Prediction of potential genes in microbial genomes Time: Sun May 15 21:34:59 2011 Seq name: gi|299857063|gb|ADWS01000001.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont0.1, whole genome shotgun sequence Length of sequence - 380848 bp Number of predicted genes - 334, with homology - 331 Number of transcription units - 167, operones - 71 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 138 - 168 3.0 1 1 Tu 1 . - CDS 352 - 990 704 ## COG0225 Peptide methionine sulfoxide reductase - Prom 1046 - 1105 3.3 + Prom 1005 - 1064 2.8 2 2 Op 1 16/0.000 + CDS 1196 - 2929 1571 ## COG0729 Outer membrane protein 3 2 Op 2 6/0.147 + CDS 2926 - 6705 4200 ## COG2911 Uncharacterized protein conserved in bacteria 4 2 Op 3 . + CDS 6708 - 7049 197 ## COG2105 Uncharacterized conserved protein + Term 7059 - 7094 4.1 + Prom 7067 - 7126 5.9 5 3 Op 1 8/0.067 + CDS 7262 - 7513 294 ## COG2336 Growth regulator 6 3 Op 2 . + CDS 7507 - 7857 333 ## COG2337 Growth inhibitor - Term 7847 - 7889 -0.6 7 4 Tu 1 . - CDS 7937 - 8467 747 ## COG0221 Inorganic pyrophosphatase - Prom 8664 - 8723 4.7 + Prom 8549 - 8608 4.3 8 5 Tu 1 . + CDS 8777 - 9733 1106 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 9791 - 9839 0.1 + Prom 9789 - 9848 4.4 9 6 Op 1 21/0.000 + CDS 10043 - 11545 207 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 10 6 Op 2 11/0.040 + CDS 11559 - 12581 1105 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 11 6 Op 3 . + CDS 12568 - 13563 1153 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components - Term 13555 - 13588 6.1 12 7 Tu 1 . - CDS 13596 - 14594 1119 ## COG0158 Fructose-1,6-bisphosphatase - Prom 14650 - 14709 2.2 + Prom 14542 - 14601 4.9 13 8 Tu 1 . + CDS 14770 - 16143 1591 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Term 16191 - 16242 5.9 14 9 Tu 1 . - CDS 16299 - 16850 776 ## COG3028 Uncharacterized protein conserved in bacteria - Prom 16870 - 16929 7.1 + Prom 16841 - 16900 3.1 15 10 Op 1 2/0.720 + CDS 16944 - 18296 1456 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs + Term 18302 - 18334 2.6 16 10 Op 2 . + CDS 18351 - 18737 542 ## COG3783 Soluble cytochrome b562 + Term 18746 - 18789 11.7 17 11 Tu 1 . - CDS 18782 - 19246 417 ## COG0602 Organic radical activating enzymes - Prom 19310 - 19369 6.1 - Term 19284 - 19328 4.1 18 12 Tu 1 . - CDS 19405 - 21543 2524 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 21722 - 21781 6.5 - Term 21887 - 21924 4.4 19 13 Op 1 9/0.067 - CDS 21937 - 23592 1302 ## COG0366 Glycosidases 20 13 Op 2 7/0.093 - CDS 23642 - 25060 1519 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 25112 - 25171 4.4 - Term 25116 - 25142 -1.0 21 14 Tu 1 . - CDS 25182 - 26129 837 ## COG1609 Transcriptional regulators - Prom 26163 - 26222 7.1 22 15 Tu 1 . + CDS 26508 - 29204 2724 ## COG0474 Cation transport ATPase + Term 29327 - 29363 2.4 23 16 Tu 1 6/0.147 - CDS 29410 - 29796 567 ## COG0251 Putative translation initiation inhibitor, yjgF family - Term 29811 - 29850 5.0 24 17 Op 1 19/0.000 - CDS 29869 - 30330 536 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 25 17 Op 2 . - CDS 30343 - 31278 1091 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 26 18 Tu 1 . - CDS 31697 - 32092 263 