGG:ns NR:ns ## COG: ECs1494 COG4591 # Protein_GI_number: 15830748 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Escherichia coli O157:H7 # 1 399 1 399 399 703 100.0 0 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE >gi|296918679|gb|GG773021.1| GENE 53 39403 - 40476 954 357 aa, chain + ## HITS:1 COG:ycfT KEGG:ns NR:ns ## COG: ycfT COG4763 # Protein_GI_number: 16129078 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 357 1 357 357 617 96.0 1e-176 MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLSKCWIYFNLYLAPFRMP VFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERNLSN ASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVICKIFNRLALPLFVLFILMSVAVNF VPTPWWGMNSVSRNLPYYSLGAWFGATLMTCVKAVPLRRHLLMASLLAVLAVGAWLFNIS LLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMN AARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR >gi|296918679|gb|GG773021.1| GENE 54 40604 - 44050 3765 1148 aa, chain + ## HITS:1 COG:mfd KEGG:ns NR:ns ## COG: mfd COG1197 # Protein_GI_number: 16129077 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Escherichia coli K12 # 1 1148 1 1148 1148 2274 99.0 0 MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEIS QFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPH SFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPY RLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRD PEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLENSAERFQADTL ARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPD LAIQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASD RGRYLMIGAAEHGFVDTMRNLALICESDLLGERVARRRQDSRRAINPDTLIRNLAELHIG QPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENA PLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFE TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTL LAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKF KDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPP ARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAI GHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLG EEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVDLRMPSLLPDDFIPDV NTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEG NEKGGVIEFAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMR ELEENAIA >gi|296918679|gb|GG773021.1| GENE 55 44198 - 45127 822 309 aa, chain + ## HITS:1 COG:ECs1491 KEGG:ns NR:ns ## COG: ECs1491 COG1376 # Protein_GI_number: 15830745 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 307 2 308 320 572 99.0 1e-163 MIKTHFSRWLTFFTFAAAVALALPAKANTWPLPQAGSRLVGENKFHVVENDGGSLEAIAK KYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKN SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNII NTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMD VRSGMPVAS >gi|296918679|gb|GG773021.1| GENE 56 45219 - 45476 261 85 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1126 NR:ns ## KEGG: ECS88_1126 # Name: ycfR # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 85 1 85 85 130 100.0 2e-29 MKNVKNLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADE MGAKSFRITSVTGPNTLHGTAVIYK >gi|296918679|gb|GG773021.1| GENE 57 45639 - 46349 444 236 aa, chain + ## HITS:1 COG:ECs1489 KEGG:ns NR:ns ## COG: ECs1489 COG1309 # Protein_GI_number: 15830743 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 476 98.0 1e-134 MVSGLVNGGDYFYNNLSFTVTRYNGIMATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQ HGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVE SALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQ RQARGEIPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIARTTLRLWPELLK >gi|296918679|gb|GG773021.1| GENE 58 46411 - 46950 533 179 aa, chain - ## HITS:1 COG:ycfJ KEGG:ns NR:ns ## COG: ycfJ COG3134 # Protein_GI_number: 16129073 # Func_class: S Function unknown # Function: Predicted outer membrane lipoprotein # Organism: Escherichia coli K12 # 1 178 1 178 179 298 100.0 3e-81 MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVT HRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESD TYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPLDSNGQLILNNKA >gi|296918679|gb|GG773021.1| GENE 59 47177 - 48481 1353 434 aa, chain - ## HITS:1 COG:ndh KEGG:ns NR:ns ## COG: ndh COG1252 # Protein_GI_number: 16129072 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Escherichia coli K12 # 1 434 1 434 434 861 99.0 0 MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLD EGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDTLVM ALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGA TGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHSELTKLG VRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEP TLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKNYQYK DHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLV GSINRVIRPRLKLH >gi|296918679|gb|GG773021.1| GENE 60 48902 - 49444 542 180 aa, chain - ## HITS:1 COG:ECs1486 KEGG:ns NR:ns ## COG: ECs1486 COG3150 # Protein_GI_number: 15830740 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 180 20 199 199 375 100.0 1e-104 MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDE RPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKIDRPEEYADIATKCVTNFR EKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG >gi|296918679|gb|GG773021.1| GENE 61 49467 - 50492 988 341 aa, chain - ## HITS:1 COG:ycfO KEGG:ns NR:ns ## COG: ycfO COG1472 # Protein_GI_number: 16129070 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli K12 # 1 341 1 341 341 675 99.0 0 MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNHLVVA VDQEGGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGWLMASEMIAMDIDISFAPV LDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETP CDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSDVDPRPASGSPYWLKTVLRQELG FDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERV TRLYHKGSFSRQELMDSARWKAISTRLNQLHERWQEEKAGH >gi|296918679|gb|GG773021.1| GENE 62 50503 - 51327 270 274 aa, chain - ## HITS:1 COG:ECs1484 KEGG:ns NR:ns ## COG: ECs1484 COG0510 # Protein_GI_number: 15830738 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Escherichia coli O157:H7 # 1 274 1 274 274 521 98.0 1e-148 MPFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSA FLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFG WRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRLLRLSPLHMDVHAGNLVHSAS GLKLIDWEYAGDGDIALELAAVWVENIDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ >gi|296918679|gb|GG773021.1| GENE 63 51308 - 51949 562 213 aa, chain - ## HITS:1 COG:ECs1483 KEGG:ns NR:ns ## COG: ECs1483 COG3417 # Protein_GI_number: 15830737 # Func_class: R General function prediction only # Function: Collagen-binding surface adhesin SpaP (antigen I/II family) # Organism: Escherichia coli O157:H7 # 1 213 1 213 213 367 100.0 1e-102 MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPG PIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSVLLVDSVNNRTNGSLNAAE ATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGAHYVLYSS ASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ >gi|296918679|gb|GG773021.1| GENE 64 51963 - 52340 206 125 aa, chain - ## HITS:1 COG:ECs1482 KEGG:ns NR:ns ## COG: ECs1482 COG5633 # Protein_GI_number: 15830736 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 125 1 125 125 226 98.0 9e-60 MRKGCFGLMSLALLVLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSA SSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVR LYLYL >gi|296918679|gb|GG773021.1| GENE 65 52343 - 52702 437 119 aa, chain - ## HITS:1 COG:ECs1481 KEGG:ns NR:ns ## COG: ECs1481 COG0537 # Protein_GI_number: 15830735 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 204 99.0 4e-53 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQ ALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGCPLGPMLAHKGL >gi|296918679|gb|GG773021.1| GENE 66 53036 - 55225 2110 729 aa, chain + ## HITS:1 COG:ECs1480 KEGG:ns NR:ns ## COG: ECs1480 COG4773 # Protein_GI_number: 15830734 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Escherichia coli O157:H7 # 1 729 1 729 729 1404 99.0 0 MLSTQFNRDNQHQAIIKPSLLAGCIALALLPSAAFAAPVTEETVIVEGSATAPDDGENDY NVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALY YSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAINM VRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS EKTFFSGIVDADLGDLTMLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDW AYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNY GPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIF PDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLTPITGNNYELG LKSDWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAI TDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYT DTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGAPRN FSITGTYQF >gi|296918679|gb|GG773021.1| GENE 67 55285 - 56718 1641 477 aa, chain - ## HITS:1 COG:ptsG_1 KEGG:ns NR:ns ## COG: ptsG_1 COG1263 # Protein_GI_number: 16129064 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 397 1 397 397 739 100.0 0 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMP LIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVLG GIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQ TFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRY MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPI EFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIV GIGYAIVYYTIFRVLIKALDLKTPGREDATEDAKATGTSEMAPALVAAFGGKENITNLDA CITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNH >gi|296918679|gb|GG773021.1| GENE 68 57013 - 57810 748 265 aa, chain - ## HITS:1 COG:ECs1478 KEGG:ns NR:ns ## COG: ECs1478 COG0084 # Protein_GI_number: 15830732 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli O157:H7 # 1 265 1 265 265 528 100.0 1e-150 MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNV VFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIG RELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIV TFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVE ELAQVTTDNFARLFHIDASRLQSIR >gi|296918679|gb|GG773021.1| GENE 69 57821 - 58825 724 334 aa, chain - ## HITS:1 COG:ECs1477 KEGG:ns NR:ns ## COG: ECs1477 COG0470 # Protein_GI_number: 15830731 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 598 98.0 1e-171 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG HCRGCQLMQAGTHPDYYTLTPEKGKNALGIDAVREVTEKLNEHARLGGAKVVWVTDAALL TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV TMSQAALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVQSGDWYSLLAALNHEQ APARLHWLATLLMDALKRHHGAAQVTNVDVPGLVVELANHLSPSRLQAILGDVCHIREQL MSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL >gi|296918679|gb|GG773021.1| GENE 70 58822 - 59463 705 213 aa, chain - ## HITS:1 COG:tmk KEGG:ns NR:ns ## COG: tmk COG0125 # Protein_GI_number: 16129061 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Escherichia coli K12 # 1 213 1 213 213 395 99.0 1e-110 MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSV GDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHML ATLRDAVLGGFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAAQ DKSIHTIDATQPLEAVMDAIRTTVTNWVKELDA >gi|296918679|gb|GG773021.1| GENE 71 59453 - 60475 1130 340 aa, chain - ## HITS:1 COG:yceG KEGG:ns NR:ns ## COG: yceG COG1559 # Protein_GI_number: 16129060 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Escherichia coli K12 # 1 340 1 340 340 652 99.0 0 MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYAD KIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRL SDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWMYTANTTDVALLKR AHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAK TPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKNAQ >gi|296918679|gb|GG773021.1| GENE 72 60478 - 61287 535 269 aa, chain - ## HITS:1 COG:pabC KEGG:ns NR:ns ## COG: pabC COG0115 # Protein_GI_number: 16129059 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Escherichia coli K12 # 1 269 1 269 269 544 98.0 1e-155 MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFW PQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEG MTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNADEALVLDSEGWVTECCAANLF WRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEEALQADEMVICNALMP VMPVRACGDVSFSSATLYEYLAPLCERPN >gi|296918679|gb|GG773021.1| GENE 73 61407 - 62648 1204 413 aa, chain - ## HITS:1 COG:ECs1473 KEGG:ns NR:ns ## COG: ECs1473 COG0304 # Protein_GI_number: 15830727 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 1 413 1 413 413 729 100.0 0 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHT SLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAY GDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLV LEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGY VNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRD QAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI >gi|296918679|gb|GG773021.1| GENE 74 62744 - 62980 420 78 aa, chain - ## HITS:1 COG:ECs1472 KEGG:ns NR:ns ## COG: ECs1472 COG0236 # Protein_GI_number: 15830726 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Escherichia coli O157:H7 # 1 78 1 78 78 108 100.0 2e-24 MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEA EKITTVQAAIDYINGHQA >gi|296918679|gb|GG773021.1| GENE 75 63191 - 63925 252 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 243 4 242 242 101 29 4e-20 MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNV TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKA VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA PGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG MYMV >gi|296918679|gb|GG773021.1| GENE 76 63938 - 64867 942 309 aa, chain - ## HITS:1 COG:fabD KEGG:ns NR:ns ## COG: fabD COG0331 # Protein_GI_number: 16129055 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Escherichia coli K12 # 1 309 1 309 309 532 100.0 1e-151 MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTW QTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKF MQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAG AACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNG DAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEP SAMAAALEL >gi|296918679|gb|GG773021.1| GENE 77 64883 - 65836 935 317 aa, chain - ## HITS:1 COG:ECs1469 KEGG:ns NR:ns ## COG: ECs1469 COG0332 # Protein_GI_number: 15830723 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 612 100.0 1e-175 MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAAT RAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALS VADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPGIISTHLH ADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDW LVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVL LEAFGGGFTWGSALVRF >gi|296918679|gb|GG773021.1| GENE 78 65904 - 66944 554 346 aa, chain - ## HITS:1 COG:ZplsX KEGG:ns NR:ns ## COG: ZplsX COG0416 # Protein_GI_number: 15801207 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Escherichia coli O157:H7 EDL933 # 1 346 1 346 346 633 99.0 0 MGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDAITPLLAKADFEQRSRLQIIPAQSVIA SDARPSQAIRASRGSSMRVALELVKEGRAQACVSAGNTGALMGLAKLLLKPLEGIERPAL VTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVEIPNPRVALLNIGEEEV KGLDSIRDASAVLKTIPSINYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFL SLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQ RAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGFELLDGGKSGTLR >gi|296918679|gb|GG773021.1| GENE 79 67055 - 67228 292 57 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15801206|ref|NP_287223.1| 50S ribosomal protein L32 [Escherichia coli O157:H7 EDL933] # 1 57 1 57 57 117 100 9e-25 MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK >gi|296918679|gb|GG773021.1| GENE 80 67280 - 67801 478 173 aa, chain - ## HITS:1 COG:ECs1466 KEGG:ns NR:ns ## COG: ECs1466 COG1399 # Protein_GI_number: 15830720 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 320 100.0 7e-88 MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAV LNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL AMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEAQKPNPFAVLASLKRK >gi|296918679|gb|GG773021.1| GENE 81 67961 - 68584 433 207 aa, chain + ## HITS:1 COG:yceF KEGG:ns NR:ns ## COG: yceF COG0424 # Protein_GI_number: 16129050 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli K12 # 1 207 1 207 207 418 100.0 1e-117 MAIINTLYLMEKNMPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLR LAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLA LFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGR DPNTLVGLPLIALCQMLRREGKNPLMG >gi|296918679|gb|GG773021.1| GENE 82 68696 - 69655 190 319 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 95 309 83 284 285 77 29 6e-13 MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKL EAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLS FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALV RGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGR THQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRI EAPMDEGLKRCLQKLRNAR >gi|296918679|gb|GG773021.1| GENE 83 70228 - 73413 3156 1061 aa, chain + ## HITS:1 COG:ECs1462 KEGG:ns NR:ns ## COG: ECs1462 COG1530 # Protein_GI_number: 15830716 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Escherichia coli O157:H7 # 1 1061 1 1061 1061 1475 98.0 0 MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY GAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEAL QWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS LSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQME TPHYHVLRVRKGEETSTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPDVPPA PTPAEPAAPVVAPAPKAATATPASPAQPGLLSRFFGALKALFSGGEETKPAEQSAPKAEA KPERQQDRRKPRQNNRRDRNERRDTRSERTEGSDNREENRRNRRQAQQQTAETRESRQQA EVTEKARTTDEQQAPRRERSRRRNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRR KQRQLNQKVRYEQSVAEEAVVAPVVEETVAAEPIVQEAPAPRTELVKVPLPVVAQAAPEQ QEENNADNRDNGGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASG KVWIRYPIVRPQDVQVEEQHEQEEVQVQPMVTEVPVAAAVKPVVSAPVVEEVAEVVEAPV QVAEPQPEVVETTHPEVIAAAVTEQPQVITESDVAVAQEVAEHAEPVVEPQEETADIEEV AETAEVVVAEPEVVAQPAAPVVAEVAAEVETVAAVEPEVTVEHNHATAPMTRAPAPEYVP EAPRHSDWQRPTFAFEGKGAAGGHTATHHASAAPARPQPVE >gi|296918679|gb|GG773021.1| GENE 84 73608 - 74561 1011 317 aa, chain - ## HITS:1 COG:ECs1461 KEGG:ns NR:ns ## COG: ECs1461 COG1344 # Protein_GI_number: 15830715 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 511 99.0 1e-145 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ LLNLANTTDGNGRYIFAGYKTETAPFSEADGDYVGGTESIKQQVDASRSMVIGHTGDKIF DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQAS YKAFTDMQGLSLFQLNK >gi|296918679|gb|GG773021.1| GENE 85 74573 - 76216 1518 547 aa, chain - ## HITS:1 COG:flgK KEGG:ns NR:ns ## COG: flgK COG1256 # Protein_GI_number: 16129045 # Func_class: N Cell motility # Function: Flagellar hook-associated protein # Organism: Escherichia coli K12 # 1 547 1 547 547 883 99.0 0 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYV SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTL VSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLN DQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST ARQLAAVPSSADPSRTTVAYVDRTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQ LALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPAVLQNTKNKGDVAIGATVTDASAVLAT DYKISFDNNQWQVTRLASNTTFTVTPDANGKVAFDGLELTFTGTPAVNDSFTLKPVSDAI VNMDVLITDEAKIAMASEEDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYASLVSDIG NKTATLKTSSATQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIF DALINIR >gi|296918679|gb|GG773021.1| GENE 86 76282 - 77223 935 313 aa, chain - ## HITS:1 COG:flgJ_1 KEGG:ns NR:ns ## COG: flgJ_1 COG3951 # Protein_GI_number: 16129044 # Func_class: M Cell wall/membrane/envelope biogenesis; N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Rod binding protein # Organism: Escherichia coli K12 # 1 167 1 167 167 287 98.0 2e-77 MISDSKLLASAAWDAQSLNELKAKAGEDPAANIRPVARQVEGMFVQMMLKSMRDALPKDG LFSSERTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTPEQPLPEESTPAAPMKFPLET VVRYQNQALSQLVQKAVPRNYDDSLPGNSKAFLAQLSLPAQLASQQSGVPHHLILAQAAL ESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAKKVKAKFRVYSSYL EALSDYVGLLTRNPRYAAVTTAVSAEQGAQALQDAGYATDPHYARKLTNMIQQMKSISDK VSKTYSMNIDNLF >gi|296918679|gb|GG773021.1| GENE 87 77223 - 78320 825 365 aa, chain - ## HITS:1 COG:ECs1458 KEGG:ns NR:ns ## COG: ECs1458 COG1706 # Protein_GI_number: 15830712 # Func_class: N Cell motility # Function: Flagellar basal-body P-ring protein # Organism: Escherichia coli O157:H7 # 1 365 1 365 365 555 99.0 1e-158 MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQ TLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGT LLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQLNGGRITNGAVIERELPSQFG VGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQ NMQVNVTPQDAKVVINSRTGSVVMNREVPLDSCAVARGNLSVTVNRQANVSQPDTPFGGG QTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLRA KLEII >gi|296918679|gb|GG773021.1| GENE 88 78332 - 78544 198 70 aa, chain - ## HITS:1 COG:ECs1457 KEGG:ns NR:ns ## COG: ECs1457 COG2063 # Protein_GI_number: 15830711 # Func_class: N Cell motility # Function: Flagellar basal body L-ring protein # Organism: Escherichia coli O157:H7 # 1 70 163 232 232 135 98.0 2e-32 MVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWL QRFFLNLSPM >gi|296918679|gb|GG773021.1| GENE 89 78573 - 79061 438 162 aa, chain - ## HITS:1 COG:ECs1457 KEGG:ns NR:ns ## COG: ECs1457 COG2063 # Protein_GI_number: 15830711 # Func_class: N Cell motility # Function: Flagellar basal body L-ring protein # Organism: Escherichia coli O157:H7 # 1 159 1 159 232 272 99.0 2e-73 MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAQPINY GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVKGGGG >gi|296918679|gb|GG773021.1| GENE 90 79114 - 79896 958 260 aa, chain - ## HITS:1 COG:ECs1456 KEGG:ns NR:ns ## COG: ECs1456 COG4786 # Protein_GI_number: 15830710 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Escherichia coli O157:H7 # 1 260 1 260 260 434 100.0 1e-122 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY EINSKAVSTTDQMLQKLTQL >gi|296918679|gb|GG773021.1| GENE 91 80068 - 80823 703 251 aa, chain - ## HITS:1 COG:flgF KEGG:ns NR:ns ## COG: flgF COG4787 # Protein_GI_number: 16129040 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Escherichia coli K12 # 1 251 1 251 251 417 99.0 1e-116 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS TPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLTIQGHPV VGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFR LSAESQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDN AGRANQLLSMS >gi|296918679|gb|GG773021.1| GENE 92 80843 - 82048 1244 401 aa, chain - ## HITS:1 COG:ECs1454 KEGG:ns NR:ns ## COG: ECs1454 COG1749 # Protein_GI_number: 15830708 # Func_class: N Cell motility # Function: Flagellar hook protein FlgE # Organism: Escherichia coli O157:H7 # 1 401 1 401 401 601 97.0 1e-172 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDSLPSVNAFDASNADSYNK KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLVFNANGVLTSNP TANISTGAINGADPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR >gi|296918679|gb|GG773021.1| GENE 93 82073 - 82768 798 231 aa, chain - ## HITS:1 COG:ECs1453 KEGG:ns NR:ns ## COG: ECs1453 COG1843 # Protein_GI_number: 15830707 # Func_class: N Cell motility # Function: Flagellar hook capping protein # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 314 100.0 1e-85 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN VAISASNGGTQLVAQPLQFALVQGVIRGNNGNTLDLGTYGTTTLDEVRQII >gi|296918679|gb|GG773021.1| GENE 94 82780 - 83184 315 134 aa, chain - ## HITS:1 COG:ECs1452 KEGG:ns NR:ns ## COG: ECs1452 COG1558 # Protein_GI_number: 15830706 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 223 100.0 8e-59 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG GVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN TVKSMMLKTLTLGQ >gi|296918679|gb|GG773021.1| GENE 95 83188 - 83604 439 138 aa, chain - ## HITS:1 COG:flgB KEGG:ns NR:ns ## COG: flgB COG1815 # Protein_GI_number: 16129036 # Func_class: N Cell motility # Function: Flagellar basal body protein # Organism: Escherichia coli K12 # 1 138 1 138 138 227 98.0 6e-60 MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDAT SVVALTMTSTKHIPAQALTPPSAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSL SALSGQIKGMMNVLQSGN >gi|296918679|gb|GG773021.1| GENE 96 83759 - 84418 294 219 aa, chain + ## HITS:1 COG:flgA KEGG:ns NR:ns ## COG: flgA COG1261 # Protein_GI_number: 16129035 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar basal body P-ring biosynthesis protein # Organism: Escherichia coli K12 # 1 219 1 219 219 371 96.0 1e-103 MLTIKRSVAIIAILFSPLSAASNLTSQLHTFFSAQLAGVSDEVRVSIRTAPNLLPPCEQP LLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRG RLDTLPPRTVLDINQLVDAVSLRDLSPDQPIQLTHFRQAWRVKAGQRVNVIASGDGFSAN AEGQALNNAAVAQNARVRMISGQVVSGVVDADGNILINL >gi|296918679|gb|GG773021.1| GENE 97 84494 - 84787 333 97 aa, chain + ## HITS:1 COG:ECs1449 KEGG:ns NR:ns ## COG: ECs1449 COG2747 # Protein_GI_number: 15830703 # Func_class: K Transcription; N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Negative regulator of flagellin synthesis (anti-sigma28 factor) # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 123 100.0 7e-29 MSIDRTSPLKPVSTVQPRETTDAPVTNTRAAKTTASTSTSVTLSDAQAKLMQPGSSDINL ERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN >gi|296918679|gb|GG773021.1| GENE 98 84792 - 85208 449 138 aa, chain + ## HITS:1 COG:flgN KEGG:ns NR:ns ## COG: flgN COG3418 # Protein_GI_number: 16129033 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar biosynthesis/type III secretory pathway chaperone # Organism: Escherichia coli K12 # 1 138 1 138 138 203 97.0 6e-53 MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLR RKEPNTANSVDISQRWQEITGKTQQLRQLNQHNGWLLEGQIERNQQALEMLKPHQEPTLY GANGQTSTTHRGSKKISI >gi|296918679|gb|GG773021.1| GENE 99 85248 - 86783 1012 511 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 [Haemophilus influenzae 22.1-21] # 3 502 5 516 524 394 40 1e-108 MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAF SQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADT ADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAAP YFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPRINFHDAGAMRVVKQMGPAILGV SVSQISLIINTIFASFLASGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFASGNH DEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALIAYSVG LIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLILTQLMNLAFIGPLKHAGLSLSIGLAACL NASLLYWQLRKQKIFTPQPGWMAFLLRLVVAVLVMSGVLLGMLHIMPEWSLGTMPWRLLR LMAVVLAGIAAYFAALAVLGFKVKEFARRTV >gi|296918679|gb|GG773021.1| GENE 100 86893 - 87816 675 307 aa, chain - ## HITS:1 COG:mviM KEGG:ns NR:ns ## COG: mviM COG0673 # Protein_GI_number: 16129031 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 307 1 307 307 619 99.0 1e-177 MKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICDSWRIPYADSLSSL AASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVG FNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFTLLDDYLHVVDTALWLSGGKA SLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAGSQRETVQAVTDGALIDITDMRE WREERGQGVVNKPIPGWQSTLEQRGFVGCARHFIECVQNQTVPQTAGEQAVLAQRIVDKI WRDAMSE >gi|296918679|gb|GG773021.1| GENE 101 87818 - 88465 788 215 aa, chain - ## HITS:1 COG:yceH KEGG:ns NR:ns ## COG: yceH COG3132 # Protein_GI_number: 16129030 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 215 1 215 215 393 99.0 1e-109 MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLD NLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSR AARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRESRYMHLFSGEVEDQPAVMDM SNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD >gi|296918679|gb|GG773021.1| GENE 102 88476 - 89060 1063 194 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15801183|ref|NP_287200.1| ribosomal-protein-S5-alanine N-acetyltransferase [Escherichia coli O157:H7 EDL933] # 1 194 1 194 194 414 99 1e-114 MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQ ARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGL MFEALSAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDH VLTALTTPDWTPGR >gi|296918679|gb|GG773021.1| GENE 103 89296 - 90504 1282 402 aa, chain + ## HITS:1 COG:yceL KEGG:ns NR:ns ## COG: yceL COG0477 # Protein_GI_number: 16129028 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 402 11 412 412 701 100.0 0 MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWAAVMVGIALGLRQFIQQ GLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLLWFSCLLSGLGGTLFDPPR SALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLCAAF NAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLAGYYMLAVQVMLMLPIMVNDVAG APSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHRLMAGLLIMSLSMMPVGMVSGLQQL FTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLAIGGAIGYIGGGWLFDLG KSAHQPELPWMMLGIIGIFTFLALGWQFSQKRAARRLLERDA >gi|296918679|gb|GG773021.1| GENE 104 90568 - 91215 665 215 aa, chain + ## HITS:1 COG:ECs1442 KEGG:ns NR:ns ## COG: ECs1442 COG2999 # Protein_GI_number: 15830696 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin 2 # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 427 100.0 1e-120 MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSRYMP ESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLLPRFAKSAFDEFSTPAARK YFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVKPNAVNGELSEDDIQLFPLLR NLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI >gi|296918679|gb|GG773021.1| GENE 105 91349 - 91909 635 186 aa, chain + ## HITS:1 COG:no KEGG:APECO1_145 NR:ns ## KEGG: APECO1_145 # Name: yceB # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 186 20 205 205 353 100.0 2e-96 MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTN LTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVD ATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGSQGEAMAKKLAKGIEVKPGEI VIPFTD >gi|296918679|gb|GG773021.1| GENE 106 92141 - 93061 739 306 aa, chain + ## HITS:1 COG:pyrC KEGG:ns NR:ns ## COG: pyrC COG0418 # Protein_GI_number: 16129025 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase # Organism: Escherichia coli K12 # 1 306 43 348 348 627 99.0 1e-180 MPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAA KLYPANATTNSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVM EPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRPHLYC LPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATV FEEMNALQYFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETV RWSVKQ >gi|296918679|gb|GG773021.1| GENE 107 93135 - 93380 223 81 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C1186 NR:ns ## KEGG: UTI89_C1186 # Name: not_defined # Def: DNA damage-inducible protein I # Organism: E.coli_UTI89 # Pathway: not_defined # 1 81 20 100 100 156 100.0 2e-37 MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDK QRISEILQETWESADDWFVSE >gi|296918679|gb|GG773021.1| GENE 108 93670 - 93924 186 84 aa, chain + ## HITS:1 COG:no KEGG:APECO1_142 NR:ns ## KEGG: APECO1_142 # Name: bssS, yceP # Def: biofilm formation regulatory protein BssS # Organism: E.coli_APEC # Pathway: not_defined # 1 84 2 85 85 164 100.0 2e-39 MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGTEVGQTLWLTTDVARQF ISILEAGIAKIESGDFQVNEYRRH >gi|296918679|gb|GG773021.1| GENE 109 94039 - 95157 812 372 aa, chain + ## HITS:1 COG:solA KEGG:ns NR:ns ## COG: solA COG0665 # Protein_GI_number: 16129022 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 1 372 1 372 372 779 98.0 0 MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKY VPLVLRAQMLWDELSRHNEDDPIFVRSGVINLGPADSAFLANVAHSAEQWQLNVEKLDAQ GIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDD GVTIETADGEYQAKKAIVCAGTWVKDLLPELPVQPVRKVFAWYQADGRYSVKNKFPAFTG ELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVLPGIG CCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDKKSD FDLTPFRLSRFQ >gi|296918679|gb|GG773021.1| GENE 110 95205 - 95318 139 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF >gi|296918679|gb|GG773021.1| GENE 111 95579 - 96145 306 188 aa, chain + ## HITS:1 COG:ECs1435 KEGG:ns NR:ns ## COG: ECs1435 COG3038 # Protein_GI_number: 15830689 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 342 98.0 3e-94 MSFTNTPERYGVISAALHWLSAIIVYGMFALGLWMVTLSYYDGWYHQAPELHKSIGILLM MGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLFAIGISGYLISTADGKPIS VFGWFDVPATLSDAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLG KSSSDYGV >gi|296918679|gb|GG773021.1| GENE 112 96149 - 96724 615 191 aa, chain + ## HITS:1 COG:ECs1434 KEGG:ns NR:ns ## COG: ECs1434 COG2353 # Protein_GI_number: 15830688 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 360 100.0 1e-99 MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFT FDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELD ITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVD LIISVEGVQQK >gi|296918679|gb|GG773021.1| GENE 113 96766 - 97818 855 350 aa, chain - ## HITS:1 COG:yceA KEGG:ns NR:ns ## COG: yceA COG1054 # Protein_GI_number: 16129018 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Escherichia coli K12 # 1 350 1 350 350 736 98.0 0 MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKVTRDALYQLFTALNVFGRVYL AHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVAD GIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQ LPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGVIEYARKAREQGL PVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYK GCCSEICCEESALPPDEQRRRRAGRENGNKIFNKSRGRLNTTLGIPDPTE >gi|296918679|gb|GG773021.1| GENE 114 98043 - 98963 850 306 aa, chain + ## HITS:1 COG:ECs1432 KEGG:ns NR:ns ## COG: ECs1432 COG1560 # Protein_GI_number: 15830686 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 617 99.0 1e-177 MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVH RNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQ AQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPLIDWLQTWGRLRSNKSMLDRK DLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFV PRRKPDGKGYQLIILPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPE GVPSRY >gi|296918679|gb|GG773021.1| GENE 115 99135 - 100361 858 408 aa, chain + ## HITS:1 COG:yceE KEGG:ns NR:ns ## COG: yceE COG0477 # Protein_GI_number: 16129016 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 408 1 408 408 715 99.0 0 MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVF SITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLL GGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITAS VLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAP ILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVL LLIPMSYVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGN VTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRRIPQISN >gi|296918679|gb|GG773021.1| GENE 116 100444 - 100818 496 124 aa, chain + ## HITS:1 COG:no KEGG:APECO1_135 NR:ns ## KEGG: APECO1_135 # Name: msyB # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 124 2 125 125 190 100.0 2e-47 MTMYATLEEAIDAAREEFLADNPGIDAENANVQQFNAQKYVLQDGDIMWQVEFFADEGEE GECLPMLSGEAAQSVFDGDYDEIEIRQEWQDENTLHEWDEGEFQLEPPLDTEEGRTAADE WDER >gi|296918679|gb|GG773021.1| GENE 117 100819 - 101046 251 75 aa, chain - ## HITS:1 COG:ECs1428 KEGG:ns NR:ns ## COG: ECs1428 COG5645 # Protein_GI_number: 15830682 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 146 97.0 1e-35 MRLIVMSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDSAWRYVTILDLPFSLVF DTLLLPIDVHHGPYE >gi|296918679|gb|GG773021.1| GENE 118 101218 - 103731 2278 837 aa, chain - ## HITS:1 COG:ECs1427 KEGG:ns NR:ns ## COG: ECs1427 COG2943 # Protein_GI_number: 15830681 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 837 21 857 857 1673 99.0 0 MPIAASEKAALPKTDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWPDSLADGQLIK DDEGRDQLKAMPEVKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLTKEEQESEQKW RTVGTIRRYILLILTLAQTVVATWYMKTILPYQGWALINPMDMVGQDVWVSFMQLLPYML QTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNPEHRTALIMPI CNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWMELIAEVGGEG QIFYRRRRRRVKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAG IIQSSPKASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHC ALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRW CHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFL QPRQLFPVWPQWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLE VLFSVLLAPVRMLFHTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWA VGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVD TDRFLEMNRQCSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETP EKLNRDRRLVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ >gi|296918679|gb|GG773021.1| GENE 119 103754 - 105307 1501 517 aa, chain - ## HITS:1 COG:ECs1426 KEGG:ns NR:ns ## COG: ECs1426 COG3131 # Protein_GI_number: 15830680 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Escherichia coli O157:H7 # 7 517 1 511 511 1033 100.0 0 MKHKLQMMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYEAPKSNLPSVFRDM KYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATAVKRIKYSPDYFT FGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLA IDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQS KIYLRDKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNGLSIHAGNGEWIWRPLNNP KHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGEWGKGSVELVEIP TNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQ SNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLV MRVKVKDAKKTTEMRAALVNADQTLSETWSYQLPANE >gi|296918679|gb|GG773021.1| GENE 120 105683 - 106840 698 385 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1059 NR:ns ## KEGG: ECS88_1059 # Name: mdoC # Def: glucans biosynthesis protein # Organism: E.coli_S88 # Pathway: not_defined # 1 385 1 385 385 704 100.0 0 MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEPSLWLTLFNDFIHSFRM QVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLLTLPQFIMLQYVKGKAESW PGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRIRNNLENSDKTNKKFSMVKLS VIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTLFYLPFFILGALAFIFPHLKALF TTPSRGCTFAAALAFVAYLLNQRYGSGDAWMYETESVITMVLGLWMVNVVFSFGHRLLNF QSARVTYFVNASLFIYLVHHPLTLFFGAYITPHITSNWLGFLCGLIFVVGIAIILYEIHL RIPLLKFLFSGKPVVKRENDKAPAR >gi|296918679|gb|GG773021.1| GENE 121 106848 - 108269 771 473 aa, chain - ## HITS:1 COG:ymdC KEGG:ns NR:ns ## COG: ymdC COG1502 # Protein_GI_number: 16129009 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli K12 # 1 473 21 493 493 942 98.0 0 MPRLASAVLPLCSQHPGQCGLFPLEKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRL LFSALLAAAKRGVRVRLLLDDNNTPGLDDILRLLDSHPRIEVRLFNPFSFRLLRPLGYIT DFSRLNRRMHNKSFTVDGVVTLVGGRNIGDAYFGAGEEPLFSDLDIMAIGPVVEDVADDF ARYWYCKSVSPLQQVLDVPEGEMADRIELPASWHDDAMTHRYLRKMESSPFVNHLVDGTL PLIWAKTRLLSDDPAKGEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLL RMVRKGVKIAILTNSLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGI TGNSGASLHAKTFSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQY DAAWQLRLDRWGRINWVDRHAKKEIVLKKDPATSFWKRVMVRLASILPVEWLL >gi|296918679|gb|GG773021.1| GENE 122 108271 - 108804 351 177 aa, chain - ## HITS:1 COG:ECs1423 KEGG:ns NR:ns ## COG: ECs1423 COG2110 # Protein_GI_number: 15830677 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Escherichia coli O157:H7 # 1 177 1 177 177 347 100.0 5e-96 MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGDC PTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPA ISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYDEENAHLYERLLTQQGDE >gi|296918679|gb|GG773021.1| GENE 123 108899 - 109210 228 103 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1056 NR:ns ## KEGG: ECS88_1056 # Name: ymdA # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 103 1 103 103 200 100.0 1e-50 MFRPFLDSLMLGSMFFPFIAIAGSTAQGGVIHFYGQIVEPACDVSTQSTPVEMNCPQNGS VPGRTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEYN >gi|296918679|gb|GG773021.1| GENE 124 109331 - 109663 193 110 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1217 NR:ns ## KEGG: ECUMN_1217 # Name: csgC # Def: putative autoagglutination protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 110 54 163 163 162 100.0 4e-39 MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEK TLSLPANQPIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQWPPSSEKS >gi|296918679|gb|GG773021.1| GENE 125 109722 - 110177 334 151 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_2121 NR:ns ## KEGG: ECIAI39_2121 # Name: csgA # Def: cryptic curlin major subunit # Organism: E.coli_IAI39 # Pathway: not_defined # 1 151 1 151 151 187 99.0 2e-46 MKLLKVAAIAAIVFSGSALAGVVPQYGGGGNHGGGGNNSGPNSELNIYQYGGGNSALALQ ADARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSATLDQWNGKDSTMTVKQFGG GNGAAVDQTASNSSVNVTQVGFGNNATAHQY >gi|296918679|gb|GG773021.1| GENE 126 110218 - 110700 261 160 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_2090 NR:ns ## KEGG: EcSMS35_2090 # Name: csgB # Def: curlin minor subunit # Organism: E.coli_SECEC # Pathway: not_defined # 1 160 1 160 160 223 100.0 2e-57 MYDQVQGDNMKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQ AGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGNANDASISQGAYGN TAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR >gi|296918679|gb|GG773021.1| GENE 127 111312 - 111458 63 48 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C1162 NR:ns ## KEGG: UTI89_C1162 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 3 48 1 46 46 75 100.0 8e-13 MTMNTMDFIKHDETPLFLLIAHLTAASKIEAPEVLTDVALLCVVINQP >gi|296918679|gb|GG773021.1| GENE 128 111426 - 112076 266 216 aa, chain + ## HITS:1 COG:ECs1417 KEGG:ns NR:ns ## COG: ECs1417 COG2771 # Protein_GI_number: 15830671 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 408 100.0 1e-114 MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYAMEDQERVVNG LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR >gi|296918679|gb|GG773021.1| GENE 129 112081 - 112470 117 129 aa, chain + ## HITS:1 COG:no KEGG:ECSP_1340 NR:ns ## KEGG: ECSP_1340 # Name: csgE # Def: curli assembly protein CsgE # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 129 1 129 129 256 100.0 2e-67 MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS TGDLAHDEF >gi|296918679|gb|GG773021.1| GENE 130 112495 - 112911 378 138 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_2125 NR:ns ## KEGG: ECIAI39_2125 # Name: csgF # Def: curli assembly protein CsgF # Organism: E.coli_IAI39 # Pathway: not_defined # 1 138 1 138 138 225 100.0 4e-58 MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDF GIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKT GQTSTIQVSGLQNNSTDF >gi|296918679|gb|GG773021.1| GENE 131 112938 - 113771 790 277 aa, chain + ## HITS:1 COG:ECs1414 KEGG:ns NR:ns ## COG: ECs1414 COG1462 # Protein_GI_number: 15830668 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in formation of curli polymers # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 550 100.0 1e-156 MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDET GQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV AINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVN VSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES >gi|296918679|gb|GG773021.1| GENE 132 113836 - 114357 560 173 aa, chain - ## HITS:1 COG:no KEGG:APECO1_121 NR:ns ## KEGG: APECO1_121 # Name: ycdZ # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 173 7 179 179 282 100.0 4e-75 MAAFSAIMRGMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGL AISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIG ACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSTKTAHREQQIKNKA >gi|296918679|gb|GG773021.1| GENE 133 114429 - 114983 679 184 aa, chain - ## HITS:1 COG:ycdY KEGG:ns NR:ns ## COG: ycdY COG3381 # Protein_GI_number: 16128998 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli K12 # 1 184 1 184 184 347 99.0 6e-96 MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQDELLTRLQKSCDMAQV SADYNALFIGDECAVPPYRSAWVEGATEAEVRAFLSERGMPLADTPADHIGTLLLAASWL EDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFWRTMAPLTRDAISAMWDELEE DSEE >gi|296918679|gb|GG773021.1| GENE 134 115007 - 115744 698 245 aa, chain - ## HITS:1 COG:ycdX KEGG:ns NR:ns ## COG: ycdX COG1387 # Protein_GI_number: 16128997 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Escherichia coli K12 # 1 245 1 245 245 477 99.0 1e-134 MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWP RVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHEPVFAPHDKATNTQAMIAT IASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNSSFLHSRKGSEDNCRAVAAAV RDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPERILNVSPRRLLNFLESRGMAPIA EFADL >gi|296918679|gb|GG773021.1| GENE 135 115799 - 116737 531 312 aa, chain - ## HITS:1 COG:ycdW KEGG:ns NR:ns ## COG: ycdW COG0111 # Protein_GI_number: 16128996 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli K12 # 1 312 14 325 325 635 99.0 0 MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAV FALGAGVDSILSKLQAHPEMLKPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQ QNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAG REELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAAL DSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGE RLCGQVDRARGY >gi|296918679|gb|GG773021.1| GENE 136 117131 - 118498 307 455 aa, chain - ## HITS:1 COG:ZycdT_2 KEGG:ns NR:ns ## COG: ZycdT_2 COG2199 # Protein_GI_number: 15801016 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 EDL933 # 251 444 1 194 202 374 94.0 1e-103 MEKDYLGISSTVLVSLLFGLALVLVNSWFNQPTVEEVVPRSTYLMVMIALFFIDTVAFIF MQLYFIYDRRQFSNCILSLAFLSCLIYFIKTVIIIQQIIEGRLTSSVVQNDIAIYYLFRQ MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVVGGPIVAHILSSHYESYNLHIA ELTNENDQVVWKTSYVTIMIFMWLTLLSVNLYFNGLRCDIWNGVTVIAFCAVLYNVSLLF MSRYSVSIWYISRTIEVVSKLTVMVIFMCHIFSALRVTKDIAHRDSLTNIFNRNYFFNEL TVQSASAKKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVSIIGKSIRPDDLFARVGG EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQKNELNPKE IYQLADNALYEAKETGRNKVVVKEAEILINRKDDE >gi|296918679|gb|GG773021.1| GENE 137 119086 - 121509 1599 807 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C1087 NR:ns ## KEGG: UTI89_C1087 # Name: pgaA # Def: outer membrane protein PgaA # Organism: E.coli_UTI89 # Pathway: not_defined # 1 807 1 807 807 1555 100.0 0 MYSSSRKRCPKTKWALKLLTAAFLAASPAAKSAVNNAYDALIIEARKGNTQPALLWFAQK SALSNNQIADWLQIALWAGQDKQVITVYNRYRHQQLPARGYAAVAVAYRNLQQWQNSLTL WQKALSLESQNKDYQRGQILTLADAGHYDSALVKLKQLNSGAPDKANLLAEAYIYKLAGR HEDELRAMTGSLPENALTQQYPTEYVQALRNNQLAAAIDDANLTPDIRADIHAELVRLSF MPTRSESERYAIADRALAQYAALEILWHDNSDRTAQYQRIQVDHLGALLTRDRYKDVISH YQRLKNTRQIIPPWAQYWVASAYLKEQQPKKAQSIMTELFYHKETIAPDLSDEELADLFY SHLESENYPGALTVTQHTINTSPPFLRLMGTPTSIPNDTWLQGHSFLSTVAKYSNDLPQA EMIARELAYNAPGNQGLRIDYASVLQARGWHRAAENELKKAEVIEPRNINLEVEQAWTAL TLQEWQQAAVLTHDVVEREPQDPGVVRLKRAVDVHNLAELRIAGSTGIDAEGPDSGKHDV DLTTIVYSPPLKDNWRGFAGFGYADGQFSEGKGIVRDWLAGVEWRSRNIWLEAEYAERVF NHEHKPGARLSGWYDFNDNWRIGSQLERLSHRVPLRAMKNGVTGNSAQAYVRWYQNERRK YGVSWAFTDFSDSNQRQEVSLEGQERIWSSPYLIVDFLPNLYYEQNTEHDTPYYNPIKTF DIVPAFEASHLLWRSYENSWEQIFSAGVGASWQKHYGTDVVTQLGYGQRISWNDVIDAGA TLRWEKRPYDGDREHNLYVEFDMTFRF >gi|296918679|gb|GG773021.1| GENE 138 121518 - 123536 1020 672 aa, chain + ## HITS:1 COG:ycdR KEGG:ns NR:ns ## COG: ycdR COG0726 # Protein_GI_number: 16128987 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli K12 # 1 672 1 672 672 1322 97.0 0 MLRNGNKYILMLVSIIMLTACISQSRTSFIPPQDRESLLAEQPWPHNGFVAISWHNVEDE AADQRFMSVRTSALREQFAWLRENGYQPVSIAQIREAHRGGKPLPEKAVVLTFDDGYQSF YTRVFPILQAFQWPAVWAPVGSWVDTPADEQVKFGDEMVDREYFATWQQVREVARSRLVE VASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTK AKVNPHVFVWPYGEANGIAIEELKKLGYDMFFTLESGLANASQLDSIPRVLIANNPSLKE FAQQIITVQEKSPQRIMHIDLDYVYDENHQQMDRNIDVLIQRVKDMQISTVYLQAFADPD GDGLVKEVWFPNRLLPMKADIFSRVAWQLRTRSGVNIYAWMPVLSWDLDPTLTRVKYLPT GEKKAQIHPEQYRRLSPFDDRVRAQVGMLYEDLAGHAAFDGILFHDDALLSDYEDASAPA ITAYQQAGFSGSLSEIRQNPEQFKQWTRFKSRALTDFTLELSARVKAIRGPHVITARNIF ALPVIQPESEAWFAQNYADFLKSYDWTAIMAMPYMEGVAEKSADQWLIQLTNQIKNIPQA KDKSILELQAQNWQKNGQHQAISSQQLAHWMSLLQLNGGKNYGYYPDNFLHNQPEIDVIR PEFSTAWYPKND >gi|296918679|gb|GG773021.1| GENE 139 123649 - 124854 829 401 aa, chain + ## HITS:1 COG:ycdQ KEGG:ns NR:ns ## COG: ycdQ COG1215 # Protein_GI_number: 16128986 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 401 41 441 441 805 99.0 0 MSIMWIVGGVYFWVYRERHWPWGENAPAPQLKDNPSISIIIPCFNEEKNVEETIHAALAQ RYENIEVIAVNDGSTDKTRAILDRMAAQIPHLRVIHLAQNQGKAIALKTGAAAAKSEYLV CIDGDALLDRDAAAYIVEPMLYNPRVGAVTGNPRIRTRSTLVGKIQVGEYSSIIGLIKRT QRIYGNVFTVSGVIAAFRRSALAEVGYWSDDMITEDIDISWKLQLNQWAIFYEPRALCWI LMPETLKGLWKQRLRWAQGGAEVFLKNMTRLWRKENFRMWPLFFEYCLTTIWAFTCLVGF IIYAVQLAGVPLNIELTHIAATHTAGILLCTLCLLQFIVSLMIENRYEHNLTSSLFWIIW FPVIFWMLSLATTLVSFTRVMLMPKKQRARWVSPDRGILRG >gi|296918679|gb|GG773021.1| GENE 140 124967 - 125269 171 100 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_1263 NR:ns ## KEGG: ECH74115_1263 # Name: pgaD # Def: putative PGA biosynthesis protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 100 38 137 137 171 100.0 8e-42 MDLLTGYYWQSEARSRLQFYFLLAVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEYAE SLAIPDELYQQLQKSHRMSVHFTSQGQIKMVVSEKALVRA >gi|296918679|gb|GG773021.1| GENE 141 125319 - 126107 632 262 aa, chain - ## HITS:1 COG:ECs1266 KEGG:ns NR:ns ## COG: ECs1266 COG1702 # Protein_GI_number: 15830520 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Escherichia coli O157:H7 # 1 262 93 354 354 514 99.0 1e-146 MGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMSGVEAIGMARDSRDTSPILAR NEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDL GFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVV ILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVRSGLSDALERFEEDEMVGI VRFGKEDCVRSALCQRTLHAYS >gi|296918679|gb|GG773021.1| GENE 142 126086 - 126382 56 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315291122|gb|EFU50485.1| ## NR: gi|315291122|gb|EFU50485.1| hypothetical protein HMPREF9544_04463 [Escherichia coli MS 153-1] # 1 98 1 98 98 187 100.0 2e-46 MVTSCSGQCFVKQRSTTCGDFSSGSNFVTLYFSHFLSLLVLPTPQTVCVAVFRHFIQKQT MAYKEANPLMFVRIIALPTARVMNTNNSRCSPWEDKKQ >gi|296918679|gb|GG773021.1| GENE 143 126733 - 128004 1208 423 aa, chain - ## HITS:1 COG:ycdB KEGG:ns NR:ns ## COG: ycdB COG2837 # Protein_GI_number: 16128983 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Escherichia coli K12 # 1 423 1 423 423 856 99.0 0 MQYEDENGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGTLSPDARNEKQPFYGEH QAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDS GILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQ ICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP DSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQT GAPLGMLHEHDVPDYASDPEGKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSG QLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDANDYLGSAL LRV >gi|296918679|gb|GG773021.1| GENE 144 128010 - 129137 1620 375 aa, chain - ## HITS:1 COG:ECs1264 KEGG:ns NR:ns ## COG: ECs1264 COG2822 # Protein_GI_number: 15830518 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Escherichia coli O157:H7 # 1 375 1 375 375 702 99.0 0 MTINFRRNALQLSVAALFSSAFMANAADIPQVKVTVTDKQCEPMTITVNAGKTQFIIQNH SQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMTCGLLTNPKGKLIVKGEAT ADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDAIKAGDIEKAKALYAPTRQHY ERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHRLEKALFGDNTTKGMDKYADQLY TDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKISGEEDRYSHTDLWDFQANVEGSQK IVDLLRPQLQKANPELLAKVDANFKKVDTILAKYRTKDGFENYDKLTDADRNALKGPITA LAEDLAQLRGVLGLD >gi|296918679|gb|GG773021.1| GENE 145 129195 - 130025 972 276 aa, chain - ## HITS:1 COG:ECs1263 KEGG:ns NR:ns ## COG: ECs1263 COG0672 # Protein_GI_number: 15830517 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Escherichia coli O157:H7 # 1 275 1 275 276 452 99.0 1e-127 MFVPFLIMLREGLEAALIVSLIASYLKRTQRGRWIGVMWIGVLLAAALCLGLGIFINETT GEFPQKEQELFEGIVAVIAVVILTWMVFWMRKVSRNVKVQLEQAVDSALQRGNHHGWALV MMVFFAVAREGLESVFFLLAAFQQDVGIWPPLGAMLGLATAVVLGFLLYWGGIRLNLGAF FKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQEIAFDMSAVLSTHSLFGTLMEGIFGYQ EAPSVSEVAVWFIYLIPALVAFVLPPRAGATASRSV >gi|296918679|gb|GG773021.1| GENE 146 130245 - 131753 1648 502 aa, chain - ## HITS:1 COG:ECs1261 KEGG:ns NR:ns ## COG: ECs1261 COG0591 # Protein_GI_number: 15830515 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Escherichia coli O157:H7 # 1 502 1 502 502 887 99.0 0 MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWL LMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFED KSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGF LAVSWTDTVQASLMIFSLILTPVIVIISVGGFGDSLEVIKQKSIENVDMLKGLNFVAIIS LMGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNEHP AVAGAVNQNAERVFIELAQILFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKA FLRKQASQKELVWVGRVMVLVVALVAIALAANPENRVLGLVSYAWAGFGAAFGPVVLFSV MWSRMTRNGALAGMIIGALTVIVWKQFGWLGLYEIIPGFIFGSIGIVVFSLLGKAPSAAM QKRFAEADAHYHSAPPSRLQEG >gi|296918679|gb|GG773021.1| GENE 147 131912 - 132121 85 69 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C1078 NR:ns ## KEGG: UTI89_C1078 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 69 1 69 69 104 100.0 1e-21 MMLQLCATVLNVTCVASLKMNEMLINEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECN LMKNSVAEH >gi|296918679|gb|GG773021.1| GENE 148 132176 - 136138 4422 1320 aa, chain + ## HITS:1 COG:ZputA_2 KEGG:ns NR:ns ## COG: ZputA_2 COG4230 # Protein_GI_number: 15801003 # Func_class: C Energy production and conversion # Function: Delta 1-pyrroline-5-carboxylate dehydrogenase # Organism: Escherichia coli O157:H7 EDL933 # 526 1320 1 795 795 1526 99.0 0 MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGA ANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPV AEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKAT RDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSG EPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAY MVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLA RQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDL ATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLI YPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIY APVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGL PHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQSLPMLEQSVAAGEM SPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQ MQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNF PLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGA QLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQ VVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVI DSEAKANIERHIQTMRSKGRQVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVF GPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAQVGNLYVNRNMVG AVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALT QPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDE QDALTQLAAVLAVGSQMLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHG DSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG >gi|296918679|gb|GG773021.1| GENE 149 136178 - 136816 609 212 aa, chain - ## HITS:1 COG:ycdC KEGG:ns NR:ns ## COG: ycdC COG1309 # Protein_GI_number: 16128979 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 212 1 212 212 412 99.0 1e-115 MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV EAVTGVTLRDEVFFNQTVENVQRIIIEGIRPR >gi|296918679|gb|GG773021.1| GENE 150 137103 - 138194 912 363 aa, chain + ## HITS:1 COG:ycdM KEGG:ns NR:ns ## COG: ycdM COG2141 # Protein_GI_number: 16128978 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 363 20 382 382 741 99.0 0 MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEF WDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGW QKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGSGKSDFKGDFFTMDDCRVSPQPSV PMKVICAGQSDAGMAFSARYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVL FMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNIN MGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIENFGERIQPLMQCRAHLPALTQ EVA >gi|296918679|gb|GG773021.1| GENE 151 138194 - 138886 720 230 aa, chain + ## HITS:1 COG:ycdL KEGG:ns NR:ns ## COG: ycdL COG1335 # Protein_GI_number: 16128977 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli K12 # 1 230 15 244 244 454 96.0 1e-128 MTTLTARPEAITFDPQQTALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAA RTAGMLIIWFQNGWDEQYVEAGGPGSPNYHKSNALKTMRNQPLLQGKLLAKGSWDYQLVD ELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYF GVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSSTSFARIA >gi|296918679|gb|GG773021.1| GENE 152 138898 - 139284 403 128 aa, chain + ## HITS:1 COG:ycdK KEGG:ns NR:ns ## COG: ycdK COG0251 # Protein_GI_number: 16128976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 128 1 128 128 250 100.0 4e-67 MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIR KVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEI ATIAHIAK >gi|296918679|gb|GG773021.1| GENE 153 139292 - 140092 716 266 aa, chain + ## HITS:1 COG:ycdJ KEGG:ns NR:ns ## COG: ycdJ COG0596 # Protein_GI_number: 16128975 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 266 1 266 266 490 97.0 1e-138 MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLVQEYQVVCYDQRGTGNNPDTLAED YSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAH TRRCFQVREQLLHSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLR RLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMRYGGHACN VTDPETFNALLLNGLASLLHHREAAL >gi|296918679|gb|GG773021.1| GENE 154 140102 - 140692 454 196 aa, chain + ## HITS:1 COG:ECs1254 KEGG:ns NR:ns ## COG: ECs1254 COG0778 # Protein_GI_number: 15830508 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 383 98.0 1e-106 MNEAVSPGALSTLFTDARTHNGWRETPVSDETLREIYALMKWGPTSANCSPARIVFIRTA EGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEET AFRNSSMQAAYLIFACRALGLDTGPMSGFDRQYVDDAFFAGSTLKSNLLINIGYGDSSKL FARLPRLSFEEACGLL >gi|296918679|gb|GG773021.1| GENE 155 140703 - 141197 277 164 aa, chain + ## HITS:1 COG:ECs1253 KEGG:ns NR:ns ## COG: ECs1253 COG1853 # Protein_GI_number: 15830507 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli O157:H7 # 13 164 1 152 152 304 98.0 4e-83 MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVW PVFNENRTLCVNTLSAGQEPLSNLFGGKTPMELRFAAARWQTGVTGCPQLEEALVSFDCR ISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC >gi|296918679|gb|GG773021.1| GENE 156 141218 - 141748 301 176 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 24 163 8 141 447 120 40 8e-26 MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNL SILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACG LVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKNVSASAFDSWMA >gi|296918679|gb|GG773021.1| GENE 157 141748 - 142440 433 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 5 215 204 420 447 171 42 4e-41 MTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAG MTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIA MLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNSVDLSQNGNLIMVAVTL VLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQKP >gi|296918679|gb|GG773021.1| GENE 158 142568 - 142741 81 57 aa, chain - ## HITS:1 COG:STM1121 KEGG:ns NR:ns ## COG: STM1121 COG3729 # Protein_GI_number: 16764478 # Func_class: R General function prediction only # Function: General stress protein # Organism: Salmonella typhimurium LT2 # 1 55 1 55 55 59 92.0 1e-09 MANHRGGSGNFAEDRERASEAGKKGGQHSGGNFKNDPQRASEAGKKGGKSSHGKSDN >gi|296918679|gb|GG773021.1| GENE 159 143114 - 143710 714 198 aa, chain + ## HITS:1 COG:wrbA KEGG:ns NR:ns ## COG: wrbA COG0655 # Protein_GI_number: 16128970 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Escherichia coli K12 # 1 198 1 198 198 349 100.0 2e-96 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPV ATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQ EQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELS IARYQGEYVAGLAVKLNG >gi|296918679|gb|GG773021.1| GENE 160 143757 - 146219 1636 820 aa, chain - ## HITS:1 COG:ftsK KEGG:ns NR:ns ## COG: ftsK COG1674 # Protein_GI_number: 16128857 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Escherichia coli K12 # 1 750 1 737 1329 1175 97.0 0 MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPI HNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVL ALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTG WSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARIL RGALARRKRLAEKFINPMGRQTDAALFSGKRMDDEEEITYTARGVAADPDDVLFSGNRAT QPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPTQPTVAW QPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPVQQPY YAPAPEQSAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQ PQPVEQQPVVEPEPVVEETKPTRPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPI KSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANGGGPRPQVKE GIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQ QDELARQFAQTQQQRYGEQYQHDVPVNTEDADAAAEAELARQFAQTQQQRYSGEQPAGAN PFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQRGGGSESLSVLAKALTN TSSLPSSQIFSAIFSSYPATSKMASAISGDVLRRDAHSPT >gi|296918679|gb|GG773021.1| GENE 161 146354 - 146848 590 164 aa, chain - ## HITS:1 COG:ECs0974 KEGG:ns NR:ns ## COG: ECs0974 COG1522 # Protein_GI_number: 15830228 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 312 100.0 2e-85 MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQG YTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTR VPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR >gi|296918679|gb|GG773021.1| GENE 162 147392 - 148357 725 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 10 317 5 306 306 283 49 6e-75 MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDL TGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYL GLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG FRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL FVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA GTGCMAALDAERYLDGLADAK >gi|296918679|gb|GG773021.1| GENE 163 148480 - 150246 1494 588 aa, chain + ## HITS:1 COG:cydD KEGG:ns NR:ns ## COG: cydD COG4988 # Protein_GI_number: 16128854 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components # Organism: Escherichia coli K12 # 1 588 1 588 588 1073 98.0 0 MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIISQAWFMARILQHMIMENIPRE ALLLPFTLLFLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAG SWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFM ALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTM EVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEF FQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEDLFITSP EGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPES WRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQTALDNAWVSEFLPLLPQGIDTPVG DQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNTASLRQTTLMV THQLEDLADWDVIWVMQDGQIIEQGRYAELSVAGGPFATLLAHRQEEI >gi|296918679|gb|GG773021.1| GENE 164 150247 - 151968 1647 573 aa, chain + ## HITS:1 COG:cydC KEGG:ns NR:ns ## COG: cydC COG4987 # Protein_GI_number: 16128853 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components # Organism: Escherichia coli K12 # 1 573 1 573 573 1045 99.0 0 MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYM LPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELL NRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPL FYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQ SELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGA FQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGIY LQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVP QRVHLFSATLRDNLLLASPGSSDEALAEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGEL RRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMCEKTVLMVTHRLRGLSRFQ QIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL >gi|296918679|gb|GG773021.1| GENE 165 152010 - 152714 389 234 aa, chain + ## HITS:1 COG:aat KEGG:ns NR:ns ## COG: aat COG2360 # Protein_GI_number: 16128852 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Escherichia coli K12 # 1 234 1 234 234 488 99.0 1e-138 MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWS PDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAY HRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCDEFIRH GGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE >gi|296918679|gb|GG773021.1| GENE 166 152999 - 153217 257 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 70 1 70 72 103 65 1e-20 MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY DLSKGRIVFRSR >gi|296918679|gb|GG773021.1| GENE 167 153371 - 153559 75 62 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1205 NR:ns ## KEGG: APECO1_1205 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 62 45 106 106 110 100.0 2e-23 MGWPTNAGSLPYRQLRNVALMRLGVFVRSLPYRQLRKRAVPDNQFCSCSLPYRQLRKNIL EK >gi|296918679|gb|GG773021.1| GENE 168 154259 - 154813 440 184 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0911 NR:ns ## KEGG: ECS88_0911 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 184 15 198 198 368 100.0 1e-101 MDHYLEIRVLPDPEFSSEMLMAALFAKLHRVLGARGQGDIGVSFPDVNVMPGARLRLHGS AQALQALEASTWRKGLTDYCQCSPVTPVPEIKGWRVVSRVQVKSNPQRLLRRSVKKGWLT EEQAIERLATQAEQRTDLPFLNMKSLSSQQLFKLFIRHGDLLKEPVKGEFSSYGLSATAT IPWF >gi|296918679|gb|GG773021.1| GENE 169 154824 - 155825 1066 333 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0910 NR:ns ## KEGG: ECS88_0910 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 333 1 333 333 655 100.0 0 MAKAPVAIKTASVLAFERKLATSDAVMYAGNWQGNEWQPIEIQEKAVRGTISNRLKNAIV SDPTKLDAEIQKANLQRVDVASLPVDTDTLKVVFTLRVLGNLSTPSVCNDMAYQEALSGV IEGYISEHGFKELALRYALNLANGRFLWRNRIGAEQIQVKVTANETSWTFNSHDFSLRQF DQGQAAVTQLAAIIEQGLSAKEWVMLTVEAQVRLGAGQEVFPSQELVLDSNSSKSRVLYQ VAGIAGIHSQKIGNALRTIDTWHPKVDELGAIAVEPYGSVTSRGVACRQPKEKLDFYTLL DNWVTKGMKPDVEQQHYVMAVLIRGGVFGEKSE >gi|296918679|gb|GG773021.1| GENE 170 155836 - 156477 393 213 aa, chain - ## HITS:1 COG:no KEGG:ECED1_0853 NR:ns ## KEGG: ECED1_0853 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 213 95 307 307 458 99.0 1e-128 MHLTVSLLIECNGEITNGEYGRKVLCDYLKMLCQSHKLAGGSIVSMRDPQLFHAPEDEKQ LRKIVWRLMPGYALYDRSEWLAEHHQQHPDISLLDAWLDFAAIKYQAESPAEDNSAKWVY QPKPIPGFLVPLMCGYQRISPVYAPGEVENARDTVTPFAFAEAVYGIGEWRGLHRTTDLQ ALMWRYRTTDTGYYCSATPVVDDFTFNEYDDLE >gi|296918679|gb|GG773021.1| GENE 171 156544 - 156759 263 71 aa, chain - ## HITS:1 COG:no KEGG:ECED1_0853 NR:ns ## KEGG: ECED1_0853 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 71 1 71 307 153 100.0 2e-36 MSYLLLLPHIRIENANAVSGLTWGFPSMTHFLGYVHALSRKVVDEFGVSFDGCAVVSHEQ HIQAYSSGRDF >gi|296918679|gb|GG773021.1| GENE 172 156756 - 158063 804 435 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0907 NR:ns ## KEGG: ECS88_0907 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 435 1 435 435 824 100.0 0 MEKTALIQFITEYIASRRQPKIDAFEKEAAKRVEQGEDASVIAQERQELEARYLPRNWLT DAAKRAGQIKLVTHGAKFSHGDSKASSFYLETSANESYLNTASLANVATDAIGNAAALDV AKLLQTDVNGDSLLASLKRGDYQALSTFAEDKVQLELWVAGFSQAWTTGRPSSHKLAKQI YFPVADGYHLLCPLFSSSLAQAMYEKLTAVRFSEESKAIRDARKAGKWHSQPDIWFPNLA EMHFGGTKPQNISLLNSVRGGRVWLLPSMPPTWATLDRAPQNMRSIFSLRGDFNRAASGI VAQMTYLLKVDINNVHIRTVRAKYIDELIDLLFMQASAFQQEKWQGWSAQSPDLPRHQQL WLDPWRSLSDETFKQEREKNDWQVTVADDFARWLNYRLKKSSFDVGAVEQKEWRSQSLFA QRMREMEAVLQEALK >gi|296918679|gb|GG773021.1| GENE 173 158393 - 161626 1296 1077 aa, chain - ## HITS:1 COG:YPO2467 KEGG:ns NR:ns ## COG: YPO2467 COG1203 # Protein_GI_number: 16122688 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Yersinia pestis # 1 1074 1 1091 1095 1067 52.0 0 MNVLIISRCTKNARVESCRIIDQFAERTGDAAWQTVITLEGVNTLRRLLRKTARRNTAVA CHWLKKNGQTELMWIVGNIRRFNAQGRVPTNRTTQISLVNKEENRWQCAESIALLAAIAG LFHDFGKSGRSFQQSLTQKNTRSYQPYRHEWISLRLFQTFVGERPDDVWLAKLGELTADD ESAILERLQKDTPQFSNSPFSSLQPLAKTVGWLILSHHRMPENLSPQSEQSCKGCESWLE KQLNADWNAVNHRRDDWSQQDFAHVWQFPSGTPLQSASWREKARQIARRASNALGLKTYG QMEQLFPLHMARFCLMLADHYYSSSDAQQKWQDPDYIVWANSDRQSGTLKQRVDEHLVGV AHHAYLLGRQLMHTRASLPAIARHKGFSQRATDVNYRWQDKAWDVARALRERSREEGFFG VNMASTGCGKTFANARIMYALADEREGCRFTVALGLRTLTLQTGDALRSRLGLGEDELAV LIGSAAVNQLWQQEKIDNDCGSASQESPAEEQQFVKYEGSLHTGALEKWLKDDSKLKELV SAPILVSTIDHLISATEGVRGGKQLPAMLRLLTSDLVLDEPDDFDIADLHAVCRLMNWAG MLGTRVLLSSATLPPGLIQALFAAYLAGRKMWQASCGINGRPVNICCAWFDEKDADATQI YDGPGFRDAHAKFVARRAVMLAEKERLHFGRVASVSSASGAIQDVTESVAQTVHTQMLKL HQAHRQRHESGKTVSLGLVRFANINPLVAVTKALIAIPSPEDVCIHYCVYHSRHPLAVRS DIEKRLDRAFTRHNELDFWNNEDIADALHNRPESHHLFVVLGTSVIEVGRDWDADWGIIE PSSMRSIIQFAGRIQRHRRNVPTSENLVILRSNIKSLQKKAPAFCKPGFETKEHLLNSHD ICELIPIADYRTINALPRILSANNANKLAELEHSRLSAELMSSKSKHVVAAQWWRAPLSW NGWMQRQTPFRYSPLPEAVFFLHMDDEESEARFYSRTGDNERKAQGNFRREEVRCASGVA CWGVMDYQHVLLNLADKQSCEIANVGEKFAEVRVPVSEEDAVDDWRYHPWLGVFRNM >gi|296918679|gb|GG773021.1| GENE 174 161623 - 162606 785 327 aa, chain - ## HITS:1 COG:YPO2468 KEGG:ns NR:ns ## COG: YPO2468 COG1518 # Protein_GI_number: 16122689 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Yersinia pestis # 4 319 5 320 328 456 69.0 1e-128 MSSNYLTPSDLKTILHSKRANIYYLEKCRVQVNGGRVEYVTSEGKESYYWNIPIANTTAL MLGMGTSVTQAAMREFAHAGVMVGFCGTDGTPLYSANEVDVDVSWLSPQSEYRPTEYLQQ WVSFWFVEDKRLAAAKRFQLIRLTHIDKHWSSSKMLREHAFQPDVNALHTLLNRTCEEID AAENHTQLMLVEAKLTKALYKMVSQTVGYGDFTRAKRGGGIDMANRFLDQGNYLAYGLAA VAAWVTGIPHGLAVMHGKTRRGGLVFDLADLIKDALVMPQAFIAAMAGEDAQEFRQRCVN IFQQADALDVMITSLQETAQALAKADQ >gi|296918679|gb|GG773021.1| GENE 175 163259 - 165535 1361 758 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 10 741 14 806 815 528 38 1e-148 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH >gi|296918679|gb|GG773021.1| GENE 176 165566 - 165886 316 106 aa, chain - ## HITS:1 COG:ECs0967 KEGG:ns NR:ns ## COG: ECs0967 COG2127 # Protein_GI_number: 15830221 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 106 1 106 106 209 100.0 8e-55 MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA >gi|296918679|gb|GG773021.1| GENE 177 166056 - 166298 56 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSENIFAAAFRADETKPFGIVEPLNSTLFHASTSFANLIQVRWNKPGSERGLFKTSPTLE IQFRELGRAVKHLTGARGQV >gi|296918679|gb|GG773021.1| GENE 178 166209 - 166433 228 74 aa, chain + ## HITS:1 COG:ECs0966 KEGG:ns NR:ns ## COG: ECs0966 COG1278 # Protein_GI_number: 15830220 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 74 1 74 74 145 100.0 2e-35 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH ASVIVPVEVEAAVA >gi|296918679|gb|GG773021.1| GENE 179 166506 - 168452 368 648 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 256 648 7 413 413 146 27 1e-33 MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKA TSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQ RLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSG EEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAVEKVNATGGTEPV VNTASGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMV LADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRY NNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVV GEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGF DSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGV MNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQL FLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE >gi|296918679|gb|GG773021.1| GENE 180 168449 - 169564 1240 371 aa, chain - ## HITS:1 COG:ECs0964 KEGG:ns NR:ns ## COG: ECs0964 COG0845 # Protein_GI_number: 15830218 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 371 10 380 380 640 98.0 0 MKKRKTVKKRYVIAMVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALR KVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEAMLMELRAQRQQAEA ELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTN LDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPG QKAWFTVLGDPLTRYEGQIKDVLPTPEKINDAIFYYARFEVPNPNGLLRLDMTAQVHIQL TDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEV VIGEAKPGAAQ >gi|296918679|gb|GG773021.1| GENE 181 169721 - 170671 652 316 aa, chain + ## HITS:1 COG:ybjX KEGG:ns NR:ns ## COG: ybjX COG2990 # Protein_GI_number: 16128845 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 314 15 328 330 599 99.0 1e-171 MSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMN ELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYL NTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAELTFTLCEYQGKR TMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHI YRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRY EMLDAIQPQMATMFCS >gi|296918679|gb|GG773021.1| GENE 182 170668 - 172326 1138 552 aa, chain - ## HITS:1 COG:ECs0962 KEGG:ns NR:ns ## COG: ECs0962 COG3593 # Protein_GI_number: 15830216 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Escherichia coli O157:H7 # 1 552 1 552 552 1071 99.0 0 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ GFSDVFHRVAQIPENIPMNLRKVISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF SRVLWLARGRAD >gi|296918679|gb|GG773021.1| GENE 183 172752 - 173447 751 231 aa, chain + ## HITS:1 COG:aqpZ KEGG:ns NR:ns ## COG: aqpZ COG0580 # Protein_GI_number: 16128843 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli K12 # 1 231 1 231 231 353 100.0 1e-97 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNG YGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPV TNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD >gi|296918679|gb|GG773021.1| GENE 184 173641 - 173790 62 49 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0896 NR:ns ## KEGG: ECS88_0896 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 49 1 49 49 80 100.0 3e-14 MINSPENMKTQSLQRRFEMRDDTLLKAEGRVKLQLKGNVMHQRGIFNSI >gi|296918679|gb|GG773021.1| GENE 185 173768 - 174667 803 299 aa, chain + ## HITS:1 COG:ybjE KEGG:ns NR:ns ## COG: ybjE COG2431 # Protein_GI_number: 16128842 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 299 17 315 315 476 98.0 1e-134 MFSGLLIILVPLIVGYLIPLRQKAALRVINQLLSWMVYLILFFMGISLAFLDNLASNLLA ILHYSAVSITVILLCNIAALMWLERGLPWRNHHHQEKLPSRIAMALESLKLCGVVVIGFA IGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLI GGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLI PGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA >gi|296918679|gb|GG773021.1| GENE 186 174811 - 176463 2031 550 aa, chain + ## HITS:1 COG:ECs0959 KEGG:ns NR:ns ## COG: ECs0959 COG1151 # Protein_GI_number: 15830213 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Escherichia coli O157:H7 # 1 550 3 552 552 1160 100.0 0 MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINH DVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQL VSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIY AQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATA GKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQ QVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGEDFSAVIAQAQQMA GFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFAT SVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTV EEDMKQLLSA >gi|296918679|gb|GG773021.1| GENE 187 176475 - 177443 856 322 aa, chain + ## HITS:1 COG:ECs0958 KEGG:ns NR:ns ## COG: ECs0958 COG1018 # Protein_GI_number: 15830212 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 # 1 322 1 322 322 655 98.0 0 MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTIS STPGVSEYITLTVRRIDDGVGSRWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAG CGVTPIMSMRRWLAKNRPQADVQVIYNVRTPQDVIFADEWRNYPVTLVAENNVTEGFIAG RLTRELLTRVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLK FTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVISGEYTVSSTMTLTD AEIAEGYVLACSCHPQGDLVLA >gi|296918679|gb|GG773021.1| GENE 188 177576 - 179294 1678 572 aa, chain + ## HITS:1 COG:ECs0957 KEGG:ns NR:ns ## COG: ECs0957 COG0028 # Protein_GI_number: 15830211 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 572 1 572 572 1148 99.0 0 MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEWMSTRHEEVAAFAAGAE AQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQEL FRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLPGDVALKPAPEGATTHWYHAP QPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKELVEFAGKIKAPIVHALRGKEHV EYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPYRVFYPTDAKIIQIDINPASIGA HSKVDMALVGDIKSTLRALLPLVEEKTERKFLDKALEDYRDARKGLDDLAKPSEKAIHPQ YLAQQISHFAADDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQA TEPERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIIVFNNSVLGFVAMEMKAGGYLTDGT ELHDTNFARIAEACGITGIRVEKASEIDEALQRAFSIDGPVLVDVVVAKEELAIPPQIKL EQAKGFSLYMLRAIISGRGDEVIELAKTNWLR >gi|296918679|gb|GG773021.1| GENE 189 179331 - 180332 1159 333 aa, chain + ## HITS:1 COG:ybjU KEGG:ns NR:ns ## COG: ybjU COG2008 # Protein_GI_number: 16128838 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Escherichia coli K12 # 1 333 1 333 333 657 98.0 0 MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQ ANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKI KPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRKRNLALHVDGARIFNAVVAYGCE LKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMTGGGMRQSGILAAAGMY ALKNNVARLQEDHDNATWMAEQLREAGTDVMRQDTNMLFVRVGEENAAALGEYMKARNVL INASPIVRLVTHLDVSRAQLAEVAAHWRAFLAR >gi|296918679|gb|GG773021.1| GENE 190 180343 - 181773 1098 476 aa, chain + ## HITS:1 COG:ECs0955 KEGG:ns NR:ns ## COG: ECs0955 COG0702 # Protein_GI_number: 15830209 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 476 1 476 476 937 97.0 0 MPQRILVLGASGYIGQHLVRTLSQQGHQLLAAARHVDRLAKLQLANVSCHKVDLSWPDNL PALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQS DHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT PIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLLPIPFPTR WISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQPLIAFDDAVRSTLKEEEK LVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSARLQALWRVVNQIGGKERYFFGNIL WQTRALMDLAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLC FTLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIARLAEQSTD >gi|296918679|gb|GG773021.1| GENE 191 181872 - 182885 891 337 aa, chain + ## HITS:1 COG:ybjS KEGG:ns NR:ns ## COG: ybjS COG0451 # Protein_GI_number: 16128836 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 337 13 349 349 706 99.0 0 MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMGAEFVPADLTELVSSQA KVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFD YHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQTRFTILRPQSLFGPHDKVFI PRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPSGRVYNITNGEHR TLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMERLGRKSAKEPPLTHYGVSKLNFDFT LDITRAQEELGYQPVLTLDEGIEKTAAWLRDHGKLPR >gi|296918679|gb|GG773021.1| GENE 192 182882 - 183712 763 276 aa, chain - ## HITS:1 COG:ECs0953 KEGG:ns NR:ns ## COG: ECs0953 COG3023 # Protein_GI_number: 15830207 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Escherichia coli O157:H7 # 1 276 1 276 276 534 97.0 1e-152 MRRVFWLVAAALLLAGCTGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYYIKPENVVAHADIAPQRKDDPGPL FPWKQLAQQGIGAWPDAQRVNFYLAGRAPHTPVETASLLELLARYGYDVKPDMTPREQRR VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD >gi|296918679|gb|GG773021.1| GENE 193 183709 - 184032 476 107 aa, chain - ## HITS:1 COG:ECs0952 KEGG:ns NR:ns ## COG: ECs0952 COG0393 # Protein_GI_number: 15830206 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 187 100.0 4e-48 MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREI AFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR >gi|296918679|gb|GG773021.1| GENE 194 184158 - 184673 455 171 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C0868 NR:ns ## KEGG: UTI89_C0868 # Name: ybjP # Def: putative lipoprotein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 171 9 179 179 342 100.0 5e-93 MRYSKLTMLIPCALLLSACTTVTPAYKDNGPRTGSCVQGGPDSVAQQFYDYRIQHRGNDI TALRPYLSDKLATLLSDASRDNSHRELLSSDPFSSRTTLPDSAHVASASTIPNRDARNIP LRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR >gi|296918679|gb|GG773021.1| GENE 195 184819 - 185619 246 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 23 244 1 215 305 99 29 2e-19 MHNYSVKGIIFDLNSYQTASIRVSMSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGP SGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPH LTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARAL MMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMEN GHIVEQGDASCFTEPQTEAFKNYLSH >gi|296918679|gb|GG773021.1| GENE 196 185637 - 186368 1063 243 aa, chain + ## HITS:1 COG:artI KEGG:ns NR:ns ## COG: artI COG0834 # Protein_GI_number: 16128831 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 243 1 243 243 473 99.0 1e-133 MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIVGFDVDLAQALCKEIDA TCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTTPYYDNSALFVGQQGKYTS VDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAKLDLQNGRIDSVFGDTAVVTE WLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQKLNTALEKVKKDGTYETIYNKW FQK >gi|296918679|gb|GG773021.1| GENE 197 186375 - 187091 878 238 aa, chain + ## HITS:1 COG:artQ KEGG:ns NR:ns ## COG: artQ COG4215 # Protein_GI_number: 16128830 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Escherichia coli K12 # 1 238 1 238 238 425 99.0 1e-119 MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEI LVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVSPFLCGVIALSLLYAAYAS QTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS LISVNDLMLQTKSIATRTQEPFTWYIVAAVIYLVITLLSQYILKRIDLRATRFERRPS >gi|296918679|gb|GG773021.1| GENE 198 187091 - 187759 942 222 aa, chain + ## HITS:1 COG:ECs0944 KEGG:ns NR:ns ## COG: ECs0944 COG4160 # Protein_GI_number: 15830198 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 372 100.0 1e-103 MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPL LVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIPEG QWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLL YGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAFERRN >gi|296918679|gb|GG773021.1| GENE 199 187985 - 188716 865 243 aa, chain + ## HITS:1 COG:artJ KEGG:ns NR:ns ## COG: artJ COG0834 # Protein_GI_number: 16128828 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 243 1 243 243 481 99.0 1e-136 MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQA ECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKT FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTAVVNE WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW FPQ >gi|296918679|gb|GG773021.1| GENE 200 188745 - 189872 1170 375 aa, chain - ## HITS:1 COG:ybjF KEGG:ns NR:ns ## COG: ybjF COG2265 # Protein_GI_number: 16128827 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 375 1 375 375 753 98.0 0 MQCALYDAGRCRSCQWITQPIPEQLSAKTVDLKNLLADFPVEEWCAPVSGPEQGFRNKAK MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG ELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLQEQLPQLKVITVNIQPVHMAIM EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL FCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEV PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMF PHTAHYEVLTLLVKQ >gi|296918679|gb|GG773021.1| GENE 201 189913 - 190401 403 162 aa, chain - ## HITS:1 COG:no KEGG:ECO111_0927 NR:ns ## KEGG: ECO111_0927 # Name: ybjO # Def: putative inner membrane protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 162 1 162 162 290 100.0 1e-77 MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSV QTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQITAASYLWAASLGYGYPEL FSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQLQ >gi|296918679|gb|GG773021.1| GENE 202 190461 - 191306 718 281 aa, chain - ## HITS:1 COG:STM0880 KEGG:ns NR:ns ## COG: STM0880 COG1177 # Protein_GI_number: 16764242 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Salmonella typhimurium LT2 # 1 281 1 281 281 453 94.0 1e-127 MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELLRDDA MMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLS LLLLFVALAHAIGWPTDRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGAT PLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNP EINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQRARRG >gi|296918679|gb|GG773021.1| GENE 203 191303 - 192256 962 317 aa, chain - ## HITS:1 COG:potH KEGG:ns NR:ns ## COG: potH COG1176 # Protein_GI_number: 16128824 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli K12 # 1 317 1 317 317 549 99.0 1e-156 MSTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLAEMA RAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQSLQVAAISTICCLLIGYPL AWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTI LHTNFAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIMPLTKGG IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIV PIMWFHKHQQKSVGEHG >gi|296918679|gb|GG773021.1| GENE 204 192266 - 193399 1431 377 aa, chain - ## HITS:1 COG:ECs0935 KEGG:ns NR:ns ## COG: ECs0935 COG3842 # Protein_GI_number: 15830189 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 765 100.0 0 MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKST LLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDK LPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGAL DKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH PTTRYSAEFIGSVNVFEGVLKERQEDGLVLYSPGLVHPLKVDADASVVDNVPVHVALRPE KIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHVRLKSGQMISAQLQNAHRHRKGLPTWG DEVRLCWEVDSCVVLTV >gi|296918679|gb|GG773021.1| GENE 205 193494 - 194606 1314 370 aa, chain - ## HITS:1 COG:potF KEGG:ns NR:ns ## COG: potF COG0687 # Protein_GI_number: 16128822 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 370 1 370 370 731 99.0 0 MTALNKKWLSGLVAGALMAVSVSTLAAEQKTLHIYNWSDYIAPDTVANFEKETGIKVVYD VFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLV AKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFL DAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICV AIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLL RPDVVAHISDHVFYANANKAATPLVSAEVRDNPGIYPPADVRAKLFTLKVQDPKIDRVRT RAWTKVKSGK >gi|296918679|gb|GG773021.1| GENE 206 194956 - 195432 434 158 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_0925 NR:ns ## KEGG: EcE24377A_0925 # Name: not_defined # Def: TPR repeat-containing protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 158 17 174 174 310 100.0 2e-83 MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAM AEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFV RQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH >gi|296918679|gb|GG773021.1| GENE 207 195520 - 196422 1507 300 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15830186|ref|NP_308959.1| ribosomal protein S6 modification protein [Escherichia coli O157:H7 str. Sakai] # 1 300 1 300 300 585 99 1e-165 MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSIHYKGRKLPHFDA VIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIA HSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAHILVQEYI KEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGGAASVASITPQEREIAIKAARTM ALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGIDIAGKMIRWIERHATTEYCLKTGG >gi|296918679|gb|GG773021.1| GENE 208 196483 - 197205 703 240 aa, chain - ## HITS:1 COG:ECs0931 KEGG:ns NR:ns ## COG: ECs0931 COG0778 # Protein_GI_number: 15830185 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 471 98.0 1e-133 MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQCSSIIRITDKALREEL VTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLLLGVVDTAMMAQNALTAAE SLGLGGVYIGGLRNNIEAVTELLKLPQHVLPLFGLCLGWPADNPDLKPRLPASILVHENS YQPLDKDALAQYDEQLAEYYLTRGSNNRRDTWSDHIRRTIIKESRPFILDYLHKQGWATR >gi|296918679|gb|GG773021.1| GENE 209 197189 - 197476 173 95 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0894 NR:ns ## KEGG: ECO103_0894 # Name: ybjC # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 95 1 95 95 147 97.0 1e-34 MRAIGKLPKSVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA VVVILQVAKRLAPQLMNHPPQYSRSEREKDNDANH >gi|296918679|gb|GG773021.1| GENE 210 197636 - 197893 516 85 aa, chain + ## HITS:1 COG:ECs0929 KEGG:ns NR:ns ## COG: ECs0929 COG0695 # Protein_GI_number: 15830183 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Escherichia coli O157:H7 # 1 85 1 85 85 167 98.0 4e-42 MQTVIFGRPGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVP QIFVDQQHIGGYTDFAAWAKENLDA >gi|296918679|gb|GG773021.1| GENE 211 197923 - 198219 117 98 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0865 NR:ns ## KEGG: ECS88_0865 # Name: ybjM # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 98 28 125 125 171 100.0 1e-41 MKGAFRAAGHPEIGLLFFILPGAVASFFSHRREVLKPLFGAMLAAPCSMLIMRLFFSPTR SFWQELAWLLSAVFWCALGALCFLFISSLFKPQHRKNQ >gi|296918679|gb|GG773021.1| GENE 212 198570 - 200255 1558 561 aa, chain + ## HITS:1 COG:ECs0927 KEGG:ns NR:ns ## COG: ECs0927 COG2985 # Protein_GI_number: 15830181 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 561 1 561 561 1046 100.0 0 MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVLVVSLLLGQQHFSINTD ALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALVIALGLGKLFGWDIGL TAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLSLGYALTYLIGLVSLIVGARY LPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAYRVGPELVAWTDGKNLRELGIYR QTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHARLDPSFRNGKEVFDRDLLDM RIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGD ARRVKTIADRIGFISIHSQVTDLLAFCAFFVIGLMIGMITFQFSTFSFGMGNAAGLLFAG IMLGFMRANHPTFGYIPQGALSMVKEFGLMVFMAGVGLSAGSGINNGLGAIGGQMLIAGL IVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDTARSNIPALGYAGTYA IANVLLTLAGTIIVMVWPGLG >gi|296918679|gb|GG773021.1| GENE 213 200430 - 200966 491 178 aa, chain - ## HITS:1 COG:ybjK KEGG:ns NR:ns ## COG: ybjK COG3226 # Protein_GI_number: 16128814 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 178 1 178 178 341 98.0 3e-94 MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDELLLEAF SRFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLK TVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERIAG >gi|296918679|gb|GG773021.1| GENE 214 201131 - 202258 1110 375 aa, chain + ## HITS:1 COG:ybjJ KEGG:ns NR:ns ## COG: ybjJ COG0477 # Protein_GI_number: 16128813 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 375 28 402 402 613 100.0 1e-175 MASWATRTPAIRDILSVSIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCA LIGMMILSLALWLTSPLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFY SLGTLAGAGVGMALTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEK GVPFYRDIQLLLIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVG RFTGGWFIDRYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTIS AASDTGPDAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKA VAKPDTKTQTAMENS >gi|296918679|gb|GG773021.1| GENE 215 202258 - 203073 922 271 aa, chain + ## HITS:1 COG:ybjI KEGG:ns NR:ns ## COG: ybjI COG0561 # Protein_GI_number: 16128812 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 10 271 1 262 262 516 98.0 1e-146 MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIAN EIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEVEIIACGKNSAYTLKKYDD AMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQVQKALHEAIGDIMVPVHTGN GSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFAMENAGSAVV AAAKYRAGSNNREGVLDVIDKVLKHEAPFNQ >gi|296918679|gb|GG773021.1| GENE 216 203164 - 203424 218 86 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0860 NR:ns ## KEGG: ECS88_0860 # Name: ybjH # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 86 3 88 88 121 100.0 7e-27 MKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVATVPQTVYVAPAPAPAYR PHPYVRHLASVGEGMVIEHQIDDHHH >gi|296918679|gb|GG773021.1| GENE 217 203465 - 204697 1232 410 aa, chain - ## HITS:1 COG:ECs0922 KEGG:ns NR:ns ## COG: ECs0922 COG0477 # Protein_GI_number: 15830176 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 721 100.0 0 MQNKLASGARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTA YLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLC FIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAAL AAISFFGLQRAMPETATRIGEKLSLKELGRDYKLVLKNGRFVAGALALGFVSLPLLAWIA QSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLL VAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLI FTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMVIFLKDKQMGNSHEG >gi|296918679|gb|GG773021.1| GENE 218 204982 - 205578 524 198 aa, chain + ## HITS:1 COG:ECs0921 KEGG:ns NR:ns ## COG: ECs0921 COG0671 # Protein_GI_number: 15830175 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 198 1 198 198 355 99.0 3e-98 MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAAVLWLWGLTAQRQLVIKI AIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWH RLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQ SWYRFCFALPIRKGWVRD >gi|296918679|gb|GG773021.1| GENE 219 205636 - 206394 654 252 aa, chain + ## HITS:1 COG:ECs0920 KEGG:ns NR:ns ## COG: ECs0920 COG1349 # Protein_GI_number: 15830174 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 528 100.0 1e-150 METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLGGYIVLEP RSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAV CYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSK GATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPARMGDLKRFDIVVSDCCPEDEYV KYAQTQRIKLMY >gi|296918679|gb|GG773021.1| GENE 220 206441 - 207664 1239 407 aa, chain - ## HITS:1 COG:ECs0919 KEGG:ns NR:ns ## COG: ECs0919 COG1686 # Protein_GI_number: 15830173 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 # 8 407 1 400 400 794 99.0 0 MDTRVAFMTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVL AEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFL KPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVH GLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDG MKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKP DATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLMEPQLTAPLKKGQVVGT IDFQLNGKSIEQRPLIVMENVEEGGFFGRMWDFVMMKFHQWFGSWFS >gi|296918679|gb|GG773021.1| GENE 221 207890 - 208516 615 208 aa, chain + ## HITS:1 COG:ECs0918 KEGG:ns NR:ns ## COG: ECs0918 COG0625 # Protein_GI_number: 15830172 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 208 3 210 210 400 100.0 1e-112 MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDE SDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRT PPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTW TPRPNLQRWYQQLTERPAVRKVVMIPVS >gi|296918679|gb|GG773021.1| GENE 222 208513 - 209484 773 323 aa, chain - ## HITS:1 COG:ECs0917 KEGG:ns NR:ns ## COG: ECs0917 COG2133 # Protein_GI_number: 15830171 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose/sorbosone dehydrogenases # Organism: Escherichia coli O157:H7 # 1 323 49 371 371 645 98.0 0 MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVG DDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRMVFDGKGYLFIALGENN QRPTAQDLDKLQGKLVRLTDLGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNAL WLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSP AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDKGQRIRDVRTG PDGYLYVLTDESSGELLKVSPRN >gi|296918679|gb|GG773021.1| GENE 223 209739 - 210122 202 127 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_0907 NR:ns ## KEGG: EcE24377A_0907 # Name: bssR # Def: biofilm formation regulatory protein BssR # Organism: E.coli_E24377A # Pathway: not_defined # 1 127 12 138 138 226 100.0 3e-58 MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRDNFFKLNRELHDKSLRL NLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNADKLENCLMSLTLSIQSLQK HAMLEKA >gi|296918679|gb|GG773021.1| GENE 224 210335 - 211660 1840 441 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|183179613|ref|ZP_02957824.1| conserved hypothetical protein [Vibrio cholerae MZO-3] # 9 439 34 464 470 713 76 0.0 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRKICPELTL RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP GDILRVKVEHADEYDLWGSRV >gi|296918679|gb|GG773021.1| GENE 225 211707 - 213035 993 442 aa, chain - ## HITS:1 COG:Z1058_2 KEGG:ns NR:ns ## COG: Z1058_2 COG2199 # Protein_GI_number: 15800584 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 EDL933 # 261 442 1 182 182 366 100.0 1e-101 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYGLKQSVIDTAFAVANIAEYRRSVA IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL FKNGKSVTGDEYNAKNAIFTVSEAMEHFSYLPTGLYVFAYKKDVYFQVCTLIIFFAALVA VISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV DKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECTTVERL KMLADERLYKSKKNGRAQISWQ >gi|296918679|gb|GG773021.1| GENE 226 213043 - 215340 1504 765 aa, chain - ## HITS:1 COG:yliE_2 KEGG:ns NR:ns ## COG: yliE_2 COG2200 # Protein_GI_number: 16128801 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 509 765 1 257 257 530 99.0 1e-150 MAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKN TEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRV IFADFNPSKRPWSMASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVD LNWRYLNEYLDHISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIE KTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMT DLVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERANKLLSLISYDQES GFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDI VTFNADLYLLLCRENVQTFTRKIATVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEK LKLAISSIRNHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRT ILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDD FLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRK QGVRVSIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPV IAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE >gi|296918679|gb|GG773021.1| GENE 227 215568 - 216479 779 303 aa, chain - ## HITS:1 COG:ECs0911 KEGG:ns NR:ns ## COG: ECs0911 COG1173 # Protein_GI_number: 15830165 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 303 1 303 303 562 99.0 1e-160 MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWI APYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGT LLGLLAGYYEGWWDRLSMRICDVLFAFPGILLAIAVVAVLGSGIANVIIAVAIFSIPAFA RLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGTVSSIVVFFTMRIGTSIISAASL SFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPK IKG >gi|296918679|gb|GG773021.1| GENE 228 216482 - 217402 919 306 aa, chain - ## HITS:1 COG:yliC KEGG:ns NR:ns ## COG: yliC COG0601 # Protein_GI_number: 16128799 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli K12 # 1 306 1 306 306 563 100.0 1e-160 MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEADAQVIELVRQQLGLDQP LYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGIIA AVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELGWLPTVGADSWQHYILPSLTL GAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAIN PAIRYK >gi|296918679|gb|GG773021.1| GENE 229 217420 - 217629 288 69 aa, chain - ## HITS:1 COG:ECs0909 KEGG:ns NR:ns ## COG: ECs0909 COG0747 # Protein_GI_number: 15830163 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 69 444 512 512 140 98.0 8e-34 MDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTG FSFEDADLQ >gi|296918679|gb|GG773021.1| GENE 230 217807 - 218970 1220 387 aa, chain - ## HITS:1 COG:ECs0909 KEGG:ns NR:ns ## COG: ECs0909 COG0747 # Protein_GI_number: 15830163 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 386 1 386 512 740 99.0 0 MARAVHRSGLVALGIATALMASCAFAAKEVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQ GLFGLDKEMKLKNVLAESYTVSDDGLTYTVKLREGIKFQDGTDFNAAAVKANLDRASDPA NHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGF HPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQF AFPIPYEQAALLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVK VAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTA QKVLQFTQQQLAQVGIKAQVTAMDAAS >gi|296918679|gb|GG773021.1| GENE 231 218990 - 220861 838 623 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 12 572 8 528 563 327 35 5e-88 MPHSDELDAGDVLAVENLNIAFMQEQHKIAAVRNLSFSLQRGETLAIVGESGSGKSVTAL ALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPV FTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIA MALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVL VMYQGEAVETGSVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQEP PIEQKTVVDGEPVLRVRNLVSRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESG SGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTI GDSILEPLRVHGLLPGKEAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALAL NPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLG QIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAV SLQCVGPGHYVAQPQSEYAFMRR >gi|296918679|gb|GG773021.1| GENE 232 220848 - 221813 1085 321 aa, chain - ## HITS:1 COG:Z1051m KEGG:ns NR:ns ## COG: Z1051m COG1446 # Protein_GI_number: 15804993 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Escherichia coli O157:H7 EDL933 # 1 321 1 321 321 575 98.0 1e-164 MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLVAGESALDVVTEAVRLL EECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHV MMIGEGAENFAFAHGMECVSPEIFSTPLRYEQLLAAREEGATVLDHSGAPLDEKQKMGTV GAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRAL AAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWG YAGDTPTTGIYREKGDTVATQ >gi|296918679|gb|GG773021.1| GENE 233 222017 - 223252 1184 411 aa, chain + ## HITS:1 COG:ECs0905 KEGG:ns NR:ns ## COG: ECs0905 COG0303 # Protein_GI_number: 15830159 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Escherichia coli O157:H7 # 1 411 1 411 411 788 98.0 0 MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDG YAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQT DNGVRFTAEARSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRV ALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEA DSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGN PVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGE LEVTTTGHQGSHIFSSFSLGNCFIVLERERGNVDVGEWVEVEPFNALFGGL >gi|296918679|gb|GG773021.1| GENE 234 223252 - 224001 824 249 aa, chain + ## HITS:1 COG:moeB KEGG:ns NR:ns ## COG: moeB COG0476 # Protein_GI_number: 16128794 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Escherichia coli K12 # 1 249 1 249 249 484 97.0 1e-137 MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLVVGLGGLGCAASQYLASAGVGNLTL LDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAAMIA KHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYHCLSRLF GENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAGYGKPASGKIVMYDAMTCQFREMKLMR NPGCEVCGQ >gi|296918679|gb|GG773021.1| GENE 235 224077 - 224745 821 222 aa, chain - ## HITS:1 COG:ECs0903 KEGG:ns NR:ns ## COG: ECs0903 COG0176 # Protein_GI_number: 15830157 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 222 23 244 244 394 97.0 1e-110 MVMELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLEVVLPQLHEAMGGQGRLFA QVMATTAEGMVNDARKLRSIIADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGL LSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHTPQAKVLAASFKTPRQALDCLL AGGESITLPLDVAQQMISYPAVDAAVAKFEQDWQGAFGRTSI >gi|296918679|gb|GG773021.1| GENE 236 224870 - 225769 899 299 aa, chain + ## HITS:1 COG:ECs0902 KEGG:ns NR:ns ## COG: ECs0902 COG1180 # Protein_GI_number: 15830156 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 584 97.0 1e-167 MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDLLYDPRLCLEGCELCAK TAPEVIEPALNGLLIHREKLTPEHFTALTDCCPTQALTVCGEVKSVEEIMATVLRDKPFY DRSGGGLTLSGGEPFMQPEMAMGLLQASHEAGIHTAVETCLHVPWKYIAPSLSYIDLFLA DLKHVADAPFKQWTDGNAARVLDNLKKLAAAGKKIIIRVPLIQGFNADETSVKAITDFAA DELHVSEIHFLPYHTLGINKYHLLNLPYDAPEKPLDAPELLDFAQQYACQKGLTATLRG >gi|296918679|gb|GG773021.1| GENE 237 225775 - 228207 2851 810 aa, chain + ## HITS:1 COG:ybiW KEGG:ns NR:ns ## COG: ybiW COG1882 # Protein_GI_number: 16128791 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 1 810 1 810 810 1692 99.0 0 MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHLDKPIPVRRALALAHHL ANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFAVSEENKRVL HEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMTSGDAHLAVNFPLLLEKGLDG LREKVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSEHIERFAALAREMAATETRESRR DELLTIAENCDLIAHQPPQTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRD VELNQTLDREHAIEMLHSCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGQPM DAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVI PEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLAALEGGRDATSGK VFLPQEKALSAGNFNNFDEVMDAWDTQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVD DCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFD GLTHEQLRQRLINGAPKYGNDDDTVDTLLARAYQTYIDELKQYHNPRYGRGPIGGNYYAG TSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGG VLLNQKLNPATLENESDKQKLMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDL VVRVAGYSAFFTALSPDAQDDIIARTEHML >gi|296918679|gb|GG773021.1| GENE 238 228353 - 229168 902 271 aa, chain + ## HITS:1 COG:ECs0899 KEGG:ns NR:ns ## COG: ECs0899 COG0561 # Protein_GI_number: 15830153 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 270 1 270 271 535 98.0 1e-152 MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIEFVVASGNQYYQLISFFPELKD EISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPE AFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHIALDGIMKPVTSGF GFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMSNAAENIK QIARYATDDNNHEGALNVIQAVLENKPPFNL >gi|296918679|gb|GG773021.1| GENE 239 229368 - 230960 1940 530 aa, chain - ## HITS:1 COG:ECs0897 KEGG:ns NR:ns ## COG: ECs0897 COG0488 # Protein_GI_number: 15830151 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 530 1 530 530 1053 100.0 0 MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL DPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLE VKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLD EPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS SRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKST LLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRS ILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMA LELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYLRSKGIE >gi|296918679|gb|GG773021.1| GENE 240 231179 - 232099 1051 306 aa, chain + ## HITS:1 COG:ECs0896 KEGG:ns NR:ns ## COG: ECs0896 COG1376 # Protein_GI_number: 15830150 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 599 100.0 1e-171 MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEY QMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTV IVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPM GLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKA TTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSG MPVRLN >gi|296918679|gb|GG773021.1| GENE 241 232157 - 233275 999 372 aa, chain - ## HITS:1 COG:ECs0895 KEGG:ns NR:ns ## COG: ECs0895 COG0471 # Protein_GI_number: 15830149 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 371 1 371 372 607 98.0 1e-173 MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHTIITLSGLMLLTKGVEL SGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVALFIVVPLTITLKRLCEIPV NRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFIAQMAPLAGAMMLTLLLLCWC CFPGKALQYHTGVQTPEWKPRLVWSCLGLYIVFLTALELKQELWGLVIVAAGFALLARRV VLSVDWTLLLVFMAMFIDVHLLTQLPVLQGVLSNVSHLSEPGLWLTAIGLSQVISNVPST ILLLNYVPPSLLLAWAVNVGGFGLLPGSLANLIALRMANDRRIWWRFHLYSIPMLLWAAL VGYVLLVMIPAG >gi|296918679|gb|GG773021.1| GENE 242 233272 - 233739 561 155 aa, chain - ## HITS:1 COG:ybiQ KEGG:ns NR:ns ## COG: ybiQ COG1321 # Protein_GI_number: 16128785 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Escherichia coli K12 # 1 155 1 155 155 268 100.0 2e-72 MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQVDM AARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLG VSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK >gi|296918679|gb|GG773021.1| GENE 243 233925 - 234053 65 42 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E2532 NR:ns ## KEGG: SbBS512_E2532 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 42 1 42 42 69 97.0 4e-11 MNEFKRCMRVFSHSPFKVRLMLLSMLCDMVNNKPQQDKPSDK >gi|296918679|gb|GG773021.1| GENE 244 234325 - 235908 1453 527 aa, chain + ## HITS:1 COG:ybiP KEGG:ns NR:ns ## COG: ybiP COG2194 # Protein_GI_number: 16128783 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 527 1 527 527 1068 99.0 0 MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTAAFTAILLLLWRTLPRV QKVLVGISSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGIFIF ALGVIAIRRKKESEKARWNTFDSLCLVFSVATFFVAPVQNLAWGGVFKLKDTGYPVFRFA KDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQTYVVVIGESARRDALGAFGGHWD NTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFS NQGQIGEYDTAIASIAKRADEVYFLKEGNFEADKNTKDEALLDMTAQVLAQEHSQPQLIV LHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDNLLRKLYDQLRNSGSSFSLVYF SDHGLAFKERGKDVQYLAHDDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQW TGIKAKEINIKYPFISEKKAGPIYITNFQLQKVDYNHLGTDIFDPKP >gi|296918679|gb|GG773021.1| GENE 245 235987 - 236502 518 171 aa, chain - ## HITS:1 COG:ECs0892 KEGG:ns NR:ns ## COG: ECs0892 COG3637 # Protein_GI_number: 15830146 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Escherichia coli O157:H7 # 1 171 1 171 171 301 100.0 4e-82 MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKMGGFNLKYRYEEDNSPL GVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTEYPT YKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF >gi|296918679|gb|GG773021.1| GENE 246 236855 - 237742 792 295 aa, chain + ## HITS:1 COG:ECs0891 KEGG:ns NR:ns ## COG: ECs0891 COG5006 # Protein_GI_number: 15830145 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 481 100.0 1e-135 MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVGAPGVTALRLALGTLILIAFFK PWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSSRRPV DFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACWAIYILSGQRAGAEHGPATVA IGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILSTALPYSLEMIALTRLPTRTFGT LMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAASMGSTLTVRKESKIKELDIN >gi|296918679|gb|GG773021.1| GENE 247 238041 - 238544 605 167 aa, chain + ## HITS:1 COG:ECs0890 KEGG:ns NR:ns ## COG: ECs0890 COG0783 # Protein_GI_number: 15830144 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 305 100.0 3e-83 MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFI AVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKE LADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE >gi|296918679|gb|GG773021.1| GENE 248 238948 - 239694 975 248 aa, chain + ## HITS:1 COG:ECs0889 KEGG:ns NR:ns ## COG: ECs0889 COG0834 # Protein_GI_number: 15830143 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 462 100.0 1e-130 MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKE LKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANN NDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDT PNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYK KWFGTEPK >gi|296918679|gb|GG773021.1| GENE 249 239876 - 240535 932 219 aa, chain + ## HITS:1 COG:ECs0888 KEGG:ns NR:ns ## COG: ECs0888 COG0765 # Protein_GI_number: 15830142 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 373 100.0 1e-103 MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIE VIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGF REAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI IAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL >gi|296918679|gb|GG773021.1| GENE 250 240532 - 241254 594 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 233 47 9e-60 MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV DGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGANKEEAEKLAREL LAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQ DLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNPPSQRLQEFLQHVS >gi|296918679|gb|GG773021.1| GENE 251 241371 - 243596 1970 741 aa, chain + ## HITS:1 COG:ECs0886_2 KEGG:ns NR:ns ## COG: ECs0886_2 COG0668 # Protein_GI_number: 15830140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 431 741 1 311 311 582 100.0 1e-166 MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQKKAAYGALADVLDNDT SRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEVSRHYGEALSARFGQLYRN ITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKNRERSNW LQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVL RLIFCPNVAELRPFTIHDETARYWSRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANV IIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAFALVWHWLASAYFIVLFF FSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPELQKRLN GWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVG WTVLASLIENRLASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPL LAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVR QDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVAELMENEEIR GLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTY QVLPAPGATPAEPLPPGEPTL >gi|296918679|gb|GG773021.1| GENE 252 243593 - 244519 793 308 aa, chain - ## HITS:1 COG:ybiN KEGG:ns NR:ns ## COG: ybiN COG3129 # Protein_GI_number: 16128775 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Escherichia coli K12 # 1 308 28 335 335 636 99.0 0 MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALL AHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPL IGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRRQKESGAIFNGIIHKNEQYD ATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEES KGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQR RRFVNRQR >gi|296918679|gb|GG773021.1| GENE 253 244795 - 245055 234 86 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_0784 NR:ns ## KEGG: ECIAI39_0784 # Name: ybiM # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 86 49 134 134 165 100.0 6e-40 MKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDKLAEKAR EQGAKGYVINSAGGNDQMFGTAIIYK >gi|296918679|gb|GG773021.1| GENE 254 245320 - 247602 1966 760 aa, chain + ## HITS:1 COG:fiu KEGG:ns NR:ns ## COG: fiu COG4774 # Protein_GI_number: 16128773 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for monomeric catechols # Organism: Escherichia coli K12 # 1 760 1 760 760 1390 99.0 0 MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQANADDTLVVEASTPSLYAPQQSA DPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYM RGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRND SGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDS DYNDSTTDTATMRFEHDINDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWT WSRTANTKDVSNKILTNQTNLTSTFYTGAIGHDVSTGVEFTRETQTNYGVNPVTLPAVNI YHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATA CGGSGRGAITCPAGVAKGSPVTTVDTAKSGNLVNWKAGALYHLTENGNIYINYAVSQQPP GGNNFALAQSGSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQN DDGTYSQYGKKRVEGYEISVAGNITPAWQMIGGYTQQKATIKNGKDVAQDGSSSLPYTPE HAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLD FQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF >gi|296918679|gb|GG773021.1| GENE 255 247818 - 248495 702 225 aa, chain + ## HITS:1 COG:ybiX KEGG:ns NR:ns ## COG: ybiX COG3128 # Protein_GI_number: 16128772 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated protein # Organism: Escherichia coli K12 # 1 225 13 237 237 456 99.0 1e-128 MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQQVDTRSALYAALQNEV LNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVRSHPQNGWMRTDLSATLFL SDPESYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCVTPVTRGVRVASFMWIQSMIR DDKKRAMLFELDNNIQSLKSRYGESEEILSLLNLYHNLLREWSEI >gi|296918679|gb|GG773021.1| GENE 256 248569 - 248835 274 88 aa, chain + ## HITS:1 COG:ECs0881 KEGG:ns NR:ns ## COG: ECs0881 COG1734 # Protein_GI_number: 15830135 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 159 98.0 2e-39 MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGAPIPQARREAIPGVRLC IHCQQEKDLQKPAYTGYNRRGSKDSQLR >gi|296918679|gb|GG773021.1| GENE 257 249100 - 249360 323 86 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0838 NR:ns ## KEGG: ECO103_0838 # Name: ybiJ # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 86 1 86 86 82 100.0 4e-15 MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAA AAGASGYSITSATNNNKLSGTAVIYK >gi|296918679|gb|GG773021.1| GENE 258 249588 - 250673 1384 361 aa, chain - ## HITS:1 COG:ECs0879 KEGG:ns NR:ns ## COG: ECs0879 COG2055 # Protein_GI_number: 15830133 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 361 1 361 361 721 98.0 0 MVSGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAGHDSHGIGMIPSYVRSW SQGHLQINHHAKVVKEAGAAVTLDGDRAFGQVAAHEAMALGIEKARQHGIAAVALHNSHH IGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRFGTNPFCVVFPRKDNFPLLLD YATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAVMQESPLGSLLTFAEHKGYALA AMCEILGGALSGGKTTHQETLQTSPDAILNCMTTIIINPELFGAPDCSAQTEAFAEWVKA SPHDDDKPILLPGEWEVNTRRERQEQGIPLDAGSWQAICDAARQIGMPEETLQAFCQQLA S >gi|296918679|gb|GG773021.1| GENE 259 250814 - 251776 1038 320 aa, chain - ## HITS:1 COG:ybiB KEGG:ns NR:ns ## COG: ybiB COG0547 # Protein_GI_number: 16128768 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 320 1 320 320 640 99.0 0 MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNSEVPDLELGGVLIALRIKGEGEAEML GFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSED PTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNS AHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP QINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCL MATGEAATISDGLARVNQAF >gi|296918679|gb|GG773021.1| GENE 260 251804 - 253954 1937 716 aa, chain - ## HITS:1 COG:ECs0877 KEGG:ns NR:ns ## COG: ECs0877 COG1199 # Protein_GI_number: 15830131 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Escherichia coli O157:H7 # 1 716 1 716 716 1436 99.0 0 MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGK TLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVC PRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAID DDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDP KNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAI PERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLR GLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWA TREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFREQVESKKHLGMLVL FASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDL KGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRS HGCWGEVVIYDKRLLTKNYGKRLLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR >gi|296918679|gb|GG773021.1| GENE 261 254064 - 254258 113 64 aa, chain + ## HITS:1 COG:ybiA KEGG:ns NR:ns ## COG: ybiA COG3236 # Protein_GI_number: 16128766 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 64 97 160 160 105 85.0 2e-23 MRKALRAKFEQHAELRTLLRATASAKLVEHTQNDAYWGDGGNGQGKNRLGYLLMALRGQL AAEK >gi|296918679|gb|GG773021.1| GENE 262 254566 - 255894 1421 442 aa, chain - ## HITS:1 COG:rhlE KEGG:ns NR:ns ## COG: rhlE COG0513 # Protein_GI_number: 16128765 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli K12 # 1 438 1 439 454 770 97.0 0 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGRGQGGGRGQQQPRRTESGAKSGN AKPAEKPSRRLGDAKPAGGLAS >gi|296918679|gb|GG773021.1| GENE 263 256123 - 256794 719 223 aa, chain + ## HITS:1 COG:ECs0874 KEGG:ns NR:ns ## COG: ECs0874 COG1309 # Protein_GI_number: 15830128 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 223 5 227 227 436 99.0 1e-122 MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYL ACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSK FISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDASDTRMILHTHALIGEILAFR LGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL >gi|296918679|gb|GG773021.1| GENE 264 256797 - 257792 1288 331 aa, chain + ## HITS:1 COG:Z1015 KEGG:ns NR:ns ## COG: Z1015 COG0845 # Protein_GI_number: 15800546 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 EDL933 # 1 331 2 332 332 551 99.0 1e-157 MKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVD EGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQ AAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDI AQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPV WVRAYVDERNLDQAQPGRKVLLYTDGRPNKPYHGQIGFVSPTAEFTPKTVETPDLRTDLV YRLRIVVTDADDALRQGMPVTVQFGDEAGHE >gi|296918679|gb|GG773021.1| GENE 265 257785 - 259521 343 578 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 330 549 12 233 318 136 34 1e-30 MNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPD SGSATVIGFDPIKNDAALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFA RLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQM VHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPTALTQTMAGRSFLMTSPHE GNRKLLQRALKLPQVSDGMIQGKSVRLILKKETTPDDIRHADGMPEIDINETTPRFEDAF IDLLGGAGTSESPLGAILHTVEGTPGETVIEAKELTKKFGDFAATDHVNFAVKRGEIFGL LGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVE QNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPD ILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEAEYCDRIGLVYRGKLIAS GTPDDLKAQSANDEQPDPTMEQAFIQLIHDWDKEHSNE >gi|296918679|gb|GG773021.1| GENE 266 259514 - 260647 1375 377 aa, chain + ## HITS:1 COG:ECs0871 KEGG:ns NR:ns ## COG: ECs0871 COG0842 # Protein_GI_number: 15830125 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 678 99.0 0 MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILL EQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANAT APIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQ HFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAA FLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLIVNVLFLIAS AVMFIGLTWLKIKRRLD >gi|296918679|gb|GG773021.1| GENE 267 260658 - 261764 1039 368 aa, chain + ## HITS:1 COG:ECs0870 KEGG:ns NR:ns ## COG: ECs0870 COG0842 # Protein_GI_number: 15830124 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 1 368 1 368 368 686 100.0 0 MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEH SVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLI LDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLI AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAI GIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSG YVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAY AMFRRKVM >gi|296918679|gb|GG773021.1| GENE 268 261726 - 262136 506 136 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0809 NR:ns ## KEGG: ECS88_0809 # Name: ybhQ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 136 1 136 136 215 100.0 5e-55 MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGLCALYCVTVVMMLVFQR HPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFVLAIAGLAILAGPAVVSLLA KDKKLHHLTSKHRVRR >gi|296918679|gb|GG773021.1| GENE 269 262269 - 263030 608 253 aa, chain + ## HITS:1 COG:ECs0868 KEGG:ns NR:ns ## COG: ECs0868 COG3568 # Protein_GI_number: 15830122 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 520 100.0 1e-147 MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLH VENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKR GVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWR QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALPLRTWRH LSDHAPLSAEIHL >gi|296918679|gb|GG773021.1| GENE 270 263027 - 264268 1191 413 aa, chain + ## HITS:1 COG:ECs0867 KEGG:ns NR:ns ## COG: ECs0867 COG1502 # Protein_GI_number: 15830121 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli O157:H7 # 1 413 1 413 413 828 99.0 0 MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFEDDVGKQLHAALLAAAQ RGVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLFGMRTNVFRRMHRKIVVID ARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDILQFELENLPGQSAARRWWRRH HKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQARREVIIANAYFFPGYRFLHAL RKAARRGVRIKLIIQGEPDMPIVRVGAHLLYNYLVKGGVQVFEYRRRPLHGKVALMDDHW ATVGSSNLDPLSLSLNLEANVIIHDRNFNQTLRDNLNGIIAADCQQVDETMLPKRTWWNL TKSVLAFHFLRHFPALVGWLPAHTPRLAQVGPPAQPTMETQDRVETENTGVKP >gi|296918679|gb|GG773021.1| GENE 271 264268 - 265224 1099 318 aa, chain + ## HITS:1 COG:ybhN KEGG:ns NR:ns ## COG: ybhN COG0392 # Protein_GI_number: 16128756 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 318 1 318 318 525 98.0 1e-149 MSKSHPRWRLAKKLLTWLFFIAVIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVV SYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPG STITRIFSLSITTNWLGYILLAGVIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVYLW FCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVSYFFVVGVL LVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGTIIAALLAYRVLYYFIPLLLALICY LLLESQAKKLRAKNEAAM >gi|296918679|gb|GG773021.1| GENE 272 265260 - 265973 170 237 aa, chain - ## HITS:1 COG:ybhM KEGG:ns NR:ns ## COG: ybhM COG0670 # Protein_GI_number: 16128755 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 237 1 237 237 390 92.0 1e-109 MESYSQNSNKVDFQHEARILNGIWLITALGLVATAGLAWGAKYLEITATKYDSPQMYVAI GLLLLSMYGLSKDINKINTAIAGVIYLFLISLVAIVVASLAPVSAIIVVFSTAGSMFLIS MLAGLLFKFDPGSHRFIIMMTLTGLALVIIVNATLMSERPIWVISCLMIVLWSGIISHGR NKLLELTGKSHSEELWSPVRCAFVGALTLYYYFIGFFGILATIAITLVWQRHTRFFH >gi|296918679|gb|GG773021.1| GENE 273 266179 - 266883 759 234 aa, chain - ## HITS:1 COG:ybhL KEGG:ns NR:ns ## COG: ybhL COG0670 # Protein_GI_number: 16128754 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 234 1 234 234 368 100.0 1e-102 MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAANSAAVMELLFTNRVFLI GLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSSIFIVYTAASIASTFVVTA GMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVIVFVG LTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRIFGNRR >gi|296918679|gb|GG773021.1| GENE 274 267020 - 267472 629 150 aa, chain - ## HITS:1 COG:moaE KEGG:ns NR:ns ## COG: moaE COG0314 # Protein_GI_number: 16128753 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Escherichia coli K12 # 1 150 1 150 150 288 99.0 2e-78 MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVKALTLEHYPGMTE KALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKT RAPFWKREATPEGDRWVEARESDQQAAKRW >gi|296918679|gb|GG773021.1| GENE 275 267474 - 267719 275 81 aa, chain - ## HITS:1 COG:ECs0862 KEGG:ns NR:ns ## COG: ECs0862 COG1977 # Protein_GI_number: 15830116 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, small subunit # Organism: Escherichia coli O157:H7 # 1 81 1 81 81 144 97.0 4e-35 MINVLFFAQVRELVGTDATEVAADFPTVEALRQHLAAQSDRWALALEDGKLLAAVNQTLV SFDHSLTDGDEVAFFPPVTGG >gi|296918679|gb|GG773021.1| GENE 276 267712 - 268197 676 161 aa, chain - ## HITS:1 COG:ECs0861 KEGG:ns NR:ns ## COG: ECs0861 COG0315 # Protein_GI_number: 15830115 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Escherichia coli O157:H7 # 1 161 1 161 161 296 100.0 9e-81 MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARI AGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAAS VAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEADD >gi|296918679|gb|GG773021.1| GENE 277 268200 - 268712 618 170 aa, chain - ## HITS:1 COG:ECs0860 KEGG:ns NR:ns ## COG: ECs0860 COG0521 # Protein_GI_number: 15830114 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Escherichia coli O157:H7 # 1 170 1 170 170 341 100.0 4e-94 MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQ VSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRMLSFEEIGTSTLQ SRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTRPCNFHPHLKK >gi|296918679|gb|GG773021.1| GENE 278 268734 - 269723 638 329 aa, chain - ## HITS:1 COG:ECs0859 KEGG:ns NR:ns ## COG: ECs0859 COG2896 # Protein_GI_number: 15830113 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 677 99.0 0 MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFA SLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVANWRDAGLTGI NVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNW IQHRPIQLRFIELMETGEGIELFRKHHISGQVLRNELLRRGWIHQLRQRSDGPAQVFCHP DYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARI SAALREKKQTHFLHQNNTGITQNLSYIGG >gi|296918679|gb|GG773021.1| GENE 279 270120 - 271028 891 302 aa, chain + ## HITS:1 COG:ECs0858 KEGG:ns NR:ns ## COG: ECs0858 COG0391 # Protein_GI_number: 15830112 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 302 1 302 302 540 99.0 1e-153 MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAW GDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRN LLKVDAHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTAPIQELLLTPNVPATREAVHAI SEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKL AIMEQYVGKKVIDAVIVGPKEDVSAVKERIVIQEVLEASDIPYRHDRQLLHSALEKALQA LG >gi|296918679|gb|GG773021.1| GENE 280 271066 - 273087 2218 673 aa, chain - ## HITS:1 COG:ECs0857 KEGG:ns NR:ns ## COG: ECs0857 COG0556 # Protein_GI_number: 15830111 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Escherichia coli O157:H7 # 1 673 1 673 673 1265 100.0 0 MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD QLHQLRELFIAAS >gi|296918679|gb|GG773021.1| GENE 281 273666 - 274343 471 225 aa, chain - ## HITS:1 COG:bioD KEGG:ns NR:ns ## COG: bioD COG0132 # Protein_GI_number: 16128746 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Escherichia coli K12 # 1 225 1 225 225 419 96.0 1e-117 MSKCYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPKGLRNSDALALQ RNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIEALVMSAGLRALEQQADWVLVEGAGG WFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQAILHAGLTLAGWVANDVTP PGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKCINLALM >gi|296918679|gb|GG773021.1| GENE 282 274336 - 275091 581 251 aa, chain - ## HITS:1 COG:bioC KEGG:ns NR:ns ## COG: bioC COG0500 # Protein_GI_number: 16128745 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 251 1 251 251 450 98.0 1e-126 MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTRVLDAGCGPGWMSRRW RERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLS TALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNAVHY QHYIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLT YHLFLGVIARE >gi|296918679|gb|GG773021.1| GENE 283 275078 - 276232 944 384 aa, chain - ## HITS:1 COG:ECs0854 KEGG:ns NR:ns ## COG: ECs0854 COG0156 # Protein_GI_number: 15830108 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Escherichia coli O157:H7 # 1 384 1 384 384 661 96.0 0 MIWQEKIDAALDARRVADALRRRYPVAQGAGRWLVADDCQYLNFSSNDYLGLSHHPQIIR AWQQGADQFGVGSGGSGHVSGYSVAHQVLEEELAEWLGYSRALLFISGFAANQAVIAAMM AKEDRIVADRLSHASLLEAASLSPSPLRRFAHNDVTHLARLLASPCPGQQLVVTEGVFSM DGDSAPLEEIQQVTQQHDGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGV SGAAVLCSNTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALIT RFRAGVQDLPFTLAGSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARL RLTLTAAHEMQDIDRLLEVLHGNG >gi|296918679|gb|GG773021.1| GENE 284 276229 - 277269 1185 346 aa, chain - ## HITS:1 COG:bioB KEGG:ns NR:ns ## COG: bioB COG0502 # Protein_GI_number: 16128743 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Escherichia coli K12 # 1 346 1 346 346 692 99.0 0 MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYC PQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGV KAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKV REAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDA FDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDK DLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL >gi|296918679|gb|GG773021.1| GENE 285 277413 - 278645 1203 410 aa, chain + ## HITS:1 COG:ECs0852 KEGG:ns NR:ns ## COG: ECs0852 COG0161 # Protein_GI_number: 15830106 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Escherichia coli O157:H7 # 1 410 20 429 429 816 99.0 0 MTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM FGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLT FRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFA CEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAA ANASLAILESGDWQHQVAAIEAQLREQLAPACDAEMVADVRVLGAIGVVETTRPVNMAAL QKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ >gi|296918679|gb|GG773021.1| GENE 286 278704 - 279180 478 158 aa, chain + ## HITS:1 COG:ECs0851 KEGG:ns NR:ns ## COG: ECs0851 COG1881 # Protein_GI_number: 15830105 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 312 99.0 1e-85 MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPVGTKSFVVTCYDPDAPTGSG WWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTV HALDVERIDVDEGASGAMVGFNVHFHSLASASITAMFS >gi|296918679|gb|GG773021.1| GENE 287 279332 - 280615 1353 427 aa, chain + ## HITS:1 COG:ybhC KEGG:ns NR:ns ## COG: ybhC COG4677 # Protein_GI_number: 16128740 # Func_class: G Carbohydrate transport and metabolism # Function: Pectin methylesterase # Organism: Escherichia coli K12 # 1 427 1 427 427 816 99.0 0 MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFA SLTPGAAAWNPSPITLPAQPDFVVGPAGAQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPG EYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWY MYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDKV QINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEF RVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNASGDGVAQLGRSLDVDANTNGQVVIR DSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEVQRNLNDTNYNRMWEYNNRGVGSK VVAEAKK >gi|296918679|gb|GG773021.1| GENE 288 280756 - 283017 2144 753 aa, chain - ## HITS:1 COG:ybhJ KEGG:ns NR:ns ## COG: ybhJ COG1048 # Protein_GI_number: 16128739 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 753 9 761 761 1536 98.0 0 MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDS LASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGG IFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDI DYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGSISVDLSAIKPMIA LPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGC SGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAF CGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLK VCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAG NVSELADMFARIKQIAGQEHVDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIA EEYATKRYRSNVINWGMLPLQMAEVPNFDVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP VTEITLYMESLTAEEREIIKAGSLINFNKNRQM >gi|296918679|gb|GG773021.1| GENE 289 283200 - 283685 506 161 aa, chain - ## HITS:1 COG:ECs0798 KEGG:ns NR:ns ## COG: ECs0798 COG0471 # Protein_GI_number: 15830052 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 161 317 477 477 275 98.0 4e-74 MVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSII VRYFFASGSAYIVAMLPVFAMLENVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFG VGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML >gi|296918679|gb|GG773021.1| GENE 290 283692 - 284633 1029 313 aa, chain - ## HITS:1 COG:ybhI KEGG:ns NR:ns ## COG: ybhI COG0471 # Protein_GI_number: 16128738 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli K12 # 1 313 1 313 477 511 99.0 1e-145 MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIA VAASMVVVGNLSGGEFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKI GSTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLM MSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVI YTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAI VVMATMLLLGIVT >gi|296918679|gb|GG773021.1| GENE 291 284709 - 285761 794 350 aa, chain - ## HITS:1 COG:ybhH KEGG:ns NR:ns ## COG: ybhH COG2828 # Protein_GI_number: 16128737 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 350 1 350 350 676 99.0 0 MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKV AIISRSSDPHADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVR IRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQ IDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGL GDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIV PSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP >gi|296918679|gb|GG773021.1| GENE 292 286065 - 286898 537 277 aa, chain + ## HITS:1 COG:ybhD KEGG:ns NR:ns ## COG: ybhD COG0583 # Protein_GI_number: 16128736 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 277 62 338 338 575 99.0 1e-164 MEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACI PTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFT PLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWF YEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLS PAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG >gi|296918679|gb|GG773021.1| GENE 293 286939 - 287934 999 331 aa, chain - ## HITS:1 COG:ybhE KEGG:ns NR:ns ## COG: ybhE COG2706 # Protein_GI_number: 16128735 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Escherichia coli K12 # 1 331 1 331 331 677 99.0 0 MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRV LAYRIAPDDGALTFAAESALPGSPTHISTDHLGQFVFVGSYNAGNVSVTRLEDGLPVGVV DVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHIS VYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH >gi|296918679|gb|GG773021.1| GENE 294 288089 - 288907 879 272 aa, chain + ## HITS:1 COG:ECs0794 KEGG:ns NR:ns ## COG: ECs0794 COG0561 # Protein_GI_number: 15830048 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 272 1 272 272 554 99.0 1e-158 MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALD TPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGH VIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELG LECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAM GNADDAVKARANIVIGDNTTDSIAQFIYSHLI >gi|296918679|gb|GG773021.1| GENE 295 288908 - 289966 1175 352 aa, chain - ## HITS:1 COG:ECs0793 KEGG:ns NR:ns ## COG: ECs0793 COG4148 # Protein_GI_number: 15830047 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 352 1 352 352 665 99.0 0 MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGR VLNDAEKGICLSPEKRRVGYVFQDARLFPHYKVRGNLRYGMAKSMVNQFDKLVALLGIEP LLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINI PMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVL EHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKV VNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA >gi|296918679|gb|GG773021.1| GENE 296 289969 - 290658 599 229 aa, chain - ## HITS:1 COG:ECs0792 KEGG:ns NR:ns ## COG: ECs0792 COG4149 # Protein_GI_number: 15830046 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 366 98.0 1e-101 MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPV VVGYLLLVSMGRRGFIGERLYDWFGLSFAFSWRGAVLAAAVMSFPLMVRAIRLALESVDI KLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRT IPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR >gi|296918679|gb|GG773021.1| GENE 297 290658 - 291431 825 257 aa, chain - ## HITS:1 COG:ECs0791 KEGG:ns NR:ns ## COG: ECs0791 COG0725 # Protein_GI_number: 15830045 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 257 1 257 257 462 99.0 1e-130 MARKWLNLFTGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSF ASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQTLLGNSLVVVAPKASEQK DFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGAL ALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYL KGPQAAEIFKRYGFTTK >gi|296918679|gb|GG773021.1| GENE 298 291598 - 291747 131 49 aa, chain - ## HITS:1 COG:no KEGG:ECSE_0815 NR:ns ## KEGG: ECSE_0815 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 49 3 51 51 77 100.0 2e-13 MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH >gi|296918679|gb|GG773021.1| GENE 299 291876 - 292664 814 262 aa, chain + ## HITS:1 COG:ECs0789 KEGG:ns NR:ns ## COG: ECs0789 COG2005 # Protein_GI_number: 15830043 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 449 99.0 1e-126 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSE HILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISR FSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAVTAQSGARLGLDEGKEVLI LLKAPWVGITQDDAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATS LQQGQNVTAYFNADSVIIATLC >gi|296918679|gb|GG773021.1| GENE 300 292732 - 294204 178 490 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 276 465 21 199 311 73 28 2e-11 MSSLQILQGTFRLGDTKTLQLPRLTLNAGDSWAFVGSNGSGKSALARALSGELPLLKGER QSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVKDAPRCMQLA QQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQHLAELLAS LHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSELLEGV QMPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKS TLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTTVRNVIL SGYFDSIGIYQAVSDRQQKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHP TLLILDEPLQGLDPLNRQLIRRFVDVLISEGKTQLLFVSHHAEDAPACITHRLEFVPDGD FYRYALTKIN >gi|296918679|gb|GG773021.1| GENE 301 294467 - 295483 1026 338 aa, chain + ## HITS:1 COG:ECs0787 KEGG:ns NR:ns ## COG: ECs0787 COG1087 # Protein_GI_number: 15830041 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 700 99.0 0 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP VGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA DGHVVAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYW ADASKANHELNWRVTRTLDEMAQDTWHWQSRHPQGYPD >gi|296918679|gb|GG773021.1| GENE 302 295493 - 296539 769 348 aa, chain + ## HITS:1 COG:ECs0786 KEGG:ns NR:ns ## COG: ECs0786 COG1085 # Protein_GI_number: 15830040 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 702 99.0 0 MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVR VTGDKNPDYTGTYVFTNDFAALMSDTPDAPESNDPLMRCQSARGTSRVICFSPDHSKTLP ELSVAALTEIVKTWQEQTAELGETYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAE REDRLQKEYFAAQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH VLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV >gi|296918679|gb|GG773021.1| GENE 303 296543 - 297691 1118 382 aa, chain + ## HITS:1 COG:ECs0785 KEGG:ns NR:ns ## COG: ECs0785 COG0153 # Protein_GI_number: 15830039 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 773 99.0 0 MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRD DRKVRVMAADYENQLDEFSLDAPIVAHENYQWANYVRGVVKHLQLRNNSFGGVDMVISGN VPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISAL GKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTLVGSEYNTRREQCETGARFFQQP ALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTVEAASALEQGDLKRMGELMAESHAS MRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGGGFGGCIVALFPEELVPAVQQAVAEQY EAKTGIKETFYVCKPSQGAGQC >gi|296918679|gb|GG773021.1| GENE 304 297685 - 298725 1155 346 aa, chain + ## HITS:1 COG:galM KEGG:ns NR:ns ## COG: galM COG2017 # Protein_GI_number: 16128724 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli K12 # 1 346 1 346 346 707 99.0 0 MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPLSDGSVREALLGCASPE CYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQ NDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITYRATVDKPCPVNMTNHVYFNL DGEQSDVRNHKLQILAEEYLPVDEGGIPHDGLKSVAGTSFDFRNAKIIASEFLADDDQRK VKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYTTAPALQFYSGNFLGGTPSRGTEPY ADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEEYSSLTEYQFIAQ >gi|296918679|gb|GG773021.1| GENE 305 298928 - 299680 1196 250 aa, chain + ## HITS:1 COG:ECs0783 KEGG:ns NR:ns ## COG: ECs0783 COG0588 # Protein_GI_number: 15830037 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 470 100.0 1e-133 MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVL KRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFA VTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVI IAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYLGNADEIAAKA AAVANQGKAK >gi|296918679|gb|GG773021.1| GENE 306 299847 - 300899 1039 350 aa, chain - ## HITS:1 COG:ECs0782 KEGG:ns NR:ns ## COG: ECs0782 COG0722 # Protein_GI_number: 15830036 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 1 350 1 350 350 714 99.0 0 MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGP CSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQIN DGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLS CPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPN YSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVM VESHLVEGNQSLESGEPLAYGKSITDACIGWDDTDALLRQLANAVNARRG >gi|296918679|gb|GG773021.1| GENE 307 301215 - 301595 363 126 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0769 NR:ns ## KEGG: ECS88_0769 # Name: ybgS # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 126 1 126 126 150 100.0 2e-35 MKMTKLATLFLTATLSLASGAALAADSGAQSNNGQANAAADAGQVAPDARENVAPNNVDN NGVNTGSDGTMLHPDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTK TDGTTQ >gi|296918679|gb|GG773021.1| GENE 308 301709 - 302650 846 313 aa, chain + ## HITS:1 COG:ZybgR KEGG:ns NR:ns ## COG: ZybgR COG1230 # Protein_GI_number: 15800461 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Escherichia coli O157:H7 EDL933 # 4 307 2 305 311 526 99.0 1e-149 MAHSHSHASSHLPEDNNARRLLYAFGVTAGFMLVEVIGGFLSGSLALLADAGHMLTDTAA LLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVE GGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIWT GWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPVSLDIAELKRRLCREIPEVRNVH HVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYLMDHYQIEHATIQMEYQPCHGPDCH LNEGVSGHSHHHH >gi|296918679|gb|GG773021.1| GENE 309 302647 - 303351 611 234 aa, chain - ## HITS:1 COG:ECs0779 KEGG:ns NR:ns ## COG: ECs0779 COG3201 # Protein_GI_number: 15830033 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Escherichia coli O157:H7 # 1 234 6 239 239 391 99.0 1e-109 MQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEKISNYFFGLINVTLFGIIFFQI QLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIRWLPLPKALSWLAVCVVSIGLMTV FINPVFAFLTRVAVMIMQALGLQVAMPELQPDAFPFWDSCMMVLSIVAMILMTRKYVENW LLWVIINVISVVIFALQGVYAMSLEYIILTFIALNGSRMWINSARERGSRALSH >gi|296918679|gb|GG773021.1| GENE 310 303404 - 304447 647 347 aa, chain - ## HITS:1 COG:nadA KEGG:ns NR:ns ## COG: nadA COG0379 # Protein_GI_number: 16128718 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Escherichia coli K12 # 1 347 1 347 347 682 98.0 0 MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVMVAHYYTDPEIQQLAEE TGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEKTILMPTLQAECSLDLGCP VEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIDHLDSLGEKIIWAPDKH LGCYVQKQTGADILCWQGACIVHDEFKTQALTRLQEEYPDAAILVHPESPQAIVEMADAV GSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPDKELLEAPTAGEGATCRSCAHCPWM AMNGLQAIAEALELEGSNHEVYVDERLLERALVPLNRMLDFAATLRG >gi|296918679|gb|GG773021.1| GENE 311 305601 - 306131 365 176 aa, chain - ## HITS:1 COG:ECs0777 KEGG:ns NR:ns ## COG: ECs0777 COG1729 # Protein_GI_number: 15830031 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 176 88 263 263 288 98.0 3e-78 MERQKQILLQIDSLSSGGAAAQSTSGDQSGVAASTTPTADAGTANAGAPVKSGDANTDYN AAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVV KNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM >gi|296918679|gb|GG773021.1| GENE 312 306412 - 306933 709 173 aa, chain - ## HITS:1 COG:ECs0776 KEGG:ns NR:ns ## COG: ECs0776 COG2885 # Protein_GI_number: 15830030 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 295 99.0 4e-80 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARL QMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLVY >gi|296918679|gb|GG773021.1| GENE 313 306968 - 308260 1257 430 aa, chain - ## HITS:1 COG:ECs0775 KEGG:ns NR:ns ## COG: ECs0775 COG0823 # Protein_GI_number: 15830029 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Escherichia coli O157:H7 # 1 430 1 430 430 820 100.0 0 MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAA DLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVD TGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPY ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQ NLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAK QDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQ VKFPAWSPYL >gi|296918679|gb|GG773021.1| GENE 314 308393 - 309586 1193 397 aa, chain - ## HITS:1 COG:tolA KEGG:ns NR:ns ## COG: tolA COG3064 # Protein_GI_number: 16128714 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane protein involved in colicin uptake # Organism: Escherichia coli K12 # 1 397 20 421 421 257 79.0 2e-68 MLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDE QRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAA KAAADAKAKAEADAKAAEEAAKKAAADAKKKAEAEAAKAAVEAQKKAEAAAAALKKKAEA AEAAAAEARKKAATEAAEKAKAEAEKKAAAEKAAADKKAAADKKAAEKAAAEKAAADKKA AAEKAAADKKAAAAKAAAEKAAAAKAAAEADDIFGELSSGKNAPKTGGGAKGNNASPAGS GNTKNNGASGADINNYAGQIKSAIESKFYDASSYAGKTCTLRIKLAPDGMLLDIKPEGGD PALCQAALAAAKLAKIPKPPSQAVYEVFKNAPLDFKP >gi|296918679|gb|GG773021.1| GENE 315 309708 - 310136 462 142 aa, chain - ## HITS:1 COG:ECs0773 KEGG:ns NR:ns ## COG: ECs0773 COG0848 # Protein_GI_number: 15830027 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Escherichia coli O157:H7 # 11 142 11 142 142 207 100.0 4e-54 MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSND NPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEI IKALNLLHSAGVKSVGLMTQPI >gi|296918679|gb|GG773021.1| GENE 316 310140 - 310823 707 227 aa, chain - ## HITS:1 COG:ECs0772 KEGG:ns NR:ns ## COG: ECs0772 COG0811 # Protein_GI_number: 15830026 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Escherichia coli O157:H7 # 1 227 4 230 230 410 99.0 1e-115 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS RLYQESQGKRDNLSGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTVSESNKG >gi|296918679|gb|GG773021.1| GENE 317 310829 - 311119 182 96 aa, chain - ## HITS:1 COG:ECs0771 KEGG:ns NR:ns ## COG: ECs0771 COG0824 # Protein_GI_number: 15830025 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Escherichia coli O157:H7 # 1 96 39 134 134 177 100.0 3e-45 MLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVN AENTLLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ >gi|296918679|gb|GG773021.1| GENE 318 311383 - 311676 223 97 aa, chain - ## HITS:1 COG:ECs0770 KEGG:ns NR:ns ## COG: ECs0770 COG3790 # Protein_GI_number: 15830024 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 169 100.0 1e-42 MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCA GVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF >gi|296918679|gb|GG773021.1| GENE 319 311676 - 311789 135 37 aa, chain - ## HITS:1 COG:STM0742 KEGG:ns NR:ns ## COG: STM0742 COG4890 # Protein_GI_number: 16764112 # Func_class: S Function unknown # Function: Predicted outer membrane lipoprotein # Organism: Salmonella typhimurium LT2 # 1 36 1 36 37 57 86.0 5e-09 MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI >gi|296918679|gb|GG773021.1| GENE 320 311804 - 312943 1476 379 aa, chain - ## HITS:1 COG:ECs0769 KEGG:ns NR:ns ## COG: ECs0769 COG1294 # Protein_GI_number: 15830023 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Escherichia coli O157:H7 # 1 379 1 379 379 699 100.0 0 MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGN QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWD WGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMI ITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAA SNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLA CIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYW KMFGRITKEDIERNTHSLY >gi|296918679|gb|GG773021.1| GENE 321 312959 - 314527 1865 522 aa, chain - ## HITS:1 COG:ECs0768 KEGG:ns NR:ns ## COG: ECs0768 COG1271 # Protein_GI_number: 15830022 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Escherichia coli O157:H7 # 1 522 2 523 523 1011 100.0 0 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR >gi|296918679|gb|GG773021.1| GENE 322 315857 - 316882 611 341 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0755 NR:ns ## KEGG: ECS88_0755 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 341 31 371 371 633 99.0 1e-180 MTLQRNGAQSVSGTTNASGSVNLGSTFADDQDALLIVKKEGYSNLVVKCSCAGMTYAISP AMTSLDGMRVVLSWGEKPFDLDSHLIFPGGHIYFDSKEGTDANLDVDDTDSYGSETVTIS KKHFGESYIYAVQDYSNKGLPNSNYLSASKAKVFVYVGSSLVRSYSVPAGKRGNIWTVFK LNPNGEFEDINSVTSANFNDTTLGVRDLATVIMPATGSSTPASPAMQNSGDTQLARKYNR EGEAVYKTGQLEQAIQLFQQATELDGNYGQAFSNLGLAYQKNGNIAEAIWANRKAISLAS GANAATTRANSYYNIAKIYETAGQDADALQHYQLALHDAIL >gi|296918679|gb|GG773021.1| GENE 323 317212 - 318081 966 289 aa, chain - ## HITS:1 COG:ECs0754 KEGG:ns NR:ns ## COG: ECs0754 COG0074 # Protein_GI_number: 15830008 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 508 100.0 1e-144 MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREA VAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI GPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGG DPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAP KGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK >gi|296918679|gb|GG773021.1| GENE 324 318081 - 319247 1458 388 aa, chain - ## HITS:1 COG:ECs0753 KEGG:ns NR:ns ## COG: ECs0753 COG0045 # Protein_GI_number: 15830007 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 728 100.0 0 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGV KVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRR VVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKI FMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDP REAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTE AFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKK LADSGLNIIAAKGLTDAAQQVVAAVEGK >gi|296918679|gb|GG773021.1| GENE 325 319341 - 320558 1672 405 aa, chain - ## HITS:1 COG:STM0737 KEGG:ns NR:ns ## COG: STM0737 COG0508 # Protein_GI_number: 16764107 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Salmonella typhimurium LT2 # 1 405 1 402 402 716 96.0 0 MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAV LEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRR LLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAPAPAAQPALAARSEKRVP MTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVK AVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIK ELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNG QVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV >gi|296918679|gb|GG773021.1| GENE 326 320573 - 323374 2708 933 aa, chain - ## HITS:1 COG:ECs0751 KEGG:ns NR:ns ## COG: ECs0751 COG0567 # Protein_GI_number: 15830005 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Escherichia coli O157:H7 # 1 933 1 933 933 1944 100.0 0 MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHS QTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKV ADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEE KRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLK EMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMG FSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAV TGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIF HVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKH PTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHE WDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLA YATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLS EEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPH GYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKS LLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDV AIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLR YAGRPASASPAVGYMSVHQKQQQDLVNDALNVE >gi|296918679|gb|GG773021.1| GENE 327 323735 - 324451 672 238 aa, chain - ## HITS:1 COG:ECs0749 KEGG:ns NR:ns ## COG: ECs0749 COG0479 # Protein_GI_number: 15830003 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 495 100.0 1e-140 MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVC GSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPY LLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYR FLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA >gi|296918679|gb|GG773021.1| GENE 328 324467 - 326233 2089 588 aa, chain - ## HITS:1 COG:ECs0748 KEGG:ns NR:ns ## COG: ECs0748 COG1053 # Protein_GI_number: 15830002 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1153 100.0 0 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI PTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQ ESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAM AKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAH SRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY >gi|296918679|gb|GG773021.1| GENE 329 326233 - 326580 487 115 aa, chain - ## HITS:1 COG:ECs0747 KEGG:ns NR:ns ## COG: ECs0747 COG2142 # Protein_GI_number: 15830001 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Escherichia coli O157:H7 # 1 115 1 115 115 148 99.0 3e-36 MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVF TLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV >gi|296918679|gb|GG773021.1| GENE 330 326574 - 326978 237 134 aa, chain - ## HITS:1 COG:ECs0746 KEGG:ns NR:ns ## COG: ECs0746 COG2009 # Protein_GI_number: 15830000 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Escherichia coli O157:H7 # 6 134 1 129 129 219 98.0 1e-57 MWALFMIRNVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSP EGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFV ITVVFSLLAGVLVW >gi|296918679|gb|GG773021.1| GENE 331 327359 - 327466 59 35 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0704 NR:ns ## KEGG: EC55989_0704 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 35 18 52 52 65 100.0 6e-10 MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV >gi|296918679|gb|GG773021.1| GENE 332 327499 - 327684 120 61 aa, chain - ## HITS:1 COG:no KEGG:ECP_0732 NR:ns ## KEGG: ECP_0732 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 61 3 63 63 123 98.0 3e-27 MYQPFKVSLAPYCVRLPELKFAFAHQPGFTRLLFGSPLCERGENLGTELWALAGKGSIDD E >gi|296918679|gb|GG773021.1| GENE 333 327672 - 328955 1498 427 aa, chain + ## HITS:1 COG:gltA KEGG:ns NR:ns ## COG: gltA COG0372 # Protein_GI_number: 16128695 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Escherichia coli K12 # 1 427 1 427 427 901 100.0 0 MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFI DGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITR LFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYS IGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVR TAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFR LMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYP NVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYEKRD FKSDIKR >gi|296918679|gb|GG773021.1| GENE 334 329103 - 329477 288 124 aa, chain + ## HITS:1 COG:no KEGG:JW5098 NR:ns ## KEGG: JW5098 # Name: ybgO # Def: predicted fimbrial-like adhesin protein # Organism: E.coli_J # Pathway: not_defined # 1 124 230 353 353 236 94.0 3e-61 MIDLGKFNLLDIRRHTMSKTFSIKTTKSQNDQCTDGFKVSSSFYTEKTLVEEDKALLIGN GLKLRILDENASPYTFNKYAEYADFTSDMLIYEKTYTAELSSTPGTPIAAGPFDTVVLFK INYN >gi|296918679|gb|GG773021.1| GENE 335 329629 - 330675 916 348 aa, chain + ## HITS:1 COG:abrB KEGG:ns NR:ns ## COG: abrB COG3180 # Protein_GI_number: 16128690 # Func_class: R General function prediction only # Function: Putative ammonia monooxygenase # Organism: Escherichia coli K12 # 1 348 16 363 363 526 98.0 1e-149 MPVLQWGMLCVLSLLLSIGFLALHLPAALLLGPMIAGIIFSMRGVTLQLPRSAFLAAQAI LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQQIVWFPPVS INLLLTILLAVVAGTAGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA >gi|296918679|gb|GG773021.1| GENE 336 330672 - 331463 647 263 aa, chain - ## HITS:1 COG:nei KEGG:ns NR:ns ## COG: nei COG0266 # Protein_GI_number: 16128689 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Escherichia coli K12 # 1 263 1 263 263 535 97.0 1e-152 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKSYQSRLIGQHVTHVETRGKALLTHFS NDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTILLYSASDIEMLTPEQLTTH PFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEILWQVG LTGNHKAKDLNAAQLDALAHALLDTPRLSYATRGQVDENKYHGALFRFKVFHRDGEPCER CGGIIEKTTLSSRPFYWCPGCQH >gi|296918679|gb|GG773021.1| GENE 337 331499 - 332233 599 244 aa, chain - ## HITS:1 COG:ECs0738 KEGG:ns NR:ns ## COG: ECs0738 COG1540 # Protein_GI_number: 15829992 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 427 93.0 1e-120 MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACVREAIKNGVAIGAHPSF PDRENFGRSAMQLPPETVFAQTLYQIGALAAITRAQGGVMCHVKPHGMLYNQAAKEAQLA DAIARAVYACDPALILVGLAGSELIRAGERYGLVTREEVFADRGYQADGSLVPRSQPGAL IENEEQALAQTLEMVQYGRVKSITGEWAMVTAQTVCLHGDGEHALAFARRLRATFAEKGI VVAA >gi|296918679|gb|GG773021.1| GENE 338 332223 - 333155 969 310 aa, chain - ## HITS:1 COG:ECs0737 KEGG:ns NR:ns ## COG: ECs0737 COG1984 # Protein_GI_number: 15829991 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 633 99.0 0 MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLVGNDANAPALEITLGQL TVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMRAGQRLTLKRPQHGMRSYLAVAGGID VPPVMGSCSTDLKVGIGGLEGRLLRDGDRLPIGKAKRDFMEAQGVKQLLWGNRIRALPGP EYHEFDRASQDAFWRSPWQLSSQSNRMGYRLQGQILKRTTDRELLSHGLLPGVVQVPHNG QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALKARQDQQRYFE QLAWRLHNEN >gi|296918679|gb|GG773021.1| GENE 339 333149 - 333805 546 218 aa, chain - ## HITS:1 COG:ECs0736 KEGG:ns NR:ns ## COG: ECs0736 COG2049 # Protein_GI_number: 15829990 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Escherichia coli O157:H7 # 1 218 1 218 218 411 98.0 1e-115 MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILRNP ESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAAGPDLAVVAAHCGLSEKQVVELH SSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLHVPAGSVGIGGPQTGVYPLATPGG WQLIGHTSLSLFDPERDEPILLRPGDSVRFVPQKEGVC >gi|296918679|gb|GG773021.1| GENE 340 333828 - 334571 876 247 aa, chain - ## HITS:1 COG:ECs0735 KEGG:ns NR:ns ## COG: ECs0735 COG0327 # Protein_GI_number: 15829989 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 499 100.0 1e-141 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAV IVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITV MGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFID SAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTF IDIPNPA >gi|296918679|gb|GG773021.1| GENE 341 334842 - 336323 1773 493 aa, chain + ## HITS:1 COG:ybgH KEGG:ns NR:ns ## COG: ybgH COG3104 # Protein_GI_number: 16128684 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 493 1 493 493 915 99.0 0 MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYSDNHAYELFSAYCSLVYV TPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSN VSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGFAQEEYSWAMGFGLAAVGMIA GLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYAL IVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVN RDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFC ILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYML LSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALACVGLVLMIWLYQ ALKFRNRALALES >gi|296918679|gb|GG773021.1| GENE 342 336365 - 337783 929 472 aa, chain - ## HITS:1 COG:ECs0733 KEGG:ns NR:ns ## COG: ECs0733 COG0415 # Protein_GI_number: 15829987 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Escherichia coli O157:H7 # 1 471 1 471 472 922 94.0 0 MTTHLVWFRQDLRQHDNLALAAACRNSSARVLALYIATPRQWAAHNVSPRQAELINTQLN ALQNALAEKGIPLLFREVDDFAASVETVKQVCAENRITHLFYNYQYEVNERARDVQAERT LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKFRSSGS IEPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSA SLATGGLSPRQCLHRLLAEQPQVLEGGPGSVWLNELIWREFYRHLMTYYPSLCKHRPFIA WTDRVQWQSNPAHLKAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDREGEFIRQWL PELRDVPGKAVHEPWKWAEKTGVTLDYPQPIVDHKEARLRTLAAYEEARKGA >gi|296918679|gb|GG773021.1| GENE 343 337780 - 338289 314 169 aa, chain - ## HITS:1 COG:ybgA KEGG:ns NR:ns ## COG: ybgA COG3272 # Protein_GI_number: 16128682 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 169 1 169 169 298 94.0 2e-81 MNQQLFDDSTLIRIFALHELHNLKDRGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVA DIHRWQSLDDYYNQYRQRVIVLLSHPANRRDHTNVLMHVQGYFRPHIDSTERQQLAALID SYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRVINLRHAGVL >gi|296918679|gb|GG773021.1| GENE 344 338417 - 338623 245 68 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0734 NR:ns ## KEGG: ECS88_0734 # Name: ybfA # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 68 1 68 68 123 100.0 2e-27 MELYKEYPAWLIFLRRTCAVAAGVLALPFMLFWKDRARFYSYLHRVWSKTSDKPVWMDQA EKATGDFY >gi|296918679|gb|GG773021.1| GENE 345 338822 - 339025 88 67 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0733 NR:ns ## KEGG: ECS88_0733 # Name: kdpF # Def: potassium ion accessory transporter subunit # Organism: E.coli_S88 # Pathway: Two-component system [PATH:ecz02020] # 1 67 1 67 67 91 100.0 1e-17 MAFAIFILFLHHARRFLRNLCSQNSTLPVSLLGHWRCTVSAGVITGVLLVFLLLGYLVYA LINAEAF >gi|296918679|gb|GG773021.1| GENE 346 339025 - 340698 1910 557 aa, chain + ## HITS:1 COG:kdpA KEGG:ns NR:ns ## COG: kdpA COG2060 # Protein_GI_number: 16128674 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Escherichia coli K12 # 1 557 1 557 557 962 97.0 0 MAAQGFLLIATFLLVFMVLARPLGSGLARLINDIPLPGTTGVERVLFSALGVSDREMNWK QYLSAILGLNILGLAVLFFMLLGQHYLPLNPQQLPGLSWDLALNTAVSFVTNTNWQSYSG ETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSMNTLGNAWVDLLRITLWVLTP VALLIALFFIQQGALQNFLPYQAVTTIEGAQQLLPMGPVASQEAIKMLGTNGGGFFNANS SHPFENPTALTNFVQMLAIFLIPTALCFAFGEVAGDRRQGRMLLWAMSVIFVICVGVVMW AEVQGNPHLLALGADSSINMEGKESRFGVLVSSLFAVVTTAASCGAVIAMHDSFTALGGM VPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALA ILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPF WNCLLALCMFVGRFGVIIPVMAIAGSLVSKKSQPASSGTLPTHGPLFVGLLIGTVLLVGA LTFIPALALGPVAEYLS >gi|296918679|gb|GG773021.1| GENE 347 340721 - 342769 2335 682 aa, chain + ## HITS:1 COG:ECs0725 KEGG:ns NR:ns ## COG: ECs0725 COG2216 # Protein_GI_number: 15829979 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Escherichia coli O157:H7 # 1 682 1 682 682 1239 98.0 0 MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSLLTTCISIAMASDVMPG NALFSAAISGWLWVTVLFANFAEALAEGRSKAQANSLKGVKKTAFARKLREPKYGAAADK VPADQLRKGDIVLVEASDIIPCDGEVIEGGASVDESAITGESAPVIRESGGDFASVTGGT RILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLW PFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGD VDVLLLDKTGTITLGNRQASEFIPAQGVEEKALADAAQLASLADETPEGRSIVILAKQRF NLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPADVDQKV DQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAA IAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQ AAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYP QLNALNIMRLHSPDSAILSAVIFNALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLG GLLVPFIGIKVIDLLLTVCGLV >gi|296918679|gb|GG773021.1| GENE 348 342778 - 343350 486 190 aa, chain + ## HITS:1 COG:ECs0724 KEGG:ns NR:ns ## COG: ECs0724 COG2156 # Protein_GI_number: 15829978 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 329 96.0 2e-90 MRGLRPALSTFLFLLLITGGVYPLLTTALGQWWFPWQANGSLIREGDTVRGSALIGQNFT GNGYFHGRPSATAEMPYNPQASGGSNLAVSNPELDKQIAARVAALRAANPDASTNVPVEL VTASASGLDNNITPQAAAWQIPRVAKARNLSVEQLTQLIAKYSQQPLVKYIGQPVVNIVE LNLALDRLDE >gi|296918679|gb|GG773021.1| GENE 349 343343 - 346027 2240 894 aa, chain + ## HITS:1 COG:kdpD KEGG:ns NR:ns ## COG: kdpD COG2205 # Protein_GI_number: 16128671 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Escherichia coli K12 # 1 894 1 894 894 1752 99.0 0 MNNEPLRPDPDRLLEQAAAPHRGKLKVFFGACAGVGKTWAMLAEAQRLRAQGLDIVVGVV ETHGRKDTAAMLKGLAVLPLKRQAYRGRHISEFDLDAALARRPALILMDELAHSNAPGSR HPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGIQVRETVPDPFFDAADDVVLV DLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIALRELALRRTADRVDEQMRAWRGH PGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASRLGSVWHAVYVETPALHRLPEKKRR AILSALRLAQELGAETATLSDPAEEKAVVRYAREHNLGKIILGRPASRRWWRRETFADRL ARIAPDLDQVLVALDEPPARTINNAPDSRSFKDKWRVQIQGCVVAAALCAVITLIAMQWL IAFDAANLVMLYLPGVVVVALFYGRWPSVVATVINVVSFDLFFIAPRGTLAVSDVQYLLT FAVMLTVGLVIGNLTAGVRYQARVARYREQRTRHLYEMSKALAVGRSSQDIAATSEQFIA STFHARSQVLLPDDNGKLQPLTHPQGMTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQIL PLKSGEKTYGLVVVEPGNLRQLMIPEQQRLLETFTLLVTNALERLTLTASEEQARMASER EQIRNALLAALSHDLRTPLTVLFGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNN LLDMARIQSGGFNLKKEWLTLEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFER VLINLLENAVKYAGAQAEIGINAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKES AVPGVGLGLAICRAIVDVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM >gi|296918679|gb|GG773021.1| GENE 350 346099 - 346701 660 200 aa, chain + ## HITS:1 COG:kdpE KEGG:ns NR:ns ## COG: kdpE COG0745 # Protein_GI_number: 16128670 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 199 26 224 225 386 99.0 1e-107 MRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEES DKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATTTPDPLVKFSDVTVDLAARVIHR GEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQ DPARPRHFITETGIGYRFMP >gi|296918679|gb|GG773021.1| GENE 351 346994 - 347131 75 45 aa, chain - ## HITS:1 COG:no KEGG:EFER_2417 NR:ns ## KEGG: EFER_2417 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 45 1 45 72 85 97.0 9e-16 MLKVRETCTLGCPLVRRLAGIKEMKVKTITMGKLHDMGCPPYMRH >gi|296918679|gb|GG773021.1| GENE 352 347390 - 349588 1947 732 aa, chain + ## HITS:1 COG:ECs0721 KEGG:ns NR:ns ## COG: ECs0721 COG1982 # Protein_GI_number: 15829975 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 732 1 732 732 1523 97.0 0 MSELKIAVSRSCPDCFSTHRECVNIDKSNYIDVAAIILSVNDVERGKLDEIDATGYGIPV FIATENEERVPAEYLPRISGVFEHCESRKEFYGRQLETAASHYETQLRPPFFRALVDYVN QGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEMLFRSDLCNADVAMGDLLIHEGAPCIAQ QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV YLETARNPYGFIGGIDAHCFEESYLRELITEVAPQRAKEARPFRLAVIQLGTYDGTIYNA RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLELNENDPGILVTQSVHKQQAGF SQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPFYPLFAALDINAKMHEGVSGRNM WMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFKFVPGEHWHS FEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNSIL FLLTPAEDMAKLQQLVALLVRFEKLLEADAPLAEVLPSIYKQHEERYAGYTLRQLCQEMH DLYARHNVKQLQKEMFRKEHFPRVSMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPY PPGVLCVVPGEIWGGAVLRYFSALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPR DAQSALLKGEKL >gi|296918679|gb|GG773021.1| GENE 353 349585 - 350904 1614 439 aa, chain + ## HITS:1 COG:potE KEGG:ns NR:ns ## COG: potE COG0531 # Protein_GI_number: 16128668 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 439 1 439 439 767 99.0 0 MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIISWLVTAVGSMALAWAFA KCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELLGASLS PVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIPVVGLCIIGWFWFSPTLYVDS WNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVENPERNVPIAVLGGTLGAAVIYIV STNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKVIMALMVMSCCGSLLGWQFTIAQVF KSSADEGYFPKIFSRVSKVDAPVQGMLTIVIIQSGLSLMTISPSLNSQFNVLVNLAVVTN IIPYILSMAALVIIQKVANVPPSKAKVANFVAFVGAMYSFYALYSSGEEAMLYGSIVTFL GWTLYGLVSPRFELKNKHG >gi|296918679|gb|GG773021.1| GENE 354 350961 - 352601 1936 546 aa, chain - ## HITS:1 COG:pgm KEGG:ns NR:ns ## COG: pgm COG0033 # Protein_GI_number: 16128664 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Escherichia coli K12 # 1 546 1 546 546 1080 99.0 0 MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAARHSFNEPH ILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPT PAISNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDRANAL LADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADIVDMAAIQKAGLTLGVDPMGGSG IEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLA FANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQHRPQWGKDVAVGKTLVSSAMIDRVVN DLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAE ITAVTGKNPQEHYNELAKRFGAPSYNRLQAAATSAQKAALSKLSPEMVSASTLAGDPITA RLTAAPGNGASIGGLKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVEIVS EVLKNA >gi|296918679|gb|GG773021.1| GENE 355 352627 - 353172 456 181 aa, chain - ## HITS:1 COG:seqA KEGG:ns NR:ns ## COG: seqA COG3057 # Protein_GI_number: 16128663 # Func_class: L Replication, recombination and repair # Function: Negative regulator of replication initiationR # Organism: Escherichia coli K12 # 1 181 1 181 181 343 99.0 1e-94 MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFTAASQPAAPVTKEVRVASPAIVEAK PVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLDAQAFAEATESLHGRTRVY FAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCGT I >gi|296918679|gb|GG773021.1| GENE 356 353357 - 354121 726 254 aa, chain + ## HITS:1 COG:ybfF KEGG:ns NR:ns ## COG: ybfF COG0596 # Protein_GI_number: 16128662 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 254 1 254 254 493 98.0 1e-139 MKLNIRAQTAQNQHNNSPIILVHGLFGSLDNLGVLARDLVNDHNIIQVDMRNHGLSPRDP VMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH VRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWCFNVPVLWD QYPHIVGWEKIPAWDHPTLFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEK PDAVLRAIRRYLND >gi|296918679|gb|GG773021.1| GENE 357 354192 - 354554 418 120 aa, chain + ## HITS:1 COG:no KEGG:ECP_0706 NR:ns ## KEGG: ECP_0706 # Name: not_defined # Def: LexA regulated protein; Provisional; region: PRK11675 # Organism: E.coli_536 # Pathway: not_defined # 1 120 1 120 120 190 99.0 1e-47 MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRIN KRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV >gi|296918679|gb|GG773021.1| GENE 358 354694 - 355224 782 176 aa, chain + ## HITS:1 COG:ECs0715 KEGG:ns NR:ns ## COG: ECs0715 COG0716 # Protein_GI_number: 15829969 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 348 100.0 3e-96 MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPTWYYG EAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHW PTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHLDEILNA >gi|296918679|gb|GG773021.1| GENE 359 355513 - 355959 429 148 aa, chain + ## HITS:1 COG:ECs0714 KEGG:ns NR:ns ## COG: ECs0714 COG0735 # Protein_GI_number: 15829968 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Escherichia coli O157:H7 # 1 148 1 148 148 279 100.0 1e-75 MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLN QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGI RLTNHSLYLYGHCAEGDCREDEHAHEGK >gi|296918679|gb|GG773021.1| GENE 360 356065 - 356391 429 108 aa, chain - ## HITS:1 COG:no KEGG:ECP_0702 NR:ns ## KEGG: ECP_0702 # Name: not_defined # Def: lipoprotein YbfN precursor # Organism: E.coli_536 # Pathway: not_defined # 1 108 1 108 108 166 98.0 4e-40 MKKLILIAMMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKE KQHQQFAEQESVRVLDYQQCIQATQTGNDQAVKADCDKVWQEIRSNNK >gi|296918679|gb|GG773021.1| GENE 361 356441 - 357847 1625 468 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0717 NR:ns ## KEGG: ECS88_0717 # Name: ybfM # Def: outer membrane porin # Organism: E.coli_S88 # Pathway: not_defined # 1 468 1 468 468 880 100.0 0 MRTFSGKRSTLALAIAGVTAMSGFMAIPEARAEGFIDDSTLTGGIYYWQRERDRKDVTDG DKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSSHPNEIAFSKSNKAY DEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANF DYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKVDYLHSLGAKYDFKNNFVLEAAF GQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRDKVDDRSVNDLYDGTAWLQALTFGY RAADVVDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFG AMYDLKNWNLPGFAIGASYVYAWDAKPATWQSNPDAYYDKNRTIEESAYSLDAVYTIQDG RAKGTMFKLHFTEYDNHSDIPSWGGGYGNIFQDERDVKFMVIAPFTIF >gi|296918679|gb|GG773021.1| GENE 362 358296 - 359960 2038 554 aa, chain - ## HITS:1 COG:ECs0710 KEGG:ns NR:ns ## COG: ECs0710 COG0008 # Protein_GI_number: 15829964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli O157:H7 # 1 554 1 554 554 1169 99.0 0 MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKG QCNLRFDDTNPVKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLA YVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMA SPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRL YDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRR GYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGE GEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA ERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVP NPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN RTVGLRDTWAKVGE >gi|296918679|gb|GG773021.1| GENE 363 360180 - 360911 551 243 aa, chain - ## HITS:1 COG:STM0164 KEGG:ns NR:ns ## COG: STM0164 COG1349 # Protein_GI_number: 16763554 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 3 224 13 234 255 319 71.0 3e-87 MDYLKSHNLVTVDELVAVTNASPATIRRDLIKLDEQGVISRTHGGVTLNRFIPTQPTTHE KMQRSLAEKHAIASAAASMVKAGDSVVLDAGTTMIELARQITHLPLRVITSDLHIALFLA EFKQIEVTIIGGRIDDSSQSCIGEHGRKLLQNTWPDVAFLSCNSWDLEKGITAPTEEKAA LKRDLIAHASRKILLADSSKYGSWSLFNIAHLNELTEIITDSQLDGQTRRTLASLSTRLI IAD >gi|296918679|gb|GG773021.1| GENE 364 360943 - 361353 294 136 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 1 133 194 326 346 117 45 2e-39 LPETCGIERPRIAVAGVNPHAGEHGLFGTEEIEIIAPAIEAMQAEDIDVTGPCPPDTVFM QCHEGLFDMVVAMYHDQGHIPLKLLGFYDGVNITAGLPFIRTSADHGTAFDIAWTGKAKS ESMAVSIQLAMQISRE >gi|296918679|gb|GG773021.1| GENE 365 361302 - 361928 169 208 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 2 188 6 192 346 69 29 2e-39 MNNIIAVTMGDPAGIGPEIIIKSLSEAGLAGAPVVVVGCVRTLRRIMAMNITPQAELRVI QKVCDAHFAPGVINVMDEPLANPDALTPGVVQAAAGDLAYRCIKRATALALSGEVKAIAT APLNKEALHLGGHNYPGHTELLAHLTGSKEYAMVLYTDKLKVIHISTHISLRKFLDTLNG ERVKTVIRVANHFLKRVVLSVRVLPWRV >gi|296918679|gb|GG773021.1| GENE 366 361921 - 363156 678 411 aa, chain - ## HITS:1 COG:STM0162 KEGG:ns NR:ns ## COG: STM0162 COG3395 # Protein_GI_number: 16763552 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 10 407 3 418 423 247 40.0 4e-65 MEKGITKPSILVVADDFTGANDAGVSLAQVGHTVDVAFEMHYRGDASVWVINSDSRAMDP KLAAMKITSLMSHLPLANNPPLVIKKIDSTLRGNIGAEIEALMKACGITGAVVAPAFPQA GRTTVAGECWVNGVRITETEFASDPKTPVLSARIADIIRLQTAIPCQPVTVSQLSHLSYE QPWIGVIDAQTDSDLDRIAAAVMQAKQPLLLVGSAGICDAVARRSAIMSPPTVLAIIGSM SEIAQRQIATLHSHPRITQIYVDVEHILAGNASDYDARIVQALQKGDHCIVHTCNDSVAR HQIDTLCQRWQMSRAALGEKICRFLGELTRQVLLRTMPDALYLSGGDVAMATASALGATG FRITGKVAQCVPYGHFLGGVWSRSVMTKAGGFGDETTLHQVLNFIEEKCSE >gi|296918679|gb|GG773021.1| GENE 367 363326 - 364483 759 385 aa, chain + ## HITS:1 COG:AGpA199 KEGG:ns NR:ns ## COG: AGpA199 COG1454 # Protein_GI_number: 16119364 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 26 378 48 399 399 189 34.0 6e-48 MVIINSTILSGAGAIPSLTSLLPDIRKMLLVTDRNIAQLDGVQQIRALLEKHCPQVNVID NVPAEPTHHDVRQLMDALGDASFDVVVGIGGGSVLDVAKLLSVLCHPQSPGLDALLAGEK PTQRVQSWLIPTTAGTGSEATPNAILAIPEQSTKVGIISQVLLPDYVALFPELTTSMPAH IAASTGIDALCHLLECFTATVANPVSDNAALTGLSKLFRHIQPAVNDPQDLRAKLEMLWA SYYGGVAITHAGTHLVHALSYPLGGKYHLPHGVANAILLAPCMAFVRPWAVEKFARVWDC IPDAETALSAEEKSHALVTWLQALVNQLKLPNNLADLGVPPEDIASLSEAALNVKRLMNN VPCQLDLQDVQAIYQTLFPQHQFKE >gi|296918679|gb|GG773021.1| GENE 368 364487 - 365374 807 295 aa, chain + ## HITS:1 COG:AGpA90 KEGG:ns NR:ns ## COG: AGpA90 COG0329 # Protein_GI_number: 16119295 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 9 294 7 293 298 243 43.0 3e-64 MPKTIEGVLTAIVTPFTATGSLNIPALKVQVNRQLEAGNAIFCGGTNGEFFVLNEQEKLS VTQTCVDEVAGRAPVVAHIGEISTRETIRLGQQIEKLGVDAVSVIAPYFVPLKQEELIAH YSAIADALSIPMFLYNIPARTGNTIQPETARALASHPNIIGIKDSAGSDESLKGFLDAVR DIDGFNVLNGPDSLIHKGFVEGCSACISGLANIAPREINAIWSRFHAGDIEGSYEAQESV TGLRTDLYKVAFSPAAVKKALQLMGHDVGDSRYAVNFTPEQISEIQQIIRHYNIN >gi|296918679|gb|GG773021.1| GENE 369 365434 - 365727 298 97 aa, chain + ## HITS:1 COG:ECs3689 KEGG:ns NR:ns ## COG: ECs3689 COG0861 # Protein_GI_number: 15832943 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 87 2 88 237 95 60.0 3e-20 MFLWFMQPDIWLTLITLTFLEIILGVDNIIFLSLVVAKLPLSQQNMARKLGLSCAMIMRI LLLISIAWLSHITQPLFTVLTLEISFRTLILLGAGCS >gi|296918679|gb|GG773021.1| GENE 370 365835 - 366155 220 106 aa, chain + ## HITS:1 COG:Z4150 KEGG:ns NR:ns ## COG: Z4150 COG0861 # Protein_GI_number: 15803352 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 EDL933 # 1 102 133 234 237 123 66.0 9e-29 MLLDIVFSLDSVITAVGLSQHIFIMIAAVMIAVGVMMFAAKTIGDFVNATPSIKILALTF LLFVGVLLVADSLNIHIAKEYLYFAIFFSLSVETLNIIRERRKFRH >gi|296918679|gb|GG773021.1| GENE 371 366220 - 367389 863 389 aa, chain + ## HITS:1 COG:AGpA102 KEGG:ns NR:ns ## COG: AGpA102 COG4692 # Protein_GI_number: 16119301 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted neuraminidase (sialidase) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 386 7 393 397 333 46.0 4e-91 MSVALIRDGVIRPSENDSHVLTAMLPSSCPQNHAANILPLPDGALMCVWFAGTQEGIADI SVWGSRLPAGGMQWSDAVKLSHDDTRSEQNPVLFLAPDNVLWLLWTAQISGNQDTAIVRY RKSDDLGQTWGEIATLLDKPGTFIRQPITVLDNGNWLLPVFYCRTQPGEKWVGNDDISAV KISADGGHSWRDVEVPQSLGCVHMNITMLHDGTLVALFRSRWADNIYISHSVDNGESWSV PQATELPNNNSSIQVTTLASGELALVYNAMSAAGAVERRASLYDEIVDGDDSRKEPTAVG RSAFWGAPRAPMTVAISADGGKSWPWRRNLDEGDGYCMTNNSLEKLNREFSYPSIKQSPD GTLHIAYTWWRQAIKYVRISPEWVKGQAS >gi|296918679|gb|GG773021.1| GENE 372 367386 - 367856 187 156 aa, chain + ## HITS:1 COG:STM4468 KEGG:ns NR:ns ## COG: STM4468 COG2731 # Protein_GI_number: 16767713 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 149 1 147 150 90 35.0 1e-18 MIIGNLNHLSLAGLPAWVRNILLRPECSLSALSTREDGRWQPEGCRWFCTLGTSDTQPAE LRHTEYHHLWADIQVVITGCEGINAGTRPIARENDEERKPDLFIAPSPENSVAITLHAGD FAVFMPEEPHQALCAIGTATSIRKAVFKVPRDMLEA >gi|296918679|gb|GG773021.1| GENE 373 367870 - 369150 1142 426 aa, chain + ## HITS:1 COG:STM3356 KEGG:ns NR:ns ## COG: STM3356 COG0471 # Protein_GI_number: 16766651 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Salmonella typhimurium LT2 # 5 425 4 419 422 124 25.0 4e-28 MTMEMILALGILVLMIVLIMSDKMPFGAPPLLACLLLVVSGLSTVQQAFAGFVNPSVVMI AGFMVVMAALQKTRLISNVKSAMISLVNKGSYRSYGLLLVIVMLGASLAGTGATGYYVLI LSLVSTIPYSKKLPTSKLMMPLGFATNHPLLPINLALLFGVTATVLETAGFHQEISMGRF ALVNLIMSAAFLAWSLIAYRFLPDHPIADASEDALAAREETFNALPAWKEYCTIAAFAVS VIGMMLMNILGNIAFVIPGLAGAFVLMIDVLDFKEVRDHMGAPVILMMAGVIGIADALAG TGFTAMVGDAVAGVLGSGVSPFVFIVAFALLTSTCATFTGSNMGSVYIFAPIAIAACTSL GLNPTAAAIAVVISGWNGGYMPIDGMPAMILGMGKYKLPEFWVFSVPMYLIRILALCAGA VFIFPM >gi|296918679|gb|GG773021.1| GENE 374 369273 - 371219 2079 648 aa, chain - ## HITS:1 COG:ECs0709_1 KEGG:ns NR:ns ## COG: ECs0709_1 COG1263 # Protein_GI_number: 15829963 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 1 390 1 390 390 690 100.0 0 MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQAGGAIFDNLALIFAIGV ASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGIITGLVGGAAYNRWSDIKL PDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFI NRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYAGDGTAGMFMSGFFPIMMFG LPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTG ISLFVATLLGIHAGFSFSAGAIDYALMYNLPAASQNVWMLLVMGVVFFAIYFVVFSLVIR MFNLKTPGREDKEDEIVTEEANSNTEEGLNQLATNYIAAVGGTDNLKAIDACITRLRLTV VDSARVNDAMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAMKKVVARGPVAAASAEATP ATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVS PAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILE MDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHVVAGQTPLYEIKK >gi|296918679|gb|GG773021.1| GENE 375 371552 - 372352 985 266 aa, chain + ## HITS:1 COG:ECs0708 KEGG:ns NR:ns ## COG: ECs0708 COG0363 # Protein_GI_number: 15829962 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 560 100.0 1e-159 MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQ VSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQ YEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQ VPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCD EPSTMELKVKTLRYFNELEAENIKGL >gi|296918679|gb|GG773021.1| GENE 376 372412 - 373560 1298 382 aa, chain + ## HITS:1 COG:ECs0707 KEGG:ns NR:ns ## COG: ECs0707 COG1820 # Protein_GI_number: 15829961 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 768 99.0 0 MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQL NGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAK HPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEV ISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEAD IYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCV DENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANL TAFTPDFKITRTIVNGNEVVTQ >gi|296918679|gb|GG773021.1| GENE 377 373569 - 374789 261 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 129 390 47 317 319 105 27 4e-21 MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQLAPASVTKITRQLIERG LIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITLFDLSSKVLAEEHYPLPER TQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVE ALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNG NVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDCTIKTI CKAANKGDSLASEVIEYVGRHLGKTIAIAINLFNPQKIVIAGEITEADKVLLPAIESCIN TQALKAFRTNLPVVRSELDHRSAIGAFALVKRAMLNGILLQHLLEN >gi|296918679|gb|GG773021.1| GENE 378 374837 - 375589 831 250 aa, chain + ## HITS:1 COG:ECs0705 KEGG:ns NR:ns ## COG: ECs0705 COG0647 # Protein_GI_number: 15829959 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 517 100.0 1e-147 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAG VDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETR SYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPW IIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWI YPSVAEIDVI >gi|296918679|gb|GG773021.1| GENE 379 375845 - 377509 1841 554 aa, chain + ## HITS:1 COG:asnB KEGG:ns NR:ns ## COG: asnB COG0367 # Protein_GI_number: 16128650 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Escherichia coli K12 # 1 554 1 554 554 1145 100.0 0 MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGA QPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQG MFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSY LWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDS SIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHF TVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLY FHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQD KMCGNGKMEKHILRECFEAYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLET ARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWDEAFKKMDD PSGRAVGVHQSAYK >gi|296918679|gb|GG773021.1| GENE 380 378780 - 379955 1085 391 aa, chain - ## HITS:1 COG:ubiF KEGG:ns NR:ns ## COG: ubiF COG0654 # Protein_GI_number: 16128645 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 391 1 391 391 768 98.0 0 MTNQPTEIAIVGGGMVGGALALGLAQHGFAVTVIEHAEPAPFVADSQPDVRISAISAASV SLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKLPLLGYMVENTVLQQALWQ ALEAHPKVTLRVPGSLIALHRHNDLQELELKGGETILAKLVIGADGANSQVRQMAGIGVH AWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPLFDNWASLVWYDSPARIRQLQNM NMAQLQAEIAKHFPSRLGYVTPLAAGAFPLIRRHALQYVQPGLALVGDAAHTIHPLAGQG VNLGYRDVDALIDVLVNARSYGEAWASYPVLKRYQMRRMADNFMMQSGMDLFYAGFSNNL PPLRFVRNLGLMAAERAGVLKRKALKYALGL >gi|296918679|gb|GG773021.1| GENE 381 380101 - 381525 435 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase [Veillonella parvula DSM 2008] # 1 390 1 389 449 172 28 2e-41 MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVF HQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRG DRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDD ILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSH PIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDI QISSDFIVGFPGETTDDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQ RLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIG KFVDVEITDVYPNSLRGKVVRTEDEMGLRVAETPESVIARTRKENDLGVGYYQP >gi|296918679|gb|GG773021.1| GENE 382 381678 - 382718 1345 346 aa, chain + ## HITS:1 COG:ECs0698 KEGG:ns NR:ns ## COG: ECs0698 COG1702 # Protein_GI_number: 15829952 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Escherichia coli O157:H7 # 1 346 14 359 359 644 99.0 0 MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAA DILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESVPEYGKAVNIKTKRGVIKP RTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK LGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFN FFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK >gi|296918679|gb|GG773021.1| GENE 383 382715 - 383182 705 155 aa, chain + ## HITS:1 COG:ybeY KEGG:ns NR:ns ## COG: ybeY COG0319 # Protein_GI_number: 16128642 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 155 1 155 155 271 100.0 2e-73 MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIRVVDTAESHSLNLTYRG KDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLL GYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE >gi|296918679|gb|GG773021.1| GENE 384 383272 - 384150 1043 292 aa, chain + ## HITS:1 COG:ECs0696 KEGG:ns NR:ns ## COG: ECs0696 COG4535 # Protein_GI_number: 15829950 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 508 100.0 1e-144 MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDSGQNDLIDEDTRDMLEG VMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAK DLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVT IEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIG GLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVKIPDDSPQPKLDE >gi|296918679|gb|GG773021.1| GENE 385 384175 - 385716 1882 513 aa, chain + ## HITS:1 COG:lnt KEGG:ns NR:ns ## COG: lnt COG0815 # Protein_GI_number: 16128640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Escherichia coli K12 # 1 512 1 512 512 990 99.0 0 MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGLQALTFNRRPLQSAAIG FCWGFGLFGSGINWVYVSIATFGGMPGPVNVFLVVLLAAYLSLYTGLFAGVLSRLWSKTT WLRVAIAAPALWQMTEFLRGWVLTGFPWLQFGYSQIDGPLKGLAPIMGVEAINFLLMMVS GLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQPEKTIQVSMVQGDIPQSLKWDEG QLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLKALDGELRDKGSSLVTGIV DARLNKQNRYDTYNTIITLGKGAPYSYESADRYNKNHLVPFGEFVPLESILRPLAPFFDL PMSSFSRGPYIQPPLSVNGIELTAAICYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSI GPWQHFQMARMRALELARPLLRSTNNGITAVIGPQGEIQAMIPQFTREVLTTNVTPTTGL TPYARTGNWPLWVLTALFGFAAVLMSLRQRRKR >gi|296918679|gb|GG773021.1| GENE 386 385843 - 387720 907 625 aa, chain - ## HITS:1 COG:RSp1525 KEGG:ns NR:ns ## COG: RSp1525 COG0705 # Protein_GI_number: 17549744 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Ralstonia solanacearum # 45 204 237 394 569 96 37.0 1e-19 MSASSVKPLNVQLPAITLILFALCVGIFCYLAQWMSYEEVDQSALIHLGANVASLTLSDE SWRLLSSVFLHSSFSHLLMNMFALLVVGTVAERILGKWRLLIIWLFSGIFGGLISACYTL RESEQIVISIGASGAIMGIAGAAIATQLASGAGTHHKNQRRVFPLLGMVALTLLYGTRQT GIDNACHIGGLIAGGALGWLSARLVGQNRLVTEGGIIVAVTLLLTGTIWFVQQQIDESVL QVGQSLREAFYPQEIEQERRQKKQQLVEERNALRETLSAPVSREQASGDLLAEIADIHDM AISRDGNTLYAAIENTNSIVVFDLGQKKILHTFTAPIAKEKSVKHCGGCKDQGVRSLALS LDEKLIYATSFEANALSVINVATGEIIQSITTGAHPDSFILSRDGTKAWVMNRTSNSVSA IDLVAYQHVADIPLEKYDGTGMSGKPGAWVMALSPDEKTLLVPGAGRGNIVRINTITHQK EDFPAGNARGVVSAMGFRPKNGEIIFADSQGISRIRAEDQQASIMTQWCSRSVYSVEGIS PDGQYLALVSYGLQGYVILLNINAGQIIGVYPASYVNHLRFSADDRKIFVMAKNRLIQMD RTRSLDPQAIIRHPQYGDVACIPEP >gi|296918679|gb|GG773021.1| GENE 387 388174 - 389082 1187 302 aa, chain + ## HITS:1 COG:STM0665 KEGG:ns NR:ns ## COG: STM0665 COG0834 # Protein_GI_number: 16764042 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 302 7 308 308 551 94.0 1e-157 MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQ KVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNAER QKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMR IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRK DDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDEMKALFKEPNDKA LN >gi|296918679|gb|GG773021.1| GENE 388 389313 - 390053 816 246 aa, chain + ## HITS:1 COG:gltJ KEGG:ns NR:ns ## COG: gltJ COG0765 # Protein_GI_number: 16128637 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 246 1 246 246 465 100.0 1e-131 MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRF LSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGL FTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLV KNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRLP GNMGGK >gi|296918679|gb|GG773021.1| GENE 389 390053 - 390727 702 224 aa, chain + ## HITS:1 COG:ECs0692 KEGG:ns NR:ns ## COG: ECs0692 COG0765 # Protein_GI_number: 15829946 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 224 1 224 224 370 100.0 1e-102 MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYV NVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGI QSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADF FRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA >gi|296918679|gb|GG773021.1| GENE 390 390727 - 391452 553 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 217 45 5e-55 MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITV DGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKRNKAPAREKALKL LERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMV ELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKIL H >gi|296918679|gb|GG773021.1| GENE 391 391570 - 392505 1035 311 aa, chain + ## HITS:1 COG:ECs0690 KEGG:ns NR:ns ## COG: ECs0690 COG1957 # Protein_GI_number: 15829944 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 619 99.0 1e-177 MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTD IPVASGAVKPLMRNLIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESEEPVT IVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQS GIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLH DPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGFV DLLADRLKFYA >gi|296918679|gb|GG773021.1| GENE 392 392550 - 393032 448 160 aa, chain - ## HITS:1 COG:no KEGG:ECSP_0696 NR:ns ## KEGG: ECSP_0696 # Name: ybeL # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 160 1 160 160 305 100.0 3e-82 MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLE EFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVV GLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP >gi|296918679|gb|GG773021.1| GENE 393 393126 - 395849 3004 907 aa, chain + ## HITS:1 COG:ECs0680 KEGG:ns NR:ns ## COG: ECs0680 COG0495 # Protein_GI_number: 15829934 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 48 907 1 860 860 1785 99.0 0 MNNPGIISTSSARKAVLTRAFGLCYADLKNHINATFVAVLKTGPLAAMQEQYRPEEIESK VQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNV LQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYY RWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFI KITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNVKDYDNTLTVYTTRPDTF MGCTYLAVAAGHPLAQKAAENNPELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPL TGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQ ALTEKGVLFNSGEFNGLDHEAAFNAIADKLTEMGVGERKVNYRLRDWGVSRQRYWGAPIP MVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTF MESSWYYARYTCPEYKEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGM VNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELV YTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRV WKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELM NKLAKAPTDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEK AMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGK LLNLVVG >gi|296918679|gb|GG773021.1| GENE 394 395960 - 396445 557 161 aa, chain + ## HITS:1 COG:rlpB KEGG:ns NR:ns ## COG: rlpB COG2980 # Protein_GI_number: 16128624 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rare lipoprotein B # Organism: Escherichia coli K12 # 1 161 33 193 193 273 100.0 8e-74 MKVMILDSGDPNGPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRN GQTAEYQMIMTVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAA EQLIRKLPSIRAADIRSDEEQTSTTTDTPATPARVSTTLGN >gi|296918679|gb|GG773021.1| GENE 395 396564 - 397505 733 313 aa, chain + ## HITS:1 COG:holA KEGG:ns NR:ns ## COG: holA COG1466 # Protein_GI_number: 16128623 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Escherichia coli K12 # 2 313 32 343 343 567 99.0 1e-161 MQESQDAVRQVAAAQGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPN AAINEQLLTLTGLLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRW VAARAKQLNLELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAGNDAA HFTPFHWVDALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLR ALFDKHRVWQNRRGMMSEALNRLSQSQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLL LCHKPLADVFIDG >gi|296918679|gb|GG773021.1| GENE 396 397507 - 398148 534 213 aa, chain + ## HITS:1 COG:nadD KEGG:ns NR:ns ## COG: nadD COG1057 # Protein_GI_number: 16128622 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Escherichia coli K12 # 1 213 1 213 213 414 99.0 1e-116 MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPEANSMQRKHML ELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEY ETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPEDLHLQPAGKIYLAETPWFNIS ATIIRERLQNGESCEDLLPEPVLTYINQQGLYR >gi|296918679|gb|GG773021.1| GENE 397 398172 - 398783 397 203 aa, chain + ## HITS:1 COG:ECs0676 KEGG:ns NR:ns ## COG: ECs0676 COG0406 # Protein_GI_number: 15829930 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Escherichia coli O157:H7 # 1 203 1 203 203 402 98.0 1e-112 MRLWLIRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLHDVSFDLVLCSELERAQH TARLVLSDRQHPVHIIPELNEMFFGDWEMRHHRDLMQEDAENYSAWCNDWQHAIPTNGEG FQAFSQRVERFIARLSEYQHYQNILVVSHQGVLSLLIARLIGMPAESMWHFRVDQGCWSA IDINQKFATLRVLNSRAIGVENA >gi|296918679|gb|GG773021.1| GENE 398 399043 - 399360 345 105 aa, chain + ## HITS:1 COG:STM0642 KEGG:ns NR:ns ## COG: STM0642 COG0799 # Protein_GI_number: 16764019 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Salmonella typhimurium LT2 # 1 105 1 105 105 187 97.0 3e-48 MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESR AAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS >gi|296918679|gb|GG773021.1| GENE 399 399364 - 399831 539 155 aa, chain + ## HITS:1 COG:ECs0674 KEGG:ns NR:ns ## COG: ECs0674 COG1576 # Protein_GI_number: 15829928 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 304 100.0 4e-83 MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQM LAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSW SLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE >gi|296918679|gb|GG773021.1| GENE 400 399862 - 401763 2042 633 aa, chain + ## HITS:1 COG:ECs0673 KEGG:ns NR:ns ## COG: ECs0673 COG0768 # Protein_GI_number: 15829927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Escherichia coli O157:H7 # 1 633 1 633 633 1295 100.0 0 MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIK LVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTLDALRSVVDLTDDDIAAFR KERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVS KINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLK EVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDG ISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTTLFDPGWWQL PGSEKRYRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYTGID LAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVKV PHLLMSTAEDGKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPNGTAHKYFASAPYK IAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAV GTLMRQILDHIMLGDNNTDLPAENPAVAAAEDH >gi|296918679|gb|GG773021.1| GENE 401 401766 - 402878 1108 370 aa, chain + ## HITS:1 COG:ECs0672 KEGG:ns NR:ns ## COG: ECs0672 COG0772 # Protein_GI_number: 15829926 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Escherichia coli O157:H7 # 1 370 1 370 370 616 99.0 1e-176 MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIGMMERKIGQIAMGLVIM VVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRWLDLGIVRFQPSEIAKIAV PLMVARFINRDVCPPSLKNTAIALVLIFMPTLLVAAQPDLGTSILVALSGLFVLFLSGLS WRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPESDPLGAGYHIIQSKIAIGSGGL RGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVGILILLALYILLIMRGLWIAARAQT TFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIH THRKMLSKSV >gi|296918679|gb|GG773021.1| GENE 402 402889 - 403977 827 362 aa, chain + ## HITS:1 COG:rlpA KEGG:ns NR:ns ## COG: rlpA COG0797 # Protein_GI_number: 16128616 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Escherichia coli K12 # 1 362 1 362 362 563 98.0 1e-160 MRKQWLGICIAAGMLAACTSDDSQQQTVSVPQPAVCNGPIVEISGADPRFEPLNATANQD YQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFDPTQLTAAHPTLPIPSYAR ITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSNNTKVRIDPIIVAQDGSLSGP GMACTTVAKQTYALPAPPDLSGGAGTSSVPVPQGDILPVSNSTLKSEDPTGAPVTSSGFL GAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPAMVTPQAASQSASGNFMVQVGAVSD QARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGPFASKAEASTLQQRLQTEAQLQSFITT AQ >gi|296918679|gb|GG773021.1| GENE 403 404117 - 405328 1313 403 aa, chain + ## HITS:1 COG:ZdacA KEGG:ns NR:ns ## COG: ZdacA COG1686 # Protein_GI_number: 15800346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 EDL933 # 1 403 1 403 403 825 100.0 0 MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVL AEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFL KPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVH GLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDG IKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKV GKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGT INFQLDGKTIEQRPLVVLQEIPEGNFFGKIIDYIKLMFHHWFG >gi|296918679|gb|GG773021.1| GENE 404 405438 - 405701 335 87 aa, chain + ## HITS:1 COG:ECs0669 KEGG:ns NR:ns ## COG: ECs0669 COG2921 # Protein_GI_number: 15829923 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 157 100.0 5e-39 MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTPTVKPSSKGNYHSVSI TINATHIEQVETLYEELGKIDIVRMVL >gi|296918679|gb|GG773021.1| GENE 405 405802 - 406443 542 213 aa, chain + ## HITS:1 COG:ECs0668 KEGG:ns NR:ns ## COG: ECs0668 COG0321 # Protein_GI_number: 15829922 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Escherichia coli O157:H7 # 23 213 1 191 191 401 100.0 1e-112 MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHYPVFTQGQAGKAEHILM PGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAELGIEA HPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDLSPFLRINPCGYAGMEMAKIS QWKPEATTNNIAPRLLENILALLNNPDFEYITA >gi|296918679|gb|GG773021.1| GENE 406 407263 - 408228 991 321 aa, chain + ## HITS:1 COG:ECs0666 KEGG:ns NR:ns ## COG: ECs0666 COG0320 # Protein_GI_number: 15829920 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 657 100.0 0 MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIKLPADSTRIQGIKAAMR KNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVAHGRPVAPDANEPVKLA QTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKSPQIKIETLVPDFRGRMDRAL DILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLLERFKEAHPEIPTKSGLMVGLGE TNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQRYVSPDEFDEMKAEALAMGFTHAA CGPFVRSSYHADLQAKGMEVK >gi|296918679|gb|GG773021.1| GENE 407 408390 - 408599 178 69 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 59 1 59 83 73 57 2e-11 VSMGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDAAAKKGADVDL QAEKLSHKE >gi|296918679|gb|GG773021.1| GENE 408 408722 - 409510 880 262 aa, chain - ## HITS:1 COG:ECs0664 KEGG:ns NR:ns ## COG: ECs0664 COG0388 # Protein_GI_number: 15829918 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 499 99.0 1e-141 MLVAAGQFAVTSVWEKNAEICGSLMAQAAENDVSLFVLPEALLARDDHDADLSVKSAQLL EGEFLGRLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAGNIVARYAKLHLYDAFAIQ ESRHVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQALQGAEILVLPAAWVRGPLKE HHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPFGVTIAAASEMPALIMAEVTPER VRQVRAQLPVLNNRRFAPPQLL >gi|296918679|gb|GG773021.1| GENE 409 409606 - 409989 222 127 aa, chain + ## HITS:1 COG:ECs0663 KEGG:ns NR:ns ## COG: ECs0663 COG0239 # Protein_GI_number: 15829917 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Escherichia coli O157:H7 # 1 127 1 127 127 202 100.0 1e-52 MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTN IDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWL FSASTAH >gi|296918679|gb|GG773021.1| GENE 410 410060 - 410269 317 69 aa, chain - ## HITS:1 COG:ECs0662 KEGG:ns NR:ns ## COG: ECs0662 COG1278 # Protein_GI_number: 15829916 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 124 100.0 4e-29 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG PSAANVIAL >gi|296918679|gb|GG773021.1| GENE 411 410444 - 411004 453 186 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0664 NR:ns ## KEGG: ECS88_0664 # Name: pagP # Def: palmitoyl transferase # Organism: E.coli_S88 # Pathway: not_defined # 1 186 1 186 186 355 100.0 5e-97 MNVSKYVAIFFFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHAR FAYDKEKTDRYNERPWGGGFGQSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTRRP LADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPATFQMTYIPGTYNNGNVYFA WMRFQF >gi|296918679|gb|GG773021.1| GENE 412 411591 - 412976 1386 461 aa, chain + ## HITS:1 COG:ECs0660 KEGG:ns NR:ns ## COG: ECs0660 COG3069 # Protein_GI_number: 15829914 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 461 1 461 461 632 99.0 0 MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAIMGHKVLPSSQASTGYS ATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLM IAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGD VVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKEHISHEMLDVSEITT TAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVICMLIASILEFIRSFNTQKVFSGLE VAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQSLISIATSFGSASIILMLVLVILTML AAVTTGSGNAPFYAFVEMIPKLAHSSGINPAYLTIPMLQASNLGRTLSPVSGVVVAVAGM AKISPFEVVKRTSVPVLVGLVIVIVATELMVPGTAAAVTGK >gi|296918679|gb|GG773021.1| GENE 413 413017 - 413697 263 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 5 223 1 221 226 105 28 2e-21 MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYL PDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTR FRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGIDPLTLNAVRKLFKEPGVQHTA ETVAQALTISRTTARRYLEYCASRHLIIAEIVHGKVGRPQRIYHSG >gi|296918679|gb|GG773021.1| GENE 414 413666 - 415324 1505 552 aa, chain - ## HITS:1 COG:citA KEGG:ns NR:ns ## COG: citA COG3290 # Protein_GI_number: 16128602 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Escherichia coli K12 # 1 552 1 552 552 1098 98.0 0 MLQLKENKQFAFFQRLAFPLRIFLLILVFSIFVIAALAQYFTASFEDYLTLHVRDMAMNQ AKIIASNDSIISAVKTRDYKRLATIADKLQRDTDFDYVVIGDRHSIRLYHPNPEKIGYPM QFTKPGALEKGESYFITGKGSIGMAMRAKTPIFDDDGKVIGVVSIGYLVSKIDSWRAEFL LPMAGVFVVLLGILMLLSWFLAAHIRRQMMGMEPKQIARVVRQQEALFSSVYEGLIAVDP HGYITAINRNARKMLGLSSPGRQWLGKPIAEVVRPADFFTEQIDEKRQDVVANFNGLSVI ANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQIKQYVESLRTLRHEHLNWMSTLNGLL QMKEYDRVLAMVQGESQAQQQLIDSLREAFADRQVAGLLFGKVQRARELGLKMVIVPGSQ LSQLPPGLDRTEFAAIVGNLLDNAFEASLRSDEGNKIVELFLSDEGDDVVIEVADQGCGV PESLRDKIFEQGVSTRADEPGEHGIGLYLIASYVTRCGGVITLEDNDPCGTLFSIYIPKV KPNDSSINPIDR >gi|296918679|gb|GG773021.1| GENE 415 415703 - 416761 877 352 aa, chain + ## HITS:1 COG:citC KEGG:ns NR:ns ## COG: citC COG3053 # Protein_GI_number: 16128601 # Func_class: C Energy production and conversion # Function: Citrate lyase synthetase # Organism: Escherichia coli K12 # 1 352 30 381 381 724 100.0 0 MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIK CVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVM VLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLV KEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEID LKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQ EMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA >gi|296918679|gb|GG773021.1| GENE 416 416776 - 417072 306 98 aa, chain + ## HITS:1 COG:ECs0656 KEGG:ns NR:ns ## COG: ECs0656 COG3052 # Protein_GI_number: 15829910 # Func_class: C Energy production and conversion # Function: Citrate lyase, gamma subunit # Organism: Escherichia coli O157:H7 # 1 98 1 98 98 182 100.0 1e-46 MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDAIRTTILDVLARYNVRG VQLNVDDKGALDCILRARLEALLARASGIPALPWEDCQ >gi|296918679|gb|GG773021.1| GENE 417 417069 - 417977 1162 302 aa, chain + ## HITS:1 COG:citE KEGG:ns NR:ns ## COG: citE COG2301 # Protein_GI_number: 16128599 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Escherichia coli K12 # 1 302 6 307 307 542 100.0 1e-154 MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREKDTARRMVY HALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRLPKTDTAQDVLDIEKEILR IEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGIALGAEDYVRNLRTERSPEGT ELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEAAHIKQLGFDGKSLINPRQIDLL HNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNGKMVDGPVIDRARLVLSRAELSGIR EE >gi|296918679|gb|GG773021.1| GENE 418 417988 - 419520 1777 510 aa, chain + ## HITS:1 COG:citF KEGG:ns NR:ns ## COG: citF COG3051 # Protein_GI_number: 16128598 # Func_class: C Energy production and conversion # Function: Citrate lyase, alpha subunit # Organism: Escherichia coli K12 # 1 510 1 510 510 1006 99.0 0 MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDRKLCANLEEAIRRSGLQ DGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSDCHAPLVEHIRQGVVTRIY TSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNIDVAFLGVPSCDEFGNANGYS GKACCGSLGYAMVDADNAKQVVMLTEELLPYPHNPASIEQDQVDLIVKVDRVGDAAKIGA GATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQTGTGGASLAVTRFLEDKMRSRDIRA DFALGGITATMVDLHEKGLIRKLLDVQSFDSHAAQSLARNPNHIEISANQYANWGSKGAA VDRLDVVVLSALEIDTQFNVNVLTGSDGVLRGASGGHCDTAIASALSIIVAPLVRGRIPT LVDNVLTCITPGSSVDILVTDHGIAVNPARPELAERLQEAGIKVVSIEWLRERARLLTGE PQPIEFTDRVVAVVRYRDGSVIDVVHQVKE >gi|296918679|gb|GG773021.1| GENE 419 419524 - 420075 311 183 aa, chain + ## HITS:1 COG:ECs0653 KEGG:ns NR:ns ## COG: ECs0653 COG3697 # Protein_GI_number: 15829907 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 346 97.0 1e-95 MHLLPEFASHHAVSIPELLVSRDERQARQHAWLKRHPVPLVSFTVVAPGPIKDSEVTRRI FNHGVTALRALATKQGWQIQEQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRL WDIDVLTPEGDILSRRDYSLPPRRCLLCEQSAAVCARGKTHQLTDLLNRMEALLNDVDAC NVN >gi|296918679|gb|GG773021.1| GENE 420 420050 - 420928 574 292 aa, chain + ## HITS:1 COG:citG KEGG:ns NR:ns ## COG: citG COG1767 # Protein_GI_number: 16128596 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Escherichia coli K12 # 1 292 1 292 292 546 96.0 1e-155 MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHR SALAIQGWLPRFIEFGACSAEMAPEEVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLG LLCAAIGRLLQLNQSVTPITICATAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGAR GEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMATNGDTNVASRGGEGGLRWL QREAQTLLNNGGIRTPADLDYLRQFDRECIERNISPGGSADLLILTWFLAQI >gi|296918679|gb|GG773021.1| GENE 421 420979 - 422442 1714 487 aa, chain + ## HITS:1 COG:ECs0651 KEGG:ns NR:ns ## COG: ECs0651 COG0471 # Protein_GI_number: 15829905 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 487 1 487 487 866 99.0 0 MSLAKDNIWKLLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAMIVGMILEPIPATAISF IAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSSTTVWLVFGAFIFALGYEVS GLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKS FPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQWFLCF LPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDELKTMGALTRREWTLIGLVLLSLGL WVFGSEVINATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGF IDWFANTMSTHLEGFSPNATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVP MEQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVGW PILAMWN >gi|296918679|gb|GG773021.1| GENE 422 422551 - 423375 493 274 aa, chain + ## HITS:1 COG:ECs0650 KEGG:ns NR:ns ## COG: ECs0650 COG3719 # Protein_GI_number: 15829904 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease I # Organism: Escherichia coli O157:H7 # 7 274 1 268 268 546 98.0 1e-155 MSSTPIMKAFWRNAALLAVSLLPFSSANAVALQAKQYDDFDRYVLALSWQTGFCQSQYDR NRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPIPNLPEA RASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACFGFDPDAYFGTMVRL NQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKLTCQGNPAYLTEIQISI KADAINAPLSANSFLPQPHPGNCGKTFVIDKAGY >gi|296918679|gb|GG773021.1| GENE 423 423605 - 424015 421 136 aa, chain + ## HITS:1 COG:ECs0649 KEGG:ns NR:ns ## COG: ECs0649 COG0782 # Protein_GI_number: 15829903 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 259 100.0 7e-70 MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE VLELEYQPEAAGDYLL >gi|296918679|gb|GG773021.1| GENE 424 424371 - 424799 443 142 aa, chain + ## HITS:1 COG:ECs0646 KEGG:ns NR:ns ## COG: ECs0646 COG0589 # Protein_GI_number: 15829900 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 142 1 142 142 248 98.0 2e-66 MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEE HLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAKELDADVVVIGSRNPSIST HLLGSNASSVIRHANLPVLVVR >gi|296918679|gb|GG773021.1| GENE 425 424920 - 426485 411 521 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 213 515 2 303 306 162 31 1e-38 MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNSLPV RKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRHIDGDFE FETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQNEITDRNVMGVPAVFVNGKE FGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIVGSGPAGAAAAIYSARKGIRTGL MGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEG GLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAV IGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGD GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNV KGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTKTA >gi|296918679|gb|GG773021.1| GENE 426 426656 - 427219 607 187 aa, chain - ## HITS:1 COG:ECs0644 KEGG:ns NR:ns ## COG: ECs0644 COG0450 # Protein_GI_number: 15829898 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 381 100.0 1e-106 MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEE LQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADR ATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVASHPGEVCPAKWKEGEATLAPS LDLVGKI >gi|296918679|gb|GG773021.1| GENE 427 427591 - 428337 758 248 aa, chain + ## HITS:1 COG:dsbG KEGG:ns NR:ns ## COG: dsbG COG1651 # Protein_GI_number: 16128587 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Escherichia coli K12 # 12 248 32 268 268 472 99.0 1e-133 MLKKILLLALLPAIAFAEELPAPVKAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYL TPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYV FADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYE ASGGKLKLSVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKT LNIIMGNK >gi|296918679|gb|GG773021.1| GENE 428 428542 - 429444 448 300 aa, chain + ## HITS:1 COG:ybdO KEGG:ns NR:ns ## COG: ybdO COG0583 # Protein_GI_number: 16128586 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 300 1 300 300 511 88.0 1e-145 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCTNNNMLIRCL RQDTSIDIECHDILLSAENAEELLVQRKTDLAITLQPVISRSVICMPLHTIRNSLICSNK HPRITDTSNYEQIIAEEFTLLISKSAGIDEIQMDIDERFMNRKVSFRSSSLMTIINSISV TDLLGIVPTELYDLHRDFLKLKEIKLEQPLPAVKLYISYNKASLNNLVFSRFIDRLNDSF >gi|296918679|gb|GG773021.1| GENE 429 429591 - 430811 903 406 aa, chain + ## HITS:1 COG:ECs0641 KEGG:ns NR:ns ## COG: ECs0641 COG3969 # Protein_GI_number: 15829895 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 825 98.0 0 MSIYKIPLPLNILEAAKERITWTLNTLPRICVSFSGGKDSGLMLHLTAEIARQMGKKICV LFIDWEAQFSCTINYVQSLREFYADVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWV RQPPQDAITDPDFFSFYQPGMTFEQFVREFAEWFSQKRPAAMMIGIRADESYNRFVAIAS LNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQQLCNPLYNIMYQAGVPL RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKP EHLDWQEYALLLLNSMPEKTAEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRR ICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWGILCNND >gi|296918679|gb|GG773021.1| GENE 430 430796 - 431413 483 205 aa, chain + ## HITS:1 COG:ECs0640 KEGG:ns NR:ns ## COG: ECs0640 COG1475 # Protein_GI_number: 15829894 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 205 5 209 209 405 99.0 1e-113 MQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYN PNNVAPPEKKLLKKSIEIDGFTQPIVVTHTDKNALEIVDGFHRHEIGKGSSSLKLRLKGY LPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEV LRLKQINGLQELFADRQFSRAWTVK >gi|296918679|gb|GG773021.1| GENE 431 431414 - 432574 823 386 aa, chain - ## HITS:1 COG:ECs0639 KEGG:ns NR:ns ## COG: ECs0639 COG0436 # Protein_GI_number: 15829893 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli O157:H7 # 1 386 1 386 386 764 97.0 0 MTNNPLIPQSKLPQLGTTIFTRMSALAQQHQAINLSQGFPDFDGPRYLQERLAYHVAQGA NQYAPMTGVQALREAIAQKTERLYGYQPDVDSNITVTAGATEALYAAITALVRNGDEVIC FDPSYDSYAPAIALSGGIVKRIALQPPHFRVDWQKFAALLSERTRLVILNTPHNPSATVW QQTDFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHM TGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRD ILVNALNESRLEILPCEGTYFLLVDYSAVSTMDDVEFCQWLTREHGVAAIPLSVFCADPF PHKLIRLCFAKKESTLLAAAERLRQL >gi|296918679|gb|GG773021.1| GENE 432 432694 - 433782 1096 362 aa, chain + ## HITS:1 COG:ybdH KEGG:ns NR:ns ## COG: ybdH COG0371 # Protein_GI_number: 16128582 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 1 362 1 362 362 685 97.0 0 MPHNPIRVVVGPANYFSHPGSFNHLHDFFTDEQLSRAVWIYGERAIAAAQTKLPPAFELP GVKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTAKALARRLGLPFVAVPTIA ATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLLEPEIILNAPQEYLLAGIGDTLAKWYE AVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALADQQNQQLTQSFCDVVDAIIAGG GMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLTG AYQRFHLPTTLAELEVDINNQVEIDKMIAHTLRPVESIHYLPVTLTPDTLRAAFEKVESF KA >gi|296918679|gb|GG773021.1| GENE 433 433792 - 433989 277 65 aa, chain - ## HITS:1 COG:ybdD KEGG:ns NR:ns ## COG: ybdD COG2879 # Protein_GI_number: 16132239 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli K12 # 1 65 1 65 65 129 100.0 1e-30 MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKG GARCC >gi|296918679|gb|GG773021.1| GENE 434 434102 - 436207 2746 701 aa, chain - ## HITS:1 COG:cstA KEGG:ns NR:ns ## COG: cstA COG1966 # Protein_GI_number: 16128581 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Escherichia coli K12 # 1 701 1 701 701 1280 99.0 0 MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCIYLIAYRFYGLYIAKNV LAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWL LAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVIALVACFMIMVIILAVLAM IVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVA ESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILI MRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQA CFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVLAPAGTADVVASAAQVVSSWG FAITPDTLNQIASEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMDVAFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDP LGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQK AFSPDAKVGFLAIANKFQAMIDSGNIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLA LFSIKTALAALKEPKPTAKETPYEPMPENVEEIVAQAKGAH >gi|296918679|gb|GG773021.1| GENE 435 436388 - 436801 374 137 aa, chain - ## HITS:1 COG:ybdB KEGG:ns NR:ns ## COG: ybdB COG2050 # Protein_GI_number: 16128580 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 137 1 137 137 275 100.0 1e-74 MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAA LAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVCQPLHLGRQNQSWEIVVFD EQGRRCCTCRLGTAVLG >gi|296918679|gb|GG773021.1| GENE 436 436804 - 437550 878 248 aa, chain - ## HITS:1 COG:ECs0635 KEGG:ns NR:ns ## COG: ECs0635 COG1028 # Protein_GI_number: 15829889 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 452 99.0 1e-127 MDFSGKNVWITGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVA QVCQRLLAETERLDVLVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRR QRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTD MQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVV DGGSTLGA >gi|296918679|gb|GG773021.1| GENE 437 437550 - 438407 1191 285 aa, chain - ## HITS:1 COG:entB_1 KEGG:ns NR:ns ## COG: entB_1 COG1535 # Protein_GI_number: 16128578 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate hydrolase # Organism: Escherichia coli K12 # 1 215 1 215 215 437 100.0 1e-123 MAIPKLQAYALPESHDIPQNKVDWAFEPQRAALLIHDMQDYFVSFWGENCPMMEQVIANI AALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQKVVDRLTPDADDTV LVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALAD FSRDEHLMSLKYVAGRSGRVVMTEELLPAPIPASKAALREVILPLLDESDEPFDDDNLID YGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAWWKLLSREVK >gi|296918679|gb|GG773021.1| GENE 438 438421 - 440031 1503 536 aa, chain - ## HITS:1 COG:entE KEGG:ns NR:ns ## COG: entE COG1021 # Protein_GI_number: 16128577 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Peptide arylation enzymes # Organism: Escherichia coli K12 # 1 536 1 536 536 1085 99.0 0 MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVIDGERQLSYRELNQAADN LACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQRSELNAYASQIE PALLIADRQHALFSGDDFLNTFVAEHSSIRVVQLLNDSGEHNLQDAINHPAEDFTATPSP ADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSS PGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALAEGESRAQLA SLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMC PDDEVWVADAEGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISID PEGYITVQGREKDQINRGGEKIAAEEIENQLLRHPAVIYAALVSMEDELMGEKSCAYLVV KEPLRAVQVRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRTSA >gi|296918679|gb|GG773021.1| GENE 439 440041 - 441216 1130 391 aa, chain - ## HITS:1 COG:ECs0632 KEGG:ns NR:ns ## COG: ECs0632 COG1169 # Protein_GI_number: 15829886 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 756 99.0 0 MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAAL FADAKAQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEKQASARRFTRSQSLNVVER QAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDSGVLLERLIAQNPVSYN FHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRH EHELVTQAMKEVLRKRSSELHVPSSPQLITTPTLWHLATPFEGKANSQENALTLACLLHP TPALSGFPHQAATQVIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFA GAGIVPASSPLGEWRETGVKLSTMLNVFGLH >gi|296918679|gb|GG773021.1| GENE 440 441405 - 442361 1015 318 aa, chain + ## HITS:1 COG:ECs0631 KEGG:ns NR:ns ## COG: ECs0631 COG4592 # Protein_GI_number: 15829885 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe2+-enterobactin transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 572 98.0 1e-163 MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSL LAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLIL ISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLGEITGHEKQAAERIAQFDKQL AAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQG KRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETF RLDYYSAMQVLDRLKALF >gi|296918679|gb|GG773021.1| GENE 441 442365 - 443615 1193 416 aa, chain - ## HITS:1 COG:ECs0630 KEGG:ns NR:ns ## COG: ECs0630 COG0477 # Protein_GI_number: 15829884 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 415 1 415 416 570 99.0 1e-162 MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQIQMMTHSTWQVGLSVTL TGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLNALLPEPSLLAIYLLGLWD GFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLLATGGVAWNYG LAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFRFLLASPLVGGIALLGGLLTMAS AVRVLYPALADNWQMSAAQIGFLYAAIPLGAAIGALTSGKLAHSVRPGLLMLLSTLGAFL AISLFGLMPMWILGVVCLALFGWLSAVSSLLQYTMLQTQTPEAMLGRINGLWTAQNVTGD AIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLVELRRFRQTPPQVTASDS >gi|296918679|gb|GG773021.1| GENE 442 443714 - 444730 1206 338 aa, chain + ## HITS:1 COG:ECs0629 KEGG:ns NR:ns ## COG: ECs0629 COG0609 # Protein_GI_number: 15829883 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 5 338 1 334 334 448 99.0 1e-126 MEVRMSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEALSGTCQSADCTIV LDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSS AQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLTSGIALLNPDV YDQLRFWQAGSLDIRNLHTLKVVLIPVLTAGATALLLSRALNSLSLGSDTATALGSRVAR TQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFA DIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA >gi|296918679|gb|GG773021.1| GENE 443 444727 - 445719 986 330 aa, chain + ## HITS:1 COG:fepG KEGG:ns NR:ns ## COG: fepG COG4779 # Protein_GI_number: 16128572 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterobactin transport system, permease component # Organism: Escherichia coli K12 # 1 330 1 330 330 460 97.0 1e-129 MIYVSRRLIITCLLLLIACVMAGVWGLRSGAVTLETSQVFAALMGDTPRSMTMVVTEWRL PRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWSGVLVAMVLFGQDLTAIAL AAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVAFNTWLLLKASLETALTAGLW NAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLEMGDDTACALGVSVERSRLLMML VAVVLTAAATALAGPISFIALVAPHIARRISGTARWGLTQAALCGALLLLVADLCAQQLF MPYQLPVGVVTVSLGGIYLIVLLIQESRKK >gi|296918679|gb|GG773021.1| GENE 444 445716 - 446531 196 271 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 8 232 9 228 309 80 25 1e-13 MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED EDAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQI DLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERI YGLRCMIIDDPVAGTPLVVPLGRTAPSTAKI >gi|296918679|gb|GG773021.1| GENE 445 446528 - 447661 964 377 aa, chain - ## HITS:1 COG:fepE KEGG:ns NR:ns ## COG: fepE COG3765 # Protein_GI_number: 16128570 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli K12 # 1 377 1 377 377 685 93.0 0 MSSLNIKQGSEAHFPEYPLASPSNNEIDLLSLIEVLWRAKKTVMAVVFAFACAGLLISFI LPQKWTSSAVITPAEAIQWQDLEKTFTKLRVLDLDINIDRGGAFNLFIKRFQSVSLLEEY LRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNASKKKDEPSLYTSWTLSFTAPT SEEAQKVLAGYIDYISALVVKESIENVRNKLEIKTQFEKEKLAQDRIKTKNQLDANIQRL NYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGADGIERKLEIEKAVTDVAELNGELRN RQYLVEQLTKANINDVNFTPFKYQLRPSLPVKKDGPGKSIIVILSALIGGMVACGGVLLR HAMASRKQDAMMADHLV >gi|296918679|gb|GG773021.1| GENE 446 447877 - 451758 3520 1293 aa, chain - ## HITS:1 COG:ZentF_1 KEGG:ns NR:ns ## COG: ZentF_1 COG1020 # Protein_GI_number: 15800301 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Escherichia coli O157:H7 EDL933 # 1 1060 1 1060 1060 1973 97.0 0 MSQHLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELTGEVDAPLLARAVVAGLAQADTLRM RFTEDNGEVWQWVDDAQTFELPEIIDLRTNIDPHGTARALMQADLQQDLRVDSGKPLVFH QLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCALLRGEPTPASPFTPFADVVEE YQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGRSASADILRLKLEFTNGEFRQLA TQLSGVQRTDLALALAALWLGRLCNRMDYAAGFIFMRRLGSAALTATGPVLNVLPLGIHI AAQETLPQLATRLAAQLKKMRRHQRYDAEQIVRDSGRAAGEEPLFGPVLNIKVFDYQLDI PGVQAQTHTLATGPVNDLELALFPDEHGDLSIEILANKQRYDEPTLIQHAERLKMLIAQF AADPSLLCGDVDIMLPGEYAQLAQINATQVEIPETTLSALVAEQAAKTPDAPALADARYQ FSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYP DDRLKMMLEDARPSLLITTDDQLPRFSDIPNLTSLCYNAPLTPQGSAPLQLSQPHHTAYI IFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTGEDVVAQKTPCSFDVSVWEFFWPFIA GAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVF CSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAEVRGSSVPIGYPVW NTGLRILDAMMHPVPPGVVGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGD VARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGG DARQLVGYLVSQSGLPLDTSALQAQLRETLPPHMVPVVLLQLPQLPLSANGKLDRKALPL PELKAQAPGRAPKAGSETIIAAAFSSLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQF ARQVTPGQVMVASTVAKLATIIDGEEDSTQRMGFETILPLREGNGPTLFCFHPASGFAWQ FSVLSRYLDPQWSIIGIQSPRPHGPMQTSANLDEVCEAHLATLLEQQPHGPYYLLGYSLG GTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAA QQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMTPEQAWAPWIA GLDIYRQDCAHVDIISPVAFEKIGPIIRATLNK >gi|296918679|gb|GG773021.1| GENE 447 451755 - 451973 252 72 aa, chain - ## HITS:1 COG:Z0726 KEGG:ns NR:ns ## COG: Z0726 COG3251 # Protein_GI_number: 15800300 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 72 1 72 72 116 94.0 1e-26 MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCALPAGWDVVCQPQSQASCQQWLEAHWRTL TPANFTQLQEAQ >gi|296918679|gb|GG773021.1| GENE 448 451976 - 453178 719 400 aa, chain - ## HITS:1 COG:ECs0624 KEGG:ns NR:ns ## COG: ECs0624 COG2382 # Protein_GI_number: 15829878 # Func_class: P Inorganic ion transport and metabolism # Function: Enterochelin esterase and related enzymes # Organism: Escherichia coli O157:H7 # 27 400 1 374 374 702 95.0 0 MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHH QNSQPRSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIFSAPSPDRLELREGWRKLL PQAIADPLNPQSWKGGRGHAVSALEMPQASLQPGWDCPQAPETPAKEIIWKSERLKNSRR VWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPALTSLTHRRQLPPAVYVLIDAIDTTHR AHELPCNADFWLAVQQELLPQVKAIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGC VLSQSGSYWWPHRGGHQEGMLLEQLNTGEVSAEGLRIVLEAGVREPMIMQANQALYAQLH PLKESIFWRQVDGGHDALCWRGGLMQGLIDLWQPLFHDRS >gi|296918679|gb|GG773021.1| GENE 449 453421 - 455661 2693 746 aa, chain + ## HITS:1 COG:ECs0623 KEGG:ns NR:ns ## COG: ECs0623 COG4771 # Protein_GI_number: 15829877 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Escherichia coli O157:H7 # 1 746 1 746 746 1441 99.0 0 MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQNLQAPGVSTITADEIRK NPVARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNSVR QGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWD AYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLDKTQADAWDINQGHQSARAGTYA TTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNSDAYTRSKYG DETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHTRNSRIPEGLAGGTEGKFNEKAAQDFV DIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWNQQRMKDLSSNTQALTGTNTGGAIDGVSA TDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTL KMGIARAYKAPSLYQTNPNYILYSKGQGCYASAGGCYLQGNDDLKAETSINKEIGLEFKR DGWLAGVTWFRNDYRNKIEAGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETV MWTNNITYMLKSENKTTGDRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNY KGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGA NYIAGAGAYTYNEPGRTWYMSINTHF >gi|296918679|gb|GG773021.1| GENE 450 455827 - 456456 434 209 aa, chain + ## HITS:1 COG:entD KEGG:ns NR:ns ## COG: entD COG2977 # Protein_GI_number: 16128566 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phosphopantetheinyl transferase component of siderophore synthetase # Organism: Escherichia coli K12 # 1 209 1 209 209 395 92.0 1e-110 MVDMKTTHTSLPFAGHTLHFVEFDPASFREQDLLWLPHYAQLQHAGRKRKTEHLAGRIAA IYALREYGYKCVPAIGELRQPVWPAGVYGSISHCGTTALAVVSRQPIGIDIEEIFSAQTA RELTDNIITPAEHKRLADCGLAFPLALTLAFSAKESAFKASEIQAAQGFLDYQIISWNKQ QIIIRLEDEQFAVHWQIKEKIVITLCQHD >gi|296918679|gb|GG773021.1| GENE 451 456578 - 456730 149 50 aa, chain - ## HITS:1 COG:no KEGG:EFER_2525 NR:ns ## KEGG: EFER_2525 # Name: not_defined # Def: small toxic membrane polypeptide, HokE-like protein (partial) # Organism: E.fergusonii # Pathway: not_defined # 1 50 34 83 83 91 100.0 1e-17 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK >gi|296918679|gb|GG773021.1| GENE 452 457184 - 458302 865 372 aa, chain + ## HITS:1 COG:ECs0619 KEGG:ns NR:ns ## COG: ECs0619 COG2170 # Protein_GI_number: 15829873 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 778 98.0 0 MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNQITAGEVKHDITESMLE LATDVCRDINQAAGQFSAMQKVVLQAAADHHLEICGGGTHPFQKWQRQEVCDNERYQRTL ENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFAS SRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRV MDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPH TGDRRSLTEATLRLLEKIAPSAHKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIG LVKKHCEIWAGE >gi|296918679|gb|GG773021.1| GENE 453 458368 - 458616 262 82 aa, chain + ## HITS:1 COG:no KEGG:ECP_0611 NR:ns ## KEGG: ECP_0611 # Name: not_defined # Def: protein of unknown function (DUF1158); region: DUF1158; pfam06643 # Organism: E.coli_536 # Pathway: not_defined # 1 82 1 82 82 103 98.0 2e-21 MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVTTFHLMDLSQLYTLLFCLWFL VLGAIEYFVLRFIWRRWFSLAD >gi|296918679|gb|GG773021.1| GENE 454 458681 - 459064 389 127 aa, chain + ## HITS:1 COG:ECs0617 KEGG:ns NR:ns ## COG: ECs0617 COG2315 # Protein_GI_number: 15829871 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 121 1 121 122 247 100.0 4e-66 MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQK SLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRVR PDSTVNQ >gi|296918679|gb|GG773021.1| GENE 455 459143 - 459796 794 217 aa, chain + ## HITS:1 COG:nfnB KEGG:ns NR:ns ## COG: nfnB COG0778 # Protein_GI_number: 16128561 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli K12 # 1 217 1 217 217 416 98.0 1e-116 MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARV AKSAADNYVFNERKMLDASHVVVFCAKTAMDDAWLKLVVDQEDADGRFATPEAKAANDKG RKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGFDAAILDEEFGLKE KGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV >gi|296918679|gb|GG773021.1| GENE 456 459921 - 461168 1197 415 aa, chain + ## HITS:1 COG:ybdG KEGG:ns NR:ns ## COG: ybdG COG0668 # Protein_GI_number: 16128560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli K12 # 1 415 1 415 415 801 99.0 0 MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIFLHWVVLRTFEKRAIASSRLWL QIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFSLLD VILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAAVLM LVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIP TWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRFLDEDEMQRLNKAHLLKPYLTSRHQ EINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPGDNGLP LEIYAFTNTVVWLEYESIQADIFDHIFAIVEEFGLRLHQSPTGNDIRSLAGAFKQ >gi|296918679|gb|GG773021.1| GENE 457 461280 - 462656 1668 458 aa, chain - ## HITS:1 COG:pheP KEGG:ns NR:ns ## COG: pheP COG1113 # Protein_GI_number: 16128559 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 458 1 458 458 838 99.0 0 MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGY GVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELT AAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGL WLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEK SIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVI LVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINY LLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKALLYPFGNYLCIAF LGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKTLRRK >gi|296918679|gb|GG773021.1| GENE 458 462758 - 465901 3349 1047 aa, chain - ## HITS:1 COG:ybdE KEGG:ns NR:ns ## COG: ybdE COG3696 # Protein_GI_number: 16128558 # Func_class: P Inorganic ion transport and metabolism # Function: Putative silver efflux pump # Organism: Escherichia coli K12 # 1 1047 1 1047 1047 2026 99.0 0 MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSDVQVIIKTSYPGQAPQI VENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDPYWARSRVLEYLNQVQGK LPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQDWFLKYELKTIPDVAEVASV GGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAGGSSIELAEAEYMVRASGYLQTL DDFNHIVLKASENGVPVYLRDVAKVQVGPEMRRGIAELNGEGEVAGGVVILRSGKNAREV IAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHV RSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEE WQHQHPDATLDNKTRWQVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGRLFGPLAF TKTYAMAGAALLAIVVIPILMGYWIRGKIPPESSNPLNRFLIRVYHPLLLKVLHWPKTTL LVAALSVLTVLWPLNKVGGEFLPQINEGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVP EVARVFGKTGKAETATDSAPLEMVETTIQLKPQDQWRPGMTMDKIIEELDNTVRLPGLAN LWVPPIRNRIDMLSTGIKSPIGIKVSGTVLADIDTMAEQIEEVARTVPGVASALAERLEG GRYINVEINREKAARYGMTVADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSP QALRQLPILTPMKQQITLADVADVKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDL QKAIAEKVQLKPGTSVAFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLI ISSVPFALVGGIWLLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAEPSLNN PQTFSEQKLDEALYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGM ITAPLLSLFIIPAAYKLMWLHRHRVRK >gi|296918679|gb|GG773021.1| GENE 459 465913 - 467136 1359 407 aa, chain - ## HITS:1 COG:ECs0612 KEGG:ns NR:ns ## COG: ECs0612 COG0845 # Protein_GI_number: 15829866 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 407 1 407 407 770 99.0 0 MKKIALIIGSMIAGGIISAAGFTWFAKAELPAEKTSTAERKVLFWYDPMYPNTRFDKPGK SPFMDMDLVPKYADEESSASGVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYQ YAIVQARAAGFIDKVYPLTVGDKVQKGAPLLDLTIPDWVEAQSEYLLLRETGGTATQTEG ILERLRLAGMPEADIRRLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQG MDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEV DNADEALKPGMNAWLQLNTASEPMLLIPSQALIDTGNEQRVITVDADGRFVPKRVAVFQA SQGVTALRSGLAEGEKVVSSGLFLIDSEANISGALERMRSESATHAH >gi|296918679|gb|GG773021.1| GENE 460 467152 - 467484 530 110 aa, chain - ## HITS:1 COG:ylcC KEGG:ns NR:ns ## COG: ylcC COG5569 # Protein_GI_number: 16128556 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 110 1 110 110 195 98.0 2e-50 MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVVKGVDLESKKITIHHDP IAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGSLSLLQDIKVSQ >gi|296918679|gb|GG773021.1| GENE 461 467508 - 468890 473 460 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 12 459 11 457 460 186 28 1e-45 MSPCKLLPFCVALALTGCSLAPDYQRPAMPVPQQFSLSQNGLVNAADNYQNAGWRTFFVD NQVKTLISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEDSGSWSGNLKGDSAT TREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAY AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN ALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAA RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ QSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYL EVLDAERSLFATRQTLLDLNYARQVNEISLYTALGGGWQQ >gi|296918679|gb|GG773021.1| GENE 462 469047 - 469730 683 227 aa, chain + ## HITS:1 COG:ECs0609 KEGG:ns NR:ns ## COG: ECs0609 COG0745 # Protein_GI_number: 15829863 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 227 1 227 227 432 100.0 1e-121 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGW DIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGA AVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLEFFLRHQGEVLPRSLIASQVW DMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVGYMLEVPDGQ >gi|296918679|gb|GG773021.1| GENE 463 469720 - 471162 1163 480 aa, chain + ## HITS:1 COG:ybcZ KEGG:ns NR:ns ## COG: ybcZ COG0642 # Protein_GI_number: 16128553 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 480 1 480 480 925 98.0 0 MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFAEQDINDLKEISATLER VLNHPDETQARRLMTLEDIVSGYSNVLISLADSHGKTVYHSPGAPDIREFTRDAIPDKDA QGGEVYLLSGPTMMMPGHGHGHMEHSNWRMINLPVGPLVDGKPIYTLYIALSIDFHLHYI NDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSRQIQNITSKDLDVRLDPQTVPIE LEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELEDV LYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKKMLNLADEVGKVFDFFEALAEDRGVEL RFVGDECQVAGDPLMLRRALSNLLSNALRYTPTGETIVVRCQTVDHLVQVTVENPGTPIA PEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHKGTVAVTSDVRGTRFVIILPA >gi|296918679|gb|GG773021.1| GENE 464 471312 - 473549 1815 745 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0605 NR:ns ## KEGG: ECS88_0605 # Name: nfrB # Def: bacteriophage N4 adsorption protein B # Organism: E.coli_S88 # Pathway: not_defined # 1 745 1 745 745 1517 100.0 0 MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRRIKRKLSVYRRYPRMSY RELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPDTQRDVDEV CARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR LFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSELHGKDVPVREALAGQVPSAGVGT CFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKEKGMTEIFVRFPVVDEAKEREQRKF LQHARTSNMICVREYFPDTFSTAVRQKSRWIIGIVFQGFKTHKWTSSLTLNYFLWRDRKG AISNFVSFLAMLVMIQLLLLLAYESLWPDAWHFLSIFSGSAWLMTLLWLNFGLMINRIVQ RVIFVTGYYGLTQGLLSVLRLFWGNLINFMANWRALKQVLQHGDPRRVAWDKTTHDFPSV TGDTRSLRPLGQILLENQVITEEQLDAALRNRVEGLRLGGSMLMQGLISAEQLAQALAEQ NGVAWESIDAWQIPSSLIAEMPASVALHYAVLPLRLDNDELIVGSEDGIDPVSLAALTRK VGRKVRYVIVLRGQIVTGLRHWYARRRGHDPRAMLYNAVQHQWLTEQQAGEIWRQYVPHQ FLFAEILTTLGHINRSAINVLLLRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVS MQSLLLKAGLNTEQVAQLESENEGE >gi|296918679|gb|GG773021.1| GENE 465 473536 - 476508 2341 990 aa, chain + ## HITS:1 COG:nfrA KEGG:ns NR:ns ## COG: nfrA COG0457 # Protein_GI_number: 16128551 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli K12 # 1 990 1 990 990 1840 98.0 0 MKENNLNRVIGWSGLLLTSLLSTSALADNIGTSAEELGLSDYRHFVIYPRLDKALKAQKN NDEATAIREFEYIHQQVPDNIPLTLYLAEAYRHFGHDDRARLLLEDQLKRHPGDDRLERS LVAIPVEVKSVTTVEELLAQQKACDAAPTLRCRSEVGQNALRLAQLPVARAQLNDATFAA SPEGKTLRTDLLQRAIYLKQWSQADTLYNEARQQNTLSAAERRQWFDVLLAAQLDDRILA LQSQGIFTDPQSYITYATALAYRGEKARLQHYLIENTPLFTTDAQEKSWLYLLSKYSGNP VQALANYTVQFADNRQYVVGATLPVLLKEGQYGAAQKLLATLPANEMLEERYAVSVATRN KAEALRLARLLYQQEPANLTRLDQLTWQLMQNEQSREAADLLLQRYPFQGDARVSQTLMA RLASLLESHPYLATPAKVAILSKPLPLAEQRQWQSQLPGIADNCPAIVRLLGDMSPSYDA AAWNRLAKCYRDTLPGVALYAWLQAEQRQPDAWQHRAVAYQAYQVEDYATALAAWQKISL HDMSNEDLLAAANTAQAAGNGAARDRWLQQAEQRGLGNNALYWWLHAQRYIPGQPELALN DLTRSINIAPSANAYVARATIYRQRHNVPAAVSDLRAALELEPNNSNTQAALGYALWDSG DIAQSREMLEQAHKGLPDDPALIRQLAYVNQRLDDMPATQHYARLVIDDIDNQALITPLT PEQNQQRFNFRRLHEEVGRRWTFSFDSSIGLRSGAMSTANNNVGGAAPGKSYRSYGQLEA EYRLGRNMLLEGDLLSVYSRVFADTGENGVMMPVKNPMSGTGLRWKPLRDQIFFLAVEQQ LPLNGQNGASDTMLRASASFFNGGKYSDEWHPNGSGWFAQNLYLDAAQYVRQDIQAWTAD YRVSWHQKVANGQTIEPYAHLQDNGYRDKGTQGAQLGGVGVRWNIWTGETHYDAWPHKVS LGVEYQHTFKAINQRNGERNNAFLTIGVHW >gi|296918679|gb|GG773021.1| GENE 466 476509 - 477399 643 296 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0603 NR:ns ## KEGG: ECS88_0603 # Name: ybcH # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 296 1 296 296 571 100.0 1e-161 MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRLQGFDTLVLQWT RYGDAFTQPEQRALLFKRAAAAQQAGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAA DLQQARLWSAVPGVTPDGWYISAEIDDLNWCSEAARQPLLTWLNNAQRLISDVSAKPVYI SSFFAGNMSPDGYRQLLEQVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSSAPAS GIVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDTLYFSLRYLPVAQSILEY >gi|296918679|gb|GG773021.1| GENE 467 478057 - 479010 622 317 aa, chain + ## HITS:1 COG:ECs1663 KEGG:ns NR:ns ## COG: ECs1663 COG4571 # Protein_GI_number: 15830917 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protease # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 597 98.0 1e-170 MRAKLLGIVLTPPIAISSFASTETLSFTPDNINADISLGTLSGKTKERVYLAEEGGRKVS QLDWKFNNAAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMVDQDWMDSSNPGTWTDESR HPDTQLNYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGGSYIYSSEEGFRDDI GSFPNGERAIGYKQRFKIPYIGLTGSYRYEDFELGGIFKYSGWVEASDNDEHYDPGKRIT YRSKVKDQNYYSVAVNAGYYVTPNAKVYVEGAWNRVTNKKGNTSLYDHNDNTSDYSKNGA GIENYNFITTAGLKYTF Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:18:06 2011 Seq name: gi|296918678|gb|GG773022.1| Escherichia coli MS 110-3 genomic scaffold Scfld316, whole genome shotgun sequence Length of sequence - 43319 bp Number of predicted genes - 45, with homology - 44 Number of transcription units - 28, operones - 10 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 866 297 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 + Prom 1248 - 1307 2.5 2 2 Tu 1 . + CDS 1328 - 4855 1837 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits + Term 5027 - 5059 0.8 3 3 Tu 1 . - CDS 4964 - 6151 557 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Term 6525 - 6559 2.2 4 4 Tu 1 . - CDS 6638 - 7384 425 ## COG3637 Opacity protein and related surface antigens - Prom 7426 - 7485 4.9 5 5 Op 1 . - CDS 7744 - 8754 163 ## APECO1_3527 PapG 6 5 Op 2 . - CDS 8798 - 9046 154 ## ECIAI39_4594 fimbrial adapter PapF - Prom 9276 - 9335 4.2 7 6 Op 1 . - CDS 9373 - 9894 159 ## ECS88_3259 fimbrial tip protein PapE 8 6 Op 2 . - CDS 9921 - 10457 287 ## ECUMN_3334 Fimbrial adapter PapK 9 6 Op 3 . - CDS 10467 - 11048 -38 ## ECS88_3261 protein PapJ precursor, P pilus assembly 10 6 Op 4 10/0.000 - CDS 11085 - 11804 585 ## COG3121 P pilus assembly protein, chaperone PapD 11 6 Op 5 . - CDS 11890 - 14409 1366 ## COG3188 P pilus assembly protein, porin PapC 12 6 Op 6 . - CDS 14459 - 15046 130 ## ECS88_3264 minor pilin protein PapH 13 6 Op 7 . - CDS 15109 - 15657 314 ## COG3539 P pilus assembly protein, pilin FimA - Prom 15781 - 15840 4.1 - Term 15702 - 15742 4.2 14 7 Tu 1 . - CDS 15864 - 16178 168 ## ECUMN_3340 pap operon regulatory protein PapB - Prom 16234 - 16293 3.2 + Prom 16524 - 16583 9.7 15 8 Tu 1 . + CDS 16665 - 16886 140 ## ECS88_3267 PAP operon regulatory protein PapI + Term 16926 - 16989 -0.6 - Term 17167 - 17210 2.0 16 9 Op 1 . - CDS 17229 - 17465 237 ## COG3311 Predicted transcriptional regulator 17 9 Op 2 . - CDS 17534 - 18109 542 ## ECS88_3270 hypothetical protein 18 10 Tu 1 . - CDS 18367 - 18933 313 ## ECS88_3271 hypothetical protein - Prom 19012 - 19071 1.9 + Prom 18916 - 18975 2.9 19 11 Op 1 . + CDS 19220 - 19426 138 ## ECP_2980 hypothetical protein 20 11 Op 2 23/0.000 + CDS 19371 - 19649 181 ## COG2963 Transposase and inactivated derivatives 21 11 Op 3 . + CDS 19607 - 20320 157 ## COG2801 Transposase and inactivated derivatives - Term 20881 - 20929 3.2 22 12 Tu 1 . - CDS 20930 - 22294 1169 ## COG2271 Sugar phosphate permease - Prom 22491 - 22550 5.1 + Prom 22363 - 22422 4.9 23 13 Op 1 3/0.200 + CDS 22639 - 23910 744 ## COG1840 ABC-type Fe3+ transport system, periplasmic component 24 13 Op 2 3/0.200 + CDS 23907 - 25916 1280 ## COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system 25 13 Op 3 . + CDS 25906 - 27153 809 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Term 27246 - 27284 7.3 + Prom 27181 - 27240 4.1 26 14 Tu 1 . + CDS 27446 - 27637 76 ## ECS88_3281 hypothetical protein + Term 27672 - 27715 2.6 27 15 Tu 1 . - CDS 27746 - 27874 74 ## ECS88_3283 hypothetical protein - Prom 27915 - 27974 2.5 28 16 Op 1 . - CDS 28134 - 28775 269 ## ECS88_3284 hypothetical protein 29 16 Op 2 . - CDS 28799 - 29068 107 ## ECS88_3285 hypothetical protein - Prom 29118 - 29177 2.7 - Term 29127 - 29159 0.3 30 17 Op 1 8/0.000 - CDS 29229 - 29834 361 ## COG1475 Predicted transcriptional regulators 31 17 Op 2 . - CDS 29819 - 31051 547 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase - Prom 31121 - 31180 6.4 - Term 31088 - 31127 0.0 32 18 Tu 1 . - CDS 31187 - 31465 122 ## ECS88_3289 hypothetical protein - Prom 31594 - 31653 5.2 33 19 Tu 1 . - CDS 32025 - 33473 323 ## APECO1_3500 hypothetical protein - Prom 33494 - 33553 1.5 34 20 Op 1 23/0.000 - CDS 33644 - 34531 611 ## COG2801 Transposase and inactivated derivatives 35 20 Op 2 . - CDS 34531 - 34806 192 ## COG2963 Transposase and inactivated derivatives - Prom 34929 - 34988 3.3 36 21 Tu 1 2/0.400 + CDS 34819 - 35313 242 ## COG3328 Transposase and inactivated derivatives + Prom 35317 - 35376 2.2 37 22 Tu 1 . + CDS 35458 - 35910 189 ## COG3328 Transposase and inactivated derivatives 38 23 Tu 1 . - CDS 36250 - 38298 1169 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 38345 - 38404 5.1 - Term 38624 - 38671 6.7 39 24 Op 1 . - CDS 38774 - 38992 64 ## ECS88_3296 hypothetical protein - Term 39008 - 39048 3.0 40 24 Op 2 . - CDS 39080 - 39820 242 ## ECS88_3297 hypothetical protein - Prom 39870 - 39929 2.7 + Prom 39826 - 39885 2.4 41 25 Tu 1 . + CDS 39925 - 40173 163 ## ECS88_3298 hypothetical protein 42 26 Op 1 . - CDS 40953 - 41126 68 ## ECS88_3301 hypothetical protein 43 26 Op 2 . - CDS 41114 - 41317 64 ## - Prom 41381 - 41440 5.7 + Prom 41281 - 41340 4.5 44 27 Tu 1 . + CDS 41512 - 42300 228 ## ECS88_3302 hypothetical protein + Term 42342 - 42377 -1.0 - Term 42201 - 42241 1.2 45 28 Tu 1 . - CDS 42297 - 42959 152 ## ECS88_3303 hypothetical protein - Prom 43044 - 43103 2.9 Predicted protein(s) >gi|296918678|gb|GG773022.1| GENE 1 3 - 866 297 287 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 16 268 158 402 406 119 30 4e-26 NRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGAL TTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEIDID NAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHD PRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRDAVERQMSHQERNG VRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPFEYAKINNPLK >gi|296918678|gb|GG773022.1| GENE 2 1328 - 4855 1837 1175 aa, chain + ## HITS:1 COG:STM4489 KEGG:ns NR:ns ## COG: STM4489 COG1112 # Protein_GI_number: 16767733 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Salmonella typhimurium LT2 # 5 1175 1 1171 1171 2244 95.0 0 MGLVMDENALGLASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFEG EKDDVETVDVVLRPKVYFRLLQHGKDRSAGAPDIVTPLVTPALLSREGFLYPTPATSIPR DLLEPLPKGAFSIGEIGQYDKYKTIHTSFSINFDDSIDKTAETDEEREARYAALQQEWRQ YLDDSERLLKNVAGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPL FNRFASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGP PGTGKTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAG RWLPELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKE CSSPEKVIELLHGQLVAKSEQLKRLNATWQTLSQVRAARELIANDIEQYLDNLNKLLSGQ EQKVTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWS DPETIERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELS FSQADELADTQIRFPAFLLTTHYWEGRWLMDMARIDDLQEEKKKKGAKGVTARWQRRMKL TPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKK ALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMK IAQFASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGY LHIDGKGEQASSGSRYNLLEAETIAAWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTI KQALGKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAV SRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTSETKIYTL HGVEQHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMIAACSRGINVTIVTDRSY NTEHKDFEKRKEKQQNLKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSAT REARYERYDTSMVYCGDNLKGEIEAIYNSLERRQV >gi|296918678|gb|GG773022.1| GENE 3 4964 - 6151 557 395 aa, chain - ## HITS:1 COG:yjgX KEGG:ns NR:ns ## COG: yjgX COG2194 # Protein_GI_number: 16132096 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 98 245 1 148 148 262 91.0 7e-70 MIPVYHFLVSAAIQVFMVIFWRTHRRGHRNWLALLLFVLCSVNSWPLRMVKGTVVGTTDT LREMQRYKQLNQHGADNWKILPGVPLYDTIVIVTGESVRRDYMSVYGYPVPTTPWLNTAP GLFIDGYTSAAASTVPSLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKLGEHD TRISVIASDAEHTVFLKKGSFASRKTDDMLLLQETERALADKSSPKVIFLHMMGSHPNPC DRLHSWPNHYLEQYPRKVACYLASISKLDNFLGQLDGILRRHSRHFAMLYFSDHGLSVSD SANPVHHDGHVQGGYSVPLIITASDITSHQSVSRKISARHFAGIFQWLTGIRTENIPPFN PLTDEDNEPVMVFNGERNVPADSLKPQPLILPDRR >gi|296918678|gb|GG773022.1| GENE 4 6638 - 7384 425 248 aa, chain - ## HITS:1 COG:STM0306 KEGG:ns NR:ns ## COG: STM0306 COG3637 # Protein_GI_number: 16763689 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Salmonella typhimurium LT2 # 1 248 1 239 239 131 35.0 1e-30 MKKVIVVSALAMAGVFSAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDFGDDVYKYKG GDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGDGGREDTQ NRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARIHHKATYTDTSWNKSGEVSDISALHY SGYDNNFAWSIGAGVRYDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKSEADVKSHDI MFGVTYNF >gi|296918678|gb|GG773022.1| GENE 5 7744 - 8754 163 336 aa, chain - ## HITS:1 COG:no KEGG:APECO1_3527 NR:ns ## KEGG: APECO1_3527 # Name: papG # Def: PapG # Organism: E.coli_APEC # Pathway: not_defined # 1 336 1 336 336 693 99.0 0 MKKWFPALLFSLCVSGESSAWNNIVFYSLGNVNSYQGGNVVITQRPQFITSWRPGIATVT WNQCNGPGFADGSWAYYREYIAWVVFPKKVMTKNGYPLFIEVHNKGSWSEENTGDNDSYF FLKGYKWDERAFDAGNLCQKPGETTRLTEKFDDIIFKVALPADLPLGDYSVTIPYTSGMQ RHFASYLGARFKIPYNVAKTLPRENEMFFLFKNIGGCRPSAQSLEIKHGDLSINSANNHY AAQTLSVSCDVPANIRFMLLRNTTPTYSHGKKFSVGLGHGWDSIVSVNGVDTGETTMRWY KAGTQNLTIGSRLYGESSKIQPGVLSGSATLLMILP >gi|296918678|gb|GG773022.1| GENE 6 8798 - 9046 154 82 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_4594 NR:ns ## KEGG: ECIAI39_4594 # Name: papF # Def: fimbrial adapter PapF # Organism: E.coli_IAI39 # Pathway: not_defined # 1 82 85 166 166 137 100.0 1e-31 MAGQTNVLATNIANFGIALYQGKGMSTPLTLGNGSGNGYRVTAGLDTARSTFTFTSVPFR NGSRTLNGGDFRTTASMSMIYN >gi|296918678|gb|GG773022.1| GENE 7 9373 - 9894 159 173 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3259 NR:ns ## KEGG: ECS88_3259 # Name: papE # Def: fimbrial tip protein PapE # Organism: E.coli_S88 # Pathway: not_defined # 1 173 7 179 179 314 100.0 1e-84 MKKIRGLCLPVMLGAVLMSQHVHAVDNLTFRGKLIIPACTVSNTTVDWQDVEIQTLSQNG NHEKEFTVNMRCPYNLGTMKVTITATNTYNNAILVQNTSNTSSDGLLVYLYNSNAGNIGT AITLGTPFTPGKITGNNADKTISLHAKLGYKGNMQNLIAGPFSATATLVASYS >gi|296918678|gb|GG773022.1| GENE 8 9921 - 10457 287 178 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_3334 NR:ns ## KEGG: ECUMN_3334 # Name: papK # Def: Fimbrial adapter PapK # Organism: E.coli_UMN026 # Pathway: not_defined # 1 178 2 179 179 327 100.0 1e-88 MIKSTGALLLFAALSAGQAIASDVAFRGNLLDRPCHVSGDSLNKHVVFKTRASRDFWYPP GRSPTESFVIRLENCHATAVGKIVTLTFKGTEEAALPGHLKVTGVNAGRLGIALLDTDGS SLLKPGASHNKGQGEKVTGNSLELPFGAYVVATPEALRTKSVVPGDYEATATFELTYR >gi|296918678|gb|GG773022.1| GENE 9 10467 - 11048 -38 193 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3261 NR:ns ## KEGG: ECS88_3261 # Name: papJ # Def: protein PapJ precursor, P pilus assembly # Organism: E.coli_S88 # Pathway: not_defined # 1 193 1 193 193 378 100.0 1e-104 MVVNKTTAVLYLIALSLSGFIHTFLRAEERGIYDDVFTADELHHYRINERGGRTGSLAVS GALLSSPCTLVSNEVPLSLRPENHSASAGAPLMLRLAGCGDGGALQPGKRGVAMTVSGSL VTGPGTGSALLPDRKLSGCDHLVIHDGDTFLLCRPDRRQEEMLAAWRKRATQEGEYSDAR SNPAMLRLSIKYE >gi|296918678|gb|GG773022.1| GENE 10 11085 - 11804 585 239 aa, chain - ## HITS:1 COG:YPO0699 KEGG:ns NR:ns ## COG: YPO0699 COG3121 # Protein_GI_number: 16121020 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Yersinia pestis # 6 237 7 237 239 283 59.0 2e-76 MIRKKILMAAIPLFVISGADAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIEN ENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPRSEK ANVLQIALQTKIKLFYRPAAIKTRPNEVWQDQLILNKVSGGYRIENPTPYYVTVIGLGGS EKQAEEGEFETVMLSPRSEQTVKSANYNTPYLSYINDYGGRPVLSFICNGSRCSVKKEK >gi|296918678|gb|GG773022.1| GENE 11 11890 - 14409 1366 839 aa, chain - ## HITS:1 COG:YPO0698 KEGG:ns NR:ns ## COG: YPO0698 COG3188 # Protein_GI_number: 16121019 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Yersinia pestis # 1 835 1 822 826 771 48.0 0 MRGMKDRIPFAVNNITCVILLSLFCNAASAVEFNTDVLDAADKKNIDFTRFSEAGYVLPG QYLLDVIVNGQSISPASLQISFVEPALSGDKAEKKLPQACLTSDMVRLMGLTAESLDKVV YWHDGQCADFHGLPGVDIRPDTGAGVLRINMPQAWLEYSDATWLPPSRWDDGIPGLMLDY NLNGTVSRNYQGGDSHQFSYNGTVGGNLGPWRLRADYQGSQEQSRYNGEKTTNRNFTWSR FYLFRAIPRWRANLTLGENNINSDIFRSWSYTGASLESDDRMLPPRLRGYAPQITGIAET NARVVVSQQGRVLYDSMVPAGPFSIQDLDSSVRGRLDVEVIEQNGRKKTFQVDTASVPYL TRPGQVRYKLVSGRSRGYGHETEGPVFATGEASWGLSNQWSLYGGAVLAGDYNALAAGAG WDLGVPGTLSADITQSVARIEGERTFQGKSWRLSYSKRFDNADADITFAGYRFSERNYMT MEQYLNARYRNDYSSREKEMYTVTLNKNVADWNTSFNLQYSRQTYWDIRKTDYYTVSVNR YFNVFGLQGVAVGLAASRSKYLGRDNDSAYLRISVPLGTGTASYSGSMSNDRYVNMAGYT DTFNDGLDSYSLNAGLNSGGGLTSQRQINAYYSHRSPLANLSANIASLQKGYTSFGVSAS GGATITGKGAALHAGGMSGGTRLLVDTDGVGGVPVDGGQVVTNRWGTGVVTDISSYYRNT TSVDLKRLPDDVEATRSVVESALTEGAIGYRKFSVLKGKRLFAILRLADGSQPPFGASVT SEKGRELGMVADEGLAWLSGVTPGETLSVNWDGKIQCQVNVPETAISDQQLLLPCTPQK >gi|296918678|gb|GG773022.1| GENE 12 14459 - 15046 130 195 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3264 NR:ns ## KEGG: ECS88_3264 # Name: papH # Def: minor pilin protein PapH # Organism: E.coli_S88 # Pathway: not_defined # 1 195 1 195 195 413 100.0 1e-114 MKNFCVLFVMYFWSTLLHAVSSEPFPPPGMTLPEYWGEEHVWWDGRAAFHGEVVRPACTL AMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFNSQGGNLFSDSRIRVTFDGVR GETPDKFNLSGQAKGINLQIADARGNIARAGKVMPAIPLTGNEEALDYTLRIVRNGKKLE AGNYFAVLGFRVDYE >gi|296918678|gb|GG773022.1| GENE 13 15109 - 15657 314 182 aa, chain - ## HITS:1 COG:YPO2759 KEGG:ns NR:ns ## COG: YPO2759 COG3539 # Protein_GI_number: 16122963 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Yersinia pestis # 3 181 6 175 176 80 36.0 2e-15 MIKSVIAGAVAMAVVSFGVNAAPTIPQGQGKVTFNGTVVDAPCSISQKSADQSIDFGQLS KSFLEAGGTSKPMDLDIELVNCDITAFKQGQAAKNGKVQLSFTGPQVTGQAEELATNGGT GTAIVVQAAGKNVSFDGTAGDAYPLKDGDNVLHYTALVKKANGGTVSEGAFSAVATFNLS YQ >gi|296918678|gb|GG773022.1| GENE 14 15864 - 16178 168 104 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_3340 NR:ns ## KEGG: ECUMN_3340 # Name: papB # Def: pap operon regulatory protein PapB # Organism: E.coli_UMN026 # Pathway: not_defined # 1 104 1 104 104 198 100.0 5e-50 MAHHEVISRSGNAFLLNIRESVLLPGSMSEMHFFLLIGISSIHSDRVILAMKDYLVGGHS RKEVCEKYQMNNGYFSTTLGRLIRLNALAARLAPYYTDESSAFD >gi|296918678|gb|GG773022.1| GENE 15 16665 - 16886 140 73 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3267 NR:ns ## KEGG: ECS88_3267 # Name: papI # Def: PAP operon regulatory protein PapI # Organism: E.coli_S88 # Pathway: not_defined # 1 73 5 77 77 135 100.0 6e-31 MKNEILEFLNRHDGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWLLK GEKQAGQSCSSTT >gi|296918678|gb|GG773022.1| GENE 16 17229 - 17465 237 78 aa, chain - ## HITS:1 COG:Z1188 KEGG:ns NR:ns ## COG: Z1188 COG3311 # Protein_GI_number: 15800709 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 1 65 1 64 65 115 90.0 2e-26 MLTSITGHDSVLLRADDPLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKS EVEQWMQQRIEESRGAAA >gi|296918678|gb|GG773022.1| GENE 17 17534 - 18109 542 191 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3270 NR:ns ## KEGG: ECS88_3270 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 191 11 201 201 398 100.0 1e-110 MNAIPYFDDSLAPFWPSYQSKVIGVLERALREQSCSRVRRILLRLPWEHDNAFNSRQTWF GMDFIETVSALMNAKPGRDLCWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNV LGFASPGEAAPYQKQITRDVVLDSRSPDCEDILKDLIWAFSDFARDRRGVCDPEARCLAG NPGYPGSAGLF >gi|296918678|gb|GG773022.1| GENE 18 18367 - 18933 313 188 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3271 NR:ns ## KEGG: ECS88_3271 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 188 1 188 188 395 100.0 1e-109 MPKSYTPNWFFTALLDNHINQMMARYSCLRALRMDFFYRKDTPDFLQPDHRWLELQLRML LEQVEQFENIVGFFWVIEWTADHGFHAHAVFWIDRQRVKKIYPFAERITECWRSITHNSG SAHCCTYQPHYTYNINIPVRHNEPESIDNIRGALHYLAKEEQKDGLCAYGCSEVPERPAA GRPRKLQK >gi|296918678|gb|GG773022.1| GENE 19 19220 - 19426 138 68 aa, chain + ## HITS:1 COG:no KEGG:ECP_2980 NR:ns ## KEGG: ECP_2980 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 68 1 68 68 108 77.0 8e-23 MYLKIRGRLGYMSNTSSNFEIAGVLLGKEVRKRKTPQKKNRNYSTDYGAWHDCVPRGTFA WHSAQPVV >gi|296918678|gb|GG773022.1| GENE 20 19371 - 19649 181 92 aa, chain + ## HITS:1 COG:yi21_g3 KEGG:ns NR:ns ## COG: yi21_g3 COG2963 # Protein_GI_number: 16129938 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 92 45 136 136 126 76.0 1e-29 MTVSHVARLHGIQPSLLFKWKKQYLEGSLTAVAAGEDVVPASELAAAIKQINQLQRLLGK KTMEVEILKEAVEYAQSRKWIAHVPLLPSDKE >gi|296918678|gb|GG773022.1| GENE 21 19607 - 20320 157 237 aa, chain + ## HITS:1 COG:ECs1564 KEGG:ns NR:ns ## COG: ECs1564 COG2801 # Protein_GI_number: 15830818 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 235 1 234 301 287 60.0 1e-77 MDSACALVTFGQGIAPVSRVLGVSRAQLTLRMKASDNKPDKRRQRRDEAADAEVLSRILD IIGDMPAYGYRRVWAILRRQSRNEGLPFVNAKRVYRIMSENSLLLLHDKPSRLQREHKGR ISVKESDQRWCSDGFEFGCDDGEKVRVTFALDCCDREAIDWAASTGGYDKATVQDVMSGA IEKGFGDKVPEEPIQWLTDNGSAYRAHETRQFARELNLEPCTTAVSSPQSNGMADGS >gi|296918678|gb|GG773022.1| GENE 22 20930 - 22294 1169 454 aa, chain - ## HITS:1 COG:STM2399 KEGG:ns NR:ns ## COG: STM2399 COG2271 # Protein_GI_number: 16765725 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Salmonella typhimurium LT2 # 1 447 1 447 463 803 90.0 0 MLSIFKTGQAADSVPAEKIQVTYRRYRMQALLSVFLGYLAYYIVRNNFTLSTPYLKEQLD LSATQIGVLSSCMLIAYGISKGVMSSLADKASPKVFMACGLVLCAIVNVGLGFSTAFWIF AALVILNGLFQGMGVGPSFITIANWFPRRERGRVGAFWNISHNIGGGIVAPIVGAAFALL GSEHWQSASYIVPACVAIVFAVIVLILGKGSPHQEGLPSLEEMMPEEKVVLNTRQTVKAP ENMSAFQIFCTYVLRNKNAWYVSLVDVFVYMVRFGMISWLPIYLLTVKHFSKEQMSVAFL FFEWAAIPSTLLAGWLSDKLFKGRRMPLAMICMALIFICLIGYWKSESLFMVTIFAAIVG CLIYVPQFLASVQTMEIVPSFAVGSAVGLRGFMSYIFGASLGTSLFGIMVDHIGWHGGFY LLGCGIICCIIFCWLSHRGAIELERHRAAYIKEH >gi|296918678|gb|GG773022.1| GENE 23 22639 - 23910 744 423 aa, chain + ## HITS:1 COG:STM2398 KEGG:ns NR:ns ## COG: STM2398 COG1840 # Protein_GI_number: 16765724 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 29 423 3 397 397 632 83.0 0 MTWITNRFFSWCEIGIKTMILLLLLMDVGAVRAQRNELVMATTFSPGAIAWIIQRWQTEP ESVMIRTLNRTSASLEQLLDTANVENVDLILTSSPMLLQHLQEHQKLAPFDDAPAESQNL VPESIRATSVAVAISGFGLLINRPALSVKHLPAPADWDDLALPIYQDALLMSSPSRSDTN HLMVESLLQQKGWVKGWETLLTSAGNLVTISSRSFGVADKIKSGLGVAGPVIDNYANLLL NDPHISFTYFPRSAVSPTYVAILRKSPHADAARRFIHYLLSPKGQRILADANTGKYPVTP LAADNPRATQQQLLMNQPPLNYHLILKRQRLVQRLFDTAISFRFAQLKDAWRALHSTEAR LKKPLPEIRALLTQMPVAAASSEDPVWLAQFDNKSFAEQQMMEWQLWFLNNQRLAIKKLE ELK >gi|296918678|gb|GG773022.1| GENE 24 23907 - 25916 1280 669 aa, chain + ## HITS:1 COG:STM2397 KEGG:ns NR:ns ## COG: STM2397 COG4192 # Protein_GI_number: 16765723 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating phosphoglycerate transport system # Organism: Salmonella typhimurium LT2 # 6 669 5 668 668 969 83.0 0 MKNITLWQRLRQVSISTSLRCAFLMGALLTLIVSSVSLYSWHEQSSQIRYSLDKYFPRIH SAFLIEGNLNLVVDQLNEFLQAPNTTVRLQLRTQIIQHLDTIERLSRGLSSRERQQLTVI LQDSRSLLSELDRALYNMFLLREKVSELSARIDWLHDDFTTELNSLVQDFTWQQGTLLDQ IASRQGDTAQYLKRSREVQNEQQQVYTLARIENQIVDDLRDRLNELKSGRDDDIQVETHL RYFENLKKTADENIRMLDDWPGTITLRQTIDELLDMGIVKNKMPDTMREYVAAQKALEDA SRTREATQGRFRTLLEAQLGSTHQQMQMFNQRMEQIVHVSGGLILVATALALLLAWVFNH YFIRSRLVKRFTLLNQAVVQIGLGGTETTIPVYGNDELGRIAGLLRHTLGQLNVQKQQLE QEITDRKVIEADLRATQDELIQTAKLAVVGQTMTTLAHEINQPLNALSMYLFTARRAIEQ TQKEQASMMLGKAEGVISRIDAIIRSLRQFTRRAELETSLHAVDLAQMFSAAWELLAMRH RSLQATLVLPQGTATVSGDEVRTQQVLVNVLANALDVCGQGAVITVNWQMQGKTLNVFIG DNGPGWPEALLPSLLKPFTTSKEVGLGIGLSICVSLMEQMKGELRLASTMTRNACVVLQF RLTDVEDAK >gi|296918678|gb|GG773022.1| GENE 25 25906 - 27153 809 415 aa, chain + ## HITS:1 COG:STM2396 KEGG:ns NR:ns ## COG: STM2396 COG2204 # Protein_GI_number: 16765722 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Salmonella typhimurium LT2 # 1 414 1 414 415 665 81.0 0 MLSSEYSILLIDDDADVLDAYTQLLEQSGYRVFACNNPFEAQAWIQPDWPGIVLSDVCMP GCSGIDLMMLFHQDDQQLPILLITGHGDVPMAVDAVKKGAWDFLQKPVDPGKLLSLVEEA LRQRQSIIARRQYCQQTLQVELIGRSEWINQYRRRLQQLSETDIAVWLYGAPGTGRMTGA RYLHQFGRNAQGEFVYRELTPDNAPQLNDFIALAQGGTLVLSHPEHLTREQQYHLVQLQS QEHRPFRLIGIGDTSLVELAASNHIIAELYYCFAMTQIACLPLTQRPDDIEPLFRHYLCK ACQRLNHPVPEVGKEMLKEMMRRMWPNNVRELANAAELFTVGVLPLAETANPLMHVGTPT PLDRRVEDAERQIITEALNIHQGRINEVAEYLQIPRKKLYLRMKKYGLSKEHYKI >gi|296918678|gb|GG773022.1| GENE 26 27446 - 27637 76 63 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3281 NR:ns ## KEGG: ECS88_3281 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 63 29 91 91 125 100.0 7e-28 MPVSMIRVVHDALYHWPLLSLMPGRDRFRCHFAPSEFELAAVVPDKDLDKYDEYLPESLL AKG >gi|296918678|gb|GG773022.1| GENE 27 27746 - 27874 74 42 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3283 NR:ns ## KEGG: ECS88_3283 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 42 66 107 107 69 100.0 5e-11 MGLKPGPKPIAKSVGKPDQRRRDNKDTPGNTPGLKPSKSTGK >gi|296918678|gb|GG773022.1| GENE 28 28134 - 28775 269 213 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3284 NR:ns ## KEGG: ECS88_3284 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 213 2 214 214 389 100.0 1e-107 MKKDMADSVSMTWQLLCDEHGFTREHYNQLKKFSPETLREIIAEIASCHPSTSVLLRNKW LTPPEDILEQITREYERRIQNCPSFRSEKEAESWLNELSFAVIAPLYRVVPEQTEQVESF VLQLIAEQERVWELILTNDGYSWHCALYDILFHLVLRNMEDQPEHQRQRITKILNESDTR RVAEEIKFRIQYLQDEEQKRVLSDLVNVLISKR >gi|296918678|gb|GG773022.1| GENE 29 28799 - 29068 107 89 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3285 NR:ns ## KEGG: ECS88_3285 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 89 14 102 102 168 100.0 5e-41 MVAQKLEAAGCWRRASARWLFVMGNVECTEAQREWLLLRRNYCLAQISSPPLPEKLDISE VAKAADATLRRMGIASPSGEIFRKGTPVC >gi|296918678|gb|GG773022.1| GENE 30 29229 - 29834 361 201 aa, chain - ## HITS:1 COG:ECs1387 KEGG:ns NR:ns ## COG: ECs1387 COG1475 # Protein_GI_number: 15830641 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 197 1 181 212 327 84.0 9e-90 MGDSVTPEVEVLSDMIRQYFSQERSEKETIQALNHLRRVLHEVSPFAQEPVDCGGGGSPF AQEPVDCVLWVKADEVVANDYNPNVMAPGEKKLLKQSLEKDGFTQPVVVSAEKNPYLVVD GFHRQLLGREAGTGKRLKGWLPVACINPERKGQATRMAATIRHNRARGKHQITSMSDIVR DLSRLGWTDERIGTEPGDGPG >gi|296918678|gb|GG773022.1| GENE 31 29819 - 31051 547 410 aa, chain - ## HITS:1 COG:ECs1386 KEGG:ns NR:ns ## COG: ECs1386 COG3969 # Protein_GI_number: 15830640 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 796 94.0 0 MNDNLLTEKVLTGENVLRAAIARIEWIFETFPSVCLSFSGGKDSTVLFHLLADVARRKKR RFSVLFIDWEAQYQCTIEHIQKMREMYHDVTETFYWVALPLTTVNGVSQFQPEWICWEPG VTWVRQPPEEAITDMTYFPFYRYAMTFEEFVPAFSSWFADNKCGVAVLTGVRADESLNRF MGLVSQRKLRYADDKPWTTASPEGFYYTMYPLYDWKTRDIWIYHTRTRAIYNPLYDLMYR AGVPLRNMRVCEPFGPEQRKGLWLYHVLEPDTWARMCERVSGAASGALYANESGAYFALR KRISKPAHHTWRSYAMFLLDVMPERTAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGC RDIPSWRRICKTLIKNDFWCRTLSFSPNKPRHYERYLQRMKERRNEWGIL >gi|296918678|gb|GG773022.1| GENE 32 31187 - 31465 122 92 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3289 NR:ns ## KEGG: ECS88_3289 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 92 126 217 217 191 100.0 7e-48 MIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSEHV NSWLVEPHEWVVINRSLTGIVTVPVSAIKISY >gi|296918678|gb|GG773022.1| GENE 33 32025 - 33473 323 482 aa, chain - ## HITS:1 COG:no KEGG:APECO1_3500 NR:ns ## KEGG: APECO1_3500 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 482 1 482 482 906 99.0 0 MRIRSLDDAATTEETLLTLALTPLVKELKALECNKESQISKVKAALVKAVNEIAEPHQER FSSISRQIQTGFQHVFPALGVQLSVEMNPPELKIDNLLKQGSGLLVKEAAGNYRIGQQGT GARRALFWAMLQVHNEISRQNEKREALLKSFREQLKKEVRKNVKSENINLLKQQIDAIEN GAPVPEDTDDPALPGYILLMDEPENALHPMAARAAQAHLYELGKHPDWQVLLTTHSPYFI NPLEDHTTIARMQRSTDGKSLSPRLYVADEANFSLDEKDNLQALQLTDIGFAEIFFGSYP IIVEGDTEHAAFISAITKEKHEMSGKVSIVRARGKAVLVPLIKMLNHFKADFGIVHDIDW PYRRDGSNNGSWTLNTIIRNEIIKCRNNGKKVYHRWSAPDFERFLGGEELGKDKPYTAFN RISRDEKLKEKIQNLIINLFEGECYDPDDFEPDDDFNAQLMEQLKIWAKNNGESDNVRVM GC >gi|296918678|gb|GG773022.1| GENE 34 33644 - 34531 611 295 aa, chain - ## HITS:1 COG:ECs1208 KEGG:ns NR:ns ## COG: ECs1208 COG2801 # Protein_GI_number: 15830462 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 295 2 296 296 573 97.0 1e-163 MPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRCTRAQRDDWLKREIQRVYDE NHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVVAGDRVN RQFVAERPDQLWVADSTYVSTWQGVVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQA LWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAESINGLYKAEV IHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEAEKAYYASIGNDDLAA >gi|296918678|gb|GG773022.1| GENE 35 34531 - 34806 192 91 aa, chain - ## HITS:1 COG:ECs1381 KEGG:ns NR:ns ## COG: ECs1381 COG2963 # Protein_GI_number: 15830635 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 91 18 108 108 162 96.0 2e-40 MVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELE RENRELHRSNNILRQASAYFAKAEFDRLWKK >gi|296918678|gb|GG773022.1| GENE 36 34819 - 35313 242 164 aa, chain + ## HITS:1 COG:SMa0384 KEGG:ns NR:ns ## COG: SMa0384 COG3328 # Protein_GI_number: 16262658 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 38 164 22 151 400 104 44.0 6e-23 MTDFGEKSVFLVILFTSFSGNLVSRIPGAVQSGQALTGKDDILTPLIKQLTETALAAELD SHLAQDVEVNRKNGSGKKTIKAPTGSFELATPRDRNGYFEPQLVKKHQTTLSDELERKII RLFALGMSYQDISREIEDLYAFSVSTATISAVTDKVIPELKQWQ >gi|296918678|gb|GG773022.1| GENE 37 35458 - 35910 189 150 aa, chain + ## HITS:1 COG:YPO0011 KEGG:ns NR:ns ## COG: YPO0011 COG3328 # Protein_GI_number: 16120364 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 149 202 350 402 182 57.0 2e-46 MSESEGANFWLSVLSDLQNRGVEDILIACVDGLTGFPEAINSIYPQTEVQLCVIHQIRNS IKYVASKHHKAFMADLKPVYRAVSKEAAETALDELEAKRGQQYPVVLQSWRRKRENLSAY FRYPANIRKVIYTTNAIESVHRKFRKLTKT >gi|296918678|gb|GG773022.1| GENE 38 36250 - 38298 1169 682 aa, chain - ## HITS:1 COG:AGl1858 KEGG:ns NR:ns ## COG: AGl1858 COG4771 # Protein_GI_number: 15891046 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 33 682 54 707 707 417 39.0 1e-116 MKNKYIIAPGIAVMCSAVISSGYASSDKKEDTLVVTASGFTQQLRNAPASVSVITSEQLQ KKPVSDLVDAVKDVEGISITGGNEKPDISIRGLSGDYTLILVDGRRQSGRESRPNGSGGF EAGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNNQTWDGVLGLGGIIQEHG KFGNSTTNDFYLSGPLIKDKLGLQLYGGMNYRKEDSISQGTPAKDNKNITATLQFTPTES QKFVFEYGKNNQVHTLTPGESLDAWTMRGNLKQPNSKRETHNSRSHWVAAWNAQGEILHP EIAVYQEKVIREVKSGKKDKYNHWDLNYESRKPEITNTIIDAKVTAFLPENVLTIGGQFQ HAELRDDSATGKKTTETQSVSIKQKAVFIENEYAATDSLALTGGLRLDNHEIYGSYWNPR LYAVYNLTDNLTLKGGIAKAFRAPSIREVSPGFGTLTQGGASIMYGNRDLKPETSVTEEI GIIYSNDSGFSASATLFNTDFKNKLTSYDIGTKDPVTGLNTFIYDNVGEANIRGVELATQ IPVYDKWHVSANYTFTDSRRKSDDESLNGKSLKGEPLERTPRHAANAKLEWDYTQDITFY SSLNYTGKQIWAAQRNGAKVPRVRNGFTSMDIGLNYLILPDTLINFAVLNVTDRKSEDID TIDGNWQVDEGRRYWANVRVSF >gi|296918678|gb|GG773022.1| GENE 39 38774 - 38992 64 72 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3296 NR:ns ## KEGG: ECS88_3296 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 72 1 72 72 145 100.0 7e-34 MYLLPFSCSYFTLRFHYLLLEVPIYFGAAHLRSFTEEDGGEPYDPGCWRGKVQDWDGAGL VVEDESEFLTGQ >gi|296918678|gb|GG773022.1| GENE 40 39080 - 39820 242 246 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3297 NR:ns ## KEGG: ECS88_3297 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 246 1 246 246 501 100.0 1e-141 MNQPIHNAYWLSRFDILLDSALAQHRAVSLIRVDLRFPEYMPVTIMDPDPDSAVISRFFA SLKAKIQAYQRKKRCANQRVHATSLRYFWCREFGKMYGRKHYHVILLLNKDTWCSIGDFS EPSSLATMIQEAWCSALHLEPWQGDGLVHFSRWTPSRKPASSDARPSSDDTPLSGGCSDT WKASDKKPGEAAVLWIKRGDVGALQKARNRASYLVKYETKLHNGSGQRNYGCSRGPGRLL DGRRSL >gi|296918678|gb|GG773022.1| GENE 41 39925 - 40173 163 82 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3298 NR:ns ## KEGG: ECS88_3298 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 82 1 82 82 99 100.0 5e-20 MIETEQTIPERKDNPAHSSKTRNNSMNGFKNDMDDEKSLKGKGSTEHSNKTPETQPERFL AMQINNNTKTYSLTTQLNHRAE >gi|296918678|gb|GG773022.1| GENE 42 40953 - 41126 68 57 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3301 NR:ns ## KEGG: ECS88_3301 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 57 1 57 57 110 100.0 1e-23 MLYVKGPGDDIISMAVILVVKRDHFPGVKDDMEVDKRFASDCLFWGLKYGGRKIIPE >gi|296918678|gb|GG773022.1| GENE 43 41114 - 41317 64 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSTTDHILLRCVVVLFDCSCGQINNLKSKSDSNLSVIVAIKTLTAHPVCEILSCRAVSN DRHACYM >gi|296918678|gb|GG773022.1| GENE 44 41512 - 42300 228 262 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3302 NR:ns ## KEGG: ECS88_3302 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 262 30 291 291 513 100.0 1e-144 MKQYKGGYNVNRYDWKNKTTEHLLNDNNLADNHIPEWIRKNEIAAFWFWLIMSHTVPEKL KLNNESEFNSALKGVIVMKDNPMTIIPSSHETRLNVIGKWINALILYGEADRIISIMHQN WLGLEKRNEAKWLKKNTEQLKWAWEYIDARISPTYLSWFNPVNDNERYIAIVVLLKMLFP TDTPCLLTPKEFHLGFAAKERFFDKMHNAFRKQFIDGKKDKRVQINVKISPSAKSALDRL TRERKTTQQAILEQLILYGRLD >gi|296918678|gb|GG773022.1| GENE 45 42297 - 42959 152 220 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3303 NR:ns ## KEGG: ECS88_3303 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 220 98 317 317 402 100.0 1e-111 MLIPRSIRRKVDGFRQSKGEATPKSAQPFTGSLYEVLSKESDSAKLDAWIAELPLNLQEE GKEISVMGFSPRAVARPVLRSASPTFELFYQEYQSLRLKSVFKFEPRFEQLLTRLSFRKQ SILRKQQYRVKSQLLERLGNVLFFTSLYNQGCLEEFINALVEKEDIYLKMSPGEEKVKAH QKMVNYIEAFCNKMTEKYLMPAASRHYKKKKIARSESGES Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:19:34 2011 Seq name: gi|296918677|gb|GG773023.1| Escherichia coli MS 110-3 genomic scaffold Scfld323, whole genome shotgun sequence Length of sequence - 43485 bp Number of predicted genes - 24, with homology - 24 Number of transcription units - 9, operones - 5 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 - CDS 1 - 520 277 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 2 1 Op 2 . - CDS 534 - 1187 204 ## COG2120 Uncharacterized proteins, LmbE homologs - Prom 1217 - 1276 6.5 + Prom 2402 - 2461 2.9 3 2 Op 1 8/0.000 + CDS 2481 - 3458 524 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase 4 2 Op 2 . + CDS 3443 - 4087 404 ## COG1475 Predicted transcriptional regulators + Term 4159 - 4194 -0.2 - Term 4380 - 4424 -0.8 5 3 Tu 1 . - CDS 4458 - 6605 875 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 6830 - 6889 8.2 + Prom 7533 - 7592 4.0 6 4 Tu 1 . + CDS 7678 - 7842 83 ## EcSMS35_1129 hypothetical protein + Term 8033 - 8068 -0.5 + Prom 8153 - 8212 6.1 7 5 Op 1 8/0.000 + CDS 8310 - 8852 432 ## COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 8 5 Op 2 11/0.000 + CDS 8849 - 9592 840 ## COG0368 Cobalamin-5-phosphate synthase 9 5 Op 3 4/0.000 + CDS 9604 - 10683 656 ## COG2038 NaMN:DMB phosphoribosyltransferase 10 5 Op 4 . + CDS 10748 - 11680 630 ## COG1376 Uncharacterized protein conserved in bacteria + Term 11701 - 11743 4.6 + Prom 11736 - 11795 6.1 11 6 Tu 1 . + CDS 11999 - 12397 108 ## UTI89_C2227 hypothetical protein 12 7 Op 1 11/0.000 - CDS 12705 - 13184 256 ## COG2801 Transposase and inactivated derivatives 13 7 Op 2 . - CDS 13289 - 13555 348 ## COG2801 Transposase and inactivated derivatives - Prom 13575 - 13634 4.2 14 8 Tu 1 . - CDS 13701 - 14435 174 ## COG2091 Phosphopantetheinyl transferase + Prom 15426 - 15485 4.8 15 9 Op 1 4/0.000 + CDS 15571 - 24684 4769 ## COG3321 Polyketide synthase modules and related proteins 16 9 Op 2 . + CDS 24725 - 27325 1217 ## COG3321 Polyketide synthase modules and related proteins 17 9 Op 3 . + CDS 27338 - 28204 327 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 18 9 Op 4 . + CDS 28234 - 28482 162 ## CKO_00863 hypothetical protein 19 9 Op 5 1/0.000 + CDS 28486 - 29616 826 ## COG1960 Acyl-CoA dehydrogenases 20 9 Op 6 . + CDS 29613 - 30881 685 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 21 9 Op 7 7/0.000 + CDS 30929 - 35725 2228 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 22 9 Op 8 7/0.000 + CDS 35775 - 38807 1926 ## COG3321 Polyketide synthase modules and related proteins 23 9 Op 9 . + CDS 38851 - 43248 2198 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 24 9 Op 10 . + CDS 43308 - 43485 84 ## ECP_1971 phosphopantetheine attachment site; region: PP-binding; cl09936 Predicted protein(s) >gi|296918677|gb|GG773023.1| GENE 1 1 - 520 277 173 aa, chain - ## HITS:1 COG:yaiP KEGG:ns NR:ns ## COG: yaiP COG1215 # Protein_GI_number: 16128348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 173 1 173 398 349 94.0 1e-96 MKTLLFIFMTIAMLLWFLSTLRRKPCQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCR VICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALMHGLKYATCDQVFLSDADT FVPPDNDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVKLPMIVMKR >gi|296918677|gb|GG773023.1| GENE 2 534 - 1187 204 217 aa, chain - ## HITS:1 COG:yaiS KEGG:ns NR:ns ## COG: yaiS COG2120 # Protein_GI_number: 16128349 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Escherichia coli K12 # 45 179 1 136 136 182 66.0 5e-46 MLNSTTSSGKRTGILAIGAHPDDIELGCGASLSYYSNEKVYIISVVMTPGCCGAEYIDRH KESQEALNMLGCNKLIPLNFEDTRLYLQIKEMISSLEYIIENETPQDVEITRVYTMNNTD RHQDHIAVYQASMVACRYIPQILGYETPSTCLSFLPQVFESVDEVHFNKKILALQKHKSQ IHRRYIQPEYIIAQAKFRGQQVSHSMCEGFVVHKMVL >gi|296918677|gb|GG773023.1| GENE 3 2481 - 3458 524 325 aa, chain + ## HITS:1 COG:ECs1386 KEGG:ns NR:ns ## COG: ECs1386 COG3969 # Protein_GI_number: 15830640 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Escherichia coli O157:H7 # 1 325 86 410 410 636 95.0 0 MYRDVTETFYWVALPLTTVNGVSQFQPEWICWEPGVEWVRQPPDDAITDMSYFPFYRYAM TFEEFVPAFSSWFAGNRCGVAILTGVRADESLNRFMGLVSQRKLRYADDKPWTTASPEGF YYTLYPLYDWKARDIWIYNARTRAIYNPLYDLMYRAGVPLRNMRVCEPFGPEQRKGLWLY HVLEPETWARMCERVSGAASGALYANESGAYFALRKRITKPPHHTWRSYAMFLLDVMPER TAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGSRDIPSWRRICKTLIKNDFWCRTLSF SPNKPRHYERYLQRMKERRKEWGIL >gi|296918677|gb|GG773023.1| GENE 4 3443 - 4087 404 214 aa, chain + ## HITS:1 COG:ECs1387 KEGG:ns NR:ns ## COG: ECs1387 COG1475 # Protein_GI_number: 15830641 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 214 1 212 212 381 89.0 1e-106 MGDSVTPEVEVLSNMIRQYFSQERSEEETIRALNHLRRVLHEVSPFAQEPVDCVLWVKAD EVVANDYNPNVMSSSEKKLLKHSLEQDGFTQPVVVSEEKEHYLVVDGFHRQLLGRKADTR KRLKGWLPVTCINPERKGQASRIAATIRHNRARGKHQITSMSDIVRDLSRLGWTDERIGT ELGMDQDEVLRLKQISGLTELFQEENFSPSWTVR >gi|296918677|gb|GG773023.1| GENE 5 4458 - 6605 875 715 aa, chain - ## HITS:1 COG:ECs2792 KEGG:ns NR:ns ## COG: ECs2792 COG1629 # Protein_GI_number: 15832046 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 1 715 1 715 715 1354 99.0 0 MLYNIPCRIYILSTLSLCISGIVSTATATSSETKISNEETLVVTTNRSASNLWESPATIQ VIDQQTLQNSTNASIADNLQDIPGVEITDNSLAGRKQIRIRGEASSRVLILIDGQEVTYQ RAGDNYGVGLLIDESALERVEVVKGPYSVLYGSQAIGGIVNFITKKGGDKLASGVVKAVY NSATAGWEESIAVQGSIGGFDYRINGSYSDQGNRDTPDGRLPNTNYRNNSQGVWLGYNSG NHRFGLSLDRYRLATQTYYEDPDGSYEAFSVKIPKLEREKVGVFYDTDVDGDYLKKIHFD AYEQTIQRQFANEVKTTQPVPSPMIQALTVHNKTDTHDKQYTQAVTLQSHFSLPANNELV TGAQYKQDRVSQRSGGMTSSKSLTGFINKETRTRSYYESEQSTVSLFAQNDWRFADHWTW TMGVRQYWLSSKLTRGDGVSYTAGIISDTSLARESASDHEMVTSTSLRYSGFDNLELRAA FAQGYVFPTLSQLFMQTSAGGSVTYGNPDLKAEHSNNFELGARYNGNQWLIDSAVYYSEA KDYIASLICDGSIVCNGNTNSSRSSYYYYDNIDRAKTWGLEISAEYNGWVFSPYISGNLI RRQYETSTLKTTNTGEPAINGRIGLKHTLVMGQANIISDVFIRAASSAKDDSNGTETNVP GWATLNFAVNTEFGNEDQYRINLALNNLTDKRYRTAHETIPAAGFNAAIGFVWNF >gi|296918677|gb|GG773023.1| GENE 6 7678 - 7842 83 54 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_1129 NR:ns ## KEGG: EcSMS35_1129 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 54 1 54 54 82 100.0 4e-15 MPLITHLLNVEELSRLLKNVALSVINLFILDDVSEKMEYIPDWVVVTRLNIWWR >gi|296918677|gb|GG773023.1| GENE 7 8310 - 8852 432 180 aa, chain + ## HITS:1 COG:ECs2788 KEGG:ns NR:ns ## COG: ECs2788 COG2087 # Protein_GI_number: 15832042 # Func_class: H Coenzyme transport and metabolism # Function: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase # Organism: Escherichia coli O157:H7 # 1 180 2 181 181 352 98.0 2e-97 MILVTGGARSGKSRHAEVLIGDSSQVLYIATSQILDDEMAARIEHHRQSRPEHWRTVERW QHLDELIHADINPNEAVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINAEIQSLIA ACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLVVSGIGVKIK >gi|296918677|gb|GG773023.1| GENE 8 8849 - 9592 840 247 aa, chain + ## HITS:1 COG:ECs2787 KEGG:ns NR:ns ## COG: ECs2787 COG0368 # Protein_GI_number: 15832041 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 414 98.0 1e-115 MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLLGAISGLVFMVLQAWCG VPLAALFSVLVLALMTGGFHLDGLADTCDGVFSARSRDRMLEIMRDSRLGTHGGLALIFV VLAKILVLSELALRGEPILASLAAACAVSRGTAALLMYRHRYAREEGLGNVFIGKIDGRQ TCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQLLKRTLGGQTGDTLGAAIEFGEL VFLLALL >gi|296918677|gb|GG773023.1| GENE 9 9604 - 10683 656 359 aa, chain + ## HITS:1 COG:cobT KEGG:ns NR:ns ## COG: cobT COG2038 # Protein_GI_number: 16129932 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 359 1 359 359 630 97.0 0 MQILADLLNTIPAINSAAMSRAQRHVDGLLKPVGSLGKLEALAIQLAGMPGLNGIPHVGK KAVLVMCADHGVWEEGVAISPKEVTAIQAENMTRGTTGVCVLAAQAGANVHVIDVGIDTA EPIPGLINMRVARGSGNIASAPAMSRRQAEKLLLDVICYTRELAKNGVTLFGVGELGMAN TTPAAAIVSTITGRDPEEVVGIGANLPTDKLANKIDVVRRAITLNQPNPQDGVDVLAKVG GFDLVGIAGVMLGAASCGLPVLLDGFLSYAAALAACQMSPAIKPYLIPSHLSAEKGARIA LSHLGLEPYLNMDMRLGEGSGAALAMSIIEAACAIYNNMGELAASNIVLPGNTTSDLNS >gi|296918677|gb|GG773023.1| GENE 10 10748 - 11680 630 310 aa, chain + ## HITS:1 COG:ECs2785 KEGG:ns NR:ns ## COG: ECs2785 COG1376 # Protein_GI_number: 15832039 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 592 98.0 1e-169 MRRVNILCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQG LSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVF PIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLY AIYIGKLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE PDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQHRSGMPV QISSGSRQMF >gi|296918677|gb|GG773023.1| GENE 11 11999 - 12397 108 132 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C2227 NR:ns ## KEGG: UTI89_C2227 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 132 10 141 141 258 100.0 4e-68 MLINEELVDKIDTKNYGDGSNNVFVIWTLSLKSSTKSECFKFLGFVHLQSVLVEISSSPE KYYKLRIHQERVMEGMMPEEPKAIVIEDTEWGCIHSQYHYQDKDPAIITCIVNVNNTDLI ATELVNSVLNTS >gi|296918677|gb|GG773023.1| GENE 12 12705 - 13184 256 159 aa, chain - ## HITS:1 COG:STM2764 KEGG:ns NR:ns ## COG: STM2764 COG2801 # Protein_GI_number: 16766076 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 1 82 74 155 155 154 92.0 5e-38 MHDALVCGRRFRMFNVVDDFNREALSIEIDLNLPAQRVVRVLDRIAANRGYPAMLRLDNG PEFISLALAEWAEKHAIKLEFIQPGKPTQNAFIERFNRTYRTEILDFYLFRTLNEVREIT EKWLSKYNCERPHESLNNMTPEEYRQRHYLAGISKSVWN >gi|296918677|gb|GG773023.1| GENE 13 13289 - 13555 348 88 aa, chain - ## HITS:1 COG:STM2765 KEGG:ns NR:ns ## COG: STM2765 COG2801 # Protein_GI_number: 16766077 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 1 88 1 88 88 145 96.0 2e-35 MRKARFTEHQIIAVIKSVEAGRTVKDVCREAGISEATYYNWKSKYGGMEASDIKKIKDLE DENRRLKQMFADLSLENRALKDVIEKKL >gi|296918677|gb|GG773023.1| GENE 14 13701 - 14435 174 244 aa, chain - ## HITS:1 COG:slr0495 KEGG:ns NR:ns ## COG: slr0495 COG2091 # Protein_GI_number: 16331528 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Synechocystis # 25 175 24 171 246 84 34.0 1e-16 MRIDILIGHTSFFHQTSRDNFLHYLNEEEIKRYDQFHFVSDKELYILSRILLKTALKRYQ PDVSLQSWQFSTCKYGKPFIVFPQLAKKIFFNLSHTIDTVAVAISSHCELGVDIEQIRDL DNSYLNISQHFFTPQEATNIVSLPRYEGQLLFWKMWTLKEAYIKYRGKGLSLGLDCIEFH LTNKKLTSKYRGSPVYFSQWKICNSFLALASPLITPKITIELFPMQSQLYHHDYQLIHSS NGQN >gi|296918677|gb|GG773023.1| GENE 15 15571 - 24684 4769 3037 aa, chain + ## HITS:1 COG:all2635 KEGG:ns NR:ns ## COG: all2635 COG3321 # Protein_GI_number: 17230127 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Polyketide synthase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 918 2195 39 1385 1565 741 35.0 0 MDGWSLSLFIKQLLQLYGAAVVSGVRDDSAIIPSSLKPLVDTLSARRHTFQHDYWAAYLR EGTPTCIVPLSQYHTDTEAENNSYVNQTNHVEINLSPDVCQKIQTLCSDYRITPAVIFYV AWGILLQRWCYADDVLFGATISGRNIPIDGIEETLGLFINTLPLRLRDDGATLLQHLQRM HQTLIAHYSNEHDALASIQRLVHKEGHAGDLFNTLVVLENYPVDMTLLSCASPVAIRHLS VHEQTHYPLTLTITQQKGFRFSIAYALNYLTNNMAQALLMHLSYLLEQLVDNPQRPIAAL VNLSPCQQAQVLQPYLERMACRDWDSQSNVIEQFHQVAATSPAQVAVVDELCALTYSELA AQAEQLAAYLVQQGVMVGDTVGIISERRVNTVVAIIAIMLIGAAYVPISPDYPVGRMQEI IDDSGLALLLVHGKPLDALNVAQSDLCAFPVAPSVVFPVITPDSRAYVIYSSGSTGKPKG IAVAHRGLLRLIQGDSPLKVESGETTLLTCPFEFDVSVFEMWSTLLNHGKLVLLSKQALL DINHIRRTIADEQVARAWFTSSLFNSYVAEGADFFGMLQHITVGGEAVSAWHVNDVMQKY PHLVVTNGYGPTENTIFTTAYRFNGLQPARVPIGYAVPGTSLYITDLHGHLLPIGATGEL VAGGVGVAIGYQNNPALSATVFVPDPFIPGGMMYKTGDYARLLDDGCVDCFGRKDGQIKI NGQRIETGEIEQRLLECSGIIEAVVVPYRVRETLHIAAVVCVNDSYDEVEVRGQLADRLP PFAIPESLVVVTEIAKSHSGKADLAQLRYLLPATQCNAVSTTISEVHSDMEHALHAIWQR VLDRQDIDSNASFFALGGTSLDTIRVKGDIKRQLGLEIDITDLFKYPTLTALAHFLDTAV SPEDAIPTRAVVYSDMPVAIVGMAGRFPGAANIAALWTLVVGGESGLTLFSDEELRAHGV TPDTLKQANYIKTKGIVDDHEWFDADFFGYTPNEAECMDPQIRLLHQCCWQTLEHAGCDP ATFTGAIGIYAGLLTSPHWLNAVMQDTTDSTALYKASILNIHSVTALIAHALNLTGPAVT LDTACSTSAVAIHQACIALRNRDCDAALAGGVSIEMPAYRGYEYHEGMINARDGVCRPFD SQASGTVTGDGLGMLLLKRLDDALADRDCIYGVIKGSAVNNDGNNKIGYTAPSVIGQSTV IRTSLRRAGFDSDSIGLVEAHGTGTVLGDPIELRALNEVFGPTPVPFCVVSALKSNIGHL NSAAGVAGVIKTTLALHHQVLPPTAHFRQLNPAIDLSRSALYVNQQVQPWPSTRPRRALV SSFGIGGTNASIALEAHQHEDDPSATGVRDSYLLLFSAKTPAALELRVASTLEYVKHGVG VRLPDVAYTLQTGRTAFDHRRAYLVSRGSKIDLSCATILQAEIFNGQRTTAEICFMFPGQ GSQYHGMASALYAHQPMFRQHMDRCFAAFQRYSTVDLKALLFDDEDTRDIDQTQFTQPAL FCVEYSLARTLIDLGITPDSMIGHSLGEYVAACIAGVFTLEDALHVIEARGRLMQSMRPG SMMAVYLSREQLTPWLAAERGIELAANNSAHFCVVAGEQAAISRLSTRLVEGGIQHRRLK TSHAFHSAMMTPMLHDFAQLLGQIPMHAPHKRFISNVSGTWITEEQATSPDYWVQQVRNA VLFSEGAAQLLVQPTLFIECGPGNTLSTFIQGHNQYSDQPTLLTLRKANAAIDDEHMLHR TLAALWVRGENIDWRRFNQTALGKHIPLPDYPFEQTYYYRYGAALSGYRQYPNPLRRPQD EWLQRVLWRMHDTSLREAFYAPGELIIIISADGDKLQQTLMSSGVDSITMPLPISSEDDV WDNDRILTHFHDICALLAHKTYRQLHCLYAPGAEAGSSLTQSLSGLYRVARWCMHSTTPL ASLTVLTHGAFRVQEEDNPEPTLAALSGAVNVFAQELHPTEVRLIDIDAQSSDENLNLLT QRLAPKQETVMALRQGMLYLRRFIPTRLLAHLPPQTGCIPGNVLWIIGGEKGIGRMIGEA LAQREGVRVVLSSRTGYHHEAVQQDALDVIHCDVTQAEAVRACLATLLERYGRLDGVIFA ADATTTLTLHQLSESALRDTLTVKERGTANVLHALAQRNLLDERLLLLFCNSLAAVNAEI GQTGYATASAYLDALAQQLRTRYKVNALSIGLDALREQGMLLDAINGSEYDVLRGLRPLM TGTLLQAYKQQGADTSYYARLSPESDWLLDEHRISGIATLPGTGYLALAYEALRHYFVQD QICIDELVFLAPLTVMDNCSVDVFVDISPNGQGVSVEVKSMTERFSGTLTTHARGRATRL MVDDNVVCDLTGLMREMHTITPPTKELSSTHFHYGPRWHSVQQLYGNTAQTQVFATLALP TVAANDTIALHPALLDIASSVVEQLPGFHTDSVPFLYQDLRLYRPLPNTLHVALTVNRHD EEGDSYAFTLYDMAGEMVARCAAMVKRKVQLHIQDVDDDTRLRVPSADNYQLRLAAEGEG AGKLALCPTPRLALGDSQVEIEVLATGLNFKDVLFTTGLLRQQPGEAPLQLGLECAGRIT RVGKNVTEFAPGEDVMAVLNGGFVQYARVESDCVVRKPAHCRIEQAAALPIAYLTAYYAL VVRANLQPGERVLIHSAAGGVGLAALHIAKRCGAQIFATAGSEQKRDYLLSLGVHAVADS HDEQFAATLLTASDGQGMDVILNSLTGRLLDASLALLAPLGRFLELGSKDIVEDKALPMR FFAQGGTFIPINFHAAHGAFSRYLQQIVAWIDDNTLPLLPCKSVPLPEVARAFATLTTPQ HIGKVVVTHRTAAGMDRLNAMIAERRLGGYALSMSNAEVMRQLWPILNTRSPWAQLLLSP RAIDRLARGNRVDRGVPSAANDTITQQTVKKRPRPEIGVPYSPATREVERVLCQILEEYL GLDRVGIDDNYAELGATSLDMVQLSGQMARHYPQVSVVSLYNHATVRQLATFCQPPEGES NAPSPQPAVQTNTRANQIAKRALQIAKNTARSHTSLH >gi|296918677|gb|GG773023.1| GENE 16 24725 - 27325 1217 866 aa, chain + ## HITS:1 COG:all2635 KEGG:ns NR:ns ## COG: all2635 COG3321 # Protein_GI_number: 17230127 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Polyketide synthase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 11 497 38 530 1565 419 45.0 1e-116 MEYASEMNGMEIAIIGMAVRFPQSRTLHEFWHNIVQGKECVTFFSEEELLAEGVEQSTLD NPAYVRAKPYIEGICDFDAAFFGYSHKEAQTLDPKSRVLHEVAYHALEDAGYAQRTSDLI TGVFVGASEDVDWLRRSLSQIGGDALNRFESGIYGHKDLLAHLIAYSLNLNGPVYSLYTS CSTSLSATHIACRSLLFGECDLALAGGITIDLPQKSGYFCQQGMIHSTDGHCRPFDSQAS GTLFGDGAGVVVLRRLEDALAAGDRIYAVIRGSAVNNDGKQKIGFVAPGHEGQKAVICAA CHLAEVSPESIGYVETHGTGTRIGDPIEFAALTEAFDTSHRQYCALGAVKANIGHTHAAA GVAGLIKTALVLHHRTIPPLANYQMPNSKLDLAHSPFYIPIQPQEWPASRMPPRAGVSSF GIGGTNVHMILEGLNPAVRDDHDQVRAPVFIPLSAPSFEQLDELTQQLTPLLATLDASTL AYTQQVARPVFDCRRVIQVENDGTQAMLASLDNLMPDAPWGLHCPDLRTTNDCTYAQWLA HSAHYQREATALTALLDGMNIPPAYCHAETWAAQANSSLLIRGCQTIAALKTWMNLLPTL TLLSGAGTGLLPAAAASGMIATQDVLHLLWEMEQKALHLWLPERHEPIPGYVLAWQGNPI TDAQRNDRGFWSEALLADTRELGEGVHSINWVRLPPEIREDVDVLRYVAQLWCAGINVDW AVWYGTPLPQRGSASAYPFAHNHYPLPGRVMGSVETQPEAGPETHHPYQARPVLSVPFVA AHSRGMQYITGLMELLLEISPVGVDDDFFELGGHSLLVTQLTSRLERDFNVHIDLLTLME NPNPRNIYAHIAAQLGGEDNLEIACQ >gi|296918677|gb|GG773023.1| GENE 17 27338 - 28204 327 288 aa, chain + ## HITS:1 COG:DR1068 KEGG:ns NR:ns ## COG: DR1068 COG1250 # Protein_GI_number: 15806088 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Deinococcus radiodurans # 1 281 1 278 278 238 45.0 7e-63 MNVAVIGAGVMGTGVAHNMAQYGISTNVVDISQSQLDKCRQMIEANLRLYNFHPQHKKKT HSTAEIMENIRFTTELDDIVECDLVIENITEDIEKKNALYTRMNTICGASTVFGVNTSAI SITALSKLMRHPENVVGVHFMNPVPLMHTVELIRGVHTAERTLNIFHHLFAQLNKTGIVV NDSPGFVTNRAMMIFVNEAIFMVQEQIARAEDIDTLFKTCFGHKMGPLQTADLIGLDTIL QSLQVLYESFNDDKYRPSFLLKKMVDAGYLGVKSGQGFYRYQQTYAEQ >gi|296918677|gb|GG773023.1| GENE 18 28234 - 28482 162 82 aa, chain + ## HITS:1 COG:no KEGG:CKO_00863 NR:ns ## KEGG: CKO_00863 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 82 3 84 84 132 100.0 4e-30 MKKQDMKAAIREFLSRSLRGHTLNDDDDIFSLGLVHSLFTVQIILFIEKNFQVELEVSEL KTEQIATVNKIVELIQRQTGLE >gi|296918677|gb|GG773023.1| GENE 19 28486 - 29616 826 376 aa, chain + ## HITS:1 COG:AF2057 KEGG:ns NR:ns ## COG: AF2057 COG1960 # Protein_GI_number: 11499639 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Archaeoglobus fulgidus # 5 371 27 405 409 201 32.0 2e-51 MCTENYELAQQEAVLFAKQHLALAAQNIERQQFIVPDIISCVAQAGYLGASIPQKYGGRG YDSYQLCALHEVMAGVHGSLENLITVTGMVSTLLQRVGSAAQKAHYLPKLATGELIGAIA LTEPNIGSDLVNVETELQQDGDGWRLNGKKKWITLGQIADFFIVLIHCGNQLATVLIDRN TDGFTITPLNDMLGLRGNMLAELHFNDCRLKEDALLGPLTPGVPLAVNFALNEGRFTTAC GSLGLCRAAVDVAARYIRQRKQFKRRLFSHGIVQHLFATMLTQTRSAQLMCFSAAEYRET LHPAMINQILMAKYVASKAAVDVAGKAVQLLGANGCHADYAVERYYRDAKIMEIIEGTSQ IHEIQIAMNYMMGSEA >gi|296918677|gb|GG773023.1| GENE 20 29613 - 30881 685 422 aa, chain + ## HITS:1 COG:BS_fabD KEGG:ns NR:ns ## COG: BS_fabD COG0331 # Protein_GI_number: 16078653 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Bacillus subtilis # 5 294 4 285 317 143 32.0 5e-34 MTKDVALMFPGSGSQYVGMARWLYERYPQVRTLFDEASQITERDMAALCLSGTLVQLAEP TAMALAIYTTSVAHFVAWQQFLAQTGVHVNLRYMLGHSLGEYAALTCSGALSFSQALALV AMRSRLASEIAREMDASTTIIKQGNQALVAAACEVAERETRQQVGIACFNSPQQFMLSGQ NSAIIAAEQYLLDHDRQVEVVPLIGGVPYHSPLLKPCGQQLRKALDRCEWRRPCCPVISN VNAQPYPDTVTPVQWLEQQLSQPVQWQRSLTYLTGHLSPIAIEIGPQSVLKNLLLENRYP APVYAFDNRHDRAQLALVLGDNMAVKTDPEAVRRQRITLLTNALTATRHHRAADVAASAQ LKELLSRFFERIQQIEQRGTSSEEDIAFLHELLEQGFQLKGSSQAEIDACHARLASDNGG QA >gi|296918677|gb|GG773023.1| GENE 21 30929 - 35725 2228 1598 aa, chain + ## HITS:1 COG:all2644_1 KEGG:ns NR:ns ## COG: all2644_1 COG1020 # Protein_GI_number: 17230136 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 523 1560 16 1061 1075 513 33.0 1e-145 MEQQGIMRQLPTDDQTIVDYLYRIAGEYGEKAAVLMGDAALSYHDLNARSNQLAHYLRGL GIGEDRVVAIRLPRGMAMLIAIFAIVKAGGAYLPLAYNAPRSRIENILSNSGAVCLIGTD DGDRWPIPRVEIDSAAVSAMPTTDLRYRPHARQLAYIIYTSGSTGVPKGVATEHAALLNR IVWMQNAYPISSQDVLFQKTVYTFDVSVWEMFWWAMYGASVVLLPSGLESDPRTLARLIQ RHRVSVVHFVPSMLNLFVEYLEMKQDPRLTASLRLVFSSGEKLTVHSVARFYQSVAQGDL INLYGPTEAAIDVSHHRCLRGYDYDDIPIGQAIDGCRLYVLDDHGNPVADGEEGELYLAG IGLARGYLNNVALTDRCFTIHPTLRHLGKPERLYKTGDLVWRDGESQQIHYIGRNDFQIK IRGLRVELGEIEAHAMRFPGVQQAVVVADQDDPDNQLIYAFVVSSVPLNLAALMDALSKN LPAYMLPNRLLAMSELPLSDNGKCCRKTLLDLARAYSASRVDLRETPAVRYLPLSSAQSS MWFMQQLAPHTALYNNPTALLLEGELDRTRMDGAIRQLMSRHTLLRAMAETHNGQPVLAV PQCVSSQALLTIVPLPSVSDDNALQAMINQRAAHPMPLTSGTPLCRFELLTLDDDRSVLL IHLHHIISDGWSKGVLLRELQAAYNGESLTPEPLLEYADYMEYQEEWRQSDAYQDAMRYW QNTLAGTLPILDIPTDQPRQKVARYQGAFVAFALSANTCERVLAAARAQRVSLYNYLLTA FVLLLHRNARQQEYIVGMPIAARLTKEQEHMIAPLVNVLPLRLPLDEAASFSELVQTIRG ILFAAFRHQRLEFTDIVRAVNVDRSAGHFPIYQCMFQLDNMPLASPTLNGVNVTPLLLDT SASQVDISLSMQHIDGRITGTFEYDAGLYSADRIQHLVAQWRELLDEASSQPTQLVRDLI RFTPREHAWLARHNATEVALPPVDNLLALVLPHCQQRPTQVALRHADDAMTYGELQQATM QMCTWLRAQGVKRGESVALQLPFCFELIIAQLAILSLGASYVPLDGNAPAARNALILAQA TPCMLLVAQPLESPHGLTIPWVLVPDWRSLLTEIPNLPVSVAPDALDCDAVVIFTSGTTG QPKGVRLSQRNLVNLTASFISSYQVTHQDVLLPITSVASASFVGEVLPLLAAGGTLVLAQ KAQSLDSDALIALLASQRVTILSTTPSLSASLSVLAQSMGSLRLFLCGGEALEYEQIAPL LPHMAVVNGYGLTESGICSTYFPVAKRREQETGALPIGRPIQNTQAYVVDAYNRLVPPGA CGELCFSGLGISPGYLDARQDPERFVELPEYPGVRVLKTGDRARWATDGMLFYLGRQDRQ VQIRGYRVELGDIESLLKQHPDIADAWVDVRRNAAATPLLVAFYCSVNGVALDAQQLRVW LSLRLPLHMLPLLYVPLSAMPLGVNGKIDPQCLPLVDLRQLEGPGEYVPPATELEQRLAE IWQQLLGLERVGTTTNFFDLGGHSLLLVQMQQYIGQQCGQHVALVDLLRFTTIKRLAEFL LAPDAAQGTTGDQTQLRAAKQRLAFGHTRWAATTDSHH >gi|296918677|gb|GG773023.1| GENE 22 35775 - 38807 1926 1010 aa, chain + ## HITS:1 COG:all2646 KEGG:ns NR:ns ## COG: all2646 COG3321 # Protein_GI_number: 17230138 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Polyketide synthase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 8 889 9 892 1488 777 45.0 0 MAENDFGIAIIGMAGRFPQADTVQAFWENLLASRECISFYSDEELLAMGISPEFVQHPDY VKAKGEVADIDKFDAAFFGIAPREAELMDPQHRVLLETAWAAFEDAGYVAADYPGDVGIF AGKSMDSYLMLNLMPHFKRVFSSGSLQAAIGNDKDSITTTIAYHLNLRGPAITVQTSSST SLVAVCVACQSLLTWQCDMAIAGGVTLGPPAKTGYLSQEGGITAADGHCRAFSDNSSGFV PGTGAGLVVLKRVDEALRDGDNIYAVIKGFAVNNDGSEKISYTAPSVDAQARAIAQAQRL AGLTPQDITYVEAHGTGTRLGDPVEFSALSQAFAGASQKQYCALGSVKTNIGHLDTAAGV AGLIKTALAVQQGIIPATLHFERPNAQIDLTNSPFYINTTCQPWQPESGIRRAGVTSLGM GGTNAHVVLEQAPAVDLQARAPVPAYSILPFSAKTDSALSSGLARFADFLQHESLPDRRD LAWTLSQGRKAFAHRAALVTRDLHAAGTLLQQAATAPFARGVAQTQLGLGLLFSGQGSQY QRMGHQLYQVWPAYADAFDRCATLLEREYQLDIRHELFRAEVSLAQGERLAQTCLTQPLL FSVEYALAQLWLSWGITPTVMIGHSLGEWVAATLAGVFSLEDALRLVARRAELMHQAPSG AMLMVALPEAQIRALITAPLAIAAVNAPDYSVIAGPTSEILAVSQRLTEQNIINKRLHTS HAFHSSMMQDAAQALRQAFENVRLNPPTLTIISTVTGAHVSADTLTTPDYWIEQMLMPVQ FSAALQEAQATFDVDFLEIGPGATLTQLTNGHALGDRLAFSSLPAGARSSDEHKHILDTV AALWVRGHNIDLSAFAGEQPRRVSLPTYAFDKIRYWVDSPEEQRSAVTPVADAGSVIPSE PSVRRQPRPAFSVPYAAPESKTQRGLVAICEALLGIDGLGIDDNFFEAGGHSLMLGMLLA QVQERFAVTLSFFDVMEDASVRALAQLVEQEQQDDGGSALAVLVNDMINE >gi|296918677|gb|GG773023.1| GENE 23 38851 - 43248 2198 1465 aa, chain + ## HITS:1 COG:all2644_1 KEGG:ns NR:ns ## COG: all2644_1 COG1020 # Protein_GI_number: 17230136 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 14 1073 6 1064 1075 583 33.0 1e-166 MTIHHAALARMLPAEKKEKLLRQLAQSGVSPSRIPIIKADPAQAIPLSFNQERLWFLQKY DSTATNYNLYVVYRLHGVVDMPMLTEALRHVQARHAILRTRIIVRNDRPCQVIDDASSLV LDTVTLAAQAPTSALDAVIQQVINTRFDLARGPLWGVTQIIQPDQGCHLVFCAHHIIIDG ISLRLLFDELQQQYARLHAGNETSLPPPPLQYADYAFWQREWFQDTLLANELAYWRARLQ DAPLLSTFPSLHPRPAQPSTHGSRFSITLDETLSLALKHVARTQETTPFVLMLTAFQLVL MRYAQQQRLVIGMPVSGRIRPELQSSIGYYASTAVIYTDFNGVEVGREALQRVKASVKET QGRQQLPFENLVNMLDLPRSLSHSPLFQILYIYHNHVTPRAFTLAGAYWEQVTYHNQTVK YDMTVEVFQNDATFDVSFEYDLGLYDADVVKQIAEALRQHCLSLTSSLETPIGAIPLHAP ETATPRRDPLNATNVPWLGPQDVLRIIEQRCVQHPKQLAIQQHDGTLTYAELWARVQFIA MRFRAHGIQPGDRIGVLLPRHRDVIATMLATWFVGACYVPFDIHQPAARLQRLMQRARLV CLVVRQPGEWGEIVQLSLPELMQDMSNAIRYSTPCALLPDMQAYLLFTSGSTGEPKGVCV VHRGLLNLLLDMQRTFAVGSQDRLLSVTTPTFDISFLEYLLPLISGASLYLTEAERAADS FRMIPLIADYRPTLMQATPSFWHGLLMAGWRGDPELCVLAGGEALPTKVAEELLRCCGSL WNLYGPTETTIWSLKSQITQAENITLGAPIANTRIYILDNEGHPVPQGVDGELYIAGDGV AQGYDGQPELNAQFFLSEPGVPGGRMFRTGDLVRSDAQGQLFFVGRKDSQIKLRGYRIEL GEIERTLARHPHVDAAVVACIERAPLHKALAAFIITSEPPSLFEQLKNELRQQLPDYMVP TLWQRVADFPNTDNGKIDRKRLAENFVADSSLVSPQTQALSDTEQMLLALWMRYLPIKNV DPECDFFRLGGHSLLAVTLVAEINRTFHCALTLKDIFHYSTLRALSARIAQQSITDAAAS QDDWVIVHDPEHRHQPFPLTDVQRAYWLGRQTGATSIATHIYHEFDVEHFNVTRFTHAVN ALIARHEMLRARVLPDGTQQILAQVPAYQLEQRDLSALSPNARNDALMAIRDRLSHHVHP ADRWPLFDFSYSACTAQHGRLHFSLDLLIADALSMRTLQQELMMLYREPHVSLPLLPFSF RDYVQALLVEQASEAYARDQAYWQRALPQLYGPPTLPVQGDLAQLSAIRFVRRRHRLSAH NWGVLSALAQRTRITKTALLLTVFSQVLARWSLSPTFTLNLTLFNRPQGYPNAEAVIGDF TAVSLLNVCYDSQHSYAHNAQRIQVQLWEDLEHRRFSGIRASEALIHSGRFHAPMPVVFT SMLDIDGETTAQDPRDTTRLLCVPS >gi|296918677|gb|GG773023.1| GENE 24 43308 - 43485 84 59 aa, chain + ## HITS:1 COG:no KEGG:ECP_1971 NR:ns ## KEGG: ECP_1971 # Name: not_defined # Def: phosphopantetheine attachment site; region: PP-binding; cl09936 # Organism: E.coli_536 # Pathway: not_defined # 1 59 1483 1541 2166 125 98.0 7e-28 MAGELHFNWDAVEQLFDTTLLDQMFGAYCHALQALVAMPQSWWGVNSSLALPTVSAPVT Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:19:44 2011 Seq name: gi|296918676|gb|GG773024.1| Escherichia coli MS 110-3 genomic scaffold Scfld339, whole genome shotgun sequence Length of sequence - 766 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 42 - 765 279 ## COG5525 Bacteriophage tail assembly protein Predicted protein(s) >gi|296918676|gb|GG773024.1| GENE 1 42 - 765 279 241 aa, chain + ## HITS:1 COG:STM2608 KEGG:ns NR:ns ## COG: STM2608 COG5525 # Protein_GI_number: 16765929 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Salmonella typhimurium LT2 # 1 241 61 301 643 491 92.0 1e-139 MNCMGNDLIRTVNLIKSARVGYTKMLLGVEAYFIEHKSRNSLLFQPTDSAAEDFMKSHVE PTIRDVPALLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDEL SSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKIKGSCQIEKAANESAHFMRFYVPC PHCGEEQYLKFGDDASPFGLKWEKNKPESVFYLCEHHGCVIHQSELDQSNGRWICENTGM W Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:19:44 2011 Seq name: gi|296918675|gb|GG773025.1| Escherichia coli MS 110-3 genomic scaffold Scfld362, whole genome shotgun sequence Length of sequence - 618 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 24 - 618 162 ## COG3765 Chain length determinant protein Predicted protein(s) >gi|296918675|gb|GG773025.1| GENE 1 24 - 618 162 198 aa, chain + ## HITS:1 COG:fepE KEGG:ns NR:ns ## COG: fepE COG3765 # Protein_GI_number: 16128570 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli K12 # 6 197 24 215 377 251 64.0 5e-67 MLPNGNEEIDLFDLIRVLWAAKIKIVGVILFFACIGFLVSFVLPQKWTSSAVVTPAESVQ WSELNKELSKLHVLGVDFDINRDSAFALFIKKFQSVNSLNEYMRSSPYVMEIIKKKNISA LELHRAIVGLSENMKSVDDNASKKNDKSSLYVSWTLSFTAPTSKEAHDVLSGYINYVSSL VVRDLMEDIRNELEVKTN Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:19:59 2011 Seq name: gi|296918674|gb|GG773026.1| Escherichia coli MS 110-3 genomic scaffold Scfld366, whole genome shotgun sequence Length of sequence - 55558 bp Number of predicted genes - 54, with homology - 53 Number of transcription units - 31, operones - 11 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 141 - 178 4.1 1 1 Tu 1 . - CDS 192 - 965 989 ## COG2186 Transcriptional regulators - Prom 1063 - 1122 5.1 + Prom 850 - 909 2.6 2 2 Tu 1 . + CDS 964 - 1158 79 ## ECBD_3711 hypothetical protein - Term 1112 - 1155 8.6 3 3 Op 1 7/0.000 - CDS 1180 - 2640 1907 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Term 2678 - 2714 8.6 4 3 Op 2 . - CDS 2721 - 3905 1431 ## COG1312 D-mannonate dehydratase - Prom 4023 - 4082 3.3 + Prom 4020 - 4079 2.6 5 4 Tu 1 . + CDS 4245 - 5588 1584 ## COG2610 H+/gluconate symporter and related permeases - Term 5584 - 5621 7.4 6 5 Op 1 . - CDS 5769 - 6671 544 ## EcSMS35_4847 protein FimH 7 5 Op 2 4/0.000 - CDS 6691 - 7194 234 ## COG3539 P pilus assembly protein, pilin FimA 8 5 Op 3 6/0.000 - CDS 7207 - 7737 144 ## COG3539 P pilus assembly protein, pilin FimA 9 5 Op 4 10/0.000 - CDS 7747 - 10203 1293 ## COG3188 P pilus assembly protein, porin PapC - Prom 10399 - 10458 4.3 - Term 10332 - 10364 -0.4 10 5 Op 5 7/0.000 - CDS 10473 - 11198 493 ## COG3121 P pilus assembly protein, chaperone PapD 11 5 Op 6 4/0.000 - CDS 11235 - 11774 286 ## COG3539 P pilus assembly protein, pilin FimA 12 5 Op 7 3/0.333 - CDS 11839 - 12387 502 ## COG3539 P pilus assembly protein, pilin FimA 13 6 Op 1 12/0.000 - CDS 12867 - 13463 374 ## COG0582 Integrase - Prom 13589 - 13648 7.9 14 6 Op 2 . - CDS 13941 - 14543 80 ## COG0582 Integrase - Prom 14772 - 14831 6.3 + Prom 14804 - 14863 5.8 15 7 Tu 1 . + CDS 14954 - 15199 132 ## ECIAI1_4527 hypothetical protein + Term 15302 - 15341 -1.0 + Prom 15827 - 15886 5.3 16 8 Op 1 . + CDS 15997 - 16713 456 ## G2583_5112 hypothetical protein 17 8 Op 2 2/0.333 + CDS 16733 - 17839 664 ## COG3055 Uncharacterized protein conserved in bacteria + Term 17844 - 17884 0.3 18 9 Tu 1 . + CDS 18497 - 18883 110 ## COG2801 Transposase and inactivated derivatives + Term 19069 - 19104 -0.7 - Term 19368 - 19408 -0.4 19 10 Tu 1 . - CDS 19466 - 20602 337 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits - Prom 20748 - 20807 2.3 + Prom 20737 - 20796 3.5 20 11 Tu 1 . + CDS 20824 - 21069 173 ## ECUMN_4909 hypothetical protein + Prom 21181 - 21240 5.1 21 12 Op 1 1/0.333 + CDS 21446 - 21703 244 ## COG3811 Uncharacterized protein conserved in bacteria 22 12 Op 2 3/0.333 + CDS 21715 - 22266 395 ## COG3153 Predicted acetyltransferase 23 12 Op 3 . + CDS 22318 - 23064 529 ## COG0500 SAM-dependent methyltransferases + Term 23068 - 23120 13.4 + Prom 23090 - 23149 3.7 24 13 Tu 1 . + CDS 23192 - 23452 288 ## ECSE_0267 hypothetical protein + Prom 23732 - 23791 5.1 25 14 Op 1 1/0.333 + CDS 23851 - 24972 840 ## COG1363 Cellulase M and related proteins 26 14 Op 2 10/0.000 + CDS 24969 - 25247 227 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 27 14 Op 3 2/0.333 + CDS 25259 - 26572 1248 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 28 14 Op 4 2/0.333 + CDS 26585 - 27391 825 ## COG0434 Predicted TIM-barrel enzyme 29 15 Op 1 2/0.333 + CDS 27522 - 27953 278 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 30 15 Op 2 2/0.333 + CDS 27965 - 28597 418 ## COG0036 Pentose-5-phosphate-3-epimerase 31 15 Op 3 1/0.333 + CDS 28614 - 29396 540 ## COG1349 Transcriptional regulators of sugar metabolism + Prom 29528 - 29587 4.3 32 16 Op 1 . + CDS 29699 - 30487 494 ## COG1414 Transcriptional regulator 33 16 Op 2 2/0.333 + CDS 30438 - 31397 788 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 34 16 Op 3 2/0.333 + CDS 31408 - 33375 1484 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Prom 33377 - 33436 4.0 35 17 Tu 1 . + CDS 33482 - 34831 947 ## COG2610 H+/gluconate symporter and related permeases + Term 34833 - 34870 -0.8 + Prom 35042 - 35101 3.7 36 18 Tu 1 . + CDS 35178 - 36164 544 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain + Term 36177 - 36214 6.2 - Term 36165 - 36200 5.0 37 19 Tu 1 . - CDS 36205 - 37209 753 ## ECUMN_4892 putative integral membrane protein - Prom 37247 - 37306 3.0 - Term 37248 - 37281 5.1 38 20 Tu 1 . - CDS 37313 - 37795 299 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 39 21 Op 1 4/0.000 - CDS 37985 - 39100 778 ## COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 40 21 Op 2 . - CDS 39110 - 40369 962 ## COG4857 Predicted kinase - Prom 40471 - 40530 5.1 + Prom 42413 - 42472 6.0 41 22 Op 1 5/0.000 + CDS 42527 - 44602 942 ## COG1401 GTPase subunit of restriction endonuclease 42 22 Op 2 . + CDS 44595 - 45881 365 ## COG4268 McrBC 5-methylcytosine restriction system component + Prom 46850 - 46909 4.9 43 23 Tu 1 . + CDS 47011 - 47730 130 ## Rxyl_2230 hypothetical protein + Term 47737 - 47769 4.0 - Term 48465 - 48503 -0.3 44 24 Tu 1 . - CDS 48534 - 48776 111 ## 45 25 Tu 1 . - CDS 48926 - 50548 125 ## Rxyl_2233 hypothetical protein - Prom 50671 - 50730 7.0 46 26 Tu 1 . - CDS 50954 - 51352 163 ## COG2801 Transposase and inactivated derivatives - Term 51731 - 51766 -0.7 47 27 Tu 1 . - CDS 51979 - 52491 311 ## VV0548 hypothetical protein - Prom 52517 - 52576 1.6 48 28 Tu 1 . - CDS 52724 - 53149 220 ## SPAB_01194 hypothetical protein - Prom 53298 - 53357 3.7 - Term 53340 - 53380 -0.9 49 29 Tu 1 . - CDS 53513 - 53668 94 ## c5146 hypothetical protein - Term 53686 - 53719 2.1 50 30 Op 1 . - CDS 53771 - 53947 153 ## EC55989_4897 hypothetical protein 51 30 Op 2 . - CDS 53964 - 54452 265 ## EcE24377A_4901 hypothetical protein 52 30 Op 3 . - CDS 54449 - 54826 231 ## EcE24377A_3413 hypothetical protein 53 30 Op 4 . - CDS 54915 - 55163 143 ## ROD_49671 hypothetical protein - Prom 55309 - 55368 2.0 54 31 Tu 1 . - CDS 55446 - 55556 96 ## c4574 hypothetical protein Predicted protein(s) >gi|296918674|gb|GG773026.1| GENE 1 192 - 965 989 257 aa, chain - ## HITS:1 COG:ECs5283 KEGG:ns NR:ns ## COG: ECs5283 COG2186 # Protein_GI_number: 15834537 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 257 1 257 257 496 99.0 1e-140 MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIK GLVEVRRGAGIYVLDSSGSQNTDGPDANVCNDAGPFELLQARQLLESNIAEFAALQATRE DIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATHNSMLVELFRQSWQWRENNPM WIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKLAMWQHLENVKQRLLEFSNVDDI YFDGYLFDSWPLDKVDA >gi|296918674|gb|GG773026.1| GENE 2 964 - 1158 79 64 aa, chain + ## HITS:1 COG:no KEGG:ECBD_3711 NR:ns ## KEGG: ECBD_3711 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 64 1 64 64 122 100.0 4e-27 MVLCPLGAVNQIFAGCGVNALSGLQRAILRPPLISNYTISTGSWHVQVGKKTKTGQPNIS LIDQ >gi|296918674|gb|GG773026.1| GENE 3 1180 - 2640 1907 486 aa, chain - ## HITS:1 COG:uxuB KEGG:ns NR:ns ## COG: uxuB COG0246 # Protein_GI_number: 16132144 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli K12 # 1 486 1 486 486 1013 99.0 0 MTTIVDSNLPVARPSWDHSRLESRIVHLGCGAFHRAHQALYTHHLLESTDSDWGICEVNL MPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALHPEIDGCEGILNAMARPQT AIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKSAIGYIVEALRLRREKGLKAF TVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENVTFPCTMVDRIVPAATPETLQEI ADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKVGAQFVADVVPFEMMKLRMLNGSHS FLAYLGYLGGYETIADTMTNPAYRKAAFALMMQEQAPTLSMPEGTDLNAYATLLIERFSN PSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQNGGSWRHLALGVAGWMRYTQGVDEQGNAI DVVDPMLAEFQKINAQYQGADRVKALLGLSGIFADDLPQNADFVGAVTAAYQQLCERGAR ECVAAL >gi|296918674|gb|GG773026.1| GENE 4 2721 - 3905 1431 394 aa, chain - ## HITS:1 COG:uxuA KEGG:ns NR:ns ## COG: uxuA COG1312 # Protein_GI_number: 16132143 # Func_class: G Carbohydrate transport and metabolism # Function: D-mannonate dehydratase # Organism: Escherichia coli K12 # 1 394 1 394 394 812 99.0 0 MEQTWRWYGPNDPVSLADVRQAGATGVVTALHHIPNGEVWSVEEILKRKAIVEDAGLVWS VVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCYNFMPVLDWTRTDLEYVLP DGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAVRFATMSDEDKARLTRNIIAG LPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKAIIPVAEEVGVRMAVHPDDPPRP ILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYGVRADNDLVDMIKQFGPRIYFTHLR STMREDNPKTFHEAAHLNGDVDMYEVVKAIVEEEHRRKAEGKEDLIPMRPDHGHQMLDDL KKKTNPGYSAIGRLKGLAEVRGVELAIQRAFFSR >gi|296918674|gb|GG773026.1| GENE 5 4245 - 5588 1584 447 aa, chain + ## HITS:1 COG:ECs5280 KEGG:ns NR:ns ## COG: ECs5280 COG2610 # Protein_GI_number: 15834534 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 704 100.0 0 MHVLNILWVVFGIGLMLVLNLKFKINSMVALLVAALSVGMLAGMDLMSLLHTMKAGFGNT LGELAIIVVFGAVIGKLMVDSGAAHQIAHTLLARLGLRYVQLSVIIIGLIFGLAMFYEVA FIMLAPLVIVIAAEAKIPFLKLAIPAVAAATTAHSLFPPQPGPVALVNAYGADMGMVYIY GVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVDMNNLPSFGVSILVPLIPAIIMI STTIANIWLVKDTPAWEVVNFIGSSPIAMFIAMVVAFVLFGTARGHDMQWVMNAFESAVK SIAMVILIIGAGGVLKQTIIDTGIGDTIGMLMSHGNISPYIMAWLITVLIRLATGQGVVS AMTAAGIISAAILDPATGQLVGVNPALLVLATAAGSNTLTHINDASFWLFKGYFDLSVKD TLKTWGLLELVNSVVGLIIVLIISMVA >gi|296918674|gb|GG773026.1| GENE 6 5769 - 6671 544 300 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_4847 NR:ns ## KEGG: EcSMS35_4847 # Name: fimH # Def: protein FimH # Organism: E.coli_SECEC # Pathway: not_defined # 1 300 1 300 300 527 99.0 1e-148 MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVNLAPAVNVGQNLVVDLS TQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRT DKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTG GCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQ GVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVKSIIGVTFVYQ >gi|296918674|gb|GG773026.1| GENE 7 6691 - 7194 234 167 aa, chain - ## HITS:1 COG:ECs5278 KEGG:ns NR:ns ## COG: ECs5278 COG3539 # Protein_GI_number: 15834532 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 253 100.0 1e-67 MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMS AGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLN TGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS >gi|296918674|gb|GG773026.1| GENE 8 7207 - 7737 144 176 aa, chain - ## HITS:1 COG:ECs5277 KEGG:ns NR:ns ## COG: ECs5277 COG3539 # Protein_GI_number: 15834531 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 319 99.0 2e-87 MRNKPFYLLCAFLWLAVSHALAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFN NIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNE QQNQIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ >gi|296918674|gb|GG773026.1| GENE 9 7747 - 10203 1293 818 aa, chain - ## HITS:1 COG:ECs5276 KEGG:ns NR:ns ## COG: ECs5276 COG3188 # Protein_GI_number: 15834530 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 818 61 878 878 1593 98.0 0 MADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLN TASISGMNLLADDACVPLTDMIHDATAHLDVGQQRLNLTIPQAFMSNRARGYIPPELWDP GINAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSK NKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPV IHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTV PYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRY RAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYR YSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRT STLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNI PFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGIYGTLLEDNDLSYSVQTGYAGGGD GNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLAHANGVTLGQPLNDTVVL VKAPGAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVP TRGAIVRAEFKARVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLA GKVQVKWGEEENAHCVANYQLPPESQQQLLTQLSAECR >gi|296918674|gb|GG773026.1| GENE 10 10473 - 11198 493 241 aa, chain - ## HITS:1 COG:ECs5275 KEGG:ns NR:ns ## COG: ECs5275 COG3121 # Protein_GI_number: 15834529 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 # 1 241 1 241 241 456 99.0 1e-128 MSNKNVNVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATRVIYPAGQKQVQLAVTN NDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFW MNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLIN PTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVM E >gi|296918674|gb|GG773026.1| GENE 11 11235 - 11774 286 179 aa, chain - ## HITS:1 COG:fimI KEGG:ns NR:ns ## COG: fimI COG3539 # Protein_GI_number: 16132136 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 179 37 215 215 370 100.0 1e-102 MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQIS SNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIG VALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ >gi|296918674|gb|GG773026.1| GENE 12 11839 - 12387 502 182 aa, chain - ## HITS:1 COG:ECs5273 KEGG:ns NR:ns ## COG: ECs5273 COG3539 # Protein_GI_number: 15834527 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 214 91.0 1e-55 MKIKTLAIVVLSALSLSSAAALADTTTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQV RTASLKQAGATSSAVGFNIQLNDCDTTVATKAAVAFLGTAIDATHTDVLALQSSAAGSAT NVGVQILDRTGAALALDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQ YQ >gi|296918674|gb|GG773026.1| GENE 13 12867 - 13463 374 198 aa, chain - ## HITS:1 COG:fimE KEGG:ns NR:ns ## COG: fimE COG0582 # Protein_GI_number: 16132134 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 1 198 1 198 198 367 100.0 1e-102 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA GLWERNNLINEKLKREEV >gi|296918674|gb|GG773026.1| GENE 14 13941 - 14543 80 200 aa, chain - ## HITS:1 COG:ECs5271 KEGG:ns NR:ns ## COG: ECs5271 COG0582 # Protein_GI_number: 15834525 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 200 1 200 200 399 99.0 1e-111 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ FYHIISTSGGNAGLSLEIHPHMLHHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN AGRFYGIWDRARGRQRHAVL >gi|296918674|gb|GG773026.1| GENE 15 14954 - 15199 132 81 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_4527 NR:ns ## KEGG: ECIAI1_4527 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 80 51 130 131 150 95.0 2e-35 MERSNFLVAIIKLILRSLAIIPGWFVSLGHEIVTFLFILEIWGNAGDAFSSTSVGKYGFG HYDLNPPQSQLLAGRYGKQTN >gi|296918674|gb|GG773026.1| GENE 16 15997 - 16713 456 238 aa, chain + ## HITS:1 COG:no KEGG:G2583_5112 NR:ns ## KEGG: G2583_5112 # Name: nanC # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 238 4 241 241 454 100.0 1e-126 MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESN TWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDAT KDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDY RYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL >gi|296918674|gb|GG773026.1| GENE 17 16733 - 17839 664 368 aa, chain + ## HITS:1 COG:yjhT KEGG:ns NR:ns ## COG: yjhT COG3055 # Protein_GI_number: 16132131 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 368 37 404 404 699 98.0 0 MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAK DKKWTALAAFPGGPRDQATSVFIDGDLYVFGGIGKNSKGLTQVFNDVHKYNPKTNSWVKL MSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKA EDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFE LDFTGDNLKWNRLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGL KKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGESAGGKAVTDSVLISVK DNKVTVQN >gi|296918674|gb|GG773026.1| GENE 18 18497 - 18883 110 128 aa, chain + ## HITS:1 COG:yjhS KEGG:ns NR:ns ## COG: yjhS COG2801 # Protein_GI_number: 16132130 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 128 199 326 326 260 94.0 5e-70 MVEAFRRDLKQFHSQLNNITAAPWFCGDTTWYWKENFPHAYEAIYGNYQNNVLANIIFVD FQQQGERGLTNAPDEDPDDLSTGYFGSAYRSAENWTTSLRSSHFSAAARRGIISDRFVEA ILQFWRER >gi|296918674|gb|GG773026.1| GENE 19 19466 - 20602 337 378 aa, chain - ## HITS:1 COG:yjhR KEGG:ns NR:ns ## COG: yjhR COG1112 # Protein_GI_number: 16132129 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Escherichia coli K12 # 41 378 1 338 338 679 98.0 0 MYLYEHRRCFNNIIGYCNSLCYHGKLQPKRGMEKGTIFPAMGYLHIDGRGMKPNGGSRYN PLEAETIAAWLVAHKDDIERHYGEPLYKVVGVVTPFSAQVNAIKTSLRKLEINGKDEQGS LTVGTVHSLQGAERAIVLFSPVYSKHEDGRFLDSNSSILNVAVSRAKDSFLVFGDMDLIE MQPAFSPRGLLAKYLFSSDNNALQFEFQKRQDLISAHTQISTLHGVEQHDGFLNKTLAGA QKKITIISPWLSWQKVEQTGFLASMALARSRGIDITVVTDKNCNIAHVDDDKRQEKQHLL NDAVEKLNKMGIATKLVNRVHSKIVIEDEELLCVGSFNWFSAAREDKYQRYDTSLVYRGE GVKNEIKAIYGSLDQRQL >gi|296918674|gb|GG773026.1| GENE 20 20824 - 21069 173 81 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_4909 NR:ns ## KEGG: ECUMN_4909 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 43 1 43 43 88 97.0 1e-16 MTQVLIGDIYLRQQCDVFWLGYTISPAYTRQGYAIEAITATIDWIKENGFSLIKAGVNPE NTLSKKLLIRIGFNFSSIEDG >gi|296918674|gb|GG773026.1| GENE 21 21446 - 21703 244 85 aa, chain + ## HITS:1 COG:STM4501 KEGG:ns NR:ns ## COG: STM4501 COG3811 # Protein_GI_number: 16767745 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 85 1 85 85 130 92.0 5e-31 MNLSRQEQRTLHVLAKGGRIAHVRDSSGRVTSVECYSREGLLLTDCTLAVFKKLKTKKLI KSVNGQPYRINTTGLNNVRAQLDNR >gi|296918674|gb|GG773026.1| GENE 22 21715 - 22266 395 183 aa, chain + ## HITS:1 COG:yjhQ KEGG:ns NR:ns ## COG: yjhQ COG3153 # Protein_GI_number: 16132128 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli K12 # 1 172 1 172 181 333 94.0 8e-92 MTAHHFTFQITDESDASDIREVETRAFGFSKEADLTASLLEDESARPALSLLARHEGKAV GHILFTRATFKGEMDSPLMHILAPLAVIPEYQGMGVGGRLIRTGIEHLRLMGCQTVFVLG HATYYPRHGFEPCAGDKGYPAPYPIPEEHKACWMMQALTAQPMNVTGHIQCAQALMKPEH WRE >gi|296918674|gb|GG773026.1| GENE 23 22318 - 23064 529 248 aa, chain + ## HITS:1 COG:yjhP KEGG:ns NR:ns ## COG: yjhP COG0500 # Protein_GI_number: 16132127 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 248 1 248 248 489 95.0 1e-138 MDIPRIFTISESEHRIHNPFTEEKYATLGRVLRMKPETRILDLGSGSGEMLCTWARDHGI TGTGIDMSSLFTAQARRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGATWIAGGFA GTVELLAQSLKPGGIMLIGEPYWRQLPATDEIAQACGVSSTTDFLTLPGLVSAFDDLGYD VVEMVLADQEGWDRYEAAKWLTMRRWLEANPDDDFAAEVRAELNISPKRHVTYAREYFGW GVFALIAR >gi|296918674|gb|GG773026.1| GENE 24 23192 - 23452 288 86 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0267 NR:ns ## KEGG: ECSE_0267 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 82 1 82 83 139 96.0 4e-32 MSQHEQFCQACGMPMSAPDAHSASDQYCAYCSDSNGNLKPWEEAVSGLASFLDSWQKVGP EEAHKRAKRYLTAMPAWAHKAESDLS >gi|296918674|gb|GG773026.1| GENE 25 23851 - 24972 840 373 aa, chain + ## HITS:1 COG:sgcX KEGG:ns NR:ns ## COG: sgcX COG1363 # Protein_GI_number: 16132126 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Escherichia coli K12 # 1 373 11 383 383 761 99.0 0 MSFSVQETLFSLLQHNAISGHENAVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDAL RLMIFAHMDEVGFMVRKIEPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSY HFAKGDERTQSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVTLYNPPQLLANDLVCSKALD DRLGCTALLGVADAISTTELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSC DTPDLHDYSEVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAP GVITETGYIQVEQDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTALAGMSAAHFPV EPDSGTTQEAHPL >gi|296918674|gb|GG773026.1| GENE 26 24969 - 25247 227 92 aa, chain + ## HITS:1 COG:STM1613 KEGG:ns NR:ns ## COG: STM1613 COG3414 # Protein_GI_number: 16764957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 1 92 2 93 93 149 93.0 1e-36 MKKILVACGTGMSTSTMIAHKLQEFLTEQGISATTAQCCLNEIPLNCNGMDLIVTSMRTN SDYGIPTLNGAALLTGINDDALKQQIKALLTQ >gi|296918674|gb|GG773026.1| GENE 27 25259 - 26572 1248 437 aa, chain + ## HITS:1 COG:sgcC KEGG:ns NR:ns ## COG: sgcC COG3775 # Protein_GI_number: 16132125 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Escherichia coli K12 # 1 437 1 437 437 702 99.0 0 MFDYILSLGGTVFVPIIMIVIGLIFRIPWLQAIKAGVTVGIGFVGMGLVIVMAIDSLSPP IKVMIERFGLALHVFDVGAGPASGVGYATAIGAMIIPVIFLLNVAMLVTRLTKTMNVDIY NYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWTAKRVQNIVGLEGISIPQGYG SSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGVVLGLIFGLAAGEGFK GCASLMITVAAIMVLFPRMIRLIVEGLMPISDGARKFFQKYFKGREVYIGLDTAVTLGHP TTIAVGLLLIPIMLILASILPGNKVLPLADLPVAPFFICMATVIHRGDLVRTLISGVIVM ITVLLIATQFAPYFTEMALKGGFSFAGESAQISALSVGNMFGWSISELMSLGIIGVVVAV GIVASVVLFLRKRELSE >gi|296918674|gb|GG773026.1| GENE 28 26585 - 27391 825 268 aa, chain + ## HITS:1 COG:sgcQ KEGG:ns NR:ns ## COG: sgcQ COG0434 # Protein_GI_number: 16132124 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme # Organism: Escherichia coli K12 # 1 268 1 268 268 553 100.0 1e-157 MSWLKEVIGTEKAVIAMCHLRALPGDPSFDAQLGMNWVIDKAWDDLMALQNGGVDAVMFS NEFSLPYLTKVRPETTAAMARIIGQLMSDIRIPFGVNVLWDPVASFDLAMATGAKFIREI FTGAYASDFGVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTVFN NHPDALCVSGLTAGTRTDSALLKRVKETVPDTVVLANTGVCLENVEEQLSIADGCVTATT FKKDGVFANFVDQARVSQFMEKVHHIRR >gi|296918674|gb|GG773026.1| GENE 29 27522 - 27953 278 143 aa, chain + ## HITS:1 COG:sgcA KEGG:ns NR:ns ## COG: sgcA COG1762 # Protein_GI_number: 16132123 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 1 143 1 143 143 280 98.0 6e-76 MINDIKWVQAQREATDWRQAVEIATRPLVAYGAAQPCYVNGIIENTLNWGPYYLIAPGIA LPHARPEQGANYNQVSITTLRTPVAFGNEECDPVWLLLCVSATDANAHILTIQRISQFID SPQRLAAVGNASTDDALFALVSG >gi|296918674|gb|GG773026.1| GENE 30 27965 - 28597 418 210 aa, chain + ## HITS:1 COG:sgcE KEGG:ns NR:ns ## COG: sgcE COG0036 # Protein_GI_number: 16132122 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Escherichia coli K12 # 1 210 1 210 210 399 99.0 1e-111 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHP LSFHFMVARPQRWFNALAEIRPAWIFVHAETLDYPSETLTEIRHTGARAGLVFNPATPID AWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQTECWADGGITLAAAQQL AAAGAQHMVIGRALFSSSDYRATLAQFATL >gi|296918674|gb|GG773026.1| GENE 31 28614 - 29396 540 260 aa, chain + ## HITS:1 COG:sgcR KEGG:ns NR:ns ## COG: sgcR COG1349 # Protein_GI_number: 16132121 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 260 1 260 260 536 99.0 1e-152 MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIANQYPGMIRGHGCLD FDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARV KVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALS LETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPE TIAQRYQRAGCQLFLPHSIK >gi|296918674|gb|GG773026.1| GENE 32 29699 - 30487 494 262 aa, chain + ## HITS:1 COG:yjhI KEGG:ns NR:ns ## COG: yjhI COG1414 # Protein_GI_number: 16132120 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 262 1 262 262 529 99.0 1e-150 MVRKGCNSLVRAEKILTHIAWVGMASYMELLNKFQYPKSSLLNLLNVMVECGFLIKNKNG YYSLGIKNYELGCQALHRQNIFEVTKRPMQELSLKSGLVCHLGAMESISAIYLDKIESPD SVPTSKSWIGKKLELHITALGKALLAWKTREELDYFLEALTLTPHTRNTFTDKKLFLEEL QKTRLRGWAIDNEESTYGAVCLSMPVFNMYNRVNYAISLSGDPVVYSGNKIDSYLELLRK CAEQISYGLGYRNENEHLRKGN >gi|296918674|gb|GG773026.1| GENE 33 30438 - 31397 788 319 aa, chain + ## HITS:1 COG:yjhH KEGG:ns NR:ns ## COG: yjhH COG0329 # Protein_GI_number: 16132119 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Escherichia coli K12 # 1 319 1 319 319 645 99.0 0 MGWDTETKMSIYEKETEVMKKFSGIIPPVSSTFHRDGTLDKKAMREVADFLINKGVDGLF YLGTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGVGSPSTDEAVKLAQHAQAYGADGI VAINPYYWKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENIVG IKDTIDSVGHLRTMINTVKSVRPSFSVFCGYDDHLLNTMLLGGDGAITASANFAPELSVG IYRAWREGDLATAATLNKKLLQLPAIYALETPFVSLIKYSMQCVGLPVETYCLPPILEAS EEAKDKVHVLLTAQGILPV >gi|296918674|gb|GG773026.1| GENE 34 31408 - 33375 1484 655 aa, chain + ## HITS:1 COG:yjhG KEGG:ns NR:ns ## COG: yjhG COG0129 # Protein_GI_number: 16132118 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli K12 # 1 655 1 655 655 1312 99.0 0 MSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELD RDGILLLSTLGGLRGADGKPVALALHQGHYELDIQIKAAAEVIKANHALPYAVYVSDPCD GRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIA TVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAG TSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAM TVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAF MAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADE VIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEK SAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVS TGACIGHVGPEALAGGPIGKLRTGDVIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAI LNARPSHQDLLPDPELPDDTQLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN >gi|296918674|gb|GG773026.1| GENE 35 33482 - 34831 947 449 aa, chain + ## HITS:1 COG:yjhF KEGG:ns NR:ns ## COG: yjhF COG2610 # Protein_GI_number: 16132117 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 449 1 449 449 695 100.0 0 MPLIIVVAGIALLLLLTIKIKLNTFVSLIIVSIAVAIASGMDLSKVVTSVESGLGGTLGH IGLIFGFGVMLGRLLADAGGAQRIALTMLNYFGKNKLDWAVVCSAFIVGIALFFEVGLIL LVPILFAIAREAKISPMFMCVPMLSGLLVAHGFLPPHPGPTVIAREYGADVGLVLIYGII VGIPTFILCGPVLNKFCQRIIPDAFKKEGNIASLGATRRFSESEMPGFGISFLTAMLPVI LMAVVTIIQMTHAKSAADSGLFYNVILFLGNSTIAMLISLLFAIYTMGLGRGKTIPDLMD SCGKAIAGIAGLLLIIGGGGAFKQVLIDSGVGQYISTLVSGMDINPILMAWGVAAFLRIC LGSATVAAISTAGLVIPLLAVHPNTNLALITLATGAGSCICSHVNDASFWMIKDFFGLTT KETLLSWTLMSTLLSISGLIFILLASLVL >gi|296918674|gb|GG773026.1| GENE 36 35178 - 36164 544 328 aa, chain + ## HITS:1 COG:yjhU KEGG:ns NR:ns ## COG: yjhU COG2390 # Protein_GI_number: 16132116 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Escherichia coli K12 # 63 328 1 266 266 534 99.0 1e-151 MDRDQTNSSLFNDDPVLHATWLYYQEGKSQTEVAAIMGVSRVTVVKYLQTARENGLVHIN LDVNVFGSIDAALQIRDKFNLQRVIIVPDGEHAGKRDDTKLMRTRLSRAGGMYLNQVIEN GDVLGVAWGRTIHQMSKTMTPKSCKNVTVIQMLGSMPSQPDLTIIESSSQIAYKLSGRVA SLHVPAVVSSARLAMELQAEPIIRSNFDVLTRCTKAFFVVGNALDENPLIRVGVLNKKEM QTYRDLGAVGVICGRFYDKEGMPVVADVDQRILGISLAQLRQIERKIFLAGGERGYDATL GALLGGYVTDLIVDEGTAEFLLACELPH >gi|296918674|gb|GG773026.1| GENE 37 36205 - 37209 753 334 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_4892 NR:ns ## KEGG: ECUMN_4892 # Name: not_defined # Def: putative integral membrane protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 334 1 334 334 582 99.0 1e-165 MFIVESYAVAIIMCFITMICWGSWANTTKLVSNKKWEFPLFYWDYSIGLLLCSLLFAFTL GSMGEAGRSFIPDIQQASSSSLMSAILAGIIFNISNILLVASINLAGMAVAFPVGVGLAL ALGVITTYIGNPQGDPLILFLGVACVVIAIIFTAIAYGRVTQEADKSRRNKGLITAILAG IIMGWFFRFLADSMSDNFSQPASGLMTPYSALVLFAVGLFLSNFVLNTLVMKKPISGEPV NGKMYFSGSLRDHVCGWLGGMIWCVGLAFSLIASGQAGYAISYGLGQGATMIAVIWGVFI WREFASAPAGTNKLLLTMFISYIVGIVLIIAANQ >gi|296918674|gb|GG773026.1| GENE 38 37313 - 37795 299 160 aa, chain - ## HITS:1 COG:fucA KEGG:ns NR:ns ## COG: fucA COG0235 # Protein_GI_number: 16130707 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 2 159 55 212 215 189 56.0 3e-48 MIVFVDDKGIPEAGKIPSSEWLFHLACYKARPELNAVIHTHAVNSTAVAIHNHSIPAIHY MVAVSGTDHIPCIPYYTFGSPELADGVSKGIRESKSLLMQHHGMLAMDVTLEKTLWLAGE TETLADLYIKCGGLHHDVPVLSEAEMTIVLEKFKTYGLKA >gi|296918674|gb|GG773026.1| GENE 39 37985 - 39100 778 371 aa, chain - ## HITS:1 COG:SMb20624 KEGG:ns NR:ns ## COG: SMb20624 COG0182 # Protein_GI_number: 16265284 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Sinorhizobium meliloti # 1 360 1 362 364 442 62.0 1e-124 MNIKGKHYRTVWVSGDGKAVEIIDQTKLPFKFEVVALTSAEMAATAIQEMWVRGAPLIGV VAAYGIALGMNHDASDMGLQRYYDLLIKTRPTAINLKWALDRMIDTLKDLCVSERKDVAW ALAAEIAEEDVALCEQIGLHGTEVIREIAQKKPAGSVVNILTHCNAGWLATVDWGTALSP IYKAHENGIPVHVWVDETRPRNQGGLTAFELGSHGIPHTLIADNAGGHLMQHGDVDLCIV GTDRTTARGDVCNKIGTYLKALAAHDNHVPFYVALPSPTIDWTIEDGKSIPIEQRDGKEQ SHVYGINPQGELSWVNTAPEGTRCGNYAFDVTPARYITGFITERGVCAASKSALADMFAD LKSKALQGEQH >gi|296918674|gb|GG773026.1| GENE 40 39110 - 40369 962 419 aa, chain - ## HITS:1 COG:mll7285 KEGG:ns NR:ns ## COG: mll7285 COG4857 # Protein_GI_number: 13476069 # Func_class: R General function prediction only # Function: Predicted kinase # Organism: Mesorhizobium loti # 1 412 1 410 423 343 44.0 4e-94 MTDSIPSGYKPLTCDTLPGYLSSRLTPSCEPGGLPEEWKVSEVGDGNLNMVFIVEGTHKT IIVKQALPWLRAGGEGWPLSLSRAGFEYNVLCQEAKYAGHTLIPQVYFYDPEMALFAMEY LTPHVILRKELINGKKFPKLAEDIGRFLAQTLFNTSDIGMSAEQKKALTAEFALNHELCK ITEDLIFTEPYYNAERNNWTSPELDDAVHKAWADVEMIQVAMRYKYKFMTEAQALLHGDL HSGSIMVTDTDTKVIDPEFGFMGPMAFDIGNYIGNLLLAYFSRPGWDANEQRRADYQEWL LQQIVQTWSVFTREFRQLWDNKTQGDAWPTEMYQQNRAALEDAQDQFFATLLEDSLVNAG MEMNRRIIGFAGVAELKQIENTELRAGCERRALTMARDLIVNARQFKNMDSVIQSAKVK >gi|296918674|gb|GG773026.1| GENE 41 42527 - 44602 942 691 aa, chain + ## HITS:1 COG:YPO0387 KEGG:ns NR:ns ## COG: YPO0387 COG1401 # Protein_GI_number: 16120721 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Yersinia pestis # 436 680 436 680 687 246 53.0 9e-65 MDLVDSVEAGKLTISELIDALAKDKNYSASKWDQRYREFTTLLQQTSTFSEPETDGLVKR LWYERDNGIASIRQGVPSLAEYQQSLPLLRELTERIRQQPDEETYQYVGNALQQAKENGL LKRMYRSLRNRVFAAFSPENYTSTVDENAFSKAAEFLNQHFHLGLALTGNWLQKNYELKQ AIHAQSPDTDPYYVNMAIWHLYELLRERDNEQKQEKIASTTFITSNEPIENKIILHSPTN VIFFGPPGTGKTFRLQQKMKEYTSHAVPADRDAWLDSRLESLNWMQVITLVLLDLGKRAK VRQIIEHMWFQRKALLNGRNGNLSNTAWAALQSYTVPESLTVDYKNRREPAVFNKTDNSE WLLVDSQLEQVEDLVELYAELKRGPKSAEAIQRFAVVTFHQSYGYEEFIEGIRARSDESG NISYPIEPGIFMRLSQRANADPGHRYAIFIDEINRGNISKIFGELISLIEVDKRAGMPNA MSLQLAYSGDHFSVPANVDIIGAMNTADRSLALMDTALRRRFDFVEMMPDLSLLSGAKVK GIELESLLEKLNSRIEALYDREHTLGHAFFMPVKNALDAGDEEAAFKQLKIAFQKKIIPL LQEYFFDDWNKIRLVLADNQKQDDNLQFVIEKTDDLDTLFGNNHGLRHHDQQSTAYELKD FDQEIWNIPQAYRSIYQPQQTPLDEQAVNHG >gi|296918674|gb|GG773026.1| GENE 42 44595 - 45881 365 428 aa, chain + ## HITS:1 COG:YPO0388 KEGG:ns NR:ns ## COG: YPO0388 COG4268 # Protein_GI_number: 16120722 # Func_class: V Defense mechanisms # Function: McrBC 5-methylcytosine restriction system component # Organism: Yersinia pestis # 6 411 8 420 438 308 41.0 2e-83 MGEVISVFEYDLLGSDKAASVGAKLVPPLVFNYLEALSLASNQGSQFLKLTSRSGFKLLQ VQNYAGMLSTPHGFQLEILPKVGKNLTAANARQTLLTMLSHLPGFRHIETQQATLQAQRM PLLEIFIHQFLHSVSQLLKQGLRSDYVSEQGNLAFMKGKLMLSAQLRHNAVNRHKFCVDY DDYMPDCAANRLLHSALDKLLSLKLSSENQRWLYELRFAFDGIPLSRDIERDINNLRLER GMAHYNEPMAWAQLILRGMSPSALQGNTKAISLLFPMEAVFESFVAQTLPYELPSHLKVI PQAATYSLVKHGSNDCFKLRPDLLIQSRRPVQTKLVMDTKWKLINSNSQKTTQYGLAQAD FYQMFAYGQKYLNGIGEMYLIYPAHDQFNQPIQQHFAFSKTLKLWVVPYQITANRGERMM WVKDVSSI >gi|296918674|gb|GG773026.1| GENE 43 47011 - 47730 130 239 aa, chain + ## HITS:1 COG:no KEGG:Rxyl_2230 NR:ns ## KEGG: Rxyl_2230 # Name: not_defined # Def: hypothetical protein # Organism: R.xylanophilus # Pathway: not_defined # 1 234 307 539 541 164 38.0 4e-39 MYLSDIISLLEAENEGHTVISWFAEEVWNRLKHSVDDSEKALRLSKILRDNRHTYMNLLK KIMDEGYYTFLASLLHLEVANYNPIFEGLCISNHLTHYKSLKKIKRESKYAAVQKTRRIR IAFTSLNDYHRKENRNAFIVSNELSEKFFSEAMDNLKSLSEITSCLDEKISGIISENSDS KNEFRTIITDLREIVTNNKEKFNLILKYLISGMSEIGKELESYWENDRYVRSIPEEFIE >gi|296918674|gb|GG773026.1| GENE 44 48534 - 48776 111 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHKEKEAVQHTTVDYFQICLHILSIHILTDLGMVAIFTMSKIVFYPREKLQDYNRSRMIL FSSEVKQQLIPKSVMQCPHF >gi|296918674|gb|GG773026.1| GENE 45 48926 - 50548 125 540 aa, chain - ## HITS:1 COG:no KEGG:Rxyl_2233 NR:ns ## KEGG: Rxyl_2233 # Name: not_defined # Def: hypothetical protein # Organism: R.xylanophilus # Pathway: not_defined # 21 533 12 527 544 301 35.0 5e-80 MKHIHLINSLSLDETTKFTKKATGKYYTDPKIALLMIEKLLPLINSCDKKSYNVADPFSG DGRLITLLIKQWMINGFPDVEWNVYLFDIENTGLTYAKNALSELKLAGANINITIKNSDV FYEFKKYVDYFDCVITNPPWENIKPDSRELDFFEPSMKSMYIDSLREFDDYLSRVLPYSQ PKRKFAGWGTNLSRVGAELSLEICNKNGLVAIVMPASFFADEQSYILREKFFNSGRIDCI NYYPAEAKLFGGADVSSCSFIFNKGESLNDNIQLSVYDKNLNIKSLGFFDLSSIDSQYLS IPVSQGVHAVHLLRKLQEGYPTWGSLEKNGEIWAGREIDETGSSDWTQKSGGGLLFIKGK MIGRYNFHNEKSLRITKKIDKVLSNSNFVRIAWRDISRPSQKRRMIATIIPPNSLAGNSL GVVYYKSGSQDSLFSLLGIINSLCFEFQLRSFLATGHVSLSALRKTAIPSEKILLQHSEL KQLVISCIEGCCDAELKIEAYVAKNIYKLDLNEFNKLLSSFDKIELAEKESLLRIFQHYD >gi|296918674|gb|GG773026.1| GENE 46 50954 - 51352 163 132 aa, chain - ## HITS:1 COG:YPO1873 KEGG:ns NR:ns ## COG: YPO1873 COG2801 # Protein_GI_number: 16122124 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 129 186 314 319 149 55.0 1e-36 MRSYTLLAKMYALGVLSSYSRPRVSNDNPYSESLFRTLKYCPWWPENGFRTINDARIWVN RFVNWYNFEHKHSGIKYVTPAERHQGNDMKILAARKTVYQLAREQHPERWGKHLRNWDYI SEVYLNPEKEAA >gi|296918674|gb|GG773026.1| GENE 47 51979 - 52491 311 170 aa, chain - ## HITS:1 COG:no KEGG:VV0548 NR:ns ## KEGG: VV0548 # Name: not_defined # Def: hypothetical protein # Organism: V.vulnificus_YJ016 # Pathway: not_defined # 1 170 1 170 170 170 56.0 2e-41 MPGQPIPSELKEKGLIWLLPPYCWSHRQIARKLKISASVVSKWRCELVEQGLLPENEKIT SVDVEDWTPERRFSVVLETATLSEMELADYCRRTGLFVEQVKEWRAISIQAHEKKLTENI RTDRALRDAKNKLRELEKELKRKDKALAEAAALLILREKFNALWDNSEED >gi|296918674|gb|GG773026.1| GENE 48 52724 - 53149 220 141 aa, chain - ## HITS:1 COG:no KEGG:SPAB_01194 NR:ns ## KEGG: SPAB_01194 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 1 115 1 113 133 172 79.0 5e-42 MMSGFKRTQRDYPLSFKIAVVEKVEKGEMTYKQAGCSYGIQGRSTVLVWLRKYGRLDWSP GLPDQVKRRLPVALATVPLTPEQRIRELEEQLEQASQKTEFFNYLSITCSMTNGYNCHQN AQAEWINGILKMSFYSRVLQS >gi|296918674|gb|GG773026.1| GENE 49 53513 - 53668 94 51 aa, chain - ## HITS:1 COG:no KEGG:c5146 NR:ns ## KEGG: c5146 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 2 51 1 49 174 75 78.0 6e-13 MMSDTTLSRPEVVSGHTDVIYSTSVCHILAVRKSTLLPIDTIIRHQVSDIS >gi|296918674|gb|GG773026.1| GENE 50 53771 - 53947 153 58 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4897 NR:ns ## KEGG: EC55989_4897 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 57 125 181 189 115 96.0 6e-25 MKSLTTETALDILITWLQDNIDCESGIIFDNDEDKTDSAALLPCIAQAREGIRTLRQQ >gi|296918674|gb|GG773026.1| GENE 51 53964 - 54452 265 162 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_4901 NR:ns ## KEGG: EcE24377A_4901 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 162 2 163 163 322 98.0 4e-87 MKLALTLEADSVNVQALNMGRIVVDIDGVNLAELINMVCDNGYSLRVVDESDRTSADCTP PFVALTGIRCSTAHITETDNAWLYSLSHQTSDFGESEWIHFTGTGYLLRTDTWSYPVLRL KRLGLSKTFRRLVVTLIRCYGVSLIHLDASAGYLPGLPTFDW >gi|296918674|gb|GG773026.1| GENE 52 54449 - 54826 231 125 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3413 NR:ns ## KEGG: EcE24377A_3413 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 125 1 125 125 238 93.0 4e-62 MKTLPDTHVRKVSRCPSPVTIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC DAVNFLVEKYALVRTDLPGFSACTHSQLINSIDILRARRATGLMIRDNYSTVNNITLGKH PEAKR >gi|296918674|gb|GG773026.1| GENE 53 54915 - 55163 143 82 aa, chain - ## HITS:1 COG:no KEGG:ROD_49671 NR:ns ## KEGG: ROD_49671 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 82 41 122 122 160 93.0 2e-38 MHYLADRAGIRGRFRDADAYHPDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCE ADTLGSCGYVYLAFYPTSETKK >gi|296918674|gb|GG773026.1| GENE 54 55446 - 55556 96 36 aa, chain - ## HITS:1 COG:no KEGG:c4574 NR:ns ## KEGG: c4574 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 36 38 73 73 75 100.0 5e-13 YTGREVQDIPGVLAVFAERRKDSFGPYVRLMSVTLN Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:21:04 2011 Seq name: gi|296918673|gb|GG773027.1| Escherichia coli MS 110-3 genomic scaffold Scfld377, whole genome shotgun sequence Length of sequence - 7244 bp Number of predicted genes - 11, with homology - 11 Number of transcription units - 4, operones - 3 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 29 - 376 314 ## ECS88_0575 head decoration protein (head protein GPshp) + Term 380 - 422 10.2 2 1 Op 2 . + CDS 434 - 1462 1155 ## UTI89_C1317 putative prophage capsid protein gp7 + Term 1468 - 1505 5.0 3 2 Op 1 . + CDS 1514 - 1888 296 ## ECUMN_1349 hypothetical protein 4 2 Op 2 . + CDS 1863 - 2234 295 ## APECO1_254 putative head-tail joining protein of prophage 5 3 Op 1 . + CDS 2579 - 2824 105 ## ECO26_0614 putative minor tail protein 6 3 Op 2 . + CDS 2821 - 3216 468 ## APECO1_256 putative tail component of prophage 7 3 Op 3 . + CDS 3224 - 3964 829 ## COG5492 Bacterial surface proteins containing Ig-like domains 8 3 Op 4 . + CDS 3980 - 4402 347 ## APECO1_258 putative tail component of prophage 9 3 Op 5 . + CDS 4429 - 4818 202 ## ECUMN_1428 Minor tail protein T 10 3 Op 6 1/0.000 + CDS 4811 - 6889 2063 ## COG5281 Phage-related minor tail protein + Term 6922 - 6990 31.1 + Prom 6891 - 6950 80.3 11 4 Tu 1 . + CDS 7054 - 7243 62 ## COG5281 Phage-related minor tail protein Predicted protein(s) >gi|296918673|gb|GG773027.1| GENE 1 29 - 376 314 115 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0575 NR:ns ## KEGG: ECS88_0575 # Name: not_defined # Def: head decoration protein (head protein GPshp) # Organism: E.coli_S88 # Pathway: not_defined # 1 115 1 115 115 196 100.0 2e-49 MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSPTPALTPLMLDEATGKLVVWDGQKAGS AVGILVLPLEGTETALTYYKSGTFATEAIHWPESVDEHKKANAFAGSALSHAALP >gi|296918673|gb|GG773027.1| GENE 2 434 - 1462 1155 342 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C1317 NR:ns ## KEGG: UTI89_C1317 # Name: not_defined # Def: putative prophage capsid protein gp7 # Organism: E.coli_UTI89 # Pathway: not_defined # 1 342 1 342 342 700 100.0 0 MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPVVEG KVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPSQLNDPAYRRLRIITDNLKQEE HAIVQVEEMQAVNAVLYGKYTMEGDQFEKIEVDFGRSTKNNITQGSGKEWSKQDRDTFDP THDIDLYCDLASGLVNIAIMDGTVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVS FKGYYGDLAIVVAKTSYIAEDGIEKRYLPDGMLVLGNTAADGIRCYGAIQDAQALSEGVV ASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPDEFVVVQVK >gi|296918673|gb|GG773027.1| GENE 3 1514 - 1888 296 124 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1349 NR:ns ## KEGG: ECUMN_1349 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 124 17 140 140 215 100.0 5e-55 MATKEQNLKRLDELALILGREPDISGSAAEIAQRVAEWEEEMQSSGDDVQVMNMDIRERE TAAHDVREETSGALTRIRVLTCLHLCGVDGETGESVELADVGRVILIMSSDAKTHVDGGM AVYA >gi|296918673|gb|GG773027.1| GENE 4 1863 - 2234 295 123 aa, chain + ## HITS:1 COG:no KEGG:APECO1_254 NR:ns ## KEGG: APECO1_254 # Name: not_defined # Def: putative head-tail joining protein of prophage # Organism: E.coli_APEC # Pathway: not_defined # 1 123 7 129 129 245 99.0 3e-64 MVEWLFMRDFQNAFDAALAGVDSTIVEVMGISAQFPSGAQRGGEVHGVFDDPESLGFASS GIRIEGSNPSLFVLTDTVCAVRRGDTLTINGEMFWVDRVSPDDGGSCYLWLNRGQPPAAS RRR >gi|296918673|gb|GG773027.1| GENE 5 2579 - 2824 105 81 aa, chain + ## HITS:1 COG:no KEGG:ECO26_0614 NR:ns ## KEGG: ECO26_0614 # Name: not_defined # Def: putative minor tail protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 81 112 192 192 142 98.0 4e-33 MLVVGNRRIPGAFIQQLKNGRWHVMQRVAGKNRYPIDVVKIPMAVPLTTAFKQNIERIRR ERLPKELGYALQHQLRMVIKR >gi|296918673|gb|GG773027.1| GENE 6 2821 - 3216 468 131 aa, chain + ## HITS:1 COG:no KEGG:APECO1_256 NR:ns ## KEGG: APECO1_256 # Name: not_defined # Def: putative tail component of prophage # Organism: E.coli_APEC # Pathway: not_defined # 1 131 1 131 131 235 100.0 5e-61 MKHTELRAAVLDALEKHDTGATLFDGRPAVFDEEDFPAIAVYLTGAEYTGEELDSDTWQA ELHIEVFLPAQVPDSELDSWMESRIYPVMSDIPALSDLITSMVASGYDYRRDDDAGLWSS ADLTYVITYEM >gi|296918673|gb|GG773027.1| GENE 7 3224 - 3964 829 246 aa, chain + ## HITS:1 COG:Z1894 KEGG:ns NR:ns ## COG: Z1894 COG5492 # Protein_GI_number: 15801361 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Escherichia coli O157:H7 EDL933 # 1 246 11 256 256 407 96.0 1e-114 MPTPNPLAPVKGAGTTLWVYNGSGDPYANPLSDNDWSRLAKIKDLTPGELTAESYDDSYL DDEDADWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVF RGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTAATGMTVTPASSSVVKGQSTT LTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVNGVAAGKVNIPVVSGNGELAAVAE ITVTDS >gi|296918673|gb|GG773027.1| GENE 8 3980 - 4402 347 140 aa, chain + ## HITS:1 COG:no KEGG:APECO1_258 NR:ns ## KEGG: APECO1_258 # Name: not_defined # Def: putative tail component of prophage # Organism: E.coli_APEC # Pathway: not_defined # 1 140 1 140 140 249 100.0 2e-65 MFLKTESFEHNGVTVTLSELSALQRIEHLALMKQQAEQAESDSNRQVTVEDAIRTGAFVV AMSLWHNHPQKTKQPSMNEAVKQIEQEVLTTWPAEAISHAENVVYRLSGMYGFVVNDAPD QAEDSGPAEPVSAGKCSTVS >gi|296918673|gb|GG773027.1| GENE 9 4429 - 4818 202 129 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1428 NR:ns ## KEGG: ECUMN_1428 # Name: not_defined # Def: Minor tail protein T # Organism: E.coli_UMN026 # Pathway: not_defined # 1 129 16 144 144 243 97.0 2e-63 MGRPDWRAMLAGMSSTEYADWHRFYSTHYFHDVLLDMHFSGLTYTVLSLFFSDPDMHPLD FSLLNRREDDEEPEDDVLMQKAAGLTGGVRFDPDGNEVIPASPDMAGMTEDDVMLMTVSE GIAGGVRYG >gi|296918673|gb|GG773027.1| GENE 10 4811 - 6889 2063 692 aa, chain + ## HITS:1 COG:ECs1643 KEGG:ns NR:ns ## COG: ECs1643 COG5281 # Protein_GI_number: 15830897 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Escherichia coli O157:H7 # 1 690 1 690 849 1099 98.0 0 MAEPVGDLVVDLSLDAARFDEQMARVRRHFSGTESDAKKTAAVVEQSLSRQALAAQKAGI SVGQYKAAMRMLPAQFTDVATQLAGGQSPWLILLQQGGQVKDSFGGMIPMFRGLAGAITL PMVGATSLAVATGALAYAWYQGNSTLSDFNKTLVLSGNQSGLTADRMLVLSRAGQAAGLT FNQTSESLSALVKAGVSGEAQIASISQSVARFSSASGVEVDKVAEAFGKLTTDPTSGLTA MARQFHNVTAEQIAYVAQLQRSGDESGALQAANEAATKGFDDQTRRLKENMGTLETWADR TARAFKSMWDAVLDIGRPDTAQEMLIKAEAAFKKADDIWNLRKDDYFVNDEARARYWDDR EKARLALEAARKKAEQQSQQDKNAQQQSDTEASRLKYTEEAQKAYERLQTPLEKYTARQE ELNKALKDGKILQADYNTLMAAAKKDYEATLKKPKQSGVKVSAGDRQEDSAHAALLTLQA ELRTLEKHAGANEKISQQRRDLWKAESQFAVLEEAAQRRQLSAQEKSLLAHKDETLEYKR QLAALGDKVTYQERLNALAQQADKFAQQQRAKRAAIDAKSRGLTDRQAEREATEQRLKEQ YGDNPLALNNVMSEQKKTRAAEDLLRGNWMAGLKSGWSEWEESATDSMSQVKSAATQTFD GIAQNMAAMLTGSEQNWRSFTRSVLSMMTETS >gi|296918673|gb|GG773027.1| GENE 11 7054 - 7243 62 63 aa, chain + ## HITS:1 COG:ECs2949 KEGG:ns NR:ns ## COG: ECs2949 COG5281 # Protein_GI_number: 15832203 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Escherichia coli O157:H7 # 1 63 803 865 881 107 84.0 6e-24 MRGYATGGYVGGTGSPAQMRRSEGIRFEQNNNVVIQNDGTNGLPGPQMMKAVYDMARKGA RDE Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:21:28 2011 Seq name: gi|296918672|gb|GG773028.1| Escherichia coli MS 110-3 genomic scaffold Scfld382, whole genome shotgun sequence Length of sequence - 539 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 211 - 256 -0.9 1 1 Tu 1 . - CDS 282 - 539 164 ## UTI89_C2250 hypothetical protein Predicted protein(s) >gi|296918672|gb|GG773028.1| GENE 1 282 - 539 164 85 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2250 NR:ns ## KEGG: UTI89_C2250 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 2 85 118 201 201 180 100.0 2e-44 AWCRAGDYRAPGSLAGMIEQAWCSALGVDAGCHATLVHFPAWPAVWLARNDDTGFQQVLE RADYLAKEHTKAHCTGERNFGCSRG Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:21:32 2011 Seq name: gi|296918671|gb|GG773029.1| Escherichia coli MS 110-3 genomic scaffold Scfld414, whole genome shotgun sequence Length of sequence - 9940 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 8, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 229 228 ## COG2963 Transposase and inactivated derivatives - Prom 320 - 379 2.7 + Prom 1706 - 1765 4.9 2 2 Tu 1 . + CDS 1843 - 2796 556 ## COG4571 Outer membrane protease + Term 2848 - 2894 4.1 + Prom 3148 - 3207 9.2 3 3 Tu 1 . + CDS 3229 - 4338 359 ## COG0451 Nucleoside-diphosphate-sugar epimerases + Term 4498 - 4539 4.0 + Prom 4746 - 4805 6.4 4 4 Tu 1 . + CDS 5013 - 5309 76 ## EcSMS35_A0097 Mig-14 family protein + Term 5357 - 5392 4.4 + Prom 5820 - 5879 2.7 5 5 Op 1 . + CDS 5992 - 6732 310 ## COG0582 Integrase + Prom 6741 - 6800 1.6 6 5 Op 2 . + CDS 6822 - 6941 64 ## gi|226200979|ref|YP_002756586.1| hypothetical protein p026VIR_p035 + Term 6972 - 7022 9.1 - Term 6960 - 7009 15.2 7 6 Tu 1 . - CDS 7017 - 7931 651 ## EcSMS35_A0095 repFIB replication protein A + Prom 8488 - 8547 1.8 8 7 Tu 1 . + CDS 8764 - 9096 211 ## COG4584 Transposase and inactivated derivatives + Term 9326 - 9362 -1.0 9 8 Tu 1 . + CDS 9507 - 9743 138 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair Predicted protein(s) >gi|296918671|gb|GG773029.1| GENE 1 1 - 229 228 76 aa, chain - ## HITS:1 COG:ECs1381 KEGG:ns NR:ns ## COG: ECs1381 COG2963 # Protein_GI_number: 15830635 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 76 1 76 108 134 94.0 3e-32 MTKNTRFSPEVRQRAIRMVLESQGEYDSQWAAICSIAPKTGCTPETLRVWVRQYERDTGG GDGGLTTAERQRLKEL >gi|296918671|gb|GG773029.1| GENE 2 1843 - 2796 556 317 aa, chain + ## HITS:1 COG:ECs1663 KEGG:ns NR:ns ## COG: ECs1663 COG4571 # Protein_GI_number: 15830917 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protease # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 475 74.0 1e-134 MYLKILATALSAPVAFAALASDTGLSFTPEKISTEIDFGTLSGKAKERVYLPEEKGRKAS QLDWKYSNAPIVKGAFNWDLLPRVSVGASGWTTLAGRGGNMVDRDWLDTSNPGTWTDESK HPNTRLNFANEFDLNIKGWLLNQPDYQLGLMAGYQENRYSFTAKGGSYIYSSEGGFRDET GSFPDGERAIGYKQHFKMPYIGLTGNYRYDSFEFGGSFKYSGWVKASDNDEHYNPEKRIT YRSDVNNQNYYSVSLHAGYYITPAAKVYVEGTWNRITNKKGDTSLYSRNLNISDHTKNGA GIESYNFMTTAGLKYYF >gi|296918671|gb|GG773029.1| GENE 3 3229 - 4338 359 369 aa, chain + ## HITS:1 COG:YPO1559 KEGG:ns NR:ns ## COG: YPO1559 COG0451 # Protein_GI_number: 16121830 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 1 369 11 379 379 488 62.0 1e-138 MKLLLLTGATGFLGGAVLDKLLDNCNNINLLLLVRAPTPQAGLERIKENMRKFNVCEERL HALTNDNILPGDLNNPEAFLMDPRLDEVTHVINCAAIASFGNNPFIWNVNVTGTLAFARR MAKVAGLKRFLHVGTAMSCTPHTGSLVKEESASSETGEHLVEYTHSKATIEYLMRKQCPD LPLLVARPSIIVGHSRLGCLPSTSIFWVFRMGLMLQKFMCSLDDKIDVIPVDYCADALLM LLESSLINGEIVHISAGKESSVTFSAIDEAVARALNCDPVGDRYTKVSYDILAMSRHDFK NIFGPCNERLMLKAIRLYGAFSMLNVCFSNDKLLSIGMPKPPKFTDYIKYCIETTKHLSI QQQMEVDFK >gi|296918671|gb|GG773029.1| GENE 4 5013 - 5309 76 98 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0097 NR:ns ## KEGG: EcSMS35_A0097 # Name: not_defined # Def: Mig-14 family protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 98 205 302 302 212 100.0 4e-54 MFGHVLFWDNKPCAIDIVLKSESSCNVYYDVPNGAVLNDENCMKLSPGSVLMWLNIDKAR RYCQDNNKKMIYSIGAFRPEWKYKLLWSVPCKVGKCLC >gi|296918671|gb|GG773029.1| GENE 5 5992 - 6732 310 246 aa, chain + ## HITS:1 COG:PSLT031 KEGG:ns NR:ns ## COG: PSLT031 COG0582 # Protein_GI_number: 17233417 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 15 240 16 257 260 174 49.0 2e-43 MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQ RHHMLFATLWNTGMRIGEARMLTPESFDLNGVRPFVRILSEKVRARRGRPPKDEVRLVPL TDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAVRRAEADGVHFSIPVTPHTFR HSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILR TLPPLR >gi|296918671|gb|GG773029.1| GENE 6 6822 - 6941 64 39 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|226200979|ref|YP_002756586.1| ## NR: gi|226200979|ref|YP_002756586.1| hypothetical protein p026VIR_p035 [Escherichia coli] hypothetical protein [Escherichia coli] # 1 37 1 37 127 67 89.0 4e-10 MFYEGSNASASGYGITYVRDRQMAAQLQTALQETEYKLQ >gi|296918671|gb|GG773029.1| GENE 7 7017 - 7931 651 304 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_A0095 NR:ns ## KEGG: EcSMS35_A0095 # Name: repA # Def: repFIB replication protein A # Organism: E.coli_SECEC # Pathway: not_defined # 1 304 22 325 325 562 99.0 1e-159 MALMRLGVFVPTLKSLKNSKKNTLSRTDATEELTRLSLARAEGFDKVEITGPRLDMDNDF KTWVGIIHSFARHNVIGDKVELPFVEFAKLCGIPSSQSSRRLRERISPSLKRIAGTVISF SRTDEKHTREYITHLVQSAYYDTERDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRE SAQALYTFIESLPRDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQ RGRTKFFCIHYRRPRLKAPNDESKENPLQPSPAEKVSPEMAEKLALLEKLGITLDDLEKL FKSR >gi|296918671|gb|GG773029.1| GENE 8 8764 - 9096 211 110 aa, chain + ## HITS:1 COG:YPCD1.97c KEGG:ns NR:ns ## COG: YPCD1.97c COG4584 # Protein_GI_number: 16082780 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 75 102 1 28 308 59 96.0 2e-09 MIKQMRQQGAYIVDIAAQIGCSERTVRRYLKYPEPPARKTRHKMVKLKPFMDYIDMRLAE NVWNSEVIFAEIKAMGYTGGRSMLRYYIQPKRKMRPSKRTRRELPVKRET >gi|296918671|gb|GG773029.1| GENE 9 9507 - 9743 138 78 aa, chain + ## HITS:1 COG:PSLT054 KEGG:ns NR:ns ## COG: PSLT054 COG0389 # Protein_GI_number: 17233501 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Salmonella typhimurium LT2 # 1 77 347 423 424 121 67.0 3e-28 MLADFTPSGIAQPGLFDEIQPRKNSEKLMKTLDELNQSGKGKVWFAGRGTAPEWQMKREM LSQCYTTKWRDIPLARLG Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:21:45 2011 Seq name: gi|296918670|gb|GG773030.1| Escherichia coli MS 110-3 genomic scaffold Scfld430, whole genome shotgun sequence Length of sequence - 812 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 626 467 ## COG3596 Predicted GTPase 2 2 Tu 1 . - CDS 555 - 731 64 ## gi|300976683|ref|ZP_07173540.1| hypothetical protein HMPREF9531_01338 Predicted protein(s) >gi|296918670|gb|GG773030.1| GENE 1 3 - 626 467 207 aa, chain + ## HITS:1 COG:ECs1395 KEGG:ns NR:ns ## COG: ECs1395 COG3596 # Protein_GI_number: 15830649 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 207 86 289 290 123 33.0 2e-28 MTLVDLPGIGETPQHDQEYRTLYRQLLPELDLIIWILRADERAYAADITMHQFLLNEGAD PSRFLFVLSHADRVFPAEEWNATEKCPSRQQALSLATVTARVATLFPSSFPVLSVAAPVG WNLPAFVSLMIHALPPQATSAVYSHIRGENRSEQARKHAQQTFGETIGKSFDDAVARFSF PAWMLQLLRKTRDRIIHLLITLWERLF >gi|296918670|gb|GG773030.1| GENE 2 555 - 731 64 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300976683|ref|ZP_07173540.1| ## NR: gi|300976683|ref|ZP_07173540.1| hypothetical protein HMPREF9531_01338 [Escherichia coli MS 45-1] hypothetical protein HMPREF9531_01338 [Escherichia coli MS 45-1] # 1 58 18 75 75 107 93.0 4e-22 MQQKKYSFNYLIFNDDFIKRRILVNPATHPVGVSVSEQTLPQCDQQVDNAVPGFAQKL Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:21:59 2011 Seq name: gi|296918669|gb|GG773031.1| Escherichia coli MS 110-3 genomic scaffold Scfld436, whole genome shotgun sequence Length of sequence - 32597 bp Number of predicted genes - 38, with homology - 38 Number of transcription units - 19, operones - 6 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 595 - 654 4.8 1 1 Tu 1 . + CDS 674 - 1291 110 ## ECS88_4651 hypothetical protein + Prom 1829 - 1888 5.3 2 2 Tu 1 . + CDS 1999 - 2166 85 ## EcSMS35_3200 hypothetical protein + Term 2369 - 2412 -0.9 + Prom 2579 - 2638 3.5 3 3 Tu 1 . + CDS 2777 - 3508 235 ## ECS88_4652 hypothetical protein + Term 3547 - 3590 3.1 + Prom 3565 - 3624 2.3 4 4 Op 1 . + CDS 3855 - 4430 546 ## ECS88_4653 hypothetical protein 5 4 Op 2 . + CDS 4499 - 4732 270 ## COG3311 Predicted transcriptional regulator + Term 4895 - 4935 1.2 - Term 4725 - 4766 3.8 6 5 Tu 1 . - CDS 5007 - 5297 198 ## COG2963 Transposase and inactivated derivatives + Prom 5335 - 5394 2.2 7 6 Tu 1 . + CDS 5538 - 6545 744 ## COG0841 Cation/multidrug efflux pump + Term 6553 - 6610 5.9 8 7 Tu 1 . - CDS 6560 - 6808 80 ## gi|194437735|ref|ZP_03069830.1| hypothetical protein EC1011_0171 - Prom 7021 - 7080 7.8 + Prom 6985 - 7044 6.8 9 8 Tu 1 . + CDS 7288 - 7497 139 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 7931 - 7972 6.3 10 9 Op 1 . - CDS 7990 - 8535 528 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 11 9 Op 2 . - CDS 8580 - 9731 861 ## COG0192 S-adenosylmethionine synthetase - Prom 9762 - 9821 3.1 12 10 Op 1 . - CDS 9860 - 10915 923 ## COG2207 AraC-type DNA-binding domain-containing proteins 13 10 Op 2 . - CDS 10932 - 12194 584 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 14 10 Op 3 . - CDS 12234 - 12422 94 ## c4544 hypothetical protein - Prom 12527 - 12586 2.1 - Term 12531 - 12566 2.0 15 11 Op 1 2/0.000 - CDS 12744 - 13226 177 ## COG3344 Retron-type reverse transcriptase 16 11 Op 2 . - CDS 13293 - 13832 348 ## COG3344 Retron-type reverse transcriptase - Prom 13955 - 14014 8.7 - Term 14286 - 14321 4.1 17 12 Tu 1 . - CDS 14361 - 15299 724 ## ECS88_4670 hypothetical protein - Prom 15324 - 15383 3.3 18 13 Op 1 11/0.000 - CDS 15436 - 16353 761 ## COG1180 Pyruvate-formate lyase-activating enzyme - Prom 16389 - 16448 3.6 - Term 16414 - 16455 8.1 19 13 Op 2 . - CDS 16462 - 19014 2184 ## COG1882 Pyruvate-formate lyase 20 13 Op 3 . - CDS 19063 - 19638 249 ## COG0693 Putative intracellular protease/amidase 21 13 Op 4 . - CDS 19649 - 19903 175 ## ECS88_4674 hypothetical protein 22 13 Op 5 . - CDS 19972 - 21489 893 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 23 13 Op 6 4/0.000 - CDS 21550 - 22335 1010 ## COG4816 Ethanolamine utilization protein 24 13 Op 7 . - CDS 22357 - 22638 290 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 25 13 Op 8 . - CDS 22716 - 22886 63 ## gi|300949381|ref|ZP_07163390.1| hypothetical protein HMPREF9541_02834 26 13 Op 9 . - CDS 22923 - 24074 726 ## COG0282 Acetate kinase 27 13 Op 10 2/0.000 - CDS 24148 - 24645 336 ## COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 28 13 Op 11 . - CDS 24673 - 24942 253 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein 29 13 Op 12 . - CDS 24954 - 25658 509 ## ECS88_4682 hypothetical protein 30 13 Op 13 1/0.333 - CDS 25663 - 26421 487 ## COG4820 Ethanolamine utilization protein, possible chaperonin 31 13 Op 14 . - CDS 26476 - 27162 756 ## COG4869 Propanediol utilization protein - Prom 27182 - 27241 1.7 32 14 Tu 1 . - CDS 27302 - 28273 840 ## COG1454 Alcohol dehydrogenase, class IV - Prom 28399 - 28458 3.4 + Prom 28685 - 28744 2.2 33 15 Op 1 . + CDS 28869 - 29270 225 ## ECS88_4686 hypothetical protein + Prom 29274 - 29333 4.4 34 15 Op 2 . + CDS 29366 - 29599 281 ## ECS88_4687 hypothetical protein 35 16 Tu 1 . - CDS 29652 - 29843 136 ## ECS88_4688 hypothetical protein - Prom 29940 - 29999 2.4 + Prom 30214 - 30273 6.3 36 17 Tu 1 . + CDS 30523 - 30873 223 ## COG2831 Hemolysin activation/secretion protein + Term 30937 - 30978 5.4 37 18 Tu 1 . + CDS 30996 - 31343 335 ## COG3515 Uncharacterized protein conserved in bacteria + Prom 31778 - 31837 5.0 38 19 Tu 1 . + CDS 31972 - 32596 280 ## ECS88_4693 hypothetical protein Predicted protein(s) >gi|296918669|gb|GG773031.1| GENE 1 674 - 1291 110 205 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4651 NR:ns ## KEGG: ECS88_4651 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 205 203 407 407 400 100.0 1e-110 MVVFNYTKINKQLEKVLGGIARKQTSERNKGGLYTRIKKESDFLSMDRFMVEIENIIRPE RFPTSIYPVFSHSFIERELPLLNLARSQYKRAISKRVANSIFYTLQKTNVALWLYLEMFA LVAFIKLYTGKGFEFIKNMCVFIDYEKGIIKSTHEELLGEIKRNIQVNLKVNPDNFPELI DIYNSCFSENILSYDIQDGNFKWRS >gi|296918669|gb|GG773031.1| GENE 2 1999 - 2166 85 55 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_3200 NR:ns ## KEGG: EcSMS35_3200 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 17 55 1 39 39 74 97.0 1e-12 MIFYFSEVTFNLFLVFVFLVVNLRQVSLCKNANPAEITWRDLLCAYDDFVKWFYG >gi|296918669|gb|GG773031.1| GENE 3 2777 - 3508 235 243 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4652 NR:ns ## KEGG: ECS88_4652 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 243 1 243 243 488 100.0 1e-136 MNQPIHNAYWLSRFESILNSALAQHRAVSLIRVDLRFPEYMPATIMDTDLDSAVISRFFA SLKAKIQAYQRHKRRANKRVRATTLRYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFT VPSSLATLIQLAWCSALHLEPWQGNGLVHFSRRTPFRKPTSSDARPSSDDTPLSGGCSET RKASDKKSGGSAVLWVKRGDVEAMQKARNRASYLVKYETKQHDGSGQRNYGCSRGVGRLL DGR >gi|296918669|gb|GG773031.1| GENE 4 3855 - 4430 546 191 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4653 NR:ns ## KEGG: ECS88_4653 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 191 64 254 254 408 100.0 1e-113 MNAIPYFDYSLAPFWPSYQNKVVGVLERALREQSGSRIRRILLRLPCEYDNTFNSRTTWF GMDFIETVSALMNATPGRDLCWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNV LGFASPGEAKQYQKQITRDVVLDSRSPDCENILKELIWAFSDFARDRRGVCDPEARCLAG NPGYPGSAGPF >gi|296918669|gb|GG773031.1| GENE 5 4499 - 4732 270 77 aa, chain + ## HITS:1 COG:Z1188 KEGG:ns NR:ns ## COG: Z1188 COG3311 # Protein_GI_number: 15800709 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 1 64 1 64 65 120 95.0 4e-28 MLTTTSHDSVLLRADDPLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSE VEQWMQQRIEESRGAAA >gi|296918669|gb|GG773031.1| GENE 6 5007 - 5297 198 96 aa, chain - ## HITS:1 COG:yi21 KEGG:ns NR:ns ## COG: yi21 COG2963 # Protein_GI_number: 16132093 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 89 16 104 136 149 98.0 2e-36 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA VAAGEQVVPASELAAAMKQIKELQRLLNKTPDVSRL >gi|296918669|gb|GG773031.1| GENE 7 5538 - 6545 744 335 aa, chain + ## HITS:1 COG:PA0426 KEGG:ns NR:ns ## COG: PA0426 COG0841 # Protein_GI_number: 15595623 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Pseudomonas aeruginosa # 2 334 715 1046 1046 484 70.0 1e-136 MVRPNGMNDEPQFQILIDDEKVQAFKLSMSDVDNIMSAAWGSMYVNDFNDRGRVKKVYIQ GEPGSRISPQDFDKWYVRNSDGDMVSFASFATGKWIYGSPKLEQYNGISAVEILGEPAPG YSSGDAMKAIEDIAARLPEGFHISWTGLSFEERLSGSQAPALYALSLLIVFLCLAALYES WSIPFSVMLVVPLGVLGAVCATLLRGLGNDVFFQVGLLTTIGLSAKNAILIVEFARELHE KEGLSIKEAAVEAARVRLRPIIMTSLAFVMGVIPLAVSTGASSGSKHAIGTGVVGGMITA TILAIFYIPLFYMLIAGFFSRRNKKSSDKTEAEQS >gi|296918669|gb|GG773031.1| GENE 8 6560 - 6808 80 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|194437735|ref|ZP_03069830.1| ## NR: gi|194437735|ref|ZP_03069830.1| hypothetical protein EC1011_0171 [Escherichia coli 101-1] predicted protein [Escherichia sp. 3_2_53FAA] hypothetical protein EC1011_0171 [Escherichia coli 101-1] predicted protein [Escherichia sp. 3_2_53FAA] # 35 82 1 48 48 83 97.0 6e-15 MAPRVQPARAAIISSVVFEKPVSQKQNSATSRICLRVSSAANFVCRTTVEISIDILFQEI SLGHLVPTQQPFTQAQYVVYCT >gi|296918669|gb|GG773031.1| GENE 9 7288 - 7497 139 69 aa, chain + ## HITS:1 COG:ECs5044 KEGG:ns NR:ns ## COG: ECs5044 COG2207 # Protein_GI_number: 15834298 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 11 60 7 56 107 56 46.0 1e-08 MNATIKNSSDINEFAKWIDENLEVELSINIEAKKAGYSKWYLQRLFKHIIGISIGRYINK CSRRTTFYY >gi|296918669|gb|GG773031.1| GENE 10 7990 - 8535 528 181 aa, chain - ## HITS:1 COG:all0867 KEGG:ns NR:ns ## COG: all0867 COG4577 # Protein_GI_number: 17228362 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Nostoc sp. PCC 7120 # 5 109 4 109 114 67 40.0 1e-11 MSGKSLGLIETVGMSAAVEAADAAMKSANVSLVGYELTKGGGMVTVKLEGEVGAINAAVA AAISAASRVGEVYAHKVIARTAQHIEQIIHSKVTAGVAEPQPEVPAAQPTLQAENAPSQT FPVVNLDTSISASCMDVTDETLKSVEQHQPVKPSIENTKPTKSDVPQEAAKKGPRSSGKK K >gi|296918669|gb|GG773031.1| GENE 11 8580 - 9731 861 383 aa, chain - ## HITS:1 COG:STM3090 KEGG:ns NR:ns ## COG: STM3090 COG0192 # Protein_GI_number: 16766391 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Salmonella typhimurium LT2 # 1 382 1 382 384 512 63.0 1e-145 MNDYLFTSESVAEGHPDKMADQISDAILDAILLQDPWGKVACECLVKTGATIVAGEISTH AAVDIEKIVRNTIKEIGYDHSRLGFDGNTCCVLNILGKQSANIADGIRGHSMEELGAGDQ GITFGYACDETSELMPATLVYAHRLMERQAQLRKSQRLPFLLPDAKSQVTLRYQDNRVHS VDTVVVSTQHSPDVSLDALREAVIEEIVKPVMPSHWLTPQTRFLVNPVGSFVIGGPVGDC GLTGRKIIVDTYGGAACHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLASRCEVQLG WAIGLPRPVSVRINTFGTQTVSSEALLRGVNSHFDLSVFGIITTLDLLVPRYRKTACYGH FGRDSFPWEVTDKAALLYEDVGR >gi|296918669|gb|GG773031.1| GENE 12 9860 - 10915 923 351 aa, chain - ## HITS:1 COG:ECs4883 KEGG:ns NR:ns ## COG: ECs4883 COG2207 # Protein_GI_number: 15834137 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 219 343 145 269 283 82 33.0 1e-15 MFTIVIVEDEPIELESLRQIISQCVENAAIHEASTGKKAIHLIDQLSQIDMILVDINIPL PNGKQVIEYLKKKNSDTKIIVITANDDFDIVRSMYNLKVDDYLLKPVKKCILTDTIKKTL AFDEGENEKSRALKQKVFAMIDDCDYTQWHNFIFDTLNGACPVDMIEEDKRKDVIDFLEI VSQYMTAKGEKLMPTNRKVAALIKDINQYGMMESRYFRIMISLLTISEELFDYALKGYTG NIDFIERAKFHIEKNILRNLTLDDVAAKSFVSACYLSRTFKKITGFGFSNYIATRKITIA KSLLRFSDLQVNTIALELAYQDSNYFCRIFKKDTGMTPSDYRKVVSPGITR >gi|296918669|gb|GG773031.1| GENE 13 10932 - 12194 584 420 aa, chain - ## HITS:1 COG:SP0662 KEGG:ns NR:ns ## COG: SP0662 COG2972 # Protein_GI_number: 15900563 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Streptococcus pneumoniae TIGR4 # 189 413 334 555 563 119 32.0 1e-26 MIMFLKMQAESMKNKYKLNEFLDVKRLQTLQDNFSKSMMIALVVVDENGIPVTKPSVFSD FCMRSRLNPTLAHHCYESDNAGGRAAMHARKPVVYRCHCGFVEFAVPIMINDHYLGAFIS GQVKVEEEKEQSISYILNNNDVWKDNPWLINLHQNTRRMPYERFESTASTLLHVSSYLVE QAHTNNIQRELRKKDLALANELRKRVEIERSLHEAEFKALSYQINPHFLFNVLNTIGRLA FLEDAQRTETMVHDFSDMMRYLLRKNSHGLITLRNEINYVNNYMSIQKVRMRDRFDYLCD IPEKYLDVVCPFLILQPLVENFFNYVVEPRDSNSHLLIRATDDGLNVIIEVTDNGDGIAP DTINRILSGDQKLQKGSIGINNIKNRLKLLFGESYGLEIMSPNKPRMGTTIKLRFPMQEA >gi|296918669|gb|GG773031.1| GENE 14 12234 - 12422 94 62 aa, chain - ## HITS:1 COG:no KEGG:c4544 NR:ns ## KEGG: c4544 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 62 1 62 62 100 100.0 2e-20 MWGFLTDCLVIPFVSPVTGVCIVAVLVYVSLCICTGSARFEKEYPLQITEALLSEPELFL LL >gi|296918669|gb|GG773031.1| GENE 15 12744 - 13226 177 160 aa, chain - ## HITS:1 COG:BH0039 KEGG:ns NR:ns ## COG: BH0039 COG3344 # Protein_GI_number: 15612602 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Bacillus halodurans # 3 159 189 347 418 166 50.0 1e-41 MLQGGPLSPLLSNILLDELDKELERRGHSFCRYADDCNIYVSSRKAGDHLLKNIRAFVEN KLKVNEKKSAVARPWDRKFLGYSVTWHKQAKLKIALTSVNRLKEKVHSLTTGNRSKSVKA TINALTPVLCGWISYFRLTEVRGVLEELDGWIKRKLRCLL >gi|296918669|gb|GG773031.1| GENE 16 13293 - 13832 348 179 aa, chain - ## HITS:1 COG:SMb21167 KEGG:ns NR:ns ## COG: SMb21167 COG3344 # Protein_GI_number: 16264581 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Sinorhizobium meliloti # 3 179 1 207 453 140 40.0 2e-33 MMINEAQAQATATSGRGDGQYPSGLHDGAEISTAAGGQTKAEVPLTMEAVITRENLMLAY QRVVENKGTAGVDNLSVAELKPWLKKNWRSVRQALIDGNYQPRTIRRMDIPKPDGGVRTS GIPTVVDRLIQQAVQQAQRYIRGGKRWVVDMDLEKFFDRVDHRLLMTRLARTIKDRRVL >gi|296918669|gb|GG773031.1| GENE 17 14361 - 15299 724 312 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4670 NR:ns ## KEGG: ECS88_4670 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 312 1 301 301 474 96.0 1e-132 MNSLDIVVAFGGGIFGAAVGALAAFEFVGLLVIAMTVVQIITGASSDFITFPFGLFGPHT GGFAAGVGGGGGGGGGGGGATAYAAKKGKLGSGRDITAGLSGLAAYDVLLVGGVFGAVGY IIAWGLNQIPAFPSGNAWTDTVALTVVISGVVSRLVFGKTGLFGKPEQGIRHCYPPQDKC WIPYHSRIPQLSVLGLGIGLMAGFLGLKFGGNGALLAFGISAFSLIFLHFNTQVPVSHHI SLPAALVAVPSGSLIWAAIVGIICAILGELMSRIFLIHGDTHIDPPAMVITIMTTMINLL ATIGLFTLVPLF >gi|296918669|gb|GG773031.1| GENE 18 15436 - 16353 761 305 aa, chain - ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 7 305 3 300 302 244 41.0 2e-64 MNKVEYETEGVIFNIQRYSLHDGPGIRTIPFFKGCPLSCKWCSNPESQRHSPELLFKKND CIRCGKCIDACPQQALSTTNAWFINRDRCIQCGKCTEICPTRALEMKGKRMSVTAVMREL EKEENLYRRSGGGITLSGGEPLAQPEFARELLKACKAKGWHTAIETSGFTTKAVIDEVFP YVDLALTDIKAIDPEIHERNTGVNNRVILENLLRISFLTKVVVRIPVIPGVNDNSQEIHN IAEFARLMQNVDTIHLLPYHSFGENKYNLLGRQYPMGDTKSIEEAQMAELKAMVESLGFN CHIGG >gi|296918669|gb|GG773031.1| GENE 19 16462 - 19014 2184 850 aa, chain - ## HITS:1 COG:pflD KEGG:ns NR:ns ## COG: pflD COG1882 # Protein_GI_number: 16131789 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 10 849 2 765 765 557 37.0 1e-158 MLEKGFSNPTDRVVRLRNMILTAKPYVESERAVLATEAYKETEQLPAIMRRAKVVEKIFN QLPVTIRPDELIVGAVTINPRSTEICPEFSYDWVEKEFETMEHRIADPFVIPKKTAQELH EAFKYWPGKTTSALAASYMSEGTKESMASGVFTVGNYFFGGVGHVSVDYGKVLKIGFRGI INEVSRALESLDRTEPGYIKKEQFYNAVLISYNAAIRFAHRYAEEASRLAQQESNPTRKR ELEQIAQNCTRVPEYGATTFWEACQTFWFIQSMLQIESSGHSISPGRFDQYMYPYLESDK SISREFAQELVDCCWIKLNDINKTRDEVSAQAFAGYAVFQNLCCGGQTEDGRDATNDLSY MCMEATAHVRLPQPSFSIRVWQGTPDEFLYRACELVRMGLGVPAMYNDEVIIPALQNRGI SLRDARDYCIIGCVEPQAPHRTEGWHDAAFFNVAKVLEITLNNGRVGNKQLGPVTGELTQ FTSMEDFYTAFQKQMAHFVHQLVEACNSVDIAHGERCPLPFLSALVDDCIGRGKSLQEGG AIYNFTGPQAFGVADTGDSVYAIQKQVFEDRKLSLSELKSALDANFGYPVGANPHTPAAK SSLNEQDIYDVVKRIIEQHGALDPAAIKNEVYRQLTSGSAAPVQSGTMSRHEEIRRILEN TPCFGNDIDDVDLVARKCALIYCQEVEKYTNPRGGQFQAGIYPVSANVLFGKDVAALPDG RLAKEPLADGVSPRQGKDTLGPTAAANSVAKLDHFIASNGTLYNQKFLPSSLAGENGLRN FSGLIRHYFDKKGMHVQFNVIDRNTLIEAQKNPEQHQDLVVRVAGYSAQWVVLAKEVQDD IISRTEQQLS >gi|296918669|gb|GG773031.1| GENE 20 19063 - 19638 249 191 aa, chain - ## HITS:1 COG:PA4336 KEGG:ns NR:ns ## COG: PA4336 COG0693 # Protein_GI_number: 15599532 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Pseudomonas aeruginosa # 2 191 5 194 194 222 54.0 3e-58 MKKILLITGDFSEDYEVMVPWQALNMLGFRVDVVCPGKRTGEFIKTAIHDFEGDQTYTEK PGHLFRLTASFDDIRLQEYSGVYISGGRSSEYLRLNKSVLDIVHYAMNLTLPVAAICHGP QILAAAGVLKGRKLTGYFTVKPEVEMAGGQWVTAADDEAIVDGNLITATTWMGHPAILRH FITQMGTSIIH >gi|296918669|gb|GG773031.1| GENE 21 19649 - 19903 175 84 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4674 NR:ns ## KEGG: ECS88_4674 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 84 16 99 99 164 100.0 1e-39 MLKRRMPGEFRSRLDLIRIDAIGLLILPVPDLYFYADVASKSANVVVSEIFGSCPQHITT LAIFGEVAAVHEAMRIIEEDDNQF >gi|296918669|gb|GG773031.1| GENE 22 19972 - 21489 893 505 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 33 505 2 474 477 348 40 2e-95 MNDIEIAQAVSTILSKFTKATPDEAPATSEAARVDGLDEIVAKALAQHSSVRDASAISQV AKVANASTGAFDTMDEAISAAVLAQVQYRHCSMQDRASFINGIRDVFLQEDVLCALSRMA VEETGMGNYEDKLIKNRVAALKTPGIEDLTTSAVSGDGGLTLIEYSAFGVIGSITPTTNP TETIINNSIGMLAAGNTVVFSPHPRSRKVSLYAVELINNKLAQLGAPANMVVTVTKPSID NTNVLINDPRINMLVATGGPAIVKTVMSSGKKAIGAGAGNPPAVVDETADIEKAARDIIK GCSFDNNLPCVAEKEVIVVNQVADYLIHCMKKSGAYLLCDKKLSQQLQSLVLNEKGTGPN TAFVGKDARYILQQLGIQVGDDIKVILIEAEKTHPFVVHELMMPVLPVVRVDNVDEAIEL AVKVEHGNRHTAVMHSTNVEKLTKMARLIQTTIFVKNGPSYAGLGVGGEGHATFTIAGPT GEGLTSARSFARRRRCVMVEALNIR >gi|296918669|gb|GG773031.1| GENE 23 21550 - 22335 1010 261 aa, chain - ## HITS:1 COG:lin1116 KEGG:ns NR:ns ## COG: lin1116 COG4816 # Protein_GI_number: 16800185 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Listeria innocua # 2 248 4 255 267 286 62.0 2e-77 MRDNLVEQIISDVMNKQTDISPEAKTAANFAGCGITEFVGTALGHTIGLVIANVDNQLHE VMNIDKKYRSIGILGARTGAGPQIFAADEAIKATNSEIISIELARDTEGGGGHGCLIIFG ASDVSDVRRAVEVALSEIERTMGDVYGSSAGHLEFQYTARASYALNKALGAPIGKSFGMT CASPAAIGLVIADAAAKSAVIDPVGYASPSQGTSFSNEVIFTFSGDSGAVRQAVIAAREV GLQLLSTLDPVEIKSTTTPYI >gi|296918669|gb|GG773031.1| GENE 24 22357 - 22638 290 93 aa, chain - ## HITS:1 COG:STM2038 KEGG:ns NR:ns ## COG: STM2038 COG4577 # Protein_GI_number: 16765368 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 92 1 92 94 108 84.0 3e-24 MQQEALGMVETKGLVSAIEAADTMVKSANVTLVGYEKIGSGLVTVMVRGDVGAVKAATDA GSAAASKVGELVSVHVIPRPHIEVEKILPKAIG >gi|296918669|gb|GG773031.1| GENE 25 22716 - 22886 63 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300949381|ref|ZP_07163390.1| ## NR: gi|300949381|ref|ZP_07163390.1| hypothetical protein HMPREF9541_02834 [Escherichia coli MS 116-1] hypothetical protein HMPREF9541_02834 [Escherichia coli MS 116-1] # 1 56 1 56 56 97 98.0 4e-19 MIAIQSGAILQGNLNADLLLQTSGGFYCQLRECKSKIVPLTRKTFCLNNLSIMIIK >gi|296918669|gb|GG773031.1| GENE 26 22923 - 24074 726 383 aa, chain - ## HITS:1 COG:STM3242 KEGG:ns NR:ns ## COG: STM3242 COG0282 # Protein_GI_number: 16766541 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Salmonella typhimurium LT2 # 1 380 17 393 402 399 53.0 1e-111 MKFSVIPQDADQPLLSGLAERLGIDHAVITFKDRDGHKSTVALDDASHQHALKVLFAKLD EQQLLEAINAVGHRVAHGGSDFKRSVLVTDDVIEKVRALSVLAPLHNPANLIGIEAARAL LPALPHIAVFDTAFHQTLSPAAYTYAIPLEFQQDYMVRRYGFHGTSHRYIAAEALASLDL DPADHGIVIAHLGNGSSLCAVQNGTSIDTSMGMTPLEGLVMGTRCGDLDFGVVAYLAKRT GQTFDTLYKMLNNQSGLMGISGLSSDCRTLQQARDEGHERAALAIDVLVHRLARHIGGHV TSLKRFDALIFTGGIGENSALIRELTVQRLQALGLELDKERNQQLFGGRSGLISKTDTTK IAVIPTNEEKMIAIDAAEIARTA >gi|296918669|gb|GG773031.1| GENE 27 24148 - 24645 336 165 aa, chain - ## HITS:1 COG:STM2050_2 KEGG:ns NR:ns ## COG: STM2050_2 COG3193 # Protein_GI_number: 16765380 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol # Organism: Salmonella typhimurium LT2 # 25 156 16 149 153 101 50.0 6e-22 MSANEASLDNWINEAIATQLPELRMSLSLEDSELLAKLVREIAQSSNVSIVFSLVDACGQ QRFFFSMDNALLVSHTLAPQKAWTAVALKMPTHELATLVQPGGDLYGLEKEKDICCFGGG FPCWSGRRLLGGIGISGGSVEEDMLIARQAMAQFSVLRYPLTTTR >gi|296918669|gb|GG773031.1| GENE 28 24673 - 24942 253 89 aa, chain - ## HITS:1 COG:lin1148 KEGG:ns NR:ns ## COG: lin1148 COG4576 # Protein_GI_number: 16800217 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Listeria innocua # 1 89 1 89 89 70 46.0 6e-13 MYLAKVTGALVSTTKHASLNGSKLLIVARLDENYQPTVHAQVAVDTVGAGNGEIVIITTG SSARMSNNKDHSVIDAAVVGIVDSLELNG >gi|296918669|gb|GG773031.1| GENE 29 24954 - 25658 509 234 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4682 NR:ns ## KEGG: ECS88_4682 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 234 8 241 241 441 100.0 1e-122 MDNQTLSQLLDRVIAEVLAQSVAQKNVCVVVTGEDISSLPETLNCLEALELAGYQLWVNF SHSASQSALKSVCMDALIQRGSRAGFDRSPPHYEVLYLPALSVNSMSKIALGIRDNLACE TVFQTLQHRKQIIATLHQQCVDSELPMPLLSCLEGYAQVLESYGITLFGKRAAHVKSVQG SQSTLTVAGKKRLITQSDIRLLTIGTVLRIESDTLITPAARDEIQRRNLTVIHG >gi|296918669|gb|GG773031.1| GENE 30 25663 - 26421 487 252 aa, chain - ## HITS:1 COG:FN1783 KEGG:ns NR:ns ## COG: FN1783 COG4820 # Protein_GI_number: 19705088 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin # Organism: Fusobacterium nucleatum # 11 247 32 269 274 226 49.0 4e-59 MSALLRRVEGGGDLGTANIAIVVLDEDNQPVAGVMYPSNVVKDGVVVDYLTASRVVARLK QILEQKQGCTLERAAIAVPPGISEGNTKVIVNVVELAGFIVTQVLDEPVAAASALNIKNG AVVDVGGGTTGMSILKSGKVTFSADEPTGGSHMKLVIAGALGLPYAEAEEMKKNGQEAQV FTLVLPVAQKMASLVSGWFATQQVKNIYLVGGASSFSQFANVFSKQTGKNVIPSAEPLLV TPLGIAMNADQG >gi|296918669|gb|GG773031.1| GENE 31 26476 - 27162 756 228 aa, chain - ## HITS:1 COG:TM0375 KEGG:ns NR:ns ## COG: TM0375 COG4869 # Protein_GI_number: 15643143 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol utilization protein # Organism: Thermotoga maritima # 37 218 23 205 210 186 54.0 3e-47 MNYTEQQAEWITQQILQELATSKKTAAPAAAPVALNIPVGVSNRHVHLCREDMDILFGYG STLTRSKALKQPGQYAAEEMVTLRGPKGELNKVRVLGPLRNATQVEISVADGFALGTKAP VRMSGDLLDSPGIEIIGPKGRVVKHNGMIVAWRHIHISPEEAELHGLHDGMEIDVQTNGP RGGVLSHVVVRVTADAVLELHIDMEEANGVGLRNGDTVRGIKQAARHG >gi|296918669|gb|GG773031.1| GENE 32 27302 - 28273 840 323 aa, chain - ## HITS:1 COG:lin1135 KEGG:ns NR:ns ## COG: lin1135 COG1454 # Protein_GI_number: 16800204 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Listeria innocua # 8 319 57 375 379 259 41.0 5e-69 MPEASVCIFGEVTPDPDIDILTSGAARFKAFKPDVIIALGGGSSLDAAKGIKVTLEEYFG DHQIDLIAIPTTSGSGSEVTSYAIISDPQNGRKYPLISGQLVPEIAILDPNLVLTAPRHV AVDTGMDVLTHAIEAFVSTGSNDFSDALAEKAIALTWRYLPQVFNDEKDIAARTHMHNAS CMAGMAFNSAGLGLVHGMAHAIGGMLHIPHGKINAMLLPIVIDFNSKRASTETRDRYHRC AQIIGIDHAVPEQAIALMTQEIRQINRHFCIPVTLSELGIDRAKIIELRSALVNSTLADG CTASNPRQVTTHDVEGLIDLITG >gi|296918669|gb|GG773031.1| GENE 33 28869 - 29270 225 133 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4686 NR:ns ## KEGG: ECS88_4686 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 133 1 133 133 264 100.0 8e-70 MLREEWDISQKNVVFNDKRFGCVYSLKASLSSVPDTYRYHLSHRIRRVVGNENTSLPYQQ VAREVKAPRERLKYALEAGLLVTALDGLFWSGSQRIAADVLRLRQSGMPVVTTTVEVHDN LTGTTRKIPAYHL >gi|296918669|gb|GG773031.1| GENE 34 29366 - 29599 281 77 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4687 NR:ns ## KEGG: ECS88_4687 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 77 26 102 102 150 100.0 2e-35 MARSDYDIINLSLEHELNEWLAERGYAGLAYNRNRVVEVVTRKLQDSFYINVSWDALNTA YNEHPEWFSGFVSGDEN >gi|296918669|gb|GG773031.1| GENE 35 29652 - 29843 136 63 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4688 NR:ns ## KEGG: ECS88_4688 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 63 1 63 63 115 100.0 6e-25 MSEDVPLPKVNQRYKDDHGALATVTSVEETRVVFMREGYPHPCMRPMYNFLGKFKPDPRE ETE >gi|296918669|gb|GG773031.1| GENE 36 30523 - 30873 223 116 aa, chain + ## HITS:1 COG:Z1200 KEGG:ns NR:ns ## COG: Z1200 COG2831 # Protein_GI_number: 15800721 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Hemolysin activation/secretion protein # Organism: Escherichia coli O157:H7 EDL933 # 1 116 1 116 348 220 97.0 4e-58 MSALLSPLSLQAADVRRSGDEAFIIQQQRQEALEQQLMPSAPDVRLSAPGSFARKINFPV ETPCFQIKQTELEGADALPHWLPLQKIANGAVGHCLGAKGINLLMSTLQNRLVDHG >gi|296918669|gb|GG773031.1| GENE 37 30996 - 31343 335 115 aa, chain + ## HITS:1 COG:YPO1489 KEGG:ns NR:ns ## COG: YPO1489 COG3515 # Protein_GI_number: 16121762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 5 103 345 445 455 70 41.0 7e-13 MVDNWQKSVRSRALPEEAMTGWNEGMTRLQQLAERLNRLDEQRGKYMTVSELRTEVFGIM QAFNRHIPAEEQLRRYDEARNQNGSEQQQKQAEMALNQLINRYQVEHAGKPERQP >gi|296918669|gb|GG773031.1| GENE 38 31972 - 32596 280 208 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4693 NR:ns ## KEGG: ECS88_4693 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 198 131 328 532 378 99.0 1e-103 MSSSSIKPVVDYYINGDNLYEPLSIPPYGVRTYKDTFQLIIYKEGIRYNKPAIYFGKIQS NIRLEINSNRYYLTFLARKKGTKQAYKLEIDASEWDESKKSFFCSEYEKQRAEANKYYNG LKDKRKATKYLNIFFFGFPDECDSFLFKTSCFKLIYIVFLDDFDVTYNDKNYSIEKEQLI RDEINKEHLTDHQNRINLAEVAEVAEVA Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:22:51 2011 Seq name: gi|296918668|gb|GG773032.1| Escherichia coli MS 110-3 genomic scaffold Scfld463, whole genome shotgun sequence Length of sequence - 868 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 867 594 ## COG5511 Bacteriophage capsid protein Predicted protein(s) >gi|296918668|gb|GG773032.1| GENE 1 3 - 867 594 288 aa, chain + ## HITS:1 COG:ECs1107 KEGG:ns NR:ns ## COG: ECs1107 COG5511 # Protein_GI_number: 15830361 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Escherichia coli O157:H7 # 1 288 6 293 530 558 98.0 1e-159 VLIDVNGVPLRESLSYNGGGAGFGGQMAEWLPPAQSADAALLPALRLGNARADDLVRNNG IAANAVALHKDHIVGHMFLISYRPNWRWLGMRETAAKSFVDEVEAAWSEYAEGMFGEIDV EGKRTFTEFIREGVGVHAFNGEIFVQPVWDTETTQLFRTRFKAVSPKRVDTPGHGMGNRF LRAGVEVDRYGRAVAYHICEDDFPFSGSGRWERIPRELPTGRPAMLHIFEPVEDGQTRGA NQFYSVMERLKMLDSLQATQLQSAIVKAMYAATIESELDTEKAFEYIA Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:27:43 2011 Seq name: gi|296918667|gb|GG773033.1| Escherichia coli MS 110-3 genomic scaffold Scfld465, whole genome shotgun sequence Length of sequence - 750932 bp Number of predicted genes - 710, with homology - 702 Number of transcription units - 395, operones - 146 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . + CDS 1473 - 2936 810 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 3 1 Op 3 . + CDS 2998 - 4437 1415 ## COG0534 Na+-driven multidrug efflux pump 4 1 Op 4 7/0.063 + CDS 4434 - 8801 1487 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 5 1 Op 5 . + CDS 8832 - 11291 1176 ## COG3321 Polyketide synthase modules and related proteins 6 1 Op 6 1/0.906 + CDS 11313 - 12818 612 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 7 1 Op 7 . + CDS 12811 - 13533 435 ## COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis 8 1 Op 8 . + CDS 13568 - 14080 394 ## COG4283 Uncharacterized conserved protein 9 1 Op 9 . + CDS 14110 - 14319 82 ## UTI89_C2205 hypothetical protein + Term 14328 - 14370 -0.9 - Term 14297 - 14332 0.4 10 2 Op 1 . - CDS 14382 - 15653 389 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 - Prom 15901 - 15960 5.2 - TRNA 15815 - 15890 87.1 # Asn GTT 0 0 - Term 15845 - 15883 -0.8 11 2 Op 2 . - CDS 15991 - 17445 927 ## COG0534 Na+-driven multidrug efflux pump - Prom 17657 - 17716 80.1 + TRNA 17639 - 17714 87.1 # Asn GTT 0 0 - Term 17595 - 17637 3.5 12 3 Tu 1 9/0.039 - CDS 17752 - 18630 761 ## COG0583 Transcriptional regulator - Prom 18735 - 18794 4.0 13 4 Tu 1 . - CDS 18804 - 19721 364 ## COG0583 Transcriptional regulator - Prom 19766 - 19825 1.5 + TRNA 20048 - 20123 87.1 # Asn GTT 0 0 - Term 20528 - 20564 4.2 14 5 Tu 1 . - CDS 20577 - 21293 697 ## COG0217 Uncharacterized conserved protein - Prom 21353 - 21412 9.9 - Term 21536 - 21580 8.9 15 6 Tu 1 . - CDS 21636 - 23090 1208 ## COG0775 Nucleoside phosphorylase - Prom 23148 - 23207 22.3 - Term 23158 - 23212 9.1 16 7 Tu 1 . - CDS 23232 - 24548 1013 ## COG0477 Permeases of the major facilitator superfamily - Prom 24574 - 24633 4.6 17 8 Tu 1 . + CDS 24863 - 25915 255 ## COG0859 ADP-heptose:LPS heptosyltransferase 18 9 Op 1 . - CDS 26043 - 26519 212 ## ECP_1951 hypothetical protein 19 9 Op 2 . - CDS 26532 - 27887 350 ## APECO1_1065 putative autotransporter 20 10 Op 1 . - CDS 28037 - 28207 65 ## ECIAI39_1068 hypothetical protein 21 10 Op 2 . - CDS 28134 - 28883 446 ## c2437 hypothetical protein - Prom 28914 - 28973 1.7 - Term 29486 - 29518 3.2 22 11 Tu 1 . - CDS 29530 - 31551 1694 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 31604 - 31663 9.7 23 12 Op 1 2/0.835 - CDS 31702 - 33279 1103 ## COG1021 Peptide arylation enzymes 24 12 Op 2 2/0.835 - CDS 33283 - 34071 134 ## COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis 25 12 Op 3 2/0.835 - CDS 34083 - 35183 585 ## COG4693 Oxidoreductase (NAD-binding), involved in siderophore biosynthesis 26 12 Op 4 7/0.063 - CDS 35180 - 44347 5684 ## COG3321 Polyketide synthase modules and related proteins - Prom 44551 - 44610 27.8 27 13 Tu 1 . - CDS 44788 - 50895 3456 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins - Prom 50958 - 51017 16.2 - Term 51007 - 51045 9.2 28 14 Tu 1 . - CDS 51080 - 52039 451 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 52114 - 52173 3.5 + Prom 52073 - 52132 3.0 29 15 Op 1 35/0.000 + CDS 52296 - 54008 194 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 30 15 Op 2 3/0.685 + CDS 53995 - 55797 221 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 31 15 Op 3 1/0.906 + CDS 55790 - 57070 939 ## COG0477 Permeases of the major facilitator superfamily 32 15 Op 4 . + CDS 57098 - 58402 1209 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Term 58530 - 58560 4.3 33 16 Op 1 12/0.016 - CDS 58596 - 59240 239 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 34 16 Op 2 1/0.906 - CDS 59183 - 59674 138 ## COG0582 Integrase - Prom 59828 - 59887 2.6 - TRNA 60055 - 60130 87.1 # Asn GTT 0 0 - Term 60085 - 60123 -0.8 35 17 Tu 1 . - CDS 60231 - 61028 408 ## COG3228 Uncharacterized protein conserved in bacteria - Prom 61152 - 61211 80.3 + TRNA 61122 - 61211 75.5 # Ser CGA 0 0 36 18 Tu 1 . + CDS 61658 - 62326 545 ## c2416 hypothetical protein + Prom 62410 - 62469 3.0 37 19 Op 1 . + CDS 62543 - 62761 161 ## COG3311 Predicted transcriptional regulator + Term 62776 - 62821 1.2 38 19 Op 2 . + CDS 62843 - 63133 125 ## ECP_1931 hypothetical protein 39 19 Op 3 . + CDS 63186 - 63482 268 ## ECP_1930 hypothetical protein + Term 63494 - 63537 6.5 40 20 Tu 1 . + CDS 63555 - 63797 279 ## ECP_1929 domain in histone-like proteins of HNS family; region: HNS; cl09251 + Term 63821 - 63868 -0.1 + Prom 63803 - 63862 4.5 41 21 Tu 1 . + CDS 63906 - 64256 99 ## c2412 hypothetical protein 42 22 Tu 1 . - CDS 64320 - 64724 521 ## COG2916 DNA-binding protein H-NS - Prom 64806 - 64865 8.4 - Term 64807 - 64855 -0.9 43 23 Tu 1 . - CDS 64883 - 65362 170 ## ECP_1926 hypothetical protein - Prom 65390 - 65449 6.6 + Prom 65331 - 65390 5.8 44 24 Tu 1 . + CDS 65536 - 66267 52 ## ECP_1925 hypothetical protein 45 25 Tu 1 . - CDS 66352 - 66933 293 ## ECP_1924 hypothetical protein - Prom 67049 - 67108 8.2 + Prom 67630 - 67689 8.9 46 26 Tu 1 . + CDS 67846 - 67959 70 ## SG2015 hypothetical protein + Prom 68065 - 68124 6.2 47 27 Op 1 . + CDS 68286 - 69248 483 ## ECP_1923 hypothetical protein 48 27 Op 2 . + CDS 69309 - 70481 387 ## c2405 hypothetical protein + Term 70522 - 70561 3.5 - Term 70505 - 70554 10.0 49 28 Op 1 . - CDS 70573 - 70758 179 ## E2348C_2102 hypothetical protein 50 28 Op 2 . - CDS 70769 - 70939 74 ## E2348C_2102 hypothetical protein 51 28 Op 3 . - CDS 70971 - 71444 234 ## ECP_1920 hypothetical protein - Prom 71620 - 71679 7.4 + Prom 71649 - 71708 5.5 52 29 Op 1 . + CDS 71877 - 72407 415 ## SeAg_B2077 hypothetical protein 53 29 Op 2 . + CDS 72418 - 72693 71 ## ECP_1918 hypothetical protein + Term 72715 - 72751 1.8 54 30 Tu 1 . - CDS 72753 - 73589 266 ## ECP_1917 hypothetical protein - Prom 73652 - 73711 5.0 55 31 Tu 1 . + CDS 73726 - 74235 -40 ## c2399 hypothetical protein + Term 74483 - 74531 -1.0 - Term 74249 - 74288 5.6 56 32 Tu 1 . - CDS 74367 - 74804 76 ## c2398 hypothetical protein - Prom 74925 - 74984 7.1 57 33 Tu 1 . - CDS 75347 - 76849 547 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member - Prom 77011 - 77070 8.4 + Prom 77410 - 77469 5.7 58 34 Tu 1 . + CDS 77495 - 77800 279 ## c2396 hypothetical protein + Term 77820 - 77854 -0.8 59 35 Op 1 . + CDS 78199 - 78756 305 ## ECP_1912 PilS N terminal; region: PilS; pfam08805 + Term 78758 - 78792 4.0 60 35 Op 2 . + CDS 78809 - 80272 760 ## ECP_1911 bacterial shufflon protein, N-terminal constant region; region: Shufflon_N; pfam04917 - Term 80306 - 80365 2.5 61 36 Tu 1 . - CDS 80387 - 82207 186 ## ECP_1910 hypothetical protein - Prom 82233 - 82292 5.3 62 37 Tu 1 . - CDS 82321 - 83352 275 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 - Term 84262 - 84299 4.1 63 38 Tu 1 . - CDS 84389 - 85039 399 ## COG3443 Predicted periplasmic or secreted protein - Prom 85076 - 85135 7.0 64 39 Op 1 13/0.016 - CDS 85297 - 85932 425 ## COG2717 Predicted membrane protein 65 39 Op 2 3/0.685 - CDS 85933 - 86880 938 ## COG2041 Sulfite oxidase and related enzymes - Prom 86905 - 86964 2.8 66 40 Tu 1 . - CDS 87046 - 87459 340 ## COG2351 Transthyretin-like protein - Prom 87504 - 87563 5.8 + Prom 87407 - 87466 4.8 67 41 Tu 1 . + CDS 87544 - 88263 205 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 88605 - 88664 1.9 68 42 Tu 1 . + CDS 88719 - 89621 413 ## COG0642 Signal transduction histidine kinase + Term 89687 - 89732 7.2 - Term 89675 - 89719 8.8 69 43 Tu 1 . - CDS 89755 - 90606 778 ## COG0693 Putative intracellular protease/amidase - Term 91116 - 91158 8.1 70 44 Tu 1 . - CDS 91202 - 92260 1006 ## COG3203 Outer membrane protein (porin) - Prom 92285 - 92344 6.2 + Prom 92617 - 92676 10.2 71 45 Op 1 . + CDS 92910 - 93191 162 ## c2382 hypothetical protein 72 45 Op 2 4/0.512 + CDS 93231 - 93881 571 ## COG1418 Predicted HD superfamily hydrolase + Term 93883 - 93919 1.2 + Prom 93927 - 93986 16.8 73 46 Op 1 6/0.118 + CDS 94009 - 95427 1468 ## COG0270 Site-specific DNA methylase 74 46 Op 2 . + CDS 95408 - 95878 465 ## COG3727 DNA G:T-mismatch repair endonuclease 75 47 Tu 1 . - CDS 95867 - 96787 970 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 96813 - 96872 5.0 + Prom 96805 - 96864 4.2 76 48 Op 1 3/0.685 + CDS 96966 - 97877 1256 ## COG2354 Uncharacterized protein conserved in bacteria 77 48 Op 2 2/0.835 + CDS 97956 - 98138 227 ## COG5475 Uncharacterized small protein + Prom 98227 - 98286 4.5 78 49 Tu 1 . + CDS 98327 - 100003 1237 ## COG2199 FOG: GGDEF domain + Term 100193 - 100223 -0.2 79 50 Tu 1 . - CDS 100000 - 100815 713 ## COG3769 Predicted hydrolase (HAD superfamily) 80 51 Tu 1 . - CDS 101195 - 101422 274 ## G2583_2404 hypothetical protein - Prom 101481 - 101540 4.2 + Prom 101395 - 101454 2.4 81 52 Tu 1 . + CDS 101585 - 101773 346 ## ECO111_2534 hypothetical protein + Term 101865 - 101910 4.0 82 53 Tu 1 . - CDS 101817 - 102440 418 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 102592 - 102651 2.7 83 54 Op 1 17/0.000 - CDS 102730 - 103515 682 ## COG1684 Flagellar biosynthesis pathway, component FliR 84 54 Op 2 16/0.000 - CDS 103524 - 103793 389 ## COG1987 Flagellar biosynthesis pathway, component FliQ 85 54 Op 3 6/0.118 - CDS 103803 - 104540 661 ## COG1338 Flagellar biosynthesis pathway, component FliP 86 54 Op 4 6/0.118 - CDS 104540 - 104905 310 ## COG3190 Flagellar biogenesis protein 87 54 Op 5 20/0.000 - CDS 104908 - 105321 544 ## COG1886 Flagellar motor switch/type III secretory pathway protein 88 54 Op 6 13/0.016 - CDS 105318 - 106322 1037 ## COG1868 Flagellar motor switch protein 89 54 Op 7 7/0.063 - CDS 106327 - 106791 449 ## COG1580 Flagellar basal body-associated protein - Prom 106824 - 106883 2.2 90 55 Op 1 8/0.039 - CDS 106896 - 108023 845 ## COG3144 Flagellar hook-length control protein 91 55 Op 2 12/0.016 - CDS 108020 - 108463 528 ## COG2882 Flagellar biosynthesis chaperone 92 55 Op 3 13/0.016 - CDS 108482 - 109855 1642 ## COG1157 Flagellar biosynthesis/type III secretory pathway ATPase 93 55 Op 4 15/0.016 - CDS 109855 - 110541 783 ## COG1317 Flagellar biosynthesis/type III secretory pathway protein 94 55 Op 5 19/0.000 - CDS 110534 - 111529 1255 ## COG1536 Flagellar motor switch protein 95 55 Op 6 1/0.906 - CDS 111522 - 112973 1276 ## COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein - Prom 113006 - 113065 3.6 96 56 Tu 1 . - CDS 113067 - 113210 168 ## COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein - Prom 113296 - 113355 2.2 + Prom 113342 - 113401 3.6 97 57 Tu 1 . + CDS 113425 - 113739 456 ## COG1677 Flagellar hook-basal body protein + Term 113909 - 113954 3.7 98 58 Tu 1 . + CDS 114084 - 114416 320 ## COG2076 Membrane transporters of cations and cationic drugs + Term 114504 - 114530 -0.6 + Prom 114419 - 114478 6.9 99 59 Tu 1 . + CDS 114585 - 115136 9 ## COG1881 Phospholipid-binding protein 100 60 Tu 1 . - CDS 115270 - 115518 105 ## gi|333017811|gb|EGK37118.1| hypothetical protein SFK227_2314 - Prom 115587 - 115646 2.8 - Term 116277 - 116308 4.1 101 61 Op 1 3/0.685 - CDS 116476 - 117120 721 ## COG3203 Outer membrane protein (porin) 102 61 Op 2 . - CDS 117083 - 117595 294 ## COG3203 Outer membrane protein (porin) - Prom 117824 - 117883 6.2 103 62 Tu 1 . - CDS 118108 - 118776 385 ## COG2135 Uncharacterized conserved protein - Prom 118796 - 118855 2.6 - Term 118831 - 118880 -0.1 104 63 Op 1 10/0.024 - CDS 118885 - 119118 306 ## COG0425 Predicted redox protein, regulator of disulfide bond formation 105 63 Op 2 . - CDS 119115 - 120320 1513 ## COG2391 Predicted transporter component - Prom 120358 - 120417 3.9 + Prom 120349 - 120408 6.7 106 64 Tu 1 . + CDS 120507 - 120920 562 ## ECS88_1982 hypothetical protein + Term 120928 - 120962 5.0 - Term 120914 - 120948 5.0 107 65 Op 1 . - CDS 120954 - 122441 1488 ## COG0366 Glycosidases - Term 122462 - 122511 -0.9 108 65 Op 2 . - CDS 122519 - 122884 413 ## S2065 flagellar biosynthesis protein FliT 109 65 Op 3 15/0.016 - CDS 122884 - 123294 444 ## COG1516 Flagellin-specific chaperone FliS 110 65 Op 4 . - CDS 123319 - 124725 1325 ## COG1345 Flagellar capping protein - Prom 124877 - 124936 5.1 + Prom 124765 - 124824 4.2 111 66 Tu 1 . + CDS 124991 - 126748 1503 ## COG1344 Flagellin and related hook-associated proteins + Term 126824 - 126861 -0.6 + Prom 126857 - 126916 76.8 112 67 Op 1 . + CDS 127076 - 127795 800 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit 113 67 Op 2 . + CDS 127844 - 128392 321 ## APECO1_962 flagella biosynthesis protein FliZ + Prom 128396 - 128455 4.0 114 67 Op 3 2/0.835 + CDS 128480 - 129280 1282 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 129290 - 129343 3.9 + Prom 129298 - 129357 8.0 115 68 Op 1 1/0.906 + CDS 129385 - 130371 1156 ## COG2515 1-aminocyclopropane-1-carboxylate deaminase 116 68 Op 2 34/0.000 + CDS 130386 - 131054 719 ## COG0765 ABC-type amino acid transport system, permease component 117 68 Op 3 5/0.252 + CDS 131051 - 131803 655 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 131967 - 132015 5.2 + Prom 131913 - 131972 7.7 118 69 Tu 1 . + CDS 132108 - 132773 399 ## COG2771 DNA-binding HTH domain-containing proteins + Term 132807 - 132847 4.2 - Term 132793 - 132833 8.0 119 70 Tu 1 . - CDS 132841 - 133065 360 ## ECIAI39_1140 hypothetical protein - Prom 133177 - 133236 6.3 + Prom 133421 - 133480 5.2 120 71 Op 1 3/0.685 + CDS 133524 - 134180 494 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 121 71 Op 2 9/0.039 + CDS 134243 - 136009 1654 ## COG0322 Nuclease subunit of the excinuclease complex 122 71 Op 3 1/0.906 + CDS 136066 - 136614 264 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + TRNA 136766 - 136841 93.7 # Gly GCC 0 0 + TRNA 136896 - 136969 51.5 # Cys GCA 0 0 + TRNA 136982 - 137068 71.6 # Leu TAA 0 0 + Prom 137123 - 137182 2.9 123 72 Tu 1 . + CDS 137264 - 137929 722 ## COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA - Term 137921 - 137973 4.3 124 73 Tu 1 . - CDS 137980 - 139191 1123 ## COG0814 Amino acid permeases - Prom 139280 - 139339 5.7 + Prom 139250 - 139309 6.1 125 74 Tu 1 . + CDS 139382 - 139621 338 ## ECUMN_2201 hypothetical protein - Term 139617 - 139651 7.4 126 75 Op 1 . - CDS 139659 - 140156 629 ## COG1528 Ferritin-like protein - Prom 140190 - 140249 8.0 127 75 Op 2 . - CDS 140328 - 140651 72 ## ECS88_1960 hypothetical protein - Prom 140855 - 140914 7.5 128 76 Tu 1 . + CDS 141116 - 141367 312 ## SDY_1117 hypothetical protein + Term 141372 - 141411 7.4 - Term 141360 - 141399 3.6 129 77 Tu 1 . - CDS 141491 - 141847 384 ## COG1528 Ferritin-like protein - Prom 142027 - 142086 6.8 + Prom 142535 - 142594 5.1 130 78 Op 1 16/0.000 + CDS 142644 - 143633 1372 ## COG1879 ABC-type sugar transport system, periplasmic component 131 78 Op 2 21/0.000 + CDS 143703 - 145217 183 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 132 78 Op 3 1/0.906 + CDS 145232 - 146218 1028 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components + Term 146257 - 146294 6.1 + Prom 146271 - 146330 3.6 133 79 Op 1 8/0.039 + CDS 146385 - 147185 768 ## COG1877 Trehalose-6-phosphatase 134 79 Op 2 . + CDS 147160 - 148584 1288 ## COG0380 Trehalose-6-phosphate synthase - Term 148510 - 148539 2.5 135 80 Tu 1 . - CDS 148591 - 149019 425 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Prom 149542 - 149601 4.5 136 81 Op 1 . + CDS 149799 - 150149 280 ## EC55989_2071 transcriptional activator FlhD 137 81 Op 2 . + CDS 150152 - 150730 394 ## EC55989_2070 transcriptional activator FlhC + Term 150757 - 150792 5.0 138 82 Op 1 19/0.000 + CDS 150857 - 151744 955 ## COG1291 Flagellar motor component 139 82 Op 2 5/0.252 + CDS 151741 - 152667 731 ## COG1360 Flagellar motor protein 140 82 Op 3 20/0.000 + CDS 152678 - 154636 1718 ## COG0643 Chemotaxis protein histidine kinase and related kinases 141 82 Op 4 17/0.000 + CDS 154657 - 155160 640 ## COG0835 Chemotaxis signal transduction protein + Term 155186 - 155224 4.5 + Prom 155200 - 155259 5.0 142 82 Op 5 9/0.039 + CDS 155305 - 156966 1437 ## COG0840 Methyl-accepting chemotaxis protein + Prom 157000 - 157059 2.4 143 83 Op 1 13/0.016 + CDS 157257 - 158117 604 ## COG1352 Methylase of chemotaxis methyl-accepting proteins 144 83 Op 2 18/0.000 + CDS 158120 - 159169 743 ## COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 145 83 Op 3 8/0.039 + CDS 159184 - 159573 544 ## COG0784 FOG: CheY-like receiver 146 83 Op 4 4/0.512 + CDS 159584 - 160228 768 ## COG3143 Chemotaxis protein + Prom 160354 - 160413 1.6 147 84 Op 1 13/0.016 + CDS 160433 - 161581 1112 ## COG1377 Flagellar biosynthesis pathway, component FlhB 148 84 Op 2 . + CDS 161574 - 163652 1989 ## COG1298 Flagellar biosynthesis pathway, component FlhA + Term 163751 - 163787 -1.0 + Prom 163691 - 163750 1.9 149 84 Op 3 . + CDS 163808 - 164044 87 ## ECS88_1936 hypothetical protein + Term 164137 - 164203 30.0 - Term 164043 - 164078 5.0 150 85 Tu 1 . - CDS 164188 - 165822 2031 ## COG0018 Arginyl-tRNA synthetase - Prom 165881 - 165940 4.1 + Prom 165955 - 166014 4.2 151 86 Op 1 3/0.685 + CDS 166038 - 166604 454 ## COG3102 Uncharacterized protein conserved in bacteria 152 86 Op 2 1/0.906 + CDS 166618 - 167364 416 ## COG3142 Uncharacterized protein involved in copper resistance + Term 167376 - 167411 2.0 + Prom 167531 - 167590 6.9 153 87 Op 1 7/0.063 + CDS 167752 - 168852 577 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 154 87 Op 2 . + CDS 168877 - 171279 2534 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Term 171368 - 171404 -0.4 155 88 Op 1 17/0.000 - CDS 171493 - 172464 1103 ## COG0500 SAM-dependent methyltransferases 156 88 Op 2 2/0.835 - CDS 172461 - 173204 893 ## COG0500 SAM-dependent methyltransferases 157 88 Op 3 2/0.835 - CDS 173245 - 173640 477 ## COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily 158 88 Op 4 1/0.906 - CDS 173693 - 174511 560 ## COG1801 Uncharacterized conserved protein 159 88 Op 5 . - CDS 174508 - 175074 587 ## COG1335 Amidases related to nicotinamidase - Prom 175101 - 175160 5.6 + Prom 175230 - 175289 4.6 160 89 Op 1 5/0.252 + CDS 175384 - 177156 2214 ## COG0173 Aspartyl-tRNA synthetase 161 89 Op 2 7/0.063 + CDS 177158 - 177601 342 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 162 89 Op 3 8/0.039 + CDS 177630 - 178370 926 ## COG0217 Uncharacterized conserved protein 163 89 Op 4 . + CDS 178405 - 178926 558 ## COG0817 Holliday junction resolvasome, endonuclease subunit + Term 178934 - 178971 5.2 - Term 178751 - 178792 2.3 164 90 Tu 1 . - CDS 178928 - 179530 263 ## ECS88_1920 hypothetical protein - Prom 179562 - 179621 6.9 + Prom 179716 - 179775 7.4 165 91 Op 1 29/0.000 + CDS 179806 - 180417 654 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 166 91 Op 2 . + CDS 180426 - 181436 1143 ## COG2255 Holliday junction resolvasome, helicase subunit + Term 181453 - 181503 2.6 - Term 181592 - 181633 6.4 167 92 Op 1 42/0.000 - CDS 181653 - 182438 875 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 168 92 Op 2 . - CDS 182435 - 183190 219 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 183262 - 183321 6.5 + Prom 183174 - 183233 5.3 169 93 Op 1 . + CDS 183254 - 184201 435 ## COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 170 93 Op 2 1/0.906 + CDS 184280 - 185539 1296 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 185556 - 185590 3.5 + Prom 185564 - 185623 5.3 171 94 Tu 1 . + CDS 185658 - 186629 695 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 186682 - 186718 -0.2 - Term 186622 - 186653 2.1 172 95 Tu 1 . - CDS 186771 - 188189 1411 ## COG0469 Pyruvate kinase - Term 188258 - 188298 1.4 173 96 Tu 1 . - CDS 188317 - 189186 599 ## COG1737 Transcriptional regulators + Prom 189292 - 189351 7.8 174 97 Tu 1 . + CDS 189524 - 190999 1822 ## COG0364 Glucose-6-phosphate 1-dehydrogenase + Term 191079 - 191116 5.1 + Prom 191067 - 191126 6.6 175 98 Op 1 8/0.039 + CDS 191234 - 193045 1690 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 176 98 Op 2 . + CDS 193082 - 193723 935 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase - Term 193721 - 193753 5.6 177 99 Tu 1 . - CDS 193791 - 194969 1370 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) - Prom 195062 - 195121 4.9 + Prom 195017 - 195076 6.6 178 100 Op 1 . + CDS 195103 - 195393 367 ## COG3141 Uncharacterized protein conserved in bacteria 179 100 Op 2 . + CDS 195460 - 195816 236 ## ECIAI39_1203 hypothetical protein + Prom 195927 - 195986 3.7 180 101 Tu 1 . + CDS 196143 - 196802 815 ## COG2979 Uncharacterized protein conserved in bacteria + Prom 196926 - 196985 4.3 181 102 Tu 1 . + CDS 197011 - 199071 1973 ## COG1770 Protease II - Term 199037 - 199067 -0.6 182 103 Op 1 4/0.512 - CDS 199068 - 199730 716 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 183 103 Op 2 . - CDS 199753 - 200409 447 ## COG0388 Predicted amidohydrolase - Prom 200449 - 200508 3.9 184 104 Tu 1 . - CDS 200511 - 200741 308 ## ECP_1786 DNA polymerase III, theta subunit; region: DNA_pol3_theta; cl11635 (EC:2.7.7.7) - Prom 200763 - 200822 2.1 + Prom 200792 - 200851 4.0 185 105 Op 1 8/0.039 + CDS 200880 - 201254 346 ## COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC 186 105 Op 2 . + CDS 201258 - 202130 668 ## COG1276 Putative copper export protein 187 105 Op 3 . + CDS 202143 - 202484 315 ## ECS88_1893 hypothetical protein + Term 202513 - 202569 7.2 188 106 Tu 1 . + CDS 202879 - 203535 439 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 189 107 Op 1 . - CDS 203536 - 203811 137 ## ECS88_1890 hypothetical protein 190 107 Op 2 . - CDS 203832 - 204068 228 ## ECDH10B_1975 hypothetical protein - Prom 204122 - 204181 4.4 191 108 Tu 1 . - CDS 204186 - 205580 1220 ## COG0144 tRNA and rRNA cytosine-C5-methylases - Term 205661 - 205696 7.2 192 109 Op 1 11/0.024 - CDS 205705 - 208344 2562 ## COG3008 Paraquat-inducible protein B 193 109 Op 2 . - CDS 208307 - 209590 827 ## COG2995 Uncharacterized paraquat-inducible protein A - Prom 209665 - 209724 4.8 + Prom 209594 - 209653 3.7 194 110 Op 1 4/0.512 + CDS 209720 - 210217 301 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 + Term 210244 - 210278 3.1 195 110 Op 2 7/0.063 + CDS 210314 - 211012 502 ## COG3109 Activator of osmoprotectant transporter ProP 196 110 Op 3 5/0.252 + CDS 211032 - 213080 1944 ## COG0793 Periplasmic protease + Term 213087 - 213122 6.0 + Prom 213109 - 213168 4.3 197 110 Op 4 . + CDS 213272 - 214132 815 ## COG0501 Zn-dependent protease with chaperone function + Term 214138 - 214204 30.0 - Term 214010 - 214054 0.6 198 111 Tu 1 . - CDS 214200 - 215573 1020 ## COG0477 Permeases of the major facilitator superfamily - Prom 215693 - 215752 8.3 + Prom 215652 - 215711 6.3 199 112 Tu 1 . + CDS 215750 - 216541 847 ## COG1414 Transcriptional regulator + Term 216551 - 216593 7.0 - Term 216539 - 216581 7.0 200 113 Tu 1 . - CDS 216685 - 216924 236 ## ECB_01797 hypothetical protein - Prom 216948 - 217007 5.2 + Prom 217222 - 217281 6.0 201 114 Tu 1 . + CDS 217301 - 217588 242 ## JW1814 hypothetical protein + Term 217602 - 217645 6.1 + Prom 218284 - 218343 2.6 202 115 Tu 1 . + CDS 218415 - 218624 332 ## COG1278 Cold shock proteins + Term 218667 - 218709 4.1 + Prom 218632 - 218691 5.0 203 116 Tu 1 . + CDS 218874 - 219599 552 ## COG0500 SAM-dependent methyltransferases + Term 219848 - 219883 4.3 - Term 219356 - 219391 2.8 204 117 Tu 1 . - CDS 219596 - 220162 608 ## COG1971 Predicted membrane protein 205 118 Op 1 4/0.512 - CDS 220591 - 221049 293 ## COG4811 Predicted membrane protein 206 118 Op 2 13/0.016 - CDS 221124 - 221975 1029 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 207 118 Op 3 13/0.016 - CDS 221988 - 222788 1005 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 208 118 Op 4 . - CDS 222851 - 223822 1262 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 223957 - 224016 4.5 209 119 Tu 1 . + CDS 224285 - 225841 1794 ## COG1253 Hemolysins and related proteins containing CBS domains 210 120 Tu 1 . - CDS 225845 - 227443 1108 ## COG2200 FOG: EAL domain - Prom 227502 - 227561 2.7 - Term 227526 - 227564 9.3 211 121 Tu 1 . - CDS 227574 - 228938 1462 ## COG1760 L-serine deaminase - Prom 229031 - 229090 5.2 212 122 Op 1 6/0.118 - CDS 229122 - 229700 460 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 213 122 Op 2 . - CDS 229704 - 231065 879 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 231113 - 231172 5.2 + Prom 231057 - 231116 4.7 214 123 Tu 1 . + CDS 231139 - 231318 313 ## COG3140 Uncharacterized protein conserved in bacteria - Term 231365 - 231408 5.2 215 124 Tu 1 . - CDS 231438 - 231737 235 ## ECS88_1862 hypothetical protein - Term 231895 - 231955 -0.0 216 125 Tu 1 . - CDS 232159 - 232503 495 ## COG0251 Putative translation initiation inhibitor, yjgF family + Prom 232471 - 232530 1.8 217 126 Op 1 8/0.039 + CDS 232635 - 234545 1599 ## COG1199 Rad3-related DNA helicases 218 126 Op 2 7/0.063 + CDS 234603 - 235298 598 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 219 126 Op 3 7/0.063 + CDS 235338 - 235919 593 ## COG3065 Starvation-inducible outer membrane lipoprotein + Term 235945 - 235973 0.6 + Prom 235979 - 236038 3.1 220 127 Op 1 8/0.039 + CDS 236058 - 237809 1716 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 237828 - 237860 3.0 221 127 Op 2 . + CDS 237891 - 239006 1099 ## COG0349 Ribonuclease D + Prom 239349 - 239408 3.8 222 128 Tu 1 . + CDS 239584 - 240222 511 ## COG1280 Putative threonine efflux protein + Prom 240269 - 240328 3.5 223 129 Op 1 . + CDS 240395 - 240754 368 ## COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance 224 129 Op 2 . + CDS 240758 - 240940 274 ## ECH74115_2521 hypothetical protein + Prom 240986 - 241045 2.7 225 130 Tu 1 . + CDS 241088 - 241336 321 ## COG2261 Predicted membrane protein + Term 241350 - 241387 6.3 - Term 241504 - 241542 -0.8 226 131 Tu 1 . - CDS 241560 - 242585 754 ## COG2199 FOG: GGDEF domain - Prom 242684 - 242743 5.8 + Prom 242684 - 242743 3.9 227 132 Tu 1 . + CDS 242768 - 243022 147 ## COG3042 Putative hemolysin + Term 243051 - 243105 2.1 228 133 Op 1 3/0.685 - CDS 243044 - 243391 392 ## COG3189 Uncharacterized conserved protein 229 133 Op 2 . - CDS 243446 - 244627 654 ## COG2807 Cyanate permease - Prom 244650 - 244709 3.2 + Prom 244644 - 244703 5.7 230 134 Tu 1 . + CDS 244727 - 245545 311 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 245450 - 245483 2.0 231 135 Tu 1 . - CDS 245502 - 245948 602 ## COG2707 Predicted membrane protein - Prom 246048 - 246107 3.1 - Term 246051 - 246098 4.2 232 136 Op 1 2/0.835 - CDS 246223 - 246726 501 ## COG2606 Uncharacterized conserved protein 233 136 Op 2 5/0.252 - CDS 246768 - 248240 944 ## COG2199 FOG: GGDEF domain - Prom 248373 - 248432 2.7 - Term 248391 - 248421 1.0 234 137 Tu 1 4/0.512 - CDS 248439 - 249782 729 ## COG2199 FOG: GGDEF domain - Prom 249871 - 249930 6.8 - Term 250017 - 250055 4.3 235 138 Tu 1 . - CDS 250061 - 251344 945 ## PROTEIN SUPPORTED gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 236 139 Tu 1 . - CDS 251457 - 253391 1939 ## COG2766 Putative Ser protein kinase + Prom 253594 - 253653 4.0 237 140 Op 1 3/0.685 + CDS 253827 - 254573 886 ## COG3713 Outer membrane protein V + Term 254609 - 254637 1.4 238 140 Op 2 . + CDS 254663 - 255517 852 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 255628 - 255660 0.1 239 141 Op 1 4/0.512 - CDS 255568 - 256452 945 ## COG0676 Uncharacterized enzymes related to aldose 1-epimerase - Prom 256473 - 256532 3.9 - Term 256480 - 256509 2.1 240 141 Op 2 . - CDS 256536 - 257531 1062 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 257706 - 257765 6.2 241 142 Op 1 3/0.685 + CDS 257873 - 258286 229 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase 242 142 Op 2 1/0.906 + CDS 258328 - 258600 325 ## COG3139 Uncharacterized protein conserved in bacteria + Prom 258880 - 258939 3.0 243 143 Op 1 7/0.063 + CDS 258970 - 260046 1192 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 244 143 Op 2 7/0.063 + CDS 260073 - 261452 1008 ## COG0477 Permeases of the major facilitator superfamily 245 143 Op 3 3/0.685 + CDS 261469 - 262512 856 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 246 143 Op 4 4/0.512 + CDS 262533 - 263369 701 ## COG0191 Fructose/tagatose bisphosphate aldolase 247 143 Op 5 2/0.835 + CDS 263374 - 264321 710 ## COG0524 Sugar kinases, ribokinase family 248 143 Op 6 4/0.512 + CDS 264376 - 265311 818 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Prom 265357 - 265416 5.1 249 144 Tu 1 . + CDS 265448 - 266206 546 ## COG1349 Transcriptional regulators of sugar metabolism + Term 266268 - 266302 4.0 + Prom 266208 - 266267 2.4 250 145 Tu 1 . + CDS 266324 - 267682 703 ## COG0477 Permeases of the major facilitator superfamily + Term 267727 - 267786 6.6 251 146 Op 1 2/0.835 - CDS 267775 - 268416 664 ## COG1335 Amidases related to nicotinamidase 252 146 Op 2 4/0.512 - CDS 268427 - 269443 880 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 269560 - 269619 15.1 253 147 Tu 1 . - CDS 269627 - 271483 1847 ## COG0616 Periplasmic serine proteases (ClpP class) - Prom 271601 - 271660 4.4 + Prom 271559 - 271618 4.9 254 148 Tu 1 . + CDS 271644 - 272195 612 ## COG0778 Nitroreductase + Prom 272231 - 272290 2.1 255 149 Op 1 5/0.252 + CDS 272312 - 273355 1158 ## COG0709 Selenophosphate synthase 256 149 Op 2 . + CDS 273360 - 275315 1679 ## COG0550 Topoisomerase IA + Term 275351 - 275397 6.2 - Term 275306 - 275344 -0.9 257 150 Tu 1 . - CDS 275392 - 276735 1378 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Prom 276800 - 276859 4.1 + Prom 276719 - 276778 2.2 258 151 Tu 1 . + CDS 276971 - 277243 68 ## APECO1_830 hypothetical protein + Term 277469 - 277497 0.6 259 152 Tu 1 . - CDS 277209 - 277616 301 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 277643 - 277702 4.7 + Prom 277602 - 277661 4.6 260 153 Tu 1 . + CDS 277739 - 278323 462 ## COG0558 Phosphatidylglycerophosphate synthase + Term 278360 - 278386 -1.0 261 154 Op 1 1/0.906 - CDS 278332 - 279639 1451 ## COG2897 Rhodanese-related sulfurtransferase 262 154 Op 2 3/0.685 - CDS 279706 - 280359 194 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 263 154 Op 3 3/0.685 - CDS 280359 - 281894 1481 ## COG4135 ABC-type uncharacterized transport system, permease component 264 154 Op 4 2/0.835 - CDS 281867 - 283033 830 ## COG4134 ABC-type uncharacterized transport system, periplasmic component 265 154 Op 5 3/0.685 - CDS 283043 - 283591 408 ## COG2128 Uncharacterized conserved protein 266 154 Op 6 . - CDS 283591 - 284298 652 ## COG0398 Uncharacterized conserved protein 267 154 Op 7 . - CDS 284312 - 284989 846 ## EcSMS35_1439 hypothetical protein 268 154 Op 8 1/0.906 - CDS 284994 - 285704 618 ## COG0398 Uncharacterized conserved protein - Prom 285724 - 285783 3.5 269 155 Tu 1 . - CDS 285871 - 286677 769 ## COG0708 Exonuclease III - Prom 286875 - 286934 5.3 + Prom 286864 - 286923 9.7 270 156 Op 1 7/0.063 + CDS 287123 - 288343 1302 ## COG4992 Ornithine/acetylornithine aminotransferase 271 156 Op 2 8/0.039 + CDS 288340 - 289374 1000 ## COG3138 Arginine/ornithine N-succinyltransferase beta subunit 272 156 Op 3 7/0.063 + CDS 289371 - 290849 1347 ## COG1012 NAD-dependent aldehyde dehydrogenases 273 156 Op 4 5/0.252 + CDS 290846 - 292189 1131 ## COG3724 Succinylarginine dihydrolase 274 156 Op 5 4/0.512 + CDS 292182 - 293150 790 ## COG2988 Succinylglutamate desuccinylase + Term 293157 - 293190 5.4 + Prom 293310 - 293369 5.5 275 157 Tu 1 . + CDS 293480 - 293965 622 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein + Prom 293988 - 294047 13.4 276 158 Tu 1 . + CDS 294163 - 294738 282 ## COG3758 Uncharacterized protein conserved in bacteria + Term 294973 - 295007 -0.7 - Term 294572 - 294618 1.1 277 159 Tu 1 . - CDS 294698 - 295585 596 ## COG0322 Nuclease subunit of the excinuclease complex - Prom 295608 - 295667 3.6 278 160 Tu 1 . - CDS 295815 - 296642 966 ## COG0171 NAD synthase 279 161 Tu 1 . + CDS 296844 - 297182 407 ## ECS88_1791 DNA-binding transcriptional activator OsmE + Term 297213 - 297248 4.5 + Prom 297315 - 297374 4.7 280 162 Op 1 10/0.024 + CDS 297481 - 297801 425 ## COG1440 Phosphotransferase system cellobiose-specific component IIB + Prom 297807 - 297866 3.5 281 162 Op 2 13/0.016 + CDS 297886 - 299244 1562 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 282 162 Op 3 5/0.252 + CDS 299295 - 299645 547 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 283 162 Op 4 4/0.512 + CDS 299656 - 300495 756 ## COG2207 AraC-type DNA-binding domain-containing proteins 284 163 Op 1 5/0.252 + CDS 300599 - 301951 1612 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 285 163 Op 2 . + CDS 301964 - 302722 644 ## COG3394 Uncharacterized protein conserved in bacteria + Term 302730 - 302775 10.4 286 164 Tu 1 . - CDS 302768 - 305029 2003 ## COG0753 Catalase - Prom 305083 - 305142 3.4 + Prom 304997 - 305056 3.7 287 165 Tu 1 . + CDS 305212 - 305475 172 ## APECO1_800 cell division modulator + Term 305483 - 305513 1.1 - Term 305469 - 305501 2.3 288 166 Tu 1 1/0.906 - CDS 305522 - 306913 1747 ## COG1823 Predicted Na+/dicarboxylate symporter 289 167 Tu 1 . - CDS 307046 - 307636 373 ## COG1988 Predicted membrane-bound metal-dependent hydrolases - Prom 307660 - 307719 3.5 - Term 307754 - 307798 10.3 290 168 Tu 1 . - CDS 307800 - 308468 736 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 308524 - 308583 3.2 + Prom 308386 - 308445 3.3 291 169 Tu 1 . + CDS 308615 - 309151 486 ## ECS88_1778 hypothetical protein + Term 309158 - 309186 1.3 - Term 309146 - 309174 1.3 292 170 Tu 1 . - CDS 309192 - 310052 788 ## COG3001 Fructosamine-3-kinase - Prom 310072 - 310131 3.4 293 171 Tu 1 . - CDS 310158 - 310448 280 ## ECUMN_2013 hypothetical protein 294 172 Tu 1 . - CDS 310549 - 311478 1022 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) - Prom 311585 - 311644 6.1 + Prom 311547 - 311606 12.5 295 173 Tu 1 . + CDS 311764 - 312522 527 ## COG3137 Putative salt-induced outer membrane protein + Term 312531 - 312567 6.2 - Term 312515 - 312557 -0.2 296 174 Tu 1 . - CDS 312575 - 312682 90 ## ECS88_1773 hypothetical protein - Prom 312712 - 312771 7.0 - Term 313165 - 313200 -1.0 297 175 Tu 1 . - CDS 313449 - 313883 134 ## COG0666 FOG: Ankyrin repeat - Prom 313927 - 313986 2.4 + Prom 314162 - 314221 7.1 298 176 Op 1 16/0.000 + CDS 314466 - 316334 1948 ## COG0441 Threonyl-tRNA synthetase 299 176 Op 2 36/0.000 + CDS 316401 - 316880 665 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 + Term 316897 - 316938 9.5 300 176 Op 3 46/0.000 + CDS 316962 - 317174 358 ## PROTEIN SUPPORTED gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 301 176 Op 4 13/0.016 + CDS 317227 - 317583 578 ## PROTEIN SUPPORTED gi|15802128|ref|NP_288150.1| 50S ribosomal protein L20 + Term 317595 - 317626 2.1 + Prom 317790 - 317849 5.0 302 177 Op 1 40/0.000 + CDS 318034 - 319017 1292 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 303 177 Op 2 13/0.016 + CDS 319032 - 321419 2806 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 304 177 Op 3 4/0.512 + CDS 321424 - 321723 318 ## PROTEIN SUPPORTED gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 + Prom 321753 - 321812 6.8 305 178 Op 1 5/0.252 + CDS 321841 - 322821 914 ## COG4139 ABC-type cobalamin transport system, permease component 306 178 Op 2 5/0.252 + CDS 322883 - 323434 570 ## COG0386 Glutathione peroxidase 307 178 Op 3 4/0.512 + CDS 323446 - 324183 708 ## COG4138 ABC-type cobalamin transport system, ATPase component 308 178 Op 4 5/0.252 + CDS 324261 - 324725 273 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 + Term 324770 - 324809 11.1 + Prom 324731 - 324790 5.4 309 179 Op 1 4/0.512 + CDS 325004 - 325717 158 ## COG2200 FOG: EAL domain 310 179 Op 2 . + CDS 325780 - 327216 1132 ## COG0397 Uncharacterized conserved protein 311 180 Op 1 . - CDS 327220 - 327411 163 ## COG4256 Hemin uptake protein - Prom 327440 - 327499 5.0 - Term 327502 - 327537 5.8 312 180 Op 2 . - CDS 327543 - 328589 919 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 328677 - 328736 39.5 - Term 328644 - 328707 17.5 313 181 Tu 1 . - CDS 328751 - 329503 793 ## COG1806 Uncharacterized protein conserved in bacteria - Prom 329677 - 329736 10.4 + Prom 329641 - 329700 8.0 314 182 Tu 1 . + CDS 329917 - 332295 2711 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Term 332304 - 332338 6.5 - Term 332292 - 332326 2.5 315 183 Tu 1 2/0.835 - CDS 332352 - 333998 1068 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Term 334008 - 334042 5.0 316 184 Op 1 12/0.016 - CDS 334055 - 334348 291 ## COG2440 Ferredoxin-like protein 317 184 Op 2 9/0.039 - CDS 334345 - 335634 1218 ## COG0644 Dehydrogenases (flavoproteins) 318 184 Op 3 29/0.000 - CDS 335689 - 336627 1039 ## COG2025 Electron transfer flavoprotein, alpha subunit 319 184 Op 4 . - CDS 336647 - 337411 769 ## COG2086 Electron transfer flavoprotein, beta subunit - Prom 337523 - 337582 6.1 + Prom 337507 - 337566 4.1 320 185 Tu 1 . + CDS 337727 - 338638 611 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 338640 - 338692 5.1 - Term 338630 - 338674 4.7 321 186 Op 1 . - CDS 338681 - 339832 1414 ## COG1960 Acyl-CoA dehydrogenases 322 186 Op 2 3/0.685 - CDS 339846 - 341441 1614 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase - Prom 341512 - 341571 1.9 323 187 Op 1 8/0.039 - CDS 341587 - 342345 925 ## COG0710 3-dehydroquinate dehydratase 324 187 Op 2 4/0.512 - CDS 342376 - 343242 823 ## COG0169 Shikimate 5-dehydrogenase 325 187 Op 3 21/0.000 - CDS 343254 - 344519 867 ## COG0477 Permeases of the major facilitator superfamily - Prom 344669 - 344728 3.2 326 187 Op 4 . - CDS 344746 - 345960 808 ## COG0477 Permeases of the major facilitator superfamily - Prom 345983 - 346042 2.0 327 187 Op 5 . - CDS 346060 - 346416 130 ## UTI89_C1881 hypothetical protein - Prom 346542 - 346601 6.3 - Term 346805 - 346837 6.3 328 188 Tu 1 . - CDS 346845 - 347957 1335 ## COG0628 Predicted permease - Prom 348083 - 348142 2.9 + Prom 347976 - 348035 2.8 329 189 Op 1 6/0.118 + CDS 348171 - 351227 2610 ## COG0277 FAD/FMN-containing dehydrogenases 330 189 Op 2 . + CDS 351224 - 351634 321 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism + Term 351680 - 351722 6.1 + Prom 351651 - 351710 5.6 331 190 Tu 1 . + CDS 351734 - 351922 290 ## SbBS512_E1886 hypothetical protein + Term 351952 - 351997 -0.7 + Prom 352226 - 352285 5.5 332 191 Op 1 3/0.685 + CDS 352471 - 352839 439 ## COG0316 Uncharacterized conserved protein 333 191 Op 2 41/0.000 + CDS 352809 - 354335 1421 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 334 191 Op 3 41/0.000 + CDS 354345 - 355091 778 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 335 191 Op 4 24/0.000 + CDS 355066 - 356337 1054 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 336 191 Op 5 7/0.063 + CDS 356334 - 357554 1367 ## COG0520 Selenocysteine lyase 337 191 Op 6 4/0.512 + CDS 357567 - 357983 487 ## COG2166 SufE protein probably involved in Fe-S center assembly + Prom 357994 - 358053 2.8 338 192 Tu 1 . + CDS 358132 - 359136 697 ## COG1376 Uncharacterized protein conserved in bacteria + Term 359245 - 359281 -0.3 - Term 359149 - 359190 -0.4 339 193 Tu 1 . - CDS 359213 - 359449 365 ## COG4238 Murein lipoprotein - Prom 359490 - 359549 5.6 - Term 359797 - 359833 2.3 340 194 Tu 1 . - CDS 359863 - 361275 1564 ## COG0469 Pyruvate kinase - Prom 361505 - 361564 8.3 + Prom 361729 - 361788 5.2 341 195 Tu 1 . + CDS 361832 - 362041 257 ## ECO111_2144 hypothetical protein + Term 362046 - 362086 8.2 342 196 Op 1 5/0.252 + CDS 362497 - 363123 376 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 343 196 Op 2 . + CDS 363144 - 365246 1794 ## COG2414 Aldehyde:ferredoxin oxidoreductase 344 196 Op 3 . + CDS 365259 - 365897 459 ## c2066 hypothetical protein 345 196 Op 4 3/0.685 + CDS 365961 - 366629 196 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 346 196 Op 5 . + CDS 366626 - 367411 610 ## COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) 347 196 Op 6 . + CDS 367415 - 368227 247 ## ECS88_1717 hypothetical protein 348 197 Tu 1 . - CDS 368239 - 369843 862 ## COG4529 Uncharacterized protein conserved in bacteria - Prom 369904 - 369963 3.8 - Term 369928 - 369954 -0.7 349 198 Tu 1 . - CDS 369969 - 370274 351 ## ECS88_1715 hypothetical protein - Prom 370301 - 370360 2.7 - TRNA 370382 - 370458 96.8 # Val GAC 0 0 + Prom 370266 - 370325 2.4 350 199 Tu 1 . + CDS 370384 - 370572 92 ## + Term 370638 - 370692 3.1 - TRNA 370463 - 370539 92.3 # Val GAC 0 0 + Prom 370752 - 370811 3.3 351 200 Tu 1 . + CDS 370848 - 372104 913 ## COG3468 Type V secretory pathway, adhesin AidA + Term 372108 - 372150 7.5 - Term 372096 - 372138 8.3 352 201 Tu 1 . - CDS 372145 - 373518 1532 ## COG0534 Na+-driven multidrug efflux pump - Prom 373599 - 373658 5.7 + Prom 373460 - 373519 3.6 353 202 Tu 1 . + CDS 373733 - 374374 765 ## COG0307 Riboflavin synthase alpha chain - Term 374370 - 374402 4.6 354 203 Tu 1 . - CDS 374414 - 375562 992 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases - Prom 375790 - 375849 7.3 - Term 375621 - 375653 1.0 355 204 Tu 1 . - CDS 375853 - 377064 1181 ## COG0477 Permeases of the major facilitator superfamily - Prom 377096 - 377155 2.9 + Prom 377089 - 377148 4.4 356 205 Tu 1 . + CDS 377177 - 378109 665 ## COG0583 Transcriptional regulator + Term 378190 - 378242 2.1 - Term 378053 - 378099 0.5 357 206 Tu 1 . - CDS 378106 - 379131 1015 ## COG1609 Transcriptional regulators - Prom 379288 - 379347 4.0 + Prom 379341 - 379400 5.6 358 207 Tu 1 . + CDS 379430 - 379519 125 ## + Term 379570 - 379619 2.4 + Prom 379580 - 379639 3.4 359 208 Tu 1 . + CDS 379685 - 380854 1233 ## COG2814 Arabinose efflux permease + Term 380886 - 380921 0.4 - Term 380854 - 380887 5.4 360 209 Tu 1 . - CDS 381000 - 381581 462 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent - Prom 381634 - 381693 4.4 - Term 381664 - 381705 8.1 361 210 Tu 1 . - CDS 381709 - 382524 206 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 - Prom 382578 - 382637 7.1 + Prom 382766 - 382825 4.7 362 211 Tu 1 . + CDS 382859 - 383206 495 ## COG0278 Glutaredoxin-related protein + Term 383221 - 383261 8.5 - Term 383354 - 383386 -1.0 363 212 Tu 1 . - CDS 383578 - 384225 704 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 384253 - 384312 3.9 - Term 384284 - 384319 5.2 364 213 Op 1 4/0.512 - CDS 384328 - 384735 218 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase 365 213 Op 2 6/0.118 - CDS 384816 - 385913 1131 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 366 213 Op 3 . - CDS 385950 - 386549 524 ## COG1309 Transcriptional regulator - Prom 386624 - 386683 2.2 + Prom 386571 - 386630 2.5 367 214 Op 1 4/0.512 + CDS 386652 - 386891 74 ## COG3313 Predicted Fe-S protein 368 214 Op 2 3/0.685 + CDS 386940 - 387836 990 ## COG4989 Predicted oxidoreductase 369 214 Op 3 . + CDS 387902 - 388438 674 ## COG2032 Cu/Zn superoxide dismutase + Term 388496 - 388546 3.1 - Term 388264 - 388301 2.2 370 215 Op 1 6/0.118 - CDS 388439 - 390451 1277 ## COG1289 Predicted membrane protein 371 215 Op 2 . - CDS 390451 - 391308 620 ## COG1566 Multidrug resistance efflux pump 372 215 Op 3 . - CDS 391311 - 391547 98 ## ECS88_1691 hypothetical protein - Prom 391691 - 391750 9.9 + Prom 391535 - 391594 6.9 373 216 Tu 1 . + CDS 391742 - 392182 331 ## COG1846 Transcriptional regulators + Term 392346 - 392374 -0.0 - Term 392064 - 392110 2.6 374 217 Tu 1 . - CDS 392251 - 392718 585 ## COG3133 Outer membrane lipoprotein - Prom 392817 - 392876 6.9 + Prom 392863 - 392922 3.2 375 218 Tu 1 . + CDS 392992 - 394101 885 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 376 219 Op 1 3/0.685 + CDS 394205 - 394528 292 ## COG3895 Predicted periplasmic protein 377 219 Op 2 5/0.252 + CDS 394587 - 395243 660 ## COG0259 Pyridoxamine-phosphate oxidase + Prom 395248 - 395307 3.2 378 220 Tu 1 5/0.252 + CDS 395372 - 396646 830 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Prom 396658 - 396717 24.3 379 221 Tu 1 . + CDS 396744 - 397604 885 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Term 397614 - 397656 5.0 - Term 397598 - 397643 5.9 380 222 Tu 1 . - CDS 397648 - 398253 598 ## COG0625 Glutathione S-transferase - Prom 398274 - 398333 2.9 - Term 398300 - 398334 5.2 381 223 Tu 1 . - CDS 398358 - 399860 1649 ## COG3104 Dipeptide/tripeptide permease - Prom 400025 - 400084 4.5 382 224 Op 1 10/0.024 - CDS 400471 - 401106 618 ## COG0177 Predicted EndoIII-related endonuclease 383 224 Op 2 13/0.016 - CDS 401106 - 401801 756 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 384 224 Op 3 12/0.016 - CDS 401805 - 402425 549 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 385 224 Op 4 12/0.016 - CDS 402429 - 403487 881 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 386 224 Op 5 10/0.024 - CDS 403488 - 405422 1618 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 387 224 Op 6 12/0.016 - CDS 405415 - 405993 403 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 388 224 Op 7 . - CDS 405993 - 406574 556 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 389 224 Op 8 . - CDS 406651 - 407091 366 ## SSON_1532 hypothetical protein - Prom 407115 - 407174 4.1 390 225 Tu 1 . - CDS 407177 - 407392 242 ## G2583_2020 OriC-binding nucleoid-associated protein - Prom 407528 - 407587 3.7 - Term 407603 - 407651 8.0 391 226 Tu 1 . - CDS 407665 - 407865 93 ## ECUMN_1915 beta-lactam resistance membrane protein - Prom 407925 - 407984 3.0 + Prom 407862 - 407921 5.8 392 227 Tu 1 . + CDS 408033 - 409073 994 ## COG0673 Predicted dehydrogenases and related proteins + Term 409098 - 409164 31.6 393 228 Tu 1 . - CDS 409161 - 410162 1196 ## COG1816 Adenosine deaminase - Prom 410192 - 410251 6.5 - Term 410213 - 410263 7.1 394 229 Op 1 3/0.685 - CDS 410266 - 411438 925 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 395 229 Op 2 . - CDS 411448 - 413040 1619 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 413135 - 413194 5.3 + Prom 413106 - 413165 7.8 396 230 Tu 1 . + CDS 413215 - 414243 758 ## COG1609 Transcriptional regulators + Prom 414276 - 414335 2.0 397 231 Tu 1 . + CDS 414355 - 415122 245 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Prom 415270 - 415329 5.5 398 232 Tu 1 . + CDS 415354 - 415941 565 ## COG1309 Transcriptional regulator + Term 415957 - 415995 5.7 + Prom 416168 - 416227 3.6 399 233 Op 1 1/0.906 + CDS 416331 - 418142 1941 ## COG3250 Beta-galactosidase/beta-glucuronidase 400 233 Op 2 3/0.685 + CDS 418139 - 418279 85 ## PROTEIN SUPPORTED gi|90020673|ref|YP_526500.1| ribosomal protein L9 401 233 Op 3 3/0.685 + CDS 418315 - 419031 493 ## COG2211 Na+/melibiose symporter and related transporters 402 233 Op 4 . + CDS 419074 - 419589 438 ## COG2211 Na+/melibiose symporter and related transporters 403 233 Op 5 . + CDS 419646 - 420893 1086 ## ECS88_1661 outer membrane porin protein + Term 420930 - 420987 12.5 - Term 420927 - 420962 5.7 404 234 Tu 1 . - CDS 420976 - 422484 1601 ## COG5339 Uncharacterized protein conserved in bacteria - Prom 422524 - 422583 1.9 - Term 422494 - 422527 4.1 405 235 Tu 1 . - CDS 422585 - 423760 1359 ## COG1482 Phosphomannose isomerase - Prom 423803 - 423862 4.3 + Prom 423830 - 423889 5.2 406 236 Tu 1 4/0.512 + CDS 423959 - 425605 486 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase + Term 425612 - 425639 1.5 + Prom 425630 - 425689 77.7 407 237 Tu 1 . + CDS 425737 - 427140 1645 ## COG0114 Fumarase + Term 427150 - 427207 1.5 408 238 Op 1 . - CDS 427137 - 428066 626 ## APECO1_693 DNA replication terminus site-binding protein - Term 428100 - 428129 -0.3 409 238 Op 2 40/0.000 - CDS 428142 - 429443 1183 ## COG0642 Signal transduction histidine kinase 410 238 Op 3 . - CDS 429447 - 430166 604 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 430364 - 430423 4.1 + Prom 430206 - 430265 5.1 411 239 Tu 1 . + CDS 430295 - 430630 329 ## COG3136 Uncharacterized membrane protein required for alginate biosynthesis 412 240 Op 1 7/0.063 - CDS 430627 - 431349 696 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 413 240 Op 2 . - CDS 431386 - 432600 1213 ## COG0531 Amino acid transporters 414 240 Op 3 . - CDS 432690 - 432800 109 ## - Prom 432878 - 432937 4.6 - Term 432937 - 432965 1.3 415 241 Tu 1 . - CDS 432986 - 433930 993 ## ECO103_1744 hypothetical protein - Prom 434049 - 434108 4.8 + Prom 434309 - 434368 4.5 416 242 Op 1 17/0.000 + CDS 434454 - 435986 1477 ## COG3288 NAD/NADP transhydrogenase alpha subunit 417 242 Op 2 . + CDS 435997 - 437385 1485 ## COG1282 NAD/NADP transhydrogenase beta subunit + Term 437401 - 437450 12.9 418 243 Tu 1 . - CDS 437422 - 438375 958 ## COG0628 Predicted permease - Prom 438522 - 438581 5.1 + Prom 438553 - 438612 4.2 419 244 Op 1 12/0.016 + CDS 438786 - 439151 461 ## COG2076 Membrane transporters of cations and cationic drugs 420 244 Op 2 . + CDS 439138 - 439467 465 ## COG2076 Membrane transporters of cations and cationic drugs + Term 439474 - 439509 6.4 - Term 439462 - 439497 6.4 421 245 Tu 1 . - CDS 439506 - 440327 584 ## COG3591 V8-like Glu-specific endopeptidase - Prom 440371 - 440430 3.4 422 246 Tu 1 . - CDS 440603 - 440911 329 ## - Prom 441048 - 441107 5.8 + Prom 441095 - 441154 3.7 423 247 Tu 1 . + CDS 441182 - 441286 60 ## + Term 441295 - 441342 9.6 - Term 441286 - 441327 7.3 424 248 Tu 1 . - CDS 441336 - 442589 947 ## COG0477 Permeases of the major facilitator superfamily - Prom 442657 - 442716 4.6 + Prom 442613 - 442672 3.7 425 249 Op 1 5/0.252 + CDS 442696 - 443589 210 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 + Prom 443627 - 443686 1.6 426 249 Op 2 3/0.685 + CDS 443724 - 444944 274 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 + Term 444986 - 445050 6.5 + Prom 444990 - 445049 4.7 427 250 Tu 1 . + CDS 445069 - 445764 780 ## COG0132 Dethiobiotin synthetase + Term 445808 - 445846 7.6 428 251 Tu 1 . - CDS 445717 - 446898 983 ## COG0038 Chloride channel protein EriC - Prom 447025 - 447084 5.8 - Term 447035 - 447081 4.2 429 252 Op 1 4/0.512 - CDS 447095 - 447709 556 ## COG3381 Uncharacterized component of anaerobic dehydrogenases - Term 447714 - 447744 3.0 430 252 Op 2 9/0.039 - CDS 447752 - 448606 646 ## COG3302 DMSO reductase anchor subunit 431 252 Op 3 16/0.000 - CDS 448608 - 449225 451 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 432 252 Op 4 5/0.252 - CDS 449236 - 451632 1560 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 451652 - 451711 2.0 433 252 Op 5 . - CDS 451720 - 454146 2180 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 454179 - 454238 3.7 - Term 454293 - 454328 3.7 434 253 Tu 1 . - CDS 454345 - 454650 176 ## c1976 hypothetical protein - Prom 454863 - 454922 2.6 + Prom 454448 - 454507 3.2 435 254 Tu 1 . + CDS 454722 - 455468 546 ## ECBD_2061 hypothetical protein + Term 455479 - 455518 -0.7 - Term 455224 - 455259 -0.9 436 255 Op 1 . - CDS 455471 - 456031 486 ## PROTEIN SUPPORTED gi|116490772|ref|YP_810316.1| acetyltransferase 437 255 Op 2 . - CDS 456066 - 456407 293 ## ECS88_1628 hypothetical protein - Prom 456489 - 456548 4.6 + Prom 456359 - 456418 4.6 438 256 Tu 1 . + CDS 456542 - 456868 264 ## COG1742 Uncharacterized conserved protein + Prom 456929 - 456988 2.8 439 257 Op 1 2/0.835 + CDS 457074 - 458288 1429 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 440 257 Op 2 7/0.063 + CDS 458300 - 459319 905 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 441 258 Op 1 3/0.685 + CDS 459483 - 459731 267 ## COG0477 Permeases of the major facilitator superfamily + Term 459740 - 459775 4.2 + Prom 459741 - 459800 4.2 442 258 Op 2 . + CDS 459820 - 461280 1393 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Term 461274 - 461309 5.2 443 259 Tu 1 . - CDS 461316 - 461519 376 ## ECIAI1_1560 putative selenium carrying protein - Prom 461561 - 461620 1.5 - Term 461652 - 461687 5.8 444 260 Op 1 5/0.252 - CDS 461696 - 462382 664 ## COG1802 Transcriptional regulators - Prom 462408 - 462467 5.5 - Term 462430 - 462466 3.0 445 260 Op 2 . - CDS 462471 - 463217 905 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity - Prom 463347 - 463406 2.2 446 261 Tu 1 . + CDS 463363 - 465399 1736 ## COG0339 Zn-dependent oligopeptidases + Prom 465820 - 465879 6.9 447 262 Tu 1 . + CDS 465907 - 466797 429 ## COG2199 FOG: GGDEF domain + Term 466912 - 466946 3.0 - Term 466996 - 467039 10.4 448 263 Op 1 . - CDS 467067 - 467162 66 ## - Prom 467222 - 467281 3.8 449 263 Op 2 . - CDS 467289 - 468476 916 ## COG0477 Permeases of the major facilitator superfamily - Prom 468542 - 468601 3.8 + Prom 468455 - 468514 5.2 450 264 Tu 1 . + CDS 468671 - 469570 827 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 469573 - 469623 4.3 - Term 469561 - 469611 7.3 451 265 Tu 1 . - CDS 469615 - 470313 237 ## COG2188 Transcriptional regulators - Prom 470515 - 470574 6.4 + Prom 470418 - 470477 1.7 452 266 Tu 1 10/0.024 + CDS 470512 - 470823 366 ## COG1440 Phosphotransferase system cellobiose-specific component IIB + Prom 470825 - 470884 3.8 453 267 Op 1 13/0.016 + CDS 470938 - 472260 831 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 454 267 Op 2 . + CDS 472288 - 472599 338 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 455 267 Op 3 1/0.906 + CDS 472654 - 474327 1346 ## COG4580 Maltoporin (phage lambda and maltose receptor) 456 267 Op 4 . + CDS 474351 - 475790 1013 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Term 475803 - 475842 10.0 457 268 Op 1 . - CDS 475847 - 476065 128 ## ECS88_1608 hypothetical protein 458 268 Op 2 3/0.685 - CDS 476097 - 476480 265 ## COG2207 AraC-type DNA-binding domain-containing proteins 459 268 Op 3 . - CDS 476501 - 476935 418 ## COG1846 Transcriptional regulators - Prom 476963 - 477022 7.1 + Prom 477055 - 477114 5.4 460 269 Tu 1 . + CDS 477147 - 477812 684 ## COG2095 Multiple antibiotic transporter + Term 477817 - 477842 -0.5 - Term 477801 - 477834 3.8 461 270 Tu 1 . - CDS 477837 - 479027 922 ## COG2814 Arabinose efflux permease - Prom 479060 - 479119 6.6 462 271 Tu 1 . - CDS 479366 - 480247 736 ## COG0583 Transcriptional regulator - Prom 480280 - 480339 3.8 + Prom 480265 - 480324 2.4 463 272 Op 1 3/0.685 + CDS 480348 - 481736 1426 ## COG1012 NAD-dependent aldehyde dehydrogenases 464 272 Op 2 . + CDS 481812 - 482726 647 ## COG2066 Glutaminase 465 272 Op 3 . + CDS 482726 - 482986 173 ## EcSMS35_1649 hypothetical protein + Prom 483059 - 483118 4.9 466 273 Tu 1 . + CDS 483228 - 484646 1259 ## COG2199 FOG: GGDEF domain + Prom 484648 - 484707 2.6 467 274 Tu 1 . + CDS 484873 - 486324 1627 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases + Term 486331 - 486364 3.8 + Prom 486345 - 486404 4.1 468 275 Tu 1 . + CDS 486521 - 487435 657 ## COG3781 Predicted membrane protein - Term 487366 - 487416 -0.2 469 276 Tu 1 . - CDS 487439 - 488197 636 ## COG4106 Trans-aconitate methyltransferase - Prom 488297 - 488356 1.9 + Prom 488407 - 488466 4.5 470 277 Op 1 8/0.039 + CDS 488505 - 488771 280 ## COG1396 Predicted transcriptional regulators 471 277 Op 2 . + CDS 488771 - 490093 691 ## COG3550 Uncharacterized protein related to capsule biosynthesis enzymes 472 277 Op 3 . + CDS 490133 - 490333 79 ## gi|331657514|ref|ZP_08358476.1| toxin-antitoxin system, toxin component, HipA family + Term 490386 - 490431 3.7 473 278 Tu 1 . - CDS 490352 - 490609 143 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 490646 - 490705 1.9 + Prom 490602 - 490661 4.0 474 279 Tu 1 . + CDS 490740 - 491234 175 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Prom 491810 - 491869 5.7 475 280 Tu 1 . + CDS 492010 - 492573 385 ## COG3539 P pilus assembly protein, pilin FimA + Term 492735 - 492780 1.3 + Prom 492702 - 492761 3.7 476 281 Op 1 10/0.024 + CDS 492935 - 493645 483 ## COG3121 P pilus assembly protein, chaperone PapD 477 281 Op 2 6/0.118 + CDS 493687 - 496338 1002 ## COG3188 P pilus assembly protein, porin PapC 478 281 Op 3 4/0.512 + CDS 496352 - 496882 239 ## COG3539 P pilus assembly protein, pilin FimA 479 281 Op 4 . + CDS 496895 - 497398 196 ## COG3539 P pilus assembly protein, pilin FimA 480 281 Op 5 . + CDS 497458 - 498372 298 ## APECO1_629 putative Fml fimbrial adhesin FmlD precursor + Term 498404 - 498451 0.2 + Prom 498451 - 498510 11.3 481 282 Tu 1 . + CDS 498711 - 500990 1304 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 501004 - 501046 8.0 + Prom 501132 - 501191 5.0 482 283 Op 1 . + CDS 501238 - 501435 174 ## ECS88_1588 hypothetical protein 483 283 Op 2 2/0.835 + CDS 501510 - 502271 309 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 502319 - 502355 3.0 + Prom 502526 - 502585 4.4 484 284 Tu 1 . + CDS 502673 - 504355 1356 ## COG3119 Arylsulfatase A and related enzymes + Term 504370 - 504422 10.0 - Term 504178 - 504232 4.9 485 285 Op 1 . - CDS 504421 - 506073 1196 ## APECO1_2913 hypothetical protein 486 285 Op 2 . - CDS 506097 - 506288 187 ## ECH74115_4903 cellulose biosynthesis protein BcsF 487 285 Op 3 . - CDS 506285 - 507856 761 ## ECS88_3951 cellulose biosynthesis protease - Prom 507912 - 507971 4.8 + Prom 507890 - 507949 4.3 488 286 Op 1 . + CDS 508129 - 508317 210 ## SDY_4555 hypothetical protein 489 286 Op 2 1/0.906 + CDS 508329 - 509081 676 ## COG1192 ATPases involved in chromosome partitioning 490 286 Op 3 . + CDS 509078 - 511696 2439 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 491 286 Op 4 . + CDS 511707 - 514046 2388 ## UTI89_C4064 cellulose synthase regulator protein 492 286 Op 5 4/0.512 + CDS 514053 - 515159 1152 ## COG3405 Endoglucanase Y 493 286 Op 6 5/0.252 + CDS 515141 - 518614 3415 ## COG0457 FOG: TPR repeat 494 287 Tu 1 . + CDS 518729 - 520684 1999 ## COG2200 FOG: EAL domain + Term 520709 - 520762 4.3 + Prom 520719 - 520778 3.6 495 288 Tu 1 . + CDS 520867 - 522153 1535 ## COG1301 Na+/H+-dicarboxylate symporters + Term 522166 - 522207 6.1 + Prom 522336 - 522395 2.8 496 289 Tu 1 . + CDS 522415 - 523869 1619 ## COG0612 Predicted Zn-dependent peptidases + Term 523870 - 523917 3.3 - Term 523858 - 523903 5.0 497 290 Tu 1 . - CDS 523965 - 524894 1027 ## COG0524 Sugar kinases, ribokinase family - Prom 525119 - 525178 2.6 + Prom 524929 - 524988 2.8 498 291 Op 1 4/0.512 + CDS 525126 - 525893 559 ## COG2200 FOG: EAL domain 499 291 Op 2 . + CDS 525963 - 528023 1765 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis 500 292 Tu 1 . - CDS 528064 - 529386 1632 ## COG0477 Permeases of the major facilitator superfamily 501 293 Op 1 3/0.685 - CDS 529779 - 530792 1047 ## COG1295 Predicted membrane protein 502 293 Op 2 . - CDS 530841 - 531722 690 ## COG0583 Transcriptional regulator - Prom 531796 - 531855 2.0 503 294 Tu 1 . + CDS 532260 - 532862 504 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 532872 - 532921 8.4 - Term 532860 - 532909 8.4 504 295 Tu 1 . - CDS 532913 - 534562 1724 ## COG1626 Neutral trehalase - Prom 534674 - 534733 6.1 + Prom 534888 - 534947 4.1 505 296 Tu 1 . + CDS 534967 - 536364 1196 ## COG1858 Cytochrome c peroxidase + Term 536372 - 536413 8.8 + Prom 536403 - 536462 6.2 506 297 Op 1 . + CDS 536575 - 536889 193 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins 507 297 Op 2 1/0.906 + CDS 536901 - 538058 371 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) + Term 538111 - 538150 5.0 + Prom 538255 - 538314 9.4 508 298 Op 1 . + CDS 538376 - 540034 905 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components 509 298 Op 2 . + CDS 540072 - 542444 1779 ## APECO1_623 hypothetical protein + Term 542464 - 542493 -0.5 510 298 Op 3 3/0.685 + CDS 542501 - 545284 1744 ## COG0612 Predicted Zn-dependent peptidases + Term 545291 - 545327 6.3 + Prom 545494 - 545553 6.4 511 299 Tu 1 . + CDS 545645 - 547045 1649 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins 512 300 Tu 1 . + CDS 547473 - 548237 62 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 548382 - 548441 7.7 513 301 Tu 1 . + CDS 548606 - 549334 225 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 549406 - 549433 -0.1 514 302 Tu 1 . + CDS 549479 - 549760 105 ## gi|293412945|ref|ZP_06655613.1| predicted protein - Term 549640 - 549685 10.6 515 303 Op 1 27/0.000 - CDS 549697 - 552810 3249 ## COG0841 Cation/multidrug efflux pump 516 303 Op 2 . - CDS 552835 - 553992 1004 ## COG0845 Membrane-fusion protein - Prom 554142 - 554201 2.6 517 304 Tu 1 . + CDS 554052 - 554381 59 ## ECBD_0228 hypothetical protein + Term 554383 - 554417 -0.5 518 305 Tu 1 . - CDS 554331 - 554858 391 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 554950 - 555009 2.8 - Term 555587 - 555649 12.4 519 306 Tu 1 . - CDS 555657 - 556229 489 ## COG3247 Uncharacterized conserved protein - Prom 556360 - 556419 5.2 + Prom 556337 - 556396 5.9 520 307 Tu 1 . + CDS 556484 - 556816 516 ## ECS88_3922 acid-resistance protein + Term 556863 - 556905 0.4 + Prom 556829 - 556888 2.6 521 308 Op 1 . + CDS 556920 - 557258 282 ## SSON_3577 acid-resistance protein + Term 557276 - 557318 7.2 522 308 Op 2 . + CDS 557322 - 557969 635 ## COG1285 Uncharacterized membrane protein + Term 557988 - 558029 6.1 - Term 557850 - 557895 0.5 523 309 Op 1 10/0.024 - CDS 558021 - 558791 227 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 524 309 Op 2 2/0.835 - CDS 558788 - 559780 743 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 525 309 Op 3 3/0.685 - CDS 559829 - 560452 617 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 526 309 Op 4 4/0.512 - CDS 560452 - 560946 450 ## COG3721 Putative heme iron utilization protein 527 309 Op 5 2/0.835 - CDS 560959 - 562218 1134 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 528 309 Op 6 . - CDS 562316 - 563230 828 ## COG4558 ABC-type hemin transport system, periplasmic component - Prom 563272 - 563331 6.2 + Prom 563818 - 563877 7.5 529 310 Op 1 4/0.512 + CDS 563914 - 565896 1969 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 565902 - 565933 4.1 530 310 Op 2 . + CDS 565945 - 566973 738 ## COG3720 Putative heme degradation protein + Term 566988 - 567023 4.0 - Term 566806 - 566843 -0.5 531 311 Tu 1 . - CDS 567030 - 567533 367 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 567622 - 567681 5.3 532 312 Tu 1 . - CDS 567713 - 568279 601 ## COG3065 Starvation-inducible outer membrane lipoprotein - Prom 568509 - 568568 3.8 - Term 569364 - 569419 3.6 533 313 Tu 1 . - CDS 569463 - 569888 551 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 569987 - 570046 5.0 - Term 570044 - 570097 2.4 534 314 Tu 1 . - CDS 570221 - 570394 80 ## ECUMN_3987 hypothetical protein + Prom 570169 - 570228 4.5 535 315 Tu 1 . + CDS 570389 - 570505 92 ## + Term 570524 - 570562 6.1 - Term 570504 - 570557 6.7 536 316 Op 1 7/0.063 - CDS 570559 - 571911 500 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 537 316 Op 2 . - CDS 571983 - 572825 802 ## COG2961 Protein involved in catabolism of external DNA - Prom 572954 - 573013 4.3 + Prom 572918 - 572977 1.9 538 317 Tu 1 . + CDS 573028 - 575070 2627 ## COG0339 Zn-dependent oligopeptidases + Term 575105 - 575134 3.5 + Prom 575109 - 575168 32.5 539 318 Tu 1 . + CDS 575221 - 575877 725 ## COG0500 SAM-dependent methyltransferases + Term 575885 - 575939 8.9 540 319 Tu 1 . - CDS 575943 - 577412 1657 ## COG3104 Dipeptide/tripeptide permease - Prom 577533 - 577592 6.0 - Term 577667 - 577706 7.1 541 320 Tu 1 . - CDS 577729 - 578163 617 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 578360 - 578419 5.2 + Prom 578337 - 578396 2.2 542 321 Tu 1 . + CDS 578554 - 578805 104 ## G2583_4220 universal stress protein B 543 322 Tu 1 . - CDS 578865 - 580364 1626 ## COG0306 Phosphate/sulphate permeases - Prom 580474 - 580533 7.6 + Prom 580449 - 580508 6.9 544 323 Tu 1 . + CDS 580596 - 581789 1091 ## COG2081 Predicted flavoproteins + Term 581836 - 581878 4.2 - Term 581824 - 581864 9.0 545 324 Tu 1 . - CDS 581876 - 582940 585 ## APECO1_2962 hypothetical protein - Prom 583061 - 583120 5.4 + Prom 583380 - 583439 2.9 546 325 Op 1 10/0.024 + CDS 583662 - 584729 1088 ## COG0845 Membrane-fusion protein 547 325 Op 2 45/0.000 + CDS 584726 - 587461 2797 ## COG1131 ABC-type multidrug transport system, ATPase component 548 325 Op 3 . + CDS 587461 - 588585 1124 ## COG0842 ABC-type multidrug transport system, permease component + Term 588592 - 588645 6.2 549 326 Op 1 3/0.685 - CDS 588695 - 589546 796 ## COG0191 Fructose/tagatose bisphosphate aldolase 550 326 Op 2 2/0.835 - CDS 589578 - 589847 286 ## COG1925 Phosphotransferase system, HPr-related proteins 551 326 Op 3 3/0.685 - CDS 589837 - 591345 955 ## COG1070 Sugar (pentulose and hexulose) kinases 552 326 Op 4 10/0.024 - CDS 591338 - 592696 1506 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 553 326 Op 5 13/0.016 - CDS 592773 - 593054 270 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 554 326 Op 6 2/0.835 - CDS 593051 - 593524 348 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 555 326 Op 7 1/0.906 - CDS 593549 - 594295 642 ## COG2188 Transcriptional regulators - Prom 594387 - 594446 6.1 - Term 594300 - 594348 1.3 556 327 Op 1 3/0.685 - CDS 594494 - 594895 499 ## COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 557 327 Op 2 17/0.000 - CDS 594901 - 595707 263 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 558 327 Op 3 44/0.000 - CDS 595704 - 596468 274 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 559 327 Op 4 49/0.000 - CDS 596468 - 597301 1094 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 560 327 Op 5 38/0.000 - CDS 597298 - 598242 257 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 561 327 Op 6 . - CDS 598242 - 599816 1864 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 599846 - 599905 4.7 562 328 Tu 1 . + CDS 599841 - 600017 105 ## UTI89_C3992 hypothetical protein + Term 600107 - 600143 2.0 - Term 599841 - 599881 3.0 563 329 Op 1 1/0.906 - CDS 599927 - 600514 541 ## COG2091 