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 32160 - 32219 2.0 - Term 32165 - 32204 2.1 27 19 Tu 1 . - CDS 32223 - 32897 227 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 32921 - 32980 5.5 + Prom 32883 - 32942 5.0 28 20 Tu 1 . + CDS 32968 - 33561 336 ## COG1309 Transcriptional regulator + Prom 33621 - 33680 3.3 29 21 Tu 1 . + CDS 33706 - 34158 557 ## COG2731 Beta-galactosidase, beta subunit + Term 34167 - 34206 4.3 + Prom 34173 - 34232 7.8 30 22 Op 1 . + CDS 34281 - 34859 127 ## ECO26_5422 hypothetical protein 31 22 Op 2 . + CDS 34860 - 35879 443 ## B21_04083 hypothetical protein + Term 35890 - 35930 2.7 - Term 35876 - 35920 6.0 32 23 Tu 1 . - CDS 35937 - 36941 1000 ## COG0078 Ornithine carbamoyltransferase - Prom 36975 - 37034 6.5 + Prom 36927 - 36986 3.5 33 24 Tu 1 . + CDS 37103 - 37519 737 ## COG3076 Uncharacterized protein conserved in bacteria + Term 37530 - 37576 6.9 - Term 37522 - 37559 2.4 34 25 Tu 1 . - CDS 37566 - 38069 493 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 38197 - 38256 9.1 + Prom 38041 - 38100 5.7 35 26 Tu 1 . + CDS 38262 - 39458 409 ## COG4269 Predicted membrane protein + Term 39470 - 39503 5.2 - Term 39456 - 39492 7.2 36 27 Op 1 5/0.213 - CDS 39512 - 42367 3505 ## COG0525 Valyl-tRNA synthetase 37 27 Op 2 12/0.040 - CDS 42367 - 42810 454 ## COG2927 DNA polymerase III, chi subunit - Prom 42980 - 43039 3.4 38 28 Tu 1 . - CDS 43071 - 44582 1690 ## COG0260 Leucyl aminopeptidase - Prom 44741 - 44800 5.4 + Prom 44762 - 44821 3.8 39 29 Op 1 22/0.000 + CDS 44870 - 45949 916 ## COG0795 Predicted permeases 40 29 Op 2 . + CDS 45949 - 47031 1433 ## COG0795 Predicted permeases + Term 47045 - 47080 6.0 - Term 47033 - 47068 6.0 41 30 Op 1 1/0.893 - CDS 47192 - 48694 1435 ## COG0433 Predicted ATPase 42 30 Op 2 2/0.720 - CDS 48772 - 49770 778 ## COG1609 Transcriptional regulators 43 30 Op 3 5/0.213 - CDS 49837 - 51156 1267 ## COG2610 H+/gluconate symporter and related permeases - Term 51173 - 51203 3.0 44 31 Op 1 10/0.067 - CDS 51221 - 51985 863 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 45 31 Op 2 . - CDS 52009 - 53040 839 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 53133 - 53192 11.7 + Prom 53172 - 53231 3.7 46 32 Tu 1 . + CDS 53257 - 53820 405 ## COG3265 Gluconate kinase - Term 53778 - 53814 3.0 47 33 Tu 1 . - CDS 53824 - 54843 1133 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 55066 - 55125 80.3 + TRNA 55039 - 55123 79.1 # Leu CAA 0 0 + Prom 55048 - 55107 80.4 48 34 Tu 1 . + CDS 55310 - 56575 388 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 + Term 56579 - 56611 5.0 - Term 56851 - 56882 0.8 49 35 Tu 1 . - CDS 56976 - 57935 551 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 58024 - 58083 2.9 - Term 58014 - 58050 -1.0 50 36 Tu 1 . - CDS 58088 - 58318 96 ## 51 37 Tu 1 . - CDS 59403 - 60731 752 ## COG3385 FOG: Transposase and inactivated derivatives - Prom 60849 - 60908 2.9 + Prom 61265 - 61324 4.7 52 38 Op 1 21/0.000 + CDS 61358 - 62266 166 ## COG0477 Permeases of the major facilitator superfamily 53 38 Op 2 5/0.213 + CDS 62263 - 62574 148 ## COG0477 Permeases of the major facilitator superfamily 54 38 Op 3 . + CDS 62586 - 63704 357 ## COG0673 Predicted dehydrogenases and related proteins + Term 63714 - 63750 4.0 55 39 Tu 1 . - CDS 63925 - 64182 154 ## ECBD_3760 hypothetical protein 56 40 Op 1 . + CDS 64160 - 64408 139 ## B21_04108 hypothetical protein 57 40 Op 2 23/0.000 + CDS 64496 - 64768 229 ## COG2963 Transposase and inactivated derivatives 58 40 Op 3 11/0.040 + CDS 65010 - 65423 227 ## COG2801 Transposase and inactivated derivatives 59 40 Op 4 . + CDS 65456 - 65662 99 ## COG2801 Transposase and inactivated derivatives 60 40 Op 5 . + CDS 65745 - 66002 174 ## EC55989_4958 conserved hypothetical protein; KpLE2 phage-like element + Term 66196 - 66225 2.5 61 41 Op 1 35/0.000 - CDS 66559 - 67326 228 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 62 41 Op 2 20/0.000 - CDS 67327 - 68283 844 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 63 41 Op 3 3/0.520 - CDS 68280 - 69257 588 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 64 41 Op 4 . - CDS 69275 - 70177 929 ## COG4594 ABC-type Fe3+-citrate transport system, periplasmic component - Term 70185 - 70212 1.5 65 41 Op 5 2/0.720 - CDS 70222 - 72546 2306 ## COG4772 Outer membrane receptor for Fe3+-dicitrate 66 41 Op 6 6/0.147 - CDS 72633 - 73586 636 ## COG3712 Fe2+-dicitrate sensor, membrane component 67 41 Op 7 . - CDS 73583 - 74104 368 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog - Prom 74132 - 74191 6.8 + Prom 74622 - 74681 2.0 68 42 Tu 1 . + CDS 74800 - 75093 298 ## COG1662 Transposase and inactivated derivatives, IS1 family 69 43 Op 1 . - CDS 75028 - 75333 268 ## UTI89_C2330 putative colanic acid biosynthesis protein 70 43 Op 2 5/0.213 - CDS 75308 - 76525 1234 ## COG0438 Glycosyltransferase 71 43 Op 3 4/0.360 - CDS 76522 - 77010 454 ## COG1045 Serine acetyltransferase 72 43 Op 4 2/0.720 - CDS 77013 - 77852 680 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 73 43 Op 5 3/0.520 - CDS 77945 - 80107 2635 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis 74 43 Op 6 6/0.147 - CDS 80110 - 80553 423 ## COG0394 Protein-tyrosine-phosphatase 75 43 Op 7 . - CDS 80559 - 81698 1023 ## COG1596 Periplasmic protein involved in polysaccharide export - Prom 81783 - 81842 6.0 + Prom 82183 - 82242 5.0 76 44 Tu 1 . + CDS 82357 - 83940 1662 ## COG1253 Hemolysins and related proteins containing CBS domains - Term 83970 - 84020 1.7 77 45 Op 1 4/0.360 - CDS 84214 - 86067 1318 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis 78 45 Op 2 4/0.360 - CDS 86089 - 86670 689 ## COG0717 Deoxycytidine deaminase 79 45 Op 3 . - CDS 86762 - 87403 608 ## COG0572 Uridine kinase + Prom 87600 - 87659 4.6 80 46 Tu 1 . + CDS 87721 - 91038 2654 ## COG2202 FOG: PAS/PAC domain 81 47 Tu 1 . - CDS 91077 - 91934 752 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase + Prom 91981 - 92040 4.1 82 48 Tu 1 . + CDS 92068 - 93420 1491 ## COG0443 Molecular chaperone + Term 93428 - 93478 1.3 - Term 93172 - 93209 -0.3 83 49 Op 1 . - CDS 93432 - 95372 945 ## COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains 84 49 Op 2 . - CDS 95369 - 96049 484 ## ECO103_2550 hypothetical protein 85 49 Op 3 . - CDS 96127 - 96786 484 ## COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain - Prom 96816 - 96875 3.3 + Prom 97871 - 97930 3.4 86 50 Op 1 27/0.000 + CDS 98002 - 99249 1304 ## COG0845 Membrane-fusion protein 87 