Phosphopantetheinyl transferase 564 329 Op 2 . - CDS 600569 - 601618 904 ## COG0628 Predicted permease - Prom 601639 - 601698 2.7 + Prom 601625 - 601684 1.7 565 330 Tu 1 . + CDS 601750 - 602967 1293 ## COG0477 Permeases of the major facilitator superfamily + Term 603014 - 603058 3.5 - Term 602910 - 602957 5.9 566 331 Op 1 . - CDS 602971 - 603528 739 ## APECO1_2982 hypothetical protein 567 331 Op 2 . - CDS 603601 - 604266 676 ## COG1738 Uncharacterized conserved protein - Prom 604328 - 604387 4.6 + Prom 604404 - 604463 6.8 568 332 Tu 1 . + CDS 604487 - 604732 262 ## COG0425 Predicted redox protein, regulator of disulfide bond formation + Term 604891 - 604921 2.7 569 333 Op 1 5/0.252 - CDS 605001 - 607199 2338 ## COG2217 Cation transport ATPase - Term 607231 - 607262 3.4 570 333 Op 2 . - CDS 607273 - 607899 750 ## COG3714 Predicted membrane protein - Prom 608012 - 608071 3.0 + Prom 607957 - 608016 3.4 571 334 Tu 1 . + CDS 608040 - 608399 341 ## ECS88_3870 hypothetical protein + Term 608480 - 608512 -1.0 572 335 Op 1 6/0.118 - CDS 608402 - 608671 339 ## COG3776 Predicted membrane protein 573 335 Op 2 . - CDS 608661 - 609257 190 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 - Prom 609387 - 609446 3.2 + Prom 609276 - 609335 5.1 574 336 Op 1 9/0.039 + CDS 609407 - 610903 744 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 575 336 Op 2 28/0.000 + CDS 610906 - 611574 348 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 576 336 Op 3 7/0.063 + CDS 611567 - 612625 1075 ## COG2177 Cell division protein + Term 612669 - 612708 3.7 + Prom 612714 - 612773 6.2 577 337 Tu 1 . + CDS 612870 - 613724 1045 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 613748 - 613794 10.3 578 338 Op 1 1/0.906 - CDS 613828 - 614712 766 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 579 338 Op 2 . - CDS 614712 - 615632 459 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 580 338 Op 3 13/0.016 - CDS 615634 - 616488 457 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 581 338 Op 4 13/0.016 - CDS 616481 - 617227 540 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 582 338 Op 5 9/0.039 - CDS 617244 - 617729 357 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 583 338 Op 6 . - CDS 617736 - 618137 211 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 618165 - 618224 5.0 + Prom 618910 - 618969 5.1 584 339 Tu 1 . + CDS 619072 - 620175 1330 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Term 620171 - 620202 2.1 585 340 Tu 1 . - CDS 620363 - 620746 322 ## ECS88_3856 hypothetical protein - Prom 620785 - 620844 4.7 + Prom 621091 - 621150 2.1 586 341 Op 1 20/0.000 + CDS 621170 - 622279 1234 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component 587 341 Op 2 24/0.000 + CDS 622327 - 623253 1281 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 588 341 Op 3 19/0.000 + CDS 623250 - 624527 1470 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 589 341 Op 4 18/0.000 + CDS 624524 - 625291 258 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 590 341 Op 5 . + CDS 625293 - 626006 268 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 626080 - 626122 -0.8 + Prom 626268 - 626327 7.8 591 342 Op 1 35/0.000 + CDS 626403 - 627719 1580 ## COG1653 ABC-type sugar transport system, periplasmic component + Prom 627721 - 627780 2.6 592 342 Op 2 1/0.906 + CDS 627817 - 628254 436 ## COG1175 ABC-type sugar transport systems, permease components 593 342 Op 3 38/0.000 + CDS 628160 - 628750 454 ## COG1175 ABC-type sugar transport systems, permease components 594 342 Op 4 21/0.000 + CDS 628747 - 629592 918 ## COG0395 ABC-type sugar transport system, permease component 595 342 Op 5 4/0.512 + CDS 629594 - 630664 1379 ## COG3839 ABC-type sugar transport systems, ATPase components 596 342 Op 6 . + CDS 630661 - 631404 769 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 631426 - 631469 8.1 - Term 631300 - 631343 7.0 597 343 Tu 1 . - CDS 631391 - 631831 337 ## ECDH10B_3622 hypothetical protein - Prom 631854 - 631913 3.0 + Prom 631805 - 631864 2.4 598 344 Tu 1 . + CDS 631951 - 633684 1815 ## COG0405 Gamma-glutamyltransferase + Term 633691 - 633728 7.0 599 345 Tu 1 . - CDS 633722 - 634006 243 ## ECS88_3843 hypothetical protein - Prom 634034 - 634093 2.9 - Term 634201 - 634245 2.1 600 346 Op 1 . - CDS 634456 - 634911 196 ## APECO1_3014 hypothetical protein 601 346 Op 2 . - CDS 634947 - 635192 67 ## c4233 hypothetical protein - Prom 635238 - 635297 4.9 602 346 Op 3 . - CDS 635325 - 636125 190 ## COG3157 Hemolysin-coregulated protein (uncharacterized) - Prom 636200 - 636259 16.1 - Term 636257 - 636303 0.8 603 347 Tu 1 . - CDS 636361 - 636849 356 ## PROTEIN SUPPORTED gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase - Prom 636879 - 636938 3.2 604 348 Tu 1 . - CDS 637078 - 637281 184 ## ECS88_3838 hypothetical protein - Prom 637330 - 637389 1.8 + Prom 637037 - 637096 5.1 605 349 Tu 1 5/0.252 + CDS 637183 - 638220 1156 ## COG0673 Predicted dehydrogenases and related proteins + Term 638227 - 638279 3.6 + Prom 638233 - 638292 4.5 606 350 Op 1 4/0.512 + CDS 638343 - 639038 888 ## COG1741 Pirin-related protein + Term 639053 - 639086 3.8 + Prom 639045 - 639104 2.8 607 350 Op 2 1/0.906 + CDS 639131 - 640126 897 ## COG1609 Transcriptional regulators + Prom 640155 - 640214 2.0 608 351 Op 1 4/0.512 + CDS 640304 - 640792 540 ## COG3265 Gluconate kinase + Term 640821 - 640858 3.9 609 351 Op 2 . + CDS 640859 - 642136 1616 ## COG2610 H+/gluconate symporter and related permeases + Term 642146 - 642181 5.2 610 352 Tu 1 . - CDS 642193 - 642786 613 ## COG2095 Multiple antibiotic transporter + Prom 642754 - 642813 3.7 611 353 Tu 1 . + CDS 642978 - 644081 1166 ## COG0136 Aspartate-semialdehyde dehydrogenase + Prom 644140 - 644199 3.1 612 354 Op 1 9/0.039 + CDS 644354 - 646540 2663 ## COG0296 1,4-alpha-glucan branching enzyme 613 354 Op 2 7/0.063 + CDS 646537 - 648510 1396 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 614 354 Op 3 17/0.000 + CDS 648528 - 649823 1184 ## COG0448 ADP-glucose pyrophosphorylase 615 354 Op 4 10/0.024 + CDS 649823 - 651256 1254 ## COG0297 Glycogen synthase 616 354 Op 5 . + CDS 651275 - 653722 2814 ## COG0058 Glucan phosphorylase + Term 653817 - 653882 0.2 + Prom 654114 - 654173 5.9 617 355 Op 1 . + CDS 654216 - 654920 544 ## ECS88_3825 Auf fimbriae major fimbrial subunit AufA + Term 654930 - 654979 12.4 618 355 Op 2 10/0.024 + CDS 654994 - 655773 378 ## COG3121 P pilus assembly protein, chaperone PapD 619 355 Op 3 6/0.118 + CDS 655843 - 658404 826 ## COG3188 P pilus assembly protein, porin PapC 620 355 Op 4 4/0.512 + CDS 658404 - 658967 313 ## COG3539 P pilus assembly protein, pilin FimA 621 355 Op 5 7/0.063 + CDS 658918 - 659490 63 ## COG3539 P pilus assembly protein, pilin FimA 622 355 Op 6 7/0.063 + CDS 659435 - 660235 151 ## COG3121 P pilus assembly protein, chaperone PapD 623 355 Op 7 . + CDS 660250 - 661371 180 ## COG3539 P pilus assembly protein, pilin FimA + Prom 661397 - 661456 7.6 624 356 Op 1 . + CDS 661544 - 662254 282 ## ECS88_3818 hypothetical protein 625 356 Op 2 . + CDS 662257 - 663024 414 ## ECS88_3817 hypothetical protein 626 356 Op 3 . + CDS 663027 - 663632 141 ## ECIAI1_3570 hypothetical protein - Term 663640 - 663678 9.1 627 357 Tu 1 . - CDS 663686 - 665191 1679 ## COG0578 Glycerol-3-phosphate dehydrogenase - Prom 665234 - 665293 4.3 + Prom 665220 - 665279 4.1 628 358 Op 1 4/0.512 + CDS 665381 - 665707 479 ## COG0607 Rhodanese-related sulfurtransferase 629 358 Op 2 6/0.118 + CDS 665752 - 666582 844 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 630 358 Op 3 . + CDS 666599 - 667357 859 ## COG1349 Transcriptional regulators of sugar metabolism + Term 667522 - 667556 -1.0 631 359 Tu 1 . - CDS 667339 - 668937 1241 ## COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain - Prom 669009 - 669068 5.8 + Prom 668920 - 668979 3.6 632 360 Op 1 3/0.685 + CDS 669126 - 670352 1357 ## COG1690 Uncharacterized conserved protein 633 360 Op 2 . + CDS 670356 - 671372 871 ## COG0430 RNA 3'-terminal phosphate cyclase + Term 671451 - 671501 3.1 - Term 671370 - 671412 0.3 634 361 Tu 1 . - CDS 671415 - 674120 2392 ## COG2909 ATP-dependent transcriptional regulator - Prom 674145 - 674204 6.1 + Prom 674647 - 674706 2.1 635 362 Op 1 7/0.063 + CDS 674743 - 677136 2596 ## COG0058 Glucan phosphorylase 636 362 Op 2 . + CDS 677146 - 679230 1963 ## COG1640 4-alpha-glucanotransferase + Term 679239 - 679281 9.1 637 363 Tu 1 . - CDS 679275 - 680591 1699 ## COG2610 H+/gluconate symporter and related permeases - Prom 680643 - 680702 4.0 - Term 680852 - 680887 0.7 638 364 Op 1 5/0.252 - CDS 680952 - 681527 728 ## COG0694 Thioredoxin-like proteins and domains 639 364 Op 2 . - CDS 681586 - 682269 256 ## COG1040 Predicted amidophosphoribosyltransferases + Prom 682217 - 682276 2.9 640 365 Tu 1 . + CDS 682307 - 683077 552 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 683275 - 683319 -0.6 641 366 Op 1 . - CDS 683181 - 683279 83 ## 642 366 Op 2 . - CDS 683297 - 684190 747 ## COG5464 Uncharacterized conserved protein - Prom 684307 - 684366 2.5 - Term 684329 - 684366 6.1 643 367 Op 1 . - CDS 684393 - 684629 308 ## ECS88_3797 DNA-binding transcriptional regulator 644 367 Op 2 22/0.000 - CDS 684640 - 686961 2771 ## COG0370 Fe2+ transport system protein B 645 367 Op 3 4/0.512 - CDS 686978 - 687205 256 ## COG1918 Fe2+ transport system protein A - Prom 687310 - 687369 5.4 - Term 687529 - 687561 3.1 646 367 Op 4 1/0.906 - CDS 687645 - 689966 1643 ## PROTEIN SUPPORTED gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein - Prom 690039 - 690098 74.3 647 368 Tu 1 . - CDS 690100 - 690528 625 ## COG0782 Transcription elongation factor - Prom 690610 - 690669 4.9 + Prom 690592 - 690651 11.2 648 369 Op 1 40/0.000 + CDS 690756 - 691475 937 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 649 369 Op 2 . + CDS 691472 - 692824 1231 ## COG0642 Signal transduction histidine kinase + Term 692830 - 692865 4.0 - Term 692818 - 692851 2.0 650 370 Tu 1 . - CDS 692900 - 694522 2122 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) + Prom 694620 - 694679 5.7 651 371 Tu 1 . + CDS 694901 - 696625 1376 ## ECS88_3788 hypothetical protein - Term 696644 - 696679 7.4 652 372 Op 1 3/0.685 - CDS 696688 - 697566 1029 ## COG1281 Disulfide bond chaperones of the HSP33 family 653 372 Op 2 4/0.512 - CDS 697591 - 697992 459 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 654 372 Op 3 . - CDS 698003 - 698671 865 ## COG1011 Predicted hydrolase (HAD superfamily) - Term 698685 - 698731 10.1 655 373 Op 1 . - CDS 698736 - 699026 291 ## E2348C_3642 predicted inner membrane protein 656 373 Op 2 . - CDS 699161 - 700915 1415 ## ECS88_3784 intracellular growth attenuator protein - Prom 701134 - 701193 5.3 + Prom 701093 - 701152 7.0 657 374 Tu 1 . + CDS 701235 - 701795 623 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 701940 - 701965 -0.5 - Term 701920 - 701959 5.3 658 375 Tu 1 . - CDS 701961 - 704513 2442 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein - Prom 704537 - 704596 3.4 + Prom 704501 - 704560 2.0 659 376 Op 1 . + CDS 704633 - 705412 646 ## APECO1_3069 hypothetical protein 660 376 Op 2 . + CDS 705412 - 705951 285 ## COG3166 Tfp pilus assembly protein PilN 661 376 Op 3 . + CDS 705935 - 706375 237 ## ECS88_3778 hypothetical protein 662 376 Op 4 . + CDS 706365 - 706769 236 ## ECS88_3777 hypothetical protein 663 376 Op 5 8/0.039 + CDS 706681 - 707919 1183 ## COG4796 Type II secretory pathway, component HofQ + Term 707999 - 708032 0.6 + Prom 708158 - 708217 3.9 664 377 Op 1 20/0.000 + CDS 708320 - 708841 551 ## COG0703 Shikimate kinase 665 377 Op 2 7/0.063 + CDS 708898 - 709986 889 ## COG0337 3-dehydroquinate synthetase + Term 710002 - 710032 2.7 666 378 Tu 1 6/0.118 + CDS 710078 - 711364 1085 ## COG3266 Uncharacterized protein conserved in bacteria + Term 711405 - 711443 -0.9 + Prom 711551 - 711610 20.1 667 379 Op 1 6/0.118 + CDS 711703 - 712338 501 ## COG0338 Site-specific DNA methylase 668 379 Op 2 9/0.039 + CDS 712356 - 713033 745 ## COG0036 Pentose-5-phosphate-3-epimerase 669 379 Op 3 6/0.118 + CDS 713026 - 713784 1013 ## COG0546 Predicted phosphatases 670 379 Op 4 . + CDS 713777 - 714781 1225 ## COG0180 Tryptophanyl-tRNA synthetase + Term 714802 - 714827 -0.5 + Prom 714789 - 714848 4.2 671 380 Op 1 . + CDS 714941 - 715846 793 ## ECS88_3768 hypothetical protein 672 380 Op 2 . + CDS 715863 - 716225 353 ## UTI89_C3880 hypothetical protein + Prom 716230 - 716289 1.6 673 381 Op 1 2/0.835 + CDS 716309 - 717472 1081 ## COG3457 Predicted amino acid racemase 674 381 Op 2 1/0.906 + CDS 717473 - 718699 1368 ## COG1015 Phosphopentomutase 675 381 Op 3 . + CDS 718696 - 719574 915 ## COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold 676 381 Op 4 . + CDS 719585 - 719938 557 ## S4366 hypothetical protein 677 381 Op 5 . + CDS 719950 - 721254 1385 ## ECS88_3762 hypothetical protein 678 381 Op 6 . + CDS 721266 - 722351 747 ## ECS88_3761 hypothetical protein - Term 722381 - 722417 2.0 679 382 Tu 1 . - CDS 722459 - 722626 251 ## ECO111_4179 hypothetical protein - Prom 722660 - 722719 7.2 - Term 722839 - 722868 2.1 680 383 Op 1 3/0.685 - CDS 722878 - 724251 1285 ## COG0007 Uroporphyrinogen-III methylase 681 383 Op 2 3/0.685 - CDS 724270 - 725076 988 ## COG2116 Formate/nitrite family of transporters - Prom 725099 - 725158 10.7 - Term 725162 - 725200 12.1 682 384 Op 1 14/0.016 - CDS 725238 - 725564 438 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 683 384 Op 2 4/0.512 - CDS 725561 - 728104 3038 ## COG1251 NAD(P)H-nitrite reductase - Prom 728197 - 728256 5.0 - Term 728319 - 728357 6.1 684 385 Tu 1 . - CDS 728366 - 729547 1312 ## COG0477 Permeases of the major facilitator superfamily - Prom 729654 - 729713 5.8 + Prom 729679 - 729738 5.1 685 386 Tu 1 . + CDS 729817 - 730389 574 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Prom 730412 - 730471 6.5 686 387 Op 1 . + CDS 730501 - 730668 135 ## b3362 predicted protein 687 387 Op 2 4/0.512 + CDS 730658 - 731260 628 ## COG2184 Protein involved in cell division 688 387 Op 3 5/0.252 + CDS 731292 - 731855 523 ## COG0512 Anthranilate/para-aminobenzoate synthases component II + Prom 731857 - 731916 7.7 689 387 Op 4 . + CDS 731941 - 733161 1327 ## COG4992 Ornithine/acetylornithine aminotransferase + Term 733186 - 733227 4.1 - Term 733173 - 733213 4.6 690 388 Op 1 4/0.512 - CDS 733228 - 735318 1586 ## COG1289 Predicted membrane protein - Term 735320 - 735357 8.2 691 388 Op 2 . - CDS 735369 - 736001 894 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 736146 - 736205 3.0 692 389 Tu 1 . + CDS 736303 - 736707 426 ## COG1765 Predicted redox protein, regulator of disulfide bond formation + Term 736718 - 736773 2.7 - Term 736655 - 736686 -0.8 693 390 Tu 1 6/0.118 - CDS 736762 - 737631 840 ## COG3954 Phosphoribulokinase 694 391 Op 1 5/0.252 - CDS 737685 - 737903 326 ## COG3089 Uncharacterized protein conserved in bacteria 695 391 Op 2 3/0.685 - CDS 737897 - 738859 911 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold 696 391 Op 3 . - CDS 738919 - 740832 2432 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 740936 - 740995 3.4 + Prom 740822 - 740881 4.7 697 392 Op 1 7/0.063 + CDS 740963 - 741514 418 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 698 392 Op 2 3/0.685 + CDS 741514 - 743319 1057 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 699 392 Op 3 4/0.512 + CDS 743329 - 743529 195 ## COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain + Term 743567 - 743608 0.7 + Prom 743536 - 743595 3.9 700 392 Op 4 . + CDS 743624 - 744214 746 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 + Term 744224 - 744274 9.1 - Term 744211 - 744259 10.2 701 393 Tu 1 . - CDS 744263 - 744481 309 ## COG2900 Uncharacterized protein conserved in bacteria - Prom 744589 - 744648 3.3 + Prom 744551 - 744610 3.4 702 394 Tu 1 . + CDS 744702 - 745514 1034 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Term 745594 - 745618 -1.0 + Prom 745529 - 745588 12.5 703 395 Op 1 6/0.118 + CDS 745690 - 746412 741 ## COG2964 Uncharacterized protein conserved in bacteria 704 395 Op 2 13/0.016 + CDS 746412 - 746798 379 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction 705 395 Op 3 10/0.024 + CDS 746798 - 747157 292 ## COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur 706 395 Op 4 7/0.063 + CDS 747164 - 747451 307 ## COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur 707 395 Op 5 56/0.000 + CDS 747517 - 747951 744 ## PROTEIN SUPPORTED gi|226956878|ref|YP_002807671.1| 30S ribosomal subunit protein S12 + Prom 747960 - 748019 2.1 708 395 Op 6 51/0.000 + CDS 748048 - 748518 777 ## PROTEIN SUPPORTED gi|15803854|ref|NP_289888.1| 30S ribosomal protein S7 + Term 748544 - 748579 3.1 + Prom 748532 - 748591 1.6 709 395 Op 7 30/0.000 + CDS 748615 - 750729 2250 ## COG0480 Translation elongation factors (GTPases) 710 395 Op 8 . + CDS 750800 - 750931 176 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|296918667|gb|GG773033.1| GENE 1 2 - 1480 1202 492 aa, chain + ## HITS:1 COG:all2645_2 KEGG:ns NR:ns ## COG: all2645_2 COG1020 # Protein_GI_number: 17230137 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 1 450 874 1300 1356 245 34.0 2e-64 KVNGYRIELGEIERCIARHPDVEQSVVVAVGNSQHRRLVAFAKLHDRHQAQALQAKEAEA AALAQGIIVNPAQRLAFKLKEPHIRALDGLGIALTAPADSTRYIKRRSYRHFSAQKTTLA QLGQLLSGLGQMRLPGLPFAKYAYASAGGLYPVQTYVYLHPDKIEEGVSGIYYFDPRQSC LMPVAPEVELNSGFHAGPNQSIADRAAFTLFMVADMAVISPFYGQEAAWHFSVMEAGTLC HLLEEDAPRYGLGLCQLGMADFSAVASHFQLSPHHRYVHCTVGGAIGQEAASAAALLRDF STYEKPKETAAPLDMQSYKDAMLRGLRQQLPDYMVPSDLMLATDFPLTANGKLDRQKLQL QGEQIAHQRDGVGPIQVDSALQQRLVALWQEVLGVSHVSAEDDFFSLGGSSIELVRIQQA LEAIIGQEIPIVDLFRLPTIADVARYLDEQLHNLPAAHDIVLAQAEVSQVSAARENLALR RKRAQQGEKGDE >gi|296918667|gb|GG773033.1| GENE 2 1473 - 2936 810 487 aa, chain + ## HITS:1 COG:MT3264 KEGG:ns NR:ns ## COG: MT3264 COG0154 # Protein_GI_number: 15842752 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Mycobacterium tuberculosis CDC1551 # 5 484 10 491 493 204 35.0 4e-52 MSEQSYRSAGTLLAQLASGETTSVALVNHYFSRMAQFNKPLNAVVQQHYALALEAAARAD RERLEGRARGVLHGLPCTVKESFDVQGWLTTSGAHYLKDNRATQDAPSIARLRAAGAILM GKTNVPMMTADWQTYNDLYGTTHNLWDRQRSPGGSSGGAAVAVAADFTPVEFGSDLFGSL RIPAHYTGVYAHRCSLGLMSVRGHVPGGGPQATDEPDLSTAGPMARSAADLRLMMRALST FWVEPPRIPDFSRYQAKANYRVCTWFSAPHHEIDQQIAQRFQSFIDKLRAQPGVEVDDAM PADIDPDALFDIAVKLSGRLVSTALNGRQRLTAGLAALGFRLVGKLADVPEGITSYYQGM LKDSGEQRNTDKLRHEYSRVIETLFARYDVLLTPVSPVLAFAHMQQPVRKRKLIVNGEPQ DYNEHLFWNMLATVFGLPATVYPLAKTMDELPCGIQIISGHFHDDVTINFAEFCESISGG FTVPEGY >gi|296918667|gb|GG773033.1| GENE 3 2998 - 4437 1415 479 aa, chain + ## HITS:1 COG:CAC0883 KEGG:ns NR:ns ## COG: CAC0883 COG0534 # Protein_GI_number: 15894170 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 28 424 12 408 448 151 26.0 3e-36 MTVNKLEPDNGTPNDELFTVAGMFDGSLYKLLLRMALPMFVGMLTQVTYAIADIFWLSHI DVTNSGIIAGVGLVFPVGMGLFAIANGIQIGMGSLLSRAIGMQRLDRAQRILSVGIIIAL FFAIVITVLGYVYAQPLLRSLGATKSIIGYATEFYYYSLLTVFSIMLIGVMMGLFQGAGK IMVIMKASLLGALVNIMLDPIMIFVFDFGVKGVALASFLAQLSMVAYFIYTLMGLHIGLS IRIALRPFSWKIYREFLSVGMAQMLMQLIIAVGIVIYNFFIVRLDVNAMAAFTLTGRIDY FIITPMLAIATALLTVVGQNWGHGNVTRTLNAYWAAVALAFSIVLVLAVMHIVLAPWMYP LFTRVVAVSDYAVLQTRIMALALPFVAISLLASEYYQAIGKPWYSVLLTLMRHVFISVPV VYLLAIVLEMRITGVYFGAMSGTFVAALLAWRLLRLSPRLLRWNQEAVRSQHLDMEVAP >gi|296918667|gb|GG773033.1| GENE 4 4434 - 8801 1487 1455 aa, chain + ## HITS:1 COG:all2649 KEGG:ns NR:ns ## COG: all2649 COG1020 # Protein_GI_number: 17230141 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 6 1362 51 1470 1583 365 25.0 1e-100 MMSGNPLSWPQEQCHIIDQLYPYSAVNIIGGVVTIEGIVDLPRLHAAIQSAIRQFDALRM WFVMGEESEVVSQVQPYHWRDIRHLTFSPDYDKENLRPAAIETFVDEWFRQPFTLLAHDL FEFVTFTCGEQYSGYLFKAHHGIADGWSMALLSNHVKRAYEQQDVPDDASPAYSAFLAQQ QSYQASTRFAVDRGWWRDYIDEYRDCFPDSSPIVTTEGISCSTWLEPAMINRLYRLCNRY GCTLNTLFIALFALYRARVWGEEKGVIGVPLANRHTREARRCFGMFTNQLPLAYRLVRTE RFCERVAFFQRELKRGFKHSKYPITLFNQDLAEQGGGKLRAFDYCVNYYNFTYERHIAGA AQRVESYYSGEQSYKLQIVLQTVNNHKESLRLSLEALRSAFTPHQLTAMKNGLLDLVTAL DRQPDARLGDLEVYPAPHVALACGSLKPSFTSRFAAQVVEHGDRTALIDNEQSLTYRQLD DAVERVARYLRQQGIGRGQVVGIIAEHSAQTVMVIYGILRCGAAFLPLNPALPTTRLYAM CRKAQVAHILYDPAMHELTQALAFPASSLLQALATSALAREPWPAIEPQDLAYVLFTSGS TGEPKGVQVSHGNLANYLHFAAERYFTAQDRAALYSSLSFDLTITTLFAPLCVGASISVC RHAESETLLRMAVVDQPNTVIKLTPAHLRLLCAAGISSEQIRTLVVGGEDFKRDLARKAA ALFPQAVIYNEYGPTEATVGCMIYRYTGQETLPSLPIGMAIDGCQVAICSPWGCPVPEGE TGELVIYGASVTQGYIDAPQQTAAAYLKDTNGVMIGYRSGDIGYAIAPNTLVYQGRKDDQ VKINGYRIELCEIEQALLSAPQVESAAVAVIDDVQGQHSGLLACVTPSSVDVATVMQHLR QQLPTYMQPKQCCAIAQLPLSHNGKVDVRQMVATVRNTAPASGSERLGDAAIRHSVRVCV EGALEQTEFDDNENLYVLGLDSIKSIQIAAQLRHHGWTMSAVQVMECGTVNAICEFLASH TTVSQLAQYAHNTRIDLPALRWFTQLALPVPNVYNHVIVLKVLPGCPLEQLHNRLHTLIQ QQPALHSALDAEGRLLVCDPNVCYPNEVLTEYSTAQWTLAEVIAQCNSMLDVTNGRVFTA ALLHAPQPASSTLVLCAHHLCVDMHSWYLILSTLDAVSTVNGTSNSGLHRWNDYLASKTV DSATHESWRTVCQTLPLHFPPVSLPDDSLPRTRAWREDFRHPCVRRLFESSGNTAYSAET YVLTALALVLRYYSEEPWCRIEMEGMGRGCWPDEPDVADTVGWFTLFYPWAIPLHGDMAT LLSAIASDLAKRTHGGGDYGLLQMRHAPEDSLAQGIRMNYIGVQAQPSLRYFHIDHFNSD IYTAPENALGCVLEFNIARSAADGLSFHCRFDPTRIALNDVQLLLARYKNSLTDLDAWLC QHSATLTGAPTLWTL >gi|296918667|gb|GG773033.1| GENE 5 8832 - 11291 1176 819 aa, chain + ## HITS:1 COG:all2635 KEGG:ns NR:ns ## COG: all2635 COG3321 # Protein_GI_number: 17230127 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Polyketide synthase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 10 555 36 596 1565 353 37.0 7e-97 MAKDDFTCGSLDIAIIGMSGRFSGAESVPEWWDKLLAGEEFTQPTCTEDDNGNPWIRLRN IITAPYDFDAAFFNIPPGEALLMDPQQRIFLECCYNALEHAGYIPTQLKRVGVYGATYAN NYFIDRVYPYLKMSGDHHYLQAQIGNEKDYLCAQVAYKLGFTGPAVSVQTACSSSLVAAY LACEGLLTFQADVALAGGVTLGFLQAHGYSPQGDKLVSQDGHCAPFSAEATGTVYSSGAG VVVLKRLEDALRDQDRVYAVIKGGAVNNDGGRRLGFVAPSVEGQVEAINTALAAAEVVPT DIALIETHGTGTPLGDEIELEALHRVFAPACAPHSIQLGAVKANLGHLGVASGIVSLMKT ALTLYTGLVPPQINLVNKHKKLLQPASPFYLSDVVTSVPQTKRIHATVSSFGLGGTNAHL VLQNWCETPAQAVQENERRLFFFSAKTPLALRQQLDAHYHALATYAEADKDRIAYTLAQR RAHFPYRCALAADSVVALRASLAKLRDADMSFTPINMETTLVFLYPDRDDKLESALTHLL ACQPNLRQRHQRLSQDVAQICEPADWTPALRQFIQQVSLSEWLIEQSISPVQHIGYLTGA AAAQYVARIISLENAVQQVIVAETTPEQTLAGNSELSEILANLAVTEGTLMLEIGRAGTF SILYHQHAQWVGQTVFSPMLNTDTPEDILPLLGTLWQRGVTICLPEMPAVQTIGLPGYSF DRVRYEIQSSDARENAMLPVSYLSVSDFVEKTWRSLLCIDHYDEHAVIFEYGATSMHVIS FVDSCNHIYKIGLTAADIYARPAIREHSEFISECVDGIL >gi|296918667|gb|GG773033.1| GENE 6 11313 - 12818 612 501 aa, chain + ## HITS:1 COG:SA2230 KEGG:ns NR:ns ## COG: SA2230 COG1680 # Protein_GI_number: 15928020 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Staphylococcus aureus N315 # 38 496 41 494 498 180 28.0 5e-45 MEHVSIKTLYHLLCCMLLFISAMCALAQEHEPIGAQDERLSTLIHQRMQEAKVPALSVSV TIKGVRQRFVYGVADVASQKANTLDTVYELGSMSKAFTGLVVQILIQEGRLRQGDDIITY LPEMRLNYQGKPASLTVADFLYHTSGLPFSTLARLENPMPGSAVAQQLRNENLLFAPGAK FSYASANYDVLGAVIENVTGKTFTEVIAERLTQPLGMSATVAVKGDEIIVNKASGYKLGF GKPVLFHAPLARNHVPAAYIHSTLPDMEIWIDAWLHRKALPATLREAMSNSWRGNSDVPL AADNRILYASGWFIDQNQGPYISHGGQNPNFSSCIALRPDQQIGIVALANMNSNLILQLC ADIDNYLRIGKYADGAGDAITATDTLFVYLTLLLCFWGAVVVVRGAFRVYRATAHGPGKQ QRLRLRVRDYIIALAVPGLVAAMLYVAPGILSPGLDWRFILVWGPSSVLAIPFGIILLAF VLTLNHQIKRILLHNKEWDDE >gi|296918667|gb|GG773033.1| GENE 7 12811 - 13533 435 240 aa, chain + ## HITS:1 COG:alr2045 KEGG:ns NR:ns ## COG: alr2045 COG3208 # Protein_GI_number: 17229537 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted thioesterase involved in non-ribosomal peptide biosynthesis # Organism: Nostoc sp. PCC 7120 # 1 233 20 253 253 136 33.0 3e-32 MSNISLYCLPYSGGSAAMYYKWRSVLSDNITLRPLEPAGRGTRIRQPLCLTMVDAVADLY QQFVKHYTGGDYAIFGHSLGGIMAFELVHYILDHGHDMPCALFFSGCRPPDRASHEVILH TLPDQAFMEEIVKLGGTPVDVFRNKELMTIFTPIIKNDYRLYEQYVFQAKARTLTCPIVL FHGDADNLVMQDELLAWEKFTTRKTRTIIFPAADHFFVDKHFEQVVGYVNQTIESLEIVG >gi|296918667|gb|GG773033.1| GENE 8 13568 - 14080 394 170 aa, chain + ## HITS:1 COG:SP0939 KEGG:ns NR:ns ## COG: SP0939 COG4283 # Protein_GI_number: 15900819 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 166 1 169 172 66 29.0 3e-11 MAVPSSKEELIKAINSNFSLLNKKLESITPQLAFEPLLEGHAKGTTISVANLVSYLIGWG ELVLHWHDQEAKGKTIIFPEEGFKWNELGRLAQKFYRDYEDITEYEVLLARLKENKQQLV ALIERFSNDELYGKPWYNKWTRGRMIQFNTASPYKNASGRLNKLQKCLAE >gi|296918667|gb|GG773033.1| GENE 9 14110 - 14319 82 69 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C2205 NR:ns ## KEGG: UTI89_C2205 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 67 16 82 97 127 100.0 2e-28 MIFPGSDECGLAALSPAAPEHILVNDTDKMCKTISLLNISTCERMCIKNHDVLDDLEDEK RPVDEKPAS >gi|296918667|gb|GG773033.1| GENE 10 14382 - 15653 389 423 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 35 401 43 401 406 154 28 7e-36 MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS LSDARQQREGIRKMLALNINPAQQRAAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRV LARLNRHVFPTIGHLPVTELKSRHFIELLKGIEEKGLLEVASRSRQHLSNIMRYAVHQGL IEINPAANLDGVTASPARRHYPTLPLERLPELLERIDSYHQGRELTRLAVLLTLHVFIRS SELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKE ISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGLWSQ DAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLDMCSEIWVPPYIWSQQNINL AVT >gi|296918667|gb|GG773033.1| GENE 11 15991 - 17445 927 484 aa, chain - ## HITS:1 COG:yeeO KEGG:ns NR:ns ## COG: yeeO COG0534 # Protein_GI_number: 16129928 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 1 484 64 547 547 872 99.0 0 MNISSALRQVVHGTRWHSKRKSYKVLFWREITPLAVPIFMENACVLLMGVLSTFLVSWLG KDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLGKRDRRRARVATRQSLVIMTLFAV LLATLIHHFGEQIIDFVAGDATTDVKALALTYLELTVLSYPAAAITLIGSGALRGAGNTK IPLLINGSLNILNIIISGILIYGLFSWPGLGFVGAGLGLTISRYIGAVAILWVLAIGFNP ALRISLKSYFKPLNFSIIWEVMGIGIPASVESVLFTSGRLLTQMFVAGMGTSVIAGNFIA FSIAALINLPGSALGSASTIITGRRLGVGQIAQAEIQLRHVFWLSTLGLTAIAWLTAPFA GVMASFYTQDPQVKHVVVILIWLNALFMPIWSASWVLPAGFKGARDARYAMWVSMLSMWG CRVVVGYVLGIMLGWGVVGVWMGMFADWAVRAVLFYWRMVTGRWLWKYPRSEPQKCEKKP VVSE >gi|296918667|gb|GG773033.1| GENE 12 17752 - 18630 761 292 aa, chain - ## HITS:1 COG:ECs2783 KEGG:ns NR:ns ## COG: ECs2783 COG0583 # Protein_GI_number: 15832037 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 292 25 316 316 564 98.0 1e-161 MLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLA DLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEAD IGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRQGITGR SRIDDAFARKGLPADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEKNLIRLDTRHL FDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKRQVMENSEEEIDYQI >gi|296918667|gb|GG773033.1| GENE 13 18804 - 19721 364 305 aa, chain - ## HITS:1 COG:nac KEGG:ns NR:ns ## COG: nac COG0583 # Protein_GI_number: 16129930 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 305 1 305 305 530 98.0 1e-150 MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIRTKRGVTPTGA GKILYTHARAILRQCEQAQLAVHNVGQSLSGQVSIGFAPGTAASSITMPLLQAVRAEFPE VVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLREDLFLVGTQDCPGQSVD VNAIAQMNLFLPSDYSAVRLRVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGVAVLPE SAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANLSPQAQAVKELLMSVISSPVMEKRQ WQLVS >gi|296918667|gb|GG773033.1| GENE 14 20577 - 21293 697 238 aa, chain - ## HITS:1 COG:yeeN KEGG:ns NR:ns ## COG: yeeN COG0217 # Protein_GI_number: 16129927 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 238 1 238 238 441 100.0 1e-124 MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVP KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGN IGAAGSVSYMFDNTGVIVFKGTDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKG IAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL >gi|296918667|gb|GG773033.1| GENE 15 21636 - 23090 1208 484 aa, chain - ## HITS:1 COG:ECs2779 KEGG:ns NR:ns ## COG: ECs2779 COG0775 # Protein_GI_number: 15832033 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Escherichia coli O157:H7 # 1 484 1 484 484 995 99.0 0 MNNKGSGLTPAQALDKLDALYEQSVVALRNAIGKYITSGELPDENARKQGLFVYPSLTVT WDGSTTNPPKTRAFGRFTHAGSYTTTITRPTLFRSYLNEQLTLLYQDYGAHISVQPSQHE IPYPYVIDGSELTLDRSMSAGLTRYFPTTELAQIGDETADGIYHPTEFSPLSHFDARRVD FSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGNWIT AETEAPEEAISDLAWKKHQMPAWHLITADGRGITLVNIGVGPSNAKTICDHLAVLRPDVW LMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKLVSG RPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESATIAAQGYRFRVPY GTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNE PPFR >gi|296918667|gb|GG773033.1| GENE 16 23232 - 24548 1013 438 aa, chain - ## HITS:1 COG:ECs2778 KEGG:ns NR:ns ## COG: ECs2778 COG0477 # Protein_GI_number: 15832032 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 438 1 438 438 806 99.0 0 MDSTLISTRPDEGTLSLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA MGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTI GWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGL VSLISMMTTDEQFLSWGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHNQAAAKKRIP VIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNMGLPRELFLNIGLLVGGLSC LTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMV VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALITYFAGNWHSVAIYLLA GCLISAMTALLMKDNQRA >gi|296918667|gb|GG773033.1| GENE 17 24863 - 25915 255 350 aa, chain + ## HITS:1 COG:ECs2777 KEGG:ns NR:ns ## COG: ECs2777 COG0859 # Protein_GI_number: 15832031 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 1 350 1 350 350 654 96.0 0 MFLVSLLRRIAFSYYDYKAYNFNIEKTDFVVIHIPDQIGDAMAIFPVIRALELHKIKHLL IVTSTINLEVFNALKLEQTKLTLVTMTMQDHATLKEIKDLAKNITLQYGTPDLCIEAMRK KNLKTMIFISQLKAKTNFQVVGLTMKCYSPLCKNASRMDQNLRTPVPMTWAFMMREAGFP AVRSIYELPLSDDVLDEVREEMRSLGSYIALNLDGSSQERTFSLSIAENLIAKIQSETDI PIVIVYGPKGEDKARALVDCYNNVYRLSLSPSIKRSAAIIKDAYIAITPDTSILHMASAY NTPVVAIYADYKTRWPAMADVSESVVVGQKIDNISLDEFAKALKSVLARI >gi|296918667|gb|GG773033.1| GENE 18 26043 - 26519 212 158 aa, chain - ## HITS:1 COG:no KEGG:ECP_1951 NR:ns ## KEGG: ECP_1951 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 158 1 158 158 261 100.0 9e-69 MQSGTNVPYMKISAIDYSQNINGDYKATVTGGGEGIATLIPVLNGVHQAGLSTTIEFISA ETRPMTGTVSVNSANLPTASFPSQGFTGAYYQLNNDNFAPGKTAADYSFSSSASWVGVDA TGKVTFKNDGDSNTVIITAPPRSGGAIYQTVPPESRSV >gi|296918667|gb|GG773033.1| GENE 19 26532 - 27887 350 451 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1065 NR:ns ## KEGG: APECO1_1065 # Name: not_defined # Def: putative autotransporter # Organism: E.coli_APEC # Pathway: not_defined # 1 451 39 489 652 654 99.0 0 MVGGKSEQLVVNFTADTLTAQVNLNVTEDNFIANNIGMTRLQATVTDGNGNPVEGIKVNF RGTSVTLSSTSVETDDQVFAEILVTSTEVGLKTVSASLADKPTEVISRLLNAKVDVNSAT ITSQEIPEGQVMVAQDIAVKAHVNDQFGNPVTHQPATFSAAPSSQMIISQNTVSTNTQGV AEVTMTPERNGSYTVKASLANGASLEKQLEAIDEKLTLTSSPLIGVNAPKGATLTATLTS ANGTPVEGQVINFSVTLEGATLSGGKVRTNSSGQAPVVLTSNKVGTYTVTASFHNGVTIQ TQTTVKVTGNPSTAHVASFIADPSTIAATNSDLSTLKATVEDGSGNLIEGPTVYFALKSG STTLTSLTAVTDQNGIATTSVKGEITGSVTVSAVTSAGGMQTVDISLVAGPADASQSILK NNQSSLKGDFTDSAELHLVLHDISGNPIKVS >gi|296918667|gb|GG773033.1| GENE 20 28037 - 28207 65 56 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1068 NR:ns ## KEGG: ECIAI39_1068 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 56 1 56 56 76 100.0 3e-13 MTATLENGDSMQQTVNYVPNVTNAEITLAASKDPVIADNNDLTTLTAPSLIQRAMR >gi|296918667|gb|GG773033.1| GENE 21 28134 - 28883 446 249 aa, chain - ## HITS:1 COG:no KEGG:c2437 NR:ns ## KEGG: c2437 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 249 20 268 268 517 100.0 1e-145 MSKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVI LKKIQTFNGKIKFRQFVGDLLDKLCMLDRDGFIYGQNLRLCTEARYICPVQQIIDTPLLR KLNQFRTFVRNVRPGDELDVPAQVSEKNLTPPPGNSSGNLEQQIASTSQLIGSLLAEDMN SEQAANIARGWASSQASGVMTDWLSRFGTARITLGVDEDFSLKNSRDGNPRKWRFDATNS ELCAERHEC >gi|296918667|gb|GG773033.1| GENE 22 29530 - 31551 1694 673 aa, chain - ## HITS:1 COG:YPO1906 KEGG:ns NR:ns ## COG: YPO1906 COG1629 # Protein_GI_number: 16122154 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Yersinia pestis # 1 673 1 673 673 1277 99.0 0 MKMTRLYPLALGGLLLPAIANAQTSQQDESTLVVTASKQSSRSASANNVSSTVVSAPELS DAGVTASDKLPRVLPGLNIENSGNMLFSTISLRGVSSAQDFYNPAVTLYVDGVPQLSTNT IQALTDVQSVELLRGPQGTLYGKSAQGGIINIVTQQPDSTPRGYIEGGVSSRDSYRSKFN LSGPIQDGLLYGSVTLLRQVDDGDMINPATGSDDLGGTRASIGNVKLRLAPDDQPWEMGF AASRECTRATQDAYVGWNDIKGRKLSISDGSPDPYMRRCTDSQTLSGKYTTDDWVFNLIS AWQQQHYSRTFPSGSLIVNMPQRWNQDVQELRAATLGDARTVDMVFGLYRQNTREKLNSA YDMPTMPYLSSTGYTTAETLAAYSDLTWHLTDRFDIGGGVRFSHDKSSTQYHGSMLGNPF GDQGKSNDDQVLGQLSAGYMLTDDWRVYTRVAQGYKPSGYNIVPTAGLDAKPFVAEKSIN YELGTRYETADVTLQAATFYTHTKDMQLYSGPVGMQTLSNAGKADATGVELEAKWRFAPG WSWDINGNVIRSEFTNDSELYHGNRVPFVPRYGAGSSVNGVIDTRYGALMPRLAVNLVGP HYFDGDNQLRQGTYATLDSSLGWQATERMNISVYVDNLFDRRYRTYGYMNGSSAVAQVNM GRTVGINTRIDFF >gi|296918667|gb|GG773033.1| GENE 23 31702 - 33279 1103 525 aa, chain - ## HITS:1 COG:YPO1907 KEGG:ns NR:ns ## COG: YPO1907 COG1021 # Protein_GI_number: 16122155 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Peptide arylation enzymes # Organism: Yersinia pestis # 1 525 1 525 525 1036 100.0 0 MNSSFESLIEQYPLPIAEQLRHWAARYASRIAVVDAKGSLTYSALDAQVDELAAGLSSLG LRSGEHVIVQLPNDNAFVTLLFALLRLGVIPVLAMPSQRALDIDALIELAQPVAYVIHGE NHAELARQMAHKHACLRHVLVAGETVSDDFTPLFSLHGERQAWPQPDVSATALLLLSGGT TGTPKLIPRRHADYSYNFSASAELCGISQQSVYLAVLPVAHNFPLACPGILGTLACGGKV VLTDSASCDEVMPLIAQERVTHVALVPALAQLWVQAREWEDSDLSSLRVIQAGGARLDPT LAEQVIATFDCTLQQVFGMAEGLLCFTRLDDPHATILHSQGRPLSPLDEIRIVDQDENDV APGETGQLLTRGPYTISGYYRAPAHNAQAFTAQGFYRTGDNVRLDEVGNLHVEGRIKEQI NRAGEKIAAAEVESALLRLAEVQDCAVVAAPDTLLGERICAFIIAQQVPTDYQQLRQQLT RMGLSAWKIPDQIEFLDHWPLTAVGKIDKKRLTALAVDRYRHSAQ >gi|296918667|gb|GG773033.1| GENE 24 33283 - 34071 134 262 aa, chain - ## HITS:1 COG:YPO1908 KEGG:ns NR:ns ## COG: YPO1908 COG3208 # Protein_GI_number: 16122156 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted thioesterase involved in non-ribosomal peptide biosynthesis # Organism: Yersinia pestis # 1 262 6 267 267 517 99.0 1e-147 MCIPLWPARNGNTAHLVMCPFAGGSSSAFRHWQAEQLADCALSLVTWPGRDRLRHLEPLR SITQLAALLANELEASVSPDTPLLLAGHSMGAQVAFETCRLLEQRGLAPQGLIISGCHAP HLHSERQLSHRDDADFIAELIDIGGCSPELRENQELMSLFLPLLRADFYATESYHYDSPD VCPPLRTPALLLCGSHDREASWQQVDAWRQWLSHVTGPVVIDGDHFYPIQQARSFFTQIV RHFPHAFSAMTAWQKQPSTSER >gi|296918667|gb|GG773033.1| GENE 25 34083 - 35183 585 366 aa, chain - ## HITS:1 COG:YPO1909 KEGG:ns NR:ns ## COG: YPO1909 COG4693 # Protein_GI_number: 16122157 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Oxidoreductase (NAD-binding), involved in siderophore biosynthesis # Organism: Yersinia pestis # 1 366 1 366 366 700 99.0 0 MMPSASPKQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTS PEQITRMPDIACIVVRSTVAGGTGTQLARHFLTRGVHVIQEHPLHPDDISSLQTLAQEQG CCYWVNTFYPHTRAGRTWLRDAQQLRRCLAKTPPVVHATTSRQLLYSTLDLLLLALGVDA AAVECDVVGSFSDFHCLRLFWPEGEACLLLQRYLDPDDPDMHSLIMHRLLLGWPEGHLSL EASYGPVIWSSSLFVADHQENAHSLYRRPEILRDLPGLTRSAAPLSWRDCCETAGPEGVS WLLHQLRSHLAGEHPPAACQSVHQIALSRLWQQILRKTGNAEIRRLTPPHHDRLAGFYND DDKEAL >gi|296918667|gb|GG773033.1| GENE 26 35180 - 44347 5684 3055 aa, chain - ## HITS:1 COG:YPO1910_1 KEGG:ns NR:ns ## COG: YPO1910_1 COG3321 # Protein_GI_number: 16122158 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Polyketide synthase modules and related proteins # Organism: Yersinia pestis # 1 1803 109 1911 1911 3511 99.0 0 MDPQQRLFLQAVWHALEHAGYAPGAVPHKTGVFASSRMSTYPGREALNVTEVAQVKGLQS LMGNDKDYIATRAAYKLNLHGPALSVQTACSSSLVAVHLACESLRAGESDMAVAGGVALS FPQQAGYRYQPGMIFSPDGHCRPFDASAEGTWAGNGLGCVVLRRLRDALLSGDPIISVIL SSAVNNDGNRKVGYTAPSVAGQQAVIEEALMLAAIDDRQVGYIETHGTGTPLGDAIEIEA LRNVYAPRPQDQRCALGSVKSNMGHLDTAAGIAGLLKTVLAVSRGQIPPLLNFHTPNPAL KLEESPFTIPVSAQAWQDEMRYAGVSSFGIGGTNCHMIVASLPDALNARLPNTDSGRKST ALLLSAASDSALRRLATDYAGALRENADASSLAFTALHARRLDLPFRLAAPLNRETAEAL SAWAGEKSGAQVYSGHGASGKQVWLFTGQGSHWRTMGQTMYQHSTAFADTLDRCFSACSE MLTPSLREAMFNPDSAQLDNMAWAQPAIVAFEIAMAAHWRAEGLKPDFAIGHSVGEFAAA VVCGHYTIEQVMPLVCRRGALMQQCASGAMVAVFADEDTLMPLARQFELDLAANNGTQHT VFSGPEARLAVFCATLSQHDINYRRLSVTGAAHSALLEPILDRFQDACAGLHAEPGQIPI ISTLTADVIDESTLNQADYWRRHMRQPVRFIQSIQVAHQLGTRVFLEMGPDAQLVACGQR EYRDNAYWIASARRNKEASVVLNQALLQLYAAGVALPWADLLAGDGQRIAAPCYPFDTER YWKERVSPACEPADAALSAGLEVASRAATALDLPRLEALKQCATRLHAIYVDQLVQRCTG DAIENGVDAMTIMRRGRLLPRYQQLLQRLLNNCVVDGDYRCTDGRYVRARPIEHQQRESL LTELAGYCEGFQAIPDTIARAGDRLYEMMSGAEEPVAIIFPQSASDGVEVLYQEFSFGRY FNQIAAGVLRGIVQTRQPRQPLRILEVGGGTGGTTAWLLPELNGVPALEYHFTDISALFT RRAQQKFADYDFVKYSELDLEKEAQSQGFQAQSYDLIVAANVIHATRHIGRTLDNLRPLL KPGGRLLMREITQPMRLFDFVFGPLVLPLQDLDAREGELFLTTAQWQQQCRHAGFSKVAW LPQDGSPTAGMSEHIILATLPGQAVSAVTFTAPSEPVLGQALTDNGDYLADWSDCAGQPE RFNARWQEAWRLLSQRHGDALPVEPPPVAAPEWLGKVRLSWQNEAFSRGQMRVEARHPAG EWLPLSPAEPLPAPQTHYQWRWTPLNVASIDHPLTFSFSAGTLARSDELAQYGIIHDPHA SSRLMIVEESEDTLALAEKVIAALTASAAGLIVVTRRAWRVEENEALSASHHALWALLRV AANEQPERLLAAIDLAENTPWETLHQGLSAVSLSQRWLAARGDTLWLPSLSPNTGCAAEL PANVFTGDSRWHLVTGAFGGLGRLAVNWLREKGARRIALLAPRVDESWLRDVEGGQTRVC RCDVGDAGQLATVLDDLAANGGIAGAIHAAGVLADAPLQELDDHQLAAVFAVKAQAASQL LQTLRNHDGRYLILYSSAAATLGAPGQSAHALACGYLDGLAQQFSTLDAPKTLSVAWGAW GESGRAATPEMLATLASRGMGALSDAEGCWHLEQAVMRGAPWRLAMRVFTDKMPPLQQAL FNISATEKAATPVIPPADDNAFNGSLSDETAVMAWLKKRIAVQLRLSDPASLHPNQDLLQ LGMDSLLFLELSSDIQHYLGVRINAERAWQDLSPHGLTQLICSKPEATPAASQPEVLRHD ADERYAPFPLTPIQHAYWLGRTHLIGYGGVACHVLFEWDKRHDEFDLAILEKAWNQLIAR HDMLRMVVDADGQQRILATTPEYHIPRDDLRALSPEEQRIALEKRRHELSYRVLPADQWP LFELVVSEIDDCHYRLHMNLDLLQFDVQSFKVMMDDLAQVWRGETLAPLAITFRDYVMAE QARRQTSAWHDAWDYWQEKLPQLPLAPELPVVETPPETPHFTTFKSTIGKTEWQAVKQRW QQQGVTPSAALLTLFAATLERWSRTTTFTLNLTFFNRQPIHPQINQLIGDFTSVTLVDFN FSAPVTLQEQMQQTQQRLWQNMAHSEMNGVEVIRELGRLRGSQRQPLMPVVFTSMLGMTL EGMTIDQAMSHLFGEPCYVFTQTPQVWLDHQVMESDGELMFSWYCMDNVLEPGAAEAMFN DYCAILQAVIAAPESLKTLASGIAGHIPRRRWPLNAQADYDLRDIEQATLEYPGIRQARA EITEQGALTLDIVMADDPSPSAAMPDEHELTQLALPLPEQAQLDELEATWRWLEARALQG IAATLNRHGLFTTPEIAHRFSAIVQALSAQASHQRLLRQWLQCLTEREWLIREGESWRCR IPLSEIPEPQEACPQSQWSQALAQYLETCIARHDALFSGQCSPLELLFNEQHRVTDALYR DNPASACLNRYTAQIAALCSAERILEVGAGTAATTAPVLKATRNTRQSYHFTDVSAQFLN DARARFHDESQVSYALFDINQPLDFTAHPEAGYDLIVAVNVLHDASHVVQTLRRLKLLLK AGGRLLIVEATERNSVFQLASVGFIEGLSGYRDFRRRDEKPMLTRSAWQEVLVQAGFANE LAWPAQESSPLRQHLLVARSPGVNRPDKKAVSRYLQQRFGTGLPILQIRQREALFTPLHA PSDAPTEPAKPTPVAGGNPALEKQVAELWQSLLSRPVARHHDFFELGGDSLMATRMVAQL NRRGIARANLQDLFSHSTLSDFCAHLQAATSGEDNPIPLCQGDGEETLFVFHASDGDISA WLPLASALNRRVFGLQAKSPQRFATLDQMIDEYVGCIRRQQPHGPYVLAGWSYGAFLAAG AAQRLYAKGEQVRMVLIDPVCRQDFCCENRAALLRLLAEGQTPLALPEHFDQQTPDSQLA DFISLAKTAGMVSQNLTLQAAETWLDNIAHLLRLLTEHTPGESVPVPCLMVYAAGRPARW TPAETEWQGWINNADDAVIEASHWQIMMEAPHVQACAQHITRWLCATSTQPENTL >gi|296918667|gb|GG773033.1| GENE 27 44788 - 50895 3456 2035 aa, chain - ## HITS:1 COG:YPO1911_2 KEGG:ns NR:ns ## COG: YPO1911_2 COG1020 # Protein_GI_number: 16122159 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Yersinia pestis # 111 1491 1 1381 1381 2736 99.0 0 MISGAPSQDSLLPDNRHAADYQQLRERLIQELNLTPQQLHEESNLIQAGLDSIRLMRWLH WFRKNGYRLTLRELYAAPTRAAWNQLMLSRSPENAEEETPPDESSWPNMTESTPFPLTPV QHAYLTGRMPGQTLGGVGCHLYQEFEGHCLTASQLEQAITTLLQRHPMLHIAFRPDGQQV WLPQPYWNGVTVHDLRHNDAESRQAYLDALRQRLSHRLLRVEIGETFDFQLTLLPDNRHR LHVNIDLLIMDASSFTLFFDELNALLAGESLPAIDTRYDFRSYLLHQQKINQPLRDDARA YWLAKASTLPPAPVLPLACEPATLCEVRNTRRRMIVPATRWHAFSNRAGEYGVTPTMALA TCFSAVLARWGGLTRLLLNITLFDRQPLHPAVGAMLADFTNILLLDTACDGDTVSNLARK NQLTFTEDWEHRHWSGVELLRELKRQQRYPHGAPVVFTSNLGRSLYSSRAESPLGEPEWG ISQTPQVWIDHLAFEHHGEVWLQWDSNDALFPPALVETLFDAYCQLINQLCDDESAWQKP FADMMPASQRAIRERVNATGAPIPEGLLHEGIFRIALQQPQALAVTDMRYQWNYHELTDY ARRCAGRLIECGVQPGDNVAITMSKGAGQLVAVLAVLLAGAVYVPVSLDQPAARREKIYA DASVRLVLICQHDASAGSDDIPALAWQQAIEAEPIANPVVRAPTQPAYIIYTSGSTGTPK GVVISHRGALNTCCDINTRYQVGPHDRVLALSALHFDLSVYDIFGVLRAGGALVMVMENQ RRDPHAWCELIQRHQVTLWNSVPALFDMLLTWCEGFADATPENLRAVMLSGDWIGLDLPA RYRAFRPQGQFIAMGGATEASIWSNACEIHDVPAHWRSIPYGFPLTNQRYRVVDEQGRDC PDWVPGELWIGGIGVAEGYFNDPLRSEQQFLTLPDERWYRTGDLGCYWPDGTIEFLGRRD KQVKVGGYRIELGEIESALSQLAGVKQATVLAIGEKEKTLAAYVVPQGEAFCVTDHRNPA LPQAWHTLAGTLPCCAISPEISAEQVADFLQHRLLKLKPGHTAGADPLPLMNSLAIQPRW QAVVERWLAFLVTQRRLKPAAEGYQVCAGEEREDEHPHFSGHDLTLSQILRGARNELSLL NDAQWSPESLAFNHPASAPYIQELATICQQLAQRLQRPVRLLEVGTRTGRAAESLLAQLN AGQIEYVGLEQSQEMLLSARQRLAPWPGARLSLWNADTLAAHAHSADIIWLNNALHRLLP EDPGLLATLQQLAVPGALLYVMEFRQLTPSALLSTLLLTNGQPEALLHNSADWAALFSAA GFNCQHGDEVAGLQRFLVQCPDRQVRRDPRQLQAALAGRLPGWMVPQRIVFLDALPLTAN GKIDYQALKRRHTPEAENPAEADLPQGDIEKQVAALWQQLLSTGNVTRETDFFQQGGDSL LATRLTGQLHQAGYEAQLSDLFNHPRLADFAATLRKTDVPVEQPFVHSPEDRYQPFALTD VQQAYLVGRQPGFALGGVGSHFFVEFEIADLDLTRLETVWNRLIARHDMLRAVVRDGQQQ VLEQTPRWVIPAHILHTPEEALQVREKLAHQVLNPEVWPVFDLQVGYVDGMPARLWLCLD NLLLDGLSMQILLAELEHGYQYPQQLPPPLPVTYRDYLQQPAIQSLNADSLAWWQAQLDD IPPAPALPLRCMPQDVETPRFARLNGALDSTRWHRLKKRAADAHLTPSAVLLSVWSTVLS AWSAQPEFTLNLTLFDRRPLHPQINQILGDFTSLMLLSWHPGESWLHSAQSLQQRLSQNL NHRDVSAIRVMRQLAQRQNVPAVPMPVVFTSALGFEQDNFLARRNLLKPVWGISQTPQVW LDHQVYESEGELRFNWDFVAALFPAGQVERQFEQYCTLLNRMTEDENSWHLPLAALVPPV KQAEQGTERTSRVCPEHSQSHIAADESTVSLICDAFREVVGESVTPAQNFFEAGATSLNL VQLHVLLQRHEFSTLTLLDLFTHPSPAALAAYLTSVATVEKTKRSRPVRRRQRRI >gi|296918667|gb|GG773033.1| GENE 28 51080 - 52039 451 319 aa, chain - ## HITS:1 COG:YPO1912 KEGG:ns NR:ns ## COG: YPO1912 COG2207 # Protein_GI_number: 16122160 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 1 319 1 319 319 645 99.0 0 MMESPQTQSEISIHQLVVGKPANDGNIPAQCELLRCSLQEGMDILLWRGHFARPETLQLH DDLGRINFSCILEGTSRFAIQGLRRHTDWELARNRHYITHTPDCRGSASYCGRFESITLS FSPETLALWVPDISAVIKNKIDSHCCCQQQRCNAETHLTAQALRHALMRMHGGFSHEQKP STLWLQGQSLVMLSLVLDEHREDASCLSCHFNPMERQKLLRAKDLLLADLTQAPGVAELA RESGLSVLKIKRGFRVLFNNSVYGLFQAERMQEARRRLANGNTSVMTVAADLGYANASHF SAAFQKQFGVTPSTFKRGM >gi|296918667|gb|GG773033.1| GENE 29 52296 - 54008 194 570 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 330 535 295 507 563 79 31 3e-13 MALAGLAALTSLGALLFLAWSLRDIRATPDAIPAWPLGGVIGCVVLTFVLRLQAFNTSHY AAFHLENILRSRLARKALQLPPGVLQQMGSGSVAKVMLDDVKSLHIFVADSTPLYARAII MPLATIVILFWLDWRLAIATLGVLAFGSVVLVLARQRSEDMAQRYHKAREQVSAAVIEFV QAMPVVRTFDSGSTSFLRYQRALEEWVDVLKTWYRKAGFSARFSFSILNPLPTLFVLIWS GYGLLHYGSFDFIAWVAVLLLGSGMAEAVMPMMMLNNLVAQTRLSIQRIYQVLAMPELSL PQSDQQPQEASITFEQVSFHYPQARTGAALQEVSFHVPAGQIVALVGPSGAGKSTVARLL LRYADPDKGHIRIGGVDLRDMQTDTLMKQLSFVFQDNFLFADTIANNIRLGAPDTPLEAV IAAARVAQAHDFISALPEGYNTRVGERGVFLSGGQRQRITIARALLQDRPILVLDEATAF ADPENEAALIKALAAAMRGRTVIMVAHRLSMVTQADVILLFSDGQLREMGNHTQLLAQGG LYQRLWQHYQQAQHWVPGGTQEEVVENERQ >gi|296918667|gb|GG773033.1| GENE 30 53995 - 55797 221 600 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 337 559 16 242 329 89 30 2e-16 MKDNNPADNLAWRVIWRQLISSVGSQARMLRRSMLALLLAAFMQGIAFACLYPIIDALLR GDAPQLLNWAMAFSVAAIVTLVLRWYGLGFEYRGHLAQATHELRLRLGEQLRRVPLEKLQ RGRAGEMNALLLGSVDENLNYVIAIANILLLTIVTPLTASLATLWIDWRLGLVMLLIFPL LVPFYYWRRPAMRRQMQTLGEAHQRLSGDIVEFAQGMMVLRTCGSDADKSRALLAHFNAL ENLQTRTHRQGAGATMLIASVVELGLQVVVLSGIVWVVTGTLNLAFLIAAVAMIMRFAEP MAMFISYTSVVELIASALQRIEQFMAIAPLPVAEQSEMPERYDIRFDNVSYRYEEGDGHA LNHVSLTFPAASMSALVGASGAGKTTVTKLLMRYADPQQGQISIGGVDIRRLTPEQLNSL ISVVFQDVWLFDDTLLANIRIARPQATRQEVEEAARAAQCLEFISRLPQGWLTPMGEMGG QLSGGERQRISIARALLKNAPVVILDEPTAALDIESELAVQKAIDNLVYNRTVIIIAHRL STIAGAGNILVMEEGQVVEQGTHAQLLSHHGRYQALWQAQMAARVWRDDGGSASGEWVHE >gi|296918667|gb|GG773033.1| GENE 31 55790 - 57070 939 426 aa, chain + ## HITS:1 COG:YPO1915 KEGG:ns NR:ns ## COG: YPO1915 COG0477 # Protein_GI_number: 16122163 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 426 1 426 426 665 99.0 0 MSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLF MLPWALKFIWAPWIERWRLPPGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFPD TQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWGNSVQVGGSYLGMMCGGGVFL MLSAASGWPVAMLMMAVLIMALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLV LMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAGIAGTLAGGLLMKYTSPGRAL LTAYGVQGIALLAVVMTLMMAPGHLLLQILQCLVIVQSISLACALVCLYATLMSLSSPLQ AGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAGAFTLLAAWVAYIRLHSAREL MTSAID >gi|296918667|gb|GG773033.1| GENE 32 57098 - 58402 1209 434 aa, chain + ## HITS:1 COG:YPO1916 KEGG:ns NR:ns ## COG: YPO1916 COG0147 # Protein_GI_number: 16122164 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Yersinia pestis # 1 434 1 434 434 877 99.0 0 MKISEFLHLALPEEQWLPTISGVLRQFVEEECYVYERQPCWYLGKGCQARLHINADGTQA TFIDDAGEQKWAVDSIADCARRFMAHPQVKGRRVYGQVGFNFAAHARGIAFNAGEWPLLT LTVPREELIFEKGNVTVYADSADGCRRLCEWVKEAGTTTQNAPLAVDTALNGEAYKQQVA RAVAEIRRGEYVKVIVSRAIPLPSRIDMPATLLYGRQANTPVRSFMFRQEGREALGFSPE LVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELLHDSKEVLEHILSVKEAIAELEAVC QPGSVVVEDLMSVRQRGSVQHLGSGVSGQLAENKDAWDAFTVLFPSITASGIPKNAALNA IMQIEKTPRELYSGAILLLDDTRFDAALVLRSVFQDSQRCWIQAGAGIIAQSTPERELTE TREKLASIAPYLMV >gi|296918667|gb|GG773033.1| GENE 33 58596 - 59240 239 214 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 1 196 221 402 406 96 29 1e-26 ERLPELLERIGAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREP IIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNK ALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHL EARKAMMQWWSDYLEACRESYAPPYTIGKNKFIP >gi|296918667|gb|GG773033.1| GENE 34 59183 - 59674 138 163 aa, chain - ## HITS:1 COG:YPO1917 KEGG:ns NR:ns ## COG: YPO1917 COG0582 # Protein_GI_number: 16122165 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Yersinia pestis # 1 130 74 203 420 258 99.0 4e-69 MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIG NLPVSELKPRHFIDLLKGIEEKGLLEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVT TPPVRRHYPAPPPGGGAAPPPPRRWSGCLNCLNVLGHIIRAVN >gi|296918667|gb|GG773033.1| GENE 35 60231 - 61028 408 265 aa, chain - ## HITS:1 COG:ECs2774 KEGG:ns NR:ns ## COG: ECs2774 COG3228 # Protein_GI_number: 15832028 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 265 14 278 278 526 98.0 1e-149 MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVALAERFLQQKRLVPLQGFEL NSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQ SWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPFISLREVAGWEHDL HAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQ FYQQDPLQRLHHANDTDSFSATNVH >gi|296918667|gb|GG773033.1| GENE 36 61658 - 62326 545 222 aa, chain + ## HITS:1 COG:no KEGG:c2416 NR:ns ## KEGG: c2416 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 222 76 297 297 425 100.0 1e-118 MLDDYRNKILSGEIFFSGDTATLGHELARTYAVNPTTRSHAQFYAKTLALTEATPELSGL SQSEFLSEYLKETSLNNLSRITVDIHLEEASTEEIIEHLKVLIPRWKRQLKMKSPAPREY RFGKSTFRKIIEYRLIPMMDLIFWGEDNGIKIPLSLISSLLHEDSDNDRDEGMLKATDYP LAMAFLTDASYLKSLEDYMMENNHLKDSPVEKHVEDDRNKKK >gi|296918667|gb|GG773033.1| GENE 37 62543 - 62761 161 72 aa, chain + ## HITS:1 COG:ECs3513 KEGG:ns NR:ns ## COG: ECs3513 COG3311 # Protein_GI_number: 15832767 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 11 72 7 68 68 71 51.0 3e-13 MKENIETSVKRFIRVPDVLNRVGFSRTTLYERIKEGNFPDRVKIGPRCVAFVESEIDEWI EVTIRHSRQNAA >gi|296918667|gb|GG773033.1| GENE 38 62843 - 63133 125 96 aa, chain + ## HITS:1 COG:no KEGG:ECP_1931 NR:ns ## KEGG: ECP_1931 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 96 1 96 96 171 100.0 1e-41 MKIELITIKEFIEQAECYFRNYMDGLRRNAPDDFYYFLNNKYNMNDIMESIIKKTRYHFY DDTEEGKRNRIYGEVNHCKVKQHLRQLWIVYKCVYR >gi|296918667|gb|GG773033.1| GENE 39 63186 - 63482 268 98 aa, chain + ## HITS:1 COG:no KEGG:ECP_1930 NR:ns ## KEGG: ECP_1930 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 98 1 98 98 171 100.0 8e-42 MNTFKNKNTEIFYVVSLHIYAELFNSKDKTTSNMIITHVMDHEFVCKLIDLAMRNAEKHL LKKAWKKNAAGKLSEVDFKGVKQALAKMHYTVLAESIC >gi|296918667|gb|GG773033.1| GENE 40 63555 - 63797 279 80 aa, chain + ## HITS:1 COG:no KEGG:ECP_1929 NR:ns ## KEGG: ECP_1929 # Name: not_defined # Def: domain in histone-like proteins of HNS family; region: HNS; cl09251 # Organism: E.coli_536 # Pathway: not_defined # 1 80 1 80 80 108 100.0 9e-23 MIDEFHVMYMYKKIQVEAATTDIKTLEQLLKKFRSVVNERREEYYQEIGEKKAHKLKMKR LQRMLEKMACDRVSPEDLKE >gi|296918667|gb|GG773033.1| GENE 41 63906 - 64256 99 116 aa, chain + ## HITS:1 COG:no KEGG:c2412 NR:ns ## KEGG: c2412 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 116 11 126 126 207 100.0 9e-53 MGFEAKKKHAIAIMESKRMWRSNYAPPLLHLAWKAGLKIPPLPFASFWQITLLMGGWFGP AWGICMWFFTWKDTGIQPGTAFVSSVVAGICFGVLMAAYHWWRKVVNNLPDWDSLG >gi|296918667|gb|GG773033.1| GENE 42 64320 - 64724 521 134 aa, chain - ## HITS:1 COG:ECs1739 KEGG:ns NR:ns ## COG: ECs1739 COG2916 # Protein_GI_number: 15830993 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 134 1 135 137 117 62.0 5e-27 MSEALKALNNIRTLRAQARETDLATLEEMLEKLTTIVEDRREEENSARKEQEERQAKLEA FRQKLLEDGIDPTELLASVGSSQPKTKSTRAPRPAKYKYTDENGNEQTWTGQGRTPKAIA AAIEAGKTLEDFAI >gi|296918667|gb|GG773033.1| GENE 43 64883 - 65362 170 159 aa, chain - ## HITS:1 COG:no KEGG:ECP_1926 NR:ns ## KEGG: ECP_1926 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 159 1 159 159 227 100.0 1e-58 MRKVKTDNSDLIEYVNTVKELKNHIPIEEYRNEYRKLRSDDIPLVKAQKFKSAHTEVRRL EKKRESLIEYFIDELNPISSSKANTSARSTGNLDLFNERVLYRKAISEKSDEEIVALVIK QRTEAAVEFQRSIEQSLEQLSRISSEFEPSNQKRRKMSL >gi|296918667|gb|GG773033.1| GENE 44 65536 - 66267 52 243 aa, chain + ## HITS:1 COG:no KEGG:ECP_1925 NR:ns ## KEGG: ECP_1925 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 243 1 243 243 430 100.0 1e-119 MVYHQARDDEIKLKVGKMDSIDKRFLDFIRSKKNNIVLDDMKDDFKKDDGSSSKMADYLL FNNDVILEQKLLTNDRTDLINEKINELAKTDEWLKRSWFGRVHIEELIQKHPDSDAFRKK IMDYAYRNIKDLVATSNRQIRATKESLNIPRAVGGLVILNESIMPYESEYVMAELNFLVE NPHYEHVDFVLYISELRRSTHNIIDMSAMIKSSSPRYEFVNWYIKNVFSFDFASFFNHPI QFL >gi|296918667|gb|GG773033.1| GENE 45 66352 - 66933 293 193 aa, chain - ## HITS:1 COG:no KEGG:ECP_1924 NR:ns ## KEGG: ECP_1924 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 193 1 193 193 345 100.0 6e-94 MIENKIQTEVKKSRRGLPRHTKNPFLNDTSLHTKTGVRRITTGKDRLALVNESTGEQVGN GGFFQSMEVDKTQFVKLYVDGVSAIEGLSSSGKKVFKILYLAIRDNKDTDTILMSFDIVD QDIVKISRTTYFKGMKELADKKFIAETMIQNYYFINPDYMFNGDRLTFMKTYYLKDKKTK TKENKINCQGKTQ >gi|296918667|gb|GG773033.1| GENE 46 67846 - 67959 70 37 aa, chain + ## HITS:1 COG:no KEGG:SG2015 NR:ns ## KEGG: SG2015 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Gallinarum # Pathway: not_defined # 1 36 1 36 89 63 86.0 2e-09 MKNIKMITLFHPYEKTPFMICIVNKVEDTEHGIKLTH >gi|296918667|gb|GG773033.1| GENE 47 68286 - 69248 483 320 aa, chain + ## HITS:1 COG:no KEGG:ECP_1923 NR:ns ## KEGG: ECP_1923 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 320 1 320 320 639 100.0 0 MEGKLIFCSDAILRFQSDYDETSAVPLLSIQNTIANTDPFFLLRFFHHTVLIEEGTSLAS IFLAIELWKALLAAYLDRDVGAYIDEVRKPSGPTTWDIEWIGIDRRSSVYRAYKRQDMEE GEDFSTYFNRERFPTDEFDIESSCDASGFIKGDKERWSISGDVHEIKNLPVILYSKQALM TSAKDGLLKKNVSGVKSSKHGCFVYGDTSFSFSEVMEAIFISGLFFYAPIDAASSLDELK VSLAGLEEELAEVPKVDSNGNETDKEPTIVVAEGAFDSVAAHMETEAEEWQSIKNLCQRE GELPIRIGGIKMAEPPEFHF >gi|296918667|gb|GG773033.1| GENE 48 69309 - 70481 387 390 aa, chain + ## HITS:1 COG:no KEGG:c2405 NR:ns ## KEGG: c2405 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 390 4 393 393 724 100.0 0 MPHKKVALQLIEETLKELESPKGSLLSAIQKLQRTSDIINDDDKKIWCAIQLGDTKYTKP ITELLKFVIEAENTKNKSFQENLDKRIQELAKLGVKANIHYSDEELTLKNIESGGGYNNI GFIEEKYADLVRKKQGNDGTYYKNSLNQHINYVRKKAHELASQIYNQLKFSGTVSNCFDV LKNAVDDKLLDLNPVIAEQLMLAFKAISSDKEEEWSQALTTCRRLLEGLADELYPASKEK FNGRAVGQGQYVNRLWAFMDGAIQSDSNKDLAKAHIDFLGSWLDKVNKLTNKGVHAELDR IEAVKSVFHTYLVVADLLEYMSNTKTSVSKPDINKATLDELEALLNINRTIAKEIVKARV REGKLDLDILKNIKGIGAKTLSNIQEVFVM >gi|296918667|gb|GG773033.1| GENE 49 70573 - 70758 179 61 aa, chain - ## HITS:1 COG:no KEGG:E2348C_2102 NR:ns ## KEGG: E2348C_2102 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 1 61 65 125 125 124 100.0 1e-27 MWNYSSMTGESQLSNYIPGLALLTNSSTAHIKSLDIWFKGDVVERYDFRQTASKTSRGLM D >gi|296918667|gb|GG773033.1| GENE 50 70769 - 70939 74 56 aa, chain - ## HITS:1 COG:no KEGG:E2348C_2102 NR:ns ## KEGG: E2348C_2102 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 1 53 1 53 125 105 98.0 6e-22 MKKLLLAIFIILPLGGCTVHGNKSLTDENHQTVKVKIVKGKTTQQEILAAFGERYE >gi|296918667|gb|GG773033.1| GENE 51 70971 - 71444 234 157 aa, chain - ## HITS:1 COG:no KEGG:ECP_1920 NR:ns ## KEGG: ECP_1920 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 157 1 157 157 310 99.0 8e-84 MEAVGIVFLVVLFIIIMTTVDIQKKKHYNSFTEVLDGDILSYECQQTGIVIDTQKHTVRI FNKDKDSTYTFDQIREINYTLSEGGKFYGNGTLRGMNNAAIANWREQLSANKRSGLNILT DDIKNPMWKVNVPLKNLSTSNHELCERWMLVFKKYVF >gi|296918667|gb|GG773033.1| GENE 52 71877 - 72407 415 176 aa, chain + ## HITS:1 COG:no KEGG:SeAg_B2077 NR:ns ## KEGG: SeAg_B2077 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Agona # Pathway: not_defined # 1 176 1 176 176 323 93.0 3e-87 MKKILLVAGAALALAGCGEKGDFEKAINAKIGQDKYCFSLDNNNTSFPIRLAKPRLDSTG TGTNSVILDGFVEQGMMVFEQGYDSNVLGITEEGKKAKVWSTTDGACVGRRAVDGIKEWT EPGNGNQKVVRVTYTWKLVDVPGWIDKKAFASVKGMNEPADGAMNLFKTSNGWKAN >gi|296918667|gb|GG773033.1| GENE 53 72418 - 72693 71 91 aa, chain + ## HITS:1 COG:no KEGG:ECP_1918 NR:ns ## KEGG: ECP_1918 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 91 1 91 91 169 100.0 5e-41 MENNTIKCPFCFKESQRGVHVCTGCLATVLYGTYPGWYAAVVLLLTFGLSTLIGMSTGMA GATISLPIIAVVGFIAGKAIFSDNVVFRRKI >gi|296918667|gb|GG773033.1| GENE 54 72753 - 73589 266 278 aa, chain - ## HITS:1 COG:no KEGG:ECP_1917 NR:ns ## KEGG: ECP_1917 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 278 1 278 278 487 100.0 1e-136 MAKVNFFDKRILKKFSDYTSTISTIFSLFLIFVDIPTENKLTLGIIFLIILFLLYFGIWF KSNNLSEINLDVEGSIVTVKAGDLFRQDGFKVIAFNEYFDTQVDDVIISHNSLNGLYIDN YLAGSVSDLDHRISNHQFEEDELLEVNHKRKVGKTQKYSLGTIFVNNDYLLTAFSKFDDK NRAFLTMPDYLAFLINFWDKVNRIYAQKSVSVPIFGSGITRIKEHKNISDEDLLKIMLWT FRISEMRFKFPAKLTIVIHKDKIDKINLLDIKSARNGL >gi|296918667|gb|GG773033.1| GENE 55 73726 - 74235 -40 169 aa, chain + ## HITS:1 COG:no KEGG:c2399 NR:ns ## KEGG: c2399 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 169 1 169 169 302 100.0 3e-81 MSYRNKTYVAFASEDIKFYRLMEAWKANEKIDFNFFDAHDLFISRDTSKPETIKRNLRER MKNAKQVVLLGSGNTKRKGSDGVSFLAHEIDLIVEFNLPVVIANLDGDRTVDKNFIPKPL LDSEHYTVSVSFQPKIIKYALDNYCVNYYSSSNSGSYLYPTSVYTKLGL >gi|296918667|gb|GG773033.1| GENE 56 74367 - 74804 76 145 aa, chain - ## HITS:1 COG:no KEGG:c2398 NR:ns ## KEGG: c2398 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 145 163 307 307 276 100.0 1e-73 MQDNNNTHYDFFISHAKEDKDTFVRPLVDELNRLGVIIWYDEQTLEVGDSLRRNIDLGLR KANYGIVILSHNFLNKKWTQYELDSLINRAVYDDNKIILPIWHNINAQEVSKYSHYLADK MALQTSLYSVKEIARELAEIAYRRR >gi|296918667|gb|GG773033.1| GENE 57 75347 - 76849 547 500 aa, chain - ## HITS:1 COG:mll0964 KEGG:ns NR:ns ## COG: mll0964 COG0507 # Protein_GI_number: 13471082 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Mesorhizobium loti # 1 228 1 233 1015 126 37.0 1e-28 MAIFHLDFKIVKRSEGMTSVAKAAYHARTRITDDRIGETFDFSHRTDLHGHILLAPVSAP AHIVESSSALWNEVERVERQNNGQTARYFDVAIPVELNNDDKKKLVAEYCQKNFVDKGMI ADIAFHDLDSKNPHAHVMLTLKTIGPDGFGKKDRSWNDKKIMIQWRESWATMSNSYLEAA GSEERIDHRSLRTQCADALAQAEEAFSAEEKAFWLAKATETNRPAMQRVHRAKWNDTESQ EQRAAEQAQRDQQIEEAKKVYTTFSELPLEIVVDVRSFTITHLAEPEEIIIPDSPATVEP QPAMATPTTSRRPAAKSYRNPNKVSKVNVSGKKSPVLVVPEPKASTKLKTPSLQNTRAVN RAPLHIRKQTKPRQNGLFKRFTLLIVDFLKERFVWARRKTDTTDADHDKRIAENYVFDEV LGVNVPRSEFERRAKFNNNQTSQEAGVYGNESNINKTVRFPNRFEQEQTEVNKHMEFILS IGGKPSMPKLKQTNRKSNIK >gi|296918667|gb|GG773033.1| GENE 58 77495 - 77800 279 101 aa, chain + ## HITS:1 COG:no KEGG:c2396 NR:ns ## KEGG: c2396 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 101 4 104 104 142 100.0 4e-33 MDNESKKTRTEKTLKQKVAFAQLELNRLKSLEKSERKKVETRLKIILGAEVAKAMHCDIE QVDKELVMGILLSVSDLNDIERITYIKAGRKFLAQMDRRQK >gi|296918667|gb|GG773033.1| GENE 59 78199 - 78756 305 185 aa, chain + ## HITS:1 COG:no KEGG:ECP_1912 NR:ns ## KEGG: ECP_1912 # Name: not_defined # Def: PilS N terminal; region: PilS; pfam08805 # Organism: E.coli_536 # Pathway: not_defined # 1 185 1 185 185 223 100.0 4e-57 MVLLNNKRKSKKGFSLLELLLVLGIIAALVVAAFIVYPKVQASQRAQAESNNIATIQAGV KALYTSASSFTGLTNTVAVQAKIFPDNMLSGSGTAAKPINAFKGNVTLAATATGPSSATG SSFTITYDNVPAAECVKIATAAAGNFYITTVGTKVVKAAGGTLDVAATAAACTNATSNTL VFTSI >gi|296918667|gb|GG773033.1| GENE 60 78809 - 80272 760 487 aa, chain + ## HITS:1 COG:no KEGG:ECP_1911 NR:ns ## KEGG: ECP_1911 # Name: not_defined # Def: bacterial shufflon protein, N-terminal constant region; region: Shufflon_N; pfam04917 # Organism: E.coli_536 # Pathway: not_defined # 1 487 1 487 487 847 100.0 0 MIKKKGFTLLEVTIVLGIGTLIAFMKFQDMRNDQEAVLADNVGTQIKQLGEAVNRYISIR YDKISTLSSSNNQSSDPGPRTCSAAGCEITYQTLINEGLLPVGYTGTNAQKASYKIVLKR SGTAPDYVINGLITTASPWEEGGRIRYDLLGKAVQAAGVDGGMSRNTKIASGYGGQWSEN SNSYSNITGGGLLAYRVGYNSSMYSVYLRRDGTLPMTGDLNLGGKSIKNIKDMTASGTTT TGALKTTGNASVASDLSVGGTSTLNGPVNINNNLKVKSDTYLNTLSTTGLAKFGSRIATN GLNPNDLPAGWAGGVRTYDLYASGTVGVGTGKTVKAYMNNAGNIYASGNLTAGTIKSNGT IESTGRIKAGEYLHLNGQATLNAKCTPNGLVGRDSTGRVLSCVSGKWQTASGDGLKGIFI TITDQTSGYKCVIPNSDTGACACPGSMYDSRYGFLSGTLIAEYDERRCSGSKNEHCYSNF RRLYACK >gi|296918667|gb|GG773033.1| GENE 61 80387 - 82207 186 606 aa, chain - ## HITS:1 COG:no KEGG:ECP_1910 NR:ns ## KEGG: ECP_1910 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 606 1 606 606 1185 100.0 0 MNYIDEHDINYSRYGFESLALAHPEIDIKGLWHCDSKYYVLIEKDGILTEDDLKEFEKIQ EEHRIIGSPKLLLTQTLPNNAIKIAGRENYEVALSFGAPYTDSELENILYQYINKKFHPF KYTLKLPSLHLVLSFPRKLSDDEKSEIGTTLYSVGIKYVIDYLIDDSLLNFELSEKRHSD ALALIPNKALPKSVPTRVRNLHEEDEDFWLDNRSLILTSYDFEKSSALPTSFNKKNSCCF VDAQIFKPDNIRNYLSVYERVVISYPLIGQDNDFLDHLKIPKQHLLELISRGRIQFALPQ NIIRYNLSFLEECLNTNPECIILSRRLASSSIIDIRNKTGFLATTFSFEEKLNVLKTLRA LDGKIFNLFIKALSQNWHSMEMNIHERGAMGVSNIGIAPVMSELFNRQGRDLLLELLFSA MPLEWAMALNADFYPYHSNEHSQYNASACCLYGYNGFRINEEAIVKSKIGEIATRILSID NDMSALELDDAILKGDIPRIRDFSRSLSNLSSEELDIKIYELNKEIKKIENKESKLSSLD LCGLIASTIGVYDDNPYIPFGFAFFKIISSVLNSNDISSKNIDKIKSTLLGTQTETLLIK RTKSRM >gi|296918667|gb|GG773033.1| GENE 62 82321 - 83352 275 343 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 3 340 64 399 406 110 27 1e-22 MGLGPYPEVSLAEARDKARELRKQIRNGINPLQEKHEQKARQEILARKKKTFAECCEEVL EVKDSEMKNKKHLAQWRSTLETYAYPFIGKKAVSEITKVDLLAILEPIWLTKNETASRLR GRIETVIDYAKAKEYFEGDNPAAWKGMLKPLLPQPSKVQITKHHAALPYNQIGSFMKELR ERSGVSPRALEFAILTAARSGEIRGAEWSEIDLEGKTWTIPASRMKATKEHRVPLSDAAV ALLKALPRFKGINFVFPATRKGQLSDTALLAVLKRMGYTDLTQHGFRSTFRDWAGETTNY PREVIEHALAHQLANKAEAAYQRGTLWPKRVALMDDWAGYCIS >gi|296918667|gb|GG773033.1| GENE 63 84389 - 85039 399 216 aa, chain - ## HITS:1 COG:yodA KEGG:ns NR:ns ## COG: yodA COG3443 # Protein_GI_number: 16129919 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted protein # Organism: Escherichia coli K12 # 1 216 1 216 216 429 98.0 1e-120 MAIRLHKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGVFDDTNVQNRTLSDWDG VWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYRKGYATDIEMIGIEDGIVEFHRN NETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPKYIQFSDHIIAPRKSSHFHIF MGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH >gi|296918667|gb|GG773033.1| GENE 64 85297 - 85932 425 211 aa, chain - ## HITS:1 COG:yedZ KEGG:ns NR:ns ## COG: yedZ COG2717 # Protein_GI_number: 16129918 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 211 1 211 211 332 97.0 2e-91 MRLTAKQVTWLKVCLHLAGLLPFLWLVWAINHGGLGADPVKDIQHFTGRTALKFLLAALL ITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGVNNLALLGKELITRPYLTL GIISWVILLALAFTSTQSMQRKLGKHWQQLHNFVYLVAILAPIHYLWSVKIISPQPLIYA GLAVLLLALRYKKLLSLFNRLRKQAHNKLSL >gi|296918667|gb|GG773033.1| GENE 65 85933 - 86880 938 315 aa, chain - ## HITS:1 COG:ECs2709 KEGG:ns NR:ns ## COG: ECs2709 COG2041 # Protein_GI_number: 15831963 # Func_class: R General function prediction only # Function: Sulfite oxidase and related enzymes # Organism: Escherichia coli O157:H7 # 1 315 20 334 334 630 99.0 1e-180 MKRRQVLKALGISAAAFSLPHAAHADLLSWFKGNDRPPAPAGKPLEFSKPAAWQNNLPLT PADKVSGYNNFYEFGLDKADPAANAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEE RIYRMRCVEAWSMVVPWIGFPLHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGG LKYPYVEGLRLDEAMHPLTLMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLT RERPPTTWNLVAPDEYGFYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYAD QVASLYRGLDLRENF >gi|296918667|gb|GG773033.1| GENE 66 87046 - 87459 340 137 aa, chain - ## HITS:1 COG:ECs2708 KEGG:ns NR:ns ## COG: ECs2708 COG2351 # Protein_GI_number: 15831962 # Func_class: R General function prediction only # Function: Transthyretin-like protein # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 270 99.0 7e-73 MLKRYLVLSVATAAFSLPSLVYAAQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQL NTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHY HVPLLLSQYGYSTYRGS >gi|296918667|gb|GG773033.1| GENE 67 87544 - 88263 205 239 aa, chain + ## HITS:1 COG:ECs2707 KEGG:ns NR:ns ## COG: ECs2707 COG0745 # Protein_GI_number: 15831961 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 457 98.0 1e-129 MNQVVSITYDLWHIIFMKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSF SELLARVRAQLRQHHALNSTLEISGLKMDSVSQSVSRDNISITLTRKEFQLLWLLASRAG EIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK >gi|296918667|gb|GG773033.1| GENE 68 88719 - 89621 413 300 aa, chain + ## HITS:1 COG:yedV KEGG:ns NR:ns ## COG: yedV COG0642 # Protein_GI_number: 16129914 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 300 153 452 452 557 97.0 1e-158 MLEQYKINSIIICIVAIILCSVLSPLLIRTGLREIKKLSGVTEALNYNDSRVPVEVSALP RELKPLGQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQIRSIAEYQ KTIAGNIEELENISRLTENILFLARADKNNVLVKLDALSLNKEVENLLDYLEYLSDEKEI RFKVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDANGSLNIDIASPGTK INEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLSKHNVFRITLPQRN >gi|296918667|gb|GG773033.1| GENE 69 89755 - 90606 778 283 aa, chain - ## HITS:1 COG:yedU KEGG:ns NR:ns ## COG: yedU COG0693 # Protein_GI_number: 16129913 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli K12 # 1 282 1 282 283 571 99.0 1e-163 MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERY LPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHKDEKVMPFF EQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRF VISLCHGPAAFLALRHSDNPLNGYSICAFPDAADKQTPDIGYMPGHLTWYFGEELKKMGM NIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYAS >gi|296918667|gb|GG773033.1| GENE 70 91202 - 92260 1006 352 aa, chain - ## HITS:1 COG:STM1572 KEGG:ns NR:ns ## COG: STM1572 COG3203 # Protein_GI_number: 16764916 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 352 1 362 362 341 55.0 1e-93 MKRKVLAMLVPALLVAGAANAAEIYNKNGNKVELYGKMVGERILTDRENGEKGDNSQDTS YARVGVKGETQINPELTGYGQFELDLEASNRHNPDQTRLAYAGLSYKDFGSFDYGRNVGV AYDAEAFTDMFVEWGGDSWAGTDLFMTNRTNGVATYRNTDFFGMVEGLNFALQYQGKNEG TGNYKANGDGHGLSATYTIDGFSFAGAYANSDRTDWQSGDGKGERAEVWALSTKYDANNV YAAVMYGESHNMNSDDGDVVNKTQNFEAVLQYQFDFGLRPSIGYSYSKALDVAGYKDSDR LNYIEIGTWYYFNKNMNVYTAYQINLLDKSDYVLAHGLNTDDQLAVGIVYQF >gi|296918667|gb|GG773033.1| GENE 71 92910 - 93191 162 93 aa, chain + ## HITS:1 COG:no KEGG:c2382 NR:ns ## KEGG: c2382 # Name: yedR # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 93 35 127 127 176 100.0 4e-43 MEERLSRSPGGKLALWAFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLG ALVGFLFMALVGALLGGIAWYTRPRPARCRRYE >gi|296918667|gb|GG773033.1| GENE 72 93231 - 93881 571 216 aa, chain + ## HITS:1 COG:yedJ KEGG:ns NR:ns ## COG: yedJ COG1418 # Protein_GI_number: 16129908 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Escherichia coli K12 # 1 216 1 216 231 386 96.0 1e-107 MELQHWQAQFENWLKNHHQHQDAAHDLCHFRRVWATAQKLAADDDVDMLVILTACYFHDI VSLAKNHPQRQRSSILAAEETRRLLREEFVQFPAEKIEAVCHAIAAHSFSAQIAPLTTEA KIVQDADRLEALGAIGLARLFAVSGALGLALFDGEDPFAQHRPLDDKRYALDHFQTKLLK LPQTMQTARGKQLAQHNAQFLVEFMAKLGAELAGEN >gi|296918667|gb|GG773033.1| GENE 73 94009 - 95427 1468 472 aa, chain + ## HITS:1 COG:ECs2699 KEGG:ns NR:ns ## COG: ECs2699 COG0270 # Protein_GI_number: 15831953 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Escherichia coli O157:H7 # 1 472 1 472 472 956 99.0 0 MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENHWSAAILKRALANDSAW HRLSEKEFAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHA VRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPF SLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDKGKTFRI IMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDIS ECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVT RTLSARYYKDGAEILIDRGWDMATGEKDFDDPLNQQHRPRRLTPRECARLMGFEAPGEAK FRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQQEAQHGRRSR >gi|296918667|gb|GG773033.1| GENE 74 95408 - 95878 465 156 aa, chain + ## HITS:1 COG:vsr KEGG:ns NR:ns ## COG: vsr COG3727 # Protein_GI_number: 16129906 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Escherichia coli K12 # 1 156 1 156 156 310 98.0 9e-85 MVDVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDINRLQALGWRVLIVWECALR GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA >gi|296918667|gb|GG773033.1| GENE 75 95867 - 96787 970 306 aa, chain - ## HITS:1 COG:ECs2697 KEGG:ns NR:ns ## COG: ECs2697 COG0697 # Protein_GI_number: 15831951 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 450 100.0 1e-126 MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGH KLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIK TRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMA GAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPA LATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAKPVVAPVI QDASSE >gi|296918667|gb|GG773033.1| GENE 76 96966 - 97877 1256 303 aa, chain + ## HITS:1 COG:yedI KEGG:ns NR:ns ## COG: yedI COG2354 # Protein_GI_number: 16129904 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 303 3 305 305 498 99.0 1e-141 MAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPA QSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIA LVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFL VGGGIVVHGIAPLHHAIEHIAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVAKMRG QAH >gi|296918667|gb|GG773033.1| GENE 77 97956 - 98138 227 60 aa, chain + ## HITS:1 COG:ECs2695 KEGG:ns NR:ns ## COG: ECs2695 COG5475 # Protein_GI_number: 15831949 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli O157:H7 # 1 60 1 60 60 103 98.0 1e-22 MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETDLVPGEGSRSAEEV >gi|296918667|gb|GG773033.1| GENE 78 98327 - 100003 1237 558 aa, chain + ## HITS:1 COG:yedQ_2 KEGG:ns NR:ns ## COG: yedQ_2 COG2199 # Protein_GI_number: 16129902 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 380 558 1 179 179 349 97.0 7e-96 MENQSWLKKLARRLGPGHIVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANA LDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRNAVTEFEQHRDEHAWQIELNRRRTLPV NGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAVYVSRAGFYVST LPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDS NNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRE LALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLW ALFTSMLLLSWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKACPLAKLCHTH QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDIAGRVGGEEFCVILP GANLTQAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR LYLAKQAGRNRVFASDNA >gi|296918667|gb|GG773033.1| GENE 79 100000 - 100815 713 271 aa, chain - ## HITS:1 COG:ECs2693 KEGG:ns NR:ns ## COG: ECs2693 COG3769 # Protein_GI_number: 15831947 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 271 1 271 271 530 97.0 1e-151 MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLSRLHEANIPVILCSSKTSAEMLYLQKM LGLQGLPLIAENGAVIQLAEQWQDIDGFPRIISGISHGEICQVLNKLREKEHFKFTTFDD VDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDEHMAQFIARLNELGLQFMQGARFWH VLDASAGKDQAANWIIATYQQLSGRRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVH LHDEDPARVWRTQREGPEGWREGLDHFFSAR >gi|296918667|gb|GG773033.1| GENE 80 101195 - 101422 274 75 aa, chain - ## HITS:1 COG:no KEGG:G2583_2404 NR:ns ## KEGG: G2583_2404 # Name: yodD # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 75 6 80 80 112 100.0 5e-24 MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADA FELDIHDFSVSEVNR >gi|296918667|gb|GG773033.1| GENE 81 101585 - 101773 346 62 aa, chain + ## HITS:1 COG:no KEGG:ECO111_2534 NR:ns ## KEGG: ECO111_2534 # Name: dsrB # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 62 1 62 62 124 100.0 1e-27 MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEK AE >gi|296918667|gb|GG773033.1| GENE 82 101817 - 102440 418 207 aa, chain - ## HITS:1 COG:ECs2690 KEGG:ns NR:ns ## COG: ECs2690 COG2771 # Protein_GI_number: 15831944 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 382 99.0 1e-106 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH DASNSQRIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI KTHNKQVIYHVVRLTDNVTNGIFVNMR >gi|296918667|gb|GG773033.1| GENE 83 102730 - 103515 682 261 aa, chain - ## HITS:1 COG:ECs2689 KEGG:ns NR:ns ## COG: ECs2689 COG1684 # Protein_GI_number: 15831943 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliR # Organism: Escherichia coli O157:H7 # 1 261 1 261 261 362 98.0 1e-100 MMQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMITFAIAPSLPA NDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPGSHL NMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIGSEPLNSNAFLALTKAGSLIF LNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFC EHLFSEIFNLLADIISELPLI >gi|296918667|gb|GG773033.1| GENE 84 103524 - 103793 389 89 aa, chain - ## HITS:1 COG:STM1980 KEGG:ns NR:ns ## COG: STM1980 COG1987 # Protein_GI_number: 16765318 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliQ # Organism: Salmonella typhimurium LT2 # 1 89 1 89 89 98 95.0 3e-21 MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFI AIIIAGPWMLNLLLDYVRTLFTNLPYIIG >gi|296918667|gb|GG773033.1| GENE 85 103803 - 104540 661 245 aa, chain - ## HITS:1 COG:ECs2687 KEGG:ns NR:ns ## COG: ECs2687 COG1338 # Protein_GI_number: 15831941 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliP # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 392 100.0 1e-109 MRRLLSVAPVLLWLITPLAFAQLPGITSQPLPGGGQSWSLPVQTLVFITSLTFIPAILLM MTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEK ISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQGPEAVPMRILLPAYVTSELK TAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA QSFYS >gi|296918667|gb|GG773033.1| GENE 86 104540 - 104905 310 121 aa, chain - ## HITS:1 COG:STM1978 KEGG:ns NR:ns ## COG: STM1978 COG3190 # Protein_GI_number: 16765316 # Func_class: N Cell motility # Function: Flagellar biogenesis protein # Organism: Salmonella typhimurium LT2 # 1 121 2 125 125 133 65.0 6e-32 MNNHATVQSSAPVSAEPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASA SLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRGGR S >gi|296918667|gb|GG773033.1| GENE 87 104908 - 105321 544 137 aa, chain - ## HITS:1 COG:ECs2685 KEGG:ns NR:ns ## COG: ECs2685 COG1886 # Protein_GI_number: 15831939 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar motor switch/type III secretory pathway protein # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 243 98.0 9e-65 MSDMNNPADDNNGAMDDLWAEALSEQKSTSGKSAADAVFQQFGGGDVSGALQDIDLIMDI PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV RITDIITPSERMRRLSR >gi|296918667|gb|GG773033.1| GENE 88 105318 - 106322 1037 334 aa, chain - ## HITS:1 COG:ECs2684 KEGG:ns NR:ns ## COG: ECs2684 COG1868 # Protein_GI_number: 15831938 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 649 100.0 0 MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQRRVVRERLQALEIINER FARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSP SLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKLALEGYSDAWKAINPLEVEYV RSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSR NEDQNWRDNLVRQVQHSQLELVANFADISLRLSQILKLKPGDVLPIEKPDRIIAHVDGVP VLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK >gi|296918667|gb|GG773033.1| GENE 89 106327 - 106791 449 154 aa, chain - ## HITS:1 COG:ECs2683 KEGG:ns NR:ns ## COG: ECs2683 COG1580 # Protein_GI_number: 15831937 # Func_class: N Cell motility # Function: Flagellar basal body-associated protein # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 289 100.0 2e-78 MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADDKAQQRVVPSPVFYALD TFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKK NLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR >gi|296918667|gb|GG773033.1| GENE 90 106896 - 108023 845 375 aa, chain - ## HITS:1 COG:fliK KEGG:ns NR:ns ## COG: fliK COG3144 # Protein_GI_number: 16129890 # Func_class: N Cell motility # Function: Flagellar hook-length control protein # Organism: Escherichia coli K12 # 1 375 1 375 375 526 97.0 1e-149 MIRLAPLITANVDTTTLPGGKASDAAQDFLALLSEALAGETTTDKAAPQLLVATDKPTTK GEPLVSDIVSDAQQADLLIPVDETLPVINDEQSTSTPLTTAQTMTLAAVADKNTTKDEKA DDLNEDVTASLSALFAMLPGFDNTPKVTDAPSTVLPAEKPTLFTKLTSAQLTTAQPDDAP GTPAQPLTPLVAEAQSKAEIISTPSPVTADASPLITPHQTQPLPTVAAPVLSAPLGSHEW QQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLKVDDNQAQIQMISPHQHVRAALEAA LPVLRTQLAESGIQLGQSNISGESFSGQQQAASQQQQSQRTANHEPLAGEDDDTLPVPVS LQGRVTGNSGVDIFA >gi|296918667|gb|GG773033.1| GENE 91 108020 - 108463 528 147 aa, chain - ## HITS:1 COG:fliJ KEGG:ns NR:ns ## COG: fliJ COG2882 # Protein_GI_number: 16129889 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar biosynthesis chaperone # Organism: Escherichia coli K12 # 1 147 1 147 147 204 98.0 3e-53 MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRNNLNSDMSAG MTSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWREKKQRLQAWQTLQKRQST AALLAENRLDQKKMDEFAQRAAMRKPE >gi|296918667|gb|GG773033.1| GENE 92 108482 - 109855 1642 457 aa, chain - ## HITS:1 COG:ZfliI KEGG:ns NR:ns ## COG: ZfliI COG1157 # Protein_GI_number: 15802376 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway ATPase # Organism: Escherichia coli O157:H7 EDL933 # 13 457 52 496 496 824 99.0 0 MTTRLTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGLQLPLGATCVIERQNGS ETHEVESEVVGFNGQRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGKQLPLGPALLGRV LDGSGKPLDGLPSPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGL FAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPAD VSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPS VFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEA GHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDK AIALWPQLESYLQQGIFERADWEASLQGLERIFPTVS >gi|296918667|gb|GG773033.1| GENE 93 109855 - 110541 783 228 aa, chain - ## HITS:1 COG:fliH KEGG:ns NR:ns ## COG: fliH COG1317 # Protein_GI_number: 16129887 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway protein # Organism: Escherichia coli K12 # 1 228 8 235 235 360 98.0 2e-99 MSDNLPWKTWMPDDLAPPQAEFVPMVEPEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGI AEGRQQGHEQGYQEGLAQGLEQGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRL MQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGAT LSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV >gi|296918667|gb|GG773033.1| GENE 94 110534 - 111529 1255 331 aa, chain - ## HITS:1 COG:ECs2678 KEGG:ns NR:ns ## COG: ECs2678 COG1536 # Protein_GI_number: 15831932 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 551 100.0 1e-157 MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANVTQISNKQLTDVLAEFE QEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRDTASGIETLNFMEPQSAAD LIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLRIATFGGVQPAALAELTEVLN GLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLV DVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLRNMSQRAADILRDDLANRGPVRLSQ VENEQKAILLIVRRLAETGEMVIGSGEDTYV >gi|296918667|gb|GG773033.1| GENE 95 111522 - 112973 1276 483 aa, chain - ## HITS:1 COG:fliF KEGG:ns NR:ns ## COG: fliF COG1766 # Protein_GI_number: 16129885 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway lipoprotein # Organism: Escherichia coli K12 # 1 483 70 552 552 832 98.0 0 MNIPYRFSEASGAIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEKFGISQFSEQVNY QRALEGELSRTIETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQIS AIVHLVSSAVAGLPPGNVTLVDQGGHLLTQSNTSGRDLNDAQLKYASDVEGRIQRRIEAI LSPIVGNGNIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQSGSGYPGGV PGALSNQPAPANNAPISTPPANQNNRQQQASTTSNSGPRSTQRNETSNYEVDRTIRHTKM NVGDVQRLSVAVVVNYKTLPDGKPLPLSNEQMKQIEALTREAMGFSEKRGDSLNVVNSPF NSSDESGGALPFWQQQVFIDQLLAAGRWLLVLLVAWLLWRKAVRPQLTRRAEAVKTVQQQ AQAREEVEDAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWINN DHE >gi|296918667|gb|GG773033.1| GENE 96 113067 - 113210 168 47 aa, chain - ## HITS:1 COG:fliF KEGG:ns NR:ns ## COG: fliF COG1766 # Protein_GI_number: 16129885 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway lipoprotein # Organism: Escherichia coli K12 # 1 46 1 46 552 90 100.0 1e-18 MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAKAPG >gi|296918667|gb|GG773033.1| GENE 97 113425 - 113739 456 104 aa, chain + ## HITS:1 COG:ECs2676 KEGG:ns NR:ns ## COG: ECs2676 COG1677 # Protein_GI_number: 15831930 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar hook-basal body protein # Organism: Escherichia coli O157:H7 # 1 104 1 104 104 144 99.0 5e-35 MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDRISDTQTVARTQAEKFT LGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV >gi|296918667|gb|GG773033.1| GENE 98 114084 - 114416 320 110 aa, chain + ## HITS:1 COG:ECs1614 KEGG:ns NR:ns ## COG: ECs1614 COG2076 # Protein_GI_number: 15830868 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 186 98.0 8e-48 MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAY AIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSRSAPH >gi|296918667|gb|GG773033.1| GENE 99 114585 - 115136 9 183 aa, chain + ## HITS:1 COG:ybcL KEGG:ns NR:ns ## COG: ybcL COG1881 # Protein_GI_number: 16128528 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Escherichia coli K12 # 1 183 1 183 183 339 96.0 1e-93 MKKLIVSSVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGA PEGTKSFAVTVYDPDAPTGSGWWHWTVANIPATVTYLPTDAGRRDGTKLPTGAVQGRNDF GYAGFGGACPPKGDKPHHYQFKVWALKTDKIPVDSNSSGALVGYMLNANKIATAEITPVY EIK >gi|296918667|gb|GG773033.1| GENE 100 115270 - 115518 105 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|333017811|gb|EGK37118.1| ## NR: gi|333017811|gb|EGK37118.1| hypothetical protein SFK227_2314 [Shigella flexneri K-227] # 1 82 1 82 82 148 100.0 1e-34 MFLVAPNNILTRGSEVSRNLSCYEFDQLSHKIFETFQLDQWDNKAFLQDKDLLLDNSQYK IHIHREIILSDYYQQLDYASPN >gi|296918667|gb|GG773033.1| GENE 101 116476 - 117120 721 214 aa, chain - ## HITS:1 COG:STM1572 KEGG:ns NR:ns ## COG: STM1572 COG3203 # Protein_GI_number: 16764916 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 214 145 362 362 299 80.0 3e-81 MTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKNDRTDVTEANGDGFGFSTTYEYEGFGVG ATYAKSDRTNDQVIYGNNSLNASGQNAEVWAAGLKYDANNIYLATTYSETQNMTVFGNNH IANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLGAWGDQDLVEYIDVGATYYFNKNMST FVDYKINLIDKSDFTKASGVATDDIVAVGLVYQF >gi|296918667|gb|GG773033.1| GENE 102 117083 - 117595 294 170 aa, chain - ## HITS:1 COG:nmpC KEGG:ns NR:ns ## COG: nmpC COG3203 # Protein_GI_number: 16128536 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 148 21 168 375 277 99.0 7e-75 MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYVR LGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYG VAYDIGAWTDVLPEFGGDTWTQTDVFMTGGGGDPNRCVHDWSHHRCCNLS >gi|296918667|gb|GG773033.1| GENE 103 118108 - 118776 385 222 aa, chain - ## HITS:1 COG:ZyedK KEGG:ns NR:ns ## COG: ZyedK COG2135 # Protein_GI_number: 15802366 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 1 222 1 222 222 431 95.0 1e-121 MCGRFAQSQTREDYLAFLAEDIERDIPYDPEPIGRYNVAPGTKVLLLSERDEHLHLDPVF WGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRVICFADGWFEWKKEGDKKQPYFIYR ADGQPVFIAAIGSTPFERGDEAEGVLIVTAAADQGLVDIHDRRPLVLSPETAREWMRQDI GGKEASEIATRSCVPANQFIWHPVSRAVGNVKNQGAELIQPV >gi|296918667|gb|GG773033.1| GENE 104 118885 - 119118 306 77 aa, chain - ## HITS:1 COG:ECs2669 KEGG:ns NR:ns ## COG: ECs2669 COG0425 # Protein_GI_number: 15831923 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 77 1 77 77 145 100.0 2e-35 MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYT VLDIQQDGPTIRYLIQK >gi|296918667|gb|GG773033.1| GENE 105 119115 - 120320 1513 401 aa, chain - ## HITS:1 COG:yedE KEGG:ns NR:ns ## COG: yedE COG2391 # Protein_GI_number: 16129876 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Escherichia coli K12 # 1 401 1 401 401 704 99.0 0 MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQLLQLFGVHA EEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVKLRMPRSRIRIMQAIIGGI IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSWFGARFTLLPIFRIPVKMQKV SAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQPKLGLAMLFGVGFGLLIERAQI CFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYVQLGVEPKIMWAGPNAVIGGLLFGF GIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTILAYYWDDFAPALATDWDKINLLKT FGPMGGLLVTYLLLFAALMLIIGWEKRFFRRAAPQIAKEIA >gi|296918667|gb|GG773033.1| GENE 106 120507 - 120920 562 137 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1982 NR:ns ## KEGG: ECS88_1982 # Name: yedD # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 137 1 137 137 265 100.0 5e-70 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLTGYWQTKGPQRALVSPEAIGSLIVTK EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT AECAAALDKAPLPTPLP >gi|296918667|gb|GG773033.1| GENE 107 120954 - 122441 1488 495 aa, chain - ## HITS:1 COG:amyA KEGG:ns NR:ns ## COG: amyA COG0366 # Protein_GI_number: 16129874 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 495 1 495 495 1030 99.0 0 MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPAYKGASGGYSVGYDSYD LFDLGEFDQKGCIPTKYGDKAQLLAAIDALKRNDIAVLLDVVVNHKMGADEKEAIRVQRV NADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCFSGIDHIEHPDEDGIFKIVND YTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKYWARWVMEQTQCDGFRLDAVKHI PAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQTYIDQVEGKTMLFDAPLQMKFHEAS RMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLREN GVPSVFYPDLYGAHYEDVGGDGQTYPIDMPIIEQLDELILARQRFAHGVQTLFFDHPNCI AFSRSGTDEYPGCVVVMSNGDDGEKTIHLGENYGNKTWRDFLGNRQESVVTDENGEATFF CNGGSVSVWVIEEVI >gi|296918667|gb|GG773033.1| GENE 108 122519 - 122884 413 121 aa, chain - ## HITS:1 COG:no KEGG:S2065 NR:ns ## KEGG: S2065 # Name: fliT # Def: flagellar biosynthesis protein FliT # Organism: S.flexneri_2457T # Pathway: Flagellar assembly [PATH:sfx02040] # 1 121 1 121 121 205 100.0 4e-52 MNNAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVAPSTTM QEQLRPMLHLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL F >gi|296918667|gb|GG773033.1| GENE 109 122884 - 123294 444 136 aa, chain - ## HITS:1 COG:ECs2664 KEGG:ns NR:ns ## COG: ECs2664 COG1516 # Protein_GI_number: 15831918 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellin-specific chaperone FliS # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 224 99.0 3e-59 MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARLFMQDNNQQGKGVSLSK AINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLRNDVSAVEEVEALMRNIAD AWKESLLSPSLIQDPV >gi|296918667|gb|GG773033.1| GENE 110 123319 - 124725 1325 468 aa, chain - ## HITS:1 COG:fliD KEGG:ns NR:ns ## COG: fliD COG1345 # Protein_GI_number: 16129871 # Func_class: N Cell motility # Function: Flagellar capping protein # Organism: Escherichia coli K12 # 1 468 1 468 468 540 99.0 1e-153 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT ISNALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA GADSQNSSNGALLGDSTLRTIQTQLKSMLSNTVSSSNYKTLAQIGITTDPSDGKLELDAD KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK >gi|296918667|gb|GG773033.1| GENE 111 124991 - 126748 1503 585 aa, chain + ## HITS:1 COG:ECs2662 KEGG:ns NR:ns ## COG: ECs2662 COG1344 # Protein_GI_number: 15831916 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Escherichia coli O157:H7 # 1 585 1 585 585 756 99.0 0 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG LTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRL DEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDLKKIDSDTLGLNGFNVNGKGT ITNKAATVSDLTSAGAKLNTTTGLYDLKTENTLLTTDAAFDKLGNGDKVTVGGVDYTYNA KSGDFTTTKSTAGTGVDAAAQATDSAKKRDALAATLHADVGKSVNGSYTTKDGTVSFETD SAGNITIGGSQAYVDDAGNLTTNNAGSAAKADMKALLKAASEGSDGASLTFNGTEYTIAK ATPATTSPVAPLIPGGITYQATVSKDVVLSETKAAAATSSITFNSGVLSKTIGFTAGESS DAAKSYVDDKGGITNVADYTVSYSVNKDNGSVTVAGYASATDTNKDYAPAIGTAVNVNSA GKITTETTSAGSATTNPLAALDDAISSIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQ SRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG >gi|296918667|gb|GG773033.1| GENE 112 127076 - 127795 800 239 aa, chain + ## HITS:1 COG:ECs2661 KEGG:ns NR:ns ## COG: ECs2661 COG1191 # Protein_GI_number: 15831915 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 415 99.0 1e-116 MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ RVMETIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL >gi|296918667|gb|GG773033.1| GENE 113 127844 - 128392 321 182 aa, chain + ## HITS:1 COG:no KEGG:APECO1_962 NR:ns ## KEGG: APECO1_962 # Name: fliZ # Def: flagella biosynthesis protein FliZ # Organism: E.coli_APEC # Pathway: not_defined # 1 182 14 195 195 368 100.0 1e-101 MVQHLKRRPLSRYLKDFKHSQTHCAHCRKLLDRITLVRDGKIVNKIEISRLDTLLDENGW QVEQQSWAALCRFCGDLHCKTQSDFFDIIGFKKFLFEQTEMSPGTVREYVVRLRRLGNHL HEQNISLDQLQDGFLDEILAPWLPSTSTNNYRIALRKYQHYQRQTCTGLVQKSSSQPASD IY >gi|296918667|gb|GG773033.1| GENE 114 128480 - 129280 1282 266 aa, chain + ## HITS:1 COG:fliY KEGG:ns NR:ns ## COG: fliY COG0834 # Protein_GI_number: 16129867 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 266 1 266 266 490 100.0 1e-138 MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD GKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF STPYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDP TKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVN DAIAEMQKDGTLQALSEKWFGADVTK >gi|296918667|gb|GG773033.1| GENE 115 129385 - 130371 1156 328 aa, chain + ## HITS:1 COG:yedO KEGG:ns NR:ns ## COG: yedO COG2515 # Protein_GI_number: 16129866 # Func_class: E Amino acid transport and metabolism # Function: 1-aminocyclopropane-1-carboxylate deaminase # Organism: Escherichia coli K12 # 1 328 33 360 360 647 99.0 0 MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAA DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLD LFNTQIEMCDALTDPNTQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC EGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS QKRFKDEGPILFIHTGGAPALFAYHPHV >gi|296918667|gb|GG773033.1| GENE 116 130386 - 131054 719 222 aa, chain + ## HITS:1 COG:yecS KEGG:ns NR:ns ## COG: yecS COG0765 # Protein_GI_number: 16129865 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 222 1 222 222 396 100.0 1e-110 MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYIS IFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWE AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS RTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQEREPK >gi|296918667|gb|GG773033.1| GENE 117 131051 - 131803 655 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 246 2 241 245 256 51 1e-66 MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTI TVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEE ATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELV GEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGVAKALFADPQQPRT RQFMEKFLLQ >gi|296918667|gb|GG773033.1| GENE 118 132108 - 132773 399 221 aa, chain + ## HITS:1 COG:sdiA KEGG:ns NR:ns ## COG: sdiA COG2771 # Protein_GI_number: 16129863 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli K12 # 1 221 20 240 240 434 98.0 1e-122 MEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPESWVSYYQAKNFLAI DPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCS TREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILKWTAEGKTSAE IAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI >gi|296918667|gb|GG773033.1| GENE 119 132841 - 133065 360 74 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1140 NR:ns ## KEGG: ECIAI39_1140 # Name: yecF # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 74 1 74 74 103 100.0 2e-21 MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLKMEKQLALIEDETQAAV FSKTVKQIKQAYRQ >gi|296918667|gb|GG773033.1| GENE 120 133524 - 134180 494 218 aa, chain + ## HITS:1 COG:ECs2652 KEGG:ns NR:ns ## COG: ECs2652 COG2197 # Protein_GI_number: 15831906 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 218 1 218 218 415 100.0 1e-116 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRANAVDVVLMDMSMPGI GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ >gi|296918667|gb|GG773033.1| GENE 121 134243 - 136009 1654 588 aa, chain + ## HITS:1 COG:ECs2651 KEGG:ns NR:ns ## COG: ECs2651 COG0322 # Protein_GI_number: 15831905 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1192 99.0 0 MYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEH NYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETL ALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGK DDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAG MACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFN LSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTA LASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAM NQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADR KAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIE GIGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH >gi|296918667|gb|GG773033.1| GENE 122 136066 - 136614 264 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 9 175 486 665 904 106 38 2e-21 MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQST RFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIAREIIISALREWMAELGKRSS VAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVAAVLTLWSMLQYLSAARADLL DQ >gi|296918667|gb|GG773033.1| GENE 123 137264 - 137929 722 221 aa, chain + ## HITS:1 COG:ECs2616 KEGG:ns NR:ns ## COG: ECs2616 COG3318 # Protein_GI_number: 15831870 # Func_class: R General function prediction only # Function: Predicted metal-binding protein related to the C-terminal domain of SecA # Organism: Escherichia coli O157:H7 # 1 221 1 221 221 438 100.0 1e-123 MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPAQWLVAVWGGA DYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFG YMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAALDLHA YWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQCCLH >gi|296918667|gb|GG773033.1| GENE 124 137980 - 139191 1123 403 aa, chain - ## HITS:1 COG:tyrP KEGG:ns NR:ns ## COG: tyrP COG0814 # Protein_GI_number: 16129857 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli K12 # 1 403 1 403 403 662 99.0 0 MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQH VPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSA TAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVMLVLLLPHIHKVNLLTLPLQQ GLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVFIIGSAIPLVAYIFWQLATLGSI DSTTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLAD LFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSR KHNPQAGYRVKGGRPALVVVFLCGIAVIGVQFLIAAGLLPEVG >gi|296918667|gb|GG773033.1| GENE 125 139382 - 139621 338 79 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_2201 NR:ns ## KEGG: ECUMN_2201 # Name: yecH # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 79 1 79 79 140 98.0 2e-32 MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSAEGMTAGELVAFLAAKG KFIPSEEGFSTDQSKICRH >gi|296918667|gb|GG773033.1| GENE 126 139659 - 140156 629 165 aa, chain - ## HITS:1 COG:ECs2613 KEGG:ns NR:ns ## COG: ECs2613 COG1528 # Protein_GI_number: 15831867 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Escherichia coli O157:H7 # 1 165 1 165 165 291 100.0 3e-79 MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDY LTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFL QWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELSTLDTQN >gi|296918667|gb|GG773033.1| GENE 127 140328 - 140651 72 107 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1960 NR:ns ## KEGG: ECS88_1960 # Name: yecR # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 15 107 15 107 107 182 100.0 4e-45 MRLLILTLSLITLTGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHASTDRYVSRGIADRA CQQAGYTHAIPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL >gi|296918667|gb|GG773033.1| GENE 128 141116 - 141367 312 83 aa, chain + ## HITS:1 COG:no KEGG:SDY_1117 NR:ns ## KEGG: SDY_1117 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 83 1 83 83 138 100.0 6e-32 MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQLKNIDFTNHPAAADPV TMRAIQKAIALIELKFTPQGESH >gi|296918667|gb|GG773033.1| GENE 129 141491 - 141847 384 118 aa, chain - ## HITS:1 COG:ECs2610 KEGG:ns NR:ns ## COG: ECs2610 COG1528 # Protein_GI_number: 15831864 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Escherichia coli O157:H7 # 1 118 1 118 167 204 98.0 3e-53 MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLRAQAQSNVTQMMRMFNF MKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLAQLADEAKELNDDSTAS >gi|296918667|gb|GG773033.1| GENE 130 142644 - 143633 1372 329 aa, chain + ## HITS:1 COG:ECs2609 KEGG:ns NR:ns ## COG: ECs2609 COG1879 # Protein_GI_number: 15831863 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 632 99.0 0 MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIK IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKG KPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITSNELDTARRRTTGSMD ALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATE GQGFKASDIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKGVEP TKFTEVTDVVLITRDNFKEELEKKGLGGK >gi|296918667|gb|GG773033.1| GENE 131 143703 - 145217 183 504 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 275 477 20 217 245 75 25 6e-12 MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPT TGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSLL NYEAGLQIKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREID NLFRVIRELRKEGRGILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDHDALVQAM VGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSELMK GMFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISAR RKHVLGGCVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKV ILLDEPTRGIDVGAKHEIYNVIYALAAQGVAVLFASSDLPEVLGVADRIVVMREGEIAGE LLHEQADERQALSLAMPKVSQAVA >gi|296918667|gb|GG773033.1| GENE 132 145232 - 146218 1028 328 aa, chain + ## HITS:1 COG:araH KEGG:ns NR:ns ## COG: araH COG1172 # Protein_GI_number: 16132221 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 328 2 329 329 518 99.0 1e-147 MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISM SGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGLLLGVLCGLVN GFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFGLPAPIWLT VACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILA SRMPSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISP FAQYVVRGLILLAAVIFDRYKQKAKRTV >gi|296918667|gb|GG773033.1| GENE 133 146385 - 147185 768 266 aa, chain + ## HITS:1 COG:otsB KEGG:ns NR:ns ## COG: otsB COG1877 # Protein_GI_number: 16129849 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphatase # Organism: Escherichia coli K12 # 1 266 1 266 266 526 99.0 1e-149 MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDTILQGLQLLATASDGALALIS GRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGA ELEAKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQQGKCVVEIKPKGTSKGEAIA AFMQEAPFIGRTPVFLGDDLTDESGFAVVNRLGGMSVKIGTGATQASWRLAGVPDVWSWL EMITTALQQKRENNRSDDYESFSRSI >gi|296918667|gb|GG773033.1| GENE 134 147160 - 148584 1288 474 aa, chain + ## HITS:1 COG:otsA KEGG:ns NR:ns ## COG: otsA COG0380 # Protein_GI_number: 16129848 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphate synthase # Organism: Escherichia coli K12 # 1 474 1 474 474 953 99.0 0 MSRLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGN ITWASFNLSEQDLDEYYNKFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPL LQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCEY DLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTACGKAFRTEVYPIGIEPKEIAKQAAGP LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS RGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMS LAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAESQQRDKVATFPKLA >gi|296918667|gb|GG773033.1| GENE 135 148591 - 149019 425 142 aa, chain - ## HITS:1 COG:ECs2603 KEGG:ns NR:ns ## COG: ECs2603 COG0589 # Protein_GI_number: 15831857 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 142 1 142 142 271 97.0 2e-73 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRNV MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCRKHHFDLVICGNHNHSFFSRAS CSAKRVITSSEVDVLLVPLTGD >gi|296918667|gb|GG773033.1| GENE 136 149799 - 150149 280 116 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2071 NR:ns ## KEGG: EC55989_2071 # Name: flhD # Def: transcriptional activator FlhD # Organism: E.coli_55989 # Pathway: Two-component system [PATH:eck02020]; Flagellar assembly [PATH:eck02040] # 1 116 4 119 119 196 100.0 4e-49 MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAET NQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA >gi|296918667|gb|GG773033.1| GENE 137 150152 - 150730 394 192 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2070 NR:ns ## KEGG: EC55989_2070 # Name: flhC # Def: transcriptional activator FlhC # Organism: E.coli_55989 # Pathway: Two-component system [PATH:eck02020]; Flagellar assembly [PATH:eck02040] # 1 192 1 192 192 385 100.0 1e-106 MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFS TDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQCPQAEEGPLLALTRA WTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSQNPADII PQLLDEQRVQAV >gi|296918667|gb|GG773033.1| GENE 138 150857 - 151744 955 295 aa, chain + ## HITS:1 COG:ECs2600 KEGG:ns NR:ns ## COG: ECs2600 COG1291 # Protein_GI_number: 15831854 # Func_class: N Cell motility # Function: Flagellar motor component # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 543 99.0 1e-154 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS VMLEFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQTTTEEA >gi|296918667|gb|GG773033.1| GENE 139 151741 - 152667 731 308 aa, chain + ## HITS:1 COG:ECs2599 KEGG:ns NR:ns ## COG: ECs2599 COG1360 # Protein_GI_number: 15831853 # Func_class: N Cell motility # Function: Flagellar motor protein # Organism: Escherichia coli O157:H7 # 1 308 1 308 308 584 99.0 1e-167 MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAE YFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRG DLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIA PVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLNGGKVLRVVG MAATMRLSDRGPDDAVNRRISLLVLNKHAEQAILHENAESQNEPVSALEKPEVAPQVSVP TMPSAEPR >gi|296918667|gb|GG773033.1| GENE 140 152678 - 154636 1718 652 aa, chain + ## HITS:1 COG:cheA KEGG:ns NR:ns ## COG: cheA COG0643 # Protein_GI_number: 16129840 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein histidine kinase and related kinases # Organism: Escherichia coli K12 # 1 652 3 654 654 1186 98.0 0 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFNYICQA LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL TTLTDVVKGADSLSAILPDDIAEDDITAVLCFVIEADQITFETVDVSPKISTPPMLKLAA EQAPIGRVEREKTTRSSESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG AGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI QEMGGHVEIQSMQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA >gi|296918667|gb|GG773033.1| GENE 141 154657 - 155160 640 167 aa, chain + ## HITS:1 COG:ECs2597 KEGG:ns NR:ns ## COG: ECs2597 COG0835 # Protein_GI_number: 15831851 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 293 100.0 1e-79 MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTN LRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAP EFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDSAASEVA >gi|296918667|gb|GG773033.1| GENE 142 155305 - 156966 1437 553 aa, chain + ## HITS:1 COG:tar KEGG:ns NR:ns ## COG: tar COG0840 # Protein_GI_number: 16129838 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 1 553 1 553 553 894 99.0 0 MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLM LQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATS RNIDEKYKNYHTALTELIDYLDYGNTGAYFAQPTQGMQNAMGEAFAQYALSSEKLYRDIV TDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLTPLAKIIAHIREIAGGNLANTLT IDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASAL EETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIA DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKVLIE DSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDERSRGIDQVALAVSEMDR VTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAASPLTNKPQTPSRPASEQPPAQPR LRIAEQDPNWETF >gi|296918667|gb|GG773033.1| GENE 143 157257 - 158117 604 286 aa, chain + ## HITS:1 COG:cheR KEGG:ns NR:ns ## COG: cheR COG1352 # Protein_GI_number: 16129836 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methylase of chemotaxis methyl-accepting proteins # Organism: Escherichia coli K12 # 1 286 1 286 286 568 98.0 1e-162 MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRA LGLADFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYRVW SAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQ LQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQTT QQKILRRFVPLLKPDGLLFAGHSENFSHLERRFTLRGQTVYALSKD >gi|296918667|gb|GG773033.1| GENE 144 158120 - 159169 743 349 aa, chain + ## HITS:1 COG:ECs2593 KEGG:ns NR:ns ## COG: ECs2593 COG2201 # Protein_GI_number: 15831847 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 653 99.0 0 MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNPDVLTLDVEMP RMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAIDFVTKPQLGIREGMLAYS EMIAEKVRTAAKASLAAHKPLSVPTTLKAGPLLSSEKLIAIGASTGGTEAIRHVLQPLPL SSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGERVLPGHAYIAPGDRHMELARSG ANYQIKIHDGPAVNRHRPSVDVLFHSVAKQAGRNAVGVILTGMGNDGAAGMLAMRQAGAW TLAQNEASCVVFGMPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI >gi|296918667|gb|GG773033.1| GENE 145 159184 - 159573 544 129 aa, chain + ## HITS:1 COG:ECs2592 KEGG:ns NR:ns ## COG: ECs2592 COG0784 # Protein_GI_number: 15831846 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Escherichia coli O157:H7 # 1 129 1 129 129 233 99.0 8e-62 MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGLDALNKLQAGGYGFVISDWNM PNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKL NKIFEKLGM >gi|296918667|gb|GG773033.1| GENE 146 159584 - 160228 768 214 aa, chain + ## HITS:1 COG:cheZ KEGG:ns NR:ns ## COG: cheZ COG3143 # Protein_GI_number: 16129833 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein # Organism: Escherichia coli K12 # 1 214 1 214 214 345 100.0 3e-95 MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPDARDRLYYVVQ MTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPIDLADARELVTDTRQFLAD VPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIERQLLMVLLENIPEQESRPKR ENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF >gi|296918667|gb|GG773033.1| GENE 147 160433 - 161581 1112 382 aa, chain + ## HITS:1 COG:flhB KEGG:ns NR:ns ## COG: flhB COG1377 # Protein_GI_number: 16129832 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Escherichia coli K12 # 1 382 1 382 382 694 99.0 0 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVAIISPVMLGGLVFSGKSL QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP VQPTHLPVPEALDFINEKPTHE >gi|296918667|gb|GG773033.1| GENE 148 161574 - 163652 1989 692 aa, chain + ## HITS:1 COG:flhA KEGG:ns NR:ns ## COG: flhA COG1298 # Protein_GI_number: 16129831 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhA # Organism: Escherichia coli K12 # 1 692 1 692 692 1266 99.0 0 MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFILDLLFTFNIALSIMVLL VAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVG GNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDE AKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVINVVGGLLVGVLQHGMSMGHAAE SYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLG LLGLVPGMPNLVFLLFTAGLLGLAWWIRGREQKAPAEPKPVKMAENNTVVEATWNDVQLE DSLGMEVGYRLIPMVDFQQDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRI LMKGVEIGSGDAYPGRWLAINPGTAAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYT VVEASTVVATHLNHLISQHAAELFGRQEAQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKV LQNLLDEKVPIRDMRTILETLAEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVI GLDTPLERLLLQALQGGGGLEPGLADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSR FLRRSLPQLVVLSNLELSDNRHIRMTATIGGK >gi|296918667|gb|GG773033.1| GENE 149 163808 - 164044 87 78 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1936 NR:ns ## KEGG: ECS88_1936 # Name: flhE # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 78 53 130 130 150 100.0 1e-35 MTLVAWRYQLIGPTPAGLRVRLCSQSRCVELEGQSGTTMAFSGIPAAEPLRFIWEVPGGG RLIPPLKIQRNEVIVNYR >gi|296918667|gb|GG773033.1| GENE 150 164188 - 165822 2031 544 aa, chain - ## HITS:1 COG:argS KEGG:ns NR:ns ## COG: argS COG0018 # Protein_GI_number: 16129828 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 544 1 544 577 1087 99.0 0 MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGNYQANGMMAVAKKLGMAPRQLAE QVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVAMPEKQTIVVDYS APNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQEN AGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQ ITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPM GVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPE SVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKL ANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQ LAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPIL SAES >gi|296918667|gb|GG773033.1| GENE 151 166038 - 166604 454 188 aa, chain + ## HITS:1 COG:yecM KEGG:ns NR:ns ## COG: yecM COG3102 # Protein_GI_number: 16129827 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 188 3 190 190 369 98.0 1e-102 MANWQSIDELQDIASDLPRFTHALDELSRRLGLDITPLTADHISLRCHQNVTAERWRRGF EQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEKRYPHEGWEHIEIVLPG DPETLNARALALLSDEGLSLPGISVKTSSPKGEHERLPNPTLAVTDGKTTIKFHPWSIEE IVASEQSA >gi|296918667|gb|GG773033.1| GENE 152 166618 - 167364 416 248 aa, chain + ## HITS:1 COG:ZcutCm KEGG:ns NR:ns ## COG: ZcutCm COG3142 # Protein_GI_number: 15804982 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Escherichia coli O157:H7 EDL933 # 1 248 1 248 248 486 97.0 1e-137 MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRP RGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLEVDGNVDMPRMEKIMAAAGPLAVTF HRAFDMCANPLNTLNNLTELGITRVLTSGQKSDALQGLSKIMELIAHRDAPIIMAGAGVR AENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSSDAHADEYLRYVVDGAAVAEMKG IIERHQAK >gi|296918667|gb|GG773033.1| GENE 153 167752 - 168852 577 366 aa, chain + ## HITS:1 COG:ECs2583 KEGG:ns NR:ns ## COG: ECs2583 COG3005 # Protein_GI_number: 15831837 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 719 97.0 0 MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHSMSKPFEEYQGTVHFSN QKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDSDDKFEAHRQEMAETVWKE LKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKDGETCIDCHKGIAHFPPEIKMDDN AAHELESQAATSVTNGAHIYPFKTSRIGDLATVTPGTDLTVVDVSGKQPIVRLQGYQMQG SENTLYLAAGQRLALATLSEEGIKALTVNGEWQADEYGNQWRQASLQGSLIDPALADRKP LWQYAEKLDDTYCAGCHAPIAADHYTVNAWPSIAKGMGARTSMSENELDILTRYFQYNAK DITEKQ >gi|296918667|gb|GG773033.1| GENE 154 168877 - 171279 2534 800 aa, chain + ## HITS:1 COG:bisZ KEGG:ns NR:ns ## COG: bisZ COG0243 # Protein_GI_number: 16129825 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 797 7 803 815 1597 98.0 0 MTLTRREFIKHSGIAAGTLVVTSAAPLPAWAEEKGGKILTAGRWGAMNVEVKDGKIVSST GALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNPLQPAKGRGEDTYVQVSWEQALK LIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAA QVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLK KSGKPVIAIDPICSETIEFFGDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKVFLEKYT TGYPQFEEYLTGKSDNTPKSAAWAAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQY GEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRVGGVLPEMSAAIAGQASEAAD DGGITAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQ KPEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARN DFDVFADLAELLKPGGKEIYTEGKDEMAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKL IEMRRSEKNEQYIRYGDFRADPVKNALGTPSGKIEIYSRTLEKFGYKDCPAHPTWLAPDE WKGTADEKQLQLLTAHPAHRLHSQLNYAELRKKYAVADREPITIHTEDAARFGIANGDLV RVWNKRGQILTGAVVTDGIKKGVVCVHEGAWLDLENGLCKNGSANVLTADIPSSQLANAC AGNTALVYIEKYTGNAPLAS >gi|296918667|gb|GG773033.1| GENE 155 171493 - 172464 1103 323 aa, chain - ## HITS:1 COG:yecP KEGG:ns NR:ns ## COG: yecP COG0500 # Protein_GI_number: 16129824 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 323 1 323 323 671 100.0 0 MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLL HSVTAESEEPLSAGQIKRIETLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSD LTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLG IEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPG DRYAQMRNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDP HDPGKTVEGYPAPKRAVLIARKP >gi|296918667|gb|GG773033.1| GENE 156 172461 - 173204 893 247 aa, chain - ## HITS:1 COG:ECs2580 KEGG:ns NR:ns ## COG: ECs2580 COG0500 # Protein_GI_number: 15831834 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 514 100.0 1e-146 MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQV YDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD IAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNM HHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVA LKAEDAA >gi|296918667|gb|GG773033.1| GENE 157 173245 - 173640 477 131 aa, chain - ## HITS:1 COG:ECs2579 KEGG:ns NR:ns ## COG: ECs2579 COG3788 # Protein_GI_number: 15831833 # Func_class: R General function prediction only # Function: Uncharacterized relative of glutathione S-transferase, MAPEG superfamily # Organism: Escherichia coli O157:H7 # 1 131 11 141 141 225 99.0 1e-59 MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIML MLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW YMPWELVFSLR >gi|296918667|gb|GG773033.1| GENE 158 173693 - 174511 560 272 aa, chain - ## HITS:1 COG:yecE KEGG:ns NR:ns ## COG: yecE COG1801 # Protein_GI_number: 16129821 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 272 1 272 272 538 98.0 1e-153 MIYIGLPQWSHPKWVRLGITNLEEYARNFNCVEGNTTLYALPKPEVVLRWREQTTDDFRF CFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDS LPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVILDSRPVHAARPHSEAIRDAQR KKPKVPVHAVLTAKNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQ APELVHTLWEDLRKTLPEIGAVPAIPQQSSLF >gi|296918667|gb|GG773033.1| GENE 159 174508 - 175074 587 188 aa, chain - ## HITS:1 COG:ECs2577 KEGG:ns NR:ns ## COG: ECs2577 COG1335 # Protein_GI_number: 15831831 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 188 12 199 199 374 99.0 1e-104 MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSA DYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRG IDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRS VEEILHAL >gi|296918667|gb|GG773033.1| GENE 160 175384 - 177156 2214 590 aa, chain + ## HITS:1 COG:aspS KEGG:ns NR:ns ## COG: aspS COG0173 # Protein_GI_number: 16129819 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 590 1 590 590 1193 99.0 0 MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLA SELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLDSNHVNTEEA RLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPS RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT APQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLK SVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKG LEGINSPVAKFLNAEIIEAILERTGAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLT DESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVING YEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTM LLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAENN >gi|296918667|gb|GG773033.1| GENE 161 177158 - 177601 342 147 aa, chain + ## HITS:1 COG:ECs2575 KEGG:ns NR:ns ## COG: ECs2575 COG0494 # Protein_GI_number: 15831829 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 3 147 6 150 150 276 99.0 1e-74 MAYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTI DVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKW LDASAAAALTKSWSNRQAIEQFVINAA >gi|296918667|gb|GG773033.1| GENE 162 177630 - 178370 926 246 aa, chain + ## HITS:1 COG:ECs2574 KEGG:ns NR:ns ## COG: ECs2574 COG0217 # Protein_GI_number: 15831828 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 444 100.0 1e-125 MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAIDKALSNN MTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKC GGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMG KVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISD EVAATL >gi|296918667|gb|GG773033.1| GENE 163 178405 - 178926 558 173 aa, chain + ## HITS:1 COG:ECs2573 KEGG:ns NR:ns ## COG: ECs2573 COG0817 # Protein_GI_number: 15831827 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 302 100.0 2e-82 MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQ PDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKS QVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR >gi|296918667|gb|GG773033.1| GENE 164 178928 - 179530 263 200 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1920 NR:ns ## KEGG: ECS88_1920 # Name: yebB # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 200 1 200 200 419 100.0 1e-116 MNINYPAEYEIGDIVFTCIGATLFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLST ITTLSRFIKRSANQRYAIKRLDAGLTEQQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSK FVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPG LVLIHAVGVETPQPELTEAV >gi|296918667|gb|GG773033.1| GENE 165 179806 - 180417 654 203 aa, chain + ## HITS:1 COG:ECs2571 KEGG:ns NR:ns ## COG: ECs2571 COG0632 # Protein_GI_number: 15831825 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Escherichia coli O157:H7 # 1 203 1 203 203 379 100.0 1e-105 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM VSKIARPDASSETLIREALRAAL >gi|296918667|gb|GG773033.1| GENE 166 180426 - 181436 1143 336 aa, chain + ## HITS:1 COG:ECs2570 KEGG:ns NR:ns ## COG: ECs2570 COG2255 # Protein_GI_number: 15831824 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Escherichia coli O157:H7 # 1 336 1 336 336 644 100.0 0 MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLI FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR LEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG TISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV LEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPEMP >gi|296918667|gb|GG773033.1| GENE 167 181653 - 182438 875 261 aa, chain - ## HITS:1 COG:ECs2569 KEGG:ns NR:ns ## COG: ECs2569 COG1108 # Protein_GI_number: 15831823 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 261 1 261 261 397 99.0 1e-110 MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAV IAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLL AVTPEDLISIAIGVVIVVAILFWQWRNLLSMTISPDLAFVDGVKLQRVKLLLMLVTALTI GVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAFYDTPAG PSVVLCAALLFILSMMKKQAS >gi|296918667|gb|GG773033.1| GENE 168 182435 - 183190 219 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 202 1 212 305 89 29 4e-16 MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGV IKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQAGHLINAPMQK LSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHD LHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFGPRGAEQLGIYRHHHNHRHDLQG RIVLRRGNDRS >gi|296918667|gb|GG773033.1| GENE 169 183254 - 184201 435 315 aa, chain + ## HITS:1 COG:ECs2567 KEGG:ns NR:ns ## COG: ECs2567 COG4531 # Protein_GI_number: 15831821 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Zn2+ transport system, periplasmic component/surface adhesin # Organism: Escherichia coli O157:H7 # 1 315 14 328 328 605 98.0 1e-173 MIGRIMLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIADGVTETQVLLPD GASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPEAKQVTIAQLEDVKPLLM KSIHDDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDA NLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGA QRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTLDPLGTNIKLGKTSYSEF LNQLANQYASCLKGD >gi|296918667|gb|GG773033.1| GENE 170 184280 - 185539 1296 419 aa, chain + ## HITS:1 COG:ECs2566 KEGG:ns NR:ns ## COG: ECs2566 COG0739 # Protein_GI_number: 15831820 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli O157:H7 # 1 419 1 419 419 823 100.0 0 MLGSLTVLTLAVAVWRPYVYHRDATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIP QDELDDKIAGEAGVHEYVVSTGDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSW TLTADGELQRLTWEVSRRETRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASAR NAGLTSAEVSAVIKAMQWQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKD YYAIRAEDGKFYDRNGTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAM PQGTPVLSVGDGEVVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIA LSGNTGRSTGPHLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD >gi|296918667|gb|GG773033.1| GENE 171 185658 - 186629 695 323 aa, chain + ## HITS:1 COG:msbB KEGG:ns NR:ns ## COG: msbB COG1560 # Protein_GI_number: 16129808 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli K12 # 1 323 1 323 323 654 99.0 0 METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGK SSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMVMMAELAIRGPEKIQPRVDWQGL EIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRF GGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVC RARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWIL KLLKTRKPGEIQPYKRKDLYPIK >gi|296918667|gb|GG773033.1| GENE 172 186771 - 188189 1411 472 aa, chain - ## HITS:1 COG:pykA KEGG:ns NR:ns ## COG: pykA COG0469 # Protein_GI_number: 16129807 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Escherichia coli K12 # 1 472 1 472 480 867 99.0 0 MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAK LGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPAD VVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKA DIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCSQEAMDDII LASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAE VMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDN VEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALY RGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTS >gi|296918667|gb|GG773033.1| GENE 173 188317 - 189186 599 289 aa, chain - ## HITS:1 COG:ECs2563 KEGG:ns NR:ns ## COG: ECs2563 COG1737 # Protein_GI_number: 15831817 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 537 99.0 1e-152 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEANVSEPTVNRFCRSMDT RGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINR AVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVV LISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR LAQLTVIDVLATGFTLRRGTKFRDNLKRVKEALKESRFDKQLLNLSDDR >gi|296918667|gb|GG773033.1| GENE 174 189524 - 190999 1822 491 aa, chain + ## HITS:1 COG:zwf KEGG:ns NR:ns ## COG: zwf COG0364 # Protein_GI_number: 16129805 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Escherichia coli K12 # 1 491 1 491 491 1011 99.0 0 MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTRIIGVGRADWDKAAYTK VVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFSRLGAMLDQKNRITINYFAMP PSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEINDQVGEYFEECQVYRIDHYLG KETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDMIQNHL LQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPG YLEEEGANKSSNTETFVAIRIDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLF KESWQDLPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQITKLDLSYSETFNQTHLADA YERLLLETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQAGTWGPVASVAMI TRDGRSWNEFE >gi|296918667|gb|GG773033.1| GENE 175 191234 - 193045 1690 603 aa, chain + ## HITS:1 COG:ECs2561 KEGG:ns NR:ns ## COG: ECs2561 COG0129 # Protein_GI_number: 15831815 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli O157:H7 # 1 603 1 603 603 1206 99.0 0 MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGNLAHGFAACQPEDKASL KSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVGQVAGGVPAMCDGVTQGQD GMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPGLTMAALSFGHLPAVFVPSGP MASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQ LPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWMPIGKMIDEKVVVNGIVALLATGGS TNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMARLYPNGPADINHFQAAGGVPVLVREL LKAGLLHEDVNTVAGFGLSRYTLEPWLNNGELDWREGAEKSLDNNVIASFEQPFSHHGGT KVLSGNLGRAVMKTSAVPVENQVIEAPAVVFESQHDVMPAFEAGLLDRDCVVVVRHQGPK ANGMPELHKLMPPLGVLLDRCFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRD GDIIRVNGQTGELTLLVDEAELAAREPHIPDLSASRVGTGRELFSALREKLSGAEQGATC ITF >gi|296918667|gb|GG773033.1| GENE 176 193082 - 193723 935 213 aa, chain + ## HITS:1 COG:STM1884 KEGG:ns NR:ns ## COG: STM1884 COG0800 # Protein_GI_number: 16765226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Salmonella typhimurium LT2 # 1 212 1 212 213 373 97.0 1e-103 MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAI AKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSE LMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLC IGGSWLVPADALEAGDYDRITKLAREAVEGAKL >gi|296918667|gb|GG773033.1| GENE 177 193791 - 194969 1370 392 aa, chain - ## HITS:1 COG:purT KEGG:ns NR:ns ## COG: purT COG0027 # Protein_GI_number: 16129802 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Escherichia coli K12 # 1 392 1 392 392 751 98.0 0 MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVIN MLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRL AAEELQLPTSTYRFADSENLFREAVAAIGYPCIVKPVMSSSGKGQTFIRSAEQLAHAWEY AQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQEDGDYRESWQPQQMS PLALERAQEIARKVVLALGGYGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEF ALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQNVTFDNVQNAVGADLQIRLFGKPEIDG SRRLGVALATAESVVDAIERAKHAAGQVKVQG >gi|296918667|gb|GG773033.1| GENE 178 195103 - 195393 367 96 aa, chain + ## HITS:1 COG:ECs2558 KEGG:ns NR:ns ## COG: ECs2558 COG3141 # Protein_GI_number: 15831812 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 148 100.0 2e-36 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA >gi|296918667|gb|GG773033.1| GENE 179 195460 - 195816 236 118 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_1203 NR:ns ## KEGG: ECIAI39_1203 # Name: yebF # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 118 5 122 122 222 100.0 4e-57 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWA DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR >gi|296918667|gb|GG773033.1| GENE 180 196143 - 196802 815 219 aa, chain + ## HITS:1 COG:ECs2556 KEGG:ns NR:ns ## COG: ECs2556 COG2979 # Protein_GI_number: 15831810 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 347 98.0 1e-95 MANWLNQLQSLLGQSRSSTSSSADQGLGKLLVPGALGGLAGLLVANKSARKLLTKYGTNA LLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERTERLILALVFAAKSDGHID AKERAAIDQQLREAGVEEKGRVLIEQAIEQPLDPQRLATGVRNEEEALEIYFLSCAAIDI DHFMERSYLNALGDALKIPQDVREGIERDLEQQKRTLAE >gi|296918667|gb|GG773033.1| GENE 181 197011 - 199071 1973 686 aa, chain + ## HITS:1 COG:ptrB KEGG:ns NR:ns ## COG: ptrB COG1770 # Protein_GI_number: 16129798 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Escherichia coli K12 # 1 686 1 686 686 1397 99.0 0 MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQENSYGHRVMASQQALQDR ILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQSAFSEEWDEWETLLDANKR AAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWA NDSWTFYYVRKHPVTLLPYQVWRHAIGTPASQDKLIYEEKDDTYYVSLHKTTSKHYVVIH LASSTTSEVRLLDAEMADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRM RDEQQWEELIPPRDNIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAY VTWIAYNPEPETARLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDAANYRSEHLW IVARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIV HVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGV AINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDN VTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFK SYEGVAMEYAFLVALAQGTLPAQSAD >gi|296918667|gb|GG773033.1| GENE 182 199068 - 199730 716 220 aa, chain - ## HITS:1 COG:exoX KEGG:ns NR:ns ## COG: exoX COG0847 # Protein_GI_number: 16129797 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli K12 # 1 220 1 220 220 459 100.0 1e-129 MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVAD KPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKT RKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYR GKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLENT >gi|296918667|gb|GG773033.1| GENE 183 199753 - 200409 447 218 aa, chain - ## HITS:1 COG:ECs2553 KEGG:ns NR:ns ## COG: ECs2553 COG0388 # Protein_GI_number: 15831807 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 218 1 218 218 442 99.0 1e-124 MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSRRALPAP PDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSYGACLGRR SRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARGN SALWDEHGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR >gi|296918667|gb|GG773033.1| GENE 184 200511 - 200741 308 76 aa, chain - ## HITS:1 COG:no KEGG:ECP_1786 NR:ns ## KEGG: ECP_1786 # Name: not_defined # Def: DNA polymerase III, theta subunit; region: DNA_pol3_theta; cl11635 (EC:2.7.7.7) # Organism: E.coli_536 # Pathway: Purine metabolism [PATH:ecp00230]; Pyrimidine metabolism [PATH:ecp00240]; Metabolic pathways [PATH:ecp01100]; DNA replication [PATH:ecp03030]; Mismatch repair [PATH:ecp03430]; Homologous recombination [PATH:ecp03440] # 1 76 30 105 105 136 100.0 3e-31 MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQPEHLRSWFRERLIAHR LASVNLSRLPYEPKLK >gi|296918667|gb|GG773033.1| GENE 185 200880 - 201254 346 124 aa, chain + ## HITS:1 COG:yobA KEGG:ns NR:ns ## COG: yobA COG2372 # Protein_GI_number: 16129794 # Func_class: R General function prediction only # Function: Uncharacterized protein, homolog of Cu resistance protein CopC # Organism: Escherichia coli K12 # 1 124 1 124 124 224 100.0 4e-59 MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGF SGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYT FSVK >gi|296918667|gb|GG773033.1| GENE 186 201258 - 202130 668 290 aa, chain + ## HITS:1 COG:ECs2550 KEGG:ns NR:ns ## COG: ECs2550 COG1276 # Protein_GI_number: 15831804 # Func_class: P Inorganic ion transport and metabolism # Function: Putative copper export protein # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 471 98.0 1e-133 MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLTKRFLRLQQHAAVWSLISATA MLAVQGGLMGTGWSDVFSPNIWLAVLQTQFGGVWLWQIVLALVTLIVALMQPRNMPRLLF MLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWR HQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVI ALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF >gi|296918667|gb|GG773033.1| GENE 187 202143 - 202484 315 113 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1893 NR:ns ## KEGG: ECS88_1893 # Name: yebY # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 113 1 113 113 196 100.0 4e-49 MMRKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPS TLVQYPLNDIAQKEVASGKTKAQPISVIQIDDPNNPGEKMSLAPFIERAEKLC >gi|296918667|gb|GG773033.1| GENE 188 202879 - 203535 439 218 aa, chain + ## HITS:1 COG:pphA KEGG:ns NR:ns ## COG: pphA COG0639 # Protein_GI_number: 16129791 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Escherichia coli K12 # 1 218 2 219 219 416 97.0 1e-116 MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGPQ SLRCLQLLEQHWVRAVRGNHEQMAMDALASRQMSLWLINGGDWFIALADNHQKQAKTALE KCQHLPFILELHSRTGKHVIAHADYPDDVYEWQKDVDLHQVLWSRSRLGERQKGQGIAGA DHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ >gi|296918667|gb|GG773033.1| GENE 189 203536 - 203811 137 91 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1890 NR:ns ## KEGG: ECS88_1890 # Name: yebW # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 91 1 91 91 191 100.0 1e-47 MAGYLSGLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCEDIVVDVYNTEQQCLYS MSDQRIRHGGCFPIEDFIDGFWRPAQEYGDF >gi|296918667|gb|GG773033.1| GENE 190 203832 - 204068 228 78 aa, chain - ## HITS:1 COG:no KEGG:ECDH10B_1975 NR:ns ## KEGG: ECDH10B_1975 # Name: yebV # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 78 1 78 78 157 100.0 2e-37 MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAWDAETSIPALLNGEHSV LYRTRYDQQSDAWIMRLA >gi|296918667|gb|GG773033.1| GENE 191 204186 - 205580 1220 464 aa, chain - ## HITS:1 COG:yebU_1 KEGG:ns NR:ns ## COG: yebU_1 COG0144 # Protein_GI_number: 16129788 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Escherichia coli K12 # 1 368 18 385 385 738 97.0 0 MREAMPSTLSFDDFLAACQRPLRRSIRVNTLKTSVADFLQLTAPYGWTLTPIPWCEEGFW IERDSEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQI AARMNNKGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRLGGTLVYSTCTLNREENE AVCLWLKETYHDAVEFLPLGDLFPGANKALTEDGFLHVFPQIYDCEGFFVARLRKTQAIP VLPAPKYKVGNFPFSPVKDREAGQIRQAAASVGLNWDENLRLWQRDKELWLFPVGIEALI GKVRFSRLGIKLAETHNKGYRWQHEAVIALASPDNVNAFELTPQEAEEWYRGRDVYPQAA PVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTGNA >gi|296918667|gb|GG773033.1| GENE 192 205705 - 208344 2562 879 aa, chain - ## HITS:1 COG:yebT KEGG:ns NR:ns ## COG: yebT COG3008 # Protein_GI_number: 16129787 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Escherichia coli K12 # 1 879 1 879 879 1723 99.0 0 MHMSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRGNTVTIDFMSADG IVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLA GVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLSSGSL VYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKV KLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPGGAGLTADST PLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRKNTRIELRNPKLSLSDANLSAL LTGKTFELVPGDGEPRKEFVVVPGEKALLQEPDVLTLTLTAPESYGIDAGQPLILHGVQV GQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWIN GGIRILPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKF EVGEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRA LKGAISFDNLSGASASQRKGDKRILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGI DIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPY INVEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTG MTLGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGI AFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK >gi|296918667|gb|GG773033.1| GENE 193 208307 - 209590 827 427 aa, chain - ## HITS:1 COG:ECs2543 KEGG:ns NR:ns ## COG: ECs2543 COG2995 # Protein_GI_number: 15831797 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Escherichia coli O157:H7 # 1 427 1 427 427 847 99.0 0 MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRD GRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGAM VFFCVIGAPLILVTSIAYLWFGNQLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQ DYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTG YPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTIL SGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWI GRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHES GNARFDD >gi|296918667|gb|GG773033.1| GENE 194 209720 - 210217 301 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 3 159 6 161 165 120 41 1e-25 MNKAEFYADLNRDFNALMVGETSFLATLANTSALLYERLTDVNWAGFYLLEDDTLVLGPF QGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDAASNSEIVLPLVVKNQIIG VLDIDSTVFGRFTDEDAQGLRQLVAQLEKVLATTDYKKFFASVAG >gi|296918667|gb|GG773033.1| GENE 195 210314 - 211012 502 232 aa, chain + ## HITS:1 COG:proQm KEGG:ns NR:ns ## COG: proQm COG3109 # Protein_GI_number: 16132234 # Func_class: T Signal transduction mechanisms # Function: Activator of osmoprotectant transporter ProP # Organism: Escherichia coli K12 # 1 232 1 232 232 385 99.0 1e-107 MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSA LRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAK KREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRSQKPVEKAPKTVKAPREEQHTPV SDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF >gi|296918667|gb|GG773033.1| GENE 196 211032 - 213080 1944 682 aa, chain + ## HITS:1 COG:prc KEGG:ns NR:ns ## COG: prc COG0793 # Protein_GI_number: 16129784 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Escherichia coli K12 # 1 682 1 682 682 1318 99.0 0 MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATVSERVTSRFTRSHYRQF DLDQAFSAKIFDRYLNLLDYSHNVLLESDVEQFAKKKTELGDELRSGKLDVFYDLYNLAQ KRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEAELNALWDSKVKFDELSLKLT GKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTE MSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRL DDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLTRERIRLEDRAVKMSVKTVGKEKVGVL DIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPSGPIVQVR DNNGKVREDSDTDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTV QQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDIIMPTGNEETETG EKFEDNALPWDSIDAATYVKSGDLTAFEPELLKEHNARIAKDPEFQNIMKDIARFNAMKD KRNIVSLNYAVREKENNEDDATRLARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETV NIALDLAKLEKARPAEQPAPVK >gi|296918667|gb|GG773033.1| GENE 197 213272 - 214132 815 286 aa, chain + ## HITS:1 COG:ECs2539 KEGG:ns NR:ns ## COG: ECs2539 COG0501 # Protein_GI_number: 15831793 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 286 1 286 293 533 100.0 1e-151 MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGFGGSFVSLLMSKWMALR SVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAPDINAFATGARRDASLVAV STGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVNTFVIFISRILAQLAAGFMGG NRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFSRHREFHADAGSAKLVGREKMIA ALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTHPPLDKRIEAL >gi|296918667|gb|GG773033.1| GENE 198 214200 - 215573 1020 457 aa, chain - ## HITS:1 COG:yebQ KEGG:ns NR:ns ## COG: yebQ COG0477 # Protein_GI_number: 16129782 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 457 38 494 494 747 99.0 0 MPKVQADGLPLPLRYGAILTIVIGISMAVLDGAIANVALPTIATDLHATPASSIWVVNAY QIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAA LMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLG IIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLLITALSGFAQGQSLTLIGAELVV MVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLG RSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPAD INIIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALML NQFGDNGTHVSLIAAAILAVIAACVSGLRITQPRSRA >gi|296918667|gb|GG773033.1| GENE 199 215750 - 216541 847 263 aa, chain + ## HITS:1 COG:ECs2537 KEGG:ns NR:ns ## COG: ECs2537 COG1414 # Protein_GI_number: 15831791 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 491 99.0 1e-139 MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKTLGY VAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISRLTKETIHLGALDEDSIVY IHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEVMQILEGVEYKRSTERTITST EALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTLRFSEERLQE YVAMLHTAARKISAQMGYHDYPF >gi|296918667|gb|GG773033.1| GENE 200 216685 - 216924 236 79 aa, chain - ## HITS:1 COG:no KEGG:ECB_01797 NR:ns ## KEGG: ECB_01797 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 79 1 79 79 141 100.0 1e-32 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF LGITDCPLLRKSNIVVDNG >gi|296918667|gb|GG773033.1| GENE 201 217301 - 217588 242 95 aa, chain + ## HITS:1 COG:no KEGG:JW1814 NR:ns ## KEGG: JW1814 # Name: yebO # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 95 1 95 95 134 100.0 1e-30 MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIELLEALLDQQKRQNALL RRLCEANEPEKADKKTVESQKSVEDEDIIRLVAER >gi|296918667|gb|GG773033.1| GENE 202 218415 - 218624 332 69 aa, chain + ## HITS:1 COG:ECs2533 KEGG:ns NR:ns ## COG: ECs2533 COG1278 # Protein_GI_number: 15831787 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 120 100.0 5e-28 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG PAAVNVTAI >gi|296918667|gb|GG773033.1| GENE 203 218874 - 219599 552 241 aa, chain + ## HITS:1 COG:rrmA KEGG:ns NR:ns ## COG: rrmA COG0500 # Protein_GI_number: 16129776 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 241 29 269 269 480 96.0 1e-136 MAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVGQLRERLDEKAAA VLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTS MDAIIRIYAPCKAEELVRVVKPGGWVITATPGPRHLIELKGLIYNEVHLHAPHAEQLKGF TLQQSDELCYLMRLRGDEAVALLQMTPFAWRAKPEVWQALAAKEVFDCQTDFNIHLWQRS Y >gi|296918667|gb|GG773033.1| GENE 204 219596 - 220162 608 188 aa, chain - ## HITS:1 COG:ECs2531 KEGG:ns NR:ns ## COG: ECs2531 COG1971 # Protein_GI_number: 15831785 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 188 19 206 206 324 100.0 5e-89 MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGML ASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAM AVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ ILWTHFHG >gi|296918667|gb|GG773033.1| GENE 205 220591 - 221049 293 152 aa, chain - ## HITS:1 COG:yobD KEGG:ns NR:ns ## COG: yobD COG4811 # Protein_GI_number: 16129774 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 152 1 152 152 256 99.0 9e-69 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG VLVMQLEQRRLLIRVRNIDDLEKVYKLLVSTQ >gi|296918667|gb|GG773033.1| GENE 206 221124 - 221975 1029 283 aa, chain - ## HITS:1 COG:ECs2529 KEGG:ns NR:ns ## COG: ECs2529 COG3716 # Protein_GI_number: 15831783 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 283 4 286 286 559 100.0 1e-159 MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCFSMVPAIRRLYPENNEA RKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDGAINGIKVGLMGPLAGVGD PIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLATRYYGVAYGYSKGIDIVKDM GGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSRITDQTGKEHVTTVQTILDQLMP GLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGYACGLLGL >gi|296918667|gb|GG773033.1| GENE 207 221988 - 222788 1005 266 aa, chain - ## HITS:1 COG:ECs2528 KEGG:ns NR:ns ## COG: ECs2528 COG3715 # Protein_GI_number: 15831782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 394 100.0 1e-109 MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIA LGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPLAAAGQVLTIIVRTITVAF QHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEVVTN GLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVLYIQ LSPKYNRVAGAPAQAAGNNDLDNELD >gi|296918667|gb|GG773033.1| GENE 208 222851 - 223822 1262 323 aa, chain - ## HITS:1 COG:ECs2527_2 KEGG:ns NR:ns ## COG: ECs2527_2 COG3444 # Protein_GI_number: 15831781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 158 323 1 166 166 311 100.0 2e-84 MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYNAQLAKLDTTK GVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETLMARDDDPSFDELVALAVE TGREGVKALKAKPVEKAAPAPATAAPKAAPTPAKPMGPNDYMVIGLARIDDRLIHGQVAT RWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERV MLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQVNNAVSVDEKDIEAFKKLNARGIE LEVRKVSTDPKLKMMDLISKIDK >gi|296918667|gb|GG773033.1| GENE 209 224285 - 225841 1794 518 aa, chain + ## HITS:1 COG:yoaE_2 KEGG:ns NR:ns ## COG: yoaE_2 COG1253 # Protein_GI_number: 16129770 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli K12 # 231 518 1 288 288 540 100.0 1e-153 MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLG LLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGK GYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVN QHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQS TLPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRSL RGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEEG VDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIAG EFPDADETPEIITDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVAGLVISANGHIPR VGDVIDVGPLHITIIEANDYRVDLVRIVKEQPAHDEDE >gi|296918667|gb|GG773033.1| GENE 210 225845 - 227443 1108 532 aa, chain - ## HITS:1 COG:yoaD_2 KEGG:ns NR:ns ## COG: yoaD_2 COG2200 # Protein_GI_number: 16129769 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 261 532 1 272 272 559 99.0 1e-159 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV VDILAELPAPQPLLRLTTDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ LPQISSASLTVDSRHLLYGNGLVDSLPQPENNENYQVSSQRFPFTINVNGPGATALAWHY LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE QAKYLRRHGVHILQGYLYAQPMPLCDFPKWLAGSQPPPARHNGHITPIMPLR >gi|296918667|gb|GG773033.1| GENE 211 227574 - 228938 1462 454 aa, chain - ## HITS:1 COG:sdaA KEGG:ns NR:ns ## COG: sdaA COG1760 # Protein_GI_number: 16129768 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli K12 # 1 454 1 454 454 924 99.0 0 MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTRVAVDVYGSLSLTGKGH HTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGRHEVDFPRDNGMRFHNGNL PLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQDAANEVSVPYPFKSATELLAY CNETGFSLSGLAMQNELALHSKKEIDEYFAHVWQTMQACIDRGMNTEGVLPGPLRVPRRA SALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYY DHFIESVSPDIYTRYFMAAGAIGALYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGG SPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINAARMALRRTSAPRVS LDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD >gi|296918667|gb|GG773033.1| GENE 212 229122 - 229700 460 192 aa, chain - ## HITS:1 COG:ECs2522 KEGG:ns NR:ns ## COG: ECs2522 COG0494 # Protein_GI_number: 15831776 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 192 1 192 192 344 100.0 7e-95 MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAG QVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIP PDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGI IRELALQIGVKP >gi|296918667|gb|GG773033.1| GENE 213 229704 - 231065 879 453 aa, chain - ## HITS:1 COG:ECs2521 KEGG:ns NR:ns ## COG: ECs2521 COG0147 # Protein_GI_number: 15831775 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 914 97.0 0 MKTLSPAVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYSRFDIVVAEPICTLTTF GKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPAHNEDLPFQGGALGLFGYDLGRRFES LPEIAQQDIVLPDMAVGIYDWALVVDHQRQTVSLLSHNDVNARRAWLESQQFSPQEDFTL TSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDEWQAFLQLNQANRAP FSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGTLPRLPDPQEDSKQAEKLANSAKDR AENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITAQLPEQLHASDLLRA AFPGGSITGAPKVRAMEIIDELEPHRRNAWCGSIGYLSFCGNMDTSITIRTLTAINGQIY CSAGGGIVADSQEEAEYQETFDKVNKILRQLEK >gi|296918667|gb|GG773033.1| GENE 214 231139 - 231318 313 59 aa, chain + ## HITS:1 COG:ECs2520 KEGG:ns NR:ns ## COG: ECs2520 COG3140 # Protein_GI_number: 15831774 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 59 1 59 59 83 100.0 1e-16 MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRANHSGERIVARFEDEDE >gi|296918667|gb|GG773033.1| GENE 215 231438 - 231737 235 99 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1862 NR:ns ## KEGG: ECS88_1862 # Name: yoaC # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 99 21 119 119 189 100.0 3e-47 MPAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITTRADLEGWNP GFTEKMVGWAKKMESGERIVIKNPEYFSTYMQEELKALV >gi|296918667|gb|GG773033.1| GENE 216 232159 - 232503 495 114 aa, chain - ## HITS:1 COG:yoaB KEGG:ns NR:ns ## COG: yoaB COG0251 # Protein_GI_number: 16129763 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 114 17 130 130 207 99.0 3e-54 MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFDQTANTLAQIDAVLEKQGSNKSSI LDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV >gi|296918667|gb|GG773033.1| GENE 217 232635 - 234545 1599 636 aa, chain + ## HITS:1 COG:ECs2517 KEGG:ns NR:ns ## COG: ECs2517 COG1199 # Protein_GI_number: 15831771 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Escherichia coli O157:H7 # 1 636 1 636 636 1262 99.0 0 MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPAL RAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGG DLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPMYKDCF VVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQLPDIASQYFGQ SLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLA NPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLKEINQPGYSYW YECTSRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGIELAESL LLPSPFDYSRQALLCVPRNLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRDL AEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKL PFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNR LVMRPYGATFLASLPPAPRTRDIARAVRFLAIPSSR >gi|296918667|gb|GG773033.1| GENE 218 234603 - 235298 598 231 aa, chain + ## HITS:1 COG:ECs2516 KEGG:ns NR:ns ## COG: ECs2516 COG1214 # Protein_GI_number: 15831770 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 449 99.0 1e-126 MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQDILTTSGTSLTDINALA YGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGAWRKNGATRVLAAIDARMG EVYWAEYQRDENGIWHGEETEAVLKPELVHERMQQLSGEWVTVGTGWQAWPDLGKESGLV LRDGEELLPAAEDMLPIACQMFAEGKTVAVEHAEPVYLRNNVAWKKLPGKE >gi|296918667|gb|GG773033.1| GENE 219 235338 - 235919 593 193 aa, chain + ## HITS:1 COG:ECs2515 KEGG:ns NR:ns ## COG: ECs2515 COG3065 # Protein_GI_number: 15831769 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Starvation-inducible outer membrane lipoprotein # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 360 98.0 1e-100 MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRVMSAPQLYVGQEARFGG KVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVNGFLDPVDFRGQLVTVVGP ITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPIDPWFYGGRGWPYGYGGWGWY NPGPARVQTVVTE >gi|296918667|gb|GG773033.1| GENE 220 236058 - 237809 1716 583 aa, chain + ## HITS:1 COG:fadD KEGG:ns NR:ns ## COG: fadD COG0318 # Protein_GI_number: 16129759 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli K12 # 23 583 1 561 561 1147 99.0 0 MLTICLLLGVAMTTNTHFRGEELKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYAD QPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAG MIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLST AKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQ NLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQ QVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNE VPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMI LVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCR RQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA >gi|296918667|gb|GG773033.1| GENE 221 237891 - 239006 1099 371 aa, chain + ## HITS:1 COG:ECs2513 KEGG:ns NR:ns ## COG: ECs2513 COG0349 # Protein_GI_number: 15831767 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Escherichia coli O157:H7 # 1 371 5 375 375 726 99.0 0 MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWS PLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEE YSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECR LMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHL WSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQALPEEALPQPMLNLMDMPGYR KAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAE ALHNLLQEYPQ >gi|296918667|gb|GG773033.1| GENE 222 239584 - 240222 511 212 aa, chain + ## HITS:1 COG:ECs2507 KEGG:ns NR:ns ## COG: ECs2507 COG1280 # Protein_GI_number: 15831761 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 212 1 212 212 357 98.0 7e-99 MFAEYGVLNYWTYLVGAIFIVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFL AWAGVATLIKTTPILFNIVRYLGAFYLLYLGSKILYATLKGKNSETKSDEPQYGAIFKRA LILSLTNPKAILFYVSFFVQFIDVNAPHTGISFFILATTLELVSFCYLSFLIISGAFVTQ YIRTKKKLAKVGNSLIGLMFVGFAARLATLQS >gi|296918667|gb|GG773033.1| GENE 223 240395 - 240754 368 119 aa, chain + ## HITS:1 COG:ECs2506 KEGG:ns NR:ns ## COG: ECs2506 COG3615 # Protein_GI_number: 15831760 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein/domain, possibly involved in tellurite resistance # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 243 100.0 6e-65 MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHS AEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK >gi|296918667|gb|GG773033.1| GENE 224 240758 - 240940 274 60 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_2521 NR:ns ## KEGG: ECH74115_2521 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 60 1 60 60 96 100.0 4e-19 MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVNTVRSYDTENEHDVCGW >gi|296918667|gb|GG773033.1| GENE 225 241088 - 241336 321 82 aa, chain + ## HITS:1 COG:YPO1181 KEGG:ns NR:ns ## COG: YPO1181 COG2261 # Protein_GI_number: 16121476 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 82 26 107 107 99 82.0 2e-21 MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGGWISTLFGFGKVDGFNF GSFVVAVIGAIVVLFIYRKIKS >gi|296918667|gb|GG773033.1| GENE 226 241560 - 242585 754 341 aa, chain - ## HITS:1 COG:yeaP_2 KEGG:ns NR:ns ## COG: yeaP_2 COG2199 # Protein_GI_number: 16129748 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 168 341 1 174 174 345 98.0 8e-95 MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKVDVEARLQHIMFARNSQ KMHIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCVAARNLGITTFLSTPIHLPDGS FYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALVEQLREANAALIAQSYTDSLT GLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKLINDRFGHNSGDLFLIQVGERLN TLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGI VEVDPETTDADSALHAADIAMYQEKKHKQKTPFVTHSALHS >gi|296918667|gb|GG773033.1| GENE 227 242768 - 243022 147 84 aa, chain + ## HITS:1 COG:yoaF KEGG:ns NR:ns ## COG: yoaF COG3042 # Protein_GI_number: 16129747 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Escherichia coli K12 # 1 84 1 84 84 154 100.0 3e-38 MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQKGGTLIPVQTAQGVSNN CKLPGGETIDEWALWRRDHPAGEK >gi|296918667|gb|GG773033.1| GENE 228 243044 - 243391 392 115 aa, chain - ## HITS:1 COG:ECs2501 KEGG:ns NR:ns ## COG: ECs2501 COG3189 # Protein_GI_number: 15831755 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 115 8 122 122 223 100.0 7e-59 MNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEITPSTELRKAFHGEVVD FATFREQYLAELAQHEQEGKRLADIAKKQPLTLLYSAKNTTQNHALVLADWLRSL >gi|296918667|gb|GG773033.1| GENE 229 243446 - 244627 654 393 aa, chain - ## HITS:1 COG:ECs2500 KEGG:ns NR:ns ## COG: ECs2500 COG2807 # Protein_GI_number: 15831754 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 637 99.0 0 MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLL AFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNV LLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVAPLALNGFGWQGALLMLMCFPLLA LFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILIS HGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAAGLCFMPAH AITWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHD ANGDWSVPLLGVAILSLLMAIFGLCAGRDKEIR >gi|296918667|gb|GG773033.1| GENE 230 244727 - 245545 311 272 aa, chain + ## HITS:1 COG:yeaM KEGG:ns NR:ns ## COG: yeaM COG2207 # Protein_GI_number: 16129744 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 272 2 273 273 507 98.0 1e-144 MHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWM VPPQYAVWIPGGVKHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANR TTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHLKIRTMVEMMAKEPVEWGSLGQWA GFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFI TMFKKGLGQTPGRYIAGLTTVSPQSAKPDPRQ >gi|296918667|gb|GG773033.1| GENE 231 245502 - 245948 602 148 aa, chain - ## HITS:1 COG:yeaL KEGG:ns NR:ns ## COG: yeaL COG2707 # Protein_GI_number: 16129743 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 148 1 148 148 188 100.0 3e-48 MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFPWIEKQGLSIGIIILTI GVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRGVTLMGSQPQLVAGLLVGT VLGVALFRGVPVGPLIAAGLVSLIVGKQ >gi|296918667|gb|GG773033.1| GENE 232 246223 - 246726 501 167 aa, chain - ## HITS:1 COG:ECs2496 KEGG:ns NR:ns ## COG: ECs2496 COG2606 # Protein_GI_number: 15831750 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 318 99.0 2e-87 MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK LVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA >gi|296918667|gb|GG773033.1| GENE 233 246768 - 248240 944 490 aa, chain - ## HITS:1 COG:yeaJ_2 KEGG:ns NR:ns ## COG: yeaJ_2 COG2199 # Protein_GI_number: 16129740 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 325 490 1 166 166 326 100.0 7e-89 MLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQRADSSFLYDKYQNQSIAAHVMR ALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAAL LPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQS GSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLR NIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDIL YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL QKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE FCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLY VNKQNKNSRS >gi|296918667|gb|GG773033.1| GENE 234 248439 - 249782 729 447 aa, chain - ## HITS:1 COG:yeaI_2 KEGG:ns NR:ns ## COG: yeaI_2 COG2199 # Protein_GI_number: 16129739 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 267 447 1 181 181 354 99.0 2e-97 MVSMGTQKLKAQGFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVI FLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYI FRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLY VVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLL LTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFN SVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARL EGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTHNI SLVMTEADKALREAKSEGGNKVIIHHI >gi|296918667|gb|GG773033.1| GENE 235 250061 - 251344 945 427 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 [Phaeobacter gallaeciensis BS107] # 1 418 1 433 445 368 44 1e-100 MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAINKRSVTDVDSGESVSIPTEDIS EPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQGQASQDGEGQDEFVFQIS KDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGVPANISVVRSLQNSLARRTAM TAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAELRAKIERVPFIDTFDLRYKNYE KRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKE VDEHEFFYSQETGGTIVSSALKLMDEVVKERYNPAQWNIYAAQASDGDNWADDSPLCHEI LAKKILPVVRYYSYIEITRRAHQTLWREYEHLQSTFDNFAMQHIRDQDDIYPVFRELFHK QNATAKD >gi|296918667|gb|GG773033.1| GENE 236 251457 - 253391 1939 644 aa, chain - ## HITS:1 COG:ECs2492 KEGG:ns NR:ns ## COG: ECs2492 COG2766 # Protein_GI_number: 15831746 # Func_class: T Signal transduction mechanisms # Function: Putative Ser protein kinase # Organism: Escherichia coli O157:H7 # 1 644 1 644 644 1293 100.0 0 MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRL SRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLA ERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWA AKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQN DPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIIL AHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGT LETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLS TRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYA EFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKI EKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVIS FNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS >gi|296918667|gb|GG773033.1| GENE 237 253827 - 254573 886 248 aa, chain + ## HITS:1 COG:yeaF KEGG:ns NR:ns ## COG: yeaF COG3713 # Protein_GI_number: 16129736 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Escherichia coli K12 # 1 248 1 248 248 467 100.0 1e-132 MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFW FRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQ YGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKE SARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLI STGITYKF >gi|296918667|gb|GG773033.1| GENE 238 254663 - 255517 852 284 aa, chain + ## HITS:1 COG:ECs2490 KEGG:ns NR:ns ## COG: ECs2490 COG0656 # Protein_GI_number: 15831744 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 537 97.0 1e-153 MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGA EKVVGEALIGLRDNVFLVSKVYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAL EETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLL PWCQKQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHAHNISAAQVLLAWVISHQGVMAI PKAATVAHVQQNAAVLEVELSSAELAMLDKAYPAPKGKTALDMV >gi|296918667|gb|GG773033.1| GENE 239 255568 - 256452 945 294 aa, chain - ## HITS:1 COG:yeaD KEGG:ns NR:ns ## COG: yeaD COG0676 # Protein_GI_number: 16129734 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzymes related to aldose 1-epimerase # Organism: Escherichia coli K12 # 1 294 8 301 301 606 97.0 1e-173 MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQGAHLLSWKPAGEEEVLW LSNNTPFKNGVAIRGGIPVCWPWFGPAAQQGLPAHGFARNLPWALKSHREDADGVALTFE LTQSEETKKFWPHDFTLLAHFHVGKTCEIDLEAHGEFETTSALHTYFNVGDIAKVSVSGL GDRFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGHQHHLNVV GWNPGPALSVSMGDMPDDGYKTFVCVETAYASETQKVTKEKPAHLAQSIRVAKR >gi|296918667|gb|GG773033.1| GENE 240 256536 - 257531 1062 331 aa, chain - ## HITS:1 COG:ECs2488 KEGG:ns NR:ns ## COG: ECs2488 COG0057 # Protein_GI_number: 15831742 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 635 100.0 0 MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEV KDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMT GPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATT ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV VDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA LNDNFVKLVSWYDNETGYSNKVLDLIAHISK >gi|296918667|gb|GG773033.1| GENE 241 257873 - 258286 229 137 aa, chain + ## HITS:1 COG:ECs2487 KEGG:ns NR:ns ## COG: ECs2487 COG0229 # Protein_GI_number: 15831741 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 283 99.0 5e-77 MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKY DSGCGWPSFYEPLSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDGPQPTGERYCVN SASLRFTDGENGEEING >gi|296918667|gb|GG773033.1| GENE 242 258328 - 258600 325 90 aa, chain + ## HITS:1 COG:ECs2486 KEGG:ns NR:ns ## COG: ECs2486 COG3139 # Protein_GI_number: 15831740 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 90 16 105 105 166 97.0 7e-42 MNLDDIINSMTPEVYQRLSTAVELGKWPDGVTLTEEQKENCLQLVMLWQARHNTEAQHMT IDTNGQMVMKSKQQLKEDFGISAKPIAMFK >gi|296918667|gb|GG773033.1| GENE 243 258970 - 260046 1192 358 aa, chain + ## HITS:1 COG:ECs2485 KEGG:ns NR:ns ## COG: ECs2485 COG1063 # Protein_GI_number: 15831739 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 358 1 358 358 737 99.0 0 MKALARFGKAFGGYKMIDVPQPICGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRG HEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWG GGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPICNAYKSIAQQAKFLPGQDVVV IGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQ ICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGH MAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTYDFDE >gi|296918667|gb|GG773033.1| GENE 244 260073 - 261452 1008 459 aa, chain + ## HITS:1 COG:ydjK KEGG:ns NR:ns ## COG: ydjK COG0477 # Protein_GI_number: 16129729 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 459 1 459 459 830 99.0 0 MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGLILAQLKALGWTDNSTT ATFSAITTAGMFLGALVGGIIGDKTGRRNAFILYEAIHIASMVVGAFSPNMDFLIACRFV MGVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSYPLCSLIAMGLTPLISAEWNW RVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEAEKVMRSIEEGVIRQTGKPLPPV VIADDGKAPQAVPYSALLTGVLLKRVILGSCVLIAMNVVQYTLINWLPTIFMTQGINLKD SIVLNTMSMFGAPFGIFIAMLVMDKIPRKTMGMGLLILIAVLGYIYSLQTSMLLITLIGF FLITFVYMYVCYASAVYVPEIWPTEAKLRGSGLANAVGRISGIAAPYAVAVLLSSYGVTG VFILLGAVSIIVAIAIATIGIETKGVSVESLSIDAVANK >gi|296918667|gb|GG773033.1| GENE 245 261469 - 262512 856 347 aa, chain + ## HITS:1 COG:ydjJ KEGG:ns NR:ns ## COG: ydjJ COG1063 # Protein_GI_number: 16129728 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 347 1 347 347 701 99.0 0 MKNSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFESGPFIPPKDPNQE IGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPN YRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHAAMLADVKPGKKIIILGAGCI GLMTLQACKCLGATEIAVVDVLEKRLTMAEQLGATVVINGAKEDTIARCQQFTEDMGADI VFETAGSAVTVKQAPYLVMRGGKIMIVGTVPGDSAINFLKINREVTIQTVFRYANRYPVT IEAISSGRFDVKSMVTHIYDYRDVQQAFEESVNNKRDIIKGVIKISD >gi|296918667|gb|GG773033.1| GENE 246 262533 - 263369 701 278 aa, chain + ## HITS:1 COG:ydjI KEGG:ns NR:ns ## COG: ydjI COG0191 # Protein_GI_number: 16129727 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli K12 # 1 278 1 278 278 552 98.0 1e-157 MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPIIISFGTGFVGNTSFED FSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAV DFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGV YTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVA VKENQDQPFLHLEREVRKAIKERALDKIKLFGSDGKAE >gi|296918667|gb|GG773033.1| GENE 247 263374 - 264321 710 315 aa, chain + ## HITS:1 COG:ydjH KEGG:ns NR:ns ## COG: ydjH COG0524 # Protein_GI_number: 16129726 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 1 315 8 322 322 607 99.0 1e-173 MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTAL MSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWK LNIDDVDFARFSQAKLLSLASIFNSPLLDGRALTEIFTQAKARQMIICADMIKPRLNETL NDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSIGATTGV KNRKLVEQLLEEYEG >gi|296918667|gb|GG773033.1| GENE 248 264376 - 265311 818 311 aa, chain + ## HITS:1 COG:ydjG KEGG:ns NR:ns ## COG: ydjG COG0667 # Protein_GI_number: 16129725 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 311 16 326 326 632 98.0 0 MGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKL PREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVKASLQRLGIDYIDIYMT HWQSVPPFFTPIAETVAVLNALKAEGKIRAIGAANVDADHIREYLQHGELDIIQAKYSIL DRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVID MLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAALNINLSDADAT LMREMAEALER >gi|296918667|gb|GG773033.1| GENE 249 265448 - 266206 546 252 aa, chain + ## HITS:1 COG:ECs2479 KEGG:ns NR:ns ## COG: ECs2479 COG1349 # Protein_GI_number: 15831733 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 464 100.0 1e-131 MAAKDRIQAIKQMVANDKKVTVSNLSGIFQVTEETIRRDLEKLEDEGFLTRTYGGAVLNT AMLTENIHFYKRASSFYEEKQLIARKALPFIDNKTTMAADSSSTVMELLKLLQDRSDLTL LTNSAEAIHVLAQSEIKVVSTGGELNKNTLSLQGRITKEIISRYHVDIMVMSCKGLDINS GALDSNEAEAEIKKTMIRQATEVALLVDHSKFDRKAFVQLADFSHINYIITDKSPGAEWI AFCKDNNIQLVW >gi|296918667|gb|GG773033.1| GENE 250 266324 - 267682 703 452 aa, chain + ## HITS:1 COG:ydjE KEGG:ns NR:ns ## COG: ydjE COG0477 # Protein_GI_number: 16129723 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 452 1 452 452 787 98.0 0 MEQYDQIGARLDRLPLARFHYRIFGIISFSLLLTGFLSYSGNVVLAKLVSNGWSNNFLNA AFTSALMFGYFIGSLTGGFIGDYFGRRRAFRINLLIVGIAATGAAFVPDMYWLIFFRFLM GTGMGALIMVGYASFTEFIPATVRGKWSARLSFVGNWSPMLSAAIGVVVIAFFSWRIMFL LGGIGILLAWFLSGKYFIESPRWLAGKGQIAGAESQLREVEQQIEREKRIRLPPLTLNQS NSKVKVIKGTFWLLFKGEMLRRTLVAITVLIAMNISLYTITVWIPTIFVNSGIDVDKSIL MTAVIMIGAPVGIFIAALIIDHFPRRLFGSALLIIIAVLGYIYSIQTTEWAILIYGLVMI FFLYMYVCFASAVYIPELWPTHLRLRGSGFVNAVGRIVAVFTPYGVAALLTHYGSITVFM VLGVMLVLCALVLSIFGIETRKVSLEEISEVN >gi|296918667|gb|GG773033.1| GENE 251 267775 - 268416 664 213 aa, chain - ## HITS:1 COG:ECs2475 KEGG:ns NR:ns ## COG: ECs2475 COG1335 # Protein_GI_number: 15831729 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 212 7 218 219 432 97.0 1e-121 MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRGEAVIASQDWHPANHGS FASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLKQKAIAAVFHKGENPLVDSY SAFFDNGRRQKTALDDWLRAHVINELIVMGLATDYCVKFTVLDALQLGYKVNVITDGCRG VNIQPQDSAHAFMEMSAAGATLYTLADWEETQE >gi|296918667|gb|GG773033.1| GENE 252 268427 - 269443 880 338 aa, chain - ## HITS:1 COG:ECs2474 KEGG:ns NR:ns ## COG: ECs2474 COG0252 # Protein_GI_number: 15831728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 677 99.0 0 MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDS SDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIP LAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNRTTKAHADGFDAFASPNLPPL LEAGIHIRRLNTPPAPHGEGALIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILR SYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADM TVEATLTKLHYLLSQELDTETIRKAMSQNLRGELTPDD >gi|296918667|gb|GG773033.1| GENE 253 269627 - 271483 1847 618 aa, chain - ## HITS:1 COG:sppA KEGG:ns NR:ns ## COG: sppA COG0616 # Protein_GI_number: 16129720 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli K12 # 1 618 1 618 618 1202 99.0 0 MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQVSGGDSKETASRGALL LDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDL KNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLH GFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAARETDSRWIGELWQNYL NTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKTLTKEFG WSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDAR LDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANY IVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQQMMQLS IENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELA KVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLASVASTVKSESDKLAA FNDPQNRYAFCLTCANVR >gi|296918667|gb|GG773033.1| GENE 254 271644 - 272195 612 183 aa, chain + ## HITS:1 COG:ECs2471 KEGG:ns NR:ns ## COG: ECs2471 COG0778 # Protein_GI_number: 15831725 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 362 99.0 1e-100 MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGRERFSA VLEQGAIAAGSDNKAIDKARNAPFRAPLIITVVAKCEENHKVPRWEQEMSAGCAVMAMQM AAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYLGTPQLKASTSINVPDPTPFV TYF >gi|296918667|gb|GG773033.1| GENE 255 272312 - 273355 1158 347 aa, chain + ## HITS:1 COG:selD KEGG:ns NR:ns ## COG: selD COG0709 # Protein_GI_number: 16129718 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Escherichia coli K12 # 1 347 1 347 347 671 98.0 0 MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNG TSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIARE VTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKPL GIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEM CQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQ TSGGLLLAVTPEAEDEVKATAAEFGIELSAIGELVSARGGRAMVEIR >gi|296918667|gb|GG773033.1| GENE 256 273360 - 275315 1679 651 aa, chain + ## HITS:1 COG:topB KEGG:ns NR:ns ## COG: topB COG0550 # Protein_GI_number: 16129717 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Escherichia coli K12 # 1 650 1 652 653 1292 97.0 0 MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYAR WNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQ LAPEKRQQIQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAY TILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIW QPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIE AAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLP QPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVF RKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEV VERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGF LTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLY QLIDQAKRTSVRQFRGIMAPGGREGKKKDSPRKRAPKKSPPSEEAGNGVIT >gi|296918667|gb|GG773033.1| GENE 257 275392 - 276735 1378 447 aa, chain - ## HITS:1 COG:ECs2467 KEGG:ns NR:ns ## COG: ECs2467 COG0334 # Protein_GI_number: 15831721 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 893 99.0 0 MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPKYRQMSLLERLVEPERV IQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALT TLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMA GMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGS GNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKASRDGRVADYAKEF GLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQ QAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARLHHIMLDIHHACVEHGGEG EQTNYVQGANIAGFVKVADAMLSQGVI >gi|296918667|gb|GG773033.1| GENE 258 276971 - 277243 68 90 aa, chain + ## HITS:1 COG:no KEGG:APECO1_830 NR:ns ## KEGG: APECO1_830 # Name: ynjH # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 90 1 90 90 178 100.0 5e-44 MSRALIAVVLAFPLITLANPHYHPDVEVNVPPEVFSSGGQSAQPCTQCCVYQDQNYSEGA VIKAEGILLQCQRDDKTLSTNPLVWRRVKP >gi|296918667|gb|GG773033.1| GENE 259 277209 - 277616 301 135 aa, chain - ## HITS:1 COG:ECs2465 KEGG:ns NR:ns ## COG: ECs2465 COG0494 # Protein_GI_number: 15831719 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 135 1 135 135 239 97.0 7e-64 MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELNEELGIE ATVGDYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALVWCSPEEALRYPLAPADIP LLEAFMASRAARPAD >gi|296918667|gb|GG773033.1| GENE 260 277739 - 278323 462 194 aa, chain + ## HITS:1 COG:ynjF KEGG:ns NR:ns ## COG: ynjF COG0558 # Protein_GI_number: 16129712 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Escherichia coli K12 # 1 194 15 208 208 317 94.0 8e-87 MLYQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALIVILLNRLLDGLDGALA RRRGLTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAAL AAKHQIDNPGYAHKSFYYLGGLTEGSETILLFVLSCLFPGCFPWFAWVFGALCWMTTFTR VWSGYLTLKSLQRQ >gi|296918667|gb|GG773033.1| GENE 261 278332 - 279639 1451 435 aa, chain - ## HITS:1 COG:ECs2463 KEGG:ns NR:ns ## COG: ECs2463 COG2897 # Protein_GI_number: 15831717 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 # 1 435 6 440 440 841 98.0 0 MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNG PSGHEPAALNLSASWLDKMSTEQLNEWIKQHNLKADAPVALYGNDKDVDAVKTRLQKAGF THISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKF YLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVA QIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQAR GLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTM RSADDITAMWKAWNIKPDQQVSFYCGTGWRASETFMYARAMGWNNVSVYDGGWYEWSSDP KNPVATGERGPDSSK >gi|296918667|gb|GG773033.1| GENE 262 279706 - 280359 194 217 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 194 4 201 223 79 31 3e-13 MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLFSWMIGALAGQFSCTGE LWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALPATLKGNARRNAVNDALER SGLDGAFHQDPATLSGGQRARVALLRALLAQPKALLLDEPFSRLDVALRDNFRHWVFSEI RAMAIPVVQVTHDLQDVPPDSPVLDMAQWSENYNKLR >gi|296918667|gb|GG773033.1| GENE 263 280359 - 281894 1481 511 aa, chain - ## HITS:1 COG:ynjC KEGG:ns NR:ns ## COG: ynjC COG4135 # Protein_GI_number: 16129709 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli K12 # 16 511 1 496 496 681 96.0 0 MATPLQYALIFLLWAMMAVIYAPLIPAALTLISPALSLTHWQALFADPQLPQALLATLVS TTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVAFATSALLIFADGGLLYDY FPYFTPPMDKLGIGLGLTLAVKESAFLLWILAAVLSEKRLLQQLIVLDSLGYSRWQCLNW LLLPSVASALAMAMLAIVAWSLSVVDVAIILGPGNPPTLAVISWQWLTQGDADQQTKGAL ASLLLMLLLAAYVLLGYLLWRGWRRTIPRVDGVRKPATPLLPGNTLASFLPLTGVLCVVL LAILADQSTINSEALINSLTMGLVAAFISLLLLLLWLEWGPQRRQLWLWLPILLPALPLV AGQYTLALWLNLDGSWTAVVWGHLLWVMPWMLFILQPAWQRIDSRLILIAQTLGWSRAKI FFYVKCPLMLRPALIAFAVGFSVSIAQYMPTLWLGAGRFPTLTTEAVALSSGGSNGILAA QALWQLLLPLIIFALTALVAKWVGYVRQGLR >gi|296918667|gb|GG773033.1| GENE 264 281867 - 283033 830 388 aa, chain - ## HITS:1 COG:ynjB KEGG:ns NR:ns ## COG: ynjB COG4134 # Protein_GI_number: 16129708 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli K12 # 1 388 2 389 389 693 98.0 0 MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTH YAINLKIVRLADAADAVKRIQTEVAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAET LPNWRYVDTQLPVREDFSVPTEGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANP GTVTYPRPPDFTGTAFLEQLLIMLTPDPTALKEAPDDATFARVTAPLWQYLDALHPYLWR EGKDFPPSPARMDALLKANTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHF VTIPANANASAAAKVVANFLLSPDAQLRKADPAVWGDPSVLDPQKLPDGQRESLQSRMPQ DLPPVLAEPHAGWVNALEQEWLHRYSTH >gi|296918667|gb|GG773033.1| GENE 265 283043 - 283591 408 182 aa, chain - ## HITS:1 COG:ECs2459 KEGG:ns NR:ns ## COG: ECs2459 COG2128 # Protein_GI_number: 15831713 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 349 97.0 2e-96 MGLPPLSKIPFILRPQTWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDP VVRSLVSARIAQMCLCEFCVDITSMKVAERTGSTDKLLAVADWRQSPLFSDEERLALEYA EAASVTPPTVDDALRARLATHFDAQALTELTALIGLQNLSARFNSAMDIPAQGLCRIPEK RS >gi|296918667|gb|GG773033.1| GENE 266 283591 - 284298 652 235 aa, chain - ## HITS:1 COG:ECs2458 KEGG:ns NR:ns ## COG: ECs2458 COG0398 # Protein_GI_number: 15831712 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 403 99.0 1e-112 MMKMQSRKIWYYRITLIILLFAVLLAWALLPGVHEFINRSVAAFAAVDQQGIERFIQSYG ALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVM GREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGLTSIRFRSFFIA TGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNA >gi|296918667|gb|GG773033.1| GENE 267 284312 - 284989 846 225 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_1439 NR:ns ## KEGG: EcSMS35_1439 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 225 1 225 225 438 98.0 1e-122 MLQHYSVSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTML VQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKET THVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTPATVTFKITE >gi|296918667|gb|GG773033.1| GENE 268 284994 - 285704 618 236 aa, chain - ## HITS:1 COG:ECs2456 KEGG:ns NR:ns ## COG: ECs2456 COG0398 # Protein_GI_number: 15831710 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 236 17 252 252 402 97.0 1e-112 MNAERKFLLACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFIIATL FLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSHTFQA IEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLPGIVIYTVMA SDLANEGITLRFILQLCLAGLALFILVQLAKLYARHKHVDLSASRRSPLSHPKNEG >gi|296918667|gb|GG773033.1| GENE 269 285871 - 286677 769 268 aa, chain - ## HITS:1 COG:ECs2455 KEGG:ns NR:ns ## COG: ECs2455 COG0708 # Protein_GI_number: 15831709 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Escherichia coli O157:H7 # 1 268 1 268 268 562 99.0 1e-160 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC CVETGIDYEIRSMEKPSDHAPVWATFRR >gi|296918667|gb|GG773033.1| GENE 270 287123 - 288343 1302 406 aa, chain + ## HITS:1 COG:ECs2454 KEGG:ns NR:ns ## COG: ECs2454 COG4992 # Protein_GI_number: 15831708 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 808 97.0 0 MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPEL REALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFA HDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYNDINSASALI DDATCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYACMH YGVTPDLLTTAKALGGGFPVGALLATEECASVMTVGTHGTTYGGNPLASAVAGKVLDLIN TPEMLNGVKQRHDWFVERLNSINHHYSLFSEVRGLGLLIGCVLNADYAGQAKQISQEAVK AGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSRGSS >gi|296918667|gb|GG773033.1| GENE 271 288340 - 289374 1000 344 aa, chain + ## HITS:1 COG:ECs2453 KEGG:ns NR:ns ## COG: ECs2453 COG3138 # Protein_GI_number: 15831707 # Func_class: E Amino acid transport and metabolism # Function: Arginine/ornithine N-succinyltransferase beta subunit # Organism: Escherichia coli O157:H7 # 1 344 1 344 344 721 98.0 0 MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSVRIERAIKTWQGELPKSEQGYVF VLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSS ELCTLFLDPKWRKEGNGYLLSKSRFMFMAAFRDKFNDKVVAEMRGVIDEHGYSPFWQSLG KRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTYFLSQEAQDVIGQVHPQTAPARAVLE KEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVEVAEGQPAQGDFPACLVANENYHHF RVVLVRTDPATERLILTAAQLDVLKCHAGDRVRLVRLCAEEKTA >gi|296918667|gb|GG773033.1| GENE 272 289371 - 290849 1347 492 aa, chain + ## HITS:1 COG:astD KEGG:ns NR:ns ## COG: astD COG1012 # Protein_GI_number: 16129700 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 492 1 492 492 935 96.0 0 MTLWINGDWVTGQGALRVKRNPVSGEVLWQGNDADAAQVGQACRAARAAFPRWARLSFGD RQVRVERFAGLLESNKAELTAIIARETGKPRWEAATEVTAMINKIAISIKAYHVRTGEQR SEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTIIFKPSELTPWSGDAV MRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKIL ALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQRCTCARRLFLKSGTQGDAFLARLVA VSQRLTPGTWDDEPQPFIGGLISEQAAQQVVTAWQELEAMGGRTLLAPRLLQAGTSLLTP GIIEMTGVTGLPDEEVFGPLLRVWRYDNFDEAIRMANNTRFGLSCGLVSPEREKFDQLLL EARAGIVNWNKPLTGAASTAPFGGIGASGNHRPSAWYAADYCAWPMASLESDSLTLPATL NPGLDFSDEMVR >gi|296918667|gb|GG773033.1| GENE 273 290846 - 292189 1131 447 aa, chain + ## HITS:1 COG:astB KEGG:ns NR:ns ## COG: astB COG3724 # Protein_GI_number: 16129699 # Func_class: E Amino acid transport and metabolism # Function: Succinylarginine dihydrolase # Organism: Escherichia coli K12 # 1 447 1 447 447 874 97.0 0 MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAAKQGLLKMKKLADAGFPQA VIPPHERPFIPVLRQLGFRGSDEQVLEKVARQAPHWLSSVSSASPMWVANAATIAPSADT LDGKVHLTVANLNNKFHRSLEAPVTESLLKAIFNDEEKFSVHSALPQVALLGDEGAANHN RLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREASEAVARLNQVNPQQVIFAQQNPD VIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLANLRARVNGFMAIEVPATQVFVSDAV STYLFNSQLLSRDDGSMVLVLPQECREHAGVWRYLNELLAADNPISELKVFDLRESMANG GGPACLRLRVVLTEEERRAVNPAVMMNDTLFNALNDWVDRYYRDRLTAADLADPQLLREG REALDTLTQLLDLGSVYPFQREGGGNG >gi|296918667|gb|GG773033.1| GENE 274 292182 - 293150 790 322 aa, chain + ## HITS:1 COG:ydjS KEGG:ns NR:ns ## COG: ydjS COG2988 # Protein_GI_number: 16129698 # Func_class: E Amino acid transport and metabolism # Function: Succinylglutamate desuccinylase # Organism: Escherichia coli K12 # 1 322 1 322 322 661 99.0 0 MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQGVLVISAGIHGNETAPV EMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDMNRMFGGRWQLFAESGETC RARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGVLPQRDIPWDEKFLTWLGAAG LEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFGQNDLRQFAVTASAIAALLSGES VGIVRTPPLRYRVVSQITRHSPSFEMHMANDTLNFMPFEKGTLLAQDGEERFTVTHDVEY VLFPNPLVALGLRAGLMLEKIS >gi|296918667|gb|GG773033.1| GENE 275 293480 - 293965 622 161 aa, chain + ## HITS:1 COG:spy KEGG:ns NR:ns ## COG: spy COG3678 # Protein_GI_number: 16129697 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli K12 # 1 161 1 161 161 227 98.0 7e-60 MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHEDMMFKDLNLTDA QKQQIREIIKGQRDQMKRPPLEERRAMHDIIASDTFDKAKAEAQIAKMEEQRKANMLAHM ETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE >gi|296918667|gb|GG773033.1| GENE 276 294163 - 294738 282 191 aa, chain + ## HITS:1 COG:ECs2448 KEGG:ns NR:ns ## COG: ECs2448 COG3758 # Protein_GI_number: 15831702 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 191 22 212 212 394 97.0 1e-110 MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASITSIAANGEFSLFPGMERIVT LLEGGEMFLESADRFNHTLKPLQPFSFAADLVVKAKLTAGQMSMDFNIMTRLDVCKAKVR IAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFDGRHTLRLLQPQGKLLFSEIN WLAGHSPDQVQ >gi|296918667|gb|GG773033.1| GENE 277 294698 - 295585 596 295 aa, chain - ## HITS:1 COG:ydjQ KEGG:ns NR:ns ## COG: ydjQ COG0322 # Protein_GI_number: 16129695 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Escherichia coli K12 # 1 295 1 295 295 585 97.0 1e-167 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSINIRSR VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA CFRSALKRCAGACCGKESHDDHALRLRQSLERLRVVCWPWKGAVALKEQHPEMTQYHIIQ NWLWLGAVNSLKEATTLIRAPAGFDHDGYKILCKPLLSGNYEITELDPVNDQQAS >gi|296918667|gb|GG773033.1| GENE 278 295815 - 296642 966 275 aa, chain - ## HITS:1 COG:ECs2446 KEGG:ns NR:ns ## COG: ECs2446 COG0171 # Protein_GI_number: 15831700 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Escherichia coli O157:H7 # 1 275 1 275 275 547 98.0 1e-156 MTLQQQIIKVLGAKPQINAEEEIRRSIDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLC QMAINELRQETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVNIKGAVLASEQ ALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTD INPLYRLNKRQGKQLLAALGCPEHLYKKAPTADLEDDRPSLPDEVALGVTYDNIDDYLEG KNVPEQVARTIENWYLKTEHKRRPPITVFDDFWKK >gi|296918667|gb|GG773033.1| GENE 279 296844 - 297182 407 112 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1791 NR:ns ## KEGG: ECS88_1791 # Name: osmE # Def: DNA-binding transcriptional activator OsmE # Organism: E.coli_S88 # Pathway: not_defined # 1 112 1 112 112 207 100.0 7e-53 MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRAQVAQIAGKPSSEVS MIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCAEYDTDPQATK >gi|296918667|gb|GG773033.1| GENE 280 297481 - 297801 425 106 aa, chain + ## HITS:1 COG:ECs2444 KEGG:ns NR:ns ## COG: ECs2444 COG1440 # Protein_GI_number: 15831698 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Escherichia coli O157:H7 # 1 93 1 93 106 174 100.0 3e-44 MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQI AYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKKAAAN >gi|296918667|gb|GG773033.1| GENE 281 297886 - 299244 1562 452 aa, chain + ## HITS:1 COG:celB KEGG:ns NR:ns ## COG: celB COG1455 # Protein_GI_number: 16129691 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Escherichia coli K12 # 1 452 1 452 452 789 99.0 0 MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSF FYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLL SVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVHRNWVIKLPDSVP TSVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQIIMDTISTPLASLGSVVGWAYVIF VPLLWFFGIHGALALTALDNGIMTPWALENIATYQQYGSVEAALAAGKTFHIWAKPMLDS FIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIP FVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGIAT LIYLPFVVVANKAQNAIDKEESEEDIANALKF >gi|296918667|gb|GG773033.1| GENE 282 299295 - 299645 547 116 aa, chain + ## HITS:1 COG:ECs2442 KEGG:ns NR:ns ## COG: ECs2442 COG1447 # Protein_GI_number: 15831696 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 116 1 116 116 172 99.0 1e-43 MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKTMMDQSRMA LNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARELITELIELHEKLKA >gi|296918667|gb|GG773033.1| GENE 283 299656 - 300495 756 279 aa, chain + ## HITS:1 COG:ECs2441 KEGG:ns NR:ns ## COG: ECs2441 COG2207 # Protein_GI_number: 15831695 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 279 2 280 280 517 99.0 1e-146 MQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEING KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT NNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDIPQWLKSTVEKM HDKEQFSESALENMVTLSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV TDIAFGAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ >gi|296918667|gb|GG773033.1| GENE 284 300599 - 301951 1612 450 aa, chain + ## HITS:1 COG:ECs2440 KEGG:ns NR:ns ## COG: ECs2440 COG1486 # Protein_GI_number: 15831694 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 944 99.0 0 MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKAKLDIIFDLCQRMID NAGVPMKLYKTLDRREALKDADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLF KGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYRHTGFKRFIGVCNIPIGMKM FIRDVLMLKDSDDLSIDLFGLNHMVFIKDVLVNGKSRFAELLDGVASGQLKASGVKNIFD LPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNP ELNVKPKELEQRGGAYYSDAACEVINAIYNDKQAEHYVNIPHHGHIDNIPADWAVEMTCT LGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALSGEFNDVLLALNLSPLVHSDRD AELLAREMILAHEKWLPNFADCIAELKKAH >gi|296918667|gb|GG773033.1| GENE 285 301964 - 302722 644 252 aa, chain + ## HITS:1 COG:ECs2439 KEGG:ns NR:ns ## COG: ECs2439 COG3394 # Protein_GI_number: 15831693 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 497 96.0 1e-140 MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGM HFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEGALPLEEITQELASQYLRFIELFGRKPT HLDSHHHVHMFPQIFPIVAKFAAEEGIALRIDRQPLSNDGDLPANLRSSQGFSSAFYGEE ISETLFLQVLDDSSHRGERSLEVMCHPAFVDNTIRQSAYCFPRLTELDVLTSASLKYALA ERGYLLGSYHDV >gi|296918667|gb|GG773033.1| GENE 286 302768 - 305029 2003 753 aa, chain - ## HITS:1 COG:katE KEGG:ns NR:ns ## COG: katE COG0753 # Protein_GI_number: 16129686 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Escherichia coli K12 # 1 753 1 753 753 1510 99.0 0 MSQHNEKNPHQHQSPLHDSSEAKPGMDSLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDT RNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHE RIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDTNKITPVFVRFSTVQGGAGSADTVR DIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFW DYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKA SLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLI PEELVPVQRVGKMVLNRNPDNFFAENEQVAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQI SRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRG GFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIR ERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYSIPDGDVKG RVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSL TVDAVIVPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKVADQGEEGIAE ADSADGSFMDELLTLMTAHRVWSRIPKIDKIPA >gi|296918667|gb|GG773033.1| GENE 287 305212 - 305475 172 87 aa, chain + ## HITS:1 COG:no KEGG:APECO1_800 NR:ns ## KEGG: APECO1_800 # Name: cedA # Def: cell division modulator # Organism: E.coli_APEC # Pathway: not_defined # 1 87 1 87 87 151 100.0 7e-36 MRLVKPVMKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESF LRSPAFTVPESAQRWANQIRQENEVEE >gi|296918667|gb|GG773033.1| GENE 288 305522 - 306913 1747 463 aa, chain - ## HITS:1 COG:ydjN KEGG:ns NR:ns ## COG: ydjN COG1823 # Protein_GI_number: 16129683 # Func_class: R General function prediction only # Function: Predicted Na+/dicarboxylate symporter # Organism: Escherichia coli K12 # 1 462 1 462 463 748 99.0 0 MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKD SVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAA LVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSDLSVPQLVLSFIPKNPFADLT GANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGLLLGINGVSPLKYFRKVWPVL TFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAP TVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLLALLISVEPL IDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR >gi|296918667|gb|GG773033.1| GENE 289 307046 - 307636 373 196 aa, chain - ## HITS:1 COG:ECs2434 KEGG:ns NR:ns ## COG: ECs2434 COG1988 # Protein_GI_number: 15831688 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 1 196 5 200 200 379 100.0 1e-105 MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKW ISKPIARAFGHRGFTHSLLAVFALLATFYLKVPESWFIPADALQGMVLGYLSHILADMLT PAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVWMPHSLPENSAVRWSSQMIN TLQIQFHRLIKHQVEY >gi|296918667|gb|GG773033.1| GENE 290 307800 - 308468 736 222 aa, chain - ## HITS:1 COG:ECs2433 KEGG:ns NR:ns ## COG: ECs2433 COG0637 # Protein_GI_number: 15831687 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 409 99.0 1e-114 MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDL WYARQPWNGPSRQEVVEQVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLH MLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIA SKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDLLG >gi|296918667|gb|GG773033.1| GENE 291 308615 - 309151 486 178 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1778 NR:ns ## KEGG: ECS88_1778 # Name: yniB # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 178 1 178 178 338 100.0 8e-92 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQEGINAVMLDFTHVMVDM MQANTPFLNVFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPLICIAAGYVFFSLLGFI >gi|296918667|gb|GG773033.1| GENE 292 309192 - 310052 788 286 aa, chain - ## HITS:1 COG:yniA KEGG:ns NR:ns ## COG: yniA COG3001 # Protein_GI_number: 16129679 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Escherichia coli K12 # 1 286 1 286 286 572 99.0 1e-163 MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGRDFFVKCDERELLPGFTAEAD QLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQP QFGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRL ASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQ SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA >gi|296918667|gb|GG773033.1| GENE 293 310158 - 310448 280 96 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_2013 NR:ns ## KEGG: ECUMN_2013 # Name: ydiZ # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 96 1 96 96 160 100.0 2e-38 MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDDGNIHELGTNTFGLISTQ SEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK >gi|296918667|gb|GG773033.1| GENE 294 310549 - 311478 1022 309 aa, chain - ## HITS:1 COG:pfkB KEGG:ns NR:ns ## COG: pfkB COG1105 # Protein_GI_number: 16129677 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Escherichia coli K12 # 1 309 1 309 309 570 99.0 1e-163 MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFP AGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQ LEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIIDSSGEALSAALAIGN IELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQ VVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDDT QKIYAYLSR >gi|296918667|gb|GG773033.1| GENE 295 311764 - 312522 527 252 aa, chain + ## HITS:1 COG:ECs2428 KEGG:ns NR:ns ## COG: ECs2428 COG3137 # Protein_GI_number: 15831682 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative salt-induced outer membrane protein # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 461 100.0 1e-130 MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT DRRTTLSLGYSM >gi|296918667|gb|GG773033.1| GENE 296 312575 - 312682 90 35 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1773 NR:ns ## KEGG: ECS88_1773 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 35 38 72 72 68 100.0 6e-11 MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG >gi|296918667|gb|GG773033.1| GENE 297 313449 - 313883 134 144 aa, chain - ## HITS:1 COG:b1721m KEGG:ns NR:ns ## COG: b1721m COG0666 # Protein_GI_number: 16132225 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli K12 # 1 142 1 142 632 247 89.0 6e-66 MSKNDIIIRTHYESPLRMHIDSDILTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEF TASCRKISHNCYTTALFIISFTTSPIHAENTLITLHYKKEIISLFLETTPIKANHLRSIL DYIEQEQLTAEKRNHCMKLSKKNS >gi|296918667|gb|GG773033.1| GENE 298 314466 - 316334 1948 622 aa, chain + ## HITS:1 COG:thrS KEGG:ns NR:ns ## COG: thrS COG0441 # Protein_GI_number: 16129675 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 622 21 642 642 1311 100.0 0 MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLG HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMK TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTT SSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFT QDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEAD LAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGE DNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQ KLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMD VNEVIEKLQQEIRSRSLKQLEE >gi|296918667|gb|GG773033.1| GENE 299 316401 - 316880 665 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 158 2 159 159 260 81 7e-68 QEVRLTGLEGEQLGIVSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSS KEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIG MEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ >gi|296918667|gb|GG773033.1| GENE 300 316962 - 317174 358 70 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 [Shigella flexneri 5 str. 8401] # 1 70 1 70 70 142 98 3e-32 MEVIKMPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDL GLVIACLPYA >gi|296918667|gb|GG773033.1| GENE 301 317227 - 317583 578 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15802128|ref|NP_288150.1| 50S ribosomal protein L20 [Escherichia coli O157:H7 EDL933] # 1 118 1 118 118 227 100 9e-58 MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQL WIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA >gi|296918667|gb|GG773033.1| GENE 302 318034 - 319017 1292 327 aa, chain + ## HITS:1 COG:ECs2421 KEGG:ns NR:ns ## COG: ECs2421 COG0016 # Protein_GI_number: 15831675 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 668 100.0 0 MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTTLRELPPEERPAAGAVI NEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFF GELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDATRLLRTQTSGVQIRTMKA QQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEEDLQ IRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGME RLTMLRYGVTDLRSFFENDLRFLKQFK >gi|296918667|gb|GG773033.1| GENE 303 319032 - 321419 2806 795 aa, chain + ## HITS:1 COG:ECs2420_2 KEGG:ns NR:ns ## COG: ECs2420_2 COG0072 # Protein_GI_number: 15831674 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Escherichia coli O157:H7 # 140 795 1 656 656 1288 99.0 0 MKFSELWLRGWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGDFKIKAAKLRGEPSEGMLC SFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVA VSNQLPLVEPEIVPVGATIDDTLPIAVEAPDACPRYLGRVVKGINVKAPTPLWMKEKLRR CGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKLDAD TLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRY ERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLIGHH IADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDEPVQ ASLIMGTHREADLSLKRVKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALLLPSPISVE MSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNR YEEHWNLAKETVDFYDLKGDLESVLDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIG FVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPA ADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAK CVEALKERFQASLRD >gi|296918667|gb|GG773033.1| GENE 304 321424 - 321723 318 99 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG] # 3 92 4 93 96 127 66 1e-27 MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQR PGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE >gi|296918667|gb|GG773033.1| GENE 305 321841 - 322821 914 326 aa, chain + ## HITS:1 COG:btuC KEGG:ns NR:ns ## COG: btuC COG4139 # Protein_GI_number: 16129667 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, permease component # Organism: Escherichia coli K12 # 1 326 1 326 326 473 100.0 1e-133 MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWFTPRGELFVWQIRLPRT LAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLC AIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAIYFSTSVDLRQLMYWMM GGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGEISARQLGLPLWFWRNVLVAATG WMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADIVARLALAA AELPIGVVTATLGAPVFIWLLLKAGR >gi|296918667|gb|GG773033.1| GENE 306 322883 - 323434 570 183 aa, chain + ## HITS:1 COG:ECs2417 KEGG:ns NR:ns ## COG: ECs2417 COG0386 # Protein_GI_number: 15831671 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 374 98.0 1e-104 MQDSILTTVVKDIDGKVTTLEKYAGNVLLIVNVASKCGLTPQYEQLENIQKAWADRGFVV LGFPCNQFLEQEPGSDEEIKNYCTTTWGVTFPMFSKIEVNGEGRHPLYQKLIAAAPTAVA PEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGLVIQRFSPDMTPEDPIVMESIKLA LAK >gi|296918667|gb|GG773033.1| GENE 307 323446 - 324183 708 245 aa, chain + ## HITS:1 COG:ECs2416 KEGG:ns NR:ns ## COG: ECs2416 COG4138 # Protein_GI_number: 15831670 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 245 5 249 249 452 99.0 1e-127 MQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLE AWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKTRTELLNDVAGALALDDKLGRST NQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQGL AIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPANLAQAYGMNFRRLDIEGHRM LISTI >gi|296918667|gb|GG773033.1| GENE 308 324261 - 324725 273 154 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 40 154 65 174 175 109 45 2e-22 MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGV DCSGFVVVTMRDRFDLQLPRETKQQAAIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYD TNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI >gi|296918667|gb|GG773033.1| GENE 309 325004 - 325717 158 237 aa, chain + ## HITS:1 COG:ECs2414 KEGG:ns NR:ns ## COG: ECs2414 COG2200 # Protein_GI_number: 15831668 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 469 96.0 1e-132 MKIFLENLYHSDCYFLPIRDNQQDLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQL FSEQLELLKSCQHFFIQHKLFAWLNLTPHVATLLLDRDNFAGELLKYPFIELLINENYPH FNEGKDNRDLLSLSQMYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEP FIRAIQAQISPCCNCIIAGGIDTPEILAQIIPFDFHALQGCLWPAVPINQITTLVQR >gi|296918667|gb|GG773033.1| GENE 310 325780 - 327216 1132 478 aa, chain + ## HITS:1 COG:ECs2413 KEGG:ns NR:ns ## COG: ECs2413 COG0397 # Protein_GI_number: 15831667 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 478 1 478 478 948 97.0 0 MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNGAGVWGGENL LPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDG RAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETVESGAMLMRVAPSHLRFGH FEHFYYRREPEKVRQLADFAIRHYWSHLDDEEDKYRLWFTDVVARTASLIAQWQTVGFAH GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQT LSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDY TRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQQDEITDSERQQLMQSVNPA LVLRNWLAQRAIEAAEKDDMTELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS >gi|296918667|gb|GG773033.1| GENE 311 327220 - 327411 163 63 aa, chain - ## HITS:1 COG:ECs2412 KEGG:ns NR:ns ## COG: ECs2412 COG4256 # Protein_GI_number: 15831666 # Func_class: P Inorganic ion transport and metabolism # Function: Hemin uptake protein # Organism: Escherichia coli O157:H7 # 1 63 1 63 63 103 96.0 7e-23 MRYTDSRKLTPETDASHKTASPQPIRRITSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLL LTK >gi|296918667|gb|GG773033.1| GENE 312 327543 - 328589 919 348 aa, chain - ## HITS:1 COG:ECs2411 KEGG:ns NR:ns ## COG: ECs2411 COG0722 # Protein_GI_number: 15831665 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 721 99.0 0 MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEKILNGEDKRLLVIIGPC SIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNH GLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGAIGARTTESQIHREMASALSC PVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMTIYQTSGNPYGHIIMRGGKKPNY HADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRRQLEVCEDICQQIRNGSTAIAGIMA ESFLREGTQKIVGGQPLTYGQSITDPCLGWEDTERLVEKLASAVDTRF >gi|296918667|gb|GG773033.1| GENE 313 328751 - 329503 793 250 aa, chain - ## HITS:1 COG:ECs2410 KEGG:ns NR:ns ## COG: ECs2410 COG1806 # Protein_GI_number: 15831664 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 250 28 277 277 498 100.0 1e-141 MSQFPVTISSITLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEG FCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRN LDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGL TIDPERLAAIREERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKIL DIMGLSRRMY >gi|296918667|gb|GG773033.1| GENE 314 329917 - 332295 2711 792 aa, chain + ## HITS:1 COG:ppsA KEGG:ns NR:ns ## COG: ppsA COG0574 # Protein_GI_number: 16129658 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Escherichia coli K12 # 1 792 1 792 792 1604 99.0 0 MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVSVPNGFATTADAFNQFL DQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQPELENAIREAYGQLSADDE NASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAVKHVFASLFNDRAISYRVHQG YDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQVVFITSAWGLGEMVVQGAVNPDE FYVHKQTLAANRPAIVRRTMGSKKIRMVYAPTQEHGKQVKIEDVPQEQRDIFSLTNEEVQ ELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPETVRSRGQVMERYTLHSQGKIIA EGRAIGHRIGAGPVKVIHDISEMNRIEPGDVLVTDMTDPDWEPIMKKASAIVTNRGGRTC HAAIIARELGIPAVVGCGDATERMKDGENVTVSCAEGDTGYVYAELLEFSVKSSSVETMP DLPLKVMMNVGNPDRAFDFACLPNEGVGLARLEFIINRMIGVHPRALLEFDDQEPQLQNE IREMMKGFDSPREFYVGRLTEGIATLGAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDE ENPMLGFRGAGRYVSDSFRDCFALECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEE LARQGLKRGENGLKIIMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVS ELFDERNDAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTV VQTWLSLAELKK >gi|296918667|gb|GG773033.1| GENE 315 332352 - 333998 1068 548 aa, chain - ## HITS:1 COG:ECs2408 KEGG:ns NR:ns ## COG: ECs2408 COG0318 # Protein_GI_number: 15831662 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 1 548 19 566 566 1110 98.0 0 MKVTLTFNEQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVVDNHGATYTYSALDHAA SCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKTGAVSVPLLPSWREAELVWVLNK CQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQILADNTPLT TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGH ATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNLLEKQPA DLSALRFFLCGGTTIPKKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLPRFMHTDGY AAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCR MDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYV VLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTVSGKIQKFLLRKDIMRRLT QDVCEEIE >gi|296918667|gb|GG773033.1| GENE 316 334055 - 334348 291 97 aa, chain - ## HITS:1 COG:ECs2407 KEGG:ns NR:ns ## COG: ECs2407 COG2440 # Protein_GI_number: 15831661 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 205 97.0 2e-53 MSQNATVNVDIKLGVNKFHVDEGHPHIILAANPDINEFRKLIKACPAGLYKQDDAGNIHF DSAGCLECGTCRVLCGNTILEQWQYPAGTFGIEFRYG >gi|296918667|gb|GG773033.1| GENE 317 334345 - 335634 1218 429 aa, chain - ## HITS:1 COG:ECs2406 KEGG:ns NR:ns ## COG: ECs2406 COG0644 # Protein_GI_number: 15831660 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli O157:H7 # 1 429 1 429 429 823 98.0 0 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP GFAASAPIERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVSASDPHH YAVGVKEVIGLTPEQINDRFNVTGEEGAAWLFAGSPSDGLMGGGFLYTNKDSVSLGLVCG LSDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDGVMIV GDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRD MQHFRKIPALMENPRLFSQYPRMVADIMNDMFTIDGKPNQPVRKMIMGHAKKIGLINLLK DGIKGATAL >gi|296918667|gb|GG773033.1| GENE 318 335689 - 336627 1039 312 aa, chain - ## HITS:1 COG:ECs2405 KEGG:ns NR:ns ## COG: ECs2405 COG2025 # Protein_GI_number: 15831659 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 610 98.0 1e-174 MSQLNSVWVFSDNPEHYAELFGGAQQWGQQVYAIVQNTEQAQAVMPYGPKCIYVLEQNDA LQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQLNAALVNDATAVDIVDGHI CAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTRDISHQCPTETVPYVAPRHEILCRE RRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERE RYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIY KVVPALISQLNR >gi|296918667|gb|GG773033.1| GENE 319 336647 - 337411 769 254 aa, chain - ## HITS:1 COG:ECs2404 KEGG:ns NR:ns ## COG: ECs2404 COG2086 # Protein_GI_number: 15831658 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 467 98.0 1e-132 MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEVASQLATDDDEIAALTVG GSLLQNSKVRKDVLSRGPHSLYMVQDAQLEHALPLDTAKALATAVEKIGFDLLIFGEGSG DLYAQQVGLLVGELLQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDI NVPRIPSMKAILGAGKKPVNQWQASDIGWSQSAPLAELTGIRVPPQTERKHIILDNDSPE AIAELAEHLKKALN >gi|296918667|gb|GG773033.1| GENE 320 337727 - 338638 611 303 aa, chain + ## HITS:1 COG:ydiP KEGG:ns NR:ns ## COG: ydiP COG2207 # Protein_GI_number: 16129652 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 303 1 303 303 619 99.0 1e-177 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGVEENQLLQPHSCPVIAA GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS LAG >gi|296918667|gb|GG773033.1| GENE 321 338681 - 339832 1414 383 aa, chain - ## HITS:1 COG:ECs2402 KEGG:ns NR:ns ## COG: ECs2402 COG1960 # Protein_GI_number: 15831656 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 1 383 19 401 401 801 100.0 0 MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEF GGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSAEQLRKTAESTLETGDPAY ALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKA FTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEM ERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLK VAWQADQHQSLRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERI GGGTDEIMIYVAGRQILKDYQNK >gi|296918667|gb|GG773033.1| GENE 322 339846 - 341441 1614 531 aa, chain - ## HITS:1 COG:ydiF KEGG:ns NR:ns ## COG: ydiF COG4670 # Protein_GI_number: 16129650 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Escherichia coli K12 # 1 531 1 531 531 1065 99.0 0 MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEATTLITALADKYKQTQTP RNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRISDLAEQNKIIAYNYPQGV LTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKEELIKLVEFDNKEYLYYKAIA PDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNNGGIVMMQVQKMVKKATLHPKSV RIPGYLVDIVVVDPDQTQLYGGAPVNRFISGDFTLDDSTKLSLPLNQRKLVARRALFEMR KGAVGNVGVGIADGIGLVAREEGCADDFILTVETGPIGGITSQGIAFGANVNTRAILDMT SQFDFYHGGGLDVCYLSFAEVDQHGNVGVHKFNGKIMGTGGFIDISATSKKIVFCGTLTA GSLKTEITDGKLNIVQEGRVKKFIRELPEITFSGKIALKRGLDVRYITERAVFTLKEDGL HLIEIAPGVDLQKDILDKMDFTPVISPELKLMDERLFIDAAMGFVLPEAAH >gi|296918667|gb|GG773033.1| GENE 323 341587 - 342345 925 252 aa, chain - ## HITS:1 COG:aroD KEGG:ns NR:ns ## COG: aroD COG0710 # Protein_GI_number: 16129649 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Escherichia coli K12 # 1 252 1 252 252 447 99.0 1e-126 MKTVTVKDLVIGTGAPKIIVSLMAKDIASVKSEALAYREADFDILEWRVDHYADLSNVES VIAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTG DDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSD VLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVN DLRTVLTILHQA >gi|296918667|gb|GG773033.1| GENE 324 342376 - 343242 823 288 aa, chain - ## HITS:1 COG:ydiB KEGG:ns NR:ns ## COG: ydiB COG0169 # Protein_GI_number: 16129648 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Escherichia coli K12 # 1 288 1 288 288 579 99.0 1e-165 MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPAAIEGLKALK MRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGF DIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVT VTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTK LLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA >gi|296918667|gb|GG773033.1| GENE 325 343254 - 344519 867 421 aa, chain - ## HITS:1 COG:ydiN KEGG:ns NR:ns ## COG: ydiN COG0477 # Protein_GI_number: 16129647 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 421 3 423 423 715 98.0 0 MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMTSLAEKFSTDNAGIAYLISGIGLG RLISILFFGVISDKFGRRAVILMAVIMYLLFFFGIPACPNLTLAYCLAVCVGIANSALDT GGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYMLLNNIWYGYGLIIPGILFVLI TLMLLKSKFPSQLVDASVANELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYA MAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMVRPIWANVFNSALATITAAIIYLY PSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITG YLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGEHKFSTRLNTIKHR G >gi|296918667|gb|GG773033.1| GENE 326 344746 - 345960 808 404 aa, chain - ## HITS:1 COG:ECs2397 KEGG:ns NR:ns ## COG: ECs2397 COG0477 # Protein_GI_number: 15831651 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 404 1 404 404 710 97.0 0 MKNPYYPTALGLYFNYLVHGMGVILMSLNMASLETLWQTNAAGVSIVISSLGIGRLSVLL FAGLLSDRFGRRPFIMLGMCCYMAFFFGILHTNNIIIAYVFGFLAGMANSFLDAGTYPSL MEAFPRSPGTANILIKAFVSSGQFLLPLIISLLVWAELWFGWSFMIAAGIMFINALFLYR CTFPPHPGRHLPVIKKTTSSTEHRCSIIDLASYSLYGYISMATFYLVSQWLAQYGQFVAG MSYTMSIKLLSIYTVGSLLCVFITAPLIRNTVRPTTLLMLYTFISFIALLTVCLHPTFYV VIIFAFVIGFTSAGGVVQIGLTLMAERFPYAKGKATGIYYSAGSIATFTIPLITAHLSQR SIADIMWFDTAIAAIGFILALFIGLRSRKETRHHTLKENIAPGG >gi|296918667|gb|GG773033.1| GENE 327 346060 - 346416 130 118 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C1881 NR:ns ## KEGG: UTI89_C1881 # Name: ydiL # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 118 10 127 127 243 100.0 1e-63 MNAYELQALRHIFAMTIDECATWIAQTGNSESWRQWENGKCAIPDCVVEQLLAMRQQRKK HLHAIIEKINNRIGNNTMRFFPDLTAFQQVYPDGNFIDWKIYQSVAAELYAHDLERLC >gi|296918667|gb|GG773033.1| GENE 328 346845 - 347957 1335 370 aa, chain - ## HITS:1 COG:ECs2395 KEGG:ns NR:ns ## COG: ECs2395 COG0628 # Protein_GI_number: 15831649 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 370 1 370 370 584 99.0 1e-167 MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMF GRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIG AKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSALLYWR GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTLDNVIRPMLI RMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEEILE ELGEIEKPNK >gi|296918667|gb|GG773033.1| GENE 329 348171 - 351227 2610 1018 aa, chain + ## HITS:1 COG:ydiJ_1 KEGG:ns NR:ns ## COG: ydiJ_1 COG0277 # Protein_GI_number: 16129643 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli K12 # 1 542 1 542 542 1122 99.0 0 MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTDNSIYQLLPDAVVFPRS TADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVDMSRHMNRIIEINPEEGWV RVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGV RAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVYQRCRQQRQLIIDNFPKLNRFLT GYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARLDITRLPKVRRLVNVKYDSFDSALR NAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDVPDKEMLGLNIVEFAGDDEAL IDERVNALCVRLDELIASQQAGVIGWQVCRELAGVERIYAMRKKAVGLLGNAKGAAKPIP FAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKQ ISDDVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEELFAELRKVKAAFDPYNRLNPGKIC PPEGLDAPMMKVDAVKRGTFDRQIPIAVRQQWRGAMECNGNGLCFNFDARSPMCPSMKIT QNRIHSPKGRATLVREWLRLLADRGVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEY DFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYA PLMARAPKTFNFFINQPLVRKLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLEAL NAEQKARTVLVVQDPFTSYYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRF AKTAKKTADFLNRMAKLGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASAL DSQPVATVSGESWYFFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHE AKNHKNSLRIYELSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK >gi|296918667|gb|GG773033.1| GENE 330 351224 - 351634 321 136 aa, chain + ## HITS:1 COG:ydiI KEGG:ns NR:ns ## COG: ydiI COG2050 # Protein_GI_number: 16129642 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 136 1 136 136 273 99.0 6e-74 MIWKRKITLEALNAMGEGNMVGLLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVV LAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGVCKPLHLGSRHQVWQIEIFD EKGRLCCSSRLTTAIL >gi|296918667|gb|GG773033.1| GENE 331 351734 - 351922 290 62 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E1886 NR:ns ## KEGG: SbBS512_E1886 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 62 28 89 89 109 100.0 3e-23 MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLG VH >gi|296918667|gb|GG773033.1| GENE 332 352471 - 352839 439 122 aa, chain + ## HITS:1 COG:ydiC KEGG:ns NR:ns ## COG: ydiC COG0316 # Protein_GI_number: 16129640 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 122 1 122 122 252 99.0 1e-67 MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMIGVRLGVKQTGCAGFGYVLDSV SEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQIFKFHNPKAQNECGCGESF GV >gi|296918667|gb|GG773033.1| GENE 333 352809 - 354335 1421 508 aa, chain + ## HITS:1 COG:ynhE KEGG:ns NR:ns ## COG: ynhE COG0719 # Protein_GI_number: 16129639 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli K12 # 1 508 1 508 508 1052 99.0 0 MWLWRKLWGIGGTMSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAIS AKRNEPEWMLEFRLNAYHAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDNCASEP GAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFC SFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRI NAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNW FPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVA LTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDS MLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFC KDVFSELPLEFAVEAQKLLAISLEHSVG >gi|296918667|gb|GG773033.1| GENE 334 354345 - 355091 778 248 aa, chain + ## HITS:1 COG:ECs2389 KEGG:ns NR:ns ## COG: ECs2389 COG0396 # Protein_GI_number: 15831643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 483 99.0 1e-136 MLSIKDLHVSVEDKAILRGLSLDVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTSGTV EFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDF QDLMEEKIAPLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDA LKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQG YGWLTEQQ >gi|296918667|gb|GG773033.1| GENE 335 355066 - 356337 1054 423 aa, chain + ## HITS:1 COG:ECs2388 KEGG:ns NR:ns ## COG: ECs2388 COG0719 # Protein_GI_number: 15831642 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli O157:H7 # 1 423 1 423 423 798 98.0 0 MAGLPNSSNALQQWHHLFEAEGAKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLDGLTNS QFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSDATEGSGYEVSINDDRQGLPDA IQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHLDLAEG AEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLADDAT AFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQL HKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSH GATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQRLPG GAR >gi|296918667|gb|GG773033.1| GENE 336 356334 - 357554 1367 406 aa, chain + ## HITS:1 COG:csdB KEGG:ns NR:ns ## COG: csdB COG0520 # Protein_GI_number: 16129636 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Escherichia coli K12 # 1 406 1 406 406 826 99.0 0 MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHT LSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQ MEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTE NPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLN NIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRT GHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLLG >gi|296918667|gb|GG773033.1| GENE 337 357567 - 357983 487 138 aa, chain + ## HITS:1 COG:ynhA KEGG:ns NR:ns ## COG: ynhA COG2166 # Protein_GI_number: 16129635 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Escherichia coli K12 # 1 126 1 126 138 249 98.0 1e-66 MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDKSPQNSIQGCQSQVWIVMR QNAQGIIELHGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRS QGLEAMIRAIRAKAAALS >gi|296918667|gb|GG773033.1| GENE 338 358132 - 359136 697 334 aa, chain + ## HITS:1 COG:ECs2385 KEGG:ns NR:ns ## COG: ECs2385 COG1376 # Protein_GI_number: 15831639 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 604 99.0 1e-173 MKRASLLTLTLIGAFSAIQAAWAVDYPLPSTGSRLVGQNQTYTVQEGDKNLQAIARRFDT AAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVY PIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPV AVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ >gi|296918667|gb|GG773033.1| GENE 339 359213 - 359449 365 78 aa, chain - ## HITS:1 COG:ECs2384 KEGG:ns NR:ns ## COG: ECs2384 COG4238 # Protein_GI_number: 15831638 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein lipoprotein # Organism: Escherichia coli O157:H7 # 1 78 1 78 78 105 100.0 2e-23 MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKD DAARANQRLDNMATKYRK >gi|296918667|gb|GG773033.1| GENE 340 359863 - 361275 1564 470 aa, chain - ## HITS:1 COG:ECs2383 KEGG:ns NR:ns ## COG: ECs2383 COG0469 # Protein_GI_number: 15831637 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Escherichia coli O157:H7 # 1 470 1 470 470 884 100.0 0 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKT AAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVG NTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIF GCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVAN AILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCR GAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLV KEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL >gi|296918667|gb|GG773033.1| GENE 341 361832 - 362041 257 69 aa, chain + ## HITS:1 COG:no KEGG:ECO111_2144 NR:ns ## KEGG: ECO111_2144 # Name: ydhZ # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 69 1 69 69 109 100.0 4e-23 MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAM ETVINALVK >gi|296918667|gb|GG773033.1| GENE 342 362497 - 363123 376 208 aa, chain + ## HITS:1 COG:ECs2381 KEGG:ns NR:ns ## COG: ECs2381 COG0437 # Protein_GI_number: 15831635 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 364 98.0 1e-101 MNPVDRPLLNIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGV LVTHRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTA DTCRQCKEPQCMNVCPIGAITWQQEEGCITVDHKRCIGCSACTTACPWMMATVNTESKKS SKCVLCGECANACPTGALKIIEWKDITV >gi|296918667|gb|GG773033.1| GENE 343 363144 - 365246 1794 700 aa, chain + ## HITS:1 COG:ydhV KEGG:ns NR:ns ## COG: ydhV COG2414 # Protein_GI_number: 16129629 # Func_class: C Energy production and conversion # Function: Aldehyde:ferredoxin oxidoreductase # Organism: Escherichia coli K12 # 1 700 1 700 700 1493 99.0 0 MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVF ATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSP VWLNIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSR NHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTP QSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKY TVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGR VIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNF IKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQ VGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIK YAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEDMTQEKLDL AAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLT MFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA >gi|296918667|gb|GG773033.1| GENE 344 365259 - 365897 459 212 aa, chain + ## HITS:1 COG:no KEGG:c2066 NR:ns ## KEGG: c2066 # Name: ydhW # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 212 4 215 215 383 97.0 1e-105 MNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAV FLSPPYSVAEEELSVLLENIKQNGDHADIACLTGSQDDYYYSTQAMSENYAAMSLQVVEQ DICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESS TAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP >gi|296918667|gb|GG773033.1| GENE 345 365961 - 366629 196 222 aa, chain + ## HITS:1 COG:ydhX KEGG:ns NR:ns ## COG: ydhX COG0437 # Protein_GI_number: 16129627 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 222 18 239 239 454 99.0 1e-128 MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTN HVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTAASWRDEQGIVRVE KSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGR EDSPEIQAWLQENKYYQYQLPGAGKPHLYRRFGQHLIKKENV >gi|296918667|gb|GG773033.1| GENE 346 366626 - 367411 610 261 aa, chain + ## HITS:1 COG:ECs2377 KEGG:ns NR:ns ## COG: ECs2377 COG4117 # Protein_GI_number: 15831631 # Func_class: C Energy production and conversion # Function: Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) # Organism: Escherichia coli O157:H7 # 1 261 1 261 261 470 97.0 1e-132 MNPSQHAEQFQSQLANYVPLFTPQFWPVWLIIAGLLLVGMWLVLGLHALLRARGVKKSAT DHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLA CWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQ QVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYL CTTGRTPHETFKSMVDGYHRH >gi|296918667|gb|GG773033.1| GENE 347 367415 - 368227 247 270 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1717 NR:ns ## KEGG: ECS88_1717 # Name: ydhT # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 270 1 270 270 519 100.0 1e-146 MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLA DENFAHQEVSSMQKLATDPGERLFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGY SVRIGSVGFNSHIGSSGARARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVAS NGDLVQIASFGANARIANCGDNVHIIASGENSTVVSTGVVDSIILGPGGCAALAYHDGER VRFAVAIEGENNIRAGVRYRLNEQHQFVEC >gi|296918667|gb|GG773033.1| GENE 348 368239 - 369843 862 534 aa, chain - ## HITS:1 COG:ydhS KEGG:ns NR:ns ## COG: ydhS COG4529 # Protein_GI_number: 16129624 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 534 1 534 534 1076 98.0 0 MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDDENSKLMLANIASI EIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQ KFAVAVYESCQVTDLQITNAGVMIATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSP WSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVIFHRDNASEKLNITL MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWS QRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKRENHTVPWRYVILRLHEAV QEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYEMEI NESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD >gi|296918667|gb|GG773033.1| GENE 349 369969 - 370274 351 101 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1715 NR:ns ## KEGG: ECS88_1715 # Name: ydhR # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 101 1 101 101 189 100.0 3e-47 MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFINEK SALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA >gi|296918667|gb|GG773033.1| GENE 350 370384 - 370572 92 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRPSGLEPPTPTMSRWCSNQLSYGRRMVRSIGLEPTTPTMSRWCSNQLSYERNVVGDNGD EY >gi|296918667|gb|GG773033.1| GENE 351 370848 - 372104 913 418 aa, chain + ## HITS:1 COG:ECs2373 KEGG:ns NR:ns ## COG: ECs2373 COG3468 # Protein_GI_number: 15831627 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 1 418 1 418 418 693 98.0 0 MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGARAENTVVTGAGWLKVATGGIA KCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLE NGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVF MLAGKANDTLLAGGTMNNLGGEDSDTIVENGAIYRLGTDGLQLYSSGKTQNLSVNVGGRA EVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADL QQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITGAATHVQLKVKRLRGEG AICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA >gi|296918667|gb|GG773033.1| GENE 352 372145 - 373518 1532 457 aa, chain - ## HITS:1 COG:ECs2372 KEGG:ns NR:ns ## COG: ECs2372 COG0534 # Protein_GI_number: 15831626 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 795 99.0 0 MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILF GHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMQNID PALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIY GHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQ LGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVG YRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLL AAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAG FWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRAAR >gi|296918667|gb|GG773033.1| GENE 353 373733 - 374374 765 213 aa, chain + ## HITS:1 COG:ribC KEGG:ns NR:ns ## COG: ribC COG0307 # Protein_GI_number: 16129620 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Escherichia coli K12 # 1 213 1 213 213 426 100.0 1e-119 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVS FDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQ IWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARV NIEIDPQTQAVVDTVERVLAARENAMNQPGTEA >gi|296918667|gb|GG773033.1| GENE 354 374414 - 375562 992 382 aa, chain - ## HITS:1 COG:cfa KEGG:ns NR:ns ## COG: cfa COG2230 # Protein_GI_number: 16129619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Escherichia coli K12 # 1 382 1 382 382 812 100.0 0 MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGE SYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHY DLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGG LAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEH VGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQS SEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRA RDIQLWQVVFSRGVENGLRVAR >gi|296918667|gb|GG773033.1| GENE 355 375853 - 377064 1181 403 aa, chain - ## HITS:1 COG:ECs2369 KEGG:ns NR:ns ## COG: ECs2369 COG0477 # Protein_GI_number: 15831623 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 403 1 403 403 706 99.0 0 MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLL WGPLSDRYGRKPVLFIGLTIFALGSLGMLWVENAATLLILRFVQAVGVCAAAVIWQALVT DYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWL KPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVI GLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEIL IPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTP LLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH >gi|296918667|gb|GG773033.1| GENE 356 377177 - 378109 665 310 aa, chain + ## HITS:1 COG:ECs2368 KEGG:ns NR:ns ## COG: ECs2368 COG0583 # Protein_GI_number: 15831622 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 621 99.0 1e-178 MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTA AGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDD VELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLAL MDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMV PTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLR EPEETPATGD >gi|296918667|gb|GG773033.1| GENE 357 378106 - 379131 1015 341 aa, chain - ## HITS:1 COG:ECs2367 KEGG:ns NR:ns ## COG: ECs2367 COG1609 # Protein_GI_number: 15831621 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 697 99.0 0 MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK SIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLL VMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHRE IGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQSHRP TAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGET AFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR >gi|296918667|gb|GG773033.1| GENE 358 379430 - 379519 125 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTDLKFSLVTTIIVLGLIVAVGLTAALH >gi|296918667|gb|GG773033.1| GENE 359 379685 - 380854 1233 389 aa, chain + ## HITS:1 COG:ydhP KEGG:ns NR:ns ## COG: ydhP COG2814 # Protein_GI_number: 16129615 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 389 1 389 389 568 99.0 1e-162 MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLM TLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAAS VVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSL PKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHVTPVFVT AMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLVIPFLARNEFGAAISMVVW GAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPV MGAIVAGLALLLVFMSVRKQPETVCVANS >gi|296918667|gb|GG773033.1| GENE 360 381000 - 381581 462 193 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 193 1 199 201 182 44 3e-44 MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS EGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFG SGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWA LVNWEFVAKNLAA >gi|296918667|gb|GG773033.1| GENE 361 381709 - 382524 206 271 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 128 264 47 174 175 84 37 1e-14 MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTA KKAASKSTTKSKTASSVKKSSITASKNAKTRSKHTVNKTASANFTEKCTKRKGYKSHCVK VKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGGSSPRTGFDCSGLVYYAYKDL VKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRT GREIQITSLSEDYWQRHYVGARRVMTPKTLR >gi|296918667|gb|GG773033.1| GENE 362 382859 - 383206 495 115 aa, chain + ## HITS:1 COG:ECs2363 KEGG:ns NR:ns ## COG: ECs2363 COG0278 # Protein_GI_number: 15831617 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Escherichia coli O157:H7 # 1 115 1 115 115 225 100.0 1e-59 MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQNPDIRA ELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKETAAKYKSEEPDAE >gi|296918667|gb|GG773033.1| GENE 363 383578 - 384225 704 215 aa, chain - ## HITS:1 COG:ECs2361 KEGG:ns NR:ns ## COG: ECs2361 COG0847 # Protein_GI_number: 15831615 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 441 100.0 1e-124 MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHF HVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKVVRKGIKASGCNRAIMVAH NANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALGQTVLSKACQTAGMDFDSTQA HSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV >gi|296918667|gb|GG773033.1| GENE 364 384328 - 384735 218 135 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 2 127 4 126 126 88 38 5e-16 MRLLHTMLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN WGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYK IELIEEKDAGRGLGN >gi|296918667|gb|GG773033.1| GENE 365 384816 - 385913 1131 365 aa, chain - ## HITS:1 COG:nemA KEGG:ns NR:ns ## COG: nemA COG1902 # Protein_GI_number: 16129608 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli K12 # 1 365 1 365 365 693 98.0 0 MSSEKLYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRASAGLIISEAT QISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQLWHTGRISHASLQPGGQAP VAPSALSAGTRTSLRDENGQAIRVETSMPRALELGEIPGIVNDFRQAIANAREAGFDLVE LHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLGLEVVNAGIEEWGADRIGIRISPIGT FQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDWAGGEPYTDAFREKVRARFHGPIIG AGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAESFYGGGAEGYT DYPTL >gi|296918667|gb|GG773033.1| GENE 366 385950 - 386549 524 199 aa, chain - ## HITS:1 COG:ydhM KEGG:ns NR:ns ## COG: ydhM COG1309 # Protein_GI_number: 16129607 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 199 1 199 199 391 100.0 1e-109 MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGSFYHYFRSKEAFGVAML ERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGTISGCLTVKLSAEVCDLSE DMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQAQVLYALWLGANLQAKISRSF EPLENALAHVKNIIATPAV >gi|296918667|gb|GG773033.1| GENE 367 386652 - 386891 74 79 aa, chain + ## HITS:1 COG:ECs2358 KEGG:ns NR:ns ## COG: ECs2358 COG3313 # Protein_GI_number: 15831611 # Func_class: R General function prediction only # Function: Predicted Fe-S protein # Organism: Escherichia coli O157:H7 # 1 79 47 125 125 147 94.0 4e-36 MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSDGEKQEVLRLCRQRLMR KLRVNKSAPSDEPEQPSLF >gi|296918667|gb|GG773033.1| GENE 368 386940 - 387836 990 298 aa, chain + ## HITS:1 COG:ydhF KEGG:ns NR:ns ## COG: ydhF COG4989 # Protein_GI_number: 16129605 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Escherichia coli K12 # 1 298 1 298 298 608 99.0 1e-174 MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQC EAAFGEALKLAPHLRERMEIVSKCGIATTACEENVIGHYITDRDHIIKSAEQSLINLATD HLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQ VEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQPLRDELAVVAEELNAG SIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYDVP >gi|296918667|gb|GG773033.1| GENE 369 387902 - 388438 674 178 aa, chain + ## HITS:1 COG:ECs2355 KEGG:ns NR:ns ## COG: ECs2355 COG2032 # Protein_GI_number: 15831609 # Func_class: P Inorganic ion transport and metabolism # Function: Cu/Zn superoxide dismutase # Organism: Escherichia coli O157:H7 # 6 178 1 173 173 300 98.0 1e-81 MNGGPMKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQLIGSVTITETDKGLEFSPD LKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPA LVVNNDGKATDAVIAPRLKSLDEVKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK >gi|296918667|gb|GG773033.1| GENE 370 388439 - 390451 1277 670 aa, chain - ## HITS:1 COG:ydhK KEGG:ns NR:ns ## COG: ydhK COG1289 # Protein_GI_number: 16129603 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 670 1 670 670 1213 99.0 0 MNASSWSLRNLPWFRATLAQWRYALRNTIAMCLALTVAYYLNLDEPYWAMTSAAVVSFPT VGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSAWLGFCTWACAHFTNNVAY AFQLAGYTAAIIAFPMVNITEASQLWDIAQARVCEVIVGILCGGMMMMILPSSSDATALL TALKNMHARLLEHASLLWQPETTDAIRAAHEGVIGQILTMNLLRIQAFWSHYRFRQQNAR LNALLHQQLRMTSVISSLRRMLLNWPSPPDATREILEQLLTALASSQTDVYTVARIISPL RPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRLQSGVDDRARLPRTSGLARHTDNAEAM WSGLRTFCTLMMIGAWSIASQWDAGANALTLAAISCVLYSAVAAPFKSLSLLMRTLVLLS LFSFVVKFGLMVQISDLWQFLLFLFPLLATMQLLKLQMPKFAALWGQLIVFMGSFIAVTN PPVYDFADFLNDNLAKIVGVALAWLAFAILRPGSDARKSRRHIRALRRDFVDQLSRHPTL SESEFESLTYHHVSQLSNSQDALARRWLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVRD NCISLLRGVMSERGVQQKSLAATLEELQRICDSLARHHQPAARELAAIVWRLYCSLSQLE QAPPQGTLAS >gi|296918667|gb|GG773033.1| GENE 371 390451 - 391308 620 285 aa, chain - ## HITS:1 COG:ydhJ KEGG:ns NR:ns ## COG: ydhJ COG1566 # Protein_GI_number: 16129602 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 285 15 299 299 548 98.0 1e-156 MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIIELNI KDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSGLAKANNEANRRRHLSQNFISAEE LDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLF ALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRAIYDQSVESDSS LIPDVKPNVPWVRLAQRVPVRFTLDKVPGDVTLVSGTTCSIAVGQ >gi|296918667|gb|GG773033.1| GENE 372 391311 - 391547 98 78 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1691 NR:ns ## KEGG: ECS88_1691 # Name: ydhI # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 78 1 78 78 105 100.0 5e-22 MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVIHRLLRGWIYAGDIWHPLLMD LSLFAICVCLALAILIAW >gi|296918667|gb|GG773033.1| GENE 373 391742 - 392182 331 146 aa, chain + ## HITS:1 COG:ECs2351 KEGG:ns NR:ns ## COG: ECs2351 COG1846 # Protein_GI_number: 15831605 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 146 1 146 146 239 98.0 1e-63 MKLESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGI EQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLICEMEAVINKTRAEILHGI SAEELEQLIKLIAKLEHNIIELQAKG >gi|296918667|gb|GG773033.1| GENE 374 392251 - 392718 585 155 aa, chain - ## HITS:1 COG:slyB KEGG:ns NR:ns ## COG: slyB COG3133 # Protein_GI_number: 16129599 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein # Organism: Escherichia coli K12 # 1 155 1 155 155 207 97.0 5e-54 MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGTIVNVRQVQIQGGDDSN VIGAIGGAVLGGFLGNTIGGGTGRSLATAAGAVAGGVAGQGVQSAMNKTQGVELEIRKDD GNTIMVVQKQGNTHFSPGQRVVLASNGSQVTVSPR >gi|296918667|gb|GG773033.1| GENE 375 392992 - 394101 885 369 aa, chain + ## HITS:1 COG:ydhH KEGG:ns NR:ns ## COG: ydhH COG2377 # Protein_GI_number: 16129598 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Escherichia coli K12 # 1 369 1 369 369 710 99.0 0 MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSLKQAVLDICQGQQLTLS QFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVWHEPTGVAPHTLQIGDNNQ IVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPTERRMVLNIGGIANLSLLIPG QPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGKVILPLLQNMLSDPYFSQPAPKS TGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAVTISEQVLLSGGCERLMVCGGGGRN PLLMARLAALLPGTEVTTTDAVGISGDDMEALAFAWLAWRTLAGLPGNLPSVTGASQETV LGAIFPANP >gi|296918667|gb|GG773033.1| GENE 376 394205 - 394528 292 107 aa, chain + ## HITS:1 COG:STM1447 KEGG:ns NR:ns ## COG: STM1447 COG3895 # Protein_GI_number: 16764795 # Func_class: R General function prediction only # Function: Predicted periplasmic protein # Organism: Salmonella typhimurium LT2 # 1 107 3 109 109 191 85.0 3e-49 MKKLLLICLPVLLTGCSSFNQLVERMQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLL HLKQGISASGARYTDGIYVFWSKGEEATVYKRDRIVLSNCQLQNPQR >gi|296918667|gb|GG773033.1| GENE 377 394587 - 395243 660 218 aa, chain + ## HITS:1 COG:pdxH KEGG:ns NR:ns ## COG: pdxH COG0259 # Protein_GI_number: 16129596 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Escherichia coli K12 # 1 218 1 218 218 429 99.0 1e-120 MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACEAKLADPTAMVVATVDE HDQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTLERQVMVIGKAER LSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGG FRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP >gi|296918667|gb|GG773033.1| GENE 378 395372 - 396646 830 424 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 4 421 7 414 418 324 41 5e-87 MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKR FQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENS AIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQG YDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTE GGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQ YVLAEQVTRLVHGEDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLM QALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGCFTLLRRGKKNYCL ICWK >gi|296918667|gb|GG773033.1| GENE 379 396744 - 397604 885 286 aa, chain + ## HITS:1 COG:ECs2345 KEGG:ns NR:ns ## COG: ECs2345 COG2240 # Protein_GI_number: 15831599 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Escherichia coli O157:H7 # 1 286 2 287 287 569 99.0 1e-162 MKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLT EIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKG CIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHPVNNVEEAVLAARELIAQGPQIVLV KHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGATLQ EALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIANPEHYFSATKL >gi|296918667|gb|GG773033.1| GENE 380 397648 - 398253 598 201 aa, chain - ## HITS:1 COG:ECs2344 KEGG:ns NR:ns ## COG: ECs2344 COG0625 # Protein_GI_number: 15831598 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 384 99.0 1e-107 MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDNYFAVNPKGQVPALLLDDG TLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIATELHKGFTPLFRPDTPEE YKSTVRAQLEKKLQYVNEALKDEHWICGQRFTIADAYLFTVLRWAYAVKLNLEGLEHIAA FMQRMAERPEVQDALSAEGLK >gi|296918667|gb|GG773033.1| GENE 381 398358 - 399860 1649 500 aa, chain - ## HITS:1 COG:ECs2343 KEGG:ns NR:ns ## COG: ECs2343 COG3104 # Protein_GI_number: 15831597 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli O157:H7 # 1 487 1 487 500 878 99.0 0 MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSI TLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMA AIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKYGWS VAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINYRNLLLTIIGVVALIAIATWLLH NQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLN FFAIRNVEHTILGLAVEPEQYQALNPFWIIIGSPILAAIYNKMGDTLPMPTKFAIGMVMC SGAFLILPLGAKFASDAGIVSVSWLVASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIM GSWFLTTAGANLIGGYVAGMMAVPDNVTDPLMSLEVYGRVFLQIGVATAVIAVLMLFTAP KLHRMTQDDAADKAAKAAVA >gi|296918667|gb|GG773033.1| GENE 382 400471 - 401106 618 211 aa, chain - ## HITS:1 COG:nth KEGG:ns NR:ns ## COG: nth COG0177 # Protein_GI_number: 16129591 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Escherichia coli K12 # 1 211 1 211 211 426 100.0 1e-119 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI >gi|296918667|gb|GG773033.1| GENE 383 401106 - 401801 756 231 aa, chain - ## HITS:1 COG:ECs2341 KEGG:ns NR:ns ## COG: ECs2341 COG4660 # Protein_GI_number: 15831595 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 392 98.0 1e-109 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFRTD SPFLLAMLPPGAFIGLGLMLAGKYLIDEKMKKRRTEAVAERALPNGETGNV >gi|296918667|gb|GG773033.1| GENE 384 401805 - 402425 549 206 aa, chain - ## HITS:1 COG:ydgP KEGG:ns NR:ns ## COG: ydgP COG4659 # Protein_GI_number: 16129589 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Escherichia coli K12 # 1 206 1 206 206 389 99.0 1e-108 MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKALFDQVLPAERYNNALA QSCYLVTAPELGKGEHRVYIAKQDDNPVAAVLEATAPDGYSGAIQLLVGADFNGTVLGTR VTEHHETPGLGDKIELRLSDWITHFAGKKISGADDANWAVKKDGGDFDQFTGATITPRAV VNAVKRAGLYAQTLPAQLSQLPACGE >gi|296918667|gb|GG773033.1| GENE 385 402429 - 403487 881 352 aa, chain - ## HITS:1 COG:ECs2339 KEGG:ns NR:ns ## COG: ECs2339 COG4658 # Protein_GI_number: 15831593 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Escherichia coli O157:H7 # 1 352 1 352 352 629 98.0 1e-180 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTTSGGDMNTLRLGI DGISQATPLDTFKTSVRAGHSVEEIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI RWHVPLSFLVTLALCATLGWLFSPDTLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR LIFGALAGLLVWMIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG >gi|296918667|gb|GG773033.1| GENE 386 403488 - 405422 1618 644 aa, chain - ## HITS:1 COG:ydgN KEGG:ns NR:ns ## COG: ydgN COG4656 # Protein_GI_number: 16129587 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Escherichia coli K12 # 1 643 1 643 740 1078 97.0 0 MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVS VGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADGEDCWIP RDGWADYRSRSREELIERIHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYIT ADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLADSHDISLRVIP TKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPITERVVTLT GEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMGFTLPWLDVPVVKITNCL LAPSANELGEPQEEQSCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADCIECG ACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLERHKS AAVQPAAKDKDAIAAALARVKEKQAQATQPIVIKAGERPDNSAIIAAREARKAQARAKQA ELQQTNDAATVADPRKTAVEAAIARAKARKLEQQQANAEPEEQIDPRKAAVEAAIARAKA RKLEQQQANAEPEEQIDPRKAAVAAAIARVQAKKAAQQKVVNED >gi|296918667|gb|GG773033.1| GENE 387 405415 - 405993 403 192 aa, chain - ## HITS:1 COG:ECs2337 KEGG:ns NR:ns ## COG: ECs2337 COG2878 # Protein_GI_number: 15831591 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Escherichia coli O157:H7 # 1 192 1 192 192 366 100.0 1e-101 MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPY AEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQELTPARMVAVIDENNCIGC TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNT IPVRIIPVEHHA >gi|296918667|gb|GG773033.1| GENE 388 405993 - 406574 556 193 aa, chain - ## HITS:1 COG:ECs2336 KEGG:ns NR:ns ## COG: ECs2336 COG4657 # Protein_GI_number: 15831590 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 285 99.0 5e-77 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID TWILIPLNLIYLRTMAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM SLAFMGFSGLVKL >gi|296918667|gb|GG773033.1| GENE 389 406651 - 407091 366 146 aa, chain - ## HITS:1 COG:no KEGG:SSON_1532 NR:ns ## KEGG: SSON_1532 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 146 9 154 154 204 100.0 1e-51 MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTFQTLGGQALTTQILWGV SFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAVKAFAFSPVEDGIAVRQLL FTLLATALIVPYFKRSSRVKATFVNP >gi|296918667|gb|GG773033.1| GENE 390 407177 - 407392 242 71 aa, chain - ## HITS:1 COG:no KEGG:G2583_2020 NR:ns ## KEGG: G2583_2020 # Name: cnu # Def: OriC-binding nucleoid-associated protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 71 1 71 71 133 100.0 3e-30 MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAADHRRAELVSGGRLFDLG QVPKSVWHYVQ >gi|296918667|gb|GG773033.1| GENE 391 407665 - 407865 93 66 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1915 NR:ns ## KEGG: ECUMN_1915 # Name: blr # Def: beta-lactam resistance membrane protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 66 1 66 66 107 100.0 1e-22 MLELLLLSNIYPLKLMDQSTEMWAVMNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQS TTVQHK >gi|296918667|gb|GG773033.1| GENE 392 408033 - 409073 994 346 aa, chain + ## HITS:1 COG:ECs2332 KEGG:ns NR:ns ## COG: ECs2332 COG0673 # Protein_GI_number: 15831586 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli O157:H7 # 1 346 14 359 359 681 99.0 0 MSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVKADWPTVTVVSEPKHLF NDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSV FHNRRWDSDFLTLKGLLAEGVLGEIAYVESHFDRFRPQVRDRWREQGGPGSGIWYDLAPH LLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGTMLAAAESARYIV HGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYP AYYAAIRDALNGDGENPVPASQAIQVMELIELGIESAKHRATLCLA >gi|296918667|gb|GG773033.1| GENE 393 409161 - 410162 1196 333 aa, chain - ## HITS:1 COG:ECs2331 KEGG:ns NR:ns ## COG: ECs2331 COG1816 # Protein_GI_number: 15831585 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Escherichia coli O157:H7 # 1 333 1 333 333 655 99.0 0 MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFL TKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPGYMAMAHQLPVAGVVEAVI DGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHRDQITALDLAGDELGFPGSLF LSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQI GIESCLTSNIQTSTVADLAAHPLKTFLEHGIRASINTDDPGVQGVDIIHEYTVAAPAAGL SREQIRQAQINGLEMAFLSAEEKRALREKVAAK >gi|296918667|gb|GG773033.1| GENE 394 410266 - 411438 925 390 aa, chain - ## HITS:1 COG:ECs2330 KEGG:ns NR:ns ## COG: ECs2330 COG1168 # Protein_GI_number: 15831584 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Escherichia coli O157:H7 # 1 389 1 389 390 815 99.0 0 MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAPCIIEALNQRLIHGVFG YSRWKNDEFLAAIAHWFSTQHYTAIDPQSVVYGPSVIYMVSELIRQWSETGEGVVIHTPA YDAFYKAIEGNQRTVMPVALEKQPDGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPAL TGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRVYLKDNLT YIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKIAIMPGYTYGEEG RGFVRLNAGCPRSKLEKGVAGLINAIRAVG >gi|296918667|gb|GG773033.1| GENE 395 411448 - 413040 1619 530 aa, chain - ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 450 1 450 450 846 99.0 0 MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPVLGNPVLQ AIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGFVGYAVMNLAVNFWLTNKG ILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWMLHERFHNIRLPDALAFFGGT RFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLH HILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTTHGFSESATRFLSQGKMPAFLG GLPGAALAMYHCARPENRHKIKGLLISGLIACVVGGTTEPLEFLFLFVAPVLYVIHALLT GLGFTVMSVLGVTIGNTDGNIIDFVVFGILHGLSTKWYMVPVVAAIWFVVYYIIFRFAIT RFNLKTPGRDSEVASSIEKAVAGAPGKSGYNVPAILEALGGADNIVSLDNCITRLRLSVK DMSLVNVQALKDNRAIGVVQLNQHNLQVVIGPQVQSVKDEMAGLMHTVQA >gi|296918667|gb|GG773033.1| GENE 396 413215 - 414243 758 342 aa, chain + ## HITS:1 COG:ECs2328 KEGG:ns NR:ns ## COG: ECs2328 COG1609 # Protein_GI_number: 15831582 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 639 99.0 0 MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAAIEELGFVRNRQASALR GGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHGGKDGEQLAQRFSLLLNQG VDGVVIAGAAGSSDDLRRIAEEKAIPVIFASRASYLDDVDTVRPDNMQAAQLLTEHLIRN GHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSDWVLECTSSQKQAAEAITALLRH NPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDRYFEQQVSLAAFTDATPTTLDDIPV TWASTPARELGTTLADRMMQKITHEETHSSNLIIPARLIAEK >gi|296918667|gb|GG773033.1| GENE 397 414355 - 415122 245 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 12 248 4 238 242 99 29 4e-19 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVNEIQQLGG QAFACRCDITSEQELSALADFAVSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVF SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK NIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVS GQILTVSGGGVQELN >gi|296918667|gb|GG773033.1| GENE 398 415354 - 415941 565 195 aa, chain + ## HITS:1 COG:ECs2326 KEGG:ns NR:ns ## COG: ECs2326 COG1309 # Protein_GI_number: 15831580 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 195 2 196 196 359 100.0 2e-99 MDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQA IILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAM LKNKHMTITEFVAQRMRDAQQKGEISPDINTAMTSRLLLDLTYGVLADIEAEDLAREASF AQGLRAMIGGILTAS >gi|296918667|gb|GG773033.1| GENE 399 416331 - 418142 1941 603 aa, chain + ## HITS:1 COG:uidA KEGG:ns NR:ns ## COG: uidA COG3250 # Protein_GI_number: 16129575 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 1 603 1 603 603 1261 99.0 0 MLRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRAIAVPGSFNDQFADADI RNYVGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEVMEHQGGYTPFEADVTP YVIAGKSVRITVCVNNELNWQTIPPGMGITDENGKKKQSYFHDFFNYAGIHRSVMLYTTP NTWVDDITVVTHVAQDCNHASVDWQVGANGDVSVELRDADQQVVATGQGTSGTLQVVNPH LWQPGEGYLYELCVTAKSQTECDIYLLRVGIRSVAVKGEQFLINHKPFYFTGFGRHEDAD LRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWADEHGIVVIDETAAVGFNLS LGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQG AREYFAPLAEATRKLDPTRPITCVNVMFCDAHTDTISDLFDVLCLNRYYGWYVQSGDLET AEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRV SAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQG GKQ >gi|296918667|gb|GG773033.1| GENE 400 418139 - 418279 85 47 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020673|ref|YP_526500.1| ribosomal protein L9 [Saccharophagus degradans 2-40] # 3 46 7 50 522 37 40 1e-22 MNQQLSWRAIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAG >gi|296918667|gb|GG773033.1| GENE 401 418315 - 419031 493 238 aa, chain + ## HITS:1 COG:ECs2323 KEGG:ns NR:ns ## COG: ECs2323 COG2211 # Protein_GI_number: 15831577 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 1 237 49 281 457 415 95.0 1e-116 MLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSK VVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSPPPPPAPPPGARGIAASLTFVCLAF LIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLKISLQTL KRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAS >gi|296918667|gb|GG773033.1| GENE 402 419074 - 419589 438 171 aa, chain + ## HITS:1 COG:ECs2323 KEGG:ns NR:ns ## COG: ECs2323 COG2211 # Protein_GI_number: 15831577 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 1 171 287 457 457 320 98.0 6e-88 MVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEAD TVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQAQTPEVIMGIR TSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLINDITS >gi|296918667|gb|GG773033.1| GENE 403 419646 - 420893 1086 415 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1661 NR:ns ## KEGG: ECS88_1661 # Name: uidC # Def: outer membrane porin protein # Organism: E.coli_S88 # Pathway: not_defined # 1 415 7 421 421 814 100.0 0 MAVICLTAASGLTSAYAAQPADDEAGLRIRLKNELRRADKPSAGTGRDIYAWVQGGLLDF NSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFALGTVKIKPSENSLLKLGR FGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTPNIDLWGMWRSRVFLWTDSTT GIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILEKSIPLD PNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRHAMNGAV VDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDVRIEGAG ILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSTLGDRLNYWDVKMSIQYDFMLK >gi|296918667|gb|GG773033.1| GENE 404 420976 - 422484 1601 502 aa, chain - ## HITS:1 COG:ECs2320 KEGG:ns NR:ns ## COG: ECs2320 COG5339 # Protein_GI_number: 15831574 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 502 1 502 502 914 99.0 0 MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNY HRGVFSSQLQLLVKPIAGKVNPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQT TLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLKPLNYEQKDEKVAFSGGEFQL NADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLE KMTISVEGKELALLEGMEISGKSDLVNDGKTVNSQLDYSLNSLKVQNQDLGSGKLTLKVG QIDGEAWHQFSQQYNAQTQALLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAP LSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVKSLDAKLTIPVDMATELMTQV AKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYANGQITLNGQKMPLE DFVGMFAMPALNVPAVPAIPQQ >gi|296918667|gb|GG773033.1| GENE 405 422585 - 423760 1359 391 aa, chain - ## HITS:1 COG:manA KEGG:ns NR:ns ## COG: manA COG1482 # Protein_GI_number: 16129571 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Escherichia coli K12 # 1 391 1 391 391 736 97.0 0 MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKSSSRVHDATGDIVSLRD VIESDKATLLGDAVAKRFGELPFLFKVLCAAQPLSIQVHPNKRNSEIGFAKENAAGIPMD AAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQPVAGAHPAIAHFLQQPDAERL SELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIRLISEFYPEDSGLFSPLLLNVVK LNPSEAMFLFAETPHAYLQGVALEVMANSDNVLRAGLTPKYIDIPELVANVKFEAKPANQ LLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETTISQQSAAILFCVEGDATLCKGSQQLQ LKPGESAFIAANESPVTVKGHGRLARVYNKL >gi|296918667|gb|GG773033.1| GENE 406 423959 - 425605 486 548 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 76 531 38 482 508 191 33 4e-47 MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAPEALTLLARQAFHDASF MLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVLPTCQDTGTAIIVGKKGQR VWTGGGDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNTGTNLPAQIDLYAVDGDEYKF LCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRTLGTAACPPYHIAFVIGGTSAET NLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKELLIEAQNLGLGAQFGGKYFAHDIRV IRLPRHGASCPVGMGVSCSADRNIKAKINRQGIWIEKLEHNPGKYIPEELRKAGEGEAVR VDLNRPMKEILAQLSQYPVSTRLSLNGTIIVGRDIAHAKLKERMDNGEGLPQYIKDHPIY YAGPAKTPEGYASGSLGPTTAGRMDSYVDQLQAQGGSMIMLAKGNRSQQVTDACKKHGGF YLGSIGGPAAVLAQGSIKSLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIQL TQCTRCVK >gi|296918667|gb|GG773033.1| GENE 407 425737 - 427140 1645 467 aa, chain + ## HITS:1 COG:ECs2317 KEGG:ns NR:ns ## COG: ECs2317 COG0114 # Protein_GI_number: 15831571 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Escherichia coli O157:H7 # 1 466 1 466 467 894 99.0 0 MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNE DLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGG VRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLSEKSRAFAD IVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTELNTHP EYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLAS GPRCGIGEISIPENEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNV FRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDK AAEIAKKAHKEGLTLKAAALALGYLSEAEFDRWVRPEQMVGSMKAGG >gi|296918667|gb|GG773033.1| GENE 408 427137 - 428066 626 309 aa, chain - ## HITS:1 COG:no KEGG:APECO1_693 NR:ns ## KEGG: APECO1_693 # Name: tus # Def: DNA replication terminus site-binding protein # Organism: E.coli_APEC # Pathway: not_defined # 1 309 5 313 313 589 100.0 1e-167 MARYDLVDRLNTTFRQMEQELAAFAAHLEQHKLLVARVFSLPEVKKEDEHNPLNRIEVKQ HLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQVDNFSQAALVSHIQHINKL KTTFEHIVTVESELPSAARFEWVHRHLPGLITLNAYRTLTVLHDPATLRFGWANKHIIKN LHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQDIAALPQNAKLKIKRPVKVQPIA RVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGELLNYDADNVQHRYKPQAQPLRLII PRLHLYVAD >gi|296918667|gb|GG773033.1| GENE 409 428142 - 429443 1183 433 aa, chain - ## HITS:1 COG:rstB KEGG:ns NR:ns ## COG: rstB COG0642 # Protein_GI_number: 16129567 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 433 1 433 433 870 99.0 0 MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMNSSLYLMRSELREIPPH DWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVALDDQYTFLQRIPRSHYVL AVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPHWQDMLKLEAAAQRFGDGHLS ERIHFDEGSSFERLGVAFNQMADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSDNL SAAESQALNRDISQLEALIEELLTYARLDRPQNELHLSEPDLPLWLSTHLADIQAVTPDK TVRIKTLAQGHYAALDMRLMERVLDNLLNNALRYCHSTVETSLLLSGNRATLIVEDDGPG IAPENREHIFEPFVRLDPSRDRSTGGCGLGLAIVHSIALAMGGTVNCDTSELGGARFSFS WPLWHNIPQFTSA >gi|296918667|gb|GG773033.1| GENE 410 429447 - 430166 604 239 aa, chain - ## HITS:1 COG:rstA KEGG:ns NR:ns ## COG: rstA COG0745 # Protein_GI_number: 16129566 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 239 4 242 242 442 97.0 1e-124 MNTIVFVEDDAEVGALIAAYLAKHDMQVTVEPRGDRAEETILRENPDLVLLDIMLPGKDG MTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNE QATVTKGIQETSLTPYKALHFGTLTIDPINRVVSLANTEISLSTADFELLWELATHAGQI MDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAWE >gi|296918667|gb|GG773033.1| GENE 411 430295 - 430630 329 111 aa, chain + ## HITS:1 COG:ECs2313 KEGG:ns NR:ns ## COG: ECs2313 COG3136 # Protein_GI_number: 15831567 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein required for alginate biosynthesis # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 162 97.0 2e-40 MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATII FSMWPIIPYFVYLAALWYFTGMMRLPAAFVGSVACWGISAWVLIICWIKLH >gi|296918667|gb|GG773033.1| GENE 412 430627 - 431349 696 240 aa, chain - ## HITS:1 COG:ECs2312 KEGG:ns NR:ns ## COG: ECs2312 COG1028 # Protein_GI_number: 15831566 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 486 98.0 1e-137 MGKTQSLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLIKAGAQCIQADFS TNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGAPLTDVLACMMQIHVNTPYLLNHAL ERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNSIA PSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSFPLDGGRHLR >gi|296918667|gb|GG773033.1| GENE 413 431386 - 432600 1213 404 aa, chain - ## HITS:1 COG:ydgI KEGG:ns NR:ns ## COG: ydgI COG0531 # Protein_GI_number: 16129563 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 404 57 460 460 702 99.0 0 MLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDT PELRLFGDGNTWQSIVGASTLLWIVHFLILRGVQTAASINLVATLAKLLPLGLFVVLAMM MFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLL AVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGA YLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYN TLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVGACIYGLWLLYASGPMHLLLSVVLY APGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIASVPATWMLVG >gi|296918667|gb|GG773033.1| GENE 414 432690 - 432800 109 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAGARR >gi|296918667|gb|GG773033.1| GENE 415 432986 - 433930 993 314 aa, chain - ## HITS:1 COG:no KEGG:ECO103_1744 NR:ns ## KEGG: ECO103_1744 # Name: ydgH # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 314 1 314 314 520 100.0 1e-146 MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTGRFNAIGEAVKAVSRRA DKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNRVINGVVELPKDQAVLIEP FDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYKKDAKKR IVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTASPSSEVGRFFETQSSKGGRYTV TLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTEVSYQVAKRAAKKGAKYYHITRQWQ ERGNNLTVSADLYK >gi|296918667|gb|GG773033.1| GENE 416 434454 - 435986 1477 510 aa, chain + ## HITS:1 COG:ECs2309 KEGG:ns NR:ns ## COG: ECs2309 COG3288 # Protein_GI_number: 15831563 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Escherichia coli O157:H7 # 1 510 1 510 510 974 99.0 0 MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEG NSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAMDSVPR ISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAA IGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME LFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEI FTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEKDGNITVDFDDVVIRGVTV IRAGEITWPAPPIQVSAQPQAAQKAAPEVKTEEKCACSPWRKYALMALAIILFGWMASVA PKEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGQGGWVSF LSFIAVLIASINIFGGFTVTQRMLKMFRKN >gi|296918667|gb|GG773033.1| GENE 417 435997 - 437385 1485 462 aa, chain + ## HITS:1 COG:ECs2308 KEGG:ns NR:ns ## COG: ECs2308 COG1282 # Protein_GI_number: 15831562 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Escherichia coli O157:H7 # 1 462 1 462 462 850 100.0 0 MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIFGPDTGNVGWI LLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVGFNSYLHHDAGMAPILVNI HLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNRHKMNLAALVVSFLLLIVFVR TDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDL LIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGDDQEVGEHREITAEETA ELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLA EAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWKAQNV IVFKRSMNTGYAGVQNPLFFKENTHMLFGDAKASVDAILKAL >gi|296918667|gb|GG773033.1| GENE 418 437422 - 438375 958 317 aa, chain - ## HITS:1 COG:ydgG KEGG:ns NR:ns ## COG: ydgG COG0628 # Protein_GI_number: 16129559 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli K12 # 1 306 1 306 344 442 99.0 1e-124 MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVP RVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQAIEPLLQRVGIDVS VDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMARPV EGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLAFALNYIPNIG SVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLSLI FWGWLFRSRNGKGAMAS >gi|296918667|gb|GG773033.1| GENE 419 438786 - 439151 461 121 aa, chain + ## HITS:1 COG:ECs2306 KEGG:ns NR:ns ## COG: ECs2306 COG2076 # Protein_GI_number: 15831560 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 121 1 121 121 182 100.0 2e-46 MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLSYIFLSFAVKKIALGVA YALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKARKPELEVNHGA V >gi|296918667|gb|GG773033.1| GENE 420 439138 - 439467 465 109 aa, chain + ## HITS:1 COG:ECs2305 KEGG:ns NR:ns ## COG: ECs2305 COG2076 # Protein_GI_number: 15831559 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 144 100.0 5e-35 MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAAVLAAFSALSQAVKGID LSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMIMVKLA >gi|296918667|gb|GG773033.1| GENE 421 439506 - 440327 584 273 aa, chain - ## HITS:1 COG:ydgD KEGG:ns NR:ns ## COG: ydgD COG3591 # Protein_GI_number: 16129556 # Func_class: E Amino acid transport and metabolism # Function: V8-like Glu-specific endopeptidase # Organism: Escherichia coli K12 # 1 273 1 273 273 518 99.0 1e-147 MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDRVPVNDTTQSPWDAVGQ LETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIEGRV DPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITPLPLFEGDKAALTAALKAAGR KVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGV QSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK >gi|296918667|gb|GG773033.1| GENE 422 440603 - 440911 329 102 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKVLALVVAAAMGLSSAAFAAETATTPAPTATTTKAAPAKTTHHKKQHKAAPAQKAQAA KKHHKNAKAEQKAPEQKAQAAKKHAKKHSHQQPAKPAAQPAA >gi|296918667|gb|GG773033.1| GENE 423 441182 - 441286 60 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNPFIWVLIILMTLDALRELAGASSILGWLLTLV >gi|296918667|gb|GG773033.1| GENE 424 441336 - 442589 947 417 aa, chain - ## HITS:1 COG:ynfM KEGG:ns NR:ns ## COG: ynfM COG0477 # Protein_GI_number: 16129554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 417 1 417 417 723 99.0 0 MSRTTTVDGAPASDTDKQSISQSNQFIKRGTPQFMRVTLALFSAGLATFALLYCVQPILP VLSQEFGLTPANSSISLSISTAMLAIGLLFTGPLSDAIGRKPVMVTALLLASICTLLSTM MTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLIS GVFTDFFNWRIALAAIGCFALASALMFWKILPESRHFRPTSLRPKTLFINFRLHWRDRGL PLLFAEGFLLMGSFVTLFNYIGYRLMLSPWHVSQAVVGLLSLAYLTGTWSSPKAGTMTTR YGRGPVMLFSTGVMLFGLLMTLFSSLWLIFAGMLLFSAGFFAAHSVASSWIGPRAKRAKG QASSLYLFSYYLGSSIAGTLGGVFWHNYGWNGVGAFIALMLVIALLVGTRLHHRLHA >gi|296918667|gb|GG773033.1| GENE 425 442696 - 443589 210 297 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 3 245 1 239 305 85 26 4e-15 MNLELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLT EAGKQFLVDSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDY PDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEHAVIVHEPLMAMIPHDHPLAN NPSVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYNLTPVITQEVGEAMTIIGLVSAGL GVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNFRIHLLNALR >gi|296918667|gb|GG773033.1| GENE 426 443724 - 444944 274 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 146 394 63 317 323 110 28 2e-22 MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLV QELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKD DSPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGE ALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSS SLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSL CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIR QQALPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG >gi|296918667|gb|GG773033.1| GENE 427 445069 - 445764 780 231 aa, chain + ## HITS:1 COG:ECs2299 KEGG:ns NR:ns ## COG: ECs2299 COG0132 # Protein_GI_number: 15831553 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Escherichia coli O157:H7 # 1 231 5 235 235 444 99.0 1e-125 MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGSKETPEGLRNKDALVLQ SVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANLTDKVDHVVVEGTGGWRSL MNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIANDGLPLIGWVANRINPGLAH YAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLAMLRSVLAVDRVTV >gi|296918667|gb|GG773033.1| GENE 428 445717 - 446898 983 393 aa, chain - ## HITS:1 COG:ECs2298 KEGG:ns NR:ns ## COG: ECs2298 COG0038 # Protein_GI_number: 15831552 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Escherichia coli O157:H7 # 1 393 21 438 438 620 93.0 1e-177 MFRRLLIATIVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALG GLAAGLLLMGWQKFTQQRPHAPTDYMEALQTDGQFDYAASLVKSLASLLVVTSGSAIGRE GAMILLAALAASCFAQRLTPRQEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVLFGTMML ASLGPVIISAVVALLVSNLINHSDALLYSGPLLLTLMNACHRGFVSLKLAPPWQLALGGL IVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASSGSGAPGGVFTPT LFIGLAIGMLYGRSLGLWLPDGEEITLLLGLTGMATLLAATTHAPIMSTLMICEMTGEYQ LLPGLLIACVIASVISRTLHRDSIYRQHTAKHS >gi|296918667|gb|GG773033.1| GENE 429 447095 - 447709 556 204 aa, chain - ## HITS:1 COG:ECs2297 KEGG:ns NR:ns ## COG: ECs2297 COG3381 # Protein_GI_number: 15831551 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli O157:H7 # 1 204 4 207 207 363 98.0 1e-101 MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTNDSWETQWPLPEASLAPLVTAF QTQSEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMK QNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGE LARLTLAQWQSQLLIPVAVKPLFR >gi|296918667|gb|GG773033.1| GENE 430 447752 - 448606 646 284 aa, chain - ## HITS:1 COG:ynfH KEGG:ns NR:ns ## COG: ynfH COG3302 # Protein_GI_number: 16129548 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Escherichia coli K12 # 1 284 1 284 284 444 96.0 1e-125 MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNNADRQHIIRGMFFLWLLMGIGFIA SVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWLVAVIGKMPQALGKLWLLV SMALGIIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLSGPILAATILRAARVTFNTTP FAIISILALIACAGLIVLQGLSLASIHSSVQQASALVPDYASLQVWRVVLLCAGLGCWLC PLIRRREPHVAGLVLGLILILGGEMIGRVLFYGLHMTVGMAIAG >gi|296918667|gb|GG773033.1| GENE 431 448608 - 449225 451 205 aa, chain - ## HITS:1 COG:ECs2295 KEGG:ns NR:ns ## COG: ECs2295 COG0437 # Protein_GI_number: 15831549 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 416 100.0 1e-116 MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFA YYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEK GHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPN IVIKPNANSRPTGDTTGYLANPEEV >gi|296918667|gb|GG773033.1| GENE 432 449236 - 451632 1560 798 aa, chain - ## HITS:1 COG:ynfF KEGG:ns NR:ns ## COG: ynfF COG0243 # Protein_GI_number: 16129546 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 798 11 808 808 1676 99.0 0 MSAEISRRSLMKTSALGSLALASSAFTLPFSQMVRAAQAPVEEKAVWSSCTVNCGSRCLL RLHVKDDTVYWVESDTTGDDVYGNHQVRACLRGRSIRRRMNHPDRLKYPMKRVGKRGEGK FERISWDEALDTISDNLRRILKDYGNEAVHVLYGTGVDGGNITNSNVPYRLMNSCGGFLS RYGSYSTAQISAAMSYMFGANDGNSPDDIANTKLVVMFGNNPAETRMSGGGVTYYVEQAR ERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALACAIAWVLITENMVDQPFLDKYCV GYDEKTLPANAPRNAHYKAYILGEGPDGIAKTPEWAAKITSIPAEKIIQLAREIGSAKPA YICQGWGPQRHSNGEQTSRAIAMLSVLTGNVGINGGNSGVREGSWDLGVEWFPMLENPVK TQISVFTWTDAIDHGTEMTAPRDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTHEVL QDDSKCEMIVGIDHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAK FERKPIYWMLSEVAKRLGPDVYQTFTEGRSQHEWIKYLHAKTKERNPEMPDYEEMKTTGI FKKKCPEEHYVAFRAFRVDPQANPLKTPSGKIEIYSERLAKIADTWELKKDEIIHPLPAY TPGFDGWDDPLRKTYPLQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPIDAQARGIRH GDTVRVFNNNGEMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSINILTSHRPS PLAKGNPSHSNLVQIEKV >gi|296918667|gb|GG773033.1| GENE 433 451720 - 454146 2180 808 aa, chain - ## HITS:1 COG:ynfE KEGG:ns NR:ns ## COG: ynfE COG0243 # Protein_GI_number: 16129545 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 808 1 808 808 1660 98.0 0 MSKNEQMVGISRRTLVKSTAIGSLALAAGGFSLPFTLRSAEAAVQQANEKVVWGACSVNC GSRCALRLHVKDNEVTWVETDNTGSDEYGNHQVRACLRGRSIRRRINHPDRLNYPMKRVG KRGEGKFERISWDEALDTIASSLKKTVKQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKR LMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTTDIENSKLVVMFGNNPAETRMSGG GITYLLEKAREKSNAKMIVIDPRYTDTAAGREDEWLPIRPGTDAALVAGIAWVLINENLV DQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGEGDDKTAKTPQWASQITGIPVDRIIKL AREIGTAKPAYICQGWGPQRQANGELTARAIAMLPILTGNVGISGGNSGARESTYTITIE RLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQH SDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYL IFLQPVTSEKFERKPIYWILSEVAKRLGPDVYQKFTEGRTQEQWLQHLYAKMLAKDPALP SYDELKKMGIYKRKDPNGHFVAYKAFRDDPEANPLKTPSGKIEIYSSKLAEIARTWELEK DEVISPLPVYASTFEGWDSPERSAFPLQLFGFHYKSRTHSTYGNIDVLKAACRQEVWINP IDAQKRGIANGDMVRVFNHRGEVRLPAKVTPRILPGVSAMGQGAWHEANMSGDKIDHGGC VNTLTTLRPSPLAKGNPQHTNLVEIEKI >gi|296918667|gb|GG773033.1| GENE 434 454345 - 454650 176 101 aa, chain - ## HITS:1 COG:no KEGG:c1976 NR:ns ## KEGG: c1976 # Name: ynfD # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 101 15 115 115 159 99.0 2e-38 MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQP DSQVVGHCANDTHKILYTRTTSGNVSAPAQSTQDNAPAEPQ >gi|296918667|gb|GG773033.1| GENE 435 454722 - 455468 546 248 aa, chain + ## HITS:1 COG:no KEGG:ECBD_2061 NR:ns ## KEGG: ECBD_2061 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 248 1 248 248 477 97.0 1e-133 MIENYLYSQVTVVKYKLLPCLLAILLTGCDRTEVTLSFTPEMASFSNEFDFDPLRGPVKD FTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTLVALVLDANYYRDAETLEKRVR LQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKSNDKTLSVS ATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDNHANPVDCQLIIVDEGVKPAVERVYT IKNTIDYY >gi|296918667|gb|GG773033.1| GENE 436 455471 - 456031 486 186 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116490772|ref|YP_810316.1| acetyltransferase [Oenococcus oeni PSU-1] # 7 168 3 164 167 191 54 4e-47 MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRF VVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKL YLIVDKENEKAIHIYRKLGFTVEGELMHEFFINGQYRNAIRMCIFQHQYLAEHKTPGQTL LKPTAQ >gi|296918667|gb|GG773033.1| GENE 437 456066 - 456407 293 113 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1628 NR:ns ## KEGG: ECS88_1628 # Name: ynfB # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 113 1 113 113 204 100.0 7e-52 MKITLSKRIGLLAFLLPCALALSTTVHAETNKLVIESGDSAQSRQRAAMEKEQWNDTRNL RQKVNKRTEKEWDKADAAFDNRDKCEQSANINAYWEPNTLRCLDRRTGRVIIP >gi|296918667|gb|GG773033.1| GENE 438 456542 - 456868 264 108 aa, chain + ## HITS:1 COG:ynfA KEGG:ns NR:ns ## COG: ynfA COG1742 # Protein_GI_number: 16129540 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 108 1 108 108 163 99.0 7e-41 MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVY AAYGGVYVCTALIWLRVVDGVKLTLYDWTGALIALCGMLIIVAGWGRT >gi|296918667|gb|GG773033.1| GENE 439 457074 - 458288 1429 404 aa, chain + ## HITS:1 COG:rspA KEGG:ns NR:ns ## COG: rspA COG4948 # Protein_GI_number: 16129539 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 404 1 404 404 864 99.0 0 MKIVKAEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVASYLQDHLCPQLIGRDA HRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLGGASREGVMVY CHTTGHSIDEALDDYARHQELGFKAIRVQCGIPGMKTTYGMSKGKGLAYEPATKGQWPEE QLWSTEKYLDFMPKLFDAVRNKFGFDEHLLHDMHHRLTPIEAARFGKSIEDYRMFWMEDP TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTLTHAGGITGMRRI ADFASLYQVRTGSHGPSDLSPVCMAAALHFDLWVPNFGVQEYMGYSEQMLEVFPHNWTFD NGYMHPGEKPGLGIEFDEKLAAKYPYEPAYLPVARLEDGTLWNW >gi|296918667|gb|GG773033.1| GENE 440 458300 - 459319 905 339 aa, chain + ## HITS:1 COG:rspB KEGG:ns NR:ns ## COG: rspB COG1063 # Protein_GI_number: 16129538 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 339 1 339 339 674 98.0 0 MKSILIEKPNQLSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHE FFGVIDAVGDGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEY AVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVL KGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAEKGIKPTLIIDAACHPS ILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDWLSKGL IKPEKLITHTFDFQHVADAISLFEQDQKHCCKVLLTFSE >gi|296918667|gb|GG773033.1| GENE 441 459483 - 459731 267 82 aa, chain + ## HITS:1 COG:ZydfJ KEGG:ns NR:ns ## COG: ZydfJ COG0477 # Protein_GI_number: 15801590 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 82 346 427 427 155 98.0 3e-38 MAISKEIGGLIASGFGPILAGIFCTMTESWYPIAIMIMAYSVIGLISALKMPEVKDRDLS ALEDAAEDQPHVVRAAQPSRSL >gi|296918667|gb|GG773033.1| GENE 442 459820 - 461280 1393 486 aa, chain + ## HITS:1 COG:ECs2151 KEGG:ns NR:ns ## COG: ECs2151 COG0246 # Protein_GI_number: 15831405 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 486 1 486 486 965 97.0 0 MGNHLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLI GGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQIDGLETVLAAMCEPQIAIV SLTITEKGYFHSPATGQLMLDHPMVVADVQNPHQPKTATGVIVEALARRKAAGLPAFTVM SCDNMPENGHVMRDVVTSYAQAIDVKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQL TGVRDAAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLA YLGYLAGYQHINDCMEDEHYRHAAYTLMLQEQAPTLKVQGVDLQDYANRLIERYSNPALR HRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVAGWMRYVGGVDEQGNPIEISD PLLPVIQKAVQSSAEGTARVQSLLAIKAIFGDDLPGNSLFTTKVTEAYLSLLAHGAKATV AKYSVK >gi|296918667|gb|GG773033.1| GENE 443 461316 - 461519 376 67 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_1560 NR:ns ## KEGG: ECIAI1_1560 # Name: ydfZ # Def: putative selenium carrying protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 67 1 67 67 114 100.0 2e-24 MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLD LIRLGMN >gi|296918667|gb|GG773033.1| GENE 444 461696 - 462382 664 228 aa, chain - ## HITS:1 COG:ECs2149 KEGG:ns NR:ns ## COG: ECs2149 COG1802 # Protein_GI_number: 15831403 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 414 100.0 1e-116 MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLA ENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQ RIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEML LRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE >gi|296918667|gb|GG773033.1| GENE 445 462471 - 463217 905 248 aa, chain - ## HITS:1 COG:ydfG KEGG:ns NR:ns ## COG: ydfG COG4221 # Protein_GI_number: 16129498 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Escherichia coli K12 # 1 248 1 248 248 498 99.0 1e-141 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAA IEEMLASLPAEWSNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPG MVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV GGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSY AGLNVHRQ >gi|296918667|gb|GG773033.1| GENE 446 463363 - 465399 1736 678 aa, chain + ## HITS:1 COG:ECs2147 KEGG:ns NR:ns ## COG: ECs2147 COG0339 # Protein_GI_number: 15831401 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Escherichia coli O157:H7 # 1 678 4 681 681 1308 98.0 0 MNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGIQQKRAEIAAIALNPQTPDFKNTILALE QSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAELANDIYLNGELFARVDAVWQRR ESLGLDSESIRLVEVIHQRFVLAGAKLEQADKAKLKVLNTEAATLTSQFNQRLLAANKSG GLVVNDIAQLAGMSEQEIALAAEAAREKGLDNNWLIPLLNTTQQPVLAELRDRATREKLF TAGWTRAEKNDANDTRAIIQRLVEIRVQQAKLLGFPHYAAWKIADQMAKTPEAALNFMRE IVPAARQRASDELASIQAVIDKQQGGFSAQPWDWAFYAEQVRREKFDLDESQLKPYFELN TVLNEGVFWTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDSKSG GAWMGNFVEQSTLNETHPVIYNVCNYQKPAAGEPALLLWDDVITLFHEFGHTLHGLFARQ RYATLSGTNTPRDFVEFPSQINEHWATHPQVFARYARHYQSGAAMPDELQQKMRNASLFN KGYEMSELLSAALLDMRWHCLEENEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHI FGGGYAAGYYAYLWTQMLADDGYQWFVEQGGLTRENGRRFREAILSRGNSEDLERLYRQW RGKAPQIMPMLQHRGLNV >gi|296918667|gb|GG773033.1| GENE 447 465907 - 466797 429 296 aa, chain + ## HITS:1 COG:ydeH_2 KEGG:ns NR:ns ## COG: ydeH_2 COG2199 # Protein_GI_number: 16129494 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 121 296 1 176 176 359 98.0 4e-99 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFRSVVARDASKPEITDNHSYGLCQFGRWIDH LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY KIYLLTIRSSMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLI GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKATNDEEACRAGVRICQLVDNHAITH SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV >gi|296918667|gb|GG773033.1| GENE 448 467067 - 467162 66 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLGNMNVFMAVLGIILFSGFLAAYFSHKWDD >gi|296918667|gb|GG773033.1| GENE 449 467289 - 468476 916 395 aa, chain - ## HITS:1 COG:ydeF KEGG:ns NR:ns ## COG: ydeF COG0477 # Protein_GI_number: 16129493 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 395 1 395 395 652 97.0 0 MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVIFS LGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFATVLKAW FADNLSSNSKTKIFSINYTMLNIGWTIGPPLGTLLVMQSINLPFWLAAICSAFPMLFIQI WVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGD FAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLVGFIFSGNSLLL WGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGIVLTSL PPFSLFIILALVIVVAWVLMLKGIRARPWGQPALC >gi|296918667|gb|GG773033.1| GENE 450 468671 - 469570 827 299 aa, chain + ## HITS:1 COG:ECs2140 KEGG:ns NR:ns ## COG: ECs2140 COG0697 # Protein_GI_number: 15831394 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 463 95.0 1e-130 MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNL LLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLHGKQLAGI ALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHATRPAVMSLVIW SALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYE TWRVAPLSLLVPVVGLASAALLLDERLTGLQFFGAVLIMTGLYINVFGLRWRKAVKVRG >gi|296918667|gb|GG773033.1| GENE 451 469615 - 470313 237 232 aa, chain - ## HITS:1 COG:ECs4624 KEGG:ns NR:ns ## COG: ECs4624 COG2188 # Protein_GI_number: 15833878 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 232 1 232 238 172 35.0 5e-43 MIFQKIARLLKSEINGNSWHVGDLLPSEAELAVRYNVSRNTLRKALSLLEGEGIIHRKHG SGTYIQKKNFVAHIDHMNSFSEIAHKSGKEAGSQIMKFEVQDASPTIATELNLVTGEQVY YIKRLRFIEDNAAQLEETWMSVARFPDLTVSHMQKSKFSYIENECGIKIIGTFETFSPTF PTPEIASILRISPRDPILKIQTQAVDSNSIPLDYSLLYSNIFEFQVKYFFPR >gi|296918667|gb|GG773033.1| GENE 452 470512 - 470823 366 103 aa, chain + ## HITS:1 COG:lin2905 KEGG:ns NR:ns ## COG: lin2905 COG1440 # Protein_GI_number: 16801964 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 97 1 95 100 101 58.0 3e-22 MKKILLVCAAGMSTSMLVKRMIDHATAISLEVNISALAIAEAKGKIKNNEVDVVLLGPQV RFQKPEIEAVAQGKMPVAVIEMKDYGTMNGQAVLEFAMKLLQE >gi|296918667|gb|GG773033.1| GENE 453 470938 - 472260 831 440 aa, chain + ## HITS:1 COG:lin2906 KEGG:ns NR:ns ## COG: lin2906 COG1455 # Protein_GI_number: 16801965 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 433 1 433 450 570 69.0 1e-162 MGLMASFERGMERFLVPVAIKLNSQKHVAAVRDGFVFTFPIIMASSLIILINFAILSPDG FIAGLLHLNSIFPNLEKAQAIFTPVMNGSVNIMSIMIAFLVARNVAISYEQDDLLCGLTA IGAFFIVYTPYQMIDGQAFLTTKYLGAQGLFVAVIVALITSEIFCRLARNPKITITMPAA VPPAVARSFKVLLPIFFVMVFFSALNYCLTLISPAGLNDLIYTLIQTPLKHMGTNIFAVI ILGAVGNFLWVLGIHGPNTTSAIRETVFSEANLENLSWAAQHGTTWGAPYPITWTSINDA FANCGGSGMTLGLLLAIFIASKRAEYRDLAKMSFIPGIFNINEPIMFGLPIVLNPIMMVP FIMVPIVNCAIGYFFVSMEIIPPVAYAVPWTTPGPLIAFLGTGGNWLALLVGFLCLGVAI MIYLPFVIAANKVNNMATNG >gi|296918667|gb|GG773033.1| GENE 454 472288 - 472599 338 103 aa, chain + ## HITS:1 COG:YPO2680 KEGG:ns NR:ns ## COG: YPO2680 COG1447 # Protein_GI_number: 16122885 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Yersinia pestis # 3 102 16 115 115 81 51.0 3e-16 MFADEELVMELLINAGQARSDAMEAIRCAGQKDWQGATKLMASSESACLQAHKIQTALIS QDEGCGKIEVNLILIHAQDHLMNAILCQDLAREIISLRKELHA >gi|296918667|gb|GG773033.1| GENE 455 472654 - 474327 1346 557 aa, chain + ## HITS:1 COG:yieC KEGG:ns NR:ns ## COG: yieC COG4580 # Protein_GI_number: 16131588 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli K12 # 20 557 19 538 538 541 52.0 1e-153 MNIKTLNVSLLSISIITALFPLNAMATKLTIEQRLELLENELSQNKQELKATQNELGVYK FRLSTLQKSITENKYQSASLAEISATSPVADNIKNENGEQNSFAAAHTINGSQQIAVIES KGDKTTIESVTLKDISKYIKDDIGFSYQGYFRSGWGTGNHGSPQTYAAGSLGRFGNEMSG WFDLTLNQRVYNQDGRTANAVVTYDGNVGQQYNDAWFGDSANENIMQFSDIYLTTRGFLP FAREAEFWVGKHKLPQYEIQMLDWKTLTTDVAAGVGIENWALGVGLFDMSLSRDDVDVYS RDFTRTSQMNTNSVDVRYRNIPLWDDATLSLMAKYSAPNKTDQQQDNENDDSYFEMKDSW MLASVLRQNLQRDTFNEFTLQVANNSYASSFASFSDASNTMAHGRYYYGDHTNGIAWRLI SQGEMYLTDNIIMANALVYSHGEDVYSYESGAHSDFDSIRTVIRPAWIWNTWNQTGLELG WFKQQNKTQQGVTLNESAYKTTLWHALKVGESILGSRPEIRFYGTYINILDNELSNFKFN ENSKDEFMAGIQAEVWW >gi|296918667|gb|GG773033.1| GENE 456 474351 - 475790 1013 479 aa, chain + ## HITS:1 COG:SP0303 KEGG:ns NR:ns ## COG: SP0303 COG2723 # Protein_GI_number: 15900236 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 1 479 1 477 478 728 71.0 0 MSGFKEDFLWGGAVAAHQLEGGWNEGGKGISIADVMTAGAHGVPREVTEGVIDGLNYPNH EAIDFYHRYKTDIQLFAGMGFKCFRTSIAWTRIFPQGDEQEPNEEGLQFYDDLFDECLKQ GMEPVVTLSHFEMPYHLVTKYGGWRNRKLIDFFIHFASTVFTRYKAKVKYWMTFNEINNQ VNFSESLCPFTNSGILYSPEEDLNEREQIMYQAVHYELVASALAVQTGKLINPEFNIGCM IAMCPIYPLTCAPNDMMMATKAMHRRYWFTDVHARGYYPQHMLNYFARKGFNLDITPDDN AILARGCVDFIGFSYYMSFTTQFSPDNPQLDYVEPRDLVSNPYIDTSEWGWQIDPAGLRY SLNWFWDHFQLPLFIVENGFGAVDQRQADGTVNDHYRIDYFSSHIREMKKAVVEDGVDLI GYTPWGCIDLVSAGTGEMKKRYGMIYVDKDNEGKGTLERIRKASFYWYRDLIANNGENI >gi|296918667|gb|GG773033.1| GENE 457 475847 - 476065 128 72 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1608 NR:ns ## KEGG: ECS88_1608 # Name: marB # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 72 1 72 72 127 100.0 1e-28 MKPLLSAIATALILFSAQGVAEQTTQPVVTSCGNVVVVPTSQEQPPFDLNHMGTGSDKSD ALGVPYYNQHAM >gi|296918667|gb|GG773033.1| GENE 458 476097 - 476480 265 127 aa, chain - ## HITS:1 COG:ECs2138 KEGG:ns NR:ns ## COG: ECs2138 COG2207 # Protein_GI_number: 15831392 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 127 3 129 129 232 99.0 1e-61 MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLH PLNHYNN >gi|296918667|gb|GG773033.1| GENE 459 476501 - 476935 418 144 aa, chain - ## HITS:1 COG:STM1520 KEGG:ns NR:ns ## COG: STM1520 COG1846 # Protein_GI_number: 16764865 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 144 1 144 144 256 90.0 9e-69 MKNTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFKVLCSIRCAACITPVEL KKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTSGAAICEQCHQLVGQDLH QELTKNLTADEVATLEHLLKKVLP >gi|296918667|gb|GG773033.1| GENE 460 477147 - 477812 684 221 aa, chain + ## HITS:1 COG:marC KEGG:ns NR:ns ## COG: marC COG2095 # Protein_GI_number: 16129488 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Escherichia coli K12 # 1 221 1 221 221 363 99.0 1e-100 MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMSSAERNRQSLMASVYVFAIMMVAYY AGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSPEAKSKSEELEDEPSANIA FVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAPPLIFFLVAVILWGSLRSSGA IMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIKTYH >gi|296918667|gb|GG773033.1| GENE 461 477837 - 479027 922 396 aa, chain - ## HITS:1 COG:ydeA KEGG:ns NR:ns ## COG: ydeA COG2814 # Protein_GI_number: 16129487 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 396 1 396 396 571 99.0 1e-163 MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAHSFHMQTAQVGIMLTIYAWV VALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFTVLVISRIGVAFAHAIFWS ITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIVGQYFGWRMTFFAIGIGALIT LLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIA GFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIH LGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQVSLHW SMSMIGYVGAVPAFAALIWSIIIFRRWPVTLEEQTQ >gi|296918667|gb|GG773033.1| GENE 462 479366 - 480247 736 293 aa, chain - ## HITS:1 COG:yneJ KEGG:ns NR:ns ## COG: yneJ COG0583 # Protein_GI_number: 16129485 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 293 1 293 293 583 97.0 1e-166 MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELGVDLFIRENQRLRLSPA GHNFLRYSQQILTLVDEARSVVAGDEPQGLFSLGSLESTAAVRIPATLAEFNRRYPKIQF SLSTGPSGTMLEGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIVTPQGHAPVTRASQV NGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVVAGAGIALIPRSMLE SMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLEAFIQLLDAPDSAKQGYQ >gi|296918667|gb|GG773033.1| GENE 463 480348 - 481736 1426 462 aa, chain + ## HITS:1 COG:yneI KEGG:ns NR:ns ## COG: yneI COG1012 # Protein_GI_number: 16129484 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 461 9 469 470 887 99.0 0 MTITPATHAISINPATGEQLSVLPWAGVDDIENALQLAAAGFRDWRETNIDYRAEKLRDI GKALRARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQA VIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLKHAPNVMGCAQLIAQVFKDAG IPQGVYGWLNADNDGVSLMIKDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDP FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDP RDEENALGPMARFDLRDELHHQVEKTLAQGARLLLGGEKIAGAGNYYPPTVLANVTPEMT AFREEMFGPVAAITIAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFIN GYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDRN >gi|296918667|gb|GG773033.1| GENE 464 481812 - 482726 647 304 aa, chain + ## HITS:1 COG:ECs2131 KEGG:ns NR:ns ## COG: ECs2131 COG2066 # Protein_GI_number: 15831385 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Escherichia coli O157:H7 # 1 304 5 308 308 612 100.0 1e-175 MDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIAICTVDGQLFQAGDAQERFSI QSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLVQLEMEQGIPRNPFINAGALVVC DMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARSEFEHSARNAAIAWLMKSFGNFHHD VTTVLQNYFHYCALKMSCVELARTFVFLANQGKAIHIDEPVVTPMQARQINALMATSGMY QNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAIAVWSPELDDAGNSLAGIAVLEQLTKQLG RSVY >gi|296918667|gb|GG773033.1| GENE 465 482726 - 482986 173 86 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_1649 NR:ns ## KEGG: EcSMS35_1649 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 78 1 78 119 153 100.0 3e-36 MQSLDPLFARLSRSKFRSRFRLGVKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGK QTPMRGHPVFIAQHATATSPPPGLSG >gi|296918667|gb|GG773033.1| GENE 466 483228 - 484646 1259 472 aa, chain + ## HITS:1 COG:Z2182_2 KEGG:ns NR:ns ## COG: Z2182_2 COG2199 # Protein_GI_number: 15801615 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 EDL933 # 288 472 1 185 185 380 98.0 1e-105 MHVQPISTFRLFQEGHLLRNSIAIFVLTTLFYFIGAELRLVHELSLFWPLNGVMAGVFAR YVWLNRLHYYAISYVAMLVYDAITTEWGLVSLAINFSNMMFIVTVALLVARDKSLGKNKY EPVSALRLFNYCLLAALLCAIVGAIGSVSIDSLDFWPLLADWFSEQFSTGVLIVPCMLTL AIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTF VTGAVEVVLVANSVIDISVGSPFSIPQMFSARLGIATMAICPIMVSFSVAAIHSLMKQVA LRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSV FAQHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYL TVSIGVGSGCASYRTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV >gi|296918667|gb|GG773033.1| GENE 467 484873 - 486324 1627 483 aa, chain + ## HITS:1 COG:ECs2128 KEGG:ns NR:ns ## COG: ECs2128 COG0246 # Protein_GI_number: 15831382 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 483 1 483 483 994 99.0 0 MKTLNRRDFPGAQYPERIIQFGEGNFLRAFVDWQIDLLNEHTDLNSGVVVVRPIETSFPP SLSTQDGLYTTIIRGLNEKGEAVSDARLIRSVNREISVYSEYDEFLKLAHNPEMRFVFSN TTEAGISYHAGDKFDDAPAVSYPAKLTRLLFERFSHFNGALDKGWIIIPCELIDYNGDAL RELVLRYAQEWALPEAFIQWLDQANSFCSTLVDRIVTGYPRDEVAKLEEELGYHDGFLDT AEHFYLFVIQGPKSLATELRLDKYPLNVLIVDDIKPYKERKVAILNGAHTALVPVAFQAG LDTVGEAMNDAEICAFVEKAIYEEIIPVLDLPRDELESFASAVTGRFRNPYIKHQLLSIA LNGMTKFRTRILPQLLAGQKANGTLPARLTFALAALIAFYRGERNGETYPVQDDAHWLER YQQLWSQYRDRVIGTQELVAIVLAEKDHWEQDLTQVPGLVEQVANDLDAILEKGMREAVR PLC >gi|296918667|gb|GG773033.1| GENE 468 486521 - 487435 657 304 aa, chain + ## HITS:1 COG:yneE KEGG:ns NR:ns ## COG: yneE COG3781 # Protein_GI_number: 16129479 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 304 18 321 321 594 99.0 1e-170 MIVRPQQHWLRRIFVWHGSVLSKISSRLLLNFLFSIAVIFMLPWYTHLGIKFTLAPFSIL GVAIAIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKTTLPDSASVREFARLQIAF AHCLRMTLRKQPQAEVLAQYLKTEDLQRVLASNSPANRILLIMGEWLAVQRRNGQLSDIL FISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFI SVLISYTFISLDCLAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDEAEIPAKILPDRH YQLT >gi|296918667|gb|GG773033.1| GENE 469 487439 - 488197 636 252 aa, chain - ## HITS:1 COG:ECs2126 KEGG:ns NR:ns ## COG: ECs2126 COG4106 # Protein_GI_number: 15831380 # Func_class: R General function prediction only # Function: Trans-aconitate methyltransferase # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 479 96.0 1e-135 MSDWNPSLYLHFAAERSRPAVELLARVSLENIEYIADLGCGPGNSTALLHQRWPAARITG IDSSPAMIAEARSALPDCLFVEADIRNWQPEQALDLIFANASLQWLPDHYELFPHLVSLL SPLGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVHAYYDILSEAGCEVDIWR TTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQHFLTRYHQMLEEQYPLQENGQILLA FPRLFIVARRTE >gi|296918667|gb|GG773033.1| GENE 470 488505 - 488771 280 88 aa, chain + ## HITS:1 COG:hipB KEGG:ns NR:ns ## COG: hipB COG1396 # Protein_GI_number: 16129467 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 88 1 88 88 135 94.0 2e-32 MMSFQKIYSPMQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPNNTSLTTFFKI LQSLELSMTLCDAKNASPEATEQQDLEW >gi|296918667|gb|GG773033.1| GENE 471 488771 - 490093 691 440 aa, chain + ## HITS:1 COG:hipA KEGG:ns NR:ns ## COG: hipA COG3550 # Protein_GI_number: 16129466 # Func_class: R General function prediction only # Function: Uncharacterized protein related to capsule biosynthesis enzymes # Organism: Escherichia coli K12 # 1 440 1 440 440 890 97.0 0 MPKLVTWMNNQRVGELTKLANGAHTFKYAPEWLASRYARPLSLSLPLQRRNITSDAVFNF FDNLLPDSPIVRDRIVKRYHAKSRQPFDLLSEIGRDSVGAVTLIPEDETVMCPIMAWEKL TEARLEEVLTAYKADIPLGMIREENDFRISVAGAQEKTALLRIGNDWCIPKGITPTTHII KLPIGEIRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGRVRALAVKRFDRRW NTERTVLLRLPQEDMCQTFGLPSSVKYESDGGPGIAQIMAFLMGSSEALKDRYDFMKFQV FQWLIGATDGHAKNFSVFIQAGGSYRLTPFYDIISAFPVLGGTGIHISDLKLAMGLNASK GKKTAIDKIYPRHFLATAKVLKFPEVQMHEILSDFARMIPAALDNVKTSLPTDFPENVVT AVETNVLRLHGRLSREYGIK >gi|296918667|gb|GG773033.1| GENE 472 490133 - 490333 79 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|331657514|ref|ZP_08358476.1| ## NR: gi|331657514|ref|ZP_08358476.1| toxin-antitoxin system, toxin component, HipA family [Escherichia coli TA206] toxin-antitoxin system, toxin component, HipA family [Escherichia coli TA206] # 4 66 198 260 260 127 93.0 4e-28 MNRQRLDSPLVYVGAHNVYYVKLPVKVLYFTIHIHTQINQYVVISDFPPVSVEKFNLCSV MAHHRP >gi|296918667|gb|GG773033.1| GENE 473 490352 - 490609 143 85 aa, chain - ## HITS:1 COG:YPO2002 KEGG:ns NR:ns ## COG: YPO2002 COG1073 # Protein_GI_number: 16122244 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Yersinia pestis # 8 69 211 272 363 101 79.0 3e-22 MRFEGNASTRKSIQQRLKQASDARAQEVAGSEVLYSGDANLTDEQIAKLPFALYRQGYEY YWKTHAHPNIFRSVRDIVPSKRWLL >gi|296918667|gb|GG773033.1| GENE 474 490740 - 491234 175 164 aa, chain + ## HITS:1 COG:Cgl1024 KEGG:ns NR:ns ## COG: Cgl1024 COG0702 # Protein_GI_number: 19552274 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Corynebacterium glutamicum # 5 115 62 166 178 132 59.0 3e-31 MDTPVRIALMTTIGVTERLSSWNQRTEVHDWKRRSERLVRASGHIYTIVRPGWFDYNNDD EHRIVMLQGDRRHAGTPEDGVISREQIAQVLVTALSNDAAKNKTFELVAERGEAQQDLTP LFAELRNDNPQKNDGVFDIDNMPLTEEPECVINDLNLYSKNSKI >gi|296918667|gb|GG773033.1| GENE 475 492010 - 492573 385 187 aa, chain + ## HITS:1 COG:ECs2113 KEGG:ns NR:ns ## COG: ECs2113 COG3539 # Protein_GI_number: 15831367 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 283 98.0 2e-76 MKLKHVGIIVVSVLAMSSAAVSAAEGDESVTTTVNGGVIHFKGEVVNAACAIDSESMNQT VELGQVRSSRLAKAGDLSSAVGFNIKLNDCDTNVSSNAAVAFLGTTVTSNDDTLALQSSA AGSAQNVGIQILDRTGEVLVLDGATFSAKTDLIDGTNILPFQARYIALGQSVAGTANADA TFKVQYL >gi|296918667|gb|GG773033.1| GENE 476 492935 - 493645 483 236 aa, chain + ## HITS:1 COG:Z2201 KEGG:ns NR:ns ## COG: Z2201 COG3121 # Protein_GI_number: 15801632 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 EDL933 # 1 236 4 239 239 434 97.0 1e-122 MQTTRTPYSVSFMATVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPAS VYLIQSWIENAGDQKDTQFVITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKA IPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEEAPAMLRFRRSGSKLTLINPTPYF ITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAVTGDISFQTINDYGALTPRIKATMQ >gi|296918667|gb|GG773033.1| GENE 477 493687 - 496338 1002 883 aa, chain + ## HITS:1 COG:Z2203 KEGG:ns NR:ns ## COG: Z2203 COG3188 # Protein_GI_number: 15801633 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 EDL933 # 1 883 1 883 883 1643 97.0 0 MTAFRAAFKAYRMHQVLILPRFARLTFALGLATAVFPVDAEYYFNPRFLSNDLAESVDLS AFTKGREAPPGTYRVDIYLNDEFMASRDITFIADDNNADLIPCLSTDLLVSLGIKKSALL DNKEHSADKHVPDNSACTPLQDRLADASSEFDVGQQHLSLSVPQIYVGRMARGYVSPDLW EEGINAGLLNYSFNGNSINNRSNHNAGKSNYAYLNLQSGINIGSWRLRDNSTWSYNSGSS NSSDSNKWQHINTSAERDIIPLRSRLTVGDSYTDGDIFDSVNFRGLKINSTEAMLPDSQH GFAPVIHGIARGTAQVSVKQNGYDVYQTTVPPGPFTIDDINSAANGGNLQVTIKEADGSI QTLYVPYSSVPVLQRAGYTRYALAMGEYRSGNNLQSTPKFVQASLMHGLKGNWTPYGGMQ IAEDYQAFNLGIGKDLGLFGAFSFDITQANTTLADDTRHSGQSVKSVYSKSFYQTGTNIQ VAGYRYSTQGFYNLSDSAYSRMSGYTVKPPTGDTSEQTLFIDYFNLFYSKRGQEQISISQ QLGNYGTTFFSASRQSYWNTSRSDQQISFGLNVPFGDITTSLNYSYSNNIWQNDRDHLLA FTLNVPFSHWMRTDSQSAFHNSNASYSMSNDLKGGMTNLSGVYGTLLPDNNLNYSVQVGN TQGGNTSSGTSGYSSLNYRGAYGNTNVGYSRSGDSSQIYYGMSGGIIAHADGITFGQPLG DTMVLVKAPGADNVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETV VTVIPTHGAIARATFNAQIGGKVLMTLKYGNKSVPFGAIVTHGENKNGSIVAENGQVYLT GLPQSGKLQVSWGKDKNSNCIVDYKLPVVSPGTLLNQQTAICR >gi|296918667|gb|GG773033.1| GENE 478 496352 - 496882 239 176 aa, chain + ## HITS:1 COG:ECs2109 KEGG:ns NR:ns ## COG: ECs2109 COG3539 # Protein_GI_number: 15831363 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 334 98.0 4e-92 MKYNNIIFLGLCLGLTTYSALSADSVIKISGRVLDYGCTVSSDSLNFTVDLQKNSARQFP TTGSTSPVVPFQITLSECSKGTTGVRVAFNGIEDAENNTLLKLDEGSNTASGLGIEILDG NMRPVKLNDLHAGMQWIPLVPEQNNILPYSARLKSTQKSVNPGLVSASATFTLEFQ >gi|296918667|gb|GG773033.1| GENE 479 496895 - 497398 196 167 aa, chain + ## HITS:1 COG:ydeR KEGG:ns NR:ns ## COG: ydeR COG3539 # Protein_GI_number: 16129462 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 167 1 167 167 300 97.0 6e-82 MKRLHKRFLLATFCTLFTATLQAADVTITVNGRVVAKPCTIQTKEANVNLGDLYTRNLQQ PGSASGWHNITLSLTDCPIETSAVTAIVTGSTDNTGYYKNEGTAENIQIELRDDQDATLK NGDSKTVIVDVITRNAQFPLKARAITVNGNASQGTIEALINVIYTWQ >gi|296918667|gb|GG773033.1| GENE 480 497458 - 498372 298 304 aa, chain + ## HITS:1 COG:no KEGG:APECO1_629 NR:ns ## KEGG: APECO1_629 # Name: fmlD # Def: putative Fml fimbrial adhesin FmlD precursor # Organism: E.coli_APEC # Pathway: not_defined # 1 304 1 304 304 574 100.0 1e-162 MGKTFSIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDL SQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGD KTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNSVVM PTGGCTVDSRNVTVNLPDFPGSAEIPLGVYCSSEQKLSFYLSGATTDSARQVFANAAPDA TKASGVGVSLIRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVAAGAVQSVIGVT FIYE >gi|296918667|gb|GG773033.1| GENE 481 498711 - 500990 1304 759 aa, chain + ## HITS:1 COG:ydeP KEGG:ns NR:ns ## COG: ydeP COG0243 # Protein_GI_number: 16129460 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 759 1 759 759 1554 99.0 0 MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHS ASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDDVSD CYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSN MCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDA ASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAER TIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKP SAEFLDRLCERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGV LKPAGVMLKSECAVVAGIAQAALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRH PGGFHLINAAAERRWMTSSGKANFITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGM DDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN >gi|296918667|gb|GG773033.1| GENE 482 501238 - 501435 174 65 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1588 NR:ns ## KEGG: ECS88_1588 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 65 1 65 65 87 100.0 2e-16 MHATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLGISEMGRMARDLTHFII NSLLD >gi|296918667|gb|GG773033.1| GENE 483 501510 - 502271 309 253 aa, chain + ## HITS:1 COG:ECs2104 KEGG:ns NR:ns ## COG: ECs2104 COG2207 # Protein_GI_number: 15831358 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 505 99.0 1e-143 MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFNENTIKK YLQCTNIQTVTMPVPAKFLRASNVPTGLLNEMIAYLNSEERNHHNFSELLLFSCLSIFAA CKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLKQEQTTFSQ ILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVSKEYRCQRHT GMNTDNTMNALAI >gi|296918667|gb|GG773033.1| GENE 484 502673 - 504355 1356 560 aa, chain + ## HITS:1 COG:ECs2103 KEGG:ns NR:ns ## COG: ECs2103 COG3119 # Protein_GI_number: 15831357 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Escherichia coli O157:H7 # 1 560 12 571 571 1088 99.0 0 MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAFSDFTPTEYSTKGKPNI IVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAIEAAQKSTPTLLSLMDEGV RFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGIPLTETFLPELFQNHGYYTAA VGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQNRGFDYFMGFHAAGTAYYNSPS LFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPFMLYLAYNAPHLPNDNPAPEQYQKQ FNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQYDNTIILFTSDNGAVIDGPLPLNGAQ KGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKLISAMDFYPTALDAADISIPKDLKLDGVS LLPWLQNKKQGEPHKNLTWITSYSHWFDEENIPFWDNYHKFVRHQSDDYPHNPNTEDLSQ FSYTVRNNDYSLVYTVENNQLGLYKLTDLQQKDNLAAANPQVVKEMQGVVREFIDNSQPP LSEVNQEKFNNIKKALSEAK >gi|296918667|gb|GG773033.1| GENE 485 504421 - 506073 1196 550 aa, chain - ## HITS:1 COG:no KEGG:APECO1_2913 NR:ns ## KEGG: APECO1_2913 # Name: yhjU # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 550 10 559 559 1071 100.0 0 MPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPIPRYSLHRLRHW IALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLFVAW LFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAATVAATGGAP VVGDIPAQTAPPTTANLNAWLNNFYNAEAKRKSIFPSSLPADAQPFELLVINICSLSWSD IEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLF DNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTA VLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELE KSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVID QPSSFLAISDLVVRVLDGKIFSEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRL NGGDWVPYPQ >gi|296918667|gb|GG773033.1| GENE 486 506097 - 506288 187 63 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_4903 NR:ns ## KEGG: ECH74115_4903 # Name: bcsF # Def: cellulose biosynthesis protein BcsF # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 63 1 63 63 104 100.0 1e-21 MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPRYVKPAGTLRRTEKARA TKK >gi|296918667|gb|GG773033.1| GENE 487 506285 - 507856 761 523 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3951 NR:ns ## KEGG: ECS88_3951 # Name: bcsE # Def: cellulose biosynthesis protease # Organism: E.coli_S88 # Pathway: not_defined # 1 523 1 523 523 1065 100.0 0 MRDIVDPVFSIGISSLWNELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVIS MDSDPAKIFQLDDSQGPEKITLFSMLNHEKGLYYLARDLQCSIDPHNYLFILVCANNAWQ NIPAERLRSWLDKMNKWSRLNHCSLLVINSGNNNDKQFSLLLEEYRSLFGLASLRFQGDQ HLLDIAFWCNEKGVSARQQLSVQQQNGCWTLVQHQEAEIQPRSDEKRILSNVAVLEGAPP LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRE NTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQP LKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIM TIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE QWGMPLPLAQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS >gi|296918667|gb|GG773033.1| GENE 488 508129 - 508317 210 62 aa, chain + ## HITS:1 COG:no KEGG:SDY_4555 NR:ns ## KEGG: SDY_4555 # Name: yhjR # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 62 1 62 62 107 100.0 2e-22 MNNNEPDTLPDPAIGYIFQNDILALKQAFSLPDIDYADISQREQLAAALKRWPLLAEFAQ QK >gi|296918667|gb|GG773033.1| GENE 489 508329 - 509081 676 250 aa, chain + ## HITS:1 COG:yhjQ KEGG:ns NR:ns ## COG: yhjQ COG1192 # Protein_GI_number: 16131406 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Escherichia coli K12 # 9 250 1 242 242 474 98.0 1e-134 MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWAR AMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRLSDICTGLQQLKASGRYQW ILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQ DDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYS GLKMPVGSAS >gi|296918667|gb|GG773033.1| GENE 490 509078 - 511696 2439 872 aa, chain + ## HITS:1 COG:yhjO KEGG:ns NR:ns ## COG: yhjO COG1215 # Protein_GI_number: 16131405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 872 17 888 888 1807 99.0 0 MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILAWIFIPLEHPRWQRIRA EHKNLYPHINASRPRPLDPVRYLIQTCWLLIGASRKETPKPRRRAFSGLQNIRGRYHQWM NELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSLILALICVTQPFNPLAQFIFL MLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAE TYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVDIFVPTYNEDLNVVKNTIYASLGID WPKDKLNIWILDDGGREEFRQFAQNVGVKYIARTTHEHAKAGNINNALKYAKGEFVSIFD CDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQ DGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAA GLATESLSAHIGQRIRWARGMVQIFRLDNPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIF LTAPLAFLLFHAYIIYAPALMIALFVLPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWY IAPPTLVALINPHKGKFNVTAKGGLVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYG PPTEMLTVVVSMVWVFYNLIILGGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCT VQDFSDGGLGIKINGQAQILEGQKVNLLLKRGQQEYVFPAQVARVMGNEVGLKLMPLTTQ QHIDFVQCTFARADTWALWQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRV LTSLVSWVVSFIPRRPERSETAQPSDQALAQQ >gi|296918667|gb|GG773033.1| GENE 491 511707 - 514046 2388 779 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C4064 NR:ns ## KEGG: UTI89_C4064 # Name: yhjN # Def: cellulose synthase regulator protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 779 30 808 808 1521 100.0 0 MKRKIFWICAVALGMSAFPSFMTQATPATQPLINAEPAVTAQAEQNPQVGQVMPGVQGAD APVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGMRSDEVVTKAMLNLEYTPS PSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPINPLFITDFNRVRLEFVGHYQD VCENPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPVPFFDPRDNRTNTLPMVFAGAPD VELQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRNAIVFATNDKRPDFLRDHPAVKAPV IEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGESVVVNEVKPLLPRKPYDA PNWVRTDRPVTFGELKTYEEQLQSSGLEPAAINVSLNLPPDLYLMRSTGIDMDINYRYTM PPVKDSSRMDISLNNQFLQSFNLSSKQEANRLLLRIPVLQGLLDGKTDVSIPALKLGATN QLRFDFEYMNPMPGGSVDNCITFQPVQNHVVIGDDSTIDFSKYYHFIPMPDLRAFANAGF PFSRMADLSQTITVMPKTPNEAQMETLLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDAD IMIVGGIPDKLKDDKQIDLLVQATESWVKTPMRQTPFPGIVPDESDRAAETQSTLTSSGA MAAVIGFQSPYNDQRSVIALLADSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLR VGDVYYVGHLPWFERLWYALANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE >gi|296918667|gb|GG773033.1| GENE 492 514053 - 515159 1152 368 aa, chain + ## HITS:1 COG:ECs4411 KEGG:ns NR:ns ## COG: ECs4411 COG3405 # Protein_GI_number: 15833665 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Escherichia coli O157:H7 # 1 368 1 368 368 723 99.0 0 MNVLRSGLVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYG MFFALAANDRAAFDNLLDWTQNNLAQGSLKEHLPAWLWGKKENSKWEVLDSNSASDGDVW MAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNP SYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLIS SYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGF SAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW GQECANSH >gi|296918667|gb|GG773033.1| GENE 493 515141 - 518614 3415 1157 aa, chain + ## HITS:1 COG:ZyhjLm KEGG:ns NR:ns ## COG: ZyhjLm COG0457 # Protein_GI_number: 15804991 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli O157:H7 EDL933 # 1 1157 1 1154 1154 2108 97.0 0 MRKFTLNIFTLSLGLAVMPMVEAAPTAQQQLLEQVRLGEATHREDLVQQSLYRLELIDPN NPDVIAARFRSLLRQGDIDGAQKQLDRLSQLAPSSNAYKSSRTTMLLSTPDGRQALQQAR LQATTGHAEEAVASYNKLFNGAPPEGDIAVEYWSTVAKIPARRGEAINQLKRINADTPGN TGLQNNLALLLFSSDRRDEGFAVLEQMAKSNAGREGASKIWYGQIKDMPVSDASVQALKK YLSIFSDGDSVAAAQSQLAEQQKQLADPAFRARAQGLAAVDSGMAGKAIPELQQAVRANP KDSEALGALGQAYSQKGDRANAVVNLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDA ALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDSGNTN AVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQA AALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLS GHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQVLETANRLRENGKEAEAEAMLRQQP PSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGLTEVDIAAGDKAAARSQL AKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKSQPPSMESAMVLRDGAKF EALAGDPTQALETYKDAMVASGVTTTRPQDNDTFTRLTRNDEKDDWLKRGVRSDTADLYR QQDLNVTLEHDYWGSSGTGGYSDLKAHTTMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNA DGKWDDNWGTCTLQDCSGNRSQSDSGASVAVGWRNDVWSWDIGTTPMGFNVVDVVGGISY SDDIGPLGYTVNAHRRPISSSLLAFGGQKDSPSNTGKKWGGVRADGVGLSLSYDKGEANG VWASLSGDQLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLG QGGYYSPQEYLSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEE AARQSNDGGSSQGFGYTARALLERRVTSNWFVGTAIDIQQAKDYAPSHFLLYVRYSAAGW QGDMDLPPQPLIPYADW >gi|296918667|gb|GG773033.1| GENE 494 518729 - 520684 1999 651 aa, chain + ## HITS:1 COG:ECs4409_3 KEGG:ns NR:ns ## COG: ECs4409_3 COG2200 # Protein_GI_number: 15833663 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 389 651 1 263 263 506 99.0 1e-143 MAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEA ILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPA NPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAR ELNAIPPQELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLP NKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM ILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDL TAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQQRLTEESDILNALENHQFAIWLQP QVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQ ERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAIL RPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLA QSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK >gi|296918667|gb|GG773033.1| GENE 495 520867 - 522153 1535 428 aa, chain + ## HITS:1 COG:dctA KEGG:ns NR:ns ## COG: dctA COG1301 # Protein_GI_number: 16131400 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Escherichia coli K12 # 1 428 1 428 428 733 100.0 0 MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKLIKMIIAPVIFCTVVTG IAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPGAGMNVDPATLDAKAVAVY ADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLFGFALHRLGSKGQLIFNVIES FSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVLVLGS IAKATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSF NLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLIVLLLSSKGAAGVTGSGFIVLAATLSA VGHLPVAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWVKELDHKKLDDVLNNRAPD GKTHELSS >gi|296918667|gb|GG773033.1| GENE 496 522415 - 523869 1619 484 aa, chain + ## HITS:1 COG:ECs4407 KEGG:ns NR:ns ## COG: ECs4407 COG0612 # Protein_GI_number: 15833661 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Escherichia coli O157:H7 # 1 484 15 498 498 897 99.0 0 MMATAGYVQADALQPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQ SGYSHAIPRIALTQSGGLDAAQARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDL LKEALSYLANATGKLTITPETINHALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPAD PLKQPVEAEKIKDFYQKWYTPDAMTLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPT LSPLRAEAVSIMTDAVRQDRLSIMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALS ASNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNAL VAQKKLELQKLFAAYARADTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLN QDLRQQLSNDMALILLQPKGEPEFNMKALQAAWDQIMAPSTAAAATSVATDDVHPEVTDI PPVQ >gi|296918667|gb|GG773033.1| GENE 497 523965 - 524894 1027 309 aa, chain - ## HITS:1 COG:kdgK KEGG:ns NR:ns ## COG: kdgK COG0524 # Protein_GI_number: 16131398 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 1 309 74 382 382 620 99.0 1e-178 MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFS QQMLDAWRGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAA ICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANGGKVIFDNNYRPRLWASKEET QQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAG EGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGIAEDAAKRGHLTASTVIQYRGA IIPREAMPA >gi|296918667|gb|GG773033.1| GENE 498 525126 - 525893 559 255 aa, chain + ## HITS:1 COG:yhjH KEGG:ns NR:ns ## COG: yhjH COG2200 # Protein_GI_number: 16131397 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 1 255 2 256 256 506 99.0 1e-143 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFVEHGLLASVNIDGPTLIALRQQPKI LRQIEDLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKI ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS RPAPIETLNTAVLAL >gi|296918667|gb|GG773033.1| GENE 499 525963 - 528023 1765 686 aa, chain + ## HITS:1 COG:ECs4404 KEGG:ns NR:ns ## COG: ECs4404 COG2982 # Protein_GI_number: 15833658 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 # 1 686 6 691 691 1321 99.0 0 MSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVW ERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPW IKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFQLDNILFDQGRIAIDDKVS KADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGML ALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLP DTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLIYTTGKPRPKLEGDVESRQ LRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDADVRFK GRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGIAGGSIAANIHLEGDKKPMQGRADIQ ARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNL MEIVGLNVGNYIVGAIFGDDEVRVNCAAANLDIANGVARPQVFAFDTENALINVTGTASF ASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPA AALLALISPSEGEANQCRTILSQMKK >gi|296918667|gb|GG773033.1| GENE 500 528064 - 529386 1632 440 aa, chain - ## HITS:1 COG:yhjE KEGG:ns NR:ns ## COG: yhjE COG0477 # Protein_GI_number: 16131395 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 440 1 440 440 676 98.0 0 MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATAAVIVFPHIFFPQGDPT AATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLLTMGISTVVIGLLPGYATI GIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRALYGSFPQLGAPIGFFFANGT FLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHESPVFEKVAKAKKQVKIPLG TLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFSTAAAPVGLGLPRNEVLWMLMMAVIG FAVMVPLAGLLADAFGRRKSMVVITTLIILFALFAFNPLLGSGNPALVFVFLLLGLSLMG LTFGPMGALLPELFPTEVRYTGASFSYNVSSILGASVAPYIAAWLQTNYGLGAVGLYLAA MAGLTLIALLLTHETRHQSL >gi|296918667|gb|GG773033.1| GENE 501 529779 - 530792 1047 337 aa, chain - ## HITS:1 COG:ECs4402 KEGG:ns NR:ns ## COG: ECs4402 COG1295 # Protein_GI_number: 15833656 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 337 1 337 337 663 100.0 0 MTQENEIKRPTQDLEHEPIKQLDNSEKGGKVSQALETVTTTAEKVQRQPVIAHLIRATER FNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLA ATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWV KYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFA NYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMKSPSGAAFGSVL GLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGKTQP >gi|296918667|gb|GG773033.1| GENE 502 530841 - 531722 690 293 aa, chain - ## HITS:1 COG:yhjC KEGG:ns NR:ns ## COG: yhjC COG0583 # Protein_GI_number: 16131393 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 293 31 323 323 579 97.0 1e-165 MQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGITYY QRAKDVLSNLSELDGLFQQDATSISGKLRIDIPSGIAKSLLLPRLSEFLYLHPGIELELS SHDRPVDILHDGFDCVIRTGALPEDGVIARSLGKLTMVNCASPHYLTRFGYPQSPDDLTS HAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLAAGIAGLGIIQIPRIAV REALRAGRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEHLD >gi|296918667|gb|GG773033.1| GENE 503 532260 - 532862 504 200 aa, chain + ## HITS:1 COG:yhjB KEGG:ns NR:ns ## COG: yhjB COG2197 # Protein_GI_number: 16131392 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli K12 # 1 200 1 200 200 392 99.0 1e-109 MQIVMFDRQSIFIHGMKISLQHRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF CYWLLQKTAVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL YRRLEVKNRTQAAMMLNISS >gi|296918667|gb|GG773033.1| GENE 504 532913 - 534562 1724 549 aa, chain - ## HITS:1 COG:ECs4399 KEGG:ns NR:ns ## COG: ECs4399 COG1626 # Protein_GI_number: 15833653 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 1112 99.0 0 MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMIEGLPASDALTPADRYL ELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRDFDLRKFVENHFWLPEVYS SEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQSYIVPGGRFSETYYWDSYFT MLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYYLSRSQPPVFALMVELFEEDGVR GARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLEDV ETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLFKLES AIANISALKGEKETEALFRQKASARRDAVNRYLWDDENGIYRDYDWRREQLALFSAAAIV PLYVGMANHEQADRLANAVRSRLLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMY GDDLLGDEIARNWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVR RLIGLYGEP >gi|296918667|gb|GG773033.1| GENE 505 534967 - 536364 1196 465 aa, chain + ## HITS:1 COG:yhjA KEGG:ns NR:ns ## COG: yhjA COG1858 # Protein_GI_number: 16131390 # Func_class: P Inorganic ion transport and metabolism # Function: Cytochrome c peroxidase # Organism: Escherichia coli K12 # 1 465 1 465 465 964 99.0 0 MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNKVLGFLREKGCD YCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAALLANKPVSQSDLNKIEWVM QYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYASNDTAPEHRNEPVQPIPQKL PTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDSRKTSIGVGGAVGPINAPTVF NSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKAQFLEVYPQG FSGENITDAIAEFEKTLITPDSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIIL GGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGDVP TLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ >gi|296918667|gb|GG773033.1| GENE 506 536575 - 536889 193 104 aa, chain + ## HITS:1 COG:ECs4397 KEGG:ns NR:ns ## COG: ECs4397 COG0076 # Protein_GI_number: 15833651 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Escherichia coli O157:H7 # 1 93 1 93 466 194 98.0 3e-50 MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNL ATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSPPPRRIFPPPY >gi|296918667|gb|GG773033.1| GENE 507 536901 - 538058 371 385 aa, chain + ## HITS:1 COG:ydeM KEGG:ns NR:ns ## COG: ydeM COG0641 # Protein_GI_number: 16129456 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli K12 # 1 385 6 390 390 789 98.0 0 MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIKQYIAASGNQVYFTWQG GEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEWCAFLKEHEFLVGISIDGP QELHDCYRRSNSGNGTFAKVIAAIERLKSYQIEFNTLTVINNINVHYPLEVYHFLKSIGS KHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAYGKFMSTIFMQWVKNDVGEIFIR QFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIYECDHFVYPQYKIGNINKSELKTMN SVQLTAQKKRISAKCQQCVYKPICNGGCPKHRITKVNNETVSYFCEGYKILFSTMVPYMN AMVELAKNRVPLYHIMDVAKQMENN >gi|296918667|gb|GG773033.1| GENE 508 538376 - 540034 905 552 aa, chain + ## HITS:1 COG:ECs2101 KEGG:ns NR:ns ## COG: ECs2101 COG4178 # Protein_GI_number: 15831355 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Escherichia coli O157:H7 # 1 552 10 561 561 1054 98.0 0 MLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILGVVKIQVWLNDWNNDFFNALSQKETD KLWQLVLWFPALLGIFVLISVNKTWLIKLLTIRWREWLTDYYLNRWFADKNYYFTQIYGE HKNTDNPDQRIAEDILLLISKTLSLSFGFIQSLSMLITFTVILWQSAGTLSFTVGGTEWS IQGYMVYTVVLIVIGGTLFTHKVGKRIRPLNVEKQRSEATFRTNLVQHNKQAELIALSNA ESLQRQELSENFHTIKENWHRLMNRQRWLDYWQNIYSRSLSVLPYFLLLPQFISGQINLG GLMKSRQAFMLVSNNLSWFIYKYDELAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQV ADASIRTPDNKIILENLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPAD SWYVSQTPLIKTGLLKEIICKALPLSVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSS GEKQRIALARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWN LVDDICDISAVI >gi|296918667|gb|GG773033.1| GENE 509 540072 - 542444 1779 790 aa, chain + ## HITS:1 COG:no KEGG:APECO1_623 NR:ns ## KEGG: APECO1_623 # Name: yddB # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 790 1 790 790 1514 100.0 0 MKRVLIPGVILCGADVAQAVDDKNMYMHVFEEMTVYAPVPVPVNGNTHYTSESIERLPTG NGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPYQNAYLIDGISATNNLNPA NESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFGRFNGGVIDAKIKRFNADDSS VKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYYSPDFKKNFYTLSFNQELADNFGVTA GLSRRQSDITRADYVSNDGIVAGRAQYKNVIDTALSKFTWFASDRFTHDLTLKYTGSSRD YNTSTFPESDREMGNKSYGLAWDMDTQLAWAKLRTTVGWDHISDYTRHDHDIWYTELSCT YGDISGRCTRGGLGHISQAVDNYTFKTRLDWQKFAVGNVSHQPYFGAEYIYSDAWTERHN QSESYVINAAGKKTNHTIYHKGKGSLGIDNYTLYMADRISWRNVSLMPGVRYDYDNYLSN HNISPRFMTEWDIFADQTSMITAGYNRYYGGNILDMGLRDIRNSWTESVSGNKTLTRYQD LKTPYNDELAMGLQQKIGKNVIARANYVYREAHDQISKSSRTDSATKTTITEYNNDGKTK THSFNLSFELAEPLHISQVDINPQIVFSYIKSKGNLSLNNGYEESNTGDNRVVYNGNLVS YDSVPVADFNNPLKISLNMDFTHQPSGLVWANTLTWQEARKARIILGKTNAQYISEYSDY KQYVDEKLDSSLTWDTRLSWTPQFLKQQNLTISADILNVLDSKTAVDTTNTGVATYASGR TFWLDVSMKF >gi|296918667|gb|GG773033.1| GENE 510 542501 - 545284 1744 927 aa, chain + ## HITS:1 COG:pqqL KEGG:ns NR:ns ## COG: pqqL COG0612 # Protein_GI_number: 16129453 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Escherichia coli K12 # 1 927 5 931 931 1677 98.0 0 MRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGLRYMIYPHAQPKDQVNLWLQI HTGSLQEEDNERGVAHFVEHMMFNGTKTWPGNKVIETFESMGLRFGRDVNAYTSYDETVY QVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAERGVITEEWRAHQDAKWRTSQARRP FLLANTRNLDREPIGLMDTVATVTPAQLRQFYQRWYQPNNMTFIVVGDIDSKEALALIKD NLSKLPANKAAENRVWPTKAENHLRFNIINDKENRVNGIALYYRLPMVQVNDEQSFIEQA EWSMLVQLFNQRLQERIQSGELKTISGGTARSVKIAPDYQSLFFRVNARDDNMQDAANAL MAELATIDQHGFSAEELDDVKSTRLTWLKNAVDQQAERDLRMLTSRLASSSLNNTPFLSP EETYQLSKRLWQQITVQSLAEKWQQLRKNQDAFWEQMVNNEVAAKKALSPAAILALEKEY ANKKLAAYIFPGRNLSLTVDADPQAEISSKETLAENLTSLTLSNGARVILAKSAGEEQKL QITAVSNKGDLSFPAQQKSLIALANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMN TLLSVSARTNNPEPGFQLINQRINHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMY ETRYADGRTKLPQENQIAQFTAADALAADRQLFSSPADITFVIVGNVAEDKLVALITRYL GSIKHSDSPLAAGKPLTRATDNASVTVKEQNEPVAQVSQWKRYNSRTPVNLATRMALDAF NVALAKDLRINIREQASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMV KRLAKGISEQELNEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQM TVENVNTAVKQYLSHPVNTYTGVLLPK >gi|296918667|gb|GG773033.1| GENE 511 545645 - 547045 1649 466 aa, chain + ## HITS:1 COG:ECs2098 KEGG:ns NR:ns ## COG: ECs2098 COG0076 # Protein_GI_number: 15831352 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Escherichia coli O157:H7 # 1 466 1 466 466 998 99.0 0 MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNL ATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVG TNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGPVQICWHKFARYWDVELREI PMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDM HIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELV FNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKL GPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVV MRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT >gi|296918667|gb|GG773033.1| GENE 512 547473 - 548237 62 254 aa, chain + ## HITS:1 COG:ECs4396 KEGG:ns NR:ns ## COG: ECs4396 COG2207 # Protein_GI_number: 15833650 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 254 21 274 274 468 93.0 1e-132 MVNGEYRYFNGGDLVFADASQIQVDKCVENFVLVSRDTLSLFLPMLKEEALKLHVHKKVP SLLVHHCTRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDTQFIPLLLNVLQ PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEGTSYSQLLTECRMQRALQ LIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQELPNCGSAASMAAQG IFYGTDRSAEGIRL >gi|296918667|gb|GG773033.1| GENE 513 548606 - 549334 225 242 aa, chain + ## HITS:1 COG:ECs4395 KEGG:ns NR:ns ## COG: ECs4395 COG2207 # Protein_GI_number: 15833649 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 242 1 242 242 445 94.0 1e-125 MAHVCSVILVRRSFDIHHEQQKISLHNESILLLDKNLADDFAFCSLDTRRLDIEELTVCH YLQNIRQLPRNLGLHSKDRLLINQSPPIQLVTAIFDSFNDPRVNSPILSKMLYLSCLSMF SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFSQHSPGT FS >gi|296918667|gb|GG773033.1| GENE 514 549479 - 549760 105 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293412945|ref|ZP_06655613.1| ## NR: gi|293412945|ref|ZP_06655613.1| predicted protein [Escherichia coli B354] hypothetical protein EschWDRAFT_1762 [Escherichia coli W] predicted protein [Escherichia coli B354] hypothetical protein EschWDRAFT_1762 [Escherichia coli W] hypothetical protein EKO11_0225 [Escherichia coli KO11] # 1 84 1 84 93 143 100.0 4e-33 MFGIIKLTIHTITGMWVSIVLFKLMTNGWSGFYFQCCVLSLVFLTVSWLLSGEWLAGKSK AEPSRSTLLSFTRYAFLKRAKRCSTTTKKTGTK >gi|296918667|gb|GG773033.1| GENE 515 549697 - 552810 3249 1037 aa, chain - ## HITS:1 COG:ECs4394 KEGG:ns NR:ns ## COG: ECs4394 COG0841 # Protein_GI_number: 15833648 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 1037 1 1037 1037 1892 99.0 0 MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTITISATYPGADAQTVEDS VTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDIAQVQVQNKLQLAMPSLPE AVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVASNIKDPLSRTAGVGSVQLFGS EYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQLGGMPQAADQQLNASIIVQTRL QTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYSTVARYNGKPAAGIAIKLATGANAL DTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIKISIQEVFKTLVEAIILVFLVMYLFLQ NFRATIIPTIAVPVVILGTFAILSAVGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVI AEDKLPPKEATHKSMGQIQRALVGIAVVLSAVFMPMAFMSGATGEIYRQFSITLISSMLL SVFVAMSLTPALCATILKAAPEGGHKPNALFARFNTLFEKSTQHYTDSTRSLLRCTGRYM VVYLLICAGMAVLFLRTPTSFLPEEDQGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKE KNNVQSVFTVGGFGFSGQGQNNGLAFISLKPWSERVGEENSVTAIIQRAMIALSSINKAV VFPFNLPAVAELGTASGFDMELLDNGNLGHEKLTQARNELLSLAAQSPNQVIGVRPNGLE DTPMFKVNVNAAKAEAMGVALSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRML PDNINQWYVRNASGTMAPLSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMK FMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVM LVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPVE AIIEAARMRLRPILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFV PVFFVVVEHLFARFKKA >gi|296918667|gb|GG773033.1| GENE 516 552835 - 553992 1004 385 aa, chain - ## HITS:1 COG:yhiU KEGG:ns NR:ns ## COG: yhiU COG0845 # Protein_GI_number: 16131385 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 1 385 1 385 385 686 99.0 0 MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPGSVNVLSELPGRTVPYE VAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKALSTASNARI TFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAVEQATINLQYANVTSPITGVS GKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQDFLRMKEEVASGQIKQVQGSTPV QLNLENGKRYGQTGTLKFSDPTVDETTGSVTLRAIFPNPNGDLLPGMYVTALVDEGSRQN VLLVPQEGVTHNAQGKATALILDKDDVVQLREIEASKAIGDQWVVTSGLQAGDRVIVSGL QRIRPGIKARAISSSQENASTESKQ >gi|296918667|gb|GG773033.1| GENE 517 554052 - 554381 59 109 aa, chain + ## HITS:1 COG:no KEGG:ECBD_0228 NR:ns ## KEGG: ECBD_0228 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 92 1 92 92 157 89.0 1e-37 MRDLQTSGIVGLSASKMGCKHSDRHGEVNDKKNVAVLPTVSASMRATKGSTGGYTYQGNK VVFVSPSIITGGIEISICIPRHASHQFQLLMSLLKIRCDTQGDDVAHTS >gi|296918667|gb|GG773033.1| GENE 518 554331 - 554858 391 175 aa, chain - ## HITS:1 COG:ECs4392 KEGG:ns NR:ns ## COG: ECs4392 COG2771 # Protein_GI_number: 15833646 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 175 1 175 175 302 100.0 2e-82 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF >gi|296918667|gb|GG773033.1| GENE 519 555657 - 556229 489 190 aa, chain - ## HITS:1 COG:ECs4391 KEGG:ns NR:ns ## COG: ECs4391 COG3247 # Protein_GI_number: 15833645 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 292 99.0 3e-79 MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFVSGDILSTVVGALLICS GIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPELGIFAIAAFIAGLFCVAGV IRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVSVTLVSTLVGIELIFSAASLF SFASLFVKKQ >gi|296918667|gb|GG773033.1| GENE 520 556484 - 556816 516 110 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3922 NR:ns ## KEGG: ECS88_3922 # Name: hdeA # Def: acid-resistance protein # Organism: E.coli_S88 # Pathway: not_defined # 19 110 19 110 110 156 100.0 3e-37 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL NNKDKPEDAVLDVQGIATVTPAIVQACTQDKKASFKDKVKGEWDKIKKDM >gi|296918667|gb|GG773033.1| GENE 521 556920 - 557258 282 112 aa, chain + ## HITS:1 COG:no KEGG:SSON_3577 NR:ns ## KEGG: SSON_3577 # Name: hdeB # Def: acid-resistance protein # Organism: S.sonnei # Pathway: not_defined # 1 112 1 112 112 216 100.0 2e-55 MGYKMNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWW MLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQASNDLPN >gi|296918667|gb|GG773033.1| GENE 522 557322 - 557969 635 215 aa, chain + ## HITS:1 COG:ECs4388 KEGG:ns NR:ns ## COG: ECs4388 COG1285 # Protein_GI_number: 15833642 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 375 99.0 1e-104 MTAEFIIRLILAVIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLG HVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGI YGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENED HEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS >gi|296918667|gb|GG773033.1| GENE 523 558021 - 558791 227 256 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 225 1 226 245 92 28 4e-17 MISAQNLVYSLQGRRLTDNVSLTFPGGEIVAILGPNGAGKSTLLRQLTGYLQPDSGECRL FNKPLNEWSITELAKHRAVMRQNSHMAFPFSVQEVIQMGRHPHRTGNQDNETAQIMALCD CQALANRNYRQLSGGEQQRVQLARLLVQLWEPTPSPKWLFLDEPTSALDIHHQQHLFRLL RQLVHERQFNVCCVLHDLNLAARYADRVVLMQKGKVIANGKPQDVLTQQALTMLYGADIT VLKDPANHSPLIVLDH >gi|296918667|gb|GG773033.1| GENE 524 558788 - 559780 743 330 aa, chain - ## HITS:1 COG:ZchuU KEGG:ns NR:ns ## COG: ZchuU COG0609 # Protein_GI_number: 15804050 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 EDL933 # 1 330 1 330 330 533 99.0 1e-151 MLKDSLSSARVFMGLSLLLLALVLFGASQGALKISFDALFDEEYRDIWLNIRLPRVLLAV LVGAALATAGVIMQGLFRNPMADPGLLGVSSGSALMVGVAIVLPFSFPVVLVLYEQMVFA IAGSLVVCTIIFLITQRHRDGSMMQLLLAGIAINALCGAAIGILSYIGDEQQLRQLTLWM MGNLGQAQWPTLLVASSFILPAIIATTCLAGTLNLLQLGDEEAHYLGVNVKRKRQQLLLV SSLLVGAAVSVSGIIGFIGLVIPHLIRMTTGANHRWLIPCSALAGACLLLMADTLARTLV QPAEMPVGLLTSLLGGPYFMWLILRNRRIT >gi|296918667|gb|GG773033.1| GENE 525 559829 - 560452 617 207 aa, chain - ## HITS:1 COG:ECs4385 KEGG:ns NR:ns ## COG: ECs4385 COG0702 # Protein_GI_number: 15833639 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 379 99.0 1e-105 MTPWLLFGAGGKGVGARTLELALAEQRPVVAVIRHADAATKLAQQGVQVFTGDACDASVV AAACRATGPDALIISTMGGAQDYLAHRTVIDEAEKAGISRMILVTSLGCGDSWPFLSERA KAAFGQAVREKTLAESWLQTSQLDYAILRPGGLLDGAATGKAQRIQNQECHGFVNRADVA AHIHELANAPALNQQVYSLIEPDLKPA >gi|296918667|gb|GG773033.1| GENE 526 560452 - 560946 450 164 aa, chain - ## HITS:1 COG:ECs4384 KEGG:ns NR:ns ## COG: ECs4384 COG3721 # Protein_GI_number: 15833638 # Func_class: P Inorganic ion transport and metabolism # Function: Putative heme iron utilization protein # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 317 95.0 7e-87 MSHVSLQEFLKTEPDGTLEAIAEQYNTTLLEVVKNLPSPTVVSGDKFDTVWDTVCEWGNV TTLVHTTDVILEFSGELPSGFHRHGYFNLRGKHGMSGHIKAENCTHIALIERKFMGMDTA SILFFNKEGSAMLKIFLGRDDHRQLLSEQVSAFHALAASLKEHA >gi|296918667|gb|GG773033.1| GENE 527 560959 - 562218 1134 419 aa, chain - ## HITS:1 COG:ECs4383 KEGG:ns NR:ns ## COG: ECs4383 COG0635 # Protein_GI_number: 15833637 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 # 1 419 27 445 445 869 98.0 0 MMPFRGAIPVAKEQLAQTWQEMINQTVSPRKRLVYLHIPFCATHCTFCGFYQNRFNEDAC AHYTDALIREIEMEADSVLHQSAPIHAVYFGGGTPSALSAHDLARIITTLREKLPLAPDC EITIEGRVLNFDAERIDACLDAGANRFSIGIQSFNSKIRKKMARTSDGPTAIAFMESLVK RDRAAVVCDLLFGLPGQDAQTWGEDLAIARDIGLDGVDLYALNVLPNTPLGKAVENGRTT VPSPAERRDLYLQGCDFMDDAGWRCISNSHWGRTTRERNLYNLLIKQGADCLAFGSGAGG SINGYSWMNERNLQTWHESVAAGKKPLMMIMRNAERNAQWRHTLQSGIETARVPLDELTP HAEKLAPLLAQWHQKGLSRDASTCLRLTNEGRFWASNILQSLNELIQVLNAPAIALEKP >gi|296918667|gb|GG773033.1| GENE 528 562316 - 563230 828 304 aa, chain - ## HITS:1 COG:ECs4382 KEGG:ns NR:ns ## COG: ECs4382 COG4558 # Protein_GI_number: 15833636 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 304 1 304 304 538 97.0 1e-153 MPRIITRPFLFSPLTLCISAVASAAKTMVKRKKLFTALLALSWTFSVTAAERIVVAGGSL TELIYAMGAGKRVVGVDETTSYPPETAKLPHIGYWKQLSSEGILSLRPDSVITWQDAGPQ IVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVPEQGEALVTQINQRLERVQQN VAAKKAPVKAMFILSAGGSAPQVAGKGSVADAILSLAGAENVATHQQYKSYSAESLIAAN PEVIVVTSQMVDGDINRLRSIAGITHTAAWKNQRIITVDQNLILGMGPRIADVVESLHQQ LWPQ >gi|296918667|gb|GG773033.1| GENE 529 563914 - 565896 1969 660 aa, chain + ## HITS:1 COG:ECs4380 KEGG:ns NR:ns ## COG: ECs4380 COG1629 # Protein_GI_number: 15833634 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 1 660 1 660 660 1244 99.0 0 MSRPQFTSLRLSLLALAVSATLPTFAFATETMTVTATGNARSSFEAPMMVSVIDTSAPEN QTATSATDLLRHVPGITLDGTGRTNGQDVNMRGYDHRGVLVLVDGVRQGTDTGHLNGTFL DPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDLLQEGQSSGFRVFGTGGTGDHSL GLGASAFGRTENLDGIVAWSSRDRGDLRQSNGETAPNDESINNMLAKGTWQIDSAQSLSG LVRYYNNDAREPKNPQTVEASDSSNPMVDRSTIQRDAQLSYKLAPQGNDWLNADAKIYWS EVRINAQNTGSSGEYREQITKGARLENRSTLFADSFASHLLTYGGEYYRQEQHPGGATTG FPQAKIDFSSGWLQDEITLRDLPITLLGGTRYDSYRGSSDGYKDVDADKWSSRAGMTINP TNWLMLFGSYAQAFRAPTMGEMYNDSKHFSIGRFYTNYWVPNPNLRPETNETQEYGFGLR FDDLMLSNDALEFKASYFDTKAKDYISTTVDFAAATTMSYNVPNAKIWGWDVMTKYTTDL FSLDVAYNRTRGKDTDTGEYISSINPDTVTSTLNIPIAHSGFSVGWVGTFADRSTHISSS YSKQPGYGVNDFYVSYQGQQALKGVTTTLVLGNAFDKEYWSPQGIPQDGRNGKIFVSYQW >gi|296918667|gb|GG773033.1| GENE 530 565945 - 566973 738 342 aa, chain + ## HITS:1 COG:ECs4379 KEGG:ns NR:ns ## COG: ECs4379 COG3720 # Protein_GI_number: 15833633 # Func_class: P Inorganic ion transport and metabolism # Function: Putative heme degradation protein # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 675 98.0 0 MNHYTRWLELKEQNPGKYARDIAGLMNISEAELAFARVTHDAWRMRGDIREILAALESVG ETKCICRNEYAVHEQVGSFTNQHLNGHAGLILNPRALDLRLFLNQWASVFHIKENTARGE RQSIQFFDHQGDALLKVYATDNTDMAAWSELLARFITDENTPLELKAVDAPVVQTRADAS VVEQEWRAMTDVHQFFTLLKRHNLTRQQAFNLVADDLACKVSNSALAQILESAQQDGNEI MVFVGNRGCVQIFTGVVEKVVPMKGWLNIFNPTFTLHLLEESIAEAWVTRKPTSDGHVTS LELFAHDGTQIAQLYGQRTEGEQEQAQWRKQIASLIPEGVTA >gi|296918667|gb|GG773033.1| GENE 531 567030 - 567533 367 167 aa, chain - ## HITS:1 COG:ECs4378 KEGG:ns NR:ns ## COG: ECs4378 COG2771 # Protein_GI_number: 15833632 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 167 10 176 176 293 98.0 1e-79 MFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVIIDTLMNNVFHSNFLTQIERLKPVHV IIFSPFNIKRCLGKVPVTFVPRTIAIIDFVALINGSYCSVPEADVSLSRKQHQVLSCIAN QMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELVRHQHINYLV >gi|296918667|gb|GG773033.1| GENE 532 567713 - 568279 601 188 aa, chain - ## HITS:1 COG:ECs4377 KEGG:ns NR:ns ## COG: ECs4377 COG3065 # Protein_GI_number: 15833631 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Starvation-inducible outer membrane lipoprotein # Organism: Escherichia coli O157:H7 # 1 188 12 199 199 381 100.0 1e-106 MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPGLYVGQQARFGGKVI NVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFLDPVNYRNHFVTILGTIQG EQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYGYGAFWPEPGWGAPYYTNAVS QVTPELVK >gi|296918667|gb|GG773033.1| GENE 533 569463 - 569888 551 141 aa, chain - ## HITS:1 COG:arsC KEGG:ns NR:ns ## COG: arsC COG1393 # Protein_GI_number: 16131375 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli K12 # 1 141 1 141 141 263 95.0 5e-71 MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIYYLETPPTRDELVKLIADMGITVRALLR KNVEPYEELGLAEDKFTHDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLEILPDAQ KGAFTKEDGEKVVDEAGNRLK >gi|296918667|gb|GG773033.1| GENE 534 570221 - 570394 80 57 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_3987 NR:ns ## KEGG: ECUMN_3987 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 57 3 59 59 98 100.0 6e-20 MHPLTHPLPVTAHVSLLDDDYLTPARASVNGTTRTSDQDFESVYAHCQSENVSELTG >gi|296918667|gb|GG773033.1| GENE 535 570389 - 570505 92 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHSHSIAWRKRVIDKAIIVLGALIALLELIRFLLQLLN >gi|296918667|gb|GG773033.1| GENE 536 570559 - 571911 500 450 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 5 444 4 442 458 197 31 1e-48 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIR EAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA KTIEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIAV ELAGVINGLGAKTHLFVRKHAPLRSFDPMLSETLVEVMNAEGPQLHTNAIPKAVVKNADG SLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNVEGIYA VGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAR EQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGPEEKIVGIHGIGFGMDEMLQGFA VALKMGATKKDFDNTVAIHPTAAEEFVTMR >gi|296918667|gb|GG773033.1| GENE 537 571983 - 572825 802 280 aa, chain - ## HITS:1 COG:ECs4371 KEGG:ns NR:ns ## COG: ECs4371 COG2961 # Protein_GI_number: 15833625 # Func_class: R General function prediction only # Function: Protein involved in catabolism of external DNA # Organism: Escherichia coli O157:H7 # 1 280 1 280 280 555 99.0 1e-158 MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI AEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE >gi|296918667|gb|GG773033.1| GENE 538 573028 - 575070 2627 680 aa, chain + ## HITS:1 COG:prlC KEGG:ns NR:ns ## COG: prlC COG0339 # Protein_GI_number: 16131370 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Escherichia coli K12 # 1 680 1 680 680 1365 99.0 0 MTNPLLTPFELPPFSKILPEHVVPAVTKALNDCRENVERVVAQGAPYTWENLCQPLAEVD DVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYA TLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKL VTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPSYLPVMTYCDNQALREEMYRAYS TRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFENYAFKSLATKMAENPQQVLDFLTD LAKRARPQGEKELAQLRAFAKAEFGVDELQPWDIAYYSEKQKQHLYSISDEQLRPYFPEN KAVNGLFEVVKRIYGITAKERKDVDVWHPDVRFFELYDENDELRGSFYLDLYARENKRGG AWMDDCVGQMRKADGSLQKPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGLHHMLT RIETAGVSGISGVPWDAVELPSQFMENWCWEPEALAFISGHYETGEPLPKELLDKMLAAK NYQAALFILRQLEFGLFDFRLHAEFRPDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFS HIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIFNRETGQSFLDNILSRGGSEEPMELFK RFRGREPQLDAMLEHYGIKG >gi|296918667|gb|GG773033.1| GENE 539 575221 - 575877 725 218 aa, chain + ## HITS:1 COG:ECs4369 KEGG:ns NR:ns ## COG: ECs4369 COG0500 # Protein_GI_number: 15833623 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 218 33 250 250 417 99.0 1e-117 MALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDV VDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHA SSLTALSDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLAT KRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV >gi|296918667|gb|GG773033.1| GENE 540 575943 - 577412 1657 489 aa, chain - ## HITS:1 COG:yhiP KEGG:ns NR:ns ## COG: yhiP COG3104 # Protein_GI_number: 16131368 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 489 1 489 489 865 99.0 0 MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQLGFSQEQAFVTFGAFA ALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSLLKPDLIFIALGTIAVGNG LFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIALSLAPVIADKFGYSVTYNLCG AGLIIALLVYIACRGMVKDIGSEPDFRPMSFSKLLYVLLGSVVMIFVCAWLMHNVEVANL VLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNV HHEILGFSINPVSFQALNPFWVVLASPILAGIYTHLGNKGKDLSMPMKFTLGMFMCSLGF LTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMW FLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMLLMVPWLK RMIATPESH >gi|296918667|gb|GG773033.1| GENE 541 577729 - 578163 617 144 aa, chain - ## HITS:1 COG:ECs4367 KEGG:ns NR:ns ## COG: ECs4367 COG0589 # Protein_GI_number: 15833621 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 144 1 144 144 271 100.0 3e-73 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK RISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLM SSARQLINTVHVDMLIVPLRDEEE >gi|296918667|gb|GG773033.1| GENE 542 578554 - 578805 104 83 aa, chain + ## HITS:1 COG:no KEGG:G2583_4220 NR:ns ## KEGG: G2583_4220 # Name: uspB # Def: universal stress protein B # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 80 1 80 111 160 98.0 1e-38 MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQV RLVWYIYAPRYRDHHDDEFILAS >gi|296918667|gb|GG773033.1| GENE 543 578865 - 580364 1626 499 aa, chain - ## HITS:1 COG:ECs4365 KEGG:ns NR:ns ## COG: ECs4365 COG0306 # Protein_GI_number: 15833619 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Escherichia coli O157:H7 # 1 499 1 499 499 893 100.0 0 MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVF NFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASS SHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRY WSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLV LIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQ PAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGV SADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTY AQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFT LPAAVLLSGGLYWLSLQFL >gi|296918667|gb|GG773033.1| GENE 544 580596 - 581789 1091 397 aa, chain + ## HITS:1 COG:ECs4364 KEGG:ns NR:ns ## COG: ECs4364 COG2081 # Protein_GI_number: 15833618 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Escherichia coli O157:H7 # 1 396 1 396 400 796 98.0 0 MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPG AYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEK GNVAFRLRSEVLSVAKDDTGFTLELNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQF GLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGIVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQ IPDVSLKQLNVRDQQTLISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVP GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLVAE >gi|296918667|gb|GG773033.1| GENE 545 581876 - 582940 585 354 aa, chain - ## HITS:1 COG:no KEGG:APECO1_2962 NR:ns ## KEGG: APECO1_2962 # Name: yhiM # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 354 1 354 354 615 100.0 1e-175 MGFKMNIYIGWLFKLIPLLMGIICIALGEFVLTGSGQSEYFVAGHVLISLSAICLALFTT AFIIISQLTHGMNKFYNRLFPVIGYAGSATTMIWGWSLLASNNVMADEFVAGHVIFGVGM IAACVSTVAASSGHFLLIPKNASGSKSDGTPLQAYSSTIGNCLIAVPVLLTLFGFIWSVV LLRSADITPHYVAGHVLMGLTAICACLIGLVATIVHQTRNTFSVKEHWLWCYWVILLGSL TIIFGIYVLISSDASARLAPGIILICLGMICYSIFSKVWLLALVWRRTCSLANRIPMIPV FTCLFCLFLAAFLAEIAQTDMAYFIPSRVLVGLGAVCFTLFSIVSILEAGSAKK >gi|296918667|gb|GG773033.1| GENE 546 583662 - 584729 1088 355 aa, chain + ## HITS:1 COG:ZyhiI KEGG:ns NR:ns ## COG: ZyhiI COG0845 # Protein_GI_number: 15804023 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 EDL933 # 1 355 1 355 355 565 99.0 1e-161 MDKSKRHLAWWGVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDT ILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQS LVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAA IEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVL NMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVET SDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ >gi|296918667|gb|GG773033.1| GENE 547 584726 - 587461 2797 911 aa, chain + ## HITS:1 COG:ZyhiH_1 KEGG:ns NR:ns ## COG: ZyhiH_1 COG1131 # Protein_GI_number: 15804022 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Escherichia coli O157:H7 EDL933 # 18 549 1 532 532 1077 98.0 0 MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISG ARVIEQGSVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHD KAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDP LSRAQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWLVAMNAGKVLATGSAEELRQQTQ SATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIP RGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQAFSL YNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDVLPESLPLGIRQRLSLAV AVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLM HAGKVLASGTPPELVEKRGAASLEEAFIAYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSL RRLFSYSRREALELRRDPVRSTLALMGTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQ AWTLNLSGSRYFIEQPPLTSYDELDRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWID GAMPSRAETVKGYVQAMHQSWLQDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPA VIPLLLMMIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLC ALSVFVFGVPHKGSFLTLTLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPTTQ FSGMIDPVASLEGPGRWIGEVYPTSHFLTIARGTFSKALDLTDLWQLFIPLLIAIPLVMG LSILLLKKQEG >gi|296918667|gb|GG773033.1| GENE 548 587461 - 588585 1124 374 aa, chain + ## HITS:1 COG:yhhJ KEGG:ns NR:ns ## COG: yhhJ COG0842 # Protein_GI_number: 16131357 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli K12 # 1 374 2 375 375 667 99.0 0 MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTPGSLNLAPIAIADMDQS QLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVN VDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVM AIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPFEIMMAKVWSMGLVVLVVSGLSL VLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQM LSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFT IALLRFRKTIGTMA >gi|296918667|gb|GG773033.1| GENE 549 588695 - 589546 796 283 aa, chain - ## HITS:1 COG:ECs4355 KEGG:ns NR:ns ## COG: ECs4355 COG0191 # Protein_GI_number: 15833609 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 1 281 1 281 286 555 99.0 1e-158 MPLVNGRILLDRIQEKRVLAGAFNTTNLETTISILNAIERSGLPNFIQIAPTNAQLSGYD YIYEIVKRHADKMDVPVSLHLDHGKTQEDVKQAVRAGFTSVMIDGAAFSFEENIAFTQEA VDFCKSYGVPVEAELGAILGKEDDHVSEADCKTEPEKVKTFVERTGCDMLAVSIGNVHGL DDIPRIDIPLLKRIAEVSPVPLVIHGGSGIAPEILRSFVNYRVAKVNIASDLRKAFITAV GKAYVNNHNEANLARVMASAKNAVEEDVYSKILMMNEGHRLGK >gi|296918667|gb|GG773033.1| GENE 550 589578 - 589847 286 89 aa, chain - ## HITS:1 COG:ECs4354 KEGG:ns NR:ns ## COG: ECs4354 COG1925 # Protein_GI_number: 15833608 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 89 1 89 89 147 96.0 6e-36 MLSKTVEVRNSTGLHARPAACLAKAAKKYSCKVTLHYEGNDINATSMMNIMRAGIKGGKT VEIRCEGDDENEAIQTLTTLFRDRFGEAE >gi|296918667|gb|GG773033.1| GENE 551 589837 - 591345 955 502 aa, chain - ## HITS:1 COG:ECs4353 KEGG:ns NR:ns ## COG: ECs4353 COG1070 # Protein_GI_number: 15833607 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli O157:H7 # 1 502 1 502 502 1022 97.0 0 MPDNSAAIVIDIGTTNCKVTCFSCLDATTLGAHKFVTAKQISPQGNVDFDIDALWQEVRQ AIAQLNAASPLPVRRISIASFGESGVFLDKHGEILTPMLAWYDRRGEEYLATLSEADSAA LYDICGLPLHSNYSAFKMRWLLEHYPLRNRRGLRWLHAPEVLLWRLTGEQRTDITLASRT LCLDVRKGEWSAKAAALLHVPCSAFAPLLQPGEHAGWVSESLCKTLGFSQSVSVTLAGHD HMVGARALQMMPGDILNSTGTTEGILQLDTQPTLDEQAKRDKLANGCYSLANQFTLFASL PVGGFALEWLRNTFRLTDEEIAVSLNRGYADYLAGNWSLDDIPVFIPHLRGSGSPYKNRH TRGLFYGLGDTLNIDMLIASVSLGLTMEFANCFACFNVPGTSALKVIGPATHNPLWLQLK ADILQRPVEAIAFNEAVSVGALLTAAPDIPPPQVTIAQRLLPNRARYHQLQRYQHKWKSW YQLKLQQEGVMPLHHREEHYVE >gi|296918667|gb|GG773033.1| GENE 552 591338 - 592696 1506 452 aa, chain - ## HITS:1 COG:Z4877 KEGG:ns NR:ns ## COG: Z4877 COG3775 # Protein_GI_number: 15804015 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Escherichia coli O157:H7 EDL933 # 1 452 11 462 462 777 99.0 0 MNDIAHTLYNIVQYILGFGPTVMLPLVLFILALFFKVKPAKALRSSLTVGIGFVGIYAIF DILTSNVGPAAQAMVERTGINLPVVDLGWPPLSAITWGSPIAPFVIPLTILINVAMLALN KTRTVDVDMWNYWHFALAGTLVYYSTGSLFFGLLAAAIAAVVVLKLADWSAPLVQKYFGL EGISLPTLSSVVFFPVGLLVDKIIDHIPGLNRIHIDPETVQKKFGIFGEPMMVGTILGIL LGVIAGYDFKKVLLLGISIGGVMFILPRMVRILMEGLLPLSEAIKKYLNAKYPDRDDLYI GLDIAVAVGNPAIISTALLLTPISVFIAFVLPGNEVLPLGDLANLAVMASMIALASRGNI FRTVLAAIPVIIADLWIATKIAPFITGMAKDVNFKFAEGSSGQVSSFLDGGNPFRFWLLE IFNGNLIAIGLVPVIALVLYGIFRMTRSTVYA >gi|296918667|gb|GG773033.1| GENE 553 592773 - 593054 270 93 aa, chain - ## HITS:1 COG:ECs4351 KEGG:ns NR:ns ## COG: ECs4351 COG3414 # Protein_GI_number: 15833605 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Escherichia coli O157:H7 # 1 93 1 93 93 152 98.0 1e-37 MSQTILFVCATGIATSTAVTEKVMEYCKEHGLNVNYSQTNVASLPGNTDGVALVVSTTKV PYELDVPVVNGLPIITGIGEEKVLAQIVSILKK >gi|296918667|gb|GG773033.1| GENE 554 593051 - 593524 348 157 aa, chain - ## HITS:1 COG:ECs4350 KEGG:ns NR:ns ## COG: ECs4350 COG1762 # Protein_GI_number: 15833604 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 276 92.0 1e-74 MQGIQFQENFIQRLPAGLSVEQIIHQLAQPLVTAELVVPDFADHVLEREATYPTGLPTEP PCVAIPHTDHKHVRHNAIAVGILPEPVVFADMGGDSDPVPVRVIFLLALGESNKQLNALG WIMEMIQDTPFMRALLTMETTEIHTAILNKMKERGEI >gi|296918667|gb|GG773033.1| GENE 555 593549 - 594295 642 248 aa, chain - ## HITS:1 COG:ECs4349 KEGG:ns NR:ns ## COG: ECs4349 COG2188 # Protein_GI_number: 15833603 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 248 4 251 251 473 97.0 1e-133 MKSLSKSSQIPLYQQAVEWIRESIYTGDLVEDDRIPSEYQIMDMLEVSRGTVKKAVAQLV KEGVLIQVQGKGTFVKKENVAYPLGEGLLSFAESLESQKIHFTTEVITSRIEPANRYVAE KLRITPGQDILYLERLRSIGDEKAMLIENRINIELCPGIVEIDFNQHNLFPTIESLSQRK IRYSESRYAARLIGNERGHFLDISEDAPVLHLEQLVFFSRGLPVEFGNVWLKGNKYYLGT VLQRREVS >gi|296918667|gb|GG773033.1| GENE 556 594494 - 594895 499 133 aa, chain - ## HITS:1 COG:ECs4348 KEGG:ns NR:ns ## COG: ECs4348 COG0864 # Protein_GI_number: 15833602 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 205 100.0 2e-53 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG VRHGHLQCLPKED >gi|296918667|gb|GG773033.1| GENE 557 594901 - 595707 263 268 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 27 232 16 219 245 105 35 3e-21 MTLLNVSDLSHHYAHGGFSGKHQHQAVLNNVSLALKSGETVALLGRSGCGKSTLARLLVG LESPSQGNISWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREILREPMRHLL SLKKAEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVS NLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQVVGDKL TFSSDAGRVLQNAVLPAFPVRRRTTEKV >gi|296918667|gb|GG773033.1| GENE 558 595704 - 596468 274 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 19 243 38 264 329 110 32 2e-22 MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQT AGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTA AIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARIL DLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSHGKIVEQGDVETLFNAPKHAVTRSL VSAHLALYGMELAS >gi|296918667|gb|GG773033.1| GENE 559 596468 - 597301 1094 277 aa, chain - ## HITS:1 COG:ECs4345 KEGG:ns NR:ns ## COG: ECs4345 COG1173 # Protein_GI_number: 15833599 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 461 99.0 1e-130 MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLG RDIFSRLMAATRVSLGSVMACLLLVLTLGLIIGGSAGLIGGRVDQATMRVADMFMTFPTS ILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVF IDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPL QMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHAH >gi|296918667|gb|GG773033.1| GENE 560 597298 - 598242 257 314 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 68 304 43 310 320 103 26 1e-20 MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNLPPTPEMLASTRTMLGL DQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATLELAGAALVLILLTSVPLG IWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSVYLQWLPAMGYGGWQHIILPA VSIAFMSLAINARLLRASMLGVAGQRHVTWARLRGLSDKQTERRHILRNASLPMITAVGM HIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLMMVVVFVVCNLIVDLLNA ALDPRIRRHEGAHA >gi|296918667|gb|GG773033.1| GENE 561 598242 - 599816 1864 524 aa, chain - ## HITS:1 COG:nikA KEGG:ns NR:ns ## COG: nikA COG0747 # Protein_GI_number: 16131348 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 524 1 524 524 1040 99.0 0 MFSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLYTPNQMFAQSMVYEPLV KYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRH AWLELANQIVDVKALSKNELQITLKSAYYPFLQELALPRPFRFIAPSQFKNHETMNGIKA PIGTGPWVLQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLY GNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALNTAKAPTNELAVREALNYAVNKKSL IDNALYGTQQVADTLFAPSVPYANLGLKPRQYDPQKAKALLEKAGWTLPAGKDIREKNGQ PLRIELSFIGTDALSKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTW GAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRL HDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQIKPVKP >gi|296918667|gb|GG773033.1| GENE 562 599841 - 600017 105 58 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C3992 NR:ns ## KEGG: UTI89_C3992 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 58 1 58 58 102 100.0 4e-21 MAEISMTILSIRHTDYLFWINRWAVGWADQLTESIHCTLSAVSVKGVGVQIARLKFSS >gi|296918667|gb|GG773033.1| GENE 563 599927 - 600514 541 195 aa, chain - ## HITS:1 COG:ECs4342 KEGG:ns NR:ns ## COG: ECs4342 COG2091 # Protein_GI_number: 15833596 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Escherichia coli O157:H7 # 1 195 1 195 195 384 99.0 1e-107 MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHTLSPLPEIIYGEQGKPA FAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWRWLANAVFSLGEHAEMDAV HPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYNSSLSVSHCQLENLSLAICTPTP FTLTADSVQWIDSVN >gi|296918667|gb|GG773033.1| GENE 564 600569 - 601618 904 349 aa, chain - ## HITS:1 COG:yhhT KEGG:ns NR:ns ## COG: yhhT COG0628 # Protein_GI_number: 16131346 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli K12 # 1 349 28 376 376 579 98.0 1e-165 METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQ RPVAITIVVVVMLIALTALVGVLAASFNEFISMLPRFNKELTRKLFKLQEMLPFLNLHMS PERILQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQ IHIAGLHRALKGVSHYLALKTLLSLWTGIIVWLGLELMGVQFALMWAVLAFLLNYVPNIG AVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLL IWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG >gi|296918667|gb|GG773033.1| GENE 565 601750 - 602967 1293 405 aa, chain + ## HITS:1 COG:yhhS KEGG:ns NR:ns ## COG: yhhS COG0477 # Protein_GI_number: 16131345 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 405 15 419 419 663 98.0 0 MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVIS LQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLEYLTAGLTASLPVISLLLLCLG RVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVVFYHWGGLQ ALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLGRVWLYGMALALASAGFGVIATF ITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPNGINRIGGLNVAMICFSVEIIGLLLVGV ATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVPQQNQGAALATYTVFMDLSLGVTGPLA GLVMSWAGVPVIYLAAAGLVAIALLLTWRLKKRPPVEIPEAASSS >gi|296918667|gb|GG773033.1| GENE 566 602971 - 603528 739 185 aa, chain - ## HITS:1 COG:no KEGG:APECO1_2982 NR:ns ## KEGG: APECO1_2982 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 185 15 199 199 323 100.0 2e-87 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADNQQKAQTTAENIIN TLVIQ >gi|296918667|gb|GG773033.1| GENE 567 603601 - 604266 676 221 aa, chain - ## HITS:1 COG:ECs4320 KEGG:ns NR:ns ## COG: ECs4320 COG1738 # Protein_GI_number: 15833574 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 221 1 221 221 371 99.0 1e-103 MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTV RIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYA LGQILDVHVFNRLRQSRHWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIAL VDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS >gi|296918667|gb|GG773033.1| GENE 568 604487 - 604732 262 81 aa, chain + ## HITS:1 COG:ECs4319 KEGG:ns NR:ns ## COG: ECs4319 COG0425 # Protein_GI_number: 15833573 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 81 1 81 81 159 100.0 1e-39 MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFME HELVAKETDGLPYRYLIRKGG >gi|296918667|gb|GG773033.1| GENE 569 605001 - 607199 2338 732 aa, chain - ## HITS:1 COG:zntA KEGG:ns NR:ns ## COG: zntA COG2217 # Protein_GI_number: 16131341 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli K12 # 1 732 1 732 732 1254 98.0 0 MSTPDNHGKKAPQFAAFKPLTTVQNTNDCCCDGACSSTPTLSENVSGTRYSWKVSGMDCA ACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGYSLRDEQASDEP QESRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATTLVGLYPIARQALRLIKSGSY FAIETLMSIAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVSALMALKPETAT RLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGD KVPAGATSVDRLVTLEVLSEPGASAIDRILKLIEEAEERRAPIERFIDRFSRIYTPAIMA VALLVTLVPPLLFAASWQEWIYKGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKG GAALEQLGRVTQVAFDKTGTLTVGKPRVTAIHPATGISESELLTLAAAVEQGATHPLAQA IVREAQVAELAIPTAQSQRALVGSGIEAQVNGERVLICAAGKHPADAFAGLINELESAGQ TVVLVVRNDDVLGVIALQDTLRADAATAISELNALGVKGVILTGDNPRAAAAIAGELGLE FKAGLLPEDKVKAVTELNQHAPLAMVGDGINDAPAMKAAAIGIAMGSGTDVALETADAAL THNHLRGLVQMIELARATHANIRQNITIALGLKGVFLVTTLLGMTGLWLAVLADTGATVL VTANALRLLRRK >gi|296918667|gb|GG773033.1| GENE 570 607273 - 607899 750 208 aa, chain - ## HITS:1 COG:STM3575 KEGG:ns NR:ns ## COG: STM3575 COG3714 # Protein_GI_number: 16766861 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 302 90.0 3e-82 MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLC ASLLGDTLTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAI IWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHY RRRFRADNAIAAACYFAGHFLIVRSLYL >gi|296918667|gb|GG773033.1| GENE 571 608040 - 608399 341 119 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3870 NR:ns ## KEGG: ECS88_3870 # Name: yhhM # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 119 1 119 119 218 100.0 6e-56 MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQ QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ >gi|296918667|gb|GG773033.1| GENE 572 608402 - 608671 339 89 aa, chain - ## HITS:1 COG:yhhL KEGG:ns NR:ns ## COG: yhhL COG3776 # Protein_GI_number: 16131338 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 89 1 89 89 146 98.0 8e-36 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP QMTTAEKVRIFLFGVFELLVWQKKFKVKK >gi|296918667|gb|GG773033.1| GENE 573 608661 - 609257 190 198 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 12 194 13 199 199 77 27 9e-13 MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCF AGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTP HNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAG QVAYRLYQREAQGESDAD >gi|296918667|gb|GG773033.1| GENE 574 609407 - 610903 744 498 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 199 495 21 321 336 291 48 5e-77 MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVQAQEPVKASEHAVEEQPQAHT EAEAETFAANVVEVTEQVAESEKAQPEAEVVAQPESVVEETPEPVAIEREELPLPEDVNA EAVSPEEWQAEAETVEIVEAAEEEAAKEEITDEEPEAQALAAEVAEEAVMVVSPAEEEQP VEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIAD VGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKTPFVILMV GVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGAD SASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTI DASTGQNGVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIED LRPFKADDFIEALFARED >gi|296918667|gb|GG773033.1| GENE 575 610906 - 611574 348 222 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 216 4 220 223 138 36 4e-31 MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIW FSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSA ALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLF EEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGGVGHE >gi|296918667|gb|GG773033.1| GENE 576 611567 - 612625 1075 352 aa, chain + ## HITS:1 COG:ftsX KEGG:ns NR:ns ## COG: ftsX COG2177 # Protein_GI_number: 16131334 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli K12 # 1 352 1 352 352 687 100.0 0 MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKPVNRKTNVFNEQVRYAF HGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAATQYYPSPQITVYLQKTLD DDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGGALDMLEENPLPAVAVVIPKL DFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALTGLVGRVSAMIGVLMVAAVFLVI GNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGGALLGFSGALLSLILSEILVLRLSS AVAEVAQVFGTKFDINGLSFDECLLLLLVCSMIGWVAAWLATVQHLRHFTPE >gi|296918667|gb|GG773033.1| GENE 577 612870 - 613724 1045 284 aa, chain + ## HITS:1 COG:ECs4310 KEGG:ns NR:ns ## COG: ECs4310 COG0568 # Protein_GI_number: 15833564 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 514 100.0 1e-146 MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRF VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM TFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDII RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA >gi|296918667|gb|GG773033.1| GENE 578 613828 - 614712 766 294 aa, chain - ## HITS:1 COG:BH1742 KEGG:ns NR:ns ## COG: BH1742 COG0329 # Protein_GI_number: 15614305 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Bacillus halodurans # 7 273 6 271 295 189 38.0 7e-48 MKELKGIITAMVTPFDETEKMDITAAKKMARWLVDNGVHGLFICGTNGEFHLLSDDEKVE LTKAVVEEVGNEVTICAGAGCCSTKQTIELTKRLVDAGADYISVVTPYYLVPNQEDLYRH YYDIAFSTTAPIILYNLPGQTGLSIEYETANRLADIKNIVAIKDSSGKFEVQKQYLEIAK HKNFKVLNGSDSLMLDAFKEGSVAAVAATSNVLPTIEVDLYNYFMAGEMEKAQEERNKMD ALRMTIKKMTAPAVMKEALNLMGVKAGITRRPIHMPNDAIVEDIKEMLKGYNFL >gi|296918667|gb|GG773033.1| GENE 579 614712 - 615632 459 306 aa, chain - ## HITS:1 COG:MJ1018 KEGG:ns NR:ns ## COG: MJ1018 COG0111 # Protein_GI_number: 15669207 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanococcus jannaschii # 39 306 31 305 524 178 42.0 1e-44 MKKIIITPRPFVGKGKVYIDKLKSAGYQVECNNSGGRYSKEELIEKIKDANAIITGNDPL SREVIDQAKNLKVISKYGVGLDNIDVDYANSKDIVVHKALNANSISVAEMTILMMLSSSR KYVEIESQARNGKDIRLVGYELYQKNLGLIGLGAIGQHVAHIAHSMGMTITAHDPHIDKS KVPSYIELKSPDEIYQYSDVISLHLPLLDSTRNIINDSVFEKMKSSAILINTARGGLVDE KSLYTALSNQKIAFASEDIELRERSKELTELKNYSITPHAASFTDEADHNTMQISIKNVL QELEKE >gi|296918667|gb|GG773033.1| GENE 580 615634 - 616488 457 284 aa, chain - ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 11 284 17 286 286 220 42.0 2e-57 MDNIIESGYSESSPITKRDVQIVWLKWHAFSETSLNFERLQALAFCNAMTGVLAKLYPDE KDLAKALQRHLTMFNTQANWGSVIAGISIALEEKAAQESEEQRESTTQLVTGLKTGLMGP VSGIGDTLDFGTLRPIVIGVCIPFVIQGYVIAALLPLIYQVSYMFFASRFALNIGYKKGK ESILEILHSGSIHRIIEGAGMFGLLMMGALSATYVKIKTPLHITTGGGNTIVLQDMLDKI VPNMLPLIAVLGIYFYIQKCGPHFLRILVTILVLSLAFSFFGLL >gi|296918667|gb|GG773033.1| GENE 581 616481 - 617227 540 248 aa, chain - ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 2 235 3 238 249 202 46.0 5e-52 MSIFTAAMIALVYWISQAKVWYGFSIMRMPLSIAPIMGLIFNDMPTALSVGATLQMIYIG SIAPGGNPPADEGLASCIAIPIALTAGIKPEIAISLAIPLGLLGVVLENVRKTLNTTFIH MADRYAEKGDIKGIQRAATIYPLLLAFPMRFVPVFIACLYGPDAIASFVNLLPAWSTNGL AIAGNILPALGFAITIIVIGKKQYIPLFIIGFFLVTYSGLNTIGISIFGLCAVLLYMQSQ NTKGTKNG >gi|296918667|gb|GG773033.1| GENE 582 617244 - 617729 357 161 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 2 160 3 161 161 130 40.0 7e-31 MSIVHARIDYRLIHGQVITKWLKRSDANKIIVIDDPLSRDPFLAEVYKMAAPSGVEVIMT SIEDTLQRWNSNSFYEGKLLILFKSIDSALKTIQGGLMLEELQVGGVENTPGRKIVFNQI SLNHEDADKLQIIEDKNIKVYFQTIPEEDPASLQKIKNKLP >gi|296918667|gb|GG773033.1| GENE 583 617736 - 618137 211 133 aa, chain - ## HITS:1 COG:SPy0634 KEGG:ns NR:ns ## COG: SPy0634 COG2893 # Protein_GI_number: 15674706 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pyogenes M1 GAS # 6 125 4 124 145 68 33.0 3e-12 MNQFNIIILTHGEAGNALLASSEMIVGKTPHTTAISLMPGMSPEALMQQVKTILNPDVET IIFTDIYGGTPSNIAYLLSREFPIRCISGVNLAMLIEANMLQDSDEEQSFDEYIQHIHDA GKEMIQTYCFNKG >gi|296918667|gb|GG773033.1| GENE 584 619072 - 620175 1330 367 aa, chain + ## HITS:1 COG:ECs4309 KEGG:ns NR:ns ## COG: ECs4309 COG0683 # Protein_GI_number: 15833563 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Escherichia coli O157:H7 # 1 367 20 386 386 706 100.0 0 MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKG GIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI TPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARA VQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAG LKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFV WTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHAN GTATDAK >gi|296918667|gb|GG773033.1| GENE 585 620363 - 620746 322 127 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3856 NR:ns ## KEGG: ECS88_3856 # Name: yhhK # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 127 1 127 127 247 100.0 1e-64 MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARFNERLLAAVRVTLSGTE GALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGVEDRGVMTAFMRALGFTAQ QGGWEKR >gi|296918667|gb|GG773033.1| GENE 586 621170 - 622279 1234 369 aa, chain + ## HITS:1 COG:livK KEGG:ns NR:ns ## COG: livK COG0683 # Protein_GI_number: 16131330 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Escherichia coli K12 # 1 369 1 369 369 702 98.0 0 MKRNAKTIIAGMIALTISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI SPGATNPELTQRGYQYIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPTNQGIVDALKADKKDPSGPYV WITYAAVQSLATALERTGSDEPLALVKDLEANGANTVIGPLNWDEKGDLKGFDFGVFQWH ADGSSTAAK >gi|296918667|gb|GG773033.1| GENE 587 622327 - 623253 1281 308 aa, chain + ## HITS:1 COG:ECs4304 KEGG:ns NR:ns ## COG: ECs4304 COG0559 # Protein_GI_number: 15833558 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Escherichia coli O157:H7 # 1 308 1 308 308 488 99.0 1e-138 MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAA LMMLGIDTGWLLVVAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQN YVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRM GRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGM KAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGIL GRPEVEKV >gi|296918667|gb|GG773033.1| GENE 588 623250 - 624527 1470 425 aa, chain + ## HITS:1 COG:livM KEGG:ns NR:ns ## COG: livM COG4177 # Protein_GI_number: 16131328 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 425 1 425 425 717 99.0 0 MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDIRWQWVFIGTAVVFFFQL LRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVAWPFMVSRGTVDIATLTMI YIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPIAGLMAAAAGF LLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAR EGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIA CRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMG SQFAVILAAVLLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNGAA KGEQA >gi|296918667|gb|GG773033.1| GENE 589 624524 - 625291 258 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 245 1 230 245 103 25 1e-20 MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGG TILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKT PSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEP AAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQ IRNNPDVIRAYLGEA >gi|296918667|gb|GG773033.1| GENE 590 625293 - 626006 268 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 216 1 218 245 107 29 8e-22 MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSG RIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWV YELFPRLHERRVQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTI EQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLGG >gi|296918667|gb|GG773033.1| GENE 591 626403 - 627719 1580 438 aa, chain + ## HITS:1 COG:ECs4299 KEGG:ns NR:ns ## COG: ECs4299 COG1653 # Protein_GI_number: 15833553 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 438 1 438 438 838 99.0 0 MKPLRYTASALALGLALMANAQAVTTIPFWHSMEGELGKEVDSLAQRFNAENPDYKIVPT YKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIKPVYDVFKEAGIQFDESQF VPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLK ASGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEM NKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLANIREYAKFNYGVGMMPYDADAKDAP QNAIIGGASLWVMQGKDKETYTGVAKFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQ GFYEKNPGADIATRQMLNKPPLPFTKGLRLGNMPQIRVIVDEELESVWTGKKTPQQALDT AVERGNQLLRRFEKSTKS >gi|296918667|gb|GG773033.1| GENE 592 627817 - 628254 436 145 aa, chain + ## HITS:1 COG:ugpA KEGG:ns NR:ns ## COG: ugpA COG1175 # Protein_GI_number: 16131324 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 1 127 1 127 295 207 99.0 4e-54 MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFV TLFHDSYYLDAFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPA VAAVLWIPPPRGAPRRCRRIVDLSV >gi|296918667|gb|GG773033.1| GENE 593 628160 - 628750 454 196 aa, chain + ## HITS:1 COG:ugpA KEGG:ns NR:ns ## COG: ugpA COG1175 # Protein_GI_number: 16131324 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 26 196 125 295 295 303 100.0 2e-82 MPWLPPLPPYCGSPPPAGPPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMF LVVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLL VVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIV LTVVQFRYVESKVRYQ >gi|296918667|gb|GG773033.1| GENE 594 628747 - 629592 918 281 aa, chain + ## HITS:1 COG:ECs4297 KEGG:ns NR:ns ## COG: ECs4297 COG0395 # Protein_GI_number: 15833551 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Escherichia coli O157:H7 # 1 281 1 281 281 483 99.0 1e-136 MIENRPWLTIFSHTMLILGIAVILFPLYVAFVAATLDKQEVYAAPMTLIPGTHLLENIHN IWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAIVWFRFPLRNLFFWMIFIT LMLPVEVRIFPTVEVIANLKMLDSYAGLTLPLMASATATFLFRQFFMTLPDELVEAARID GASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWPLLIITDVDLGTTVAGIKGMIAT GEGTTEWNSVMAAMLLTLIPPVVIVLVMQRAFVRGLVDSEK >gi|296918667|gb|GG773033.1| GENE 595 629594 - 630664 1379 356 aa, chain + ## HITS:1 COG:ECs4296 KEGG:ns NR:ns ## COG: ECs4296 COG3839 # Protein_GI_number: 15833550 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 356 14 369 369 681 97.0 0 MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTTGD IWIDRKRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAAR ILELDGLLKRRPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLELQQL HRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAM NLLAGRVNNEGTHFELDGGITLPLNGGYRQYAGRKMTLGIRPEHIALSSQAEGGVPLVMD TLEILGADNLAHGRWGEQKLVVRLAHQERPTAGSTLWLHLPENQLHLFDGETGQRV >gi|296918667|gb|GG773033.1| GENE 596 630661 - 631404 769 247 aa, chain + ## HITS:1 COG:ECs4295 KEGG:ns NR:ns ## COG: ECs4295 COG0584 # Protein_GI_number: 15833549 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 498 98.0 1e-141 MSNWPYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLER TSNGWGVAGELNWQDLLRVDAGSWYSKAFKGEPLPLLSQVAERCREHGMMANIEIKPTTG TGPLTGKTVALAARELWTGMTPPLLSSFEIDALEAAQQAAPELPRGLLLDEWRDDWRELT ARLGCVSIHLNHKLLDKARVMQLKDAGLRILVYTVNKPQRAAELLRWGVDCICTDAIDVI GPNFTAQ >gi|296918667|gb|GG773033.1| GENE 597 631391 - 631831 337 146 aa, chain - ## HITS:1 COG:no KEGG:ECDH10B_3622 NR:ns ## KEGG: ECDH10B_3622 # Name: yhhA # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 146 1 146 146 156 99.0 2e-37 MKRLLLLTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQTQQIQQKGMLNQQLKT QTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGGMLNSNRNPDSSLNQQHML PERRNGDMLNQPSTPQPDIPLKTIGP >gi|296918667|gb|GG773033.1| GENE 598 631951 - 633684 1815 577 aa, chain + ## HITS:1 COG:ECs4293 KEGG:ns NR:ns ## COG: ECs4293 COG0405 # Protein_GI_number: 15833547 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Escherichia coli O157:H7 # 1 577 1 581 581 1095 97.0 0 MIKPTFLRRVAIAALLTGSCFSTVAAPPVSYGVEEDVFHPVRAKQGMVASVDATATQVGV DILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSKNGNTTAIDFREMAPAKATR DMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIV NDALADDLKTYGSEVLPNHENSKAIFWKEGEPQKKGDKLVQANLAKSLEMIAENGPDEFY KGTIAEQIAQEMQKNGGLISKEDLAAYKAVERTPISGDYRGYQVYSMPPPSSGGIHIVQI LNILENFDMQKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVPWQALTNKAYAKSI ADQIDINKAKPSSEIRPGKLAPYESNQTTHYSVVDKDGNAVAVTYTLNTTFGTGIVAGES GILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVVKDGKTWLVTGSPG GSRIITTVLQMVVNSIDYGMNVAEATNAPRFHHQWLPDELRVEKGFSPDTIKLLEAKGQK VALKEAMGSTQSIMIGPDGELYGASDPRSVDDLTAGY >gi|296918667|gb|GG773033.1| GENE 599 633722 - 634006 243 94 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3843 NR:ns ## KEGG: ECS88_3843 # Name: yrhB # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 94 1 94 94 192 100.0 3e-48 MITYHDAFAKANNYLDDANLPVVITLHGRFSQGWYFCFEAREFLETGDEAARLAGNAPFI VDKGSGEIHSLGTAKPLEEYLQDYEIKKATFGLP >gi|296918667|gb|GG773033.1| GENE 600 634456 - 634911 196 151 aa, chain - ## HITS:1 COG:no KEGG:APECO1_3014 NR:ns ## KEGG: APECO1_3014 # Name: yrhA # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 151 14 164 164 242 100.0 4e-63 MNDLDYPFEAPLKESFIESIIQIKFNSNSTNCLEKLCNEVSILFNNQPDYLTFLRAMDGF EVNGLRLFSLSIPEPSVKNLFAVNEFYRDNDDFINPDLQERLVIGNDSISIFTYDIKSNF FEIRDNIGTENIFSSFSDFSSFLNEIMDSCS >gi|296918667|gb|GG773033.1| GENE 601 634947 - 635192 67 81 aa, chain - ## HITS:1 COG:no KEGG:c4233 NR:ns ## KEGG: c4233 # Name: yhhZ # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 81 312 392 392 171 100.0 7e-42 MRKGNVPLNYNVHHKLSLDDGGTNDLENLVLIENEPYHKVFTNMQSRIAKGILVGESKIT PWAIPSGSIYPPMKNIMEPTK >gi|296918667|gb|GG773033.1| GENE 602 635325 - 636125 190 266 aa, chain - ## HITS:1 COG:yhhZ_1 KEGG:ns NR:ns ## COG: yhhZ_1 COG3157 # Protein_GI_number: 16131314 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli K12 # 1 169 1 169 170 311 94.0 8e-85 MSNIVYLTVTGEQQGSISAGCGTTESIGNRWQSGHEDEIFTFSLLNSITNTGLGSQFHGI TFCKLIDKSTPLFINSINNNEQLFMEFDFYRINRFGRWEKYYYIQLRGAFLSAIHHQIFE NQLDTETITVSYEFILCQHLITNTEFSYLALPENYNRLFLPNSKNKTNNGLKTLNSEAVG RLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEKTAGIAIATASILLTKRSNVDTY TEINSYLGKLRGQQKLLDSIDIIEII >gi|296918667|gb|GG773033.1| GENE 603 636361 - 636849 356 162 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase [Sphaerobacter thermophilus DSM 20745] # 1 162 1 163 179 141 47 5e-32 MSEIVIRHAETRDHEAIRQIHAQPEVYYNTLQVPHPSEQMWLERLTARPGIKQLVACIDG IVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMREMIDMCDNWLRVDRIELTV FVDNAPAIKVYKKFGFEIEGTGKKYALRNGEYVDAYYMARVK >gi|296918667|gb|GG773033.1| GENE 604 637078 - 637281 184 67 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3838 NR:ns ## KEGG: ECS88_3838 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 67 20 86 86 135 100.0 4e-31 MRDMPAILAVKYIRQMVTGGAFAEANKGAVNDHDFVLFKVVIYTLAQSGRGSYWSAHNEH KHFPRIN >gi|296918667|gb|GG773033.1| GENE 605 637183 - 638220 1156 345 aa, chain + ## HITS:1 COG:yhhX KEGG:ns NR:ns ## COG: yhhX COG0673 # Protein_GI_number: 16131312 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 345 1 345 345 694 98.0 0 MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEV LNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTIAQAKELFALAKSKGLIVT PYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVAETKPGLPQDGAFYGLGVHTM DQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHG KKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGVLEYVNDEGVTVREEMKPEMGDYGR VYDALYQTITNGAPNYVKESEVLTNLEILERGFEQSSPSAVTLAR >gi|296918667|gb|GG773033.1| GENE 606 638343 - 639038 888 231 aa, chain + ## HITS:1 COG:yhhW KEGG:ns NR:ns ## COG: yhhW COG1741 # Protein_GI_number: 16131311 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Escherichia coli K12 # 1 231 1 231 231 469 99.0 1e-132 MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVINDDVIEAGQGFGTHPHK DMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIM PEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDMELYRWALVKDEQSVHQIAAE RRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHADSDSEILLFDLPPV >gi|296918667|gb|GG773033.1| GENE 607 639131 - 640126 897 331 aa, chain + ## HITS:1 COG:ECs4287 KEGG:ns NR:ns ## COG: ECs4287 COG1609 # Protein_GI_number: 15833541 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 650 99.0 0 MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSN ATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNI DGLILTERTHTPRTLKMIEVAGIPVVELMDSKSPCLDIAVGFDNFEAARQMTTAIIARGH RHIAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVEQSSSYSSGIELIRQARREYPQL DGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSI GAERLLARIRGESVIPKMLDLGFTLSPGGSI >gi|296918667|gb|GG773033.1| GENE 608 640304 - 640792 540 162 aa, chain + ## HITS:1 COG:ECs4286 KEGG:ns NR:ns ## COG: ECs4286 COG3265 # Protein_GI_number: 15833540 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 323 99.0 1e-88 MGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRCNIEKMASGEPLNDDDRKPWLQALNDAA FAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQM LVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIEVIKKGK >gi|296918667|gb|GG773033.1| GENE 609 640859 - 642136 1616 425 aa, chain + ## HITS:1 COG:STM3541 KEGG:ns NR:ns ## COG: STM3541 COG2610 # Protein_GI_number: 16766827 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Salmonella typhimurium LT2 # 1 425 22 446 446 673 97.0 0 MKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLGFLAVVVALGAMFGKILHE TGAVDQIAVKMLKSFGHSRVHYAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLV KLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFI SRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFE FIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLV DSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGA QMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIA FQLLS >gi|296918667|gb|GG773033.1| GENE 610 642193 - 642786 613 197 aa, chain - ## HITS:1 COG:ECs4279 KEGG:ns NR:ns ## COG: ECs4279 COG2095 # Protein_GI_number: 15833533 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 293 99.0 2e-79 MNEIISATVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVRELLIALLVMLVFLFAGEK ILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAGEEPFIVPLAIPLVAGPTI LATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFLRLLGEKGVNALERLMGLILV MMATQMFLDGIRMWMKG >gi|296918667|gb|GG773033.1| GENE 611 642978 - 644081 1166 367 aa, chain + ## HITS:1 COG:ECs4278 KEGG:ns NR:ns ## COG: ECs4278 COG0136 # Protein_GI_number: 15833532 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 744 99.0 0 MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL EALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVIT DGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMG HLYGHVADELANPSSAILDIERKVTTLTRSGELPVDNFGVPLAGSLIPWIDKQLDNGQSR EEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEELLAAHNP WAKVVPNDREITMRELTPAAVTGTLTTPVGRLRKLNMGPEFLSAFTVGDQLLWGAAEPLR RMLRQLA >gi|296918667|gb|GG773033.1| GENE 612 644354 - 646540 2663 728 aa, chain + ## HITS:1 COG:ECs4277 KEGG:ns NR:ns ## COG: ECs4277 COG0296 # Protein_GI_number: 15833531 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Escherichia coli O157:H7 # 1 728 1 728 728 1499 99.0 0 MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDATDVWVIEPKTGRKLAKL ECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFGPLIQEMDAWLLSEGTHLR PYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIP GAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETASLICGLPEKVVQTEERKKANQFD APISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGY QPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHS DPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEG EWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYK WNLGWMHDTLDYMKLDPIYRQYHHDKLTFGMLYNYTENFVLPLSHDEVVHGKKSILDRMP GDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQ RLVRDLNHTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPV PRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGAVHSDEIASHGRQHSLSLTLPPLAT IWLVREAE >gi|296918667|gb|GG773033.1| GENE 613 646537 - 648510 1396 657 aa, chain + ## HITS:1 COG:glgX KEGG:ns NR:ns ## COG: glgX COG1523 # Protein_GI_number: 16131305 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Escherichia coli K12 # 1 657 1 657 657 1372 98.0 0 MTQLAIGKPTPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQEHRYDLPGHSGDIWHGY LPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYR DNASIAPKCVVVVDHYDWEDDAPPRMPWGCTIIYEAHVKGLTYLHPEIPVEIRGTYKALG HPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETA LDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWT GCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNC PVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAA SSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKE GLGGTLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQRGNNNAYCQDNQLTWLDW SQASSGLTAFTAALIHLRKRIPALMENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQ ILLSDRFLIAINATLEVTEIVLPAGEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR >gi|296918667|gb|GG773033.1| GENE 614 648528 - 649823 1184 431 aa, chain + ## HITS:1 COG:ECs4275 KEGG:ns NR:ns ## COG: ECs4275 COG0448 # Protein_GI_number: 15833529 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 431 1 431 431 909 99.0 0 MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSN CINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLLPAQQRMKGENWYRGTADA VTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGV MAVDENDKIIEFVEKPANPPSMPNDPGKSLASMGIYVFDADYLYELLEEDDRDENSSHDF GKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMY DRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFC NIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENAEEDARRFYRSEEGIVLVTRE MLRKLGHKQER >gi|296918667|gb|GG773033.1| GENE 615 649823 - 651256 1254 477 aa, chain + ## HITS:1 COG:ECs4274 KEGG:ns NR:ns ## COG: ECs4274 COG0297 # Protein_GI_number: 15833528 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 976 100.0 0 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRR DTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEM ASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLP WSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGR LSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSR LTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFS HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASG FVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK >gi|296918667|gb|GG773033.1| GENE 616 651275 - 653722 2814 815 aa, chain + ## HITS:1 COG:glgP KEGG:ns NR:ns ## COG: glgP COG0058 # Protein_GI_number: 16131302 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Escherichia coli K12 # 1 815 1 815 815 1655 99.0 0 MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNATLFAVRDRLVERWLRS NRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGALEAMGLNLEELIDEENDPG LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGSQKESPDYWLEYGNPWE FKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQIIPGYDTDATNTLRLWSAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSSTIQDILSR HYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRLLIDEHQFSWDDAFEVCCQVFSYTNHT LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDESNGRR VRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFTNVTNGVTPRRWLAVANPS LSAVLDEHLGRNWRTDLSLLNDLQQHCDFPMVNHAVHQAKLENKKRLAEYIAQQLNVVVN PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKH IIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSN MKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEEL HQVLTQIGSGVFSPEDPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYERQEEW TAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVRL >gi|296918667|gb|GG773033.1| GENE 617 654216 - 654920 544 234 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3825 NR:ns ## KEGG: ECS88_3825 # Name: aufA # Def: Auf fimbriae major fimbrial subunit AufA # Organism: E.coli_S88 # Pathway: not_defined # 1 234 1 234 234 375 100.0 1e-102 MKFNLSNLSAVLLASGMLMSTAVTAAPGDATQFGGADTDWSTVDYPRLTDMDDNVDSMGG KIRFTGRVVKATCKVATDSKQIEVVLPVVPSNLFTGIDVEAQGASNQTDFNINLTECSNT DDQKIEFRFTGTADSANKTLANEVEGSTDADNSGNAGATGVGIRIYSKGTTNNGLINLNT TAAEGSASTAAYTIPGNATTHDFSAAFTAGYAQNGSTVAPGVVKSTASFVVLYE >gi|296918667|gb|GG773033.1| GENE 618 654994 - 655773 378 259 aa, chain + ## HITS:1 COG:ECs2112 KEGG:ns NR:ns ## COG: ECs2112 COG3121 # Protein_GI_number: 15831366 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 # 38 259 16 236 236 208 46.0 1e-53 MLFHQQGCCMKCIIGNKKWVCGFRDELKVSQNIIRSGILFLLSILFINNASAGGFGLGVT RLIYPAESKQITLSVQNSGDNTSYLIQSWVDDSKTEKKSQDFVITPPLFMLPTRKEASLR IMFLGKTNLPTDRETLYWMNVKAIPPTDEKNTQKNTLQLALQNKIKLFYRPENLPVQPGK ARNMLRFKYEGKQLKVINPSPYYLTLTGIKVQGSKLPNMFVPPKSDITVSSPVTLAGEIT YQTINDFGATTERQKGIMQ >gi|296918667|gb|GG773033.1| GENE 619 655843 - 658404 826 853 aa, chain + ## HITS:1 COG:ycbS KEGG:ns NR:ns ## COG: ycbS COG3188 # Protein_GI_number: 16128907 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 28 853 39 866 866 759 48.0 0 MAAQKQMKRVVPLLLVIMPACSIAGMRFNPAFLSGDTEAVADLSRFEKGMTYLPGSYEVE VWVNDSPLLSRTVTFKADDANQLIPCLSLADLLSLGINKNALPEQALASSENSCLDLRIW FPDVHYMPELDAQRLKLTFPQAIIKRDARGYIPPEQWDNGITAFLLNYDFSGNNDRGDYS SNNYYLNLRAGINIGAWRFRDYSTWSRGSNSAGKLEHISSTLQRVIIPFRSELTLGDTWS SSDVFDSVSIRGIKLESDENMLPDSQSGFAPTVRGIAKSRAQVTIKQNGYVIYQTYMPPG PFEISDLNPTSSAGDLEVTIKESDNSETVYTVPYAAVPILQREGHSKYSTTVGQYRSNSY NQKSPYIFQGELIWGLPWDITAYGGAQFSEDYRALALGLGLNLGVFGATSFDVTQANSSL VDGSKHQGQSYRFLYSKSLVQTGTAFHIIGYRYSTQGFYTLSDTTYQQMSGTVVDPKTLD DKDYVYNWNDFYNLRYSKRGKFQASVSQPFGNYGSMYLSASQQTYWNTDKKDSLYQVGYN TSIKGIYLNVAWNYSKSPGTNADKIVSLNVSLPISNWLSSTNDGRSSSNAMTATYGYSQD NHGQVNQYTGVSGSLLEQHNLSYNIQHGFANQDNSSSGSVGVNYRGAYGSLNSAYSYDNE GNQQINYGISGALVVHENGLTLSQPLGETNVLIKAPGANNVDVQRGTGISTDWRGYAVVP YATEYRRNNISLDPMSMNMHTELDITSTEVIPGKGALVRAEFAAHIGIRGLFTVRYRNKS VPFGATASAQIKNSSQITGIVGDNGQLYLSGLPLEGVINIQWGDGVQQKCQANYKLPETE LDNPVSYATLECR >gi|296918667|gb|GG773033.1| GENE 620 658404 - 658967 313 187 aa, chain + ## HITS:1 COG:STM0025 KEGG:ns NR:ns ## COG: STM0025 COG3539 # Protein_GI_number: 16763415 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 34 187 32 181 181 84 33.0 1e-16 MNLIFSKYSVFFILFAFFAFPLSGQANDSVVVTFTGILLAKSCDITTGSKDQSVKMGTYD ANEFLNVGDVSPSQTFTINVQGCPTAKSTVYSSGVSANVRFTGDADAINSALLRLSAGAD SATGLGIEILDNNDVAIAINGESGFRDLVLNENGDANLTFKLRYKSTQENVHAGQANALL YFDIDYQ >gi|296918667|gb|GG773033.1| GENE 621 658918 - 659490 63 190 aa, chain + ## HITS:1 COG:ECs1027 KEGG:ns NR:ns ## COG: ECs1027 COG3539 # Protein_GI_number: 15830281 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 10 190 7 187 187 80 32.0 2e-15 MPGKQMLCCILISIISEGDMKIFISLFLFIISTNSFADDITHAGVVRIEGLITEKTCIIS DESKNFTVNMPDVPSSSVRSAGDVTEKVYFSITLTRCGSDVGNAYIKFTGNTVSEDASLY KLEDGSVEGLALTIFDKNKGSISNDVKSMGFSLTSSVDNILHFFAAYKALKNNVQPGDAN ASVSFIVTYD >gi|296918667|gb|GG773033.1| GENE 622 659435 - 660235 151 266 aa, chain + ## HITS:1 COG:STM0027 KEGG:ns NR:ns ## COG: STM0027 COG3121 # Protein_GI_number: 16763417 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 27 251 24 239 243 149 37.0 7e-36 MSNQGMQMRQYRLLSPMIKVVIVLFSLLFSTAQAGLVIGGTRFAYPENQSSISVELKNTS DRDMLVKVAVSPDDARQLTGTVESLPSYSETVFIATPPLFVLKPDKNTKIRINRVGGSLS ADRESLFILNVAALPTLENSHSVKTDNQLQIAVRNRMKIFYRPSNLSEDPNMSYQKLRWA RKNEIVTVYNPGPRYVTLYNLHVDGKVIDGGMVAPFSHRQQSWCKSQGVCEIAWQTLDVY NNVLPAWKVKMNLLQMDVSGLQVKTD >gi|296918667|gb|GG773033.1| GENE 623 660250 - 661371 180 373 aa, chain + ## HITS:1 COG:STM0547 KEGG:ns NR:ns ## COG: STM0547 COG3539 # Protein_GI_number: 16763927 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 43 372 28 334 335 87 27.0 5e-17 MITYTGYKLKVIFIIFLFLGYHVVAYAEMGRDREFCYPGSPENNTTPAVFYYNFGTTIIS DINNNIPGTILPEKNWKIGLYKAYCNSISNYEVYFSGVSGIDPSGTSGIQQGSDIFVPVT HEISISTHVKLYNKNGTQTDKTVPFYNYSTNYPTDRSKPSNWSSGTEGYIKIKLDKKIIS DISLNNVLLVSLYASQRQTEHGPVPLFNAWISNLDIQVPQGCTINEGTSFTVNMPDVWAS ELSRAGAGAKPAGVTPVATTIPINCTNKDTDAVMTLVFDGNISATRDTNGKQSIIQAQDN PDVGIMIMDSQQNSVDLNALATSVGVPFRLVENQTASAQTADVTFLTLPVSTTGKVPAAG RYNALAILRVEYQ >gi|296918667|gb|GG773033.1| GENE 624 661544 - 662254 282 236 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3818 NR:ns ## KEGG: ECS88_3818 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 236 1 236 236 491 100.0 1e-138 MELVDTLFANFSGTDPFTGVDITIAHCKSTYWDEGIVQQLINQVLDEGEKFAGAAGLEGL SRYDVTLNIGLTSSNVWPGFSLDTATISRLCACGADFGFALYISDVPDVQCDLNTTNDFT VQFTAMLNPDERVIIAKRPLKKCDAWIEDVYIFQVFKEAWQFQNDNSLRGFRDKQAELKL YARHYSVENCTEESCWDCNYCIRPSFSLSRSAIIRLNAANARFVYQPFTRDQRARG >gi|296918667|gb|GG773033.1| GENE 625 662257 - 663024 414 255 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3817 NR:ns ## KEGG: ECS88_3817 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 255 1 255 255 507 100.0 1e-142 MPPTPAMQALIEQIYHIFRRYPAPKQFVVCCEYCLSQQEQKALRNTSLRAIPYSLINAWN SSPGPDPQNSDEVRYFLPRLLEFVAQGQFDNIHEVFSLRRINLASKENWREDEREILQQF ACQYMTDWVSGDEAVELQYKLEMFFRADIALSPLLDAIISVPGFWSAASLACLLNTYRDG YIRDNQDDIDKAITAQINAWAFNNQSILKERARQAIENPLKQPEQGTQYQIWEDDWMIDE CLCAMYDASSESPGK >gi|296918667|gb|GG773033.1| GENE 626 663027 - 663632 141 201 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3570 NR:ns ## KEGG: ECIAI1_3570 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 201 1 201 201 332 95.0 8e-90 MIKFRLYIPPVILGFVIVPLLVWPTVIALAVLIFTLTFLAEIIFSFPLLVVRISLQELQL ELLVEYALFFSVMGGIGWQFSRRTPPELKNRLHCWLVFSPVYFWLILSNFILYISPEKSA LLENIRNFFLTFVWLPLNFSPFWPQPWTDFVGPISAQLGFALGYYCQWRSKNRSHRKKWG DWVTCLSLAILALGPLFNYLQ >gi|296918667|gb|GG773033.1| GENE 627 663686 - 665191 1679 501 aa, chain - ## HITS:1 COG:glpD KEGG:ns NR:ns ## COG: glpD COG0578 # Protein_GI_number: 16131300 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli K12 # 1 501 1 501 501 979 98.0 0 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYE FRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGS TGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG LWIVEAEDIDTGKKYTWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVH TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLKVYNTHF KKQLSRDDIIWTYSGVRPLCDDESDSPQAITRDYTLDIHDEDGKAPLLSVFGGKLTTYRK LAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPFLTESLARHYART YGSNSELLLGNAGAISDLGENFGHEFYEAELKYLVDHEWVRRADDALWRRTKQGMWLNAD QQSRVSQWLMEYTQQRLSLAS >gi|296918667|gb|GG773033.1| GENE 628 665381 - 665707 479 108 aa, chain + ## HITS:1 COG:glpE KEGG:ns NR:ns ## COG: glpE COG0607 # Protein_GI_number: 16131299 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 108 1 108 108 211 99.0 3e-55 MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHATQAFHLTNDTLGAFMRDNDFDTP VMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEVAYGA >gi|296918667|gb|GG773033.1| GENE 629 665752 - 666582 844 276 aa, chain + ## HITS:1 COG:glpG KEGG:ns NR:ns ## COG: glpG COG0705 # Protein_GI_number: 16131298 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Escherichia coli K12 # 1 276 1 276 276 518 99.0 1e-147 MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQAERVRAELARFLENPA DPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVMMIACVVVFIAMQILGDQEVM LWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLI SALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAG WFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK >gi|296918667|gb|GG773033.1| GENE 630 666599 - 667357 859 252 aa, chain + ## HITS:1 COG:ECs4266 KEGG:ns NR:ns ## COG: ECs4266 COG1349 # Protein_GI_number: 15833520 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 483 98.0 1e-136 MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLILRHHGGAALPS SSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTTPEAVAHALLNHSNLRIVT NNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSDGS LLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDTMPPASVMQ VLKDHHIQLELC >gi|296918667|gb|GG773033.1| GENE 631 667339 - 668937 1241 532 aa, chain - ## HITS:1 COG:rtcR KEGG:ns NR:ns ## COG: rtcR COG4650 # Protein_GI_number: 16131296 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli K12 # 1 532 1 532 532 1025 97.0 0 MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRLELLHDARSRSLFETLK RDIASVSPETEVVGVEIELHNPWDFEEVYACLHDFARGYAFQADKEDYLIHITTGTHVAQ ICWFLLAEARYLPARLIQSSPPRKKERPDSPGAVTIIDLDLSRYNAIASRFAEERQQTLD FLKSGIATRNSHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSG AFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQA MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPG LRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVT RMATFATSGRITLDTVEDEINRLRYNWQESRPSTLTALLGAEAENIDLFDRMQLEHVIAI CRQAKSLSAAGRELFDISRQGKASVNDADRLRKYLARFGLTWEAMQDQHSSS >gi|296918667|gb|GG773033.1| GENE 632 669126 - 670352 1357 408 aa, chain + ## HITS:1 COG:rtcB KEGG:ns NR:ns ## COG: rtcB COG1690 # Protein_GI_number: 16131295 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 408 1 408 408 848 99.0 0 MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSV IPTKGAIIPAAVGVDIGCGMNALRTALTAADLPENLAELRQAIETAVPHGRTTGRCKRDK GAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQV WIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQ LFASLNRDAMMENVVTALQSVTQKTVKQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKG AVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRA TAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG >gi|296918667|gb|GG773033.1| GENE 633 670356 - 671372 871 338 aa, chain + ## HITS:1 COG:ECs4263 KEGG:ns NR:ns ## COG: ECs4263 COG0430 # Protein_GI_number: 15833517 # Func_class: A RNA processing and modification # Function: RNA 3'-terminal phosphate cyclase # Organism: Escherichia coli O157:H7 # 1 337 2 338 343 614 96.0 1e-176 MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITGIRAGRAKPGLLRQHLTAVKAAAE ICRATVEGAELGSQRLVFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEV SGGTDNPSAPPADFIRRVLEPLLAKIGVHQQTTLLRHGFYPAGGGVVATEVSPVASFNSL QLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEV ESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASPAAVGEYLADQLVLPMALAGTGEF TVAHPSCHLLTNIAVVERFLPVRFGLIETDGVTRVSIE >gi|296918667|gb|GG773033.1| GENE 634 671415 - 674120 2392 901 aa, chain - ## HITS:1 COG:ECs4260 KEGG:ns NR:ns ## COG: ECs4260 COG2909 # Protein_GI_number: 15833514 # Func_class: K Transcription # Function: ATP-dependent transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 901 1 901 901 1674 99.0 0 MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLISQWAAGKNDIG WYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWH SPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSRNLPQLGIANLRVRDQLLEIG SQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGWATALQLIALSARQNTHSAHKSA RRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEE IERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQWELAAELPEIHRAAAESWMAQGFPSEA IHHALAAGDALMLRDILLNHAWSLFNHSELSLLEESLKALPWDSLLENPQLVLLQAWLMQ SQHRYGEVNTLLARAEHEIKDIREGTMHAEFNALRAQVAINDGNPDEAERLAKLALEELP PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL SSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYW QMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFESAEIVLEELNENARS LRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQ LIQLNTLPELEQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQRE WQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQAAVQHAQKLLKMMGYG V >gi|296918667|gb|GG773033.1| GENE 635 674743 - 677136 2596 797 aa, chain + ## HITS:1 COG:ECs4259 KEGG:ns NR:ns ## COG: ECs4259 COG0058 # Protein_GI_number: 15833513 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Escherichia coli O157:H7 # 1 797 1 797 797 1638 99.0 0 MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPVANQR HVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLA ACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRGNYPWFRHNEALDVQV GIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFL RAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAGRKLHELAE YEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKL VKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNG VAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLKKEWTND LDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYK RQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDP QVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG ANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGD KHAFDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFS SDRSIRDYQARIWQAKR >gi|296918667|gb|GG773033.1| GENE 636 677146 - 679230 1963 694 aa, chain + ## HITS:1 COG:malQ KEGG:ns NR:ns ## COG: malQ COG1640 # Protein_GI_number: 16131292 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Escherichia coli K12 # 1 684 1 684 694 1403 98.0 0 MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVY TSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRA HCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWGIGDFGDLKAMLEDVAKRGGS FIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQT LQQARDADWVDYSTVTTLKMTALRMAWKGFAQRDDEQMTAFRQFVAEQGDSLFWQAAFDA LHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWE ISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDP HIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPGDDLLS ILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRSPKAYPEQS MAVAATHDLPTLRGYWESGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCL PKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWR RKLSATLETMFADDGVNKLLKDLDRRRRAAAKKK >gi|296918667|gb|GG773033.1| GENE 637 679275 - 680591 1699 438 aa, chain - ## HITS:1 COG:ECs4257 KEGG:ns NR:ns ## COG: ECs4257 COG2610 # Protein_GI_number: 15833511 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli O157:H7 # 1 438 1 438 438 700 100.0 0 MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLDKVIGSIKAGVGGTLGS LALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVVLTGFTVGFALFYEVGFVL MLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGPTAIATIFNADMGKTLLYGTI LAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEEMPSFGVSVWTSLVPVVLMAMRA IAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFTFGLNRGRSMDQINDTLVSSIKIIA MMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNISPLLMAWSIAAVLRIALGSATVAAIT AGGIAAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIKSWSMLE TIISVCGLVGCLLLNMVI >gi|296918667|gb|GG773033.1| GENE 638 680952 - 681527 728 191 aa, chain - ## HITS:1 COG:yhgI_2 KEGG:ns NR:ns ## COG: yhgI_2 COG0694 # Protein_GI_number: 16131290 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin-like proteins and domains # Organism: Escherichia coli K12 # 97 191 1 95 95 197 100.0 8e-51 MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDL LTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQIN PQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRDL TEHQRGEHSYY >gi|296918667|gb|GG773033.1| GENE 639 681586 - 682269 256 227 aa, chain - ## HITS:1 COG:yhgH KEGG:ns NR:ns ## COG: yhgH COG1040 # Protein_GI_number: 16131289 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Escherichia coli K12 # 1 227 17 243 243 399 98.0 1e-111 MLTVPGLCWLCRMPLALGHWGICSVCSRAARTDKTLCPQCGLPATHSHLPCGRCLQKPPP WQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVLHARRTTGLQLPDRIISVP LWQRRHWRRGFNQSDLLCQPLSRWLHCRWDSEAVTRTRATATQHFLSARLRKRNLKNAFR LELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWCLCRTL >gi|296918667|gb|GG773033.1| GENE 640 682307 - 683077 552 256 aa, chain + ## HITS:1 COG:ECs4255 KEGG:ns NR:ns ## COG: ECs4255 COG0596 # Protein_GI_number: 15833508 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 508 98.0 1e-144 MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALS LADMAEAVLRQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGI KPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGL EILKTVDLRLPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFIS HPVEFHHLLVALKQRV >gi|296918667|gb|GG773033.1| GENE 641 683181 - 683279 83 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDAEREYLIIYLIGYLLGRRLEALDIAKRML >gi|296918667|gb|GG773033.1| GENE 642 683297 - 684190 747 297 aa, chain - ## HITS:1 COG:yhgA KEGG:ns NR:ns ## COG: yhgA COG5464 # Protein_GI_number: 16131287 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 292 1 288 292 541 91.0 1e-154 MSKKQSSTPHDALFKLFLRQPETARDFLAFHLPAPIHALCDMKTLKLESSSFIDDDLRES YSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAAMQNHLDAGYKTLPMVVPL LFYHGIESPYPYSLCWLDCFADLNLARQLYASAFPLIDVTVMPDDEIMQHRRMALLELIQ KHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQTGDAVRFNDFIDGVAEHSPKHK ENLMTIAERLRQEGFQKGIRTNALNIAKTMLDAGVSLEDVLRFTSLTVEDLAEINHQ >gi|296918667|gb|GG773033.1| GENE 643 684393 - 684629 308 78 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3797 NR:ns ## KEGG: ECS88_3797 # Name: yhgG # Def: DNA-binding transcriptional regulator # Organism: E.coli_S88 # Pathway: not_defined # 1 78 1 78 78 141 100.0 7e-33 MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLKQLESMGKAVRIQEEPDGCLSGS CKSCPEGKACLHEWWALR >gi|296918667|gb|GG773033.1| GENE 644 684640 - 686961 2771 773 aa, chain - ## HITS:1 COG:feoB KEGG:ns NR:ns ## COG: feoB COG0370 # Protein_GI_number: 16131285 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Escherichia coli K12 # 1 773 1 773 773 1501 99.0 0 MKKLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGT YSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALN MLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYAQP LLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDAALARLRNEMDDP ALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDKIVLNRFLGLPIFLFVMYLMFLLAI NIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDWLTIFLAQGLGGGINTVLPLVPQIGMM YLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSVMGARTLDAPRER LMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYMLGIVMAVLTGLMLKYTIMRG EATPFVMELPVYHVPHVKSLVIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVD NINDSALASVSRVITPVFKPIGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDE EFNPAEFNLGEELFSAVDETWQSLKDTFSLSVLMNPIEASKGDGEMGTGAMGVMDQKFGS AAAAYSYLIFVLLYVPCISVMGAIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQH PTYSLVCILAVILFNIVVIGLLRRARSRVDVELLATRKSVSSCCAASTTGDCH >gi|296918667|gb|GG773033.1| GENE 645 686978 - 687205 256 75 aa, chain - ## HITS:1 COG:ECs4250 KEGG:ns NR:ns ## COG: ECs4250 COG1918 # Protein_GI_number: 15833504 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 147 100.0 6e-36 MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAPLGDPIHIETRRVSLVL RKKDLALLEVEAVSC >gi|296918667|gb|GG773033.1| GENE 646 687645 - 689966 1643 773 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein [Symbiobacterium thermophilum IAM 14863] # 1 743 1 743 764 637 48 0.0 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL SYLRELEERRQAILKSISEQGKLTDDLANAINATLSKTELEDLYLPYKPKRRTRGQIAIE AGLEPLADLLWSDPSHTPEVAAAQYIDADKGVADTKAALDGARYILMERFAEDAALLAKV RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGILQLSLN ADPQFEEPPKESYCEQIIMEHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR >gi|296918667|gb|GG773033.1| GENE 647 690100 - 690528 625 142 aa, chain - ## HITS:1 COG:ECs4248 KEGG:ns NR:ns ## COG: ECs4248 COG0782 # Protein_GI_number: 15833502 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Escherichia coli O157:H7 # 1 142 13 154 170 274 100.0 3e-74 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR RVRYLTKCMENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI DSPMARALLKKEVGDLAVVNTP >gi|296918667|gb|GG773033.1| GENE 648 690756 - 691475 937 239 aa, chain + ## HITS:1 COG:ECs4247 KEGG:ns NR:ns ## COG: ECs4247 COG0745 # Protein_GI_number: 15833501 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 447 100.0 1e-126 MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPG EDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVL RRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPL SRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA >gi|296918667|gb|GG773033.1| GENE 649 691472 - 692824 1231 450 aa, chain + ## HITS:1 COG:envZ KEGG:ns NR:ns ## COG: envZ COG0642 # Protein_GI_number: 16131281 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 450 1 450 450 895 99.0 0 MRRLRFSPRSSFARTLLLIVTLLFVSLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTD KLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWAQHYEFLSHQMAQQLGGPT EVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPLFRYTLAIMLLAIGGAWLFIR IQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAG VSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMEMAD LNAVLGEVIAAESGYEREIETALYPGSIEVKMHPLSIKRAVANMVVNAARYGNGWIKVSS GTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTISGTGLGLAIVQRIVDNHNGML ELGTSERGGLSIRAWLPVPVTRAQGMTKEG >gi|296918667|gb|GG773033.1| GENE 650 692900 - 694522 2122 540 aa, chain - ## HITS:1 COG:pckA KEGG:ns NR:ns ## COG: pckA COG1866 # Protein_GI_number: 16131280 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Escherichia coli K12 # 1 540 1 540 540 1116 99.0 0 MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGYERGVLTNLGAVAVDTG IFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETWQHLKGLVTKQLSGKRLFV VDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGFKPDFIVMNGAKCTNPQW KEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEK GDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEI YNAIRRDALLENVTVREDGTIDFDDGSKTENTRVSYPIYHIENIVKPVSKAGHATKVIFL TADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQ YAEVLVKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNL AIPTELPGVDTKILDPRNTYASPEQWQEKAETLAKLFIDNFDKYTDTPAGAALVAAGPKL >gi|296918667|gb|GG773033.1| GENE 651 694901 - 696625 1376 574 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3788 NR:ns ## KEGG: ECS88_3788 # Name: yhgE # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 574 1 574 574 986 100.0 0 MDNVELSPATRWGMIATGLLQGVVCYLLIAWLAGKNLSWIVYGVPATVAFSSVLLFSVIS FKQNRLWGWLALVFIATLGMSGWLKWQTDGMTPWRAEKALWDFGCYLLLMAMLLLPWIQQ SLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFKTLFFA TDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVLDPQKASLPWTGPLRCLIKTALLVAPLYVFAA AWALWLRVAQYGWTADRLQGALAVLVLLVWSLGYFVSIVWRKGQNPLDLQGKVNLVVSLL VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIYMLEQSGRYGRAALESLKSDA EYMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRYNVM TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSARKEWDALDMSLLPRQITKE KLLAAAKDGKLGTRPKAWRDLVVDGERLDVNLNE >gi|296918667|gb|GG773033.1| GENE 652 696688 - 697566 1029 292 aa, chain - ## HITS:1 COG:ZyrfI KEGG:ns NR:ns ## COG: ZyrfI COG1281 # Protein_GI_number: 15803904 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Escherichia coli O157:H7 EDL933 # 1 292 3 294 294 585 100.0 1e-167 MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLK FDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITITPS EGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNA QQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCADA LKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPADPQVH >gi|296918667|gb|GG773033.1| GENE 653 697591 - 697992 459 133 aa, chain - ## HITS:1 COG:ECs4242 KEGG:ns NR:ns ## COG: ECs4242 COG1188 # Protein_GI_number: 15833496 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 214 100.0 3e-56 MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQG NDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMPHPDRRPDKKE RRDLLRFKHGDSE >gi|296918667|gb|GG773033.1| GENE 654 698003 - 698671 865 222 aa, chain - ## HITS:1 COG:ECs4241 KEGG:ns NR:ns ## COG: ECs4241 COG1011 # Protein_GI_number: 15833495 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 222 16 237 237 459 100.0 1e-129 MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHD VQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHP HNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILD AAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM >gi|296918667|gb|GG773033.1| GENE 655 698736 - 699026 291 96 aa, chain - ## HITS:1 COG:no KEGG:E2348C_3642 NR:ns ## KEGG: E2348C_3642 # Name: yrfF # Def: predicted inner membrane protein # Organism: E.coli_0127 # Pathway: not_defined # 1 96 616 711 711 183 100.0 2e-45 MLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQ AWRRYQRHRTRMMKIQAYYESCLNPQLITPSESLIE >gi|296918667|gb|GG773033.1| GENE 656 699161 - 700915 1415 584 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3784 NR:ns ## KEGG: ECS88_3784 # Name: igaA # Def: intracellular growth attenuator protein # Organism: E.coli_S88 # Pathway: not_defined # 1 567 1 567 711 1087 99.0 0 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFVDAQTRKLTSEERSAVENYLESL TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP PFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQEIRGYALQPVPSTQASIRGEESE QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ DLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPL DMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPF LPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLR PVSAESLDNLVATSTAPFITHETARGGGGPRRLSRMKRRERHNH >gi|296918667|gb|GG773033.1| GENE 657 701235 - 701795 623 186 aa, chain + ## HITS:1 COG:ECs4239 KEGG:ns NR:ns ## COG: ECs4239 COG0494 # Protein_GI_number: 15833493 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 186 1 186 186 357 99.0 8e-99 MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRPTNREAVMIVPIVDDHL ILIREYAVGTESYELGFSKGLIDPGESVFEAANRELKEEVGFGANDLTFLKKLSMAPSYF SSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEAPDFNEARNVSALFLVREWL KGQGRV >gi|296918667|gb|GG773033.1| GENE 658 701961 - 704513 2442 850 aa, chain - ## HITS:1 COG:ECs4238 KEGG:ns NR:ns ## COG: ECs4238 COG5009 # Protein_GI_number: 15833492 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Escherichia coli O157:H7 # 1 850 9 858 858 1708 99.0 0 MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRLQIPMQIYSADGELIAQ YGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRAASVALFSGHASQGAST ITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEILELYLNKIYLGYRAYGVGAAA QVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYITQQQF DQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRYGESAYEDGYRIYTTITRKVQQAAQ QAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNNKITDTLKALPTYGPLLPAAVTSANPQ EATAMLADGSTVVLSMEGVRWARPYRSDTQQGPTPRKVTDVLQTGQQIWVRQVDDAWWLA QVPEVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGL TLASMLNDVPISRWDAGAGSDWQPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDY AAEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLVDPWFISKIENDQG GVIFEAKPKVACPECDIPVIYGDTQKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQA LVAKTGAQEYAPHVINTPLAFLIKSALNTNIFGEPGWQGTGWRAGRDLQRHDIGGKTGTT NSSKDAWFSGYGPGVVTSVWIGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAY MKAVLEGVPEQPLTPPPGIVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTI IDNGEAQELF >gi|296918667|gb|GG773033.1| GENE 659 704633 - 705412 646 259 aa, chain + ## HITS:1 COG:no KEGG:APECO1_3069 NR:ns ## KEGG: APECO1_3069 # Name: yrfD # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 259 10 268 268 499 100.0 1e-140 MAFKNWQIGLHLQQQEAVAVAIVRSAKECLLHRWWRLPLENDIIKDGRIVDVQRLANTLL PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQMAWLSGTMARELDMDPDSLRFD YSEDALSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW RDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVALCGEGGFDPWEAVSVRQPPL PPPGGDFAIALGLALGKVY >gi|296918667|gb|GG773033.1| GENE 660 705412 - 705951 285 179 aa, chain + ## HITS:1 COG:yrfC KEGG:ns NR:ns ## COG: yrfC COG3166 # Protein_GI_number: 16131271 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilN # Organism: Escherichia coli K12 # 1 179 1 179 179 246 96.0 2e-65 MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTSNAEARVNAVLLQTEQQ LARSLQITKPRLLERQQLREQRLQRQRQRQFTRDWQSALEALAALLPEHAWLTTISWQQG TLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQGRWQFEYQLTRKVSDEHVL >gi|296918667|gb|GG773033.1| GENE 661 705935 - 706375 237 146 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3778 NR:ns ## KEGG: ECS88_3778 # Name: yrfB # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 146 1 146 146 264 100.0 7e-70 MNMFFDWWFATSLRLRQFCWAVWLLVLVTLIFLSLTHHEESDALIRLRANHHQQWAALYR LVDTTSFSEEKTLPFSPLDFQLSGAQLVYWHPSAQGGELALKTLWEAVPSAFTRLAERNV SVSRFLLSVEGDDLLFTLQLETPHEG >gi|296918667|gb|GG773033.1| GENE 662 706365 - 706769 236 134 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3777 NR:ns ## KEGG: ECS88_3777 # Name: yrfA # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 134 1 134 134 258 100.0 5e-68 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK WRRVQQNDVLENGWTILQLTPDALTLGTGTNCEPPHWLWQRQGDTNEAMDSRTTVDAYTR RTGGKAAKSDADGG >gi|296918667|gb|GG773033.1| GENE 663 706681 - 707919 1183 412 aa, chain + ## HITS:1 COG:ECs4233 KEGG:ns NR:ns ## COG: ECs4233 COG4796 # Protein_GI_number: 15833487 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Escherichia coli O157:H7 # 1 412 1 412 412 730 98.0 0 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQVLAEQEKLNLVVSPDVSGTVSL HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSVAWQNDNIARQEAEQTRAQANLPLENR NITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSTLEQWVSQMDLPVGQ VELSAHIVTINEKSLRELGVKWTLADAQQAGGVGQVTTLGSDLSVATATTHIGFNIGRIN GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE >gi|296918667|gb|GG773033.1| GENE 664 708320 - 708841 551 173 aa, chain + ## HITS:1 COG:ECs4232 KEGG:ns NR:ns ## COG: ECs4232 COG0703 # Protein_GI_number: 15833486 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Escherichia coli O157:H7 # 1 173 68 240 240 321 100.0 4e-88 MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFR DREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKR PLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN >gi|296918667|gb|GG773033.1| GENE 665 708898 - 709986 889 362 aa, chain + ## HITS:1 COG:ECs4231 KEGG:ns NR:ns ## COG: ECs4231 COG0337 # Protein_GI_number: 15833485 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Escherichia coli O157:H7 # 1 362 1 362 362 692 99.0 0 MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNETLAPLYLDKVRGVLEQA GVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQR GVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLDCLKTLPPRELAS GLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYCIRRCCELKAEVVAADERETGLR ALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAARTSERLGQFSSAETQRIITLLTRA GLPVNGPREMSAQAYLPHMLRDKKVLAGEMRLILPLAIGKSEVRSGVSHELVLNAIADCQ SA >gi|296918667|gb|GG773033.1| GENE 666 710078 - 711364 1085 428 aa, chain + ## HITS:1 COG:ECs4230 KEGG:ns NR:ns ## COG: ECs4230 COG3266 # Protein_GI_number: 15833484 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 484 99.0 1e-136 MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKA RNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGI GSALKAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAENTQQDVSLPPISSTP TQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASR DTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAA TSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDN LNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPL RQVQADLK >gi|296918667|gb|GG773033.1| GENE 667 711703 - 712338 501 211 aa, chain + ## HITS:1 COG:ECs4229 KEGG:ns NR:ns ## COG: ECs4229 COG0338 # Protein_GI_number: 15833483 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Escherichia coli O157:H7 # 1 211 68 278 278 422 99.0 1e-118 MRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQDPFRRAVLFLYLNRYGYNGLCRYNL RGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFFYCESYADSMARADDASVVYCDPPYAPL SATANFTAYHTNSFTLEQQAHLAEIAEGLVDRHIPVLISNHDTMLTREWYQRAKLHVVKV RRSISSNGGTRKKVDELLALYKPGVVSPAKK >gi|296918667|gb|GG773033.1| GENE 668 712356 - 713033 745 225 aa, chain + ## HITS:1 COG:ECs4228 KEGG:ns NR:ns ## COG: ECs4228 COG0036 # Protein_GI_number: 15833482 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 441 100.0 1e-124 MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYG ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGV KVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSELAKVSHE >gi|296918667|gb|GG773033.1| GENE 669 713026 - 713784 1013 252 aa, chain + ## HITS:1 COG:ECs4227 KEGG:ns NR:ns ## COG: ECs4227 COG0546 # Protein_GI_number: 15833481 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 489 98.0 1e-138 MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADILMER ALTWARQERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTL GALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERM GIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSLNDLLPALG LPHSENQESKND >gi|296918667|gb|GG773033.1| GENE 670 713777 - 714781 1225 334 aa, chain + ## HITS:1 COG:ECs4226 KEGG:ns NR:ns ## COG: ECs4226 COG0180 # Protein_GI_number: 15833480 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 685 100.0 0 MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQHAITVRQDAQKLRKAT LDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYAEN INAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDIAQRFNALYGDIFKVPEPFIP KSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVKKIKRAVTDSDEPPVVRYDVQNK AGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGEVADAVSGMLTELQERYHRFRNDEA FLQQVMKDGAEKASAHASRTLKAVYEAIGFVAKP >gi|296918667|gb|GG773033.1| GENE 671 714941 - 715846 793 301 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3768 NR:ns ## KEGG: ECS88_3768 # Name: yhfZ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 301 1 301 301 603 100.0 1e-171 MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVGLTQAALKTLESSGAIR IERRGRNGSYLVEMDNKALLTHVDINNVVCAMPLPYTRLYEGLASGLKAQFDGIPFYYAH MRGADIRVECLLNGVYDMAVVSRLAAESYLTQKGLCLALELGPHTYVGEHQLICRKGESA NVKRVGLDNRSADQKIMTDVFFGDSDVERVDLSYHESLQRIVKGDVDAVIWNVVAENELT MLGLEATPLTDDPRFLQATEAVILTRADDYPMQQLLRAVVDKHALLAHQQRVVSGEQEPS Y >gi|296918667|gb|GG773033.1| GENE 672 715863 - 716225 353 120 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C3880 NR:ns ## KEGG: UTI89_C3880 # Name: yhfY # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 120 15 134 134 224 100.0 6e-58 METRLNLLCDAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE EIEPLDDELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV >gi|296918667|gb|GG773033.1| GENE 673 716309 - 717472 1081 387 aa, chain + ## HITS:1 COG:yhfX KEGG:ns NR:ns ## COG: yhfX COG3457 # Protein_GI_number: 16131259 # Func_class: E Amino acid transport and metabolism # Function: Predicted amino acid racemase # Organism: Escherichia coli K12 # 1 387 1 387 387 750 93.0 0 MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQVLENGKRLIETARLYGIELYLMT KQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVSDAVEQG TDVITVFTLDKAREISAAAVKTGRVQSVLLKVYSDDDFLYPGQESGFVQHSLHEVVAEIQ NLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLVQARDQLAKSGIAIEQLNAPSATSCT SLPLLAEYGVTHTEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYR RGHAQHALVFTPENQRITETYLNAVDDSSIDYTLPLAGEHPVSSAVVLCFRTQIFITRSD VVLVSGIHRGEPEIVGRYDSLGNPLEA >gi|296918667|gb|GG773033.1| GENE 674 717473 - 718699 1368 408 aa, chain + ## HITS:1 COG:yhfW KEGG:ns NR:ns ## COG: yhfW COG1015 # Protein_GI_number: 16131258 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Escherichia coli K12 # 1 408 1 408 408 815 98.0 0 MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYA PGDMQPSDSSTWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGW QVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKMGRIVREQVQVG RVITFGGLLPDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL YEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMDITLNEFNTYPTAFICTNIQETDLA GHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVY QQGLVATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSFRFAGDTL >gi|296918667|gb|GG773033.1| GENE 675 718696 - 719574 915 292 aa, chain + ## HITS:1 COG:php KEGG:ns NR:ns ## COG: php COG1735 # Protein_GI_number: 16131257 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Escherichia coli K12 # 1 292 1 292 292 586 98.0 1e-167 MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMARGVRNVIEMTNRYMG RNVQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTDLKA GIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLS RVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVML SMDITRRSHLKANGGYGYDFLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ >gi|296918667|gb|GG773033.1| GENE 676 719585 - 719938 557 117 aa, chain + ## HITS:1 COG:no KEGG:S4366 NR:ns ## KEGG: S4366 # Name: yhfU # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 117 14 130 130 215 100.0 4e-55 MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK >gi|296918667|gb|GG773033.1| GENE 677 719950 - 721254 1385 434 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3762 NR:ns ## KEGG: ECS88_3762 # Name: yhfT # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 434 1 434 434 727 99.0 0 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF VASVGISFTLKNGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGILILTCLLPVNQLLT ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYSPHLN PESIEIFIGMVMLLGIAITHDLRHRDENDIDASGMSVFEERTSLIIKNLPYIAIVGALIA AVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALAT GVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIR NAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGI LLNVLYWLGLFVPA >gi|296918667|gb|GG773033.1| GENE 678 721266 - 722351 747 361 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3761 NR:ns ## KEGG: ECS88_3761 # Name: yhfS # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 361 1 361 361 650 100.0 0 MKTFPLQSLTLIEAQQKQFALVDTICRHFPGCEFLTCGDLGLTPGLNQPRITQRVEQVLA DAFHAQAAALVQGAGTGAIRAALAALLKSGQRLLVHDAPVYPTTRVIIEQMGLTLITADF NDLSALKQVVDEQQPDAALVQHTRQQPQDRYVLADVLATLRAAGVPALTDDNYAVMKVAR IGCECGANVSTFSCFKLFGPEGVGAVVGDADVISRIRATLYSGGSQIQGAQALEVLRGLV LAPVMHAVQAGVSERLLALLNGGAVAEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKL GALPYPVGAESKYEIPPLFYRLSGTFRQANPQLEHCAIRINPNRSGEETILRILRESIAS I >gi|296918667|gb|GG773033.1| GENE 679 722459 - 722626 251 55 aa, chain - ## HITS:1 COG:no KEGG:ECO111_4179 NR:ns ## KEGG: ECO111_4179 # Name: yhfL # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 55 1 55 55 107 100.0 2e-22 MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTAQ >gi|296918667|gb|GG773033.1| GENE 680 722878 - 724251 1285 457 aa, chain - ## HITS:1 COG:cysG_2 KEGG:ns NR:ns ## COG: cysG_2 COG0007 # Protein_GI_number: 16131246 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Escherichia coli K12 # 211 457 1 247 247 500 99.0 1e-141 MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTL VEGPFDESLLDTCWLAIAATDDDALNQRVSEAAESRRIFCNVVDAPKAASFIMPSIIDRS PLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQLRGRVKQQFATMGERRRFWE KLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEVVLVGAGPGDAGLLTLKGLQQIQ QADVVVYDRLVSDDIMNLIRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLK GGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLITGHL KTGGELDWENLAAEKQTLVFYMGLNQAATIQQKLIEYGMPGEMPVAIVENGTAVTQRVID GTLTQLGELAQQMNSPSLIIIGRVVGLRDKLNWFSNH >gi|296918667|gb|GG773033.1| GENE 681 724270 - 725076 988 268 aa, chain - ## HITS:1 COG:ZnirCm KEGG:ns NR:ns ## COG: ZnirCm COG2116 # Protein_GI_number: 15805004 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli O157:H7 EDL933 # 1 268 1 268 268 466 99.0 1e-131 MFTDTITKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLV MGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVA MLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKF IAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVF MGLGYWYATPKANRPVADKFNQTETAAG >gi|296918667|gb|GG773033.1| GENE 682 725238 - 725564 438 108 aa, chain - ## HITS:1 COG:ECs4217 KEGG:ns NR:ns ## COG: ECs4217 COG2146 # Protein_GI_number: 15833471 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 221 99.0 2e-58 MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIA EHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYDARVKDGVVQLRG >gi|296918667|gb|GG773033.1| GENE 683 725561 - 728104 3038 847 aa, chain - ## HITS:1 COG:nirB KEGG:ns NR:ns ## COG: nirB COG1251 # Protein_GI_number: 16131244 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Escherichia coli K12 # 1 847 1 847 847 1736 99.0 0 MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEE LSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKG SDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPML MAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVAARKTMRFADGSELEVDFIVFS TGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRVFGLVAPGYKMA QVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEIYKRLI VSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHSGSGKPSIGVDKLPD SAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIE VNNNLCEHFAYSRQELFHLIRVEGIKTFEELLAKHGKGYGCEVCKPTVGSLLASCWNEYI LKPEHTPLQDSNDNFLANIQKDGTYSVIPRSPGGEITPEGLMAVGRIAREFNLYTKITGS QRLAMFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVE LENRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLL AADIDRETLIKYLDRFMMFYIRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLE EEMARLREAVVCEWTETVNTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPV TLVEDNA >gi|296918667|gb|GG773033.1| GENE 684 728366 - 729547 1312 393 aa, chain - ## HITS:1 COG:yhfC KEGG:ns NR:ns ## COG: yhfC COG0477 # Protein_GI_number: 16131243 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 393 1 393 393 684 100.0 0 MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSSMSNTFTFLNAGILISI FLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAAMFILGVVSGITMSIGTFL VTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSIEWYWVYACIGLVYVAIFILT FGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCYILGQLGFISWVPEYAKGLGMSL NDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSI LALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVLTCGTIGTMLTFVVTGPIVEHSGPQAA LLTANGLYAVVFVMCFLLGFVSRHRQHNTLTSH >gi|296918667|gb|GG773033.1| GENE 685 729817 - 730389 574 190 aa, chain + ## HITS:1 COG:ECs4214 KEGG:ns NR:ns ## COG: ECs4214 COG0652 # Protein_GI_number: 15833468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 359 100.0 2e-99 MFKSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYV NSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADK DSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKP VVILSAKVLP >gi|296918667|gb|GG773033.1| GENE 686 730501 - 730668 135 55 aa, chain + ## HITS:1 COG:no KEGG:b3362 NR:ns ## KEGG: b3362 # Name: yhfG, ECK3350, JW3325 # Def: predicted protein # Organism: E.coli # Pathway: not_defined # 1 55 1 55 55 69 96.0 4e-11 MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALARLEALRRHYER >gi|296918667|gb|GG773033.1| GENE 687 730658 - 731260 628 200 aa, chain + ## HITS:1 COG:ECs4212 KEGG:ns NR:ns ## COG: ECs4212 COG2184 # Protein_GI_number: 15833466 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Escherichia coli O157:H7 # 1 200 1 200 200 387 96.0 1e-108 MSDKFGEGRDPYLYPGLDIMRNRLNIRQQQRLEQAAYEMTALRAATIELGPLVRGLPHLR TLHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYLEKEGNALMQDLEEEKYLTSLEKDKF VERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQLSWQGIEKEAWNQANQNGAMG DLTALQMIFSKVVSEAGESE >gi|296918667|gb|GG773033.1| GENE 688 731292 - 731855 523 187 aa, chain + ## HITS:1 COG:ECs4211 KEGG:ns NR:ns ## COG: ECs4211 COG0512 # Protein_GI_number: 15833465 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 394 97.0 1e-110 MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAG ISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHNGVGVFKGLAN PLTVTRYHSLVVEPDSLPECFEVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQL LANFLHR >gi|296918667|gb|GG773033.1| GENE 689 731941 - 733161 1327 406 aa, chain + ## HITS:1 COG:argD KEGG:ns NR:ns ## COG: argD COG4992 # Protein_GI_number: 16131238 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli K12 # 1 406 1 406 406 817 99.0 0 MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEYVDFAGGIAVTALGHCH PALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERVVFMNSGTEANETAFKLAR HYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVK AVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRTGDLFA YMHYGVTPDILTSAKALGGGFPVSAMLTTAEIASAFHPGSHGSTYGGNPLACAVAGAAFD IINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGAELKPQYKGRARDFLYA GAEEGVMVLNAGPDVMRFAPSLVVEDADIDEGMHRFAHAVAKVIGA >gi|296918667|gb|GG773033.1| GENE 690 733228 - 735318 1586 696 aa, chain - ## HITS:1 COG:ECs4209 KEGG:ns NR:ns ## COG: ECs4209 COG1289 # Protein_GI_number: 15833463 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 696 1 696 696 1329 99.0 0 MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVPACCNIAGLDTPHKRFF KRLIIGASLFATCSLLTQVLLAKDVPLPFLLTGLTLVLGVTAELGPLHAKLLPASLLAAI FTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQPLRESLSLLYRELADYCEAKY SLLTQHTDPDKALPPLLVRQQKAVDLITQCYQQMHMLSAQNNTDYKRMLRIFQEALDLQE HISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARLRVLADDILYHRLPTRFTMEKQIGA LEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPLYARDLLADKQRRMPLLPALKSYLSLK SPALRNAGRLSVMLSVASLMGTALHLPKSYWILMTVLLVTQNGYGATRLRIVNRSVGTVV GLIIAGVTLHFKIPEGYTLTLMLITTLASYLILRKNYGWATVGFTITAVYTLQLLWLNGE QYILPRLIDTIIGCLIAFGGTVWLWPQWQSGLLRKNAHDALEAYQDAIRLILSEDPQPTP LAWQRMRVNQAHNTLYNSLNQAMQEPAFNSHYLADMKLWVTHSQFIVEHINAMTTLAREH RALPPELAQEYLQSCEIAIQRCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQ RVIGHLNTMHTISSMAWRQRPHHGIWLSRKLRDSKA >gi|296918667|gb|GG773033.1| GENE 691 735369 - 736001 894 210 aa, chain - ## HITS:1 COG:ECs4208 KEGG:ns NR:ns ## COG: ECs4208 COG0664 # Protein_GI_number: 15833462 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 1 210 1 210 210 418 100.0 1e-117 MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQ MARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS RETVGRILKMLEDQNLISAHGKTIVVYGTR >gi|296918667|gb|GG773033.1| GENE 692 736303 - 736707 426 134 aa, chain + ## HITS:1 COG:ECs4207 KEGG:ns NR:ns ## COG: ECs4207 COG1765 # Protein_GI_number: 15833461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 257 100.0 3e-69 MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGR QDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLE KAVNITHSYEVVAA >gi|296918667|gb|GG773033.1| GENE 693 736762 - 737631 840 289 aa, chain - ## HITS:1 COG:prkB KEGG:ns NR:ns ## COG: prkB COG3954 # Protein_GI_number: 16131234 # Func_class: C Energy production and conversion # Function: Phosphoribulokinase # Organism: Escherichia coli K12 # 1 289 1 289 289 593 99.0 1e-169 MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKAR DAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQSL PEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLEWIQKLIRDTSERGHSREAVM DSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFAAKGIPSLDESFVVIHFRNLEGI DFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQRLMEGKKIE >gi|296918667|gb|GG773033.1| GENE 694 737685 - 737903 326 72 aa, chain - ## HITS:1 COG:ECs4205 KEGG:ns NR:ns ## COG: ECs4205 COG3089 # Protein_GI_number: 15833459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 72 1 72 72 129 98.0 1e-30 MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVSDVKRQLQCGEAVLVWSELHE TVNIMPRSQFRE >gi|296918667|gb|GG773033.1| GENE 695 737897 - 738859 911 320 aa, chain - ## HITS:1 COG:yheT KEGG:ns NR:ns ## COG: yheT COG0429 # Protein_GI_number: 16131232 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Escherichia coli K12 # 1 320 21 340 340 671 98.0 0 MRGFSNCHLQTMLPRLFRRKVKFTPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVVFHG LEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQR EFGHAPTAAVGYSLGGNMLACLLAKEGNDLPIDAAVIVSAPFMLEACSYHMEKGFSRIYQ RYLLNLLKANAARKLAAYPGTLPINLTQLKSVRRIREFDDLITARIHGYADAIDYYRQCS AMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQ MWLESRIPDWLTTYLEAKSC >gi|296918667|gb|GG773033.1| GENE 696 738919 - 740832 2432 637 aa, chain - ## HITS:1 COG:ECs4203 KEGG:ns NR:ns ## COG: ECs4203 COG0488 # Protein_GI_number: 15833457 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 637 1 637 637 1205 99.0 0 MIVFSSLQIRRGVRILLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTF PVSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAI DAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHL DLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRAT RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRF SFRAPESLPNPLLKMAKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG ELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQ GDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGAL VVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSA QARKDQKRREAELRAQTQPLRKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELT ACLQQQASAKSGLEECEMAWLEAQEQLEQMLLEGQSN >gi|296918667|gb|GG773033.1| GENE 697 740963 - 741514 418 183 aa, chain + ## HITS:1 COG:ECs4202 KEGG:ns NR:ns ## COG: ECs4202 COG2249 # Protein_GI_number: 15833456 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 182 2 183 184 365 100.0 1e-101 MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPREQALLRE HEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRY DALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARAYGDWLANPLSP GGC >gi|296918667|gb|GG773033.1| GENE 698 741514 - 743319 1057 601 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 7 590 9 612 618 411 36 1e-113 MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGPWGLGFISDVDEILHFS ELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALLAGLLMLTHFSWQAAVVGG IGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAVIPALALVPLLAGSADEHFDW MKIGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFTAATLLLVLGSALFMDALGLSMA LGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFISVGMSLNLGVLYTHLLWVVISVVV LVAVKILVLYLLARLYGVRSSERMQFAGVLSQGGEFAFVLFSTASSQRLFQGDQMALLLV TVTLSMMTTPLLMKLVDKWLSRQFNGPEEEDEKPWVNDDKPQVIVVGFGRFGQVIGRLLM ANKMRITVLERDISAVNLMRKYGYKVYYGDATQVDLLRSAGAEAAESIVITCNEPEDTMK LVEICQQHFPHLHILARARGRVEAHELLQAGVTQFSRETFSSALELGRKTLVTLGMHPHQ AQRAQLHFRRLDMRMLRELIPMHADTVQISRAREARRELEEIFQREMQQERRQLDGWDEF E >gi|296918667|gb|GG773033.1| GENE 699 743329 - 743529 195 66 aa, chain + ## HITS:1 COG:Z4708 KEGG:ns NR:ns ## COG: Z4708 COG3529 # Protein_GI_number: 15803863 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Escherichia coli O157:H7 EDL933 # 1 66 1 66 66 120 100.0 6e-28 MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVI GIFHPD >gi|296918667|gb|GG773033.1| GENE 700 743624 - 744214 746 196 aa, chain + ## HITS:1 COG:ECs4200 KEGG:ns NR:ns ## COG: ECs4200 COG1047 # Protein_GI_number: 15833454 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Escherichia coli O157:H7 # 1 148 1 148 196 271 100.0 7e-73 MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDV AVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVD GNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHHDHDHDGCCGGHGHDHGHEHG GEGCCGGKGNGGCGCH >gi|296918667|gb|GG773033.1| GENE 701 744263 - 744481 309 72 aa, chain - ## HITS:1 COG:ECs4199 KEGG:ns NR:ns ## COG: ECs4199 COG2900 # Protein_GI_number: 15833453 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 72 1 72 72 100 100.0 7e-22 MQDLSLEARLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDHLRLLTEKLKASQPSNI ASQAEETPPPHY >gi|296918667|gb|GG773033.1| GENE 702 744702 - 745514 1034 270 aa, chain + ## HITS:1 COG:ECs4198 KEGG:ns NR:ns ## COG: ECs4198 COG0545 # Protein_GI_number: 15833452 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli O157:H7 # 1 259 1 259 270 418 100.0 1e-117 MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKNDDQKSAYALGASLGRYM ENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKSSAQAKMEKD AADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKE FDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTLV FDVELLDVKPAPKADAKPEADAKAADSAKK >gi|296918667|gb|GG773033.1| GENE 703 745690 - 746412 741 240 aa, chain + ## HITS:1 COG:yheO KEGG:ns NR:ns ## COG: yheO COG2964 # Protein_GI_number: 16131225 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 240 5 244 244 469 100.0 1e-132 MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCS AIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNR EQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNA DRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK >gi|296918667|gb|GG773033.1| GENE 704 746412 - 746798 379 128 aa, chain + ## HITS:1 COG:yheN KEGG:ns NR:ns ## COG: yheN COG1553 # Protein_GI_number: 16131224 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Escherichia coli K12 # 1 128 1 128 128 223 96.0 5e-59 MRFAIVVTGPAYGTQQASSAFQFAQALIAEGHELSSVFFYREGVYNANQLTSPASDEFDL VRSWQQLNMQHGVALNICVAAALRRGVVDETEAGRLGLASSNLQTGFTLSGLGALAEASL TCDRVVQF >gi|296918667|gb|GG773033.1| GENE 705 746798 - 747157 292 119 aa, chain + ## HITS:1 COG:yheM KEGG:ns NR:ns ## COG: yheM COG2923 # Protein_GI_number: 16131223 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in the oxidation of intracellular sulfur # Organism: Escherichia coli K12 # 1 119 1 119 119 226 99.0 1e-59 MKRIAFVFSTVPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLLPGQKPDAVLARD YIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLEADALRRELANYDVILRF >gi|296918667|gb|GG773033.1| GENE 706 747164 - 747451 307 95 aa, chain + ## HITS:1 COG:ECs4194 KEGG:ns NR:ns ## COG: ECs4194 COG2168 # Protein_GI_number: 15833448 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in oxidation of intracellular sulfur # Organism: Escherichia coli O157:H7 # 1 95 1 95 95 180 97.0 6e-46 MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYLESLRNAPIKVYALNED LIARGLTGRISNDIIPIDYTDFVRLTVKHSSQMAW >gi|296918667|gb|GG773033.1| GENE 707 747517 - 747951 744 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|226956878|ref|YP_002807671.1| 30S ribosomal subunit protein S12 [Escherichia sp. 1_1_43] # 1 144 1 144 144 291 99 5e-77 MCEDVLLRVYEAKAKTRSYLMATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTT TPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRG ALDCSGVKDRKQARSKYGVKRPKA >gi|296918667|gb|GG773033.1| GENE 708 748048 - 748518 777 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803854|ref|NP_289888.1| 30S ribosomal protein S7 [Escherichia coli O157:H7 EDL933] # 1 156 1 156 156 303 100 7e-81 MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELE AFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRL ANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW >gi|296918667|gb|GG773033.1| GENE 709 748615 - 750729 2250 704 aa, chain + ## HITS:1 COG:ECs4191 KEGG:ns NR:ns ## COG: ECs4191 COG0480 # Protein_GI_number: 15833445 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Escherichia coli O157:H7 # 1 704 1 704 704 1402 100.0 0 MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG ITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFT GVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGG EELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILD DGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERF GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAV EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE ANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI KGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIA FKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPL SEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK >gi|296918667|gb|GG773033.1| GENE 710 750800 - 750931 176 44 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 44 1 44 407 72 72 4e-11 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:35:39 2011 Seq name: gi|296918666|gb|GG773034.1| Escherichia coli MS 110-3 genomic scaffold Scfld505, whole genome shotgun sequence Length of sequence - 4137 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 4, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 133 180 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 382 - 441 5.0 - TRNA 248 - 323 94.8 # Thr GGT 0 0 - TRNA 330 - 404 64.8 # Gly TCC 0 0 - TRNA 521 - 605 67.6 # Tyr GTA 0 0 - TRNA 614 - 689 91.8 # Thr TGT 0 0 2 2 Tu 1 . - CDS 874 - 1068 64 ## EcSMS35_4423 hypothetical protein - Prom 1317 - 1376 2.1 + Prom 813 - 872 4.7 3 3 Tu 1 . + CDS 1075 - 2001 840 ## COG1072 Panthothenate kinase + Term 2008 - 2037 1.2 - Term 1996 - 2025 0.4 4 4 Op 1 6/1.000 - CDS 2030 - 2995 818 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 5 4 Op 2 . - CDS 2992 - 4020 661 ## COG0812 UDP-N-acetylmuramate dehydrogenase - Prom 4043 - 4102 2.8 Predicted protein(s) >gi|296918666|gb|GG773034.1| GENE 1 2 - 133 180 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 44 1 44 407 73 75 2e-13 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA >gi|296918666|gb|GG773034.1| GENE 2 874 - 1068 64 64 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_4423 NR:ns ## KEGG: EcSMS35_4423 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 64 1 64 64 120 100.0 2e-26 MLFYTHKHVSGGHSSIGKAIFAMARHSSVEWVNGQEGNTRWGGIIRKNLSQEAIVEKQCD RYSI >gi|296918666|gb|GG773034.1| GENE 3 1075 - 2001 840 308 aa, chain + ## HITS:1 COG:ZcoaA KEGG:ns NR:ns ## COG: ZcoaA COG1072 # Protein_GI_number: 15804568 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 308 1 308 308 623 100.0 1e-178 MTPYLQFDRNQWAALRDSVPMTLSEDEIARLKGINEDLSLEEVAEIYLPLSRLLNFYISS NLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDG FLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDK TVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRFLKFR EGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILTKSANHA VEEVRLRK >gi|296918666|gb|GG773034.1| GENE 4 2030 - 2995 818 321 aa, chain - ## HITS:1 COG:ECs4900_2 KEGG:ns NR:ns ## COG: ECs4900_2 COG0340 # Protein_GI_number: 15834154 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Escherichia coli O157:H7 # 77 321 1 245 245 466 98.0 1e-131 MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSL PEPIQLLNAEKILSQLDDGSVAVLPVIDSTNQYLLDRIGELKSGDACVAEYQHAGRGRRG RKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQ DRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESVVNQGWITLQEAGINLDRNTLAA MLIRELRAALELFEQEGLTPYLSRWEKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLL EQDGIIKPWMGGEISLRSAEK >gi|296918666|gb|GG773034.1| GENE 5 2992 - 4020 661 342 aa, chain - ## HITS:1 COG:ECs4899 KEGG:ns NR:ns ## COG: ECs4899 COG0812 # Protein_GI_number: 15834153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 700 96.0 0 MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQHATAEGQPVLILGEGSNVLFLEDYRG TVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCIGSSPIQ NIGAYGVELQRVCAYVDCVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRL PKEWQPVLTYGDLTRLDPSTVTPQQVFDAVCHMRTTKLPDPKVNGNAGSFFKNPVVSAET ANALLAQFPTAPHYPQVDGSVKLAAGWLIDQCQLKGTQIGGAAVHRQQALVLINEHDAKS EDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGEVSAVETIS Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:35:47 2011 Seq name: gi|296918665|gb|GG773035.1| Escherichia coli MS 110-3 genomic scaffold Scfld548, whole genome shotgun sequence Length of sequence - 15804 bp Number of predicted genes - 23, with homology - 23 Number of transcription units - 3, operones - 3 average op.length - 7.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.000 + CDS 3 - 1082 729 ## COG5511 Bacteriophage capsid protein 2 1 Op 2 4/0.000 + CDS 1024 - 1824 287 ## COG5511 Bacteriophage capsid protein 3 1 Op 3 . + CDS 1814 - 3313 1169 ## COG0616 Periplasmic serine proteases (ClpP class) 4 1 Op 4 . + CDS 3310 - 3639 197 ## COG0616 Periplasmic serine proteases (ClpP class) 5 1 Op 5 . + CDS 3676 - 4023 329 ## ECS88_1370 head decoration protein (gpD) (major capsid protein D) 6 1 Op 6 . + CDS 4081 - 5109 1238 ## ECO111_2571 putative major capsid protein + Term 5115 - 5152 5.0 7 2 Op 1 . + CDS 5161 - 5544 261 ## APECO1_402 hypothetical protein 8 2 Op 2 . + CDS 5537 - 5890 189 ## ECS88_1373 tail attachment protein (minor capsid protein FII) 9 2 Op 3 . + CDS 5906 - 6439 223 ## ECS88_1374 minor tail protein Z (GpZ) 10 2 Op 4 . + CDS 6436 - 6831 469 ## ECUMN_1352 Minor tail protein U 11 2 Op 5 . + CDS 6839 - 7591 744 ## COG5492 Bacterial surface proteins containing Ig-like domains 12 2 Op 6 . + CDS 7605 - 8036 367 ## SbBS512_E1297 phage minor tail protein G 13 2 Op 7 . + CDS 8087 - 8476 158 ## ECH74115_1194 phage tail assembly protein T 14 2 Op 8 6/0.000 + CDS 8457 - 11030 2320 ## COG5281 Phage-related minor tail protein + Prom 11032 - 11091 6.1 15 2 Op 9 5/0.000 + CDS 11130 - 11459 223 ## COG4718 Phage-related protein 16 2 Op 10 6/0.000 + CDS 11459 - 12157 574 ## COG4672 Phage-related protein + Term 12190 - 12239 1.0 17 2 Op 11 6/0.000 + CDS 12306 - 12905 308 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 18 2 Op 12 . + CDS 12803 - 13444 568 ## COG4723 Phage-related protein, tail component + Prom 13452 - 13511 7.0 19 3 Op 1 . + CDS 13602 - 13856 80 ## ECS88_1384 hypothetical protein + Term 13877 - 13914 4.3 20 3 Op 2 5/0.000 + CDS 13923 - 14219 257 ## COG4733 Phage-related protein, tail component 21 3 Op 3 5/0.000 + CDS 14203 - 14775 528 ## COG4723 Phage-related protein, tail component + Term 14792 - 14828 5.3 22 3 Op 4 1/0.000 + CDS 14836 - 15267 388 ## COG4733 Phage-related protein, tail component 23 3 Op 5 . + CDS 15302 - 15803 272 ## COG4733 Phage-related protein, tail component Predicted protein(s) >gi|296918665|gb|GG773035.1| GENE 1 3 - 1082 729 359 aa, chain + ## HITS:1 COG:ECs1107 KEGG:ns NR:ns ## COG: ECs1107 COG5511 # Protein_GI_number: 15830361 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Escherichia coli O157:H7 # 1 356 6 361 530 691 97.0 0 VLIDVNGVPLRESLSYTGGGAGFGGQMAEWLPPSQSADAALLPALRLGNARADDLVRNNG IAANAVALHKDHIVGHMFLISYRPNWRWLGMRETAAKSFVDEVEAAWSEYAEGMFGEIDV EGKRTFTEFIREGVGVHAFNGEIFVQPVWDTESTQLFRTRFKAVSPKRVDTPGHGIGNRF LRAGVEVDRYGRAVAYHICEDDFPRSGSGRWERIPRELPTGRPAMLHIFEPVEDGQTRGA NQFYSVMERLKMLDSLQATQLQSAIVKAMYAATIESELDTEKAFEYIAGAPQGQKDNPLI NILDKFSTWYDTNSVTLGGVKIPHLFPGDDLKLQTAQDSDNGFSALEQALLRYIAAPPP >gi|296918665|gb|GG773035.1| GENE 2 1024 - 1824 287 266 aa, chain + ## HITS:1 COG:Z2133 KEGG:ns NR:ns ## COG: Z2133 COG5511 # Protein_GI_number: 15801570 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Escherichia coli O157:H7 EDL933 # 19 266 283 530 530 472 97.0 1e-133 MDFRRLNRRCCGISPPPPLDTEKAFEYIAGAPQEQKDNPLINILEKFSSWYDTNNVTLGG VKIPHLFPGDDLKLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSKVSYSSARA SANESWRYFMGRRKFIASRLATQMFSCWLEEALLRGIIRPPRARFDFYQARSAWSRAEWI GAGRMAIDGLKEVQESVMRIEAGLSTYEKELALMGEDYQDIFRQQVRESAEREKAGLSRP VWIAQAYQQQIAESRRPEEETTPRET >gi|296918665|gb|GG773035.1| GENE 3 1814 - 3313 1169 499 aa, chain + ## HITS:1 COG:ECs1108 KEGG:ns NR:ns ## COG: ECs1108 COG0616 # Protein_GI_number: 15830362 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli O157:H7 # 1 494 1 494 501 780 96.0 0 MRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGAASLSVPQQQVQFDAPGMLAETDE YMAGGKRPARVYRVVNGIAVLPVTGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVR GVLLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTS RIGSIGVMMSHVSYAGHLAQAGVDITLIYSGAHKVDGNQFEALPAEVRQDMQQRIDAARR MFAEKVAMYTGLSVDAVTGTEAAVFEGQSGIEAGLADELINASDAISVMATALNSNVRGG TMPQLTATEAAVQENQRVMGILTCQEAKGREQLATMLAGQQGMSVEQARAILAAAAPQQP VASAQSEADRIMACEEANGREQLAATLAAMPEMTVEKARPILAAAPLADAGPSLRDQIMA LDEAKGAEAQAEKLAACPGMTVENARAVLAAGSGKAEPVSASTTAMFEHFMANHSPAAVQ GGVAQTSADGDADVNPPPR >gi|296918665|gb|GG773035.1| GENE 4 3310 - 3639 197 109 aa, chain + ## HITS:1 COG:ECs1108 KEGG:ns NR:ns ## COG: ECs1108 COG0616 # Protein_GI_number: 15830362 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli O157:H7 # 1 109 393 501 501 151 96.0 3e-37 MTVEKARPILAASPQADAGPSLRDQIMALDEAKGAEAQAEQLAACPGMTVESARAVLAAG SGKAEPVSASTTALFEHFMANHSPAAVRGGVSQTSADGDADVKMLMAMP >gi|296918665|gb|GG773035.1| GENE 5 3676 - 4023 329 115 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1370 NR:ns ## KEGG: ECS88_1370 # Name: not_defined # Def: head decoration protein (gpD) (major capsid protein D) # Organism: E.coli_S88 # Pathway: not_defined # 1 115 1 115 115 197 99.0 1e-49 MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSPTPALTPLMLDEATGKLVVWDGQKAGS AVGILVLPLEGTETVLTYYKSGTFATEAIRWPDSVDEHKKANAFAGTALSHAALP >gi|296918665|gb|GG773035.1| GENE 6 4081 - 5109 1238 342 aa, chain + ## HITS:1 COG:no KEGG:ECO111_2571 NR:ns ## KEGG: ECO111_2571 # Name: not_defined # Def: putative major capsid protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 342 1 342 342 701 100.0 0 MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPIVEG KVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLNDPAYRRLRIITDNLKQEE HAIVQVEEMQAVNAVLYGKYTMEGDQFDTVEVDFGRSEGNNIEQADGKKWSEQDRDTFDP THDIDLYCDQASGLVNIAIMDGTVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVS FKGYYGDLAIVVAKTSYVAEDGTEKRYLPEGMLVLGNTAAEGIRCYGAIKDAQALSEGVV ASSRYPKHWLTVGDPSCEFTMTQSAPLMVLPDPDEFVVVQVK >gi|296918665|gb|GG773035.1| GENE 7 5161 - 5544 261 127 aa, chain + ## HITS:1 COG:no KEGG:APECO1_402 NR:ns ## KEGG: APECO1_402 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 127 17 143 143 231 100.0 7e-60 MATKEENLNRLRQLADLLGREADMSGSAADIAQRVSEWEEELAVSPEGIMHSDESGADQN HTDDGEQLNNTDAPDDVKAVRVRKCLQVMGYCPETGRPVELALRGMRVLVPSSLATAMIQ HGTAEYA >gi|296918665|gb|GG773035.1| GENE 8 5537 - 5890 189 117 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1373 NR:ns ## KEGG: ECS88_1373 # Name: not_defined # Def: tail attachment protein (minor capsid protein FII) # Organism: E.coli_S88 # Pathway: not_defined # 1 117 13 129 129 227 98.0 1e-58 MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGSEVQGVFDDPESLGFAGGGVRIEG SSPSLFVRTDTVRAVRRGDTLTINGEIFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR >gi|296918665|gb|GG773035.1| GENE 9 5906 - 6439 223 177 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1374 NR:ns ## KEGG: ECS88_1374 # Name: not_defined # Def: minor tail protein Z (GpZ) # Organism: E.coli_S88 # Pathway: not_defined # 1 177 1 177 177 267 100.0 2e-70 MAIKGLDQAIDNLSRVRKNAIPAASAMAINRVATTAINQSSSQVARETKVRRKLVKERSR LKRATVRNPNARIIVNRGDLPVIKLGIRMLGRRPNSILKAGQHRYQRAFIQRLKNGRWHV MQRVAGKNRYPIDVVKIPMAAPLKQAFDENVDRIRRERLPKELAYALKQQLRIAIKR >gi|296918665|gb|GG773035.1| GENE 10 6436 - 6831 469 131 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1352 NR:ns ## KEGG: ECUMN_1352 # Name: not_defined # Def: Minor tail protein U # Organism: E.coli_UMN026 # Pathway: not_defined # 1 131 1 131 131 238 100.0 6e-62 MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLTDAEYTGEELDADTWRA TLHIEVFLPAQVPDSELDQWMESRIYPAMTAIPALAGLITTMVTQGYEYRRDDDMALWSS ADLTYSITYEM >gi|296918665|gb|GG773035.1| GENE 11 6839 - 7591 744 250 aa, chain + ## HITS:1 COG:ECs2169 KEGG:ns NR:ns ## COG: ECs2169 COG5492 # Protein_GI_number: 15831423 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 415 98.0 1e-116 MATPNPLEPVKGAGTTLWVYNGKGDAYANPLSDDDWQRLAKVKDLTPGEMTAESYDDNYL DDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVF RGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVSAIKVTPTSGTVAKGKTTT LTVSFEPESATDKTFRAVSADPSKATISVKDMTITVNGVATGKVQIPVVSGNGQFAAVAE VTVTEAGAAG >gi|296918665|gb|GG773035.1| GENE 12 7605 - 8036 367 143 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E1297 NR:ns ## KEGG: SbBS512_E1297 # Name: not_defined # Def: phage minor tail protein G # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 143 1 143 143 261 100.0 5e-69 MFLKTEQFEYNGVSVTLSELSALQRIEHLALLKRRAEQAESCGNLQVSVEDLVRTGAFLV AMSLWHNHPQKTQSPSMNEAVMKIEQEVLTTWPADAIARAEDVVLCLSGMIEAVRPDTDI TEVAKNNTLTDDDFSAGKSSTAS >gi|296918665|gb|GG773035.1| GENE 13 8087 - 8476 158 129 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_1194 NR:ns ## KEGG: ECH74115_1194 # Name: not_defined # Def: phage tail assembly protein T # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 129 1 129 129 229 100.0 2e-59 MLAGMTSTEYADWHRFYRTHYFQDTQLDMHFSGLTYAVLSLFFCDPDMHPSDFSLLVPRH EEEQVERPDEDKMLMQKAAGLAGGVRFGGDGGRDILSSADVADVMVDDAALMMASAGIPG GVRYVPAGW >gi|296918665|gb|GG773035.1| GENE 14 8457 - 11030 2320 857 aa, chain + ## HITS:1 COG:Z2140 KEGG:ns NR:ns ## COG: Z2140 COG5281 # Protein_GI_number: 15801577 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Escherichia coli O157:H7 EDL933 # 1 857 1 859 859 1318 92.0 0 MSQPVGDLVIDLSLDAVRFDEQMSRVRRHFSGLDTDARKTASAVEQGLSRQALAAQKAGI SVGQYKAAMRTLPAQFTDIATQLAGGQNPWLILLQQGGQVKDSFGGMIPMFRGLAGAITL PMVGVTSLAVATGALAYAWYQGDATLSEFNKTLVLSGNQAGLTADRMLTLSRAGQAAGLT FNQARESLAALVNAGVRGGEQFDAINQSVARFASASGVEVDKVAEAFGKLTTDPTSGLMA MARQFRNVTAEQIAYVAQLQRSGDEAGALQAANDIATKGFDEQTRRLKENMGTLETWADK TGKAFKSMWDAILDIGRPESSADMLASAQKAFDEADKKWQWYQSRSQRRGKTSSFRANLQ GAWDDRENARLGLAAATLQSDMEKAGELAARDRAERESSQLKYTGEAQKAYERLQTPLDK YTARQKELNKALKDGKILQADYNTLMASAKKDYESTLKKPSGVKVSTGERQEDRAHAALL ALETELRTLEKHSGVNEKISQQRRDLWEAESQYVVLKEAATKRQLSEQEKSLLAHEKETL EYKRQLAELGDKIEHQKRLNELAQQAARFEQQQSAKQAAISAKARGLTDRQAQRESEEQR LREVYGDNPAALAKATSALKNTWSAEEQLRGSWMAGMKSGWGEWAESATDSFSQVKSVAT QTFDGIAQNMAAMLTGSEQNWRGFTRSVLSMMTEILLKQAMVGIVGSIGSAIGGAVGGGA SASGGTAIQAAAAKFHFATGGFTGTGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMR GYATGGYVGTPGSLADSRSQASGTFEQNNHVVINNDGTNGQIGPAALKAVYDMARKGARD EIQAQMRDGGLFSGGGR >gi|296918665|gb|GG773035.1| GENE 15 11130 - 11459 223 109 aa, chain + ## HITS:1 COG:ECs1644 KEGG:ns NR:ns ## COG: ECs1644 COG4718 # Protein_GI_number: 15830898 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 187 91.0 3e-48 MKTFRWKVKPGMDVTSAPSVREVRFGDGYSQRAPAGLNADLKTYSVTLSVSREEATALES FLAEHGGWKAFLWTPPYGYRQIKVTCAKWSSQVSMLRVGFSAEFKQVVN >gi|296918665|gb|GG773035.1| GENE 16 11459 - 12157 574 232 aa, chain + ## HITS:1 COG:ECs1645 KEGG:ns NR:ns ## COG: ECs1645 COG4672 # Protein_GI_number: 15830899 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 1 232 1 232 232 466 97.0 1e-131 MQDIRQETLNECTRAEQSASVVLWEIDLTEVGGERYFFCNEQNEKGEPVTWQGRQYQAYP IQGSGFELNGKGTSTRPTLAVSNLYGMVTGMVEDMQSLVGGTVVRRKVYARFLDAVNFVN GNRDADPEQEVISRWRIEQCSELSAVSASFVLSTPTETDGAVFPGRIMLANTCTWTYRGD ECGYHGPAVADEYDQPTSDITKDKCSKCLSGCKFRNNVGNFGGFLSINKLSQ >gi|296918665|gb|GG773035.1| GENE 17 12306 - 12905 308 199 aa, chain + ## HITS:1 COG:ECs1986_2 KEGG:ns NR:ns ## COG: ECs1986_2 COG0791 # Protein_GI_number: 15831240 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli O157:H7 # 56 196 1 141 144 263 87.0 1e-70 MAPEDWLQAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHKFRCVPH LTGRRFEYGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNMEATGFYRVALT EAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHREW HASAFTGICNDLAAASTFV >gi|296918665|gb|GG773035.1| GENE 18 12803 - 13444 568 213 aa, chain + ## HITS:1 COG:ECs0841 KEGG:ns NR:ns ## COG: ECs0841 COG4723 # Protein_GI_number: 15830095 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 213 1 215 215 342 87.0 4e-94 MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSDGWY QVRIAGRDAGETELSSRLNEPLANGAVIHIVPRLAGAKSGGVFQAVLGAALIATAIWMPG ISIAFSDILFSMGAAMTLGGVAQMLAPKARTPRTQTTDNGKQNTYFSSLDNMVAQGNVLP VLYGEMRVGSRVASQEISTADEGDGGQVVVIGR >gi|296918665|gb|GG773035.1| GENE 19 13602 - 13856 80 84 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1384 NR:ns ## KEGG: ECS88_1384 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 84 33 116 116 168 100.0 6e-41 MEGNSLKNIDELSGCISRQWAGNGTPITSLPIENGVSLLVPQAMGGYDVVLDIKKAGNGS SFTLYERVPALTPKIFADSVNACK >gi|296918665|gb|GG773035.1| GENE 20 13923 - 14219 257 98 aa, chain + ## HITS:1 COG:ECs1648 KEGG:ns NR:ns ## COG: ECs1648 COG4733 # Protein_GI_number: 15830902 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 88 1 88 1132 169 98.0 1e-42 MGKGSSKGHTPREARDNLKSTQLLSVIDAISEGPVEGPVDGLKSVLLNSTPVLDSEGNTN ISGVTVVFRAGEQEQTPPEGFESSGSETPPPPSCENGG >gi|296918665|gb|GG773035.1| GENE 21 14203 - 14775 528 190 aa, chain + ## HITS:1 COG:ECs1647 KEGG:ns NR:ns ## COG: ECs1647 COG4723 # Protein_GI_number: 15830901 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 190 34 223 223 301 98.0 4e-82 MKTGAEAIRALATQLPVFRQKLSDGWYQVRIAGRDVSTSGLTAQLHETLPDGAVIHIVPR VAGAKSGGVFQIVLGAAAIAGSFFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQ MLAPKARTPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEG DGGQVVVIGR >gi|296918665|gb|GG773035.1| GENE 22 14836 - 15267 388 143 aa, chain + ## HITS:1 COG:ECs1648 KEGG:ns NR:ns ## COG: ECs1648 COG4733 # Protein_GI_number: 15830902 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 134 1 134 1132 244 94.0 4e-65 MGKGSSKGHTPREAKDNLKSSQMLSVIDAISEGPVEGPVDGLKSVLLNSTPVLDSEGNTN IFGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITRTITSANIDRLRFTFGVQA LVETTSKGAPPPADHPDHHVGKH >gi|296918665|gb|GG773035.1| GENE 23 15302 - 15803 272 167 aa, chain + ## HITS:1 COG:ECs1648 KEGG:ns NR:ns ## COG: ECs1648 COG4733 # Protein_GI_number: 15830902 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 167 122 288 1132 348 98.0 3e-96 METTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTTSQYLASVVVDNLPPRPFNIRM RRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALVGVQVDSEQFGSQQVSRNYHLRGR ILQVPSNYNPQTRQYSGIWDGTFKPAYSNNMAWCLWDMLTHPRYGMG Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:38:07 2011 Seq name: gi|296918664|gb|GG773036.1| Escherichia coli MS 110-3 genomic scaffold Scfld606, whole genome shotgun sequence Length of sequence - 351435 bp Number of predicted genes - 306, with homology - 303 Number of transcription units - 142, operones - 67 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 146 - 205 4.8 1 1 Op 1 18/0.000 + CDS 241 - 729 390 ## COG1286 Uncharacterized membrane protein, required for colicin V production 2 1 Op 2 5/0.179 + CDS 766 - 2283 1557 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 3 1 Op 3 5/0.179 + CDS 2378 - 2947 510 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase + Term 2956 - 2986 3.6 + Prom 2954 - 3013 2.4 4 2 Tu 1 9/0.036 + CDS 3213 - 3995 966 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 4113 - 4156 -0.7 + Prom 4046 - 4105 4.3 5 3 Op 1 12/0.018 + CDS 4216 - 4998 907 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 6 3 Op 2 12/0.018 + CDS 5088 - 5774 667 ## COG4215 ABC-type arginine transport system, permease component 7 3 Op 3 6/0.125 + CDS 5771 - 6487 601 ## COG4160 ABC-type arginine/histidine transport system, permease component 8 3 Op 4 3/0.482 + CDS 6495 - 7268 256 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 7275 - 7310 4.0 + Prom 7376 - 7435 4.0 9 4 Tu 1 . + CDS 7464 - 8354 587 ## COG5464 Uncharacterized conserved protein 10 5 Op 1 3/0.482 - CDS 8402 - 9295 823 ## COG1090 Predicted nucleoside-diphosphate sugar epimerase 11 5 Op 2 3/0.482 - CDS 9316 - 9678 379 ## COG1539 Dihydroneopterin aldolase 12 5 Op 3 . - CDS 9735 - 10382 524 ## COG0625 Glutathione S-transferase - Prom 10411 - 10470 3.7 + Prom 10431 - 10490 2.0 13 6 Op 1 2/0.661 + CDS 10518 - 11162 489 ## COG0625 Glutathione S-transferase 14 6 Op 2 3/0.482 + CDS 11218 - 11769 533 ## COG0622 Predicted phosphoesterase 15 6 Op 3 . + CDS 11827 - 12369 593 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 12369 - 12435 30.0 16 7 Op 1 . - CDS 12468 - 13988 1584 ## COG1288 Predicted membrane protein - Prom 14097 - 14156 5.7 - Term 14100 - 14140 9.2 17 7 Op 2 14/0.000 - CDS 14178 - 16322 2351 ## COG0857 BioD-like N-terminal domain of phosphotransacetylase - Term 16354 - 16393 10.1 18 7 Op 3 . - CDS 16397 - 17599 1311 ## COG0282 Acetate kinase - Prom 17821 - 17880 3.0 + Prom 17720 - 17779 4.8 19 8 Op 1 2/0.661 + CDS 17937 - 18392 299 ## COG3092 Uncharacterized protein conserved in bacteria + Term 18418 - 18448 -0.5 20 8 Op 2 . + CDS 18475 - 18969 618 ## COG3013 Uncharacterized conserved protein 21 8 Op 3 2/0.661 + CDS 18980 - 19630 514 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 19650 - 19679 1.1 + Prom 19632 - 19691 2.9 22 9 Tu 1 . + CDS 19717 - 21549 1559 ## COG0471 Di- and tricarboxylate transporters + Term 21779 - 21814 -0.5 23 10 Op 1 6/0.125 - CDS 21608 - 22207 695 ## COG1896 Predicted hydrolases of HD superfamily - Term 22245 - 22279 3.5 24 10 Op 2 . - CDS 22291 - 23508 1104 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 23560 - 23619 1.9 25 11 Tu 1 . + CDS 24428 - 25366 813 ## COG0583 Transcriptional regulator + Term 25412 - 25451 7.4 - Term 25400 - 25439 7.4 26 12 Tu 1 . - CDS 25569 - 25733 66 ## ECBD_1372 hypothetical protein - Prom 25894 - 25953 3.7 + Prom 25853 - 25912 6.3 27 13 Op 1 30/0.000 + CDS 26002 - 26439 446 ## COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) 28 13 Op 2 9/0.036 + CDS 26455 - 27117 720 ## COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 29 14 Op 1 15/0.000 + CDS 27223 - 29013 2154 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 30 14 Op 2 23/0.000 + CDS 29016 - 29516 440 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 31 14 Op 3 12/0.018 + CDS 29513 - 30850 1389 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 32 14 Op 4 18/0.000 + CDS 30903 - 33629 2857 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 33 14 Op 5 31/0.000 + CDS 33626 - 34603 1196 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 34 14 Op 6 28/0.000 + CDS 34618 - 35160 719 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 35 14 Op 7 30/0.000 + CDS 35172 - 35726 774 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 36 14 Op 8 26/0.000 + CDS 35723 - 36025 457 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 37 14 Op 9 30/0.000 + CDS 36022 - 37863 2287 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit + Prom 37935 - 37994 1.9 38 14 Op 10 22/0.000 + CDS 38027 - 39556 1766 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) 39 14 Op 11 . + CDS 39563 - 41020 1777 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) + Term 41040 - 41081 5.4 - Term 41031 - 41063 3.0 40 15 Op 1 . - CDS 41131 - 41634 527 ## ECS88_2422 hypothetical protein - Prom 41660 - 41719 4.1 41 15 Op 2 . - CDS 41737 - 42708 453 ## COG2234 Predicted aminopeptidases - Prom 42832 - 42891 8.9 + Prom 42643 - 42702 8.1 42 16 Tu 1 . + CDS 42867 - 44588 1296 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain - Term 44586 - 44641 5.2 43 17 Tu 1 . - CDS 44709 - 45626 563 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III - Prom 45652 - 45711 3.0 + Prom 45611 - 45670 2.5 44 18 Op 1 4/0.357 + CDS 45691 - 46152 487 ## COG2153 Predicted acyltransferase 45 18 Op 2 1/0.857 + CDS 46207 - 46512 504 ## COG4575 Uncharacterized conserved protein 46 18 Op 3 10/0.036 + CDS 46591 - 47739 801 ## COG1169 Isochorismate synthase + SSU_RRNA 47731 - 48082 98.0 # AY958844 [D:1..1893] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. + Prom 48008 - 48067 80.4 47 19 Op 1 15/0.000 + CDS 48191 - 49645 1476 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 48 19 Op 2 9/0.036 + CDS 49642 - 50400 434 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 49 19 Op 3 5/0.179 + CDS 50415 - 51272 955 ## COG0447 Dihydroxynaphthoic acid synthase 50 19 Op 4 6/0.125 + CDS 51272 - 52234 998 ## COG1441 O-succinylbenzoate synthase 51 19 Op 5 . + CDS 52231 - 53586 1192 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Prom 53603 - 53662 4.9 52 20 Tu 1 . + CDS 53696 - 53962 166 ## ECS88_2410 polymyxin resistance protein B + Term 54099 - 54142 2.9 53 21 Op 1 9/0.036 - CDS 53956 - 54342 457 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 54 21 Op 2 5/0.179 - CDS 54342 - 54677 409 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 55 21 Op 3 6/0.125 - CDS 54674 - 56326 1478 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 56 21 Op 4 8/0.036 - CDS 56326 - 57216 664 ## COG0726 Predicted xylanase/chitin deacetylase 57 21 Op 5 12/0.018 - CDS 57213 - 59195 1681 ## COG0451 Nucleoside-diphosphate-sugar epimerases 58 21 Op 6 5/0.179 - CDS 59195 - 60163 889 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 59 21 Op 7 . - CDS 60167 - 61324 886 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - Prom 61362 - 61421 7.4 60 22 Tu 1 . + CDS 61614 - 62216 218 ## UTI89_C2534 Ais protein + Term 62227 - 62262 5.1 - Term 62208 - 62251 1.6 61 23 Tu 1 . - CDS 62255 - 62680 354 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 62823 - 62882 6.4 62 24 Op 1 . + CDS 62959 - 63501 671 ## UTI89_C2532 hypothetical protein + Prom 63520 - 63579 4.0 63 24 Op 2 4/0.357 + CDS 63601 - 64803 1133 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA + Prom 64805 - 64864 2.4 64 25 Op 1 5/0.179 + CDS 65023 - 65805 618 ## COG1414 Transcriptional regulator 65 25 Op 2 7/0.071 + CDS 65820 - 67025 1050 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily + Term 67033 - 67074 8.6 66 26 Op 1 6/0.125 + CDS 67082 - 68371 1307 ## COG0477 Permeases of the major facilitator superfamily 67 26 Op 2 . + CDS 68389 - 69192 876 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase + Term 69196 - 69240 4.2 68 27 Op 1 1/0.857 - CDS 69233 - 69418 331 ## COG5464 Uncharacterized conserved protein 69 27 Op 2 3/0.482 - CDS 69431 - 70390 809 ## COG5464 Uncharacterized conserved protein - Prom 70417 - 70476 2.0 - Term 70529 - 70572 7.6 70 28 Op 1 8/0.036 - CDS 70583 - 71773 1151 ## COG0247 Fe-S oxidoreductase 71 28 Op 2 9/0.036 - CDS 71770 - 73029 1151 ## COG3075 Anaerobic glycerol-3-phosphate dehydrogenase 72 28 Op 3 . - CDS 73019 - 74647 1698 ## COG0578 Glycerol-3-phosphate dehydrogenase - Prom 74806 - 74865 3.2 + Prom 74784 - 74843 4.4 73 29 Op 1 6/0.125 + CDS 74920 - 76278 1560 ## COG2271 Sugar phosphate permease 74 29 Op 2 . + CDS 76283 - 77359 1137 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Prom 77374 - 77433 2.7 75 30 Tu 1 . + CDS 77562 - 78212 503 ## ECS88_2385 hypothetical protein - Term 78306 - 78364 7.4 76 31 Op 1 24/0.000 - CDS 78485 - 79615 1477 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 79685 - 79744 6.3 77 31 Op 2 . - CDS 79762 - 82047 2711 ## COG0209 Ribonucleotide reductase, alpha subunit - Prom 82223 - 82282 3.7 + Prom 82917 - 82976 2.1 78 32 Tu 1 . + CDS 83017 - 86487 2604 ## COG3468 Type V secretory pathway, adhesin AidA + Term 86689 - 86736 7.8 - Term 86558 - 86599 1.5 79 33 Tu 1 . - CDS 86627 - 87349 824 ## COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase - Prom 87376 - 87435 5.2 + Prom 87399 - 87458 6.4 80 34 Tu 1 . + CDS 87496 - 90123 3198 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 90145 - 90171 -1.0 + Prom 90138 - 90197 6.6 81 35 Op 1 2/0.661 + CDS 90272 - 91960 1160 ## COG4685 Uncharacterized protein conserved in bacteria 82 35 Op 2 3/0.482 + CDS 91957 - 92352 298 ## COG3234 Uncharacterized protein conserved in bacteria 83 36 Op 1 4/0.357 + CDS 92514 - 97118 4099 ## COG2373 Large extracellular alpha-helical protein 84 36 Op 2 5/0.179 + CDS 97119 - 98768 1116 ## COG5445 Predicted secreted protein 85 36 Op 3 . + CDS 98773 - 99549 482 ## COG4676 Uncharacterized protein conserved in bacteria + Term 99587 - 99624 3.7 - Term 99575 - 99612 3.1 86 37 Op 1 4/0.357 - CDS 99660 - 100844 1290 ## COG0183 Acetyl-CoA acetyltransferase 87 37 Op 2 4/0.357 - CDS 100875 - 102197 1156 ## COG2031 Short chain fatty acids transporter 88 37 Op 3 21/0.000 - CDS 102194 - 102844 544 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 89 37 Op 4 1/0.857 - CDS 102844 - 103506 678 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit - Prom 103605 - 103664 3.7 - Term 103633 - 103690 2.6 90 38 Op 1 13/0.018 - CDS 103702 - 105087 1025 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 91 38 Op 2 . - CDS 105084 - 106910 1339 ## COG0642 Signal transduction histidine kinase + Prom 106934 - 106993 1.9 92 39 Tu 1 . + CDS 107077 - 109926 1909 ## COG0642 Signal transduction histidine kinase + Term 109939 - 110001 8.6 - Term 110039 - 110101 2.9 93 40 Op 1 12/0.018 - CDS 110126 - 110776 790 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 94 40 Op 2 . - CDS 110793 - 113465 2419 ## COG0642 Signal transduction histidine kinase + Prom 114089 - 114148 2.4 95 41 Tu 1 . + CDS 114195 - 115286 1346 ## COG3203 Outer membrane protein (porin) + Term 115301 - 115342 5.0 + Prom 115314 - 115373 2.0 96 42 Op 1 3/0.482 + CDS 115398 - 116453 1255 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 97 42 Op 2 4/0.357 + CDS 116527 - 117591 493 ## COG2169 Adenosine deaminase 98 42 Op 3 4/0.357 + CDS 117591 - 118241 411 ## COG3145 Alkylated DNA repair protein 99 42 Op 4 3/0.482 + CDS 118317 - 119960 195 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 119999 - 120064 20.2 + Prom 119979 - 120038 50.9 100 43 Tu 1 . + CDS 120230 - 121876 1824 ## COG0579 Predicted dehydrogenase 101 44 Tu 1 . - CDS 122026 - 122514 534 ## COG4574 Serine protease inhibitor ecotin 102 45 Op 1 10/0.036 + CDS 123406 - 123669 356 ## COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase 103 45 Op 2 10/0.036 + CDS 123666 - 126188 3175 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 104 45 Op 3 7/0.071 + CDS 126195 - 126890 505 ## COG1145 Ferredoxin 105 45 Op 4 4/0.357 + CDS 126877 - 127740 590 ## COG0348 Polyferredoxin 106 45 Op 5 7/0.071 + CDS 127716 - 128186 436 ## COG3043 Nitrate reductase cytochrome c-type subunit 107 45 Op 6 3/0.482 + CDS 128196 - 128798 537 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 108 45 Op 7 14/0.000 + CDS 128811 - 129434 550 ## COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component 109 45 Op 8 14/0.000 + CDS 129434 - 130093 712 ## COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component 110 45 Op 9 9/0.036 + CDS 130111 - 130872 739 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 111 45 Op 10 9/0.036 + CDS 130869 - 131078 254 ## COG3114 Heme exporter protein D 112 45 Op 11 16/0.000 + CDS 131075 - 131554 645 ## COG2332 Cytochrome c-type biogenesis protein CcmE 113 45 Op 12 11/0.018 + CDS 131551 - 133494 2280 ## COG1138 Cytochrome c biogenesis factor 114 45 Op 13 5/0.179 + CDS 133491 - 134048 689 ## COG0526 Thiol-disulfide isomerase and thioredoxins 115 45 Op 14 . + CDS 134045 - 135097 1141 ## COG4235 Cytochrome c biogenesis factor + Term 135122 - 135148 -0.7 116 46 Tu 1 . - CDS 135143 - 135790 775 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 135865 - 135924 3.3 + Prom 136371 - 136430 3.1 117 47 Tu 1 . + CDS 136461 - 136907 315 ## COG3468 Type V secretory pathway, adhesin AidA + Term 136922 - 136957 -0.5 - TRNA 137009 - 137085 78.0 # Pro GGG 0 0 - Term 136959 - 136998 5.3 118 48 Op 1 8/0.036 - CDS 137160 - 138920 1459 ## COG3083 Predicted hydrolase of alkaline phosphatase superfamily 119 48 Op 2 . - CDS 138940 - 139167 267 ## COG3082 Uncharacterized protein conserved in bacteria - Prom 139239 - 139298 4.6 + Prom 139224 - 139283 6.9 120 49 Tu 1 . + CDS 139349 - 140356 1327 ## COG3081 Nucleoid-associated protein + Term 140448 - 140497 13.7 - Term 140444 - 140476 6.1 121 50 Op 1 . - CDS 140537 - 140917 644 ## PROTEIN SUPPORTED gi|26108973|gb|AAN81176.1|AE016763_135 50S ribosomal protein L25 122 50 Op 2 . - CDS 140946 - 142706 1582 ## COG1061 DNA or RNA helicases of superfamily II - Prom 142765 - 142824 2.7 + Prom 142735 - 142794 3.5 123 51 Op 1 8/0.036 + CDS 142856 - 143551 735 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 124 51 Op 2 . + CDS 143579 - 144769 1233 ## COG0477 Permeases of the major facilitator superfamily + Term 144785 - 144814 0.5 + Prom 144814 - 144873 5.2 125 52 Tu 1 . + CDS 145103 - 145447 254 ## ECO103_2658 hypothetical protein + Term 145483 - 145530 1.9 126 53 Op 1 11/0.018 - CDS 145451 - 147040 332 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 127 53 Op 2 11/0.018 - CDS 147042 - 148067 1083 ## COG4239 ABC-type uncharacterized transport system, permease component 128 53 Op 3 11/0.018 - CDS 148067 - 149161 1416 ## COG4174 ABC-type uncharacterized transport system, permease component 129 53 Op 4 2/0.661 - CDS 149162 - 150976 1496 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 130 53 Op 5 5/0.179 - CDS 151058 - 152614 1046 ## COG2200 FOG: EAL domain - Prom 152645 - 152704 4.1 - Term 152712 - 152749 6.4 131 54 Tu 1 . - CDS 152795 - 153361 358 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 - Prom 153420 - 153479 5.5 132 55 Op 1 3/0.482 - CDS 153773 - 154486 482 ## COG0671 Membrane-associated phospholipid phosphatase 133 55 Op 2 3/0.482 - CDS 154525 - 155511 696 ## COG0523 Putative GTPases (G3E family) - Term 155567 - 155618 2.2 134 56 Tu 1 . - CDS 155629 - 157095 1275 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 157126 - 157185 5.7 - Term 157258 - 157306 5.0 135 57 Tu 1 . - CDS 157318 - 157890 793 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Prom 157820 - 157879 3.4 136 58 Tu 1 . + CDS 158045 - 158299 178 ## COG0727 Predicted Fe-S-cluster oxidoreductase 137 59 Tu 1 . - CDS 158296 - 159477 1098 ## COG0477 Permeases of the major facilitator superfamily - Prom 159626 - 159685 3.4 + Prom 159685 - 159744 3.4 138 60 Op 1 11/0.018 + CDS 159844 - 160974 1409 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain 139 60 Op 2 19/0.000 + CDS 160974 - 161912 990 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 140 60 Op 3 4/0.357 + CDS 161929 - 163620 2064 ## COG1299 Phosphotransferase system, fructose-specific IIC component + Term 163806 - 163841 3.4 + Prom 163920 - 163979 5.2 141 61 Op 1 8/0.036 + CDS 164076 - 165017 515 ## COG0524 Sugar kinases, ribokinase family 142 61 Op 2 4/0.357 + CDS 165005 - 165943 946 ## COG2313 Uncharacterized enzyme involved in pigment biosynthesis + Term 165993 - 166022 1.9 143 62 Tu 1 . + CDS 166037 - 167287 1449 ## COG1972 Nucleoside permease - Term 167171 - 167227 0.4 144 63 Tu 1 . - CDS 167354 - 168052 427 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 168280 - 168339 5.8 + Prom 168057 - 168116 3.5 145 64 Tu 1 . + CDS 168182 - 169123 1002 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Term 169137 - 169180 7.5 146 65 Op 1 3/0.482 - CDS 169391 - 170479 747 ## COG0524 Sugar kinases, ribokinase family 147 65 Op 2 5/0.179 - CDS 170483 - 171340 941 ## COG0648 Endonuclease IV 148 65 Op 3 . - CDS 171414 - 172463 1198 ## COG2855 Predicted membrane protein - Prom 172514 - 172573 9.8 + Prom 172483 - 172542 9.1 149 66 Op 1 . + CDS 172562 - 173443 204 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 + Prom 173561 - 173620 5.3 150 66 Op 2 . + CDS 173648 - 175117 1852 ## COG0833 Amino acid transporters + Term 175139 - 175170 4.1 + Prom 175149 - 175208 7.1 151 67 Tu 1 . + CDS 175328 - 177400 2112 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 177409 - 177439 2.1 - Term 177398 - 177425 1.5 152 68 Tu 1 . - CDS 177432 - 178268 711 ## COG0627 Predicted esterase - Prom 178512 - 178571 3.0 + Prom 178350 - 178409 4.7 153 69 Op 1 4/0.357 + CDS 178526 - 179194 740 ## COG0302 GTP cyclohydrolase I 154 69 Op 2 . + CDS 179211 - 180368 1076 ## COG2311 Predicted membrane protein 155 70 Tu 1 . - CDS 180317 - 180520 81 ## ECS88_2298 hypothetical protein + Prom 180408 - 180467 1.9 156 71 Tu 1 . + CDS 180510 - 181550 981 ## COG1609 Transcriptional regulators + Term 181562 - 181591 -0.2 + Prom 181553 - 181612 5.2 157 72 Op 1 3/0.482 + CDS 181830 - 182555 893 ## COG1879 ABC-type sugar transport system, periplasmic component 158 72 Op 2 16/0.000 + CDS 182591 - 182827 393 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 182836 - 182871 6.1 159 72 Op 3 10/0.036 + CDS 182888 - 184408 192 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 160 72 Op 4 . + CDS 184424 - 185434 1289 ## COG4211 ABC-type glucose/galactose transport system, permease component + Term 185632 - 185685 -0.4 - Term 185530 - 185573 3.9 161 73 Op 1 4/0.357 - CDS 185677 - 186912 1187 ## COG0167 Dihydroorotate dehydrogenase 162 73 Op 2 . - CDS 186906 - 188144 995 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 188263 - 188322 4.5 - Term 188243 - 188285 -0.8 163 74 Op 1 . - CDS 188338 - 188577 260 ## G2583_2688 hypothetical protein 164 74 Op 2 3/0.482 - CDS 188580 - 189299 783 ## COG2949 Uncharacterized membrane protein - Prom 189330 - 189389 3.8 - Term 189353 - 189381 1.6 165 75 Tu 1 . - CDS 189449 - 190333 879 ## COG0295 Cytidine deaminase - Prom 190359 - 190418 4.7 166 76 Op 1 23/0.000 - CDS 190463 - 191158 758 ## COG1346 Putative effector of murein hydrolase 167 76 Op 2 . - CDS 191155 - 191553 382 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 191574 - 191633 3.9 + Prom 191711 - 191770 4.8 168 77 Tu 1 . + CDS 191792 - 192742 986 ## COG0042 tRNA-dihydrouridine synthase + Prom 193241 - 193300 5.8 169 78 Op 1 2/0.661 + CDS 193437 - 194873 1245 ## COG1538 Outer membrane protein 170 78 Op 2 . + CDS 194926 - 195687 196 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Term 195723 - 195786 1.1 171 79 Tu 1 . - CDS 195807 - 196385 657 ## COG0586 Uncharacterized membrane-associated protein - Prom 196486 - 196545 5.2 + Prom 196463 - 196522 3.0 172 80 Tu 1 . + CDS 196555 - 197142 602 ## APECO1_4414 hypothetical protein + Term 197156 - 197202 13.0 + Prom 197186 - 197245 5.1 173 81 Tu 1 . + CDS 197316 - 198248 1077 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 198255 - 198296 7.1 - Term 198242 - 198282 7.6 174 82 Tu 1 . - CDS 198287 - 200002 1615 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 200034 - 200093 4.2 + Prom 199993 - 200052 4.1 175 83 Tu 1 . + CDS 200198 - 202495 2669 ## COG1472 Beta-glucosidase-related glycosidases + Prom 202508 - 202567 3.4 176 84 Op 1 13/0.018 + CDS 202685 - 203602 1047 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 177 84 Op 2 24/0.000 + CDS 203609 - 204766 1273 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 178 84 Op 3 24/0.000 + CDS 204759 - 205685 1139 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components 179 84 Op 4 . + CDS 205690 - 206421 876 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component + Term 206670 - 206709 3.2 - Term 206223 - 206262 -0.7 180 85 Op 1 . - CDS 206402 - 206509 182 ## 181 85 Op 2 . - CDS 206569 - 207300 646 ## COG0789 Predicted transcriptional regulators - Prom 207387 - 207446 4.4 + Prom 207351 - 207410 3.5 182 86 Op 1 9/0.036 + CDS 207522 - 209207 1143 ## COG3275 Putative regulator of cell autolysis 183 86 Op 2 2/0.661 + CDS 209204 - 209923 829 ## COG3279 Response regulator of the LytR/AlgR family 184 86 Op 3 . + CDS 209970 - 210440 453 ## COG4807 Uncharacterized protein conserved in bacteria - Term 210456 - 210487 3.9 185 87 Tu 1 . - CDS 210494 - 210955 543 ## COG4808 Uncharacterized protein conserved in bacteria - Prom 211013 - 211072 1.7 - Term 210973 - 211001 1.6 186 88 Op 1 . - CDS 211080 - 213083 1026 ## COG2801 Transposase and inactivated derivatives 187 88 Op 2 . - CDS 213080 - 214216 915 ## APECO1_4428 hypothetical protein 188 88 Op 3 . - CDS 214209 - 216485 1394 ## ECS88_2263 hypothetical protein 189 88 Op 4 . - CDS 216492 - 217580 1027 ## COG0714 MoxR-like ATPases - Prom 217680 - 217739 9.2 + Prom 217777 - 217836 6.3 190 89 Tu 1 . + CDS 218011 - 218100 73 ## + Term 218124 - 218154 1.1 191 90 Op 1 . - CDS 218491 - 218676 77 ## SF2187 hypothetical protein 192 90 Op 2 . - CDS 218737 - 222369 2535 ## ECS88_2258 hypothetical protein 193 90 Op 3 1/0.857 - CDS 222379 - 226158 2101 ## COG3831 Uncharacterized conserved protein - Prom 226263 - 226322 36.5 194 91 Tu 1 . - CDS 226354 - 228387 2433 ## COG0143 Methionyl-tRNA synthetase - Prom 228469 - 228528 3.6 + Prom 228432 - 228491 2.7 195 92 Tu 1 . + CDS 228519 - 229628 1012 ## COG0489 ATPases involved in chromosome partitioning + Term 229667 - 229730 10.0 + Prom 229673 - 229732 3.6 196 93 Tu 1 . + CDS 229891 - 230172 236 ## ECS88_2254 hypothetical protein + Term 230201 - 230250 11.9 + Prom 230326 - 230385 6.0 197 94 Op 1 7/0.071 + CDS 230465 - 231007 421 ## COG3539 P pilus assembly protein, pilin FimA + Term 231044 - 231077 4.5 + Prom 231009 - 231068 2.8 198 94 Op 2 10/0.036 + CDS 231088 - 231756 442 ## COG3121 P pilus assembly protein, chaperone PapD 199 94 Op 3 . + CDS 231772 - 234252 1383 ## COG3188 P pilus assembly protein, porin PapC + Prom 234287 - 234346 3.9 200 95 Tu 1 . + CDS 234463 - 235302 264 ## E2348C_2254 predicted fimbrial protein-like protein + Term 235358 - 235390 3.0 201 96 Tu 1 . - CDS 235384 - 235722 287 ## COG5455 Predicted integral membrane protein - Prom 235770 - 235829 3.6 - Term 235828 - 235858 1.1 202 97 Tu 1 . - CDS 235941 - 236765 646 ## COG2215 ABC-type uncharacterized transport system, permease component - Prom 236792 - 236851 3.9 + Prom 236803 - 236862 5.0 203 98 Tu 1 . + CDS 236886 - 237158 360 ## COG1937 Uncharacterized protein conserved in bacteria + Prom 237172 - 237231 3.2 204 99 Op 1 12/0.018 + CDS 237462 - 238169 460 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 205 99 Op 2 2/0.661 + CDS 238166 - 238966 644 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 206 99 Op 3 2/0.661 + CDS 239031 - 239849 636 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 207 99 Op 4 . + CDS 239901 - 240647 565 ## COG2188 Transcriptional regulators - Term 240528 - 240584 11.1 208 100 Op 1 5/0.179 - CDS 240621 - 241586 829 ## COG0524 Sugar kinases, ribokinase family 209 100 Op 2 4/0.357 - CDS 241583 - 242587 1012 ## COG1397 ADP-ribosylglycohydrolase 210 100 Op 3 . - CDS 242584 - 243858 1367 ## COG0477 Permeases of the major facilitator superfamily - Prom 243893 - 243952 2.2 + Prom 243909 - 243968 4.4 211 101 Tu 1 . + CDS 244115 - 245167 1073 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes + Term 245252 - 245283 3.2 + Prom 245271 - 245330 6.0 212 102 Op 1 . + CDS 245396 - 246250 606 ## COG0191 Fructose/tagatose bisphosphate aldolase 213 102 Op 2 4/0.357 + CDS 246279 - 247541 1064 ## COG4573 Predicted tagatose 6-phosphate kinase 214 102 Op 3 13/0.018 + CDS 247551 - 248003 208 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 215 102 Op 4 10/0.036 + CDS 248034 - 248318 288 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 216 102 Op 5 7/0.071 + CDS 248322 - 249677 1513 ## COG3775 Phosphotransferase system, galactitol-specific IIC component + Term 249689 - 249717 0.6 217 102 Op 6 3/0.482 + CDS 249725 - 250765 727 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Prom 250767 - 250826 54.7 218 103 Tu 1 . + CDS 250925 - 251698 568 ## COG1349 Transcriptional regulators of sugar metabolism + Term 251703 - 251762 0.4 219 104 Tu 1 . - CDS 251780 - 252679 651 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 252706 - 252765 3.3 + Prom 252995 - 253054 6.2 220 105 Tu 1 . + CDS 253137 - 253412 175 ## APECO1_4457 hypothetical protein + Term 253443 - 253475 -0.6 - Term 253736 - 253775 5.1 221 106 Tu 1 . - CDS 253912 - 255273 1539 ## COG0826 Collagenase and related proteases - Prom 255348 - 255407 3.9 + Prom 255810 - 255869 3.5 222 107 Op 1 . + CDS 255923 - 256975 242 ## ECS88_2183 hypothetical protein 223 107 Op 2 . + CDS 256975 - 257691 414 ## ECS88_2182 hypothetical protein 224 107 Op 3 . + CDS 257702 - 259810 521 ## ECS88_2181 hypothetical protein 225 107 Op 4 . + CDS 259871 - 260476 410 ## ECS88_2180 hypothetical protein - Term 260555 - 260593 3.3 226 108 Tu 1 . - CDS 260601 - 260933 365 ## COG3422 Uncharacterized conserved protein 227 109 Op 1 40/0.000 - CDS 261113 - 261835 792 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 228 109 Op 2 10/0.036 - CDS 261832 - 263235 1177 ## COG0642 Signal transduction histidine kinase 229 109 Op 3 5/0.179 - CDS 263232 - 264647 1422 ## COG0477 Permeases of the major facilitator superfamily 230 109 Op 4 10/0.036 - CDS 264648 - 267725 3106 ## COG0841 Cation/multidrug efflux pump 231 109 Op 5 27/0.000 - CDS 267726 - 270848 3449 ## COG0841 Cation/multidrug efflux pump 232 109 Op 6 . - CDS 270848 - 272095 1417 ## COG0845 Membrane-fusion protein - Prom 272167 - 272226 3.4 - Term 272422 - 272473 0.1 233 110 Tu 1 . - CDS 272593 - 272721 65 ## - Prom 272796 - 272855 4.4 + Prom 272887 - 272946 3.3 234 111 Op 1 . + CDS 272976 - 273635 548 ## COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 235 111 Op 2 . + CDS 273713 - 274393 524 ## ECS88_2171 hypothetical protein 236 111 Op 3 . + CDS 274390 - 276330 937 ## COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains + Term 276554 - 276591 -0.3 237 112 Tu 1 . - CDS 276343 - 277695 1450 ## COG0443 Molecular chaperone - Prom 277723 - 277782 4.1 238 113 Op 1 . + CDS 277708 - 277860 87 ## gi|323977771|gb|EGB72857.1| 3MG2 DNA-3-methyladenine glycosylase 2 239 113 Op 2 . + CDS 277829 - 278677 726 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 240 114 Tu 1 . - CDS 278788 - 282105 2732 ## COG2202 FOG: PAS/PAC domain - Prom 282167 - 282226 4.6 + Prom 282167 - 282226 4.0 241 115 Op 1 4/0.357 + CDS 282423 - 283064 613 ## COG0572 Uridine kinase 242 115 Op 2 4/0.357 + CDS 283156 - 283779 729 ## COG0717 Deoxycytidine deaminase 243 115 Op 3 . + CDS 283801 - 285654 1326 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis + Term 285664 - 285709 9.5 244 116 Op 1 5/0.179 - CDS 285707 - 285997 264 ## COG5606 Uncharacterized conserved small protein 245 116 Op 2 1/0.857 - CDS 285987 - 286325 299 ## COG4679 Phage-related protein - Term 286350 - 286392 9.3 246 116 Op 3 . - CDS 286400 - 287983 1824 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 288203 - 288262 4.7 + Prom 288498 - 288557 6.0 247 117 Op 1 6/0.125 + CDS 288726 - 289781 980 ## COG1596 Periplasmic protein involved in polysaccharide export 248 117 Op 2 3/0.482 + CDS 289787 - 290230 442 ## COG0394 Protein-tyrosine-phosphatase 249 117 Op 3 2/0.661 + CDS 290233 - 292395 2629 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis 250 118 Op 1 4/0.357 + CDS 292524 - 293363 707 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 251 118 Op 2 5/0.179 + CDS 293366 - 293854 549 ## COG1045 Serine acetyltransferase 252 118 Op 3 . + CDS 293851 - 295068 1206 ## COG0438 Glycosyltransferase 253 118 Op 4 . + CDS 295043 - 296260 895 ## ECUMN_2392 putative colanic acid biosynthesis protein 254 118 Op 5 7/0.071 + CDS 296271 - 297017 648 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 255 118 Op 6 5/0.179 + CDS 297033 - 297581 300 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 256 118 Op 7 14/0.000 + CDS 297608 - 298729 1359 ## COG1089 GDP-D-mannose dehydratase 257 118 Op 8 3/0.482 + CDS 298732 - 299697 989 ## COG0451 Nucleoside-diphosphate-sugar epimerases 258 118 Op 9 6/0.125 + CDS 299700 - 300200 396 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 259 118 Op 10 5/0.179 + CDS 300197 - 301420 1239 ## COG0438 Glycosyltransferase 260 118 Op 11 11/0.018 + CDS 301423 - 302859 1618 ## COG0836 Mannose-1-phosphate guanylyltransferase + Prom 302899 - 302958 5.4 261 119 Tu 1 . + CDS 303052 - 304422 1586 ## COG1109 Phosphomannomutase 262 120 Op 1 7/0.071 + CDS 304558 - 305952 1371 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 263 120 Op 2 4/0.357 + CDS 305954 - 307432 1829 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 264 120 Op 3 7/0.071 + CDS 307504 - 308784 1380 ## COG2327 Uncharacterized conserved protein 265 120 Op 4 . + CDS 308781 - 310001 1024 ## COG0438 Glycosyltransferase 266 120 Op 5 . + CDS 310012 - 311406 740 ## EcE24377A_2335 putative colanic acid biosynthesis protein + Prom 311497 - 311556 5.5 267 121 Tu 1 . + CDS 311581 - 312474 882 ## COG1210 UDP-glucose pyrophosphorylase + Term 312567 - 312610 -0.3 + Prom 312572 - 312631 4.5 268 122 Op 1 11/0.018 + CDS 312847 - 313932 707 ## COG1088 dTDP-D-glucose 4,6-dehydratase 269 122 Op 2 11/0.018 + CDS 313932 - 314831 488 ## COG1091 dTDP-4-dehydrorhamnose reductase 270 122 Op 3 . + CDS 314890 - 315765 753 ## COG1209 dTDP-glucose pyrophosphorylase 271 122 Op 4 . + CDS 315783 - 316193 234 ## PC1_1300 WxcM domain protein domain protein 272 122 Op 5 9/0.036 + CDS 316180 - 316647 167 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 273 122 Op 6 6/0.125 + CDS 316640 - 317746 494 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis + Prom 317985 - 318044 33.4 274 123 Tu 1 . + CDS 318280 - 319056 58 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid + Term 319166 - 319216 3.1 + Prom 319747 - 319806 4.6 275 124 Op 1 . + CDS 319829 - 320122 240 ## gi|315285629|gb|EFU45071.1| hypothetical protein HMPREF9539_04415 276 124 Op 2 1/0.857 + CDS 320143 - 320700 170 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes + Term 320701 - 320758 5.2 + Prom 321626 - 321685 8.0 277 125 Tu 1 . + CDS 321724 - 322611 43 ## COG1216 Predicted glycosyltransferases + Term 322707 - 322747 0.4 + Prom 323029 - 323088 7.9 278 126 Tu 1 . + CDS 323272 - 323718 275 ## COG0438 Glycosyltransferase + Prom 323817 - 323876 7.4 279 127 Tu 1 . + CDS 323897 - 324451 336 ## COG5433 Transposase + Prom 325113 - 325172 11.8 280 128 Tu 1 . + CDS 325321 - 325788 -118 ## COG5433 Transposase + Term 325881 - 325927 -0.8 + Prom 326371 - 326430 8.6 281 129 Tu 1 . + CDS 326628 - 328025 222 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily + Prom 328033 - 328092 7.1 282 130 Tu 1 . + CDS 328161 - 329567 1830 ## COG0362 6-phosphogluconate dehydrogenase + Term 329594 - 329626 3.5 + Prom 329596 - 329655 17.3 283 131 Op 1 2/0.661 + CDS 329856 - 331022 818 ## COG1004 Predicted UDP-glucose 6-dehydrogenase + Prom 331043 - 331102 5.8 284 131 Op 2 . + CDS 331167 - 332147 1017 ## COG3765 Chain length determinant protein + Term 332170 - 332206 5.1 - Term 332244 - 332282 -0.7 285 132 Op 1 24/0.000 - CDS 332330 - 332941 733 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 286 132 Op 2 23/0.000 - CDS 332935 - 333711 855 ## COG0107 Imidazoleglycerol-phosphate synthase 287 132 Op 3 25/0.000 - CDS 333693 - 334430 787 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 288 132 Op 4 18/0.000 - CDS 334430 - 335020 668 ## COG0118 Glutamine amidotransferase 289 132 Op 5 13/0.018 - CDS 335020 - 336087 1245 ## COG0131 Imidazoleglycerol-phosphate dehydratase 290 132 Op 6 19/0.000 - CDS 336087 - 337157 1094 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 291 132 Op 7 18/0.000 - CDS 337154 - 338458 1183 ## COG0141 Histidinol dehydrogenase 292 132 Op 8 . - CDS 338464 - 339363 1109 ## COG0040 ATP phosphoribosyltransferase - Prom 339403 - 339462 37.1 + Prom 339795 - 339854 8.2 293 133 Op 1 6/0.125 + CDS 339874 - 340125 294 ## COG2161 Antitoxin of toxin-antitoxin stability system 294 133 Op 2 . + CDS 340122 - 340376 96 ## COG4115 Uncharacterized protein conserved in bacteria + Term 340378 - 340415 2.4 295 134 Op 1 2/0.661 + CDS 340459 - 341283 765 ## COG0451 Nucleoside-diphosphate-sugar epimerases 296 134 Op 2 4/0.357 + CDS 341329 - 342258 870 ## COG0583 Transcriptional regulator + Term 342347 - 342379 2.3 + Prom 342267 - 342326 4.2 297 135 Tu 1 . + CDS 342525 - 343883 1563 ## COG0531 Amino acid transporters + Term 343927 - 343959 3.0 - Term 343914 - 343947 2.4 298 136 Tu 1 . - CDS 343957 - 345384 1160 ## COG2925 Exonuclease I - Prom 345628 - 345687 2.9 + Prom 345585 - 345644 3.9 299 137 Tu 1 . + CDS 345716 - 346759 873 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Prom 346783 - 346842 6.3 300 138 Tu 1 . + CDS 346878 - 347351 402 ## COG3449 DNA gyrase inhibitor + Term 347441 - 347475 1.1 + Prom 347363 - 347422 3.8 301 139 Tu 1 2/0.661 + CDS 347549 - 348607 925 ## COG1289 Predicted membrane protein + Prom 348615 - 348674 3.9 302 140 Tu 1 . + CDS 348779 - 349108 513 ## COG2926 Uncharacterized protein conserved in bacteria + Term 349125 - 349159 6.9 - Term 349813 - 349851 5.0 303 141 Op 1 . - CDS 350006 - 350197 305 ## ECP_2049 hypothetical protein 304 141 Op 2 . - CDS 350197 - 350571 282 ## JW1987 toxin of the YeeV-YeeU toxin-antitoxin system 305 141 Op 3 . - CDS 350660 - 350908 235 ## ECP_2047 YagB/YeeU/YfjZ family; region: YagB_YeeU_YfjZ; pfam06154 306 142 Tu 1 . - CDS 351102 - 351323 323 ## EC55989_2261 conserved hypothetical protein; CP4-44 prophage Predicted protein(s) >gi|296918664|gb|GG773036.1| GENE 1 241 - 729 390 162 aa, chain + ## HITS:1 COG:cvpA KEGG:ns NR:ns ## COG: cvpA COG1286 # Protein_GI_number: 16130248 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Escherichia coli K12 # 1 162 1 162 162 265 98.0 2e-71 MVWIDYAIIAVIAFSSLVSLIRGFVREVLSLVTWGCAFFVASHYYTYLSVWFTGFEDELV RNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFL DSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLPRA >gi|296918664|gb|GG773036.1| GENE 2 766 - 2283 1557 505 aa, chain + ## HITS:1 COG:ECs3196 KEGG:ns NR:ns ## COG: ECs3196 COG0034 # Protein_GI_number: 15832450 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Escherichia coli O157:H7 # 1 505 1 505 505 1027 100.0 0 MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARH MQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKR RHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMV AFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLF TRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVI PIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRD KNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHG REVDEIRQIIGADGLIFQDLNDLIEAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLD TLRNDDAKAVQRQNEVENLEMHNEG >gi|296918664|gb|GG773036.1| GENE 3 2378 - 2947 510 189 aa, chain + ## HITS:1 COG:ECs3195 KEGG:ns NR:ns ## COG: ECs3195 COG0163 # Protein_GI_number: 15832449 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Escherichia coli O157:H7 # 1 189 1 189 189 355 99.0 3e-98 MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALAD VTHDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVL CVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAVTLPE DLFARWQGA >gi|296918664|gb|GG773036.1| GENE 4 3213 - 3995 966 260 aa, chain + ## HITS:1 COG:argT KEGG:ns NR:ns ## COG: argT COG0834 # Protein_GI_number: 16130245 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 260 1 260 260 462 98.0 1e-130 MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC KRMQVKCTWVASDFDALIPSLKAKKIDTIISSLSITDKRQQEIAFSDKLYAADSRLIAAK GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA LQDEVAASEGFLKQPAGKDFAFAGPSVKDKKYFGDGTGVGLRKDDAELTAAFNKALNELR QDGTYDKMAKKYFDFNVYGD >gi|296918664|gb|GG773036.1| GENE 5 4216 - 4998 907 260 aa, chain + ## HITS:1 COG:ECs3193 KEGG:ns NR:ns ## COG: ECs3193 COG0834 # Protein_GI_number: 15832447 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 24 260 24 260 260 464 99.0 1e-130 MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVGFDIDLAKELC KRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAK NSDIQPTVESLKGKRIGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAA FQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMR ADGTYEKLAKKYFDFDVYGG >gi|296918664|gb|GG773036.1| GENE 6 5088 - 5774 667 228 aa, chain + ## HITS:1 COG:hisQ KEGG:ns NR:ns ## COG: hisQ COG4215 # Protein_GI_number: 16130243 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Escherichia coli K12 # 1 228 1 228 228 392 99.0 1e-109 MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVP DLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVP KGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKAT QLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFIERRYSVGVKRADL >gi|296918664|gb|GG773036.1| GENE 7 5771 - 6487 601 238 aa, chain + ## HITS:1 COG:ECs3191 KEGG:ns NR:ns ## COG: ECs3191 COG4160 # Protein_GI_number: 15832445 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 434 100.0 1e-122 MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFLAIGRVSSNKYIQFPIW LFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEI FAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTA TVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKRWLQHVKPSSTH >gi|296918664|gb|GG773036.1| GENE 8 6495 - 7268 256 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 20 232 20 221 223 103 34 1e-20 MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEG SIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQV LGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPT SALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGAPEQLF GNPQSPRLQQFLKGSLK >gi|296918664|gb|GG773036.1| GENE 9 7464 - 8354 587 296 aa, chain + ## HITS:1 COG:ECs3189 KEGG:ns NR:ns ## COG: ECs3189 COG5464 # Protein_GI_number: 15832443 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 578 97.0 1e-165 MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDEDLRQY YSDLLWSVKTQEGAGYIYVVIEHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVIPM LFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDITVVPDDEIMQHRKMALLELIQ KHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDARRFRAFIGEIAERAPQEK EKLMTIADRLREEGAMQGKHEEALRIAQEMMEKGFDHEVILTLTRLSPDDLIAPSH >gi|296918664|gb|GG773036.1| GENE 10 8402 - 9295 823 297 aa, chain - ## HITS:1 COG:yfcH KEGG:ns NR:ns ## COG: yfcH COG1090 # Protein_GI_number: 16130239 # Func_class: R General function prediction only # Function: Predicted nucleoside-diphosphate sugar epimerase # Organism: Escherichia coli K12 # 1 297 1 297 297 600 98.0 1e-172 MNIVITGGTGLIGRYLIPRLLDLGHQITVVTRNPQKASSVLGPRVTLWQGLAGQSNLNGV DAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGD LGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDGGILGKMLPP FRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRGPFNMVSPYPVRNEQFAHALGHA LHRPAILRVPATAIRLLMGESSVLVLGGQRALPKKLEEAGFAFRWYDLEEALADVVR >gi|296918664|gb|GG773036.1| GENE 11 9316 - 9678 379 120 aa, chain - ## HITS:1 COG:ECs3187 KEGG:ns NR:ns ## COG: ECs3187 COG1539 # Protein_GI_number: 15832441 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Escherichia coli O157:H7 # 1 120 1 120 120 211 100.0 2e-55 MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADKARTSEDINDALNYRTV TKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDKLHALRYADSVSMTLSWQR >gi|296918664|gb|GG773036.1| GENE 12 9735 - 10382 524 215 aa, chain - ## HITS:1 COG:ECs3186 KEGG:ns NR:ns ## COG: ECs3186 COG0625 # Protein_GI_number: 15832440 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 434 98.0 1e-122 MIDLYFAPTPNGHKITLFLEEAGLDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSP ADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAVTLQWLFWQVGGLGPMLGQNHHFNH AAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDL AMYPAVKNWHERIRSRPATGLALLKAQHGDERSDS >gi|296918664|gb|GG773036.1| GENE 13 10518 - 11162 489 214 aa, chain + ## HITS:1 COG:yfcF KEGG:ns NR:ns ## COG: yfcF COG0625 # Protein_GI_number: 16130236 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 214 1 214 214 417 99.0 1e-117 MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVP LLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREER PTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLALGQPNLFGEWCIADTDLALMINRLVL HGDEVPERLVDYATFQWQRASVQRFIALSAKQSG >gi|296918664|gb|GG773036.1| GENE 14 11218 - 11769 533 183 aa, chain + ## HITS:1 COG:ECs3184 KEGG:ns NR:ns ## COG: ECs3184 COG0622 # Protein_GI_number: 15832438 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Escherichia coli O157:H7 # 1 183 2 184 184 361 99.0 1e-100 MKLMFASDIHGSLPATERVLELFVQSGAQWLVILGDVLNHGPRNALPEGYAPAKVAERLN EVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQND VLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGMLDNDVLSVIALNDQSIIAQVA INP >gi|296918664|gb|GG773036.1| GENE 15 11827 - 12369 593 180 aa, chain + ## HITS:1 COG:ECs3183 KEGG:ns NR:ns ## COG: ECs3183 COG0494 # Protein_GI_number: 15832437 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 180 1 180 180 329 100.0 1e-90 MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVVHDGMGKILVQRRTETK DFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRVWGALF SCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNAKNEAVETETAE >gi|296918664|gb|GG773036.1| GENE 16 12468 - 13988 1584 506 aa, chain - ## HITS:1 COG:yfcC KEGG:ns NR:ns ## COG: yfcC COG1288 # Protein_GI_number: 16130233 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 506 8 513 513 921 99.0 0 MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVV DPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIG GAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSLGGAIFGMGEEAVAFAIIIAP LMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIAT LIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWV IWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLV GFAKGILLLVGNGEAGDASVLNTILNSIANAISGLDNAVAAWFMLLFQAVFNFFVTSGSG QAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLK VGATLLGLLFIMSSVVVIGAQLMGYH >gi|296918664|gb|GG773036.1| GENE 17 14178 - 16322 2351 714 aa, chain - ## HITS:1 COG:Zpta_1 KEGG:ns NR:ns ## COG: Zpta_1 COG0857 # Protein_GI_number: 15802844 # Func_class: R General function prediction only # Function: BioD-like N-terminal domain of phosphotransacetylase # Organism: Escherichia coli O157:H7 EDL933 # 1 391 1 391 391 751 99.0 0 MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRTGGDAPDQTTTIVRAN SSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIIANYHANTKDAEVVLVEGLVPTRKHQFAQ SLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFGGAKNTNITGVIVNKLNAPVD EQGRTRPDLSEIFDDSTKAKVNNVDPAKLQESSPLPVLGAVPWSFDLIATRAIDMARHLN ATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSLLVTSADRPDVLVAACLAAMNGVEI GALLLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTSLSLQSFNLEVPVDDHERIEK VQEYVANYINADWIDSLTATSERSRRLSPPAFRYQLTELARKAGKRIVLPEGDEPRTVKA AAICAERGIATCVLLGNPAEINRVAASQGVELGAGIEIVDPEVVRENYVGRLVELRKNKG MTETVAREQLEDNVVLGTLMLEQDEVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSV FFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGS DVEKVREATRLAQEKRPDLMIDGPLQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTG NTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ >gi|296918664|gb|GG773036.1| GENE 18 16397 - 17599 1311 400 aa, chain - ## HITS:1 COG:ECs3180 KEGG:ns NR:ns ## COG: ECs3180 COG0282 # Protein_GI_number: 15832434 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 803 100.0 0 MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARIKWKMDGNKQEAALGAG AAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSSVVIDESVIQGIKDAASFA PLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEESYLYALPYNLYKEHGIRRYG AHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVSAIRNGKCVDTSMGLTPLEGLVM GTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGLLGLTEVTSDCRYVEDNYATKEDAK RAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGIGENAAMVRELSLGKLGVLGFEVDHER NLAARFGKSGFINKEGTRPAVVIPTNEELVIAQDASRLTA >gi|296918664|gb|GG773036.1| GENE 19 17937 - 18392 299 151 aa, chain + ## HITS:1 COG:yfbV KEGG:ns NR:ns ## COG: yfbV COG3092 # Protein_GI_number: 16130230 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 151 1 151 151 294 98.0 5e-80 MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTCYAIRFMPPIAVFTLC WQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYDVRGKLQESGQVL APVEGKPDYQALADTLKRAFKQLDKTFLDDL >gi|296918664|gb|GG773036.1| GENE 20 18475 - 18969 618 164 aa, chain + ## HITS:1 COG:ECs3178 KEGG:ns NR:ns ## COG: ECs3178 COG3013 # Protein_GI_number: 15832432 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 164 7 170 170 318 100.0 3e-87 MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQMRELDREFGELKEETCR TIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEARYLGYVRFMVNVEGRYTHF DAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQIINA >gi|296918664|gb|GG773036.1| GENE 21 18980 - 19630 514 216 aa, chain + ## HITS:1 COG:ECs3177 KEGG:ns NR:ns ## COG: ECs3177 COG0637 # Protein_GI_number: 15832431 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 394 99.0 1e-110 MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLSPEEVLAFIHGKQAITSLRHFMAGKS EADIAAEFTRLEHIEATETEGITALPGAIALLNHLNKAGIPWAIVTSGSMPVARARHKIA GLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIA VNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ >gi|296918664|gb|GG773036.1| GENE 22 19717 - 21549 1559 610 aa, chain + ## HITS:1 COG:ECs3176 KEGG:ns NR:ns ## COG: ECs3176 COG0471 # Protein_GI_number: 15832430 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 610 1 610 610 1085 100.0 0 MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLTVPEVFSGFSDPNVVLI AALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIP VVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGYHGFSFFSVTP IGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFRDLIREYRLTGRARRLAIRPGSP MIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAADVDLRQ FCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPESELIGKSVREIGFRTRYGLNVVGLKR NGVALEGSLADEPLLLGDIILVVGNWKLIGMLAKQGRDFVALNLPEEVSEASPAHSQAPH AIFCLVLMVALMLTDEIPNPVAAIIACLLMGKFRCIDAESAYKSIHWPSIILIVGMMPFA VALQKTGGVALAVKGLMDIGGGYGPHMMLGCLFVLSAVIGLFISNTATAVLMAPIALAAA KTMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVC VVMIPMLFPF >gi|296918664|gb|GG773036.1| GENE 23 21608 - 22207 695 199 aa, chain - ## HITS:1 COG:ECs3175 KEGG:ns NR:ns ## COG: ECs3175 COG1896 # Protein_GI_number: 15832429 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Escherichia coli O157:H7 # 1 199 1 199 199 370 99.0 1e-103 MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAER IALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELQDIFAPLI DEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFME VFVPSFHLSLDEISQDSPL >gi|296918664|gb|GG773036.1| GENE 24 22291 - 23508 1104 405 aa, chain - ## HITS:1 COG:yfbQ KEGG:ns NR:ns ## COG: yfbQ COG0436 # Protein_GI_number: 16130225 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 405 1 405 405 853 100.0 0 MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIR NLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGD EMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNP TGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSK TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFI TPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEK VLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLSGYHQL >gi|296918664|gb|GG773036.1| GENE 25 24428 - 25366 813 312 aa, chain + ## HITS:1 COG:lrhA KEGG:ns NR:ns ## COG: lrhA COG0583 # Protein_GI_number: 16130224 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 312 1 312 312 598 99.0 1e-171 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSTFKALNLRTSPTHWYCAAEYV LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPE GDDSLLIERDIE >gi|296918664|gb|GG773036.1| GENE 26 25569 - 25733 66 54 aa, chain - ## HITS:1 COG:no KEGG:ECBD_1372 NR:ns ## KEGG: ECBD_1372 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 54 1 54 54 92 96.0 4e-18 MLLNRVRCEAMEKIRVYFDRNLCRFLPPKESIFLICDTLLSFYNKNAATNSRIF >gi|296918664|gb|GG773036.1| GENE 27 26002 - 26439 446 145 aa, chain + ## HITS:1 COG:ECs3172 KEGG:ns NR:ns ## COG: ECs3172 COG0838 # Protein_GI_number: 15832426 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 3 (chain A) # Organism: Escherichia coli O157:H7 # 1 145 3 147 147 266 100.0 9e-72 MSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARSKNVPFESGIDSVGSARL RLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGA LDWTPARSRRERMNPETNSIANRQR >gi|296918664|gb|GG773036.1| GENE 28 26455 - 27117 720 220 aa, chain + ## HITS:1 COG:ECs3171 KEGG:ns NR:ns ## COG: ECs3171 COG0377 # Protein_GI_number: 15832425 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 # 1 220 1 220 220 457 100.0 1e-129 MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEP KWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER RPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI >gi|296918664|gb|GG773036.1| GENE 29 27223 - 29013 2154 596 aa, chain + ## HITS:1 COG:nuoC_2 KEGG:ns NR:ns ## COG: nuoC_2 COG0649 # Protein_GI_number: 16130221 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Escherichia coli K12 # 198 596 1 399 399 843 99.0 0 MTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFL KKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHV PTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE LTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVD CVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVN VIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFR IGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGT TGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQC LNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMVEATKGIN SYYLTSDGSTMSYRTRIRTPSYAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR >gi|296918664|gb|GG773036.1| GENE 30 29016 - 29516 440 166 aa, chain + ## HITS:1 COG:nuoE KEGG:ns NR:ns ## COG: nuoE COG1905 # Protein_GI_number: 16130220 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Escherichia coli K12 # 1 166 1 166 166 340 100.0 8e-94 MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIAD VLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQT TFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPELLERYK >gi|296918664|gb|GG773036.1| GENE 31 29513 - 30850 1389 445 aa, chain + ## HITS:1 COG:nuoF KEGG:ns NR:ns ## COG: nuoF COG1894 # Protein_GI_number: 16130219 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Escherichia coli K12 # 1 445 1 445 445 921 99.0 0 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDSGLK GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC GEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE AGIKQPFSNTHLINGIQPNLLKERW >gi|296918664|gb|GG773036.1| GENE 32 30903 - 33629 2857 908 aa, chain + ## HITS:1 COG:ECs3167 KEGG:ns NR:ns ## COG: ECs3167 COG1034 # Protein_GI_number: 15832421 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Escherichia coli O157:H7 # 1 908 3 910 910 1893 99.0 0 MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTR GRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVM TGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYYKDYADGTDLGVYGAHDNVY FGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWDMQFAPSICQQCSIGCNISPG ERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDFITLNAEQAMQ GAADILRQSKKVIGIGSPRASVESNFALRELVGEENFYTGIAHGEQERLQLALKVLREGG IYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAVKGKAREMAAAQKVADWQIAAILN IGQRAKHPLFVTNVDDTRLDDIAAWTYRAPVEDQARLGFAIAHALDNSAPAVDGIEPELQ SKIDVIVQALAGAKKPLIISGTNAGSAEVIQAAANVAKALKGRGADVGITMIARSVNSMG LGIMGGGSLEEALTELETGRADAVVVLENDLHRHASATRVNAALAKAPLVMVVDHQRTAI MENAHLVLSAASFAESDGTVINNEGRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLL SREVDWTQLDHVIDAVVAKIPELAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANIS VHEPRQPQDIDTMFTFSMEGNNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGD PGVRLFETSENGLDYFTSVPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYI KLNPADAAKLGVNAGTRVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHL EDLKEAQQ >gi|296918664|gb|GG773036.1| GENE 33 33626 - 34603 1196 325 aa, chain + ## HITS:1 COG:ECs3166 KEGG:ns NR:ns ## COG: ECs3166 COG1005 # Protein_GI_number: 15832420 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Escherichia coli O157:H7 # 1 325 1 325 325 593 99.0 1e-169 MSWISPELIEILLTVLKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQL VADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFL MMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIV NSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG EYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSF GWKICLPLTLINLLVTAAVILWQAQ >gi|296918664|gb|GG773036.1| GENE 34 34618 - 35160 719 180 aa, chain + ## HITS:1 COG:ECs3165 KEGG:ns NR:ns ## COG: ECs3165 COG1143 # Protein_GI_number: 15832419 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Escherichia coli O157:H7 # 1 180 1 180 180 371 100.0 1e-103 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP >gi|296918664|gb|GG773036.1| GENE 35 35172 - 35726 774 184 aa, chain + ## HITS:1 COG:ECs3164 KEGG:ns NR:ns ## COG: ECs3164 COG0839 # Protein_GI_number: 15832418 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Escherichia coli O157:H7 # 1 184 1 184 184 317 100.0 7e-87 MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYA GAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQGID GTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAGEVLSNRKDDSAKRKT EEHA >gi|296918664|gb|GG773036.1| GENE 36 35723 - 36025 457 100 aa, chain + ## HITS:1 COG:ECs3163 KEGG:ns NR:ns ## COG: ECs3163 COG0713 # Protein_GI_number: 15832417 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Escherichia coli O157:H7 # 1 100 1 100 100 148 100.0 3e-36 MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASALAFVVAGSYWGQTDGQV MYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG >gi|296918664|gb|GG773036.1| GENE 37 36022 - 37863 2287 613 aa, chain + ## HITS:1 COG:ECs3162 KEGG:ns NR:ns ## COG: ECs3162 COG1009 # Protein_GI_number: 15832416 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Escherichia coli O157:H7 # 1 613 1 613 613 1052 100.0 0 MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQAY SQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYT NLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVF LAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLA DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALV QTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQ NIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLV GAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLP QTTELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTLVTSIANSAPGRLLGTWWYNAWG FDWLYDKVFVKPFLGIAWLLKRDPLNSMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSI GAVVVLALLMVLR >gi|296918664|gb|GG773036.1| GENE 38 38027 - 39556 1766 509 aa, chain + ## HITS:1 COG:ECs3161 KEGG:ns NR:ns ## COG: ECs3161 COG1008 # Protein_GI_number: 15832415 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Escherichia coli O157:H7 # 1 509 1 509 509 889 99.0 0 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALVTMGLTLALSLQLWLQGGYSLTQSAGI PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSNGVEYLLMLGFFIAFAVKMPVVPL HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF YPQPILDTSHSAIGNIQQWFVNSVTTTRP >gi|296918664|gb|GG773036.1| GENE 39 39563 - 41020 1777 485 aa, chain + ## HITS:1 COG:ECs3160 KEGG:ns NR:ns ## COG: ECs3160 COG1007 # Protein_GI_number: 15832414 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Escherichia coli O157:H7 # 61 485 1 425 425 706 99.0 0 MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIGLNAALVSLWFVGQAGA MDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLA NANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQ SGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVST FLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGY SSISHLGYLLVALIALQTGEMSMEAVGVYLVGYLFSSLGAFGVVSLMSSPYRGPDADSLF SYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQAHLWWLVGAVVVGSAI GLYYYLRVAVSLYLHAPEQPGRDAPSNWQYSAGGIVVLISALLVLVLGVWPQPLISIVRL AMPLM >gi|296918664|gb|GG773036.1| GENE 40 41131 - 41634 527 167 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2422 NR:ns ## KEGG: ECS88_2422 # Name: yfbM # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 167 1 167 167 323 100.0 2e-87 MGMIGYFAEIDSEKINQLLESTKKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFD PAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRSELRKQFSIKRLNEM EIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG >gi|296918664|gb|GG773036.1| GENE 41 41737 - 42708 453 323 aa, chain - ## HITS:1 COG:yfbL KEGG:ns NR:ns ## COG: yfbL COG2234 # Protein_GI_number: 16130206 # Func_class: R General function prediction only # Function: Predicted aminopeptidases # Organism: Escherichia coli K12 # 1 323 3 325 325 602 93.0 1e-172 MKKINFAFIILFLFSLPLIIFYQPWVNALPPTPRHASPEQLEKTVRYLTQTVHPRSADNI DNLNRSAEYIKEVFISNGARVTAQDVPITGGPYKNIVANYGPADGPLIIIGAHYDSVSSY ENDQLTYTPGADDNASGVAGLLELARLLQQQTPGIGVQLVAYASEEPPFFRSDEMGSAVH AASLERPVKLMIALEMIGYYDSTPGSQDYPYPAMSWLYPDRGDFIAVVGRMQDINAVRQV KAALLSSRDLSVYSMNAPGFIPGIDFSDHLNYWQHDIPAVMITDTAFYRNKQYHLPGDIA DRLNYQKMAQVVDGVTTLLYNSK >gi|296918664|gb|GG773036.1| GENE 42 42867 - 44588 1296 573 aa, chain + ## HITS:1 COG:yfbK KEGG:ns NR:ns ## COG: yfbK COG2304 # Protein_GI_number: 16130205 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Escherichia coli K12 # 1 565 8 567 575 938 92.0 0 MLLISSLILSGCGPEPEDKKSQQQQSTTPTDQQVLAAQQAATKVAEQSAAKAAADAKALA QQEVQQYSDKQALLGRLQAAPKYQHAAREKAASQIANPGTARYQQFDDNPVKQVAQNPLA TFSLDVDTGSYANVRRFLNQGLLPPPDAVRVEEIVNYFPSDWDIKDKQSIPASKPIPFAM RYELAPAPWNEQRTLLKVDILAKDRKSEELPASNLVFLIDTSGSMISDERLPLIQSSLKL LVKELREQDNIAIVTYAGDSRIALPSISGSHKAEINAAIDSLDAEGSTNGGAGLEMAYQQ AAKGFIKGGINRILLATDGDFNVGIDDPKSIESMVKKQRESGVTLSTLGVGDSNYNEAMM VRIADVGNGNYSYIDTLSEAQKVLNSEMRQTLITVAKDVKAQIEFNPAWVTEYRQIGYEK RQLRAEDFNNDNVDAGDIGAGKHITFLFELTLKGQKASIDKLRYAPDNKSAKSDKTKELA WLKIRWKSPQGKESQLVEFPLAFAIKAPSEDMRFRAAVAAYGQKLRGSEYLNNTSWQQIK QWAQKAKGEDPQGYRAEFIRLIGLAKDLDNSQN >gi|296918664|gb|GG773036.1| GENE 43 44709 - 45626 563 305 aa, chain - ## HITS:1 COG:ECs3156 KEGG:ns NR:ns ## COG: ECs3156 COG1234 # Protein_GI_number: 15832410 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Escherichia coli O157:H7 # 1 305 7 311 311 611 96.0 1e-175 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKI FISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPHGIREFVETALRISGSWTDYPLEIVE IGAGEIFDDGLRKVTAYPMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKA GKTIMLDDGRQINGADYLAVPVPGKALAIFGDTGPCDAALELAKGVDVMVHEATLDMAME AKANSRGHSSTRQAAALAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPATELANDF AVFSI >gi|296918664|gb|GG773036.1| GENE 44 45691 - 46152 487 153 aa, chain + ## HITS:1 COG:elaA KEGG:ns NR:ns ## COG: elaA COG2153 # Protein_GI_number: 16130202 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli K12 # 1 153 1 153 153 283 86.0 1e-76 MIDWQDLHHSDLSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDLEGENRHILGWHNGTLV AYARILKSDDELQPVVIGRVIVSEALRGEKIGQQLMSKALESCTRRWPEKPIYLGAQAHL QNFYGQFGFIPVTDIYEEDGIPHIGMAREVIQA >gi|296918664|gb|GG773036.1| GENE 45 46207 - 46512 504 101 aa, chain + ## HITS:1 COG:ECs3154 KEGG:ns NR:ns ## COG: ECs3154 COG4575 # Protein_GI_number: 15832408 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 84 1 84 101 146 100.0 8e-36 MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAEKALDDVKKRVSQASDS YYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR >gi|296918664|gb|GG773036.1| GENE 46 46591 - 47739 801 382 aa, chain + ## HITS:1 COG:ECs3153 KEGG:ns NR:ns ## COG: ECs3153 COG1169 # Protein_GI_number: 15832407 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Escherichia coli O157:H7 # 76 380 1 305 356 593 99.0 1e-169 MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWLASQQVYPQFYWQQRNG DEEAAVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDPSQGNLLLPRLEWRRCGGK ATLRLTLFSESSLQHDAIKAKEFIATLVSIKPLPGLHLTTTREQHWPDKTGWTQLIELAT KTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLNLNCYHFYMAFDGENAFLGSSPE RLWRRRDKALRTEALAGTVANHPDDKQAQQLGEWLMADDKNQRENMLVVEDICQRLQADT QTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVICLHQLQPTAAVAGLPRDLARQFIARH EPFTREWYAGSAGYLSLQQSAS >gi|296918664|gb|GG773036.1| GENE 47 48191 - 49645 1476 484 aa, chain + ## HITS:1 COG:ECs3152 KEGG:ns NR:ns ## COG: ECs3152 COG1165 # Protein_GI_number: 15832406 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Escherichia coli O157:H7 # 1 484 73 556 556 954 98.0 0 MAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTH SISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGISWQQRLGDW WQDDKPWLREAPRRESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDV LSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDI EGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQL AHRISDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRAS GKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPKSERERFYLMP QNVHFEHAAAMFELKYHRPQNWQELETTLVDAWRTPTTTVIEMVVNDTDGAQTLQQLLAQ VSHL >gi|296918664|gb|GG773036.1| GENE 48 49642 - 50400 434 252 aa, chain + ## HITS:1 COG:yfbB KEGG:ns NR:ns ## COG: yfbB COG0596 # Protein_GI_number: 16130198 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 252 1 252 252 495 96.0 1e-140 MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLYVDLPGHGGSATISVDG FDDVTGLLCKTLVSYNILNFWLVGYSLGGRVAMMAACQEPAGLCGVVVEGGHPGLQNAEQ RAERQRSDRQWAQRFRTEPLTAVFADWYQQPVFASLNDDQRRELVALRSNNNGATLAAML EATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAELAADCHVIPRAGHNAHRENPA GVIASLAQILRF >gi|296918664|gb|GG773036.1| GENE 49 50415 - 51272 955 285 aa, chain + ## HITS:1 COG:menB KEGG:ns NR:ns ## COG: menB COG0447 # Protein_GI_number: 16130197 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Escherichia coli K12 # 1 285 1 285 285 602 100.0 1e-172 MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQAL ADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPK PVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKA REIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP >gi|296918664|gb|GG773036.1| GENE 50 51272 - 52234 998 320 aa, chain + ## HITS:1 COG:ECs3149 KEGG:ns NR:ns ## COG: ECs3149 COG1441 # Protein_GI_number: 15832403 # Func_class: H Coenzyme transport and metabolism # Function: O-succinylbenzoate synthase # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 615 97.0 1e-176 MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGEISPLPGFSQETWEDAQ SVLLAWVNNWLAGDCEIPQMPSVAFGVSCALAELAETLPQAANYRAAPLCNGDPDDLILK LADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQFAKYVNP DYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLREPDFAFVAEEGVRAVVIKPTLTG SLDKVREQVQAAHALGLTAVISSSIESSLGLTQLARIAAWLTPDTIPGLDTLDLMQAQQV RRWPGSPLPLVDVDALERLL >gi|296918664|gb|GG773036.1| GENE 51 52231 - 53586 1192 451 aa, chain + ## HITS:1 COG:menE KEGG:ns NR:ns ## COG: menE COG0318 # Protein_GI_number: 16130195 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli K12 # 1 451 1 451 451 837 96.0 0 MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELASSFAVQGVVEGSGVMLRAW NTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQFALVPEGENTFPALASLHI QLVEGAHAAAWQPTRLCSMTLTSGSTGLPKAAVHTYQAHLASAEGVLSLIPFGDHDDWLL SLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGCTHASLVPTQLWRLLVNRSSVSL KAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFASTVCAKEADGLADVGSPLPGREVKI VNDEVWLRAASMAEGYWRNGQRVPLVNDEGWYATRDRGEMHNGKLTIVGRLDNLFFSGGE GIQPEEVERVIAAHPAVLQVFIVPVADKEFGHRPVAVVEYDQQSVDLDEWVKDKLARFQQ PVRWLTLPPELKNGGIKISRQALKEWVKRQQ >gi|296918664|gb|GG773036.1| GENE 52 53696 - 53962 166 88 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2410 NR:ns ## KEGG: ECS88_2410 # Name: pmrD # Def: polymyxin resistance protein B # Organism: E.coli_S88 # Pathway: not_defined # 1 88 1 88 88 169 100.0 3e-41 MEWLVKKSCCNKQDNRHVIMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREK LHTVKVLSASCYSPDEWERQCKAAGKTQ >gi|296918664|gb|GG773036.1| GENE 53 53956 - 54342 457 128 aa, chain - ## HITS:1 COG:yfbJ KEGG:ns NR:ns ## COG: yfbJ COG0697 # Protein_GI_number: 16130193 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 128 95 222 222 204 98.0 3e-53 MGLMWGLFSVIIASAAQLSMGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLS VFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIF LPTTKQRY >gi|296918664|gb|GG773036.1| GENE 54 54342 - 54677 409 111 aa, chain - ## HITS:1 COG:Z3516 KEGG:ns NR:ns ## COG: Z3516 COG0697 # Protein_GI_number: 15802807 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 111 1 111 111 151 96.0 2e-37 MIWLTLVFASLLSVAGQLCQKQATCFAAVNKRRKHIVLWLGLALACLGLAMVLWLLVLQN VPVGIAYPMLSLNFVWVTLAAVKLWHEPVSLRHWCGVAFIIGGIVILGSTV >gi|296918664|gb|GG773036.1| GENE 55 54674 - 56326 1478 550 aa, chain - ## HITS:1 COG:ECs3145 KEGG:ns NR:ns ## COG: ECs3145 COG1807 # Protein_GI_number: 15832399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Escherichia coli O157:H7 # 1 550 1 550 550 1037 98.0 0 MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLASGDWIVPHLLGLRYFE KPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFTLRLWRNKRLALLATVIYL SLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKGKSAGFLLLGITCGMGVMTKG FLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLTVLPWGLAIAQREPDFWHYFFWV EHIQRFALDDAQHRAPFWYYLPVIIAGSLPWLGLLPGALYAGWKNRKHSATVYLLSWTIM PLLFFSVAKGKLPTYILSCFAPLAMLMAHYALLAAKNNPLALRINGWINIAFGVTGIIAT FVVSPWGPMNTPVWQTFESYKVFCAWSIFSLWAFFGWYTLTNVEKTWPFAALCPLGLALL VGFSIPDRVMEGKHPQFFVEMTQESLQPSRYILTDSVGVAAGLAWSLQRDDIIMYRQTGE LKYGLNYPDAKGRFVSGDEFANWLNQHRQEGIITLVLSVDRDEDINSLAIPPADVIDRQE RLVLIQYRPK >gi|296918664|gb|GG773036.1| GENE 56 56326 - 57216 664 296 aa, chain - ## HITS:1 COG:ECs3144 KEGG:ns NR:ns ## COG: ECs3144 COG0726 # Protein_GI_number: 15832398 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli O157:H7 # 1 295 1 295 296 599 98.0 1e-171 MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWK MLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQAHSGNW DRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQQVIEAKEAFHLRYNSDCRGAMPFR PLLESGTPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRIQRDKGTPVYTIHAEVEGCA YQHNFVDLLKRAAQEGVTFCPLSELLSGTLPLGQVVRGNIAGREGWLGCQQIAGSH >gi|296918664|gb|GG773036.1| GENE 57 57213 - 59195 1681 660 aa, chain - ## HITS:1 COG:yfbG_2 KEGG:ns NR:ns ## COG: yfbG_2 COG0451 # Protein_GI_number: 16130190 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 306 660 1 355 355 758 98.0 0 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPD NVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAPLNWV LVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQTLPAI KHGNILEIAQRENEATCFGRRTPDDSFLEWHKSASVLHNMVRAVADPWPGAFSYVGNQKF TVWSSRVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQ GSRLNSQPACAARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHP HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC VKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGF RVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFFLRTVDLTDKPS >gi|296918664|gb|GG773036.1| GENE 58 59195 - 60163 889 322 aa, chain - ## HITS:1 COG:yfbF KEGG:ns NR:ns ## COG: yfbF COG0463 # Protein_GI_number: 16130189 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 322 1 322 322 654 99.0 0 MFEIHPVKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAHMLVE ASQAEGSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEG YDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHER STFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTTPLRMLSLLG SIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYT DVRARPRYFVQQVIRPSSKENE >gi|296918664|gb|GG773036.1| GENE 59 60167 - 61324 886 385 aa, chain - ## HITS:1 COG:yfbE KEGG:ns NR:ns ## COG: yfbE COG0399 # Protein_GI_number: 16130188 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 385 6 390 390 739 97.0 0 MTDGKKMSGFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAV SSATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAI EAAITPRTKAIIPVHYAGAPTDIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTA IFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRHTWGRAPQAEVLTPGY KYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFI IRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICS LPLFPDMTTADADRVITALQQLAGQ >gi|296918664|gb|GG773036.1| GENE 60 61614 - 62216 218 200 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C2534 NR:ns ## KEGG: UTI89_C2534 # Name: ais # Def: Ais protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 200 10 209 209 382 99.0 1e-105 MLAFCRSSLKSKKYFIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFR HAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSA GKKLTVDKRFLQCGNEIYSAIKDLQRKAPDKNIVIFTHNHCLTYIAKDKRDATFKPDYLD GLVMHVEKGKVYLDGEFVNH >gi|296918664|gb|GG773036.1| GENE 61 62255 - 62680 354 141 aa, chain - ## HITS:1 COG:yfaO KEGG:ns NR:ns ## COG: yfaO COG0494 # Protein_GI_number: 16130186 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli K12 # 1 141 1 141 141 285 99.0 1e-77 MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWALSGGGVEPGERIEEALRREIREELGE QLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSANREVKINEEFQDYAWVKPE DLVHYDLNVATRKTLRLKGLL >gi|296918664|gb|GG773036.1| GENE 62 62959 - 63501 671 180 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C2532 NR:ns ## KEGG: UTI89_C2532 # Name: yfaZ # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 180 8 187 187 276 100.0 4e-73 MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGD AAGVGLGLNLPLGPLMATVGGKGVYTNPNDGDEGYAAAVGGGLQWQIGDSFRLFGEYYYS PDSLSSGIKSYEEANAGARYTIMRPVSIEAGYRYLNLAGKNGNRDNAIADGPYVGVNASF >gi|296918664|gb|GG773036.1| GENE 63 63601 - 64803 1133 400 aa, chain + ## HITS:1 COG:yfaY KEGG:ns NR:ns ## COG: yfaY COG1058 # Protein_GI_number: 16130184 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Escherichia coli K12 # 1 400 1 400 400 780 98.0 0 MLKVEMLSTGDEVLHGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDDLVTILRERSQH ADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEAWLKEMERYFHERGRVMAPSNRKQAE LPASAEFINNPVGTACGFAIQLNRCLMFFTPGVPSEFKVMVEHEILPRLRERFSLPQPPV CLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPIIELKLTGPASEEQAMEKLWLDVK RVAGQSVIFEGTEGLPAQISRELQSRQFSLTLSEQFTGGLLALQLSRADAPLLACEVVPS QEETLAQTAHWITERRANHFAGLALAVSGLEDEHLNFALATPDGTFALRVHFSATRYSLA IRQEVCAMMALNMLRRWLNGQDIASEHGWIEVVESMTLSV >gi|296918664|gb|GG773036.1| GENE 64 65023 - 65805 618 260 aa, chain + ## HITS:1 COG:yfaX KEGG:ns NR:ns ## COG: yfaX COG1414 # Protein_GI_number: 16130183 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 260 1 260 260 511 98.0 1e-145 MLESSKVPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYLLLNELRRQRFLSLDHQ ENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLLCHLGIIDNGSAYYILKVESS ATISVRSHEGKSLSLYRSGIGKCLLAWQPAAVQKSIIEELVWEQMTPTTITHPQRLYEEL ARIRRQGWSYDNGEDYADVRCVAAPVFNANNELTAAISVVGTRLQINEEYRDYLAGKAIA CARDISRLLGWKSPFDLQAS >gi|296918664|gb|GG773036.1| GENE 65 65820 - 67025 1050 401 aa, chain + ## HITS:1 COG:ECs3135 KEGG:ns NR:ns ## COG: ECs3135 COG4948 # Protein_GI_number: 15832389 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli O157:H7 # 1 401 5 405 405 853 99.0 0 MTLPKIKQVRAWFTGGAIAEKGAGGGDYHDQGANHWIDDHIATPMSKYRDYEQSRQSFGI NVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLNATL YYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMG FIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFWLMLDCWMSQDVNYATKLAHACA PYNLKWIEECLPPQQYEGYRELKHNAPAGMMVTSGEHHGTLQSFRTLSETGIDIMQPDVG WCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTMRPQF DPILLNEPVPVNGRIHKSVLDKPGFGVELNRDCNLKRPYSH >gi|296918664|gb|GG773036.1| GENE 66 67082 - 68371 1307 429 aa, chain + ## HITS:1 COG:yfaV KEGG:ns NR:ns ## COG: yfaV COG0477 # Protein_GI_number: 16130181 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 429 14 442 442 748 98.0 0 MSTALLDAVVKKNRARLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIF FVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLGAAEAG FFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLSGALLEMHGFMGHPGWFWMFV IEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKVTSRLSDALRNGRV WQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSD KTGERRNVAALTLLAAGIGIGLSGLLSPVLAIVALCVAAIGFIAVQPVFWTMPTQLLSGT ALAAGIGFINLFGAVGGFIAPILRVKAETLFSSDAAGLLTLAAVAVIGSLIIFTLRVNRT VAQTDVAHH >gi|296918664|gb|GG773036.1| GENE 67 68389 - 69192 876 267 aa, chain + ## HITS:1 COG:yfaU KEGG:ns NR:ns ## COG: yfaU COG3836 # Protein_GI_number: 16130180 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Escherichia coli K12 # 1 267 1 267 267 523 98.0 1e-148 MNALLTNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQ LQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGER GVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADL SASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDT MLYSDALDQRLAMFKSGKNGPRVKGSY >gi|296918664|gb|GG773036.1| GENE 68 69233 - 69418 331 61 aa, chain - ## HITS:1 COG:ECs3129 KEGG:ns NR:ns ## COG: ECs3129 COG5464 # Protein_GI_number: 15832383 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 61 244 308 308 110 90.0 5e-25 MTIAERLRQEGHQIGWQEGKLEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANN H >gi|296918664|gb|GG773036.1| GENE 69 69431 - 70390 809 319 aa, chain - ## HITS:1 COG:ECs3129 KEGG:ns NR:ns ## COG: ECs3129 COG5464 # Protein_GI_number: 15832383 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 315 1 303 308 585 93.0 1e-167 MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAY YSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPL LFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQ KHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQK ERLMTIAERLRQEGHQIGWQEGKIEGWQEGKLEGLQKGKVEGMHEQAIKIALRMLEQGFE REIVLATTQLSDADIPNCY >gi|296918664|gb|GG773036.1| GENE 70 70583 - 71773 1151 396 aa, chain - ## HITS:1 COG:ECs3128 KEGG:ns NR:ns ## COG: ECs3128 COG0247 # Protein_GI_number: 15832382 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 829 99.0 0 MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCK RCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKP VRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGK DLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIAT SSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCH MEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEES GADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA >gi|296918664|gb|GG773036.1| GENE 71 71770 - 73029 1151 419 aa, chain - ## HITS:1 COG:glpB KEGG:ns NR:ns ## COG: glpB COG3075 # Protein_GI_number: 16130177 # Func_class: E Amino acid transport and metabolism # Function: Anaerobic glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli K12 # 1 419 1 419 419 797 98.0 0 MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDI HSGLESLRQQAPAHPYTLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLR STWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLAVETAEIELPELDVLR NNATEFRAVNIARFLDNEENWPLIIDALIPVANTCEMILMPACFGLADDKLWRWLNEKLP CSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADI PLRPRFAVLASGSFFSGGLVAERDGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGV TTDEALRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ >gi|296918664|gb|GG773036.1| GENE 72 73019 - 74647 1698 542 aa, chain - ## HITS:1 COG:ECs3126 KEGG:ns NR:ns ## COG: ECs3126 COG0578 # Protein_GI_number: 15832380 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 542 1 542 542 1046 99.0 0 MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARY AVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGINAEA IEPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIRE GATVCGVRVRNHLTGEIQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRI NQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAP VMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRL MAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRNVISLPAPLRGSAVYRHGDRTP AWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAA GLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKD AL >gi|296918664|gb|GG773036.1| GENE 73 74920 - 76278 1560 452 aa, chain + ## HITS:1 COG:glpT KEGG:ns NR:ns ## COG: glpT COG2271 # Protein_GI_number: 16130175 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli K12 # 1 452 1 452 452 882 99.0 0 MLSIFKPAPHKARLPTAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGF SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSI AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGM AWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELT AKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEY AGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFL IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVM IGGSILAVILLIVVMIGEKRRHEQLLQKRNGG >gi|296918664|gb|GG773036.1| GENE 74 76283 - 77359 1137 358 aa, chain + ## HITS:1 COG:ECs3124 KEGG:ns NR:ns ## COG: ECs3124 COG0584 # Protein_GI_number: 15832378 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Escherichia coli O157:H7 # 1 358 1 358 358 718 100.0 0 MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGAD YLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEG FDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQ EGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMDLNLVQLIAYTD WNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMV QDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE >gi|296918664|gb|GG773036.1| GENE 75 77562 - 78212 503 216 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2385 NR:ns ## KEGG: ECS88_2385 # Name: inaA # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 216 1 216 216 427 100.0 1e-118 MAVSAKHDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYP FGRPTIVREVAVIKELERAGVIVPKIVFGEAVKVEGEWRALLVTEDMAGFISIADWYARH AVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR LRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM >gi|296918664|gb|GG773036.1| GENE 76 78485 - 79615 1477 376 aa, chain - ## HITS:1 COG:ECs3118 KEGG:ns NR:ns ## COG: ECs3118 COG0208 # Protein_GI_number: 15832372 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Escherichia coli O157:H7 # 1 376 1 376 376 757 99.0 0 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG QIDAEVDTDDLSNFQL >gi|296918664|gb|GG773036.1| GENE 77 79762 - 82047 2711 761 aa, chain - ## HITS:1 COG:ECs3117 KEGG:ns NR:ns ## COG: ECs3117 COG0209 # Protein_GI_number: 15832371 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 761 1 761 761 1583 100.0 0 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEE LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWE ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI >gi|296918664|gb|GG773036.1| GENE 78 83017 - 86487 2604 1156 aa, chain + ## HITS:1 COG:yfaL_2 KEGG:ns NR:ns ## COG: yfaL_2 COG3468 # Protein_GI_number: 16130168 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 711 1156 1 446 446 705 93.0 0 MTLFADNSVSGEYNNGGAIFAKENSTINLANVIFDSNVAGGYGGAIYSAGTNDTGAADLR VTNAVFHNNIANDGKGGAIYTINNDVYLSDDAFNNNQAYTSTSYSDGDGGAIDVTDNSTD NTHLSGKTIINNTSFTNNYAEGYGGAIYTSSTTSPYLIDISVDDNYDQNNGVMIDENNSA SGYDHSATAAAGGFMYIGHSVAEFNIAADKTLVIGNTSNDGAIDSLAGTGVIVKEGAGEL VLNADNNAFTGEISIQNGEVTLGRSDELMNVGDTHCQSDPQDCFGLMVGSTVHSEYQAEL NVGNTQQTFVHSLTGFANGILNIDAGGNVTVNQGGFSGSIQGEGQLTVAQDGSYLLTGAQ SMALTGDIVVEDNAVLSLAGNQADLRAMQSDPQSIVLNGGVLDLSDFTTWDGDSSYNDGL QISGSGGTVIGSNDVVDISSGDDLHIGGSDASQNGVYVVINAGDQRVTLANNNGYLGNTQ IASGTLEVSDNSQLGNTSYNRSVIFTDPQQHSEMDVTTDVDTRSATTGQGRNIEMRADGE IHVEDGVDTQWGGLMADSTGQQLDSVSTLTKSGGGTLELTASGTATSAVRVEDGTLKGEA ENIIPYVSSLWVGEDGVFETGQNQDIRSIDATSGGDIDITDGTVLRLTQQDTNQALDASL FSGDGTLVNATDGVTLAGELNTNLETDSLTYLSDVTVNGNLTNTSGAVSLQNGVAGNTLT VNGDYTGGGTLLLDSELNGDDSASDQLVLNGNTAGNTAVVINPITGIGEPTSTGIKVVDF AADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVNPTPPPDPDPTPDPDP TPDPDPTPDPEPTPAYQPVLNAKVGGYFNNLRAANQAFVMERRDHAGGDGQTLNLRVIGG RYHYTAVGQLAQHEDTSTVQLSGNLFSGHWGDDGEWMLGIVGGYSDNQGDSRSNMTGTRA DNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGVDHYHSSGIIASLE AGYQWLPGHGVVIEPQTQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVG VTPTLDLNYYHDPHATEIEEDGSTISDDAVKQRGEIKVGITGNISQRVSLRGSVAWQKGS DDFAQTAGFLSMTVKW >gi|296918664|gb|GG773036.1| GENE 79 86627 - 87349 824 240 aa, chain - ## HITS:1 COG:ubiG KEGG:ns NR:ns ## COG: ubiG COG2227 # Protein_GI_number: 16130167 # Func_class: H Coenzyme transport and metabolism # Function: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase # Organism: Escherichia coli K12 # 1 240 1 240 240 496 99.0 1e-140 MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKV LDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHA GQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRM VPKGTHDVKKFIKPAELLGWVDQTSLKERHMTGLHYNPITNSFKLGPGVDVNYMLHTQNK >gi|296918664|gb|GG773036.1| GENE 80 87496 - 90123 3198 875 aa, chain + ## HITS:1 COG:ECs3114 KEGG:ns NR:ns ## COG: ECs3114 COG0188 # Protein_GI_number: 15832368 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Escherichia coli O157:H7 # 1 875 1 875 875 1659 99.0 0 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV AAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE LLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVV VTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVY SMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVL TEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTG VRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERN GLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSEDENVVGLQRVA EPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE >gi|296918664|gb|GG773036.1| GENE 81 90272 - 91960 1160 562 aa, chain + ## HITS:1 COG:yfaA KEGG:ns NR:ns ## COG: yfaA COG4685 # Protein_GI_number: 16130165 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 562 17 578 578 1105 97.0 0 MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYSGSGPEKTLSPLVVHNNLQIDLNEPDL FLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKL FSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKI NSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRW QASFGLEERTAEKTPVRQRIVVSARLLGFGYQRLVPSFAGMRFEMGNDGWHSFLALNDES ASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGLCWY EDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRRE VSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMV DVIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYV MKLAQMEPGAAWQWLPITWQPL >gi|296918664|gb|GG773036.1| GENE 82 91957 - 92352 298 131 aa, chain + ## HITS:1 COG:ECs3112 KEGG:ns NR:ns ## COG: ECs3112 COG3234 # Protein_GI_number: 15832366 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 131 10 140 216 260 96.0 5e-70 MRHGLLVLICWLYCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVR FAANEALKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQ YNSQFIGQDIN >gi|296918664|gb|GG773036.1| GENE 83 92514 - 97118 4099 1534 aa, chain + ## HITS:1 COG:ECs3111 KEGG:ns NR:ns ## COG: ECs3111 COG2373 # Protein_GI_number: 15832365 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Escherichia coli O157:H7 # 1 1534 1 1534 1534 2964 98.0 0 MDTQRFQSQFHWHLSFKFSGAIAACLSLSLVGTGLANADDSLPSSNYVPPAGGTFFLLAD SSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQY LGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQ FSPLKKYPLVEQFRYPLWQAKPVEPQQGVKLEGASSNFISPQPGNIYIPLGKQEPGLYLV EAMVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGV TDGSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRV DVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVA GGYELRLAYRKQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVK DARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDDNGHVALNLPAADKPSRYLLTV SASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWL RLEDRTSHSGELQSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTSHTGTV DIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQY EARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVE LTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQA LSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWR ITARGMNGDGLVGQGRAYLRSEKSLYMKWSMPTVYRMGDKPAAGLFIFSQQDNEPVALVT KFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVE QQKNVMLGGGDNALTLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPL SLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYAD WQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAI ARRGTKTEDFSEEDTSDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQY AWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPP VVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNI PVTVERQLYRLIPGEEEMSFTLLPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLP PGADVERTTWGISVNKPNPAKQQGQLLEKARNEMGELGYMVPVKELTGTVTFRHLLRFSQ KGQFVLPPARYVRSYAPAQQSVAPGSEWIGMQVK >gi|296918664|gb|GG773036.1| GENE 84 97119 - 98768 1116 549 aa, chain + ## HITS:1 COG:yfaQ KEGG:ns NR:ns ## COG: yfaQ COG5445 # Protein_GI_number: 16130163 # Func_class: S Function unknown # Function: Predicted secreted protein # Organism: Escherichia coli K12 # 1 549 1 549 549 1048 94.0 0 MNWYRIVWLLALVTLPTLAEETPLQLALRGAQHDQLYQLSSSGVTKVSVLPDTLTTPLGS LWKLYIYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDSALVRSCGLYFAPQRLHI GADMWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEA KIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATA LNRVLPVPTQVASGQCVLVDLFARYPLKKVTEEKSTTAVKPGVLNGRYRVTFANGNHMTF VSHGETTLLTVKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTYLQQNADR DGDCLSIPDSSATQRVSASPATVGARTMTAWTQDLIYAGDPVHYHGSRVTEGTLSWRHAT AQAGQGERYDQILAFAYPDNNLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRVLQDEMGYN EPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIE TLTRQLLMD >gi|296918664|gb|GG773036.1| GENE 85 98773 - 99549 482 258 aa, chain + ## HITS:1 COG:ECs3108 KEGG:ns NR:ns ## COG: ECs3108 COG4676 # Protein_GI_number: 15832362 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 512 98.0 1e-145 MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQTINYPASSVNMADD QNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISP DGQSRQKMQFYSTPGAGAIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGA LDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETF IVPMRNAGELTLVKSFDW >gi|296918664|gb|GG773036.1| GENE 86 99660 - 100844 1290 394 aa, chain - ## HITS:1 COG:atoB KEGG:ns NR:ns ## COG: atoB COG0183 # Protein_GI_number: 16130161 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 394 1 394 394 647 98.0 0 MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSLHVDEVIMGNVLQAG LGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSL APYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELA LHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTAEALGALRPAFDKAG TVTAGNASGINDGAAALVIMEESSALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKA LQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFEPEKVNVNGGAIALGHPIGASGARILV TLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN >gi|296918664|gb|GG773036.1| GENE 87 100875 - 102197 1156 440 aa, chain - ## HITS:1 COG:atoE KEGG:ns NR:ns ## COG: atoE COG2031 # Protein_GI_number: 16130160 # Func_class: I Lipid transport and metabolism # Function: Short chain fatty acids transporter # Organism: Escherichia coli K12 # 1 440 1 440 440 793 99.0 0 MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAF GMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVG AMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGD TLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERL EESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAA RSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSG GGHWVIQGPFVMPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMG YCITALLFSGVIFVIGLTLF >gi|296918664|gb|GG773036.1| GENE 88 102194 - 102844 544 216 aa, chain - ## HITS:1 COG:atoA KEGG:ns NR:ns ## COG: atoA COG2057 # Protein_GI_number: 16130159 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Escherichia coli K12 # 1 216 1 216 216 426 99.0 1e-119 MDAKQRIARRVAQELRDGDIVNLGIGLPTMVANYLPEGIHITLQSENGFLGLGPVTTAHP DLVNAGGQPCGILPGAAMFDSAMSFALIRGGHIDACVLGGLQVDEEANLANWVVPGKMVP GMGGAMDLVTGSRKVIIAMEHCAKDGSAKILRRCTMPLTAQHAVHMLVTELAVFRFIDGK MWLTEIADGCDLATVRAKTEARFEVAADLNTQRGDL >gi|296918664|gb|GG773036.1| GENE 89 102844 - 103506 678 220 aa, chain - ## HITS:1 COG:atoD KEGG:ns NR:ns ## COG: atoD COG1788 # Protein_GI_number: 16130158 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Escherichia coli K12 # 1 220 1 220 220 410 99.0 1e-114 MKTKLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTG IGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTP TGVGSVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCDTLGNLTYHLSARNFNPLIAL AADITLVEPDELVETGELQPDHIVTPGAVIDHIIVSQESK >gi|296918664|gb|GG773036.1| GENE 90 103702 - 105087 1025 461 aa, chain - ## HITS:1 COG:atoC KEGG:ns NR:ns ## COG: atoC COG2204 # Protein_GI_number: 16130157 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 1 461 1 461 461 909 99.0 0 MTAINRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPE MDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRAL QLQSMKKEIRHLHQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKE LIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGT LLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFRE DLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPG NIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEAKTAPVGERNLKEEIKRVEKR IIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGIDPADV >gi|296918664|gb|GG773036.1| GENE 91 105084 - 106910 1339 608 aa, chain - ## HITS:1 COG:atoS_3 KEGG:ns NR:ns ## COG: atoS_3 COG0642 # Protein_GI_number: 16130156 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 331 608 1 278 278 521 98.0 1e-147 MHYMKWIYPRRLRNQMILMAILMVIVPTLTIGYIVETEGRSAVLSEKEKKLSAVVNLLNQ ALGNRYDLYIDLPREERIRALNAELAPITENITHAFPGIGAGYYNKTLDAIITYAPSALY QNNVGVTIAADHPGREVMRTNTPLVYSGRQVRGDILNSMIPIERNGEILGYIWANELTED IRRQAWKMDVRIIIVLTAGLLISLLLIVLFSRRLSANIDIITDGLSTLAQNIPTRLPQLP GEMGQISQSVNNLAQALRETRTLNDLIIENAADGVIAIDRQGDVTTMNPAAEVITGYQRH ELVGQPYSMLFDNTQFYSPVLDTLEHGTEHVALEISFPGRDRTIELSVTTSRIHNTHGEM IGALVIFSDLTARKETQRRMAQAERLATLGELMAGVAHEVRNPLTAIRGYVQILRQQTRD PIHQEYLSVVLKEIDSINKVIQQLLEFSRPRHSQWQQVSLNALVEETLVLVQTAGVQARV DFISELDNELSPINADRELLKQVLLNILINAVQAISARGKIRIRTWQYSDSQQAISIEDN GSGIDLSLQKKIFDPFFTTKASGTGLGLALSQRIINAHQGDIRVASLPGYGATFTLILPI NPQGNQTV >gi|296918664|gb|GG773036.1| GENE 92 107077 - 109926 1909 949 aa, chain + ## HITS:1 COG:rcsC_1 KEGG:ns NR:ns ## COG: rcsC_1 COG0642 # Protein_GI_number: 16130155 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 17 716 1 700 700 1438 99.0 0 MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQ RFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQTDVPAFEPLFADSDCSAMSNTWRG SLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVERDTALKALHERINK YRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANRLQALLGIEQTIRMENFFLPGTL PMGVTILDENGHTLISLTGPESKIKGDPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIV YSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNR KIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDVLTSN NTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKSMFLATVSHE LRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEP REFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKF TDTGCIVLHVRADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAI CEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQ FLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVNKKWQGRAVVTFCRRHIGIPLEKAPGE WVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRSLL ADQLGSLGYQCKTANDGVDALNVLNKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVI GVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES >gi|296918664|gb|GG773036.1| GENE 93 110126 - 110776 790 216 aa, chain - ## HITS:1 COG:ECs3106 KEGG:ns NR:ns ## COG: ECs3106 COG2197 # Protein_GI_number: 15832360 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 400 100.0 1e-111 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD >gi|296918664|gb|GG773036.1| GENE 94 110793 - 113465 2419 890 aa, chain - ## HITS:1 COG:ZyojN_1 KEGG:ns NR:ns ## COG: ZyojN_1 COG0642 # Protein_GI_number: 15802769 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 700 1 700 700 1274 99.0 0 MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAI QKRVDTWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDNS TLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLISTLPLKDLTSGFKESTVSDIVD SRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIP PGMPLDSFRLEPDATATGNNENEKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGT LLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRSTESVPSTAVNNELRILRAINEEI VSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNITTMAEQHQGIIQATINNELYEIR MFRSQVAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRMTFMKNIGDALKEPAQSL AESAAKLNAPEGKQLANQADVLVRLVDEIQLANMLADDSWKSETELFSVQDLIDEVVPSV LPAIKRKGLQLLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESS EDRLTFRILDTGEGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNI KTRDGLGTRYSVHIKMLATDPEVEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATC ITPDERLISQDYDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVL QLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQT AHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL >gi|296918664|gb|GG773036.1| GENE 95 114195 - 115286 1346 363 aa, chain + ## HITS:1 COG:ECs3104 KEGG:ns NR:ns ## COG: ECs3104 COG3203 # Protein_GI_number: 15832358 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 363 1 367 367 624 97.0 1e-179 MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDDKSVDGDQTYMRLG FKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLKFQDVGSFDYGRNYGVVYD VTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGSVSGE GMTNNGRGALRQNGDGVGGSITYDYEGFGIGGAISSSKRTDDQNSPLYIGNGDRAETYTG GLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFETVAQYQFDFGLRPSLAYLQSKGK NLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLV YQF >gi|296918664|gb|GG773036.1| GENE 96 115398 - 116453 1255 351 aa, chain + ## HITS:1 COG:ECs3103 KEGG:ns NR:ns ## COG: ECs3103 COG1477 # Protein_GI_number: 15832357 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Escherichia coli O157:H7 # 1 351 1 351 351 692 99.0 0 MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGTFWRASIPGIDAKRSAE LKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEAMADIVTTSLRIGAKTDGA MDITVGPLVNLWGFGPEQQPVQIPSQEQIDAMKAKTGLQHLTVINQSHQQYLQKDLPDLY VDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSRGMNGAGQPWRVAIQKPTDKENA VQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQTGRPIEHNLVSVTVIAPTALEADA WDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSFKTWMSPQFKSFLISEKN >gi|296918664|gb|GG773036.1| GENE 97 116527 - 117591 493 354 aa, chain + ## HITS:1 COG:Zada_1 KEGG:ns NR:ns ## COG: Zada_1 COG2169 # Protein_GI_number: 15802766 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Escherichia coli O157:H7 EDL933 # 1 184 1 184 184 350 96.0 2e-96 MKYATCLTDDQRWQSVLARDSNADGEFVFAVRTTGIFCRPSCRARHALRENVSFYANASE ALAAGFRPCKRCQPDKANPLQHRLDKITHACRLLEQETPVTLEALADQVAMSPFHLHRLF KATTGMTPKAWQQAWRARRLRELLAKGVSVTTSILNAGFPDSSSYYRKADETLGMTAKQF RHGGENLAVRYALADCELGRCLVAESERGICAILLGDDDATLISELQQMFPAADSALADL TFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKP KAVRAVASACAANKLAIVIPCHRVVRGDGTLSGYRWGVSRKAQLLRREAENEER >gi|296918664|gb|GG773036.1| GENE 98 117591 - 118241 411 216 aa, chain + ## HITS:1 COG:ECs3101 KEGG:ns NR:ns ## COG: ECs3101 COG3145 # Protein_GI_number: 15832355 # Func_class: L Replication, recombination and repair # Function: Alkylated DNA repair protein # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 439 97.0 1e-123 MLDLFADAEPWQEPLAAGAVILHRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVA MTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHHLCQRAATAAGYPDFQPDACLIN RYVPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGG ESRLFYHGIQPLKVGGHPLTTDCRYNLTFRQAGKKE >gi|296918664|gb|GG773036.1| GENE 99 118317 - 119960 195 547 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 326 541 133 357 398 79 30 1e-13 MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIKTADTSLLVLPEFLGLLLL LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLAGLTSDVRNITI AFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAVTIWGGFILVARVYKHMATLRE TEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDAQEYRHHIIRADTFHLSAVNWSN IMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLTAQVAFNKLN KFALTPFKAEFPRPQAFPNWQTLELRNVTFSYQDNAFSVGPINLTIKRGELLFLIGGNGS GKSTLAMLLTGLYQPQNGEILLDGKPVSGEQPEDYRKLFSAVFTDVWLFDQLLGPEGQPA NPQLVEKWLAQLKIAHKLELSNGRIVNLKLSKGQKKRVALLLALAEERDIILLDEWAADQ DPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEERDAASR DAVARTA >gi|296918664|gb|GG773036.1| GENE 100 120230 - 121876 1824 548 aa, chain + ## HITS:1 COG:ECs3099 KEGG:ns NR:ns ## COG: ECs3099 COG0579 # Protein_GI_number: 15832353 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli O157:H7 # 1 548 1 548 548 1078 100.0 0 MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSATLGTYLRELEPEWSMT MVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISIEKAVAINEAFQISRQFWA HQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAALQQSSLFRGMRYSEDHAQIKE WAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIASLQKKSNFSLQLSSEVRALKRND DNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLLQESGIPEAKDYAGFPVGGQFLVSE NPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLDGKRVVLFGPFATFSTKFLKNGSLWDL MSSTTTSNVMPMMHVGLDNFDLVKYLVSQVMLSEEDRFEALKEYYPQAKKEDWRLWQAGQ RVQIIKRDADKGGVLRLGTEVVSDQQGTIAALLGASPGASTAAPIMLNLLEKVFGDRVSS PQWQATLKAIVPSYGRKLNGDVAATERELQYTSEVLGLKYDKPQAADSTPKPQLKPQPVQ KEVADIAL >gi|296918664|gb|GG773036.1| GENE 101 122026 - 122514 534 162 aa, chain - ## HITS:1 COG:eco KEGG:ns NR:ns ## COG: eco COG4574 # Protein_GI_number: 16130146 # Func_class: R General function prediction only # Function: Serine protease inhibitor ecotin # Organism: Escherichia coli K12 # 1 162 1 162 162 320 98.0 8e-88 MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQVIQLTPQEDESTLKVEL LIGQTLEVDCNLHRLGGKLESKTLEGWGYDYYVFDKVSSPVSTMMACPDGKKEKKFVTAY LGDAGMLRYNSKLPIVVYTPDNVDVKYRIWKAEEKIDNAVVR >gi|296918664|gb|GG773036.1| GENE 102 123406 - 123669 356 87 aa, chain + ## HITS:1 COG:ECs3096 KEGG:ns NR:ns ## COG: ECs3096 COG3062 # Protein_GI_number: 15832350 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in formation of periplasmic nitrate reductase # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 135 98.0 2e-32 MHTNWQVCSLVVQAKSERISDISTQLNAFTGCEVAVSDAPSGQLIVVVEAEDSETLIQTI ESVRNVEGVLAVSLVYHQQEEQGEETP >gi|296918664|gb|GG773036.1| GENE 103 123666 - 126188 3175 840 aa, chain + ## HITS:1 COG:napA KEGG:ns NR:ns ## COG: napA COG0243 # Protein_GI_number: 16130143 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 840 1 828 828 1707 98.0 0 MKLSRRSFMKANAVAAAAAAAGLRVPPPPAAAAGLSVPGVARAVVGQQEAIKWDKAPCRF CGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLLRMKNGK YDKEGEFTPITWDQAFDVMEDKFKTALKEKGPESIGMFGSGQWTIWEGYAASKLFKAGFR SNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRIT NRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYIIQNNAINQDFFSK HVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVAEYTLEKTAEMTGVP KDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLT GQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPSGTIPAKIGLHAVAQDRAL KDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVSDPYPTVSALAADLILPTAMW VEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFSRRFKTEEVWPEELLAKKPELRG KTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFD DYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAEAP DEEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAKARDLRRGDKVKVVS RRGEVISIVETRGRNRPPQGLVYMPFFDAAQLVNKLTLDATDPLSKETDFKKCAVKLEKV >gi|296918664|gb|GG773036.1| GENE 104 126195 - 126890 505 231 aa, chain + ## HITS:1 COG:napG KEGG:ns NR:ns ## COG: napG COG1145 # Protein_GI_number: 16130142 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli K12 # 1 231 1 231 231 449 100.0 1e-126 MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASA CVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREI ESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPT VHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS >gi|296918664|gb|GG773036.1| GENE 105 126877 - 127740 590 287 aa, chain + ## HITS:1 COG:napH KEGG:ns NR:ns ## COG: napH COG0348 # Protein_GI_number: 16130141 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Escherichia coli K12 # 1 287 1 287 287 549 100.0 1e-156 MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPWFGVWILHGNYSSSLLF DTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKRLFCSWVCPLNPITDLANW LRRRFDLNQSATIPRHIRYVLLVVILVGSALTGTLIWEWINPVSLMGRSLVMGFGSGALL ILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITVAATDRQKCNRCMDCFHVCPEPH VLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFTITTRWSSGAKS >gi|296918664|gb|GG773036.1| GENE 106 127716 - 128186 436 156 aa, chain + ## HITS:1 COG:ECs3092 KEGG:ns NR:ns ## COG: ECs3092 COG3043 # Protein_GI_number: 15832346 # Func_class: C Energy production and conversion # Function: Nitrate reductase cytochrome c-type subunit # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 320 100.0 7e-88 MEFGSEIMKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQ DRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVG AEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK >gi|296918664|gb|GG773036.1| GENE 107 128196 - 128798 537 200 aa, chain + ## HITS:1 COG:ECs3091 KEGG:ns NR:ns ## COG: ECs3091 COG3005 # Protein_GI_number: 15832345 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Escherichia coli O157:H7 # 1 200 1 200 200 429 100.0 1e-120 MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISC HEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDT PQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTAQKSVAAKMHDQAVKDGQTCI DCHKGIAHKLPDMREVEPGF >gi|296918664|gb|GG773036.1| GENE 108 128811 - 129434 550 207 aa, chain + ## HITS:1 COG:ccmA KEGG:ns NR:ns ## COG: ccmA COG4133 # Protein_GI_number: 16130138 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, ATPase component # Organism: Escherichia coli K12 # 3 207 1 205 205 372 99.0 1e-103 MGMLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEV LWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDGDTAQCLEALAQAGLAG FEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGI VILTTHQPLNVAESKIRRISLTQTGAA >gi|296918664|gb|GG773036.1| GENE 109 129434 - 130093 712 219 aa, chain + ## HITS:1 COG:ECs3089 KEGG:ns NR:ns ## COG: ECs3089 COG2386 # Protein_GI_number: 15832343 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Escherichia coli O157:H7 # 1 219 2 220 220 280 99.0 2e-75 MFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQLLARIAPGIIWVAALLS SLLALERLFRDDLQDGSLEQLMLLPLPLPAAVLAKVMAHWMVTGLPLLILSPLVAMLLGM DVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVLLSILVLPLTIPLLIFATAAMD AASMHLPVDGYLAILGALLAGTATLSPFATAAALRISIQ >gi|296918664|gb|GG773036.1| GENE 110 130111 - 130872 739 253 aa, chain + ## HITS:1 COG:ECs3088 KEGG:ns NR:ns ## COG: ECs3088 COG0755 # Protein_GI_number: 15832342 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Escherichia coli O157:H7 # 9 253 1 245 245 420 100.0 1e-117 MFESGIETMWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFAPADYQQGN SYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAVFTFIALVTGS AWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAGILVLIGVVNLPI IHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTLMRMRNLILLMEKRR PWVSELILKRGRK >gi|296918664|gb|GG773036.1| GENE 111 130869 - 131078 254 69 aa, chain + ## HITS:1 COG:ECs3087 KEGG:ns NR:ns ## COG: ECs3087 COG3114 # Protein_GI_number: 15832341 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Heme exporter protein D # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 90 100.0 7e-19 MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARL RAAQQQEAA >gi|296918664|gb|GG773036.1| GENE 112 131075 - 131554 645 159 aa, chain + ## HITS:1 COG:ECs3086 KEGG:ns NR:ns ## COG: ECs3086 COG2332 # Protein_GI_number: 15832340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c-type biogenesis protein CcmE # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 321 100.0 3e-88 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS >gi|296918664|gb|GG773036.1| GENE 113 131551 - 133494 2280 647 aa, chain + ## HITS:1 COG:ccmF KEGG:ns NR:ns ## COG: ccmF COG1138 # Protein_GI_number: 16130133 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli K12 # 1 646 1 646 647 1142 99.0 0 MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAWLLFMSVAGAFLVLVNA FVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLD IVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRDLNPLLQDPGLIFHPPLLYMG YVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLLGTFLVRSGVLV SVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRESLLLANNVLLV AAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVGPLVRWGRDRPR KIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLGLAMACWIAVLAIAEAALRISRGTKT TFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPN WRGGVATIGVTRDGKPETVLYAEKRYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAW AVRLYYKPFVRWIWAGGLMMALGGLLCLFDPRYRKRVNPQKTAPEAA >gi|296918664|gb|GG773036.1| GENE 114 133491 - 134048 689 185 aa, chain + ## HITS:1 COG:ECs3084 KEGG:ns NR:ns ## COG: ECs3084 COG0526 # Protein_GI_number: 15832338 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 378 100.0 1e-105 MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKPVPKFRLESLDNPGQFY QADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELG NPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYS KEAAQ >gi|296918664|gb|GG773036.1| GENE 115 134045 - 135097 1141 350 aa, chain + ## HITS:1 COG:ccmH_2 KEGG:ns NR:ns ## COG: ccmH_2 COG4235 # Protein_GI_number: 16130131 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli K12 # 130 350 1 221 221 426 99.0 1e-119 MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIAT DLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIY ARSRRRVRVVLEAFPEQSVPEGKRAGYVVYLPGIVVALIVAGVSYYQTGNYQQVKIWQQA TAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASI ATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRTDHSNIRVLSMYA FNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIERSIAQAMQHLSPQESK >gi|296918664|gb|GG773036.1| GENE 116 135143 - 135790 775 215 aa, chain - ## HITS:1 COG:ECs3082 KEGG:ns NR:ns ## COG: ECs3082 COG2197 # Protein_GI_number: 15832336 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 382 99.0 1e-106 MPEATPFQVMIVDDHPLMRRGVRQLLELDSGFEVVAEAGDGASAIDLANRLDIDVILLDL NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ >gi|296918664|gb|GG773036.1| GENE 117 136461 - 136907 315 148 aa, chain + ## HITS:1 COG:yejO KEGG:ns NR:ns ## COG: yejO COG3468 # Protein_GI_number: 16130127 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 13 142 490 619 836 206 86.0 1e-53 MLQVYGAANDPTIKGGRGDAAFTLGNAGSVVDISTYEYTLLDNGNHSWSLAENRVQMPPS TTDVLNMAAAQPLVFDVELDTVRGRLGSVKGVNYDTAMWSSAINSRNNVNTDAGAGFEQT LTGLTLGIDSRFSREESSTTQAGVVWTF >gi|296918664|gb|GG773036.1| GENE 118 137160 - 138920 1459 586 aa, chain - ## HITS:1 COG:ECs3080 KEGG:ns NR:ns ## COG: ECs3080 COG3083 # Protein_GI_number: 15832334 # Func_class: R General function prediction only # Function: Predicted hydrolase of alkaline phosphatase superfamily # Organism: Escherichia coli O157:H7 # 1 586 1 586 586 1172 100.0 0 MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGH FSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVW QLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKLRSLTRRRRFARPLAAFLFIA FIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPD AVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGN TTDNGIFGLFYGISPSYMDGILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLS DFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFNGTNIDDSNQQAFARKYSRAA GNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEEEETFDWSHGHLQVPLVIHWPGT PAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITT PKKTLVLNNNGKYRTYNLRGERVKDEKPQLSLLLQVLTDEKRFIAN >gi|296918664|gb|GG773036.1| GENE 119 138940 - 139167 267 75 aa, chain - ## HITS:1 COG:ECs3079 KEGG:ns NR:ns ## COG: ECs3079 COG3082 # Protein_GI_number: 15832333 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 119 98.0 1e-27 MPQISRYSDEQVEQLLAELLNILEKHKAPTDLSLMVLGNMVTNLINTSIAPAQRQAIANS FARALQSSINEDKAH >gi|296918664|gb|GG773036.1| GENE 120 139349 - 140356 1327 335 aa, chain + ## HITS:1 COG:ECs3078 KEGG:ns NR:ns ## COG: ECs3078 COG3081 # Protein_GI_number: 15832332 # Func_class: R General function prediction only # Function: Nucleoid-associated protein # Organism: Escherichia coli O157:H7 # 1 335 1 335 335 642 100.0 0 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN >gi|296918664|gb|GG773036.1| GENE 121 140537 - 140917 644 126 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|26108973|gb|AAN81176.1|AE016763_135 50S ribosomal protein L25 [Escherichia coli CFT073] # 1 126 1 126 126 252 99 1e-65 MSIESRPLLHTQSRSLTCCWVACSRINLREKEMFTINAEVRKEQGKGASRRLRAANKFPA IIYGGKEAPLAVELDHDKVMNMQVKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLLH IDFVRA >gi|296918664|gb|GG773036.1| GENE 122 140946 - 142706 1582 586 aa, chain - ## HITS:1 COG:ZyejH_1 KEGG:ns NR:ns ## COG: ZyejH_1 COG1061 # Protein_GI_number: 15802740 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Escherichia coli O157:H7 EDL933 # 1 358 1 358 358 726 98.0 0 MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE LVAQNHEKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVTRNLDAFQGEFSLLIVDECH RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH IISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGSERDVLIDDFKAQR FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMS LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITA ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG >gi|296918664|gb|GG773036.1| GENE 123 142856 - 143551 735 231 aa, chain + ## HITS:1 COG:ECs3075 KEGG:ns NR:ns ## COG: ECs3075 COG1187 # Protein_GI_number: 15832329 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 469 100.0 1e-132 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV >gi|296918664|gb|GG773036.1| GENE 124 143579 - 144769 1233 396 aa, chain + ## HITS:1 COG:ECs3074 KEGG:ns NR:ns ## COG: ECs3074 COG0477 # Protein_GI_number: 15832328 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 654 99.0 0 MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFAL GQLIYGPMADSFGRKPVVLGGTLVFAAAAVACALAQTIDQLIVMRFFHGLAAAAASVVIN ALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILAVAAILASAM IFFLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVY IEINHVAPENFGYYFALNILFLFVMTIFNSRFVRRIGALNMFRSGLWIQFIMAAWMVISA LLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGAL LSLATFNSAWPMIWSIAFCATSSILFCLYASRPKKR >gi|296918664|gb|GG773036.1| GENE 125 145103 - 145447 254 114 aa, chain + ## HITS:1 COG:no KEGG:ECO103_2658 NR:ns ## KEGG: ECO103_2658 # Name: yejG # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 114 1 114 114 233 100.0 2e-60 MTSLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGPCGDNSLVALKLLSPDGDNAWSVMYK LSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGVAIAEPFSNYNPF >gi|296918664|gb|GG773036.1| GENE 126 145451 - 147040 332 529 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 268 528 1 261 563 132 33 2e-29 MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIAAGETLALVGESGSGKSVTALSILRLLP CPPVEYLSGDIRFHGESLLHASDQTLRGIRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLS LHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIA DEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNN AATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNV VVKNISFTLRAGETLGLVGESGSGKSTTGLALLRLINSQGSIVFDGQPLQNLNRRQLLPI RHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMHEVGLDPETRH RYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYL FISHDLHVVRALCHQVIVLRQGEVVEQGPCARVFAAPQQEYTRQLLALS >gi|296918664|gb|GG773036.1| GENE 127 147042 - 148067 1083 341 aa, chain - ## HITS:1 COG:ECs3071 KEGG:ns NR:ns ## COG: ECs3071 COG4239 # Protein_GI_number: 15832325 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 647 99.0 0 MSRLSPVNQARWARFRHNRRGYWSLWIFLLLFGLSLCSELIANDKPLLVRYDGSWYFPLL KNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGATSINFATDKPFPSPPSRQ NWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFI EVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQA LGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQG KNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNKAV >gi|296918664|gb|GG773036.1| GENE 128 148067 - 149161 1416 364 aa, chain - ## HITS:1 COG:ECs3070 KEGG:ns NR:ns ## COG: ECs3070 COG4174 # Protein_GI_number: 15832324 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 364 1 364 364 685 100.0 0 MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGVRA SHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLF RSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAI PAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQKITDYLWHITLPVLATVIGGF AALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFT GSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRID FEGR >gi|296918664|gb|GG773036.1| GENE 129 149162 - 150976 1496 604 aa, chain - ## HITS:1 COG:ECs3069 KEGG:ns NR:ns ## COG: ECs3069 COG4166 # Protein_GI_number: 15832323 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 604 3 606 606 1191 99.0 0 MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA LGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAIN PRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRITSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQK NESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA RNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQ QRVNVTTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYD MMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLG RALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSAR QQGE >gi|296918664|gb|GG773036.1| GENE 130 151058 - 152614 1046 518 aa, chain - ## HITS:1 COG:rtn_2 KEGG:ns NR:ns ## COG: rtn_2 COG2200 # Protein_GI_number: 16130114 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 261 518 1 258 258 523 98.0 1e-148 MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVTYDTLITDVQKYLDTYFAD LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE DYDGLALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF LLGGMSGTFVGLLCYYLMSVRMRPGREIMTAIKREQFYVVYQPVVDTQALRVTGLEVLLR WRHPVAGEIPPDAFINFAEAQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPAH LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEREATQLFAWLHSVGVEIAIDDFGT GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW >gi|296918664|gb|GG773036.1| GENE 131 152795 - 153361 358 188 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 65 184 58 174 175 142 57 2e-32 MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVGSETSSLQASQDEFENL VRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEM GKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNE ARRVLSRS >gi|296918664|gb|GG773036.1| GENE 132 153773 - 154486 482 237 aa, chain - ## HITS:1 COG:ECs3066 KEGG:ns NR:ns ## COG: ECs3066 COG0671 # Protein_GI_number: 15832320 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 237 13 249 249 437 100.0 1e-123 MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTN NRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASP TLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFVVF AFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK >gi|296918664|gb|GG773036.1| GENE 133 154525 - 155511 696 328 aa, chain - ## HITS:1 COG:yeiR KEGG:ns NR:ns ## COG: yeiR COG0523 # Protein_GI_number: 16130111 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Escherichia coli K12 # 1 328 1 328 328 646 98.0 0 MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIP GGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATL CILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPESEQALERWWQQNGGDRQLIH SEHGKIDGHLLDLPRRNLAELPASAAHSHQHSVKKGLAALSLPEHQRWRRSLNSGQGHQA CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDS RIELISSSEADWNALQSALLKLRLATPA >gi|296918664|gb|GG773036.1| GENE 134 155629 - 157095 1275 488 aa, chain - ## HITS:1 COG:ECs3064 KEGG:ns NR:ns ## COG: ECs3064 COG0246 # Protein_GI_number: 15832318 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 488 1 488 488 993 98.0 0 MNTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLTDRVLNAQGGDWGICEI SLFSGDQLMSQLRAQNHLYTVLEKGADGNQAIIVGAVHECLNAKLDSLAAIIEKFCEPQV AIVSLTITEKGYCIDPAIGALDTSNPRIIHDLQNPEEPHSAPGILVEALKRRRERGLTPF TVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHVSFPGTMVDRIVPAATNESLAEI SQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVAGVQMVNDVLPWEEMKLRMLNGSHS FLAYLGYLSGFAHISDCMQDRAFRHAARTLMLDEQAPTLRIKDVDLTQYADKLIARFANP ALKHKTWQIAMDGSQKLPQRMLAGIRIHLGRETDWSLLALGVAGWMRYVSGVDDAGNAID VRDPLSDKIRELVAVSSSEQRVTALLSLREIFGDDLPDNPHFVQAIEQAWQQIAQFGAHQ ALLNTLKI >gi|296918664|gb|GG773036.1| GENE 135 157318 - 157890 793 190 aa, chain - ## HITS:1 COG:ECs3063 KEGG:ns NR:ns ## COG: ECs3063 COG0231 # Protein_GI_number: 15832317 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 # 1 190 86 275 275 384 100.0 1e-107 MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDD IVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTW DGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSPGEKIRIHI EERRYMGRAD >gi|296918664|gb|GG773036.1| GENE 136 158045 - 158299 178 84 aa, chain + ## HITS:1 COG:YPO1286 KEGG:ns NR:ns ## COG: YPO1286 COG0727 # Protein_GI_number: 16121569 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Yersinia pestis # 1 84 1 84 84 101 66.0 3e-22 MECRPGCGACCTAPSISSPIPGMPDGKPANTPCIQLDEQQRCKIFTSPLRPKVCAGLQAS AEMCGNSRQQAMTWLIDLEMLTAP >gi|296918664|gb|GG773036.1| GENE 137 158296 - 159477 1098 393 aa, chain - ## HITS:1 COG:ECs3062 KEGG:ns NR:ns ## COG: ECs3062 COG0477 # Protein_GI_number: 15832316 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 693 99.0 0 MHNSPAVTSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGS AVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGS TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAA VAFIVCGVMVWLFLPSMQKELPLATGTVEAPRRNRRDTLLLFVICTLMWGSNSLYIINMP LFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVGGVCFYAGML MAHSPVILLGLQLLNAIFIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSVA GIVAEIWNYHAVFWFAMVMIIATLFCLLRIKDV >gi|296918664|gb|GG773036.1| GENE 138 159844 - 160974 1409 376 aa, chain + ## HITS:1 COG:fruB_1 KEGG:ns NR:ns ## COG: fruB_1 COG4668 # Protein_GI_number: 16130107 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Escherichia coli K12 # 1 286 1 286 286 471 99.0 1e-132 MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGMLAREQQTSTFLGNGIAI PHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDD SVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIVASDLLTLQALNAARLKEAGA VDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVSRAANAFDVDGETAAMLVSVAMN DDQPIAVLKRLADLLLDNKADRLLKADAATLLTLLTSDDAPTDDVLSAEFVVRNEHGLHA RPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQA LKAIGDAIAAGLGEGA >gi|296918664|gb|GG773036.1| GENE 139 160974 - 161912 990 312 aa, chain + ## HITS:1 COG:ECs3060 KEGG:ns NR:ns ## COG: ECs3060 COG1105 # Protein_GI_number: 15832314 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 611 100.0 1e-175 MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGG FLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDFNFSGFEVTPADWER FVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAA PWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIA KPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRPQLA AMMARVDLQPFN >gi|296918664|gb|GG773036.1| GENE 140 161929 - 163620 2064 563 aa, chain + ## HITS:1 COG:fruA_3 KEGG:ns NR:ns ## COG: fruA_3 COG1299 # Protein_GI_number: 16130105 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 226 563 1 338 338 540 98.0 1e-153 MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMAIVLGDSIPNDSALNGK NVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASGPKRVVAVTACPTGVAHTF MAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIVAADIEVDLAKFAGKPM YRTSTGLALKKTAQELDKAVAEATPYEPAGKTQTATTEGKKESAGAYRHLLTGVSYMLPM VVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLT PGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLISTQLKLPQSMEALKPILIIPLISSLVV GLAMIYLIGKPVAGILDGLTHWLQTMGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVG LLSTQTYGPMAAIMAAGMVPPLAMGLATMVARRKFDKAQQEGGKAALVLGLCFISEGAIP FAARDPMRVLPCCIVGGALTGAISMAIGAKLMAPHGGLFVLLIPGAITPVLGYLVAIIAG TLVAGLAYAFLKRPETQIVEKNA >gi|296918664|gb|GG773036.1| GENE 141 164076 - 165017 515 313 aa, chain + ## HITS:1 COG:ECs3058 KEGG:ns NR:ns ## COG: ECs3058 COG0524 # Protein_GI_number: 15832312 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 313 1 313 313 569 88.0 1e-162 MREKDYIVIIGSANIDVAGYSHHPLNYADSNPGKIKFTPGGVGRNIAHNLALLGKNAWLL SAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMSISDCI SAEFLAQHQEFIRGAKVIVADCNLSEEALVWVLENSGETPVFIDPVSAWKCVKIRDHLSK IHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDINGESGW SAPIKTNVINVTGAGDAMMAGLASCWVDGMPFIDSVRFAQGCSSMALACEYTNNPELSIA NVTSLVENTECLN >gi|296918664|gb|GG773036.1| GENE 142 165005 - 165943 946 312 aa, chain + ## HITS:1 COG:ECs3057 KEGG:ns NR:ns ## COG: ECs3057 COG2313 # Protein_GI_number: 15832311 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme involved in pigment biosynthesis # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 550 96.0 1e-156 MSELTLSPELLQISAEVQDALKNKKSVVALESTIISHGMPFPQNAQTAIEVEETIRKQGA VPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIA ALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLET FGVPLIGYQTKALPAFFCRTSPFDVSIRLDSAREIARAMAVKWQTGLNGGLVVANPIPEQ FAMPEETINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILA SEIAKEYQRLVG >gi|296918664|gb|GG773036.1| GENE 143 166037 - 167287 1449 416 aa, chain + ## HITS:1 COG:yeiM KEGG:ns NR:ns ## COG: yeiM COG1972 # Protein_GI_number: 16130102 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli K12 # 1 416 1 416 416 631 98.0 0 MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAA LGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGV MGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRMNRNELFTAICSG MASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFARILSPATEPSQVTFENLSFSETP PKSIIEAAANGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFANVSLESIFGY VLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTSGTLDVKTIAIISFAL CGFANFGSIGVVVGAFSAISPKRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA >gi|296918664|gb|GG773036.1| GENE 144 167354 - 168052 427 232 aa, chain - ## HITS:1 COG:ECs3055 KEGG:ns NR:ns ## COG: ECs3055 COG0664 # Protein_GI_number: 15832309 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 14 232 1 219 219 435 97.0 1e-122 MKEIHNNDLKQQLMSESAFKDCFSTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRA RLYVTLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLN DTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLG VSYRHLLYVLAQFINDGLLIKSKKGYLIKNRKQLSGLALKMYPENKFSGMMQ >gi|296918664|gb|GG773036.1| GENE 145 168182 - 169123 1002 313 aa, chain + ## HITS:1 COG:yeiK KEGG:ns NR:ns ## COG: yeiK COG1957 # Protein_GI_number: 16130100 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli K12 # 1 313 1 313 313 631 99.0 0 MEKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEIN VPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAENTHAVKYIIDTLMASDGDIT LVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTS GVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWG LVEECVRGYIKTH >gi|296918664|gb|GG773036.1| GENE 146 169391 - 170479 747 362 aa, chain - ## HITS:1 COG:yeiI_2 KEGG:ns NR:ns ## COG: yeiI_2 COG0524 # Protein_GI_number: 16130098 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 54 362 1 309 309 558 84.0 1e-159 MNDREKQILKILRRNPLIQQNEIADILQISRSRVAAHIMDLMRKGLIKGKGYILTEQDYC VVVGAINMDIRGMADIRYPQAASHPGSVHCSAGGVGRNIAHNLALLGRDVHLISAIGNDF YGETLLEETRRAGVNVSNCIRLHGHSTATYLAIANKQEETILAINDTHILQQLTPQLLNT SRDLIRHAGVVLADCNLTPEALEWVFTIADEIPMFVDTVSEFKANKVKNWYSRIHTLKPT QNELEILWGQPIKDDNNRIRAVNSLHQQGVKRIFVYLKDESVFCSDKDGEQFLLTAPAHT TVDSFGADDGFMAGLVYSFLEGYSFRDSARFAMACAAISRASGSLNNPTLSADNALSLVP MV >gi|296918664|gb|GG773036.1| GENE 147 170483 - 171340 941 285 aa, chain - ## HITS:1 COG:ECs3051 KEGG:ns NR:ns ## COG: ECs3051 COG0648 # Protein_GI_number: 15832305 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Escherichia coli O157:H7 # 1 285 1 285 285 574 98.0 1e-164 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH YTSAQILPHDSYLINLGHPVAEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT CHAFAAGYDLRTPAECEKTFADFARIVGFKYLHGMHLNDAKSTFGSRVDRHHSLGEGNIG HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA >gi|296918664|gb|GG773036.1| GENE 148 171414 - 172463 1198 349 aa, chain - ## HITS:1 COG:ECs3050 KEGG:ns NR:ns ## COG: ECs3050 COG2855 # Protein_GI_number: 15832304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 573 100.0 1e-163 MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNT IYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLAC FLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAIFL YPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDAENAAVISKMLRVMMLAPF LILLAARVKQLSGANSGEKSKITIPWFAILFIVVAIFNSFHLLPQSVVNMLVTLDTFLLA MAMAALGLTTHVSALKKAGAKPLLMALVLFAWLIVGGGAINYVIQSVIA >gi|296918664|gb|GG773036.1| GENE 149 172562 - 173443 204 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 3 241 1 243 305 83 26 1e-14 MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN EHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPI ELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLARGPVTL EQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRR VIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYCDPANVPR >gi|296918664|gb|GG773036.1| GENE 150 173648 - 175117 1852 489 aa, chain + ## HITS:1 COG:lysP KEGG:ns NR:ns ## COG: lysP COG0833 # Protein_GI_number: 16130094 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 489 1 489 489 907 99.0 0 MGSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGL MVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLV MSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVGVLMIIG IFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPR AVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVM NAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCF LTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDINDLPYRSGFFPMG PIFAFILCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFVRYSE MKFPQNDKK >gi|296918664|gb|GG773036.1| GENE 151 175328 - 177400 2112 690 aa, chain + ## HITS:1 COG:cirA KEGG:ns NR:ns ## COG: cirA COG4771 # Protein_GI_number: 16130093 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Escherichia coli K12 # 28 690 1 663 663 1316 99.0 0 MLPYARGRKEDVSDTHFIFVVTSWRYGMFRLNPFVRVGLCLSAISCAWPVLAVDDDGETM VVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRG LDSSYTLILVDGKRVNSRNAVFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVV NIITKKIGQKWSGTVTVDTTVQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKD DPQNSTTTDTGETPRIEGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLE RQNYSVSHNGRWDYGTSELKYYGEKVENKNPGNSSPITSESNTVDGKYTLPLTAINQFLT VGGEWRHDKLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGEH WSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPETSE SWELGLYYMGEEGWLEGVESSVTVFRNDVKDRISISRTSDVNAAPGYQNFVGFETGANGR RIPVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGRDVSNGENKPLSDLPFHTA NGTLDWKPLALEDWSFYVSGHYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGV LNLGDKDLSRDDYSYNEDGRRYFMAVDYRF >gi|296918664|gb|GG773036.1| GENE 152 177432 - 178268 711 278 aa, chain - ## HITS:1 COG:yeiG KEGG:ns NR:ns ## COG: yeiG COG0627 # Protein_GI_number: 16130092 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli K12 # 1 278 1 278 278 554 98.0 1e-158 MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFT TKAGAQRVAAELGIVLVMPDTSPRGEQVANDDGYDLGQGAGFYLNATQPPWATHYRMYDY LRDELPALIQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWG IKAFSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAAR QKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK >gi|296918664|gb|GG773036.1| GENE 153 178526 - 179194 740 222 aa, chain + ## HITS:1 COG:ECs3045 KEGG:ns NR:ns ## COG: ECs3045 COG0302 # Protein_GI_number: 15832299 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 412 100.0 1e-115 MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHMTEIMQLLNLDLADDSL METPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTVRDITLTSTCEHHFVTIDG KATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTNNVAVSIDAVH YCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAVRHHN >gi|296918664|gb|GG773036.1| GENE 154 179211 - 180368 1076 385 aa, chain + ## HITS:1 COG:Z3408 KEGG:ns NR:ns ## COG: Z3408 COG2311 # Protein_GI_number: 15802708 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 EDL933 # 1 385 44 428 428 669 98.0 0 MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPQDAWTWAFLDLIGQVK FLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWR LVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKHWKLHGGV EAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAI GVIINLPAIALQWRLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLA IACVGRMALTNYLLQTLICTTLFYHLGLFMQFDRLELLAFVIPVWLANIFFSVIWLRYFR QGPVEWLWRQLTLRAAGPTISKTSR >gi|296918664|gb|GG773036.1| GENE 155 180317 - 180520 81 67 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2298 NR:ns ## KEGG: ECS88_2298 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 67 1 67 67 130 100.0 1e-29 MVIIFTTCYEIAVNDCLLAAILSALNTGLRESSHSNGNGYSRFVNECDPDRYLDVLDIVG PAARKVN >gi|296918664|gb|GG773036.1| GENE 156 180510 - 181550 981 346 aa, chain + ## HITS:1 COG:ECs3043 KEGG:ns NR:ns ## COG: ECs3043 COG1609 # Protein_GI_number: 15832297 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 346 1 346 346 659 99.0 0 MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELDYRPNANAQALATQVSD TIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCNALI VHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDNLSGARMATRMLLNNGHQRIG YLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGTPDMPGGEAAMVELLGRNLQLTA VFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIPIARYTDPQLTTVRYPIASMAKLAT ELALQGAADNIDPRASHCFMPTLVRRHSVATRQNAAAITNSTNQAM >gi|296918664|gb|GG773036.1| GENE 157 181830 - 182555 893 241 aa, chain + ## HITS:1 COG:mglB KEGG:ns NR:ns ## COG: mglB COG1879 # Protein_GI_number: 16130088 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 240 1 240 332 430 99.0 1e-120 MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLL MNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRK ALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEA RTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMA R >gi|296918664|gb|GG773036.1| GENE 158 182591 - 182827 393 78 aa, chain + ## HITS:1 COG:ECs3042 KEGG:ns NR:ns ## COG: ECs3042 COG1879 # Protein_GI_number: 15832296 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 78 255 332 332 134 98.0 3e-32 MFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVV RVPYVGVDKDNLAEFSKK >gi|296918664|gb|GG773036.1| GENE 159 182888 - 184408 192 506 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 279 482 17 215 245 78 26 3e-13 MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLF GIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMF VDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSL TEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDK IIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGA KRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGF NSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRW LLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMS NGLVSGIVDTKTTTQSEILRLASLHL >gi|296918664|gb|GG773036.1| GENE 160 184424 - 185434 1289 336 aa, chain + ## HITS:1 COG:mglC KEGG:ns NR:ns ## COG: mglC COG4211 # Protein_GI_number: 16130086 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Escherichia coli K12 # 1 336 1 336 336 485 99.0 1e-137 MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVA GLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIG LINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFVALGS FRLSYITFYALIAVVFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGV FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVIN YGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYARKK >gi|296918664|gb|GG773036.1| GENE 161 185677 - 186912 1187 411 aa, chain - ## HITS:1 COG:yeiA_1 KEGG:ns NR:ns ## COG: yeiA_1 COG0167 # Protein_GI_number: 16130085 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Escherichia coli K12 # 1 326 3 328 328 684 99.0 0 MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPR FDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEELA RLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIG DMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALR FIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGL SHYLADQGFDSLQEMVGLANHNIVPAEDLDRSYIVYPHINLDKCVGCGRCYISCYDGGHQ AMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIDLGEVKFKKGEKEHPVTL >gi|296918664|gb|GG773036.1| GENE 162 186906 - 188144 995 412 aa, chain - ## HITS:1 COG:ECs3038 KEGG:ns NR:ns ## COG: ECs3038 COG0493 # Protein_GI_number: 15832292 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli O157:H7 # 1 412 1 412 412 790 96.0 0 MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAA ETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPG TKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAQPGGWLRNGIPQFRLPQSVLDAE IARIEKMGVTIKCNNEIGKTLTLEQLKAENRAVLVTVGLSSGSGLSLFEHSDVEIAVDFL QRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTS ARELGVSIIDGFTPVAVEGNKVTFKHVRLPGELTIAADKIILAVGQHAELAAFSALEPQR NTIETQHYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAGAIHHYLEGACSC >gi|296918664|gb|GG773036.1| GENE 163 188338 - 188577 260 79 aa, chain - ## HITS:1 COG:no KEGG:G2583_2688 NR:ns ## KEGG: G2583_2688 # Name: yeiS # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 79 1 79 79 135 100.0 7e-31 MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVYVWRAKNPGLFFAYMVA YIGFGILSIGMIVYLIFYR >gi|296918664|gb|GG773036.1| GENE 164 188580 - 189299 783 239 aa, chain - ## HITS:1 COG:ECs3036 KEGG:ns NR:ns ## COG: ECs3036 COG2949 # Protein_GI_number: 15832290 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 447 100.0 1e-126 MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRTG VINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSDIVLDY AGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI REFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPEDAQGYPAVTPEQLLELQKKQGK >gi|296918664|gb|GG773036.1| GENE 165 189449 - 190333 879 294 aa, chain - ## HITS:1 COG:cdd KEGG:ns NR:ns ## COG: cdd COG0295 # Protein_GI_number: 16130081 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Escherichia coli K12 # 1 294 1 294 294 540 99.0 1e-153 MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSATGLDEDALAFALLPLA AACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALA AITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDYLPDAFGPKDLEIKTLLMDEQ DHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPL QGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLKALGCHNIDRVLLA >gi|296918664|gb|GG773036.1| GENE 166 190463 - 191158 758 231 aa, chain - ## HITS:1 COG:yohK KEGG:ns NR:ns ## COG: yohK COG1346 # Protein_GI_number: 16130080 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Escherichia coli K12 # 1 231 1 231 231 383 100.0 1e-106 MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSE VLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIA ASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLA MGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILAVMG >gi|296918664|gb|GG773036.1| GENE 167 191155 - 191553 382 132 aa, chain - ## HITS:1 COG:yohJ KEGG:ns NR:ns ## COG: yohJ COG1380 # Protein_GI_number: 16130079 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Escherichia coli K12 # 1 132 1 132 132 218 100.0 2e-57 MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGMLILFVLLALQILPAKWV NPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAVSTLVVFLVVSWSSQLVHG ERKVVGQKGSEE >gi|296918664|gb|GG773036.1| GENE 168 191792 - 192742 986 316 aa, chain + ## HITS:1 COG:ECs3026 KEGG:ns NR:ns ## COG: ECs3026 COG0042 # Protein_GI_number: 15832280 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 641 99.0 0 MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTP SGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIY QGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEH IDWQAIGEIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYN EPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNS PDIARAIQAIDIDKLR >gi|296918664|gb|GG773036.1| GENE 169 193437 - 194873 1245 478 aa, chain + ## HITS:1 COG:ECs3025 KEGG:ns NR:ns ## COG: ECs3025 COG1538 # Protein_GI_number: 15832279 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 1 478 28 505 505 874 98.0 0 MNRDSFYPAIACFPLLLMLAGCAPMHETRQVLSQQTPAAQVDTVLPTALKNGWPDSQWWL EYHDNQLTSLINNALQSAPDMQVAEQRIQLAEAQAKAIATQDGPQLDFSADMERQKMSAE GLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQT RQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDINA SKTRQQLNDVAGKMKIIEARLNALTNHQTKSLKLKPVALPKVASQLPDELGYSLLARRAD LQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPI FDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIERDAL RVVGLAQARFNAGLIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGYKR >gi|296918664|gb|GG773036.1| GENE 170 194926 - 195687 196 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 57 241 52 238 242 80 31 1e-13 MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTARKVVSHGVRAEIVQLD LGNLPEGAQALEKLIQRLWRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQ IAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNA VAPGAIATPMNGMDGGDVKPDAEPSIPLRRFGTTHEIASLVAWLCSEGANYTTGQSLIVD GGFMLANPQFKPE >gi|296918664|gb|GG773036.1| GENE 171 195807 - 196385 657 192 aa, chain - ## HITS:1 COG:yohD KEGG:ns NR:ns ## COG: yohD COG0586 # Protein_GI_number: 16130074 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli K12 # 1 192 13 204 204 333 99.0 1e-91 MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLY LCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPP KIFLPLNILGAFAWSLIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWL KRRGKKKPDHQA >gi|296918664|gb|GG773036.1| GENE 172 196555 - 197142 602 195 aa, chain + ## HITS:1 COG:no KEGG:APECO1_4414 NR:ns ## KEGG: APECO1_4414 # Name: yohC # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 195 9 203 203 338 100.0 1e-91 MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTI LKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLS GLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVL LALTVILWGYGYRLF >gi|296918664|gb|GG773036.1| GENE 173 197316 - 198248 1077 310 aa, chain + ## HITS:1 COG:pbpG KEGG:ns NR:ns ## COG: pbpG COG1686 # Protein_GI_number: 16130072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli K12 # 1 310 4 313 313 530 99.0 1e-150 MPKFRVSLFSLALMLAVPFAPQAVAKTVAATTASQPEIASGSAMIVDLNTNKVIYSNHPD LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVYSRVRLNSEISRKDMLLLA LMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGLSVHNVSTARDLTK LLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGH CLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTWIETGKVMPVPAAALSYKKQKAAQM AAAGQTAQND >gi|296918664|gb|GG773036.1| GENE 174 198287 - 200002 1615 571 aa, chain - ## HITS:1 COG:ECs3020 KEGG:ns NR:ns ## COG: ECs3020 COG0277 # Protein_GI_number: 15832274 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli O157:H7 # 1 571 1 571 571 1167 99.0 0 MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQGDALAVVFPGSLLELWR VLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTLRLDKLHVLGKGEQVLAYP GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARIN EDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTP ARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANF ENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPH FTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMAGDGVGEAKSWLVDYFKQAEGDFF VCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWYEHLPPEIDSQ LVHKLYYGHFMCYVFHQDYIVKKGVDVHVLKEQMLELLQQRGAQYPAEHNVGHLYKAPET LQKFYRENDPTNSMNPGIGKTSKRKNWQEVK >gi|296918664|gb|GG773036.1| GENE 175 200198 - 202495 2669 765 aa, chain + ## HITS:1 COG:bglX KEGG:ns NR:ns ## COG: bglX COG1472 # Protein_GI_number: 16130070 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli K12 # 1 765 1 765 765 1507 99.0 0 MKWLCSVGIAVSLALQPALADDLFGNHPLTPEARDAFVTELLKKMTVDEKIGQLRLISVG PDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVF PISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYL TSIMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTA ADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKSGKVTMEELDDAARHVLNVKYDMGLFN DPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKNRLETLPLKKSATIAVVGPLA DSKRDVMGSWSAAGVADQSVTVLTGIKNAVGENGKVLYAKGANVTSDKGIIDFLNQYEEA VKVDPRSPQEMLDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKA TGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFP RSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSA PTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL >gi|296918664|gb|GG773036.1| GENE 176 202685 - 203602 1047 305 aa, chain + ## HITS:1 COG:yehZ KEGG:ns NR:ns ## COG: yehZ COG1732 # Protein_GI_number: 16130069 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Escherichia coli K12 # 1 305 1 305 305 541 96.0 1e-154 MPLSKVWAGSLVLLAAVSLPLQAASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQ LGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDTAWKNAQQGYEKVKKLDAEQNKLIW LTPAPANNTWTIAVRQDVAEKNKLTSLAELSRYLKEGGNFKLAASAEFIERADALPAFEK AYGFKLGQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPQGVQ PIYAPAPVVRESVLKEYPQIAQWLQPVFASLDEKTLQQLNASIAVEGLDAKKVAADYLKQ KGWTK >gi|296918664|gb|GG773036.1| GENE 177 203609 - 204766 1273 385 aa, chain + ## HITS:1 COG:yehY KEGG:ns NR:ns ## COG: yehY COG1174 # Protein_GI_number: 16130068 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Escherichia coli K12 # 1 385 1 385 385 599 98.0 1e-171 MTYFRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQLWPQTLWMLVGVGCAWL TACFIPAKKGSIFALILAQFVFVLLVWGAGKAATQLAQNGSALARTSLGSGFWLAAALAL LACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQH LTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSIALFGLLIAPLAALVT AFPWLGMLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGVQRF LHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAGGFGALVFQGLLSSAIDLVLLGVIP VIVLAVLTDALFDLLIALLKVKRND >gi|296918664|gb|GG773036.1| GENE 178 204759 - 205685 1139 308 aa, chain + ## HITS:1 COG:yehX KEGG:ns NR:ns ## COG: yehX COG1125 # Protein_GI_number: 16130067 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Escherichia coli K12 # 1 308 1 308 308 577 97.0 1e-165 MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGVIRF AGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDELMAL LGLEPNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQEMTRI HRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPTNDFVRQFFGHSEL GVRLLSLRSVADYVRREERAEGEALAEEMTLRDALSLFVARGCEVLPVVNTQGEPCGTLH FQDLLEEA >gi|296918664|gb|GG773036.1| GENE 179 205690 - 206421 876 243 aa, chain + ## HITS:1 COG:ECs3015 KEGG:ns NR:ns ## COG: ECs3015 COG1174 # Protein_GI_number: 15832269 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Escherichia coli O157:H7 # 1 243 1 243 243 376 98.0 1e-104 MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGIS SLFAVIIGTGAGIAVTRPWGAGFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLKPAIIA LILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVI INIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLVQAFSQ HAK >gi|296918664|gb|GG773036.1| GENE 180 206402 - 206509 182 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG >gi|296918664|gb|GG773036.1| GENE 181 206569 - 207300 646 243 aa, chain - ## HITS:1 COG:yehV KEGG:ns NR:ns ## COG: yehV COG0789 # Protein_GI_number: 16130065 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 243 1 243 243 460 98.0 1e-129 MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNG VQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHL FIPLRRRLQCQQATLQALLAILDGVLINYISICLASARKKQGKDALVVGWNIQDTTRLWL EGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGDNRTSAQQQQLTSWQEQGHDIFP LGI >gi|296918664|gb|GG773036.1| GENE 182 207522 - 209207 1143 561 aa, chain + ## HITS:1 COG:yehU KEGG:ns NR:ns ## COG: yehU COG3275 # Protein_GI_number: 16130064 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Escherichia coli K12 # 1 561 1 561 561 1078 100.0 0 MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWF GLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLL GGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMM VTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLY QELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCS LHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQY ERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRP SEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGT SQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGIS VACEPDSYTRITLRLPWRDEA >gi|296918664|gb|GG773036.1| GENE 183 209204 - 209923 829 239 aa, chain + ## HITS:1 COG:ECs2936 KEGG:ns NR:ns ## COG: ECs2936 COG3279 # Protein_GI_number: 15832190 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 239 6 244 244 459 100.0 1e-129 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL >gi|296918664|gb|GG773036.1| GENE 184 209970 - 210440 453 156 aa, chain + ## HITS:1 COG:ECs2935 KEGG:ns NR:ns ## COG: ECs2935 COG4807 # Protein_GI_number: 15832189 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 300 100.0 7e-82 MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSF LNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTDDILAILTEQQFRVSMPEI TAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS >gi|296918664|gb|GG773036.1| GENE 185 210494 - 210955 543 153 aa, chain - ## HITS:1 COG:ECs2934 KEGG:ns NR:ns ## COG: ECs2934 COG4808 # Protein_GI_number: 15832188 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 153 5 157 157 246 99.0 1e-65 MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETK IQFASIGATTKEDAARTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQG ISGINVSAEDAKKGITMAQMELVMKAAGFKEVK >gi|296918664|gb|GG773036.1| GENE 186 211080 - 213083 1026 667 aa, chain - ## HITS:1 COG:ECs2931 KEGG:ns NR:ns ## COG: ECs2931 COG2801 # Protein_GI_number: 15832185 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 667 1 667 745 1252 95.0 0 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENGALIATFSDGVRTQLA NGQALKEAQCTCGASGMCRHRVMLVLSYQRLCATAQPTEKKEEEWDPAIWLKELATLPDA TRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVL AVQAFVEAKTQQAEFTHLIWQMRSEHVTSSDDPFASEEGKTCRQYVQQLSQALWLGGISQ PPIHYEAAFSRAQQAAERCNWRWVSESLRQLRASVDAFHARASHYHAGECLRQLAALNSR LNCVQEMARRDSIGEVPPMPWRTVVGAGIAGEAKLDHLRLVSLGMRCWQDIEQYGLRIWF TDPDTGSILHLSRSWQRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLFAT RNRLSGVVPLSPDAWLMLSAPLRQPGIVALREYLRQRPPACIRPINQVDNLFILPIAECI SLGWDSSRQTLDAQVISGEGEDNVLTLSLPASACSPFAVERMAALLQQTDDPVSLVSGFV SFVEGQLTLEPRVMMTKTRAWALDAETAPVAPLPSASVLPVPSTAHQLLMRCQALLIQLL HNGWRYQEQSAIGQAELLANDLTAVGFYRLAHVLGQFRNTESEARVEAMNNGVLLCEQLF PMLQQQG >gi|296918664|gb|GG773036.1| GENE 187 213080 - 214216 915 378 aa, chain - ## HITS:1 COG:no KEGG:APECO1_4428 NR:ns ## KEGG: APECO1_4428 # Name: yehN # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 378 71 448 448 759 100.0 0 MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERYG GLGRSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRA VLHTKHLMNPEVLAAARRIVHQVVEEIMARLAKEVRQAFSGVRDRRRRSFISLARNFDFK STLRANLQHWHPQHGKLYIESPRFNSRIKRHSEQWQLVLLVDQSGSMVDSVIHSAVMAAC LWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKS VIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSNATPCYDHDTAQALVNVGAQI AAMTPGELASWLAENLQS >gi|296918664|gb|GG773036.1| GENE 188 214209 - 216485 1394 758 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2263 NR:ns ## KEGG: ECS88_2263 # Name: yehM # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 758 1 758 758 1428 100.0 0 MYERAVNCRHHSPACARLAKSLIESQRPRYVLIEGPADFNDRIDELFLAHQLPVAIYSYC QYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDLPCWAQSEEEDDSPDTQDES QTLLLRDTRMDNSDTLWDHLFEDESQQTALPSALARYFAQLRGDSPGDALNRQREAFMAR WITWAMQQNNGDVLVVCGGWHAPALANMWRECPQEINKPELSSLADAVTGCYLTPYSEKR LDVLAGYLSGMPAPVWQNWCWQCGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHAM ALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPLPWSYRGVIHPDTDPILVTLIDTLAGDG FGKLAPSTPQPPLPKDVTCELERTGISLPAELTLNRFTPDGLAQSQVLHRLAILEIPGVV RQQGSTLSLAGNGEECWKLTRPLSQHAALIEAACFGATLQEAARHKLEADMLDAGGIGCI TTCLSQAALAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWRLDEISGMQGAQI LQMTLCAAIDRTLWLCESNGRPDEKEFHTHLHSWQALCHILRDLHSGVNLPGVSLSAAVA LLERRSQAIHAPALDRGATLGALMRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALAR HQLACQPVFIAGFSSHLNQLSDADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLVQL PVSALQMPLHCPPQDIAHHQQLEQQALASLQHWGVFHV >gi|296918664|gb|GG773036.1| GENE 189 216492 - 217580 1027 362 aa, chain - ## HITS:1 COG:ECs2927 KEGG:ns NR:ns ## COG: ECs2927 COG0714 # Protein_GI_number: 15832181 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Escherichia coli O157:H7 # 1 362 23 384 384 710 99.0 0 MSPQNNHLQRPPAAVLYAVELAKLKQNDNAPCPPGWQLSLPAARAFILGDEAQNISRKVV ISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISGDAGLTIQGGASTTEDQIK YGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITRTPLEVQDCLLGMLSDRVMTV PELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKRRFDFETVFPIMDFAQELELVAS ASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEKKTSMDTLTAIMSTAEAVNVAHAVG VRAWFLANRAGEPADLVDCIAGTIVKDNEEDRARLRRYFEQRVATHKEAHWQAYYQARHR LP >gi|296918664|gb|GG773036.1| GENE 190 218011 - 218100 73 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDTLTQKLTVLIAVLELLVALLRLIDLLK >gi|296918664|gb|GG773036.1| GENE 191 218491 - 218676 77 61 aa, chain - ## HITS:1 COG:no KEGG:SF2187 NR:ns ## KEGG: SF2187 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri # Pathway: not_defined # 1 60 1 60 135 114 93.0 2e-24 MIVQKELVAIYDYEIPVPEEPFSFRLEIHKCSELFTGSVYRLERFRLHPTFHQRDREDAD H >gi|296918664|gb|GG773036.1| GENE 192 218737 - 222369 2535 1210 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2258 NR:ns ## KEGG: ECS88_2258 # Name: yehI # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 1210 1 1210 1210 2372 99.0 0 MDKELPWLADNAQLELKYKKGKTPLSHRNWPGEPVPVITESIIQTLSDELLQKAEKKKNI VWRYENFSLEWQSAITQAINLIGEHKPSITARTMAALACIAQNDSQQLLDEIVQQEGLEY ATEVVIARQFIVRCYESDPLVVTLQYQNEDYGYGYRSETYNEFDLRLRKHLSLAEETCWQ RCADKLIAALPGITKVRRPFIALNLPEKPEIANELVSLECSQTHFRSKEWLKVVADDPKA VKELARYWSQDIFSDREASYMSHENHFGYAACAALLREQGLAAVPRLAMYAHKEDCGSLL VQINHPQVIRTLLLVADKNKPSLQRVAKYSKNFPHATLAALAELLALKAPPARPGYPIIE DKKLPAQQKARDEYWHTLLQTLMASQPQLAEEVMPCLSTQAQAVVNGYLSASPKLAFEST HSNDLPEILVSPPWRGKKKTALLRLDLVPLELAPKARWQPGERERLAATESARYFSTGSF TERMERKSGRVVLQELGFGDDVWLFRNYILPGKLDAARKSLVGQWHYSPRRVEEINNGWH STEAKSAEQALRSGDVEALINTWENDSYSRYRPEKSVWNLYLLAQLPREMALTFWLRINE KKHLFAGEDYFLSILGLDTLPGLLLAFSHHPKETFPLILNFGATELALPVARVWRRFAAQ RDLARQWILQWPEHTATALIPLVFTKPCDNSEAALLALRLLYEQGHGELLQTVANRWQRT DVWPALEQLLKLGPIEIYPARIPKTPDFWHPAMWSRPRLIKNNQPVTDDALEIIGEMLRF TQGGRFYGGLEQLKTFCQPQTLAAFAWDLFTAWQQAGAPAKDNWAFLALSLFGDESTARD LTTQILAWPQEGKSARAVSGLNILTKMNNDMALIQLHHISQRAKSRPLRDNAAEFLQVVA ENRGLSQEELADRLVPTLGLDDPQALIFDFGPRQFTVRFDENLNPVIFDQQNVRQKSVPR LRADDDQLKTPEALARLKGLKKDATQVSKNLLPRLETALRTTRRWSLADFHSLFVNHPFT RLVTQRLIWGVYPANEPRRLLNAFRVAAEGEFCNEQDEPIDLPADALIGIAHPLEMTAEM RSEFAQLFADYEIMPPFRQLTRRTVLLTPDESASNSLNRWEGKSATVGQLMGMRYKGWES GYEDAFVYDLGAYRLVLKFSPGFNHYSTDSKALMSFRSLRVYRDNKSVTFAELDVFDLSE ALSAPDVIFH >gi|296918664|gb|GG773036.1| GENE 193 222379 - 226158 2101 1259 aa, chain - ## HITS:1 COG:molR_g1_1 KEGG:ns NR:ns ## COG: molR_g1_1 COG3831 # Protein_GI_number: 16130053 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 112 1 112 112 193 91.0 2e-48 MRHFIYQDEKSHKFWAVEQQGNELHISWGKVGTQEQSQVKSFADAVAAEKAELKLIAEKV KKGYVEQAKDNSLQPSQTVTDSLKVADLSTIIQEQPSFVAETRAADKNTDAVLPWLAKDI AVVFPPEVVHTTLSHRRFPGVPVQQADKLTQLRRLACSVSQRDNTTATFDFSACSLEWQN TVAQAISQIDDLKTTQLPSPVMAVLTALEMKCTRYKEREDVMDQIIQEGGLEYATDVIIH LQQISIEWDYVNNNIVFLSSGISPDYLQQYSSFELRLRKHLSLAEESLWQKCAQKLIAAV PHIPEWRQPLIALLLPEKPEIAHEIAQRLLGQKKLPSLEWLKIVATDEHILASLEKYHEP YAIFDDYYCGAIWSATVLQEQGVAALPRFAPYVASDYCADVLRHINHPFALTLLIRVAGH TKRCHDRMTKACAAFPHAALAELLVQKEENSWRIMLMTMLISQPTLAEQVIPWLSTPAVA VLKSCQQQLTQPSNHASADLLPAIVVSPPWLSKKKKSPIPVLDLAPLNLESICTITDTEA KEFQTHWDWEPHKPGEGAKNFLYSLGYRRWDFDTYKYIGASDSAIDAWEREDFATLIQMF KAHHAPYQGEWHLNSLPFLPMQKAIKLWEFLSKEPHTAIKPVMLYLRLAGMSGFLHSFSR YPQEGFAVANYFAATELAPAVARAFNKLKTLRQDASSWLLKYPEHAITGLLPAALGKASE AQDNARAALRMLTENGHQPLLQEIARRYNQPEVTDAVNALLALDPLDNHPTKIPTLPTFY QPSLWTRPLLKANAQSLPDSALLHLGEMLRFPQEEALYPGLLQVKDACTTDSLAEFAWDL FTAWQTAGAPSKESWAFTALGVLGNDDTARKLTPLIRAWPGESQHKRATVGLDILAAIGS DIALMQLNGIAQKLKFKALQERAKEKIADIAESRELTVAELEDRLAPDLGLDDNGSLLLD FGPRQFTVSFDETLKPFVRDASGSRLKDLPKPNKSDDESQANDAVNRYKLLKKDARTVAA QQVARLESAMCLRRRWSPENFQLFLVEHPLVRHLTHRLIWGVYSAENQLLACFRVAEDNS YSTADDDLFTLPEGDISIGIPHVLEISPTDAAAFGQLFADYELLPPFRQLDRNSYALTEA ERNASELTRWTGRKCPSGRVMGLANKGWIKGTPQDAGWIGWMINPLGRWSLIMEIDEGFA VGMSPAELSAEQLLSKLWLWEGKAESYGWGSNSTQEAQFSVLDAITASELINDIEALFE >gi|296918664|gb|GG773036.1| GENE 194 226354 - 228387 2433 677 aa, chain - ## HITS:1 COG:ZmetG_1 KEGG:ns NR:ns ## COG: ZmetG_1 COG0143 # Protein_GI_number: 15802593 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Escherichia coli O157:H7 EDL933 # 1 567 1 567 567 1202 99.0 0 MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIM LKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFI KNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSG ATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFG FEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDKYWKKDSTAELYHFIGKDIVY FHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYY TAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQLYK TFTDAAEVIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSM GINLFRVLMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQV EALVEASKEEVKATAAPVTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLR LTLDLGGEKRNVFSGIRSAYPDPQALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKD IFLLSPDAGAKPGHQVK >gi|296918664|gb|GG773036.1| GENE 195 228519 - 229628 1012 369 aa, chain + ## HITS:1 COG:ECs2919 KEGG:ns NR:ns ## COG: ECs2919 COG0489 # Protein_GI_number: 15832173 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 1 369 11 379 379 726 100.0 0 MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAWMDDTLHVELVMPFVWH SAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPGINGVKNIIAVSSGKGGVG KSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLAT NSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPV TGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEK LAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVI PGEISFRAV >gi|296918664|gb|GG773036.1| GENE 196 229891 - 230172 236 93 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2254 NR:ns ## KEGG: ECS88_2254 # Name: yehE # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 93 1 93 93 186 100.0 4e-46 MNKYWLSGIIFLAYGLASPAFSSETATLTINGRISPPTCSMAMVNGQPQQHCGQLTYNVD TRHQVSSPVKGVTTEVIAADSDSKRRIVLNRYD >gi|296918664|gb|GG773036.1| GENE 197 230465 - 231007 421 180 aa, chain + ## HITS:1 COG:yehD KEGG:ns NR:ns ## COG: yehD COG3539 # Protein_GI_number: 16130049 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 180 1 180 180 307 96.0 5e-84 MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSLSINMPTVPTT VFEGKAKYSTYDGAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGYY LYLGDNSDVLDVSAPFNIESYKTADGQYAIPFKAKYLKLTDNSVNSGDVLSSLIMRVAQD >gi|296918664|gb|GG773036.1| GENE 198 231088 - 231756 442 222 aa, chain + ## HITS:1 COG:yehC KEGG:ns NR:ns ## COG: yehC COG3121 # Protein_GI_number: 16130048 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 222 16 239 239 400 96.0 1e-112 MKGLLALLISSMVLPAHAGIVIYGTRIIYPAEHKEVMVQLMNQGNRSSLMQAWIDDGDTS LPPEKIQVPFMLTPPVAKIGANSGQQVKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKN ALKFAMQNRIKLFYRPAGIAPVNKVTFKKLLVNRSGNGLVIKNDSANWVTISDVKANNVK VNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI >gi|296918664|gb|GG773036.1| GENE 199 231772 - 234252 1383 826 aa, chain + ## HITS:1 COG:yehB KEGG:ns NR:ns ## COG: yehB COG3188 # Protein_GI_number: 16130047 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 826 1 826 826 1591 96.0 0 MLRMPPLASAIVALLIGIEAYAAEETFDTHFMIGGMKDQQVSNIRLEDNQPLPGQYDIDI YVNKQWRGKYEIIVKDNPQETCLSREMIKRLGINTDSFASGKQCLTFKQLIQGGSYTWDI GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYMSQYYSDYKASGNSKSTYVRF NSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ VGHQYGFNNLLTLYGGSMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQS YQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDIYDIADYYQND FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNLRRISYTLAASH AYDENHHEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGVASNNTGLSGTVGSR DQFNYGVNLSYQYQGNETTAGANLTWNAPVATVNGSYSQSSAYRQAGASVSGGIVAWSGG VNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENYLMLDVSQSDS EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQPLTFGYEVNDIHGHNIGVV GQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ >gi|296918664|gb|GG773036.1| GENE 200 234463 - 235302 264 279 aa, chain + ## HITS:1 COG:no KEGG:E2348C_2254 NR:ns ## KEGG: E2348C_2254 # Name: yehA # Def: predicted fimbrial protein-like protein # Organism: E.coli_0127 # Pathway: not_defined # 1 279 66 344 344 456 100.0 1e-127 MSPSDIIVGLYNDTIKLNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAG GGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGGKSWDACVNSYRNALAQNAGVYSFNL TLSYNPITTTCKPDDLLITLESIPVSQLPATGNKTTINSKKGDIILRCKNLLGQQNQTSR KMQVYLSSSDLLTNSNTILKGAEDNGVGFILESNGTPVTLLNITNSSKGYTNLKEIAAKS KLTDTTVSIPITASYYVYDTNKVKSGALEATALINVKYD >gi|296918664|gb|GG773036.1| GENE 201 235384 - 235722 287 112 aa, chain - ## HITS:1 COG:yohN KEGG:ns NR:ns ## COG: yohN COG5455 # Protein_GI_number: 16130045 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 112 61 172 172 209 100.0 1e-54 MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYR TDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR >gi|296918664|gb|GG773036.1| GENE 202 235941 - 236765 646 274 aa, chain - ## HITS:1 COG:ZyohM KEGG:ns NR:ns ## COG: ZyohM COG2215 # Protein_GI_number: 15802585 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 EDL933 # 1 274 1 283 283 449 91.0 1e-126 MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIAIKGTIKQAVMLGLAAT ISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIISTAFWMFWRTWRGERNWLENM HEHDHEHHHHDHEDHHDHGHHHHHEHGEYQDAHARAHANDIKRRFDGREVTNWQILLFGL TGGLIPCPAAITVLLICIQLKALTLGATLVVSFSLGLALTLVTVGVGAAISVQQVAKRWS GFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR >gi|296918664|gb|GG773036.1| GENE 203 236886 - 237158 360 90 aa, chain + ## HITS:1 COG:ECs2911 KEGG:ns NR:ns ## COG: ECs2911 COG1937 # Protein_GI_number: 15832165 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 146 100.0 1e-35 MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLMREVIKGH LTEHIVHQGDELKREEDLDVVLKVLDSYIK >gi|296918664|gb|GG773036.1| GENE 204 237462 - 238169 460 235 aa, chain + ## HITS:1 COG:ECs2907 KEGG:ns NR:ns ## COG: ECs2907 COG2145 # Protein_GI_number: 15832161 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Escherichia coli O157:H7 # 1 235 28 262 262 400 94.0 1e-112 MTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMSAAVE QATRSQTPWTLDPVAVGALDYRRRFCVELLSHKPTAIRGNASEIMALAGVANGGRGVDTT DAAANAIPAAQTLARETGAIVVVTGEVDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVV AACCALPGDTLENIASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA >gi|296918664|gb|GG773036.1| GENE 205 238166 - 238966 644 266 aa, chain + ## HITS:1 COG:thiD KEGG:ns NR:ns ## COG: thiD COG0351 # Protein_GI_number: 16130041 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Escherichia coli K12 # 1 266 1 266 266 515 99.0 1e-146 MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQNTRGVQSVYRIEPDFV AAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNVVLDTVMLAKSGDPLLSPS AVATLRSRLLPHVSLITPNLPEAAALLDAPHARTEQEMLEQGRSLLAMGCGAVLMKGGHL DDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAALAALRPRHTNWADTVQEAKSWL SSALAQADTLEVGHGIGPVHHFHAWW >gi|296918664|gb|GG773036.1| GENE 206 239031 - 239849 636 272 aa, chain + ## HITS:1 COG:yegX KEGG:ns NR:ns ## COG: yegX COG3757 # Protein_GI_number: 16130040 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Escherichia coli K12 # 1 272 4 275 275 547 98.0 1e-156 MQLRITSRKKFTVLLCALGLISIVAIYPRQTVNFFYSTAIQIKDYIHFYGYRPVKSFAIR IPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKATEGEKLVDPYFSRNWQLSR ENGLLRGAYHYFSPSVSASVQARLFLQTVDFSQGDFPAVLDVEERGKLSAKELRKRVSQW LKMVEKRTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAHYYQRRPDNDGMAWRFWQHSDRG QVDGINGPVDFNVFNGTVEELQAFVDGIKETP >gi|296918664|gb|GG773036.1| GENE 207 239901 - 240647 565 248 aa, chain + ## HITS:1 COG:ECs2904 KEGG:ns NR:ns ## COG: ECs2904 COG2188 # Protein_GI_number: 15832158 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 476 99.0 1e-134 MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVS RITVRKAMQSLEEEGVVTRSRGYGTQINNIFEYSLKEARGFSQQVVLRGKKPDTLWVNKR VVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESWVPAHLIHDVDAIGISLYDYF RSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVIKQVALDQQQRPIEYSISHCRSD LYVFVCEE >gi|296918664|gb|GG773036.1| GENE 208 240621 - 241586 829 321 aa, chain - ## HITS:1 COG:ECs2903 KEGG:ns NR:ns ## COG: ECs2903 COG0524 # Protein_GI_number: 15832157 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 626 97.0 1e-179 MSGARLHTLLPELATHQPVMVVGAAVIDVIADAYALPWRGCDIELKQQSVNVGGCALNIA VALKRLGIEAGNALPLGQGVWAEIIRNRMAKEDLISLIDNAEGDNGWCLALVEPDGERTF MSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGELLVEWLEKLQDVTPFIDFGPR IGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDK EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNAVASWVV GHRGGDCAPTREELLLAHKNV >gi|296918664|gb|GG773036.1| GENE 209 241583 - 242587 1012 334 aa, chain - ## HITS:1 COG:yegU KEGG:ns NR:ns ## COG: yegU COG1397 # Protein_GI_number: 16130037 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Escherichia coli K12 # 1 334 1 334 334 641 99.0 0 MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPGPKENNAACYFNRAEFT DDTSMALCLADALLEREGKIDPDLIGRNILDWALRFDAFNKNVLGPTSKIALNAIRDGKP VAELENNGVTNGAAMRISPLGCLLPARDVDSFIDDVALASSPTHKSDLAVAGAVVIAWAI SRAIDGESWSAIVNSLPSIARHAQQKRITTFSASLAARLEIALKIVRNADGTESASEQLY QVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCANLGGDTDTIGAMATAICGALHGVNA IDPALKAELDAVNQLDFNRYATALAKYRQQREAI >gi|296918664|gb|GG773036.1| GENE 210 242584 - 243858 1367 424 aa, chain - ## HITS:1 COG:yegT KEGG:ns NR:ns ## COG: yegT COG0477 # Protein_GI_number: 16130036 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 424 1 425 425 755 99.0 0 MKTTALSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYACTAIAAILSPILVGSIT DRFFSAQKVLAVLMFAGAVLMYFAAQQTTFAGFFPLLLAYSLTYMPTIALTNSIAFANVP DVERDFPRIRVMGTIGWIASGLACGFLPQMLGYADISPTNIPLLITAGSSALLGVFAFFL PDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCSFLFAMPLAFYYIFANGYLTEVGM KNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLVTAAIRYGFFIYGSADEYFTYA LLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMRTAAQGLITLCCQGFGSLLGYRLGGVMM EKMFAYQEPVNGLTFNWAGMWTFGAVMIAIIAVLFMIFFRESDNEITAIKVDDRDIALTQ GEVK >gi|296918664|gb|GG773036.1| GENE 211 244115 - 245167 1073 350 aa, chain + ## HITS:1 COG:ECs2900 KEGG:ns NR:ns ## COG: ECs2900 COG1830 # Protein_GI_number: 15832154 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Escherichia coli O157:H7 # 1 350 25 374 374 695 100.0 0 MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTG RLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVS RRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIE EISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLS DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA >gi|296918664|gb|GG773036.1| GENE 212 245396 - 246250 606 284 aa, chain + ## HITS:1 COG:ECs2899 KEGG:ns NR:ns ## COG: ECs2899 COG0191 # Protein_GI_number: 15832153 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 1 284 3 286 286 550 97.0 1e-157 MYVVSTKQMLNNARRGGYAVPAFNIHNLETMQVVVETAASMHAPVIIAGTPGTFTHAGTE NLMALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVMIDASHLPFAQNISRVKEV VDFCHRFDVSVEAELGQLGGQEDDVQVNEADAFYTNPVQAREFAEATGIDSLAVAIGTAH GMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDIQQTIKLGICKINVATELKNAFS QALKNYLTEYPEATDPRDYLQSAKSAMRDVVSKVIADCGCEGRA >gi|296918664|gb|GG773036.1| GENE 213 246279 - 247541 1064 420 aa, chain + ## HITS:1 COG:ECs2898 KEGG:ns NR:ns ## COG: ECs2898 COG4573 # Protein_GI_number: 15832152 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Escherichia coli O157:H7 # 1 420 1 420 420 819 96.0 0 MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMT PADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENADAAMEKSVELVKAYVRAGFSK IHLDASMSCADDSIPLAPETVAERAAVLCLAAESVATDCQREQLNYVIGTEVPVPGGEAS AIQSVHITQVEDAANTLRTHQKAFIARGLAEALTRVIAIVVQPGVEFDHSNIIHYQAQEA QALAQWIEKTKMVYEAHSTDYQTQTAYRELVRDHFAILKVGPALTFALREAIFALAQIEQ ELIAPENRSRCLAVIEEVMLDEPQYWKKYYRTGFNDSLLGIRYSLSDRIRYYWPHSRIKN SVETMMVNLEGVDIPLGMISQYLPKQFERIQSGELSAIPHQLIMDKIYDVLRAYRYGCAE >gi|296918664|gb|GG773036.1| GENE 214 247551 - 248003 208 150 aa, chain + ## HITS:1 COG:ECs2897 KEGG:ns NR:ns ## COG: ECs2897 COG1762 # Protein_GI_number: 15832151 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 291 98.0 3e-79 MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALITREAEFPTGIMLQQHAIAI PHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVAVSLVIALIVENPQQQLKLLRCLFGKL QQPDIVETLITLPETQLKEYFTKYVLDSDE >gi|296918664|gb|GG773036.1| GENE 215 248034 - 248318 288 94 aa, chain + ## HITS:1 COG:ECs2896 KEGG:ns NR:ns ## COG: ECs2896 COG3414 # Protein_GI_number: 15832150 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Escherichia coli O157:H7 # 1 94 1 94 94 179 98.0 2e-45 MKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARV DRSFGNIPLVHGMPFVSGVGIEALQNKILTILQG >gi|296918664|gb|GG773036.1| GENE 216 248322 - 249677 1513 451 aa, chain + ## HITS:1 COG:ECs2895 KEGG:ns NR:ns ## COG: ECs2895 COG3775 # Protein_GI_number: 15832149 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Escherichia coli O157:H7 # 1 451 1 451 451 805 99.0 0 MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIGIGFVGIGLVIGLMLDS IGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPIAILVNVAMLLTRMTRVVN VDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKLGDWFARDTRNFFELEGIAIP HGTSAYLGPIAVLVDAIIEKIPGVNRIKFSADDIQRKFGPFGEPVTVGFVMGLITGILAG YDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKQARSRLQAKFGGQEFLIGLDPALL LGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGDLATIGFFVAMAVAVHRGNLFRTLISG VIIMSITLWIATQTIGLHTQLAANAGALKAGGMVASMDQGGSPITWLLIQVFSPQNIPGF IIIGAIYLTGIFMTWRRARGFIKQEKAVLAE >gi|296918664|gb|GG773036.1| GENE 217 249725 - 250765 727 346 aa, chain + ## HITS:1 COG:ECs2894 KEGG:ns NR:ns ## COG: ECs2894 COG1063 # Protein_GI_number: 15832148 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 346 1 346 346 704 98.0 0 MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHE FSGYIDAVGSGVDDLHPGDVVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGLAEY IVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCA VALGAKSVTAIDISSEKLALAKSFGAMQTFNSLEMSAPQMQGVLRELRFNQLILETAGVP QTVELAVEIAGPHAQLALVGTLHQDLHLTSTTFGKILRKELTVIGSWMNYSSPWPGQEWE TASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP >gi|296918664|gb|GG773036.1| GENE 218 250925 - 251698 568 257 aa, chain + ## HITS:1 COG:gatR KEGG:ns NR:ns ## COG: gatR COG1349 # Protein_GI_number: 16132228 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 257 3 259 259 454 99.0 1e-128 MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAK NITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADG IDAVNGITTFNEGYSVSGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVS EVDKLALQKTRVKLITV >gi|296918664|gb|GG773036.1| GENE 219 251780 - 252679 651 299 aa, chain - ## HITS:1 COG:ECs2892 KEGG:ns NR:ns ## COG: ECs2892 COG1597 # Protein_GI_number: 15832146 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 594 99.0 1e-170 MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKLGVAT VIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGN AIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGGVSYIIHGLMRMDTLQPDRC EIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEIIPTLVSTLK SDEDNPNIIEGASSWFDIQAPHEITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR >gi|296918664|gb|GG773036.1| GENE 220 253137 - 253412 175 91 aa, chain + ## HITS:1 COG:no KEGG:APECO1_4457 NR:ns ## KEGG: APECO1_4457 # Name: yegR # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 91 35 125 125 182 100.0 3e-45 MSGCAVHNDETSIGKFGLAYKSNIQRKLDNQYYTEAEASLARGRISGAENIVKNDAVHFC VTQGKKMQIVDLKTEGAGLHGVARLTFKCGE >gi|296918664|gb|GG773036.1| GENE 221 253912 - 255273 1539 453 aa, chain - ## HITS:1 COG:ECs2889 KEGG:ns NR:ns ## COG: ECs2889 COG0826 # Protein_GI_number: 15832143 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 927 99.0 0 MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGK KFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPEMPIHLSVQAN AVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDMEIEIFVHGALCMAYSGRCLLS GYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKYEPIPVQNVEPTLGIGAPTDKVF MIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTKMGVHSLKIEGRTKSFYYCAR TAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGYTEGFLRRHTHDDYQNYEYGYSVSDRQ QFVGEFTGERKGELAAVAVKNKFSVGDSLELMTPQGNINFTLEHMENAKGEAMPVAPGDG YTVWLPVPQDLELNYALLMRNFSGETTRNPHGK >gi|296918664|gb|GG773036.1| GENE 222 255923 - 256975 242 350 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2183 NR:ns ## KEGG: ECS88_2183 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 350 55 404 404 678 100.0 0 MVQQINSLAEYSLFNKNDDVIPEWLVSKFNTASVSTATLYYIETDHQQILTKERELVEFL SRKCGTRLESKLQRITCYVAFRMREEEHEKMLQRREKGWQPSEQNTVKSILDVPDGKIVE FDASHSNLRREMAYESWHMQHCVGQFDDRKNLTGGYGEYYANQIEQHKLRLFSLRDNNNI PHVTIALNVVGDSLEIDQIKGKQNRHPVKKYADDVLSLLQLLSPQAVRHSDCEGMGIVYE NTPEYQGWKYVTEVYETSFLLSVLHNNFHLLEHFTNPSVELQWLLLHSAPDKLHYLNAID PIVATSAEMLFPGAEWHPQFAGQNISNISFEIESLTLQTSHYLPLSEVEK >gi|296918664|gb|GG773036.1| GENE 223 256975 - 257691 414 238 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2182 NR:ns ## KEGG: ECS88_2182 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 238 1 238 238 468 100.0 1e-130 MSLIIVLLVAIFIFIYRYKKNKPQIDAFIAKEKEKDLIKDKRRATKRRKWALAIGDIVAR RNGLSVNGFTLDLKLTDDKRQQLALQVKQELGTETYQSNEDFRQQIGVILQRWATGLGNS PHDFYEQLAAQGQVLDGLAFDCMRTAFLTRCIAGLGWCDENQAWIVLLLNAQRAQDCFAS WEDYASAYVRARQKWLMIYDTPVATANRDLKEVTAWLKDPSSNWKKLPWNEFKIFEPN >gi|296918664|gb|GG773036.1| GENE 224 257702 - 259810 521 702 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2181 NR:ns ## KEGG: ECS88_2181 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 702 14 715 715 1425 100.0 0 MEQDARLLSAMQKMCDQKMPLNTLERKWQIANIPYMLQEKRYQELDEIYNQVLQESFTSR QAEKRYFLSWTQMCNYFYDMNTLVDAGTEGLRLIKTWQQARPHSTHAWLAEAQYWNHRAW LYRSYGWANDTTHAMWLCAGACNEQMVIATLKAIDCDPRQWMAALLTSTNSKVFGQPAWL AAHLNGDSVAGIPLMIALKNYHRRSPQEVEALMAYSGLSFEHAICPVLPRPNILPEYDDD GGQKYWLSVCLTIFPHTFYPFVEYIPFRMPRWGGSHKEISELLDSVTCKHLSTEEHDYMD LLLWWDDYRDVSIEDIAPEEQQYAIDLAENIAQYAQFQECRHNALEWLLACYNKQNDHDK LWCCIQRAVMEDMKLNNYYTAYAIKFALSYYPDSFWIYNFICQNSQNTTYATPVIYRGFF QREGILGFEKDEGQGDAWLEKASDIKYNHNWRSAIKDLSWFDLSDYFIPLATIGKQRNIP AALNLVALEYLDKEDNTKLPYEPSTALEYFRRALKILQDDLNFHSSVSYPLVKNYGYSEH QQDLQNIYFSIAICYQALNKQEISKETRAIYEKNLLDNLFLAHEAGHEKAWGLFLLNIFE VKELSLAHLHLQQVQEEANKGTLEAMITLSRLYGNKEDEKLFNMKLSARWTHFAESLYPD NEIIADCLYHLHFSSLWKRCRYAWYTFRIPASELPGQVNSMV >gi|296918664|gb|GG773036.1| GENE 225 259871 - 260476 410 201 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2180 NR:ns ## KEGG: ECS88_2180 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 201 4 204 204 427 100.0 1e-119 MLMLKKGMMLVGLIFFSLPANAGCTLEETARKVIMGFQQEDAQLINSLIDKKTGLYVLFH RGASMDVENLKQINFRQPVPEYFPWPSAGEHVPRDDEFNKKAIPKFNCERGWNKQGYFIS NSDVHHKVSRSLVFTQMFGSPQNTISDAQIAAARRMEYGAVRVVAAPEESNDGLVFYLSQ LYSYDSDWYLTVVDQIGDCGA >gi|296918664|gb|GG773036.1| GENE 226 260601 - 260933 365 110 aa, chain - ## HITS:1 COG:yegP KEGG:ns NR:ns ## COG: yegP COG3422 # Protein_GI_number: 16130020 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 110 14 123 123 169 98.0 8e-43 MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIASVRSNSPQEERYEKKT ASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKVNGTSQTVKDNT >gi|296918664|gb|GG773036.1| GENE 227 261113 - 261835 792 240 aa, chain - ## HITS:1 COG:baeR KEGG:ns NR:ns ## COG: baeR COG0745 # Protein_GI_number: 16130019 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 240 1 240 240 464 100.0 1e-131 MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILL DLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVAR VKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLDLTPAEFRLLKTLSHEPGKVF SREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWEADACRIV >gi|296918664|gb|GG773036.1| GENE 228 261832 - 263235 1177 467 aa, chain - ## HITS:1 COG:ECs2886 KEGG:ns NR:ns ## COG: ECs2886 COG0642 # Protein_GI_number: 15832140 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 467 1 467 467 897 96.0 0 MKFWRPGITGKLFLAIFATCIVLLITMHWAVRISFERGFIDYIKHGNEQRLQMLGDALGE QYAQHGNWRFLRNNDRFVFQILRSLEHDNNEDKPGPGMPPHGWRTQFWVVDQNNKVLVGP RAPVPPDGTRRPIMVNGAEVGAVIASPVERLTRNTDINFDRQQRQTSWLIVALSTLLAAL ATFPLARGLLAPVKRLVDGTHKLAAGDFTTRVAPTSEDELGRLAEDFNQLASTLEKNQQM RRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPETLASLQAEVGTLTKLVDDLHQLSM SDEGALAYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFSLPDSITVFGDRDRLMQLFNN LLENSLRYTDSGGSLKISAEQHDKTVRLTFADSAPGVSDDQLQKLFERFYRTEGSRNRAS GGSGLGLAICLNIVEAHNGRIIAAHSPFGGLSITVELPLERDLQREV >gi|296918664|gb|GG773036.1| GENE 229 263232 - 264647 1422 471 aa, chain - ## HITS:1 COG:ECs2885 KEGG:ns NR:ns ## COG: ECs2885 COG0477 # Protein_GI_number: 15832139 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 471 1 471 471 745 98.0 0 MTDLPDSTRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAV MLPASGWLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGR LTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIA TLMLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSKGTGFSPLAIAGLVAVGVVALVL YLLHAQNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAG LMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLSLVTLLFMTTALLGWYYVLPFVL FLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGSQH VSVDSGTTQTVFMYTWLSMAFIIALPAFVFARVPSDTHQNVAISRRKRSAQ >gi|296918664|gb|GG773036.1| GENE 230 264648 - 267725 3106 1025 aa, chain - ## HITS:1 COG:yegO KEGG:ns NR:ns ## COG: yegO COG0841 # Protein_GI_number: 16130016 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1025 1 1025 1025 1849 98.0 0 MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMA SSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLP SGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAPTISQIDGVGDVDVGGS SLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQGALEDGTHRWQIQTNDELKTAAE YQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSI RVRLPELQSTIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATI IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP LQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLT LTPMMCGWMLKASKPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALN IWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTG GSRVNSGMMFITLKPRGERSETAQQIIDRLRKKLAKEPGANLFLMAVQDIRVGGRQANAS YQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQEDNGAEMNLIYDRDTMARLGIDV QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSY FAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAG TAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALQLFNA PFSLIALIGIMLLIGIVKKNAIMMVYFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLA ALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPK QAVTE >gi|296918664|gb|GG773036.1| GENE 231 267726 - 270848 3449 1040 aa, chain - ## HITS:1 COG:yegN KEGG:ns NR:ns ## COG: yegN COG0841 # Protein_GI_number: 16130015 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1040 1 1040 1040 1809 99.0 0 MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLY PGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITLQFQLTLPLDVAEQEVQAA INAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPMTQVEDMVETRVAQKISQISG VGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPSRAVTLSA NDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKEQAIVMNVQRQPGA NIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYL FLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENIS RYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAI LISAVVSLTLTPMMCARMLSQESLRKQNRFSRASEKMFDRIIAAYGRGLAKVLNHPWLTL SVALSTLLLSVLLWVFIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDP AVQSLTSFVGVDGTNPSLNSARLQINLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQP TQDLTIDTQVSRTQYQFTLQATSLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYV NVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTI RLTSSDGGVVPLSSIAKIEQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEK TLNLPVDITTQFQGSTLAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPT AGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPREAIYQA CLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYL LFDRLALWTKSRFARHEEEA >gi|296918664|gb|GG773036.1| GENE 232 270848 - 272095 1417 415 aa, chain - ## HITS:1 COG:ECs2882 KEGG:ns NR:ns ## COG: ECs2882 COG0845 # Protein_GI_number: 15832136 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 415 50 464 464 717 98.0 0 MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQQSPAGGRRGMRAGPLA PVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDP SQFKVALAQAQGQLAKDKATLANARRDLSRYQQLAKTNLVSRQELDAQQALVSETEGTIK ADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTL PESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQD DALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQ KVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSTTTPEEKATSREYAKKGARS >gi|296918664|gb|GG773036.1| GENE 233 272593 - 272721 65 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMSSFIMTLSLFKAPSSGGAFPFQRPAEIFGLPPFALYAVYR >gi|296918664|gb|GG773036.1| GENE 234 272976 - 273635 548 219 aa, chain + ## HITS:1 COG:ECs2881 KEGG:ns NR:ns ## COG: ECs2881 COG4245 # Protein_GI_number: 15832135 # Func_class: R General function prediction only # Function: Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 399 97.0 1e-111 MSEQITFATSDFASNPEPRCPCILLLDVSGSMSGRPINELNTGLVTFRDELLADSLALKR VELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITKALDMVEERKREYRANGIS YYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFTIGVQGADMKTLAQISVRQPLSL QGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTSV >gi|296918664|gb|GG773036.1| GENE 235 273713 - 274393 524 226 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2171 NR:ns ## KEGG: ECS88_2171 # Name: yegK # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 226 28 253 253 436 100.0 1e-121 MQVAWLNDQQPLLSVFVADGAGSVSQGGEGAMLAVNEAMAYMSQKMQGGELGLNDVLATD IVLTIRQRLFAEAEAKELAVRDFACTFLGLISSANGTLIMQIGDGGVVVDLGHGLQLPLT PMVGEYTNMTHFITDEDAVSRLETFTSTERAHKVAAFTDGIQRLALNMLDNSPHVPFFTP FFNGLASATQEQLDLLPELLKQFLSSPAVNERTDDDKTLALALWLP >gi|296918664|gb|GG773036.1| GENE 236 274390 - 276330 937 646 aa, chain + ## HITS:1 COG:Z3239 KEGG:ns NR:ns ## COG: Z3239 COG4248 # Protein_GI_number: 15802551 # Func_class: R General function prediction only # Function: Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains # Organism: Escherichia coli O157:H7 EDL933 # 1 646 1 646 646 1266 96.0 0 MKPTLYTATGECVTPGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPALKQDKLAFMAATA DAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLY VARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINANGTLHLCEVGVSH FTPPELQTMPSFVGFERTENHDNFGFALLIFHILFGGRHPYSGVPLISDAGNALETDIAH FRYAYASDNQRRGLKPPPRSIPLSMLPGDVEAMFQQAFTESGVATGRPTAKAWVAALDLL RQQLKKCTVSAMHVYPAHLTDCPWCALDNQGVIYFIDLGEEVITTGGDFVLARVWAMVMA SVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILIEIALSALSLLFCGLQAEPSYIILIP VLAAIWIIGSLTSKAYKAEIQQRREAFNRAKMDYDHLVSQIQQLGGLEGFIAKRARLEKM KDEILGLPEEEKRDLAALQDTARERQKQKFLEGFFIDVASIPGVGPARKAALRSFGIETA ADVTRRSVKQVKGFGDHLTQAVIDWKASCERRFVFRPNEAVTPADRQAVMAKMTAKRHRL ESALTVGATELQRFRLHAPARTMPLMEPLRQAAEKLAQAKADLSRC >gi|296918664|gb|GG773036.1| GENE 237 276343 - 277695 1450 450 aa, chain - ## HITS:1 COG:yegD KEGG:ns NR:ns ## COG: yegD COG0443 # Protein_GI_number: 16130009 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli K12 # 1 450 22 471 471 884 98.0 0 MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADD DETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKP QQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINFQGLGSDEANTQAQGILERAA KRAGFKDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREA SLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDF YSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEESKIALSSVAETRASLPF ISDELATLISQQGLESALNQPLARILEQVQLALDNAQEKPDVIYLTGGSARSPLIKKALA EQLPGIPIAGGDDFGSVTAGLARWAEVVFR >gi|296918664|gb|GG773036.1| GENE 238 277708 - 277860 87 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|323977771|gb|EGB72857.1| ## NR: gi|323977771|gb|EGB72857.1| 3MG2 DNA-3-methyladenine glycosylase 2 [Escherichia coli TW10509] # 1 50 1 50 50 89 98.0 7e-17 MPVKKGRDFSEMLPSRQPEYESKAQRLNNVYAESGLTRRCDVYPELAAAV >gi|296918664|gb|GG773036.1| GENE 239 277829 - 278677 726 282 aa, chain + ## HITS:1 COG:alkA KEGG:ns NR:ns ## COG: alkA COG0122 # Protein_GI_number: 16130008 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Escherichia coli K12 # 1 282 1 282 282 541 97.0 1e-154 MYTLNWQPPYDWSWMLGFLAARAVSSVETGADSYYACSLAVGEYRGVVTAIPDIARHTLH INLSAGLEPVAAECLAKMSCLFDLQCNPQIVNGALGKLGAARPGLRLPGSVDAFEQGVRA ILGQLVSVAMAAKLTARVAQLYGERLDDFPDYVCFPTPQRLAAADPQALKALGMPLKRAE ALIHLANAALEGTLPMTIPGDVEQAMKKLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA >gi|296918664|gb|GG773036.1| GENE 240 278788 - 282105 2732 1105 aa, chain - ## HITS:1 COG:Z3235m_2 KEGG:ns NR:ns ## COG: Z3235m_2 COG2202 # Protein_GI_number: 15804978 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Escherichia coli O157:H7 EDL933 # 301 670 1 370 370 773 99.0 0 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN LADWLRLALGSAIVPPLLGGVLVILLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES ETRFRNAMEYSAIGMALVGTEGQWLQSNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV TVYEPQQAAAHSERAAISLDEQRRMIKENQLMMIAHGVASPRIPQARNLWLISLKLWSCE GEIIDEQTFRRSFSDPALSHALDRRVFHDFFQQAAKAIASKGLSIALPLSVAGLSSATLV NELIEQLENSPLPPRLLHLIIPADAILDHAASVQKLRLAGCRIVFSQVGRDLQIFNSLKA NMADYLLLDGELCASVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD LIYGDVIVDAQPLDLLVNSSYFAIN >gi|296918664|gb|GG773036.1| GENE 241 282423 - 283064 613 213 aa, chain + ## HITS:1 COG:ECs2873 KEGG:ns NR:ns ## COG: ECs2873 COG0572 # Protein_GI_number: 15832127 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Escherichia coli O157:H7 # 1 213 19 231 231 418 100.0 1e-117 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE RVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGI LLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFI EPSKQYADIIVPRGGKNRIAIDILKAKISQFFE >gi|296918664|gb|GG773036.1| GENE 242 283156 - 283779 729 207 aa, chain + ## HITS:1 COG:ECs2872 KEGG:ns NR:ns ## COG: ECs2872 COG0717 # Protein_GI_number: 15832126 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Escherichia coli O157:H7 # 1 207 1 193 193 374 93.0 1e-104 MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDE VSAALDRVMSDEIVLDESEAFYLHPGELALAVTLESVTLPADLVGCPPPSVTLPADLVGW LDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPLSGP AARPYNRREDAKYRNQQGAVASRIDKD >gi|296918664|gb|GG773036.1| GENE 243 283801 - 285654 1326 617 aa, chain + ## HITS:1 COG:asmA KEGG:ns NR:ns ## COG: asmA COG2982 # Protein_GI_number: 16130004 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli K12 # 1 617 1 617 617 1170 99.0 0 MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQ LSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAV RSEDAPVAPRDNTLPDLSDDRGWSFDISSLKMADSVLVFQHEDDEQVTIRNIRLQMEQDP QHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIQGQ GSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLK ETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQGLHGFTADILLQASNVRWRGMNFTDV ATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRINFQPRLENVEIGTILKAFNY PISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGD VKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALTGEGMLNLADQTCDTQFDI RVIGGWNGESKLIDFLKETPVPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAER NKDSRNGKDVKKLLEKM >gi|296918664|gb|GG773036.1| GENE 244 285707 - 285997 264 96 aa, chain - ## HITS:1 COG:ECs2870 KEGG:ns NR:ns ## COG: ECs2870 COG5606 # Protein_GI_number: 15832124 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 172 98.0 2e-43 MKIETFDSVWDAVSDTPEQAENMRIRAELVTIINNWIEQQGFSQAQAASALGVTQPRISE LARGKIQIFSIDKLITMMAHAGLHIQRIEIQYPHAA >gi|296918664|gb|GG773036.1| GENE 245 285987 - 286325 299 112 aa, chain - ## HITS:1 COG:ECs2869 KEGG:ns NR:ns ## COG: ECs2869 COG4679 # Protein_GI_number: 15832123 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 207 98.0 5e-54 MRKKLAFLDTSLDDLRAFPESSRQEIGYQLDRIQQGLNPYDWKPFSTIGPGVREIRTRDA DGIYRVMYIAKFEEAVYVLHCFQKKTQTTSQSDIDLDKRRYKELVQERKNEN >gi|296918664|gb|GG773036.1| GENE 246 286400 - 287983 1824 527 aa, chain - ## HITS:1 COG:yegH_2 KEGG:ns NR:ns ## COG: yegH_2 COG1253 # Protein_GI_number: 16130003 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli K12 # 232 527 1 296 296 574 99.0 1e-163 MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRDRARVTGLLLAMLMRLL LLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKATMELNERLEGKDSNNPTQR KGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAAVVIAISLMLMASKPLTQFVN SHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAIGFSVMIEALNQLAIFNRRRFLS ANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVDHGNQQIFNPQERRMIERVLNLNQR TVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQS LRGEPLNLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTET IAGNLPNEVEEIDARHDIQKNADSSWTANGHMPLEDLVQYVPLPLDEKREYHTIAGLLME YLQRIPKPGEEVQVGDYLLKTLQVESHRVQKVQIIPLRKDGEMEYEV >gi|296918664|gb|GG773036.1| GENE 247 288726 - 289781 980 351 aa, chain + ## HITS:1 COG:ECs2867 KEGG:ns NR:ns ## COG: ECs2867 COG1596 # Protein_GI_number: 15832121 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Escherichia coli O157:H7 # 1 351 29 379 379 696 100.0 0 MSTMGKDVIKQQDADFDLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVG PGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDI TGRLATYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTA DWRNVVLTHNGREERISLQALMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQST LKMDFSGMTLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSL VMATEFRLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW >gi|296918664|gb|GG773036.1| GENE 248 289787 - 290230 442 147 aa, chain + ## HITS:1 COG:ECs2866 KEGG:ns NR:ns ## COG: ECs2866 COG0394 # Protein_GI_number: 15832120 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 295 99.0 3e-80 MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSL EGHCARQISRRLCRNYDLILTMENRHIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKS RETFAAVYTLLERSARQWAQALNAEQV >gi|296918664|gb|GG773036.1| GENE 249 290233 - 292395 2629 720 aa, chain + ## HITS:1 COG:wzc_1 KEGG:ns NR:ns ## COG: wzc_1 COG3206 # Protein_GI_number: 16130000 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Escherichia coli K12 # 1 480 13 492 492 916 99.0 0 MTEKVKQHAAPVTGSDEIDIGRLVGTVIEARWWVIGITAVFALCAVVYTFFATPIYSADA LVQIEQNSGNSLVQDIGSALANKPPASDAEIQLIRSRLVLGKTVDDLDLDIAVSKNTFPI FGAGWDRLMGRQNETVKVTTFNRPKEMADQVFTLNVLDDKNYTLSSDGGFSARGQAGQML KKEGVTLMVEAIHARPGSEFTVTKYSTLGMINQLQNSLTVTENGKDAGVLSLTYTGEDRE QIRDILNSIARNYQEQNIERKSAEASKSLAFLAQQLPEVRSRLDVAENKLNAFRQDKDSV DLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLYTKVHPAYRTLLEKRQALEDEKAKLNG RVTAMPKTQQEIVRLTRDVESGQQVYMQLLNKEQELKITEASTVGDVRIVDPAITQPGVL KPKKGLIILGAIILGLMLSIVGVLLRSLFNRGIESPQVLEEHGISVYASIPLSEWQKARD SVKTIKGVKRYKQSQLLAVGNPTDLAIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGK TFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSEILIGQGDITTAAKPTS IAKFDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVG TTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIFRRASAYQDYGYYEYEYKSDAK >gi|296918664|gb|GG773036.1| GENE 250 292524 - 293363 707 279 aa, chain + ## HITS:1 COG:ECs2864 KEGG:ns NR:ns ## COG: ECs2864 COG0463 # Protein_GI_number: 15832118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 # 1 279 1 279 279 570 99.0 1e-163 MKDNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDP RITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLY ANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQVFTWAWRFKECLFDTELKAAQ DYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHKDKFDRASK KYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLAEGIRGR >gi|296918664|gb|GG773036.1| GENE 251 293366 - 293854 549 162 aa, chain + ## HITS:1 COG:ECs2863 KEGG:ns NR:ns ## COG: ECs2863 COG1045 # Protein_GI_number: 15832117 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 314 98.0 4e-86 MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPLLVLYRIITEGFFGYEI QAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRGADNMACPHIGNGVELGAN VIILGDITIGNNVTVGAGSVVLDSVPDNALVVGEKARVKVIK >gi|296918664|gb|GG773036.1| GENE 252 293851 - 295068 1206 405 aa, chain + ## HITS:1 COG:ECs2862 KEGG:ns NR:ns ## COG: ECs2862 COG0438 # Protein_GI_number: 15832116 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 405 1 405 405 854 99.0 0 MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP QMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKV KNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGK RQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQG KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKL MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEDVLQ LVQLSKPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL >gi|296918664|gb|GG773036.1| GENE 253 295043 - 296260 895 405 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_2392 NR:ns ## KEGG: ECUMN_2392 # Name: wcaD # Def: putative colanic acid biosynthesis protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 405 1 405 405 646 100.0 0 MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLMIALG IGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYL VVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFF ALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGVMTFILFYLLEWAFQYLNKEAIK KKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLTHIDGVV RFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVFLSLWYMGKVIKMMINAFGD NRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFILRKALNITR >gi|296918664|gb|GG773036.1| GENE 254 296271 - 297017 648 248 aa, chain + ## HITS:1 COG:ECs2860 KEGG:ns NR:ns ## COG: ECs2860 COG0463 # Protein_GI_number: 15832114 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 489 97.0 1e-138 MLLSIITVAFRNLAGIVKTHASLAHLAQADDISFEWIVVDGGSNDGTCEYLENLKGIYNL RFVSEPDNGIYDAMNKGIAMAQGKFALFLNSGDIFHQDAANFVRKLKVQKDNVMITGDAL LDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKWRYDLEYKVSSDYALAAKMYK AGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSK TKALYNKS >gi|296918664|gb|GG773036.1| GENE 255 297033 - 297581 300 182 aa, chain + ## HITS:1 COG:wcaF KEGG:ns NR:ns ## COG: wcaF COG0110 # Protein_GI_number: 16129994 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 1 182 1 182 182 363 100.0 1e-101 MQDLSGFSVPKGFRGGNAIKVQLWWAVQATIFAWSPQVLYRWRAFLLRLFGAKIGKNVVI RPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQKSYLCTGSHDHASQHFTI NATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANVVCRGNPAVVIRERVE TE >gi|296918664|gb|GG773036.1| GENE 256 297608 - 298729 1359 373 aa, chain + ## HITS:1 COG:ECs2858 KEGG:ns NR:ns ## COG: ECs2858 COG1089 # Protein_GI_number: 15832112 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: GDP-D-mannose dehydratase # Organism: Escherichia coli O157:H7 # 1 373 1 373 373 767 100.0 0 MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYAC NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM LQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKP GDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLL KSHGYDVAIALES >gi|296918664|gb|GG773036.1| GENE 257 298732 - 299697 989 321 aa, chain + ## HITS:1 COG:wcaG KEGG:ns NR:ns ## COG: wcaG COG0451 # Protein_GI_number: 16129992 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 321 1 321 321 669 99.0 0 MRKQRIFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVY LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMA ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHV IPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPML SHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEIS LEAGLASTYQWFLENQDRFRG >gi|296918664|gb|GG773036.1| GENE 258 299700 - 300200 396 166 aa, chain + ## HITS:1 COG:ECs2856 KEGG:ns NR:ns ## COG: ECs2856 COG0494 # Protein_GI_number: 15832110 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 166 2 160 160 306 92.0 1e-83 MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAPPPNRPAQGYWFVPGGRVQ KDEMLEAAFERLTMAELGLRLPITVGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVAE EDLLLPDEQHDDYRWLTPDALLASDNVHANSRAYFLAEKRAGVPGL >gi|296918664|gb|GG773036.1| GENE 259 300197 - 301420 1239 407 aa, chain + ## HITS:1 COG:ECs2855 KEGG:ns NR:ns ## COG: ECs2855 COG0438 # Protein_GI_number: 15832109 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 407 1 407 407 803 99.0 0 MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYYPQWQVGENYSAWRYKR EEGAATVWRCPLYVPKQPSTLKRLLHLGSFAASSFFPLMAQRRWKPDRIIGVVPTLFCTP GMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVAQLATAFERSGLHNVDNVSTI SRSMMNKAIEKGVAAENVIFFPNWSEIARFQHVADVDVDALRNQLGLPDNKKIILYSGNI GEKQGLENVIEAAERLRDEPLIFAIVGQGGGKARLEKMAQQRGLRNMQFFPLQSYDALPA LLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGNAVITAEAHTELGQLCETFPGIAVCVE PESVEALVAGIRQALLLPKHNTVAREYAERTLDKENVLRQFINDIRG >gi|296918664|gb|GG773036.1| GENE 260 301423 - 302859 1618 478 aa, chain + ## HITS:1 COG:cpsB_1 KEGG:ns NR:ns ## COG: cpsB_1 COG0836 # Protein_GI_number: 16129989 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Mannose-1-phosphate guanylyltransferase # Organism: Escherichia coli K12 # 1 341 1 341 341 676 99.0 0 MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTTICRLNGVECESPVVIC NEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAAKRHSPENDPLMLVLAADH VIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGYIRRGEVSAGEQDMVAFEVAQ FVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELKKYRPDILDACEKAMSAVDPDLD FIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAGWSDVGSWSSLWEISAHTAEGNVCH GDVINHKTENSYVYAESGLVTTVGVKDLVVVQTKDAVLIADRNAVQDVKKVVEQIKADGR HEHRVHREVYRPWGKYDSIDAGDRYQVKRITVKPGEGLSVQMHHHRAEHWVVVAGTAKVT IDGDIKLLGENESIYIPLGATHCLENPGKIPLDLIEVRSGSYLEEDDVVRFADRYGRV >gi|296918664|gb|GG773036.1| GENE 261 303052 - 304422 1586 456 aa, chain + ## HITS:1 COG:ECs2853 KEGG:ns NR:ns ## COG: ECs2853 COG1109 # Protein_GI_number: 15832107 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 939 98.0 0 MKRLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAK GLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGD TGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLFGYINVKNLTPLKLVINSGNG AAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADM GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAA GGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGK TLGELVRDRMAAFPASGEINSKLAHPVEAINRVEQHFSREALAVDRTDGISMTFANWRFN LRSSNTEPVVRLNVESRGDVPLMEARTRTLLTLLNE >gi|296918664|gb|GG773036.1| GENE 262 304558 - 305952 1371 464 aa, chain + ## HITS:1 COG:wcaJ KEGG:ns NR:ns ## COG: wcaJ COG2148 # Protein_GI_number: 16129987 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Escherichia coli K12 # 1 464 1 464 464 959 99.0 0 MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQ MLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYGLTS IGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDP KPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPDV FTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLCCIALAV KLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKVGNFLRRTS LDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQINGWRGE TDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY >gi|296918664|gb|GG773036.1| GENE 263 305954 - 307432 1829 492 aa, chain + ## HITS:1 COG:ECs2851 KEGG:ns NR:ns ## COG: ECs2851 COG2244 # Protein_GI_number: 15832105 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli O157:H7 # 1 492 1 492 492 845 99.0 0 MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLLTVSLVIIALADTLSDF GIANSIIQRKEISHLELTTLYWLNVGLGLVVCVVVFLLSDLIGDVLNNPDLAPLIKTLSL AFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTFTVVSAHFWPLAMTAILGYLVNS AVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTADSIINYLNTNLSTLVLARILGA GVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPA LLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCVVGLLRSVGNPIGSLLMAKARVDISFKFN VFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQIINTILSYFVMIKPVLGSSYRQYILSLWL PFYLSLPTLGVSYALGIVLKGQLALGMLLAVQIAAGVLAFVVMIVLSRHPLVVEVKRQFC RSEKMKMLLRAG >gi|296918664|gb|GG773036.1| GENE 264 307504 - 308784 1380 426 aa, chain + ## HITS:1 COG:wcaK KEGG:ns NR:ns ## COG: wcaK COG2327 # Protein_GI_number: 16129985 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 426 1 426 426 859 98.0 0 MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLF LQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDA IIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDAL ILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAIT LRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLR QHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAG IMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLNEAVNRERQAGMQMVQSVLE RIGEAK >gi|296918664|gb|GG773036.1| GENE 265 308781 - 310001 1024 406 aa, chain + ## HITS:1 COG:wcaL KEGG:ns NR:ns ## COG: wcaL COG0438 # Protein_GI_number: 16129984 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli K12 # 1 406 1 406 406 789 98.0 0 MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAARTRW LQDEPQGKVAKLRHRASQTLRGIHRKNTWQALNLKRYGAESRNLILSAICGQVVTPLHAD VFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSRDVLNHYTPEYQQLFRRGDLMLP ISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVA IEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAILDDAD VFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDARAL AQRLAAFSQLDTDELAPVIKRAREKVEHDFNQQVINRELASLLQAL >gi|296918664|gb|GG773036.1| GENE 266 310012 - 311406 740 464 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_2335 NR:ns ## KEGG: EcE24377A_2335 # Name: wcaM # Def: putative colanic acid biosynthesis protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 462 1 462 464 868 93.0 0 MPFKKLSRRTFLTASSALAFLHTPFARALPARTSVNINDYNPHDWIASFKQAFSEGQTVV VPAGLVCDNINTGIFIPAGKTLHILGSLRGNGRGRFVLQDGSQVTGEVGGSMHNITLDVR GSDCTIKGLAMSGFGPVTQIYIGGKNKRVMRNLTIDNLTISHANYAILRQGFHNQIIGAN VTNCKFSDLQGDAIEWNVAINDSDILISDHVIERINCTNGKINWGIGIGLAGSTYDNNYP EDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIKAHNITPAFSKKAGIDNATVAIYGC DNFVIDNIEMTNSAGMLIGYGVIKDKYLSIPQNFRLNNIHLDNSNIAWKLRGIQISAGNA VSFVALTNIEMTRASLELHNKPQHIFMRNIKVMQESTAGPALTMNFDLRKDVRGVFMAKN ETLLSLVNVHAVNEKGQSSVDIDRINHHVVNVENINFKLPERGR >gi|296918664|gb|GG773036.1| GENE 267 311581 - 312474 882 297 aa, chain + ## HITS:1 COG:ECs2846 KEGG:ns NR:ns ## COG: ECs2846 COG1210 # Protein_GI_number: 15832100 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 579 98.0 1e-165 MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASK NAVENHFDTSYELESLLELRVKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPA IGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTK DPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTD AIAELAKKQAVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE >gi|296918664|gb|GG773036.1| GENE 268 312847 - 313932 707 361 aa, chain + ## HITS:1 COG:rfbB KEGG:ns NR:ns ## COG: rfbB COG1088 # Protein_GI_number: 16129981 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Escherichia coli K12 # 1 361 1 361 361 703 95.0 0 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEVSDSERYSFEHADIC DAEAMARIFSQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDD EKKKNFRFHHISTDEVYGDLPHPDEVNNNEALPLFTETTAYAPSSPYSASKASSDHLVRA WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNWVENVKSGAYQSWIEQNYEGR Q >gi|296918664|gb|GG773036.1| GENE 269 313932 - 314831 488 299 aa, chain + ## HITS:1 COG:rfbD KEGG:ns NR:ns ## COG: rfbD COG1091 # Protein_GI_number: 16129980 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Escherichia coli K12 # 1 299 1 299 299 572 95.0 1e-163 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTNYCGDFSNPEGVAETVKKIRPDVIVN AAAHTAVDKAESEPDFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGSGDAPWLETD ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN DQFGAPTGAELLADCTAHAIRVALKKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGIN LALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNELFTTTAI >gi|296918664|gb|GG773036.1| GENE 270 314890 - 315765 753 291 aa, chain + ## HITS:1 COG:rfbA KEGG:ns NR:ns ## COG: rfbA COG1209 # Protein_GI_number: 16129979 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Escherichia coli K12 # 1 291 1 291 293 567 94.0 1e-161 MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQD TPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEDFIGGDDCALVLGDNIFYGHDLP KLMEAAVNKESGATVFAYHVNDPERYGVVEFDNNGTAISLEEKPLEPKSNYAVTGLYFYD NDVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMMGRGYAWLDTGTHQSLIEASNFI ATIEERQGLKVSCPEEIAYRKGFIDAEQVKVLAEPLIKNQYGQYLLKMISE >gi|296918664|gb|GG773036.1| GENE 271 315783 - 316193 234 136 aa, chain + ## HITS:1 COG:no KEGG:PC1_1300 NR:ns ## KEGG: PC1_1300 # Name: not_defined # Def: WxcM domain protein domain protein # Organism: P.carotovorum # Pathway: not_defined # 1 127 1 127 131 176 62.0 2e-43 MDIKLISLQKHGDERGALIALEEQRNIPFEVKRIYYILETLNGVRRGFHAHKVTRQLAIV VKGACKFHLDNGKETKQVELNDPTIALLIEPYIWHEMYDFSDDCVLLVIADDFYKESDYI RNYDDFIRRVNSIENS >gi|296918664|gb|GG773036.1| GENE 272 316180 - 316647 167 155 aa, chain + ## HITS:1 COG:PAB0773 KEGG:ns NR:ns ## COG: PAB0773 COG0110 # Protein_GI_number: 14521366 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Pyrococcus abyssi # 10 151 17 158 205 154 55.0 7e-38 MRIHKLSDVQTTSIGDGTTIWQFVVILKGAVIGNNCNICANTLIENNVVIGNNVTVKSGV YIWDGVKIEDNVFIGPCVAFTNDKYPRSKVYPDEFLQTIIRKGASIGANATILPGIEIGE KAIVGAGSVVTKNVPPCAIVVGNPARFIKWVEDNE >gi|296918664|gb|GG773036.1| GENE 273 316640 - 317746 494 368 aa, chain + ## HITS:1 COG:all0498 KEGG:ns NR:ns ## COG: all0498 COG0399 # Protein_GI_number: 17227994 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Nostoc sp. PCC 7120 # 3 367 7 381 395 256 39.0 4e-68 MNKIDFLDLFAINQRQHKELVSAFSRVLDSGWYIMGEELEQFEKEFAEYCGVKYCIGVAN GLDALILVLRAWKELGYLEDGDEVLVPANTYIASILAITENKLVPVLVEPDIETYNINPA LIENYITEKTKAILPVHLYGLLCNMPEISAIARKYNLLILEDCAQAHGAIRDGRKAGAWG DAAGFSFYPGKNLGALGDAGAVTTNNAELSSTIKALRNYGSHKKYENIYQGLNSRLDELQ AALLRVKIHTLPEDTAIRQRIAEKYIREIKNPAITLPVYEGQGAHVWHLFVVRIANREKF QSYLLEKGIKTLIHYPLPPHKQQAYQNMSSLSLPITEQIHDEVISLPISPVMSEDDVNYV IKMVNDYK >gi|296918664|gb|GG773036.1| GENE 274 318280 - 319056 58 258 aa, chain + ## HITS:1 COG:wzxE KEGG:ns NR:ns ## COG: wzxE COG2244 # Protein_GI_number: 16131648 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 8 242 165 402 416 115 28.0 1e-25 MFMILLIVAYNLKGALIATAINSAIAGLVLVLFCLNKSWFRFKYWWGKTDKDKIIKIIHY TLMALVSVISMPTALMCIRKILIAKTGWEDAGQWQAVWKISEVYLGVVTIALSTYFLPRL TIIKTSFLIKKEVNSTILYIISITSFMALSIYLFRDLVITVLFTEQFRSARELFLLQLIG DVIKIAGFLYAYPLQSQGHTKLFISSEVIFSMLFIITTYIFVVNYGVHGANISYVITYSL YFVFAFVFTNFINVRRNN >gi|296918664|gb|GG773036.1| GENE 275 319829 - 320122 240 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315285629|gb|EFU45071.1| ## NR: gi|315285629|gb|EFU45071.1| hypothetical protein HMPREF9539_04415 [Escherichia coli MS 110-3] # 1 97 253 349 349 199 100.0 4e-50 MIAVGLIEDGAFHYPCAESMACGCLVISNYAPLTETNSVLKLVKFDACKLGEAINLCLNL DLEEKSKEIQSNISVLNKYDWKIVGETFNSLLLDANK >gi|296918664|gb|GG773036.1| GENE 276 320143 - 320700 170 185 aa, chain + ## HITS:1 COG:STM2094 KEGG:ns NR:ns ## COG: STM2094 COG1898 # Protein_GI_number: 16765424 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 183 2 183 183 244 63.0 9e-65 MNIVKTDIPDLIVLEPKVFSDERGFFMESYNQIEFEKAIGRHVNFVQDNHSKSSKGVLRG LHYQLAPYAQAKLVRCVVGQVFDVAVDLRKNSPTFKKWFGITLSAENKRQLWIPEGFAHG FLVTSDEAEFIYKTTNYYAPGHQQAIIYNDPILNIDWPFCSSALSLSQKDQEAKLFSELL DSELF >gi|296918664|gb|GG773036.1| GENE 277 321724 - 322611 43 295 aa, chain + ## HITS:1 COG:RSc0687 KEGG:ns NR:ns ## COG: RSc0687 COG1216 # Protein_GI_number: 17545406 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Ralstonia solanacearum # 8 280 6 278 309 91 28.0 1e-18 MCKAKVLAIIVTYNPEIIRLTECINSLAPQVERIILVDNGSNNSDLIKNISINNLEIILL SENKGIAFAQNHGVKKGLEAKEFDYLFFSDQDTCFPSDVIEKLKSTFTKNNKKGKNVACA SPFFKDHRSNYMHPSVSLNIFTSTKVICSEVDDDLYPSHVIASGMLMSREAWRVVGPFCE KLFIDWVDTEWCWRALANNMIIVQTPSVIISHELGYGQKIFAGRSVTIHNSFRNFYKIRN AIYLMLHSNYSFKYRYHAFFHATKNVVFEILYSKEKLNSLKVCFKAVRDGMFNNF >gi|296918664|gb|GG773036.1| GENE 278 323272 - 323718 275 148 aa, chain + ## HITS:1 COG:PH0432 KEGG:ns NR:ns ## COG: PH0432 COG0438 # Protein_GI_number: 14590347 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pyrococcus horikoshii # 8 148 243 386 393 94 36.0 1e-19 MILNAFINTDKKIKFMGNWDNSEYGRQLKKYYSNYPNITLLEPNYNIEELYKLRKNCLAY IHGHSAGGTNPSLVEAMHFNIPIFAFDCDFNRYTTNNLAHYFNDSEQLSLLAESLSFGNL KCRVLDLKNYAEDMYNWRHIAAMYESIY >gi|296918664|gb|GG773036.1| GENE 279 323897 - 324451 336 184 aa, chain + ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 184 1 184 378 370 97.0 1e-103 MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQ YGDFDNGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKS RRKGAIHVISAFSTMHSLVIGQIRTDEKSNEITAIPELLNMLDIKGKIITTDAMGCQKDI AEKI >gi|296918664|gb|GG773036.1| GENE 280 325321 - 325788 -118 155 aa, chain + ## HITS:1 COG:ECs0731 KEGG:ns NR:ns ## COG: ECs0731 COG5433 # Protein_GI_number: 15829985 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli O157:H7 # 3 155 25 177 357 239 77.0 1e-63 MGNIEDFGETHLVFLKQYGDFEHGIPAHDTIARVVSCISPAKFHECFINWMRDCYSSYDK DVIAIDGKTLRHSYDKSRRKGAIHVISAFSTMHSLVIGQIKADEKFNEVTAIPELLNIWI LKEKLSQLMRWVARKILQRKKKNGGGDYLFAVKVN >gi|296918664|gb|GG773036.1| GENE 281 326628 - 328025 222 465 aa, chain + ## HITS:1 COG:HI1246 KEGG:ns NR:ns ## COG: HI1246 COG1368 # Protein_GI_number: 16273165 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Haemophilus influenzae # 113 408 279 558 647 69 23.0 1e-11 MPLALSNAAEIESLGIGEVIKVFFVFILFIIISFITLPSGALTERIKYYKFNLLCIVLLL VCSFISAGPVYAFYETAKLFYLQQTFKPSKKIGDAGKFFLKTSVFINPIENNYSFKGRNV IVIFAEGFSSEIMGNAKPRAFSVTPNLDKLSTEALSFKNYYNHTAATFRGLRGQLTSGYQ FRDGLTDAGTGIAQLSKAEINNIYLHRQTSLPDILKEYGYKSYFIASTEKNSPLNTMLKT LNFDKVLGMGDFIGYQRDRMTDKQTFNALQYFLRSQENKKGPFFIGVYPSGTHHGQDSPN EKYFDGNNPLYNKFYNYDFQLGKFIDFFRRSSFYNNTLLIITSDHSTFPSTEYKKAFNSD SRYFVGEIPFLVIGGDITPEILDADGKNSLSFAPTILHMLGIQYSMNYFLGCSLIDKECT SPFSHLSAIGSDYFVTSKENHVELIPNNNDSELIKLAESFYNISG >gi|296918664|gb|GG773036.1| GENE 282 328161 - 329567 1830 468 aa, chain + ## HITS:1 COG:gnd KEGG:ns NR:ns ## COG: gnd COG0362 # Protein_GI_number: 16129970 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Escherichia coli K12 # 1 468 1 468 468 921 99.0 0 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEF VESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF NFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGH YVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQTFTEWNNGELSSYLIDITKDIFT KKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAAS KVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIF RAGCIIRAQFLQKITDAYAENPKIANLLLAPYFKKIADDYQQALRDVVAYAVQNGIPVPT FSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEWLD >gi|296918664|gb|GG773036.1| GENE 283 329856 - 331022 818 388 aa, chain + ## HITS:1 COG:ugd KEGG:ns NR:ns ## COG: ugd COG1004 # Protein_GI_number: 16129969 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli K12 # 1 388 1 388 388 725 94.0 0 MKITISGTGYVGLSNGLLISQNHNVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIR FNATLDKKEAYRNADYVIIATPTDYDPKTNYFNTSSVESVIKDVTEINPCAVMIIKSTVP VGFTAAMHKKFKTENIIFSPEFLREGKALYDNLHPSRIVIGERSERAQRFAALLQEGAIK QNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNIISAIVEANRTRKDFIADAILLRKPKVVG IYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVIIYEPVMKEEMFFNSRLERDLATFKQQA DVIISNRMSEELKDAADKVYTRDLFGSD >gi|296918664|gb|GG773036.1| GENE 284 331167 - 332147 1017 326 aa, chain + ## HITS:1 COG:wzzB KEGG:ns NR:ns ## COG: wzzB COG3765 # Protein_GI_number: 16129968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli K12 # 1 326 13 338 338 536 92.0 1e-152 MKVENNNISGHNNDPEQIDLIDLLMQLWRGKVTIFITVIVAIALAIGYLVVAKEKWTSTA IITQPDVGQIAGYNNAMNVIYGQAAPKVADLQEALIGRFSSAFSALAETLDNQEEREKLT IEPAVKNQPLPLAVSYVGHTAADAQQKLAQYIQQVDDRVNEELEKDLKDNIALGMKNLQD SLKTQEVVAQEQKTLRIRQIQEALQYANQAQVTKPQIQQTGENITQDTLLLLGSEALESM IKHEATRPLVFSPNYYQTRQNLLDIESLKVDDLDIHAYRYVMKPTLPIRRDSPKKAITLI LAVLLGGMVGAGIVLGRNALRNYNAK >gi|296918664|gb|GG773036.1| GENE 285 332330 - 332941 733 203 aa, chain - ## HITS:1 COG:ZhisI_1 KEGG:ns NR:ns ## COG: ZhisI_1 COG0139 # Protein_GI_number: 15802505 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Escherichia coli O157:H7 EDL933 # 1 112 1 112 112 235 98.0 5e-62 MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTIESGKVTFFSRTKQR LWTKGETSGNFLNVVSIAADCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQ LLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVNDRFELTNEASDLMYHL LVLLQDQDLDLTTVIENLRKRHQ >gi|296918664|gb|GG773036.1| GENE 286 332935 - 333711 855 258 aa, chain - ## HITS:1 COG:ECs2826 KEGG:ns NR:ns ## COG: ECs2826 COG0107 # Protein_GI_number: 15832080 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 515 99.0 1e-146 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF GVQCIVVGIDTWYDAETGKYHVNQYTGDESCTRVTQWETLDWVQEVQKRGAGEIVLNMMN QDGVRNGYDLKQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN IGELKAYLATQGVEIRIC >gi|296918664|gb|GG773036.1| GENE 287 333693 - 334430 787 245 aa, chain - ## HITS:1 COG:ECs2825 KEGG:ns NR:ns ## COG: ECs2825 COG0106 # Protein_GI_number: 15832079 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Escherichia coli O157:H7 # 1 245 2 246 246 462 98.0 1e-130 MIIPALDLIDGTVVRLHQGDYGKQRDYGNNPLPRLQDYAAQGAEVLHLVDLTGAKDPAKR QIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFG ADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLA GSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALLEGKFTVKEAIA CWQNA >gi|296918664|gb|GG773036.1| GENE 288 334430 - 335020 668 196 aa, chain - ## HITS:1 COG:hisH KEGG:ns NR:ns ## COG: hisH COG0118 # Protein_GI_number: 16129964 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Escherichia coli K12 # 1 196 1 196 196 417 100.0 1e-117 MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRER ELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR VYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYGEPFTAAVQKDNFYGVQFHPE RSGAAGAKLLKNFLEM >gi|296918664|gb|GG773036.1| GENE 289 335020 - 336087 1245 355 aa, chain - ## HITS:1 COG:hisB_2 KEGG:ns NR:ns ## COG: hisB_2 COG0131 # Protein_GI_number: 16129963 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Escherichia coli K12 # 149 355 1 207 207 429 99.0 1e-120 MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLRLQKAGYKLVMITNQDGLG TQSFPQADFEGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAM DRANSYVIGDRATDIQLAENMGINGLRYDREALNWPMIGEQLTKRDRYAHVVRNTKETQI DVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEH FFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL >gi|296918664|gb|GG773036.1| GENE 290 336087 - 337157 1094 356 aa, chain - ## HITS:1 COG:hisC KEGG:ns NR:ns ## COG: hisC COG0079 # Protein_GI_number: 16129962 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Escherichia coli K12 # 1 356 1 356 356 702 98.0 0 MSTVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQQTLNRYPECQP KVVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEQGKDAILYCPPTYGMYSVSAETI GVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI VVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVI APYPLSTPVADIAAQALSPQGIVAMRERVAQIITEREYLIAALKEIPCVEQVFDSETNYI LARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQCVIDALRAEQV >gi|296918664|gb|GG773036.1| GENE 291 337154 - 338458 1183 434 aa, chain - ## HITS:1 COG:hisD KEGG:ns NR:ns ## COG: hisD COG0141 # Protein_GI_number: 16129961 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Escherichia coli K12 # 1 434 1 434 434 780 98.0 0 MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKTRGDEALREYSAKFDK TTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQV TRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLCSPPPIADEILYAAQLCGVRD VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQASQRLDGAAIDMPAGPSEVL VIADSGATPDFVASDLLSQAEHGPDSQVILLTPDADMARRVAEAVERQLAELPRAETARQ ALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRNARELVDGITSAGSVFLGDWSPESAGD YASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKEGFSTLASTIETLAAAERLTAHK NAVTLRVNALKEQA >gi|296918664|gb|GG773036.1| GENE 292 338464 - 339363 1109 299 aa, chain - ## HITS:1 COG:hisG KEGG:ns NR:ns ## COG: hisG COG0040 # Protein_GI_number: 16129960 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 299 1 299 299 574 100.0 1e-164 MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPG LVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPL SLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEAN GLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQGVIQARESKYIMMHAPTERLDE VIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME >gi|296918664|gb|GG773036.1| GENE 293 339874 - 340125 294 83 aa, chain + ## HITS:1 COG:yefM KEGG:ns NR:ns ## COG: yefM COG2161 # Protein_GI_number: 16129958 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Antitoxin of toxin-antitoxin stability system # Organism: Escherichia coli K12 # 1 83 10 92 92 140 100.0 8e-34 MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPAN ARRLMDSIDSLKSGKGTEKDIIE >gi|296918664|gb|GG773036.1| GENE 294 340122 - 340376 96 84 aa, chain + ## HITS:1 COG:AGc3658 KEGG:ns NR:ns ## COG: AGc3658 COG4115 # Protein_GI_number: 15889305 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 84 1 88 89 105 55.0 1e-23 MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGKPEPLKHNLSGFWSRRI IEEHRLVYAVTDDSLLIAACRYHY >gi|296918664|gb|GG773036.1| GENE 295 340459 - 341283 765 274 aa, chain + ## HITS:1 COG:ECs2818 KEGG:ns NR:ns ## COG: ECs2818 COG0451 # Protein_GI_number: 15832072 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 274 1 274 274 528 100.0 1e-150 MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDS DDLDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQ GTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLAGLVGPGRHPGRFFAGKTAPD GEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMARLLGLEPPQFRN SLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE >gi|296918664|gb|GG773036.1| GENE 296 341329 - 342258 870 309 aa, chain + ## HITS:1 COG:ECs2817 KEGG:ns NR:ns ## COG: ECs2817 COG0583 # Protein_GI_number: 15832071 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 309 8 316 316 614 99.0 1e-176 MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFT RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHS VTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLA QEEEPLNRRIIKQYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAIAGVYA KSDDGKSAI >gi|296918664|gb|GG773036.1| GENE 297 342525 - 343883 1563 452 aa, chain + ## HITS:1 COG:ECs2816 KEGG:ns NR:ns ## COG: ECs2816 COG0531 # Protein_GI_number: 15832070 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 452 3 454 454 816 99.0 0 MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVSGLTDGHVPTAYAFALI AILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSSLLDYLFAPMINILLAKIY FEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIVVLQIVLIAVILGMVVYGVFE GEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFDGISNLSEETKDAERVIPRAIFL TALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEIMLYVAGKAFQVGALIFSTITVLAS GMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWRTPAMNIILVGAIALLAINFDLVMATA LINFGALVAFTFVNLSVISQFWIREKRNKTLKDHFQYLFLPMCGALTVGALWVNLEESSM VLGLIWAAIGLIYLACVTKSFRNPVPQYEDVA >gi|296918664|gb|GG773036.1| GENE 298 343957 - 345384 1160 475 aa, chain - ## HITS:1 COG:sbcB KEGG:ns NR:ns ## COG: sbcB COG2925 # Protein_GI_number: 16129952 # Func_class: L Replication, recombination and repair # Function: Exonuclease I # Organism: Escherichia coli K12 # 1 475 1 475 475 974 99.0 0 MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQ PGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNVFYRNF YDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNA HDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWR GNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNAAVPVKL VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFAEAEPFTPS ENVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLD YAEQQRWLEHRRQVFTPEFLQGYADELQMLAQQYADDKEKVALLKALWQYAEEIV >gi|296918664|gb|GG773036.1| GENE 299 345716 - 346759 873 347 aa, chain + ## HITS:1 COG:ZdacD KEGG:ns NR:ns ## COG: ZdacD COG1686 # Protein_GI_number: 15802489 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 EDL933 # 1 346 44 389 390 712 100.0 0 MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN FTTVQILHRGKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP ISAHQRVGEIELYDRDKQVAHWPLVTLESVGEGSMFSRLSDYFHHKD >gi|296918664|gb|GG773036.1| GENE 300 346878 - 347351 402 157 aa, chain + ## HITS:1 COG:ECs2811 KEGG:ns NR:ns ## COG: ECs2811 COG3449 # Protein_GI_number: 15832065 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 318 99.0 2e-87 MNYEIKQEDKRTVAGFHLVGPWEQTVKKGFEQLMMWIDSKNIVPKEWVAVYYDNPDETPA EKLRCDTVVTVPNNFTLPENSEGVILTEISGGQYAVAVARVVGDDFAKPWYQFFNSLLQD SAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPKHH >gi|296918664|gb|GG773036.1| GENE 301 347549 - 348607 925 352 aa, chain + ## HITS:1 COG:yeeA KEGG:ns NR:ns ## COG: yeeA COG1289 # Protein_GI_number: 16129949 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 352 1 352 352 689 99.0 0 MRADKSLSPFEIRVYRHYRIVHGTRVALAFLLTFLIIRLFTIPESTWPLVTMVVIMGPIS FWGNVVPRAFERIGGTVLGSILGLIALQLELISLPLMLVWCAAAMFLCGWLALGKKPYQG LLIGVTLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFTGIWPQRAFIHWRIQLAKSLTE YNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQTINRN LVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPVFANTEK LNDAVEELRQLLDNHHDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK >gi|296918664|gb|GG773036.1| GENE 302 348779 - 349108 513 109 aa, chain + ## HITS:1 COG:ECs2809 KEGG:ns NR:ns ## COG: ECs2809 COG2926 # Protein_GI_number: 15832063 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 23 131 131 177 100.0 4e-45 METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEA IQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGEMKNGEAK >gi|296918664|gb|GG773036.1| GENE 303 350006 - 350197 305 63 aa, chain - ## HITS:1 COG:no KEGG:ECP_2049 NR:ns ## KEGG: ECP_2049 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 63 2 64 64 111 100.0 8e-24 MTLEADSVNVQALDMGHIVVDIDGVNITELINKAAENGYSLRVVDGRDSTETPATYASPH QLL >gi|296918664|gb|GG773036.1| GENE 304 350197 - 350571 282 124 aa, chain - ## HITS:1 COG:no KEGG:JW1987 NR:ns ## KEGG: JW1987 # Name: yeeV # Def: toxin of the YeeV-YeeU toxin-antitoxin system # Organism: E.coli_J # Pathway: not_defined # 1 124 1 124 124 251 100.0 8e-66 MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC DAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKY PEAK >gi|296918664|gb|GG773036.1| GENE 305 350660 - 350908 235 82 aa, chain - ## HITS:1 COG:no KEGG:ECP_2047 NR:ns ## KEGG: ECP_2047 # Name: not_defined # Def: YagB/YeeU/YfjZ family; region: YagB_YeeU_YfjZ; pfam06154 # Organism: E.coli_536 # Pathway: not_defined # 1 82 41 122 122 164 98.0 7e-40 MHYLADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSGELSPRYQHTVTLYAKGLTCE ADTLGSCGYVYLAVYPTPEMKN >gi|296918664|gb|GG773036.1| GENE 306 351102 - 351323 323 73 aa, chain - ## HITS:1 COG:no KEGG:EC55989_2261 NR:ns ## KEGG: EC55989_2261 # Name: yeeT # Def: conserved hypothetical protein; CP4-44 prophage # Organism: E.coli_55989 # Pathway: not_defined # 1 73 1 73 73 150 100.0 2e-35 MKIITRGEAMRIHQQHPTSRLFPFCTGKYRWHGSAEAYTGREVQDIPGVLAVFAERRKDS FGPYVRLMSVTLN Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:40:48 2011 Seq name: gi|296918663|gb|GG773037.1| Escherichia coli MS 110-3 genomic scaffold Scfld609, whole genome shotgun sequence Length of sequence - 2025 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 484 - 900 229 ## COG1846 Transcriptional regulators - Prom 1061 - 1120 3.5 2 2 Tu 1 . - CDS 1202 - 1396 68 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|296918663|gb|GG773037.1| GENE 1 484 - 900 229 138 aa, chain - ## HITS:1 COG:STM2813 KEGG:ns NR:ns ## COG: STM2813 COG1846 # Protein_GI_number: 16766124 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 2 133 31 162 176 92 38.0 2e-19 MQLCIRTNKRMQDNISEFLGAYGINHSAYMVLTTLFAAENHCLSPSEISQKLQFTRTNIT RITDFLEKAGYVKRTDSREDRRAKKISLTSEGMFFIQRLTLAQSMYLKEIWDYLTHDEQE LFEVINKKLLAHFSDASS >gi|296918663|gb|GG773037.1| GENE 2 1202 - 1396 68 64 aa, chain - ## HITS:1 COG:PA1938 KEGG:ns NR:ns ## COG: PA1938 COG2801 # Protein_GI_number: 15597134 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Pseudomonas aeruginosa # 1 56 210 265 273 65 55.0 3e-11 MERVFRSLKNEWLPKGGYGDFIHAVRDINQWINGYYNVYRPHTNNDGLPPCLHEEKWKQV IPVS Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:40:48 2011 Seq name: gi|296918662|gb|GG773038.1| Escherichia coli MS 110-3 genomic scaffold Scfld624, whole genome shotgun sequence Length of sequence - 1233 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 499 - 690 160 ## KPN_pKPN6p09258 RNA one modulator-like protein 2 1 Op 2 . + CDS 690 - 1091 247 ## KPN_pKPN6p09259 Excl1 protein Predicted protein(s) >gi|296918662|gb|GG773038.1| GENE 1 499 - 690 160 63 aa, chain + ## HITS:1 COG:no KEGG:KPN_pKPN6p09258 NR:ns ## KEGG: KPN_pKPN6p09258 # Name: rom # Def: RNA one modulator-like protein # Organism: K.pneumoniae # Pathway: not_defined # 1 63 1 63 63 72 96.0 5e-12 MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDVEADLCETLHDDAEHLFRTLSSRLDALQ DGN >gi|296918662|gb|GG773038.1| GENE 2 690 - 1091 247 133 aa, chain + ## HITS:1 COG:no KEGG:KPN_pKPN6p09259 NR:ns ## KEGG: KPN_pKPN6p09259 # Name: excl1 # Def: Excl1 protein # Organism: K.pneumoniae # Pathway: not_defined # 1 133 1 133 133 231 99.0 6e-60 MARVSISEAARLTGKSRTTLHRLIKAGDLSTCSGERNAKMVDTSELLRVFGPFEQPKGEH HSGQVSEQRDTASADQSEQVTRHLKQEIEHLNTLLLSKDSHIDSLKQAMLLLENHQAKLT ESPAPWWKFWKKS Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:40:55 2011 Seq name: gi|296918661|gb|GG773039.1| Escherichia coli MS 110-3 genomic scaffold Scfld627, whole genome shotgun sequence Length of sequence - 9253 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 3, operones - 1 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 597 338 ## COG0477 Permeases of the major facilitator superfamily - Prom 803 - 862 21.9 - Term 802 - 842 -0.0 2 2 Tu 1 . - CDS 958 - 1113 88 ## - Prom 1138 - 1197 2.7 + Prom 771 - 830 22.9 3 3 Op 1 5/0.000 + CDS 1066 - 2466 1303 ## COG4264 Siderophore synthetase component 4 3 Op 2 5/0.000 + CDS 2467 - 3414 251 ## PROTEIN SUPPORTED gi|229250525|ref|ZP_04374554.1| acetyltransferase, ribosomal protein N-acetylase 5 3 Op 3 3/0.000 + CDS 3414 - 5156 1356 ## COG4264 Siderophore synthetase component 6 3 Op 4 1/0.000 + CDS 5153 - 6430 797 ## COG3486 Lysine/ornithine N-monooxygenase + Term 6475 - 6501 1.0 7 3 Op 5 . + CDS 6552 - 8750 2060 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 8826 - 8892 20.3 Predicted protein(s) >gi|296918661|gb|GG773039.1| GENE 1 3 - 597 338 198 aa, chain - ## HITS:1 COG:YPO0988 KEGG:ns NR:ns ## COG: YPO0988 COG0477 # Protein_GI_number: 16121292 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 16 197 20 201 407 182 65.0 5e-46 MSSKIEDTPQKTLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTNLSLSVWAALLMLGSML FLPSSPWWGKQISLTGSKTVVLWALGGYGVSFTLLGLGSVLMATGAVTTAVGLGILIIAR IVYGLTVSAMVPACQVWALQRAGEGNRMAALATISSGLSCGRLFGPLCAAAMLVIHPLAP VWMLMAAPVWAVVMLLRL >gi|296918661|gb|GG773039.1| GENE 2 958 - 1113 88 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGINCLLRMGVAFQHALVESFAEGNWQKKLMPELINNKPGESGKVDRITA >gi|296918661|gb|GG773039.1| GENE 3 1066 - 2466 1303 466 aa, chain + ## HITS:1 COG:all0394 KEGG:ns NR:ns ## COG: all0394 COG4264 # Protein_GI_number: 17227890 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Nostoc sp. PCC 7120 # 27 461 166 605 606 197 31.0 4e-50 MLESYAHTQQTIDARHDWAILREKALNFGEAEQALLTGHAFHPAPKSHEPFNRQEAERYL PDMAPHFPLRWFSVDKTQIAGESLHLNLQQRLTRFAAENAPQLLNELSDNQWLFPLHPWQ GEYLLQQVWCQALFAKGLIRDLGEAGTSWLPTTSSRSLYCATSRDMIKFSLSVRLTNSVR TLSVKEVERGMRLARLAQTDGWQMLQARFPTFRVMQEDGWAGLRDLNGNIMQESLFSLRE NLLLEQPQSQTNVLVSLTQAAPDGGDSLLVSAVKRLSDRLGITVQQAAHAWVDAYCQQVL KPLFTAEADYGLVLLAHQQNILVQMLGDLPVGFIYRDCQGSAFMPHATEWLDTIDEAQAE NIFTREQLLRYFPYYLLVNSTFAVTAALGAAGLDSEANLMARVRTLLAEVRDQVTHKTCL NYVLESPYWNVKGNFFCYLNDHNENTIVDPSVIYFDFANPLQAQEV >gi|296918661|gb|GG773039.1| GENE 4 2467 - 3414 251 315 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229250525|ref|ZP_04374554.1| acetyltransferase, ribosomal protein N-acetylase [Catenulispora acidiphila DSM 44928] # 150 306 29 184 194 101 33 2e-21 MSGANIVHSGYGLRCEKLDKPLNLGWGLDNSAVLHWPGELPTGWLCDALDQIFIAAPQLS AVVLPWSEWCEEPQALTLFGQVQSDIIHRSAFWQLPLWLSSPANRASGEMVFDAEREIYF PQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRWMNDPRVEYFWEQSGSLEVQI AYLERQLTSKHAFPLIGCFDDRPFSYFEIYWAAEDRIGRHYSWQPFDRGLHLLVGEQQWR GAHYVQSWLRGVTHYLLLNEPRTQRTVLEPRIDNQRLFRHLEPAGYRTIKEFDFPHKRSR MVMADRHHFFTEVGL >gi|296918661|gb|GG773039.1| GENE 5 3414 - 5156 1356 580 aa, chain + ## HITS:1 COG:YPO0992 KEGG:ns NR:ns ## COG: YPO0992 COG4264 # Protein_GI_number: 16121294 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Yersinia pestis # 2 577 5 579 582 781 66.0 0 MNHKDWDLVNRRLVAKMLSELEYEQVFHAESQGDDRYCINLPGAQWRFIAERGIWGWLWI DAQTLRCADEPVLAQTLLMQLKQVLSMSDATVAEHMQDLYATLLGDLQLLKARRGLSASD LINLNADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEYANTFRLHWLAVKREHMIWRC DNEMDIHQLLTAAMDPQEFARFSQVWQENGLDHNWLPLPVHPWQWQQKIATDFIADFAEG RMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYNTSCYRGIPGRYIAAGPLASR WLQQVFATDATLVQSGAVILGEPAAGYVSHEGYAALARAPYRYQEMLGVIWRENPCRWLK PDESPVLMATLMECDENNQPLAGAYIDRSGLDAETWLTQLFRVVVVPLYHLLCRYGVALI AHGQNITLAMKEGVPQRVLLKDFQGDMRLVKEEFPEMDSLPQEVRDVTSRLSADYLIHDL QTGHFVTVLRFISPLMVRLGVPERRFYQLLAAVLSDYMKKHPQMSERFALFSLFRPQIIR VVLNPVKLTWPDLDGGSRMLPNYLEDLQNPLWLVTQEYES >gi|296918661|gb|GG773039.1| GENE 6 5153 - 6430 797 425 aa, chain + ## HITS:1 COG:YPO0993 KEGG:ns NR:ns ## COG: YPO0993 COG3486 # Protein_GI_number: 16121295 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Lysine/ornithine N-monooxygenase # Organism: Yersinia pestis # 1 423 1 423 442 554 59.0 1e-157 MKKSVDFIGVGTGPFNLSIAALSHQIEELDCLFFDEHPHFSWHPGMLVPDCHMQTVFLKD LVSAVAPTNPYSFVNYLVKHKKFYRFLTSRLRTVSREEFSDYLRWAAEDMNNLYFSHTVE NIDFDKKRRLFLVQTSQGEYFARNICLGTGKQPYLPPCVKHMTQSCFHASEMNLRRPDLS GKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRNNFNALDEAAFADEYFTPEYISG FSGLEEDIRHQLLDEQKMTSDGITADSLLTIYRELYHRFEVLRKPRNIRLLPSRSVTTLE SSGPGWKLLMEHHLDQGRESLESDVVIFATGYRSALPQILPSLMPLITMHDKNTFKVRDD FTLEWSGPKENNIFVVNASMQTHGIAEPQLSLMAWRSARILNRVMGRDLFDLSMPPALIQ WRSGT >gi|296918661|gb|GG773039.1| GENE 7 6552 - 8750 2060 732 aa, chain + ## HITS:1 COG:YPO0994 KEGG:ns NR:ns ## COG: YPO0994 COG1629 # Protein_GI_number: 16121296 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Yersinia pestis # 4 732 2 726 726 964 67.0 0 MISKKYTLWALNPLLLTMMAPAVAQQTDDETFVVSANRSNRTVAEMAQTTWVIENAELEQ QIQGGKELKDALAQLIPGLDVSSRSRTNYGMNVRGRPLVVLVDGVRLNSSRTDSRQLDSI DPFNIDHIEVISGATSLYGGGSTGGLINIVTKKGQPETMMEFEAGTKSGFSSSKDHDERI AGAVSGGNEHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQYSDRLDIMGTGTLNIDE SRQLQLITQYYKSQGDDDYGLNLGKGFSAIRGTSTPFVSNGLNSDRIPGTERHLISLQYS DSAFLGQELVGQVYYRDESLRFYPFPTVNANKQVTAFSSSQQDTDQYGMKLTLNSKPMDG WQITWGLDADHERFTSNQMFFDLAQASASGGLNNKKIYTTGRYPSYDITNLAAFLQSGYD INNLFTLNGGVRYQYTENKIDDFIGYAQQRQIAAGKATSADAIPGGSVDYDNFLFNAGLL MHITERQQAWLNFSQGVELPDPGKYYGRGIYGAAVNGHLPLTKSVNVSDSKLEGVKVDSY ELGWRFTGNNLRTQIAAYYSISDKSVVANKDLTISVVDDKRRIYGVEGAVDYLIPDTDWS TGVNFNVLKTESKVNGTWQKYDVKTASPSKATAYIGWAPDPWSLRVQSTTSFDVSDAQGY KVDGYTTADLLGSYQLPVGTLSFSIENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGR GRTFGLNYSVLF Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:41:06 2011 Seq name: gi|296918660|gb|GG773040.1| Escherichia coli MS 110-3 genomic scaffold Scfld634, whole genome shotgun sequence Length of sequence - 22039 bp Number of predicted genes - 22, with homology - 21 Number of transcription units - 16, operones - 5 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 9 - 269 124 ## EFER_2699 lipoprotein; DLP12 prophage + Prom 1059 - 1118 3.0 2 2 Tu 1 . + CDS 1144 - 1434 205 ## EC55989_4862 hypothetical protein 3 3 Tu 1 . + CDS 1619 - 2179 380 ## pECS88_0130 hypothetical protein 4 4 Tu 1 1/1.000 + CDS 3415 - 4530 892 ## COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase + Term 4627 - 4657 0.3 5 5 Op 1 35/0.000 + CDS 4670 - 4888 172 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Term 4912 - 4949 -0.9 + Prom 4890 - 4949 12.9 6 5 Op 2 1/1.000 + CDS 4977 - 8387 2534 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Prom 8411 - 8470 6.4 7 6 Op 1 1/1.000 + CDS 8491 - 9720 870 ## COG2382 Enterochelin esterase and related enzymes 8 6 Op 2 . + CDS 9805 - 10761 480 ## COG2819 Predicted hydrolase of the alpha/beta superfamily + Term 10997 - 11053 2.5 - Term 10751 - 10788 6.1 9 7 Tu 1 . - CDS 10806 - 12983 1499 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 13074 - 13133 8.8 - Term 13599 - 13654 1.3 10 8 Op 1 . - CDS 13715 - 13915 72 ## APECO1_O1CoBM135 hypothetical protein 11 8 Op 2 . - CDS 13836 - 14111 163 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 14135 - 14194 4.3 - Term 15217 - 15276 4.5 12 9 Op 1 . - CDS 15430 - 15738 93 ## APECO1_O1CoBM131 hypothetical protein 13 9 Op 2 . - CDS 15771 - 16223 297 ## pECS88_0110 putative acetyltransferase - Prom 16255 - 16314 6.5 + Prom 16388 - 16447 8.9 14 10 Tu 1 . + CDS 16516 - 16776 224 ## pECS88_0109 conserved hypothetical protein YdfA 15 11 Tu 1 . + CDS 16881 - 17363 329 ## pECS88_0108 conserved hypothetical protein YdeA 16 12 Tu 1 . - CDS 17383 - 17601 81 ## pECS88_0106 conserved hypothetical protein YbaA - Prom 17686 - 17745 5.2 + Prom 17648 - 17707 2.7 17 13 Tu 1 . + CDS 17795 - 18103 121 ## pECS88_0105 colicin-Ia immunity protein + Term 18259 - 18303 2.7 - Term 18073 - 18109 3.2 18 14 Tu 1 . - CDS 18125 - 20005 925 ## pECS88_0104 colicin-Ia - Prom 20072 - 20131 6.6 - Term 20035 - 20074 0.7 19 15 Tu 1 . - CDS 20191 - 20766 356 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 20 16 Op 1 . - CDS 21085 - 21345 353 ## COG3668 Plasmid stabilization system protein 21 16 Op 2 . - CDS 21363 - 21560 150 ## pECS88_0101 conserved hypothetical protein YacA, possible repressor 22 16 Op 3 . - CDS 21536 - 21631 70 ## - Prom 21656 - 21715 4.8 Predicted protein(s) >gi|296918660|gb|GG773040.1| GENE 1 9 - 269 124 86 aa, chain + ## HITS:1 COG:no KEGG:EFER_2699 NR:ns ## KEGG: EFER_2699 # Name: borD # Def: lipoprotein; DLP12 prophage # Organism: E.fergusonii # Pathway: not_defined # 1 86 28 113 113 163 100.0 2e-39 MLITGCAQQTFTVGNKPTAVTPKETITHHFFVSGIGQEKTVDAAKICGGAENVVKTETQQ TFVNGLLGFITFGIYTPLEARVYCSQ >gi|296918660|gb|GG773040.1| GENE 2 1144 - 1434 205 96 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4862 NR:ns ## KEGG: EC55989_4862 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 96 6 101 251 197 98.0 1e-49 MADIATMRMKALHFWDKHGISAASEAFGVSCRTLYWWRQLLIKGGPEGLIPHSKAPLVRR KKHWHPDVLKEIRRLRTELPNLGKEQIFVRLKPWCA >gi|296918660|gb|GG773040.1| GENE 3 1619 - 2179 380 186 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0130 NR:ns ## KEGG: pECS88_0130 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 186 26 211 211 388 100.0 1e-107 MDAIELRMGEMRRYIITMIDEHSDYVLALAVPSLNSDIVNHFFSRAARLFPVGISQIITD NGKEFLGSFDKTLQEAAIKHLWTYPYTPKMNAICERFNRALREQFIEFNEILLFEDLALF NLKLAEYLALYNSKRLHKALALTTPVEYILKENKNCNMWWTHTQQTHRPPRLGRYVGWLV QTSGYG >gi|296918660|gb|GG773040.1| GENE 4 3415 - 4530 892 371 aa, chain + ## HITS:1 COG:STM2773 KEGG:ns NR:ns ## COG: STM2773 COG1819 # Protein_GI_number: 16766085 # Func_class: G Carbohydrate transport and metabolism; C Energy production and conversion # Function: Glycosyl transferases, related to UDP-glucuronosyltransferase # Organism: Salmonella typhimurium LT2 # 1 371 1 371 371 662 86.0 0 MRILFVGPPLYGLLYPVLSLAQAFRVNGHEVLIASGGQFAQKAAEAGLVVFDAAPGLDSE AGYRHHEAQRKKSNIGTQMGNFSFFSEEMADHLVEFAGHWRPDLIIYPPLGVIGPLIAAK YDIPVVMQTVGFGHTPWHIKGVTRSLTDAYRRHNVGATPRDMAWIDVTPPSMSILENDGE PIIPMQYVPYNGGAVWEPWWERRPERKRLLVSLGTVKPMVDGLDLIAWVMDSASEVDAEI ILHISANARSDLRSLPSNVRLVDWIPMGVFLNGADGFIHHGGAGNTLTALHAGIPQIVFG QGADRPVNARVVAERGCGIIPGDVGLSSNMINAFLNNRSLRKASEEVAAEMAAQPCPGEV AKSLITMVQKG >gi|296918660|gb|GG773040.1| GENE 5 4670 - 4888 172 72 aa, chain + ## HITS:1 COG:STM2774 KEGG:ns NR:ns ## COG: STM2774 COG1132 # Protein_GI_number: 16766086 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Salmonella typhimurium LT2 # 1 60 1 60 1217 101 81.0 3e-22 MPANHTPTPAQSWIVRLARVCWERKKLSVIVVVASVSTILLAALTPLLTRQAVNDALAGN PAPPPRRGRLAS >gi|296918660|gb|GG773040.1| GENE 6 4977 - 8387 2534 1136 aa, chain + ## HITS:1 COG:STM2774 KEGG:ns NR:ns ## COG: STM2774 COG1132 # Protein_GI_number: 16766086 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Salmonella typhimurium LT2 # 1 1122 84 1208 1217 1707 79.0 0 MRRGYAGMLSLWVQHTLRGRVFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCP VPLAVFTYYIAGIAVMLWMSPAMTLIVVCVLVCLAITALRARRRVFAQTGLASDQLANLT EHIREVLAQISVVKSCVAEMRETHWLDRQSRQIVRVRIGAVISQAMPGATMLALPVLGQI VLLCYGGWSVMHGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDT RSQMEDGTESINSQVVGLELENMSFDYHHGDRHILSNISFSLRAGETVAVVGASGSGKST LLMLLARFYDPCSGKIWLNTSEGRQNLRDIRLEALRRRVGIVFEDAFLFAGTVAENIAYG HPQATADDIRRAAAAAGASDFINALPKGFDSLLTERGTNLSGGQRQRIALARALITAPDV LILDDTTSAVDAVTEAEINTALGRYADEGHMLLVIARRRSTLQLASRVVVLDKGRMVDTG TPAELEARCPAFRALMTGDSDFLATSHNSHNELWPAEPATQDDVTDTGDKGFVARMTRVP ENAVQQALAGKGRKVTSLLKPVAWMFVIAALLIALDSAAGVGVLILLQHGIDSGVAAGDM SIIGLCALLALCLVIVGWCSYSLQTVFAARAAESVQHSVRLRSFGHMLRLGLPWHEKHAD SRLTRMTVDVDSLARFLQNGLAGAATSLVTMFAIAATMFWLDPFLALTALSAVPVAALAT MIYRRLSTPAYAQARLEIGKVNSTLQEKVSGLRVVQSHGQQELEGARLHALSERFRATRV RAQKYLAVYFPFLTFCTEASYAAVLLVGASQVAAGEMTAGVLAAFFLLLGQFYGPVQQLS GIVDAWQQATASGKHIDELLATEGTENLGSSSVLPVTGALHLDEVTFSYPDSHEPALNKL TLTIPEGMVVAVVGRSGAGKSTLIKLIAGLYFPTHGNIRIGVQMLDDASLTEYRRQIGLV DQDVALFSSDIAENIRYSRPSATNEDVEIASQRAGLYEMVCNLPQGFRTPVNNGGADLPA GQRQLIALARAQLANAHILLLDEATSCLDRTSEERLMSSLTDVVHAGKHSALIVAHRLTT AQRCDLIAVIDKGLLAEYGTHEQLLSAGGLYTRLWHDSVSSTALHRQHNMKEETPG >gi|296918660|gb|GG773040.1| GENE 7 8491 - 9720 870 409 aa, chain + ## HITS:1 COG:STM2775 KEGG:ns NR:ns ## COG: STM2775 COG2382 # Protein_GI_number: 16766087 # Func_class: P Inorganic ion transport and metabolism # Function: Enterochelin esterase and related enzymes # Organism: Salmonella typhimurium LT2 # 14 407 18 412 414 547 69.0 1e-155 MLNMQQHLSAIASLRNQLAAGHIANLTDFWREAESLNVPLVTPVEGAEDEREVTFLWRAR HPLQGVYLRLNRVTDKEHVEKGMMSALPETDIWTLTLRLPASYCGSYSLLEIPPGTTAET IALSGGRFATLAGKADPLNKMPEINVRGNAKESVLTLDKAPALSEWNGGFHTGQLLTSMR IIAGKSRQVRLYIPDVDISQPLGLVVLPDGETWFDHLGVCAAIDAAINNGRIVPVAVLGI DNINEHERTEILGGRSKLIKDIAGHLLPMIRAEQPQRQWADRSRTVLAGQSLGGISALMG ARYAPETFGLVLSHSPSMWWTPERTSRPGLFSETDTSWVSEHLLSAPPQGVRISLCVGSL EGSTVPHVQQLHQRLITAGVESHCAIYTGGHDYAWWRGALIDGIGLLQG >gi|296918660|gb|GG773040.1| GENE 8 9805 - 10761 480 318 aa, chain + ## HITS:1 COG:STM2776 KEGG:ns NR:ns ## COG: STM2776 COG2819 # Protein_GI_number: 16766088 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Salmonella typhimurium LT2 # 1 314 1 311 311 393 61.0 1e-109 MYAREYRSTRPHKAIFFHLSCLTLICSAQVYAKPDMRPLGPNIADKGSVFYHFSVTSFDS VDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQ TNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDR QRRGLWGHSYGGLFVLDSWLSSSYFRSYYSASPSLGRGYDALLSRVTAVEPLQFCAKHLA IMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMFNASFRQALL DISGENANYTAGCHELSH >gi|296918660|gb|GG773040.1| GENE 9 10806 - 12983 1499 725 aa, chain - ## HITS:1 COG:STM2777 KEGG:ns NR:ns ## COG: STM2777 COG4771 # Protein_GI_number: 16766089 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 1 725 3 726 726 1164 82.0 0 MRINKILWSLTVLLVGLNSQISVAKSSDDDNDETLVVEATAEQVLKQQPGVSVITSEDIK KTPPVNDLSDIIRKMPGVNLTGNSASGTRGNNRQIDIRGMGPENTLILIDGVPVTSRNSV RYSWRGERDTRGDTNWVPPEQVERIEVIRGPAAARYGSGAAGGVVNIITKRPTNDWHGSL SLYTNQPESSDEGATRRANFSLSGPLAGNALTTRLYGNLNKTDADSWDINSPVGTKNAAG HEGVRNKDINGVVSWKLNPQQILDFEAGYSRQGNIYAGDTQNSSSSAVTESLAKSGKETN RLYRQNYGITHNGIWDWGQSRFGVYYEKTNNTRMNEGLSGGGEGRILAGEKFTTNRLSSW RTSGELNIPLNVMVDQTLTVGAEWNRDKLDDPSSTSLTVNDSDISGISGSAADRSSKNHS QISALYIEDNIEPVPGTNIIPGLRFDYLSDSGGNFSPSLNLSQELGDYFKVKAGVARTFK APNLYQSSEGYLLYSKGNGCPKDITSGGCYLIGNKDLDPEISVNKEIGLEFTWEDYHASV TYFRNDYQNKIVAGDNVIGQTASGAYILKWQNGGKALVDGIEASMSFPLVKDRLNWNTNA TWMITSEQKDTGNPLSVIPKYTINNSLNWTITQAFSASVNWTLYGRQKPRTHAETRSEDT GGLSGKELGAYSLVGTNFNYDINKNLRLNVGVSNILNKQIFRSSEGANTYNEPGRAYYAG VTASF >gi|296918660|gb|GG773040.1| GENE 10 13715 - 13915 72 66 aa, chain - ## HITS:1 COG:no KEGG:APECO1_O1CoBM135 NR:ns ## KEGG: APECO1_O1CoBM135 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 66 1 66 66 113 100.0 2e-24 MVSLLLMNAYHGNRQNNYYQLWQHSFNFNYCTYIAFKGGKMKLLSLRHSISVIREADILS LQFMII >gi|296918660|gb|GG773040.1| GENE 11 13836 - 14111 163 91 aa, chain - ## HITS:1 COG:YPO3286 KEGG:ns NR:ns ## COG: YPO3286 COG0722 # Protein_GI_number: 16123441 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Yersinia pestis # 1 91 254 347 356 81 43.0 4e-16 MHDEGINHRLIIDCSHGNSGKVAKRQISVARQVIDNRKKIPGYVAGIMVESFLQDGKQSD SFPLEYGQSVTDECISWQQTEQLLSTLAAQL >gi|296918660|gb|GG773040.1| GENE 12 15430 - 15738 93 102 aa, chain - ## HITS:1 COG:no KEGG:APECO1_O1CoBM131 NR:ns ## KEGG: APECO1_O1CoBM131 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 102 14 115 115 170 100.0 2e-41 MDSKKMWRSNYAPPLLRILWRLGIRLPPLPFMPFWQVTLLMGGLWGISWGCAMWFMYWGP SGMVAGEAIIISITSGFLFGLLMASFHWWRRKVNRLPPWNDV >gi|296918660|gb|GG773040.1| GENE 13 15771 - 16223 297 150 aa, chain - ## HITS:1 COG:no KEGG:pECS88_0110 NR:ns ## KEGG: pECS88_0110 # Name: not_defined # Def: putative acetyltransferase # Organism: E.coli_S88 # Pathway: not_defined # 1 150 1 150 150 296 100.0 2e-79 MKFMECAVRDVIYGTNVRIVKPVNIYECELRDNVFVGPFVEIQKGCVIGSGSRIQSHTFI CENVTLGENCFIGHNVTFANDLFRSGAPDPSPDNWISITLGDSVTVGSGAIILSPYICSG AVIGAGSVVVKPIENKGIYAGNPARLLRIL >gi|296918660|gb|GG773040.1| GENE 14 16516 - 16776 224 86 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0109 NR:ns ## KEGG: pECS88_0109 # Name: ydfA # Def: conserved hypothetical protein YdfA # Organism: E.coli_S88 # Pathway: not_defined # 1 86 1 86 86 167 100.0 1e-40 MDEERVFSLSYEQLTRFAEKRIRECNLDSQGVTYLCESAKAGAVLIFWHELAINGYASMN AIKRQEIIDADHQRLRKLIWPEDDWK >gi|296918660|gb|GG773040.1| GENE 15 16881 - 17363 329 160 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0108 NR:ns ## KEGG: pECS88_0108 # Name: ydeA # Def: conserved hypothetical protein YdeA # Organism: E.coli_S88 # Pathway: not_defined # 1 160 37 196 196 291 98.0 7e-78 MLERSGEAPVYGPNLRASCRRLEDAGWLRTLRAPNLQLAVELTDAGRAVAQPLLLAEQDR LRTEQRAAEVVVLPLVPAAGLPADGTSATDLAVQLNGITYQACRGDFVVHLDGSTCLQLW NKEGRVVRREGDPLEVAQWLQACHDAGMEVRVQINESAAP >gi|296918660|gb|GG773040.1| GENE 16 17383 - 17601 81 72 aa, chain - ## HITS:1 COG:no KEGG:pECS88_0106 NR:ns ## KEGG: pECS88_0106 # Name: ybaA # Def: conserved hypothetical protein YbaA # Organism: E.coli_S88 # Pathway: not_defined # 1 72 14 85 85 123 100.0 2e-27 MDSKKMWRSNYAPPLLCILWRLGIRLPPLPFMPFWQVTVLTGGLWGISWGCAMWFIYWGR RKVNRLPPWDDV >gi|296918660|gb|GG773040.1| GENE 17 17795 - 18103 121 102 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0105 NR:ns ## KEGG: pECS88_0105 # Name: imm # Def: colicin-Ia immunity protein # Organism: E.coli_S88 # Pathway: not_defined # 1 102 10 111 111 174 100.0 8e-43 MWWGWVTGGYMLYMSWDYDFKYRLLFWCISLCGMVLYPVAKWYIEDTALKFTRPDFWNSG FFADTPGKMGLLAVYTGTVFILSLPLSLIYILSVIIKRLSVR >gi|296918660|gb|GG773040.1| GENE 18 18125 - 20005 925 626 aa, chain - ## HITS:1 COG:no KEGG:pECS88_0104 NR:ns ## KEGG: pECS88_0104 # Name: cia # Def: colicin-Ia # Organism: E.coli_S88 # Pathway: not_defined # 1 626 1 626 626 1087 100.0 0 MSDPVRITNPGAESLGYDSDGHEIMAVDIYVNPPRVDVFHGTPPAWSSFGNKTIWGGNEW VDDSPTRSDIEKRDKEITAYKMTLSAQQKENENKRTEAAKRLSAAIAAREKDENTLKTLR AGNADAADITRQEFRLLQAELREYGFRTEIAGYDALRLHTESRMLFADADSLRISPREAR SLIEQAEKRQKDAQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLDAQQARLL GQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNTLDGKTIVSPEKFPGRS STNHSIVVSGDPRFAGTIKITTSAVIDNRANLNYLLTHSGLDYKRNILNDRNPVVTEDVE GDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLK EKENIRNQLAGINQKIAEEKRKQDELKATKDAINFTTEFLKSVSEKYGAKAEQLAREMAG QAKGKKIRNVEEALKTYEKYRADINKKINAKDRAAIAAALESVKLSDISSNLNRFSRGLG YAGKFTSLADWITEFGKGVRTENWRPLFVKTEAIIAGNAATALVALVFSILTGSALGIIG YGLLMAVTGALIDESLVEKANKFWGI >gi|296918660|gb|GG773040.1| GENE 19 20191 - 20766 356 191 aa, chain - ## HITS:1 COG:PSLT049 KEGG:ns NR:ns ## COG: PSLT049 COG0847 # Protein_GI_number: 17233424 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Salmonella typhimurium LT2 # 2 65 63 126 138 79 62.0 4e-15 MARQAYDWLSLAPLFLDTETTGLDNTAEALEIGLTDASGQVVFETRLKPTVAIGAQAAAV HGISEQALCGAPSWTDVARQLRHAIGDRPVIIFNARFDIRILKQTAAAHSDPADWLEELT VYCAMELAAGYYGATNRYGTISLACAASQAGLTWEGQAHSAIADARMTAGVVNAIAAYHL ELLQEQARLKI >gi|296918660|gb|GG773040.1| GENE 20 21085 - 21345 353 86 aa, chain - ## HITS:1 COG:SMa0473 KEGG:ns NR:ns ## COG: SMa0473 COG3668 # Protein_GI_number: 16262701 # Func_class: R General function prediction only # Function: Plasmid stabilization system protein # Organism: Sinorhizobium meliloti # 3 86 9 91 97 59 44.0 2e-09 MLASQDRKRIREYIAEQNLMAAIELDERIGYSASSLAGQPYKGRNGRVEGTRELVIHPHF VLVYEVDSQWGKVYILRVLHTAQKWP >gi|296918660|gb|GG773040.1| GENE 21 21363 - 21560 150 65 aa, chain - ## HITS:1 COG:no KEGG:pECS88_0101 NR:ns ## KEGG: pECS88_0101 # Name: yacA # Def: conserved hypothetical protein YacA, possible repressor # Organism: E.coli_S88 # Pathway: not_defined # 1 65 25 89 89 108 100.0 7e-23 MDRNGSQLIRDFMRQTVERQHNTWFRDQVEAGRQQLERGDVLPHDMVESSAAAWRDEMSR KVAGK >gi|296918660|gb|GG773040.1| GENE 22 21536 - 21631 70 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAQVNMSLRIDAELKDAFMALQKAWTVMALS Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:43:08 2011 Seq name: gi|296918659|gb|GG773041.1| Escherichia coli MS 110-3 genomic scaffold Scfld668, whole genome shotgun sequence Length of sequence - 253306 bp Number of predicted genes - 240, with homology - 239 Number of transcription units - 121, operones - 53 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 76 - 135 6.7 1 1 Op 1 5/0.200 + CDS 162 - 854 552 ## COG2186 Transcriptional regulators 2 1 Op 2 . + CDS 877 - 2304 881 ## COG0477 Permeases of the major facilitator superfamily 3 2 Op 1 13/0.000 - CDS 2270 - 3262 831 ## COG1609 Transcriptional regulators 4 2 Op 2 8/0.025 - CDS 3266 - 4210 815 ## COG0524 Sugar kinases, ribokinase family 5 3 Op 1 16/0.000 - CDS 4321 - 5211 1128 ## COG1879 ABC-type sugar transport system, periplasmic component 6 3 Op 2 21/0.000 - CDS 5236 - 6201 1313 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 7 3 Op 3 9/0.025 - CDS 6206 - 7711 1740 ## COG1129 ABC-type sugar transport system, ATPase component 8 3 Op 4 4/0.275 - CDS 7719 - 8138 379 ## COG1869 ABC-type ribose transport system, auxiliary component - Prom 8233 - 8292 4.1 - Term 8259 - 8299 5.6 9 4 Tu 1 . - CDS 8305 - 10173 1708 ## COG3158 K+ transporter - Prom 10315 - 10374 4.5 + Prom 10300 - 10359 2.8 10 5 Op 1 7/0.050 + CDS 10396 - 11892 1309 ## COG0714 MoxR-like ATPases 11 5 Op 2 . + CDS 11886 - 13337 1155 ## COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 12 6 Tu 1 . - CDS 13342 - 14334 1223 ## COG2502 Asparagine synthetase A - Prom 14355 - 14414 3.1 + Prom 14401 - 14460 6.7 13 7 Op 1 4/0.275 + CDS 14486 - 14944 473 ## COG1522 Transcriptional regulators + Prom 14953 - 15012 2.0 14 7 Op 2 5/0.200 + CDS 15034 - 15477 474 ## COG0716 Flavodoxins + Prom 15704 - 15763 4.7 15 8 Op 1 24/0.000 + CDS 15856 - 17745 2064 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 16 8 Op 2 3/0.575 + CDS 17809 - 18432 540 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Term 18520 - 18571 4.2 + Prom 18905 - 18964 5.8 17 9 Op 1 8/0.025 + CDS 19049 - 19429 174 ## COG3312 F0F1-type ATP synthase, subunit I 18 9 Op 2 40/0.000 + CDS 19438 - 20253 785 ## COG0356 F0F1-type ATP synthase, subunit a 19 9 Op 3 37/0.000 + CDS 20300 - 20539 378 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 20 9 Op 4 38/0.000 + CDS 20601 - 21071 592 ## COG0711 F0F1-type ATP synthase, subunit b 21 9 Op 5 41/0.000 + CDS 21086 - 21619 585 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 22 9 Op 6 42/0.000 + CDS 21632 - 23173 1715 ## COG0056 F0F1-type ATP synthase, alpha subunit 23 9 Op 7 42/0.000 + CDS 23250 - 24113 1002 ## COG0224 F0F1-type ATP synthase, gamma subunit 24 9 Op 8 42/0.000 + CDS 24140 - 25522 1713 ## COG0055 F0F1-type ATP synthase, beta subunit 25 9 Op 9 6/0.125 + CDS 25549 - 25962 457 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 25985 - 26018 4.5 26 10 Tu 1 9/0.025 + CDS 26316 - 27686 1637 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 27 11 Tu 1 2/0.825 + CDS 27847 - 29676 2378 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 29682 - 29719 5.3 + Prom 29852 - 29911 5.8 28 12 Op 1 39/0.000 + CDS 29990 - 31030 1189 ## COG0226 ABC-type phosphate transport system, periplasmic component 29 12 Op 2 38/0.000 + CDS 31117 - 32076 1249 ## COG0573 ABC-type phosphate transport system, permease component 30 12 Op 3 41/0.000 + CDS 32076 - 32966 1140 ## COG0581 ABC-type phosphate transport system, permease component 31 12 Op 4 32/0.000 + CDS 33057 - 33830 345 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 32 12 Op 5 1/0.925 + CDS 33845 - 34570 881 ## COG0704 Phosphate uptake regulator + Term 34580 - 34622 9.1 + Prom 34587 - 34646 8.9 33 13 Tu 1 . + CDS 34856 - 35692 564 ## COG3711 Transcriptional antiterminator + Term 35740 - 35795 12.3 + Prom 35727 - 35786 4.9 34 14 Op 1 8/0.025 + CDS 35826 - 37700 1281 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 35 14 Op 2 1/0.925 + CDS 37719 - 39113 1237 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 39135 - 39178 9.2 36 15 Tu 1 . + CDS 39199 - 40815 1454 ## COG4580 Maltoporin (phage lambda and maltose receptor) + Prom 40828 - 40887 29.4 37 16 Op 1 . + CDS 40947 - 42041 900 ## COG2382 Enterochelin esterase and related enzymes 38 16 Op 2 . + CDS 42056 - 42778 777 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 42791 - 42830 7.6 39 17 Op 1 . - CDS 42860 - 43333 168 ## ECS88_4139 inner membrane protein 40 17 Op 2 1/0.925 - CDS 43400 - 43780 324 ## COG0637 Predicted phosphatase/phosphohexomutase 41 17 Op 3 . - CDS 43862 - 44065 302 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 44197 - 44256 1.8 + Prom 44110 - 44169 2.6 42 18 Tu 1 . + CDS 44232 - 45569 1721 ## COG2252 Permeases - Term 45578 - 45614 5.3 43 19 Op 1 3/0.575 - CDS 45650 - 46216 737 ## COG0431 Predicted flavoprotein 44 19 Op 2 4/0.275 - CDS 46238 - 46999 495 ## COG2091 Phosphopantetheinyl transferase - Prom 47082 - 47141 5.2 45 20 Op 1 9/0.025 - CDS 47144 - 48103 760 ## COG0583 Transcriptional regulator 46 20 Op 2 3/0.575 - CDS 48078 - 49253 883 ## COG0477 Permeases of the major facilitator superfamily - Prom 49280 - 49339 2.5 - Term 49344 - 49372 0.6 47 21 Op 1 3/0.575 - CDS 49385 - 50632 862 ## COG0814 Amino acid permeases - Term 50673 - 50711 3.7 48 21 Op 2 . - CDS 50724 - 52139 2014 ## COG3033 Tryptophanase - Prom 52263 - 52322 5.0 - Term 52645 - 52686 0.8 49 22 Op 1 10/0.000 - CDS 52720 - 54084 1580 ## COG0486 Predicted GTPase - Prom 54132 - 54191 7.3 50 22 Op 2 22/0.000 - CDS 54201 - 55847 1855 ## COG0706 Preprotein translocase subunit YidC - Prom 55911 - 55970 3.9 51 22 Op 3 . - CDS 56071 - 56397 246 ## COG0594 RNase P protein component 52 22 Op 4 . - CDS 56447 - 56587 228 ## PROTEIN SUPPORTED gi|15804297|ref|NP_290336.1| 50S ribosomal protein L34 - Prom 56683 - 56742 6.3 53 23 Op 1 16/0.000 + CDS 57278 - 58597 1212 ## COG0593 ATPase involved in DNA replication initiation 54 23 Op 2 18/0.000 + CDS 58602 - 59702 1227 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 55 23 Op 3 9/0.025 + CDS 59702 - 60775 822 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 56 23 Op 4 1/0.925 + CDS 60804 - 63218 3045 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Prom 63333 - 63392 58.0 57 24 Op 1 . + CDS 63484 - 63882 456 ## COG3753 Uncharacterized protein conserved in bacteria + Term 63889 - 63929 4.3 + Prom 63887 - 63946 3.8 58 24 Op 2 . + CDS 63997 - 64809 1183 ## COG0561 Predicted hydrolases of the HAD superfamily 59 25 Tu 1 . - CDS 64866 - 65522 330 ## ECS88_4119 hypothetical protein - Prom 65666 - 65725 6.5 + Prom 65620 - 65679 6.6 60 26 Op 1 1/0.925 + CDS 65801 - 66490 692 ## COG2186 Transcriptional regulators 61 26 Op 2 2/0.825 + CDS 66487 - 67365 498 ## COG3734 2-keto-3-deoxy-galactonokinase 62 26 Op 3 1/0.925 + CDS 67349 - 67966 646 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 63 26 Op 4 7/0.050 + CDS 67963 - 69111 1538 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 64 27 Tu 1 . + CDS 69231 - 70523 1425 ## COG0477 Permeases of the major facilitator superfamily + Term 70534 - 70580 5.6 65 28 Tu 1 . - CDS 70484 - 71584 516 ## COG0644 Dehydrogenases (flavoproteins) - Prom 71642 - 71701 2.5 + Prom 71601 - 71660 4.7 66 29 Tu 1 . + CDS 71685 - 72899 762 ## UTI89_C4240 hypothetical protein 67 30 Tu 1 . - CDS 72903 - 73166 223 ## COG5645 Predicted periplasmic lipoprotein - Prom 73354 - 73413 3.0 68 31 Tu 1 4/0.275 + CDS 73541 - 73954 616 ## COG0071 Molecular chaperone (small heat shock protein) + Term 73960 - 73995 -1.0 69 32 Tu 1 1/0.925 + CDS 74066 - 74494 514 ## COG0071 Molecular chaperone (small heat shock protein) + Term 74510 - 74542 5.4 + Prom 74515 - 74574 5.0 70 33 Tu 1 . + CDS 74691 - 76352 1840 ## COG2985 Predicted permease + Term 76363 - 76405 6.4 71 34 Tu 1 . - CDS 76442 - 77308 491 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 77338 - 77397 2.6 + Prom 77264 - 77323 5.0 72 35 Op 1 4/0.275 + CDS 77475 - 79190 1763 ## COG4146 Predicted symporter 73 35 Op 2 . + CDS 79187 - 80251 769 ## COG3119 Arylsulfatase A and related enzymes 74 35 Op 3 . + CDS 80266 - 80679 337 ## COG3119 Arylsulfatase A and related enzymes 75 35 Op 4 . + CDS 80739 - 81086 423 ## COG2149 Predicted membrane protein 76 35 Op 5 . + CDS 81076 - 81438 213 ## ECS88_4100 hypothetical protein 77 35 Op 6 . + CDS 81435 - 81932 397 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Term 81878 - 81927 2.0 78 36 Tu 1 . - CDS 81940 - 83091 1200 ## COG0477 Permeases of the major facilitator superfamily - Prom 83146 - 83205 5.3 + Prom 83440 - 83499 4.8 79 37 Op 1 32/0.000 + CDS 83729 - 85417 1922 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 80 37 Op 2 1/0.925 + CDS 85421 - 85711 394 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Term 85734 - 85772 6.0 81 38 Tu 1 5/0.200 + CDS 85784 - 86374 744 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Prom 86388 - 86447 1.7 82 39 Op 1 5/0.200 + CDS 86485 - 87876 1160 ## COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific 83 39 Op 2 3/0.575 + CDS 87886 - 89205 1235 ## COG2271 Sugar phosphate permease + Prom 89257 - 89316 2.3 84 39 Op 3 . + CDS 89343 - 90734 1742 ## COG2271 Sugar phosphate permease + Term 90755 - 90800 14.2 85 40 Tu 1 . - CDS 90798 - 92564 1520 ## COG1001 Adenine deaminase - Prom 92614 - 92673 6.1 + Prom 92549 - 92608 5.8 86 41 Op 1 . + CDS 92727 - 94073 1227 ## COG2252 Permeases 87 41 Op 2 . + CDS 94126 - 94578 411 ## APECO1_2789 hypothetical protein + Term 94617 - 94665 -0.8 + Prom 94656 - 94715 1.7 88 42 Tu 1 . + CDS 94741 - 95979 1149 ## COG2814 Arabinose efflux permease 89 43 Tu 1 . - CDS 96020 - 96313 194 ## E2348C_3976 hypothetical protein - Prom 96513 - 96572 5.6 + Prom 96452 - 96511 5.8 90 44 Tu 1 . + CDS 96535 - 97353 779 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Term 97233 - 97289 5.2 91 45 Tu 1 . - CDS 97357 - 98280 718 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 98398 - 98457 10.2 92 46 Tu 1 . - CDS 98577 - 98720 71 ## ECP_3864 hypothetical protein 93 47 Tu 1 . - CDS 99515 - 100507 697 ## COG3943 Virulence protein - TRNA 100609 - 100699 75.2 # SeC(p) TCA 0 0 + Prom 100792 - 100851 10.5 94 48 Op 1 3/0.575 + CDS 100992 - 102374 482 ## PROTEIN SUPPORTED gi|90020673|ref|YP_526500.1| ribosomal protein L9 95 48 Op 2 . + CDS 102384 - 104702 2013 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Term 104785 - 104820 -1.0 + Prom 104878 - 104937 3.9 96 49 Op 1 5/0.200 + CDS 104997 - 106550 814 ## COG3711 Transcriptional antiterminator 97 49 Op 2 8/0.025 + CDS 106577 - 107047 469 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 98 49 Op 3 7/0.050 + CDS 107065 - 107379 460 ## COG1445 Phosphotransferase system fructose-specific component IIB 99 49 Op 4 1/0.925 + CDS 107404 - 108495 1341 ## COG1299 Phosphotransferase system, fructose-specific IIC component 100 49 Op 5 1/0.925 + CDS 108507 - 109358 662 ## COG0191 Fructose/tagatose bisphosphate aldolase 101 49 Op 6 . + CDS 109439 - 110299 869 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 110308 - 110335 1.5 102 49 Op 7 1/0.925 + CDS 110347 - 111279 682 ## COG1940 Transcriptional regulator/sugar kinase 103 49 Op 8 . + CDS 111260 - 111940 533 ## COG3822 ABC-type sugar transport system, auxiliary component + Term 111946 - 111990 6.2 - Term 111933 - 111977 6.2 104 50 Op 1 . - CDS 111984 - 113693 1391 ## ECP_3753 AsmA family; region: AsmA; pfam05170 - Prom 113719 - 113778 1.8 105 50 Op 2 . - CDS 113814 - 115205 1657 ## COG2233 Xanthine/uracil permeases - Prom 115229 - 115288 4.8 + Prom 115294 - 115353 7.2 106 51 Tu 1 . + CDS 115485 - 116690 1461 ## COG0786 Na+/glutamate symporter + Term 116699 - 116732 4.4 - Term 116687 - 116720 4.4 107 52 Op 1 4/0.275 - CDS 116724 - 118805 2133 ## COG1200 RecG-like helicase 108 52 Op 2 5/0.200 - CDS 118811 - 119500 637 ## COG0566 rRNA methylases 109 52 Op 3 18/0.000 - CDS 119507 - 121615 1927 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 110 52 Op 4 25/0.000 - CDS 121634 - 121909 490 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 111 52 Op 5 . - CDS 121964 - 122587 544 ## COG0194 Guanylate kinase - Prom 122628 - 122687 4.6 + Prom 122588 - 122647 2.0 112 53 Op 1 . + CDS 122727 - 122984 59 ## UTI89_C4192 hypothetical protein 113 53 Op 2 . + CDS 122845 - 124527 948 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) - Term 124467 - 124504 5.3 114 54 Tu 1 . - CDS 124524 - 125141 875 ## COG2860 Predicted membrane protein - Prom 125308 - 125367 4.9 115 55 Tu 1 . - CDS 125433 - 126257 413 ## ECS88_4059 DNA-damage-inducible protein D - Prom 126287 - 126346 4.9 116 56 Tu 1 . - CDS 126958 - 127245 104 ## ECs1588 transcriptional activator - Prom 127483 - 127542 5.3 + Prom 127258 - 127317 5.0 117 57 Tu 1 . + CDS 127505 - 127948 258 ## ETA_24190 hypothetical protein 118 58 Tu 1 . - CDS 127965 - 128156 87 ## gi|237703436|ref|ZP_04533917.1| predicted protein 119 59 Tu 1 . - CDS 128346 - 128828 207 ## CMM_2222 hypothetical protein - Prom 128975 - 129034 3.6 + Prom 129255 - 129314 3.1 120 60 Op 1 . + CDS 129501 - 129614 84 ## 121 60 Op 2 . + CDS 129710 - 130135 83 ## gi|315285435|gb|EFU44880.1| hypothetical protein HMPREF9539_04634 - Term 130092 - 130135 -0.6 122 61 Op 1 . - CDS 130155 - 132272 105 ## SG0943 hypothetical protein 123 61 Op 2 . - CDS 132257 - 133600 793 ## COG1835 Predicted acyltransferases 124 61 Op 3 . - CDS 133605 - 133778 95 ## gi|309700538|emb|CBI99833.1| prophage protein - Prom 133806 - 133865 7.1 + Prom 133901 - 133960 4.5 125 62 Tu 1 . + CDS 134097 - 134408 70 ## gi|237703430|ref|ZP_04533911.1| predicted protein + Term 134514 - 134555 1.2 126 63 Op 1 . - CDS 134382 - 135119 211 ## gi|237703429|ref|ZP_04533910.1| predicted protein 127 63 Op 2 . - CDS 135109 - 135339 172 ## gi|237703428|ref|ZP_04533909.1| predicted protein - Prom 135425 - 135484 2.8 128 64 Op 1 . - CDS 135516 - 137867 670 ## COG4643 Uncharacterized protein conserved in bacteria 129 64 Op 2 . - CDS 137880 - 138482 416 ## ETA_24230 conserved hypothetical protein, related to bacteriophage P27 130 64 Op 3 . - CDS 138475 - 138696 281 ## SbBS512_E4082 hypothetical protein 131 64 Op 4 . - CDS 138693 - 138956 123 ## gi|237703424|ref|ZP_04533905.1| predicted protein 132 64 Op 5 . - CDS 138953 - 139147 135 ## gi|237703423|ref|ZP_04533904.1| predicted protein 133 64 Op 6 . - CDS 139140 - 140207 286 ## Dda3937_02195 putative prophage protein - Term 140226 - 140262 2.0 134 65 Op 1 . - CDS 140376 - 141209 622 ## COG3561 Phage anti-repressor protein 135 65 Op 2 . - CDS 141222 - 141653 267 ## SbBS512_E4075 hypothetical protein 136 65 Op 3 . - CDS 141653 - 141871 94 ## Dd1591_3999 phage transcriptional regulator AlpA - Prom 141977 - 142036 9.2 137 66 Op 1 . - CDS 142343 - 142891 132 ## ECO103_4536 hypothetical protein 138 66 Op 2 . - CDS 142990 - 144258 366 ## COG0582 Integrase - Prom 144369 - 144428 5.1 - Term 144376 - 144407 -0.9 139 67 Tu 1 . - CDS 144447 - 145310 1172 ## COG1561 Uncharacterized stress-induced protein - Prom 145338 - 145397 5.5 + Prom 145348 - 145407 4.8 140 68 Tu 1 . + CDS 145437 - 146153 827 ## COG0689 RNase PH + Term 146161 - 146190 2.1 + Prom 146177 - 146236 28.9 141 69 Tu 1 . + CDS 146262 - 146903 808 ## COG0461 Orotate phosphoribosyltransferase + Term 146911 - 146948 7.8 - Term 146899 - 146934 7.4 142 70 Tu 1 . - CDS 146940 - 147536 652 ## COG1309 Transcriptional regulator - Term 147537 - 147572 -0.5 143 71 Op 1 5/0.200 - CDS 147643 - 148101 609 ## COG0756 dUTPase 144 71 Op 2 . - CDS 148079 - 149299 1042 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase - Prom 149330 - 149389 2.3 + Prom 149216 - 149275 2.4 145 72 Tu 1 . + CDS 149471 - 150139 412 ## COG2003 DNA repair proteins + Prom 150157 - 150216 3.4 146 73 Op 1 16/0.000 + CDS 150356 - 150592 403 ## PROTEIN SUPPORTED gi|15804178|ref|NP_290217.1| 50S ribosomal protein L28 147 73 Op 2 5/0.200 + CDS 150613 - 150780 280 ## PROTEIN SUPPORTED gi|15804177|ref|NP_290216.1| 50S ribosomal protein L33 + Term 150798 - 150840 5.2 + Prom 150796 - 150855 1.9 148 74 Tu 1 . + CDS 150878 - 151687 800 ## COG0266 Formamidopyrimidine-DNA glycosylase 149 75 Op 1 6/0.125 - CDS 151726 - 152205 388 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 150 75 Op 2 . - CDS 152213 - 153490 1155 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase - Prom 153573 - 153632 6.4 151 76 Op 1 5/0.200 + CDS 153939 - 154961 627 ## COG0859 ADP-heptose:LPS heptosyltransferase 152 76 Op 2 . + CDS 154958 - 156082 659 ## COG0438 Glycosyltransferase 153 76 Op 3 . + CDS 156075 - 156872 559 ## ECS88_4044 kinase that phosphorylates core heptose of lipopolysaccharide 154 76 Op 4 5/0.200 + CDS 156888 - 157904 527 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 155 76 Op 5 . + CDS 157921 - 158916 332 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 156 76 Op 6 . + CDS 158926 - 159618 437 ## ECS88_4041 lipopolysaccharide core biosynthesis protein 157 76 Op 7 2/0.825 + CDS 159644 - 160672 632 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases + Prom 160674 - 160733 6.0 158 76 Op 8 4/0.275 + CDS 160754 - 161737 6 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Prom 162423 - 162482 6.7 159 77 Tu 1 . + CDS 162566 - 163036 75 ## COG3307 Lipid A core - O-antigen ligase and related enzymes + Term 163045 - 163094 11.8 - Term 163032 - 163080 11.6 160 78 Op 1 11/0.000 - CDS 163106 - 164086 831 ## COG0859 ADP-heptose:LPS heptosyltransferase 161 78 Op 2 6/0.125 - CDS 164090 - 165136 904 ## COG0859 ADP-heptose:LPS heptosyltransferase 162 78 Op 3 . - CDS 165146 - 166078 1131 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 166296 - 166355 3.7 + Prom 166207 - 166266 3.0 163 79 Op 1 9/0.025 + CDS 166292 - 167488 1576 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 164 79 Op 2 5/0.200 + CDS 167498 - 168523 1099 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 168567 - 168597 3.0 + Prom 168549 - 168608 12.5 165 80 Tu 1 . + CDS 168796 - 169830 486 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Term 169774 - 169815 -0.5 166 81 Op 1 3/0.575 - CDS 169817 - 170776 723 ## COG2861 Uncharacterized protein conserved in bacteria 167 81 Op 2 4/0.275 - CDS 170780 - 172039 1294 ## COG4942 Membrane-bound metallopeptidase 168 81 Op 3 . - CDS 172073 - 173617 1771 ## COG0696 Phosphoglyceromutase - Prom 173648 - 173707 4.2 + Prom 173763 - 173822 5.1 169 82 Tu 1 . + CDS 173862 - 174293 411 ## COG0607 Rhodanese-related sulfurtransferase 170 83 Op 1 9/0.025 + CDS 174434 - 174685 350 ## COG0695 Glutaredoxin and related proteins 171 83 Op 2 7/0.050 + CDS 174749 - 175216 508 ## COG1952 Preprotein translocase subunit SecB 172 83 Op 3 6/0.125 + CDS 175216 - 176235 985 ## COG0240 Glycerol-3-phosphate dehydrogenase + Term 176261 - 176302 5.1 173 84 Tu 1 . + CDS 176315 - 177136 884 ## COG1045 Serine acetyltransferase 174 85 Op 1 4/0.275 - CDS 177191 - 177664 467 ## COG0219 Predicted rRNA methylase (SpoU class) 175 85 Op 2 5/0.200 - CDS 177712 - 178902 1433 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 176 85 Op 3 4/0.275 - CDS 178899 - 179675 651 ## COG2186 Transcriptional regulators 177 85 Op 4 3/0.575 - CDS 179675 - 181330 1788 ## COG1620 L-lactate permease - Term 181556 - 181597 8.8 178 86 Op 1 . - CDS 181740 - 186491 4010 ## COG5295 Autotransporter adhesin 179 86 Op 2 . - CDS 186535 - 186984 189 ## ECP_3702 protein of unknown function (DUF3251); region: DUF3251; cl08186 180 86 Op 3 . - CDS 187060 - 187218 171 ## c4423 hypothetical protein - Prom 187347 - 187406 4.8 - Term 187697 - 187732 4.8 181 87 Tu 1 . - CDS 187777 - 188139 520 ## ECDH10B_3784 hypothetical protein - Prom 188223 - 188282 6.2 + Prom 188321 - 188380 3.0 182 88 Tu 1 . + CDS 188423 - 188632 276 ## ECS88_4015 hypothetical protein - Term 188763 - 188804 1.3 183 89 Op 1 7/0.050 - CDS 188820 - 189269 407 ## COG3722 Transcriptional regulator 184 89 Op 2 11/0.000 - CDS 189269 - 190417 1526 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 190644 - 190703 2.4 - Term 190617 - 190678 4.4 185 89 Op 3 . - CDS 190736 - 192649 2671 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component + Prom 192979 - 193038 5.9 186 90 Op 1 . + CDS 193184 - 193546 279 ## EcSMS35_3931 hypothetical protein 187 90 Op 2 . + CDS 193549 - 194685 910 ## COG1566 Multidrug resistance efflux pump 188 90 Op 3 4/0.275 + CDS 194756 - 195364 722 ## COG0625 Glutathione S-transferase 189 90 Op 4 7/0.050 + CDS 195462 - 196853 1373 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 190 90 Op 5 2/0.825 + CDS 196850 - 198694 1854 ## COG3276 Selenocysteine-specific translation elongation factor + Term 198696 - 198750 2.3 + Prom 198696 - 198755 6.4 191 91 Tu 1 . + CDS 198885 - 200036 1247 ## COG1454 Alcohol dehydrogenase, class IV + Term 200052 - 200085 4.0 + Prom 200081 - 200140 6.4 192 92 Tu 1 . + CDS 200166 - 201461 937 ## COG3177 Uncharacterized conserved protein + Prom 201525 - 201584 22.9 193 93 Tu 1 . + CDS 201608 - 203146 1892 ## COG1012 NAD-dependent aldehyde dehydrogenases - Term 203143 - 203179 4.6 194 94 Op 1 8/0.025 - CDS 203193 - 203888 560 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 195 94 Op 2 9/0.025 - CDS 203882 - 204742 956 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 196 94 Op 3 3/0.575 - CDS 204735 - 205397 793 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 197 94 Op 4 3/0.575 - CDS 205394 - 206890 1347 ## COG1070 Sugar (pentulose and hexulose) kinases 198 94 Op 5 9/0.025 - CDS 206894 - 207880 371 ## PROTEIN SUPPORTED gi|239995924|ref|ZP_04716448.1| ribosomal protein L22 199 94 Op 6 11/0.000 - CDS 207893 - 209170 783 ## PROTEIN SUPPORTED gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 200 94 Op 7 . - CDS 209173 - 209640 305 ## COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - Prom 209693 - 209752 3.3 201 95 Op 1 . - CDS 209754 - 210674 466 ## ECS88_3996 hypothetical protein 202 95 Op 2 3/0.575 - CDS 210697 - 211161 444 ## COG2731 Beta-galactosidase, beta subunit 203 95 Op 3 . - CDS 211173 - 212171 1067 ## COG2055 Malate/L-lactate dehydrogenases - Prom 212246 - 212305 5.2 + Prom 212162 - 212221 6.0 204 96 Tu 1 . + CDS 212372 - 213220 647 ## COG1414 Transcriptional regulator 205 97 Tu 1 . + CDS 213322 - 213795 196 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 + Term 213798 - 213844 1.3 206 98 Tu 1 . - CDS 213947 - 215200 1269 ## COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase - Prom 215231 - 215290 2.4 207 99 Tu 1 . - CDS 215378 - 217408 1725 ## COG0366 Glycosidases - Prom 217649 - 217708 6.5 208 100 Tu 1 . + CDS 217980 - 218552 498 ## COG2992 Uncharacterized FlgJ-related protein + Term 218565 - 218610 11.5 209 101 Tu 1 4/0.275 - CDS 218660 - 219838 1036 ## COG1609 Transcriptional regulators - Term 219855 - 219899 11.2 210 102 Op 1 11/0.000 - CDS 219916 - 221097 1055 ## COG4214 ABC-type xylose transport system, permease component 211 102 Op 2 11/0.000 - CDS 221075 - 222652 223 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 212 102 Op 3 . - CDS 222694 - 223686 988 ## COG4213 ABC-type xylose transport system, periplasmic component - Prom 223905 - 223964 6.9 + Prom 223896 - 223955 4.7 213 103 Op 1 11/0.000 + CDS 224052 - 225374 1383 ## COG2115 Xylose isomerase + Term 225376 - 225413 -0.3 214 103 Op 2 1/0.925 + CDS 225446 - 226357 471 ## COG1070 Sugar (pentulose and hexulose) kinases 215 103 Op 3 3/0.575 + CDS 226219 - 227010 410 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 227013 - 227061 1.1 + Prom 227043 - 227102 5.8 216 104 Op 1 1/0.925 + CDS 227179 - 227520 348 ## COG4682 Predicted membrane protein 217 104 Op 2 . + CDS 227566 - 228003 513 ## COG4682 Predicted membrane protein + Term 228013 - 228050 5.3 - Term 227993 - 228043 6.2 218 105 Tu 1 . - CDS 228045 - 229040 766 ## COG3274 Uncharacterized protein conserved in bacteria - Prom 229172 - 229231 3.8 + Prom 229105 - 229164 4.5 219 106 Op 1 . + CDS 229218 - 229514 264 ## ECS88_3978 hypothetical protein + Prom 229518 - 229577 3.4 220 106 Op 2 19/0.000 + CDS 229609 - 230520 1069 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 221 106 Op 3 . + CDS 230530 - 232599 2829 ## COG0751 Glycyl-tRNA synthetase, beta subunit + Term 232626 - 232666 8.2 + Prom 232613 - 232672 18.2 222 107 Tu 1 . + CDS 232883 - 233095 119 ## ECP_3660 Hok/gef family; region: HOK_GEF; cl11494 + Term 233104 - 233135 4.1 - Term 233221 - 233256 4.9 223 108 Tu 1 4/0.275 - CDS 233283 - 233495 298 ## COG1278 Cold shock proteins - Prom 233690 - 233749 5.6 - Term 233718 - 233749 4.1 224 109 Tu 1 . - CDS 233776 - 234066 269 ## COG2944 Predicted transcriptional regulator + Prom 234312 - 234371 4.9 225 110 Tu 1 . + CDS 234500 - 235210 754 ## APECO1_2894 hypothetical protein + Term 235220 - 235250 0.2 - Term 235200 - 235245 6.3 226 111 Tu 1 . - CDS 235260 - 236234 866 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 236257 - 236316 3.3 - Term 236289 - 236328 6.0 227 112 Tu 1 . - CDS 236338 - 236997 214 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 - Prom 237065 - 237124 2.2 + Prom 236973 - 237032 5.7 228 113 Tu 1 . + CDS 237150 - 239483 1807 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Term 239354 - 239389 6.1 229 114 Op 1 5/0.200 - CDS 239452 - 239892 411 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 230 114 Op 2 . - CDS 239889 - 240452 356 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) - Prom 240606 - 240665 6.5 + Prom 240474 - 240533 3.1 231 115 Tu 1 . + CDS 240610 - 241308 582 ## COG5571 Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion + Prom 241328 - 241387 4.7 232 116 Tu 1 . + CDS 241537 - 242745 1614 ## COG0477 Permeases of the major facilitator superfamily + Term 242832 - 242858 -1.0 + Prom 242888 - 242947 15.3 233 117 Tu 1 . + CDS 243130 - 244821 1333 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase + Term 244873 - 244919 6.6 + TRNA 244910 - 244986 85.1 # Pro CGG 0 0 + Prom 245528 - 245587 3.2 234 118 Tu 1 . + CDS 245753 - 247360 2099 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 247424 - 247459 -0.1 235 119 Tu 1 . - CDS 247350 - 247493 58 ## EcSMS35_3864 hypothetical protein - Prom 247697 - 247756 2.4 + Prom 247432 - 247491 1.9 236 120 Op 1 49/0.000 + CDS 247511 - 248530 355 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 237 120 Op 2 44/0.000 + CDS 248540 - 249442 1271 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 238 120 Op 3 44/0.000 + CDS 249453 - 250436 573 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 239 120 Op 4 . + CDS 250433 - 251437 796 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 251447 - 251477 1.7 240 121 Tu 1 . - CDS 251467 - 252738 1081 ## COG0814 Amino acid permeases Predicted protein(s) >gi|296918659|gb|GG773041.1| GENE 1 162 - 854 552 230 aa, chain + ## HITS:1 COG:ZyieP KEGG:ns NR:ns ## COG: ZyieP COG2186 # Protein_GI_number: 15804355 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 EDL933 # 1 230 1 230 230 459 99.0 1e-129 MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVSRTAVREAVKT LTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQVIDHFLVMRICLEPQACL LAAKVGTAEQKAHLNTLMAEMAALKENFRRERWIEVDMAWHEHIYEMSANPFLTSFASLF HSVYHTYFTSITSDTVIKLDLHQAIVDAIIQSDGDAAFKACQALLRSPDK >gi|296918659|gb|GG773041.1| GENE 2 877 - 2304 881 475 aa, chain + ## HITS:1 COG:ECs4696 KEGG:ns NR:ns ## COG: ECs4696 COG0477 # Protein_GI_number: 15833950 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 475 1 475 475 828 99.0 0 MSDKKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVA MLIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQLVVFRVIQGIGGAMMMPVA RLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVTWATWHWIFLINIPIGIAGLL YAHKHMPNFITARRRFDTTGFLLFGLSLVLFSSGIELFGEKIVASWIALTVIVTSIGLLL LYILHARRTPNPLISLDLFKTRTFSIGIVGNIATRLGTGCVPFLMPLMLQVGFGYQAFIA GCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGITVIIGLMIAQFSLQSPAMAIWMLILP LFILGMAMSTQFTAMNTITLADLTDDNASSGNSVLAVTQQLSISLGVAVSAAVLRVYEGM EGTTTVEQFHYTFITMGIITVASAAMFMLLKTTDGNNLIKRQRKSKPNHVPSESE >gi|296918659|gb|GG773041.1| GENE 3 2270 - 3262 831 330 aa, chain - ## HITS:1 COG:ECs4695 KEGG:ns NR:ns ## COG: ECs4695 COG1609 # Protein_GI_number: 15833949 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 659 99.0 0 MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTH TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLL LLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRI ACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQ AVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELA IDVLIHRITQPALQQQRLQLTPILMERGSA >gi|296918659|gb|GG773041.1| GENE 4 3266 - 4210 815 314 aa, chain - ## HITS:1 COG:ECs4694 KEGG:ns NR:ns ## COG: ECs4694 COG0524 # Protein_GI_number: 15833948 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 6 314 1 309 309 528 99.0 1e-150 MDIPNMQNAGSLVVFGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSG ANIAFIACTGDDSIGESVRQQLATDNIDISPVSVIKGESTGVALIFVNGEGENVIGIHAG ANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPD ELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNG EGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSV PWREEIDAFLDRQR >gi|296918659|gb|GG773041.1| GENE 5 4321 - 5211 1128 296 aa, chain - ## HITS:1 COG:ECs4693 KEGG:ns NR:ns ## COG: ECs4693 COG1879 # Protein_GI_number: 15833947 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 493 100.0 1e-139 MNMKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLV VLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKG EVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFN VLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFD GTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVVKQ >gi|296918659|gb|GG773041.1| GENE 6 5236 - 6201 1313 321 aa, chain - ## HITS:1 COG:ECs4692 KEGG:ns NR:ns ## COG: ECs4692 COG1172 # Protein_GI_number: 15833946 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 481 100.0 1e-135 MTTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMA VGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVA KGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMG IVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVA RLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSY YQMIVKAVVILLAVLVDNKKQ >gi|296918659|gb|GG773041.1| GENE 7 6206 - 7711 1740 501 aa, chain - ## HITS:1 COG:rbsA KEGG:ns NR:ns ## COG: rbsA COG1129 # Protein_GI_number: 16131617 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Escherichia coli K12 # 1 501 1 501 501 966 99.0 0 MEALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGT LLWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYA EADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESL FRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGR KLEDQYPHLNKAPGDIRLKVDNLCGPGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYG ALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFS RAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILD EPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTRE QATQEVLMAAAVGKLNRVNQE >gi|296918659|gb|GG773041.1| GENE 8 7719 - 8138 379 139 aa, chain - ## HITS:1 COG:rbsD KEGG:ns NR:ns ## COG: rbsD COG1869 # Protein_GI_number: 16131616 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Escherichia coli K12 # 1 139 13 151 151 250 97.0 5e-67 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN EMQVEAVIIAEEIKQHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAGSQAVI RSGECSPYANIILCAGVTF >gi|296918659|gb|GG773041.1| GENE 9 8305 - 10173 1708 622 aa, chain - ## HITS:1 COG:ECs4689 KEGG:ns NR:ns ## COG: ECs4689 COG3158 # Protein_GI_number: 15833943 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Escherichia coli O157:H7 # 1 622 1 622 622 1177 99.0 0 MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLL IFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSMLVIMGLIGGSFFYGEVVIT PAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLIL AGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGK FPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLIIAALATVIA SQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVSFEHS SNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLL SGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYM SRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASY GWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLILGKRPWYLRLRGKLYLLLQRNAL RAPDQFEIPPNRVIELGTQVEI >gi|296918659|gb|GG773041.1| GENE 10 10396 - 11892 1309 498 aa, chain + ## HITS:1 COG:ECs4688 KEGG:ns NR:ns ## COG: ECs4688 COG0714 # Protein_GI_number: 15833942 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Escherichia coli O157:H7 # 1 498 9 506 506 939 99.0 0 MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLK FAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKAG PAILNTLLTAINERQFRNGALVEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKV QDKANFRSMLTSQQDENDNPVPASLQITDEEYERWQKEIGEITLPDHVFELIFMLRQQLD KLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSLNLIQQQIDV LMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIRLGGIFSRRQQYQLPVNVTAS TLTLLLQKPLKLHDMEVVHISFERSALEQWLSKGGEIRGKLNGIGFAQKLNLEVDSAQHL VVRDVSLQGSTLALPGSSAEGLPGEIKQQLEELESDWRKQHALFSEQQKCLFIPGDWLGR IEASLQDVGAQIRQAQQC >gi|296918659|gb|GG773041.1| GENE 11 11886 - 13337 1155 483 aa, chain + ## HITS:1 COG:ECs4687 KEGG:ns NR:ns ## COG: ECs4687 COG2425 # Protein_GI_number: 15833941 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Escherichia coli O157:H7 # 1 473 1 473 483 890 99.0 0 MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKAAITDDVPRWREALRSR LKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRLNSPWAEQARQLVDANSTI TSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQERMTLSGQLEPILADNNTAA GRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQLGRSREAKSIPRNDAQMETFRT MVREPATVPEQVDGLQQSDDILRLLPPELATLGITELEYEFYRRLVEKQLLTYRLHGESW REKMIERPVVHKDYDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRIALAENRRCYI MLFSTEIVRYELSGPQGIEQAIRFLSQQFRGGTDLASCFRAIMERLQSREWFDADAVVIS DFIAQRLPDDVTSKVKELQRVHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRR WRR >gi|296918659|gb|GG773041.1| GENE 12 13342 - 14334 1223 330 aa, chain - ## HITS:1 COG:asnA KEGG:ns NR:ns ## COG: asnA COG2502 # Protein_GI_number: 16131612 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Escherichia coli K12 # 1 330 1 330 330 652 99.0 0 MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVK ALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWE RVMGDGERQFSTLKSTVEAIWEGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPEL DAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDYDDWSTPSELGHAGLNGDILVWN PVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLELEWHQALLRGEMPQTIGGGIGQSRL TMLLLQLPHIGQVQCGVWPAAVRESVPSLL >gi|296918659|gb|GG773041.1| GENE 13 14486 - 14944 473 152 aa, chain + ## HITS:1 COG:ECs4685 KEGG:ns NR:ns ## COG: ECs4685 COG1522 # Protein_GI_number: 15833939 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 296 100.0 8e-81 MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVEKMKQAGIITGARIDVS PKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTTGHYSIFIKVMCRSIDALQ HVLINKIQTIDEIQSTETLIVLQNPIMRTIKP >gi|296918659|gb|GG773041.1| GENE 14 15034 - 15477 474 147 aa, chain + ## HITS:1 COG:ECs4684 KEGG:ns NR:ns ## COG: ECs4684 COG0716 # Protein_GI_number: 15833938 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 273 97.0 9e-74 MADITLISGSTLGGAEYVAEHLAEKLEETGLTTETLHGPLLEDLSASGIWLVISSTHGAG DIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKIEAELKNSGAKQTGET LKINILDHDIPEDPAEEWLGSWINLLK >gi|296918659|gb|GG773041.1| GENE 15 15856 - 17745 2064 629 aa, chain + ## HITS:1 COG:gidA KEGG:ns NR:ns ## COG: gidA COG0445 # Protein_GI_number: 16131609 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Escherichia coli K12 # 1 629 1 629 629 1246 99.0 0 MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS IPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV PCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFAERNQHQIFLEPE GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL GTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRL KSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAE QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ ASRISGVTPAAISILLVWLKKQGMLRRSA >gi|296918659|gb|GG773041.1| GENE 16 17809 - 18432 540 207 aa, chain + ## HITS:1 COG:ECs4682 KEGG:ns NR:ns ## COG: ECs4682 COG0357 # Protein_GI_number: 15833936 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 411 100.0 1e-115 MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVV APYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPV QSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEY QVESVVKLQVPALDGERHLVVIKANKI >gi|296918659|gb|GG773041.1| GENE 17 19049 - 19429 174 126 aa, chain + ## HITS:1 COG:ECs4681 KEGG:ns NR:ns ## COG: ECs4681 COG3312 # Protein_GI_number: 15833935 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit I # Organism: Escherichia coli O157:H7 # 1 126 5 130 130 156 99.0 1e-38 MSVSLMSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGGLAVFLPNVLFMIFAWR HQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFLPLIVTWVLVLVVQILAPA VINNKG >gi|296918659|gb|GG773041.1| GENE 18 19438 - 20253 785 271 aa, chain + ## HITS:1 COG:STM3871 KEGG:ns NR:ns ## COG: STM3871 COG0356 # Protein_GI_number: 16767155 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Salmonella typhimurium LT2 # 1 271 1 271 271 464 95.0 1e-131 MASENMTPQDYIGHHLNNFQLDLRTFSLVDPHNPPATFWTINIDSMFFSVVLGLLFLVLF RSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDL LPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTL QPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVP WAIFHILIITLQAFIFMVLTIVYLSMASEEH >gi|296918659|gb|GG773041.1| GENE 19 20300 - 20539 378 79 aa, chain + ## HITS:1 COG:BU003 KEGG:ns NR:ns ## COG: BU003 COG0636 # Protein_GI_number: 15616633 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Buchnera sp. APS # 1 79 1 79 79 97 83.0 5e-21 MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLV DAIPMIAVGLGLYVMFAVA >gi|296918659|gb|GG773041.1| GENE 20 20601 - 21071 592 156 aa, chain + ## HITS:1 COG:ECs4678 KEGG:ns NR:ns ## COG: ECs4678 COG0711 # Protein_GI_number: 15833932 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 201 100.0 5e-52 MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGLASAERAHKDLDLAKAS ATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREEL RKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL >gi|296918659|gb|GG773041.1| GENE 21 21086 - 21619 585 177 aa, chain + ## HITS:1 COG:ECs4677 KEGG:ns NR:ns ## COG: ECs4677 COG0712 # Protein_GI_number: 15833931 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Escherichia coli O157:H7 # 1 177 1 177 177 299 99.0 2e-81 MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAES FIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQ QLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGGMVIDGSVRGRLERLADVLQS >gi|296918659|gb|GG773041.1| GENE 22 21632 - 23173 1715 513 aa, chain + ## HITS:1 COG:ECs4676 KEGG:ns NR:ns ## COG: ECs4676 COG0056 # Protein_GI_number: 15833930 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 986 100.0 0 MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLPGNRY AIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGP LDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAI DAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPY AGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLER AARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLF NAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQ LDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHA PLMQEINQTGGYNDEIEGKLKGILDSFKATQSW >gi|296918659|gb|GG773041.1| GENE 23 23250 - 24113 1002 287 aa, chain + ## HITS:1 COG:ECs4675 KEGG:ns NR:ns ## COG: ECs4675 COG0224 # Protein_GI_number: 15833929 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 555 100.0 1e-158 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGN LEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGS KGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMS QVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV >gi|296918659|gb|GG773041.1| GENE 24 24140 - 25522 1713 460 aa, chain + ## HITS:1 COG:ECs4674 KEGG:ns NR:ns ## COG: ECs4674 COG0055 # Protein_GI_number: 15833928 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Escherichia coli O157:H7 # 1 460 1 460 460 890 100.0 0 MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSS DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEEL SNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV GERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVP ADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARG VQSILQRYQELKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFFVAEVFTGSPGKYVS LKDTIRGFKGIMEGEYDHLPEQAFYMVGSIEEAVEKAKKL >gi|296918659|gb|GG773041.1| GENE 25 25549 - 25962 457 137 aa, chain + ## HITS:1 COG:atpC KEGG:ns NR:ns ## COG: atpC COG0355 # Protein_GI_number: 16131599 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Escherichia coli K12 # 1 137 3 139 139 243 100.0 8e-65 MTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEF IYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAEL AKAIAQLRVIELTKKAM >gi|296918659|gb|GG773041.1| GENE 26 26316 - 27686 1637 456 aa, chain + ## HITS:1 COG:ECs4672 KEGG:ns NR:ns ## COG: ECs4672 COG1207 # Protein_GI_number: 15833926 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 889 99.0 0 MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGD LLKQALKDDNLNWVLQTEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDA KPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADM KRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQ SEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKN SVIGDDCEISPYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSK AGHLTYLGDAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGAT IAAGTTVTRNVGENALAISRVPQTQKEGWRRPVKKK >gi|296918659|gb|GG773041.1| GENE 27 27847 - 29676 2378 609 aa, chain + ## HITS:1 COG:glmS KEGG:ns NR:ns ## COG: glmS COG0449 # Protein_GI_number: 16131597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Escherichia coli K12 # 1 609 1 609 609 1194 99.0 0 MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAE EHPLHGGTGIAHTRWATHGEPSEANAHPHVSEHIVVVHNGIIENHEPLREELKARGYTFV SETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLV IGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQ YDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILA CGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGL RLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKL SRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIA LEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRAR GGQLYVFADQDAGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPR NLAKSVTVE >gi|296918659|gb|GG773041.1| GENE 28 29990 - 31030 1189 346 aa, chain + ## HITS:1 COG:pstS KEGG:ns NR:ns ## COG: pstS COG0226 # Protein_GI_number: 16131596 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 346 1 346 346 632 100.0 0 MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKWADTYQKETGNKVNYQG IGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIGGVVLAVNIPGLKSGELVL DGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYLAKVNEE WKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGK PVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWPITSTTFILIHKDQKKPEQGTEVLK FFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWKTNIKDSSGKPLY >gi|296918659|gb|GG773041.1| GENE 29 31117 - 32076 1249 319 aa, chain + ## HITS:1 COG:ECs4663 KEGG:ns NR:ns ## COG: ECs4663 COG0573 # Protein_GI_number: 15833917 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 319 1 319 319 535 100.0 1e-152 MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTK EWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLA AIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIM IIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALG ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFI VLAASKFMIMRLAKNEGAR >gi|296918659|gb|GG773041.1| GENE 30 32076 - 32966 1140 296 aa, chain + ## HITS:1 COG:ECs4662 KEGG:ns NR:ns ## COG: ECs4662 COG0581 # Protein_GI_number: 15833916 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 506 99.0 1e-143 MAMVEMQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFWLIWILMSTITRGIDGM SLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWLAEV IRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIALALLQVPIVIRTTENMLKLVP DSLREAAYALGTPKWKMIAAITLKASVSGIMTGILLAIARIAGETAPLLFTALSNQFWST DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLCVLLLNILARVVFAKNKHG >gi|296918659|gb|GG773041.1| GENE 31 33057 - 33830 345 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 11 252 2 239 245 137 36 4e-31 MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMF ELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEK LSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEP CSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLF TKPAKKQTEDYITGRYG >gi|296918659|gb|GG773041.1| GENE 32 33845 - 34570 881 241 aa, chain + ## HITS:1 COG:phoU KEGG:ns NR:ns ## COG: phoU COG0704 # Protein_GI_number: 16131592 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Escherichia coli K12 # 1 241 1 241 241 444 99.0 1e-125 MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMHNQDSDLAKRVIEGDKN VNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERIGDVADKICRTALEKFSQQ HQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYREDKKVDQEYEGIVRQLMTYMM EDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVKGQDFRHVGGDELDKLLAEKDSD K >gi|296918659|gb|GG773041.1| GENE 33 34856 - 35692 564 278 aa, chain + ## HITS:1 COG:bglG KEGG:ns NR:ns ## COG: bglG COG3711 # Protein_GI_number: 16131591 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli K12 # 1 278 1 278 278 522 99.0 1e-148 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRPGERINSSGIEKEYALSSHELNGR LSELLSHMPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH >gi|296918659|gb|GG773041.1| GENE 34 35826 - 37700 1281 624 aa, chain + ## HITS:1 COG:bglF_2 KEGG:ns NR:ns ## COG: bglF_2 COG1263 # Protein_GI_number: 16131590 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 91 451 1 361 361 664 96.0 0 MTELARTIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQ VVIGNHVADVFLAVNSVAGLGEKAQQAPENDDKDNLLNRFFYVISGIFTPLIGLMAATGI LKGMLALALTFQWATEQSGTYLILFSASDALFWFFPIILGYTAGKRFSGNPFTAMVIGGA LVHPLILTAFENGQKVDALGLDFLGIPVTLLNYSSSVIPIIFSAWLCSILERRLNTWLPS AIKNFFTPLLCLMVITPITFLLVGPLSTWISELIAAGYLWLYQAVPAFAGAVMGGFWQIF VMFGLHWGLIPLIINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCERDAQKKVVAGSAA LTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFGLPGIFTFMQTIP STGIDFTVWASVIGGVIAIGCAFVGTVMFHFITAKRQPAQVAQQEKTPEVITPEQGGICS PMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGQIASLFATLHAIGIESDDG VEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIREAGFDLTTPVLISNSD DFTDVLPHGTAQINAGEPLLSIIR >gi|296918659|gb|GG773041.1| GENE 35 37719 - 39113 1237 464 aa, chain + ## HITS:1 COG:bglB KEGG:ns NR:ns ## COG: bglB COG2723 # Protein_GI_number: 16131589 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 464 1 464 470 977 98.0 0 MKAFPETFLWGGATAANQVEGAWQEDGKGITTSDLQPHGVMGKMEPRILGKENIKDVAID FYHRYPEDIALFAEMGFTCLRISIAWARIFPQGDEAEPNEAGLAFYERLFDEMAQAGIKP LVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAP FTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLIPEAKIGNMLLGGLVYPLTCQPQD MLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYY MTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRILLNTLWDRYQKPLFIV ENGLGAKDSVEVDGSIQDDYRIAYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQ MSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIKTRGLSLKK >gi|296918659|gb|GG773041.1| GENE 36 39199 - 40815 1454 538 aa, chain + ## HITS:1 COG:yieC KEGG:ns NR:ns ## COG: yieC COG4580 # Protein_GI_number: 16131588 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli K12 # 1 538 1 538 538 1004 98.0 0 MFRRNIITSAILLMAPLAFSAQSLAESLTVEQRLELLEKALRETQSELKKYKDEEKKKYT PATVNRSVSTNDQGYAANSFPTSRAAKPDAVLVKNEEKNASETGSIYSSMTLKDFSKFVK DEIGFSYNGYYRSGWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNENGKRVDA IVMMDGNVGQQYSTGWFGDNAGGENFMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEI QMLDWKTQRTDAAAGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTNTIDLRYK DIPLWDKVTLMVSGRYVTANESASEKDNQDNNGYYDWKDTWMFGTSLTQKFDKGGFNEFS FLVANNSIASNFGRYAGASPFTTFNGRYYGYHTGGTAVRLTSQGEAYIGDHFIVANAIVY SFGNDIYSYETGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGY KTTLFHTFKVNTSMLTSRPEIRFYATYIKALENELDGFTFEDNKDDQFAVGAQAEIWW >gi|296918659|gb|GG773041.1| GENE 37 40947 - 42041 900 364 aa, chain + ## HITS:1 COG:yieL KEGG:ns NR:ns ## COG: yieL COG2382 # Protein_GI_number: 16131587 # Func_class: P Inorganic ion transport and metabolism # Function: Enterochelin esterase and related enzymes # Organism: Escherichia coli K12 # 1 364 37 400 400 709 97.0 0 MPASPAPTIPVKQYVTQVNADNSVTFRYFAPGAKNVSVVVGVPVPDNIHPMTKDEAGVWS WRTPVLKGNLYEYFFNVDGVRSIDTGTAMTKPQRQVNSSMILVPGSYLDTRSVAHGDLIT ITYHSSALQSERQMYVWTPPGYSGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLA EGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVFYPLNAKAADRELMNDIIPLISKRFN VRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFSGVTTTTVPDEGVAARLNEPAAI NQQLRNFTVVVGDKDVVTGKDIVGLKTELEQKKIKFDYQEYPGLNHEMDVWRPAYAAFVQ KLFK >gi|296918659|gb|GG773041.1| GENE 38 42056 - 42778 777 240 aa, chain + ## HITS:1 COG:yieK KEGG:ns NR:ns ## COG: yieK COG0363 # Protein_GI_number: 16131586 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli K12 # 24 232 1 209 213 430 99.0 1e-120 MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLITLVKGKPWYDNC YFYNFDEIPFRGKEGEGVTITNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLD LVVLGLGVDGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVAHGELGGDFSLVPDSYVTMGP KSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALG >gi|296918659|gb|GG773041.1| GENE 39 42860 - 43333 168 157 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4139 NR:ns ## KEGG: ECS88_4139 # Name: yieI # Def: inner membrane protein # Organism: E.coli_S88 # Pathway: not_defined # 1 157 1 157 157 254 100.0 1e-66 MSVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLILLVIIQVLPLFLLMSITTGAIP AMLTGVMVACLPEKIGSQKRYRCLVGGIGGVVITEIYCAVIVHIKDMASSALFENILSGE NLVVRIIPALLAGVVMSRIITHLPGLDISCPETDSLS >gi|296918659|gb|GG773041.1| GENE 40 43400 - 43780 324 126 aa, chain - ## HITS:1 COG:ECs4652 KEGG:ns NR:ns ## COG: ECs4652 COG0637 # Protein_GI_number: 15833906 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 125 96 220 221 268 96.0 2e-72 MLASINVPMCVVSNGPVSKMQHSLGKLNMLHYFPEKLFSGYDIQRWKPDPALMFHAAKAM NVNVENCILVDDSSAGAQSGIDAGMEVFYFCADPHNKPIVHPKVTTFTHLSQLPELWKAR GWDITA >gi|296918659|gb|GG773041.1| GENE 41 43862 - 44065 302 67 aa, chain - ## HITS:1 COG:ECs4652 KEGG:ns NR:ns ## COG: ECs4652 COG0637 # Protein_GI_number: 15833906 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 67 1 67 221 137 98.0 4e-33 MSQIEAVFFDCDGTLVDSEVICSRAYVTMFREFGIHVDLEEIFTRFKGVKLYEIIDIISK EQGVTMV >gi|296918659|gb|GG773041.1| GENE 42 44232 - 45569 1721 445 aa, chain + ## HITS:1 COG:STM3851 KEGG:ns NR:ns ## COG: STM3851 COG2252 # Protein_GI_number: 16767135 # Func_class: R General function prediction only # Function: Permeases # Organism: Salmonella typhimurium LT2 # 1 445 43 487 487 736 96.0 0 MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDT SAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVVVQAMGLPWQVGMGAIFWG AIGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGLKNAGVIVANPETLVSIGNL TSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSI SSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAG ALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSITEGIALGFISYCVMKIGTGR LRDLSPCVIIVALLFILKIVFIDAH >gi|296918659|gb|GG773041.1| GENE 43 45650 - 46216 737 188 aa, chain - ## HITS:1 COG:ECs4650 KEGG:ns NR:ns ## COG: ECs4650 COG0431 # Protein_GI_number: 15833904 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 361 98.0 1e-100 MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEINALPSIADIPLYDADVQQEDGFP ATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGV IGGARCQYHLRQILVFLDTMVMNKPEFMGGVIQNKVDPQTGEVIDQGTLDHLTGQLTAFG EFIQRVKI >gi|296918659|gb|GG773041.1| GENE 44 46238 - 46999 495 253 aa, chain - ## HITS:1 COG:yieE KEGG:ns NR:ns ## COG: yieE COG2091 # Protein_GI_number: 16131580 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Escherichia coli K12 # 1 253 1 253 253 514 99.0 1e-146 MERKMATHFARGILTEGHLISVRLPSLCHQEARNIPPHRQSRFLASRGLLAELMFMLYGI GELPEIVTLPKGKPVFSDKNLPSFSVSYAGNMVGVALTTEGECGLDMELQRATRGFHSPH APDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLNDDPRDLQLLPIAGRLK CAHVNHVEALCDAEDVLVWSVAVTPTIEKLSVWELDGKHGWKSLPDIHSRANNPTSRMMR FAQLSTVKAFSPN >gi|296918659|gb|GG773041.1| GENE 45 47144 - 48103 760 319 aa, chain - ## HITS:1 COG:yidZ KEGG:ns NR:ns ## COG: yidZ COG0583 # Protein_GI_number: 16131579 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 319 1 319 319 572 97.0 1e-163 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPL GLSPTPLMVSMEQNLAEWMQMSNQLLDKPLHETPRGLKFELAAESPLMMIMLNALSKRIY QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP CVWLRKDHPALHEAWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSR NPKIVWLRETIKNLYASMA >gi|296918659|gb|GG773041.1| GENE 46 48078 - 49253 883 391 aa, chain - ## HITS:1 COG:yidY KEGG:ns NR:ns ## COG: yidY COG0477 # Protein_GI_number: 16131578 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 391 1 391 391 655 98.0 0 MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGK VADRSGRKPVAIPGAALFIIASVFCSLAETSALFLAGRFLQGLGAGCCYVVAFAILRDTL DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWTMATMGIALLMLSLFILKE TRPAAPTTSDKPRENSESLLNRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGEY ATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQVLFLAAGITLAVSPSHAVSLFGITL ICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVVGIGAWNMLIGI LIACSIVSLLLIMFVAPGRPVAAHEEIHHHA >gi|296918659|gb|GG773041.1| GENE 47 49385 - 50632 862 415 aa, chain - ## HITS:1 COG:tnaB KEGG:ns NR:ns ## COG: tnaB COG0814 # Protein_GI_number: 16131577 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli K12 # 1 415 1 415 415 728 98.0 0 MTDQSEKKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAFILIIAWFSMLHSGLLL LEANLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTYAYISANGAIISETISMNL GYHANPRIVGICTAIFVASVLWISSLAASRITSLFLGLKIISFVIVFGSFFFQVDYSILR DSTSTTAGTSYFPYIFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGSLLALVI YLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLGTKQHGIIEFCLLVFSNLAVASSFF GVTLGLFDYLADLFKIDNSHAGRFKTVLLTFLPPALLYLIFPNGFIYGIGGAGLCATIWA VIIPAVLAIKARKKFPNQMFTVWGGNLIPAIVILFGITVILCWFGNVFNVLPKFG >gi|296918659|gb|GG773041.1| GENE 48 50724 - 52139 2014 471 aa, chain - ## HITS:1 COG:tnaA KEGG:ns NR:ns ## COG: tnaA COG3033 # Protein_GI_number: 16131576 # Func_class: E Amino acid transport and metabolism # Function: Tryptophanase # Organism: Escherichia coli K12 # 1 471 6 476 476 973 100.0 0 MENFKHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVT QSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQE KGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGI EEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQ REAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVV QEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAA FVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRL TIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV >gi|296918659|gb|GG773041.1| GENE 49 52720 - 54084 1580 454 aa, chain - ## HITS:1 COG:thdF KEGG:ns NR:ns ## COG: thdF COG0486 # Protein_GI_number: 16131574 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 1 454 1 454 454 858 99.0 0 MSDNDTIVAQATPPGRGGVGILRISGLKAREVAETVLGKLPKPRYADYLPFKDADGSVLD QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE IDFLSDGKIEAQLNNVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK >gi|296918659|gb|GG773041.1| GENE 50 54201 - 55847 1855 548 aa, chain - ## HITS:1 COG:ECs4640 KEGG:ns NR:ns ## COG: ECs4640 COG0706 # Protein_GI_number: 15833894 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Escherichia coli O157:H7 # 1 548 1 548 548 1064 100.0 0 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKL ISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQFIYQAQSGLTGRDGP DNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNV QNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIAD NENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAAIGYKSQPVLVQPGQT GAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIII ITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPL GGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYILPILMGVTMFFIQK MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGL HSREKKKS >gi|296918659|gb|GG773041.1| GENE 51 56071 - 56397 246 108 aa, chain - ## HITS:1 COG:rnpA KEGG:ns NR:ns ## COG: rnpA COG0594 # Protein_GI_number: 16131572 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Escherichia coli K12 # 1 108 12 119 119 190 99.0 5e-49 MLTPSQFTFVFQQPQRAGTPQITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRE SFRLRQHELPAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS >gi|296918659|gb|GG773041.1| GENE 52 56447 - 56587 228 46 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15804297|ref|NP_290336.1| 50S ribosomal protein L34 [Escherichia coli O157:H7 EDL933] # 1 46 1 46 46 92 100 2e-17 MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK >gi|296918659|gb|GG773041.1| GENE 53 57278 - 58597 1212 439 aa, chain + ## HITS:1 COG:dnaA KEGG:ns NR:ns ## COG: dnaA COG0593 # Protein_GI_number: 16131570 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Escherichia coli K12 # 1 439 29 467 467 870 99.0 0 MQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQ AAVTSNVAAPAQVAQTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQ LARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQ DMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTS DRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKR LRSNVRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYK IKVADLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLR EESHDIKEDFSNLIRTLSS >gi|296918659|gb|GG773041.1| GENE 54 58602 - 59702 1227 366 aa, chain + ## HITS:1 COG:ECs4636 KEGG:ns NR:ns ## COG: ECs4636 COG0592 # Protein_GI_number: 15833890 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 729 100.0 0 MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLD DWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC SMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGR FPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQE EAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYV VMPMRL >gi|296918659|gb|GG773041.1| GENE 55 59702 - 60775 822 357 aa, chain + ## HITS:1 COG:ECs4635 KEGG:ns NR:ns ## COG: ECs4635 COG1195 # Protein_GI_number: 15833889 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 357 1 357 357 712 100.0 0 MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV IRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE GFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRPWDKE LIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFER DRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL IDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD >gi|296918659|gb|GG773041.1| GENE 56 60804 - 63218 3045 804 aa, chain + ## HITS:1 COG:ECs4634 KEGG:ns NR:ns ## COG: ECs4634 COG0187 # Protein_GI_number: 15833888 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Escherichia coli O157:H7 # 1 804 1 804 804 1587 99.0 0 MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEII VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV SVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVT EFEYDILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY LLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG KQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERR YPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLF EPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFE QALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTL MGDAVEPRRAFIEENALKAANIDI >gi|296918659|gb|GG773041.1| GENE 57 63484 - 63882 456 132 aa, chain + ## HITS:1 COG:ECs4633 KEGG:ns NR:ns ## COG: ECs4633 COG3753 # Protein_GI_number: 15833887 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 132 4 135 135 211 95.0 3e-55 MGLFDDVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQSNQS VSGEQVESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVSPQAHNDLLS AGMELLKGKLFR >gi|296918659|gb|GG773041.1| GENE 58 63997 - 64809 1183 270 aa, chain + ## HITS:1 COG:yidA KEGG:ns NR:ns ## COG: yidA COG0561 # Protein_GI_number: 16131565 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 270 1 270 270 525 100.0 1e-149 MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME QPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANR DISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTV LKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAMDNA IPSVKEVANFVTKSNLEDGVAFAIEKYVLN >gi|296918659|gb|GG773041.1| GENE 59 64866 - 65522 330 218 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4119 NR:ns ## KEGG: ECS88_4119 # Name: yidX # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 218 7 224 224 453 100.0 1e-126 MKLNLKGFFKAASLCSLAFALTGCITWGLVSNTASRPHAEQWRSDTIKGLSLAEDSNGTK GYVFVGESLDYLLTTGGDEVVKMLNDPAIHGERITVSDNAKFILSSSNKNFSGAITLYYD WNNEEDKALATQYGFICDTRRCTWMLDGLKGSIHQKNKKADYSNVMVFHQPFTVGFYEYK ATDGVPHGLVNALLPVTLTLDIVTSPLQFLILCTTRNC >gi|296918659|gb|GG773041.1| GENE 60 65801 - 66490 692 229 aa, chain + ## HITS:1 COG:STM3830 KEGG:ns NR:ns ## COG: STM3830 COG2186 # Protein_GI_number: 16767115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 409 94.0 1e-114 MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFRSLMAKRLIEM KRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVRNLVEPAIARWAAERATSS DLAQIESALNEMIANNQDREAFNEADIRYHEAVLQSVHNPVLQQLSIAISSLQRAVFERT WMGDEANMPQTLQEHKALFDAIRHQDGDAAEQAALTMIASSTRRLKEIT >gi|296918659|gb|GG773041.1| GENE 61 66487 - 67365 498 292 aa, chain + ## HITS:1 COG:dgoK KEGG:ns NR:ns ## COG: dgoK COG3734 # Protein_GI_number: 16131561 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Escherichia coli K12 # 1 292 1 292 292 534 95.0 1e-152 MTARYIAIDWGSTNLRAWLYQGDHCLDSRQSEAGVTRLNGKSPAAVLAEVTTDWREENTP VVMAGMVGSNVGWKVAPYLSVPARFSSIGEQLTSAGDNIWIIPGLCVSHDDNHNVMRGEE TQLIGARTLAPSSLYVMPGTHCKWVQADSQQINDFRTVMTGELHHLLLNHSLIGAGLPPQ ENAADAFAAGLERGLNAPDILPQLFEVRASHVLGTLPREQVSEFLSGLLIGAEVASMRDY VTHQQVITLVAGTSLTVRYQQAFQAMGCDVTAVAGDTAFQAGIRSIAHAVAN >gi|296918659|gb|GG773041.1| GENE 62 67349 - 67966 646 205 aa, chain + ## HITS:1 COG:RSc2752 KEGG:ns NR:ns ## COG: RSc2752 COG0800 # Protein_GI_number: 17547471 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Ralstonia solanacearum # 1 201 3 203 213 239 63.0 3e-63 MQWQTKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKA LIGAGTVLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEA GAQALKIFPSSAFGPQYIKALKAVLPPDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLY RAGQSVERTAQQAAAFVKAYREAVQ >gi|296918659|gb|GG773041.1| GENE 63 67963 - 69111 1538 382 aa, chain + ## HITS:1 COG:dgoA_2 KEGG:ns NR:ns ## COG: dgoA_2 COG4948 # Protein_GI_number: 16131560 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 382 96 477 477 798 99.0 0 MKITKITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHELSDYLIGQDPSRI NDLWQVMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWV GGDRPADVIDGIKTLREIGFDTFKLNGCEELGLIDNSRAVDAAVNTVAQIREAFGNQIEF GLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPKLAAQTHIPLAAGERMFSR FDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHID FVSYNAVLQEQSMGIHYNKGAELLDFVKNKEDFSMVGGFFKPLTKPGLGVEIDEAKVIEF SKNAPDWRNPLWRHEDNSVAEW >gi|296918659|gb|GG773041.1| GENE 64 69231 - 70523 1425 430 aa, chain + ## HITS:1 COG:dgoT KEGG:ns NR:ns ## COG: dgoT COG0477 # Protein_GI_number: 16131559 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 430 16 445 445 799 99.0 0 MDIPVNAAKPGRRRYLTLVMIFITVVICYVDRANLAVASAHIQEEFGITKAQMGYVFSAF AWLYTLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFATGLMSLIGLRAITGIFEAP AFPTNNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIG IIWSLIWFKVYQPPRLTKGISKAELDYIRDGGGLVDGDAPVKKEARQPLTAKDWKLVFHR KLIGVYLGQFAVASTLWFFLTWFPNYLTQEKGITALKAGFMTTVPFLAAFIGVLLSGWVA DLLVRKGFSLGFARKTPIICGLLISTCIMGANYTNDPMMIMCLMALAFFGNGFASITWSL VSSLAPMRLIGLTGGVFNFAGGLGGITVPLVVGYLAQGYGFAPALVYISAVALIGALSYI LLVGDVKRVG >gi|296918659|gb|GG773041.1| GENE 65 70484 - 71584 516 366 aa, chain - ## HITS:1 COG:ECs4630 KEGG:ns NR:ns ## COG: ECs4630 COG0644 # Protein_GI_number: 15833884 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli O157:H7 # 1 354 8 361 361 734 98.0 0 MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIR DGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHD SLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRHLYPDHQIRKYVAIQQW FAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRSVL LKLPEKLNTAYWRATRKLRLKLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKDYPTRFT SPTSRM >gi|296918659|gb|GG773041.1| GENE 66 71685 - 72899 762 404 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C4240 NR:ns ## KEGG: UTI89_C4240 # Name: yidR # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 404 13 416 416 823 100.0 0 MKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQ GAYVGVVTVHPKSEKYVFIHGPENPDETWYYDFHHRRGVIVESGKVSNLDAMDITAPYTP GALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYS GSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPK DEAGWKAAGDVPLSGTETTLPAPPRGVVQRRLTFTHHRIYPGLVNIPRHWVRCNPQGTQI AFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQ SGEVEYLTENHANPPSADAVVFSPDGQWLAWMEDGQLWITETDR >gi|296918659|gb|GG773041.1| GENE 67 72903 - 73166 223 87 aa, chain - ## HITS:1 COG:ECs4628 KEGG:ns NR:ns ## COG: ECs4628 COG5645 # Protein_GI_number: 15833882 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 87 49 135 135 159 91.0 9e-40 MMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVLDTILLPWDVFRKDSS VRSRVEKSEANAQETNNVIPPAKMPAN >gi|296918659|gb|GG773041.1| GENE 68 73541 - 73954 616 137 aa, chain + ## HITS:1 COG:ECs4627 KEGG:ns NR:ns ## COG: ECs4627 COG0071 # Protein_GI_number: 15833881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 256 100.0 7e-69 MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDENHYRIAIAVAGFAESE LEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRGANLVNGLLYID LERVIPEAKKPRRIEIN >gi|296918659|gb|GG773041.1| GENE 69 74066 - 74494 514 142 aa, chain + ## HITS:1 COG:ECs4626 KEGG:ns NR:ns ## COG: ECs4626 COG0071 # Protein_GI_number: 15833880 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Escherichia coli O157:H7 # 1 142 3 144 144 275 100.0 2e-74 MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNHYRITLALAGFRQEDLE IQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAENMEVSGATFVNGLLHIDLI RNEPEPIAAQRIAISERPALNS >gi|296918659|gb|GG773041.1| GENE 70 74691 - 76352 1840 553 aa, chain + ## HITS:1 COG:ECs4625 KEGG:ns NR:ns ## COG: ECs4625 COG2985 # Protein_GI_number: 15833879 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 553 9 561 561 968 97.0 0 MSDIALTVSILALVAVVGLFIGNVKFRGVGLGIGGVLFGGIIVGHFVSQAGMTLSSDMLH VIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVIIGGLVTAILHKLFDIPLP VVLGIFSGAVTNTPALGAGQQILRDLGTPMAMVDQMGMSYAMAYPFGICGILFTMWMLRV IFRVNVETEAQQHESTRTNGGALIRTINIRVENPNLHNLAIKDVPILNGDKVICSRLKRE ETLKVPSPETVIQLGDLLHLVGQPADLHNAQLVIGQEVDTSLSTKGTDLRVARVVVTNEN VLGKRIRDLHFKERYDVVISRLNRAGVELVASSDISLQFGDILNLVGRPSAIDAVANVLG NAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVPGFPAALKLGLAGGPLIMALILGRIGSIG KLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFIHTLVDGEGLSWIGYGALITAVPLIT VGILARMLAKMNYLTMCGMLAGSMTDPPALAFANNLHPTSGAAALSYATVYPLVMFLRII TPQLLAVLFWSIG >gi|296918659|gb|GG773041.1| GENE 71 76442 - 77308 491 288 aa, chain - ## HITS:1 COG:yidL KEGG:ns NR:ns ## COG: yidL COG2207 # Protein_GI_number: 16131550 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 288 11 298 307 589 97.0 1e-168 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN SWVAVYTVQGCGKILLKNDEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM DIPVGQQSVIYNGEVYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMHTVGKKD PQRRQIEKLIATLHANLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDR >gi|296918659|gb|GG773041.1| GENE 72 77475 - 79190 1763 571 aa, chain + ## HITS:1 COG:yidK KEGG:ns NR:ns ## COG: yidK COG4146 # Protein_GI_number: 16131549 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Escherichia coli K12 # 1 571 1 571 571 1043 98.0 0 MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQ LVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRII IDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQLSDGAAIWLLVILLGLAGILYAVI GGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSVGGPTD PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPG LIAFHLYQDLPKADMAYPTLVNNVLPVPLVGFFGAVLCGAVISTFNGFLNSASTLFSMGI YRRIINQNAEPQQLVTVGRKFGFFIAVVSVMVAPWIANAPQGLYSWMKQLNGIYNVPLVT IIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFI AAVVIVYLIFDSWRHRHDPAVTFTPDAKDSL >gi|296918659|gb|GG773041.1| GENE 73 79187 - 80251 769 354 aa, chain + ## HITS:1 COG:yidJ KEGG:ns NR:ns ## COG: yidJ COG3119 # Protein_GI_number: 16131548 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Escherichia coli K12 # 1 350 1 350 497 742 98.0 0 MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLF TGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDA DYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARA DEPFLMVISYDEPHHPFTCPVEYLEKYTDFYYELGEKAEDDLANKPEHHRLWAQAMPSPV GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAA MYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGEISLP >gi|296918659|gb|GG773041.1| GENE 74 80266 - 80679 337 137 aa, chain + ## HITS:1 COG:ECs4619 KEGG:ns NR:ns ## COG: ECs4619 COG3119 # Protein_GI_number: 15833873 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Escherichia coli O157:H7 # 1 137 361 497 497 283 97.0 6e-77 MLVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIHF ADVRSKMHDALLDYMDKIRDPFRSYQWNLRPWRKDAQPRWMGAFRPRPQDGYSPVVRDYD TGLPTQGVKVEEKKQKF >gi|296918659|gb|GG773041.1| GENE 75 80739 - 81086 423 115 aa, chain + ## HITS:1 COG:ECs4617 KEGG:ns NR:ns ## COG: ECs4617 COG2149 # Protein_GI_number: 15833871 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 115 1 115 115 190 100.0 7e-49 MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPVIRELLALLLC LFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG >gi|296918659|gb|GG773041.1| GENE 76 81076 - 81438 213 120 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4100 NR:ns ## KEGG: ECS88_4100 # Name: yidG # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 120 1 120 120 217 99.0 1e-55 MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAVKHNWHQAGMLFWISIGILAIV ALILWHYTRNRNLMDVTNSYFSQFHVVRDKFLISLAVLSLAILFAVTHIHQLIVFIERVA >gi|296918659|gb|GG773041.1| GENE 77 81435 - 81932 397 165 aa, chain + ## HITS:1 COG:ECs4615 KEGG:ns NR:ns ## COG: ECs4615 COG0641 # Protein_GI_number: 15833869 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli O157:H7 # 1 165 1 165 165 324 93.0 5e-89 MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQLGIRSVQLIPHLEFDDRGDLTAASV TAELWGKFLIALFECWVRADISRISIELFDTTLQKWCGSEKSQPRRDCQACDWHRLCPHA REDKPDNVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMELMTMLR >gi|296918659|gb|GG773041.1| GENE 78 81940 - 83091 1200 383 aa, chain - ## HITS:1 COG:ECs4614 KEGG:ns NR:ns ## COG: ECs4614 COG0477 # Protein_GI_number: 15833868 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 9 383 22 396 396 616 99.0 1e-176 MLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVG RRPVILVGMSIFMLATLVAVTTSSLMVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLR HANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDA PRTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFIL PIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGVMNVWTLLIPAALFFF GAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTL MGLLIVLCWLPLATRMSHQGQPV >gi|296918659|gb|GG773041.1| GENE 79 83729 - 85417 1922 562 aa, chain + ## HITS:1 COG:ECs4612 KEGG:ns NR:ns ## COG: ECs4612 COG0028 # Protein_GI_number: 15833866 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 562 1 562 562 1098 98.0 0 MASSGTTSTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYDALSQSTQIRHILARHE QGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDSIPLICITGQVPASMIGTD AFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQSGRPGPVWIDIPKDVQTAVFE IETQPAMAEKAAAPAFSEESIRDAAAMINAAKHPVLYLGGGVINAPARVRELAEKAQLPT TMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEADLLIVLGARFDDRAIGKTEQFCPN AKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQLIPLVEAQPRAEWHQLVADLQREFPCP IPKACDPLSHYGLINAVAACVDDNAIITTDVGQHQMWTAQAYPLNRPRQWLTSGGLGTMG FGLPAAIGAALANPDRKVLCFSGDGSLMMNIQEMATASENQLDVKIILMNNEALGLVHQQ QSLFYKQGVFAATYPGKINFMQIAAGFGLETCDLNNEADPQAALQEIINRPGPALIHVRI DAEEKVYPMVPPGAANTEMVGE >gi|296918659|gb|GG773041.1| GENE 80 85421 - 85711 394 96 aa, chain + ## HITS:1 COG:ECs4611 KEGG:ns NR:ns ## COG: ECs4611 COG0440 # Protein_GI_number: 15833865 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 184 100.0 3e-47 MQNTTHDNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQDSDKSHIWLLVNDDQ RLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ >gi|296918659|gb|GG773041.1| GENE 81 85784 - 86374 744 196 aa, chain + ## HITS:1 COG:ECs4606 KEGG:ns NR:ns ## COG: ECs4606 COG2197 # Protein_GI_number: 15833860 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 372 99.0 1e-103 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGCGVQVCICDISMPDI SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL GVSNDVELARRMFDGW >gi|296918659|gb|GG773041.1| GENE 82 86485 - 87876 1160 463 aa, chain + ## HITS:1 COG:uhpB KEGG:ns NR:ns ## COG: uhpB COG3851 # Protein_GI_number: 16131538 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, glucose-6-phosphate specific # Organism: Escherichia coli K12 # 1 463 39 501 501 761 98.0 0 MAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLMQAVGLTHFSLLMIGSLLTLLPV ALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLV FWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLAL PIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLR ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP PDSGQHGFGLTGMRERVTALGGTLTISCLHGTRVSVSLPQRYV >gi|296918659|gb|GG773041.1| GENE 83 87886 - 89205 1235 439 aa, chain + ## HITS:1 COG:ECs4604 KEGG:ns NR:ns ## COG: ECs4604 COG2271 # Protein_GI_number: 15833858 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli O157:H7 # 1 439 2 440 440 809 99.0 0 MLPFLKAPADAPLMTDKHEIDARYRYWRRHILLTIWLGYALFYFTRKSFNAAVPEILANG VLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSTSLWA FAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWNTAHNVGGALIPIVMAASALH YGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVGEWRHDALEIAQQQEGAGLTRKE ILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLYMSEMLGVDLVTANTAVTMFELGGF IGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQATCFFTIGFFVFG PQMLIGMAAAECSHKEAAGAATGFVGLFAYLGASLAGWPLAKVLDTWHWSGFFVVIAIAA GISALLLLPFLNAQTPREA >gi|296918659|gb|GG773041.1| GENE 84 89343 - 90734 1742 463 aa, chain + ## HITS:1 COG:ECs4603 KEGG:ns NR:ns ## COG: ECs4603 COG2271 # Protein_GI_number: 15833857 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 845 100.0 0 MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTY GLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGS VSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTFLGFWNISHNLGGAGAAGVAL FGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKET ESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRIGIDQWSTVYAFQELKLSKAVAIQG FTLFEAGALVGTLLWGWLSDLANGRRGLVACIALALIIATLGVYQHASNEYIYLASLFAL GFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGDSFAKLGLGMIADGTPVFGLT GWAGTFAALDIAAIGCICLMAIVAVMEERKIRREKKIQQLTVA >gi|296918659|gb|GG773041.1| GENE 85 90798 - 92564 1520 588 aa, chain - ## HITS:1 COG:yicP KEGG:ns NR:ns ## COG: yicP COG1001 # Protein_GI_number: 16131535 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Escherichia coli K12 # 1 588 1 588 588 1186 98.0 0 MNNSINHKFHHISRTEYQELLAVSRGDAVADYIIDNVSILDLINGGEISGPIVIKGRYIA GVGAEYADAPALQRIDARGATAVPGFIDAHLHIESSMMTPVTFETATLPRGLTTVICDPH EIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQV TGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGLGGKELNAYIAAGIENCHESYQL EEGRRKLQLGMSLMIREGSAARNLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHIDAL IRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGLLAPGKQADIVLLSDARKVTVQQVLVK GEPIDAQTLQAEESARLAQSAPPYGNTIDRQPVSASDFALQFTPGKRYRVIEVIHNELIT HSRSSVYSENGFDRDDVCFIAVLERYGQRLAPACGLLGGFGLNEGALAATVSHDSHNIVV IGRSAEEMALAVNQVIQDGGGLCVVRNGQVQSHLPLPIAGLMSTDTAQSLAEQIDALKAA ARECGPLPDEPFIQMAFLSLPVIPALKLTSQGLFDGEKFAFTTLEFTE >gi|296918659|gb|GG773041.1| GENE 86 92727 - 94073 1227 448 aa, chain + ## HITS:1 COG:yicO KEGG:ns NR:ns ## COG: yicO COG2252 # Protein_GI_number: 16131534 # Func_class: R General function prediction only # Function: Permeases # Organism: Escherichia coli K12 # 1 448 23 470 470 757 98.0 0 MDKKMNNDNTDYVSNESGTLSRLFKLSQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGA AQMDPKVVFVTTCLIAGIGSIAMGVFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMG AIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLV MIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPD ISGVIGEVDLSGALSLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDSNGKFPNMNKAL YVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPP YATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMK VCTGRWRDLNLCVVVVATLFALKIILVD >gi|296918659|gb|GG773041.1| GENE 87 94126 - 94578 411 150 aa, chain + ## HITS:1 COG:no KEGG:APECO1_2789 NR:ns ## KEGG: APECO1_2789 # Name: yicN # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 150 10 159 159 290 100.0 1e-77 MIWIMLATLAVVFVVGFRVLTSGARKAIRRLSDRLNIDVVPVESMVDQMGKSAGDEFLRY LHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKARLAAPITDAQVRLALGFLR ETEPEMQDINAFQMRYNAFFQPAEGVHWLH >gi|296918659|gb|GG773041.1| GENE 88 94741 - 95979 1149 412 aa, chain + ## HITS:1 COG:yicM KEGG:ns NR:ns ## COG: yicM COG2814 # Protein_GI_number: 16131532 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 412 40 451 451 695 98.0 0 MLKWSAFPLKHATGNTMSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLT PMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLG SFLGELIGWRNVFNAAAAMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIA IFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLAL AGAPFVLALSALVLTLWGSDKIVATGVAIIWGLTFALIPVGWSTWITRSLADQAEKAGSI QVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVKMKKS >gi|296918659|gb|GG773041.1| GENE 89 96020 - 96313 194 97 aa, chain - ## HITS:1 COG:no KEGG:E2348C_3976 NR:ns ## KEGG: E2348C_3976 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 1 97 23 119 119 180 100.0 2e-44 MKPTMLLMITVFLIFPAISQAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLM LSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM >gi|296918659|gb|GG773041.1| GENE 90 96535 - 97353 779 272 aa, chain + ## HITS:1 COG:nlpA KEGG:ns NR:ns ## COG: nlpA COG1464 # Protein_GI_number: 16131531 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 1 272 1 272 272 496 98.0 1e-140 MKLTTHHLRAGAALLLAGVLLAGCDQSSSDEKHIKVGVINGAEQDVAEVAKKVAKEKYGL DVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSK KIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQI MELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVNDSVFIEDKNSPYVNILVAREDNKN AENVKEFLQSYQSPEVAKAAETIFNGGAVPGW >gi|296918659|gb|GG773041.1| GENE 91 97357 - 98280 718 307 aa, chain - ## HITS:1 COG:yicL KEGG:ns NR:ns ## COG: yicL COG0697 # Protein_GI_number: 16131530 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 307 1 307 307 497 99.0 1e-141 MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFIHGD KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV RKSRPGILVFCAILTSLIGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARKI NRPARHE >gi|296918659|gb|GG773041.1| GENE 92 98577 - 98720 71 47 aa, chain - ## HITS:1 COG:no KEGG:ECP_3864 NR:ns ## KEGG: ECP_3864 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 47 76 122 122 81 100.0 1e-14 MGYDSFFSIETIDKINKENIKEIKLKNDTTYVSLPNPTILITNDINT >gi|296918659|gb|GG773041.1| GENE 93 99515 - 100507 697 330 aa, chain - ## HITS:1 COG:STM3755 KEGG:ns NR:ns ## COG: STM3755 COG3943 # Protein_GI_number: 16767039 # Func_class: R General function prediction only # Function: Virulence protein # Organism: Salmonella typhimurium LT2 # 1 330 16 345 345 524 84.0 1e-149 MFASGDGRVRVECRFESDTIWLSQAAMAELYDKDVRTINEHLINIFSEGELVQNSTIRKF RIVRQEGKRQVSREIDHYNLEAILAVGYRVRSPRGTQFRQWATQTLQEYLIKGFVMDDER LKNPPVGSSVVPDYFDEMLERIRDIRASERRVYLRVREIFALAADYQPSLKETTQFFQTI QNKLHFACTGHTAAELIHKRADASQPHMGLTSYKGEEVRKGDVTVAKNYLTQDEVSELNR VVNMWLDFAEDQARRRQQVFLRDWQDKLDQFLQFNDREVLQGAGKISKKMADEKAQAEYV QFAEQQRRLKEAEGEKDIAGLLQWNKESKK >gi|296918659|gb|GG773041.1| GENE 94 100992 - 102374 482 460 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020673|ref|YP_526500.1| ribosomal protein L9 [Saccharophagus degradans 2-40] # 6 442 9 517 522 190 28 5e-47 MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAI SDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLT LLYTIVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPL GFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMRDDLRDIWQNDQWRIVGFLTIFN ILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTN ALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTG ISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSVTISIIIALFTIVPAICYLLS AIIAKRYYSLTTHNLKTVMEQLAQGKRRCQQQFTSQEVQN >gi|296918659|gb|GG773041.1| GENE 95 102384 - 104702 2013 772 aa, chain + ## HITS:1 COG:yicI KEGG:ns NR:ns ## COG: yicI COG1501 # Protein_GI_number: 16131527 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Escherichia coli K12 # 1 772 1 772 772 1628 98.0 0 MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRERTWQLDTPLFTLRFFSP QEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSL DFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVE TWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYF VIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPL HVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKEL QEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGER IPTDVQWFDGSDPQKMHKHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWG GDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH GSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPA CDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHSFLSLP VYVRDSTLLALGNNDQRPDYAWHEGTAFHLFNLQDGHEAVCEVPDADGSVIFTLKAARTG NTITVTGTGEAKNWTLCLRNIVKVNGLQGGSQAESEQGLVVTPQGNALTITL >gi|296918659|gb|GG773041.1| GENE 96 104997 - 106550 814 517 aa, chain + ## HITS:1 COG:lin2243 KEGG:ns NR:ns ## COG: lin2243 COG3711 # Protein_GI_number: 16801308 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 3 502 2 482 485 189 28.0 1e-47 MQMITSRQNRLLRFLLPRREYTTIVTIAGYLNVSEKTIQRDLRLLEQWLGQWRINVEKRA GAGVMLSAENIADLLHLDHLLVAECEEIDGVMNNARRVKIASQLLSETPNETSISKLSER YFISGASIVNDLRVIESWLAPLGLSLIRSPSGTHIEGSEGQVRQAMALLINGIINHNEPQ GVVYSRLDPGSYKALVHYFGEEEVLFVQSLLLDMENELSWSLGEPYYVNIFTHILIMMYR NTHGNALSREEDQTRQYDENIFNVASQMIHKIEQRIAHTLPDDEVWFIYQYIISSGVAID GQKDVSIISHMQASNEARLITWRLITVFSDIVDCDFSEDSALYDGLLVHIKPLINRLNYR IHIRNPLLEDIKAELADVWRLTQYVVNQVFKTWGENAVSEDEVGYLTVHFQAAMERQIAR KRVLLVCSTGIGTSHLLKSRILRAFPEWTIVDVISAANLSQVLPDNIELIISTINLPTVT MPVAYVTAFFNDADIKRVTEMVITEKLHHATSRVVEI >gi|296918659|gb|GG773041.1| GENE 97 106577 - 107047 469 156 aa, chain + ## HITS:1 COG:lin2242 KEGG:ns NR:ns ## COG: lin2242 COG1762 # Protein_GI_number: 16801307 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 1 149 6 154 157 132 48.0 2e-31 MDITKILNTNRVILDMQATNKAEAIEELTNLLKKDGAIDCRETFIKDVWQREAEGSTGFE NHIAIPHGKSSAVINTTLAIGRTRQDIPWETLDGSSVRCIILFAVRLEDQNTTHIRLLSQ VAGALADDDIIEQLLVETSPQKIIDLFSQYAQSDVF >gi|296918659|gb|GG773041.1| GENE 98 107065 - 107379 460 104 aa, chain + ## HITS:1 COG:lin2241 KEGG:ns NR:ns ## COG: lin2241 COG1445 # Protein_GI_number: 16801306 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Listeria innocua # 1 103 1 103 103 109 57.0 1e-24 MNIVCVAACTAGIAHTYIAREKLIKGAKALGHTIKVETQGTIGTENELQAADISAADVVI LAVDVKIKGEERFTNKRIVRVKTEIVIKSPVQFLEKVEKSLGNK >gi|296918659|gb|GG773041.1| GENE 99 107404 - 108495 1341 363 aa, chain + ## HITS:1 COG:lin2240 KEGG:ns NR:ns ## COG: lin2240 COG1299 # Protein_GI_number: 16801305 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Listeria innocua # 11 361 5 358 363 346 52.0 4e-95 MKENKIPVSQEIKKHLLTGISWMIPLIVAAGICIALGQVLGGTDVGEKTGTIPWMLNQIG GWGMGLIVPLISAAIAYSIADRPGFAPGLIVGFLCGQIHTGFIGGMLGGFLVGYTILLLK RYIRLPQSMQGLMPIMVLPVLSTIIGGLLMMTLIGKPIAWLQEALIHLLESMQGGSRFLM GAILGAMATFDFGGPVNKTMSLFSDGLLVSGVYGPEAVKFVGSIIPPFGITLSFLLTRHK YTRAEREALKAAFPMGICMITEGVIPIAARDLLRVVGSCVVASAVAGGLIMVWGVESPVP HGGMFVVPLFTHPLLFCLALGIGTVICGVMLSLWKKPVTERDEEFDELSDQKLKDEEITF TLE >gi|296918659|gb|GG773041.1| GENE 100 108507 - 109358 662 283 aa, chain + ## HITS:1 COG:lin2239 KEGG:ns NR:ns ## COG: lin2239 COG0191 # Protein_GI_number: 16801304 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 283 1 283 284 192 39.0 6e-49 MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPV AAAVVKTLAESASVPVALALDHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVV ELAASAQLCVEGELGHLADAPRYDQAANADLMTQPTDVEPFIAQTGIDLLAVSVGTAHGM YAPGVVPAIDFQRLAEISRCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA >gi|296918659|gb|GG773041.1| GENE 101 109439 - 110299 869 286 aa, chain + ## HITS:1 COG:lin2238 KEGG:ns NR:ns ## COG: lin2238 COG0191 # Protein_GI_number: 16801303 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 286 1 286 299 382 61.0 1e-106 MLVSMKELLQPTRQHGFAIGAFNVADNCFLRAVVDEAEATNTPAIIAIHPSEHDFVGDAF FAHVREITQRSPVPFVLHLDHGASVEHVLRAIRCGFTSVMIDGSLLPYEENVALTAEVVR LAHAVGVSVEGELGTIGQTGTSVEGGVSQVTYTDPAQAADFIARTGADTLAVAIGTAHGI YPKGMQPKLQMDILRDIAGRIDIPLVLHGGSANPDAEIAESVTLGVGKINISSDMKYAYF QKVREILAKESWWDPNVIYPDAINAAREVIRHKMKLFGSLGKASLY >gi|296918659|gb|GG773041.1| GENE 102 110347 - 111279 682 310 aa, chain + ## HITS:1 COG:VC0270 KEGG:ns NR:ns ## COG: VC0270 COG1940 # Protein_GI_number: 15640299 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Vibrio cholerae # 4 297 34 326 326 270 47.0 3e-72 MHYLGLDIGGTKIAAVVMDAHGWEIRRYRCPTQKSTYQQFVSCVVALIEQIRRDVQRPML TGIALPGSISPLTGLIKNANIQVINGHALQADLQQLLGQPVVIANDGNCFALSEACDGAG QDYDVVFGITLGTGCGGGIAIKQRPFIGAWGNAAECGHITLPGYTEQEDGPSVSCYCGKH NCVESFVSGSGFSERYQQMTGNLLTPAAIVTLAQRGDACAMQQVARFRQQLARTLATIVN VVDPGVIVIGGGLSNVELLITDLNAEVAPLVFTDQFTTPIVKAQHGDSSGMRGAAWLAMR NGEANETFTN >gi|296918659|gb|GG773041.1| GENE 103 111260 - 111940 533 226 aa, chain + ## HITS:1 COG:PM1374 KEGG:ns NR:ns ## COG: PM1374 COG3822 # Protein_GI_number: 15603239 # Func_class: R General function prediction only # Function: ABC-type sugar transport system, auxiliary component # Organism: Pasteurella multocida # 1 222 1 220 227 217 50.0 1e-56 MKRSQINYVIDKAHAIAQTFRVCLPEFAYFTVDDWLQRERDNWQEVVDLQLGWDITDFGR GDFNQTGLTLLTMRNGALGSAAYPKPYAEKMLQIQQDQQTPWHFHTHKMEDILNRGGGDL CMRLAWANEANLCDDQRVITVSVDGQRRTMKPGETLVLKPGQGICLPPRLYHRFWAEKAF VLGWEISMVNDDQHDNYFLEPGGRFPAIEEDEPVKWLLCGEYGILR >gi|296918659|gb|GG773041.1| GENE 104 111984 - 113693 1391 569 aa, chain - ## HITS:1 COG:no KEGG:ECP_3753 NR:ns ## KEGG: ECP_3753 # Name: not_defined # Def: AsmA family; region: AsmA; pfam05170 # Organism: E.coli_536 # Pathway: not_defined # 1 569 9 577 577 1095 99.0 0 MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPS HIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFK ADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVLGTKAQIQFSAGSLSLNDVPA TNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD FFAPLRSVPSLQIGRLEVIDARLQGPDWAVADLDLSLRNMTFSKDDWQTQEGKLSMNASE FIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGGMVRTSGNWQRDGKTLILDDAAIAGLE YTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTD HKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ TPQRQTHISLNGRGVPVNILQHWGWPELPLTGDGNIQLTASGDIQVNVPLKPTVSGQLHA VNAAKQQVTQTMNAGVVSSGEVTSTEPVQ >gi|296918659|gb|GG773041.1| GENE 105 113814 - 115205 1657 463 aa, chain - ## HITS:1 COG:ECs4530 KEGG:ns NR:ns ## COG: ECs4530 COG2233 # Protein_GI_number: 15833784 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 785 100.0 0 MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITPALLICQA LGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKT GGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPLVSGVVVMIIGLSLIQVGLTS IGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNPYLRVASLVIAMAAGYALAWFMG MLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLMLVFMITSLETIGDITATSDVSEQPV SGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLI VLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGL GVSQQPLILQFAPEWLKNLLSSGIAAGGITAIVLNLIFPPEKQ >gi|296918659|gb|GG773041.1| GENE 106 115485 - 116690 1461 401 aa, chain + ## HITS:1 COG:ECs4529 KEGG:ns NR:ns ## COG: ECs4529 COG0786 # Protein_GI_number: 15833783 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Escherichia coli O157:H7 # 1 401 1 401 401 618 99.0 1e-177 MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLLVALALLILKKSMGWEV NFDMSLRDPLMLAFFATIGLNANLASLRAGGRVVGVFLIVVVGLLVMQNAIGIGMASLLG LDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEVAMACATFGLVLGGLIGGPVA RYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLIETIALIAICLTVGKIVAQLLAG TAFELPTFVCVLFVGVILSNGLSMMGFYRVFERAVSVLGNVSLSLFLAMALMGLKLWELA SLALPMLAILVVQTIFMALYAIFVTWRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAI TERFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPIFAG >gi|296918659|gb|GG773041.1| GENE 107 116724 - 118805 2133 693 aa, chain - ## HITS:1 COG:ZrecG KEGG:ns NR:ns ## COG: ZrecG COG1200 # Protein_GI_number: 15804193 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Escherichia coli O157:H7 EDL933 # 1 693 12 704 704 1309 99.0 0 MKGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRYEDRTHLYPIGELLPGV YATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAK RGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALDLLDTCAIE ELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQHPAQRRLILEELLAHNLSMLALR AGAQRFHAQPLSANDALKNKLLAALPFKPTGAQARVVAEIERDMALDVPMMRLVQGDVGS GKTLVAALAALRAVAHGKQVALMAPTELLAEQHANNFRNWFAPLGIEVGWLAGKQKGKAR LAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFH PHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRTDIIDRVRHACM TEGRQAYWVCTLIEESELLEAQAAEATWEELKLALPELNVGLVHGRMKPAEKQAVMASFK QGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKT PLSKTAQIRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPE VQRLARHIHERYPQQAKALIERWMPETERYSNA >gi|296918659|gb|GG773041.1| GENE 108 118811 - 119500 637 229 aa, chain - ## HITS:1 COG:ECs4526 KEGG:ns NR:ns ## COG: ECs4526 COG0566 # Protein_GI_number: 15833780 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 447 99.0 1e-125 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWSTMQAAG >gi|296918659|gb|GG773041.1| GENE 109 119507 - 121615 1927 702 aa, chain - ## HITS:1 COG:ECs4525 KEGG:ns NR:ns ## COG: ECs4525 COG0317 # Protein_GI_number: 15833779 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Escherichia coli O157:H7 # 1 702 1 702 702 1412 99.0 0 MYLFESLNQLIQNYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMK LDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFR KMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKT ELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHL YSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKA NGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQ SLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHA CVGARVDRQPYPLSQPLTSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKRD DSVSLGRRLLNHALGGSRKLNEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKN LQHGDASIPPATQSHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCR NIRGYQKEPEKFMAVEWDKETAQEFITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTE EKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN >gi|296918659|gb|GG773041.1| GENE 110 121634 - 121909 490 91 aa, chain - ## HITS:1 COG:ECs4524 KEGG:ns NR:ns ## COG: ECs4524 COG1758 # Protein_GI_number: 15833778 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Escherichia coli O157:H7 # 1 91 1 91 91 112 100.0 2e-25 MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN NQILDVRERQEQQEQEAAELQAVTAIAEGRR >gi|296918659|gb|GG773041.1| GENE 111 121964 - 122587 544 207 aa, chain - ## HITS:1 COG:gmk KEGG:ns NR:ns ## COG: gmk COG0194 # Protein_GI_number: 16131519 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Escherichia coli K12 # 1 207 1 207 207 398 100.0 1e-111 MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHD EFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARS IFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLK TIIRAERLRMSRQKQRHDALISKLLAD >gi|296918659|gb|GG773041.1| GENE 112 122727 - 122984 59 85 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C4192 NR:ns ## KEGG: UTI89_C4192 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 85 3 87 87 165 98.0 7e-40 MIHCNKDDSQEASSQTPFLPLGFAFTTLYICLTIYSGGDDESMDGDINKYLVLAIIGVGG LSGLVASQSTGRNFPPATANKTVGR >gi|296918659|gb|GG773041.1| GENE 113 122845 - 124527 948 560 aa, chain + ## HITS:1 COG:yicF KEGG:ns NR:ns ## COG: yicF COG0272 # Protein_GI_number: 16131518 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli K12 # 1 560 3 562 562 1031 96.0 0 MKVWMAILISILCWQSSAWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV YDQLSARLTQWQRCFGNETRDVMMPPLNGAVMHPVAHTGVRKMADKNALSLWMRERSDLW VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVRLISAVPQTVSGPLANSTLQGE IFLQREGHIQQQMGGINARAKVAGLMMRQGNSDTLNSLAVFVWAWPDGPHLMTDRLKDLA TAGFTLTQTYTRAVKNADEVAHVRNEWWKAKLPFVTDGVVVRAAKEPESRHWLPGQAEWL VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA PGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWL GSKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA RQQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQQPGTGSGRARQVIEWKEN AQIKKLGSWLAAQQITGFEP >gi|296918659|gb|GG773041.1| GENE 114 124524 - 125141 875 205 aa, chain - ## HITS:1 COG:yicG KEGG:ns NR:ns ## COG: yicG COG2860 # Protein_GI_number: 16131517 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 205 19 223 223 326 100.0 2e-89 MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVK HPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGHGPIIAVV AAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLVF GFFARLLALRLKLGLPVFYYSHEGH >gi|296918659|gb|GG773041.1| GENE 115 125433 - 126257 413 274 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4059 NR:ns ## KEGG: ECS88_4059 # Name: dinD # Def: DNA-damage-inducible protein D # Organism: E.coli_S88 # Pathway: not_defined # 1 274 5 278 278 503 100.0 1e-141 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK AIHQRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK >gi|296918659|gb|GG773041.1| GENE 116 126958 - 127245 104 95 aa, chain - ## HITS:1 COG:no KEGG:ECs1588 NR:ns ## KEGG: ECs1588 # Name: not_defined # Def: transcriptional activator # Organism: E.coli_O157J # Pathway: not_defined # 1 89 1 89 90 87 56.0 2e-16 MIRDRKAEELESKGLYRRAAARWAEVMMLADGDKEREHAANRRSECIRKAARPPATTDRF GDLRQAVKRTHSALGMDEEARGYFRRYRDKDCQRQ >gi|296918659|gb|GG773041.1| GENE 117 127505 - 127948 258 147 aa, chain + ## HITS:1 COG:no KEGG:ETA_24190 NR:ns ## KEGG: ETA_24190 # Name: not_defined # Def: hypothetical protein # Organism: E.tasmaniensis # Pathway: not_defined # 5 145 4 144 146 184 64.0 8e-46 MVFAMSKSNLIAFRIPSELQDEFNRSVLASGGDKTSWLVDAIRMKLGQPEKSIDSRMLGL VERMEKAAASLIAGKPNIPPKPYNETAVIKIIADTIQQGFDNGRVIAERLNEAGYQTKAG KAWDKDIYSAWKRQGSNAEKLSVALRM >gi|296918659|gb|GG773041.1| GENE 118 127965 - 128156 87 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237703436|ref|ZP_04533917.1| ## NR: gi|237703436|ref|ZP_04533917.1| predicted protein [Escherichia sp. 3_2_53FAA] predicted protein [Escherichia sp. 3_2_53FAA] conserved domain protein [Escherichia coli MS 110-3] hypothetical protein ERLG_03786 [Escherichia coli H263] # 1 63 63 125 125 123 100.0 4e-27 MFARWFIGILIGQLLVMNGIFVLIGAKLLHFSDFVINLFMGGTLAEVFGIVLVMARYLFS KHV >gi|296918659|gb|GG773041.1| GENE 119 128346 - 128828 207 160 aa, chain - ## HITS:1 COG:no KEGG:CMM_2222 NR:ns ## KEGG: CMM_2222 # Name: not_defined # Def: hypothetical protein # Organism: C.michiganensis # Pathway: not_defined # 1 159 7 160 161 127 43.0 2e-28 MSNTSAHALLKDIWGDRKFPVDPVWIANELGLDVVETTLDDDVSGALLKEPEQDPVIILN RNDSNVRKRFTCAHELGHYVKRTENGQPLEYEFVDYRGKLASQGVDSEEIFANNFAACLL MPEKEVRRLNNAGYAPVMMASYFGVSDDAIRYRLKNLGLR >gi|296918659|gb|GG773041.1| GENE 120 129501 - 129614 84 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVSPAIVCVLVGRGCKIFATDTPRARTGHEIGVLLWQ >gi|296918659|gb|GG773041.1| GENE 121 129710 - 130135 83 141 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315285435|gb|EFU44880.1| ## NR: gi|315285435|gb|EFU44880.1| hypothetical protein HMPREF9539_04634 [Escherichia coli MS 110-3] # 10 141 1 132 132 231 100.0 1e-59 MYQMPCLGYMMIAILNKAKGRVGVRGQAVIIILLGLIVAKLYPTLSMVFFAIIGAAIFTY IIKHTALWFYKIDIVQKFVRPVSMLLLALIPIGVAYVIDVFYPSDTERWLIVLYCYIGVA LFCGFHWCFEKINDSISKNKD >gi|296918659|gb|GG773041.1| GENE 122 130155 - 132272 105 705 aa, chain - ## HITS:1 COG:no KEGG:SG0943 NR:ns ## KEGG: SG0943 # Name: not_defined # Def: hypothetical protein # Organism: S.glossinidius # Pathway: not_defined # 267 704 1 380 383 320 45.0 1e-85 MAANVILPEGFVLDEQPDNSQFPDSSQLPDGFVLDAQPEQQQSPLVSPEENSRQENVVNN ANGFDRFMYGVLSGLMDVGKGVGLFQDMTPEEQAAIQSLQQKLAAKPSTAQDVGEFVGQA APFVSGGGIISQVPKGAARLAAAVGLGAGEGAIVANGTNSDVASGAAIGAVAGPVAELAG PAINKIAGKLTKKNVSSIPDIEGITPAEEKIRKLSAQGNPNLASSLEGLDLKPQKEIVEA ANRLHVDSVLPSHLSGNEQYQAVEQALKSRTGSALKAQEDKAISELASSADKIIDDVAGA PDALAMSEKYIYQINSRMEALKNRSDQLYKRVDSALSPRTKVEANNTSTMLEKIADDLGG WDNLDPIEKRVFTAINPGPDSILTYANLNRQRRLVGDALNKKQGPYKDADKEALSRLYGA LAEDQKSVLSNTGYLRDFEVAQRLVAMRKNLERQMVNLRGKTLNGDIAYKVTNSLQSMAK GDARGFREIMQNTPSRTLRRELVGTALRDMLSSGKRGADFNPSGFADWWQNLQHSGQLKT LAEHLPKETMSGLYDVYKVARAIKNAKAHEISTGKLNEFVNRFNRVTAPYELAAKHIQKI GTMVGAHFGSLGAIAGADIGARLASKARLAGGAGAADAADKLIASPAFQSAVKNLHGKAP GHIVDSRIRRSPQWKSFFNSLPEQEKRTIARLGIITWLSNDPDND >gi|296918659|gb|GG773041.1| GENE 123 132257 - 133600 793 447 aa, chain - ## HITS:1 COG:ECs3232 KEGG:ns NR:ns ## COG: ECs3232 COG1835 # Protein_GI_number: 15832486 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Escherichia coli O157:H7 # 1 212 1 211 378 201 48.0 3e-51 MATWQQGINSGGFLAGIGTQNENAPKASDINATLGLIRENNELARSGANNVALTGLRGLA GVADIYKQQQQQERKAAFQKGYADAYASGDREQMRNLITAFPEEFEEVRKGMSYVDDAQR DDYGNLALKAQVASSLGQGAFGRFMMDNEQEMRRLGIPPETIAEMQVNDPQGFQHFAGNL ALFSLGHEKYFDIKDQMEGRRLEQGRLDESMRQADMENARGWANIQNAQLDRAQRAQIHS DEMGLKLMELGQKGKPSADLIKGLNSDITNFGKNYNSVRAAANSLQALSKVNTGAAQLGI IFNYMKSLDPQSVVREGEQVQVMRSDGIWGQIKGYIDQLNAGNGLSQEAKDNIVNAAKIN ANAMGQQFNQQVDEYLDTYGETIPQGLRKSLERRKAKLFDDVSGQPTSQAGTGQAKAATG GISEGATATNPKTGQKIIYRNGKWQQM >gi|296918659|gb|GG773041.1| GENE 124 133605 - 133778 95 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|309700538|emb|CBI99833.1| ## NR: gi|309700538|emb|CBI99833.1| prophage protein [Escherichia coli ETEC H10407] # 1 57 44 100 100 102 100.0 8e-21 MAISVKPVLISEKQMEAIKKIQEEQRKKSEVGVAPTIHEIARGLMDKALAYTLTGRG >gi|296918659|gb|GG773041.1| GENE 125 134097 - 134408 70 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237703430|ref|ZP_04533911.1| ## NR: gi|237703430|ref|ZP_04533911.1| predicted protein [Escherichia sp. 3_2_53FAA] predicted protein [Escherichia sp. 3_2_53FAA] hypothetical protein ETEC_0328 [Escherichia coli ETEC H10407] hypothetical protein ERLG_03792 [Escherichia coli H263] # 1 103 1 103 103 178 100.0 1e-43 MNYENFVVLTFKNVTPLYTGFYKSLVKLFAVLGYVPNRSEYLRLPDEQNIPYKENRCFCC TTCTTMSQTLVWRGLQVVQVGKNDLSPPVQTCTIYLIFTHSST >gi|296918659|gb|GG773041.1| GENE 126 134382 - 135119 211 245 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237703429|ref|ZP_04533910.1| ## NR: gi|237703429|ref|ZP_04533910.1| predicted protein [Escherichia sp. 3_2_53FAA] hypothetical protein HMPREF9530_04077 [Escherichia coli MS 21-1] predicted protein [Escherichia sp. 3_2_53FAA] hypothetical protein HMPREF9530_04077 [Escherichia coli MS 21-1] putative prophage protein [Escherichia coli ETEC H10407] hypothetical protein HMPREF9539_04641 [Escherichia coli MS 110-3] # 1 245 1 245 245 508 100.0 1e-142 MNNNYCILQGMTRTEREELKSFATQCGNAGDIQSLERTLIMIAHWMRQGQRVSFTEYASQ WTEAQRERSDGNHSTPEMAKQWPFSGKRCISPGGSDYYPAGVGDEPCCDETEIRHAVTVI TAEYPQFNLDGLALHNRNADWENPLDNPSFIVSAKSCLRWIRDNGMSNAQIESFPQDNPT SDTLKHEVERYNQINHQHSDHPHYIPNGAFIAAMVASGYKVKPAGRMNAFFNISKKGLCA AMGKN >gi|296918659|gb|GG773041.1| GENE 127 135109 - 135339 172 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237703428|ref|ZP_04533909.1| ## NR: gi|237703428|ref|ZP_04533909.1| predicted protein [Escherichia sp. 3_2_53FAA] conserved domain protein [Escherichia coli MS 182-1] conserved domain protein [Escherichia coli MS 21-1] predicted protein [Escherichia sp. 3_2_53FAA] conserved domain protein [Escherichia coli MS 182-1] conserved domain protein [Escherichia coli MS 21-1] putative prophage protein [Escherichia coli ETEC H10407] conserved domain protein [Escherichia coli MS 110-3] hypothetical protein ERLG_03794 [Escherichia coli H263] # 1 76 1 76 76 151 100.0 1e-35 MMSTPFYKVRQLASSSGWQLRFEGRSDWLPIAAWANVEMCIDGDTVEIIIPCVASRDGCI EPTDMAAEIREVKHEQ >gi|296918659|gb|GG773041.1| GENE 128 135516 - 137867 670 783 aa, chain - ## HITS:1 COG:YPO0880_1 KEGG:ns NR:ns ## COG: YPO0880_1 COG4643 # Protein_GI_number: 16121187 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 6 337 4 293 354 227 41.0 7e-59 MRNIDLIRQVISASENNWPHVLGCLNINVPDSPRRHAPCPACGGKDRFRFDDNGRGSFIC NQCGAGDGLDLIKRVNNCDTTEAALLAADVLGIDYRTTETPEATSQKREQLETERQRREQ ERLKRAEKDEQQRRDTFSRQFDDMRRKAVNGKSDYLVAKGVGDFTFPVLPDGSLLLALVD KSGAVTAAQTITSHGEKRLLTGSAKRGAYHAINAQKRPHSIIIAEGVATALSCHLIRPDA MTVAAIDAGNLLPVAEVMRRTYPQAQIIIAADNDHQQGNSESGGINTGKDAAERAAISVA GWVSLPPTDYKADWNDYHQQHGLAAATAAFKDSMYQPRGKGAQVKNHKQSVGALNEISSG EVLSDDEIAVLEEINRTFTHVTIGGKHKVVSLKPSQTGGVSHVFEDLSQFQHYFHHKPRV ARKLAGSAWLSWSGKNYKPGGVGFYPVPDKCPDDVFNLYEGLALEPIEGDCTVYLNHLLQ VVCAGNEEAYQYLIQWMAHIIQKPDEKPSVAIVMKSVPGTGKGTTVKPLLQILGQYAAHI NGAGHISGRFNSILANKLLVFADEVTIHKPSEADRLKAIISEPTFNLERKGIDAEPMPNF ARLIFASNSTQVLQAGIRERRYLVLEPSPEKAQSREYFDRLYSWLNDGGAAKLLWHLKGV DLSGFDPQRAPQTDALREEILLGLSGVELFLYGELINEPPFNGEVRLFAKDMVSRFVAWS LERGEKLKEPAARSLLGKSLAQMGLVKHGRPDRGNGVFYELPEVGVLQAAFARLIGMGGY DVF >gi|296918659|gb|GG773041.1| GENE 129 137880 - 138482 416 200 aa, chain - ## HITS:1 COG:no KEGG:ETA_24230 NR:ns ## KEGG: ETA_24230 # Name: not_defined # Def: conserved hypothetical protein, related to bacteriophage P27 # Organism: E.tasmaniensis # Pathway: not_defined # 7 200 13 203 203 158 42.0 1e-37 MNNFLTFHAEATPDGVNIMHRSNNGMTERVETVSYIDAVNRLDAGDYDDKPDEGMFIHLA IASGGNQGYFDYTSQHHVIMWRWLIATALINEMRKENGTVSIIDDSGNHSVVSVYSNGIV AMPLYPVAERLAMANNIEGAMIEKYGVDVGTKNAIIFYSNMFDVEQGTLTSFGREVLADL HNSFIAELNENGIPEAPVTH >gi|296918659|gb|GG773041.1| GENE 130 138475 - 138696 281 73 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E4082 NR:ns ## KEGG: SbBS512_E4082 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 73 1 73 73 134 100.0 1e-30 MTNIQLIEAQCRIEQVQTVLGFWLEGASPSNRDKLMIGAVMSLLNGVPEAIQEADELLGK YELQNHSGEAKHE >gi|296918659|gb|GG773041.1| GENE 131 138693 - 138956 123 87 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237703424|ref|ZP_04533905.1| ## NR: gi|237703424|ref|ZP_04533905.1| predicted protein [Escherichia sp. 3_2_53FAA] predicted protein [Escherichia sp. 3_2_53FAA] putative prophage protein [Escherichia coli ETEC H10407] hypothetical protein HMPREF9539_04646 [Escherichia coli MS 110-3] hypothetical protein ERLG_03798 [Escherichia coli H263] # 1 87 1 87 87 162 100.0 1e-38 MNINLIYRHPCELEIESLLSREEPYPDTFTLADRTTERLTRARTGLVHVMNEILPSVGGE QATVINSWLQKVTSLIDISLIDVESAK >gi|296918659|gb|GG773041.1| GENE 132 138953 - 139147 135 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237703423|ref|ZP_04533904.1| ## NR: gi|237703423|ref|ZP_04533904.1| predicted protein [Escherichia sp. 3_2_53FAA] conserved domain protein [Escherichia coli MS 182-1] predicted protein [Escherichia sp. 3_2_53FAA] conserved domain protein [Escherichia coli MS 182-1] putative prophage protein [Escherichia coli ETEC H10407] conserved domain protein [Escherichia coli MS 110-3] hypothetical protein SDB_01295 [Shigella dysenteriae CDC 74-1112] conserved hypothetical protein [Escherichia coli UMNK88] # 1 64 1 64 64 86 100.0 6e-16 MNNSINTPRLTSALQLIEQAAAVLVAVSLSAEEMDATDVVDAIKACSSLVNDARAELVIL GGEK >gi|296918659|gb|GG773041.1| GENE 133 139140 - 140207 286 355 aa, chain - ## HITS:1 COG:no KEGG:Dda3937_02195 NR:ns ## KEGG: Dda3937_02195 # Name: not_defined # Def: putative prophage protein # Organism: D.dadantii_3937 # Pathway: not_defined # 113 281 13 181 246 206 63.0 1e-51 MIPVQKKTFSLAGMSPKSSNMTAKSDINTADTSKVYHLLVVGADALTMSEITVDGVSVEK VSGYAREFLVVDGFLCSCSDSTKTFVHARDVNEMSAMYCASGSSNSEFSESIKKSLPLCG NTVYGYKAPHKTGAGIGVLKILKATYDAPSVFFYVVGLTHPFFGRWCIIQRLCQSMVAQA GASSEAPVSFRAGYANPVWATTSEIGVSGGSVTCYLKEAATCWLLPLPKKRNLSGLSPQF AAIARQLPPKFIILLPSLNAMLAVLWCAITSAFLLVVSAWRWHMIKNYDVHMDPLERTSQ IITLTEVINDILVSNSPSRDERLKALLAILDLAVRDVHFLLEGGEMPVKTGATNE >gi|296918659|gb|GG773041.1| GENE 134 140376 - 141209 622 277 aa, chain - ## HITS:1 COG:ECs1251 KEGG:ns NR:ns ## COG: ECs1251 COG3561 # Protein_GI_number: 15830505 # Func_class: K Transcription # Function: Phage anti-repressor protein # Organism: Escherichia coli O157:H7 # 29 147 3 107 209 94 42.0 2e-19 MNIEKSRLISEAAPHLNASLGTINGNEFAAIVPVISGHIGGRETNIVSAKALHKALGVGK DFSTWITDRISEYDFTIGHDYSVHKTISPNLGKSPNGAAYSKIKHSGRPGKDYLLSVGMA KELAMIERNDQGRAIRRYFIQCEEELQRTVPEIAARYRRQLKARISAANNFKPMCDALNM ARAEQGKTTQQHHYTNESNMISRIVLGGLTAKQWARINGYSGEPRDHMNAEQLEHLSYLE STNITLIDMGMEYEQRKGELTHLSQRWLAKRLEALNV >gi|296918659|gb|GG773041.1| GENE 135 141222 - 141653 267 143 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E4075 NR:ns ## KEGG: SbBS512_E4075 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 143 1 143 143 234 84.0 6e-61 MEKKNRPLQAANSDIRVSDITPLTKSLQAPKRTPKKHRARVYMLRTGIEGWTENDILRYC RLSSGRNYATELERQLGITLERIDEKNPDGIGTHLRYRFSCRGDVLKVITHVNHLANIND HNGLSQQEIADILKLYPDAFNAA >gi|296918659|gb|GG773041.1| GENE 136 141653 - 141871 94 72 aa, chain - ## HITS:1 COG:no KEGG:Dd1591_3999 NR:ns ## KEGG: Dd1591_3999 # Name: not_defined # Def: phage transcriptional regulator AlpA # Organism: D.zeae # Pathway: not_defined # 1 69 1 69 73 119 89.0 5e-26 MTAHKPASSAIPTTGYIRRFRMPELLGVSLPTIDRWVKNGTLPRPVKLTDNVTAFDAVEI NNWLAERRGKVA >gi|296918659|gb|GG773041.1| GENE 137 142343 - 142891 132 182 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4536 NR:ns ## KEGG: ECO103_4536 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 182 35 216 216 233 65.0 2e-60 MRISDVPEENFEYVDFVRTHLARAIKVYRGEKTSKDEPCHALDIFLASYPFIDTNTPEII VQKISEAIDDLRGTKGWEEKARNLGGLQLVNYIKETNRSGRGQHRKQDEENGTMKMMGLI VHLLIKKSGSSSYIQNGKPNRTAIYRDIETLIKDEGISHKGIAKATFLEKISRALLAVHD LD >gi|296918659|gb|GG773041.1| GENE 138 142990 - 144258 366 422 aa, chain - ## HITS:1 COG:Z0324 KEGG:ns NR:ns ## COG: Z0324 COG0582 # Protein_GI_number: 15799964 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 EDL933 # 1 401 18 403 410 144 31.0 4e-34 MPKLTDMQIRAWIKAGDRFDGKADGNGLYICYPKNYTVPFWRFRYKLAGKQRAMVIGSYS ELSLSKARETAKELSARVALGYDVAAEKQERKAEALAKMEAEKNAMRVSDLASEYFERQI LPRWKHPDILRRRIDKDINPCIGHMKVEDVKPRHIDDMLKGIVDRGAPTIATDVLRWARR IFDYGIKRHALEINPCSAFEVSDAGGKEVSRDRWLTRDELIRLFEAMRTAKGFSRQNELT FKLLLALCVRKMELCAARWEEFDLDGAVWHLPEERSKNGDPIDIPLPSPAVEWLRELHTF SCNSAWVLPARKMQNRMIPHIQESTLPVALAKVRAEMPDVPNFTIHDFRRTARTHLAALG VDPVVAERCLNHRIKGVEGIYNRHQYFDERKAALAQWADLLVALESGKDYNVTPFDKARR QM >gi|296918659|gb|GG773041.1| GENE 139 144447 - 145310 1172 287 aa, chain - ## HITS:1 COG:ECs4519 KEGG:ns NR:ns ## COG: ECs4519 COG1561 # Protein_GI_number: 15833773 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 454 99.0 1e-128 MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRSRLTRG KVECTLRYEPDVSAQGELILNEKLAKQLVTAANWVKMQSDEGEINPVDILRWPGVMAAQE QDLDAIAAEILAALDGTLDDFIIARETEGQALKVLIEQRLEGVTAEVVKVRAHMPEILQW QRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEELDRLEAHVKETYNILKKKEAVGR RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE >gi|296918659|gb|GG773041.1| GENE 140 145437 - 146153 827 238 aa, chain + ## HITS:1 COG:ECs4518 KEGG:ns NR:ns ## COG: ECs4518 COG0689 # Protein_GI_number: 15833772 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 416 100.0 1e-116 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQ ADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVED SAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLLALARGGIESIVATQKAALAN >gi|296918659|gb|GG773041.1| GENE 141 146262 - 146903 808 213 aa, chain + ## HITS:1 COG:pyrE KEGG:ns NR:ns ## COG: pyrE COG0461 # Protein_GI_number: 16131513 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 213 1 213 213 420 99.0 1e-118 MKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDS GIEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEAKDHGEGGNLVGSALQGRI MLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRGEISAIQEVERDYNCKVIS IITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV >gi|296918659|gb|GG773041.1| GENE 142 146940 - 147536 652 198 aa, chain - ## HITS:1 COG:ECs4516 KEGG:ns NR:ns ## COG: ECs4516 COG1309 # Protein_GI_number: 15833770 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 198 15 212 212 339 99.0 2e-93 MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFD SLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGHALMFEQDR LQGRINQLFERIEAQLRQVLREKRMREGEGYATDETLLASQILAFCEGMLSRFVRSEFKY RPTDDFDARWPLIAAQLQ >gi|296918659|gb|GG773041.1| GENE 143 147643 - 148101 609 152 aa, chain - ## HITS:1 COG:ECs4515 KEGG:ns NR:ns ## COG: ECs4515 COG0756 # Protein_GI_number: 15833769 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Escherichia coli O157:H7 # 2 152 1 151 151 298 99.0 4e-81 MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELAPGDTTLVPTGLAIHIA DPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVWNRGQDNFTIQPGERIAQM IFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ >gi|296918659|gb|GG773041.1| GENE 144 148079 - 149299 1042 406 aa, chain - ## HITS:1 COG:ECs4514 KEGG:ns NR:ns ## COG: ECs4514 COG0452 # Protein_GI_number: 15833768 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Escherichia coli O157:H7 # 1 406 25 430 430 763 99.0 0 MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQAVSGYPV SDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTICLATPAPVAV LPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRMLDPLTIVDMAVAHF SPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAARRGANVTLVSGPVSL PTPPFVNRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDEL TIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQ GFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNRR >gi|296918659|gb|GG773041.1| GENE 145 149471 - 150139 412 222 aa, chain + ## HITS:1 COG:ECs4513 KEGG:ns NR:ns ## COG: ECs4513 COG2003 # Protein_GI_number: 15833767 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli O157:H7 # 1 222 3 224 224 432 99.0 1e-121 MKNNAQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER EIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI >gi|296918659|gb|GG773041.1| GENE 146 150356 - 150592 403 78 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804178|ref|NP_290217.1| 50S ribosomal protein L28 [Escherichia coli O157:H7 EDL933] # 1 78 1 78 78 159 100 8e-38 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID KKGIDTVLAELRARGEKY >gi|296918659|gb|GG773041.1| GENE 147 150613 - 150780 280 55 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804177|ref|NP_290216.1| 50S ribosomal protein L33 [Escherichia coli O157:H7 EDL933] # 1 55 1 55 55 112 100 1e-23 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK >gi|296918659|gb|GG773041.1| GENE 148 150878 - 151687 800 269 aa, chain + ## HITS:1 COG:ECs4510 KEGG:ns NR:ns ## COG: ECs4510 COG0266 # Protein_GI_number: 15833764 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 556 100.0 1e-158 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLL LELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL EGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG IHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK GEPCRVCGTPIVATKHAQRATFYCRQCQK >gi|296918659|gb|GG773041.1| GENE 149 151726 - 152205 388 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 2 159 3 160 164 154 46 4e-36 MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVELAQQATA HLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMP SKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA >gi|296918659|gb|GG773041.1| GENE 150 152213 - 153490 1155 425 aa, chain - ## HITS:1 COG:ECs4508 KEGG:ns NR:ns ## COG: ECs4508 COG1519 # Protein_GI_number: 15833762 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Escherichia coli O157:H7 # 1 425 1 425 425 831 99.0 0 MLELLYTALFYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRHPLKPGGIMLHSVSVGE TLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNK VDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRITLI AAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATST HEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSTS TQVVVGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICA RLEQASGLITVTDATTLAKEVSSLLTDADYRSFYGRHAVEVLYQNQGALQRLLQLLEPYL PPKTH >gi|296918659|gb|GG773041.1| GENE 151 153939 - 154961 627 340 aa, chain + ## HITS:1 COG:ECs4507 KEGG:ns NR:ns ## COG: ECs4507 COG0859 # Protein_GI_number: 15833761 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 1 340 13 352 352 692 98.0 0 MRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNKKAKASEK IANFFHLIKVLRANKYDLIVNLTDQWMIAILVRLLNARVKISQDYHHRQSAFWRNSFTHL VPLQGGNVVESNLSVLTPLGLESLVKQTTMSYPPASWKRMRRELDHAGVGQNYVVIQPTA RQIFKCWDNAKFSAVIDALHARGYEVVLTSGPDKDDLACVNEIAQGCQTLPVTALAGKVT FPELGALIDHAQLFIGVDSAPAHIAAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYR EMPTRDQRDRNEMYLSVIPAADVIAAVDKLLPSSTTGTSL >gi|296918659|gb|GG773041.1| GENE 152 154958 - 156082 659 374 aa, chain + ## HITS:1 COG:ECs4506 KEGG:ns NR:ns ## COG: ECs4506 COG0438 # Protein_GI_number: 15833760 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 374 1 374 374 764 99.0 0 MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGECPDVFELIKVPVKSHT NHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVCYAEKVAQEKGFFYRLTSR YRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAERFHILPPGIYPDRKYSQQPA NSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEALASLPDSLRHNTLLYVVGQDKPR KFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTT AVCGYAHYIVDANCGEAIAEPFRQETLNEILRKALTQSSLRQAWAENARHYADTQDLYSL PEKAADIITGGLDG >gi|296918659|gb|GG773041.1| GENE 153 156075 - 156872 559 265 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4044 NR:ns ## KEGG: ECS88_4044 # Name: waaP # Def: kinase that phosphorylates core heptose of lipopolysaccharide # Organism: E.coli_S88 # Pathway: Lipopolysaccharide biosynthesis [PATH:ecz00540]; Metabolic pathways [PATH:ecz01100] # 1 265 4 268 268 532 100.0 1e-150 MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAGKSYFLKWHRGTTLKEI IKNLLSLRMPVLGADREWNAIHRLRDVGVDTMYGVAFGEKGINPLTRTSFIITEDLTPTI SLEDYCADWATNPPDVRVKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFSGKEEV LKISVIDLHRAQIRAKVPRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFVAPLKDIIK QEQGLLSQAEEKATKIRERTIRKSL >gi|296918659|gb|GG773041.1| GENE 154 156888 - 157904 527 338 aa, chain + ## HITS:1 COG:STM3718 KEGG:ns NR:ns ## COG: STM3718 COG1442 # Protein_GI_number: 16767003 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Salmonella typhimurium LT2 # 1 338 1 337 337 358 51.0 6e-99 MSAHYFNPQEMINKTIIFDESPEASVASSFHVAYGIDQNFLFGCGVSITSVLLHNNDVSF VFHVFIDDIPEADIQRLSQLAKSYHTCIQIHLVNCERLKALPTTKNWSIAMYFRFVIADY FIDQQDKILYLDADIACQGNLKPLITMDLANNVAAVVTERDANWWSLRGQSLQCNELEKG YFNSGVLLINTLAWAQESVSAKAMSMLADKAIVSRLTYMDQDILNLILLGKVKFIDAKYN TQFSLNYELKKSFVCPINDETVLIHYVGPTKPWHYWAGYPSAQPFIKAKEASPWKNEPLM RPVNSNYARYCAKHNFKQNKPINGIMNYIYYFYLKIIK >gi|296918659|gb|GG773041.1| GENE 155 157921 - 158916 332 331 aa, chain + ## HITS:1 COG:STM3717 KEGG:ns NR:ns ## COG: STM3717 COG1442 # Protein_GI_number: 16767002 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Salmonella typhimurium LT2 # 13 331 18 332 336 276 47.0 3e-74 MNEFIKERFSYLADNKKENAPELNVSYGIDKNFLYGAGVSISSVLINNSDINFVFHVFTD YVDDDYLKSFNETAKQFNTSIIVYLIDPKYFADLPTSQFWSYATYFRVLSFEYLSESIST LLYLDADVVCKGSLKPLTKIIFKDEFAAVIPDNDSTQAACAKRLNIPEMNGRYFNAGVIY VNLKKWHEANLTPYLLTLLRGETKYGSLKYLDQDALNIAFNMNNIYLAKDFDTIYTLKNE LHDRSHRKYQQTITDKTVLIHYTGITKPWHSWAGYPSASYFNIAREQSPWKKYPLKEART VAEMQKQYKHLFAHGEYIKGITSLIKYKLKK >gi|296918659|gb|GG773041.1| GENE 156 158926 - 159618 437 230 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4041 NR:ns ## KEGG: ECS88_4041 # Name: waaY # Def: lipopolysaccharide core biosynthesis protein # Organism: E.coli_S88 # Pathway: Lipopolysaccharide biosynthesis [PATH:ecz00540]; Metabolic pathways [PATH:ecz01100] # 1 230 1 230 230 423 100.0 1e-117 MITSIRYRGFSFYYKDNDNKYKEIFDEILAYNFKTVKVLRNIDDTKVSLIDTKYGRYVFK VFAPKTKRNERFLKSFVKGDYYQNLIVETDRVRSAGLTFPNDFYFLAERKIFNYASVFIM LIEYVEGVELNDMPIIPEDVKAEIKASMEKLHALNMLSGDPHRGNFIVSKDGVRIIDLSG KSCTAERKARDRLAMERHLGIANEIKDYGYYSVIYRTKLRKFIKKLKGKA >gi|296918659|gb|GG773041.1| GENE 157 159644 - 160672 632 342 aa, chain + ## HITS:1 COG:rfaJ KEGG:ns NR:ns ## COG: rfaJ COG1442 # Protein_GI_number: 16131497 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Escherichia coli K12 # 19 338 23 338 338 220 38.0 3e-57 MDLLAESITEVAVSGEIANTDRVLNIAYGIDRNFLFGAAVSMQSVVMHNPDLAVKFHLFT DYIDEDYLQRVNAFTSKNANVEVRIYKVSSAFIDIFPSLKQWSYATFFRLVAFQYLSETI ENLLYIDADVICKGSLAGLLDINFDGDKFAAVIKDVPFMQEKPAKRLAIEGLPGNYFNAG VVYLQLEAWAKNDFMNKAIAMLASDPQHTKYKCLDQDILNILFFSHCIFISGDYDCFYGI DYELKNKSDEDYKKTITDDTKLIHYVGVTKPWNDWTNYPCQKYFNEAYQVSCWNDVAFIP ATNEKQYQVKYQHAKKNGDTFNAFIYFIKFKLNKYKRKLFGQ >gi|296918659|gb|GG773041.1| GENE 158 160754 - 161737 6 327 aa, chain + ## HITS:1 COG:BS_yveT KEGG:ns NR:ns ## COG: BS_yveT COG0463 # Protein_GI_number: 16080481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 6 208 3 214 344 116 32.0 6e-26 MSNDYPLVSIIIPTYNSSDYITETLTKLEKQTYPNFEIVIVNDGSKDNTSSVLREYGLTH SRLIIINKENGGVSSARNTGIRKAQGQFICFMDDDDEIDPNYLLKMYSRQHETGGDAIYC GLYGHHIKNGVTYSPINTDFNEGSLLFDFFYKKVRFHIGCLFIRKQLLEDNNLFFDEDLR LGEDLDFIYRLLITCDMYAVPYYMYKHNYRENSLMNSCRTITHYRHESFAHERIYSSVMQ LYKGNRKEEIHTLLSKNRTYHKTRYLWNVLLNGDFELLNQLVESNEKELKDCNLLGKRDK RRAKILASKNYILWRMVRLVNRKKNKR >gi|296918659|gb|GG773041.1| GENE 159 162566 - 163036 75 156 aa, chain + ## HITS:1 COG:rfaL KEGG:ns NR:ns ## COG: rfaL COG3307 # Protein_GI_number: 16131493 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Escherichia coli K12 # 2 141 267 408 419 78 38.0 4e-15 MNDLNRDLVNYSHDNTRTSVGARLAMYEVGLKTYSPIGQSLEKRAEKIHELEEKEPRLSG ALPFVDSHLHNDLIDTLSTRGIPGVALTILAFSAIFIYALRTAKEPYILILLFSLLVVGL SDVILFSKPVPTAVFVTIILLCAYFKVQSDQCLLDK >gi|296918659|gb|GG773041.1| GENE 160 163106 - 164086 831 326 aa, chain - ## HITS:1 COG:rfaC KEGG:ns NR:ns ## COG: rfaC COG0859 # Protein_GI_number: 16131492 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 1 312 1 312 319 605 96.0 1e-173 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIR RWRKAWFSAPIKAERKAFREALQAKNYDAVIDAQGLVKSAALVTRLAHGVKHGMDWQTAR EPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLPTDAGEY AVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLP KMSLEGVARVLAGAKFIVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP GNELSQLTANAVKQFIEENAEKAAMI >gi|296918659|gb|GG773041.1| GENE 161 164090 - 165136 904 348 aa, chain - ## HITS:1 COG:rfaF KEGG:ns NR:ns ## COG: rfaF COG0859 # Protein_GI_number: 16131491 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 1 348 1 348 348 711 99.0 0 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG HGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGIPHRTGWRGEMRYGLLNDV RVLDKEAWPLMVERYVALAYDKGIMRTAQDLPQPLLWPQLQVSEGEKSYTCNQFSLSSER PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQ AWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSH KARVIRLITGYHKVRKGDAAEGYHQSLIDITPQRVLEELNALLLQEEA >gi|296918659|gb|GG773041.1| GENE 162 165146 - 166078 1131 310 aa, chain - ## HITS:1 COG:ECs4497 KEGG:ns NR:ns ## COG: ECs4497 COG0451 # Protein_GI_number: 15833751 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 621 99.0 1e-178 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLIQI MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT EYMAWLNRDA >gi|296918659|gb|GG773041.1| GENE 163 166292 - 167488 1576 398 aa, chain + ## HITS:1 COG:ECs4495 KEGG:ns NR:ns ## COG: ECs4495 COG0156 # Protein_GI_number: 15833749 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Escherichia coli O157:H7 # 1 398 1 398 398 772 99.0 0 MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPD LIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFE TLLSAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIAT DGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITG TLGKALGGASGGYTAGRKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRD RLWANARQFREQMSAAGFTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVV PKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGVIA >gi|296918659|gb|GG773041.1| GENE 164 167498 - 168523 1099 341 aa, chain + ## HITS:1 COG:tdh KEGG:ns NR:ns ## COG: tdh COG1063 # Protein_GI_number: 16131487 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 341 1 341 341 707 99.0 0 MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMV VGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGC FAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAA AVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMTELGMTEGFDVGLEMS GAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAA LIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSGKVILSWD >gi|296918659|gb|GG773041.1| GENE 165 168796 - 169830 486 344 aa, chain + ## HITS:1 COG:yibD KEGG:ns NR:ns ## COG: yibD COG0463 # Protein_GI_number: 16131486 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 344 1 344 344 680 98.0 0 MMNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDGSTDNSVEIAKHYAENY PHVRLLHQANSGASVARNRGIEVATGKYVAFVDADDEVYPTMYETLMTMALEDDLDVAQC NADWCFRETGETWQSIPTDRLRSTGVLTGPDWLRMGLSSRRWTHVVWMGVYRRDVIVKNN IKFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLHNTSVSRLHRQGNKNLNYQRHYI KITRLLEKLNRNYADKITIYPEFHQQITYEALRVCHAVRKEPDIITRQRMIAEIFTSGMY KRLITNVRSVKVGYQALLWSFRLWQWRDKTRSHHRITRSAFNLR >gi|296918659|gb|GG773041.1| GENE 166 169817 - 170776 723 319 aa, chain - ## HITS:1 COG:ECs4492 KEGG:ns NR:ns ## COG: ECs4492 COG2861 # Protein_GI_number: 15833746 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 43 319 1 277 277 521 97.0 1e-148 MFPFRRNVLAFAALLALSSPVIAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPH AREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGI NNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDD SQNEADIRMQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPPDITLVKASSLLNE PQVDTSTPPKNTVPDTPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQH QWQGWGKQPESAKLNASAN >gi|296918659|gb|GG773041.1| GENE 167 170780 - 172039 1294 419 aa, chain - ## HITS:1 COG:ECs4491 KEGG:ns NR:ns ## COG: ECs4491 COG4942 # Protein_GI_number: 15833745 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Escherichia coli O157:H7 # 1 419 9 427 427 601 99.0 1e-171 MTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADERDQLKSIQADIAAKERAVRQKQQQ RASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQ LDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAQLKQTREEVAMQRAEL EEKQSEQQTLLYEQRAQQAKLTQALSERKKTLAGLESSIQQGQQQLSELRANESRLRNSI ARAEAAAKARAEREAREAQAVRDRQKEATRKGTTYKPTESEKSLMSRTGGLGAPRGQAFW PVRGPTLHRYGEQLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGK GDMSLYGYNQSALVSVGSQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR >gi|296918659|gb|GG773041.1| GENE 168 172073 - 173617 1771 514 aa, chain - ## HITS:1 COG:gpmI KEGG:ns NR:ns ## COG: gpmI COG0696 # Protein_GI_number: 16131483 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Escherichia coli K12 # 1 514 1 514 514 1007 99.0 0 MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQ MGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLS AGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAALGKGR VASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADTAVAGLQAAYARDENDEFVKATV IRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAA DIKTAVAYPPASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILI NSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEA LDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKA VEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE >gi|296918659|gb|GG773041.1| GENE 169 173862 - 174293 411 143 aa, chain + ## HITS:1 COG:ECs4489 KEGG:ns NR:ns ## COG: ECs4489 COG0607 # Protein_GI_number: 15833743 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 276 100.0 6e-75 MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLR QRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDGSGMQCQEPANALTKAGFA QVFVLKEGVAGWAGENLPLVRGK >gi|296918659|gb|GG773041.1| GENE 170 174434 - 174685 350 83 aa, chain + ## HITS:1 COG:ECs4488 KEGG:ns NR:ns ## COG: ECs4488 COG0695 # Protein_GI_number: 15833742 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Escherichia coli O157:H7 # 1 83 1 83 83 173 100.0 9e-44 MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDA QHIGGCDDLYALDARGGLDPLLK >gi|296918659|gb|GG773041.1| GENE 171 174749 - 175216 508 155 aa, chain + ## HITS:1 COG:ECs4487 KEGG:ns NR:ns ## COG: ECs4487 COG1952 # Protein_GI_number: 15833741 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 308 99.0 2e-84 MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDLDTASTQLADDVYEVVL RVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYCPNILFPYARECITSMVSR GTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA >gi|296918659|gb|GG773041.1| GENE 172 175216 - 176235 985 339 aa, chain + ## HITS:1 COG:ECs4486 KEGG:ns NR:ns ## COG: ECs4486 COG0240 # Protein_GI_number: 15833740 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 339 1 339 339 664 100.0 0 MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATLERDRCNAAFLPDVPFP DTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLEAETGRLL QDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTDQTFADDLQQLLHCGKSFRVY SNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMSRLGAALGADPATF MGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQEKIGQVVEGYRNTKEVRELAHRF GVEMPITEEIYQVLYCGKNAREAALTLLGRARKDERSSH >gi|296918659|gb|GG773041.1| GENE 173 176315 - 177136 884 273 aa, chain + ## HITS:1 COG:ECs4485 KEGG:ns NR:ns ## COG: ECs4485 COG1045 # Protein_GI_number: 15833739 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Escherichia coli O157:H7 # 1 273 1 273 273 551 100.0 1e-157 MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPA IAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWL WNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSV TLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVP ARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI >gi|296918659|gb|GG773041.1| GENE 174 177191 - 177664 467 157 aa, chain - ## HITS:1 COG:yibK KEGG:ns NR:ns ## COG: yibK COG0219 # Protein_GI_number: 16131477 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Escherichia coli K12 # 1 157 1 157 157 323 100.0 7e-89 MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRH HDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALPAEQKI RIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRD >gi|296918659|gb|GG773041.1| GENE 175 177712 - 178902 1433 396 aa, chain - ## HITS:1 COG:lldD KEGG:ns NR:ns ## COG: lldD COG1304 # Protein_GI_number: 16131476 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Escherichia coli K12 # 1 396 1 396 396 776 99.0 0 MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSL ETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAI KRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMR RYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWI RDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGD IAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMT LTGAKSISEITQDSLVQVLGKELPAALAPMAKGNAA >gi|296918659|gb|GG773041.1| GENE 176 178899 - 179675 651 258 aa, chain - ## HITS:1 COG:lldR KEGG:ns NR:ns ## COG: lldR COG2186 # Protein_GI_number: 16131475 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 258 1 258 258 484 98.0 1e-137 MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGV LLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDILEARYAIEASTAWHAAMRA TPGEKEKIQLCFEATLSEDPDLASQADVRFHLAIAEASHNIVLLQTMRGFFDVLQSSVKH SRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAMMAHLSFVHTTMKRFDEDQARHA RITRLPGDHNEHSREKNA >gi|296918659|gb|GG773041.1| GENE 177 179675 - 181330 1788 551 aa, chain - ## HITS:1 COG:ECs4481 KEGG:ns NR:ns ## COG: ECs4481 COG1620 # Protein_GI_number: 15833735 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Escherichia coli O157:H7 # 1 551 1 551 551 929 100.0 0 MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAASWTVAIALAVALLFYKM PVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDIIRSSILSITPDQRLQMLI VGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLCLIVNTAPVAFGAMGIPILVA GQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWRGIKETWPAVVVAGGSFAIAQYL SSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFRFGDLGASQVDMTLAHTGYTAGQVL RAWTPFLFLTATVTLWSIPPFKALFASGGALYEWVINIPVPYLDKLVARMPPVVSEATAY AAVFKFDWFSATGTAILFAALLSIVWLKMKPSDAISTFGSTLKELALPIYSIGMVLAFAF ISNYSGLSSTLALALAHTGHAFTFFSPFLGWLGVFLTGSDTSSNALFAALQATAAQQIGV SDLLLVAANTTGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSLIFTCMVGVITT LQAYVLTWMIP >gi|296918659|gb|GG773041.1| GENE 178 181740 - 186491 4010 1583 aa, chain - ## HITS:1 COG:ECs4480 KEGG:ns NR:ns ## COG: ECs4480 COG5295 # Protein_GI_number: 15833734 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 1 1583 1 1588 1588 1526 75.0 0 MNKIFKVIWNPATGSYTVASETAKSRGKKSGRSKLLISALVAGGLLSSFSVWANAGNDDG QGIGTGTGWVAIGESAKATAYTDSNGASTAVGYKSNAQGVWSSAIGALTSALGDSSMAFG VNAVSTGQRSIAMGASSSSLGEYSIALGRYASSGGMFSLAQGDRSNAAGLNATAVGSNSN AAGAKAIALGNAAKATEIMSIALGDTANASKEYSMALGVSSAASAANAIAVGRNSAAAGV DSLALGRLSVASAANAIAMGAESEAAENATAIGNNAHAKGVNSIAMGSGSIADKVNTIAL GNGSQSLADNAIAIGQGNKANGTDAIALGNASLSSGLNSIALGKTSVVTGDNSLALGSNT NANGINSVALGADSIADQDNSVSVGSSSLQRKIVNVKNGAIKADSHDAINGSQLYAISDS IAKRLGGGSSVNPDDGTVNAPTYNLKNGNKNNVGSALTVLDENTLQWDQIKGKYSAVHGS STTSVITDVANGTISAASKDAVNGSQLYDLQQDALLWNGTAFSAAHGTEATSKITNVTAG NLTASSTDAVNGSQLKTTNDNVTTNTTNIATNTTNITNLTDAVDSLGDDSLLWNKTAGAF SAAHGTDATSKITNVKAGDLTAGSTDAVNGSQLKTTNDNVTTNTTNIATNTTNITNLTDS VGDLKDDSLLWNKAAGAFSAAHGTEATSKITNLLAGKISSNSTDAINGSQLYGVADSFTS YLGGGADISDTGVLSGPTYTIGGTDYTNVGDALAAINTSFSTSLGDALLWDATAGKFSAK HGINNAPSVITDVANGAVSSTSSDAINGSQLYGVSDYIADALGGNAVVNTDGSITTPTYA IAGGSYNNVGDALEAIDTTLDDALLWDTTANGGNGAFSAAHGKDKTASVITNVANGAVSA TSSDAINGSQLYSTNKYIADALGGDAEVNADGTITAPTYTIANTDYNNVGEALDALDNNA LLWDEDAGAYNASHDGNASKITNVAAGDLSTTSTDAVNGSQLNATNILVTQNSQMINQLA GNTSETYIEENGAGINYVRTNDTGLTFTDASAAGIGSTAVGYNTVAKGDSSVAMGYNSFA KGDSSVAIGQGSYSGVDTGIALGSSSVSSRVIVKGSRNTSVSEEGVVIGYDTTDGELLGA LSIGDDGKYRQIINVADGSEAHDAVTVRQLQNAIGAVATTPTKYYHANSTAEDSLAVGED SLAMGAKTIVNGNAGIGIGLNTLVLADAINGIAIGSNARANHADSIAMGNGSQTTRGAQT NYTAYNMDAPQNSVGEFSVGSEDGQRQITNVAAGSADTDAVNVGQLKVTDAQVSQNTQSI TNLNTQVTNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGADANAQGKDSVAIGSGSIAAA DNSVALGTGSVADEENTISVGSSTNQRRITNVAAGVNATDAVNVSQLKSSEAGGVRYDTK ADGSIDYSNITLGGGNSGTTRISNVSAGVNNNDAVNYAQLKQSVQETKQYTDQRMVEMDN KLSKTESKLSGGIASAMAMTGLPQAYTPGASMASIGGGTYNGESAVALGVSMVSANGRWV YKLQGSTNSQGEYSAALGAGIQW >gi|296918659|gb|GG773041.1| GENE 179 186535 - 186984 189 149 aa, chain - ## HITS:1 COG:no KEGG:ECP_3702 NR:ns ## KEGG: ECP_3702 # Name: not_defined # Def: protein of unknown function (DUF3251); region: DUF3251; cl08186 # Organism: E.coli_536 # Pathway: not_defined # 1 149 79 227 227 282 99.0 3e-75 MVKAVKDKQDEFVFTEFNPAQTQYFILNNGSVGLAGKILSIDAVENGSVIRISLVNLLSV PVSNMGFYATWGGEKPTDINALAKWQQLLFSTSMNSSLKLLPGQWQDINLTLKGVSPNNL KYLKLAINMANIQFDRLQPAESPQRKNKK >gi|296918659|gb|GG773041.1| GENE 180 187060 - 187218 171 52 aa, chain - ## HITS:1 COG:no KEGG:c4423 NR:ns ## KEGG: c4423 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 52 1 52 227 89 100.0 5e-17 MNLKKTLLSVLMILQLCLLVGCDYIEKASKVDDLVTQQELQKSKIEALEKQQ >gi|296918659|gb|GG773041.1| GENE 181 187777 - 188139 520 120 aa, chain - ## HITS:1 COG:no KEGG:ECDH10B_3784 NR:ns ## KEGG: ECDH10B_3784 # Name: yibL # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 120 1 120 120 167 100.0 1e-40 MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKL SKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTALGREMGLQEMTGFSKTAF >gi|296918659|gb|GG773041.1| GENE 182 188423 - 188632 276 69 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4015 NR:ns ## KEGG: ECS88_4015 # Name: yibT # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 69 1 69 69 118 100.0 7e-26 MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPDESVPLYLQRLEYYRQL YRPKQVEEK >gi|296918659|gb|GG773041.1| GENE 183 188820 - 189269 407 149 aa, chain - ## HITS:1 COG:mtlR KEGG:ns NR:ns ## COG: mtlR COG3722 # Protein_GI_number: 16131472 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 146 1 146 195 280 98.0 7e-76 MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNLL VLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVINRQEYEDAELLMALREEL NHDGNEYAFTDDEILGPFGELHCVGGGGS >gi|296918659|gb|GG773041.1| GENE 184 189269 - 190417 1526 382 aa, chain - ## HITS:1 COG:mtlD KEGG:ns NR:ns ## COG: mtlD COG0246 # Protein_GI_number: 16131471 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli K12 # 1 382 1 382 382 727 98.0 0 MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTV SGVDAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNIIAC ENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRIVPPSASATNDPLEVTVETFS EWIVDKTQFKGTLPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQTIRDAIL DEKIRAVVKGAMEESGAVLIKRYDFDADKHAAYIQKILGRFENPYLKDDVERVGRQPLRK LSAGDRLIKPLLGTLEYGLPHKNLIEGIAAAMHFRSEDDPQAQELAALIADKGPQAALAQ ISGLDANSEVVSEAVTAYKAMQ >gi|296918659|gb|GG773041.1| GENE 185 190736 - 192649 2671 637 aa, chain - ## HITS:1 COG:ECs4475_1 KEGG:ns NR:ns ## COG: ECs4475_1 COG2213 # Protein_GI_number: 15833729 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Escherichia coli O157:H7 # 1 492 1 492 492 924 99.0 0 MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLPNETLAKLVGPMITYLL PLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMIAGPLGGWCIKHFDRWVDG KIKSGFEMLVNNFSAGIIGMILAILAFLGIGPVVEALSKMLAAGVNFMVVHDMLPLASIF VEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIEANPGPGMGVLLAYMFFGRGSAK QSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILGGMTGVFTLTILGGGLVSPASPGSI LAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILLKTSKVKEEDDIEAATRRMQDMKAESK GASPLSAGDVTNDLSHVRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISVTNSAINNL PPDVDLVITHRDLTERAMRQVPQAQHISLTNFLDSGLYTSLTERLVAAQRHTENEVKVKD SLKDSFDDSSANLFKLGAENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDREK LTPTYLGESIAVPHGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEH IQVITSLTNALDDESVIERLAHTTSVDEVLELLAGRK >gi|296918659|gb|GG773041.1| GENE 186 193184 - 193546 279 120 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_3931 NR:ns ## KEGG: EcSMS35_3931 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 120 35 154 154 230 96.0 1e-59 MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAIHTAGWVSLFTLHVIWP FLWIWATLYQPERGWGMQSHVTPQEKTTDAEIAALSDRISRLEHQLAAEKKTDYSTFPEI >gi|296918659|gb|GG773041.1| GENE 187 193549 - 194685 910 378 aa, chain + ## HITS:1 COG:ECs4473 KEGG:ns NR:ns ## COG: ECs4473 COG1566 # Protein_GI_number: 15833727 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 718 99.0 0 MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVRGLILLMNYNHPYTFTAQKA VIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTL RAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKG SVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTY AAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPV VPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPNADIDALPDGIYAQVAVYSDHFSHVSVM RKVLLRMTSWMHYLYLDH >gi|296918659|gb|GG773041.1| GENE 188 194756 - 195364 722 202 aa, chain + ## HITS:1 COG:yibF KEGG:ns NR:ns ## COG: yibF COG0625 # Protein_GI_number: 16131463 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 202 1 202 202 401 100.0 1e-112 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECW FDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSE DELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPH LVKLVENLFSRESFARTEPPKA >gi|296918659|gb|GG773041.1| GENE 189 195462 - 196853 1373 463 aa, chain + ## HITS:1 COG:ECs4468 KEGG:ns NR:ns ## COG: ECs4468 COG1921 # Protein_GI_number: 15833722 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 840 99.0 0 MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQMLDEAREVIRDSQTLPAW CENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAEAAVEAVTKAMRSPVTLEY DLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEI GGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNENTALLMKVHTSNYSIQGFTKAID EAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEPMPQELIAAGVSLVSFSGDKLLGGP QAGIIVGKKEMIARLQSHPLKRALRTDKMTLAALEATLRLYLHPEALSEKLPTLRLLTRS AEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLSQIGSGSLPVDRLPSAALTFTPHDGRGSH LESLAARWRELPVPVIGRIYDGRLWLDLRCLEDEQRFLEMLLK >gi|296918659|gb|GG773041.1| GENE 190 196850 - 198694 1854 614 aa, chain + ## HITS:1 COG:selB KEGG:ns NR:ns ## COG: selB COG3276 # Protein_GI_number: 16131461 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Escherichia coli K12 # 1 614 1 614 614 1212 99.0 0 MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPG HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEA RVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREHLLQLPEREHASQHSFRLAID RAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETAHAGQRIALN IAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLL EDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLA RAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQ RKILDTLATYHEQHRDEPGPGRERLRRMALPMEDDALVLLLIEKMRESGDIHSHHGWLHL PDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIV KDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRG NDHLLRDALLFPEK >gi|296918659|gb|GG773041.1| GENE 191 198885 - 200036 1247 383 aa, chain + ## HITS:1 COG:ECs4466 KEGG:ns NR:ns ## COG: ECs4466 COG1454 # Protein_GI_number: 15833720 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 383 1 383 383 703 98.0 0 MAASTFFIPSVNVIGADSLNDAMNMMADYGFTRTLIVTDNMLTKLGMAGDVQKALEERNI FSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHDCAKGIALVAANGGDIRDY EGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIKMAIVDKHVTPLLSVNDSSLM IGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALKAVTMIAENLPLAVEDGSNAKAR EAMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYNLPHGVCNAVLLPHVQVFNSKVAAARL RDCAAAMGVNVTGKNDAEGAEACINAIRELAKKVDIPAGLRDLNVKEEDFAVLATNALKD ACGFTNPIQATHEEIVAIYRAAM >gi|296918659|gb|GG773041.1| GENE 192 200166 - 201461 937 431 aa, chain + ## HITS:1 COG:ECs4465 KEGG:ns NR:ns ## COG: ECs4465 COG3177 # Protein_GI_number: 15833719 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 431 1 431 431 852 97.0 0 MAIKSPPGLIPLSHLSGEELLAHLRFNRVTDEKGRYLPFDELQYRIKKGENVDVAWTLTR LARNAAIQRINYCNEAGEQAGFNITPVIAEACELVDKRATALALKDQTERLRGAGAELSQ LRLEEPITSSQLEGANTTTLVARKMLETGRSPRTEDEHMIAGNARLMAEIPHLLAEPLTP ALIRQLHAIGMGGINDAKYRPGEFRETDDVVIADYDGNIVHQPSAAALLPERLEKVCQWL NSHEGYIHPLVRACILHFMLAHEHPFRDGNGRTSRALFYWYMLKSGYDVFKYISISSLLH AAPVKYAASYQYTESDGMDLTYFLEYQAGVIKRALQNWQQHIDEITQRSAKLDSVLFSSG VLKRLNPRQVTLLNVMLANPGKEYTVAEISVSLSVSDNTARTDLRTIVKEGFAQEKRINN QQAVYVAHYPL >gi|296918659|gb|GG773041.1| GENE 193 201608 - 203146 1892 512 aa, chain + ## HITS:1 COG:aldB KEGG:ns NR:ns ## COG: aldB COG1012 # Protein_GI_number: 16131459 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 512 31 542 542 1071 99.0 0 MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQNLTPVTGQLLCEVASSG KRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETS AADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEPLGVVGQIIPWNFPLLMASWK MAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGVVNVVNGAGGEIGEYLATSKRIA KVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFA FNQGEVCTCPSRALVQESIYERFMERAIRRVESIRSGNPLDSVTQMGAQVSHGQLETILN YIDIGKKEGADVLTGGRRKLLEGELKDGYYLEPTILFGQNNMRVFQEEIFGPVLAVTTFK TMEEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQS GIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF >gi|296918659|gb|GG773041.1| GENE 194 203193 - 203888 560 231 aa, chain - ## HITS:1 COG:sgbE KEGG:ns NR:ns ## COG: sgbE COG0235 # Protein_GI_number: 16131454 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 231 1 231 231 453 96.0 1e-128 MLEQLKADVLAANLALPVHHLVTFTWGNVSAIDETRQWMVIKPSGVEYEVMTADDMVVVE IASGKVVEGSKKPSSDTPTHLALYRRFAEIGGIVHTHSRHATIWSQAGLDLPAWGTTHAD YFYGAIPCTRLMTAEEINGEYEYQTGEVIIKTFEERGLNPAQIPAVLVHSHGPFAWGKNA ADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKHYLRKHGANAYYGQ >gi|296918659|gb|GG773041.1| GENE 195 203882 - 204742 956 286 aa, chain - ## HITS:1 COG:sgbU KEGG:ns NR:ns ## COG: sgbU COG3623 # Protein_GI_number: 16131453 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli K12 # 1 286 12 297 297 560 96.0 1e-159 MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRASLVT AMIETGVAIPSMCLSAHRRFPFGSRDDAVRQRAREIMSKAIRLARDLGIRTIQLAGYDVY YEDHDEGTQQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWKKWDEMLASPWFTV YPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTEHSPGQFRDVPFGEGCVDFVGIF KTLHELNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC >gi|296918659|gb|GG773041.1| GENE 196 204735 - 205397 793 220 aa, chain - ## HITS:1 COG:sgbH KEGG:ns NR:ns ## COG: sgbH COG0269 # Protein_GI_number: 16131452 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Escherichia coli K12 # 1 220 1 220 220 402 98.0 1e-112 MSRPLLQLALDHSSLEAAQRDVTRLKDSVDIVEAGTILCLNEGLGAVKALREQCPDKIIV ADWKVADAGETLAQQAFGAGANWMTIICAAPLATVEKGHAMAQRCGGEIQIELFGNWTLD DARDWHRIGVRQAIYHRGRDAQASGQQWGEADLARMKALSDIGLELSITGGITPADLPLF KEIRVKAFIAGRALAGAANPAQVAGDFHAQIDSIWGGKRA >gi|296918659|gb|GG773041.1| GENE 197 205394 - 206890 1347 498 aa, chain - ## HITS:1 COG:lyxK KEGG:ns NR:ns ## COG: lyxK COG1070 # Protein_GI_number: 16131451 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 498 1 498 498 1006 96.0 0 MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCTAVIR ALLTHSGVSGEQIVGIGISAQGKGLFLLDKNDKPLGNAILSSDRRAMEIVRRWQKDGIPE KLYPLTRQTLWTGHPVSLLRWLKEHKPERYAQIGCVMMTHDYLRWCLTGVKGCEESNISE SNLYNMGRGEYDPYLTDWLGIAEINHALPPVVGSAEICGEITAQTAVLTGLKAGTPVVGG LFDVVSTALCAGLEDEFTLNAVMGTWAVTSGITHGLRDGEAHPYVYGRYVNDGQFIVHEA SPTSSGNLEWFTAQWGEISFAEINQAVASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQ AIHTRAHLLQAIYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAHSDVWMQMLADVSGLR IELPQVEETGCFGAALAARVGTGVYRDFSEAQRDLRHPVRTLLPDMAAHQLYQQKYQRYQ HLITALQGYHARIKEHTL >gi|296918659|gb|GG773041.1| GENE 198 206894 - 207880 371 328 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|239995924|ref|ZP_04716448.1| ribosomal protein L22 [Alteromonas macleodii ATCC 27126] # 1 312 5 323 327 147 27 4e-34 MKLRSVTYALLIAGVATFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNELLQEKTKGELK LKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFTGLSPVINLLDVPFLFRDTAHAHKTL DGKVGDDLKVSLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAF KVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFYEVQKYLSLTHHAYSPLLVVI NKAKFDGLTPEFQQALISSAQEAGSYQRKLVAEDQQKIIDGMKEAGVEVITDLDRKAFSD ALGTQVRDMFVKDVPQGADLLKAVDEVQ >gi|296918659|gb|GG773041.1| GENE 199 207893 - 209170 783 425 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 [Algoriphagus sp. PR1] # 1 416 4 421 431 306 38 7e-82 MTILIFIVSLLGAIAIGVPIAWALLLCGISLMFWMDIFDVQILAQTLVNGADSFSLLAIP FFVLAGEIMNAGGLSQRIVDLPMKLVGHRPGGLGYVGVLAAMIMASLSGSAVADTAAVAA LLVPMMRQANYPVNRAAGLIGSGGIIAAIIPPSIPLIIFGVSSGLSISKLFMAGIAPGIM MGVTLMVTWWWQAKRLNLPCQPKASLREVWQSLVSGIWALFLPIIIIGGFRSGLFTPTEA GAVAAFYALFVSVVVYREMTFSTLYHVLINAAKTTSVVMFLVASAAVSAWLITIAELPMM VSELLQPLVDSPRLLFIVIMLAIMVISTVMDLTPTVLILTPVLMPLVKEAGIDPVYFGIM FIINCSISLITPPVGNVLNVVCGVAKLKFDDAVKGVAPYVMVLFMLLALFIFIPELITAP LKWMS >gi|296918659|gb|GG773041.1| GENE 200 209173 - 209640 305 155 aa, chain - ## HITS:1 COG:yiaM KEGG:ns NR:ns ## COG: yiaM COG3090 # Protein_GI_number: 16131448 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, small permease component # Organism: Escherichia coli K12 # 1 149 1 149 157 207 75.0 6e-54 MKRILEGILAIIIAILSCIIFINIILRYGFHTSILSIDELSRLLFVWLTFIGAIVAYMDN SHVQVTFLVEKLSPANQQRVSLLTHTLILLLCLGLAWGAIEKTAQDWSNLSPILGVPIGL MYAAAIPTSLIIALLELRHLYRQFTNTPSRNQQGA >gi|296918659|gb|GG773041.1| GENE 201 209754 - 210674 466 306 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3996 NR:ns ## KEGG: ECS88_3996 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 306 1 306 306 632 100.0 1e-180 MKTNNAGYIIGAYPCAPSFHQRSEEEEKDFWRQLSETPDILGLEQPCLENFHPLGDQWLL RHTPESWKFVVTAVMETMRRRSENSGFGLASSDEEQRQACVAYYRHLFNKINSLQANKVL ALELQAAPLATNPNVMQATDAFARSLKEIASWDWPCKLVLEHCDAMTSSSPRKGFLPLEN VLEVITDYDISICINWARSAIEGRNTTLPLTHTQMAKQAGKLGALMFSGTTLNGAYGEWQ DLHAPFAPFCAESLMTTDHVRELFNVAESSTLHFAGIKLLEINATADVHHRIEILRNGIH SLNESR >gi|296918659|gb|GG773041.1| GENE 202 210697 - 211161 444 154 aa, chain - ## HITS:1 COG:yiaL KEGG:ns NR:ns ## COG: yiaL COG2731 # Protein_GI_number: 16131447 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli K12 # 1 154 1 154 155 287 91.0 5e-78 MIFGHIAQPNPCRLPAAIEKALDFLRTTDFNALEPGVVEIDGKNIYAQIIDLTTREAVEN RPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGS YAIFFPQDVHRPACNKNATTAIRKIVVKVALAAL >gi|296918659|gb|GG773041.1| GENE 203 211173 - 212171 1067 332 aa, chain - ## HITS:1 COG:yiaK KEGG:ns NR:ns ## COG: yiaK COG2055 # Protein_GI_number: 16131446 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 1 332 1 332 332 671 99.0 0 MKVTFEQLKAAFNRVLISRGVDNETADACAEMFARTTESGVYSHGVNRFPRFIQQLENGD IIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAADHGIGLVALRNANHWMRG GSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLIVAIPSTPITMVDMSMSMFSY GMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRILPMGYWKGSGMSIVLDMIATLL SDGASVAEVTEDNSDEYGISQIFIAIEVDKLIDGPTRDAKLQRIMDYVTSAERADENQAI RLPGHEFTTLLAENRRNGITVDDSVWAKIQAL >gi|296918659|gb|GG773041.1| GENE 204 212372 - 213220 647 282 aa, chain + ## HITS:1 COG:yiaJ KEGG:ns NR:ns ## COG: yiaJ COG1414 # Protein_GI_number: 16131445 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 282 1 282 282 563 99.0 1e-160 MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVH RLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIHIAAPHLEALNIATGETIN FSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGHPDYVKSYWESHQ HEIQPLTRNTITELPAMFDELAHIRESGAAMDREENELGVSCIAVPVFDIHGRVPYAVSI SLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRDDQGAIT >gi|296918659|gb|GG773041.1| GENE 205 213322 - 213795 196 157 aa, chain + ## HITS:1 COG:ECs4456 KEGG:ns NR:ns ## COG: ECs4456 COG1142 # Protein_GI_number: 15833710 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 253 96.0 1e-67 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHTYTTAVACHQ CEDAPCANVCPVDAISREHGHIFVEQSRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDL CWHRATGPACVEACPTKALQCVDVEKVQRHRLRQQPV >gi|296918659|gb|GG773041.1| GENE 206 213947 - 215200 1269 417 aa, chain - ## HITS:1 COG:ECs4455 KEGG:ns NR:ns ## COG: ECs4455 COG3977 # Protein_GI_number: 15833709 # Func_class: E Amino acid transport and metabolism # Function: Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase # Organism: Escherichia coli O157:H7 # 1 417 1 417 417 872 99.0 0 MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLES GKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAGR RADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEET GMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPN IVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLR LSETVIKPFYYQRVQETIAIIRRYLPEDRCLIHKPEGAIFLWLWFKDLPITTEQLYQRLK ARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEAGVKILAEEIERAWAESH >gi|296918659|gb|GG773041.1| GENE 207 215378 - 217408 1725 676 aa, chain - ## HITS:1 COG:ECs4454 KEGG:ns NR:ns ## COG: ECs4454 COG0366 # Protein_GI_number: 15833708 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 676 1 676 676 1336 97.0 0 MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPKGTRPLTLNFDQQCWQP ADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQLDTRSGTPTLMISLQNTVEPVASLVRE CPKWDGLPLTLDVSATFAEGAAVRDYYSQQIAIVKNGQITLQPAATSNGLLLLERAETDT SAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQ LGVNALWISAPFEQIHGWVGGGTKGGFPPYAYHGYYTQDWTNLDANMGSEADLRTLVDSA HQRGIRILFDIVMNHTGYATLADMQEYQFGALYLSGDELKKTLGERWSDWKPAAGQTWHS FNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVF YKNKTDTHAKVIDGFTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAA LREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQ MDTTWQQMAEKLQDFNVLSYLSSHDTRLFREGGDKAAELLLLAPGAVQIFYGDESSRPFG PTGSDPLQGTRSDMNWQDVSGKSAASVAHWQKISQFRARHPAIGAGKQTTLSLKQGYGFV REHGDDKVLVIWAGQQ >gi|296918659|gb|GG773041.1| GENE 208 217980 - 218552 498 190 aa, chain + ## HITS:1 COG:ECs4453 KEGG:ns NR:ns ## COG: ECs4453 COG2992 # Protein_GI_number: 15833707 # Func_class: R General function prediction only # Function: Uncharacterized FlgJ-related protein # Organism: Escherichia coli O157:H7 # 1 190 85 274 274 348 100.0 4e-96 MPYITSQNAAITAERNWLISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLE RVDIIPTSMVATMAAAESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKE SVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQ DNQRLIAAHM >gi|296918659|gb|GG773041.1| GENE 209 218660 - 219838 1036 392 aa, chain - ## HITS:1 COG:xylR_1 KEGG:ns NR:ns ## COG: xylR_1 COG1609 # Protein_GI_number: 16131440 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 265 1 265 265 542 100.0 1e-154 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML >gi|296918659|gb|GG773041.1| GENE 210 219916 - 221097 1055 393 aa, chain - ## HITS:1 COG:ECs4451 KEGG:ns NR:ns ## COG: ECs4451 COG4214 # Protein_GI_number: 15833705 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, permease component # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 596 100.0 1e-170 MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFTWTTDGAYLSARNVSNL LRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICDVWLGWPLPLTIIVTLVLG LLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSAAMSQIGQSYLPAS TGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVVGRQALTAIIVLGAIWLLNDYRG VPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMV AIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNG MSMMDVPTFWQYIVKGAILLLAVWMDSATKRRS >gi|296918659|gb|GG773041.1| GENE 211 221075 - 222652 223 525 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 266 495 7 240 329 90 29 6e-17 MPRELIGLGGVVMPYLLEMKNITKTFGSVKAIDNVSLRLNAGEIVSLCGENGSGKSTLMK VLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLGNEI THNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDE PTASLTEQETSVLLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAG MSEGDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKRVNDVSFSLKRGE ILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQAIAQGIAMVPEDRKR DGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQLKVKTSSSDLAIGRLSG GNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEV LGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHVEKQSV >gi|296918659|gb|GG773041.1| GENE 212 222694 - 223686 988 330 aa, chain - ## HITS:1 COG:xylF KEGG:ns NR:ns ## COG: xylF COG4213 # Protein_GI_number: 16131437 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, periplasmic component # Organism: Escherichia coli K12 # 1 330 1 330 330 578 99.0 1e-165 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV PSRLLTPIDVNKNNIKDTVVKDGFHKESEL >gi|296918659|gb|GG773041.1| GENE 213 224052 - 225374 1383 440 aa, chain + ## HITS:1 COG:ECs4448 KEGG:ns NR:ns ## COG: ECs4448 COG2115 # Protein_GI_number: 15833702 # Func_class: G Carbohydrate transport and metabolism # Function: Xylose isomerase # Organism: Escherichia coli O157:H7 # 1 440 1 440 440 903 99.0 0 MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMF GVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFA QMVDVLAGKQEESGVKLLWGTANCFTNPRYGAGAATNPDPEVFSWAATQVVTAMEATHKL GGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK HQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRG DAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAM DTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHNLSPV HQSGRQEQLENLVNHYLFDK >gi|296918659|gb|GG773041.1| GENE 214 225446 - 226357 471 303 aa, chain + ## HITS:1 COG:xylB KEGG:ns NR:ns ## COG: xylB COG1070 # Protein_GI_number: 16131435 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 223 1 223 484 436 98.0 1e-122 MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALG VQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITG NLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVA KRDWSDLMLQACHLSRDQMPALYEGSEITGALLPEVAKAWGMAAGAGFAGGGGERGGGGG GGGGGGAPPPLKLRKRGVWRRCQLSQAVATMQLVRLVWEWLMLIRQCYRWGRRGSILLSA KGS >gi|296918659|gb|GG773041.1| GENE 215 226219 - 227010 410 263 aa, chain + ## HITS:1 COG:ECs4447 KEGG:ns NR:ns ## COG: ECs4447 COG1070 # Protein_GI_number: 15833701 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli O157:H7 # 1 263 222 484 484 481 98.0 1e-136 MAAVPVIAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHAL PQRWHLMSVMLSAASCLDWAAKLTGLSNVPALITAAQQADESAEPVWFLPYLSGERTPHN NPQAKGGFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEY WRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQR YAAYQPRRETFRRLYQQLLPLMA >gi|296918659|gb|GG773041.1| GENE 216 227179 - 227520 348 113 aa, chain + ## HITS:1 COG:yiaB KEGG:ns NR:ns ## COG: yiaB COG4682 # Protein_GI_number: 16131434 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 113 5 117 117 188 97.0 2e-48 MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLD DFFIHVCQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSA >gi|296918659|gb|GG773041.1| GENE 217 227566 - 228003 513 145 aa, chain + ## HITS:1 COG:ECs4445 KEGG:ns NR:ns ## COG: ECs4445 COG4682 # Protein_GI_number: 15833699 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 145 2 146 146 263 96.0 6e-71 MDNKISTYSPAFSIVSWVALIGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQK TVRDKYEGIPTTPIYYMTCLTVFIISVALLLVGLWNATLLLSEKGFYGLAFFLSLFGAVA VQKNIHDAGINPPKETQVTQEEYSE >gi|296918659|gb|GG773041.1| GENE 218 228045 - 229040 766 331 aa, chain - ## HITS:1 COG:ECs4444 KEGG:ns NR:ns ## COG: ECs4444 COG3274 # Protein_GI_number: 15833698 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 591 97.0 1e-169 MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPITWDIANVLNSASRVSVPLFFMI SGYLFFGERSAQSRHFLRIGLCLFFYSAIALLYIALFTSINVELALKNLLQKPVFYHLWF FFAIAVIYLVSPLIQVKNVGGKMLLVLMVVIGIIANPNTVPQKIDGFEWLPINLYINGDT FYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC GPMVFICAIALLTLVKNTLYTRTICGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPI LDIIWIFCATLAVSLLLSMLVQRIDRNRLVS >gi|296918659|gb|GG773041.1| GENE 219 229218 - 229514 264 98 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3978 NR:ns ## KEGG: ECS88_3978 # Name: ysaB # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 98 2 99 99 197 100.0 9e-50 MMNAFFPAMALIVLVGCSTPPPVQKAQRVKVDPLRSLNMEALCKDQAAKRYNTGEQKIDV TAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR >gi|296918659|gb|GG773041.1| GENE 220 229609 - 230520 1069 303 aa, chain + ## HITS:1 COG:ECs4443 KEGG:ns NR:ns ## COG: ECs4443 COG0752 # Protein_GI_number: 15833697 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 303 1 303 303 634 100.0 0 MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMAAAYVQ PSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDN WENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSV YDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPL PLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCN KDK >gi|296918659|gb|GG773041.1| GENE 221 230530 - 232599 2829 689 aa, chain + ## HITS:1 COG:ECs4442 KEGG:ns NR:ns ## COG: ECs4442 COG0751 # Protein_GI_number: 15833696 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Escherichia coli O157:H7 # 1 689 1 689 689 1325 100.0 0 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRA HVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGI QSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGN ADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGKLLPN FIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGT LRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHD GEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFAL RRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEG YTVDTIQAVLARRPTRPADFDARMKAVSHFRTLEAAAALAAANKRVSNILAKSDEVLSDR VNASTLKEPEEIKLAMQVVVLRDKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVD DKELRINRLTMLEKLRELFLRVADISLLQ >gi|296918659|gb|GG773041.1| GENE 222 232883 - 233095 119 70 aa, chain + ## HITS:1 COG:no KEGG:ECP_3660 NR:ns ## KEGG: ECP_3660 # Name: not_defined # Def: Hok/gef family; region: HOK_GEF; cl11494 # Organism: E.coli_536 # Pathway: not_defined # 1 70 1 70 70 124 100.0 1e-27 MHRHHKVSLLLVGNQHRGLGMPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYEL AAFLACKLKE >gi|296918659|gb|GG773041.1| GENE 223 233283 - 233495 298 70 aa, chain - ## HITS:1 COG:ECs4441 KEGG:ns NR:ns ## COG: ECs4441 COG1278 # Protein_GI_number: 15833695 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 122 100.0 1e-28 MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAK GPAAGNVTSL >gi|296918659|gb|GG773041.1| GENE 224 233776 - 234066 269 96 aa, chain - ## HITS:1 COG:ECs4440 KEGG:ns NR:ns ## COG: ECs4440 COG2944 # Protein_GI_number: 15833694 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 164 100.0 5e-41 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME >gi|296918659|gb|GG773041.1| GENE 225 234500 - 235210 754 236 aa, chain + ## HITS:1 COG:no KEGG:APECO1_2894 NR:ns ## KEGG: APECO1_2894 # Name: yiaF # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 236 41 276 276 432 100.0 1e-120 MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQK KQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV LAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVM VGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ >gi|296918659|gb|GG773041.1| GENE 226 235260 - 236234 866 324 aa, chain - ## HITS:1 COG:ECs4438 KEGG:ns NR:ns ## COG: ECs4438 COG1052 # Protein_GI_number: 15833692 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 324 5 328 328 645 100.0 0 MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVDAAL LEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVE VAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHH KEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPV VDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAAC AVDNLIDALQGKVEKNCVNPHVAD >gi|296918659|gb|GG773041.1| GENE 227 236338 - 236997 214 219 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 113 214 243 344 347 87 37 6e-16 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG KGALIGAAAGTALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGSHDLNMRLSQQRADSVASALITQG VDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL >gi|296918659|gb|GG773041.1| GENE 228 237150 - 239483 1807 777 aa, chain + ## HITS:1 COG:ECs4436 KEGG:ns NR:ns ## COG: ECs4436 COG0243 # Protein_GI_number: 15833690 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 39 777 1 739 739 1496 97.0 0 MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFP MVRKGFLASPENPQGIRGQDEFVRVSWDEALELIHHQHKRIREAYGPASIFAGSYGWRSN GVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSD VVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETIDFFGDKMEWVA PHMGTDVALMLGIAHTLVENGWHDEAFLARCTTGYAVFASYLLGESDGIAKNAEWAAEIC GVGAAKIRELAAIFHQNTTMLMAGWGMQRQQFGEQKHWMLVTLAAMLGQIGTPGGGFGLS YHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMDRHFPD IRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDL TMTGDYSNQHLVPMKQVVPPRYEARNDFDVFADLSERWQKGGYARFTEGKSELQWLETFY NVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERFIRFADFRRDPQAHPLKTASGKI EIFSQRIADYAYPDCPGHPMWLAPDEWQGSAEPEQLQVLSAHPAHRLHSQLNYSSLRELY AVANREPVTIHPDDAQTRGIQDGDTVRLWNSRGQILAGAVISEGIKPGVICIHEGAWPDL DLTAGGICKNGAVNVLTKDLPSSRLGNGCAGNTALAWLEKYTGSELTLTAFEPPASS >gi|296918659|gb|GG773041.1| GENE 229 239452 - 239892 411 146 aa, chain - ## HITS:1 COG:yiaC KEGG:ns NR:ns ## COG: yiaC COG0454 # Protein_GI_number: 16131421 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 146 1 146 146 276 95.0 7e-75 MIREVQRSELPAILQLWLESTTWGHPFIKSSYWRDCIPLVRDAYLANAQNWVWEEDGKLL GFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHLMLEVYQKNQPAIDFYHAQGF HIVDCAWQDETQLPTWIMSWPVVQTL >gi|296918659|gb|GG773041.1| GENE 230 239889 - 240452 356 187 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 1 181 1 181 185 141 38 2e-32 MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACF HQFDPVKVAAMQEEDIERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFADFVWSFV NHQPQVTQATTLSEIPTSTPASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGCC CHPGNKP >gi|296918659|gb|GG773041.1| GENE 231 240610 - 241308 582 232 aa, chain + ## HITS:1 COG:ECs4433 KEGG:ns NR:ns ## COG: ECs4433 COG5571 # Protein_GI_number: 15833687 # Func_class: N Cell motility # Function: Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion # Organism: Escherichia coli O157:H7 # 1 232 3 234 234 426 99.0 1e-119 MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGHSTERYTWDSDHQPDYND ILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAAFHYDGTTTSM YNEFGDSTTTLADPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRM TATNQNGNWLDVTVGADMLLNQNIAAYAALSQAENTTNNSDYLYTMGVSARF >gi|296918659|gb|GG773041.1| GENE 232 241537 - 242745 1614 402 aa, chain + ## HITS:1 COG:yhjX KEGG:ns NR:ns ## COG: yhjX COG0477 # Protein_GI_number: 16131418 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 402 1 402 402 674 98.0 0 MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLGAPVSQVAFSFGLLSLGLA ISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSNNLMMLWLSAGVLVGLADGAGYLL TLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTHLLETVGLEKTFVIWGAIVLVMIV FGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDI AQSLAHLDAISAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVIALVGMAALLFA PLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIA SLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHGSL >gi|296918659|gb|GG773041.1| GENE 233 243130 - 244821 1333 563 aa, chain + ## HITS:1 COG:yhjW KEGG:ns NR:ns ## COG: yhjW COG2194 # Protein_GI_number: 16131417 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 563 12 574 574 1154 99.0 0 MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWKGISAVVELAATVLVTF FLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYGIIASVMTTDIDLSKEVVG LNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRSLAVVVLAGIMVWAPIRLLDI QQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAWARVDESSDNNSLLNPAKKFTYQ APQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKLAQEKNLAAFRGYSCDTATKLSLRC MFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDLYAMQSEMWFYSNTMADNIAYREQIGA EPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLIILHTKGSHFNYTQRYPRSFAQWKPECIG VDSGCTKAQMINSYDNSVTYVDHFISSVIDQVRDKKAIVFYAADHGESINEREHLHGTPR ELAPPEQFRVPMMVWMSDKYLENPVNAQAFAQLKKEADMKVPRRHVELYDTIMGCLGYTS PDGGINENNNWCHIPQAKEASAN >gi|296918659|gb|GG773041.1| GENE 234 245753 - 247360 2099 535 aa, chain + ## HITS:1 COG:dppA KEGG:ns NR:ns ## COG: dppA COG0747 # Protein_GI_number: 16131416 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 535 1 535 535 1089 99.0 0 MRISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPL YNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVF SFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAM DFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPKID TLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQ KKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAK ALLKEAGLEKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKR AKDGEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDH NKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE >gi|296918659|gb|GG773041.1| GENE 235 247350 - 247493 58 47 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_3864 NR:ns ## KEGG: EcSMS35_3864 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 47 1 47 47 75 97.0 9e-13 MTRSLELRVCIAHKSIPALVEQGMKYCCRMALHAEAQRHRVWLLIIR >gi|296918659|gb|GG773041.1| GENE 236 247511 - 248530 355 339 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 66 333 43 310 320 141 29 3e-32 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK >gi|296918659|gb|GG773041.1| GENE 237 248540 - 249442 1271 300 aa, chain + ## HITS:1 COG:ECs4422 KEGG:ns NR:ns ## COG: ECs4422 COG1173 # Protein_GI_number: 15833676 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 300 1 300 300 486 100.0 1e-137 MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAEQ FRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGVILG LIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIGNAALALTFVALPHYVRLT RAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFL GMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLKQ >gi|296918659|gb|GG773041.1| GENE 238 249453 - 250436 573 327 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 315 11 324 329 225 40 2e-57 MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYP GRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ GGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP TTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAE EPALNMLADGRQSKCHYPLDDAGRPTL >gi|296918659|gb|GG773041.1| GENE 239 250433 - 251437 796 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 328 2 329 329 311 47 2e-83 MSTHEATSQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCG KSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQ ILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDP DVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRC VEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCR RRFGPCIQLQPQLKDYGGQLVACFAVDQDENPQR >gi|296918659|gb|GG773041.1| GENE 240 251467 - 252738 1081 423 aa, chain - ## HITS:1 COG:ECs4419 KEGG:ns NR:ns ## COG: ECs4419 COG0814 # Protein_GI_number: 15833673 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 423 1 423 423 697 97.0 0 MQHNTLPKHDQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGLKGIWVFITAAIIAYPA TWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVVFDS ASYLKTFGLTDADLSQSLFYKVAIFAVLVAIASGGERLLFKISGPMVVVKVGIIVVFGFA MIPHWNFANITAFPQASDFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKREADKVLATRL ALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAFEQNISALALAAQVIPGHIIHITST VLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRIIDTRKINSRMLTLAICTFIVITLTIWV SFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKVSQLEKLRGFKAWMILLYGILLCLSPLLK LIE Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:47:51 2011 Seq name: gi|296918658|gb|GG773042.1| Escherichia coli MS 110-3 genomic scaffold Scfld673, whole genome shotgun sequence Length of sequence - 316025 bp Number of predicted genes - 291, with homology - 290 Number of transcription units - 137, operones - 68 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 94 - 666 619 ## COG0241 Histidinol phosphatase and related phosphatases - Prom 833 - 892 3.9 2 2 Op 1 32/0.000 + CDS 854 - 1885 1122 ## COG1135 ABC-type metal ion transport system, ATPase component 3 2 Op 2 22/0.000 + CDS 1878 - 2531 870 ## COG2011 ABC-type metal ion transport system, permease component 4 2 Op 3 . + CDS 2571 - 3386 1178 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 3421 - 3457 6.7 + Prom 3420 - 3479 1.8 5 3 Op 1 . + CDS 3504 - 3908 320 ## ECO103_0196 outer membrane lipoprotein 6 3 Op 2 6/0.156 + CDS 3905 - 4612 634 ## COG1720 Uncharacterized conserved protein + Term 4675 - 4705 2.7 7 4 Op 1 . + CDS 4723 - 6441 2137 ## COG0442 Prolyl-tRNA synthetase + Term 6447 - 6486 5.3 8 4 Op 2 . + CDS 6494 - 7318 383 ## APECO1_1794 hypothetical protein - Term 7332 - 7373 3.3 9 5 Op 1 4/0.511 - CDS 7474 - 8184 638 ## COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance 10 5 Op 2 5/0.289 - CDS 8198 - 8620 254 ## COG1186 Protein chain release factor B 11 5 Op 3 . - CDS 8617 - 9162 757 ## COG4681 Uncharacterized protein conserved in bacteria - Prom 9184 - 9243 1.8 12 6 Tu 1 . + CDS 9517 - 9777 274 ## COG4568 