50 Op 2 10/0.067 + CDS 99249 - 102371 3358 ## COG0841 Cation/multidrug efflux pump 88 50 Op 3 5/0.213 + CDS 102372 - 105449 2997 ## COG0841 Cation/multidrug efflux pump 89 50 Op 4 10/0.067 + CDS 105450 - 106865 1417 ## COG0477 Permeases of the major facilitator superfamily 90 50 Op 5 40/0.000 + CDS 106862 - 108265 1258 ## COG0642 Signal transduction histidine kinase 91 50 Op 6 2/0.720 + CDS 108262 - 108984 810 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 92 51 Tu 1 . + CDS 109175 - 109507 396 ## COG3422 Uncharacterized conserved protein + Term 109515 - 109553 3.3 + Prom 109518 - 109577 3.1 93 52 Op 1 . + CDS 109761 - 110012 287 ## COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain 94 52 Op 2 . + CDS 110014 - 110310 212 ## EC55989_2339 conserved hypothetical protein, putative plasmid stabilisation system protein 95 53 Tu 1 . + CDS 110413 - 111774 1460 ## COG0826 Collagenase and related proteases + Term 111911 - 111950 5.1 96 54 Tu 1 . - CDS 112104 - 112481 229 ## ECSE_2357 hypothetical protein - Prom 112626 - 112685 2.3 + Prom 112750 - 112809 3.4 97 55 Tu 1 . + CDS 112836 - 113735 628 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 98 56 Tu 1 . - CDS 113817 - 114590 514 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 114612 - 114671 3.6 - Term 114656 - 114690 7.4 99 57 Op 1 7/0.093 - CDS 114696 - 115736 648 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 100 57 Op 2 10/0.067 - CDS 115785 - 117140 1462 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 101 57 Op 3 13/0.040 - CDS 117144 - 117428 331 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 102 57 Op 4 4/0.360 - CDS 117459 - 117911 292 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 103 57 Op 5 . - CDS 117921 - 119183 1014 ## COG4573 Predicted tagatose 6-phosphate kinase 104 57 Op 6 . - CDS 119212 - 120066 667 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 120244 - 120303 4.3 - Term 120179 - 120212 5.2 105 58 Tu 1 . - CDS 120375 - 121427 1185 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes - Prom 121574 - 121633 4.0 + Prom 121577 - 121636 3.0 106 59 Op 1 4/0.360 + CDS 121684 - 122961 1396 ## COG0477 Permeases of the major facilitator superfamily 107 59 Op 2 5/0.213 + CDS 122958 - 123962 1017 ## COG1397 ADP-ribosylglycohydrolase 108 59 Op 3 . + CDS 123959 - 124924 842 ## COG0524 Sugar kinases, ribokinase family + Term 124961 - 125017 11.1 109 60 Op 1 2/0.720 - CDS 124898 - 125644 631 ## COG2188 Transcriptional regulators 110 60 Op 2 2/0.720 - CDS 125696 - 126514 545 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 111 60 Op 3 12/0.040 - CDS 126579 - 127379 707 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 112 60 Op 4 1/0.893 - CDS 127376 - 128083 409 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family - Prom 128314 - 128373 3.0 113 61 Tu 1 . - CDS 128387 - 128659 357 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 128683 - 128742 5.0 + Prom 128694 - 128753 3.9 114 62 Tu 1 . + CDS 128780 - 129604 545 ## COG2215 ABC-type uncharacterized transport system, permease component + Term 129687 - 129717 2.0 + Prom 129716 - 129775 3.6 115 63 Tu 1 . + CDS 129823 - 130161 307 ## COG5455 Predicted integral membrane protein - Term 