Transcriptional antiterminator + Term 9786 - 9830 6.6 - Term 9556 - 9614 1.3 13 7 Op 1 2/0.733 - CDS 9825 - 11123 1148 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Term 11136 - 11176 0.2 14 7 Op 2 1/0.889 - CDS 11188 - 11577 441 ## COG0346 Lactoylglutathione lyase and related lyases 15 7 Op 3 3/0.667 - CDS 11634 - 13775 1972 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 13796 - 13855 3.5 - Term 13824 - 13853 1.2 16 8 Op 1 7/0.089 - CDS 13873 - 14832 1351 ## COG0825 Acetyl-CoA carboxylase alpha subunit 17 8 Op 2 . - CDS 14845 - 15957 952 ## COG0587 DNA polymerase III, alpha subunit 18 8 Op 3 6/0.156 - CDS 15978 - 18350 2480 ## COG0587 DNA polymerase III, alpha subunit 19 8 Op 4 11/0.000 - CDS 18387 - 18983 685 ## COG0164 Ribonuclease HII 20 8 Op 5 11/0.000 - CDS 18980 - 20128 1095 ## COG0763 Lipid A disaccharide synthetase 21 8 Op 6 25/0.000 - CDS 20128 - 20916 753 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 22 8 Op 7 18/0.000 - CDS 20920 - 21375 485 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases - Prom 21402 - 21461 4.0 - Term 21402 - 21453 7.1 23 9 Op 1 15/0.000 - CDS 21480 - 22505 865 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 24 9 Op 2 17/0.000 - CDS 22509 - 22994 616 ## COG2825 Outer membrane protein - Prom 23047 - 23106 2.1 25 9 Op 3 18/0.000 - CDS 23116 - 25548 2674 ## COG4775 Outer membrane protein/protective antigen OMA87 26 9 Op 4 12/0.000 - CDS 25578 - 26930 986 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 27 9 Op 5 32/0.000 - CDS 26942 - 27691 670 ## COG0575 CDP-diglyceride synthetase 28 9 Op 6 7/0.089 - CDS 27812 - 28570 507 ## COG0020 Undecaprenyl pyrophosphate synthase - Prom 28693 - 28752 3.9 - Term 28625 - 28654 0.4 29 10 Op 1 8/0.067 - CDS 28759 - 29955 866 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase - Prom 29978 - 30037 2.1 30 10 Op 2 . - CDS 30047 - 30604 787 ## COG0233 Ribosome recycling factor - Prom 30681 - 30740 3.5 + Prom 30309 - 30368 2.1 31 11 Tu 1 . + CDS 30567 - 30764 90 ## ECIAI39_0174 hypothetical protein + Term 30810 - 30853 -0.3 - Term 30679 - 30736 8.2 32 12 Op 1 24/0.000 - CDS 30754 - 31479 1072 ## COG0528 Uridylate kinase - Prom 31522 - 31581 4.9 - Term 31582 - 31615 5.2 33 12 Op 2 38/0.000 - CDS 31626 - 32477 1001 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Prom 32503 - 32562 3.8 - Term 32527 - 32560 3.1 34 12 Op 3 . - CDS 32612 - 33535 1604 ## PROTEIN SUPPORTED gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 - Prom 33571 - 33630 3.4 + Prom 33530 - 33589 4.5 35 13 Tu 1 . + CDS 33705 - 34499 847 ## COG0024 Methionine aminopeptidase + Term 34578 - 34611 4.5 + Prom 34501 - 34560 62.5 36 14 Op 1 5/0.289 + CDS 34636 - 37308 2025 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase 37 14 Op 2 . + CDS 37339 - 38163 1027 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase + Term 38175 - 38208 4.8 + Prom 38199 - 38258 4.8 38 15 Tu 1 . + CDS 38475 - 38861 484 ## ECIAI1_0162 hypothetical protein + Term 38870 - 38914 2.1 - Term 38804 - 38838 -0.5 39 16 Tu 1 . - CDS 38915 - 40018 988 ## COG3835 Sugar diacid utilization regulator - Prom 40132 - 40191 3.6 - Term 40177 - 40212 6.5 40 17 Tu 1 . - CDS 40223 - 41647 1424 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 41696 - 41755 2.7 41 18 Tu 1 . - CDS 41777 - 43294 925 ## COG0232 dGTP triphosphohydrolase - Prom 43366 - 43425 2.0 + Prom 43295 - 43354 2.4 42 19 Op 1 5/0.289 + CDS 43378 - 44076 709 ## COG0775 Nucleoside phosphorylase 43 19 Op 2 6/0.156 + CDS 44069 - 44869 740 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 44 19 Op 3 . + CDS 44907 - 45530 672 ## COG2860 Predicted membrane protein - Term 45524 - 45570 1.3 45 20 Op 1 3/0.667 - CDS 45577 - 45921 473 ## COG0316 Uncharacterized conserved protein 46 20 Op 2 . - CDS 46003 - 47424 1528 ## COG0038 Chloride channel protein EriC - Prom 47599 - 47658 3.8 + Prom 47481 - 47540 5.4 47 21 Tu 1 . + CDS 47649 - 48929 1445 ## COG0001 Glutamate-1-semialdehyde aminotransferase 48 22 Op 1 33/0.000 - CDS 48967 - 50949 2017 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 49 22 Op 2 14/0.000 - CDS 50946 - 51836 884 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 50 22 Op 3 7/0.089 - CDS 51836 - 52633 194 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 51 22 Op 4 5/0.289 - CDS 52693 - 54936 2505 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 54957 - 55016 5.4 52 23 Op 1 3/0.667 - CDS 55156 - 57690 2674 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 53 23 Op 2 . - CDS 57784 - 60258 2265 ## COG1643 HrpA-like helicases + Prom 60206 - 60265 4.3 54 24 Op 1 3/0.667 + CDS 60287 - 60817 377 ## COG1514 2'-5' RNA ligase 55 24 Op 2 6/0.156 + CDS 60832 - 61536 348 ## COG1489 DNA-binding protein, stimulates sugar fermentation + Term 61601 - 61636 -0.1 + Prom 61601 - 61660 2.3 56 25 Op 1 3/0.667 + CDS 61714 - 62169 662 ## COG1734 DnaK suppressor protein 57 25 Op 2 1/0.889 + CDS 62206 - 63132 678 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Prom 63141 - 63200 3.5 58 26 Op 1 7/0.089 + CDS 63225 - 64589 1418 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 59 26 Op 2 3/0.667 + CDS 64586 - 65065 193 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 60 27 Tu 1 7/0.089 + CDS 65427 - 66017 740 ## COG3539 P pilus assembly protein, pilin FimA + Prom 66036 - 66095 7.9 61 28 Op 1 10/0.000 + CDS 66126 - 66866 431 ## COG3121 P pilus assembly protein, chaperone PapD 62 28 Op 2 6/0.156 + CDS 67012 - 69489 1602 ## COG3188 P pilus assembly protein, porin PapC 63 28 Op 3 . + CDS 69542 - 70072 280 ## COG3539 P pilus assembly protein, pilin FimA 64 28 Op 4 . + CDS 70087 - 70692 502 ## ECP_0147 hypothetical protein 65 28 Op 5 . + CDS 70719 - 71315 315 ## ECP_0146 fimbrial protein; region: fimbrial; cl01416 + Term 71435 - 71463 -0.6 + Prom 71692 - 71751 4.6 66 29 Tu 1 . + CDS 71956 - 72630 326 ## COG3539 P pilus assembly protein, pilin FimA + Prom 72640 - 72699 25.2 67 30 Op 1 19/0.000 + CDS 72768 - 73562 868 ## COG0413 Ketopantoate hydroxymethyltransferase 68 30 Op 2 . + CDS 73574 - 74425 1086 ## COG0414 Panthothenate synthetase + Term 74430 - 74472 10.2 69 31 Tu 1 . - CDS 74507 - 75391 738 ## COG5464 Uncharacterized conserved protein 70 32 Tu 1 . - CDS 75512 - 75715 59 ## UTI89_C0145 hypothetical protein + Prom 75546 - 75605 2.6 71 33 Tu 1 . + CDS 75665 - 76045 461 ## COG0853 Aspartate 1-decarboxylase - Term 75779 - 75820 1.4 72 34 Op 1 4/0.511 - CDS 75982 - 77289 651 ## COG0726 Predicted xylanase/chitin deacetylase - Term 77300 - 77339 1.9 73 34 Op 2 3/0.667 - CDS 77353 - 77793 295 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Term 77851 - 77890 6.6 74 35 Op 1 45/0.000 - CDS 77898 - 78668 813 ## COG0842 ABC-type multidrug transport system, permease component 75 35 Op 2 . - CDS 78665 - 79591 946 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 79630 - 79689 4.2 + Prom 79545 - 79604 5.4 76 36 Tu 1 . + CDS 79700 - 80362 571 ## COG0288 Carbonic anhydrase 77 37 Tu 1 . - CDS 80430 - 80966 800 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase - Prom 81105 - 81164 6.4 + Prom 81076 - 81135 3.7 78 38 Tu 1 . + CDS 81172 - 83562 2498 ## COG4993 Glucose dehydrogenase + Term 83569 - 83600 4.1 - Term 83557 - 83588 4.1 79 39 Tu 1 . - CDS 83609 - 85159 1585 ## COG2132 Putative multicopper oxidases - Prom 85198 - 85257 4.8 + Prom 85124 - 85183 2.1 80 40 Tu 1 . + CDS 85325 - 85672 358 ## ECSE_0122 hypothetical protein + Term 85698 - 85731 3.8 + Prom 85680 - 85739 5.6 81 41 Op 1 9/0.022 + CDS 85778 - 86644 869 ## COG0421 Spermidine synthase 82 41 Op 2 . + CDS 86660 - 87454 887 ## COG1586 S-adenosylmethionine decarboxylase + Term 87458 - 87501 2.1 - Term 87298 - 87336 2.2 83 42 Tu 1 . - CDS 87459 - 87854 486 ## COG3112 Uncharacterized protein conserved in bacteria - Prom 87944 - 88003 4.1 - Term 87956 - 87993 6.1 84 43 Tu 1 . - CDS 88029 - 90626 2844 ## COG1049 Aconitase B - Prom 90733 - 90792 8.6 + Prom 90708 - 90767 4.4 85 44 Tu 1 . + CDS 90981 - 92738 751 ## ECS88_0126 hypothetical protein + Term 92925 - 92959 3.5 - Term 92911 - 92947 6.4 86 45 Tu 1 30/0.000 - CDS 92980 - 94404 682 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 94576 - 94635 39.2 - Term 94574 - 94632 21.1 87 46 Op 1 13/0.000 - CDS 94639 - 96531 2308 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 88 46 Op 2 6/0.156 - CDS 96546 - 99209 3263 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component - Prom 99286 - 99345 1.7 - Term 99326 - 99365 2.8 89 47 Tu 1 . - CDS 99370 - 100134 700 ## COG2186 Transcriptional regulators - Prom 100255 - 100314 5.3 - Term 100525 - 100560 -1.0 90 48 Tu 1 . - CDS 100590 - 100880 319 ## ECS88_0120 colicin E7 immunity protein (ImmE7) (microcin E7 immunity protein) - Prom 100939 - 100998 7.5 - Term 101224 - 101260 4.2 91 49 Tu 1 . - CDS 101289 - 101579 342 ## ECS88_0118 colicin E7 immunity protein (ImmE7) (microcin E7 immunity protein) - Term 101922 - 101958 5.1 92 50 Op 1 . - CDS 101987 - 102271 248 ## EcSMS35_0117 putative colicin immunity protein 93 50 Op 2 . - CDS 102274 - 104055 946 ## COG3157 Hemolysin-coregulated protein (uncharacterized) + Prom 104325 - 104384 7.5 94 51 Tu 1 . + CDS 104583 - 105953 1576 ## COG1113 Gamma-aminobutyrate permease and related permeases 95 52 Op 1 6/0.156 - CDS 106011 - 106865 828 ## COG3725 Membrane protein required for beta-lactamase induction 96 52 Op 2 . - CDS 106862 - 107413 550 ## COG3023 Negative regulator of beta-lactamase expression - Prom 107443 - 107502 2.0 + Prom 107421 - 107480 2.0 97 53 Tu 1 . + CDS 107501 - 108394 459 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 + Prom 108462 - 108521 3.4 98 54 Op 1 8/0.067 + CDS 108598 - 109038 472 ## COG4969 Tfp pilus assembly protein, major pilin PilA 99 54 Op 2 24/0.000 + CDS 109048 - 110433 767 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 100 54 Op 3 . + CDS 110423 - 111625 976 ## COG1459 Type II secretory pathway, component PulF - Term 111614 - 111651 7.7 101 55 Tu 1 . - CDS 111660 - 112703 1033 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 112911 - 112970 3.0 + Prom 112767 - 112826 4.8 102 56 Op 1 7/0.089 + CDS 112928 - 113548 687 ## COG0237 Dephospho-CoA kinase 103 56 Op 2 7/0.089 + CDS 113548 - 114291 766 ## COG4582 Uncharacterized protein conserved in bacteria 104 56 Op 3 . + CDS 114301 - 114498 122 ## COG3024 Uncharacterized protein conserved in bacteria 105 57 Tu 1 8/0.067 - CDS 114586 - 114984 338 ## PROTEIN SUPPORTED gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 114992 - 115022 3.0 106 58 Op 1 . - CDS 115044 - 117749 3454 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Term 117752 - 117780 0.5 107 58 Op 2 . - CDS 117811 - 118398 361 ## G2583_0101 secretion monitor protein - Prom 118447 - 118506 4.9 - Term 118470 - 118527 2.1 108 59 Op 1 11/0.000 - CDS 118554 - 119471 817 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase - Prom 119502 - 119561 1.8 109 59 Op 2 35/0.000 - CDS 119572 - 120723 1370 ## COG0206 Cell division GTPase 110 59 Op 3 25/0.000 - CDS 120784 - 122046 1050 ## COG0849 Actin-like ATPase involved in cell division 111 59 Op 4 18/0.000 - CDS 122043 - 122873 697 ## COG1589 Cell division septal protein 112 59 Op 5 11/0.000 - CDS 122875 - 123795 1032 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 113 59 Op 6 26/0.000 - CDS 123788 - 125263 1501 ## COG0773 UDP-N-acetylmuramate-alanine ligase 114 59 Op 7 31/0.000 - CDS 125317 - 126360 999 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 115 59 Op 8 25/0.000 - CDS 126381 - 127625 1616 ## COG0772 Bacterial cell division membrane protein 116 59 Op 9 28/0.000 - CDS 127625 - 128941 1413 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 117 59 Op 10 28/0.000 - CDS 128944 - 130026 1326 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 118 59 Op 11 26/0.000 - CDS 130020 - 131378 1290 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 119 59 Op 12 26/0.000 - CDS 131375 - 132862 1552 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 120 59 Op 13 12/0.000 - CDS 132849 - 134615 1637 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 121 59 Op 14 12/0.000 - CDS 134631 - 134996 337 ## COG3116 Cell division protein 122 59 Op 15 29/0.000 - CDS 134993 - 135931 1112 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 123 59 Op 16 4/0.511 - CDS 135936 - 136394 358 ## COG2001 Uncharacterized protein conserved in bacteria - Prom 136439 - 136498 4.1 124 60 Tu 1 . - CDS 136996 - 138000 1042 ## COG1609 Transcriptional regulators - Prom 138029 - 138088 5.7 - Term 138122 - 138154 1.5 125 61 Op 1 32/0.000 - CDS 138180 - 138671 445 ## COG0440 Acetolactate synthase, small (regulatory) subunit 126 61 Op 2 2/0.733 - CDS 138674 - 140398 1370 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 140614 - 140673 9.5 - Term 140655 - 140713 16.1 127 62 Tu 1 . - CDS 140716 - 141678 810 ## COG0583 Transcriptional regulator - Prom 141740 - 141799 4.8 + Prom 142410 - 142469 14.7 128 63 Op 1 11/0.000 + CDS 142504 - 144075 1616 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 129 63 Op 2 10/0.000 + CDS 144075 - 145166 1222 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 130 63 Op 3 30/0.000 + CDS 145169 - 146569 1585 ## COG0065 3-isopropylmalate dehydratase large subunit 131 63 Op 4 . + CDS 146580 - 147185 801 ## COG0066 3-isopropylmalate dehydratase small subunit + Term 147416 - 147464 6.4 - Term 147214 - 147248 4.5 132 64 Tu 1 . - CDS 147293 - 147424 131 ## ECS88_0075 hypothetical protein - Prom 147446 - 147505 3.1 + Prom 147430 - 147489 4.4 133 65 Tu 1 . + CDS 147513 - 149168 1382 ## COG4533 ABC-type uncharacterized transport system, periplasmic component + Term 149274 - 149325 9.0 134 66 Op 1 14/0.000 + CDS 149332 - 150315 1073 ## COG4143 ABC-type thiamine transport system, periplasmic component 135 66 Op 2 11/0.000 + CDS 150291 - 151901 1789 ## COG1178 ABC-type Fe3+ transport system, permease component 136 66 Op 3 . + CDS 151885 - 152583 183 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 152609 - 152647 1.3 137 67 Tu 1 . - CDS 152697 - 153461 851 ## COG0586 Uncharacterized membrane-associated protein - Prom 153484 - 153543 3.5 138 68 Op 1 . - CDS 153616 - 154038 57 ## ECS88_0069 hypothetical protein 139 68 Op 2 . - CDS 154045 - 154893 -25 ## ECS88_0068 hypothetical protein - Prom 154919 - 154978 9.7 - Term 155364 - 155404 7.2 140 69 Tu 1 . - CDS 155408 - 156304 694 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 156426 - 156485 4.8 + Prom 156385 - 156444 4.2 141 70 Op 1 7/0.089 + CDS 156592 - 158292 1635 ## COG1069 Ribulose kinase 142 70 Op 2 5/0.289 + CDS 158303 - 159805 1445 ## COG2160 L-arabinose isomerase + Term 159806 - 159859 5.8 + Prom 159994 - 160053 2.3 143 71 Op 1 3/0.667 + CDS 160090 - 160785 702 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Term 160815 - 160855 5.8 144 71 Op 2 5/0.289 + CDS 160860 - 163211 1940 ## COG0417 DNA polymerase elongation subunit (family B) 145 72 Op 1 7/0.089 + CDS 163375 - 166281 3661 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 146 72 Op 2 . + CDS 166260 - 166952 218 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit + Term 167036 - 167068 -0.7 - Term 166923 - 166966 2.4 147 73 Tu 1 . - CDS 167102 - 168010 800 ## COG1076 DnaJ-domain-containing proteins 1 - Prom 168132 - 168191 3.3 + Prom 167968 - 168027 3.0 148 74 Op 1 16/0.000 + CDS 168172 - 170526 2246 ## COG1452 Organic solvent tolerance protein OstA 149 74 Op 2 13/0.000 + CDS 170579 - 171865 1404 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 150 74 Op 3 12/0.000 + CDS 171865 - 172854 464 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 151 74 Op 4 8/0.067 + CDS 172851 - 173672 787 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 152 74 Op 5 8/0.067 + CDS 173675 - 174052 315 ## COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport 153 74 Op 6 . + CDS 174059 - 174907 910 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases + Term 174948 - 174984 -1.0 - Term 175166 - 175195 1.1 154 75 Op 1 2/0.733 - CDS 175222 - 175455 230 ## COG5302 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid - Prom 175480 - 175539 3.9 155 75 Op 2 4/0.511 - CDS 175541 - 176020 675 ## COG0262 Dihydrofolate reductase - Prom 176044 - 176103 7.0 156 76 Op 1 7/0.089 - CDS 176212 - 178074 1031 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 157 76 Op 2 4/0.511 - CDS 178067 - 178540 467 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 178577 - 178636 4.1 158 77 Op 1 4/0.511 - CDS 178705 - 180036 1429 ## COG0477 Permeases of the major facilitator superfamily 159 77 Op 2 12/0.000 - CDS 180095 - 180382 343 ## COG2440 Ferredoxin-like protein 160 77 Op 3 9/0.022 - CDS 180379 - 181665 1357 ## COG0644 Dehydrogenases (flavoproteins) 161 77 Op 4 29/0.000 - CDS 181716 - 182657 908 ## COG2025 Electron transfer flavoprotein, alpha subunit 162 77 Op 5 . - CDS 182672 - 183478 801 ## COG2086 Electron transfer flavoprotein, beta subunit - Prom 183520 - 183579 3.9 + Prom 183832 - 183891 9.4 163 78 Op 1 4/0.511 + CDS 183915 - 185429 1725 ## COG1292 Choline-glycine betaine transporter 164 78 Op 2 8/0.067 + CDS 185460 - 186602 1414 ## COG1960 Acyl-CoA dehydrogenases 165 79 Op 1 4/0.511 + CDS 186730 - 187947 1368 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase 166 79 Op 2 5/0.289 + CDS 188020 - 189573 1030 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 167 79 Op 3 3/0.667 + CDS 189574 - 190467 984 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 168 79 Op 4 . + CDS 190473 - 191063 440 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily + Term 191300 - 191332 -1.0 - Term 191101 - 191156 0.3 169 80 Tu 1 . - CDS 191182 - 191577 329 ## APECO1_1947 DNA-binding transcriptional activator CaiF - Prom 191637 - 191696 3.5 - Term 191755 - 191785 5.0 170 81 Tu 1 . - CDS 191867 - 192112 184 ## COG1943 Transposase and inactivated derivatives 171 82 Op 1 3/0.667 - CDS 192840 - 194147 927 ## COG1538 Outer membrane protein 172 82 Op 2 13/0.000 - CDS 194214 - 195995 277 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 - Prom 196030 - 196089 1.7 173 82 Op 3 . - CDS 196182 - 197333 516 ## COG0845 Membrane-fusion protein - Prom 197425 - 197484 8.3 174 83 Op 1 . + CDS 199144 - 199329 76 ## EcSMS35_A0060 hypothetical protein 175 83 Op 2 . + CDS 199400 - 200761 1033 ## pECS88_0047 hypothetical protein 176 83 Op 3 . + CDS 200809 - 201372 321 ## pECS88_0048 putative adenine-specific DNA methylase + Term 201448 - 201483 4.1 177 84 Tu 1 . - CDS 201458 - 201979 -155 ## EcE24377A_E0029 hypothetical protein 178 85 Tu 1 . + CDS 202460 - 202747 331 ## pECS88_0060 hypothetical protein + Prom 202787 - 202846 6.2 179 86 Tu 1 . + CDS 202866 - 203687 483 ## pECS88_0061 hypothetical protein + Term 203693 - 203743 16.2 180 87 Tu 1 . - CDS 203983 - 204492 215 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 204691 - 204750 39.5 + Prom 204689 - 204748 39.5 181 88 Op 1 . + CDS 204957 - 205340 255 ## pECS88_0063 conjugal transfer protein TRAM + Term 205421 - 205455 -0.6 + Prom 205425 - 205484 30.3 182 88 Op 2 . + CDS 205536 - 206225 244 ## pECS88_0064 conjugal transfer transcriptional regulator TraJ + Prom 206227 - 206286 2.4 183 89 Op 1 . + CDS 206324 - 206719 155 ## ECO111_p3-60 conjugal transfer protein TraY 184 89 Op 2 . + CDS 206752 - 207117 364 ## pECS88_0066 conjugal transfer pilin subunit TraA 185 89 Op 3 . + CDS 207132 - 207443 380 ## EcSMS35_A0038 conjugal transfer pilus assembly protein TraL 186 89 Op 4 . + CDS 207465 - 208031 538 ## pECS88_0068 conjugal transfer pilus assembly protein TraE 187 89 Op 5 . + CDS 208018 - 208746 575 ## p1ECUMN_0108 conjugal transfer protein TraK 188 89 Op 6 . + CDS 208746 - 210173 1272 ## EcSMS35_A0035 conjugal transfer pilus assembly protein TraB 189 89 Op 7 . + CDS 210163 - 210753 136 ## pECS88_0071 conjugal transfer protein TraP 190 89 Op 8 . + CDS 210740 - 210937 133 ## E2348_P1_067 conjugal transfer protein TrbD 191 89 Op 9 . + CDS 210949 - 211200 196 ## pECS88_0073 conjugal transfer protein TrbG 192 89 Op 10 . + CDS 211197 - 211712 307 ## pECS88_0074 conjugal transfer protein TraV + Term 211735 - 211763 2.1 + Prom 211730 - 211789 3.1 193 90 Op 1 . + CDS 211847 - 212068 127 ## COG1734 DnaK suppressor protein 194 90 Op 2 . + CDS 212061 - 212165 65 ## 195 90 Op 3 . + CDS 212228 - 214855 2622 ## COG3451 Type IV secretory pathway, VirB4 components 196 90 Op 4 . + CDS 214852 - 215238 310 ## APECO1_O1CoBM40 conjugal transfer protein TrbI 197 90 Op 5 . + CDS 215235 - 215867 549 ## pECS88_0079 conjugal transfer pilus assembly protein TraW 198 90 Op 6 . + CDS 215864 - 216856 776 ## APECO1_O1CoBM42 conjugal transfer pilus assembly protein TraU 199 90 Op 7 . + CDS 216865 - 217503 416 ## pECS88_0081 conjugal transfer pilus assembly protein TrbC 200 90 Op 8 . + CDS 217500 - 219308 1151 ## E2348_P1_058 conjugal transfer mating pair stabilization protein TraN 201 90 Op 9 . + CDS 219335 - 219592 91 ## pECS88_0083 conjugal transfer protein TrbE 202 90 Op 10 . + CDS 219585 - 220328 670 ## pECS88_0084 conjugal pilus assembly protein TraF 203 90 Op 11 . + CDS 220344 - 220691 63 ## EcSMS35_A0019 conjugal transfer protein TrbA + Prom 220696 - 220755 4.5 204 91 Op 1 . + CDS 220810 - 221094 327 ## EcSMS35_A0018 conjugal transfer pilin chaperone TraQ 205 91 Op 2 . + CDS 221081 - 221626 510 ## p1ECUMN_0087 conjugal transfer protein TrbB 206 91 Op 3 . + CDS 221616 - 221918 122 ## EcSMS35_A0016 conjugal transfer protein TrbJ 207 91 Op 4 . + CDS 221915 - 223291 1291 ## EcSMS35_A0015 conjugal transfer pilus assembly protein TraH 208 91 Op 5 . + CDS 223288 - 225861 1583 ## APECO1_O1CoBM53 hypothetical protein 209 91 Op 6 . + CDS 225879 - 226112 90 ## EcSMS35_A0014 conjugal transfer mating pair stabilization protein TraG 210 91 Op 7 . + CDS 226133 - 226630 220 ## pECS88_0091 surface exclusion inner membrane protein TraS 211 91 Op 8 . + CDS 226662 - 227393 704 ## pECS88_0092 conjugal transfer surface exclusion protein TraT + Term 227562 - 227588 0.1 + Prom 227423 - 227482 5.9 212 92 Op 1 . + CDS 227645 - 229807 2117 ## COG3505 Type IV secretory pathway, VirD4 components 213 92 Op 2 . + CDS 229807 - 230169 303 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 214 92 Op 3 . + CDS 230209 - 235104 3316 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 215 92 Op 4 . + CDS 235124 - 235870 600 ## pECS88_0095 conjugal transfer pilus acetylation protein TraX 216 92 Op 5 . + CDS 235925 - 236485 486 ## EcSMS35_A0008 conjugal transfer fertility inhibition protein FinO + Prom 236521 - 236580 2.5 217 93 Tu 1 . + CDS 236623 - 236835 73 ## pECS88_0097 hypothetical protein + Term 236906 - 236942 2.3 + Prom 236927 - 236986 5.6 218 94 Tu 1 . + CDS 237078 - 237479 203 ## COG1525 Micrococcal nuclease (thermonuclease) homologs 219 95 Tu 1 . + CDS 237593 - 237784 167 ## EcSMS35_A0003 replication protein + Prom 237954 - 238013 1.8 220 96 Tu 1 . + CDS 238128 - 238934 698 ## EcSMS35_A0002 replication protein - Term 239305 - 239338 -0.3 221 97 Op 1 . - CDS 239415 - 239693 204 ## pECS88_0111 conserved hypothetical protein, predicted dehydrogenase 222 97 Op 2 . - CDS 239690 - 239959 155 ## EAMY_0624 hypothetical protein 223 97 Op 3 . - CDS 239961 - 240365 89 ## APECO1_O1CoBM84 hypothetical protein 224 97 Op 4 . - CDS 240337 - 240744 111 ## COG0673 Predicted dehydrogenases and related proteins + Prom 240893 - 240952 6.2 225 98 Tu 1 . + CDS 241113 - 241424 177 ## pECS88_0115 colicin V precursor (microcin V bacteriocin) + Term 241458 - 241514 5.3 - Term 241322 - 241354 1.1 226 99 Op 1 13/0.000 - CDS 241594 - 243690 176 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 227 99 Op 2 1/0.889 - CDS 243683 - 244957 682 ## COG0845 Membrane-fusion protein - Prom 245131 - 245190 12.0 - Term 245556 - 245590 1.2 228 100 Op 1 24/0.000 - CDS 245601 - 248822 4247 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 229 100 Op 2 8/0.067 - CDS 248840 - 249883 1035 ## COG0505 Carbamoylphosphate synthase small subunit - Prom 249973 - 250032 2.1 - Term 250350 - 250397 3.6 230 101 Tu 1 . - CDS 250444 - 251265 911 ## COG0289 Dihydrodipicolinate reductase - Prom 251352 - 251411 3.6 - Term 251376 - 251417 6.3 231 102 Op 1 . - CDS 251426 - 251791 186 ## ECS88_0030 hypothetical protein 232 102 Op 2 3/0.667 - CDS 251814 - 252728 834 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Term 252732 - 252765 2.1 233 103 Op 1 7/0.089 - CDS 252794 - 253744 441 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 234 103 Op 2 7/0.089 - CDS 253746 - 254195 257 ## PROTEIN SUPPORTED gi|225086978|ref|YP_002658248.1| ribosomal protein S2 - Prom 254215 - 254274 3.6 235 104 Op 1 16/0.000 - CDS 254303 - 254797 591 ## COG0597 Lipoprotein signal peptidase 236 104 Op 2 16/0.000 - CDS 254797 - 257613 3127 ## COG0060 Isoleucyl-tRNA synthetase 237 104 Op 3 . - CDS 257656 - 258597 391 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 - Prom 258620 - 258679 5.2 + Prom 258826 - 258885 3.6 238 105 Tu 1 . + CDS 258926 - 259189 422 ## PROTEIN SUPPORTED gi|15799705|ref|NP_285717.1| 30S ribosomal protein S20 + Term 259220 - 259245 -0.5 - Term 259208 - 259233 -0.5 239 106 Op 1 5/0.289 - CDS 259285 - 260184 902 ## COG0583 Transcriptional regulator - Term 260201 - 260236 3.2 240 106 Op 2 . - CDS 260250 - 261416 1142 ## COG3004 Na+/H+ antiporter - Prom 261447 - 261506 4.2 241 107 Tu 1 . - CDS 261651 - 262646 411 ## ECS88_0019 hypothetical protein - Prom 262749 - 262808 3.4 - Term 262949 - 262990 10.1 242 108 Op 1 . - CDS 263039 - 264532 1204 ## COG3119 Arylsulfatase A and related enzymes 243 108 Op 2 . - CDS 264552 - 265313 550 ## ECS88_0017 hypothetical protein - Prom 265485 - 265544 8.8 + Prom 265627 - 265686 4.6 244 109 Tu 1 . + CDS 265925 - 266077 150 ## ECO103_0016 regulatory protein MokC for HokC + Term 266233 - 266273 -0.2 - Term 266072 - 266122 13.7 245 110 Op 1 31/0.000 - CDS 266201 - 267331 1230 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain - Term 267345 - 267391 11.0 246 110 Op 2 . - CDS 267420 - 269336 2345 ## COG0443 Molecular chaperone + Prom 269616 - 269675 6.8 247 111 Op 1 . + CDS 269708 - 270112 325 ## ECS88_0013 hypothetical protein 248 111 Op 2 4/0.511 + CDS 270138 - 270851 537 ## COG4735 Uncharacterized protein conserved in bacteria + Term 270931 - 270971 3.2 + Prom 270872 - 270931 4.5 249 112 Tu 1 . + CDS 271000 - 271566 772 ## COG1584 Predicted membrane protein + Term 271698 - 271734 2.4 250 113 Tu 1 . - CDS 271771 - 272358 692 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 - Prom 272388 - 272447 2.6 - Term 272425 - 272465 9.3 251 114 Tu 1 . - CDS 272473 - 273426 1249 ## COG0176 Transaldolase - Prom 273473 - 273532 1.9 + Prom 273589 - 273648 4.3 252 115 Op 1 5/0.289 + CDS 273705 - 275135 807 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 253 115 Op 2 . + CDS 275205 - 275981 757 ## COG3022 Uncharacterized protein conserved in bacteria + Term 275990 - 276029 9.3 254 116 Tu 1 . - CDS 276021 - 276317 208 ## ECS88_0005 hypothetical protein - Prom 276463 - 276522 2.8 - Term 276468 - 276507 4.2 255 117 Op 1 19/0.000 - CDS 276531 - 277817 1535 ## COG0498 Threonine synthase 256 117 Op 2 11/0.000 - CDS 277818 - 278750 734 ## COG0083 Homoserine kinase 257 117 Op 3 . - CDS 278752 - 281214 2183 ## COG0527 Aspartokinases - Prom 281236 - 281295 24.2 258 118 Tu 1 . - CDS 281589 - 282275 450 ## COG0565 rRNA methylase - Prom 282436 - 282495 8.3 259 119 Tu 1 . + CDS 282911 - 283627 842 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Term 283466 - 283506 5.1 260 120 Op 1 6/0.156 - CDS 283682 - 285034 1171 ## COG4452 Inner membrane protein involved in colicin E2 resistance 261 120 Op 2 40/0.000 - CDS 285092 - 286516 1250 ## COG0642 Signal transduction histidine kinase 262 120 Op 3 4/0.511 - CDS 286516 - 287205 569 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 263 120 Op 4 . - CDS 287218 - 287691 508 ## COG3045 Uncharacterized protein conserved in bacteria - Prom 287736 - 287795 4.3 + Prom 287650 - 287709 4.5 264 121 Tu 1 . + CDS 287902 - 288771 930 ## COG2207 AraC-type DNA-binding domain-containing proteins 265 122 Tu 1 . - CDS 288768 - 289415 620 ## COG0406 Fructose-2,6-bisphosphatase - Prom 289457 - 289516 2.7 + Prom 289379 - 289438 2.8 266 123 Tu 1 . + CDS 289458 - 289988 401 ## COG1986 Uncharacterized conserved protein - Term 289986 - 290051 3.1 267 124 Op 1 4/0.511 - CDS 290073 - 290399 371 ## COG2973 Trp operon repressor 268 124 Op 2 . - CDS 290489 - 292426 1618 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Prom 292481 - 292540 3.2 269 125 Tu 1 . + CDS 292637 - 294304 2274 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 294399 - 294462 2.1 270 126 Op 1 1/0.889 - CDS 294611 - 295843 1358 ## COG3172 Predicted ATPase/kinase involved in NAD metabolism 271 126 Op 2 5/0.289 - CDS 295864 - 297246 1410 ## COG1066 Predicted ATP-dependent serine protease 272 126 Op 3 . - CDS 297295 - 297429 81 ## COG0560 Phosphoserine phosphatase 273 126 Op 4 . - CDS 297426 - 298301 887 ## COG0560 Phosphoserine phosphatase - Prom 298339 - 298398 3.1 + Prom 298266 - 298325 4.6 274 127 Op 1 2/0.733 + CDS 298407 - 299051 726 ## COG3726 Uncharacterized membrane protein affecting hemolysin expression 275 127 Op 2 2/0.733 + CDS 299079 - 300095 1097 ## COG0095 Lipoate-protein ligase A 276 127 Op 3 . + CDS 300127 - 300390 211 ## COG1396 Predicted transcriptional regulators - Term 300479 - 300516 6.0 277 128 Tu 1 . - CDS 300550 - 301269 926 ## COG0813 Purine-nucleoside phosphorylase - Prom 301302 - 301361 7.2 - Term 301278 - 301328 12.5 278 129 Op 1 4/0.511 - CDS 301370 - 302593 1545 ## COG1015 Phosphopentomutase 279 129 Op 2 7/0.089 - CDS 302645 - 303967 1741 ## COG0213 Thymidine phosphorylase - Prom 304040 - 304099 7.4 - Term 304043 - 304083 4.1 280 130 Tu 1 . - CDS 304134 - 304913 969 ## COG0274 Deoxyribose-phosphate aldolase - Prom 305008 - 305067 4.5 + Prom 305008 - 305067 4.7 281 131 Tu 1 . + CDS 305172 - 306722 1473 ## JW4343 conserved hypothetical protein + Term 306748 - 306783 4.0 282 132 Tu 1 . + CDS 306823 - 307557 626 ## COG1180 Pyruvate-formate lyase-activating enzyme - Term 307696 - 307747 3.0 283 133 Op 1 4/0.511 - CDS 307770 - 308552 755 ## COG0084 Mg-dependent DNase 284 133 Op 2 . - CDS 308549 - 309622 798 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 309650 - 309709 2.3 - Term 309675 - 309717 7.2 285 134 Tu 1 . - CDS 309744 - 309905 193 ## gi|157147615|ref|YP_001454934.1| hypothetical protein CKO_03415 286 135 Tu 1 . - CDS 310032 - 310637 670 ## COG2823 Predicted periplasmic or secreted lipoprotein - Term 310980 - 311019 8.0 287 136 Op 1 3/0.667 - CDS 311030 - 312619 1980 ## COG4108 Peptide chain release factor RF-3 288 136 Op 2 4/0.511 - CDS 312710 - 313387 718 ## COG1011 Predicted hydrolase (HAD superfamily) 289 136 Op 3 8/0.067 - CDS 313402 - 313848 749 ## PROTEIN SUPPORTED gi|15804944|ref|NP_290986.1| ribosomal-protein-alanine N-acetyltransferase 290 136 Op 4 . - CDS 313817 - 314230 389 ## COG3050 DNA polymerase III, psi subunit - Prom 314253 - 314312 3.0 + Prom 314251 - 314310 6.0 291 137 Tu 1 . + CDS 314333 - 315364 264 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative + TRNA 315673 - 315759 69.1 # Leu CAG 0 0 Predicted protein(s) >gi|296918658|gb|GG773042.1| GENE 1 94 - 666 619 190 aa, chain - ## HITS:1 COG:ECs0202 KEGG:ns NR:ns ## COG: ECs0202 COG0241 # Protein_GI_number: 15829456 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Escherichia coli O157:H7 # 1 190 1 190 191 388 98.0 1e-108 MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIAR GKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMFLSA RDYLHIDMAASYMVGDKLEDMQAAAAASVGTKVLVRTGKPITPEAENAADWVLNSLADLP QAIKKQQKPA >gi|296918658|gb|GG773042.1| GENE 2 854 - 1885 1122 343 aa, chain + ## HITS:1 COG:ECs0201 KEGG:ns NR:ns ## COG: ECs0201 COG1135 # Protein_GI_number: 15829455 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 343 1 343 343 677 100.0 0 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEG SVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRR VTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSIL ELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKF IQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQ MDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEVLGYV >gi|296918658|gb|GG773042.1| GENE 3 1878 - 2531 870 217 aa, chain + ## HITS:1 COG:yaeE KEGG:ns NR:ns ## COG: yaeE COG2011 # Protein_GI_number: 16128191 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Escherichia coli K12 # 1 217 1 217 217 308 99.0 4e-84 MSEPMIWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTISAIV NIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLI EASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG YIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK >gi|296918658|gb|GG773042.1| GENE 4 2571 - 3386 1178 271 aa, chain + ## HITS:1 COG:yaeC KEGG:ns NR:ns ## COG: yaeC COG1464 # Protein_GI_number: 16128190 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 1 271 1 271 271 507 100.0 1e-144 MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLD VELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSKK IKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIV ELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVEDKESPYVNLIVTREDNKDA ENVKKFVQAYQSDEVYEAANKVFNGGAVKGW >gi|296918658|gb|GG773042.1| GENE 5 3504 - 3908 320 134 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0196 NR:ns ## KEGG: ECO103_0196 # Name: rcsF # Def: outer membrane lipoprotein # Organism: E.coli_O103_H2 # Pathway: Two-component system [PATH:eoh02020] # 1 134 1 134 134 220 100.0 1e-56 MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVG KPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYR QAVCIGSALNITAK >gi|296918658|gb|GG773042.1| GENE 6 3905 - 4612 634 235 aa, chain + ## HITS:1 COG:yaeB KEGG:ns NR:ns ## COG: yaeB COG1720 # Protein_GI_number: 16128188 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 235 1 235 235 469 99.0 1e-132 MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWIL FVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILK LGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVCFTAEVEKQLLTLEKRY PQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR >gi|296918658|gb|GG773042.1| GENE 7 4723 - 6441 2137 572 aa, chain + ## HITS:1 COG:ECs0196 KEGG:ns NR:ns ## COG: ECs0196 COG0442 # Protein_GI_number: 15829450 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 572 1 572 572 1123 98.0 0 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIA PKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPLVALLVRG DHELNEVKAEKLPQVASPLTFATEEEIRAVVKAGPGSLGPVNMPIPVVIDRTVAAMSDFA AGANIDGKHYFGINWDRDVATPEIADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTK YSEALKASVQGEDGRNQILTMGCYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILP MNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLD NDDIEYKYRRNGEKQLIKTGDIVDYLVKQIKG >gi|296918658|gb|GG773042.1| GENE 8 6494 - 7318 383 274 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1794 NR:ns ## KEGG: APECO1_1794 # Name: yaeF # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 274 1 274 274 526 100.0 1e-148 MDKPKAYCRLLLPCFLLLSACTVDISQPDSSATVVNAEAKTWAVKFQHQSSFTEQSIKEI TEPDLKPGDLLFSSSLGVTSFGIRVFSTSSVSHVAIYLGDNNVAEATGAGVQIVSLKKAI KHSDKLFVLRVPDLTPQQATEITAFANKIKDSGYNYRGIVEFIPFMVTRQMCSLNPFSED FRQQCVSGLAKAQLSSVGEGDKKSWFCSEFVTDAFAKAGHPLTLAQSGWISPADLMHMRS GDVSAFKPETQLQYIGHLKPGIYIKASRFVGLTQ >gi|296918658|gb|GG773042.1| GENE 9 7474 - 8184 638 236 aa, chain - ## HITS:1 COG:ECs0194 KEGG:ns NR:ns ## COG: ECs0194 COG3015 # Protein_GI_number: 15829448 # Func_class: M Cell wall/membrane/envelope biogenesis; P Inorganic ion transport and metabolism # Function: Uncharacterized lipoprotein NlpE involved in copper resistance # Organism: Escherichia coli O157:H7 # 1 235 1 235 236 465 99.0 1e-131 MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQSWRGVLPCADCEGIETS LFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEML DREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELE RGYLAARGNSEKPVLLSVEGHFTLEANPDTGAPTKVLAPDTAGKFYPNQDCSSLGL >gi|296918658|gb|GG773042.1| GENE 10 8198 - 8620 254 140 aa, chain - ## HITS:1 COG:yaeJ KEGG:ns NR:ns ## COG: yaeJ COG1186 # Protein_GI_number: 16128184 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Escherichia coli K12 # 1 140 1 140 140 209 96.0 9e-55 MIVISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAAS HHLISSDGVIVIKAQEYRNQELNREAALARLVAVIKDLTTEQKARRPTRPTRASKERRLA SKAQKSSVKAMRGKVRSGRE >gi|296918658|gb|GG773042.1| GENE 11 8617 - 9162 757 181 aa, chain - ## HITS:1 COG:yaeQ KEGG:ns NR:ns ## COG: yaeQ COG4681 # Protein_GI_number: 16128183 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 181 1 181 181 326 98.0 1e-89 MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRG LCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFAYNSRAAQIWWQQNQ SKCAQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTVWQQP S >gi|296918658|gb|GG773042.1| GENE 12 9517 - 9777 274 86 aa, chain + ## HITS:1 COG:ECs0191 KEGG:ns NR:ns ## COG: ECs0191 COG4568 # Protein_GI_number: 15829445 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli O157:H7 # 1 86 1 86 86 157 97.0 5e-39 MSINDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDLVSRKNVEYLVVEAAG ATRELRLDKITSFSHPEIGTVVVSES >gi|296918658|gb|GG773042.1| GENE 13 9825 - 11123 1148 432 aa, chain - ## HITS:1 COG:mesJ KEGG:ns NR:ns ## COG: mesJ COG0037 # Protein_GI_number: 16128181 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Escherichia coli K12 # 1 432 1 432 432 776 96.0 0 MTLTLNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAW VKHCENICQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQ CETFLLALKRGSGPAGLSAMAEVSEFAGTQLIRPLLARTRGELVQWALAHGLRWIEDESN QDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAEQESLLDELLADDLAHCQTPQGT LQIAPMLAMSDARRAAIIRRWLAGQNAPMPSRDALVRIWQEVALAREDASPCLRLGAFEI RRYQSQLWWIKFVTGQSETIVPWQTWLQPLELPAGLGSVQLTAGGDIRPPRADEAVSVRF KAPGLLHIVGRNGGRKLKKIWQELGVPPWLRDTTPLLFYGETLIAAAGVFVTQEGVAVGE NGVSFVWKKTLS >gi|296918658|gb|GG773042.1| GENE 14 11188 - 11577 441 129 aa, chain - ## HITS:1 COG:ECs0189 KEGG:ns NR:ns ## COG: ECs0189 COG0346 # Protein_GI_number: 15829443 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Escherichia coli O157:H7 # 1 129 10 138 138 270 99.0 6e-73 MLGLKQVHHIAIIATDYAMSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFS FPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPD GLPLELYEQ >gi|296918658|gb|GG773042.1| GENE 15 11634 - 13775 1972 713 aa, chain - ## HITS:1 COG:ldcC KEGG:ns NR:ns ## COG: ldcC COG1982 # Protein_GI_number: 16128179 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli K12 # 1 713 1 713 713 1499 99.0 0 MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQY TNEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLI DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRGEFTRDSIEEKVAATTQAQWPVH AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIF ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNP GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFSDAD ANHMFLDPVKVTILTPGMDEHGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH DLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM PGEMLTEESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG >gi|296918658|gb|GG773042.1| GENE 16 13873 - 14832 1351 319 aa, chain - ## HITS:1 COG:ECs0187 KEGG:ns NR:ns ## COG: ECs0187 COG0825 # Protein_GI_number: 15829441 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Escherichia coli O157:H7 # 1 319 1 319 319 617 99.0 1e-177 MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGA WQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQK GRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEA IARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKS ADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLTDLADLDVL STEDLKNRRYQRLMSYGYA >gi|296918658|gb|GG773042.1| GENE 17 14845 - 15957 952 370 aa, chain - ## HITS:1 COG:dnaE KEGG:ns NR:ns ## COG: dnaE COG0587 # Protein_GI_number: 16128177 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Escherichia coli K12 # 1 370 791 1160 1160 754 100.0 0 MDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAII EARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAAD QHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYL KEIERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTD RQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLI GSEQVELEFD >gi|296918658|gb|GG773042.1| GENE 18 15978 - 18350 2480 790 aa, chain - ## HITS:1 COG:dnaE KEGG:ns NR:ns ## COG: dnaE COG0587 # Protein_GI_number: 16128177 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Escherichia coli K12 # 1 785 1 785 1160 1610 99.0 0 MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA GIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGTAGPIIDRDW LIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEES YLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM RSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGL EERLAFLFPDEEERLKRRPEYDERLDTELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKKGEPPLDIAAIPLDDKKSFDML QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM AKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA EFMAAGKNAS >gi|296918658|gb|GG773042.1| GENE 19 18387 - 18983 685 198 aa, chain - ## HITS:1 COG:ECs0185 KEGG:ns NR:ns ## COG: ECs0185 COG0164 # Protein_GI_number: 15829439 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Escherichia coli O157:H7 # 1 198 1 198 198 374 98.0 1e-104 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLVLCEE IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPSM AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT EHHRRSFGPVKRALGLAS >gi|296918658|gb|GG773042.1| GENE 20 18980 - 20128 1095 382 aa, chain - ## HITS:1 COG:ECs0184 KEGG:ns NR:ns ## COG: ECs0184 COG0763 # Protein_GI_number: 15829438 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 743 99.0 0 MTEQRPLTIALVAGETSGDILGAGLIRALKERVPNARFVGVAGPRMQAEGCEAWYEMEEL AVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDFNITLEGNLKKQGIKTIHY VSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVPCRFIGHTMADAMPLDPDKNG ARDVLGIPYDAHCLALLPGSRGAEVEMLSADFLKTAQLLRQTYPDLEIVVPLVNAKRREQ FERIKAAVAPDLSVHLLDGMGREAMVASDAALLASGTAALECMLAKCPMVVGYRMKPFTF WLAKRLVKTDYVSLPNLLAGRELVKELLQEECEPQKLAAALLPLLANGKTSHAMHDTFRE LHQQIRCNADEQAAQAVLELAQ >gi|296918658|gb|GG773042.1| GENE 21 20128 - 20916 753 262 aa, chain - ## HITS:1 COG:lpxA KEGG:ns NR:ns ## COG: lpxA COG1043 # Protein_GI_number: 16128174 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Escherichia coli K12 # 1 262 1 262 262 511 100.0 1e-145 MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDN EIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMIN AHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQD VPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLIYRSGKTLDEVKPEIAELA ETYPEVKAFTDFFARSTRGLIR >gi|296918658|gb|GG773042.1| GENE 22 20920 - 21375 485 151 aa, chain - ## HITS:1 COG:ZfabZ KEGG:ns NR:ns ## COG: ZfabZ COG0764 # Protein_GI_number: 15799862 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 EDL933 # 1 151 1 151 151 295 100.0 2e-80 MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPI FPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKT RRGLTRFKGVALVDGKVVCEATMMCARSREA >gi|296918658|gb|GG773042.1| GENE 23 21480 - 22505 865 341 aa, chain - ## HITS:1 COG:ECs0181 KEGG:ns NR:ns ## COG: ECs0181 COG1044 # Protein_GI_number: 15829435 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 648 99.0 0 MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVNPKYREHLGLCQASAVV MTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPKPAQNIAPSAVIDETAKLGNNVSIGA NAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGA DGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDDTVIGNGVIIDNQCQIAHN VVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGMVMRPITEPGV YSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLERKVNQQD >gi|296918658|gb|GG773042.1| GENE 24 22509 - 22994 616 161 aa, chain - ## HITS:1 COG:STM0225 KEGG:ns NR:ns ## COG: STM0225 COG2825 # Protein_GI_number: 16763615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 209 90.0 2e-54 MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSNTLENEFKGRASELQRM ETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFEQDRARRSNEERGKLVTRI QTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQVK >gi|296918658|gb|GG773042.1| GENE 25 23116 - 25548 2674 810 aa, chain - ## HITS:1 COG:ECs0179 KEGG:ns NR:ns ## COG: ECs0179 COG4775 # Protein_GI_number: 15829433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Escherichia coli O157:H7 # 1 810 1 810 810 1609 100.0 0 MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDIS NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQI NIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTK VTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTS KDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKE RNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQ PQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVT IPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTV RGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPL GPLVFSYAQPFKKYDGDKAEQFQFNIGKTW >gi|296918658|gb|GG773042.1| GENE 26 25578 - 26930 986 450 aa, chain - ## HITS:1 COG:ECs0178 KEGG:ns NR:ns ## COG: ECs0178 COG0750 # Protein_GI_number: 15829432 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 870 99.0 0 MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYV IALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAIFAYWLVF IIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTI TVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAASKAGL QAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGKGKAIG FVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKTWQLMKLTVSMLGKLITGDVKLNNLSG PISIAKGAGMTAELGVVYYLPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKIKGGPVS ERVQDFCYRIGSILLVLLMGLALFNDFSRL >gi|296918658|gb|GG773042.1| GENE 27 26942 - 27691 670 249 aa, chain - ## HITS:1 COG:ECs0177 KEGG:ns NR:ns ## COG: ECs0177 COG0575 # Protein_GI_number: 15829431 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Escherichia coli O157:H7 # 1 249 1 249 249 415 98.0 1e-116 MLAAWEWGQLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWW IVALLLVLFYPGSAAIWRNSKTLRIIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLY VMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLVTAAVISWGYGMWVNLDVA PVTLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC LLLLVFRTL >gi|296918658|gb|GG773042.1| GENE 28 27812 - 28570 507 252 aa, chain - ## HITS:1 COG:ECs0176 KEGG:ns NR:ns ## COG: ECs0176 COG0020 # Protein_GI_number: 15829430 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Escherichia coli O157:H7 # 1 252 2 253 253 509 100.0 1e-144 MLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNG IEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQ ERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHV CMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRER RFGGTEPGDETA >gi|296918658|gb|GG773042.1| GENE 29 28759 - 29955 866 398 aa, chain - ## HITS:1 COG:dxr KEGG:ns NR:ns ## COG: dxr COG0743 # Protein_GI_number: 16128166 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Escherichia coli K12 # 1 398 1 398 398 757 99.0 0 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVARMVEQCLEFSPRYAVMDDEA SAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTI LLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVS ILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN ASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFC KLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALN LSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS >gi|296918658|gb|GG773042.1| GENE 30 30047 - 30604 787 185 aa, chain - ## HITS:1 COG:ECs0174 KEGG:ns NR:ns ## COG: ECs0174 COG0233 # Protein_GI_number: 15829428 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 296 100.0 1e-80 MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVE DSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGE AEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEA ELMQF >gi|296918658|gb|GG773042.1| GENE 31 30567 - 30764 90 65 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_0174 NR:ns ## KEGG: ECIAI39_0174 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 65 28 92 92 105 100.0 8e-22 MRTSASFLISLITLRILENLSQSDQTVTHSGSVLSIALIKHITGKIPRDTYAESYPYLSI TGIIP >gi|296918658|gb|GG773042.1| GENE 32 30754 - 31479 1072 241 aa, chain - ## HITS:1 COG:ECs0173 KEGG:ns NR:ns ## COG: ECs0173 COG0528 # Protein_GI_number: 15829427 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Escherichia coli O157:H7 # 1 241 1 241 241 460 100.0 1e-130 MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNL FRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDSYSWA EAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPT ATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLIT E >gi|296918658|gb|GG773042.1| GENE 33 31626 - 32477 1001 283 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 280 1 279 283 390 71 1e-107 MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADG VIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKAQFEEERV ALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKGADEELVKHIAMHVAASKPEF IKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMEPSK TVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEVAAMSKQS >gi|296918658|gb|GG773042.1| GENE 34 32612 - 33535 1604 307 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 [Escherichia coli CFT073] # 1 307 1 307 307 622 99 1e-177 MVSTTYLWYKARRTSDPFRIHRLDGSDNLTLCNNTHVSAHIPGCPLGSVIWDTWRHNPNF YIEVLIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEAL AELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRL KDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIK EANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAE ESFVEAE >gi|296918658|gb|GG773042.1| GENE 35 33705 - 34499 847 264 aa, chain + ## HITS:1 COG:ECs0170 KEGG:ns NR:ns ## COG: ECs0170 COG0024 # Protein_GI_number: 15829424 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 537 100.0 1e-153 MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACL GYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTI MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEE PQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVV TDNGCEILTLRKDDTIPAIISHDE >gi|296918658|gb|GG773042.1| GENE 36 34636 - 37308 2025 890 aa, chain + ## HITS:1 COG:glnD KEGG:ns NR:ns ## COG: glnD COG2844 # Protein_GI_number: 16128160 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Escherichia coli K12 # 1 890 1 890 890 1780 99.0 0 MNTLPEQYANTALPTLSGQPQNPCAWPRDELTVGGIKAHIDTFQRWLGDAFDNGISAEQL IEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHPLSDIDLLILSRKKLPDDQ AQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVATNLIESRLLIGDVALFLELQK HIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPDIKSSPGGLRDIHTLQWVARRHF GATSLDEMVGFGFLTSAERAELNECLHILWRIRFALHLVVSRYDNRLLFDRQLSVAQRLN YSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLFDEAILALPADEKPRPIDDEFQLRGTL IDLRDETLFMRQPEAILRMFYTMVRNSAITGIYSTTLRQLRHARRHLQQPLCNIPEARKL FLSILRHPGAVRRGLLPMHRHSVLGAYMPQWSHIVGQMQFDLFHAYTVDEHTIRVMLKLE SFASEETRQRHPLCVDVWPRLPSTELIFIAALFHDIAKGRGGDHSILGAQDVVHFAELHG LNSRETQLVAWLVRQHLLMSVTAQRRDIQDPEVIKQFAEEVQTENRLRYLVCLTVADICA TNETLWNSWKQSLLRELYFATEKQLRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEAL HQIWSRCRANYFVRHSPNQLAWHARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYL FAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQ SSWQPPQPRRQPAKLRHFTVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGI SLHGARITTIGERVEDLFIIATADRRALNNELQQEVHQRLTEALNPNDKG >gi|296918658|gb|GG773042.1| GENE 37 37339 - 38163 1027 274 aa, chain + ## HITS:1 COG:dapD KEGG:ns NR:ns ## COG: dapD COG2171 # Protein_GI_number: 16128159 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Escherichia coli K12 # 1 274 1 274 274 519 99.0 1e-147 MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALRVAEKIDGQWVTHQWLK KAVLLSFRINDNQVIEGAESRYFDKVPMKFANYDEARFQKEGFRVVPPAAVRQGAFIARN TVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIED NCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSVVVSGNLPS KDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID >gi|296918658|gb|GG773042.1| GENE 38 38475 - 38861 484 128 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_0162 NR:ns ## KEGG: ECIAI1_0162 # Name: yaeH # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 128 1 128 128 218 100.0 7e-56 MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVAD GVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEA DLEKLTRK >gi|296918658|gb|GG773042.1| GENE 39 38915 - 40018 988 367 aa, chain - ## HITS:1 COG:yaeG KEGG:ns NR:ns ## COG: yaeG COG3835 # Protein_GI_number: 16128155 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sugar diacid utilization regulator # Organism: Escherichia coli K12 # 1 367 25 391 391 697 99.0 0 MRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGI NLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMN LIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERN NLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPG SIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKAMD NNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVA LQLDEER >gi|296918658|gb|GG773042.1| GENE 40 40223 - 41647 1424 474 aa, chain - ## HITS:1 COG:ECs0165 KEGG:ns NR:ns ## COG: ECs0165 COG0265 # Protein_GI_number: 15829419 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli O157:H7 # 1 474 1 474 474 779 99.0 0 MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPMLEKVMPSVVSINVEGS TTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGLGGNGGGQQQKFMALGSGVIID ADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMAD SDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGAL VNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNS DLAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVG SKLTLGLLRDGKQVNVNLELQQSSQNQVDSSTIFNGIEGAEMSNKGKDQGVVVNNVKTGT PAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ >gi|296918658|gb|GG773042.1| GENE 41 41777 - 43294 925 505 aa, chain - ## HITS:1 COG:dgt KEGG:ns NR:ns ## COG: dgt COG0232 # Protein_GI_number: 16128153 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Escherichia coli K12 # 1 505 1 505 505 1005 98.0 0 MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERN AAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDELTGPFESIVEMSCLMHDIG NPPFGHFGEAAINDWFRQRLYPEDAESQPLTDDRCSVAALRLRDGEEPLNALRRKIRQDL CHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWWRGETPETHHYLMKKPGYYLSEE AYIARLRKELNLALYSRFPLTWIMEAADDISYCVADLEDAVEKRIFTVEQLYHHLHEAWG QHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFMYLRVNTLNKLVPYAAQRFIDNLPAIF AGTFNHALLEDASECSDLLKLYKNVAVKHVFSHPDVEQLELQGYRVISGLLEIYRPLLNL PLSDFTELVEKERVKRFPIETRLFHKLSTRHRLAYVEAVSKLPSDSPEFPLWEYYYRCRL LQDYISGMTDLYAWDEYRRLMAVEQ >gi|296918658|gb|GG773042.1| GENE 42 43378 - 44076 709 232 aa, chain + ## HITS:1 COG:STM0207 KEGG:ns NR:ns ## COG: STM0207 COG0775 # Protein_GI_number: 16763597 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Salmonella typhimurium LT2 # 1 232 1 232 232 412 96.0 1e-115 MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGAT LLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFK ADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAH VCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG >gi|296918658|gb|GG773042.1| GENE 43 44069 - 44869 740 266 aa, chain + ## HITS:1 COG:yadT KEGG:ns NR:ns ## COG: yadT COG0614 # Protein_GI_number: 16128151 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 266 1 266 266 480 99.0 1e-135 MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKI GQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALR QLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVL EVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLT SDWFERASPRIILAAQQLCNALSQVD >gi|296918658|gb|GG773042.1| GENE 44 44907 - 45530 672 207 aa, chain + ## HITS:1 COG:yadS KEGG:ns NR:ns ## COG: yadS COG2860 # Protein_GI_number: 16128150 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 207 1 207 207 337 100.0 1e-92 MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVK DPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAV CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAYYTFSVPLETASMMGM VVTLLIRLAAIRWHLKLPTFALDENGR >gi|296918658|gb|GG773042.1| GENE 45 45577 - 45921 473 114 aa, chain - ## HITS:1 COG:STM0204 KEGG:ns NR:ns ## COG: STM0204 COG0316 # Protein_GI_number: 16763594 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 114 16 129 129 221 99.0 4e-58 MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDM TIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI >gi|296918658|gb|GG773042.1| GENE 46 46003 - 47424 1528 473 aa, chain - ## HITS:1 COG:ECs0159 KEGG:ns NR:ns ## COG: ECs0159 COG0038 # Protein_GI_number: 15829413 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Escherichia coli O157:H7 # 1 473 1 473 473 787 99.0 0 MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGTLVGLAAVAFDKGVAWL QNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQR PVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDVFRLKGDEARHTLLAT GAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALID VGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGG LCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPM LALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQ LILPMIITGLGATLLAQFTGGKPLYSAILARTLAKQEAEQLARSKAASARENT >gi|296918658|gb|GG773042.1| GENE 47 47649 - 48929 1445 426 aa, chain + ## HITS:1 COG:ECs0158 KEGG:ns NR:ns ## COG: ECs0158 COG0001 # Protein_GI_number: 15829412 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Escherichia coli O157:H7 # 1 426 1 426 426 845 99.0 0 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWG PMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATM SAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKHTLTCT YNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPEFLPGLRALCDEFGALLIIDEVM TGFRVALAGAQDYYGVEPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSG NPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLREAAEEAGIPMVVNHVGGMFGIFFT DAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAFEAGFMSVAHSMEDINNTIDAAR RVFAKL >gi|296918658|gb|GG773042.1| GENE 48 48967 - 50949 2017 660 aa, chain - ## HITS:1 COG:fhuB KEGG:ns NR:ns ## COG: fhuB COG0609 # Protein_GI_number: 16128146 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli K12 # 1 660 1 660 660 963 99.0 0 MSKRIALFPVLLLALLVVAAAALTWMNFSQALPRSQWAQAAWSPDIDVIEQMIFHYSLLP RLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGITVTTLWAIPGAMASQFA ALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAINQLLVIFHHDQLQSMFLWST GTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALSLA IVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWLSDQIILWLTR VWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDMKVNDRVATERQHVLAFALAGGVLLLM AVVVALSFGRDAHGWTWASGALLEDLMPWRWPRIMAALFAGVMLAVAGCIIQRLTGNPMA SPEVLGISSGAAFGVVLMLFLVPGNAFGWLLPAGSLGAAVTLLIIMIAAGRGGFSPHRML LAGMALSTAFTMLLMMLQASGDPRMAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPL CRRWLTILPLGGDTARAVGMALTPTRIALLLLAACLTATATMTIGPLSFVGLMAPHIARM MGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR >gi|296918658|gb|GG773042.1| GENE 49 50946 - 51836 884 296 aa, chain - ## HITS:1 COG:fhuD KEGG:ns NR:ns ## COG: fhuD COG0614 # Protein_GI_number: 16128145 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 296 1 296 296 581 98.0 1e-166 MSGLPLISRRRLLTAMALSPLLWQMNTAHAAVIDPNRIVALEWLPVELLLALGIVPYGVA DTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSPEMLARIAPGR GFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAHYEDFIRSMKPRFVKRGARPLLLT TLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFDH DNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYGATLSAMHFVRILDNAIGGKA >gi|296918658|gb|GG773042.1| GENE 50 51836 - 52633 194 265 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 30 235 41 249 329 79 28 2e-13 MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRH QPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRF GAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDI AHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGET LEMIYGIPMGILPHPAGAAPVSFVY >gi|296918658|gb|GG773042.1| GENE 51 52693 - 54936 2505 747 aa, chain - ## HITS:1 COG:ECs0154 KEGG:ns NR:ns ## COG: ECs0154 COG1629 # Protein_GI_number: 15829408 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 1 747 1 747 747 1458 99.0 0 MAPSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAAT IAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTY DHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGG LLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKG SEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFN EGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSK QCAALAPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDI NAWFGYDDSVPLLDLYNPVNTDFDFNAKDPDNSGPYRILNKQKQTGVYVQDQAQWDKVLV TLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVG KDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRA RGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPL SGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDRE YVASCFNTYGCFWGAERQVVATATFRF >gi|296918658|gb|GG773042.1| GENE 52 55156 - 57690 2674 844 aa, chain - ## HITS:1 COG:mrcB KEGG:ns NR:ns ## COG: mrcB COG0744 # Protein_GI_number: 16128142 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Escherichia coli K12 # 1 844 1 844 844 1517 99.0 0 MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEEPMPRKGKGKGKGRKPR GKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTIS KNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHL ATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEH DGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDAR YSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIY NPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPRGGVISPQPAFMQLVRQ ELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRF SGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIAL RQPNGQVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPK DQLNPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAER AVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTI TWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGM RVLPVWTSDPQSLCQQSEMQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDM FGSN >gi|296918658|gb|GG773042.1| GENE 53 57784 - 60258 2265 824 aa, chain - ## HITS:1 COG:ECs0152 KEGG:ns NR:ns ## COG: ECs0152 COG1643 # Protein_GI_number: 15829406 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Escherichia coli O157:H7 # 1 824 1 824 824 1457 97.0 0 MLQCGAKNVNPLERFVSSLPVAAVLPELLAALDGASQVLLSAPTGAGKSTWLPLQLLAHP GINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLT RMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQ QMLPEAPVVISEGRSFPVERRYLPLPAHQRFDEAVAVATAEMLRQESGSLLLFLPGVGEI QRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIR LVVDCAQERVARFDPRTGLTRLVTQRVSQASMTQRAGRAGRLEPGICLHLIAKEQAERAA AQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPTVNLLAAKRLLRMLGALDGERLS AQGQKMATLGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMGNSDLGVAFSRNQPAW QQRSQQLLKRLNVRGGEADSSLIAPLLARAYADRIARRRGQDERYQLANGMGAMLDADDA LSRHEWLIAPLLLQGSASPDARILLALPVDIDELVQRCPQLVQQSDTVEWDDAQGTLKAW RRLQIGQLMVKVQPLAKPSEDELHQAMLNGIRDKGLSVLNWTAEAEQLRLRLLCAAKWLP EYDWPAVDDESLLATLETWLLPHMTGVHSLRGLKSLDIYQALRGLLDWVMQQRLDSELPA HYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATNPTIAQGRVPLVLELLSPAQRPLQIT RDLSAFWKGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS >gi|296918658|gb|GG773042.1| GENE 54 60287 - 60817 377 176 aa, chain + ## HITS:1 COG:ligT KEGG:ns NR:ns ## COG: ligT COG1514 # Protein_GI_number: 16128140 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 2'-5' RNA ligase # Organism: Escherichia coli K12 # 1 176 4 179 179 332 98.0 3e-91 MSEPQRLFFAIDLPAEIREQIIRWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR PFHPHITLLRDASEAVTIPPPGFNWSYTVTEFTLYASSFARGRTRYTPLKRWALTQ >gi|296918658|gb|GG773042.1| GENE 55 60832 - 61536 348 234 aa, chain + ## HITS:1 COG:ECs0150 KEGG:ns NR:ns ## COG: ECs0150 COG1489 # Protein_GI_number: 15829404 # Func_class: R General function prediction only # Function: DNA-binding protein, stimulates sugar fermentation # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 462 98.0 1e-130 MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTK RKYPHTWELTQSQSGAIICVNTLWANRLTKEAILNESISELAGYSSLKSEVKYGAERSRI DFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAV LHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAELSAEGMALKKSLPVTL >gi|296918658|gb|GG773042.1| GENE 56 61714 - 62169 662 151 aa, chain + ## HITS:1 COG:ECs0149 KEGG:ns NR:ns ## COG: ECs0149 COG1734 # Protein_GI_number: 15829403 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Escherichia coli O157:H7 # 1 151 1 151 151 261 100.0 5e-70 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE IGIRRLEARPTADLCIDCKTLAEIREKQMAG >gi|296918658|gb|GG773042.1| GENE 57 62206 - 63132 678 308 aa, chain + ## HITS:1 COG:ECs0148 KEGG:ns NR:ns ## COG: ECs0148 COG0008 # Protein_GI_number: 15829402 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli O157:H7 # 1 308 1 308 308 615 97.0 1e-176 MLPPYFLFKEMTDTHYIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPP REVPGAAETILRQLEHYGLHWDGDVLWQSQRHHAYREALAWLHEQGLSYYCTCTRARIQS IGGIYDGHCRDLHHGPDNAAVRIRQQHPVTQFTDLLRGIIHADEKLAREDFIIHRRDGLF AYNLAVVVDDHFQGVSEIVRGADLIEPTVRQISLYQLFGWKVPDYIHLPLALNPQGAKLS KQNHAPALPKGDPRPVLIAALHFLGQQVETHWQDFSVEQILQSAVKNWTLTAVPESAIVN STFSNASC >gi|296918658|gb|GG773042.1| GENE 58 63225 - 64589 1418 454 aa, chain + ## HITS:1 COG:ECs0147 KEGG:ns NR:ns ## COG: ECs0147 COG0617 # Protein_GI_number: 15829401 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Escherichia coli O157:H7 # 1 454 1 454 454 862 100.0 0 MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD LLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNV SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGV IRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESL KLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMR VNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTR DIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAP PDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA >gi|296918658|gb|GG773042.1| GENE 59 64586 - 65065 193 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 4 139 122 255 278 79 36 2e-13 MTVAYIAIGSNLASPLEQVNAALKALGDIPESRILAVSSFYRTPPLGPQDQPDYLNAAVA LKTTLAPEGLLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMK NRGFMLWPLFEIAPELVFPDGLSLVEALQAKGFNELDKW >gi|296918658|gb|GG773042.1| GENE 60 65427 - 66017 740 196 aa, chain + ## HITS:1 COG:yadN KEGG:ns NR:ns ## COG: yadN COG3539 # Protein_GI_number: 16128134 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 196 1 194 194 282 85.0 3e-76 MSKKLGFALSGIMLAMAAGTAFAANDMDGGQLNISGLVVDNTCEARVDGGNKDGLILLQT ATVAEITDGVLDTTVGAKAKPFSITIDCSKANPAPGTTAKMTFGSVFFGYSKGTLNNDMS INTPSDGVNIALHNIEGSTIKQVQVNNPGDVYSKTLDSTSKSATYDFKASYVRADASKAA TAGYVKTNSAYTITYQ >gi|296918658|gb|GG773042.1| GENE 61 66126 - 66866 431 246 aa, chain + ## HITS:1 COG:ecpD KEGG:ns NR:ns ## COG: ecpD COG3121 # Protein_GI_number: 16128133 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 246 1 246 246 428 85.0 1e-120 MFFNTKHTAALCLASCMAFSSSAIADIVISGTRVVYKSEQKSVNVRLENKGNNPLLVQSW LDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTASSALPKDRESVFWFNVLEVP PKPDAAKAANQSLLQLAFRTRIKLFYRPEGLSGISSDAPLALKWSWATSEGKAALRVDNP TPYYVSFSSGDLEANGKRYPLDMTMIAPFSNDVIKVNGMSGRTSSAKVHFFAINDFGGSI EGNANL >gi|296918658|gb|GG773042.1| GENE 62 67012 - 69489 1602 825 aa, chain + ## HITS:1 COG:htrE KEGG:ns NR:ns ## COG: htrE COG3188 # Protein_GI_number: 16128132 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 825 41 865 865 1424 87.0 0 MGKDASNIDLSRYTEGNPTLPGIYDVSVYVNDQPIMSQSIAFAVIEGKKNAQACITQKNL LQFHISSPDKNSEKAILLKRDDDLGDCLNLAEMIPQSSIRYDVNDQRLDIDVPQAWIMKN YQNYVDPSLWENGINAAMLSYNLNGYHSESPGRTNDSIYAAFNGGINLGAWRLRASGNYN WMTNVHSDYDFQNRYLQRDLASLRSQLVIGESYTTGETFDSVRIRGIRLYSDSRMLPPVL ASFAPIIHGVANTNAKVTVMQNGYKIYETTVPPGAFAIDDLSPSGYGSDLIVTIEEADGT KRTFSQPFSSVVQMLRPGVGRWDISAGQVLKDSIQDEPNLFQASYYYGLNNYLTGYTGIQ LTDNNYTAGLLGLGMNTPVGAFSVDVTHSNVSIPDDKTYQGQSYRISWNKLFENTSTSLN IAAYRYSTQHYLGLNDALTLIDEVEHPEQDLEPKSMRNYSRMKNQVTVSINQPLKFEKKD YGSFYLSGSWSDYWASGQNSTNYSIGYSNSASWGSYSISAQRSLNEDGQTDDSIYLSFTI PIENLLGTEHRSSGFQSIDTQLNSDFKGNNQLNISSSGYSDTNRISYSVNTGYMMNKSSD DLSYIGGYASYESPWGTLSGSASASSDNSRQFSLNTDGGFVLHSGGLTFSNDSFSDSDTL AVIQAPGAKGARINYGNSTVDRWGYGVTSALSPYHENRIALDINDLENDVELKSTSTVAV PRQGAVVFADFETVQGQSAIMNIVRSDGKNIPFAADIYDEQNNIIGNVGQGGQAFVRGIG QEGNIRITWIEEGKPVSCFAHYQQNTTSEKIAQSIILNGLRCQIQ >gi|296918658|gb|GG773042.1| GENE 63 69542 - 70072 280 176 aa, chain + ## HITS:1 COG:yadM KEGG:ns NR:ns ## COG: yadM COG3539 # Protein_GI_number: 16128131 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 176 27 203 203 229 75.0 2e-60 MGLLLSPSVFATDVNVDFTATVKATTCNITLTGTNVTDNGKDKYTLVIPSMGMDKIANKT AQSEANFKLVANGCSSGISWIDTTLTGNQSGSSPALIIPLASDTTSTTSYIGMGFKRKAT SGDTFLKPNSAEYIRWSASEISTDGLEMTVALRETSVGKGVPGKFRALATFNFSYQ >gi|296918658|gb|GG773042.1| GENE 64 70087 - 70692 502 201 aa, chain + ## HITS:1 COG:no KEGG:ECP_0147 NR:ns ## KEGG: ECP_0147 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 201 2 202 202 301 100.0 1e-80 MILKKLCYGLSGSLFLASSLLTISSHAATDSIGLTVTTDVEMGTCTSTLTDDGTTKISTI NFGDVYISEINAETKIKTFKLQFKDCAGIPGKKAKIKLTTRALCEGNSNNGPGFANASTA TAKAAAVAVEVWSTSTPGKNGAKQFSCVTPATEEVSIANATGSNVVDYPMSAVLVVAKDK TVTNVTAGDFTAPATFTVTYN >gi|296918658|gb|GG773042.1| GENE 65 70719 - 71315 315 198 aa, chain + ## HITS:1 COG:no KEGG:ECP_0146 NR:ns ## KEGG: ECP_0146 # Name: not_defined # Def: fimbrial protein; region: fimbrial; cl01416 # Organism: E.coli_536 # Pathway: not_defined # 1 198 1 198 198 357 99.0 1e-97 MRPTQRNLMKKSILLLSLLFSATSPVVAGQDVDIVANIKNNTCQSGISNNGNIDLGVVGV GDFTGNISAENYHPGGKEFTITVQDCTLQGTGNVLNQLHINFRALSGVMATGSSQIFANE DNAGAKNVGVVIFSIQDPANTFNVLSATGSSRSVYPVMSSALNNSSWKFSTRMQKIDPAL NVTSGPLISHVLVDIYYE >gi|296918658|gb|GG773042.1| GENE 66 71956 - 72630 326 224 aa, chain + ## HITS:1 COG:yadC KEGG:ns NR:ns ## COG: yadC COG3539 # Protein_GI_number: 16128128 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 224 189 412 412 275 66.0 6e-74 MQTLTIEFYTDTDFNPTTNQRVTLSRTDNYLYSFKAYGAGIGINDYSYFLKIDFDLTDIV LTNPTCFTAALSGSSVSGSTVKMGDYTPAQIKNGATAVPFDITLQNCIRVRNIETKLKSN KVGSVSKELLANTLTGNDAAKGVGVLIEGLKNTKSAQMVLKPNDATSIYKDYETEDDTTG GIYPDKGNGTSQPLHFQATLKQDGNIAIEPGDFKATSTFQVTYP >gi|296918658|gb|GG773042.1| GENE 67 72768 - 73562 868 264 aa, chain + ## HITS:1 COG:ECs0138 KEGG:ns NR:ns ## COG: ECs0138 COG0413 # Protein_GI_number: 15829392 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 510 97.0 1e-144 MKPTTIASLQKCKQDKKRFATITAYDYSFAKLFAEEGLNVMLVGDSLGMTVQGHDSTLPV TVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLV ETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDRLLSDALALEAAGAQLLVL ECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAETGDI RAAVRQYMAEVESGVYPGEEHSFH >gi|296918658|gb|GG773042.1| GENE 68 73574 - 74425 1086 283 aa, chain + ## HITS:1 COG:ECs0137 KEGG:ns NR:ns ## COG: ECs0137 COG0414 # Protein_GI_number: 15829391 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 544 98.0 1e-155 MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEAKARADVVVVSIFVNPM QFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNGTETHTYVDVPGLSTMLEG ASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIRKMVADMGFDIEIVGVPIMRA KDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAGERDLDEIIAIAGQELNEKGFRS DDIQIRDADTLLEVSENSKRAVILVAAWLGDARLIDNKLVELA >gi|296918658|gb|GG773042.1| GENE 69 74507 - 75391 738 294 aa, chain - ## HITS:1 COG:yadD KEGG:ns NR:ns ## COG: yadD COG5464 # Protein_GI_number: 16128125 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 294 1 298 300 553 95.0 1e-157 MDAPSTTPHDAVFKQFLMHAETARDFLDIHLPAELRELCDLDTLHLESGSFIEESLKGHS TDVLYSVQMQGSTGYLHVVIEHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPIL FYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITITPDDEIMQHRRIAILELLQK HIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVVRDRETGGES MMTLAQWFEEKGIQQGRQEVSQEFALRLLSKGMSREDVAEMANLPLAEIDKMIN >gi|296918658|gb|GG773042.1| GENE 70 75512 - 75715 59 67 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C0145 NR:ns ## KEGG: UTI89_C0145 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 7 67 1 61 61 96 98.0 3e-19 MSHFHAVEFALQHRANHNFYLSTLSLTKQAMPALRKFSRSIARFLLSVYSSDGICSSSLR TVPKRAM >gi|296918658|gb|GG773042.1| GENE 71 75665 - 76045 461 126 aa, chain + ## HITS:1 COG:ECs0135 KEGG:ns NR:ns ## COG: ECs0135 COG0853 # Protein_GI_number: 15829389 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Escherichia coli O157:H7 # 1 126 1 126 126 249 100.0 8e-67 MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAI AAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMKRTAKA IPVQVA >gi|296918658|gb|GG773042.1| GENE 72 75982 - 77289 651 435 aa, chain - ## HITS:1 COG:ECs0134 KEGG:ns NR:ns ## COG: ECs0134 COG0726 # Protein_GI_number: 15829388 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli O157:H7 # 1 400 1 400 409 800 97.0 0 MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTA ASYYVFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNLITRKDTPVYNAPSVG SAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLTYHHILR DEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD GLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQS HTHFLHRIDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVLYLSYPFGGFNDKAVKAA KEAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSPRRGGGGVTSRRDNNQATCT GIAFAVRFISLSPSK >gi|296918658|gb|GG773042.1| GENE 73 77353 - 77793 295 146 aa, chain - ## HITS:1 COG:yadI KEGG:ns NR:ns ## COG: yadI COG2893 # Protein_GI_number: 16128122 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli K12 # 1 146 1 146 146 296 97.0 9e-81 MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNMLSRMMCDALHETDSGEG VIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMACRETMTSSAFREHIVELG APEVSSLWHQQQKNPPFVLKHNLYEY >gi|296918658|gb|GG773042.1| GENE 74 77898 - 78668 813 256 aa, chain - ## HITS:1 COG:ECs0132 KEGG:ns NR:ns ## COG: ECs0132 COG0842 # Protein_GI_number: 15829386 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 431 100.0 1e-121 MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQ FIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFV GILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTP LTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAF YLICWSLIQRGRGLRS >gi|296918658|gb|GG773042.1| GENE 75 78665 - 79591 946 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 302 1 304 311 369 63 1e-100 MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSG RVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKY LKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLK DLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDLAPKS PLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLSEQGIQVLSMRNKANRLEELFVSLV NEKQGDRT >gi|296918658|gb|GG773042.1| GENE 76 79700 - 80362 571 220 aa, chain + ## HITS:1 COG:yadF KEGG:ns NR:ns ## COG: yadF COG0288 # Protein_GI_number: 16128119 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli K12 # 1 220 1 220 220 454 99.0 1e-128 MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGEL FVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLINNWL LHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWA YGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHINHK >gi|296918658|gb|GG773042.1| GENE 77 80430 - 80966 800 178 aa, chain - ## HITS:1 COG:ECs0129 KEGG:ns NR:ns ## COG: ECs0129 COG0634 # Protein_GI_number: 15829383 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 178 5 182 182 337 100.0 9e-93 MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSH EVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREP KSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIGKVILLDE >gi|296918658|gb|GG773042.1| GENE 78 81172 - 83562 2498 796 aa, chain + ## HITS:1 COG:gcd KEGG:ns NR:ns ## COG: gcd COG4993 # Protein_GI_number: 16128117 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Escherichia coli K12 # 1 796 1 796 796 1520 99.0 0 MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYPIAGLVMLGVAWMLWRS KRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGIWLILPFVWRRLVIPASGA VAALVVALLISGGILTWAGFNDPQEISGTLSADTTPAEAISPVADQDWPAYGRNQEGQRF SPLKQINTDNVHKLKEAWVFRTGDVKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFALD AASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILPVNDGRLI AINAENGKLCETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRE TSGVIRGFDVNTGELLWAFDPGAKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPM GVTTPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMDLPAQPTLADITV NGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTPTQPFSELSFRPT KDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPN REVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPF GLPCKQPAWGYISALDLKTNEVVWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAG NVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGT KMGDYIVAYALPDDVK >gi|296918658|gb|GG773042.1| GENE 79 83609 - 85159 1585 516 aa, chain - ## HITS:1 COG:yacK KEGG:ns NR:ns ## COG: yacK COG2132 # Protein_GI_number: 16128116 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Escherichia coli K12 # 1 516 1 516 516 1046 99.0 0 MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDARNRIQLTIGAGQSTFG GKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEVDGGPQGIIP PGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDD VPVIVQDKKFNADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCN ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV SQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLD MMGMQMLMEKYGDQAMAGMDHSQMTGHMGHGNMNHMNHSGKFDFHHANKINGQAFDMNKP MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPATHRAGWKDTVKVEGNVS EVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV >gi|296918658|gb|GG773042.1| GENE 80 85325 - 85672 358 115 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0122 NR:ns ## KEGG: ECSE_0122 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 115 42 156 156 231 100.0 9e-60 MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALV FFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK >gi|296918658|gb|GG773042.1| GENE 81 85778 - 86644 869 288 aa, chain + ## HITS:1 COG:ECs0125 KEGG:ns NR:ns ## COG: ECs0125 COG0421 # Protein_GI_number: 15829379 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Escherichia coli O157:H7 # 1 288 1 288 288 600 99.0 1e-171 MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDE FIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQY LPNHNAGSYDDPRFKLVIDDGVNFVNQTNQTFDVIISDCTDPIGPGESLFTSAFYEGCKR CLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDND ALRHLSTEIIQARFLASGLKCRYYNPAVHTAAFALPQYLQDALASQPS >gi|296918658|gb|GG773042.1| GENE 82 86660 - 87454 887 264 aa, chain + ## HITS:1 COG:ECs0124 KEGG:ns NR:ns ## COG: ECs0124 COG1586 # Protein_GI_number: 15829378 # Func_class: E Amino acid transport and metabolism # Function: S-adenosylmethionine decarboxylase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 534 99.0 1e-152 MKKLKLHGFNNLTKSLSFCIYDICYAKTTEERDGYIAYIDELYNANRLTEILSETCSIIG ANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYP ESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGMKHF IDHEINSIQNFMSEDMKALYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTDSE RQEITAALWKEMREIYYGRNMPAV >gi|296918658|gb|GG773042.1| GENE 83 87459 - 87854 486 131 aa, chain - ## HITS:1 COG:ECs0123 KEGG:ns NR:ns ## COG: ECs0123 COG3112 # Protein_GI_number: 15829377 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 120 17 136 136 225 100.0 1e-59 MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAG HEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK KVTQGAPPCPA >gi|296918658|gb|GG773042.1| GENE 84 88029 - 90626 2844 865 aa, chain - ## HITS:1 COG:ECs0122 KEGG:ns NR:ns ## COG: ECs0122 COG1049 # Protein_GI_number: 15829376 # Func_class: C Energy production and conversion # Function: Aconitase B # Organism: Escherichia coli O157:H7 # 1 865 1 865 865 1703 99.0 0 MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEFLLDLLTNRVPPGVDEA AYVKAGFLAAVAKGEAKSPLLTPEKAIELLGTMQGGYNIHPLIDALDDAKLAPIAAKALS HTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRPALAEKLTVTVFKVTGETNTD DLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVGPIKQIEALQQKGFPLAYVGDVV GTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGGKIAPIFFNTMEDAGALPIEVDVSN LNMGDVIDVYPYKGEVRNHETGELLATFELKTDVLIDEVRAGGRIPLIIGRGLTTKAREA LGLPHSDVFRQAKDVAESDRGFSLAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPM TRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVNTHHTLPDFIMNRGGVSLRPGDGVIH SWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKM QPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAFELTDASA ERSAAGCTIKLNKEPIIEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEA DADAEYAAVIDIDLADIKEPILCAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAA GKLLDAHKGQLPTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVA DGATVVSTSTRNFPNRLGTGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDT YRYLNFDQLSQYTEKADGVIFQTAV >gi|296918658|gb|GG773042.1| GENE 85 90981 - 92738 751 585 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0126 NR:ns ## KEGG: ECS88_0126 # Name: yacH # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 585 1 585 585 952 100.0 0 MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVEAQSTQQTAPDISAVTLPATVS APPVTPAVVKSAFSTAQIDQWVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQ GDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQRLRQ LAQQTGSLKSSTEQKIIATTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSS IDWDDDDHDHHHHDDDDYHHHDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAW RHNPNYRNGVTYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRHAAASQFQQRTHAAPV ITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRE KIQANPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDAARQRIQSASPEQRQ VFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER >gi|296918658|gb|GG773042.1| GENE 86 92980 - 94404 682 474 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 452 3 444 458 267 33 4e-70 MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVA KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT GANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLV MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTA VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQ LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGE LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK >gi|296918658|gb|GG773042.1| GENE 87 94639 - 96531 2308 630 aa, chain - ## HITS:1 COG:ECs0119 KEGG:ns NR:ns ## COG: ECs0119 COG0508 # Protein_GI_number: 15829373 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Escherichia coli O157:H7 # 1 630 1 630 630 945 99.0 0 MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVS VGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAAAAAKDVNVPDIGSDEVEV TEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVSTGSLIMVFEVA GEAGAVAPAAKQEAAPAAAPASAAGVKEVNVPDIGGDEVEVTEVMVKVGDKVAAEQSLIT VEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEGAAPAAAPAKQEAAAPAPA AKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIRRLAREFGVNLAKVKGTGRKGRILRED VQAYVKEAIKRAEAAPAATGGGIPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLSRNW VMIPHVTHFDKTDITELEAFRKQQNEEAAKRKLDVKITPVVFIMKAVAAALEQMPRFNSS LSEDGQRLTLKKYINIGVAVDTPNGLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTA GEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFVPRLMLPISLS FDHRVIDGADGARFITIINNTLSDIRRLVM >gi|296918658|gb|GG773042.1| GENE 88 96546 - 99209 3263 887 aa, chain - ## HITS:1 COG:ECs0118 KEGG:ns NR:ns ## COG: ECs0118 COG2609 # Protein_GI_number: 15829372 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Escherichia coli O157:H7 # 1 887 1 887 887 1836 99.0 0 MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEARKGGVNVAAGTGISNY INTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDV CFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGLSSYPH PKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESK GAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWD ELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWAL NRGGHDPKKIYAAFKKAQETKGKATVILAHTIKGYGMGDAAEGKNIAHQVKKMNMDGVRH IRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQRQKLHGYLPSRQPNFTEKLELPSLQ DFGALLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYS PNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGCSWLAAATSYSTNNLPMIPFYIYY SMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYD PAYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETL EGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHP LETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRH HFEVDASYVVVAALGELAKRGEIDKKVVADAIAKFNIDADKVNPRLA >gi|296918658|gb|GG773042.1| GENE 89 99370 - 100134 700 254 aa, chain - ## HITS:1 COG:ECs0117 KEGG:ns NR:ns ## COG: ECs0117 COG2186 # Protein_GI_number: 15829371 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 402 100.0 1e-112 MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEA KGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAAYYAALRST DEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQN VRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSREES RRERSLRRLEQRKN >gi|296918658|gb|GG773042.1| GENE 90 100590 - 100880 319 96 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0120 NR:ns ## KEGG: ECS88_0120 # Name: not_defined # Def: colicin E7 immunity protein (ImmE7) (microcin E7 immunity protein) # Organism: E.coli_S88 # Pathway: not_defined # 1 96 3 98 98 169 100.0 3e-41 MHDLKYKIYFYTEGEFLEMLEEIVNATSKDKSLKGKKLEKYLDTLVDHFIKITEHPKKGD LIFYPNSPEDGKPENILKIVKEWRRSQGLPLFKDSE >gi|296918658|gb|GG773042.1| GENE 91 101289 - 101579 342 96 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0118 NR:ns ## KEGG: ECS88_0118 # Name: not_defined # Def: colicin E7 immunity protein (ImmE7) (microcin E7 immunity protein) # Organism: E.coli_S88 # Pathway: not_defined # 1 96 1 96 96 171 100.0 9e-42 MYNFKDEIEDYTEREFIELLGEFTNPTGDNAQLKGEELDKYWDDLEEHLTRITQHPLMSD LIYYPAKKGDDEPENILKIVKEWRRSQGLPLFKDSK >gi|296918658|gb|GG773042.1| GENE 92 101987 - 102271 248 94 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_0117 NR:ns ## KEGG: EcSMS35_0117 # Name: not_defined # Def: putative colicin immunity protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 94 1 94 94 171 100.0 8e-42 MFKEKLQDYTEDEFLNFLGGLRSSMKDGKSLKGKELEMYWDSLVDHFIEITQHPSGSDLI FYPKSQGDDKPENILKIVKEWRRSQGLPLFKDSK >gi|296918658|gb|GG773042.1| GENE 93 102274 - 104055 946 593 aa, chain - ## HITS:1 COG:yhhZ_1 KEGG:ns NR:ns ## COG: yhhZ_1 COG3157 # Protein_GI_number: 16131314 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli K12 # 1 169 1 169 170 223 58.0 1e-57 MGDIVYLRIIGEKQGDISSGCGTYASVGNRWQVGHEDEIFAFALTNAITSTGKGVNLQGL QFCKLIDKSSPLLSNAINQNERLFIEIDLYRINKSGRWERYYYIQLRNASLTAIHVNISD NNLPTECVNVNYDYILCKHLIANTEFDWLAFPAGYNSLFIPPKNPPASNLNPEPLPVVNL PLSPPAVKPVYAKSCLKEKGCTDAGTAEEPAENFGQVAIFALPVVDDCCGYHHPEANDVG QPAEAQTMLLFPGSVLAAQIWGKWSLSGILSATCGSYIGALASALYIPSAGEGSARVPGR DEFWYEEELRQKALAGSTATTRVRFFWGTDIHGKPQVYGVHTGEGTPYENVRVANMQWNE QTQRYEFTPAHDVDGPLITWTPENPEHGYVPGHTGNDRPPLEQPTILVTPIPDGTDTYTT PPFPVPDPKEFNDYILVFPAGSGIKPIYVYLKEDPRKLPGVVTGRGVPLSPGTRWLDMSV SNNGNGAPIPAHIADKLRGREFKTFDEFREALWLEVSQDPELIAQFSSGNQTRIKQGLTA KAPIDGWYYGPKEIVKKFQIHHRVAVEYGGSVYDIDNLRIVTPRLHDEIHYRR >gi|296918658|gb|GG773042.1| GENE 94 104583 - 105953 1576 456 aa, chain + ## HITS:1 COG:aroP KEGG:ns NR:ns ## COG: aroP COG1113 # Protein_GI_number: 16128105 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 456 2 457 457 823 99.0 0 MEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFL IMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFW YPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGAWLLFSGNGG PQASVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV IYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYN SCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGL LMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVIML MTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH >gi|296918658|gb|GG773042.1| GENE 95 106011 - 106865 828 284 aa, chain - ## HITS:1 COG:ampE KEGG:ns NR:ns ## COG: ampE COG3725 # Protein_GI_number: 16128104 # Func_class: V Defense mechanisms # Function: Membrane protein required for beta-lactamase induction # Organism: Escherichia coli K12 # 1 284 1 284 284 516 99.0 1e-146 MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLCMTIIAMGVTFLLLRA LQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVP AGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQT PHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLA QFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV >gi|296918658|gb|GG773042.1| GENE 96 106862 - 107413 550 183 aa, chain - ## HITS:1 COG:ECs0114 KEGG:ns NR:ns ## COG: ECs0114 COG3023 # Protein_GI_number: 15829368 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 377 98.0 1e-105 MLLEQGWLAGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT DTLAYTDAQYQQLAAVTRALIDRYPDIANNMTGHCDIAPDRKTDPGPAFDWARFRALVSK ETT >gi|296918658|gb|GG773042.1| GENE 97 107501 - 108394 459 297 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 27 295 15 283 286 181 37 3e-44 MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATV ITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQPLFELEGPSRVLLTGERT ALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAVLCGGGANHRLGLS DAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALKAGADIIMLDNFET EQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVDFISVGALTKHVQALDLSMRFR >gi|296918658|gb|GG773042.1| GENE 98 108598 - 109038 472 146 aa, chain + ## HITS:1 COG:ppdD KEGG:ns NR:ns ## COG: ppdD COG4969 # Protein_GI_number: 16128101 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Escherichia coli K12 # 1 146 1 146 146 291 99.0 3e-79 MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEH GGLNTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGW TRNCNIQSDSALQQACEDVFRFDDAN >gi|296918658|gb|GG773042.1| GENE 99 109048 - 110433 767 461 aa, chain + ## HITS:1 COG:hofB KEGG:ns NR:ns ## COG: hofB COG2804 # Protein_GI_number: 16128100 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Escherichia coli K12 # 1 461 1 461 461 881 98.0 0 MNIPQLTALCLRYQGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQME GHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLH PLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLACRGGEKV VLRLLQQVNQALDVNTLGMQPSQLVDFAHALQQPQGLVLVTGPTGSGKTVTLYSALQMLN TADINICSVEDPVEIPIAGLNQTQIHSRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAE IAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRR QQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVES LETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE >gi|296918658|gb|GG773042.1| GENE 100 110423 - 111625 976 400 aa, chain + ## HITS:1 COG:ECs0110 KEGG:ns NR:ns ## COG: ECs0110 COG1459 # Protein_GI_number: 15829364 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 696 96.0 0 MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLSLKRITINSTQWRGDIS AEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAHDLEQGVAFSNALLPWSEV FPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVKSALRYPIIILAMAIMVVVAM LHFVLPEFAAIYKTFNTPLPALTQGIMTLASFSGEWGWLLVLFGFLLAIANKLLMRHPTR LIARQKLLLRIPIMGSLMRGQKLTQIFTILTLTQSAGISFLQGVESVRETMRCPYWVQLL TQIQHDISNGHPIWLALKNAGEFSPLCLQLVRTGEASGSLDLMLDNLAHHHRDNTMALAD NLAALLEPALLIITGGIIGTLVVAMYLPIFHLGDAMSGMG >gi|296918658|gb|GG773042.1| GENE 101 111660 - 112703 1033 347 aa, chain - ## HITS:1 COG:guaC KEGG:ns NR:ns ## COG: guaC COG0516 # Protein_GI_number: 16128097 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Escherichia coli K12 # 1 347 1 347 347 697 100.0 0 MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSWSGVPIIAANMDTVGTF SMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVSTGTSDADFEKTKQILDLN PALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVVTGEMCEELILSGADIVKVGI GPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGADFVM LGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMKRHVGGVAEYRAAEGKTVKLPLRGP VENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRIFNNL >gi|296918658|gb|GG773042.1| GENE 102 112928 - 113548 687 206 aa, chain + ## HITS:1 COG:ECs0107 KEGG:ns NR:ns ## COG: ECs0107 COG0237 # Protein_GI_number: 15829361 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 359 99.0 2e-99 MRYIVALTGGIGSGKSTVANAFANLGINVIDADIIARQVVEPGAPALHAIADHFGANMIA ADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVENSL YKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQATREARLAVADDVIDNNGAPD AIASDVARLHAHYLQLASQFVSQEKP >gi|296918658|gb|GG773042.1| GENE 103 113548 - 114291 766 247 aa, chain + ## HITS:1 COG:yacF KEGG:ns NR:ns ## COG: yacF COG4582 # Protein_GI_number: 16128095 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 247 1 247 247 483 99.0 1e-136 MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFFRNVSELLDVFERGEVR TELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIAL VRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAP FRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDSENGQVPERL DFELACC >gi|296918658|gb|GG773042.1| GENE 104 114301 - 114498 122 65 aa, chain + ## HITS:1 COG:ECs0105 KEGG:ns NR:ns ## COG: ECs0105 COG3024 # Protein_GI_number: 15829359 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 65 1 65 65 117 100.0 7e-27 MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEEKRIPSSGDLSESDDWS EEPKQ >gi|296918658|gb|GG773042.1| GENE 105 114586 - 114984 338 132 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Haemophilus influenzae R2866] # 2 126 4 128 136 134 49 3e-30 MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKVEMGETPEQAVVRELQEEVGI TPQHFSLFEKLEYEFPDRHITLWFWLVESWEGEPWGKEGQPGEWMSLVGLNADDFPPANE PVIAKLKRVYAG >gi|296918658|gb|GG773042.1| GENE 106 115044 - 117749 3454 901 aa, chain - ## HITS:1 COG:ECs0102 KEGG:ns NR:ns ## COG: ECs0102 COG0653 # Protein_GI_number: 15829356 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Escherichia coli O157:H7 # 1 901 1 901 901 1722 99.0 0 MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKGEVL ENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNA LTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNN EYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVN KIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYS PANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK EGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIR KDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLN AKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKAD WQVRHDAVLAAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFAS DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY SQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPI AEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLA AMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEEL EQQRRMEAERLAQMQQLSYQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRL Q >gi|296918658|gb|GG773042.1| GENE 107 117811 - 118398 361 195 aa, chain - ## HITS:1 COG:no KEGG:G2583_0101 NR:ns ## KEGG: G2583_0101 # Name: secM # Def: secretion monitor protein # Organism: E.coli_O55_H7 # Pathway: Protein export [PATH:eok03060]; Bacterial secretion system [PATH:eok03070] # 1 195 33 227 227 387 99.0 1e-106 MLWTSGFNDKICALNTFEYDRDGNNVSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALS NAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSF AMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVW ISQAQGIRAGPQRLS >gi|296918658|gb|GG773042.1| GENE 108 118554 - 119471 817 305 aa, chain - ## HITS:1 COG:ECs0100 KEGG:ns NR:ns ## COG: ECs0100 COG0774 # Protein_GI_number: 15829354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 636 100.0 0 MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIPIMDGSAAPFVYLLLDAGI DELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTIDFNHPAIDSSNQRYAMNFSAD AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDDAELPLAFKAP SAVLA >gi|296918658|gb|GG773042.1| GENE 109 119572 - 120723 1370 383 aa, chain - ## HITS:1 COG:ECs0099 KEGG:ns NR:ns ## COG: ECs0099 COG0206 # Protein_GI_number: 15829353 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Escherichia coli O157:H7 # 1 383 1 383 383 642 100.0 0 MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNTDAQALRKTAVGQTIQI GSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAAGMGGGTGTGAAPVVAEVA KDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSLITIPNDKLLKVLGRGISLLD AFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGSGVASGEDRAEEAA EMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFASDNATVVIGTSLDP DMNDELRVTVVATGIGMDKRPEITLVTNKQVQQPVMDRYQQHGMAPLTQEQKPVAKVVND NAPQTAKEPDYLDIPAFLRKQAD >gi|296918658|gb|GG773042.1| GENE 110 120784 - 122046 1050 420 aa, chain - ## HITS:1 COG:ECs0098 KEGG:ns NR:ns ## COG: ECs0098 COG0849 # Protein_GI_number: 15829352 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Escherichia coli O157:H7 # 1 420 1 420 420 818 100.0 0 MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSRGMDKGGVNDLESVVKC VQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEEEVTQEDVENVVHTAKSVR VRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHLITCHNDMAKNIVKAVERCGL KVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDIAVYTGGALRHTKVIPYAGNVVT SDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVEVPSVGGRPPRSLQRQTLAEVIEPR YTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFHTQVRIGA PLNITGLTDYAQEPYYSTAVGLLHYGKESHLNGEAEVEKRVTASVGSWIKRLNSWLRKEF >gi|296918658|gb|GG773042.1| GENE 111 122043 - 122873 697 276 aa, chain - ## HITS:1 COG:ECs0097 KEGG:ns NR:ns ## COG: ECs0097 COG1589 # Protein_GI_number: 15829351 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Escherichia coli O157:H7 # 1 265 1 265 276 491 100.0 1e-139 MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWVVLGWMEDAQRLPLSKL VLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQRLPWIKQVSVRKQWPDELK IHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPMLYGPEGSANEVLQGYREMGQM LAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMKRLARFVELYPVLQQQAQTDGKR ISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ >gi|296918658|gb|GG773042.1| GENE 112 122875 - 123795 1032 306 aa, chain - ## HITS:1 COG:ddlB KEGG:ns NR:ns ## COG: ddlB COG1181 # Protein_GI_number: 16128085 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli K12 # 1 306 1 306 306 578 98.0 1e-165 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFI ALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRA EFEKGLNDKQLAEISSLGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIE KWLSGPEFTIAILGEEILPSIRIQPAGTFYDYEAKYLSDETQYFCPAGLEASQEANLQAL VLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR ILELAD >gi|296918658|gb|GG773042.1| GENE 113 123788 - 125263 1501 491 aa, chain - ## HITS:1 COG:ECs0095 KEGG:ns NR:ns ## COG: ECs0095 COG0773 # Protein_GI_number: 15829349 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Escherichia coli O157:H7 # 1 491 1 491 491 907 100.0 0 MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQL MNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRH GIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDA SFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELL PRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAA VAVATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVD ATIKAARAGWPDKNLVMLFQPHRFTRTRDLYDDFANVLTQVDTLLMLEVYPAGEAPIPGA DSRSLCRTIRGRGKIDPILVPDPAQVAEMLAPVLTGNDLILVQGAGNIGKIARSLAEIKL KPQTPEEEQHD >gi|296918658|gb|GG773042.1| GENE 114 125317 - 126360 999 347 aa, chain - ## HITS:1 COG:ECs0094 KEGG:ns NR:ns ## COG: ECs0094 COG0707 # Protein_GI_number: 15829348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Escherichia coli O157:H7 # 1 347 9 355 355 634 99.0 0 MVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGK GIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG IAGLTNKWLAKIATKVMQAFPGAFPNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVV GGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMA AAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQSQ LSVDAVANTLAGWSREILLTMAERARAASIPDATERVANEVSRAARA >gi|296918658|gb|GG773042.1| GENE 115 126381 - 127625 1616 414 aa, chain - ## HITS:1 COG:ECs0093 KEGG:ns NR:ns ## COG: ECs0093 COG0772 # Protein_GI_number: 15829347 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Escherichia coli O157:H7 # 1 414 1 414 414 735 100.0 0 MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMYDRTLLWLTFGLAAIGF IMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRLPMEFWQRYSATMLLGSII LLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYIANYLVRKGDEVRNNLRGFLK PMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAKLWQFIAIIGMGISAVVLLILAE PYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGELWGQGLGNSVQKLEYLPEAHTDFIF AIIGEELGYVGVVLALLMVFFVAFRAMSIGRKALEIDHRFSGFLACSIGIWFSFQALVNV GAAAGMLPTKGLTLPLISYGGSSLLIMSTAIMMLLRIDYETRLEKAQAFVRGSR >gi|296918658|gb|GG773042.1| GENE 116 127625 - 128941 1413 438 aa, chain - ## HITS:1 COG:murD KEGG:ns NR:ns ## COG: murD COG0771 # Protein_GI_number: 16128081 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Escherichia coli K12 # 1 438 1 438 438 850 99.0 0 MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGGLND EWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT TLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNV TEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHL NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGL PHRFEVVLEHNGVRWVNDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYL NGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQF KNFEQRGNEFARLAKELG >gi|296918658|gb|GG773042.1| GENE 117 128944 - 130026 1326 360 aa, chain - ## HITS:1 COG:STM0125 KEGG:ns NR:ns ## COG: STM0125 COG0472 # Protein_GI_number: 16763515 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Salmonella typhimurium LT2 # 1 360 1 360 360 642 97.0 0 MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIAHLQKLSFGQVVRND GPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVLVVLVGYGVIGFVDDYRKV VRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQLVVPFFKDVMPQLGLFYILLA YFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWATGNMNFASYLHIPYLRHAGELV IVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVE TLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR >gi|296918658|gb|GG773042.1| GENE 118 130020 - 131378 1290 452 aa, chain - ## HITS:1 COG:ECs0090 KEGG:ns NR:ns ## COG: ECs0090 COG0770 # Protein_GI_number: 15829344 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Escherichia coli O157:H7 # 1 452 1 452 452 807 98.0 0 MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALKGERFDAHDFADQAKAG GAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAA ILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAAL VNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNADNNDWLNWQSVIGSRKVWRFS PNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMSVGATL DAIKAGLANLKAVPGRLFPIKLAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLVVGD MAELGAESEACHVQVGEAAKAAGIDCVLSVGKQSHAISTASGVGEHFSDKTALIARLKSL IAEQQVITILVKGSRSAAMEEVVRALQENGTC >gi|296918658|gb|GG773042.1| GENE 119 131375 - 132862 1552 495 aa, chain - ## HITS:1 COG:murE KEGG:ns NR:ns ## COG: murE COG0769 # Protein_GI_number: 16128078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Escherichia coli K12 # 1 495 1 495 495 932 99.0 0 MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGV AAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGK TTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQGATFC AMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQAIIN ADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKATDVNYHDSGATIRFSSSWGDGEIE SRLMGAFNVSNLLLALATLLALGYPLADLLKTAARLQPVCGRMEVFTAPGKPTVVVDYAH TPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEE PRAIINDILAGMLDAGYAKVMEGRAEAVTCAVMQAKENDVVLVAGKGHEDYQIVGNQRLD YSDRVTVARLLGVIA >gi|296918658|gb|GG773042.1| GENE 120 132849 - 134615 1637 588 aa, chain - ## HITS:1 COG:ECs0088 KEGG:ns NR:ns ## COG: ECs0088 COG0768 # Protein_GI_number: 15829342 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1159 99.0 0 MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAWLQVISPDMLVKEGDMR SLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAGGISVGDRWKALANALNIP LDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHLREESRRYYPSGEVTAHLIG FTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLTLSIDERL QALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPKEAMRNRTIT DVFEPGSTVKPMVVMTALQRGVVRENSVLNTVPYRINGHEIKDVARYSELTLTGVLQKSS NVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWSDIERATFSFGYG LMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGG GVKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKY YGGAVSAPVFGAIMGGVLRTMNIEPDALTTGDKNEFVINQGEGTGGRS >gi|296918658|gb|GG773042.1| GENE 121 134631 - 134996 337 121 aa, chain - ## HITS:1 COG:ECs0087 KEGG:ns NR:ns ## COG: ECs0087 COG3116 # Protein_GI_number: 15829341 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 # 1 121 1 121 121 224 100.0 4e-59 MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFICIILTAVTVVTTAHHT RLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIATEKLQMQHVDPSQENIVVQ K >gi|296918658|gb|GG773042.1| GENE 122 134993 - 135931 1112 312 aa, chain - ## HITS:1 COG:ECs0086 KEGG:ns NR:ns ## COG: ECs0086 COG0275 # Protein_GI_number: 15829340 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Escherichia coli O157:H7 # 1 312 2 313 313 593 100.0 1e-169 MENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAI AVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRD GPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTK ELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISF HSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKLGGRQLRALGKLMPGEEEVAENPRAR SSVLRIAERTNA >gi|296918658|gb|GG773042.1| GENE 123 135936 - 136394 358 152 aa, chain - ## HITS:1 COG:ECs0085 KEGG:ns NR:ns ## COG: ECs0085 COG2001 # Protein_GI_number: 15829339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 296 100.0 7e-81 MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPCLLLYPLPEWEIIEQKL SRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHAGLTKEVMLVGQFNKFELW DETTWHQQVKEDIDAEQLATGDLSERLQDLSL >gi|296918658|gb|GG773042.1| GENE 124 136996 - 138000 1042 334 aa, chain - ## HITS:1 COG:ECs0084 KEGG:ns NR:ns ## COG: ECs0084 COG1609 # Protein_GI_number: 15829338 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 655 100.0 0 MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGR TRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDA IIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAE TVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYANSYEREAAAQLFEKWLETHPMPQ ALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDVAERV LEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS >gi|296918658|gb|GG773042.1| GENE 125 138180 - 138671 445 163 aa, chain - ## HITS:1 COG:ECs0082 KEGG:ns NR:ns ## COG: ECs0082 COG0440 # Protein_GI_number: 15829336 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 163 1 163 163 281 99.0 3e-76 MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQI EKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLY TVQLAGTSDKLDAFLASIRDVAKIVEVARSGVVGLSRGDKIMR >gi|296918658|gb|GG773042.1| GENE 126 138674 - 140398 1370 574 aa, chain - ## HITS:1 COG:ZilvI KEGG:ns NR:ns ## COG: ZilvI COG0028 # Protein_GI_number: 15799761 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 EDL933 # 1 574 29 602 602 1158 98.0 0 MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADG LARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVG ISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVDLPKDILNPANKLPYVWPESV SMRSYNPTTSGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHLQLKEAVEVLNLPVVSS LMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATV LHIDIDPTSISKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRAR QCLKYDTHSEKIKPQAVIETLWRLTHGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGL GTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYLGM VKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPQELESKLSEALEQVRNNRL VFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT >gi|296918658|gb|GG773042.1| GENE 127 140716 - 141678 810 320 aa, chain - ## HITS:1 COG:leuO KEGG:ns NR:ns ## COG: leuO COG0583 # Protein_GI_number: 16128070 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 320 54 373 373 623 98.0 1e-178 MTVELSMPEVQTDHPETAELSKPQLRMVDLNLLTVFDAVMQEQYITRAAHALGMSQPAVS NAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPGSGFEPASSERVF HLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRP EFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQTWYDTVDKQA SIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKQNSRTCYLSWHEA AGRDKGHQWMEEQLVSICKR >gi|296918658|gb|GG773042.1| GENE 128 142504 - 144075 1616 523 aa, chain + ## HITS:1 COG:ECs0078 KEGG:ns NR:ns ## COG: ECs0078 COG0119 # Protein_GI_number: 15829332 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Escherichia coli O157:H7 # 1 523 1 523 523 1013 99.0 0 MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVMEVGFPVSSPGDFESVQT IARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIATSPMHIATKLRSTLDEVIE RAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAINAGATTINIPDTVGYTMPFEF AGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAVHAGARQVEGAMNGIGERAGNCS LEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQICNMPIPANKAIVGSGAFAHSSGIH QDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGRAAVKHRMDEMGYKESEYNLDNLYDAF LKLADKKGQVFDYDLEALAFIGKQQEEPEHFRLDYFSVQSGSNDIATAAVKLACGEEVKA EAANGNGPVDAVYQAINRITDYNVELVKYSLTAKGHGKDALGQVDIVANYNGRRFHGVGL ATDIVESSAKAMVHVLNNIWRAAEVEKELQRKAQHNENNKETV >gi|296918658|gb|GG773042.1| GENE 129 144075 - 145166 1222 363 aa, chain + ## HITS:1 COG:leuB KEGG:ns NR:ns ## COG: leuB COG0473 # Protein_GI_number: 16128067 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Escherichia coli K12 # 1 363 2 364 364 738 99.0 0 MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPA TVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAF CPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAFDTEVYHRFEIERIARIAF ESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQF DVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIA QILSLALLLRYSLDADDAASAIERAINRALEEGIRTGDLARGAAAVSTDEMGDIIARYVA EGV >gi|296918658|gb|GG773042.1| GENE 130 145169 - 146569 1585 466 aa, chain + ## HITS:1 COG:leuC KEGG:ns NR:ns ## COG: leuC COG0065 # Protein_GI_number: 16128066 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Escherichia coli K12 # 1 466 1 466 466 927 100.0 0 MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGLRAHGRPVRQPGKTFAT MDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNHPYQGIVHVMGPEQGVTLP GMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIEVQGKAAPGITA KDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMTLCNMAIEMGAKAGLVAPDETTF NYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTVVTLQAEEISPQVTWGTNPGQVISV NDNIPDPASFADPVERASAEKALAYMGLKPGIPLTEVAIDKVFIGSCTNSRIEDLRAAAE IAKGRKVAPGVQALVVPGSGPVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLNP GERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVTGHFADIRNIK >gi|296918658|gb|GG773042.1| GENE 131 146580 - 147185 801 201 aa, chain + ## HITS:1 COG:ECs0075 KEGG:ns NR:ns ## COG: ECs0075 COG0066 # Protein_GI_number: 15829329 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 409 98.0 1e-114 MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPD FVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLL PVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIG LTLQHDDAIASYEEKQPAFMR >gi|296918658|gb|GG773042.1| GENE 132 147293 - 147424 131 43 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0075 NR:ns ## KEGG: ECS88_0075 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 43 41 83 83 85 100.0 7e-16 MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEELMQWEGSHSDY >gi|296918658|gb|GG773042.1| GENE 133 147513 - 149168 1382 551 aa, chain + ## HITS:1 COG:ECs0074 KEGG:ns NR:ns ## COG: ECs0074 COG4533 # Protein_GI_number: 15829328 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 551 1 551 552 1107 99.0 0 MPSARLQQQFIRLWQCCEGKSQETTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVG RGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRH ILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHW RFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIANIVSPTPWTLDIHLTQPDRWLP LLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVN VWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVL SPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAG IMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHC IPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFD FKSAWFAPPDP >gi|296918658|gb|GG773042.1| GENE 134 149332 - 150315 1073 327 aa, chain + ## HITS:1 COG:tbpA KEGG:ns NR:ns ## COG: tbpA COG4143 # Protein_GI_number: 16128062 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type thiamine transport system, periplasmic component # Organism: Escherichia coli K12 # 13 327 13 327 327 607 97.0 1e-174 MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDG VSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTELFAKSGVAAEAVNVPGGWNNDTFVPY DYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAP QAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFIEGH YLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPA TTLEFTPAEVAAQRQAWISEWQRAVSR >gi|296918658|gb|GG773042.1| GENE 135 150291 - 151901 1789 536 aa, chain + ## HITS:1 COG:ECs0071 KEGG:ns NR:ns ## COG: ECs0071 COG1178 # Protein_GI_number: 15829325 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Escherichia coli O157:H7 # 1 536 1 536 536 880 98.0 0 MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGDWVAVWQDSYLWHVVRFSF WQAFLSALLSVVPAIFLARALYRRRFPGRQMLLRLCAMTLILPVLVAVFGILSVYGRQGW LASLWQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMHG WHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDP ARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTALIVLALL LLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELR ARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYA LKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVV ALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKIPGRNVKTD >gi|296918658|gb|GG773042.1| GENE 136 151885 - 152583 183 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 22 227 154 361 398 75 30 3e-12 MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGLLTIDD VDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQKKMHAIAHQMGID NLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSSSCQQQK MTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTDELLSGKASASALLGIKG >gi|296918658|gb|GG773042.1| GENE 137 152697 - 153461 851 254 aa, chain - ## HITS:1 COG:yabI KEGG:ns NR:ns ## COG: yabI COG0586 # Protein_GI_number: 16128059 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli K12 # 1 254 1 254 254 443 99.0 1e-124 MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWYAW LAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVG PTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPQFYFLPGILAGAAIDIPAGMQSGEFKWL LLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPL MPVYIDILRKVVGV >gi|296918658|gb|GG773042.1| GENE 138 153616 - 154038 57 140 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0069 NR:ns ## KEGG: ECS88_0069 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 140 1 140 140 247 100.0 1e-64 MSKYIYILLSFLVLFFIFFYAYISLMSKEHHYTQHELSPFFLYTPESLRNLPNISNVAEY SYYYNVDDMQTRVIVTWRNIDNIFLQKAKLIDFLKRMGPSLQNDCIWFFHDKSDYANNFQ RYCIIEHRDSLQVEYFETIE >gi|296918658|gb|GG773042.1| GENE 139 154045 - 154893 -25 282 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0068 NR:ns ## KEGG: ECS88_0068 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 282 2 283 283 565 100.0 1e-160 MSKRNDITDGIFATTKKYGLVYTEELGWIDLGHAQGQDARILKRKLEQEHFSTYYDEFHD WYFPVDYHQEMGIRKKILGVDLTFHTGVYTKVMVRSCLSPTLKARVALTLMYGTAKRFEA WQNSFIFNWYTDSGFSAEDLVSDLIGFYRVFGTGPDPLLLAKPLSYTKALQIWDTYGAPG NFKNTEFTPFLFTTHPPFKKNQLIKKKLPEWLNYIKPLDESFSILLYNQYNNRPVTNYYK DKNRINHELYSSLSSSGAIKFSESPFERPLFLFLNPHYPHRS >gi|296918658|gb|GG773042.1| GENE 140 155408 - 156304 694 298 aa, chain - ## HITS:1 COG:ECs0068 KEGG:ns NR:ns ## COG: ECs0068 COG2207 # Protein_GI_number: 15829322 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 18 298 1 281 292 597 99.0 1e-171 MQYGQLVSSLNGGSMKSMAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMK GYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAHEWYHQWVYFRPRAY WHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRR MEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISV LSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE >gi|296918658|gb|GG773042.1| GENE 141 156592 - 158292 1635 566 aa, chain + ## HITS:1 COG:ECs0067 KEGG:ns NR:ns ## COG: ECs0067 COG1069 # Protein_GI_number: 15829321 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Escherichia coli O157:H7 # 1 566 1 566 566 1094 98.0 0 MAIAIGLDFGSDSVRALAVDCATGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIES MEAALKTVLAELSAEQRAAVVGIGVDTTGSTPAPIDADGNVLALRPEFAENPNAMFVLWK DHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIEL CDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFT DTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDI LIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLSWPLEQLAAQH PELKEQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLA TDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPL QIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQ QWAMSAEQHYPPTSAPAQAAQAVPTL >gi|296918658|gb|GG773042.1| GENE 142 158303 - 159805 1445 500 aa, chain + ## HITS:1 COG:araA KEGG:ns NR:ns ## COG: araA COG2160 # Protein_GI_number: 16128056 # Func_class: G Carbohydrate transport and metabolism # Function: L-arabinose isomerase # Organism: Escherichia coli K12 # 1 500 1 500 500 1058 99.0 0 MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEI TAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDF MNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCR FGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMT PATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQG YGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAV EEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLP KLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDT RLPAFKDALRWNEVYYGFRR >gi|296918658|gb|GG773042.1| GENE 143 160090 - 160785 702 231 aa, chain + ## HITS:1 COG:araD KEGG:ns NR:ns ## COG: araD COG0235 # Protein_GI_number: 16128055 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 231 1 231 231 466 98.0 1e-131 MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRGRGVLVIKPSGVDYSTMTADDMVVVS IETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHAD YFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNA EDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ >gi|296918658|gb|GG773042.1| GENE 144 160860 - 163211 1940 783 aa, chain + ## HITS:1 COG:polB KEGG:ns NR:ns ## COG: polB COG0417 # Protein_GI_number: 16128054 # Func_class: L Replication, recombination and repair # Function: DNA polymerase elongation subunit (family B) # Organism: Escherichia coli K12 # 1 783 1 783 783 1610 98.0 0 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADHVPRAQHILQGE QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI TSPVWVEGDMRNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM LGPENGDASALDFELEYVASRPLLLEKLNAWFATHDPDVIIGWNVVQFDLRMLQKHAERY RIPLRLGRDNSELEWREHGFKNDVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKTLIEAQGYD VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE PYQEYVRETIDKLMAGELDTRLVYRKRLRRPLSEYQRNVPPHVRAARLADEENHKRGRPL QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL GLF >gi|296918658|gb|GG773042.1| GENE 145 163375 - 166281 3661 968 aa, chain + ## HITS:1 COG:ECs0063 KEGG:ns NR:ns ## COG: ECs0063 COG0553 # Protein_GI_number: 15829317 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Escherichia coli O157:H7 # 1 968 1 968 968 1915 100.0 0 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL RLIVVTHQ >gi|296918658|gb|GG773042.1| GENE 146 166260 - 166952 218 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 1 229 58 281 285 88 29 3e-16 DRCDASVTEPKMGMENYNPPQDPWLVVLYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTR IQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEG LVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHML ALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF >gi|296918658|gb|GG773042.1| GENE 147 167102 - 168010 800 302 aa, chain - ## HITS:1 COG:STM0094 KEGG:ns NR:ns ## COG: STM0094 COG1076 # Protein_GI_number: 16763484 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Salmonella typhimurium LT2 # 32 302 1 270 270 509 95.0 1e-144 MSHNRPQPEMGKSAFILWEIALISVCRFGEYMQYWGKIIGVAVALIMGGGFWGVVLGLLI GHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNL HGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPN ERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNV LGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKG FK >gi|296918658|gb|GG773042.1| GENE 148 168172 - 170526 2246 784 aa, chain + ## HITS:1 COG:imp KEGG:ns NR:ns ## COG: imp COG1452 # Protein_GI_number: 16128048 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Escherichia coli K12 # 1 784 1 784 784 1545 99.0 0 MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAK GDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILK GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTW SVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYKD EHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFS VGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNT RDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLAESANR VMPQFKVDGRMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSKIYNYDSSLLQSDYSGL FRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWEND DKTGSLVWAGDTYWRISDRWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYAS PEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQ YSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPY QNTL >gi|296918658|gb|GG773042.1| GENE 149 170579 - 171865 1404 428 aa, chain + ## HITS:1 COG:ECs0058 KEGG:ns NR:ns ## COG: ECs0058 COG0760 # Protein_GI_number: 15829312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 773 100.0 0 MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQL PDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAY DGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHIL IPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELP GIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTD EQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRL NKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRAS AYVKILSN >gi|296918658|gb|GG773042.1| GENE 150 171865 - 172854 464 329 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 7 324 9 326 346 183 35 8e-45 MVKTQRVVITPGEPAGIGPDLIVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRPYS PNSPAQPQTAGTLTLLPVALRESVTVGQLAVENGHYVVETLARACDGCLNGEFAALITGP VHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPAL LHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELREQGMKL NGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTA LELAGRGKADVGSFITALNLAIKMIVNTQ >gi|296918658|gb|GG773042.1| GENE 151 172851 - 173672 787 273 aa, chain + ## HITS:1 COG:ksgA KEGG:ns NR:ns ## COG: ksgA COG0030 # Protein_GI_number: 16128045 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Escherichia coli K12 # 1 273 1 273 273 535 99.0 1e-152 MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLD QLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAAKMGQPLRVFGNLPYNIST PLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSA FTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTG MGIDPAMRAENISVAQYCQMANYLAENAPLQES >gi|296918658|gb|GG773042.1| GENE 152 173675 - 174052 315 125 aa, chain + ## HITS:1 COG:ECs0055 KEGG:ns NR:ns ## COG: ECs0055 COG2967 # Protein_GI_number: 15829309 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein affecting Mg2+/Co2+ transport # Organism: Escherichia coli O157:H7 # 1 125 1 125 125 241 100.0 2e-64 MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRET EVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAV PTLIH >gi|296918658|gb|GG773042.1| GENE 153 174059 - 174907 910 282 aa, chain + ## HITS:1 COG:ECs0054 KEGG:ns NR:ns ## COG: ECs0054 COG0639 # Protein_GI_number: 15829308 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Escherichia coli O157:H7 # 1 282 1 282 282 586 98.0 1e-167 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVR LVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDKEKKLVMAH AGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAF TRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYNIAFGHWASLEGKGTPEGI YALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLSEGEAVAS >gi|296918658|gb|GG773042.1| GENE 154 175222 - 175455 230 77 aa, chain - ## HITS:1 COG:ECs0052 KEGG:ns NR:ns ## COG: ECs0052 COG5302 # Protein_GI_number: 15829306 # Func_class: R General function prediction only # Function: Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid # Organism: Escherichia coli O157:H7 # 1 77 1 77 77 115 100.0 3e-26 MTAKRTTQSVTVTVDRELVNRARDAGLNMSATLTVALNAELKKHAATRWREENAEAIAAL NQLADETGCFSDEYRSF >gi|296918658|gb|GG773042.1| GENE 155 175541 - 176020 675 159 aa, chain - ## HITS:1 COG:folA KEGG:ns NR:ns ## COG: folA COG0262 # Protein_GI_number: 16128042 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Escherichia coli K12 # 1 159 1 159 159 332 100.0 1e-91 MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNI ILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVE GDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR >gi|296918658|gb|GG773042.1| GENE 156 176212 - 178074 1031 620 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 6 586 9 612 618 401 38 1e-110 MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAE IGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVAELIGM TLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLAASSASTTMGA FVLSALKVAGALALVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLS MAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLIENPLRIVILL LGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSL TLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLS SGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQL TEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEA RERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQG TEEGKHTGNMADEPETKPSS >gi|296918658|gb|GG773042.1| GENE 157 178067 - 178540 467 157 aa, chain - ## HITS:1 COG:yabF KEGG:ns NR:ns ## COG: yabF COG2249 # Protein_GI_number: 16128040 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 1 157 20 176 176 313 100.0 1e-85 MLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWID KVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNW LPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG >gi|296918658|gb|GG773042.1| GENE 158 178705 - 180036 1429 443 aa, chain - ## HITS:1 COG:yaaU KEGG:ns NR:ns ## COG: yaaU COG0477 # Protein_GI_number: 16128039 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 443 1 443 443 832 99.0 0 MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGA GTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVI GADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAA IPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFEEEQPQQTRFRDLFNRR HFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPM LWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPN ELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAF APETRGMSLAQTSNMTIRGQRMG >gi|296918658|gb|GG773042.1| GENE 159 180095 - 180382 343 95 aa, chain - ## HITS:1 COG:ECs0047 KEGG:ns NR:ns ## COG: ECs0047 COG2440 # Protein_GI_number: 15829301 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Escherichia coli O157:H7 # 1 95 1 95 95 200 100.0 4e-52 MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDY AGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG >gi|296918658|gb|GG773042.1| GENE 160 180379 - 181665 1357 428 aa, chain - ## HITS:1 COG:fixC KEGG:ns NR:ns ## COG: fixC COG0644 # Protein_GI_number: 16128037 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli K12 # 1 428 1 428 428 815 100.0 0 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIP GFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEE AGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTD VAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCG LHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIA GDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDM RMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKD GMKGVTVL >gi|296918658|gb|GG773042.1| GENE 161 181716 - 182657 908 313 aa, chain - ## HITS:1 COG:fixB KEGG:ns NR:ns ## COG: fixB COG2025 # Protein_GI_number: 16128036 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli K12 # 1 313 1 313 313 592 98.0 1e-169 MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGTQAIQLGANHVWKLSGKPD ERMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLNAAVSNDASAVSVQDGK ATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRT ATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEH ERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDA VKILPALTVALAR >gi|296918658|gb|GG773042.1| GENE 162 182672 - 183478 801 268 aa, chain - ## HITS:1 COG:ECs0044 KEGG:ns NR:ns ## COG: ECs0044 COG2086 # Protein_GI_number: 15829298 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli O157:H7 # 1 268 1 268 268 448 99.0 1e-126 MNDVSFMISGDAMKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQL KQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAA QKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETE TLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPK QRERQRIVIEGDGEEQIAAFAENLRKVI >gi|296918658|gb|GG773042.1| GENE 163 183915 - 185429 1725 504 aa, chain + ## HITS:1 COG:caiT KEGG:ns NR:ns ## COG: caiT COG1292 # Protein_GI_number: 16128034 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli K12 # 1 504 1 504 504 935 100.0 0 MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMV VMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPP FGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVG EKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWI ILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRM LFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTW ILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATV TLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGG CPLFFVNIMVTLSFIKDAKQNWKD >gi|296918658|gb|GG773042.1| GENE 164 185460 - 186602 1414 380 aa, chain + ## HITS:1 COG:ECs0042 KEGG:ns NR:ns ## COG: ECs0042 COG1960 # Protein_GI_number: 15829296 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 1 380 1 380 380 788 100.0 0 MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEH GGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMW NSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVY TEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHE RFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEA AWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVS GGSDEMQILTLGRAVLKQYR >gi|296918658|gb|GG773042.1| GENE 165 186730 - 187947 1368 405 aa, chain + ## HITS:1 COG:caiB KEGG:ns NR:ns ## COG: caiB COG1804 # Protein_GI_number: 16128032 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 1 405 1 405 405 830 99.0 0 MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQ LSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVI AHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAA LAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMTKGKDPYYAGCGLYK CADGYIVMELVGITQIAECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWL AAHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKF KNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED >gi|296918658|gb|GG773042.1| GENE 166 188020 - 189573 1030 517 aa, chain + ## HITS:1 COG:ECs0040 KEGG:ns NR:ns ## COG: ECs0040 COG0318 # Protein_GI_number: 15829294 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 1 517 6 522 522 1079 98.0 0 MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIR KGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESTWILQNSQACLLVTSAQFY PMYQQIQQEDASQLRHICLIDMALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILF TSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAG ATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLS EQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRP LPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRR CNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEF FCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK >gi|296918658|gb|GG773042.1| GENE 167 189574 - 190467 984 297 aa, chain + ## HITS:1 COG:caiD KEGG:ns NR:ns ## COG: caiD COG1024 # Protein_GI_number: 16128030 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 1 297 1 297 297 577 98.0 1e-165 MKRQGTTLSANNHALKQYAFFAGMLSSLKKQKWRKGMSESLHLTRNGSILEITLDRPKAN AIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSADWDLKAAAEGEAPDADFGPGGF AGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVL RLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAI AALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR >gi|296918658|gb|GG773042.1| GENE 168 190473 - 191063 440 196 aa, chain + ## HITS:1 COG:caiE KEGG:ns NR:ns ## COG: caiE COG0663 # Protein_GI_number: 16128029 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli K12 # 1 196 8 203 203 389 97.0 1e-108 MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQD GCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSF VKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAALHETQPLRQME ENRPRLQGTTDVTPKR >gi|296918658|gb|GG773042.1| GENE 169 191182 - 191577 329 131 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1947 NR:ns ## KEGG: APECO1_1947 # Name: caiF # Def: DNA-binding transcriptional activator CaiF # Organism: E.coli_APEC # Pathway: not_defined # 1 131 36 166 166 250 100.0 1e-65 MCEGCVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQK WQMMLSKSMRR >gi|296918658|gb|GG773042.1| GENE 170 191867 - 192112 184 81 aa, chain - ## HITS:1 COG:YPO2928 KEGG:ns NR:ns ## COG: YPO2928 COG1943 # Protein_GI_number: 16123115 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 81 72 152 152 162 96.0 1e-40 MSVSGFMGYLKGKSSLMPYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLE EDKMGEQLSIPYPGSPFTGRK >gi|296918658|gb|GG773042.1| GENE 171 192840 - 194147 927 435 aa, chain - ## HITS:1 COG:HI1462 KEGG:ns NR:ns ## COG: HI1462 COG1538 # Protein_GI_number: 16273365 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Haemophilus influenzae # 31 430 51 451 454 166 26.0 1e-40 MLKSDYRAPEVNYPINWTKGDVDGNTSPFDWEEFNDPNLDNWLHLVMTSNNDIAIAALRI HRAQLDAERTGITNTPALKAALSMDGKKQLNNSSGWAKSGSASLGTSYELDLWGKIARQR DVAEWAVHASEEDFRSARLMLLSEASNNYWRIGFVNQQITTLQQSIDYAKETLRLAEVRY RAGNISSLDVIDAQQNLLTQENQLTGLQREHSQLLNQQAVLLGTVPGCQIVEPTTLPKGS LPKVNANIPASILMRRPDISAKEWQLREALATVDIKRSEYYPTFNLTGALGTSSASLLAL LHNPVGSVGANLTLPFLEWRQRDIEVKIARNDYEQRVLEFKQLLYKAMSSIEDALSFRNQ LLLQETRLREELELARKSEWLNEVRYRHGAVRISFWLDAQEKRRQAELRLDENRFNQLQN LAKIYLEFGGASTFP >gi|296918658|gb|GG773042.1| GENE 172 194214 - 195995 277 593 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 201 593 6 413 413 111 25 4e-23 MGCLDVPNRGDYYIDGQNAACLSPDELARVRREHIGFIFQRYHLIPDLSALGNVEIPAIY ANSERDSRRQRATALLGRLGLEGREHHKPCELSGGQQQRVSIARALINGGKIILADEPTG ALDSQSGQEVLAILNELNRRGHTVVMVTHDMKVARHAKRIIELCDGEIIADSGGCVSATE TLPKTNRIRQSYWKTLLDRTRESMQMALKAMKTHRLRTTLTMIGIVFGIASVVTVVALGE GARQETLEEIKSLGTNVVSIYPGQDLFDDSIESIRTLVPADANALAKQGFIDSVSPEVSA SDNIRFLGKSAIASINGVGREHFRVKGIELLQGTTFRDDRNALQEVIIDENTRKAIFDNT GLQALGQIVFLGSVPARVVGIAKSNNRSDASNRITVWMPYSTVMYRIVGKPVLTGISVRL KDNVDNEAAISAISQLLTRRHGIKDFQLYNFEQIRKSIEHTSMTFSILILMVACISLMIG SIGVMNIMLISVTERTHEIGVRMAVGARRSDIMQQFIIEAVLVCLIGGALGIALSYITGA LFNALADGIFAAIYSWQAAVAAFFCSTLIGIIFGYLPARKAARMDPVISLASE >gi|296918658|gb|GG773042.1| GENE 173 196182 - 197333 516 383 aa, chain - ## HITS:1 COG:YPO2999 KEGG:ns NR:ns ## COG: YPO2999 COG0845 # Protein_GI_number: 16123180 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 26 337 29 339 401 255 46.0 1e-67 MKYISHRAIICTLTLLIIIITVLFTFLRSSDVPEYITAPVRKGDIENSVLATGRIDAIER VNVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNAEAALNEVKAELQSKQAL LKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELHSLNAKLVQAQIEVDKKKLAL EYTRVVAPMDGIVIAIVTQQGQTVNSNQSAPTIIKLARLDVMTIKAQISEADITRISVGQ KARFSIFSEPDKHYSATLRAVELAPESVMKDDSLASNTSASGSGTSNASVYYNALFDVPN PENRLRIAMTAQVTLITDEAQNTLLVPIQAVHRNEGEEATGPGAGSRWQAGTPECENWYH EQRGYSDPRRFKCRRKCRAVAAG >gi|296918658|gb|GG773042.1| GENE 174 199144 - 199329 76 61 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0060 NR:ns ## KEGG: EcSMS35_A0060 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 58 1 58 76 96 100.0 4e-19 MTVSIVSPSAAAVKPRRHPRFRREDIPAPEIDPVLKAFGRHIARSFHRGRGVHIPAMKLA S >gi|296918658|gb|GG773042.1| GENE 175 199400 - 200761 1033 453 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0047 NR:ns ## KEGG: pECS88_0047 # Name: ydbA # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 453 1 453 453 847 100.0 0 MTLAAITMTAPEAASPVQMYRATYSPDDNKLRLYAASRLDPETYKKVHDAGFRWAPKQAL FVAPAWTPGREDVLLSLAGEIEDEDSTLAERQEARAERFTGYSGKRASESAQALDEVERL AAMIPPGQPILVGHHSERRARRDAQRIENGMKRAVMLVERAEYWEERARSALLHAKYKER PDVRWRRIKKIEADLRKAEKTIAQSQKYLTIWRAESLDLNMAKLISSHDRISACFPLDTY PRPAEKSQYEGSRSLWSALDDDIITTEQAREIAIRCHKRQIQHQQRWVNHYQNRLIYERA MLDESGGVVTRTQDFEPGGQVFSRGEWLTIIRVNKSNGTVSSVTTPNYSFLGYSGTMKVT PDRITDYKAPSAEEAAVASQAAKRPPVVNYPGEGFREMTKAQWAALPRDCKAVRSVAEAE DHGAYRYRRTMDNNFRLVNVYITDMKITEIPQK >gi|296918658|gb|GG773042.1| GENE 176 200809 - 201372 321 187 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0048 NR:ns ## KEGG: pECS88_0048 # Name: ydcA # Def: putative adenine-specific DNA methylase # Organism: E.coli_S88 # Pathway: not_defined # 1 187 1 187 187 368 100.0 1e-101 MYSQLRERIRLMRARLDNAAPVAEIRAESQLFVTPAPVCDRLVTLAGISNRDHILEPSAG TGAILRAIRDTAPVAMCDAVEINSGLVRYLRENFNGVRVQCGDFMEWQPVQYYSRVIMNP PFSHGQDIRHILRAFSLLRPGGVLVAVCLNGPRQQEKLLPFSDVREELPRGTFAYTDVPT MIIRLRA >gi|296918658|gb|GG773042.1| GENE 177 201458 - 201979 -155 173 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_E0029 NR:ns ## KEGG: EcE24377A_E0029 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 35 155 79 202 249 113 60.0 4e-24 MEARQGGDRGGGPWTVSAAGCGCLSPRRQGLIRVCGTWQAMSRNPPQRREARFAKRRCSL HSGAFCRDAGSAGHGATEAARPERSLQARGFASGMEARQGGDSSAGSVHDSPPRQGDARK RHRQKKNKTDSNQSSRKKKNSSSSRNIISNRQMTDLKRQKPTAEFPRNERGGA >gi|296918658|gb|GG773042.1| GENE 178 202460 - 202747 331 95 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0060 NR:ns ## KEGG: pECS88_0060 # Name: yubO # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 95 1 95 95 182 100.0 3e-45 MSTRNIHVNIASYTLLVAGKKKYTGEEWDVLEFSSLTELKKYRKSHPEKMAFSYSYALSR GVDTQFRHINIAEADHFKQFLRQIKRTGLDIRAIC >gi|296918658|gb|GG773042.1| GENE 179 202866 - 203687 483 273 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0061 NR:ns ## KEGG: pECS88_0061 # Name: yubP # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 273 28 300 300 555 100.0 1e-157 MRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSERYTYIPTINIINKLRDEG FQPFFACQSRVRDLGRREYSKHMLRLRREGHINGQEVPEIILLNSHDGSSSYQMIPGIFR FVCTNGLVCGNNFGEIRVPHKGDIVGQVIEGAYEVLGVFDKVTDNMEAMKEIHLNSDEQH LFGRAALMVRYEDENKTPVTPEQIITPRRREDKQNDLWTTWQRVQENMIKGGLSGRSASG KNTRTRAITGIDGDIRINKALWMIAEQFREWKS >gi|296918658|gb|GG773042.1| GENE 180 203983 - 204492 215 169 aa, chain - ## HITS:1 COG:PSLT072 KEGG:ns NR:ns ## COG: PSLT072 COG0741 # Protein_GI_number: 17233503 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Salmonella typhimurium LT2 # 1 154 1 154 156 234 72.0 5e-62 MKKWMLAICLMFINEICLATDCFDLAGRDYKIDPDLLRAISWQESRYRVNAIGINPVTGY GSGLMQVDSQHFNELARYGIKPEHMTTDPCMNIYTGAYYLAIAFKKWGVTWEAVGAYNAG FRKTERQNQRRLAYASDVYRIYTGIKSSKGIRVPTTKKSLSQMNSVQNN >gi|296918658|gb|GG773042.1| GENE 181 204957 - 205340 255 127 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0063 NR:ns ## KEGG: pECS88_0063 # Name: traM # Def: conjugal transfer protein TRAM # Organism: E.coli_S88 # Pathway: not_defined # 1 127 1 127 127 216 100.0 3e-55 MAKVNLYISNDAYEKINAIIEKRRQEGAREKDVSFSATASMLLELGLRVHEAQMERKESA FNQTEFNKLLLECVVKTQSSVAKILGIESLSPHVSGNPKFEYANMVEDIREKVSSEMERF FPKNDDE >gi|296918658|gb|GG773042.1| GENE 182 205536 - 206225 244 229 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0064 NR:ns ## KEGG: pECS88_0064 # Name: traJ # Def: conjugal transfer transcriptional regulator TraJ # Organism: E.coli_S88 # Pathway: not_defined # 1 229 28 256 256 426 100.0 1e-118 MYPMDRIQQKHARQIDLLENLTAVIQDYPNPACIRDETGKFIFCNTLFHESFLTQDQSAE KWLLSQRDFCELISVTEMEAYRNEHTHLNLVEDVFIQNRFWTISVQSFLNGHRNIILWQF YDAAHVRHKDSYNQKTIVSDDIRNIIRRMSDDSSVSSYVNDVFYLYSTGISHNAIARILN ISISTSKKHASLICDYFSVSNKDELIILLYNKKFIYYLYEKAMCIINTR >gi|296918658|gb|GG773042.1| GENE 183 206324 - 206719 155 131 aa, chain + ## HITS:1 COG:no KEGG:ECO111_p3-60 NR:ns ## KEGG: ECO111_p3-60 # Name: not_defined # Def: conjugal transfer protein TraY # Organism: E.coli_O111_H- # Pathway: not_defined # 1 131 1 131 131 252 100.0 3e-66 MKRFGTRSATGKMVKLKLPVDVESLLIEASNRSGRSRSFEAVIRLKDHLHRYPKFNRAGN IYGKSLVKYLTMRLDDETNQLLIAAKNRSGWCKTDEAADRVIDHLIKFPDFYNSEIFREA DKEEDITFNTL >gi|296918658|gb|GG773042.1| GENE 184 206752 - 207117 364 121 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0066 NR:ns ## KEGG: pECS88_0066 # Name: traA # Def: conjugal transfer pilin subunit TraA # Organism: E.coli_S88 # Pathway: not_defined # 1 121 1 121 121 171 100.0 9e-42 MNAVLSVQGASAPVKKKSFFSKFTRLNMLRLARAVIPAAVLMMFFPQLAMAAGSSGQDLM ASGNTTVKATFGKDSSVVKWVVLAEVLVGAVMYMMTKNVKFLAGFAIISVFIAVGMAVVG L >gi|296918658|gb|GG773042.1| GENE 185 207132 - 207443 380 103 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0038 NR:ns ## KEGG: EcSMS35_A0038 # Name: traL # Def: conjugal transfer pilus assembly protein TraL # Organism: E.coli_SECEC # Pathway: not_defined # 1 103 1 103 103 207 100.0 1e-52 MSGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAICIGWGITTSKYLFGIGAAVLVYFG IKKLKKGRGSSWLRDLIYWYMPTALLRGIFHNVPDSCFRQWIK >gi|296918658|gb|GG773042.1| GENE 186 207465 - 208031 538 188 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0068 NR:ns ## KEGG: pECS88_0068 # Name: traE # Def: conjugal transfer pilus assembly protein TraE # Organism: E.coli_S88 # Pathway: not_defined # 1 188 1 188 188 363 100.0 1e-99 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGMNNYRLQNEQRTAVTPMAFNAPFAV SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF GETDDEKK >gi|296918658|gb|GG773042.1| GENE 187 208018 - 208746 575 242 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0108 NR:ns ## KEGG: p1ECUMN_0108 # Name: traK # Def: conjugal transfer protein TraK # Organism: E.coli_UMN026 # Pathway: not_defined # 1 242 1 242 242 451 100.0 1e-125 MRKNNTAIIFGSLFFSCSVMAANGTLAPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGARMDVYVIRDGE GN >gi|296918658|gb|GG773042.1| GENE 188 208746 - 210173 1272 475 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0035 NR:ns ## KEGG: EcSMS35_A0035 # Name: traB # Def: conjugal transfer pilus assembly protein TraB # Organism: E.coli_SECEC # Pathway: not_defined # 1 475 1 475 475 841 100.0 0 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK >gi|296918658|gb|GG773042.1| GENE 189 210163 - 210753 136 196 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0071 NR:ns ## KEGG: pECS88_0071 # Name: traP # Def: conjugal transfer protein TraP # Organism: E.coli_S88 # Pathway: not_defined # 1 196 1 196 196 387 100.0 1e-106 MANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLV KEINFVRQTAPAGQFPVSECWFSSSDSSGRSEIQGICHYRAADAADYVRETDRSLMQLVT ALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLKEVYTEDASLPGKIRKCPVYL PDDRTNRNNGDKNEHA >gi|296918658|gb|GG773042.1| GENE 190 210740 - 210937 133 65 aa, chain + ## HITS:1 COG:no KEGG:E2348_P1_067 NR:ns ## KEGG: E2348_P1_067 # Name: trbD # Def: conjugal transfer protein TrbD # Organism: E.coli_0127 # Pathway: not_defined # 1 61 1 61 106 116 98.0 3e-25 MNMRNINVITALSVPGKTVSDDFMHAVLSNCATRIVLPAPEKFGSESLPDNFNMTAVGVM KNSEI >gi|296918658|gb|GG773042.1| GENE 191 210949 - 211200 196 83 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0073 NR:ns ## KEGG: pECS88_0073 # Name: trbG # Def: conjugal transfer protein TrbG # Organism: E.coli_S88 # Pathway: not_defined # 1 83 1 83 83 157 100.0 1e-37 MNKLVSDGSVKKINYPVLYESGITPPLCEVSAPEPDAGGKRIVAYVYKSSRSTVFENPDI VKTCTVRDLKKDFVNCDEKGEGQ >gi|296918658|gb|GG773042.1| GENE 192 211197 - 211712 307 171 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0074 NR:ns ## KEGG: pECS88_0074 # Name: traV # Def: conjugal transfer protein TraV # Organism: E.coli_S88 # Pathway: not_defined # 1 171 1 171 171 273 100.0 2e-72 MKQISFFIPLLGTLLLSGCAGTSTEFECNATTSDTCMTMEQANEKAKKLERSSEAKPVAA SLPRLAEGNFRTMPVQTVTATTPSGSRPAVTAHPEQKLLAPRPLFTAAREVKTVVPVSSV TPVTPPRPLRTGEQTAALWIAPYIDNQDVYHQPSSVFFVIKPSAWGKPRIN >gi|296918658|gb|GG773042.1| GENE 193 211847 - 212068 127 73 aa, chain + ## HITS:1 COG:PSLT085 KEGG:ns NR:ns ## COG: PSLT085 COG1734 # Protein_GI_number: 17233451 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Salmonella typhimurium LT2 # 1 73 1 73 73 125 84.0 1e-29 MSDEADEAYSVTEQLTMTGINRIRQKINAHGIPVYLCEACGNPIPEARRKIFPGVTLCVE CQAYQERQRKHYA >gi|296918658|gb|GG773042.1| GENE 194 212061 - 212165 65 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHKSVAEHSDLIPDEHEWIFRKQKSLYMRREMAR >gi|296918658|gb|GG773042.1| GENE 195 212228 - 214855 2622 875 aa, chain + ## HITS:1 COG:PSLT088_2 KEGG:ns NR:ns ## COG: PSLT088_2 COG3451 # Protein_GI_number: 17233453 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Salmonella typhimurium LT2 # 290 872 1 583 593 1141 94.0 0 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT TMGFMLEAIPINGANESIVEALDHMLRTKLPRGIPLCIHLMSSQLVGDRIEYGLREFSWS GEQAERFNAITRAYYMKAAATQFPLPEGMNLPLTLRHYRVFISYCSPSKKKSRADILEME NLVKIIRASLQGASITTQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED SFDLKVRADYLTLGLRESGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL KNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYRTA RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFLPL QRDMIGKFGAAKDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA >gi|296918658|gb|GG773042.1| GENE 196 214852 - 215238 310 128 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM40 NR:ns ## KEGG: APECO1_O1CoBM40 # Name: trbI # Def: conjugal transfer protein TrbI # Organism: E.coli_APEC # Pathway: not_defined # 1 128 1 128 128 208 92.0 4e-53 MTTTQKTTDVTAPRRSHWWWTVPGCLAMVLLNAAISYGIVRLNAPVTAAFNMKQTVDAFF DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDITREIQQDI ARRMRAEP >gi|296918658|gb|GG773042.1| GENE 197 215235 - 215867 549 210 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0079 NR:ns ## KEGG: pECS88_0079 # Name: traW # Def: conjugal transfer pilus assembly protein TraW # Organism: E.coli_S88 # Pathway: not_defined # 1 210 1 210 210 416 100.0 1e-115 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL GIDQVPARVSAVPGDRFLKVEFIPAEEGRK >gi|296918658|gb|GG773042.1| GENE 198 215864 - 216856 776 330 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM42 NR:ns ## KEGG: APECO1_O1CoBM42 # Name: traU # Def: conjugal transfer pilus assembly protein TraU # Organism: E.coli_APEC # Pathway: not_defined # 1 330 1 330 330 655 98.0 0 MKRSLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFPLSLGSIKVSQGKVPDT ANPSMPIQICPAPPPLFRRIGLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGTA KKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLDIAYLSEIDPTWTDSSLTTIL NPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGSQGSMYPFNGWVSNESSPLQSSL LVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKERWRYQMVNMYPDSGQCHPFGRS VTRWETGKNPPNTKKNFGYLMWRKRNCVFL >gi|296918658|gb|GG773042.1| GENE 199 216865 - 217503 416 212 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0081 NR:ns ## KEGG: pECS88_0081 # Name: trbC # Def: conjugal transfer pilus assembly protein TrbC # Organism: E.coli_S88 # Pathway: not_defined # 1 212 2 213 213 410 99.0 1e-113 MKLSMKSLAALLMMLNGAVMASENVNTPENRQFLKQQENLSRQLREKPDHQLKAWAEKQV LENPLQRSDNHFLNELVRKQQASQDGKPRQGALYFVSFSIPEEGLKRMLGETRHYGIPAT LRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGIRSVPALVVFCSQGYDIIRGN LRVGQALEKVAATGDCRQVAHDLLAGKGVSGK >gi|296918658|gb|GG773042.1| GENE 200 217500 - 219308 1151 602 aa, chain + ## HITS:1 COG:no KEGG:E2348_P1_058 NR:ns ## KEGG: E2348_P1_058 # Name: traN # Def: conjugal transfer mating pair stabilization protein TraN # Organism: E.coli_0127 # Pathway: not_defined # 1 602 1 602 602 1164 98.0 0 MKRILPLILALVAGMAQADSNSDYRAGSDFAHQIKGQGSSSIQGFKPQESIPGYNANPDE TKYYGGVTAGGDGGLKNDGTTEWATGETGKTITESFMNKPKDILSPDAPFIQTGRDVVNR ADSIVGNTGQQCSAQEISRSEYTNYTCERDLQVEQYCTRTARMELQGSTTWETRTLEYEM SQLPAREVNGQYVVSITSPVTGEIINAHYSWSRTYLQKSVPMTITVLGTPLSWNAKYSAD ASFTPVQKTLTAGVAFTSSHPVRVGNTKFKRHTAMKLRLVVRVKKASYTPYVVWSESCPF SKELGKLTKTECTEAGGNRTLVKDGQSYSMYQSCWAYRDTYVTQSADKGTCQTYADNPAC TLVSHQCTFYSEEGACLHEYATYSCESKTSGKVMVCGGDVFCLDGECDKAQSGKSNDFAE AVSQLAALAAAGKDVAALNGVDVRAFTGQAKFCKKAAAGYSNCCKDSGWGQDIGLAKCSS DEKALAKAKSNKLTVSVGEFCSKKVLGVCLEKKRSYCQFDSKLAQIVQQQGRNGQLRISF GSAKHPDCRGITVDELQKIQFDRLDFTNFYEDLMNNQKIPDSGVLTQKVKEQIADQLKQA GQ >gi|296918658|gb|GG773042.1| GENE 201 219335 - 219592 91 85 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0083 NR:ns ## KEGG: pECS88_0083 # Name: trbE # Def: conjugal transfer protein TrbE # Organism: E.coli_S88 # Pathway: not_defined # 1 85 2 86 86 151 100.0 9e-36 MKVIFTSNRFIDFLIRLLITAIVISPVIIWSWDTVKETTAGEILAAAFVIFYSGVLLFIL YFCFSALTDLQKPDERKSDERNEDE >gi|296918658|gb|GG773042.1| GENE 202 219585 - 220328 670 247 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0084 NR:ns ## KEGG: pECS88_0084 # Name: traF # Def: conjugal pilus assembly protein TraF # Organism: E.coli_S88 # Pathway: not_defined # 1 247 11 257 257 494 100.0 1e-138 MNKALLPLLLCCFIFPASGKDAGWQWYNEKINPKEKENKPVPAASRQEPDIMQKLAALQT ATKRALYEAILYPGVDNFVKYFRLQNYWTQQAGLFTMSAKKAMLAHPELDYNLQYSHYNG TVRNQLAADQVQQRQAIAKLAEHYGIMFFYRGQDPIDGQLAQVINGFRDTYGLSVIPVSV DGVINPLLPDSRTDQGQAQRLGVKYFPAMMLVDPKQGSVRPLSYGFISQDYLAKQFLNVS EDFKPNF >gi|296918658|gb|GG773042.1| GENE 203 220344 - 220691 63 115 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0019 NR:ns ## KEGG: EcSMS35_A0019 # Name: trbA # Def: conjugal transfer protein TrbA # Organism: E.coli_SECEC # Pathway: not_defined # 1 115 1 115 115 177 97.0 1e-43 MSEDCLKMFTGVVLLIFVIIAGYFFSERNDRKMFLLSSLVFLVINIACLYVLTASLWFLC GAIMNQGAAMVVPMVICSLPNVTSFDGFRRIFICIMLSSVWSGVMWFFIRGLMTG >gi|296918658|gb|GG773042.1| GENE 204 220810 - 221094 327 94 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0018 NR:ns ## KEGG: EcSMS35_A0018 # Name: traQ # Def: conjugal transfer pilin chaperone TraQ # Organism: E.coli_SECEC # Pathway: not_defined # 1 94 1 94 94 166 100.0 4e-40 MISKRRFSLPRLDITGMWVFSLGVWFHIVARLVYSKPWMAFFLAELIAAILVLFGAYQVL DAWIARVSREEREALEARQQAMMEGQQEGRHVSH >gi|296918658|gb|GG773042.1| GENE 205 221081 - 221626 510 181 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0087 NR:ns ## KEGG: p1ECUMN_0087 # Name: trbB # Def: conjugal transfer protein TrbB # Organism: E.coli_UMN026 # Pathway: not_defined # 1 181 1 181 181 318 92.0 5e-86 MSLIKSLLFTLLLAAAAVQASTRDEIERLWNPQGMAAQPAQPAAGTSARTEKPAPRWFRL SNGRQVNLADWKVVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQGDTAFPEALP VPPDVMQTFFPNIPVATPTTFLVNVNTLEALPLLQGATDAAGFMARMDTVLQMYGGKKGA K >gi|296918658|gb|GG773042.1| GENE 206 221616 - 221918 122 100 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0016 NR:ns ## KEGG: EcSMS35_A0016 # Name: trbJ # Def: conjugal transfer protein TrbJ # Organism: E.coli_SECEC # Pathway: not_defined # 1 100 21 120 120 181 97.0 8e-45 MRNKQVVLLIAGISGIATGIIVSLNIPFIHQGLFYPASPVEIVVSLCLTFSVSVVFFVVA IVGWISVSEIYYSRRTGRKYRDIPAEMSYAPGEHIKGGQE >gi|296918658|gb|GG773042.1| GENE 207 221915 - 223291 1291 458 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0015 NR:ns ## KEGG: EcSMS35_A0015 # Name: traH # Def: conjugal transfer pilus assembly protein TraH # Organism: E.coli_SECEC # Pathway: not_defined # 1 458 1 458 458 895 100.0 0 MMPRIKPLLVLCAALLTVTPAASADVNSDMNQFFNKLGFASNTTQPGVWQGQAAGYAYGG SLYARTQVKNVQLISMTLPDINAGCGGIDAYLGSFSFINGEQLQRFVKQIMSNAAGYFFD LALQTTVPEIKTAKDFLQKMASDINSMNLSSCQAAQGIIGGLFPRTQVSQQKVCQDIAGE SNIFADWAASRQGCTVGGKSDSVRDKASDKDKERVTKNINIMWNALSKNRMFDGNKELKE FVMTLTGSLVFGPNGEITPLSARTTDRSIIRAMMEGGTAKIYHCNDSDKCLKVVADTPVT ISRDNALKSQITKLLASIQNKAVSDTPLDDKEKGFISSTTIPVFKYLVDPQMLGVSNSMI YQLTDYIGYDILLQYIQELIQQARAMVATGNYDEAVIEHINDNMNDATRQIAAFQSQVQV QQDALLVVDRQMSYMRQQLSARMLSRYQNNYHFGGSTL >gi|296918658|gb|GG773042.1| GENE 208 223288 - 225861 1583 857 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM53 NR:ns ## KEGG: APECO1_O1CoBM53 # Name: traG # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 834 458 1291 1398 1524 95.0 0 MNEVYVIAGGEWLRNNLNAIAAFMGTRTWDSIEKIALTLSVLAVAVMWVQRHNVMDLLGW VAVFVLISLLVNVRTSVQIIDNSDLVKVHRVDNVPVGLAMPLSLTTRIGHAMVASYEMIF TQPDSVTYSKTGMLFGAELVSKSTDFLSRNPEIANLFQDYVQNCVMGDIYLNHKYTLEEL MASADPYTLIFSRPSPLRGVYDSNNNFVTCKDASVLLKDKLNLDTQSGGKTWHYYAQQLF GGRPDPNLLFSTLIGDSYSYFYGSSKSASQIIRQNVTINALKEGITSYAARNGDSASLVN LATTSSMEKQRLAHVSIGYVAMRTLPMTQTILTGIAIGIFPLLVLAAVFNKLTLSVLKGY VFALMWLQSWPMLYAILNSAMTFYAKQNGAPVVLSEISQIQLKYSDLASTAGYLSMMIPP LSWMMVRGLGAGFSSVYSHFASSAISPTASAAGSVVDGNYSYGNMQTENVNGFSWSTNST TSFGQMMYQTGSGATATQTRDGNMVMDASGAMSRLPVGINATRQIAAAQQEMAREASNRA ESALHGFSSSIASAWNSLSQFGSNRGSSDSVTGGADSTMSAQDSMMASRMRSAVESYAKA HNISNEQATRELASRSTRGSAGMYGDAHAEWGVKPKILGVGGGVGVRGGGRASIDWSDED AHQASSGSRASHDTRHDIDARATQDFKEASDYFTSRKVSESGSHTDNNADSRVDQLSAAL NSAKQSYDQYTTNMTRSHEYAEMASRTESMSGQMSEDLSQQFAQYVMKHAPQDAEAILTN TSSPEIAERRRAMAWSFVQEQVQPGVDNAWRESRGDIGKGMESVPSGGGAARILLLIIRG IRPLLSKERRTVISVMM >gi|296918658|gb|GG773042.1| GENE 209 225879 - 226112 90 77 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0014 NR:ns ## KEGG: EcSMS35_A0014 # Name: traG # Def: conjugal transfer mating pair stabilization protein TraG # Organism: E.coli_SECEC # Pathway: not_defined # 1 77 864 940 940 151 100.0 9e-36 MVTEYRGNIGDTQSSIRGEENIVGRQYSELQNHHKTEALSQNNKYNEEKSGQERMPGADS PQELMKRAKEYQDKHKQ >gi|296918658|gb|GG773042.1| GENE 210 226133 - 226630 220 165 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0091 NR:ns ## KEGG: pECS88_0091 # Name: traS # Def: surface exclusion inner membrane protein TraS # Organism: E.coli_S88 # Pathway: not_defined # 1 165 7 171 171 315 100.0 3e-85 MKNLAHIALVTVIQFIACYLADWGSAETVFILCFIVLWQGLFIWLFSQIRKKRHVSDEFK FSKGVWYILMPVSSLLSPLLSLMVFIIGTLYELRRISGCVSVREWMQSQVNEQTNEDLHL DFDDVNFDYVDFYRTNPATGLAMHGGFDSAGNTFGTCWQDYDDRR >gi|296918658|gb|GG773042.1| GENE 211 226662 - 227393 704 243 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0092 NR:ns ## KEGG: pECS88_0092 # Name: traT # Def: conjugal transfer surface exclusion protein TraT # Organism: E.coli_S88 # Pathway: not_defined # 1 243 34 276 276 396 100.0 1e-109 MKTKKLMTVALVSSTLALSGCGAMSTAIKKRNLEVKTQMSETIWLEPASERTVFLQIKNT SDKDMSGLQGKIADAVKAKGYQVVTSPDKAYYWIQANVLKADKMDLRESQGWLNRGYEGA AVGAALGAGITGYNSSSAGATLGVGLAAGLVGMAADAMVEDVNYTMITDVQIAERTKATV TTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEDQLAKSIA NIL >gi|296918658|gb|GG773042.1| GENE 212 227645 - 229807 2117 720 aa, chain + ## HITS:1 COG:PSLT104_1 KEGG:ns NR:ns ## COG: PSLT104_1 COG3505 # Protein_GI_number: 17233468 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Salmonella typhimurium LT2 # 1 610 1 610 616 1159 89.0 0 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWVKISWQTFVNGCIY WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLATVVAL VICLITFFVVSWILGRQGKQQSENEVTGGRQLTENPKDVARMLKKDGKDSDIRIGDLPII RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS YSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN GESFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRA FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSL PDLTCYVTLPGPYPAVKLSLKYQARPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMA SLFEPDVPEVVSGEDVTQAEQPQQPQQPVSPAINDKKSDSGVNVPAGGIEQELKMKPEEE MEQQLPPGISESGEVVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERGEDVEPGDDF >gi|296918658|gb|GG773042.1| GENE 213 229807 - 230169 303 120 aa, chain + ## HITS:1 COG:PSLT108 KEGG:ns NR:ns ## COG: PSLT108 COG0507 # Protein_GI_number: 17233470 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Salmonella typhimurium LT2 # 1 119 1 119 1752 202 84.0 1e-52 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVGAS >gi|296918658|gb|GG773042.1| GENE 214 230209 - 235104 3316 1631 aa, chain + ## HITS:1 COG:PSLT108 KEGG:ns NR:ns ## COG: PSLT108 COG0507 # Protein_GI_number: 17233470 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Salmonella typhimurium LT2 # 1 1631 126 1752 1752 2620 88.0 0 MTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGF IENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQAIREAV GEDASLKSRDVAALDTRKSKQHVDPEVRMAEWMQTLKETGFDIRAYRDAADQRAETRTQA PGAVSQEGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAI SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSV LAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNLKQDERLSGE LITGRRQLLEGMAFTPGNTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGS ALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR EQVILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP GLRVSGGDRLQVASVSEDAMTVVVPGRAEPASLPVADSPFTALKLESGWVETPGHSVSDS AKVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAG ETLLETAISLQKAGLHTPAQQAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTSFTDLG GEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVTPLMERVPGEL MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESGRPRVVGLGP THRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGKEQVMVPVLN TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSGGQQTRVIRP AQVRAEQHIDLAYAITAHGAQGASETFAIALEGTEGSRKLMAGFESAYVALSRMKQHVQV YTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAG LAGGDTPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKG SGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVW GDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDSKTE QAVREIAGQERDRSAISEREAALPESVLRESQREREAVREVARENLLQERLQQMEQDMVR DLQKEKTLGGD >gi|296918658|gb|GG773042.1| GENE 215 235124 - 235870 600 248 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0095 NR:ns ## KEGG: pECS88_0095 # Name: traX # Def: conjugal transfer pilus acetylation protein TraX # Organism: E.coli_S88 # Pathway: not_defined # 13 248 13 248 248 422 100.0 1e-117 MTTDNTNTTRNDSLAARTDTWLQSLLVWSPGQRDIIKTVALVLMVLDHANRILHLDQTWM FLAGRGAFPLFALVWGLNLSRHAHIRQSAINRLWGWGIIAQFAYYLAGFPWYEGNILFAF AVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAGLLMLAVSHRLYRAEDRTERL ALVACLLAVIPALNLATSDAAAVAGLVMTVLTVGLVSCAGKSLPRFWPGDFFPTFYACHL AVLGVLAL >gi|296918658|gb|GG773042.1| GENE 216 235925 - 236485 486 186 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0008 NR:ns ## KEGG: EcSMS35_A0008 # Name: finO # Def: conjugal transfer fertility inhibition protein FinO # Organism: E.coli_SECEC # Pathway: not_defined # 1 186 18 203 203 315 100.0 7e-85 MTEQKRPVLTLKRKTEGGTPVRSRKTIINVTTPPKWKVKKQKLAEKAAREAELAAKKAQA RQALSIYLNLPTLDEAVNTLKPWWPGLFDGDTPRLLACGIRDVLLEDVAQRNIPLSHKKL RRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEAYAAERLAKIRRQNRIKAELQ AVLNEK >gi|296918658|gb|GG773042.1| GENE 217 236623 - 236835 73 70 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0097 NR:ns ## KEGG: pECS88_0097 # Name: yigA # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 70 1 70 70 82 100.0 4e-15 MNGFRNSSRNGQVWRWQRAGSRAVILEVSGRWMEAAEAWRRAAGVAPRTDWQQFARKRAA HCHRRCRGRV >gi|296918658|gb|GG773042.1| GENE 218 237078 - 237479 203 133 aa, chain + ## HITS:1 COG:Cj0979c KEGG:ns NR:ns ## COG: Cj0979c COG1525 # Protein_GI_number: 15792306 # Func_class: L Replication, recombination and repair # Function: Micrococcal nuclease (thermonuclease) homologs # Organism: Campylobacter jejuni # 7 118 30 140 175 89 41.0 2e-18 MRKYIPLVLFIFSWPVLSAYIHGRVVRVLDGDTIEVMDSRKAVRIRLVNIDAPEKKQDYG RWSTDMMRSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNINQFMVRAGAAWVYEQYNTD LRHNSQVADFKKL >gi|296918658|gb|GG773042.1| GENE 219 237593 - 237784 167 63 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0003 NR:ns ## KEGG: EcSMS35_A0003 # Name: repA2 # Def: replication protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 63 24 86 86 99 100.0 3e-20 MTDSEKQMAAVARKRLTHKEIKVFVKNPLKDLMVEYCEREGITQAQFIEKIIKDELQRLD ILK >gi|296918658|gb|GG773042.1| GENE 220 238128 - 238934 698 268 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0002 NR:ns ## KEGG: EcSMS35_A0002 # Name: repA1 # Def: replication protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 268 22 289 289 464 99.0 1e-129 MFTPREGAGTLKFCEKLMEKAVGFTSRFDFAIHVAHARSKGLRRRMPPVLRRRAIDALLQ GLCFHYDPLANRVQCSITTLAIECGLATESAAGKLSITRATRALTFLAELGLITYQTEYD PLIGCYIPTDITFTPALFAALDVSEDAVVAARRSRVEWENRQRKKQGLDTLGMDELIAKA WRFVRERFRSYQTELKSRGIKRARARRDANRERQDIVTLVKRQLTREISEGRFTANREAV KREVERRVKERMILSRNRNYSRLATASP >gi|296918658|gb|GG773042.1| GENE 221 239415 - 239693 204 92 aa, chain - ## HITS:1 COG:no KEGG:pECS88_0111 NR:ns ## KEGG: pECS88_0111 # Name: not_defined # Def: conserved hypothetical protein, predicted dehydrogenase # Organism: E.coli_S88 # Pathway: not_defined # 1 87 1 87 88 159 96.0 5e-38 MNIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGGIWNPWSGGAYRNACMQNSRYTFH YTGFPPGDIDERSWMQMSDRVRGGGGGAAFQL >gi|296918658|gb|GG773042.1| GENE 222 239690 - 239959 155 89 aa, chain - ## HITS:1 COG:no KEGG:EAMY_0624 NR:ns ## KEGG: EAMY_0624 # Name: not_defined # Def: hypothetical protein # Organism: E.amylovora # Pathway: not_defined # 1 89 1 89 89 107 84.0 2e-22 MDTILLTGLFAAFFTTFAFAPQSIKTIRTRNTEGISVVMYIMFLTGVISWIAYGIMRSDF AVLIANIVTLFLAAPVLVITLINRRKKHV >gi|296918658|gb|GG773042.1| GENE 223 239961 - 240365 89 134 aa, chain - ## HITS:1 COG:no KEGG:APECO1_O1CoBM84 NR:ns ## KEGG: APECO1_O1CoBM84 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 134 206 339 339 278 97.0 7e-74 MGTKSDGQVEVDDNGYVMGSSEKGAYFRVHASKSETDHNLGLHIQLVFENGEIRYSTHHE NRLLLILFNDTNTETIGFDALKRLPDPPRELPFWSDSFIHLHDDWCALIKYGHSSPKLAD LSSGLHIQEIIEAF >gi|296918658|gb|GG773042.1| GENE 224 240337 - 240744 111 135 aa, chain - ## HITS:1 COG:BS_yhjJ KEGG:ns NR:ns ## COG: BS_yhjJ COG0673 # Protein_GI_number: 16078117 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Bacillus subtilis # 13 126 88 204 350 84 35.0 8e-17 MNEWLRYKQLPFVCEKPLSTDLNSARYLQEIAPKGSIVSFNYRYNPVIDMIMRLRNEKKL GELHFFSAEFNKNSALTRHHLTWRDSAQQSKSSGALGDLSCHLLDLFCFIGESPVVVHGI KTVKGTRGYKIRWSG >gi|296918658|gb|GG773042.1| GENE 225 241113 - 241424 177 103 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0115 NR:ns ## KEGG: pECS88_0115 # Name: cvaC # Def: colicin V precursor (microcin V bacteriocin) # Organism: E.coli_S88 # Pathway: not_defined # 1 103 1 103 103 155 100.0 5e-37 MRTLTLNELDSVSGGASGRDIAMAIGTLSGQFVAGGIGAAAGGVAGGAIYDYASTHKPNP AMSPSGLGGTIKQKPEGIPSEAWNYAAGRLCNWSPNNLSDVCL >gi|296918658|gb|GG773042.1| GENE 226 241594 - 243690 176 698 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 508 696 16 210 245 72 32 2e-11 MTNRNFRQIINLLDLRWQRRVPVIHQTETAECGLACLAMICGHFGKNIDLIYLRRKFNLS ARGATLAGINGIAEQLGMATRALSLELDELRVLKTPCILHWDFSHFVVLVSVKRNRYVLH DPARGIRYISREEMSRYFTGVALEVWPGSEFQSETLQTRISLRSLINSIYGIKRTLAKIF CLSVVIEAINLLMPVGTQLVMDHAIPAGDRGLLTLISAALMFFILLKAATSTLRAWSSLV MSTLINVQWQSGLFDHLLRLPLAFFERRKLGDIQSRFDSLDTLRATFTTSVIGFIMDSIM VVGVCVMMLLYGGYLTWIVLCFTTIYIFIRLVTYGNYRQISEECLVREARAASYFMETLY GIATVKIQGMVGIRGAHWLNMKIDAINSGIKLTRMDLLFGGINTFVTACDQIVILWLGAG LVIDNQMTIGMFVAFSSFRGQFSERVASLTSFLLQLRIMSLHNERIADIALHEKEEKKPE IEIVADMGPISLETNGLSYRYDSQSAPIFSALSLSVAPGESVAITGASGAGKTTLMKVLC GLFEPDSGRVLINGIDIRQIGINNYHRMIACVMQDDRLFSGSIRENICGFAEEMDEEWMV ECARASHIHDVIMNMPMGYETLIGELGEGLSGGQKQRIFIARALYRKPGILFMDEATSAL DSESEHFVNVAIKNMNITRVIIAHRETTLRTVDRVISI >gi|296918658|gb|GG773042.1| GENE 227 243683 - 244957 682 424 aa, chain - ## HITS:1 COG:YPO0099 KEGG:ns NR:ns ## COG: YPO0099 COG0845 # Protein_GI_number: 16120446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 16 424 2 411 411 371 47.0 1e-102 MFRQDALENRKMKWQGRAILLPGIPLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVT TWPRAVNIYSGVQGFVVRQFVHEGQLIKKGDPVYLIDISKSTRNGIVTDNHRRDIENQLV RVDNIISRLEESKKITLDTLEKQRLQYTDAFRRSSDIIQRAEEGIKIMKNNMENYRYYQS KGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQAADFDNRIYQMEL QRLELQKELVNTDVEGEIIIRALSDGKVDSLSVTVGQMVNTGDSLLQVIPENIENYYLIL WVPNDAVPYISAGDKVNIRYEAFPSEKFGQFSATVKTISRTPASTQEMLTYKGAPQNTPG ASVPWYKVIATPEKQIIRYDEKYLPLENGMKAESTLFLEKRRIYQWMLSPFYDMKHSATG PIND >gi|296918658|gb|GG773042.1| GENE 228 245601 - 248822 4247 1073 aa, chain - ## HITS:1 COG:ECs0036 KEGG:ns NR:ns ## COG: ECs0036 COG0458 # Protein_GI_number: 15829290 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Escherichia coli O157:H7 # 1 1073 1 1073 1073 2117 99.0 0 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA DAIDKAEDRRRFDVAMKKIGLETARSGIAHSMEEALAVAAEVGFPCIIRPSFTMGGSGGG IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVG ITGLHAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDT AYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP VIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIGYPLVVRPSYVL GGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIME HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLI EVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKF PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDL AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGR RAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK >gi|296918658|gb|GG773042.1| GENE 229 248840 - 249883 1035 347 aa, chain - ## HITS:1 COG:ECs0035 KEGG:ns NR:ns ## COG: ECs0035 COG0505 # Protein_GI_number: 15829289 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Escherichia coli O157:H7 # 1 347 36 382 382 709 99.0 0 MTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNT EDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNG MDLAKEVTTAEPYSWTQGSWTLTGGLPEAKKEDELPYHVVAYDFGAKRNILRMLVDRGCR LTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLL ALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDG TLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIALIEQYRKTAK >gi|296918658|gb|GG773042.1| GENE 230 250444 - 251265 911 273 aa, chain - ## HITS:1 COG:ECs0034 KEGG:ns NR:ns ## COG: ECs0034 COG0289 # Protein_GI_number: 15829288 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Escherichia coli O157:H7 # 1 273 1 273 273 472 99.0 1e-133 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGV TVQSSLDAIKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAAD IAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAH ALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSR MTFANGAVRSALWLSGKESGLFDMRDVLDLNNL >gi|296918658|gb|GG773042.1| GENE 231 251426 - 251791 186 121 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0030 NR:ns ## KEGG: ECS88_0030 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 121 1 121 121 200 100.0 2e-50 MTYGEAYLEGWKNIFNYEGVSNRFEFWSFMIGSGVICLLPLLCWWLAVTINNDYGVFIFF ALPASFILTLIFAIPAIALAVRRMHDIGYSGWWVTIVVLIPVTGVILLILCCLPSKSQDQ A >gi|296918658|gb|GG773042.1| GENE 232 251814 - 252728 834 304 aa, chain - ## HITS:1 COG:yaaF KEGG:ns NR:ns ## COG: yaaF COG1957 # Protein_GI_number: 16128024 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli K12 # 1 303 1 303 304 573 98.0 1e-163 MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNVDI PLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRQPLGIPAFLAIRDALMRAPEPVTL VAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSG IEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAW LVRPELFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLDVKGFQQWVAEVL ALAL >gi|296918658|gb|GG773042.1| GENE 233 252794 - 253744 441 316 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 298 1 287 632 174 34 4e-42 MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQI SEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIG HAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDA LRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGK RAFLIDDATDIQEEWVKEAKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENI VFEVPKELRVDIREVD >gi|296918658|gb|GG773042.1| GENE 234 253746 - 254195 257 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225086978|ref|YP_002658248.1| ribosomal protein S2 [gamma proteobacterium NOR5-3] # 1 144 1 143 148 103 36 8e-21 MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDK TTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDS ITVDFNHPLAGQTVHFDIEVLEIDPALEA >gi|296918658|gb|GG773042.1| GENE 235 254303 - 254797 591 164 aa, chain - ## HITS:1 COG:lspA KEGG:ns NR:ns ## COG: lspA COG0597 # Protein_GI_number: 16128021 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Escherichia coli K12 # 1 164 1 164 164 305 99.0 2e-83 MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSF LADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGF VVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ >gi|296918658|gb|GG773042.1| GENE 236 254797 - 257613 3127 938 aa, chain - ## HITS:1 COG:ileS KEGG:ns NR:ns ## COG: ileS COG0060 # Protein_GI_number: 16128020 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 938 1 938 938 1944 99.0 0 MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYA NGSIHIGHSVNKILKDIIIKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAA EFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHK GAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFLAVDQDALKTKFGVSNVNGPISLVIW TTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVSDYTILGTVKGAE LELLRFTHPFMDFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPD GTYLPGTYPTLDGVNVFKANDIVIALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQ WFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHK DTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGST HSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQG RKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTAR FLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCS VEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPG EREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAV TLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEK CPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKRKFA >gi|296918658|gb|GG773042.1| GENE 237 257656 - 258597 391 313 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 1 307 1 312 317 155 33 2e-36 MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPL ELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKF LAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLAL AESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGV ANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDE LTAREFFGLTKPA >gi|296918658|gb|GG773042.1| GENE 238 258926 - 259189 422 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15799705|ref|NP_285717.1| 30S ribosomal protein S20 [Escherichia coli O157:H7 EDL933] # 1 87 1 87 87 167 98 6e-40 MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDR QAAKGLIHKNKAARHKANLTAQINKLA >gi|296918658|gb|GG773042.1| GENE 239 259285 - 260184 902 299 aa, chain - ## HITS:1 COG:nhaR KEGG:ns NR:ns ## COG: nhaR COG0583 # Protein_GI_number: 16128014 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 299 3 301 301 597 94.0 1e-171 MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEP SELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVLDAAVVEDE QIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSMKIGECGVSFWCTNPLPE KPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGATHNAIFV APSLYANDFYNDDSVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFTPASK >gi|296918658|gb|GG773042.1| GENE 240 260250 - 261416 1142 388 aa, chain - ## HITS:1 COG:ECs0017 KEGG:ns NR:ns ## COG: ECs0017 COG3004 # Protein_GI_number: 15829271 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 630 98.0 1e-180 MKHLHRFFSSDASGGIILIIAAVLAMIMANSGATSGWYHDFLETPVQLRVGTLEINKNML LWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADP ITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYTNDLS MASLGVAAVAIAVLVVLNLCGVRRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLK EKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLEGLTSILPLGIIAGLLIGK PLGISLFCWLALRLKLAHLPEGTTYQQIMAVGILCGIGFTMSIFIASLAFGSVDPELINW AKLGILVGSISSAVIGYSWLRVRLRPSV >gi|296918658|gb|GG773042.1| GENE 241 261651 - 262646 411 331 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0019 NR:ns ## KEGG: ECS88_0019 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 331 91 421 421 680 100.0 0 MYCHHCEKTFITLEHVITTPRGALLALMIEQGEALADIRKSLLLNSTGLSRELLKLAREA NYKESRQCFPASDITLSTRAFRVKYNGSNNSLYALVTAEEQSGRVVAISTNYSPSAVEQH YQYTSNYEERMSPGTLAHHVQRKELLTMRRDTLFDIDYGPAVLHQNDPGMLVKPVLPAYR HFELVRILTDEHSNNVQHYLDHECFILGGCLMANLQHIHQGRCHISFVKERGVAPATIDF PPRLFLSGGVRNNVWRAFSNRNYSMAVCNLTGSKKVREMRHATLNSATRFIHFVENHPFL ISLNRMSPANVVSTLDILKHLWNKKLEHGTI >gi|296918658|gb|GG773042.1| GENE 242 263039 - 264532 1204 497 aa, chain - ## HITS:1 COG:STM0035 KEGG:ns NR:ns ## COG: STM0035 COG3119 # Protein_GI_number: 16763425 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Salmonella typhimurium LT2 # 1 497 1 497 497 901 87.0 0 MQKTLMASLIGLAVCTGNAFNPVVAAETKQPNLVIIMADDLGYGDLATYGHQIVKTPNID RLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPTGKDVALGRNELTIANLL KAQGYDTAMMGKLHLNAGGDRTDQPQAKDMGFDYSLVNTAGFVTDATLDNAKERPRYGMV YPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTEVHSPLASPKKYL DMYSQYMSAYQKQHPDLFYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAMGEEDNT IVIFTSDNGPVTREARKVYELNLAGETDGLRGRKDNLWEGGIRVPAIIKYGKHLPQGMVS DTPVYGLDWMPTLAKMMNFKLPTDRTFDGESLVPVLEQKALKREKPLIFGIDMPFQDDPT DEWAIRDGDWKMIIDRNNKPKYLYNLKSDRYETLNLIGKKPDIEKQMYGKFLKYKTDIDN DSLMKARGDKPEAVTWG >gi|296918658|gb|GG773042.1| GENE 243 264552 - 265313 550 253 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0017 NR:ns ## KEGG: ECS88_0017 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 253 1 253 253 467 100.0 1e-130 MSAKRRLLIACALTTIFYHLPAYSSLEYKGSFGSINAGYADWNSGFINTHRGEVWKVTAD FGVNFKEAEFYSFYESNVLNHAVAGRNHTVSAMTHVRLFDSNMTFFGKIYGQWDNSWGDD LDMFYGLGYLGWNGSWGFFKPYIGLHNQSGDYVSAKYGQTNGWNGYVVGWTAVLPFTLFD EKFVLSNWNEIELDRNDAYAEQQFGRNGLNGGLTVAWKFYPRWKASVTWRYFDNKLGYDG FGDQMIYMLGYDF >gi|296918658|gb|GG773042.1| GENE 244 265925 - 266077 150 50 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0016 NR:ns ## KEGG: ECO103_0016 # Name: mokC # Def: regulatory protein MokC for HokC # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 50 20 69 69 74 100.0 2e-12 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE >gi|296918658|gb|GG773042.1| GENE 245 266201 - 267331 1230 376 aa, chain - ## HITS:1 COG:ECs0015 KEGG:ns NR:ns ## COG: ECs0015 COG0484 # Protein_GI_number: 15829269 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Escherichia coli O157:H7 # 1 376 1 376 376 698 100.0 0 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDS QKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYN MELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQ QTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAP AGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQTG KLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNEKQKQLLQELQESFGGPTGEHNSPRS KSFFDGVKKFFDDLTR >gi|296918658|gb|GG773042.1| GENE 246 267420 - 269336 2345 638 aa, chain - ## HITS:1 COG:ECs0014 KEGG:ns NR:ns ## COG: ECs0014 COG0443 # Protein_GI_number: 15829268 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 638 1 638 638 1106 100.0 0 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVT NPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVL KKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG LDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV TRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKE PRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPT KHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA DGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGD HLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLME IAQQQHAQQQTAGADASANNAKDDDVVDAEFEEVKDKK >gi|296918658|gb|GG773042.1| GENE 247 269708 - 270112 325 134 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0013 NR:ns ## KEGG: ECS88_0013 # Name: yaaI # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 134 1 134 134 241 100.0 9e-63 MKSVITISASLAISLMLCCTAQANDHKILGVIAMPRNETNDLALKLPVCRIVKRIQLSAD HGDLQLSGASIYFKATRSASQTLNIPSEIKEEQTTDWININSDNDNKRCVSKITFSGHTV NSSDMATLKIIGDD >gi|296918658|gb|GG773042.1| GENE 248 270138 - 270851 537 237 aa, chain + ## HITS:1 COG:yaaW KEGG:ns NR:ns ## COG: yaaW COG4735 # Protein_GI_number: 16128005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 237 1 237 237 394 99.0 1e-110 MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLMRNELFKSMEGHPERHR RNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKLKADKEMSTFEIEQQLLEQ FLRNTWKKMDEEHKQEFLHAVDARVNELEELLPLLMKDKLLAKGVSHLLSSQLTRILRTH AAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVTIPAVLQIACLRRMVSATQV >gi|296918658|gb|GG773042.1| GENE 249 271000 - 271566 772 188 aa, chain + ## HITS:1 COG:ECs0010 KEGG:ns NR:ns ## COG: ECs0010 COG1584 # Protein_GI_number: 15829264 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 298 99.0 3e-81 MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIFYGGIAQIFAGLLEYKK GNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVYLGLWGIFTLFMFFGTLKG ARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLICGASAIYLAMGEVLNEQFGRT VLPIGESH >gi|296918658|gb|GG773042.1| GENE 250 271771 - 272358 692 195 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 6 191 2 191 194 271 73 3e-71 MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCE LVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSRQV GVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFASVPYCIQLLEGPYVETAPEV VAAFRPKSARREVSE >gi|296918658|gb|GG773042.1| GENE 251 272473 - 273426 1249 317 aa, chain - ## HITS:1 COG:ECs0008 KEGG:ns NR:ns ## COG: ECs0008 COG0176 # Protein_GI_number: 15829262 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 608 99.0 1e-174 MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAK QQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYN DAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPFVG RILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCD RLTIAPALLKELAESEGAIERKLSYTGEVKARPARITESEFLWQHNQDPMAVDKLAEGIR KFAVDQEKLEKMIGDLL >gi|296918658|gb|GG773042.1| GENE 252 273705 - 275135 807 476 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 6 447 8 446 456 315 40 1e-84 MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSLKNSIHPQPGGLTS FQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYKERD ANGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYAIIFSGVQANAVARALSFSFDFPPLV TGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLTCLVICVMNIGQLPHVIWSIFES AFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSTPNAAAAAASWPPHPAAQGIVQM IGIFIDTLVICTASAMLILLAGNGTTYMPLEGIQLIQKAMRVLMGSWGAEFVTLVVILFA FSSIVTNYIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSLPLMWQLADIIMACMA ITNLTAILLLSPVVHTIASDYLRQRKLGVRPVFDPLRYPEIGRQLSPDAWDDVSQE >gi|296918658|gb|GG773042.1| GENE 253 275205 - 275981 757 258 aa, chain + ## HITS:1 COG:ECs0006 KEGG:ns NR:ns ## COG: ECs0006 COG3022 # Protein_GI_number: 15829260 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 506 98.0 1e-143 MLILISPAKTLDYQSPLTTTRYTLPELLDNAQQLIHEARKLTPPQISSLMRISDKLAGIN AARFHDWQPNFTPENARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRP LDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVK PKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFF DEASSSNGELVFKRYEQR >gi|296918658|gb|GG773042.1| GENE 254 276021 - 276317 208 98 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0005 NR:ns ## KEGG: ECS88_0005 # Name: yaaX # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 98 1 98 98 170 100.0 2e-41 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH YEWRGNRWHPYGPPPSPRHNKHNDHRGDHRPEPDKHHR >gi|296918658|gb|GG773042.1| GENE 255 276531 - 277817 1535 428 aa, chain - ## HITS:1 COG:ECs0004 KEGG:ns NR:ns ## COG: ECs0004 COG0498 # Protein_GI_number: 15829258 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 842 99.0 0 MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILS AFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQILTH IAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETV AIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQEARNQ LVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNA MDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRA LRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAAL RKLMMNHQ >gi|296918658|gb|GG773042.1| GENE 256 277818 - 278750 734 310 aa, chain - ## HITS:1 COG:ECs0003 KEGG:ns NR:ns ## COG: ECs0003 COG0083 # Protein_GI_number: 15829257 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 640 99.0 0 MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETFSLNNLGRFADKLPSEP RENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACSVVAALMAMNEHCGKPLND TRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDIISQQVPGFDEWLWVLAYPGI KVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQPELAAKLMKDVIAEPYRERLLP GFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTAQRVADWLGKNYLQNQEGFVHICRL DTAGARVLEN >gi|296918658|gb|GG773042.1| GENE 257 278752 - 281214 2183 820 aa, chain - ## HITS:1 COG:thrA_1 KEGG:ns NR:ns ## COG: thrA_1 COG0527 # Protein_GI_number: 16127996 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli K12 # 1 460 1 460 460 911 100.0 0 MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDA LPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINA ALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHYLESTVDIAESTRRIAASRIP ADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQV PDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQFQIPCLIKNTGNPQAPGTLIGASRD EDELPVKGISNLNNMAMFSVSGPGMKGMVGMAARVFAAMSRARISVVLITQSSSEYSISF CVPQSDCVRAERAMQEEFYLELKEGLLEPLAVTERLAIISVVGDGMRTLRGISAKFFAAL ARANINIVAIAQGSSERSISVVVNNDDATTGVRVTHQMLFNTDQVIEVFVIGVGGVGGAL LEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQAKEPFNLGRLIRL VKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSR RKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLA REMGYTEPDPRDDLSGMDVARKLLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMA NLSQLDDLFAARVAKARDEGKVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAF YSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGV >gi|296918658|gb|GG773042.1| GENE 258 281589 - 282275 450 228 aa, chain - ## HITS:1 COG:lasT KEGG:ns NR:ns ## COG: lasT COG0565 # Protein_GI_number: 16132220 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Escherichia coli K12 # 1 228 1 228 228 419 97.0 1e-117 MRITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPVARWVAHGSGDIIDNIKV FKTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLT NEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQQPAKSDTTADQHQLQALRER AMTLLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRLLHDIEKNITK >gi|296918658|gb|GG773042.1| GENE 259 282911 - 283627 842 238 aa, chain + ## HITS:1 COG:ECs5359 KEGG:ns NR:ns ## COG: ECs5359 COG0745 # Protein_GI_number: 15834613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 470 100.0 1e-133 MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGK NGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR TMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQ SRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED >gi|296918658|gb|GG773042.1| GENE 260 283682 - 285034 1171 450 aa, chain - ## HITS:1 COG:ECs5358 KEGG:ns NR:ns ## COG: ECs5358 COG4452 # Protein_GI_number: 15834612 # Func_class: V Defense mechanisms # Function: Inner membrane protein involved in colicin E2 resistance # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 834 98.0 0 MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDVIRQSTSGPQKLVGPLI AIPVTELYTVQEDDKTVERKRSFIHFWLPESLMVDGNQNVEERKIGIYTGQVWHSDLTLK ADFDVSRLSELDAPNITLGKPFIVISVGDARGIGVVKAPEVNGTALTIEPGTGLEQGGQG VHIPLPEGDWRKQNLKLNVALNLSGTGDLSVVPGGRYSEMTLTSNWPHPSFLGDFLPAKR EVSESGFQAQWQSSWFANNLGERLASGNDTGWENFPAFSVAVTTPADQYQLTDRATKYAI LLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLVMFYLLLLALSEHTGFTVAWIIASLIG ALMNGIYLQAVLKGWRNSMLFTLALLLLDGVMWGLLNSADSALLLGTSVLVVALAGMMFV TRNIDWYAFSLPKMKASKEVTMDDELRIWK >gi|296918658|gb|GG773042.1| GENE 261 285092 - 286516 1250 474 aa, chain - ## HITS:1 COG:creC KEGG:ns NR:ns ## COG: creC COG0642 # Protein_GI_number: 16132216 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 474 1 474 474 914 99.0 0 MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLIDTATLLAELARPDLLSG DPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDAQGKVLFDSANKAVGQDYSRW NDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRLIGVLSVGKPNAAMAPVIKRS ERRILWASAILLGIALVIGAGMVWWINRSIARLTRYADSVTDNKPVPLPDLGSSELRKLA QALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRGAAEILREGPPPEVVARFTDNILTQ NARMQALVETLLRQARLENRQEVVLTAVDVAALFRRVSEARTVQLAEKNITLHVMPTEVN VASEPALLEQALGNLLDNAIDFTPESGCITLSAEVDQEYVTLKVLDTGSGIPDYALSRIF ERFYSLPRANGQKSSGLGLAFVSEVARLFNGEVTLRNVQEGGVLASLRLHRHFT >gi|296918658|gb|GG773042.1| GENE 262 286516 - 287205 569 229 aa, chain - ## HITS:1 COG:creB KEGG:ns NR:ns ## COG: creB COG0745 # Protein_GI_number: 16132215 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 229 1 229 229 446 98.0 1e-125 MQRETVWLVEDEQGIADTLVYMLQQEGFDVEVFERGLPVLDKARQQVPDVMILDVGLPDI SGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLR RVKKFSTPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLM DSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSLRGL >gi|296918658|gb|GG773042.1| GENE 263 287218 - 287691 508 157 aa, chain - ## HITS:1 COG:ECs5355 KEGG:ns NR:ns ## COG: ECs5355 COG3045 # Protein_GI_number: 15834609 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 291 100.0 3e-79 MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRA KTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVR FYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ >gi|296918658|gb|GG773042.1| GENE 264 287902 - 288771 930 289 aa, chain + ## HITS:1 COG:ECs5354 KEGG:ns NR:ns ## COG: ECs5354 COG2207 # Protein_GI_number: 15834608 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 597 100.0 1e-171 MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRL GEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYG LNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFI LTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIRR >gi|296918658|gb|GG773042.1| GENE 265 288768 - 289415 620 215 aa, chain - ## HITS:1 COG:ECs5353 KEGG:ns NR:ns ## COG: ECs5353 COG0406 # Protein_GI_number: 15834607 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 406 100.0 1e-113 MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTR RTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIPEGE SMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSIS RVDYQESLWLASGWVVETAGDISHLDAPALDELQR >gi|296918658|gb|GG773042.1| GENE 266 289458 - 289988 401 176 aa, chain + ## HITS:1 COG:yjjX KEGG:ns NR:ns ## COG: yjjX COG1986 # Protein_GI_number: 16132211 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 173 1 173 173 331 100.0 4e-91 MLIMHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARN RVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSATLPLPAVILEKVREG EALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVYQAL >gi|296918658|gb|GG773042.1| GENE 267 290073 - 290399 371 108 aa, chain - ## HITS:1 COG:ECs5351 KEGG:ns NR:ns ## COG: ECs5351 COG2973 # Protein_GI_number: 15834605 # Func_class: K Transcription # Function: Trp operon repressor # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 166 100.0 9e-42 MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEE LLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLLKSD >gi|296918658|gb|GG773042.1| GENE 268 290489 - 292426 1618 645 aa, chain - ## HITS:1 COG:ECs5350 KEGG:ns NR:ns ## COG: ECs5350 COG0741 # Protein_GI_number: 15834604 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli O157:H7 # 1 645 10 654 654 1243 99.0 0 MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAWDNRQMDVVEQMMPGLK DYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQSRFVNELARREDWRGLLA FSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSQPNACDKLFSVWRASGKQD PLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDF TRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAK WRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERG REAEAKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGSEIARVRELMY WNLDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAY NDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPG YSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAV AFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY >gi|296918658|gb|GG773042.1| GENE 269 292637 - 294304 2274 555 aa, chain + ## HITS:1 COG:ECs5349 KEGG:ns NR:ns ## COG: ECs5349 COG0488 # Protein_GI_number: 15834603 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 555 1 555 555 1104 100.0 0 MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIE GEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDK LAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEK PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW EGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNST EYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGA GKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNT EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETL RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA DALEPKRIKYKRIAK >gi|296918658|gb|GG773042.1| GENE 270 294611 - 295843 1358 410 aa, chain - ## HITS:1 COG:nadR_3 KEGG:ns NR:ns ## COG: nadR_3 COG3172 # Protein_GI_number: 16132207 # Func_class: H Coenzyme transport and metabolism # Function: Predicted ATPase/kinase involved in NAD metabolism # Organism: Escherichia coli K12 # 224 410 1 187 187 381 98.0 1e-105 MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFP RQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDDTRDRALFEDSAMSQQPTV PDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGIQPDLIYTSEE ADAPQYMEHLGIDTVLVDPKRTFMSISGAQIRENPFRYWEYIPTEVKPFFVRTVAILGGE SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVK YANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLG SSVDRKEFQNLLAEMLEENNIEFVRVEEDDYDSRFLRCVELVREMMGEQR >gi|296918658|gb|GG773042.1| GENE 271 295864 - 297246 1410 460 aa, chain - ## HITS:1 COG:ECs5347 KEGG:ns NR:ns ## COG: ECs5347 COG1066 # Protein_GI_number: 15834601 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Escherichia coli O157:H7 # 1 460 1 460 460 902 100.0 0 MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL >gi|296918658|gb|GG773042.1| GENE 272 297295 - 297429 81 44 aa, chain - ## HITS:1 COG:ZserB KEGG:ns NR:ns ## COG: ZserB COG0560 # Protein_GI_number: 15804959 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Escherichia coli O157:H7 EDL933 # 1 44 279 322 322 93 100.0 1e-19 MIKAAGLGIAYHAKPKVNEKAEVTIRHADLMGVFCILSGSLNQK >gi|296918658|gb|GG773042.1| GENE 273 297426 - 298301 887 291 aa, chain - ## HITS:1 COG:ECs5346 KEGG:ns NR:ns ## COG: ECs5346 COG0560 # Protein_GI_number: 15834600 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Escherichia coli O157:H7 # 1 277 1 277 322 547 100.0 1e-155 MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLDKQRLTQYQSKLG AAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLGKIPHLRTPGLLVMDMDST AIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENL PLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTGNVI GDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLGGGGRLAMEPMTCR >gi|296918658|gb|GG773042.1| GENE 274 298407 - 299051 726 214 aa, chain + ## HITS:1 COG:ECs5345_1 KEGG:ns NR:ns ## COG: ECs5345_1 COG3726 # Protein_GI_number: 15834599 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein affecting hemolysin expression # Organism: Escherichia coli O157:H7 # 1 205 1 205 224 366 100.0 1e-101 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT RTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE >gi|296918658|gb|GG773042.1| GENE 275 299079 - 300095 1097 338 aa, chain + ## HITS:1 COG:Z5988_2 KEGG:ns NR:ns ## COG: Z5988_2 COG0095 # Protein_GI_number: 15804958 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Escherichia coli O157:H7 EDL933 # 1 338 5 342 342 696 99.0 0 MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRR MEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASG RNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITS VRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEAEIISPDKTPDLPNFAETFARQS SWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQG CLYRADMLQQECEALLVDFPDQEKELRKLSTWIAGAVR >gi|296918658|gb|GG773042.1| GENE 276 300127 - 300390 211 87 aa, chain + ## HITS:1 COG:ECs5344 KEGG:ns NR:ns ## COG: ECs5344 COG1396 # Protein_GI_number: 15834598 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 152 100.0 1e-37 MIDLENQEREIINLMFSQRISWLAAVRIRHKLSLAEVSKMLGISINSLKQIEKTERLSSN IKSKMAEIYGCPPELLICPSWMTAEHK >gi|296918658|gb|GG773042.1| GENE 277 300550 - 301269 926 239 aa, chain - ## HITS:1 COG:ECs5343 KEGG:ns NR:ns ## COG: ECs5343 COG0813 # Protein_GI_number: 15834597 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 469 99.0 1e-132 MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISV MGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIR FKDHDFAAIADFDMVRNAVDAAKALGVDARVGNLFSADLFYSPDGEMFDVMEKYGILGVE MEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE >gi|296918658|gb|GG773042.1| GENE 278 301370 - 302593 1545 407 aa, chain - ## HITS:1 COG:ECs5342 KEGG:ns NR:ns ## COG: ECs5342 COG1015 # Protein_GI_number: 15834596 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Escherichia coli O157:H7 # 1 407 1 407 407 840 100.0 0 MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLG LAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGHWEIAGVPVLFEWGYFSDH ENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIAC HEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAP TVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDNTIVFT NFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMSLLRDDDILILTADHGCDPTWTGTDHT REHIPVLVYGPKVKPGSLGHRETFADIGQTLAKYFGTSDMEYGKAMF >gi|296918658|gb|GG773042.1| GENE 279 302645 - 303967 1741 440 aa, chain - ## HITS:1 COG:ZdeoA KEGG:ns NR:ns ## COG: ZdeoA COG0213 # Protein_GI_number: 15804954 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Escherichia coli O157:H7 EDL933 # 1 440 1 440 440 816 100.0 0 MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLT MAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHT GGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSI PLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLT DMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKL QAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALG MAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENSWQEAAKAVKAA IKLADKAPESTPTVYRRISE >gi|296918658|gb|GG773042.1| GENE 280 304134 - 304913 969 259 aa, chain - ## HITS:1 COG:ECs5340 KEGG:ns NR:ns ## COG: ECs5340 COG0274 # Protein_GI_number: 15834594 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 446 100.0 1e-125 MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTL KEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFD LVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPE SARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASSL LASLLKALGHGDGKSASSY >gi|296918658|gb|GG773042.1| GENE 281 305172 - 306722 1473 516 aa, chain + ## HITS:1 COG:no KEGG:JW4343 NR:ns ## KEGG: JW4343 # Name: yjjI # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 516 1 516 516 1069 99.0 0 MSTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDM FEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLG QLDALLQPYVRILTQDEIDVRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAAL KQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSL PLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENS FLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFV ANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGIS DILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEG SRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ >gi|296918658|gb|GG773042.1| GENE 282 306823 - 307557 626 244 aa, chain + ## HITS:1 COG:yjjW KEGG:ns NR:ns ## COG: yjjW COG1180 # Protein_GI_number: 16132196 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 1 244 44 287 287 483 96.0 1e-136 MGRCNDCGECVPQCPHQALQIVDGKVLWNAVVCEQCDTCLKMCPQHATPMAQSMSVDEVL SHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETGWEK LLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSICLLAERGKLAELRLLVIPDQVDYLH HIDELATFIKRLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRGVSRLIFP ALYL >gi|296918658|gb|GG773042.1| GENE 283 307770 - 308552 755 260 aa, chain - ## HITS:1 COG:yjjVm KEGG:ns NR:ns ## COG: yjjVm COG0084 # Protein_GI_number: 16132266 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli K12 # 1 258 1 258 259 491 95.0 1e-139 MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAEKYQPLY AALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQL KLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFSGSLQQAERFVQLGYKIGVGG TITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCELRPEP EDEIAEVLLNNTYAVFSVRG >gi|296918658|gb|GG773042.1| GENE 284 308549 - 309622 798 357 aa, chain - ## HITS:1 COG:yjjU KEGG:ns NR:ns ## COG: yjjU COG4667 # Protein_GI_number: 16132195 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Escherichia coli K12 # 1 357 1 357 357 729 99.0 0 MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGT SAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQ MDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGIN YLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ HHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLAT VGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVIDAPQANDPTFNNEDLA >gi|296918658|gb|GG773042.1| GENE 285 309744 - 309905 193 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|157147615|ref|YP_001454934.1| ## NR: gi|157147615|ref|YP_001454934.1| hypothetical protein CKO_03415 [Citrobacter koseri ATCC BAA-895] hypothetical protein CKO_03415 [Citrobacter koseri ATCC BAA-895] # 1 53 21 73 73 70 94.0 4e-11 MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFMGRKRP >gi|296918658|gb|GG773042.1| GENE 286 310032 - 310637 670 201 aa, chain - ## HITS:1 COG:ECs5334 KEGG:ns NR:ns ## COG: ECs5334 COG2823 # Protein_GI_number: 15834588 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 264 99.0 8e-71 MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAIT AKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLH VRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDR AESIAKAVDGVKSVKNDLKTK >gi|296918658|gb|GG773042.1| GENE 287 311030 - 312619 1980 529 aa, chain - ## HITS:1 COG:ECs5333 KEGG:ns NR:ns ## COG: ECs5333 COG4108 # Protein_GI_number: 15834587 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Escherichia coli O157:H7 # 1 529 1 529 529 1087 99.0 0 MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWM EMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVE DRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFK GVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNE FDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFV FKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAY PGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLS EEGAVQVFRPISNNDLIVGAVGVLQFDVVVSRLKSEYNVEAVYESVNVATARWVECADAK KFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH >gi|296918658|gb|GG773042.1| GENE 288 312710 - 313387 718 225 aa, chain - ## HITS:1 COG:ECs5332 KEGG:ns NR:ns ## COG: ECs5332 COG1011 # Protein_GI_number: 15834586 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 462 98.0 1e-130 MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITS LQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGF SALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAES DILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH >gi|296918658|gb|GG773042.1| GENE 289 313402 - 313848 749 148 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15804944|ref|NP_290986.1| ribosomal-protein-alanine N-acetyltransferase [Escherichia coli O157:H7 EDL933] # 1 148 1 148 148 293 99 7e-78 MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVV LDEATLFNIAVDPDYQRQGLGRVLLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGF NEATIRRNYYPTTDGREDAIIMALPISM >gi|296918658|gb|GG773042.1| GENE 290 313817 - 314230 389 137 aa, chain - ## HITS:1 COG:ECs5330 KEGG:ns NR:ns ## COG: ECs5330 COG3050 # Protein_GI_number: 15834584 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, psi subunit # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 253 100.0 6e-68 MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRA LTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTELRANPTARAA LWQQICTYEHDFFPRND >gi|296918658|gb|GG773042.1| GENE 291 314333 - 315364 264 343 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 78 334 106 368 371 106 30 1e-21 MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMG DNARFSLVATVDDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRS AEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWGEYSVDGLTVKTLPGVFSRDG LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL AANGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR IVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAIMTRQAKKG Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:52:08 2011 Seq name: gi|296918657|gb|GG773043.1| Escherichia coli MS 110-3 genomic scaffold Scfld702, whole genome shotgun sequence Length of sequence - 1034 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 66 - 1032 554 ## COG4733 Phage-related protein, tail component Predicted protein(s) >gi|296918657|gb|GG773043.1| GENE 1 66 - 1032 554 322 aa, chain + ## HITS:1 COG:ECs0842 KEGG:ns NR:ns ## COG: ECs0842 COG4733 # Protein_GI_number: 15830096 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 322 466 787 1137 628 96.0 1e-180 MGAEGLRHVPGDVIEICDDDYAGISIGGRVLAVNNQTRTLTLDREITLPSSGTTLISLAD GQGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTLRQRLFRCVSIRENDDGTYA ITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQVLARWDTPK VVKGVSFLLRLTVTADDGSERLVSTARTTETTYRFTQLALGNYRLTVRAVNAWGQQGDPA SVSFRIAAPAAPSQIELTPGYFQITATPHLAVYDPTVQFEFWFSEKRIADIRQVETTARY LGTALYWIAASINIKPGHDYYF Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:52:40 2011 Seq name: gi|296918656|gb|GG773044.1| Escherichia coli MS 110-3 genomic scaffold Scfld723, whole genome shotgun sequence Length of sequence - 101257 bp Number of predicted genes - 126, with homology - 126 Number of transcription units - 59, operones - 28 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 230 - 289 3.5 1 1 Tu 1 . + CDS 314 - 880 569 ## COG0637 Predicted phosphatase/phosphohexomutase + Prom 883 - 942 3.6 2 2 Op 1 5/0.267 + CDS 1021 - 1305 260 ## COG1238 Predicted membrane protein 3 2 Op 2 6/0.200 + CDS 1378 - 2934 1760 ## COG2918 Gamma-glutamylcysteine synthetase + Term 2949 - 2996 8.5 + Prom 2936 - 2995 4.7 4 3 Tu 1 . + CDS 3101 - 3616 547 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Term 3639 - 3673 8.1 5 4 Op 1 . - CDS 3682 - 4794 793 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 6 4 Op 2 . - CDS 4791 - 5498 530 ## ECS88_2952 hypothetical protein - Prom 5566 - 5625 5.2 - Term 5714 - 5751 2.1 7 5 Op 1 19/0.000 - CDS 5756 - 7294 1651 ## COG0477 Permeases of the major facilitator superfamily 8 5 Op 2 7/0.200 - CDS 7311 - 8483 1217 ## COG1566 Multidrug resistance efflux pump - Prom 8547 - 8606 1.9 - Term 8527 - 8562 5.0 9 6 Op 1 . - CDS 8610 - 9140 510 ## COG1846 Transcriptional regulators - Prom 9164 - 9223 5.2 10 6 Op 2 . - CDS 9231 - 9566 343 ## ECS88_2948 hypothetical protein 11 6 Op 3 4/0.467 - CDS 9556 - 10293 525 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Prom 10313 - 10372 8.4 12 7 Tu 1 . - CDS 10417 - 11601 1158 ## COG0477 Permeases of the major facilitator superfamily - Prom 11633 - 11692 4.5 13 8 Op 1 14/0.067 - CDS 11793 - 12785 1124 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components 14 8 Op 2 16/0.000 - CDS 12843 - 13907 1292 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 15 8 Op 3 5/0.267 - CDS 13900 - 15102 1233 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component - Prom 15132 - 15191 4.4 - Term 15307 - 15343 2.4 16 9 Op 1 24/0.000 - CDS 15458 - 16417 1003 ## COG0208 Ribonucleotide reductase, beta subunit 17 9 Op 2 18/0.000 - CDS 16427 - 18571 2053 ## COG0209 Ribonucleotide reductase, alpha subunit 18 9 Op 3 11/0.067 - CDS 18544 - 18954 234 ## COG1780 Protein involved in ribonucleotide reduction 19 9 Op 4 2/0.733 - CDS 18951 - 19196 253 ## COG0695 Glutaredoxin and related proteins - Prom 19263 - 19322 3.7 - Term 19261 - 19305 -0.4 20 10 Tu 1 . - CDS 19405 - 19836 509 ## COG2128 Uncharacterized conserved protein - Prom 19865 - 19924 3.2 + Prom 19827 - 19886 2.9 21 11 Tu 1 . + CDS 19924 - 21258 788 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 21463 - 21506 0.5 - Term 21249 - 21287 12.1 22 12 Tu 1 . - CDS 21335 - 21664 236 ## COG4575 Uncharacterized conserved protein - Prom 21790 - 21849 2.6 + Prom 21669 - 21728 3.4 23 13 Tu 1 . + CDS 21816 - 22160 353 ## G2583_3317 hypothetical protein - Term 22153 - 22186 3.5 24 14 Tu 1 . - CDS 22224 - 22673 383 ## ECUMN_2994 hypothetical protein - Prom 22853 - 22912 5.7 + Prom 23134 - 23193 6.3 25 15 Tu 1 . + CDS 23341 - 23745 471 ## COG2916 DNA-binding protein H-NS - Term 23596 - 23625 -0.5 26 16 Op 1 7/0.200 - CDS 23792 - 24316 424 ## COG0607 Rhodanese-related sulfurtransferase 27 16 Op 2 . - CDS 24326 - 24625 318 ## COG0640 Predicted transcriptional regulators - Prom 24649 - 24708 5.6 + Prom 24692 - 24751 4.8 28 17 Op 1 4/0.467 + CDS 24808 - 24966 206 ## COG0401 Uncharacterized homolog of Blt101 + Term 24982 - 25013 3.9 + Prom 24968 - 25027 2.2 29 17 Op 2 . + CDS 25050 - 25499 533 ## COG1652 Uncharacterized protein containing LysM domain - Term 25439 - 25471 4.0 30 18 Op 1 1/0.800 - CDS 25500 - 26162 684 ## COG1802 Transcriptional regulators 31 18 Op 2 4/0.467 - CDS 26183 - 27583 1402 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 27661 - 27720 3.1 - Term 27739 - 27792 6.0 32 19 Op 1 12/0.067 - CDS 27821 - 29101 1377 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases 33 19 Op 2 3/0.600 - CDS 29115 - 30563 1878 ## COG1012 NAD-dependent aldehyde dehydrogenases 34 19 Op 3 . - CDS 30586 - 31854 973 ## COG0579 Predicted dehydrogenase 35 19 Op 4 . - CDS 31874 - 32851 1080 ## ECS88_2923 hypothetical protein - Prom 33044 - 33103 5.5 - Term 33376 - 33403 1.5 36 20 Tu 1 . - CDS 33483 - 33719 130 ## ECS88_2921 hypothetical protein - Prom 33919 - 33978 4.1 + Prom 33629 - 33688 4.1 37 21 Tu 1 . + CDS 33712 - 34623 247 ## UTI89_C3012 hypothetical protein 38 22 Tu 1 . + CDS 34730 - 34954 218 ## ECS88_2919 hypothetical protein 39 23 Tu 1 . - CDS 35574 - 35870 98 ## COG0582 Integrase 40 24 Op 1 . - CDS 36707 - 36913 124 ## ECS88_2916 hypothetical protein 41 24 Op 2 . - CDS 36955 - 37074 70 ## ECS88_2915 hypothetical protein - Prom 37147 - 37206 8.0 - Term 37654 - 37685 -0.6 42 25 Tu 1 . - CDS 37930 - 38454 417 ## COG1896 Predicted hydrolases of HD superfamily - Prom 38516 - 38575 1.5 - Term 38540 - 38565 -0.5 43 26 Tu 1 . - CDS 38582 - 39406 836 ## COG5532 Uncharacterized conserved protein 44 27 Tu 1 . - CDS 39472 - 39834 504 ## ECS88_2911 hypothetical protein + Prom 40219 - 40278 1.6 45 28 Tu 1 . + CDS 40303 - 40815 228 ## ECS88_2910 hypothetical protein + Term 40839 - 40875 3.3 - Term 40975 - 41006 1.8 46 29 Tu 1 . - CDS 41018 - 41575 197 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 41692 - 41751 3.3 + Prom 41665 - 41724 2.2 47 30 Op 1 . + CDS 41783 - 41983 212 ## ECS88_2907 DNA-binding transcriptional regulator 48 30 Op 2 . + CDS 42027 - 42578 277 ## c3195 hypothetical protein 49 30 Op 3 . + CDS 42575 - 42913 70 ## ECUMN_0870 hypothetical protein 50 30 Op 4 . + CDS 42754 - 42933 134 ## gi|324112042|gb|EGC06020.1| hypothetical protein ERIG_03010 51 30 Op 5 . + CDS 42923 - 43390 217 ## ECS88_2903 phage replication protein O + Prom 43393 - 43452 25.3 52 31 Op 1 . + CDS 43540 - 43908 291 ## ECS88_2903 phage replication protein O 53 31 Op 2 . + CDS 43911 - 44399 123 ## ECS88_2902 hypothetical protein 54 31 Op 3 . + CDS 44399 - 45052 643 ## ECS88_2901 AdoMet-dependent methyltransferase 55 31 Op 4 . + CDS 45049 - 45375 171 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 56 31 Op 5 . + CDS 45372 - 45761 402 ## COG4570 Holliday junction resolvase 57 31 Op 6 . + CDS 45781 - 46578 680 ## ECS88_2898 KilA protein; KilA-N domain 58 31 Op 7 . + CDS 46670 - 47575 457 ## APECO1_3882 hypothetical protein 59 31 Op 8 . + CDS 47589 - 48341 188 ## ECS88_2896 antitermination protein Q; Qin prophage + Term 48407 - 48449 -0.3 + Prom 48448 - 48507 4.8 60 32 Op 1 . + CDS 48527 - 48862 279 ## ECS88_2895 hypothetical protein + Term 48870 - 48912 9.7 61 32 Op 2 . + CDS 48915 - 49319 260 ## ECS88_2894 holin protein 62 32 Op 3 . + CDS 49306 - 49782 485 ## COG4678 Muramidase (phage lambda lysozyme) + Prom 49801 - 49860 1.7 63 33 Tu 1 . + CDS 49978 - 50163 141 ## ECO26_0865 putative lipoprotein Rz1 precursor + Prom 50204 - 50263 4.1 64 34 Tu 1 . + CDS 50290 - 50538 261 ## UTI89_C2988 hypothetical protein 65 35 Tu 1 . - CDS 50645 - 51085 264 ## ECS88_2890 hypothetical protein - Prom 51114 - 51173 3.3 66 36 Tu 1 . + CDS 51188 - 51538 181 ## COG1403 Restriction endonuclease + Prom 51577 - 51636 4.1 67 37 Op 1 4/0.467 + CDS 51664 - 52158 490 ## COG3747 Phage terminase, small subunit 68 37 Op 2 . + CDS 52155 - 53888 1286 ## COG4626 Phage terminase-like protein, large subunit 69 37 Op 3 . + CDS 53906 - 54082 294 ## SPAB_02166 hypothetical protein 70 37 Op 4 3/0.600 + CDS 54082 - 55323 1127 ## COG4695 Phage-related protein 71 37 Op 5 5/0.267 + CDS 55301 - 55951 647 ## COG3740 Phage head maturation protease 72 37 Op 6 . + CDS 55966 - 57171 1666 ## COG4653 Predicted phage phi-C31 gp36 major capsid-like protein + Prom 57173 - 57232 47.8 73 38 Op 1 . + CDS 57271 - 57471 258 ## EFER_0607 hypothetical protein 74 38 Op 2 . + CDS 57474 - 57797 353 ## ECUMN_0895 hypothetical protein 75 38 Op 3 . + CDS 57794 - 58204 283 ## ECS88_2880 phage head-tail adaptor 76 38 Op 4 . + CDS 58179 - 58685 293 ## ECS88_2879 hypothetical protein 77 38 Op 5 . + CDS 58682 - 59242 549 ## ECS88_2878 hypothetical protein 78 38 Op 6 . + CDS 59251 - 59421 92 ## ECUMN_0899 hypothetical protein 79 38 Op 7 . + CDS 59405 - 60901 1456 ## COG4386 Mu-like prophage tail sheath protein gpL 80 38 Op 8 . + CDS 60901 - 61257 426 ## ECS88_2875 phage tail protein 81 38 Op 9 . + CDS 61257 - 61526 273 ## ECS88_2874 hypothetical protein + Term 61559 - 61589 4.3 82 39 Op 1 . + CDS 61668 - 63503 1709 ## ECS88_2872 phage tail tape measure protein 83 39 Op 2 4/0.467 + CDS 63549 - 64892 817 ## COG4228 Mu-like prophage DNA circulation protein 84 39 Op 3 4/0.467 + CDS 64889 - 65968 873 ## COG4379 Mu-like prophage tail protein gpP 85 39 Op 4 5/0.267 + CDS 65968 - 66516 525 ## COG4384 Mu-like prophage protein gp45 86 39 Op 5 4/0.467 + CDS 66516 - 66941 409 ## COG4381 Mu-like prophage protein gp46 87 39 Op 6 1/0.800 + CDS 66928 - 67380 133 ## COG3299 Uncharacterized homolog of phage Mu protein gp47 88 39 Op 7 2/0.733 + CDS 67295 - 68005 413 ## COG3299 Uncharacterized homolog of phage Mu protein gp47 89 39 Op 8 . + CDS 67996 - 68613 254 ## COG3778 Uncharacterized protein conserved in bacteria 90 39 Op 9 . + CDS 68617 - 69360 439 ## COG5301 Phage-related tail fibre protein 91 39 Op 10 . + CDS 69360 - 69962 458 ## COG5525 Bacteriophage tail assembly protein + Term 70155 - 70195 7.2 92 40 Op 1 . - CDS 69934 - 70377 245 ## ECS88_2863 tail fibre assembly protein 93 40 Op 2 . - CDS 70380 - 70670 130 ## ECS88_2862 hypothetical protein + Prom 70639 - 70698 4.4 94 41 Tu 1 . + CDS 70901 - 71029 116 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 71264 - 71310 4.7 - Term 71061 - 71106 5.4 95 42 Tu 1 . - CDS 71125 - 72639 290 ## COG1479 Uncharacterized conserved protein - Prom 72763 - 72822 3.3 + Prom 73784 - 73843 4.5 96 43 Tu 1 . + CDS 74066 - 74839 133 ## COG3680 Uncharacterized protein conserved in bacteria + Prom 74912 - 74971 2.4 97 44 Tu 1 . + CDS 75050 - 75343 110 ## ECS88_2855 hypothetical protein + Term 75351 - 75378 -0.1 - Term 75338 - 75396 7.3 98 45 Op 1 . - CDS 75431 - 76219 342 ## ECS88_2854 hypothetical protein 99 45 Op 2 . - CDS 76216 - 76413 110 ## ECS88_2853 hypothetical protein - Prom 76437 - 76496 4.5 100 46 Tu 1 . - CDS 77375 - 77857 479 ## COG0691 tmRNA-binding protein - Prom 77982 - 78041 5.3 + Prom 77830 - 77889 2.3 101 47 Op 1 9/0.200 + CDS 78016 - 78465 322 ## COG2867 Oligoketide cyclase/lipid transport protein 102 47 Op 2 . + CDS 78455 - 78745 339 ## COG2914 Uncharacterized protein conserved in bacteria + Term 78752 - 78796 7.8 - Term 78738 - 78784 8.2 103 48 Tu 1 . - CDS 78807 - 79148 359 ## COG2913 Small protein A (tmRNA-binding) - Prom 79201 - 79260 3.2 104 49 Op 1 17/0.000 - CDS 79297 - 80958 1537 ## COG0497 ATPase involved in DNA repair - Prom 80983 - 81042 4.7 105 49 Op 2 . - CDS 81044 - 81922 609 ## COG0061 Predicted sugar kinase - Prom 82044 - 82103 4.2 + Prom 81611 - 81670 2.5 106 50 Op 1 . + CDS 81854 - 82048 158 ## UTI89_C2948 hypothetical protein 107 50 Op 2 . + CDS 82045 - 82638 859 ## COG0576 Molecular chaperone GrpE (heat shock protein) + Term 82682 - 82740 23.6 - Term 82648 - 82684 2.1 108 51 Op 1 4/0.467 - CDS 82735 - 83976 1195 ## COG4536 Putative Mg2+ and Co2+ transporter CorB 109 51 Op 2 . - CDS 84042 - 84833 701 ## COG4137 ABC-type uncharacterized transport system, permease component - Prom 84864 - 84923 3.9 + Prom 84884 - 84943 5.2 110 52 Op 1 23/0.000 + CDS 85000 - 86361 1675 ## COG0541 Signal recognition particle GTPase + Term 86371 - 86412 3.1 111 52 Op 2 12/0.067 + CDS 86438 - 86746 524 ## PROTEIN SUPPORTED gi|110806723|ref|YP_690243.1| 30S ribosomal protein S16 112 52 Op 3 30/0.000 + CDS 86765 - 87313 189 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 113 52 Op 4 33/0.000 + CDS 87344 - 88111 598 ## COG0336 tRNA-(guanine-N1)-methyltransferase 114 52 Op 5 . + CDS 88153 - 88500 573 ## PROTEIN SUPPORTED gi|15803128|ref|NP_289159.1| 50S ribosomal protein L19 + Term 88528 - 88567 7.3 115 53 Op 1 6/0.200 - CDS 88577 - 89059 290 