130156 - 130186 4.3 116 64 Tu 1 . - CDS 130243 - 131082 363 ## G2583_2644 putative fimbrial-like adhesin protein - Prom 131199 - 131258 3.4 117 65 Op 1 10/0.067 - CDS 131291 - 133771 1491 ## COG3188 P pilus assembly protein, porin PapC 118 65 Op 2 7/0.093 - CDS 133787 - 134461 395 ## COG3121 P pilus assembly protein, chaperone PapD - Prom 134481 - 134540 4.2 - Term 134473 - 134504 2.5 119 66 Tu 1 . - CDS 134542 - 135084 462 ## COG3539 P pilus assembly protein, pilin FimA - Prom 135116 - 135175 1.6 + Prom 135052 - 135111 4.5 120 67 Tu 1 . + CDS 135217 - 136140 334 ## EFER_3918 transposase, IS903.B + Term 136381 - 136423 10.1 - Term 136362 - 136416 15.2 121 68 Op 1 . - CDS 136443 - 136724 130 ## JW2099 hypothetical protein - Prom 136807 - 136866 2.8 - Term 136885 - 136948 10.0 122 68 Op 2 . - CDS 136987 - 138096 1132 ## COG0489 ATPases involved in chromosome partitioning - Prom 138124 - 138183 2.7 + Prom 138139 - 138198 4.4 123 69 Tu 1 . + CDS 138228 - 140261 2372 ## COG0143 Methionyl-tRNA synthetase + Term 140273 - 140304 2.4 + Prom 140263 - 140322 3.9 124 70 Op 1 . + CDS 140402 - 144196 2059 ## COG3831 Uncharacterized conserved protein 125 70 Op 2 . + CDS 144206 - 147838 2277 ## B21_02004 hypothetical protein + Term 147846 - 147879 3.7 126 71 Tu 1 . + CDS 147899 - 148216 99 ## G2583_2655 hypothetical protein + Term 148278 - 148321 3.0 - Term 148219 - 148256 -1.0 127 72 Tu 1 . - CDS 148326 - 148415 70 ## + Prom 149322 - 149381 7.6 128 73 Op 1 . + CDS 149456 - 150544 876 ## COG0714 MoxR-like ATPases 129 73 Op 2 . + CDS 150555 - 152834 1619 ## c2650 hypothetical protein 130 73 Op 3 . + CDS 152827 - 153963 882 ## ECO103_2597 hypothetical protein 131 73 Op 4 . + CDS 153960 - 155960 903 ## COG2801 Transposase and inactivated derivatives + Term 156039 - 156069 2.0 + Prom 155968 - 156027 1.7 132 74 Tu 1 . + CDS 156085 - 156546 536 ## COG4808 Uncharacterized protein conserved in bacteria + Term 156748 - 156792 4.0 - Term 156536 - 156581 9.2 133 75 Op 1 2/0.720 - CDS 156587 - 157057 440 ## COG4807 Uncharacterized protein conserved in bacteria 134 75 Op 2 9/0.067 - CDS 157104 - 157823 877 ## COG3279 Response regulator of the LytR/AlgR family 135 75 Op 3 . - CDS 157820 - 159505 1212 ## COG3275 Putative regulator of cell autolysis - Prom 159617 - 159676 3.5 + Prom 159581 - 159640 4.4 136 76 Op 1 . + CDS 159727 - 160458 574 ## COG0789 Predicted transcriptional regulators 137 76 Op 2 . + CDS 160518 - 160625 167 ## + Term 160765 - 160804 -0.7 - Term 160318 - 160357 1.2 138 77 Op 1 24/0.000 - CDS 160606 - 161337 863 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 139 77 Op 2 24/0.000 - CDS 161342 - 162268 1098 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components 140 77 Op 3 13/0.040 - CDS 162261 - 163418 1258 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 141 77 Op 4 4/0.360 - CDS 163425 - 164342 1119 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) - Term 164511 - 164541 3.4 142 78 Tu 1 . - CDS 164553 - 166850 2741 ## COG1472 Beta-glucosidase-related glycosidases - Prom 166996 - 167055 4.1 + Prom 166955 - 167014 4.2 143 79 Tu 1 . + CDS 167046 - 168761 1613 ## COG0277 FAD/FMN-containing dehydrogenases + Term 168824 - 168852 1.3 - Term 168755 - 168791 4.3 144 80 Tu 1 . - CDS 168799 - 169689 948 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 169799 - 169858 5.1 - Term 169843 - 169888 11.2 145 81 Tu 1 . - CDS 169902 - 170489 568 ## APECO1_4414 hypothetical protein - Prom 170522 - 170581 3.0 + Prom 170499 - 170558 5.2 146 82 Tu 1 . + CDS 170659 - 171237 617 ## COG0586 Uncharacterized membrane-associated protein + Term 171264 - 171315 4.7 147 83 Op 1 2/0.720 - CDS 171367 - 172128 200 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 148 83 Op 2 1/0.893 - CDS 172181 - 173617 1143 ## COG1538 Outer membrane protein - Prom 173754 - 173813 5.8 149 84 Tu 1 . - CDS 174297 - 175244 860 ## COG0042 tRNA-dihydrouridine synthase - Prom 175410 - 175469 3.4 + Prom 175403 - 175462 3.9 150 85 Op 1 23/0.000 + CDS 175483 - 175881 401 ## COG1380 Putative effector of murein hydrolase LrgA 151 85 Op 2 5/0.213 + CDS 175878 - 176573 737 ## COG1346 Putative effector of murein hydrolase + Prom 176618 - 176677 4.7 152 86 Tu 1 . + CDS 176703 - 177587 950 ## COG0295 Cytidine deaminase + Term 177655 - 177683 1.6 + Prom 177647 - 177706 3.7 153 87 Op 1 . + CDS 177737 - 178456 722 ## COG2949 Uncharacterized membrane protein 154 87 Op 2 . + CDS 178459 - 178698 230 ## G2583_2688 hypothetical protein + Term 178751 - 178793 -0.8 + Prom 178800 - 178859 6.5 155 88 Op 1 4/0.360 + CDS 179017 - 180255 1039 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 156 88 Op 2 . + CDS 180249 - 181484 1110 ## COG0167 Dihydroorotate dehydrogenase - Term 181475 - 181537 8.6 157 89 Op 1 10/0.067 - CDS 181555 - 182565 1373 ## COG4211 ABC-type glucose/galactose transport system, permease component 158 89 Op 2 16/0.000 - CDS 182581 - 184101 193 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 184118 - 184153 6.1 159 89 Op 3 6/0.147 - CDS 184162 - 185160 1395 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 185378 - 185437 5.1 - Term 185399 - 185428 -0.2 160 90 Tu 1 . - CDS 185440 - 186480 988 ## COG1609 Transcriptional regulators - Prom 186523 - 186582 1.9 161 91 Op 1 4/0.360 - CDS 186622 - 187779 1084 ## COG2311 Predicted membrane protein 162 91 Op 2 . - CDS 187796 - 188464 799 ## COG0302 GTP cyclohydrolase I - Prom 188581 - 188640 4.7 + Prom 188419 - 188478 3.0 163 92 Tu 1 . + CDS 188722 - 189558 772 ## COG0627 Predicted esterase + Term 189565 - 189592 1.5 - Term 189551 - 189581 2.1 164 93 Tu 1 . - CDS 189590 - 191581 1966 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 191783 - 191842 7.1 - Term 191821 - 191852 4.1 165 94 Op 1 . - CDS 191874 - 193343 1832 ## COG0833 Amino acid transporters - Prom 193371 - 193430 5.3 166 94 Op 2 . - CDS 193548 - 194429 204 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 - Prom 194449 - 194508 9.1 + Prom 194418 - 194477 9.8 167 95 Op 1 5/0.213 + CDS 194528 - 195577 1188 ## COG2855 Predicted membrane protein 168 95 Op 2 3/0.520 + CDS 195651 - 196508 961 ## COG0648 Endonuclease IV 169 95 Op 3 . + CDS 196512 - 197600 750 ## COG0524 Sugar kinases, ribokinase family 170 96 Op 1 3/0.520 - CDS 197656 - 198906 1356 ## COG1972 Nucleoside permease - Term 198950 - 198990 -0.1 171 96 Op 2 . - CDS 199006 - 199947 1042 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Prom 200013 - 200072 3.5 + Prom 