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 116 53 Op 2 . - CDS 89075 - 90298 710 ## COG2199 FOG: GGDEF domain 117 53 Op 3 . - CDS 90291 - 90809 194 ## ECS88_2789 hypothetical protein - Prom 90861 - 90920 5.1 118 54 Tu 1 . - CDS 90958 - 91320 317 ## ECUMN_2927 hypothetical protein - Prom 91372 - 91431 4.7 + Prom 91328 - 91387 5.3 119 55 Op 1 7/0.200 + CDS 91533 - 92603 1081 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 120 55 Op 2 . + CDS 92614 - 93735 1188 ## COG0287 Prephenate dehydrogenase + Term 93741 - 93802 15.1 - Term 93728 - 93788 21.7 121 56 Op 1 . - CDS 93800 - 94960 957 ## COG0077 Prephenate dehydratase - Prom 95158 - 95217 8.2 - Term 95157 - 95201 18.1 122 56 Op 2 . - CDS 95252 - 95593 574 ## PROTEIN SUPPORTED gi|15803120|ref|NP_289151.1| translation inhibitor protein RaiA - Prom 95764 - 95823 42.9 - Term 95743 - 95803 15.1 123 57 Tu 1 . - CDS 95828 - 96565 787 ## COG4105 DNA uptake lipoprotein - Prom 96687 - 96746 4.5 + Prom 96586 - 96645 4.8 124 58 Op 1 11/0.067 + CDS 96700 - 97680 1064 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 125 58 Op 2 7/0.200 + CDS 97677 - 98408 550 ## COG1496 Uncharacterized conserved protein + Prom 98428 - 98487 4.7 126 59 Tu 1 . + CDS 98538 - 101111 1841 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 101115 - 101154 4.2 Predicted protein(s) >gi|296918656|gb|GG773044.1| GENE 1 314 - 880 569 188 aa, chain + ## HITS:1 COG:ECs3552 KEGG:ns NR:ns ## COG: ECs3552 COG0637 # Protein_GI_number: 15832806 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 372 100.0 1e-103 MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMIALNGSPTWRIAQAIIE LNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALL AHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGM DAVDVRLL >gi|296918656|gb|GG773044.1| GENE 2 1021 - 1305 260 94 aa, chain + ## HITS:1 COG:yqaA KEGG:ns NR:ns ## COG: yqaA COG1238 # Protein_GI_number: 16130601 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 94 49 142 142 163 100.0 7e-41 MGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLCLLAGWM RISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH >gi|296918656|gb|GG773044.1| GENE 3 1378 - 2934 1760 518 aa, chain + ## HITS:1 COG:gshA KEGG:ns NR:ns ## COG: gshA COG2918 # Protein_GI_number: 16130600 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Escherichia coli K12 # 1 518 1 518 518 1084 100.0 0 MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGHPEALGSALTHKWITTD FAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPLSMPCYIAEGQDIELAQYG TSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFWQAKCGDISGADAKEKISAGY FRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPFEKTECGMYYLPYATSLRLSDLG YTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAKIGIEKDGKRLQINSNVLQIENELY APIRPKRVTRSGESPSDALLRGGIEYIEVRSLDINPFSPIGVDEQQVRFLDLFMVWCALA DAPEMSSSELACTRVNWNRVILEGRKPGLTLGIGCETAQFPLPQVGKDLFRDLKRVAQTL DSINGGEAYQKVCDELVACFDNPDLTFSARILRSMIDTGIGGTGKAFAEAYRNLLREEPL EILREEDFVAEREASERRQQEMEAADTEPFAVWLEKHA >gi|296918656|gb|GG773044.1| GENE 4 3101 - 3616 547 171 aa, chain + ## HITS:1 COG:luxS KEGG:ns NR:ns ## COG: luxS COG1854 # Protein_GI_number: 16130599 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Escherichia coli K12 # 1 171 1 171 171 351 100.0 4e-97 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI >gi|296918656|gb|GG773044.1| GENE 5 3682 - 4794 793 370 aa, chain - ## HITS:1 COG:CAC0753_1 KEGG:ns NR:ns ## COG: CAC0753_1 COG0617 # Protein_GI_number: 15894040 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Clostridium acetobutylicum # 16 225 19 223 228 143 36.0 4e-34 MIWQLTDDKRWSALRQRFSWVEEMHHTPQDPEHHGEGDVGVHTEMVLNALITLPEFQQLP AQQQEVLWAAALLHDVEKRSTTVQENGRIQSPGHARRGELTARQILWRDIPTPFVLREQI VALVRLHGLPLWLLERPEPERLLLTAAMRIDTRLLALLARADLLGRQSPDQQSMLERIDL FELFCHEQQCWGKMRPFVSDSARWHYLTHEQSSPDFVPWEAEPFEVILLCGLPGMGKDRY INEQCQGMDVISLDDMRRRINASPDDKTATGRIVQQAKEEARVFLRQKKPFIWNATNITR QLRSQLISLFTAYGARVKIVYLEVPWAQWKQQNARREYAVPEAVMMRMASRLEVPQLDEA HSVEYRMTDR >gi|296918656|gb|GG773044.1| GENE 6 4791 - 5498 530 235 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2952 NR:ns ## KEGG: ECS88_2952 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 235 1 235 235 476 100.0 1e-133 MNTQRKYGRTWHYPFSPGTTSDDRINADYWQDLQAITQLVHTEKLDGENNCLNRYGVFAR SHAAPTQSAWTYKIRQRWQLLKNDLGDLELFGENLYAVHSIEYRALEQDFYLFAVRCQDM WLSWEEVQFYAALFDFPCVPEISGPQPGNDEKSWQRDFLALTNARGTFDPWDTQTCQPCT LEGIVSRNHDAFSVADFSHNVFKYVRKNHVKTTVHWKRHWQRARMAHEFVYGEQS >gi|296918656|gb|GG773044.1| GENE 7 5756 - 7294 1651 512 aa, chain - ## HITS:1 COG:STM2815 KEGG:ns NR:ns ## COG: STM2815 COG0477 # Protein_GI_number: 16766126 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 502 1 502 512 908 95.0 0 MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGV ANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLI PLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGVA VVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQIMLDRGKELDWFSSQEIIILTVV AVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYG YTATWAGLASAPVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAYTFEPGMD FGASAWPQFIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTM WTNRESLHHAQLTESVNPFNPNAQAMYSQLEGLGMTQQQASGWIAQQITNQGLIISANEI FWMSAGIFLVLLGLVWFAKPPFGAGGGGGGAH >gi|296918656|gb|GG773044.1| GENE 8 7311 - 8483 1217 390 aa, chain - ## HITS:1 COG:emrA KEGG:ns NR:ns ## COG: emrA COG1566 # Protein_GI_number: 16130597 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 390 1 390 390 689 99.0 0 MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVLRHFEETDDAYVAGN QIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMI NSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQ YNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIVSPMTGYVSRRAVQPGAQISPT TPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAF SLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVR STPVAVSTAREISLAPVNKLIDDIVKANAG >gi|296918656|gb|GG773044.1| GENE 9 8610 - 9140 510 176 aa, chain - ## HITS:1 COG:ECs3546 KEGG:ns NR:ns ## COG: ECs3546 COG1846 # Protein_GI_number: 15832800 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 306 100.0 2e-83 MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMA LITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEK GHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS >gi|296918656|gb|GG773044.1| GENE 10 9231 - 9566 343 111 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2948 NR:ns ## KEGG: ECS88_2948 # Name: ygaH # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 111 1 111 111 178 100.0 5e-44 MSYEVLLLGLLVGTANYCFRYLPLRLRVGNARPTKRGAIGILLDTIGIASICALLVVSTA PEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYGLAWKVMAII >gi|296918656|gb|GG773044.1| GENE 11 9556 - 10293 525 245 aa, chain - ## HITS:1 COG:ygaZ KEGG:ns NR:ns ## COG: ygaZ COG1296 # Protein_GI_number: 16130594 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Escherichia coli K12 # 1 245 1 245 245 433 100.0 1e-121 MESPTPQPAPGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLGFSPLESVFFSCIIYAG ASQFVITAMLAAGSSLWIAALTVMAMDVRHVLYGPSLRSRIIQRLQKSKTALWAFGLTDE VFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGAFSGSGLLQGYPAVEAALGFM LPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIPVAILAGIVCGCLTALIQAFWQG APDEL >gi|296918656|gb|GG773044.1| GENE 12 10417 - 11601 1158 394 aa, chain - ## HITS:1 COG:ECs3543 KEGG:ns NR:ns ## COG: ECs3543 COG0477 # Protein_GI_number: 15832797 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 394 1 394 394 620 99.0 1e-177 MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLSASSAGFIVTAAQLGYA AGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMMILGTALTGLFSVVAQILV PLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASMLMALMALA LWRGLPQMKSETHLNYPQLLGSVFSMFISNKILRTRALLGCLTFANFSILWTSMAFLLAA PPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTS VLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAW QHGGWAGVCLAGATIALVNLLVWWRGFHRQEAAN >gi|296918656|gb|GG773044.1| GENE 13 11793 - 12785 1124 330 aa, chain - ## HITS:1 COG:ECs3542 KEGG:ns NR:ns ## COG: ECs3542 COG2113 # Protein_GI_number: 15832796 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 647 99.0 0 MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVN KPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLID KKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAAYGLTNTV THNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNA DTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASE DDIQGHVDGWIKAHQQQFDGWVNEALAAQK >gi|296918656|gb|GG773044.1| GENE 14 12843 - 13907 1292 354 aa, chain - ## HITS:1 COG:ECs3541 KEGG:ns NR:ns ## COG: ECs3541 COG4176 # Protein_GI_number: 15832795 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 354 1 354 354 579 99.0 1e-165 MADQNNPWDTTPAADSAAQSADAWGTPATAPTDGGGADWLTSTPAPNVEHFNILDPFHKT LIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGMPAPVAIIVFALIAWQI SGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKII RPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEA SRSFGANPSQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGR LDMGLATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRWYTTGPVGLLTRPFIK >gi|296918656|gb|GG773044.1| GENE 15 13900 - 15102 1233 400 aa, chain - ## HITS:1 COG:proV KEGG:ns NR:ns ## COG: proV COG4175 # Protein_GI_number: 16130591 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Escherichia coli K12 # 1 400 1 400 400 762 99.0 0 MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIM GLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPH MTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALA INPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQN GEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSAKDIARRTPNGLIRKTPGFGPRSAL KLLQDEDREYGYVIERGNKFVGAVSIDSLKAALTQQQGLDAALIDAPLAVDAQTPLSELL SHVGQAPCAVPVVDEDQQYVGIISKGMLLRALDREGVNNG >gi|296918656|gb|GG773044.1| GENE 16 15458 - 16417 1003 319 aa, chain - ## HITS:1 COG:nrdF KEGG:ns NR:ns ## COG: nrdF COG0208 # Protein_GI_number: 16130590 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Escherichia coli K12 # 1 319 1 319 319 625 98.0 1e-179 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSVVEQQLTMRVF TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA AYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFASRGKLTN TADLIRLIIRDEAVHGYYIGYKYQKNQEKISQAQREELKSFAFDLLLELYDNELQYTDEL YAETPWSDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGS GSSYVMGKAVETEDEDWNF >gi|296918656|gb|GG773044.1| GENE 17 16427 - 18571 2053 714 aa, chain - ## HITS:1 COG:ECs3538 KEGG:ns NR:ns ## COG: ECs3538 COG0209 # Protein_GI_number: 15832792 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 714 1 714 714 1436 98.0 0 MATTTAERLTQETMDYHALNAMLNLYDSAGRIQFDKDSQAVDAFMTTHVRPNSVAFSSQQ QRLNWLVNEGYYDESVLNRYSRDFVITLFAHAHASGFRFQTFLGAWKFYTSYTLKTFDGK RYLEDFADRVTMVALTLAQGDETLATQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA KENAQMALFSPYDVERVYGKPFADVAISEHYDELVADERIRKKYLNARDFFQRLAEIQFE SGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYARTGHDISCNLGSL NIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR EGIAYGSPEALDFTNLYFYTITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQG NWQPKTAKVGELFARSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATS SIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQG LSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL >gi|296918656|gb|GG773044.1| GENE 18 18544 - 18954 234 136 aa, chain - ## HITS:1 COG:ECs3537 KEGG:ns NR:ns ## COG: ECs3537 COG1780 # Protein_GI_number: 15832791 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 267 99.0 4e-72 MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPR QVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCSVPWLYRFELMGTQSDIEN VRKGVTEFWQRQPQNA >gi|296918656|gb|GG773044.1| GENE 19 18951 - 19196 253 81 aa, chain - ## HITS:1 COG:ECs3536 KEGG:ns NR:ns ## COG: ECs3536 COG0695 # Protein_GI_number: 15832790 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Escherichia coli O157:H7 # 1 81 1 81 81 162 98.0 1e-40 MRITIYTRNNCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRAQGFRQLPVVIAGDLS WSGFRPDMINRLHPAPHAASA >gi|296918656|gb|GG773044.1| GENE 20 19405 - 19836 509 143 aa, chain - ## HITS:1 COG:ECs3535 KEGG:ns NR:ns ## COG: ECs3535 COG2128 # Protein_GI_number: 15832789 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 275 98.0 2e-74 MTTLRQPYYELSPAVYNALVQAKTALENSTLDTTLMELVYLRVSQINGCAFCLEMHSKAL RKSGVPQHKLDALAGWRVSHHFDERERAALAWAESVTEIARTHAEDEVYQPLLEHFSAAE ISDLTFAIGLMNCFNRLAVSMRM >gi|296918656|gb|GG773044.1| GENE 21 19924 - 21258 788 444 aa, chain + ## HITS:1 COG:ECs3534 KEGG:ns NR:ns ## COG: ECs3534 COG1167 # Protein_GI_number: 15832788 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 817 92.0 0 MPRYQDIARQLKTAIEQGELKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLIRRG QAGTFVSERIYPQQSTVQVVAFAGESQQPLPFQMGLPALDLFPRELWARVMGRRLRTQTR FDLALGDVCGEAALREAIVDYLRVSRGIDCQPEQVFITHGYAASIALILHALAKPGNGMW IEDPGFPLIRPIVTRHDVEILPVPVDDNGLDITSGIQNYPDARFALITPAHQSPLGVALS LARRHQILEWADRSQAWIIEDDYDSEFRYHGKPLPALKSLDAPQRVIYAGTFSKALFPAL RCAWLVVPVKQIAQFRHQASLAPCAVPVLWQNTLADFLREGHFWRHLKKMRQHYAQRRQW IEQALTQQGFQVVPQKGGIQMVIRMIGDDIAHARKANAAGLAVQALSDWRIRSSGEGGLL LSFTNIVNEGMARQVAQQLRKALS >gi|296918656|gb|GG773044.1| GENE 22 21335 - 21664 236 109 aa, chain - ## HITS:1 COG:ECs3533 KEGG:ns NR:ns ## COG: ECs3533 COG4575 # Protein_GI_number: 15832787 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 109 5 113 113 192 100.0 2e-49 MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRAR MHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS >gi|296918656|gb|GG773044.1| GENE 23 21816 - 22160 353 114 aa, chain + ## HITS:1 COG:no KEGG:G2583_3317 NR:ns ## KEGG: G2583_3317 # Name: ygaC # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 114 1 114 114 221 100.0 9e-57 MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSS TLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVALERYLNGLFGEAS >gi|296918656|gb|GG773044.1| GENE 24 22224 - 22673 383 149 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_2994 NR:ns ## KEGG: ECUMN_2994 # Name: ygaW # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 149 1 149 149 268 100.0 6e-71 MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYSRLVAIPVNILIAWPYG MYRDLFMRAARKVSPSGWIKNLADIMAYVTFQSPVYVAILLVVGADWHQIMAAVSSNIVV SMLMGAVYGYFLDYCRRLFKVSRYQQVKA >gi|296918656|gb|GG773044.1| GENE 25 23341 - 23745 471 134 aa, chain + ## HITS:1 COG:ECs3530 KEGG:ns NR:ns ## COG: ECs3530 COG2916 # Protein_GI_number: 15832784 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 210 98.0 6e-55 MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKIST WLELMKADGINPEELLGDSSAAAPRAGKKRQPRPAKYKFIDVNGETKTWTGQGRTPKPIA QALAEGKSLDDFLI >gi|296918656|gb|GG773044.1| GENE 26 23792 - 24316 424 174 aa, chain - ## HITS:1 COG:ygaP KEGG:ns NR:ns ## COG: ygaP COG0607 # Protein_GI_number: 16130582 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 174 1 174 174 337 98.0 9e-93 MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRREQI IFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIA AGGLILIGVILGYTVNSGFFLLSGFVGAGLLFAGISGFCGMARLLDKMPWNQRA >gi|296918656|gb|GG773044.1| GENE 27 24326 - 24625 318 99 aa, chain - ## HITS:1 COG:ygaV KEGG:ns NR:ns ## COG: ygaV COG0640 # Protein_GI_number: 16130581 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 99 1 99 99 162 100.0 2e-40 MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLA RMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP >gi|296918656|gb|GG773044.1| GENE 28 24808 - 24966 206 52 aa, chain + ## HITS:1 COG:ECs3527 KEGG:ns NR:ns ## COG: ECs3527 COG0401 # Protein_GI_number: 15832781 # Func_class: S Function unknown # Function: Uncharacterized homolog of Blt101 # Organism: Escherichia coli O157:H7 # 1 52 1 52 52 77 100.0 6e-15 MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIHAFWVQTRD >gi|296918656|gb|GG773044.1| GENE 29 25050 - 25499 533 149 aa, chain + ## HITS:1 COG:ygaU KEGG:ns NR:ns ## COG: ygaU COG1652 # Protein_GI_number: 16130579 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Escherichia coli K12 # 1 149 1 149 149 267 100.0 4e-72 MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLNKTGIPDADKVNIQIADGKATVTGD GLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVKSGDTLSAISKQVYGNANL YNKIFEANKPMLKSPDKIYPGQVLRIPEE >gi|296918656|gb|GG773044.1| GENE 30 25500 - 26162 684 220 aa, chain - ## HITS:1 COG:ECs3525 KEGG:ns NR:ns ## COG: ECs3525 COG1802 # Protein_GI_number: 15832779 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 220 7 226 226 409 99.0 1e-114 MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVN QKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDAS EKMLDEWDLRHQAFHTAIVAGCGSYYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKH DQHQTLTATVLARDTARASELMRQHLLTPIPIIQQAMAGN >gi|296918656|gb|GG773044.1| GENE 31 26183 - 27583 1402 466 aa, chain - ## HITS:1 COG:ECs3524 KEGG:ns NR:ns ## COG: ECs3524 COG1113 # Protein_GI_number: 15832778 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 466 1 466 466 822 99.0 0 MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVM IMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSW VPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPY ADVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNS VIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSC LNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVF KFLIDSSGAIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIGFITFVLVV MLFRPAQQLEVLSTGLLAIGIICTVPIMARWKKLIMWQKTPIHNTR >gi|296918656|gb|GG773044.1| GENE 32 27821 - 29101 1377 426 aa, chain - ## HITS:1 COG:ECs3523 KEGG:ns NR:ns ## COG: ECs3523 COG0160 # Protein_GI_number: 15832777 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Escherichia coli O157:H7 # 1 426 1 426 426 840 99.0 0 MSSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHP KVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVK IARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISE DDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYAATPAFMQRLRALCDEHGIMLIADE VQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAG NPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHTEIGDVRGLGAMIAIELF EDGDHSKPDAKLTAEIVARARDKGLILLSCGPYNNVLRILVPLTIEDAQIRQGLEIISQC FAEAKQ >gi|296918656|gb|GG773044.1| GENE 33 29115 - 30563 1878 482 aa, chain - ## HITS:1 COG:ECs3522 KEGG:ns NR:ns ## COG: ECs3522 COG1012 # Protein_GI_number: 15832776 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 482 1 482 482 949 98.0 0 MKLNDSNLFRQQALINGEWLDANNDEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA LPVWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK PASQTPFSALALAELAIRAGVPAGVFNVVTGSAGTVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQNG VYDRFAEKLQQAVSKLHIGNGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA RDLSRVFRVGEALEYGIIGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL >gi|296918656|gb|GG773044.1| GENE 34 30586 - 31854 973 422 aa, chain - ## HITS:1 COG:ECs3521 KEGG:ns NR:ns ## COG: ECs3521 COG0579 # Protein_GI_number: 15832775 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli O157:H7 # 1 422 23 444 444 839 97.0 0 MYDFLIIGGGIIGMSTAMQLIDVYPDARIALLEKEPGPACHQTGHNSGVIHAGVYYTPGS LKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSELEMERMRALWERTAANGIDREWLN AEELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQARGGEIIYNAEVSALSEHKNG VVICTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHL IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRR VLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDF LFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAF NQ >gi|296918656|gb|GG773044.1| GENE 35 31874 - 32851 1080 325 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2923 NR:ns ## KEGG: ECS88_2923 # Name: ygaT # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 325 1 325 325 642 100.0 0 MNALTAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTNRFLEQVAEWPVQALEYK SFLRFRVGKILDDLCANQLQPLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAH LIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMKIDE QNMQGGNSLLLHLDDWEHLDHFFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPV MRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPH PDLRRELMRQRGYFAYATHHYQTHQ >gi|296918656|gb|GG773044.1| GENE 36 33483 - 33719 130 78 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2921 NR:ns ## KEGG: ECS88_2921 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 78 10 87 87 145 100.0 5e-34 MVIAMSFLYDGFIDYLLFIVGYEDWDITVKDTCKIRKIVNVEKIINYIKLVIFGLGFNSR QPIMIGRCKDYTNKNRKL >gi|296918656|gb|GG773044.1| GENE 37 33712 - 34623 247 303 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C3012 NR:ns ## KEGG: UTI89_C3012 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 303 1 303 303 630 100.0 1e-179 MTILVPPSKFCIYSDDSRAGTLNFINSIESIGVKNKGRVIVDLSKVKFASAAASVLFFAI VNRAQFLTRDPNFIRFKWPKKDDNPSGHRWIVGTGLARALLAGTEEKLNALTREERYFQS AVEPYEHIVETVLMLQKSALLNNEQLGLLLTAISEALLNVSHHAYEDEGFESDIQLLKGK RWWQCAWFNRDENKVVFIVCDLGLGIYRSFVPNGDGHSIQNEVSSVERAMLVGESRFVGS GRGNGSEDIKRPIGAGCEDNETLLILTGRARYSYNSNDSSPRCEKLAEYIPGTLLQWSLV PRR >gi|296918656|gb|GG773044.1| GENE 38 34730 - 34954 218 74 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2919 NR:ns ## KEGG: ECS88_2919 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 74 35 108 108 137 98.0 2e-31 MPALKGTEQEIVVDFRGIALGVGSSFLEEAFGGLIRKEGIPKANVKARLIIKSDVPFYKE QIDKFIDLAQPERV >gi|296918656|gb|GG773044.1| GENE 39 35574 - 35870 98 98 aa, chain - ## HITS:1 COG:STM1005 KEGG:ns NR:ns ## COG: STM1005 COG0582 # Protein_GI_number: 16764365 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 25 98 343 416 430 72 43.0 2e-13 MKDATVFEDPKTNKPWASADAIRKKAWVPTLRKAGIRYRNPYQTRHTFATSHISRGANLF WLAAQMGHKGPEMLFRHYGQYLKEYDGRASIKDKKALF >gi|296918656|gb|GG773044.1| GENE 40 36707 - 36913 124 68 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2916 NR:ns ## KEGG: ECS88_2916 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 68 14 81 81 130 100.0 1e-29 MLNLDCVPISTYCKETGETPEAINKRVQRGVWREGVQVLKVEGVKERWIDLSEVAKWARQ NCSNYRAA >gi|296918656|gb|GG773044.1| GENE 41 36955 - 37074 70 39 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2915 NR:ns ## KEGG: ECS88_2915 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 39 258 296 296 66 100.0 4e-10 MLSFFFVYVFYVGFVKFYRRYTLEVLMAFAVLQSNDTIR >gi|296918656|gb|GG773044.1| GENE 42 37930 - 38454 417 174 aa, chain - ## HITS:1 COG:yfdR KEGG:ns NR:ns ## COG: yfdR COG1896 # Protein_GI_number: 16130293 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Escherichia coli K12 # 1 173 10 182 187 349 95.0 2e-96 MSFIKTFSGKHFYYDRINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQ EFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADL IMLATERRDLGLDDGSFWPVLEGIPATEMFKVIPLSPGHTYGMFMERFKELTES >gi|296918656|gb|GG773044.1| GENE 43 38582 - 39406 836 274 aa, chain - ## HITS:1 COG:yfdQ KEGG:ns NR:ns ## COG: yfdQ COG5532 # Protein_GI_number: 16130292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 274 1 274 274 500 99.0 1e-141 MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALS TASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFS ALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAVRKITIEANQTADFED NDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQ LEAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA >gi|296918656|gb|GG773044.1| GENE 44 39472 - 39834 504 120 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2911 NR:ns ## KEGG: ECS88_2911 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 120 107 226 226 238 100.0 6e-62 MASERSTNVQEFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRVK IKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH >gi|296918656|gb|GG773044.1| GENE 45 40303 - 40815 228 170 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2910 NR:ns ## KEGG: ECS88_2910 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 170 1 170 170 326 100.0 2e-88 MGAIYVKRLILSVALIIPIASNASDALNQPSSSLNDGVETFFISCFDMPQETTTDMDACQ RVQLAQVSWVKNKYSVAALNRLKQDNKDDPQRLQELTASFNAESEAWTELIEKASKSVQV DYAGGTIAGTAVASRQIGLLELQSHDIWEHWLRFEDSTPPLLPEPKFKSE >gi|296918656|gb|GG773044.1| GENE 46 41018 - 41575 197 185 aa, chain - ## HITS:1 COG:ymfK KEGG:ns NR:ns ## COG: ymfK COG1974 # Protein_GI_number: 16129108 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli K12 # 1 185 40 224 224 390 100.0 1e-109 MGDGATKNIGDSMARHIEKCFDLPVGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQ AGAWKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACH GDDVIALMHDTGETTFKRLIEDGTQRYLKALNPNWPEPYIKINGNCSIIGTVIFSGKPRR YKIKA >gi|296918656|gb|GG773044.1| GENE 47 41783 - 41983 212 66 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2907 NR:ns ## KEGG: ECS88_2907 # Name: not_defined # Def: DNA-binding transcriptional regulator # Organism: E.coli_S88 # Pathway: not_defined # 1 66 102 167 167 138 100.0 6e-32 MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQCTSGAITKSDLRP DIYPKD >gi|296918656|gb|GG773044.1| GENE 48 42027 - 42578 277 183 aa, chain + ## HITS:1 COG:no KEGG:c3195 NR:ns ## KEGG: c3195 # Name: ymfL # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 183 20 202 202 367 97.0 1e-100 MGKHHWKIEKQPEWYVKAVRKTIAALPGGYAEAADWLDVTENALFNRLRADGDQIFPLGW AMVLQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQRLLEVIEQIGSYSKQIRSA IEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCVSESSDARECAAPGAVACRDCGE TNA >gi|296918656|gb|GG773044.1| GENE 49 42575 - 42913 70 112 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0870 NR:ns ## KEGG: ECUMN_0870 # Name: ymfM # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 112 1 112 112 216 100.0 2e-55 MNSLTTHYRRSQLIALPVPGGKAKVEYCYAVNVPGDREIVTHSFAEWAVGDFNRQKETVL CDKLTAGSKITTECPSESFVGNRKHNGLSTSAKAMSMNASVRSNSFVVNSGK >gi|296918656|gb|GG773044.1| GENE 50 42754 - 42933 134 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|324112042|gb|EGC06020.1| ## NR: gi|324112042|gb|EGC06020.1| hypothetical protein ERIG_03010 [Escherichia fergusonii B253] # 1 59 15 73 73 107 98.0 3e-22 MRQVNRWFKDHYGVPVRVIRWEPETQRVIYLREGYEHECFSPLEQFRRKFREIEVGHEH >gi|296918656|gb|GG773044.1| GENE 51 42923 - 43390 217 155 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2903 NR:ns ## KEGG: ECS88_2903 # Name: not_defined # Def: phage replication protein O # Organism: E.coli_S88 # Pathway: not_defined # 1 155 1 155 313 278 100.0 5e-74 MSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTA IARLEAEGWLTRKARRQGNRNASNVYQLNVAKLQAAAFSQLSDSDPSKSDASKSAPSKFD ASKSGKKAGFHPSESGGDPSVKSKHDPSDKKTSRP >gi|296918656|gb|GG773044.1| GENE 52 43540 - 43908 291 122 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2903 NR:ns ## KEGG: ECS88_2903 # Name: not_defined # Def: phage replication protein O # Organism: E.coli_S88 # Pathway: not_defined # 1 122 192 313 313 249 99.0 4e-65 MTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSR VSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGF RG >gi|296918656|gb|GG773044.1| GENE 53 43911 - 44399 123 162 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2902 NR:ns ## KEGG: ECS88_2902 # Name: yfdN # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 162 3 164 164 294 100.0 9e-79 MSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTRRHFP RLTERAQEPEPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAF RESHSQPERNNFLARRERCLRKSSKRAASGEEWYLSGNYVGA >gi|296918656|gb|GG773044.1| GENE 54 44399 - 45052 643 217 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2901 NR:ns ## KEGG: ECS88_2901 # Name: dam # Def: AdoMet-dependent methyltransferase # Organism: E.coli_S88 # Pathway: not_defined # 1 217 12 228 228 448 100.0 1e-125 MSNKYCQALVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGGNAKCAAY YTAEDNALAHDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKHASAMRDKGGRY VFLIKAATSEVWWPEDADHIAFIRGRIGFELPVWFIPKDEKQVPTGAFFAGAIAVFDKTW KGPAISYIGRDELEACGEAFLAQVRQQAEKLLREMAA >gi|296918656|gb|GG773044.1| GENE 55 45049 - 45375 171 108 aa, chain + ## HITS:1 COG:HI0749 KEGG:ns NR:ns ## COG: HI0749 COG1974 # Protein_GI_number: 16272690 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Haemophilus influenzae # 1 90 3 92 209 69 40.0 1e-12 MTTLTQCQQQVLDMLISYQKERGFPPTNQEVATMLGYRSVNAAVEHLRALEKKGVITIKR GVARGITLHTAVKDDDSEAVGIIRSLLAGKENARLRAAHWLHERGLKV >gi|296918656|gb|GG773044.1| GENE 56 45372 - 45761 402 129 aa, chain + ## HITS:1 COG:ECs2751 KEGG:ns NR:ns ## COG: ECs2751 COG4570 # Protein_GI_number: 15832005 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 122 3 117 119 87 40.0 8e-18 MKLILPFPPSVNTYWRHPNKGAFAGKSLISAAGRKFQSAACAAIVEQLRRLPKPTSAPAS VEIVLFPPDNRIRDLDNYNKALFDALTHAGVWEDDSQVKRMLVEWGPVIPEGKVEITISK YEKTAGAAA >gi|296918656|gb|GG773044.1| GENE 57 45781 - 46578 680 265 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2898 NR:ns ## KEGG: ECS88_2898 # Name: not_defined # Def: KilA protein; KilA-N domain # Organism: E.coli_S88 # Pathway: not_defined # 1 265 1 265 265 550 100.0 1e-155 MNNLMVIDGIEVRRDAYGRYSLNDLHRAAGSLDKHKPAFWLRNEQTERLISELQICNSVN IEPVNVIRGGNNQGTYVCKELVYAYAMWISPSFHLKVIRTFDMVTSTPEKLSGQAADKMQ AGVILLDFMRRELNLSNSSVLGACQKLQEAVGLPNLAPRYAIDAPADAPDGSSRPTLSLS ALLKQYGIRLTANQAYHQMAKLGIVEQRERYSRTAINNIKKFWSLTAKGCMFGKNITSPA NPRETQPHFFESRFPELLKLLDTVH >gi|296918656|gb|GG773044.1| GENE 58 46670 - 47575 457 301 aa, chain + ## HITS:1 COG:no KEGG:APECO1_3882 NR:ns ## KEGG: APECO1_3882 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 301 17 317 317 614 99.0 1e-174 MQGRVLLEPEPERYSSFASGAVPAASQPLADDPAIRAVFRNEAVIRRAGGVECLESWLLR EKGCQWPHSGWHSENMTTMRHAPGAIRLCWHCDNLLRDQFTERLESMATDNCARWVLSVV RRDLGFDDSHVVTMPELCWWLVRNDLADALPESAARKALRLPKPVVPSVTRESDLVPSVP ATSIIQDKAKKVLALKVDPESPESFMLRPKCRRWVNEKYTRWVKTQSCACCGKPADDPHH LIGHGQGGMGTKAHDLFVLPLCRKHHDELHADTVAFEEMYGSQLELIFRFIDRALAIGVL V >gi|296918656|gb|GG773044.1| GENE 59 47589 - 48341 188 250 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2896 NR:ns ## KEGG: ECS88_2896 # Name: ydfT # Def: antitermination protein Q; Qin prophage # Organism: E.coli_S88 # Pathway: not_defined # 1 250 1 250 250 521 100.0 1e-146 MNLEALPKYYSPKSPKLSDDASATGSGGLTITDVMAAQGMVQSKAPLGFALFLAKVGVQD PQFAIEGLLNYAMALDNPTLNKLSEETRLQIIPYLVNFAFADYSRSAASKARCEHCTGTG FHNVLREVVKHSRSGESVIKEEWVKELCQHCHGKGEVSTACRGCKGKGIVLDEKRTRLHG TPVYKTCGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQWYKGYADVIDKLVTKCWQEEAY AETQLRKVTR >gi|296918656|gb|GG773044.1| GENE 60 48527 - 48862 279 111 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2895 NR:ns ## KEGG: ECS88_2895 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 111 1 111 111 188 100.0 8e-47 MINAVEYRLPLGNISPENLDALSELIVKHSDKFNNYVLSSISDDDIRYSYDYYNFEITEI DEYGFHFIAPYSYYEGCVDNNFSGEVEGYAEYEIIDNELVFSLEELPWDVK >gi|296918656|gb|GG773044.1| GENE 61 48915 - 49319 260 134 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2894 NR:ns ## KEGG: ECS88_2894 # Name: not_defined # Def: holin protein # Organism: E.coli_S88 # Pathway: not_defined # 1 134 1 134 134 246 100.0 2e-64 MPDELECNFRINNKSTYHFTLRFSVGGETAAIHMHEKENLAGAFWLVLLIIAGWGGLVRY LIDVKQSKATWSWINALAQIVVSGFTGVIGGLISIESGFSIYMILATAGISGAMGSVALT YFWERLTGVKNAKS >gi|296918656|gb|GG773044.1| GENE 62 49306 - 49782 485 158 aa, chain + ## HITS:1 COG:ECs1622 KEGG:ns NR:ns ## COG: ECs1622 COG4678 # Protein_GI_number: 15830876 # Func_class: G Carbohydrate transport and metabolism # Function: Muramidase (phage lambda lysozyme) # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 308 94.0 3e-84 MQNLNPQRKAFLDMVAWSEGTDNGLQPTRNHGYDVIVGGEIFTDYSDHPRRLVTLNPKLK STAAGRYQLLSRWWDAYRKQLGLKDFSPKSQDAVALQQIKERGALPMIDRGDIRQAIDRC SNIWASLPGAGYGQFEHKADSLIAKFKEAGGTVKEIQV >gi|296918656|gb|GG773044.1| GENE 63 49978 - 50163 141 61 aa, chain + ## HITS:1 COG:no KEGG:ECO26_0865 NR:ns ## KEGG: ECO26_0865 # Name: not_defined # Def: putative lipoprotein Rz1 precursor # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 61 1 61 61 92 93.0 7e-18 MLMRLSKVFVLMFLLGISACKSPPPVQSQRPEPAAWAMEKALDLQQMLNSIITVSEVEST R >gi|296918656|gb|GG773044.1| GENE 64 50290 - 50538 261 82 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C2988 NR:ns ## KEGG: UTI89_C2988 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 82 1 82 82 155 100.0 4e-37 MNLAKDMIMRIKPQDFKFDVLTVAGYANPKAKTHFAPSASGFNFKWEWEGKIYELHIEQE KLQYPDFILERLFDAAIEMAKK >gi|296918656|gb|GG773044.1| GENE 65 50645 - 51085 264 146 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2890 NR:ns ## KEGG: ECS88_2890 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 146 22 167 167 261 100.0 6e-69 MSIPSLDVHKVVKCAEHKKALDAISLKLKNNIIDSSSEYDFLGDTIIFNKDKKNRLTLKL STYELELIFKETLLVIDEAPVLKFAAIDPTDENNNELIDLFLSKGGFIYIREYKSEPHYE YGDTSLFLHILDATLKELKSANKISY >gi|296918656|gb|GG773044.1| GENE 66 51188 - 51538 181 116 aa, chain + ## HITS:1 COG:RSc1680 KEGG:ns NR:ns ## COG: RSc1680 COG1403 # Protein_GI_number: 17546399 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Ralstonia solanacearum # 1 113 1 115 124 63 40.0 1e-10 MPPRTPKACRVRGCRQTTTDPSGYCESHKSEGWKQYKPGQSRHQRGYGSKWDVIRARVLK RDKGLCQLCLHVGVVREAKTVDHIIPKAHGGTDADCNLQSLCWPCHKAKTARERLK >gi|296918656|gb|GG773044.1| GENE 67 51664 - 52158 490 164 aa, chain + ## HITS:1 COG:ECs1597 KEGG:ns NR:ns ## COG: ECs1597 COG3747 # Protein_GI_number: 15830851 # Func_class: L Replication, recombination and repair # Function: Phage terminase, small subunit # Organism: Escherichia coli O157:H7 # 44 144 4 103 118 65 35.0 4e-11 MAGTAGRSGRRPKPTARKALAGNPGKRALNKDEPVFTPIKGVEPPEWFAEEDLPLATIMW QLTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAIQGNTITGAMGGRVKNPELTA KKEQESEMSSTGAMLGLDPSSRQRLIGLAGQKKATNPFLKIIES >gi|296918656|gb|GG773044.1| GENE 68 52155 - 53888 1286 577 aa, chain + ## HITS:1 COG:ymfN_2 KEGG:ns NR:ns ## COG: ymfN_2 COG4626 # Protein_GI_number: 16129112 # Func_class: R General function prediction only # Function: Phage terminase-like protein, large subunit # Organism: Escherichia coli K12 # 201 577 1 377 377 792 99.0 0 MSRKSYPNVNAANQYARDVVRGKIVACQFVIQACQRHLDDLMAEKSKSFRYRFDKDLAER AAKFIQLLPHTKGEWAFKRMPITLEPWQLFVICCAFGWVNKGSRLRRFREVYTEIPRKNG KSAISAGVALYCFACDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPMLTEAFGIEVNA SNMNRPEDGARFEPLIGNPGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAI TTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVS VYREFLLSQQQRAKNNARLANVFKTKHLNIWVSARSAYFNLVSWQSCEDKSLTLEQFEGQ PCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWVPYDTVYSVEKNEDRRTAERF QKWVEMGVLTVTDGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPI TIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPVKEQAE NKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL >gi|296918656|gb|GG773044.1| GENE 69 53906 - 54082 294 58 aa, chain + ## HITS:1 COG:no KEGG:SPAB_02166 NR:ns ## KEGG: SPAB_02166 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 1 58 3 60 60 73 96.0 2e-12 MLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQLSVGGGK >gi|296918656|gb|GG773044.1| GENE 70 54082 - 55323 1127 413 aa, chain + ## HITS:1 COG:ymfO KEGG:ns NR:ns ## COG: ymfO COG4695 # Protein_GI_number: 16129114 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli K12 # 1 139 1 139 157 291 97.0 1e-78 MFFSGLFQRKSDAPVTTPAELAEAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVG MLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKA FGEVAELLPVDPGCVVPKLNSSWEPVYQVTFSDGSTDVLSQEDIWHVRTLTLDGLVGLNP IAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNA HRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEEL GLGFINYSLVPYLTRIEQRINTGLVRKSKQGVYYAKFNAGALLRGDMKSRFEAYATGINW GIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS >gi|296918656|gb|GG773044.1| GENE 71 55301 - 55951 647 216 aa, chain + ## HITS:1 COG:AGc1747 KEGG:ns NR:ns ## COG: AGc1747 COG3740 # Protein_GI_number: 15888296 # Func_class: R General function prediction only # Function: Phage head maturation protease # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 11 159 17 162 190 94 40.0 1e-19 MQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVMSGAFAASLRAWSDRKALPAL LWQHRMDEPIGVYTEMKEDDVGLYVRGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKD WEYDRSKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIERVLRDVGL SRTQAKAFMAGGYGALSLRDAEDVGSALNALKNLNF >gi|296918656|gb|GG773044.1| GENE 72 55966 - 57171 1666 401 aa, chain + ## HITS:1 COG:mlr8524 KEGG:ns NR:ns ## COG: mlr8524 COG4653 # Protein_GI_number: 13477032 # Func_class: R General function prediction only # Function: Predicted phage phi-C31 gp36 major capsid-like protein # Organism: Mesorhizobium loti # 3 397 63 464 467 270 37.0 3e-72 MAVDIKDVEQVAQELQQKFDDFKAKNDKRVDAIEQEKGKLAGQVETLNGKLSELENLKSD LEKELLELKRPAGGAQNKLATEHKEAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVP EALDRNILTLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDARSQTATSKLG LIEPFMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKPKGFL AYESTDETDKVRAFGKLQHIVSGEATAVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFAI RLLKDSEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRI GTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA >gi|296918656|gb|GG773044.1| GENE 73 57271 - 57471 258 66 aa, chain + ## HITS:1 COG:no KEGG:EFER_0607 NR:ns ## KEGG: EFER_0607 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 66 1 66 66 93 93.0 3e-18 MILKQDLKWSPDGMRVEVIRAGEYDDGALPARVQEIALQAGLAERGISAKSSKAAKEKKA TTSKEG >gi|296918656|gb|GG773044.1| GENE 74 57474 - 57797 353 107 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0895 NR:ns ## KEGG: ECUMN_0895 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 107 1 107 107 204 100.0 9e-52 MLLTMEEIKAQLRLDEDFDADDRHLQLLACAAQKRTETYLNRKLYAPDETIPDSDPDGLH LPDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPYRYFPQ >gi|296918656|gb|GG773044.1| GENE 75 57794 - 58204 283 136 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2880 NR:ns ## KEGG: ECS88_2880 # Name: not_defined # Def: phage head-tail adaptor # Organism: E.coli_S88 # Pathway: not_defined # 1 136 1 136 136 275 100.0 3e-73 MKIRQAQTSATYILPDPGELNKRVLIRLRVDMPADNFGVEPQYLITFRTWAKVIQTSATT WQETAQTGDAITHYITIRYRRGITADYEVVCGDSVYRVKRQRDLNGARRFLLLECTELGE CRQSHGGNNDDFLFAR >gi|296918656|gb|GG773044.1| GENE 76 58179 - 58685 293 168 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2879 NR:ns ## KEGG: ECS88_2879 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 168 1 168 168 251 100.0 7e-66 MTTSFLHVDFQQPAEMRFNRARVRRAFVTIGQRHMRDARRLVMRRARSAPGENPGYQTGR LARSIGYMVPRASKHRPGFMARIAPNQRNGEGNRRITGDFYPAFLFYGVRRGAKRRRSHH RGASGGSGWRLAPRNNFMVETLEKNRSWTRYFLARELRKSLKPERRRR >gi|296918656|gb|GG773044.1| GENE 77 58682 - 59242 549 186 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2878 NR:ns ## KEGG: ECS88_2878 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 186 1 186 186 375 100.0 1e-103 MKLTPVIAALRARCPYFENRVAGAAQFKNLPEVGKLRLPAAYVVPGDDSPGENKSQTDYW QELKEGFSVVVILSNGRDERGQFASYDVVDDVRQMLFKALLGWNPEACGNPITYDGGTLL DLNRHELIYQFDFSVIRELTEDDTRQQDDLNSLDELRTLAIDVDYLDPGNGSDGDIEHHT EIPLPS >gi|296918656|gb|GG773044.1| GENE 78 59251 - 59421 92 56 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0899 NR:ns ## KEGG: ECUMN_0899 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 56 1 56 56 93 100.0 2e-18 MFVKPVKGRSVPDPARGDLLPAEGRNVDENNYWLRREAAGDIRRVNKKVNTDDDKL >gi|296918656|gb|GG773044.1| GENE 79 59405 - 60901 1456 498 aa, chain + ## HITS:1 COG:YPO1242 KEGG:ns NR:ns ## COG: YPO1242 COG4386 # Protein_GI_number: 16121528 # Func_class: R General function prediction only # Function: Mu-like prophage tail sheath protein gpL # Organism: Yersinia pestis # 1 492 1 499 502 361 41.0 2e-99 MTISFNTIPSNTLVPLFYAEMDNQAANTAQDSGASLLIGHANNGAEIVANSLVLMPSADY ARQICGAGSQLARMVEAYRQTDPFGELYVIAVPESTGAAATVTLTVTGAATETGTVNVYV GRTRVQVPVTNGDNVTMIASSIQDAINAVPTLPFTASSSAGVVTLTARHKGLCGNEIPVS LNYYGFGGGEVLPAGVQIAVVTGTAGTGAPVLTGAVAAMADEPFDYIGLPFNDTASVNTL VTEMNDTSGRWSYARQLYGHVYTAKTSTLSELVTAGDQFNQQHITLAGYEKDTQTPADEL AASRTARAAVFIRNDPARPTQTGELVGMLPAPKGKRFTMTEQKTLLSHGVATAYVESGVL RIQRDVTTYRKNAYGVADNSYLDSETLHTSAYVLRKLKSVITSKYGRHKLASDGTRFGPG QAIVTPAVIKGELLATYRQLERAGIVENYELFKQYLVVERDASDPNRLNTLFPPDYVNQL RVFAVVNQFRLQYSEESA >gi|296918656|gb|GG773044.1| GENE 80 60901 - 61257 426 118 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2875 NR:ns ## KEGG: ECS88_2875 # Name: not_defined # Def: phage tail protein # Organism: E.coli_S88 # Pathway: not_defined # 1 118 1 118 118 237 100.0 1e-61 MARIGGTCYFKIDGQQLSLTGGIEVPMNRTVNDDIIGLDGSVDRKETHRAPYVKGTFKVP KNFPVSKITSSDEMTITAELANGQVYVLSSAWLHGEANHNAEEGTVDLEFHGEEGDYQ >gi|296918656|gb|GG773044.1| GENE 81 61257 - 61526 273 89 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2874 NR:ns ## KEGG: ECS88_2874 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 89 1 89 89 173 100.0 2e-42 MKELELKKPITAHGETLSVLEFDEPTGKDVRELGYPYQMNQDESVRLLAHVVSKYIVRLA KVPQNSVDQMSPADLNAAAWLVAGFFLQA >gi|296918656|gb|GG773044.1| GENE 82 61668 - 63503 1709 611 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2872 NR:ns ## KEGG: ECS88_2872 # Name: not_defined # Def: phage tail tape measure protein # Organism: E.coli_S88 # Pathway: not_defined # 1 611 1 611 611 1123 100.0 0 MAEFELKALITGVDRLSPALSKMQKKIRGFKRQAEEASQGGLALGGGLAAGLTLSLKSYA DQENAATGLKVAMMDANGEVGKRFQDINKLAIGLGNQLPGTTADFQNMMQMLVRQGIPAE NILGGVGKATAYLAVQLKKTPEAAAEFAAKMQDATGTASEDMMGLFDTIQKAFYLGVDDT NMLSFFTKTSSVLKMVNKDGLQAAQSLAPISVMMDQMGMNGESAGNALRKVIQSGLSVKK IRDVNKVMARQKLGVQLDFTDGKGSFGGLDNMFRQLAKLRKLTDVKRTGVLKAIFGDDAE TLQVVNALIDKGKDGYDQIQQKMNKQASLNKRVQAQLGTLSNLWEAMTGTATNGLAAIGG AFSGDAKNITQWLGELGEKFTKFADENPRVIRGVVGLAAGLAILKLGLMGVGGAISIVSR IMSMTPIGMIATAIALAAGLIITNWDVVGPYFKKLWETIGPYFEAGRELLKKVFAWSPLG MVINNWGPVVKWFQDMWDKLKPIIEWFTDSSGDTVDAINSAQWGAGAYDAYGTGIPARGY TPYQAVDPAQSNNASGATGPNPFMINKASAPKVDGEIKVSFVNSPPGMRVMETRSSGFDV SHDVGYTRFGR >gi|296918656|gb|GG773044.1| GENE 83 63549 - 64892 817 447 aa, chain + ## HITS:1 COG:HI1515 KEGG:ns NR:ns ## COG: HI1515 COG4228 # Protein_GI_number: 16273417 # Func_class: R General function prediction only # Function: Mu-like prophage DNA circulation protein # Organism: Haemophilus influenzae # 15 436 9 444 455 130 29.0 8e-30 MYGVYMTWKDRLQDASFRGVPFKVEEESAGTGRRVETHEYPNRDKPYTEDLGKITFRPSI TAYVVGDDCFDQRDRLIDALNKPGPGTLVHPTYGELKVCVDGEVRVSTSKSEGRIVRFDL KFVEAGELSYPTSGAATAQTLMSSCSALDDCISDSFSGFSIDGVADFVQNDVVGNASTML GYVSDAMKVVDSAVSDAARLLQGDISVLLPPPSSGKNFVEQVQKMWRTGKRLYGNASDLV TMIKTLSGVSLGSDLQPRGVWKTDSKTTATATQQRNVVASTLRTTAISEAAYAVTRLPAP TTSAVMQNATVGQSTTPAQSTGWPSVTHPALNNAPAVKNTVDLPTWEELTDIRDTLNTAI DKELSRTTSDVLFLALRRVKADLNADINTRLEQSARIIQRTPDEVLPALVLAATWFDNAA RDADIIRRNAITHPGFVPVIPLKVPVQ >gi|296918656|gb|GG773044.1| GENE 84 64889 - 65968 873 359 aa, chain + ## HITS:1 COG:ECs4984 KEGG:ns NR:ns ## COG: ECs4984 COG4379 # Protein_GI_number: 15834238 # Func_class: R General function prediction only # Function: Mu-like prophage tail protein gpP # Organism: Escherichia coli O157:H7 # 1 345 1 346 374 136 31.0 7e-32 MNDNVTLRVNGREWNGWTSVRIGAGIERLARDFSVEITRQWPGDEGITTLQPRIKNGSKV EVLIGDELVITGWVEATPVRYDARSVSTGIAGRSLTADLIDCAAEPTQFNGRSLVQIAQA LAAPFGIEVVNNGAPSGVIPDVQPDHGETVIEVINKILGQQQALAYDDPHGRLVIGGIGS TRAHTALVLGENILSCDTEKSIRERFSVYQVAGQRAGNDDDFGEATTSALRARTEDAFIA RYRPMYIRQTGQATGAGCIARADFEARQRAARTDETTYVVQGWRQGNGTLWQPNQRVIVF DPVCGFDNTELLVSEVTFTQDQNGTLTEIRVGPPDAYLPEPEAPGARKKKKARVQEDPF >gi|296918656|gb|GG773044.1| GENE 85 65968 - 66516 525 182 aa, chain + ## HITS:1 COG:YPO1248 KEGG:ns NR:ns ## COG: YPO1248 COG4384 # Protein_GI_number: 16121534 # Func_class: S Function unknown # Function: Mu-like prophage protein gp45 # Organism: Yersinia pestis # 4 173 8 186 198 80 30.0 1e-15 MSTIEAMQRQLLGLIGRAVVKSISAATKCQTVDVSLIAGEPKAGVEHLEPYGFTARANSG AEAVVLFPDGDRSHAVVVTVSDRRYRLKGLQTGEVAVYDDQGQSVTLTREGIVVDGAGKT ITFRNAPEARFEMDLEVTGQVKDLCDSSGTTMSAMRLAYNGHRHRENGQGSNTDKPDKAM EA >gi|296918656|gb|GG773044.1| GENE 86 66516 - 66941 409 141 aa, chain + ## HITS:1 COG:YPO1249 KEGG:ns NR:ns ## COG: YPO1249 COG4381 # Protein_GI_number: 16121535 # Func_class: S Function unknown # Function: Mu-like prophage protein gp46 # Organism: Yersinia pestis # 19 102 29 111 151 63 46.0 1e-10 MELWLTVNGKRTCASAPLDPLTRAVVISLFTWRRAEPDDNADVPMGWWGDTWPAVQNDRY GSRLWLLQRSKLTNQLVQTVRGYIRECLQWMIDDGVVSRIDLDILRTGINELGNSITLWR RDGPVMISLDDLWSAITHGGQ >gi|296918656|gb|GG773044.1| GENE 87 66928 - 67380 133 150 aa, chain + ## HITS:1 COG:ymfP KEGG:ns NR:ns ## COG: ymfP COG3299 # Protein_GI_number: 16129115 # Func_class: S Function unknown # Function: Uncharacterized homolog of phage Mu protein gp47 # Organism: Escherichia coli K12 # 92 143 3 54 263 99 92.0 3e-21 MADSEFQRPTLAENISMLRNDLFARLDVSDTLRRMDEDVRAKVYAAALHTVYGYIDYLAM NMLPDLCDESWLARHAAMKRCPRKGATTASGYMRWEGVSDGLKVTAGSVIQRDDLIQYTA TADATSAGGVLRVPIACSSAGAVPPPRRGR >gi|296918656|gb|GG773044.1| GENE 88 67295 - 68005 413 236 aa, chain + ## HITS:1 COG:ymfP KEGG:ns NR:ns ## COG: ymfP COG3299 # Protein_GI_number: 16129115 # Func_class: S Function unknown # Function: Uncharacterized homolog of phage Mu protein gp47 # Organism: Escherichia coli K12 # 25 235 52 262 263 398 97.0 1e-111 MQPAPVVSCACRSPAQVQARSPPPGAVGNADDGTSLILVTPVNGLPSSGVADTLTGGFDT EELETWRARVIERYYWTPQGGADGDYVVWAKELPGITRAWAYRHWMGTGTVGVMIASSDL INPIPEESTETAARQHIGPLAPVAGSDLYVFRPVAHTVDFHIRVTPDTPEIRAAITAELR SFLLRDGYPQGELKVSRISEAISGANGEYSHQLLAPAENISIAKNELAVLGTISWA >gi|296918656|gb|GG773044.1| GENE 89 67996 - 68613 254 205 aa, chain + ## HITS:1 COG:ymfQ KEGG:ns NR:ns ## COG: ymfQ COG3778 # Protein_GI_number: 16129116 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 205 1 194 194 369 92.0 1e-102 MGVTNDDYIRLLSALLPPGPAWSASDPAIAGAAQSLTRVHQRADALMRELDPRTTTELIN RWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYD KSTFTCSSACTDAVNAPEWRYYWQGNKPPPRYYWQVNMPAATNSTWMTCGDPCDSALRIW GDTVVECVLNKLCPSHTYVIFKYPE >gi|296918656|gb|GG773044.1| GENE 90 68617 - 69360 439 247 aa, chain + ## HITS:1 COG:RSc1921 KEGG:ns NR:ns ## COG: RSc1921 COG5301 # Protein_GI_number: 17546640 # Func_class: R General function prediction only # Function: Phage-related tail fibre protein # Organism: Ralstonia solanacearum # 116 240 409 548 554 63 35.0 4e-10 MHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDEYFDMLQEELCSVVEASGASLEK ARHDQLLTALRALLLSRKNPFSDIKSDGTVKTALENLGLGEGSALPVGVPVPWPSATPPT GWLKCNGAAFSAEEYPELAKAYPTNKLPDLRGEFIRGWDDGRGVDSRRAVLSTQEPTVGT FYVELAIISGTLSGSGAKFTDSVGIGSTSSNITVSNGNDQSVSGTVAVNPVDTRPRNIAF NYIVRAA >gi|296918656|gb|GG773044.1| GENE 91 69360 - 69962 458 200 aa, chain + ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 58 198 105 244 247 84 34.0 2e-16 MDKAILNSGLVATKAGDITVYNYDGETREYISTSSEYLAVGVGIPAYSCLDAPGIHKAGY AICRSVNLNSWEYVPDHRGEIVYNTETGESKQITAPGDYPENTTTIAPLTPYDKWDGEKW VTDTEAQHSAAVDAAEAQRQSLIDAAMASIGLIQLKLQAGRKLMQAETTRLNAVLDYIDA VTATNTSTAPDVIWPELPEA >gi|296918656|gb|GG773044.1| GENE 92 69934 - 70377 245 147 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2863 NR:ns ## KEGG: ECS88_2863 # Name: not_defined # Def: tail fibre assembly protein # Organism: E.coli_S88 # Pathway: not_defined # 1 147 1 147 147 283 100.0 2e-75 MNSVFFSPGSKSFYLQELFPEYEDAGTLPDDVIEITRETYEQFLGLHPEGKEIGADSSGR PVWINSPPPSKEDEVLTAEMKKISLVSEVNTYINTHQWPGKAAIGRLKGEELAQYNSWLD YLDALELVDTSCAPDIEWPTPPAVQAR >gi|296918656|gb|GG773044.1| GENE 93 70380 - 70670 130 96 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2862 NR:ns ## KEGG: ECS88_2862 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 96 69 164 164 161 100.0 6e-39 MNGMTDNAYAITGSNKSYIATATLPFVFPNKVLGVIPLVSTTAYGGVSSNITGSYATAVC SFAAVRGNNTIVFKVDKPLNAAFPSDTSVSALIIGR >gi|296918656|gb|GG773044.1| GENE 94 70901 - 71029 116 42 aa, chain + ## HITS:1 COG:ECs0284 KEGG:ns NR:ns ## COG: ECs0284 COG1961 # Protein_GI_number: 15829538 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Escherichia coli O157:H7 # 1 41 1 41 184 90 100.0 7e-19 MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSET >gi|296918656|gb|GG773044.1| GENE 95 71125 - 72639 290 504 aa, chain - ## HITS:1 COG:jhp0462_1 KEGG:ns NR:ns ## COG: jhp0462_1 COG1479 # Protein_GI_number: 15611529 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Helicobacter pylori J99 # 55 500 146 543 594 104 26.0 4e-22 MRNKEVERFKLWPTFRDQTHFIQSFNVENIDDLRDVFSDSFTQHGTLRKHFNHPPSLEAL CFFTEAFIKWIKIENHSPQENAVALIEAVLTDLKLVSIFLEAEDDAQIIFETLNGRGAEL HATDLIRNYIFMCAEHENINAIELYENEWKSFEDKYWSEKQRRGRINKPRMEWLVHATLQ SERQREIDLSRLYNEYRDYVSKDLSSQRADLQVKRLKQYASQYKELVDGFGTTPISHFGY RIADYDVTTLYPLALFISIANIADDEKAAMYNDLVSYVVRRAVCGLTPKNYNNVFMNVLR HLAKTEISSVELRNILNNLNGEASRWPGDSEFLNACINAPLYPGRLDAPKMRSMLTELER ELCRQVKTEKPDVPNLSNLDIDHLMPQSWYSCWPLENGRMVTNSDATVLNQIVLSGTDLT PEQLLVRKRQQAISTLGNLTLLNLSVNRSVQNAVFLKKRDALIVHTNLRLNIPLIVKDKW DEDEILERGKKLGEIALKVWPKHD >gi|296918656|gb|GG773044.1| GENE 96 74066 - 74839 133 257 aa, chain + ## HITS:1 COG:ECs0285 KEGG:ns NR:ns ## COG: ECs0285 COG3680 # Protein_GI_number: 15829539 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 257 1 257 257 457 84.0 1e-129 MDINEFPSGVIEHLGWYVYRLIDPRDGSTFYVGKGKGNRVFAHMRGEVAAVDDDELLNNK LRQLREIRLAGLDVIHVIHRHGMAEEKTAYEVEAALIDAYPGLTNIMNGAGSNEFGAAHI KELIATYQPETITFQHKALMISVNRSSKDIDLYDAVRFSWRVSVDRARKAEIILATVRGI VRGVYIADEWLKSTRENFPEMTSWEADDEFEATQCSRFGFRGRVASPEITQLYIGKKIPD DLRKKGAMSPVRYSPGF >gi|296918656|gb|GG773044.1| GENE 97 75050 - 75343 110 97 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2855 NR:ns ## KEGG: ECS88_2855 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 97 1 97 97 187 100.0 1e-46 MTLPKFRNDLQVEANYSINQAREMVGKTVKSVQIGFQKTGVQVHQTEMLIITFTDDTQLA ISTGSNVVNITSLIGRGGSCELKPADFHVDFDLTWQR >gi|296918656|gb|GG773044.1| GENE 98 75431 - 76219 342 262 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2854 NR:ns ## KEGG: ECS88_2854 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 262 1 262 262 513 100.0 1e-144 MTNLQLEERFRALEKDYDALISTKYTAQNVLTHTMETYVDSGKYKNWIARVKKLIEDSYG KESDYYNDFNTVNSRWSSNYNTLIKSYKPLFDAARDDLAHSAVSTNTPQEGSPLSLVLNI LNRFPTFVRQLKRRYNGRAPLEVNDEYDVQDLIYALLTLHFNDIRAEEYTPSFAGAASRQ DFLLKKEKIVIEVKKTRESLGAGKVGGELLIDMARYRAHQDCDTLILFVYDPDCYINNPL GVKTDLESKDAEGKVKVVIAQF >gi|296918656|gb|GG773044.1| GENE 99 76216 - 76413 110 65 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2853 NR:ns ## KEGG: ECS88_2853 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 65 1 65 65 118 100.0 9e-26 MALDSYASPNIIPELRQPNAAAGKITLGGLDRMAVTPSVKKRRLSMVEFPYAQTLLSDYT AWKAL >gi|296918656|gb|GG773044.1| GENE 100 77375 - 77857 479 160 aa, chain - ## HITS:1 COG:ECs3482 KEGG:ns NR:ns ## COG: ECs3482 COG0691 # Protein_GI_number: 15832736 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 308 100.0 3e-84 MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR >gi|296918656|gb|GG773044.1| GENE 101 78016 - 78465 322 149 aa, chain + ## HITS:1 COG:yfjG KEGG:ns NR:ns ## COG: yfjG COG2867 # Protein_GI_number: 16130538 # Func_class: I Lipid transport and metabolism # Function: Oligoketide cyclase/lipid transport protein # Organism: Escherichia coli K12 # 1 149 10 158 158 292 98.0 2e-79 MEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKA GISKTFTTRNQLTSNQSILMSLVDGPFKKLIGGWKFTPLSQDACRIEFHLDFEFTNKLIE LAFGRVFKELAANMVQAFTVRAKEVYSAR >gi|296918656|gb|GG773044.1| GENE 102 78455 - 78745 339 96 aa, chain + ## HITS:1 COG:yfjF KEGG:ns NR:ns ## COG: yfjF COG2914 # Protein_GI_number: 16130537 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 96 7 102 102 162 97.0 2e-40 MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPA KLSDIVHDGDRVEIYRPLIADPKELRRQRAEKSANK >gi|296918656|gb|GG773044.1| GENE 103 78807 - 79148 359 113 aa, chain - ## HITS:1 COG:STM2685 KEGG:ns NR:ns ## COG: STM2685 COG2913 # Protein_GI_number: 16766000 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Salmonella typhimurium LT2 # 1 111 1 111 112 198 92.0 2e-51 MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVSKIRVGMTQQQVAYALG TPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN >gi|296918656|gb|GG773044.1| GENE 104 79297 - 80958 1537 553 aa, chain - ## HITS:1 COG:ECs3478 KEGG:ns NR:ns ## COG: ECs3478 COG0497 # Protein_GI_number: 15832732 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli O157:H7 # 1 553 1 553 553 995 98.0 0 MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA RADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLREL GQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSQLQEMTARYQLWHQSCRDLAHHQQLS QERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDA NLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFE LEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALET ARALHQQRQHYANELAQLITDSMHALSMPHGQFTIDVKFDEHHLGADGADRIEFRVTTNP GQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL GESTQVMCVTPLPQVAGCGHQHYFVSKETDGAMTETHMQSLDKKARLQELARLLGGSEVT RNTLANAKELLAA >gi|296918656|gb|GG773044.1| GENE 105 81044 - 81922 609 292 aa, chain - ## HITS:1 COG:yfjB KEGG:ns NR:ns ## COG: yfjB COG0061 # Protein_GI_number: 16130534 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Escherichia coli K12 # 1 292 1 292 292 608 99.0 1e-174 MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIAHELQLKNVKTGTLAEI GQQADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLTDLDPDNAQQQLADVLEGH YISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMIEFEVYIDEIFAFSQRSDGLI ISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRNDL EISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF >gi|296918656|gb|GG773044.1| GENE 106 81854 - 82048 158 64 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C2948 NR:ns ## KEGG: UTI89_C2948 # Name: yfjC # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 64 20 83 83 118 100.0 8e-26 MCCQCSGVPWVSHNANTLEMIIHFSEVLVAKIDDNVSASLETLKLIPIISEVSEMNAKKT RRNS >gi|296918656|gb|GG773044.1| GENE 107 82045 - 82638 859 197 aa, chain + ## HITS:1 COG:ECs3476 KEGG:ns NR:ns ## COG: ECs3476 COG0576 # Protein_GI_number: 15832730 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Escherichia coli O157:H7 # 1 196 1 196 197 314 100.0 6e-86 MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKIANLEAQLAEAQTRERD GILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKANPDMSAMV EGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTL NGRTIRAAMVTVAKAKD >gi|296918656|gb|GG773044.1| GENE 108 82735 - 83976 1195 413 aa, chain - ## HITS:1 COG:yfjDm KEGG:ns NR:ns ## COG: yfjDm COG4536 # Protein_GI_number: 16132248 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorB # Organism: Escherichia coli K12 # 5 413 12 420 420 771 100.0 0 MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNI LASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPL QILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLS VLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVR EAWRLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGL VTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDART VNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE >gi|296918656|gb|GG773044.1| GENE 109 84042 - 84833 701 263 aa, chain - ## HITS:1 COG:ECs3474 KEGG:ns NR:ns ## COG: ECs3474 COG4137 # Protein_GI_number: 15832728 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 263 26 288 288 446 100.0 1e-125 MPVFALLALVAYSVSLALIVPGLLQKNGGWRRMAIISAVIALVCHAIALEARILPDGDSG QNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLALATFMPNEYITHLEA TPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFNQEMPPLMSIERKMFHIT QIGVVLLTLTLCTGLFYMHNLFSMENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWF NVAGAVILTLAYFGSRIVQQLIS >gi|296918656|gb|GG773044.1| GENE 110 85000 - 86361 1675 453 aa, chain + ## HITS:1 COG:ECs3473 KEGG:ns NR:ns ## COG: ECs3473 COG0541 # Protein_GI_number: 15832727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 803 100.0 0 MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAV GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR >gi|296918656|gb|GG773044.1| GENE 111 86438 - 86746 524 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|110806723|ref|YP_690243.1| 30S ribosomal protein S16 [Shigella flexneri 5 str. 8401] # 1 102 1 102 102 206 100 4e-52 MTPDSVPRWGPVVLFTQEDVMVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFN PIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA >gi|296918656|gb|GG773044.1| GENE 112 86765 - 87313 189 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 11 177 2 160 179 77 29 3e-13 MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQL ESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTE GYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDP GF >gi|296918656|gb|GG773044.1| GENE 113 87344 - 88111 598 255 aa, chain + ## HITS:1 COG:ECs3470 KEGG:ns NR:ns ## COG: ECs3470 COG0336 # Protein_GI_number: 15832724 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 488 100.0 1e-138 MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGM LMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDE RVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFAEGLLDCPH YTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEF KTEHAQQQHKHDGMA >gi|296918656|gb|GG773044.1| GENE 114 88153 - 88500 573 115 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803128|ref|NP_289159.1| 50S ribosomal protein L19 [Escherichia coli O157:H7 EDL933] # 1 115 1 115 115 225 100 8e-58 MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFT VRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN >gi|296918656|gb|GG773044.1| GENE 115 88577 - 89059 290 160 aa, chain - ## HITS:1 COG:yfiB KEGG:ns NR:ns ## COG: yfiB COG2885 # Protein_GI_number: 16130526 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli K12 # 1 160 1 160 160 306 98.0 1e-83 MIKHLLAPLIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKND YKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEVLSLKRANVVADAWAMGG QIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP >gi|296918656|gb|GG773044.1| GENE 116 89075 - 90298 710 407 aa, chain - ## HITS:1 COG:yfiN_2 KEGG:ns NR:ns ## COG: yfiN_2 COG2199 # Protein_GI_number: 16130525 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 240 407 1 168 168 330 99.0 2e-90 MDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMT YSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTHKEPGDTFSNFIS HWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL HNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHAT GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL HNGHQTTMTLSIGYAMTIEHASAENLQELADHNMYQAKHQRAEKLVR >gi|296918656|gb|GG773044.1| GENE 117 90291 - 90809 194 172 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2789 NR:ns ## KEGG: ECS88_2789 # Name: yfiR # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 172 1 172 172 331 100.0 7e-90 MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPGLSGPPKLCIFSSS RFSTALQENAATSLPYLPVIIHTQQEAIISGCNGFYFGNESPTFQMELTEQYPSKALLLI AEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG >gi|296918656|gb|GG773044.1| GENE 118 90958 - 91320 317 120 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_2927 NR:ns ## KEGG: ECUMN_2927 # Name: yfiL # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 120 2 121 121 239 100.0 2e-62 MKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRG LYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQLHEVWRKGADENASTIRLN >gi|296918656|gb|GG773044.1| GENE 119 91533 - 92603 1081 356 aa, chain + ## HITS:1 COG:aroF KEGG:ns NR:ns ## COG: aroF COG0722 # Protein_GI_number: 16130522 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli K12 # 1 356 1 356 356 705 99.0 0 MQKDALNNVHITAEQVLMTPEQLKAAFPLSLQQEAQIADSRKTISDIIAGRDPRLLVVCG PCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTTVGWKGLINDPHMDGSFDV EAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGL SMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQVALLQTQGNPDGHVILRGGKAP NYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDYRRQPAVAESVVAQIKDGNRSIIGL MIESNIHEGNQSSEQPRSEMKYGVSVTDACISWEMTDALLREIHQDLNGQLTARVA >gi|296918656|gb|GG773044.1| GENE 120 92614 - 93735 1188 373 aa, chain + ## HITS:1 COG:ECs3463_2 KEGG:ns NR:ns ## COG: ECs3463_2 COG0287 # Protein_GI_number: 15832717 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Escherichia coli O157:H7 # 100 373 1 274 274 556 99.0 1e-158 MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAE AEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTL SGYQVRILEQHDWDRAADIVSDAGMVIVSVPIHVTEQVIGKLPPLPKDCILVDLASVKNG PLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDP QLYADIIMSSERNLALIKRYYKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSE SRVLLRQANDNRQ >gi|296918656|gb|GG773044.1| GENE 121 93800 - 94960 957 386 aa, chain - ## HITS:1 COG:ECs3462_2 KEGG:ns NR:ns ## COG: ECs3462_2 COG0077 # Protein_GI_number: 15832716 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Escherichia coli O157:H7 # 105 386 1 282 282 564 99.0 1e-160 MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHRPVRDIDRERDLLERLI TLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPHSARIAFLGPKGSYSHLAA RQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIENTSSGAINDVYDLLQHTSLSI VGEMTLTIDHCLLVSGTTDLSAINTVYSHPQPFQQCSKFLNRYPHWKIEYTESTSAAMEK VAQAKSPHVAALGSEAGGTLYGLQVLERIEANQRQNFTRFVVLARKAINVSDQVPAKTTL LMATGQQAGALVEALLVLRNHSLIMTRLESRPIHGNPWEEMFYLDIQANLESAEMQKALK ELGEITRSMKVLGCYPSENVVPVDPT >gi|296918656|gb|GG773044.1| GENE 122 95252 - 95593 574 113 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803120|ref|NP_289151.1| translation inhibitor protein RaiA [Escherichia coli O157:H7 EDL933] # 1 113 1 113 113 225 100 6e-58 MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVADATINTPNGV LVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVKDANFVEEVEEE >gi|296918656|gb|GG773044.1| GENE 123 95828 - 96565 787 245 aa, chain - ## HITS:1 COG:ECs3458 KEGG:ns NR:ns ## COG: ECs3458 COG4105 # Protein_GI_number: 15832712 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 466 100.0 1e-131 MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDN RYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALD DSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYS VAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAA NSSNT >gi|296918656|gb|GG773044.1| GENE 124 96700 - 97680 1064 326 aa, chain + ## HITS:1 COG:sfhB KEGG:ns NR:ns ## COG: sfhB COG0564 # Protein_GI_number: 16130515 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Escherichia coli K12 # 1 326 1 326 326 623 99.0 1e-178 MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL GGEQMAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNALL HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM AHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQSLHATMLRLYHPISGIEMEWHAP IPQDMVELIEVMRADFEEHKDEVDWL >gi|296918656|gb|GG773044.1| GENE 125 97677 - 98408 550 243 aa, chain + ## HITS:1 COG:ECs3456 KEGG:ns NR:ns ## COG: ECs3456 COG1496 # Protein_GI_number: 15832710 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 243 1 243 243 500 98.0 1e-141 MSKLIVPQWPLPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNL PSKPVWLEQVHGKDVLKLIGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEV AAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGAEVREAFMAVDAEAS TAFIQHGDKYLADIYQLARQRLASVGVEQIFGGDRCTYTENETFFSYRRDKTTGRMASFI WLI >gi|296918656|gb|GG773044.1| GENE 126 98538 - 101111 1841 857 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 857 1 811 815 713 46 0.0 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK RLYKRLEERGYEIHISDEVLKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP GKVIRLEVNEDRIVAVQ Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:55:01 2011 Seq name: gi|296918655|gb|GG773045.1| Escherichia coli MS 110-3 genomic scaffold Scfld725, whole genome shotgun sequence Length of sequence - 2849 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 169 - 402 102 ## - Prom 468 - 527 4.5 + Prom 479 - 538 6.5 2 2 Op 1 . + CDS 692 - 1126 315 ## COG0148 Enolase 3 2 Op 2 . + CDS 1180 - 1395 85 ## pECS88_0016 hypothetical protein 4 3 Tu 1 . - CDS 2227 - 2841 314 ## COG0477 Permeases of the major facilitator superfamily Predicted protein(s) >gi|296918655|gb|GG773045.1| GENE 1 169 - 402 102 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFCHYFPHFTALFATPENRHYLLSSPQQLSGNKTYQNHKSVHYSFKRIANKRMLLAECSA NRMITNPVVRHFPLCVR >gi|296918655|gb|GG773045.1| GENE 2 692 - 1126 315 144 aa, chain + ## HITS:1 COG:ML0255 KEGG:ns NR:ns ## COG: ML0255 COG0148 # Protein_GI_number: 15827047 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Mycobacterium leprae # 8 143 304 439 447 167 54.0 7e-42 MIFLPLTVAEDDWAGWKILHGALGEQIELVGDDLFVTNVKYIQRGIDENLANSALIKLNQ IGSLSETFDAVQLCHDNNWGTFISHRSGETVDSFIADMTVAMRAGHLKTGAPCRGERIEK YNQLMRIEDELGSSAQFAGKSAFK >gi|296918655|gb|GG773045.1| GENE 3 1180 - 1395 85 71 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0016 NR:ns ## KEGG: pECS88_0016 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 71 20 90 90 110 100.0 2e-23 MKAHVFVISMLTGIVVTYAVLLLGCLFIDKTLPTVDVVILSLVVGASAQQLSRVLMSINR TFPYLACSQRI >gi|296918655|gb|GG773045.1| GENE 4 2227 - 2841 314 204 aa, chain - ## HITS:1 COG:YPO0988 KEGG:ns NR:ns ## COG: YPO0988 COG0477 # Protein_GI_number: 16121292 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 9 198 206 395 407 135 51.0 4e-32 MLLRLPGTPPQPTPERKSVSLKRDCLPYLLCAMLLAAAMSMMQLGLSPALTRQFDTDTTT ISQQVAWLLGLSAIAALIAQFVVLRPQRLTPVALLLSAGVLMSSGLAIMLTEQLWLFYLG CAVLSFGAALATPAYQLLLNDKLADGAGAGWLAASHTLGYGLCALLVPLASKTGVSIALI VTALFAAVLFTIVSACIWHYRTIK Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:55:10 2011 Seq name: gi|296918654|gb|GG773046.1| Escherichia coli MS 110-3 genomic scaffold Scfld747, whole genome shotgun sequence Length of sequence - 2406 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 109 - 588 485 ## SeHA_C4681 antirestriction protein - Prom 608 - 667 1.5 2 1 Op 2 . - CDS 854 - 1600 608 ## ECS88_4646 hypothetical protein - Prom 1686 - 1745 80.4 3 2 Op 1 . - CDS 1923 - 2156 59 ## EcSMS35_3206 hypothetical protein 4 2 Op 2 . - CDS 2162 - 2404 98 ## EcSMS35_4800 hypothetical protein Predicted protein(s) >gi|296918654|gb|GG773046.1| GENE 1 109 - 588 485 159 aa, chain - ## HITS:1 COG:no KEGG:SeHA_C4681 NR:ns ## KEGG: SeHA_C4681 # Name: not_defined # Def: antirestriction protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 159 1 159 159 333 98.0 2e-90 MKIVSQNTTALSSATAPGNNQPQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMD RLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLM TYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID >gi|296918654|gb|GG773046.1| GENE 2 854 - 1600 608 248 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4646 NR:ns ## KEGG: ECS88_4646 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 248 25 272 272 488 99.0 1e-136 MYHVPSIFGEDRHTSRSERYAYIPTITVLENLQREGFQPFFACQTRVRDQSRREYTKHML RLRRAGQITGQHVPEIILLNSHDGSSSYQMLPGYFRAICTNGLVCGQSLGELRVPHRGNV VEKVIEGAYEVVGVFDRIEEKRDAMQSLVLPPPTRQALAQAALTYRYGDEHQPVTTADIL TPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGKRIHTRAIHSIDTGIKLNRALWVMA ETLLESLR >gi|296918654|gb|GG773046.1| GENE 3 1923 - 2156 59 77 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_3206 NR:ns ## KEGG: EcSMS35_3206 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 77 1 77 77 163 100.0 2e-39 MSDCHPVLLPEGPFSREQAVAVTTAYRNVLIEDDQGTHFRLVIRNAEGQLRWRCWNFEPD AGKQLNSYLASEGILRQ >gi|296918654|gb|GG773046.1| GENE 4 2162 - 2404 98 80 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_4800 NR:ns ## KEGG: EcSMS35_4800 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 80 181 260 260 157 100.0 1e-37 SPKQTTTINKDSVLQAARQAYAREYDEETTETADFGSYEVKGNKVEFEVFNPEDRAYDKV TVTVGADGNATGASVEFIGK Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:55:22 2011 Seq name: gi|296918653|gb|GG773047.1| Escherichia coli MS 110-3 genomic scaffold Scfld815, whole genome shotgun sequence Length of sequence - 908 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 8 - 67 6.3 1 1 Op 1 . + CDS 234 - 437 94 ## gi|300916181|ref|ZP_07132938.1| plasmid recombination enzyme 2 1 Op 2 . + CDS 453 - 906 -23 ## gi|315284790|gb|EFU44235.1| conserved domain protein Predicted protein(s) >gi|296918653|gb|GG773047.1| GENE 1 234 - 437 94 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300916181|ref|ZP_07132938.1| ## NR: gi|300916181|ref|ZP_07132938.1| plasmid recombination enzyme [Escherichia coli MS 115-1] plasmid recombination enzyme [Escherichia coli MS 115-1] # 1 64 53 116 235 110 100.0 4e-23 MSYIKNNDIVIRNKDTVIFNEFVLTASPEFFFNNKDGSKKSRSEYKSNLKDWVKTQIDFL EKENLAS >gi|296918653|gb|GG773047.1| GENE 2 453 - 906 -23 151 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315284790|gb|EFU44235.1| ## NR: gi|315284790|gb|EFU44235.1| conserved domain protein [Escherichia coli MS 110-3] # 1 151 5 155 156 246 99.0 5e-64 MHLDESTPHIHALILPIVDNKLNNKSFWRGKNSYGRLQDIYNTANSKFGLKRGEEKSKTL VDHTTLKDYRDLIRQDKDEENEFYNELSKNILDTPPRKNFIGLEKKYSAEEVKEIASATF KKLNRQRRRAKFRAKKSDEKADAATSEFYKK Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:56:18 2011 Seq name: gi|296918652|gb|GG773048.1| Escherichia coli MS 110-3 genomic scaffold Scfld822, whole genome shotgun sequence Length of sequence - 132785 bp Number of predicted genes - 124, with homology - 124 Number of transcription units - 60, operones - 25 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 4/0.429 - CDS 952 - 2403 1394 ## COG0168 Trk-type K+ transport systems, membrane components 3 1 Op 3 2/0.714 - CDS 2442 - 3056 489 ## COG1739 Uncharacterized conserved protein 4 1 Op 4 . - CDS 3056 - 4387 1644 ## COG0006 Xaa-Pro aminopeptidase - Prom 4485 - 4544 4.3 + Prom 4441 - 4500 5.6 5 2 Op 1 20/0.000 + CDS 4577 - 6766 2751 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 6 2 Op 2 . + CDS 6776 - 7939 1358 ## COG0183 Acetyl-CoA acetyltransferase 7 3 Op 1 6/0.086 - CDS 8277 - 8978 724 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 8 3 Op 2 . - CDS 9024 - 10517 1607 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases - Prom 10592 - 10651 3.9 + Prom 10531 - 10590 6.4 9 4 Tu 1 . + CDS 10684 - 11172 366 ## COG0250 Transcription antiterminator + Term 11207 - 11244 1.0 10 5 Tu 1 2/0.714 - CDS 11169 - 11951 510 ## COG0084 Mg-dependent DNase - Term 11959 - 11994 9.9 11 6 Op 1 28/0.000 - CDS 12030 - 12806 788 ## COG0805 Sec-independent protein secretion pathway component TatC 12 6 Op 2 16/0.000 - CDS 12809 - 13324 453 ## COG1826 Sec-independent protein secretion pathway components 13 6 Op 3 6/0.086 - CDS 13328 - 13597 200 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 - Term 13620 - 13654 -1.0 14 6 Op 4 10/0.029 - CDS 13676 - 15316 1589 ## COG0661 Predicted unusual protein kinase 15 6 Op 5 7/0.086 - CDS 15313 - 15918 690 ## COG3165 Uncharacterized protein conserved in bacteria 16 6 Op 6 5/0.343 - CDS 15932 - 16687 365 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 - Prom 16714 - 16773 3.2 17 6 Op 7 . - CDS 16782 - 18194 1544 ## COG1322 Uncharacterized protein conserved in bacteria - Prom 18317 - 18376 3.1 + Prom 18305 - 18364 4.7 18 7 Op 1 1/0.829 + CDS 18426 - 19193 767 ## COG1414 Transcriptional regulator 19 7 Op 2 2/0.714 + CDS 19217 - 20221 668 ## COG3734 2-keto-3-deoxy-galactonokinase 20 7 Op 3 . + CDS 20211 - 20840 610 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 21 7 Op 4 . + CDS 20865 - 21839 1089 ## COG3181 Uncharacterized protein conserved in bacteria 22 7 Op 5 . + CDS 21856 - 22362 300 ## APECO1_2628 hypothetical protein 23 7 Op 6 . + CDS 22375 - 23865 1454 ## COG3333 Uncharacterized protein conserved in bacteria + Term 23873 - 23911 12.1 - Term 23822 - 23856 -0.8 24 8 Tu 1 . - CDS 23935 - 24699 982 ## COG2820 Uridine phosphorylase - Prom 24946 - 25005 6.5 + Prom 24874 - 24933 5.3 25 9 Tu 1 . + CDS 24961 - 25770 724 ## COG0412 Dienelactone hydrolase and related enzymes + Prom 25777 - 25836 4.3 26 10 Op 1 . + CDS 26027 - 26695 652 ## COG1335 Amidases related to nicotinamidase 27 10 Op 2 . + CDS 26701 - 27561 295 ## ECS88_4272 hypothetical protein 28 10 Op 3 . + CDS 27656 - 29215 1263 ## COG0074 Succinyl-CoA synthetase, alpha subunit 29 10 Op 4 . + CDS 29212 - 30636 1024 ## ECS88_4270 hypothetical protein 30 10 Op 5 . + CDS 30629 - 31585 894 ## COG0549 Carbamate kinase 31 10 Op 6 . + CDS 31602 - 31991 455 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 32 10 Op 7 . + CDS 32017 - 33240 1248 ## COG1457 Purine-cytosine permease and related proteins + Term 33269 - 33306 6.4 33 11 Tu 1 . + CDS 33318 - 34223 696 ## COG0583 Transcriptional regulator + Prom 34226 - 34285 8.6 34 12 Tu 1 . + CDS 34424 - 35269 748 ## COG1737 Transcriptional regulators + Term 35288 - 35345 3.6 35 13 Op 1 . - CDS 35299 - 37296 2101 ## COG0021 Transketolase 36 13 Op 2 . - CDS 37347 - 38855 1358 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 37 13 Op 3 . - CDS 38897 - 39454 546 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation - Prom 39517 - 39576 6.7 + Prom 39717 - 39776 7.4 38 14 Tu 1 . + CDS 39939 - 40232 190 ## COG3157 Hemolysin-coregulated protein (uncharacterized) + Term 40361 - 40400 1.3 39 15 Op 1 . + CDS 40658 - 41071 205 ## ECP_4026 protein of unknown function (DUF796); region: DUF796; cl01226 40 15 Op 2 . + CDS 41068 - 41325 244 ## ECS88_4259 hypothetical protein 41 15 Op 3 . + CDS 41400 - 41645 82 ## ECP_4024 hypothetical protein + Term 41754 - 41787 4.7 - Term 41742 - 41775 4.7 42 16 Tu 1 . - CDS 41814 - 44075 2762 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 44123 - 44182 3.0 + Prom 44100 - 44159 4.9 43 17 Tu 1 . + CDS 44193 - 45146 669 ## COG0583 Transcriptional regulator 44 18 Op 1 3/0.514 - CDS 45034 - 45933 1049 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 45 18 Op 2 5/0.343 - CDS 46009 - 46809 839 ## COG0561 Predicted hydrolases of the HAD superfamily 46 18 Op 3 . - CDS 46817 - 47839 661 ## COG2267 Lysophospholipase - Prom 47940 - 47999 2.5 + Prom 47818 - 47877 4.5 47 19 Tu 1 . + CDS 47950 - 48570 508 ## COG1280 Putative threonine efflux protein + Term 48578 - 48619 6.4 - Term 48566 - 48607 2.6 48 20 Op 1 4/0.429 - CDS 48631 - 49251 720 ## COG1280 Putative threonine efflux protein 49 20 Op 2 5/0.343 - CDS 49315 - 51150 1904 ## COG0514 Superfamily II DNA helicase - Prom 51173 - 51232 4.5 - Term 51160 - 51193 4.5 50 21 Tu 1 . - CDS 51269 - 52138 922 ## COG2829 Outer membrane phospholipase A - Prom 52251 - 52310 4.3 + Prom 52215 - 52274 5.2 51 22 Op 1 1/0.829 + CDS 52303 - 52770 464 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 52 22 Op 2 . + CDS 52822 - 53712 1010 ## COG2962 Predicted permeases + Term 53738 - 53775 1.7 + Prom 53906 - 53965 8.4 53 23 Op 1 . + CDS 54023 - 54871 227 ## ECS88_4244 hypothetical protein 54 23 Op 2 . + CDS 54937 - 55365 138 ## ECS88_4243 hypothetical protein + Term 55366 - 55407 5.0 - Term 55354 - 55393 8.4 55 24 Tu 1 . - CDS 55401 - 56351 1221 ## COG0598 Mg2+ and Co2+ transporters 56 25 Op 1 2/0.714 + CDS 56721 - 57485 722 ## COG3698 Predicted periplasmic protein 57 25 Op 2 . + CDS 57568 - 58470 801 ## COG1912 Uncharacterized conserved protein - Term 58459 - 58512 -1.0 58 26 Tu 1 . - CDS 58515 - 60506 2054 ## COG0210 Superfamily I DNA and RNA helicases - Prom 60613 - 60672 20.1 - Term 60710 - 60753 5.0 59 27 Op 1 8/0.057 - CDS 60783 - 61499 533 ## COG1011 Predicted hydrolase (HAD superfamily) 60 27 Op 2 10/0.029 - CDS 61499 - 62395 919 ## COG4973 Site-specific recombinase XerC 61 27 Op 3 4/0.429 - CDS 62392 - 63099 702 ## COG3159 Uncharacterized protein conserved in bacteria 62 27 Op 4 1/0.829 - CDS 63096 - 63920 781 ## COG0253 Diaminopimelate epimerase 63 27 Op 5 . - CDS 63957 - 64160 192 ## COG5567 Predicted small periplasmic lipoprotein - Prom 64267 - 64326 4.7 + Prom 64229 - 64288 2.4 64 28 Op 1 . + CDS 64349 - 65164 461 ## c4728 hypothetical protein 65 28 Op 2 . + CDS 65249 - 65818 279 ## c4728 hypothetical protein 66 28 Op 3 . + CDS 65815 - 67131 317 ## ECS88_4231 hypothetical protein 67 28 Op 4 . + CDS 67179 - 67499 506 ## COG1965 Protein implicated in iron transport, frataxin homolog + Term 67507 - 67544 6.1 68 29 Tu 1 . - CDS 67539 - 70085 2264 ## COG3072 Adenylate cyclase - Prom 70239 - 70298 5.3 + Prom 70270 - 70329 3.8 69 30 Op 1 23/0.000 + CDS 70472 - 71413 1110 ## COG0181 Porphobilinogen deaminase 70 30 Op 2 10/0.029 + CDS 71410 - 72150 481 ## COG1587 Uroporphyrinogen-III synthase 71 30 Op 3 11/0.029 + CDS 72172 - 73365 1304 ## COG2959 Uncharacterized enzyme of heme biosynthesis 72 30 Op 4 . + CDS 73368 - 74564 1367 ## COG3071 Uncharacterized enzyme of heme biosynthesis + Term 74575 - 74609 4.6 + Prom 74598 - 74657 10.0 73 31 Op 1 5/0.343 + CDS 74846 - 75133 397 ## COG2929 Uncharacterized protein conserved in bacteria 74 31 Op 2 . + CDS 75120 - 75422 378 ## COG3514 Uncharacterized protein conserved in bacteria 75 32 Op 1 3/0.514 - CDS 75486 - 76442 1032 ## COG0523 Putative GTPases (G3E family) 76 32 Op 2 9/0.029 - CDS 76453 - 76656 270 ## COG2879 Uncharacterized small protein - Term 76667 - 76696 3.5 77 32 Op 3 . - CDS 76706 - 78856 2669 ## COG1966 Carbon starvation protein, predicted membrane protein + Prom 79051 - 79110 5.4 78 33 Tu 1 . + CDS 79233 - 80897 1730 ## COG0840 Methyl-accepting chemotaxis protein - Term 80896 - 80937 7.1 79 34 Op 1 21/0.000 - CDS 80946 - 81806 825 ## COG0477 Permeases of the major facilitator superfamily 80 34 Op 2 3/0.514 - CDS 81865 - 82305 254 ## COG0477 Permeases of the major facilitator superfamily - Prom 82337 - 82396 1.8 - Term 82360 - 82403 1.7 81 35 Tu 1 . - CDS 82520 - 83434 560 ## COG1802 Transcriptional regulators - Prom 83459 - 83518 4.0 + Prom 83423 - 83482 3.9 82 36 Tu 1 . + CDS 83573 - 84595 1041 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 84623 - 84661 3.4 83 37 Tu 1 . - CDS 84732 - 87023 2219 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 87075 - 87134 4.2 - Term 87222 - 87266 5.1 84 38 Op 1 . - CDS 87277 - 87768 473 ## S4661 hypothetical protein 85 38 Op 2 . - CDS 87820 - 88557 828 ## COG1484 DNA replication protein 86 38 Op 3 . - CDS 88560 - 89099 535 ## COG5529 Pyocin large subunit - Prom 89140 - 89199 2.3 - Term 89142 - 89189 2.4 87 39 Op 1 12/0.029 - CDS 89207 - 89680 437 ## COG3610 Uncharacterized conserved protein 88 39 Op 2 . - CDS 89671 - 90495 428 ## COG2966 Uncharacterized conserved protein - Prom 90583 - 90642 6.1 + Prom 90964 - 91023 3.2 89 40 Op 1 . + CDS 91111 - 91785 284 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 90 40 Op 2 . + CDS 91797 - 92420 304 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 92430 - 92465 2.4 91 41 Tu 1 . - CDS 92458 - 93246 601 ## COG4114 Uncharacterized Fe-S protein - Prom 93336 - 93395 5.7 + Prom 93295 - 93354 3.5 92 42 Tu 1 . + CDS 93387 - 93623 221 ## UTI89_C5074 hypothetical protein + Term 93664 - 93719 6.3 + Prom 94139 - 94198 8.7 93 43 Tu 1 . + CDS 94325 - 95980 1719 ## COG3119 Arylsulfatase A and related enzymes 94 44 Tu 1 . - CDS 96138 - 97373 909 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) + Prom 97264 - 97323 2.0 95 45 Tu 1 . + CDS 97477 - 97935 -167 ## gi|157081634|gb|ABV11312.1| hypothetical protein CKO_00142 - TRNA 97563 - 97639 92.7 # Pro TGG 0 0 - TRNA 97871 - 97946 84.9 # His GTG 0 0 - TRNA 98005 - 98081 89.5 # Arg CCG 0 0 96 46 Tu 1 . - CDS 98184 - 99569 1453 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 99670 - 99729 4.5 - Term 99697 - 99746 6.1 97 47 Op 1 . - CDS 99760 - 100500 891 ## COG1922 Teichoic acid biosynthesis proteins 98 47 Op 2 . - CDS 100503 - 101855 1370 ## EcSMS35_4158 putative common antigen polymerase 99 47 Op 3 . - CDS 101852 - 102931 730 ## ECS88_4215 4-alpha-L-fucosyltransferase 100 47 Op 4 6/0.086 - CDS 102928 - 104178 1203 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 101 47 Op 5 4/0.429 - CDS 104180 - 105310 1219 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 102 47 Op 6 4/0.429 - CDS 105315 - 105989 460 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 103 47 Op 7 16/0.000 - CDS 105967 - 106848 949 ## COG1209 dTDP-glucose pyrophosphorylase 104 47 Op 8 4/0.429 - CDS 106867 - 107934 1213 ## COG1088 dTDP-D-glucose 4,6-dehydratase 105 47 Op 9 10/0.029 - CDS 107934 - 109196 1193 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 106 47 Op 10 4/0.429 - CDS 109193 - 110323 909 ## COG0381 UDP-N-acetylglucosamine 2-epimerase - Term 110331 - 110368 9.2 107 48 Op 1 5/0.343 - CDS 110379 - 111425 943 ## COG3765 Chain length determinant protein 108 48 Op 2 3/0.514 - CDS 111437 - 112540 833 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase - Prom 112566 - 112625 4.8 - Term 112724 - 112766 9.1 109 49 Tu 1 . - CDS 112780 - 114039 1431 ## COG1158 Transcription termination factor - Prom 114221 - 114280 3.8 - Term 114280 - 114313 0.2 110 50 Tu 1 . - CDS 114366 - 114695 499 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 114806 - 114865 4.6 + Prom 114631 - 114690 2.4 111 51 Tu 1 . + CDS 114826 - 116091 1180 ## COG0513 Superfamily II DNA and RNA helicases 112 52 Tu 1 . + CDS 116227 - 117711 1719 ## COG0248 Exopolyphosphatase + Term 117721 - 117765 0.8 - Term 117656 - 117694 4.2 113 53 Tu 1 . - CDS 117758 - 119779 2162 ## COG0210 Superfamily I DNA and RNA helicases - Prom 119820 - 119879 3.6 114 54 Tu 1 . + CDS 119866 - 120147 256 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Term 120139 - 120177 10.2 115 55 Tu 1 . - CDS 120193 - 121668 2001 ## COG0059 Ketol-acid reductoisomerase - Prom 121722 - 121781 8.1 + Prom 121715 - 121774 4.5 116 56 Tu 1 . + CDS 121818 - 122708 794 ## COG0583 Transcriptional regulator + Term 122777 - 122806 0.5 - Term 122640 - 122670 1.0 117 57 Op 1 8/0.057 - CDS 122705 - 124249 1543 ## COG1171 Threonine dehydratase 118 57 Op 2 5/0.343 - CDS 124252 - 126102 2082 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 119 57 Op 3 5/0.343 - CDS 126167 - 127096 1098 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 120 57 Op 4 7/0.086 - CDS 127116 - 127379 237 ## COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit 121 57 Op 5 . - CDS 127376 - 129022 1459 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Prom 129497 - 129556 3.2 122 58 Tu 1 . + CDS 129613 - 131133 898 ## COG0606 Predicted ATPase with chaperone activity + Term 131382 - 131415 -0.2 123 59 Tu 1 . - CDS 131158 - 131496 432 ## COG3085 Uncharacterized protein conserved in bacteria - Prom 131575 - 131634 6.9 + Prom 131531 - 131590 6.1 124 60 Tu 1 . + CDS 131615 - 132454 607 ## COG0583 Transcriptional regulator + Term 132523 - 132556 3.1 - TRNA 132550 - 132625 82.1 # Trp CCA 0 0 - TRNA 132634 - 132710 90.7 # Asp GTC 0 0 Predicted protein(s) >gi|296918652|gb|GG773048.1| GENE 1 395 - 940 512 181 aa, chain - ## HITS:1 COG:ECs4778 KEGG:ns NR:ns ## COG: ECs4778 COG4635 # Protein_GI_number: 15834032 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism # Function: Flavodoxin # Organism: Escherichia coli O157:H7 # 1 181 1 181 181 358 100.0 2e-99 MKTLILFSTRDGQTREIASYLASELKELGIQADVANVHRIEEPQWENYDRVVIGASIRYG HYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTNSYARKFLMNSQWRPDRCA VIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTDWEQVANFAREIAHLTDKPTL K >gi|296918652|gb|GG773048.1| GENE 2 952 - 2403 1394 483 aa, chain - ## HITS:1 COG:ECs4777 KEGG:ns NR:ns ## COG: ECs4777 COG0168 # Protein_GI_number: 15834031 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Escherichia coli O157:H7 # 1 483 1 483 483 847 99.0 0 MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFFVALAIGSMLWWPNRKE KGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGL DSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAE TAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINT IIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFSLVVICTLVLWFHNVYSS ALMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRIL LLFKQGNRELKRLVHPNAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIATGV DDFSAFSSVVATLNNLGPGLGVVADNFTSMNPVAKWILIANMLFGRLEVFTLLVLFTPTF WRE >gi|296918652|gb|GG773048.1| GENE 3 2442 - 3056 489 204 aa, chain - ## HITS:1 COG:ECs4776 KEGG:ns NR:ns ## COG: ECs4776 COG1739 # Protein_GI_number: 15834030 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 204 2 205 205 373 100.0 1e-103 MESWLIPAAPVTVVEEIKKSRFITLLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGA PDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGG VNQALRQLTTQRKTPLTEYTLQCEYSQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAA KVAEFSAKLADFSRGSLQLLAIEE >gi|296918652|gb|GG773048.1| GENE 4 3056 - 4387 1644 443 aa, chain - ## HITS:1 COG:pepQ KEGG:ns NR:ns ## COG: pepQ COG0006 # Protein_GI_number: 16131693 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli K12 # 1 443 1 443 443 925 99.0 0 MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLDDHPYPFKVNPQFKAWV PVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPNSFWTEDVEVIALPKADGIGSLLP AARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRSFKTEYELACMREAQKMAVNG HRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIVALNEHAAVLHYTKLDHQAPEEM RSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKDVNDEQLALIATMKAGVSYVDYHIQ FHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMPHGIGHPLGLQVHDVAGFMQDDSGTHL AAPAKYPYLRCTRILQPGMVLTIEPGIYFIESLLAPWREGQFSKHFNWQKIEALKPFGGI RIEDNVVIHENNVENMTRDLKLA >gi|296918652|gb|GG773048.1| GENE 5 4577 - 6766 2751 729 aa, chain + ## HITS:1 COG:fadB_2 KEGG:ns NR:ns ## COG: fadB_2 COG1250 # Protein_GI_number: 16131692 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 307 729 1 423 423 831 98.0 0 MLYKGDTLYLDWLEDGIAELVFDTPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSN KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCEC VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALK IGLVDGVVKAEKLVEGAIAILRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVK GKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL NKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVRP DTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGAGFRKIDKVMEKQFGWPMGPAYL LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKP KKEEDVVVDDLLAKVSQPKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVY GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPA RPVGDLKTA >gi|296918652|gb|GG773048.1| GENE 6 6776 - 7939 1358 387 aa, chain + ## HITS:1 COG:ECs4773 KEGG:ns NR:ns ## COG: ECs4773 COG0183 # Protein_GI_number: 15834027 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli O157:H7 # 1 387 1 387 387 727 98.0 0 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQ TLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEH MGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAAT QSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLRPAFDPVSGTVTAGTSSA LSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSAS DIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM EHKDVQFGLATMCIGLGQGIATVFERV >gi|296918652|gb|GG773048.1| GENE 7 8277 - 8978 724 233 aa, chain - ## HITS:1 COG:ECs4772 KEGG:ns NR:ns ## COG: ECs4772 COG0543 # Protein_GI_number: 15834026 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Escherichia coli O157:H7 # 1 233 1 233 233 480 100.0 1e-136 MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDERDKRPFSMASTPDEKGF IELHIGASEINLYAKAVMDRILKDHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARS ILLTALARNPNRDITIYWGGREEQHLYDLCELEALSLKHPGLQVVPVVEQPEAGWRGRTG TVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSERNAREDRLFGDAFAFI >gi|296918652|gb|GG773048.1| GENE 8 9024 - 10517 1607 497 aa, chain - ## HITS:1 COG:ubiD KEGG:ns NR:ns ## COG: ubiD COG0043 # Protein_GI_number: 16131689 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Escherichia coli K12 # 1 497 1 497 497 1036 100.0 0 MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSM PVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNM PTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLITWGLTVTRGPHKERQNLGIYR QQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLS EYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGYIEQGETAPEGPYGDHTGYYNEVDS FPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEG CSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTR MDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIKKDPDVVAH IDAIWDELAIFNNGKSA >gi|296918652|gb|GG773048.1| GENE 9 10684 - 11172 366 162 aa, chain + ## HITS:1 COG:ECs4770 KEGG:ns NR:ns ## COG: ECs4770 COG0250 # Protein_GI_number: 15834024 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 328 99.0 2e-90 MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFD PEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPSTPYPGDKVIITE GAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL >gi|296918652|gb|GG773048.1| GENE 10 11169 - 11951 510 260 aa, chain - ## HITS:1 COG:ZtatD KEGG:ns NR:ns ## COG: ZtatD COG0084 # Protein_GI_number: 15804431 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli O157:H7 EDL933 # 1 260 5 264 264 531 98.0 1e-151 MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAG VHPHDSSQWQAVTEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAAEL NMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVACGIYIGITGWVCDE RRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGED AAWLAATTDANVKTLFGIAF >gi|296918652|gb|GG773048.1| GENE 11 12030 - 12806 788 258 aa, chain - ## HITS:1 COG:ECs4768 KEGG:ns NR:ns ## COG: ECs4768 COG0805 # Protein_GI_number: 15834022 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 464 99.0 1e-131 MSVEDTQPLITHLIELRKRLLNCIISVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMI ATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYI GMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCW MGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKG RNREEENDAEAESEKTEE >gi|296918652|gb|GG773048.1| GENE 12 12809 - 13324 453 171 aa, chain - ## HITS:1 COG:ECs4767 KEGG:ns NR:ns ## COG: ECs4767 COG1826 # Protein_GI_number: 15834021 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Escherichia coli O157:H7 # 1 171 1 171 171 266 99.0 1e-71 MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQ DSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNE TAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKTAAPSPSSSDKP >gi|296918652|gb|GG773048.1| GENE 13 13328 - 13597 200 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 79 3 81 83 81 51 2e-14 MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFT AKTIADKQADTNQEQAKTEDAKRHDKEQV >gi|296918652|gb|GG773048.1| GENE 14 13676 - 15316 1589 546 aa, chain - ## HITS:1 COG:ECs4765 KEGG:ns NR:ns ## COG: ECs4765 COG0661 # Protein_GI_number: 15834019 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Escherichia coli O157:H7 # 1 546 1 546 546 1104 99.0 0 MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKPLGERLRLA LQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEA WFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRL LPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGM MVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEH PENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFE FAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLY PQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQH SVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFV GWRKTR >gi|296918652|gb|GG773048.1| GENE 15 15313 - 15918 690 201 aa, chain - ## HITS:1 COG:yigP KEGG:ns NR:ns ## COG: yigP COG3165 # Protein_GI_number: 16131683 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 201 1 201 201 370 98.0 1e-102 MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGFSTSLILVFSERQVDVL GEWAGDADCTVIAYASVLPKLRDRQQLAALIRSGELEVQGDIQVVQNFVALADLAEFDPA ELLAPYTGDIAAEGISKALRGGAKFLHHGIKRQQCYVAEAITEEWRMAPGPLEVAWFAEE TAAVERAVDALTKRLEKLEAK >gi|296918652|gb|GG773048.1| GENE 16 15932 - 16687 365 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 28 250 1 221 221 145 34 1e-33 MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSG VRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYV QANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLS KAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKTMMQDAGFESVDYYNLTA GVVALHRGYKF >gi|296918652|gb|GG773048.1| GENE 17 16782 - 18194 1544 470 aa, chain - ## HITS:1 COG:ECs4762 KEGG:ns NR:ns ## COG: ECs4762 COG1322 # Protein_GI_number: 15834016 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 470 6 475 475 803 99.0 0 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS RNAQKIADRASKLYDKMRLFVDDMSAIGQSLDKVQDNYRQAMKKLSSGRGNVLAQAEAFR GLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR >gi|296918652|gb|GG773048.1| GENE 18 18426 - 19193 767 255 aa, chain + ## HITS:1 COG:BH2137 KEGG:ns NR:ns ## COG: BH2137 COG1414 # Protein_GI_number: 15614700 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 41 247 34 248 251 112 29.0 5e-25 MAETSSTTAGAQTLLRGLAVLNAVYNGCHDLKSIGEFTGTTRSTTHRLVTVLVEQRYLRH VPTQGYQLGAKLIEFGARALESTSLYEIAQPVLQRLARYTLDTVHLGIVEGDEVLYLEKI NSQRGLEMRSRPGHRMPLAITGIGKALILNRTEEEWRTLFKTCGDETKLGAFIQNMRRYA ASGFAFDLEENEPTIRCVAAPVYNARDEIVAAISVASTTTYMSLARLEELAPYVKSCAEE ISAELGWGKHVRKDK >gi|296918652|gb|GG773048.1| GENE 19 19217 - 20221 668 334 aa, chain + ## HITS:1 COG:AGc1271 KEGG:ns NR:ns ## COG: AGc1271 COG3734 # Protein_GI_number: 15888048 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 319 29 326 329 143 32.0 5e-34 MPGAPSFIALDWGTSSLRAWRFGESPNPQEKREFPWGIMKLPSQAATREDTFHDTFLRVC SDWLAQTPCPVLACGMLGSAQGWQPAAYLPCPVTLEGLAKQLTPVIHQQQTMLHIIPGVI KEGEMPEVMRGEETQIFGAISMEPALQNAIHQGMPVLIGLPGTHAKWAVVENNTITDFRT FMTGELFDVLSRHSILGATMHPGDEPHWDAFTHGLTAAQEHHQTGLLSTLFSTRSRLLTS NLTSSSQGDYLSGLLIGHELCGLASSLLRDLPATTPIALIGSANLNSRYSQAFSHVFPDR QIHAIPNATEQGLWRIAHAAGLLSTNARECTHAI >gi|296918652|gb|GG773048.1| GENE 20 20211 - 20840 610 209 aa, chain + ## HITS:1 COG:AGc1269 KEGG:ns NR:ns ## COG: AGc1269 COG0800 # Protein_GI_number: 15888047 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 204 3 204 209 163 44.0 2e-40 MPFNTLLQKTGLVAILRGVKPDEIVAIGEKLYAAGFRLIEIPMNSPEALQSISLLRDALP KDCLVGAGTVLSVEQVVAVKEAGGQIIVMPHCDTAVIRRARALGMYCAPGVATPTEAFAA IEHGANAIKLFPAEQITPEVTKAWRAVIPQSVPMLPVGGITPETMARYLSHGANGFGLGS ALYRPGMTPEQVYENAVLFMNAWNNLNSN >gi|296918652|gb|GG773048.1| GENE 21 20865 - 21839 1089 324 aa, chain + ## HITS:1 COG:FN2103 KEGG:ns NR:ns ## COG: FN2103 COG3181 # Protein_GI_number: 19705393 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 31 322 15 307 308 181 33.0 2e-45 MIKHLTLPKKMAAMVLLAGAALSIAPVQAASYPTKQIELVVPYAAGGGTDLVARAFADAA KNHLPVSIGVINKPGGGGAIGLSEIAAARPNGYKIGLGTVELTTLPSLGMVRFKTSDFKP IARLNADPAAITVRADAPWNSYEEFMTYAKANPGKVRIGNSGTGAIWHLAAAALEDKTGA KFSHVPYDGAAPAITGLLGGHIEAVSVSPGEVINHVNGGKLKTLVVMADERMKTMPDVPT LKEKGVDLSIGTWRGLIVSQKTQQDVVDVLAKAAKETAEEPAFQDALQKLNLNYAWLDAA SFQTQISEQEKYFDELLTRLGLKK >gi|296918652|gb|GG773048.1| GENE 22 21856 - 22362 300 168 aa, chain + ## HITS:1 COG:no KEGG:APECO1_2628 NR:ns ## KEGG: APECO1_2628 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 168 1 168 168 259 100.0 3e-68 MNTKQSVAQLAVPHRKRLSSTMVVALLLCVVAGAVMINAADFPATAIETDPGASAFPTFY ACALIVLAVLLVIRDLLQAKPASCANAQEKPAFRKTATGIAATAFYIVAMSYCGYLITTP VFLIVIMTLMGYRRWVLTPGIALLLTAILWLLFVEALQVPLPVGTFFE >gi|296918652|gb|GG773048.1| GENE 23 22375 - 23865 1454 496 aa, chain + ## HITS:1 COG:BH2009 KEGG:ns NR:ns ## COG: BH2009 COG3333 # Protein_GI_number: 15614572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 19 496 16 493 504 385 46.0 1e-106 MFESELLTQGFSTLLNNPQALLFATFGVMLGIVIGALPGLTATMGVAILLPFTYGMEPVS GLLMICGVFFGGVYGGSITAILLKIPGTPAAAATAIDGYELTKQGKAGLALSAATFSSFS GGTLSIIVLMFLSPVLASWALKFSASESFALATFGLSIIASISGESLIKGLIAGVGGLLI ATIGLDPMGGFPRFTGGFVELMNVPFIPVMIGLFAASEAFRSMEQNQQIRRGAKVAIGSL LLPWQTLRRIALTILRSSGLGVFIGMIPGAGADIAAFVAYNETRRFSKTPENFGKGEIKA VASCEAGANGCTGGALLPMLTLGIPGDAVTAIMLGALTLQGMQPGPLMFTDHGDMVYTLF VGMIFCYFMLLVLGLLSLKVIGNVVKIPGNILTPMILALCVVGTYALNNSLFDVGIMLIA GVVGYFMQKGGYPASPVVLALIMGPMAESNFRRALSLSGGSLDFLYTRPITLALLTLAAF TLLTPIIRKIMRLRRQ >gi|296918652|gb|GG773048.1| GENE 24 23935 - 24699 982 254 aa, chain - ## HITS:1 COG:udp KEGG:ns NR:ns ## COG: udp COG2820 # Protein_GI_number: 16131680 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Escherichia coli K12 # 1 253 1 253 253 489 100.0 1e-138 MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKLASHREFTTWRAELDGK PVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGAS LHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSDTFYPGQERYDTYSGRVVRHF KGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKQTESH AVKIVVEAARRLLK >gi|296918652|gb|GG773048.1| GENE 25 24961 - 25770 724 269 aa, chain + ## HITS:1 COG:ECs4760 KEGG:ns NR:ns ## COG: ECs4760 COG0412 # Protein_GI_number: 15834014 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Escherichia coli O157:H7 # 1 269 23 291 293 538 98.0 1e-153 MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPAYHARPKQSDGPLPVVI VVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQV LADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLN SPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNA DYRPSYHAESAKDGWQRMLEWFTQYGVKK >gi|296918652|gb|GG773048.1| GENE 26 26027 - 26695 652 222 aa, chain + ## HITS:1 COG:mlr7064 KEGG:ns NR:ns ## COG: mlr7064 COG1335 # Protein_GI_number: 13475885 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Mesorhizobium loti # 1 220 7 232 233 240 53.0 1e-63 MTQSIFQAQPFELPFDPRTTALVMIDMQRDFVEAGGFGEALGNDVSLVRTAIAPCTEVLA AARQKGIMVIHTREGHRADLSDCPPAKLTRGGKTFIGEPGPMGRILVRGEAGHDIIPELY PVAGEPVIDKPGKGAFYQTDLHLILQNHGIKTLIVCGVTTEVCVTTTVREANDRGYECII PEDCVGSYFPEFQKYALEMIKAQGAIFGWVTDSKAIIAGLEG >gi|296918652|gb|GG773048.1| GENE 27 26701 - 27561 295 286 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4272 NR:ns ## KEGG: ECS88_4272 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 286 1 286 286 572 100.0 1e-162 MVQVTLCASSLGYLFPQNETQDLRLHSAFKHAVNLYSDAGTFITLLCAQTYLNLPDAARV WLPECWDWRREIAHSDPIQLTQGLLRTPRFCVALENATLWQSPFVGRMLTLEAFPLVFQH YPTMASQRLLFCLEHNVQSTLHLPDSLTHQGLAIMEHPDALERQVPQLIGFGKGLTPDGD DYLLGYLAALWLWQLPAPLADHQYRLQQAIDQHAHNTTDISRHYLERALQGHFSEPICQL LAQLVGSASAMTIASCAEQVMQFGATSGVDCLAGMLHGFRTLNTMN >gi|296918652|gb|GG773048.1| GENE 28 27656 - 29215 1263 519 aa, chain + ## HITS:1 COG:ECs0369 KEGG:ns NR:ns ## COG: ECs0369 COG0074 # Protein_GI_number: 15829623 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 504 1 505 515 343 41.0 5e-94 MKVKYKVFSNLYQDSVSLMQISAQISKLPGIQQASVVMGTPNNLEQLRDAGLGNEINASP NDLVIAVMGEEDICNEALVLAQQRLTSKPDDETDSGIKTPEKVSLEMALEAEPEANLALI SVPGDYAAAEAIKALNLGMNVMMFSDNVSIGQEKSIKTLARERQRIVMGPDCGTAIVNGI PLGFANVVKRGAIGVIGASGTGLQEVTCRIDQLGAGISQALGTGGHDLSEEIGGISMLFA LDALAQDDETRVIVLISKPPSPIVAQTILERAEACGKPVVVNFLGANPHDLARPNITAAT TLASAANIAVALLNAQPLPAVETEISCADLTMLQNACQRLPAHRQAIRGVFAGGTFCYEA QLICQQKGFSAASNTPVAGNRALANIWQSEDHTLIDMGDDDFTRGKPHPMIDPTLRNQRL LNELNDSHTAVVLFDLVLGYGASTAPASELLDQLSHIDMNNAPLLIAHVCGTEADPQIRS QQIRALQNAGVIIASSNAQAALWASTVAQTQLQKKGLNA >gi|296918652|gb|GG773048.1| GENE 29 29212 - 30636 1024 474 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4270 NR:ns ## KEGG: ECS88_4270 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 474 18 491 491 906 99.0 0 MNTLFNQPLKVVNAGLHSFADNIQHAGGSAIALNWQPPAQGDIDAGLDLASLLRHPLVEN ANQIAMTRYLEAQPMLVDVMLAKEAIPAMAEQKRILHSGPPIAWEEMCGPVKGAIIGAML YEGWATSQQDAENQINAGEIDLAPCHHYHAVGPMAGIISPSMPLWVVENKTNGHRTFSNF NEGLGKVLRFGANNDEVLNRLAWMRDELAPAMKAAIAQHGEQELKPLMAQALHMGDEVHN RNAAATGLLIKRLLPALLACSLPQEHIQRVVAFITGNDHFFLNLSMAACKAMMDAAANVP FSSMVTVMARNGVSFGIRLSGTSDRWFQAPANAVEGLFFPGFGVDDAAADLGDSAITETA GMGGFAMASSPAIVKFVGGTPADATNNSRRMQAITLGGNPAFTLPALNFAPTAAGIDARK VTDRGILPVINTGIAHKQAGVGQIGAGITTAPMACFVAAVRALAEIVAKENHHG >gi|296918652|gb|GG773048.1| GENE 30 30629 - 31585 894 318 aa, chain + ## HITS:1 COG:ECs3747 KEGG:ns NR:ns ## COG: ECs3747 COG0549 # Protein_GI_number: 15833001 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli O157:H7 # 7 316 6 308 310 255 49.0 1e-67 MVKPLAVVAVGGNALIQDEQRNSIPDQYVAVMESVQHIVDMVEAGWDLVLTHGNGPQVGF ILRRSELASNEVSPVPLDYAVGDTQGAIGYMFQKALHNELARRGINKPVIALVTQTRVSP HDDAFASPSKPIGAFLDEATAQQRQQQLGWTLMEDAGRGWRRTVPSPAPLEIIEHDTIAH LVRQGYLVIACGGGGIPVVRDGQQLKGVEAVIDKDLASALLASQLGADLLVIPTGVEKVA INFGTPQQQWLDAISVAEAQTLLREGQFGVGSMQPKVEAIVDFINASQQQGKQASGLITS PQTIKAALAHQSGTWITL >gi|296918652|gb|GG773048.1| GENE 31 31602 - 31991 455 129 aa, chain + ## HITS:1 COG:mlr7070 KEGG:ns NR:ns ## COG: mlr7070 COG0154 # Protein_GI_number: 13475889 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Mesorhizobium loti # 6 124 474 595 619 79 37.0 1e-15 MTTTLLAVNGTLMRGLELNPNMQKAGGIFVREDRTDAHYRLWSINDRHPGMIRVNEGGTH VDVEIWQLPLASFAALLMSEPAGLAIGKIKLADGSEVLGVLAENWLTEGQREITELGSWR KYTGHFHTV >gi|296918652|gb|GG773048.1| GENE 32 32017 - 33240 1248 407 aa, chain + ## HITS:1 COG:BH1882 KEGG:ns NR:ns ## COG: BH1882 COG1457 # Protein_GI_number: 15614445 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Bacillus halodurans # 14 395 27 419 445 146 28.0 8e-35 MRKKEENLNTASGLRIAMILLGIAVTPVLLSSSSLGNQLSSGSLISVVLLGGVILTLLSA ITISVGEKARLPTYGIVKYSFGEKGAIAINILMAISLFGWIAVTANMFGHSVHDLLAQHG LEVPLALLVAAGCVIFVASTAFGFAVLGKIAQVAVPVIALVLCYILYVATHTEVAVPAAI VEMNTGVAVSTVVGTIIVLVATLPDFGSFVHNRKHALIAAGVTFLVAYPLLYWAGATPSA ISGQGSLLGAMAVFGAVLPAALLLIFACVTGNAGNMFQGTLVVSTLLTRFPKWQITVALG ILSAIVGSMDIMAWFIPFLLFLGIATPPVAGIYIADFFLYRRNGYQESVLAQESQIKVLT FAAWIIGAAVGFMTVKGLFTLTTIPSVDSILVACIAYAILSRASQHR >gi|296918652|gb|GG773048.1| GENE 33 33318 - 34223 696 301 aa, chain + ## HITS:1 COG:ECs2368 KEGG:ns NR:ns ## COG: ECs2368 COG0583 # Protein_GI_number: 15831622 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 4 297 3 296 310 193 34.0 4e-49 MFISDETLRVIHLVARHQSITTAAEQLNKVPSAISYTIKKAEESLGVELFIRKGRYIELS PAGSYFIEHSKTILGDLEALKRNTVLIHDGIERELTIAVNNIIPGDLLVAFIRDFERQFT STTLTVDLEVYNGCWDALYSKRADLVYGAPHAVPSSEGIISEPVGQMEWDFVVSPLHPLA AKRHPLENSELRHYPAVCIRDTSVNFPPMQAWLLEGQKPIFVPDFATAIALIEQNVGIGY IPHHLALPLLNSGKLLKKPMREHKHATKLFLAARSDGMGKACQWCIEYLRNPQLMTQFVF N >gi|296918652|gb|GG773048.1| GENE 34 34424 - 35269 748 281 aa, chain + ## HITS:1 COG:BH2675 KEGG:ns NR:ns ## COG: BH2675 COG1737 # Protein_GI_number: 15615238 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 10 253 15 259 287 119 28.0 5e-27 MNNITVKSLIQSNYPTLHQAEKKVADYILSHAHEVVNYSVTELSEKSHASEATIVRTCKK LGYQGYYHLKIALAKEVINPDNSYPDNTDFTDITSLATFLLKKQAEDLIQSTQFFNAEVL ESILKLLANCDTIFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSMGKRDL AIGISNSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAVSDKIFFEAFD STRVPAMGVIDMLVLLFMYKNKAHYEKYRTREEFLGSRFKG >gi|296918652|gb|GG773048.1| GENE 35 35299 - 37296 2101 665 aa, chain - ## HITS:1 COG:YPO0926 KEGG:ns NR:ns ## COG: YPO0926 COG0021 # Protein_GI_number: 16121231 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Yersinia pestis # 6 663 7 663 664 985 70.0 0 MNSQLLANAIRMLSVDAIQKANSGHPGAPMGMADIAEVVWRRHLRHNPKNPQWFNRDRYI QSNGHGSMLIYALLHLTGYDLSMDDIRDFRQLHSRTPGHPEYGYTPGVETTTGPLGQGVA NAVGMAIAEKALAAEFNKPGFNIVDHHTWLFLGDGCLMEGISHEACGLAGTLKLGNLIAI WDDNGISIDGHVEGWFAEDTAARFRAYGWHVIEGVDGHDPEEVDAAVREAKSVTDKPSLL CCKTIIGFGSPNKANSHDCHGSALGADEVALVRERLQWPYAPFEIPGEIYAAWDATEKGA QVQQEWDALFADYAKQWPELAAEFTRRMKGDLPAGWAENMQKYVHDLQSHPAALATRQVS QKCLNHFADMLPELMGGSADLSPSNLTRHQKSVDFTGENPAGNYISYGVREFGMSAIMNG LALHGGFIPYGGTFLMFMEYARNALRMAALMKIRSVFVYTHDTIGLGEDGPTHQPVEQLA SLRLTPNMETWRGCDQVEVAVAWQQAIERKDGPTSLVLTRQPLAQQPRTAAQLAEIARGG YVLSDCDGQPEMILISAGSEIELVVSAAKALTEEGRKVRVVSMPCTERFDNQDAAYKESV LPKAVRKRLAVEASIAGFWERYVGLDGKVIGMTSFGESAPANVLFKHFGFTPENVLAQAR ELLNS >gi|296918652|gb|GG773048.1| GENE 36 37347 - 38855 1358 502 aa, chain - ## HITS:1 COG:BS_ptsG_1 KEGG:ns NR:ns ## COG: BS_ptsG_1 COG1263 # Protein_GI_number: 16078453 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus subtilis # 11 400 6 424 436 393 52.0 1e-109 MSKKITSLFNFKKLQKFSSALMLPIAILPAAGLILAIGISFNIELLANCGGLIFANLPLL FCVGIVIGLTGDGSSSLSAIISYMIMNATMGTQLGITAESVAASNGDYAMILGVPTLQTG VFGGLIVAIFVYLLYTRFHNIELPQFLGFFGGKRFVPIITAVAAIIVGYLLPWLWIPVQK GLASLSTLVTSGHNANFAAFIYAVGERSLIPFGLHHIWNVPFYYNFGDYMTKSGQLVTGD IPVFFAQLRDGVPLTAGLFMTGRFPIMMFALPAAALAMYQEAKPERKALIKGLLLSGALT TFVTGITEPLEYAFLFAAPVLYIIHIFLYATSFVLMNILNVHIGHPFAGGLIDFVLNGVM PNRTPWYLVFLAGAGYAAIYYTVFRVLIRKLNLKTPGREDEEIAVATTLTREERPYQIIE AVGGFDNIEDVDACATRLRLALVDDKKVNEKRLKELGAAGLVKLGDGGVQVIFGGKSQIL RDEIKTVMSRPRPTEMTVACAN >gi|296918652|gb|GG773048.1| GENE 37 38897 - 39454 546 185 aa, chain - ## HITS:1 COG:BS_yckF KEGG:ns NR:ns ## COG: BS_yckF COG0794 # Protein_GI_number: 16077414 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Bacillus subtilis # 1 185 1 185 185 140 38.0 9e-34 MDAKLYITEIINELTFVKDSIREDDCTKLIDAIQQSQRVFCYGLGRAGFSMKAFTMRLMH MGKEVYFLTETITPNFGPGDLFIVSSASGETAQLVALAKKARQFGGAVAVLTTNRHATIT EFVDVIVQINAPSKNQKDSVFRSAQPMASLYEQALLVIADALVMKMAAESGAPESELFKR HANLE >gi|296918652|gb|GG773048.1| GENE 38 39939 - 40232 190 97 aa, chain + ## HITS:1 COG:yhhZ_1 KEGG:ns NR:ns ## COG: yhhZ_1 COG3157 # Protein_GI_number: 16131314 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli K12 # 1 97 1 97 170 152 77.0 2e-37 MSDEIYLTITGEQQGCISSRCGTSASIGNRWQIGHEDEIFAFSLSNSITNTGKGSQLHGL SFCKLIDKSSPLLINAINNNEQLFMEFDFYRINRFGR >gi|296918652|gb|GG773048.1| GENE 39 40658 - 41071 205 137 aa, chain + ## HITS:1 COG:no KEGG:ECP_4026 NR:ns ## KEGG: ECP_4026 # Name: not_defined # Def: protein of unknown function (DUF796); region: DUF796; cl01226 # Organism: E.coli_536 # Pathway: not_defined # 1 137 241 377 377 293 99.0 1e-78 MESFEHFGARGAVSGRPFNPDLAGGPIENLTIDGVTINREGIAIVEKHISRFDHDPANDV MISRLKKIANKELLPEKYDLNYYTHECREYQRYCNLGWETGEPNGLDGYELWNNAHTATL EDFKIKDTDLFHPDAKK >gi|296918652|gb|GG773048.1| GENE 40 41068 - 41325 244 85 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4259 NR:ns ## KEGG: ECS88_4259 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 85 1 85 85 160 100.0 1e-38 MTITIVEFNVLKVMAEKDIDWSWMVLDRTLAIRNIPGFGNVANIVTKLVNHGLVDIVNGE GNSKPRYRVSQYGLNLIKEQQDNLF >gi|296918652|gb|GG773048.1| GENE 41 41400 - 41645 82 81 aa, chain + ## HITS:1 COG:no KEGG:ECP_4024 NR:ns ## KEGG: ECP_4024 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 81 1 81 81 140 100.0 2e-32 MITKNELNVLNVMTEKDINWNWMNLDRTLSIRQIPGFGNVVNIVNKLANEGLVIIEDSGH KSMPHYHVSEKGYNLVQRENK >gi|296918652|gb|GG773048.1| GENE 42 41814 - 44075 2762 753 aa, chain - ## HITS:1 COG:metE KEGG:ns NR:ns ## COG: metE COG0620 # Protein_GI_number: 16131678 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Escherichia coli K12 # 1 753 1 753 753 1521 99.0 0 MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLP VGDFAWYDHVLTTSLLLGNVPQRHQNNDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFN TNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHKVKPVLLGPITYLWLGKVKGEQFDR LSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLNAYKPAYDALQGQVKLLL TTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRAD LTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCHELALLR DALNSGDTAALAEWSAPIQARRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRAR FKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVL VHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYA QSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDE PALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDAD VITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERL WVNPDCGLKTRGWPETRAALANMVQAAQNLRRG >gi|296918652|gb|GG773048.1| GENE 43 44193 - 45146 669 317 aa, chain + ## HITS:1 COG:ECs4758 KEGG:ns NR:ns ## COG: ECs4758 COG0583 # Protein_GI_number: 15834012 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 613 99.0 1e-175 MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTP QGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQWLTPALENFHKNWPQVEM DFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFDYEVRLVLAPDHPLAAKTRIT PEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSVDNTLLLIQMVAARMGIAALPHW VVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQPITEAFIRSARNHACDHLPFVKSAE RPTYDAPTVRPGSPARL >gi|296918652|gb|GG773048.1| GENE 44 45034 - 45933 1049 299 aa, chain - ## HITS:1 COG:ECs4757 KEGG:ns NR:ns ## COG: ECs4757 COG0697 # Protein_GI_number: 15834011 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 539 99.0 1e-153 MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFLPFLRTRGNSLKTVGLY MLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIYDIMSKRRLRWGYAFSALL AVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKRLMETRPMPQHNAFAWFYLGA FLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIGYFMWNYGATQVDAGTLGIMNNM HVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVHRKWVAPRSSQTADDRRRDCALNE >gi|296918652|gb|GG773048.1| GENE 45 46009 - 46809 839 266 aa, chain - ## HITS:1 COG:Z5347 KEGG:ns NR:ns ## COG: Z5347 COG0561 # Protein_GI_number: 15804418 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 266 40 305 305 555 98.0 1e-158 MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKS YMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEE MRFFKEAVFKYALYEPGLLEPEGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFSTLT CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGSAHQRLKD LHPELEVIGTNAEDAVPHYLRKLYLS >gi|296918652|gb|GG773048.1| GENE 46 46817 - 47839 661 340 aa, chain - ## HITS:1 COG:ECs4755 KEGG:ns NR:ns ## COG: ECs4755 COG2267 # Protein_GI_number: 15834009 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Escherichia coli O157:H7 # 1 340 1 340 340 698 99.0 0 MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVRFVRFRAQHHDRVVVIC PGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLGDPHLGHVNRFNDYVDDLAAF WQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIALTAPMFGIVIRMPSFMARQI LNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRYRRNLRFYADDPTIRVGGPTYHW VRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNRMHDRFCELRTAAGHPVEGGRPLVI KGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSGNRSTEV >gi|296918652|gb|GG773048.1| GENE 47 47950 - 48570 508 206 aa, chain + ## HITS:1 COG:ECs4754 KEGG:ns NR:ns ## COG: ECs4754 COG1280 # Protein_GI_number: 15834008 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 352 100.0 3e-97 MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVG LGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNL TNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPK QMKALNKIFGSLFMLVGALLASARHA >gi|296918652|gb|GG773048.1| GENE 48 48631 - 49251 720 206 aa, chain - ## HITS:1 COG:ECs4753 KEGG:ns NR:ns ## COG: ECs4753 COG1280 # Protein_GI_number: 15834007 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 362 99.0 1e-100 MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGL HLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEVVSAPAPQVELAKSGRSFLKGLL TNLANPKAIIYFGSVFSLFVGDNVGTTERWGIFALIIVETLAWFTVVASLFALPQMRRGY QRLAKWIDGFAGALFAGFGIHLIISR >gi|296918652|gb|GG773048.1| GENE 49 49315 - 51150 1904 611 aa, chain - ## HITS:1 COG:ECs4752 KEGG:ns NR:ns ## COG: ECs4752 COG0514 # Protein_GI_number: 15834006 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Escherichia coli O157:H7 # 1 611 1 611 611 1255 100.0 0 MNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQ IPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRL LYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFM ALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKS GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGM GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG QLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQI ALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIH LGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAK LRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMAL IRAHVDGDDEE >gi|296918652|gb|GG773048.1| GENE 50 51269 - 52138 922 289 aa, chain - ## HITS:1 COG:ECs4751 KEGG:ns NR:ns ## COG: ECs4751 COG2829 # Protein_GI_number: 15834005 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 567 98.0 1e-162 MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYI IYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQL SNSDESSPFRETNYEPQLFLGFATDYNFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYT RLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGY GGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF >gi|296918652|gb|GG773048.1| GENE 51 52303 - 52770 464 155 aa, chain + ## HITS:1 COG:ECs4750 KEGG:ns NR:ns ## COG: ECs4750 COG2050 # Protein_GI_number: 15834004 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli O157:H7 # 1 155 7 161 161 295 99.0 2e-80 MSAVLTAEQALKLVGEMFVYHIPFNRALGMELERYEKEFAQLAFKNQPMMVGNWAQSILH GGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGERFTAT SSLLRAGNKVAVARVELHNEEQLYIASATATYMVG >gi|296918652|gb|GG773048.1| GENE 52 52822 - 53712 1010 296 aa, chain + ## HITS:1 COG:ECs4749 KEGG:ns NR:ns ## COG: ECs4749 COG2962 # Protein_GI_number: 15834003 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 510 99.0 1e-144 MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQW SYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF LGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGML IETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFTFIWVALAIFVMDAIYTQRRTSK >gi|296918652|gb|GG773048.1| GENE 53 54023 - 54871 227 282 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4244 NR:ns ## KEGG: ECS88_4244 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 282 1 282 282 545 100.0 1e-153 MNNILGSSINMPCTLFETITLFDDFSADDMQYGDMEEQDFLSLGLSDISAKVDPYRLIKY HFPGPNSTYGAFSVPTSGTKISQSECIDILFAEMKDLAKMFSFFGQYKTLIQDLIDHFRY ENGNSFHSQELNLSFHERINKYDYNSPIRVIKECIENDISSTPTIGYRPLLLQKIKTELL SSRLNKFNDFKDNFNGLGISIHDISAQKISLLNFQKYPMGWSATIHFIAQDHFGLDVTDI KNKIYNKYRFFRIWFFLQRHKDFAFKPFFTNFNTIERIENYL >gi|296918652|gb|GG773048.1| GENE 54 54937 - 55365 138 142 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4243 NR:ns ## KEGG: ECS88_4243 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 142 24 165 165 273 99.0 1e-72 MRPVQILYTYSDAGNSVFLVVDHLPWTDSDKINWYLKHQDEIKSQNPLPEDSWHTWYVID IGNGFTDYKKYIEGPYEDLYCFPTIKSNDNCIVKNYLMVINEYPYRNTHFFIADNNEYQL TQENKIERVFNPHDFEKDNFQQ >gi|296918652|gb|GG773048.1| GENE 55 55401 - 56351 1221 316 aa, chain - ## HITS:1 COG:ECs4746 KEGG:ns NR:ns ## COG: ECs4746 COG0598 # Protein_GI_number: 15834000 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 607 100.0 1e-174 MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQSELGQSLATRPELEDIE ASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLFTLRERELPAFRLYRMRAR SQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSRVIMEGHQGDEYDEALSTLAE LEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQAREILRDIESLLPHNESLFQKVNFL MQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSYGMNFEFMPELKWSFGYPGAIIFMI LAGLAPYLYFKRKNWL >gi|296918652|gb|GG773048.1| GENE 56 56721 - 57485 722 254 aa, chain + ## HITS:1 COG:ECs4745 KEGG:ns NR:ns ## COG: ECs4745 COG3698 # Protein_GI_number: 15833999 # Func_class: S Function unknown # Function: Predicted periplasmic protein # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 505 96.0 1e-143 MAHRLFIGKGMITLNLKRIFLTLTLLPLFAVAADDCAPSDPTLTVQAYTVNPQTERVKMY WQKANGEAWGTLHALLADINSQGQVQMAMNGGIYDESYAPLGLYIENGQQKVALNLASGE GNFFIRPGGVFYVAGDKVGIVRLDAFKTSKEIQFAVQSGPLLMENGVINPRIHPNVASRK IRNGVGINKHGNAVFLLSQQATNFYDFACYAKAKLNVEQLLYLDGTISHMYMKGEAIPWQ RYPFVTMISVEQKG >gi|296918652|gb|GG773048.1| GENE 57 57568 - 58470 801 300 aa, chain + ## HITS:1 COG:ECs4744 KEGG:ns NR:ns ## COG: ECs4744 COG1912 # Protein_GI_number: 15833998 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 300 1 300 300 597 98.0 1e-171 MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDGAVSAMKGVAFGVDHNLKIFDLTHE IPPYNIWEGAYRLYQTASYWPQGSVFVSVVDPGVGTDRKSVVLKTKNGQYFVSPDNGTLT LVAESLGIESVRQIDEKTNRLKGSEKSYTFHGRDVYAYTGARLASGAITFEQVGPELPAK VVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDELLNQAGIKLNDTLCVTISEGSQQ KYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNMDNFAQKHQVASGADWNIDVKKCAK >gi|296918652|gb|GG773048.1| GENE 58 58515 - 60506 2054 663 aa, chain - ## HITS:1 COG:ECs4743 KEGG:ns NR:ns ## COG: ECs4743 COG0210 # Protein_GI_number: 15833997 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 663 58 720 720 1320 100.0 0 MAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSE DQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAY QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL ETV >gi|296918652|gb|GG773048.1| GENE 59 60783 - 61499 533 238 aa, chain - ## HITS:1 COG:yigB KEGG:ns NR:ns ## COG: yigB COG1011 # Protein_GI_number: 16131664 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli K12 # 1 238 1 238 238 483 99.0 1e-136 MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHPALRSFQNEDLQRLRQA VREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHD TLKQLAKKWPLVAITNGNAQPELFGLGHYFEFVLRAGPHGRSKPFSDMYFLAAEKLNVPI GEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI >gi|296918652|gb|GG773048.1| GENE 60 61499 - 62395 919 298 aa, chain - ## HITS:1 COG:xerC KEGG:ns NR:ns ## COG: xerC COG4973 # Protein_GI_number: 16131663 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerC # Organism: Escherichia coli K12 # 1 298 1 298 298 586 99.0 1e-167 MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIIHFASENGLQSWQQCDVTMVRNFA VRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVSAPKAPRHLPKNIDVDDMN RLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMGKGSKERRLP IGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPH KLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK >gi|296918652|gb|GG773048.1| GENE 61 62392 - 63099 702 235 aa, chain - ## HITS:1 COG:yigA KEGG:ns NR:ns ## COG: yigA COG3159 # Protein_GI_number: 16131662 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 235 1 235 235 443 99.0 1e-124 MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA VGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLARWIERV >gi|296918652|gb|GG773048.1| GENE 62 63096 - 63920 781 274 aa, chain - ## HITS:1 COG:ECs4739 KEGG:ns NR:ns ## COG: ECs4739 COG0253 # Protein_GI_number: 15833993 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Escherichia coli O157:H7 # 1 274 2 275 275 568 100.0 1e-162 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL >gi|296918652|gb|GG773048.1| GENE 63 63957 - 64160 192 67 aa, chain - ## HITS:1 COG:Z5325 KEGG:ns NR:ns ## COG: Z5325 COG5567 # Protein_GI_number: 15804397 # Func_class: N Cell motility # Function: Predicted small periplasmic lipoprotein # Organism: Escherichia coli O157:H7 EDL933 # 1 67 1 67 67 109 100.0 1e-24 MKNVFKALTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVETQTQSTVPDKNDRATGD GPSQVNY >gi|296918652|gb|GG773048.1| GENE 64 64349 - 65164 461 271 aa, chain + ## HITS:1 COG:no KEGG:c4728 NR:ns ## KEGG: c4728 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 271 11 281 499 536 100.0 1e-151 MHYRNVVCLLSCSLFLSSAWGCRLDEPEHNIYQKQGKGVVYLRPYEKTNLSLPQINYKRL RLLPNLLIDPTKLEDWETVPPATNLMTDVVYSGANATLPHYSYYSDGRAILYAGEIVQNP PGTPPVDISSFQAWGDFAADKYSLYYEGKRTDSNQQLNRRTLRQVEFNPQWKPDWLGLIL RDKHYLYANGQRLDDPDTFTVLAQKSWDQRGKFSTAFNPCLPAPFGPWDTLARTQTKIMI NGEQLDADPDTFSVVRWMPGSLFTWRDKNGL >gi|296918652|gb|GG773048.1| GENE 65 65249 - 65818 279 189 aa, chain + ## HITS:1 COG:no KEGG:c4728 NR:ns ## KEGG: c4728 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 189 311 499 499 386 98.0 1e-106 MFWRKGPACKQEELSGLDPEQFHPISDAVAQYQDSLYTIIETESGDRKLEIVKLDDPNLI INKRFNAGKRHGYLLTRAEGWVNHSSLHVFESDGPLILLDNRSPDEREAHLNDHPFLRRW YARDNRYVYSFDGAQLWRYRTADPKQVRLIWKEQHSGYGYGVNYKTGYLDGKITDDGEFI PAPRNEATK >gi|296918652|gb|GG773048.1| GENE 66 65815 - 67131 317 438 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4231 NR:ns ## KEGG: ECS88_4231 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 438 1 438 438 897 100.0 0 MNGQIITVALILLGNTFLTPPVQAIGFDYYNDHSVMSYGKGYWGDKKIIAQFPEMNRADL RLVKNISGKTGYIPSDEISIENEEYHWVTDGHVILWRGKIVSNPPGTPTVDIASFQAMGR FAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNSTTLVDSKNLYLSGRRQGSSSNVTV LEKRWWGINPRLMSVNRNLYSNDLLIRSGQNIYLNGAHLTANADSFEIIRWIPHSLLVFR DNKGLHRYPFGQLSGKAIPVDDDVSFEVGESRVRWRKQLTPDRQWSKWIDLPGIEPEQFH LITDNIAQYKDRLYVTKLSTFGEDQLEIIPLDTPDLVIDDSFNSGKQHAYFIRQLRSRKS VQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPSHCPAKTRVREENVREIHNSDIIIP VTDESCRNAAADGQTLKP >gi|296918652|gb|GG773048.1| GENE 67 67179 - 67499 506 106 aa, chain + ## HITS:1 COG:STM3943 KEGG:ns NR:ns ## COG: STM3943 COG1965 # Protein_GI_number: 16767214 # Func_class: P Inorganic ion transport and metabolism # Function: Protein implicated in iron transport, frataxin homolog # Organism: Salmonella typhimurium LT2 # 1 106 1 106 106 191 93.0 2e-49 MNDSEFHRLADQLWLTIEEHLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQV WLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR >gi|296918652|gb|GG773048.1| GENE 68 67539 - 70085 2264 848 aa, chain - ## HITS:1 COG:ECs4736 KEGG:ns NR:ns ## COG: ECs4736 COG3072 # Protein_GI_number: 15833990 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate cyclase # Organism: Escherichia coli O157:H7 # 1 848 1 848 848 1770 99.0 0 MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHYHHPLMPGYLDGNVPKG ICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMGSTSSVGQSCSSDLDIWVC HQSWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENRFRHNESGSLGGEDCGSTQHI LLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTLYAQGVLTPNEWLDLGGLSSLSA EEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYPNPRLLAKDIKQRLHDGEIVSFGLD PYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVCEKLSRERACVGWRREVLSQLVKEWEW DDARLAMLDNRANWKIDQVREAHNELLDAMMQSYRNLIRFARRNNLSVSASPQDIGVLTR KLYAAFEALPGKVTLVNPQISPDLSEPNLTFIYVPPGRANRSGWYLYNRAPNIESIISHQ PLEYNRYLNKLVAWAWFNGLLTSRTRLYIKGNGIVDLPKLQEMVADVSHHFPLRLPAPTP KALYSPCEIRHLAIIVNLEYDPTAAFRNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRN SWNEVRTLHFNGEQSMIEALKTILGKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSE CIELRLSSTRQETGRFKALRVSGQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSV QVETNHVKLPAVVDGFASEGIIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELV RDVSRFYSSSHDRFTYGSSFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQEHDA PLLQQYFS >gi|296918652|gb|GG773048.1| GENE 69 70472 - 71413 1110 313 aa, chain + ## HITS:1 COG:ECs4735 KEGG:ns NR:ns ## COG: ECs4735 COG0181 # Protein_GI_number: 15833989 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Escherichia coli O157:H7 # 1 313 8 320 320 590 99.0 1e-168 MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKG LFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDALP AGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLE SRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEG GCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAR EILAEVYNGDAPA >gi|296918652|gb|GG773048.1| GENE 70 71410 - 72150 481 246 aa, chain + ## HITS:1 COG:ECs4734 KEGG:ns NR:ns ## COG: ECs4734 COG1587 # Protein_GI_number: 15833988 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 469 98.0 1e-132 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE LQNIAGKRALILRGNGGRELIGDSLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT TVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAKLARELGWQDIKVADNADNDA LLRALQ >gi|296918652|gb|GG773048.1| GENE 71 72172 - 73365 1304 397 aa, chain + ## HITS:1 COG:hemX KEGG:ns NR:ns ## COG: hemX COG2959 # Protein_GI_number: 16131655 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Escherichia coli K12 # 1 397 1 393 393 581 97.0 1e-166 MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAIAIALAAGVGLYGWGKQ QAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAVQLEQANRQQETLAKQLDEVQQ KVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAALLKSADASLADMNDPSLITV RRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRLADNDSDGSPMDSDGEELSSSIS EWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQDIYLRENIRSRLLVAAQAVPRHQEE TYRQALENVSTWVRAYYDTDDATTKAFLDEVDQLSQQNISMDLPETLQSQAMLEKLMQTR VRNLLAQPAAGTTEAKPAPAPAPAPQADAPAAAPQGE >gi|296918652|gb|GG773048.1| GENE 72 73368 - 74564 1367 398 aa, chain + ## HITS:1 COG:ECs4732 KEGG:ns NR:ns ## COG: ECs4732 COG3071 # Protein_GI_number: 15833986 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Escherichia coli O157:H7 # 12 398 12 398 398 728 100.0 0 MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEW LLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVN YLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRVRLQLARNENHAARHGVDKLL EVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQAR ADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLL PIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPD AYDYAWLADALDRLHKPEEAAAMRRDGLMLTLQNNPPQ >gi|296918652|gb|GG773048.1| GENE 73 74846 - 75133 397 95 aa, chain + ## HITS:1 COG:STM4528 KEGG:ns NR:ns ## COG: STM4528 COG2929 # Protein_GI_number: 16767772 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 95 1 95 95 158 85.0 2e-39 MPMEFEWDENKAKSNRVKHGIRFEDAVLLFDDPQHLSQQERIENGEYRWQTIGLVYGIVV ILVAHTIRFESGNEIIRIISARKADRKERNRYEHG >gi|296918652|gb|GG773048.1| GENE 74 75120 - 75422 378 100 aa, chain + ## HITS:1 COG:STM4529 KEGG:ns NR:ns ## COG: STM4529 COG3514 # Protein_GI_number: 16767773 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 100 1 100 100 151 85.0 3e-37 MSMVKHKRGTSSTLDVQHEAELKALANKSDEDIDYSDIPPSSDEQWSNAERGKFYRPLKT QASVRIDADVMEWLKRPGKGYQTRLNAILREAMLRDQNKK >gi|296918652|gb|GG773048.1| GENE 75 75486 - 76442 1032 318 aa, chain - ## HITS:1 COG:STM4530 KEGG:ns NR:ns ## COG: STM4530 COG0523 # Protein_GI_number: 16767774 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Salmonella typhimurium LT2 # 1 318 1 318 318 586 91.0 1e-167 MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTL TNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQR YLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVAGEAEKLRERLARINARA PVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIADKQNDISSIVVELDYPVDISEV SRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGVQRLYSADWDRPWGDEKPHSTMVFI GIQLPEEEIRAAFAGLRK >gi|296918652|gb|GG773048.1| GENE 76 76453 - 76656 270 67 aa, chain - ## HITS:1 COG:ECs5312 KEGG:ns NR:ns ## COG: ECs5312 COG2879 # Protein_GI_number: 15834566 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli O157:H7 # 1 67 1 67 67 127 100.0 4e-30 MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDG KGGMRCC >gi|296918652|gb|GG773048.1| GENE 77 76706 - 78856 2669 716 aa, chain - ## HITS:1 COG:ECs5313 KEGG:ns NR:ns ## COG: ECs5313 COG1966 # Protein_GI_number: 15834567 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 716 6 721 721 1340 99.0 0 MDTKKIFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASVSVYLVAYRYYSLYIAQ KVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTL WLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPVPGTIALFGCFLIMIIILAVL ALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPGRVGEVSVIGIVLLVASIYFGGV IAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLALGI VVLNPELKMPAMTQYIDGTGPLWKGALFPFLFITIACGAVSGFHALISSGTTPKLLANET DARFIGYGAMLMESFVAIMALVAASIIEPGLYFAMNTPPAGLGITMPNLHEMGGENAPII MAQLKDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKV LPMADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGT AGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVT VVPAVWLLICTTWALGLKLFSTNPQMEGFFYMASQYKEKIANGTDLTAQQIANMNHIVVN NYTNAGLSILFLIVVYSIIFYGFKTWLAVRNSDKRTDKETPYVPIPEGGVKISSHH >gi|296918652|gb|GG773048.1| GENE 78 79233 - 80897 1730 554 aa, chain + ## HITS:1 COG:ECs5315 KEGG:ns NR:ns ## COG: ECs5315 COG0840 # Protein_GI_number: 15834569 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 # 1 554 1 554 554 895 99.0 0 MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQTIRQQQSTLNGSWVAL LQTCNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAEKNWADYEALPRDPRQSTA AAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQDGFEKQYVAYMEQNDRLHDI AVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASLVAPMNRLIDSIRHIAGGDLVKP IEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANAIYSGASEIATGNNDLSSRTEQQAA SLEETAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDISTSSQK IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSL IEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEM DRVTQQNAALVEESAAAAAALEEQASRLTEAVAVFRIQQQQQQQRETSAVVKTVMPAAPR KMAVADSGENWETF >gi|296918652|gb|GG773048.1| GENE 79 80946 - 81806 825 286 aa, chain - ## HITS:1 COG:yjiZ KEGG:ns NR:ns ## COG: yjiZ COG0477 # Protein_GI_number: 16132177 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 286 168 453 453 549 99.0 1e-156 MGFFNAASTIGVAVSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNREHVELTA VEQAYLNAGSVNARRDPLSFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTA YNLDLKSTGLMAAIPFLFGAAGMLVNGYVTDWLVKGGMAPIKSRKICIIAGMFCSAAFTL VVPQATTSMTAVLLIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFASFICASFA PIITGFIVDTTHSFRLALIICGCVTAAGALAYIFLVRQPINDPRKD >gi|296918652|gb|GG773048.1| GENE 80 81865 - 82305 254 146 aa, chain - ## HITS:1 COG:ECs5316 KEGG:ns NR:ns ## COG: ECs5316 COG0477 # Protein_GI_number: 15834570 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 115 1 115 453 226 100.0 1e-59 MEKENITLDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAMLLLFFAAVINYLDRSS LSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLDRKGPRLMLGLGMFSGHCS RQCLAWCTALRSSCWCVSVWELVKRR >gi|296918652|gb|GG773048.1| GENE 81 82520 - 83434 560 304 aa, chain - ## HITS:1 COG:ECs5317 KEGG:ns NR:ns ## COG: ECs5317 COG1802 # Protein_GI_number: 15834571 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 37 304 1 268 268 516 100.0 1e-146 MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTTVRHILSHLRECGVLTQ VGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMINQRQLRPGETFSELQLARAAG VSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQLFELREMLETHSLQHFLNLPD HDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHSLLLSAADNIFFDQSLEIISVIF HFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLDATLALRNHLNSAKQSMIRSINENT RYAH >gi|296918652|gb|GG773048.1| GENE 82 83573 - 84595 1041 340 aa, chain + ## HITS:1 COG:yjjN KEGG:ns NR:ns ## COG: yjjN COG1063 # Protein_GI_number: 16132179 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 340 6 345 345 670 99.0 0 MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVL GHEICGEIVGLGKNIADLKNGQQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQDGGF SEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAIAPGEQVLVVGAGPIGLGAAA IAKADGAQVVVADTSPARREHVATRLELPVLDPSAEDFDAQLRAQFGGSLAQKVIDATGN QHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKVGRLMV EGKITADMMLTHRYPFATLAETYERDVINNRDLIKGVITF >gi|296918652|gb|GG773048.1| GENE 83 84732 - 87023 2219 763 aa, chain - ## HITS:1 COG:mdoB KEGG:ns NR:ns ## COG: mdoB COG1368 # Protein_GI_number: 16132180 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Escherichia coli K12 # 14 763 1 750 750 1520 99.0 0 MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNITLFASDYFTGDGINDAV LYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRRRRHHPHHFGYSLLALLLALG SVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDPKLNLVYIYGESLERTYFDNE AFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFF PQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRND WGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFVGKPNQS FSAVSCSQENIATFINKIKASPWFKDTVIVVSSDHLAMNNTAWKYLNKQDRNNLFFVIRG DKPQQETLAVKRNTMDNGATVLDILGGDNYLGLGRSSLSGQSMSEIFLNIKEKTLAWKPD IIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLA DFAPRDNFVWVDRCYKMAQLWAPELALSTDWCVSQGQLGGQQIVQHVDKTTWKGKTAFKD TVIDMARYKGNVDTLKIVDNDIRYKADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQL GDEVKIEYKHPLPKKFDLVITAKAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNP TDADTLVIVPPEPVSTNEGNILGHSPRKLGIGMVEIKVVEREG >gi|296918652|gb|GG773048.1| GENE 84 87277 - 87768 473 163 aa, chain - ## HITS:1 COG:no KEGG:S4661 NR:ns ## KEGG: S4661 # Name: yjjA # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 163 3 165 165 264 99.0 1e-69 MKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNLLS SGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLEKLGLNSEEQKEDTNYLDGI QGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGLNFIS >gi|296918652|gb|GG773048.1| GENE 85 87820 - 88557 828 245 aa, chain - ## HITS:1 COG:ECs5321 KEGG:ns NR:ns ## COG: ECs5321 COG1484 # Protein_GI_number: 15834575 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 473 100.0 1e-133 MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAALERENRAMKMQRTFNRS GIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAIC NELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDLSNVDLLVIDEIGVQTESKYE KVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVMDRMRLGNSLWVIFNWDSYRSRV TGKEY >gi|296918652|gb|GG773048.1| GENE 86 88560 - 89099 535 179 aa, chain - ## HITS:1 COG:ECs1768 KEGG:ns NR:ns ## COG: ECs1768 COG5529 # Protein_GI_number: 15831022 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Escherichia coli O157:H7 # 78 153 184 266 346 77 51.0 1e-14 MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKL ARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEE LASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPKRDVNTVSEPDSQIPPGFRG >gi|296918652|gb|GG773048.1| GENE 87 89207 - 89680 437 157 aa, chain - ## HITS:1 COG:STM4545 KEGG:ns NR:ns ## COG: STM4545 COG3610 # Protein_GI_number: 16767789 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 240 86.0 6e-64 MGVIEFLFTLAQDMILAAIPAVGFAMVFNVPVRALRWCALLGAIGHGSRMILMTSGLNIE WSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISAYTAMISAVKISQLGYSES LMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV >gi|296918652|gb|GG773048.1| GENE 88 89671 - 90495 428 274 aa, chain - ## HITS:1 COG:yjjP KEGG:ns NR:ns ## COG: yjjP COG2966 # Protein_GI_number: 16132185 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 274 4 277 277 540 98.0 1e-153 MDSHYLNNTQHVYDKGRVMQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALG MDSVESSISSNAIVLTTIKDGQCLTSTRKNQDRGINMHVVTEVQHIVILAEHHLLDYKGV EKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAVITFFASTAAMYIRQLLAQRH LHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFKGHI NTGLARWAIASLLTLATCVGVVMALTIWGLRGWV >gi|296918652|gb|GG773048.1| GENE 89 91111 - 91785 284 224 aa, chain + ## HITS:1 COG:ECs5325 KEGG:ns NR:ns ## COG: ECs5325 COG2197 # Protein_GI_number: 15834579 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 224 18 241 241 424 100.0 1e-119 MQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLI SQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLT SPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLA IHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS >gi|296918652|gb|GG773048.1| GENE 90 91797 - 92420 304 207 aa, chain + ## HITS:1 COG:ECs5326 KEGG:ns NR:ns ## COG: ECs5326 COG2197 # Protein_GI_number: 15834580 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 207 19 225 225 395 99.0 1e-110 MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS SDAGLLEAADILLCMRHCEASNVLHPY >gi|296918652|gb|GG773048.1| GENE 91 92458 - 93246 601 262 aa, chain - ## HITS:1 COG:ECs5327 KEGG:ns NR:ns ## COG: ECs5327 COG4114 # Protein_GI_number: 15834581 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 506 96.0 1e-143 MAYRSAPLYEDIIWRTHLQPQDAGLAQAVRATIAEHREHLLEFIRLDEPAPLRAMTLAQW SSPNTLSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGLMVPPLMLALLTQVKALDV TPEHFHVEFHETGRAACFWVDVCEDKNATLHSPQQRMETLISQALVPVVQALEATGEING KLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEKTLTNGEDNPLWRTVVLRDGLLV RRTCCQRYRLPDVQQCGDCTLK >gi|296918652|gb|GG773048.1| GENE 92 93387 - 93623 221 78 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C5074 NR:ns ## KEGG: UTI89_C5074 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 78 38 115 115 119 96.0 5e-26 MLQRMLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTPVMLYHKQLRHYILLPS CLALIAGIMLMIVNLNQG >gi|296918652|gb|GG773048.1| GENE 93 94325 - 95980 1719 551 aa, chain + ## HITS:1 COG:aslA KEGG:ns NR:ns ## COG: aslA COG3119 # Protein_GI_number: 16131653 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Escherichia coli K12 # 1 551 1 551 551 1097 98.0 0 MEFSFSPKLLVVAVAAALPLIASAADTPSTATARKGFAGYDHPNQYLVKPATTIADNMMP VMQHPAQDKETQQKLAELEKKTGKKPNVVVFLLDDVGWMDVGFNGGGVAVGNPTPDIDAV ASQGLILTSAYSQPSSSPTRATILTGQYSIHHGILMPPMYGQPGGLQGLTTLPQLLHDQG YVTQAIGKWHMGENKESQPQNVGFDDFRGFNSVSDMYTEWRDVHVNPEVALSPARSEYIQ KLPFSKDDVHAVRGGEQEAIADITPKYMEDLDQRWMEYGVKFLDKMAKSDKPFFLYYGTR GCHFDNYPNAKYAGSSPARTSYGDCMVEMNDIFANLYKALEKNGQLDNTLIVFTSDNGPE AEVPPHGRTPFRGAKGSTWEGGVRVPTFVYWKGMIQPRKSDGIVDLADLFPTALDLAGHP GAKVANLVPKTTFIDGVDQTSFFLGTNGQSNRKAEHYFLNGKLSAVRMDEFKYHVLIQQP YAYTQSGYQGGFTGTVMQTAGSSVFNLYTDPQESDSIGVRHIPMGVPLQTEMHAYMEILK KYPPRAQIKSD >gi|296918652|gb|GG773048.1| GENE 94 96138 - 97373 909 411 aa, chain - ## HITS:1 COG:ECs4730 KEGG:ns NR:ns ## COG: ECs4730 COG0641 # Protein_GI_number: 15833984 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli O157:H7 # 1 411 1 411 411 848 96.0 0 MQQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYHEKPVTHMDDDTLEAYVRHYIAA SETQNEVAFTWQGGEPTLLGLDFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLA ENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSALQ PLQVYDFLCDAGVEFIQFIPVVERLADETAAHAGLKLHAPGDIQGELTEWSVCPQEFGEF LVAIFDHWIKRDVGKVFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHY VYPQYRLGNMLQQTIAEMIDSPQQQAFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLD ASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASDIMQAHLMVVNK >gi|296918652|gb|GG773048.1| GENE 95 97477 - 97935 -167 152 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|157081634|gb|ABV11312.1| ## NR: gi|157081634|gb|ABV11312.1| hypothetical protein CKO_00142 [Citrobacter koseri ATCC BAA-895] # 17 59 17 58 61 66 83.0 5e-10 MHRKQKTPPPPKKKKKKKKTPPEGGGFKIGRRERIRTSDPLVPNQLRYQAALLAEILLFE FLVQFFKVVVRGGGLEPPRPPPPKKKKKKKKKKRVGGGGGGPPPPTSVRTLTPEASASTN SATFALSQLLIMGWLMGFEPTTTGITIQGSTN >gi|296918652|gb|GG773048.1| GENE 96 98184 - 99569 1453 461 aa, chain - ## HITS:1 COG:ECs4729 KEGG:ns NR:ns ## COG: ECs4729 COG1113 # Protein_GI_number: 15833983 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 461 1 461 461 806 99.0 0 MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIM RSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFP EMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVIGLGVIFFGFGNGG QSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV LWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCN SGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVAGVAVSIAILLIGSCLNYIIPNPQRVF VYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRSILFPWANYVTMAFLICVLIG MYFNEDTRMSLFVGIIFMLVVTAIYKVFGLNRHGKAHKLEE >gi|296918652|gb|GG773048.1| GENE 97 99760 - 100500 891 246 aa, chain - ## HITS:1 COG:ECs4728 KEGG:ns NR:ns ## COG: ECs4728 COG1922 # Protein_GI_number: 15833982 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Teichoic acid biosynthesis proteins # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 470 98.0 1e-132 MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAINAEKMLTIEDNAEVRE LINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMARAGKEGTQVFLVGGKPEV LAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASGAQIVTVAMGAPKQEIFMRDC RLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWLYRLLSQPSRIKRQLRLLRYLRW HYTGNL >gi|296918652|gb|GG773048.1| GENE 98 100503 - 101855 1370 450 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_4158 NR:ns ## KEGG: EcSMS35_4158 # Name: wzyE # Def: putative common antigen polymerase # Organism: E.coli_SECEC # Pathway: not_defined # 1 450 1 450 450 750 100.0 0 MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSVLVFR FDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADAPRRPLFTMNRVETNLTWVIL MGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKRFFYFFIPAMLVVYFLRQDSK AWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVLGIVGM FWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYDNIDFQGLAPIVRDFYVF IPSWLWPGRPSMVLNSANYFTWEVLNNHSGLAISPTLIGSLVVMGGALFIPLGAIVVGLI IKWFDWLYELGNRETNRYKAAILHSFCFGAIFNMIVLAREGLDSFVSRVVFFIVVFGACL MIAKLLYWLFESAGLIHKRTKSSLRTQVEG >gi|296918652|gb|GG773048.1| GENE 99 101852 - 102931 730 359 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4215 NR:ns ## KEGG: ECS88_4215 # Name: rffT # Def: 4-alpha-L-fucosyltransferase # Organism: E.coli_S88 # Pathway: not_defined # 1 359 1 359 359 753 100.0 0 MTVLIHVLGSDIPHHNRTVLRFFNDALAATSGHAREFMVAGKDDGLSDSCPALSVQFFPG KKSLAEAVIAKAKANRQQRFFFHGQFNPKLWLALLSGGIKPSQFFWHIWGADLYELSSGL RYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGELLYFPTRMDPSLNTMANDRQR EGKMTILVGNSGDRSNEHIAALRAVHQQFGDTVKVVVPMGYPPNNEAYIEEVRQAGLELF SEENLQVLSEKLEFDAYLTLLRQCDLGYFIFARQQGIGTLCLLIQAGIPCVLNRENPFWQ DMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKNTIAFFSPNYLQGWQRALAIAAGEVA >gi|296918652|gb|GG773048.1| GENE 100 102928 - 104178 1203 416 aa, chain - ## HITS:1 COG:wzxE KEGG:ns NR:ns ## COG: wzxE COG2244 # Protein_GI_number: 16131648 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 1 416 1 416 416 685 99.0 0 MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFRQLITVLGVLAGAGIFN GVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAAALISQGLFGNTDYQGLVR LVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGVLAYYVSYRLGGYEGALLGLA LIPALVVIPAVIMLIKRGVIPLSYLKPSWDNGLAGQLSKFTLMALITSVTLPVAYIMMRK LLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTEKRDITREVVKSLKFV LPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASL RFYILAEISQFTLLMVFAHWLIPAHGALGAAQAYMATYIVYFSLCCGVFLLWRRWA >gi|296918652|gb|GG773048.1| GENE 101 104180 - 105310 1219 376 aa, chain - ## HITS:1 COG:wecE KEGG:ns NR:ns ## COG: wecE COG0399 # Protein_GI_number: 16131647 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 376 1 376 376 794 99.0 0 MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTASLE MAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRPDTMNIDETLIEAAITDKT RVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET KNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA AYLWAQLEAADRINQQRLALWQNYYDALAPLAKNGRIELPSIPDGCVQNAHMFYIKLRDI DDRSALINFLKEAEIMAVFHYIPLHGCPAGERFGEFHGEDRYTTKESERLLRLPLFYNLS PVNQRTVIATLLNYFS >gi|296918652|gb|GG773048.1| GENE 102 105315 - 105989 460 224 aa, chain - ## HITS:1 COG:ECs4723 KEGG:ns NR:ns ## COG: ECs4723 COG0454 # Protein_GI_number: 15833977 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 44 224 1 181 181 321 98.0 7e-88 MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDALAPWSRVQAKIAASNTGELDALQ QLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASG RFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNATDARIGLLAGRGAGAELMQT ALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVESTAYWLYR >gi|296918652|gb|GG773048.1| GENE 103 105967 - 106848 949 293 aa, chain - ## HITS:1 COG:rffH KEGG:ns NR:ns ## COG: rffH COG1209 # Protein_GI_number: 16131645 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Escherichia coli K12 # 1 293 1 293 293 596 100.0 1e-170 MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGY FQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQGFSPKL RHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISLEEKPKQPKSNWAVTGLYFYDSKV VEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQTV EKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKTGYGQYLLELLRARPRQY >gi|296918652|gb|GG773048.1| GENE 104 106867 - 107934 1213 355 aa, chain - ## HITS:1 COG:rffG KEGG:ns NR:ns ## COG: rffG COG1088 # Protein_GI_number: 16131644 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Escherichia coli K12 # 1 355 1 355 355 733 98.0 0 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI CDRAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWTALT EDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL PTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCAA TTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLR YAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQVQDGSYQGERLGLKG >gi|296918652|gb|GG773048.1| GENE 105 107934 - 109196 1193 420 aa, chain - ## HITS:1 COG:ECs4720 KEGG:ns NR:ns ## COG: ECs4720 COG0677 # Protein_GI_number: 15833974 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 420 1 420 420 845 99.0 0 MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKT AVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILEST SPVGSTEKMAEWLAEMRPDLTFPQQVGELADVNIAYCPERVLPGQVMVELIKNDRVIGGM TPVCSARASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPFWVI DQVKAAVADCLAATDKRVSELKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVV EPNIHELPKKLTGLCTLAQLDEALATADVLVMLVDHSQFKVINGDNVHQQYVVDAKGVWR >gi|296918652|gb|GG773048.1| GENE 106 109193 - 110323 909 376 aa, chain - ## HITS:1 COG:ECs4719 KEGG:ns NR:ns ## COG: ECs4719 COG0381 # Protein_GI_number: 15833973 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Escherichia coli O157:H7 # 1 376 15 390 390 745 99.0 0 MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNI MQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGL RTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWV RDQVMSSDTLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICQALADIATTHQDIQ IVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSL GKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQ ACSRILEALKNNRISL >gi|296918652|gb|GG773048.1| GENE 107 110379 - 111425 943 348 aa, chain - ## HITS:1 COG:ECs4718 KEGG:ns NR:ns ## COG: ECs4718 COG3765 # Protein_GI_number: 15833972 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli O157:H7 # 1 348 2 349 349 681 99.0 0 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAI TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ TDYYKQRMVGNSKADAALLDEMINNIVFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK >gi|296918652|gb|GG773048.1| GENE 108 111437 - 112540 833 367 aa, chain - ## HITS:1 COG:rfe KEGG:ns NR:ns ## COG: rfe COG0472 # Protein_GI_number: 16131640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Escherichia coli K12 # 1 367 1 367 367 615 100.0 1e-176 MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQGLIPLVGGISVYAGIC FTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRATIQAAVGIVMMVFGKLYLS SLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDGLLGGLSCVSFAAIGMILWFD GQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDAGSTLIGFTVIWILLETTQGKTH PISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPDRQHIHHLIMRAGFTSRQAFVLITL AAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLYGYCIKRAWKVARFIKRVKRRLRRNRG GSPNLTK >gi|296918652|gb|GG773048.1| GENE 109 112780 - 114039 1431 419 aa, chain - ## HITS:1 COG:ECs4716 KEGG:ns NR:ns ## COG: ECs4716 COG1158 # Protein_GI_number: 15833970 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Escherichia coli O157:H7 # 1 419 1 419 419 815 100.0 0 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKRS >gi|296918652|gb|GG773048.1| GENE 110 114366 - 114695 499 109 aa, chain - ## HITS:1 COG:ECs4714 KEGG:ns NR:ns ## COG: ECs4714 COG0526 # Protein_GI_number: 15833968 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 109 19 127 127 221 100.0 2e-58 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLN IDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA >gi|296918652|gb|GG773048.1| GENE 111 114826 - 116091 1180 421 aa, chain + ## HITS:1 COG:rhlB KEGG:ns NR:ns ## COG: rhlB COG0513 # Protein_GI_number: 16131636 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli K12 # 1 421 1 421 421 862 100.0 0 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS G >gi|296918652|gb|GG773048.1| GENE 112 116227 - 117711 1719 494 aa, chain + ## HITS:1 COG:ECs4712 KEGG:ns NR:ns ## COG: ECs4712 COG0248 # Protein_GI_number: 15833966 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Escherichia coli O157:H7 # 1 494 1 494 494 960 99.0 0 MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAAGLNSENALSNEAMERG WQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQEILGCPVQVISGEEEARLI YQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSLSMGCVTWLERYFADRNLGQE NFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQALQEIMMAQGMDERITLEKLQQLK QRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIFTELNIQCMTLAGGALREGLVYGML HLTVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVAANFFDQVENEWHLEAISRDLLISACQ LHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPAQKKLLATLLLNQTNPVDLSSLHQQNAVP PRVAEQLCRLLRLAIIFASRRRDDLVPEMTLQANHELLTLTLPQGWLTQHPLGKEIIDQE SQWQSYVHWPLEVH >gi|296918652|gb|GG773048.1| GENE 113 117758 - 119779 2162 673 aa, chain - ## HITS:1 COG:ECs4711 KEGG:ns NR:ns ## COG: ECs4711 COG0210 # Protein_GI_number: 15833965 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 673 1 673 673 1319 99.0 0 MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAA REMKERVAQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKSNFSLFDDTDQLALLKEL TEGLIEDDKVLLQQLISTISNWKNDLKTPAQAAAEAKGERDRIFAHCYGLYDAHLKACNV LDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVV GDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEK RLFSELGYGTELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEK FLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKK LGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRLAEREPIAAVRDLIH GMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMM ERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGI TRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHL ANLKAMMAAKRGK >gi|296918652|gb|GG773048.1| GENE 114 119866 - 120147 256 93 aa, chain + ## HITS:1 COG:ECs4709 KEGG:ns NR:ns ## COG: ECs4709 COG0760 # Protein_GI_number: 15833963 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli O157:H7 # 1 93 1 93 93 188 100.0 2e-48 MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVP AFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN >gi|296918652|gb|GG773048.1| GENE 115 120193 - 121668 2001 491 aa, chain - ## HITS:1 COG:ilvC KEGG:ns NR:ns ## COG: ilvC COG0059 # Protein_GI_number: 16131632 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Escherichia coli K12 # 1 491 1 491 491 966 99.0 0 MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDSG LDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVVNLTPDKQHSDVVRSVQP LMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPE NDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKL VEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDRLSNPAKLRAYALSEQLKEIMAPLF QKHMDDIISGEFSSGMMADWANDDKKLLTWREETGKTAFETAPQYEGKIGEQEYFDKGVL MIAMVKAGVELAFETMVDSGIIEESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYG NYLFSYACVPLLKPFMAELQPGDLGKAIPEGAVDNAQLRDVNEAIRSHAIEQVGKKLRGY MTDMKRIAVAG >gi|296918652|gb|GG773048.1| GENE 116 121818 - 122708 794 296 aa, chain + ## HITS:1 COG:ilvY KEGG:ns NR:ns ## COG: ilvY COG0583 # Protein_GI_number: 16131631 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 296 1 296 297 560 99.0 1e-159 MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEDDLGQPLFVRDNRTVTLTEA GEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAAYSHLPPILDRFRAEHPSV EIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSMLENLAVVLIAPALPCPVRNQ VSAEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPMIYATVGGHEAMVSMVALGCGVA LLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCAQKKRLHEPLIEAFWKILPNH >gi|296918652|gb|GG773048.1| GENE 117 122705 - 124249 1543 514 aa, chain - ## HITS:1 COG:ECs4706 KEGG:ns NR:ns ## COG: ECs4706 COG1171 # Protein_GI_number: 15833960 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 1009 100.0 0 MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHS FKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDA VRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHL DRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAE GVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYI AQHNIRGERLAHILSGANVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLG GRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVR YMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTHWNISLFHYRSHGTDYGRVLAAFE LGDHEPDFETRLNELGYDCHDETNNPAFRFFLAG >gi|296918652|gb|GG773048.1| GENE 118 124252 - 126102 2082 616 aa, chain - ## HITS:1 COG:ECs4705 KEGG:ns NR:ns ## COG: ECs4705 COG0129 # Protein_GI_number: 15833959 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli O157:H7 # 1 616 1 616 616 1206 98.0 0 MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLV AEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCIS NCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPKVSDSQ SDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIV ELTKRYYEQDDESALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSD IDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQT LEQYDIIVTQDDAVKNMFRAGPAGIRTTQAFSQDCRWDTLDDDRSNGCIRSLEHAYSKDG GLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRY EGPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGSIGL IEDGDLIAIDIPNRGIQLQVSDAELAARREAQEARGDKAWTPKNRERQVSFALRAYASLA TSADKGAVRDKSKLGG >gi|296918652|gb|GG773048.1| GENE 119 126167 - 127096 1098 309 aa, chain - ## HITS:1 COG:ECs4704 KEGG:ns NR:ns ## COG: ECs4704 COG0115 # Protein_GI_number: 15833958 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 642 99.0 0 MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQR LHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDV IIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGY QEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVHEQ VLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAFFGLFTGETEDK WGWLDQVNQ >gi|296918652|gb|GG773048.1| GENE 120 127116 - 127379 237 87 aa, chain - ## HITS:1 COG:ECs4703 KEGG:ns NR:ns ## COG: ECs4703 COG3978 # Protein_GI_number: 15833957 # Func_class: S Function unknown # Function: Acetolactate synthase (isozyme II), small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 143 100.0 8e-35 MMQHQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQNINIELTVASPRSVDLL FSQLNKLVDVAHVAICQSTTTSQQIRA >gi|296918652|gb|GG773048.1| GENE 121 127376 - 129022 1459 548 aa, chain - ## HITS:1 COG:ECs4702 KEGG:ns NR:ns ## COG: ECs4702 COG0028 # Protein_GI_number: 15833956 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 548 1 548 548 1092 97.0 0 MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAAMAAIGYARA TGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDILGLSLA CTKHSFLVQSLEELPRIMAEAFDVASSGRPGPVLVDIPKDIQLASGDLEPWFTTVENEVT FSHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVSALREFLAATKMPATCTLKGLGAVEAD YPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDPAEM NKLRQAHVALQGDLNALLPALQQPLNIDDWQQHCAQLRDEHAWRYDHPGDAIYAPLLLKQ LSDRKSADCIVTTDVGQHQMWAAQHIVHTRPENFITSSGLGTMGFGLPAAVGAQVARPND TVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQERYSETTLTD NPDFLMLASAFGIPGQHITHKDQVEAALDTMLNSDGPYLLHVSIDELENVWPLVPPGASN SEMLEKLS >gi|296918652|gb|GG773048.1| GENE 122 129613 - 131133 898 506 aa, chain + ## HITS:1 COG:ECs4700 KEGG:ns NR:ns ## COG: ECs4700 COG0606 # Protein_GI_number: 15833954 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Escherichia coli O157:H7 # 1 506 11 516 516 972 98.0 0 MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTLKEARDRVRSAIINSGYEY PAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVP GAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHLQAVCAFLEGKHALEHPKPTN AVSRALQHDLSDVVGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFL DELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCT PEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGENSTTVKQRVMAARERQFKR QNKLNAWLDNPEIRQFCKLESEDAQWLEETLIHLGLSIRAWQRLLKVARTIADIDQSDII TRQHLQEAVSYRAIDRLLIHLQKLLT >gi|296918652|gb|GG773048.1| GENE 123 131158 - 131496 432 112 aa, chain - ## HITS:1 COG:ECs4699 KEGG:ns NR:ns ## COG: ECs4699 COG3085 # Protein_GI_number: 15833953 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 208 100.0 2e-54 MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLF VAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD >gi|296918652|gb|GG773048.1| GENE 124 131615 - 132454 607 279 aa, chain + ## HITS:1 COG:yifD+A KEGG:ns NR:ns ## COG: yifD+A COG0583 # Protein_GI_number: 16132258 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 279 1 279 279 536 99.0 1e-152 MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAA GEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDVHTG LQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFCSQLLGYFTLALYTSAPSKLKGDL NYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLH TVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:57:36 2011 Seq name: gi|296918651|gb|GG773049.1| Escherichia coli MS 110-3 genomic scaffold Scfld832, whole genome shotgun sequence Length of sequence - 509 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 175 73 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 221 - 280 6.1 Predicted protein(s) >gi|296918651|gb|GG773049.1| GENE 1 1 - 175 73 58 aa, chain - ## HITS:1 COG:STM2861 KEGG:ns NR:ns ## COG: STM2861 COG0803 # Protein_GI_number: 16766167 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Salmonella typhimurium LT2 # 8 58 9 58 305 66 68.0 9e-12 MLSIKKVTMLLGCLVLTCSIAFQASAAEKFKVITTFTIIADMAKNVAGDAAEVSSITK Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:57:38 2011 Seq name: gi|296918650|gb|GG773050.1| Escherichia coli MS 110-3 genomic scaffold Scfld888, whole genome shotgun sequence Length of sequence - 8749 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 6, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 83 - 547 546 ## UTI89_C2275 hypothetical protein - Prom 731 - 790 1.9 2 2 Tu 1 . - CDS 889 - 1707 608 ## ECS88_4893 hypothetical protein 3 3 Op 1 2/0.000 - CDS 2051 - 4870 2255 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 5086 - 5145 3.1 - Term 5088 - 5124 3.4 4 3 Op 2 . - CDS 5242 - 5859 430 ## COG3596 Predicted GTPase - Prom 6028 - 6087 80.3 - Term 5937 - 6005 31.1 5 4 Op 1 . - CDS 6150 - 6602 -38 ## EcHS_A2137 hypothetical protein 6 4 Op 2 . - CDS 6717 - 7067 145 ## EcHS_A2137 hypothetical protein - Prom 7102 - 7161 8.4 7 5 Tu 1 . + CDS 8165 - 8362 85 ## c0304 hypothetical protein - Term 8177 - 8209 -0.1 8 6 Tu 1 . - CDS 8268 - 8747 258 ## EcE24377A_4888 hypothetical protein Predicted protein(s) >gi|296918650|gb|GG773050.1| GENE 1 83 - 547 546 154 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2275 NR:ns ## KEGG: UTI89_C2275 # Name: yafX2 # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 154 25 181 181 311 92.0 4e-84 MKTLSQNTTSSACAPETDLQQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRL CEDYCGGIWNLYTLNNGGAFMAPEPDDETWVLFNVMNGNRAEMSPEAAGIAACLMAYSHH ACRTENYAMTVHYYRLRDYALQHPECSAIMRIID >gi|296918650|gb|GG773050.1| GENE 2 889 - 1707 608 272 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4893 NR:ns ## KEGG: ECS88_4893 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 272 1 272 272 518 97.0 1e-146 MRLASRFGYTNQIRRDRPLTHEELMHYVPSIFGEDRHTSRSKRYAYIPTITVLESLQREG FQPFFACQTRVRDPGRRGYTKHMLRLRRAGEINGEHVPEIILLNSHDGTSSYQMLPGYFR FVCQNGCVCGQSPGEVRVPHRGNVVDRVIEGAYEVVGVFDRIEEKRDAMQSLVLPPPTRQ ALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK RIHTRAIHNIDTDIKLNRALWVMAETLLESLR >gi|296918650|gb|GG773050.1| GENE 3 2051 - 4870 2255 939 aa, chain - ## HITS:1 COG:Z1211 KEGG:ns NR:ns ## COG: Z1211 COG3468 # Protein_GI_number: 15800732 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 EDL933 # 1 937 57 994 1005 1372 89.0 0 MKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGVAVALSLAAVTSLPALAADTVVQAG ETVNGGTLENHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL QRVNAGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG AVATDTVVNTGAEGGPDAENGDTGQFVRGNAARTTINKNGRQIVAVEGTANTTVVYAGGD QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAG GTATNVTLKQGGALVTSTAATVLGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAQKT RVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGKFSIDGISGQASGLLLEN GGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGE IYFDNQTTPDAVLSRAVAKGNAPVTFHKLTTSNLTGQGGTINMRVRLDGSNASDQLVING GQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEEGAFALSRPLQAGAFNYTLN RDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGG HLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDD GSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSL ETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMS FGEGTSSRDTLRDSAKHRVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRN GTSLDLQAGLEARVRENITLGVQGGYAHSVSGSSAEGAS >gi|296918650|gb|GG773050.1| GENE 4 5242 - 5859 430 205 aa, chain - ## HITS:1 COG:ECs1395 KEGG:ns NR:ns ## COG: ECs1395 COG3596 # Protein_GI_number: 15830649 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 205 86 290 290 387 95.0 1e-107 MIITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQ QVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHPVVAVSACTGWE LDTLVSALMTALPDHAASPLMTRLQDELRTESVRSQAREQFTGAVDRIFDTAESVCIASV ARAVLRAVRDSVVSVARAVWNWIFF >gi|296918650|gb|GG773050.1| GENE 5 6150 - 6602 -38 150 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A2137 NR:ns ## KEGG: EcHS_A2137 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 150 156 305 305 300 99.0 2e-80 MRDEWIIQTKDRWMRAFKSKSPFSYLLPENEHECIWTWNYLKGKNIALEKLASFPGSADI YHAIHLSFDIWVTCPLTSPDDIKNFRNSFNKAKAQRKYKKMQEDKVNVQFFLDAETRAQL KELSRVRRLSTGEMLHDLIVEEYKRYRHSR >gi|296918650|gb|GG773050.1| GENE 6 6717 - 7067 145 116 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A2137 NR:ns ## KEGG: EcHS_A2137 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 116 1 116 305 226 100.0 3e-58 MVQKILSDKVMNERTNAYYSYYLGERNISVLPLNVYDPPERFIAYIKKNRENLNITLSDF ELEQIISGMRLKALAFLVPLEKISWIAGSERACLFSWYLLMQFIQNNRAKISADLL >gi|296918650|gb|GG773050.1| GENE 7 8165 - 8362 85 65 aa, chain + ## HITS:1 COG:no KEGG:c0304 NR:ns ## KEGG: c0304 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 65 1 65 66 109 90.0 4e-23 MAQYDDDEHALQVSMRGREHHHFRILSHLPEATGISCGYRQPLCGMPGARTDPSDPSVLR SASDG >gi|296918650|gb|GG773050.1| GENE 8 8268 - 8747 258 159 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_4888 NR:ns ## KEGG: EcE24377A_4888 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 159 44 202 202 315 99.0 3e-85 NLTPGWVSFNGEKPEIAIVPQSLHRLIYGPDKRATPPLDDDLIVNLCTSEHLLVHHPMLE GILLSECERLRQRSLANKLISLFRQFGGTELRLKLVWLCWLDLMTGNSLEDWKENLKRKS EKELEEWIINRQRQSAALTDLMDQYVLLAYRTTVDDNRN Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:57:56 2011 Seq name: gi|296918649|gb|GG773051.1| Escherichia coli MS 110-3 genomic scaffold Scfld955, whole genome shotgun sequence Length of sequence - 882 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 324 - 383 4.3 1 1 Tu 1 . + CDS 546 - 782 58 ## gi|300916168|ref|ZP_07132932.1| hindIII restriction endonuclease Predicted protein(s) >gi|296918649|gb|GG773051.1| GENE 1 546 - 782 58 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300916168|ref|ZP_07132932.1| ## NR: gi|300916168|ref|ZP_07132932.1| hindIII restriction endonuclease [Escherichia coli MS 115-1] hindIII restriction endonuclease [Escherichia coli MS 115-1] # 1 78 231 308 308 135 100.0 9e-31 MLSYDSRIAELWSDEKSATTEGIAVSKKMAIEFLSSERTRMLMMTKDEAVSALIKMHKID SRIDQINKVTDNNILSLK Prediction of potential genes in microbial genomes Time: Thu Jul 7 13:58:02 2011 Seq name: gi|296918648|gb|GG773052.1| Escherichia coli MS 110-3 genomic scaffold Scfld999, whole genome shotgun sequence Length of sequence - 591 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 12 - 591 294 ## COG5655 Plasmid rolling circle replication initiator protein and truncated derivatives Predicted protein(s) >gi|296918648|gb|GG773052.1| GENE 1 12 - 591 294 193 aa, chain + ## HITS:1 COG:pli0015 KEGG:ns NR:ns ## COG: pli0015 COG5655 # Protein_GI_number: 18450301 # Func_class: L Replication, recombination and repair # Function: Plasmid rolling circle replication initiator protein and truncated derivatives # Organism: Listeria innocua # 12 191 103 286 327 101 35.0 8e-22 MWQARFYQSLPKIVADYPDSRWMFLTLTVRNCDIADLGDTLTAMNAAFQRMKDRKEFKPV QGWIRTTEVTRGRDGSAHPHFHTLMMVPPGMLNGHDYVKHDRWVELWRECLRVDYSPNVD VRSVKPRKPKDGESLACATAELVRGAVSETLKYSTKPSDMVADSEWFLELTRQTHKRRFV ATGGALKDVLKLE Prediction of potential genes in microbial genomes Time: Thu Jul 7 14:00:03 2011 Seq name: gi|296918647|gb|GG773053.1| Escherichia coli MS 110-3 genomic scaffold Scfld1064, whole genome shotgun sequence Length of sequence - 41492 bp Number of predicted genes - 61, with homology - 60 Number of transcription units - 12, operones - 9 average op.length - 6.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 3197 - 3256 8.4 2 2 Op 1 9/0.000 + CDS 3365 - 3559 182 ## COG2906 Bacterioferritin-associated ferredoxin 3 2 Op 2 . + CDS 3631 - 4107 577 ## COG2193 Bacterioferritin (cytochrome b1) 4 3 Op 1 . - CDS 4136 - 4813 437 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 5 3 Op 2 . - CDS 4813 - 5274 264 ## APECO1_3118 putative general secretion pathway protein M 6 3 Op 3 4/0.667 - CDS 5271 - 6434 403 ## COG3297 Type II secretory pathway, component PulL 7 3 Op 4 7/0.000 - CDS 6449 - 7432 442 ## COG3156 Type II secretory pathway, component PulK 8 3 Op 5 12/0.000 - CDS 7425 - 8012 410 ## COG4795 Type II secretory pathway, component PulJ 9 3 Op 6 12/0.000 - CDS 8005 - 8400 267 ## COG2165 Type II secretory pathway, pseudopilin PulG 10 3 Op 7 12/0.000 - CDS 8397 - 8906 391 ## COG2165 Type II secretory pathway, pseudopilin PulG 11 3 Op 8 10/0.000 - CDS 8914 - 9351 531 ## COG2165 Type II secretory pathway, pseudopilin PulG 12 3 Op 9 24/0.000 - CDS 9361 - 10557 838 ## COG1459 Type II secretory pathway, component PulF 13 3 Op 10 6/0.000 - CDS 10554 - 12035 1073 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 14 3 Op 11 . - CDS 12045 - 13997 1395 ## COG1450 Type II secretory pathway, component PulD 15 3 Op 12 . - CDS 13981 - 14694 88 ## COG3031 Type II secretory pathway, component PulC - Prom 14886 - 14945 14.3 + Prom 14891 - 14950 11.4 16 4 Op 1 . + CDS 14976 - 16445 556 ## ECS88_3711 general secretory pathway component, cryptic 17 4 Op 2 . + CDS 16447 - 16866 346 ## ECB_03173 chromosome replication protein PioO 18 5 Tu 1 . - CDS 16835 - 17041 109 ## - Prom 17074 - 17133 2.2 + Prom 16874 - 16933 4.3 19 6 Op 1 40/0.000 + CDS 17104 - 17415 513 ## PROTEIN SUPPORTED gi|15803848|ref|NP_289882.1| 30S ribosomal protein S10 20 6 Op 2 58/0.000 + CDS 17448 - 18077 1056 ## PROTEIN SUPPORTED gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 21 6 Op 3 61/0.000 + CDS 18088 - 18693 992 ## PROTEIN SUPPORTED gi|15803846|ref|NP_289880.1| 50S ribosomal protein L4 22 6 Op 4 61/0.000 + CDS 18690 - 18992 490 ## PROTEIN SUPPORTED gi|15803845|ref|NP_289879.1| 50S ribosomal protein L23 23 6 Op 5 60/0.000 + CDS 19010 - 19831 1438 ## PROTEIN SUPPORTED gi|15803844|ref|NP_289878.1| 50S ribosomal protein L2 24 6 Op 6 59/0.000 + CDS 19848 - 20126 484 ## PROTEIN SUPPORTED gi|15803843|ref|NP_289877.1| 30S ribosomal protein S19 25 6 Op 7 61/0.000 + CDS 20141 - 20473 537 ## PROTEIN SUPPORTED gi|15803842|ref|NP_289876.1| 50S ribosomal protein L22 26 6 Op 8 50/0.000 + CDS 20491 - 21192 1183 ## PROTEIN SUPPORTED gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 27 6 Op 9 50/0.000 + CDS 21205 - 21615 694 ## PROTEIN SUPPORTED gi|15803840|ref|NP_289874.1| 50S ribosomal protein L16 28 6 Op 10 50/0.000 + CDS 21615 - 21806 301 ## PROTEIN SUPPORTED gi|15803839|ref|NP_289873.1| 50S ribosomal protein L29 29 6 Op 11 50/0.000 + CDS 21806 - 22060 431 ## PROTEIN SUPPORTED gi|15803838|ref|NP_289872.1| 30S ribosomal protein S17 + Term 22082 - 22125 10.3 + Prom 22094 - 22153 7.1 30 7 Op 1 57/0.000 + CDS 22225 - 22596 617 ## PROTEIN SUPPORTED gi|15803837|ref|NP_289871.1| 50S ribosomal protein L14 31 7 Op 2 48/0.000 + CDS 22607 - 22921 517 ## PROTEIN SUPPORTED gi|26249897|ref|NP_755937.1| 50S ribosomal protein L24 32 7 Op 3 50/0.000 + CDS 22936 - 23475 911 ## PROTEIN SUPPORTED gi|15803835|ref|NP_289869.1| 50S ribosomal protein L5 33 7 Op 4 50/0.000 + CDS 23490 - 23795 513 ## PROTEIN SUPPORTED gi|15803834|ref|NP_289868.1| 30S ribosomal protein S14 34 7 Op 5 55/0.000 + CDS 23829 - 24221 641 ## PROTEIN SUPPORTED gi|15803833|ref|NP_289867.1| 30S ribosomal protein S8 35 7 Op 6 46/0.000 + CDS 24234 - 24767 902 ## PROTEIN SUPPORTED gi|15803832|ref|NP_289866.1| 50S ribosomal protein L6 36 7 Op 7 56/0.000 + CDS 24777 - 25130 572 ## PROTEIN SUPPORTED gi|15803831|ref|NP_289865.1| 50S ribosomal protein L18 37 7 Op 8 50/0.000 + CDS 25145 - 25648 834 ## PROTEIN SUPPORTED gi|15803830|ref|NP_289864.1| 30S ribosomal protein S5 38 7 Op 9 48/0.000 + CDS 25652 - 25831 291 ## PROTEIN SUPPORTED gi|15803829|ref|NP_289863.1| 50S ribosomal protein L30 39 7 Op 10 53/0.000 + CDS 25835 - 26269 715 ## PROTEIN SUPPORTED gi|15803828|ref|NP_289862.1| 50S ribosomal protein L15 40 7 Op 11 . + CDS 26277 - 27608 1258 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 41 7 Op 12 . + CDS 27640 - 27756 198 ## PROTEIN SUPPORTED gi|15803826|ref|NP_289860.1| 50S ribosomal protein L36 + Term 27786 - 27827 8.2 + Prom 27798 - 27857 3.9 42 8 Op 1 48/0.000 + CDS 27903 - 28259 586 ## PROTEIN SUPPORTED gi|15803825|ref|NP_289859.1| 30S ribosomal protein S13 43 8 Op 2 36/0.000 + CDS 28276 - 28665 669 ## PROTEIN SUPPORTED gi|15803824|ref|NP_289858.1| 30S ribosomal protein S11 44 8 Op 3 26/0.000 + CDS 28699 - 29319 1038 ## PROTEIN SUPPORTED gi|15803823|ref|NP_289857.1| 30S ribosomal protein S4 45 8 Op 4 50/0.000 + CDS 29345 - 30334 990 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 46 8 Op 5 . + CDS 30375 - 30758 636 ## PROTEIN SUPPORTED gi|15803821|ref|NP_289855.1| 50S ribosomal protein L17 + Term 30781 - 30809 2.1 + Prom 30769 - 30828 16.0 47 9 Op 1 . + CDS 30923 - 31291 282 ## ECS88_3681 hypothetical protein 48 9 Op 2 2/1.000 + CDS 31302 - 31727 414 ## COG0789 Predicted transcriptional regulators 49 9 Op 3 . + CDS 31783 - 32001 76 ## COG3036 Uncharacterized protein conserved in bacteria 50 10 Op 1 7/0.000 - CDS 31998 - 32411 405 ## COG1970 Large-conductance mechanosensitive channel - Prom 32445 - 32504 5.6 - Term 32500 - 32539 8.6 51 10 Op 2 8/0.000 - CDS 32541 - 33917 1225 ## COG0569 K+ transport systems, NAD-binding component 52 10 Op 3 20/0.000 - CDS 33939 - 35201 1096 ## COG0144 tRNA and rRNA cytosine-C5-methylases - Term 35235 - 35263 3.0 53 10 Op 4 26/0.000 - CDS 35280 - 36227 858 ## COG0223 Methionyl-tRNA formyltransferase 54 10 Op 5 . - CDS 36242 - 36751 526 ## COG0242 N-formylmethionyl-tRNA deformylase - Prom 36790 - 36849 3.5 + Prom 36685 - 36744 2.4 55 11 Op 1 8/0.000 + CDS 36881 - 38005 324 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 56 11 Op 2 7/0.000 + CDS 37977 - 38450 591 ## COG2922 Uncharacterized protein conserved in bacteria 57 11 Op 3 6/0.000 + CDS 38479 - 39021 201 ## COG0551 Zn-finger domain associated with topoisomerase type I 58 11 Op 4 8/0.000 + CDS 39026 - 39598 320 ## COG0009 Putative translation factor (SUA5) 59 11 Op 5 . + CDS 39603 - 40421 412 ## COG0169 Shikimate 5-dehydrogenase 60 11 Op 6 . + CDS 40502 - 40675 106 ## c4041 hypothetical protein 61 12 Tu 1 . - CDS 40651 - 41277 440 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily - Prom 41328 - 41387 2.7 Predicted protein(s) >gi|296918647|gb|GG773053.1| GENE 1 468 - 3170 1896 900 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3726 NR:ns ## KEGG: ECS88_3726 # Name: chiA # Def: periplasmic endochitinase (EC:3.2.1.14 3.2.1.17) # Organism: E.coli_S88 # Pathway: Amino sugar and nucleotide sugar metabolism [PATH:ecz00520] # 1 900 1 900 900 1628 100.0 0 MKLNIFTKSMIGMGLVCSALPALAMEAWNNQQGGNKYQVIFDGKIYENAWWVSSTNCPGK AKANDATNPWRLKRTATAAEISQFGNTLSCEKSGSSSSSTSNTPASNTPANGASATPAQG TVPSNSSVVAWNKQQGGQTWYVVFNGAVYKNAWWVASSNCPGDAKGNDASNPWRYVRAAT ATEISETSNPQSCTSAPQPAPDVKPAPDVKPAPDVQPAPADKSNDNYAVVAWKGQEGSST WYVIYNGGIYKNAWWVGAANCPGDAKENDASNPWRYVRAATATEITQYGNPASCSVKPDN NGGAVTPVDPTPETPETPVTPTPDNNEPSTPADSSNDYSLQAWSGQEGSEIYHVIFNGNV YQNAWWVGSEDCPRGTSVENSNNPWRLVRTATAAEMSQYGNPTTCEIDNGGVIIADGFQA SKAYSANSIVDYNDAHYKTSVDQDAWGFVPGGDNPWKKYEPAKAWSASTVYVKGDRVVVD GQAYEALFWTQSDNPALIANQNATGSNSRPWKPLGKTQSYSNEELNNAPQFNPETLYASD TLIRFNGENYISQSKVQKVSPSDSNPWRVFVDWTGTKERVGTPKKAWPKHVYAPYVDFTL NTIPDLAALAKSHNVNHFTLAFVVSKDANTCLPTWGTAYGMQNYAQYSKIKALREAGGDV MLSIGGANNAPLAASCKNVDDLMQHYYDIVDNLNLRVLDFDIEGTWVADQASIERRNLAV KKVQDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNAIC QSANTEGQNIHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYL SDARLVMQDAQKRNLGMVGIWSIARDLPGGTNLSPEFHGLTKEQAPKYAFSEIFAPFTKQ >gi|296918647|gb|GG773053.1| GENE 2 3365 - 3559 182 64 aa, chain + ## HITS:1 COG:bfd KEGG:ns NR:ns ## COG: bfd COG2906 # Protein_GI_number: 16131216 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin-associated ferredoxin # Organism: Escherichia coli K12 # 1 64 1 64 64 119 100.0 1e-27 MYVCLCNGISDKKIRQAVRQFSPHSFQQLKKFIPVGNQCGKCVRAAREVMEDELMQLPEF KESA >gi|296918647|gb|GG773053.1| GENE 3 3631 - 4107 577 158 aa, chain + ## HITS:1 COG:bfr KEGG:ns NR:ns ## COG: bfr COG2193 # Protein_GI_number: 16131215 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Escherichia coli K12 # 1 158 1 158 158 278 100.0 3e-75 MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIE RILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMM IEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG >gi|296918647|gb|GG773053.1| GENE 4 4136 - 4813 437 225 aa, chain - ## HITS:1 COG:hofD KEGG:ns NR:ns ## COG: hofD COG1989 # Protein_GI_number: 16131214 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Escherichia coli K12 # 1 225 1 225 225 349 97.0 2e-96 MTMLLPLFILVGFIAGYFVNVMAYHLSPLEDKTALTFRQVLVHFWQKKYAWHDTVPLILC VAAAIACALAPFTPIVTGALFLYFCFALTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQSG LIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLI ASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY >gi|296918647|gb|GG773053.1| GENE 5 4813 - 5274 264 153 aa, chain - ## HITS:1 COG:no KEGG:APECO1_3118 NR:ns ## KEGG: APECO1_3118 # Name: pshM # Def: putative general secretion pathway protein M # Organism: E.coli_APEC # Pathway: Bacterial secretion system [PATH:ecv03070] # 1 153 9 161 161 284 100.0 7e-76 MIKSWWAEKSTSEKQIVAALAVLSLGVFCWLAVIKPIDTYIEEHQSHAQKIKKDIKWMQD QASTHGLLGHPALTQPIKNILLEEAKRENLTITLENGPDNTLTINPVTAPLENVSRWLTT AQITYGIVIEDLQFTLAGNEEITLKHLSFREQQ >gi|296918647|gb|GG773053.1| GENE 6 5271 - 6434 403 387 aa, chain - ## HITS:1 COG:gspL KEGG:ns NR:ns ## COG: gspL COG3297 # Protein_GI_number: 16131212 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulL # Organism: Escherichia coli K12 # 1 387 2 388 388 693 96.0 0 MPESLMVIRSFSTLRKHWEWMTFSADSVSSVHTLTDDLPLESLADQPGAGNVHLLIPPEG LLYRSLTLPNAKYKLTAQTLQWLAEETLPDASQNWHWMVVDKQNESVEVIGIQSEKLSRY LERLHTAGLNVTRVLPDGCYLPWEVDSWTLVNQQTSWLIRSAAHAFNELDEHWLQHLANQ FPPENMRCYGVAPHGVAAANPLIQHPEIPSLSLYSADIAFQRYDMLHGVFRKQKTVSKSG KWLARLAVSCLVLAILSFVGSRGIAFWQTLKIEDQLQQQQQETWQRYFPQIKHTHNFRFY FKQQLAQQYPEAVPLLYHLQTLLLEHPELQLMEANYSQRQKSLTLKMSAKSEANIDRFCE LTQSWLPMEKTEKDPVSGVWTVRNSGK >gi|296918647|gb|GG773053.1| GENE 7 6449 - 7432 442 327 aa, chain - ## HITS:1 COG:gspK KEGG:ns NR:ns ## COG: gspK COG3156 # Protein_GI_number: 16131211 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulK # Organism: Escherichia coli K12 # 1 327 1 327 327 576 97.0 1e-164 MNNEQRGVALLIVLMLLALMAALAADMTISFHGQLHRTRQVNHHLQRQYDIELAEKLALA SLTQDVKDNDRQTTLQQYWAQPQQLQLENGNTVKWQLRDAQHCFNLNALAKISDAPLASP DFPAQVFSALLINAGIDRGNTDEIVQSIADYIDADDSPRFHGAEDNFYQSQTPPRHSANQ MLFLTGELRQIKGITENIYQRLIPYVCVLPTSELSINLNMLTENDIPLFRALFLNNITDA DARVLLQKRPREGWLTTDAFLYWAQQDFSGVKPLVAQVKGHLFPYSRYFTLSTESISDEQ SQGWQSHIFFNRKQQSAQIYRRTLQLY >gi|296918647|gb|GG773053.1| GENE 8 7425 - 8012 410 195 aa, chain - ## HITS:1 COG:gspJ KEGG:ns NR:ns ## COG: gspJ COG4795 # Protein_GI_number: 16131210 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Escherichia coli K12 # 1 195 1 195 195 322 98.0 2e-88 MINRQQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDN DLLQLVARRNRSTDKIMVLGEEAIFTTQSRDPLAPLSEAQTLLTVHWYLRNHTLYRAVRT SVDGRKDQPAQAMLEHVESFLLESNSGESQELPLSVTLHLKTQQYGALQRRFALPEQLAR EESPAQTQAGNNNHE >gi|296918647|gb|GG773053.1| GENE 9 8005 - 8400 267 131 aa, chain - ## HITS:1 COG:gspI KEGG:ns NR:ns ## COG: gspI COG2165 # Protein_GI_number: 16131209 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 1 131 14 138 138 191 91.0 3e-49 MNKQSGMTLLEVLLAMSIFTAVALTLMSSMQGQRTAIERMRDETLALWIADNQLQSQDSF DEENTSSSGKELINGEELINGEEWNWRSDIHSSKDGTLLEHTITVTLPSGQTTSLTRYQS INNKSGQAQDD >gi|296918647|gb|GG773053.1| GENE 10 8397 - 8906 391 169 aa, chain - ## HITS:1 COG:hofH KEGG:ns NR:ns ## COG: hofH COG2165 # Protein_GI_number: 16131208 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 1 169 1 169 169 302 95.0 2e-82 MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDAASTRARETAARFTAALELAIDRATL SGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESKNDWGEELSIQLQPFKPDDSN QPQVVILADGQITPFSLLMANAGTSKPLLTLVSSGSWPLDQTLARDTRP >gi|296918647|gb|GG773053.1| GENE 11 8914 - 9351 531 145 aa, chain - ## HITS:1 COG:hofG KEGG:ns NR:ns ## COG: hofG COG2165 # Protein_GI_number: 16131207 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 1 145 1 145 145 256 99.0 8e-69 MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYK LDNHRYPTTNQGLESLVEAPTLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDL LSAGPDGEMGTEDDITNWGLSKKKK >gi|296918647|gb|GG773053.1| GENE 12 9361 - 10557 838 398 aa, chain - ## HITS:1 COG:hofF KEGG:ns NR:ns ## COG: hofF COG1459 # Protein_GI_number: 16131206 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Escherichia coli K12 # 1 398 1 398 398 707 99.0 0 MNYRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRPQKSSGVKTRRPRISHSE LTLFTRQLATLSAAALPLEESLAVIGQQSSNNRLADVLNQVRSAILEGHPLSDALQHFPT LFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKLIQSLIYPCMLTTVAIVVVII LLTAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTGPTLLATVFIVAVGFWLWLKRGN NRHRFHAMLLRVALIGPLICAINSARYLRTLSILQSSGVPLLDGMNLSTESLNNLEIRQR LANAAENVRQGNSIHLSLEQTAIFPPMMLYMVASGEKSGQLGTLMVRAADNQETLQQNRI ALTLSIFEPALIITMALIVLFIVVSVLQPLLQLNSMIN >gi|296918647|gb|GG773053.1| GENE 13 10554 - 12035 1073 493 aa, chain - ## HITS:1 COG:gspE KEGG:ns NR:ns ## COG: gspE COG2804 # Protein_GI_number: 16131205 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Escherichia coli K12 # 1 493 1 493 493 926 99.0 0 MRIHSPYPASWALAQRIGYLYSEGEIIYLADTPFERLLDIQRQVGQCQTMTSLSQADFEA RLEAVFHQNTGESQQIAQDIDQSVDLLSLSEEMPANEDLLNEDSAAPVIRLINAILSEAI KETASDIHIETYEKTMSIRFRIDGVLRTILQPNKKLAALLISRIKVMARLDIAEKRIPQD GRISLRIGRRNIDVRVSTLPSIYGERAVLRLLDKNSLQLSLNNLGMTAADKQDLENLIQL PHGIILVTGPTGSGKSTTLYAILSALNTPGRNILTVEDPVEYELEGIGQTQVNTRVDMSF ARGLRAILRQDPDVVMVGEIRDTETAQIAVQASLTGHLVLSTLHTNSASGAVTRLRDMGV ESFLLSSSLAGIIAQRLVRRLCPQCRQFTPVSPQQAQMFKHHQLAVTTIGTPVGCPHCHQ SGYQGRMAIHEMMVVTPELRAAIHENVDEQALERLVRQQHNALIKNGLQKVIRGDTSWDE VMRVASATLENEA >gi|296918647|gb|GG773053.1| GENE 14 12045 - 13997 1395 650 aa, chain - ## HITS:1 COG:gspD KEGG:ns NR:ns ## COG: gspD COG1450 # Protein_GI_number: 16131204 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Escherichia coli K12 # 1 650 5 654 654 1216 99.0 0 MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQG TISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPG VGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEV IKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLI ISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNSR KPSSTSAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDG NGLNLGVQWANKNVGAQQFTNTGLPVFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAA GFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFN TVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTG ETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVY RSLSKEKYTRYRQEQQLRIDGKSKALIGSEDLPVLDENTFNSHAPAPSSR >gi|296918647|gb|GG773053.1| GENE 15 13981 - 14694 88 237 aa, chain - ## HITS:1 COG:gspC KEGG:ns NR:ns ## COG: gspC COG3031 # Protein_GI_number: 16131203 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulC # Organism: Escherichia coli K12 # 1 237 35 271 271 427 96.0 1e-120 MNYFHTTIVKNEQIINQPTNAFQSEFSLAALWRNENHAGVKDANPVAVNQETPKLSIALN GIVLTSNDETSFVLINEGNEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLH PGLPDIIKQPDSENQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALR INNLSLTHPDEVSQALSLLLTQQSAQFTIRRNGVPRLINVSVAELTGMNGQRNEGTQ >gi|296918647|gb|GG773053.1| GENE 16 14976 - 16445 556 489 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3711 NR:ns ## KEGG: ECS88_3711 # Name: gspA # Def: general secretory pathway component, cryptic # Organism: E.coli_S88 # Pathway: not_defined # 1 489 1 489 489 943 100.0 0 MSTRREVILSWLREKRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKA AWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQR AISLIPDGQFLLIGRPDRKVERDFKKQGIELVSTGRLTEHELKASILEGQNIDQPDLLLT ARVLKRIALLCRGDRRKLALAGETISLLQQAEQTRVFTAKQWRMIYRVLGDKRPRKMQLA VVMSGTILALTCGWLLLSSFTAPLPVPAWLIPVTPVVKQDMTKDIAHVVMRDSEALSVLY GVWGYEVPADSAWCDQAVRAGLVCKSGNASLQTLVDQNLPWIASLKVGDKKLPVVVVRVG DATVDVLVGQQTWTLTHKWFELVWTGDYLLLWKMSPEGESTIMRDSSEEEILWLETMLNR ALHISTESSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHLWQVAGESAYLYRDEANI SPETTVKGK >gi|296918647|gb|GG773053.1| GENE 17 16447 - 16866 346 139 aa, chain + ## HITS:1 COG:no KEGG:ECB_03173 NR:ns ## KEGG: ECB_03173 # Name: pioO # Def: chromosome replication protein PioO # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 139 1 139 139 262 97.0 4e-69 MFEFYIAAREQKETGHPGIFSRQKHSTIIYVICLLLICLWFAGMVLVGGYARQLWALWIV KAEVTVDAETPAFKQSTQHYFFKKQPLPVVESVEEEDEPGVAVENAPSSSEDEENTVEES DEKAGLRERVKNALNELER >gi|296918647|gb|GG773053.1| GENE 18 16835 - 17041 109 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGECNRSYVAPRLGALLGSQIRLTEVQIEPAVNYDKPAHYTYLTTERKRIASKVNSLWVI SQVRSAHF >gi|296918647|gb|GG773053.1| GENE 19 17104 - 17415 513 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803848|ref|NP_289882.1| 30S ribosomal protein S10 [Escherichia coli O157:H7 EDL933] # 1 103 1 103 103 202 100 3e-51 MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKD ARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG >gi|296918647|gb|GG773053.1| GENE 20 17448 - 18077 1056 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 EDL933] # 1 209 1 209 209 411 100 1e-114 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV TKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAG TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV DAERNLLLVKGAVPGATGSDLIVKPAVKA >gi|296918647|gb|GG773053.1| GENE 21 18088 - 18693 992 201 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803846|ref|NP_289880.1| 50S ribosomal protein L4 [Escherichia coli O157:H7 EDL933] # 1 201 1 201 201 386 100 1e-106 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL IAFDKVVMTADAVKQVEEMLA >gi|296918647|gb|GG773053.1| GENE 22 18690 - 18992 490 100 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803845|ref|NP_289879.1| 50S ribosomal protein L23 [Escherichia coli O157:H7 EDL933] # 1 100 1 100 100 193 100 2e-48 MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNT LVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE >gi|296918647|gb|GG773053.1| GENE 23 19010 - 19831 1438 273 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803844|ref|NP_289878.1| 50S ribosomal protein L2 [Escherichia coli O157:H7 EDL933] # 1 273 1 273 273 558 100 1e-158 MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQ AYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGV DAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGE MRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF GKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK >gi|296918647|gb|GG773053.1| GENE 24 19848 - 20126 484 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803843|ref|NP_289877.1| 30S ribosomal protein S19 [Escherichia coli O157:H7 EDL933] # 1 92 1 92 92 191 100 8e-48 MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPV FVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK >gi|296918647|gb|GG773053.1| GENE 25 20141 - 20473 537 110 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803842|ref|NP_289876.1| 50S ribosomal protein L22 [Escherichia coli O157:H7 EDL933] # 1 110 1 110 110 211 100 6e-54 METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEH NDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR >gi|296918647|gb|GG773053.1| GENE 26 20491 - 21192 1183 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. Sakai] # 1 233 1 233 233 460 100 1e-129 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK >gi|296918647|gb|GG773053.1| GENE 27 21205 - 21615 694 136 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803840|ref|NP_289874.1| 50S ribosomal protein L16 [Escherichia coli O157:H7 EDL933] # 1 136 1 136 136 271 100 4e-72 MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQ GKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLA AAKLPIKTTFVTKTVM >gi|296918647|gb|GG773053.1| GENE 28 21615 - 21806 301 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803839|ref|NP_289873.1| 50S ribosomal protein L29 [Escherichia coli O157:H7 EDL933] # 1 63 1 63 63 120 100 1e-26 MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEK AGA >gi|296918647|gb|GG773053.1| GENE 29 21806 - 22060 431 84 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803838|ref|NP_289872.1| 30S ribosomal protein S17 [Escherichia coli O157:H7 EDL933] # 1 84 1 84 84 170 100 1e-41 MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVE IRECRPLSKTKSWTLVRVVEKAVL >gi|296918647|gb|GG773053.1| GENE 30 22225 - 22596 617 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803837|ref|NP_289871.1| 50S ribosomal protein L14 [Escherichia coli O157:H7 EDL933] # 1 123 1 123 123 242 100 3e-63 MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKA VVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAP EVL >gi|296918647|gb|GG773053.1| GENE 31 22607 - 22921 517 104 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|26249897|ref|NP_755937.1| 50S ribosomal protein L24 [Escherichia coli CFT073] # 1 104 1 104 104 203 100 1e-51 MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPALNQPGGIVE KEAAIQVSNVAIFNATTGKADRVGFRFEDGKKVRFFKSNSETIK >gi|296918647|gb|GG773053.1| GENE 32 22936 - 23475 911 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803835|ref|NP_289869.1| 50S ribosomal protein L5 [Escherichia coli O157:H7 EDL933] # 1 179 1 179 179 355 100 2e-97 MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK >gi|296918647|gb|GG773053.1| GENE 33 23490 - 23795 513 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803834|ref|NP_289868.1| 30S ribosomal protein S14 [Escherichia coli O157:H7 EDL933] # 1 101 1 101 101 202 100 3e-51 MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQ RNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW >gi|296918647|gb|GG773053.1| GENE 34 23829 - 24221 641 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803833|ref|NP_289867.1| 30S ribosomal protein S8 [Escherichia coli O157:H7 EDL933] # 1 130 1 130 130 251 100 5e-66 MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELE LTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAG LGGEIICYVA >gi|296918647|gb|GG773053.1| GENE 35 24234 - 24767 902 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803832|ref|NP_289866.1| 50S ribosomal protein L6 [Escherichia coli O157:H7 EDL933] # 1 177 1 177 177 352 100 3e-96 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYAD GWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAG ITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVRTKEAKKK >gi|296918647|gb|GG773053.1| GENE 36 24777 - 25130 572 117 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803831|ref|NP_289865.1| 50S ribosomal protein L18 [Escherichia coli O157:H7 EDL933] # 1 117 1 117 117 224 100 5e-58 MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAE QLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF >gi|296918647|gb|GG773053.1| GENE 37 25145 - 25648 834 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803830|ref|NP_289864.1| 30S ribosomal protein S5 [Escherichia coli O157:H7 EDL933] # 1 167 1 167 167 325 100 2e-88 MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAI QKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGV HNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK >gi|296918647|gb|GG773053.1| GENE 38 25652 - 25831 291 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803829|ref|NP_289863.1| 50S ribosomal protein L30 [Escherichia coli O157:H7 EDL933] # 1 59 1 59 59 116 100 2e-25 MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKVEE >gi|296918647|gb|GG773053.1| GENE 39 25835 - 26269 715 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803828|ref|NP_289862.1| 50S ribosomal protein L15 [Escherichia coli O157:H7 EDL933] # 1 144 1 144 144 280 100 1e-74 MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR LPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPV TVRGLRVTKGARAAIEAAGGKIEE >gi|296918647|gb|GG773053.1| GENE 40 26277 - 27608 1258 443 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 12 440 16 444 447 489 56 1e-137 MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTI IEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYT RYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITE RGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERG QRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGW NWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGE QTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQV QTLMMSSQYESALKKANLKGYGR >gi|296918647|gb|GG773053.1| GENE 41 27640 - 27756 198 38 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803826|ref|NP_289860.1| 50S ribosomal protein L36 [Escherichia coli O157:H7 EDL933] # 1 38 1 38 38 80 100 1e-14 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG >gi|296918647|gb|GG773053.1| GENE 42 27903 - 28259 586 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803825|ref|NP_289859.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 EDL933] # 1 118 1 118 118 230 99 1e-59 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK >gi|296918647|gb|GG773053.1| GENE 43 28276 - 28665 669 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803824|ref|NP_289858.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 EDL933] # 1 129 1 129 129 262 100 3e-69 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG CRPPKKRRV >gi|296918647|gb|GG773053.1| GENE 44 28699 - 29319 1038 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803823|ref|NP_289857.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 EDL933] # 1 206 1 206 206 404 100 1e-112 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQK VRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSH KAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEG TFKRKPERSDLSADINEHLIVELYSK >gi|296918647|gb|GG773053.1| GENE 45 29345 - 30334 990 329 aa, chain + ## HITS:1 COG:ECs4160 KEGG:ns NR:ns ## COG: ECs4160 COG0202 # Protein_GI_number: 15833414 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 613 100.0 1e-175 MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPV ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL TEIKDVLASRGLSLGMRLENWPPASIADE >gi|296918647|gb|GG773053.1| GENE 46 30375 - 30758 636 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803821|ref|NP_289855.1| 50S ribosomal protein L17 [Escherichia coli O157:H7 EDL933] # 1 127 1 127 127 249 100 2e-65 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSV ANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSE KAEAAAE >gi|296918647|gb|GG773053.1| GENE 47 30923 - 31291 282 122 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3681 NR:ns ## KEGG: ECS88_3681 # Name: yhdN # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 122 1 122 122 229 100.0 2e-59 MWLLDQWAERHIAEAQAKGEFDNLVGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL EHRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKIN DN >gi|296918647|gb|GG773053.1| GENE 48 31302 - 31727 414 141 aa, chain + ## HITS:1 COG:ECs4157 KEGG:ns NR:ns ## COG: ECs4157 COG0789 # Protein_GI_number: 15833411 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 246 99.0 9e-66 MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFS LESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDTCCGTAHS SVYCSILEALEQGASGVKSGC >gi|296918647|gb|GG773053.1| GENE 49 31783 - 32001 76 72 aa, chain + ## HITS:1 COG:yhdL KEGG:ns NR:ns ## COG: yhdL COG3036 # Protein_GI_number: 16132253 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 72 1 72 72 127 98.0 4e-30 MSRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGKHGNRGNWEASGKKVNH FFTTGLLLSDAC >gi|296918647|gb|GG773053.1| GENE 50 31998 - 32411 405 137 aa, chain - ## HITS:1 COG:ECs4156 KEGG:ns NR:ns ## COG: ECs4156 COG1970 # Protein_GI_number: 15833410 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 137 1 136 136 238 98.0 2e-63 MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAVT LREAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKLNRKKEEPAAATPAPTKEE VLLTEIRDLLKEQNNRS >gi|296918647|gb|GG773053.1| GENE 51 32541 - 33917 1225 458 aa, chain - ## HITS:1 COG:ECs4155 KEGG:ns NR:ns ## COG: ECs4155 COG0569 # Protein_GI_number: 15833409 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Escherichia coli O157:H7 # 1 458 1 458 458 871 100.0 0 MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFDLRVVQGHGSHPRVLRE AGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSPDYVRDADKLFHSDAVPID HLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKAYYGGPLIGNALSTMREHMPH IDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHIRAVMSELQRLEKPYKRIMLVGG GNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQNTIVFFGDASDQELLAEEHIDQVDL FIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRAYVDLVQGSVIDIAISPQQATISALLS HVRKADIVGVSSLRRGVAEAIEAVAHGDESTSRVVGRVIDEIKLPPGTIIGAVVRGNDVM IANDNLRIEQGDHVIMFLTDKKFITDVERLFQPSPFFL >gi|296918647|gb|GG773053.1| GENE 52 33939 - 35201 1096 420 aa, chain - ## HITS:1 COG:sun KEGG:ns NR:ns ## COG: sun COG0144 # Protein_GI_number: 16131168 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Escherichia coli K12 # 1 420 10 429 429 828 97.0 0 MAAQAIEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARP MTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQRQQ DELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNRTHHSRDSWL ALLDEAGMKGFPHADYPDAVQLETPAPVHALPGFEEGWVTVQDASAQGCMTWLAPQNGEH ILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWSHLKSGGT LVYATCSMLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK >gi|296918647|gb|GG773053.1| GENE 53 35280 - 36227 858 315 aa, chain - ## HITS:1 COG:ECs4153 KEGG:ns NR:ns ## COG: ECs4153 COG0223 # Protein_GI_number: 15833407 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Escherichia coli O157:H7 # 1 314 1 314 315 603 97.0 1e-172 MSESLRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAGRGKKLMPSPVKVLAEDKG LPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRG AAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGL ITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLE IEGQPVKVWKASVIDTTTKAAPGTILEANKQGIQVATGDGILNLLSMQPAGKKAMSVQDL LNSRREWFVPGNRLA >gi|296918647|gb|GG773053.1| GENE 54 36242 - 36751 526 169 aa, chain - ## HITS:1 COG:ECs4152 KEGG:ns NR:ns ## COG: ECs4152 COG0242 # Protein_GI_number: 15833406 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 291 100.0 3e-79 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA >gi|296918647|gb|GG773053.1| GENE 55 36881 - 38005 324 374 aa, chain + ## HITS:1 COG:smf KEGG:ns NR:ns ## COG: smf COG0758 # Protein_GI_number: 16132235 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Escherichia coli K12 # 1 374 1 374 374 737 98.0 0 MVDTEIWLRLISISSLYGDDMVRIAHWLAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSI ESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSW YGERWRRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA PLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS PDQEDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR LRRACHVRRTNVFV >gi|296918647|gb|GG773053.1| GENE 56 37977 - 38450 591 157 aa, chain + ## HITS:1 COG:ECs4150 KEGG:ns NR:ns ## COG: ECs4150 COG2922 # Protein_GI_number: 15833404 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 272 100.0 2e-73 MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNALLWLEKLADYQEGLAEP MQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDTAEFDL EDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH >gi|296918647|gb|GG773053.1| GENE 57 38479 - 39021 201 180 aa, chain + ## HITS:1 COG:ZyrdD KEGG:ns NR:ns ## COG: ZyrdD COG0551 # Protein_GI_number: 15803811 # Func_class: L Replication, recombination and repair # Function: Zn-finger domain associated with topoisomerase type I # Organism: Escherichia coli O157:H7 EDL933 # 9 180 1 172 172 325 98.0 2e-89 MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLE GQVCPACGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDETAITCPQCRTGHLVQRRSR YGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKTAQGVKHFCASKQCGKPISAE >gi|296918647|gb|GG773053.1| GENE 58 39026 - 39598 320 190 aa, chain + ## HITS:1 COG:ECs4148 KEGG:ns NR:ns ## COG: ECs4148 COG0009 # Protein_GI_number: 15833402 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 373 99.0 1e-103 MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLIL IAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTD HPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRD ALTGELFRQG >gi|296918647|gb|GG773053.1| GENE 59 39603 - 40421 412 272 aa, chain + ## HITS:1 COG:aroE KEGG:ns NR:ns ## COG: aroE COG0169 # Protein_GI_number: 16131162 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Escherichia coli K12 # 1 272 1 272 272 541 97.0 1e-154 METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANV TVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLLGDNTDGIGLLSDLERLSFIRPGL RILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELTKLFAHTGSIQALGMDELEGHE FDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGM LVAQAAHAFLLWHGVLPDVEPVIKLLQQELSA >gi|296918647|gb|GG773053.1| GENE 60 40502 - 40675 106 57 aa, chain + ## HITS:1 COG:no KEGG:c4041 NR:ns ## KEGG: c4041 # Name: yrdB # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 57 29 85 85 101 100.0 8e-21 MQLTCAISGESLAYRFTGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP >gi|296918647|gb|GG773053.1| GENE 61 40651 - 41277 440 208 aa, chain - ## HITS:1 COG:ECs4145 KEGG:ns NR:ns ## COG: ECs4145 COG0663 # Protein_GI_number: 15833399 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli O157:H7 # 1 208 49 256 256 429 99.0 1e-120 MLKDLHKANNAPKVISKSFIVEVSMSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADD VGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLH GCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDE EKAGLRYSANNYVKWKDEYLDQGNQTQP Prediction of potential genes in microbial genomes Time: Thu Jul 7 14:00:45 2011 Seq name: gi|296918646|gb|GG773054.1| Escherichia coli MS 110-3 genomic scaffold Scfld1073, whole genome shotgun sequence Length of sequence - 4148 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 4, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 245 71 ## pECS88_0040 hypothetical protein 2 1 Op 2 . + CDS 314 - 889 151 ## pECS88_0041 hypothetical protein 3 1 Op 3 . + CDS 902 - 1114 146 ## gi|310286491|ref|YP_003937752.1| hypothetical protein ETN48_p0164 + Term 1123 - 1151 0.6 - Term 1103 - 1145 0.1 4 2 Tu 1 . - CDS 1375 - 2346 506 ## COG3547 Transposase and inactivated derivatives 5 3 Tu 1 . + CDS 2748 - 3173 511 ## APECO1_O1CoBM7 hypothetical protein + Prom 3188 - 3247 4.6 6 4 Op 1 . + CDS 3332 - 3646 248 ## EcSMS35_A0064 hypothetical protein 7 4 Op 2 . + CDS 3646 - 3828 211 ## EcSMS35_A0063 hypothetical protein + Term 3954 - 4011 14.7 Predicted protein(s) >gi|296918646|gb|GG773054.1| GENE 1 3 - 245 71 80 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0040 NR:ns ## KEGG: pECS88_0040 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 80 36 115 115 155 100.0 4e-37 GLVGVQLCGRRVVCGLCRASILAGLALMQATVLMGGGYLKKVRDNIMESPISSKKLTRFD TTLTGCFERDISRVGHRHFK >gi|296918646|gb|GG773054.1| GENE 2 314 - 889 151 191 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0041 NR:ns ## KEGG: pECS88_0041 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 191 3 193 193 389 100.0 1e-107 MDEEKTRAEVAHIEFISYGTSRIFDRRMRSLDWKRKVVTFLGVFVPLMIGCAVLSFGLEA PFLPLCITIAGVASIMQLGFSLWSLVSGWDRSYSDCMASVKENTAIYNLAGSVRKKIGKL DEAKLEILIDDLTEKFERREQEDLTLCVSDKELRYANRMSCFYFKKKCHICNVVPLTLKP GKCVCDGCGKF >gi|296918646|gb|GG773054.1| GENE 3 902 - 1114 146 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|310286491|ref|YP_003937752.1| ## NR: gi|310286491|ref|YP_003937752.1| hypothetical protein ETN48_p0164 [Escherichia coli] protein of unknown function [Escherichia coli] hypothetical protein HMPREF9539_05494 [Escherichia coli MS 110-3] # 1 70 1 70 70 134 100.0 2e-30 MSSAKILNAYFEASEEDRKEFLRVLSHFYKDNRRVPLQEGMESFAVNESIRKSQSINFAP MQGGCPLCGK >gi|296918646|gb|GG773054.1| GENE 4 1375 - 2346 506 323 aa, chain - ## HITS:1 COG:all0306 KEGG:ns NR:ns ## COG: all0306 COG3547 # Protein_GI_number: 17227802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 9 322 8 317 320 213 39.0 5e-55 MSQPNLQCMGIDVAKLSLDIATTDTIEPFTVGNDEDGFAVITDKLKHTKINLILMEATGG LEAAIACKLQSEGYDVVVINPRQARDFARSMGYLAKTDKLDAAMLAQLALVIDRHPDRSR YIRHLPDEARAVLAAMVVRRRQLNHMLVAERNRLYPSHPQSRKSIDNIIDALQNELDRIN EQMKQHMTAFFQEQARLIGSVKGVGDITVASLIAELPEQGKLNRREISALTGVAPLNRDS GKMRGKRTTFGGRAGVRATLNMAALVATQFNPAIKLFYQRLLAAGKPKKLALVACMRKLI TILNTMLRKGEEWNASFQSQVIS >gi|296918646|gb|GG773054.1| GENE 5 2748 - 3173 511 141 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM7 NR:ns ## KEGG: APECO1_O1CoBM7 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 141 31 171 171 296 100.0 2e-79 MQYAKPVTLNVEECDRLSFLPYLFGNDFLYAEAYVYALAQKMMPEYQGGFWHFIRLPDGG GYMMPDGDRFHLVNGENWFDRTVSADAAGIILTSLVINRQLWLYHDSGNAGLTHLYRMRD AQLWSHIEFHPECNAIYAALD >gi|296918646|gb|GG773054.1| GENE 6 3332 - 3646 248 104 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0064 NR:ns ## KEGG: EcSMS35_A0064 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 104 20 123 123 185 100.0 5e-46 MAQDWNLSDDELETVMQRLDDAFVYGACDRVVSDIVNELMEEKRVNRLVTVPAVLLEKVM VMAGSEIYRLHAVGSENGGDGDAFVREEREIMRVMRQALDGENG >gi|296918646|gb|GG773054.1| GENE 7 3646 - 3828 211 60 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0063 NR:ns ## KEGG: EcSMS35_A0063 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 60 1 60 60 113 100.0 2e-24 MNISTETREILRNYKTVINARRREMGQKPLTTAQIVDEICDFVTNQQAVFLGGHYILQGS Prediction of potential genes in microbial genomes Time: Thu Jul 7 14:01:05 2011 Seq name: gi|296918645|gb|GG773055.1| Escherichia coli MS 110-3 genomic scaffold Scfld1096, whole genome shotgun sequence Length of sequence - 7702 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 3, operones - 2 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 334 - 393 15.6 1 1 Op 1 . - CDS 408 - 623 173 ## pECS88_0057 modulator of post-segregation killing protein - Prom 734 - 793 2.9 - Term 684 - 719 1.1 2 1 Op 2 . - CDS 841 - 1560 499 ## pECS88_0056 plasmid SOS inhibition protein A 3 1 Op 3 . - CDS 1557 - 1991 429 ## pECS88_0055 plasmid SOS inhibition protein B 4 1 Op 4 4/0.000 - CDS 2046 - 3284 751 ## COG1475 Predicted transcriptional regulators 5 1 Op 5 . - CDS 3017 - 4045 576 ## COG1475 Predicted transcriptional regulators - Prom 4067 - 4126 3.3 6 2 Op 1 . - CDS 4138 - 4371 235 ## pECS88_0051 hypothetical protein 7 2 Op 2 . - CDS 4334 - 4822 395 ## COG0629 Single-stranded DNA-binding protein 8 3 Tu 1 . - CDS 5074 - 6975 329 ## COG3344 Retron-type reverse transcriptase - Prom 7122 - 7181 2.3 Predicted protein(s) >gi|296918645|gb|GG773055.1| GENE 1 408 - 623 173 71 aa, chain - ## HITS:1 COG:no KEGG:pECS88_0057 NR:ns ## KEGG: pECS88_0057 # Name: flmC # Def: modulator of post-segregation killing protein # Organism: E.coli_S88 # Pathway: not_defined # 1 71 29 99 99 143 100.0 2e-33 MSDQQQYGLLPCLMQGGVNHETTGKRPYLVRINRVLHVVNIHTPDPESSVRSPAEGRIQG GYGKFGLRIQR >gi|296918645|gb|GG773055.1| GENE 2 841 - 1560 499 239 aa, chain - ## HITS:1 COG:no KEGG:pECS88_0056 NR:ns ## KEGG: pECS88_0056 # Name: psiA # Def: plasmid SOS inhibition protein A # Organism: E.coli_S88 # Pathway: not_defined # 1 239 1 239 239 425 100.0 1e-117 MNARSRALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR FFMPSLTAEELHGNRLQWLCAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHK SALVMQKYSRQQAREAEQKARAYQVLVAQAEIELAFHSPETVGSWHARWSDRVAEHDLEP LFWQWGERFPSLAGMERWQWQDMPFWQVIAEASLAAREAGHAVREMERWMVPNKLREAA >gi|296918645|gb|GG773055.1| GENE 3 1557 - 1991 429 144 aa, chain - ## HITS:1 COG:no KEGG:pECS88_0055 NR:ns ## KEGG: pECS88_0055 # Name: psiB # Def: plasmid SOS inhibition protein B # Organism: E.coli_S88 # Pathway: not_defined # 1 144 2 145 145 290 100.0 2e-77 MKTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALA ASLDAQGYSVNDIIHILMAEGGQV >gi|296918645|gb|GG773055.1| GENE 4 2046 - 3284 751 412 aa, chain - ## HITS:1 COG:PSLT068 KEGG:ns NR:ns ## COG: PSLT068 COG1475 # Protein_GI_number: 17233437 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 4 411 247 655 665 507 62.0 1e-143 MAGNSKFRFVGADAFSPDELRTDLFSDDGDGYVDRVALDAALLEKLQAVAEHLREAEGWE WCAGRMEPVGECREDAGTYRCLPEPDAVLTEAEEERLNELMTRYDALENQCEESDLLEAE MKLMRCMAKVRAWTPEMRTGSGVVVSWRYGNVCVQRGVQLRSEDDAADDADRTEQVQEKA SVEEISLPLLTKMSSERTLAVQAALMQQPDKSLALLAWTLCLNVFGSGAYSKPAQISLEC KHYSLTSDAPSGKEGAAFMAMMAEKARLAALLPEGWSRDMTTFLSLSQEVLLSLLSFCTA CSIHGVQTRECGHTSRSPLDTLESAIGFHMRDWWQPTKANFFGHLKKPQIIAALNDAGLS GAARDAEKMKKGDAAEHAEHHMKDNRWVPGWMCAPHPQTDTTERTDNLADAA >gi|296918645|gb|GG773055.1| GENE 5 3017 - 4045 576 342 aa, chain - ## HITS:1 COG:PSLT068 KEGG:ns NR:ns ## COG: PSLT068 COG1475 # Protein_GI_number: 17233437 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 257 1 260 665 337 68.0 2e-92 MSVTESKTKTERKSSRKPSKEQETALSALLAQTAEVSVPLASLIKSPLNVRTVPYSAESV SELAESIKGVGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERGIIPADWPVRVKVIPQ ELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRYVQRMLKLADLA PVILDALAEDRITTEHCQALALENDTARQVQVFEAACQSGWGGKPDVRVIRNLITESEVA VAGNSKFRGGGKWRWRGTVNSASWGLMLSHLTNCVLICSAMTGTVMSTAWRSMLPCWKNS RLSLNTFGKPKAGNGAPDAWSLSVSAVRMPEHTAVCRSRTRC >gi|296918645|gb|GG773055.1| GENE 6 4138 - 4371 235 77 aa, chain - ## HITS:1 COG:no KEGG:pECS88_0051 NR:ns ## KEGG: pECS88_0051 # Name: yubL # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 77 10 86 86 156 100.0 3e-37 MSEYFRILQGLPDGPFTRKHAEAVAAQYRNVFIEDDHGEQFRLVVRNNGAMVWRTWNFED GAGYWMNHAIRDFGILK >gi|296918645|gb|GG773055.1| GENE 7 4334 - 4822 395 162 aa, chain - ## HITS:1 COG:BU545 KEGG:ns NR:ns ## COG: BU545 COG0629 # Protein_GI_number: 15617138 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Buchnera sp. APS # 2 65 50 114 171 101 73.0 7e-22 MREQTEWHRVVLFGKLAEVAGEYLRKGAQVYIEGQLRTRSWEDNGITRYVTEILVKTTGT MQMLGRVAGAQTQPEEGQQFSGQSQPEPQAEAGTKKGGAKTKGRGRKATQPESQPQPPES DDYGFSDDTRSERLTVTTAPSCAGHHRRDEDERIFQNTSGAA >gi|296918645|gb|GG773055.1| GENE 8 5074 - 6975 329 633 aa, chain - ## HITS:1 COG:Q0055 KEGG:ns NR:ns ## COG: Q0055 COG3344 # Protein_GI_number: 6226521 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Saccharomyces cerevisiae # 26 609 285 848 854 296 32.0 1e-79 MLPDELEKRLDGIEDASKKGYPVRNLYKIACEPGLWLQAYVNIRANAGALTQGVSTDTID GFSIERAEKLAKTLRSREYVAKPVRRVQIPKKDGKTRPLGIPGGDDKLAQEVARIILERV YEPVFSEHSHGFRPKRSCETALRSIRPVWNGVKWIVDVDIKGFFDNIPHKLLLNTLAEKI KDKNFLKLIEQWLKAGYVDNWKYHRSYSGTPQGGIISPLLANIYLDKLDRFVEQNLIPAY TSGTKRRANPDMNRLAHKIHKLRKKVDGMATDSESEKEAIKKEIERLLEEKRSIPSQVMN DPNFRRMYYVRYADDFVIGVIGSKKDAEHISRQVRNFITTSLGLEVNEAKTRIRHISEGV NFLGYEIRQADAKKLLKQKMQGRHALRRSTTGIVQLFVPDNIAAKFCHQKKYGCYENVKA VHRSSLQNLSEAEIVLTFNAEMRGLANYYSLALDMKYKLSKLYFIWQISLFKTLANKRRS SVNKIAKSLRQNNGDLAITVQAKNGSRKIEVFKLKHVNRNRTTIVDTEPRTAHITTRTTE IMRRLGARICEYCAKTGRCEVHHVRKLKDLKKGRKAGYKPSLWQLMMIARRRKTMILCAS CHDKLHSGKLPDLRQEKGRILLQPPVSSGDSAK Prediction of potential genes in microbial genomes Time: Thu Jul 7 14:01:17 2011 Seq name: gi|296918644|gb|GG773056.1| Escherichia coli MS 110-3 genomic scaffold Scfld1098, whole genome shotgun sequence Length of sequence - 499 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 241 - 498 106 ## COG3765 Chain length determinant protein Predicted protein(s) >gi|296918644|gb|GG773056.1| GENE 1 241 - 498 106 85 aa, chain - ## HITS:1 COG:fepE KEGG:ns NR:ns ## COG: fepE COG3765 # Protein_GI_number: 16128570 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli K12 # 1 84 258 341 377 119 66.0 1e-27 SNGQIMKDDPDFPVALGSDGIATKLNIKKSIKDVSELSGELRNRQYVVNQLVVAKVGDVD FMPFQYQLSPTLPVRKDGPSNAIIS Prediction of potential genes in microbial genomes Time: Thu Jul 7 14:01:18 2011 Seq name: gi|296918643|gb|GG773057.1| Escherichia coli MS 110-3 genomic scaffold Scfld1104, whole genome shotgun sequence Length of sequence - 1143 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 194 - 409 113 ## gi|315284549|gb|EFU43994.1| hypothetical protein HMPREF9539_05515 Predicted protein(s) >gi|296918643|gb|GG773057.1| GENE 1 194 - 409 113 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315284549|gb|EFU43994.1| ## NR: gi|315284549|gb|EFU43994.1| hypothetical protein HMPREF9539_05515 [Escherichia coli MS 110-3] # 1 71 9 79 79 107 100.0 2e-22 MEKRQRRILYQPFPISAQPLYLAIREQVTPAAVSRQERSDRVSEEASFHRLQYFALTSHS RIFPLPHEALS Prediction of potential genes in microbial genomes Time: Thu Jul 7 14:01:25 2011 Seq name: gi|296918642|gb|GG773058.1| Escherichia coli MS 110-3 genomic scaffold Scfld1116, whole genome shotgun sequence Length of sequence - 9550 bp Number of predicted genes - 12, with homology - 12 Number of transcription units - 9, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 880 - 914 5.3 1 1 Tu 1 . - CDS 922 - 1101 80 ## APECO1_246 hypothetical protein + Prom 807 - 866 2.0 2 2 Tu 1 . + CDS 1006 - 1188 157 ## ECS88_1189 hypothetical protein + Term 1225 - 1257 -0.4 3 3 Op 1 . - CDS 1163 - 1414 119 ## ECUMN_1341 hypothetical protein - Term 1436 - 1475 2.5 4 3 Op 2 . - CDS 1490 - 1837 140 ## UTI89_C1305 lambdoid prophage DLP12 Bor-like protein - Prom 1871 - 1930 7.0 + Prom 2190 - 2249 2.6 5 4 Op 1 23/0.000 + CDS 2464 - 2829 190 ## COG2963 Transposase and inactivated derivatives + Term 2930 - 2970 0.8 6 4 Op 2 . + CDS 3312 - 3692 115 ## COG2801 Transposase and inactivated derivatives + Term 3753 - 3797 0.2 - Term 3713 - 3752 -0.2 7 5 Tu 1 . - CDS 3863 - 4027 61 ## COG3547 Transposase and inactivated derivatives - Prom 4241 - 4300 4.5 + Prom 4197 - 4256 1.8 8 6 Tu 1 . + CDS 4277 - 4501 87 ## APECO1_O1CoBM150 hypothetical protein 9 7 Tu 1 . + CDS 4916 - 6109 571 ## COG0523 Putative GTPases (G3E family) + Prom 6538 - 6597 3.5 10 8 Tu 1 . + CDS 6746 - 7612 426 ## pECS88_0139 putative transposase (fragment) 11 9 Op 1 . + CDS 7749 - 8135 137 ## APECO1_O1CoBM154 hypothetical protein + Term 8184 - 8226 2.3 + Prom 8223 - 8282 4.2 12 9 Op 2 . + CDS 8370 - 9311 99 ## pECS88_0143 hypothetical protein + Term 9388 - 9457 30.5 Predicted protein(s) >gi|296918642|gb|GG773058.1| GENE 1 922 - 1101 80 59 aa, chain - ## HITS:1 COG:no KEGG:APECO1_246 NR:ns ## KEGG: APECO1_246 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 59 59 117 117 107 100.0 1e-22 MVSKSKAHCRRMLQALQQTRAGIFDQLENCQHTLPEYIAISSETSATLIHRVPPEKKKK >gi|296918642|gb|GG773058.1| GENE 2 1006 - 1188 157 60 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1189 NR:ns ## KEGG: ECS88_1189 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 60 1 60 60 100 100.0 3e-20 MLAVFQLVKNTCSRLLQCLQHAAAMRLAFTNHLSFLYQSLRELIMEYQVNADVIGFGYAA >gi|296918642|gb|GG773058.1| GENE 3 1163 - 1414 119 83 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1341 NR:ns ## KEGG: ECUMN_1341 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 83 24 106 106 147 98.0 1e-34 MKIRNILAISLATSSFSCLAFKSSPNVLPGPTNQLTAVESKIIGHFYAPHSTLPGTTITG TCDASPVPGCTCPFCTMLRSQNR >gi|296918642|gb|GG773058.1| GENE 4 1490 - 1837 140 115 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C1305 NR:ns ## KEGG: UTI89_C1305 # Name: ybcU # Def: lambdoid prophage DLP12 Bor-like protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 80 17 96 113 156 100.0 3e-37 MKKMLFSAALAMLITGCAQQTFTVGNKPTAVTPKETITHHFFVSGIGQKKTVDAAKICGG AENVVKTETQQTFVNGLLGFRGGGEKPRGRRPVTCWIDGKDPKTRIIITYSKNRI >gi|296918642|gb|GG773058.1| GENE 5 2464 - 2829 190 121 aa, chain + ## HITS:1 COG:yi21 KEGG:ns NR:ns ## COG: yi21 COG2963 # Protein_GI_number: 16132093 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 121 16 136 136 207 99.0 3e-54 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWCKQYQEGSLTA VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG E >gi|296918642|gb|GG773058.1| GENE 6 3312 - 3692 115 126 aa, chain + ## HITS:1 COG:yi22 KEGG:ns NR:ns ## COG: yi22 COG2801 # Protein_GI_number: 16132094 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 126 176 301 301 259 97.0 9e-70 MLGAVERRFGNELPASPVEWLTDNGSCYRANETRQFARMLGLEPKNTAMRSPESNGIAES FVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSD NRCLEI >gi|296918642|gb|GG773058.1| GENE 7 3863 - 4027 61 54 aa, chain - ## HITS:1 COG:PA0445 KEGG:ns NR:ns ## COG: PA0445 COG3547 # Protein_GI_number: 15595642 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Pseudomonas aeruginosa # 1 51 51 101 338 63 52.0 7e-11 MEACEDAHYMARKFSEMRHKTKLIPPHFVQPFVKINKNDFFEAETICEVTSSHQ >gi|296918642|gb|GG773058.1| GENE 8 4277 - 4501 87 74 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM150 NR:ns ## KEGG: APECO1_O1CoBM150 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 74 1 74 74 143 100.0 3e-33 MNWLRHTYQETLFPGRTYPPETPLLSGLKFFGIYRTQKNADITDRLLSVPNSADPKAMYL STERVPDILGTDVF >gi|296918642|gb|GG773058.1| GENE 9 4916 - 6109 571 397 aa, chain + ## HITS:1 COG:BH1790 KEGG:ns NR:ns ## COG: BH1790 COG0523 # Protein_GI_number: 15614353 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Bacillus halodurans # 6 390 8 390 395 164 31.0 3e-40 METTSVIILNGFLGAGKTTLLKNLLIQAHEKQLSVSVIVNDMSELDVDGVLIANTDIVDA KDNNFVSITADSISSPAGLKKMDLAINHLLDHNKPDVMLIETSGSSHPLPLVKYLRRHSR VRLKAFLTLVDTVMLHEDYNDGKKLIPTLQENLRHNKRGLENLLAEQIMFCNRLLLTRND RLPFDIISAVAKAIHPLNPSVDVLAVSWGNIELSTLLAIPDYNFDRVELLISELEALVGN MDTPCNNEELIWRVIRDDRPFHPQRLWDTCHRFMGMGVYRSKGFFWLPGRDDLALLWNQS AGSISLALIGYWKAGVLEHTDNNLTREERSALQRHIDTASGRFGDRCCQLTIIGNATEVN DFTHALSLCLLTEEEIQWWMSGGVFPDPWPQKVTRLS >gi|296918642|gb|GG773058.1| GENE 10 6746 - 7612 426 288 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0139 NR:ns ## KEGG: pECS88_0139 # Name: not_defined # Def: putative transposase (fragment) # Organism: E.coli_S88 # Pathway: not_defined # 1 288 1 288 288 585 100.0 1e-166 MAINDAGMFTVKEINRLKILQDVIDRNIRPGQAAEMLGITPRHCSRLLKRYRQYGPLGMN NQSRGRTGNRLLPASLTDQALSIIREHYRDFGPTLAREKLEEVHGLVLGKETIRRLMIKA GLWIPRRQRAPKIHQPRYRRPCTGELIQIDGCDHHWFENRGRPCSALVYVDDATSRLMHL LFVKSESTFTYFEATRGYIEKYGKPMILYSDKASVFRVNNKHATTGPGETQFARAMRCLN ITPLCAETSQAKGRVERAHLTLQDRLVKELRLKGICTIEAANAFAEGL >gi|296918642|gb|GG773058.1| GENE 11 7749 - 8135 137 128 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM154 NR:ns ## KEGG: APECO1_O1CoBM154 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 128 1 128 128 241 100.0 1e-62 MLYLIEDNEYSRRAIGKYIDVWHYPDGHKELRLNGVLLPYSTYDRLSEVDPVAIVDNKRL GHVLDVARQVQRKRDNNRSQSLPCSGDEPSRRRHAPSINKSQRSLNEDDLLEAMIKLQGS SEAIFGKR >gi|296918642|gb|GG773058.1| GENE 12 8370 - 9311 99 313 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0143 NR:ns ## KEGG: pECS88_0143 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 313 1 313 313 619 100.0 1e-176 MAIINIYSKRQRKIRGEVNDVYQYNNIPHALRVQIIKIITDSIGFPSSNERYTSYRNEAD KVYAYIHEILSKEYGVFSLKEFAKNDFDALVDFFLKERNTEKCLDFIEICFQILVSHVAK NHYEFKDITSQSPGDAVIELNERFREHGVGYQFESEEIIRIDSQLIHADVVKPTLILLSG EPLFEGANDEFLAAHEHYRHKRYKECLNDCLKSFESIMKAIHDKNNWKYSPNDTASKLIN SCLSQNLIPAYLQSQFTSLKTMLETGIPTIRNKNAGHGQGADIKEVPEELVSYMLHLTAT NLLFLLKCEKNIK Prediction of potential genes in microbial genomes Time: Thu Jul 7 14:01:48 2011 Seq name: gi|296918641|gb|GG773059.1| Escherichia coli MS 110-3 genomic scaffold Scfld1239, whole genome shotgun sequence Length of sequence - 613 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 52 - 348 110 ## ECA2908 putative plasmid replication protein + Term 353 - 398 0.7 Predicted protein(s) >gi|296918641|gb|GG773059.1| GENE 1 52 - 348 110 98 aa, chain + ## HITS:1 COG:no KEGG:ECA2908 NR:ns ## KEGG: ECA2908 # Name: not_defined # Def: putative plasmid replication protein # Organism: E.carotovora # Pathway: not_defined # 1 89 12 95 254 104 62.0 1e-21 MNPFVFEKELKIETKTRNLTVGRNTELVRKDEKDDSEESESYFTNIIQQKEVDKEEFIKL FTSQIKVYFDLTKTAYKIFLIILSLYQKAPPPLCFIDM