199790 - 199849 6.1 172 97 Tu 1 . + CDS 200077 - 200775 439 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 173 98 Tu 1 4/0.360 - CDS 200846 - 202096 1371 ## COG1972 Nucleoside permease - Term 202111 - 202140 1.9 174 99 Op 1 8/0.067 - CDS 202190 - 203128 993 ## COG2313 Uncharacterized enzyme involved in pigment biosynthesis 175 99 Op 2 4/0.360 - CDS 203116 - 204057 432 ## COG0524 Sugar kinases, ribokinase family - Prom 204154 - 204213 5.3 - Term 204292 - 204327 3.4 176 100 Op 1 19/0.000 - CDS 204514 - 206205 2041 ## COG1299 Phosphotransferase system, fructose-specific IIC component 177 100 Op 2 11/0.040 - CDS 206222 - 207160 991 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 178 100 Op 3 . - CDS 207160 - 208290 1321 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain - Prom 208391 - 208450 3.5 + Prom 208450 - 208509 3.7 179 101 Tu 1 . + CDS 208658 - 209839 967 ## COG0477 Permeases of the major facilitator superfamily 180 102 Tu 1 . - CDS 209836 - 210090 170 ## COG0727 Predicted Fe-S-cluster oxidoreductase - Prom 210256 - 210315 3.4 181 103 Tu 1 . + CDS 210245 - 210817 814 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 210829 - 210877 5.0 + Prom 210950 - 211009 6.0 182 104 Tu 1 . + CDS 211040 - 212506 1243 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases + Term 212517 - 212568 2.2 183 105 Op 1 3/0.520 + CDS 212624 - 213610 691 ## COG0523 Putative GTPases (G3E family) 184 105 Op 2 3/0.520 + CDS 213649 - 214362 446 ## COG0671 Membrane-associated phospholipid phosphatase + Prom 214656 - 214715 5.5 185 106 Tu 1 . + CDS 214774 - 215340 358 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 + Term 215386 - 215423 6.4 + Prom 215431 - 215490 4.1 186 107 Op 1 2/0.720 + CDS 215521 - 217077 1014 ## COG2200 FOG: EAL domain 187 107 Op 2 11/0.040 + CDS 217153 - 218973 1340 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 188 107 Op 3 11/0.040 + CDS 218974 - 220068 1461 ## COG4174 ABC-type uncharacterized transport system, permease component 189 107 Op 4 11/0.040 + CDS 220068 - 221093 985 ## COG4239 ABC-type uncharacterized transport system, permease component 190 107 Op 5 . + CDS 221095 - 222684 333 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Term 222605 - 222652 3.6 191 108 Tu 1 . - CDS 222688 - 223032 238 ## EC55989_2435 hypothetical protein - Prom 223261 - 223320 5.2 - Term 223320 - 223349 0.5 192 109 Op 1 8/0.067 - CDS 223365 - 224555 1222 ## COG0477 Permeases of the major facilitator superfamily 193 109 Op 2 . - CDS 224583 - 225278 761 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 225339 - 225398 4.1 + Prom 224973 - 225032 1.5 194 110 Op 1 . + CDS 225144 - 225401 99 ## gi|466200|sp|P28247|BICB_ECOLI RecName: Full=Putative uncharacterized protein BicB gi|405943|gb|AAA16407.1| bicB/yeiD 195 110 Op 2 5/0.213 + CDS 225427 - 227187 1648 ## COG1061 DNA or RNA helicases of superfamily II 196 110 Op 3 . + CDS 227216 - 227596 633 ## PROTEIN SUPPORTED gi|26108973|gb|AAN81176.1|AE016763_135 50S ribosomal protein L25 + Term 227608 - 227662 6.4 - Term 227597 - 227645 4.6 197 111 Tu 1 . - CDS 227735 - 228742 1179 ## COG3081 Nucleoid-associated protein - Prom 228808 - 228867 6.9 + Prom 228793 - 228852 4.6 198 112 Op 1 8/0.067 + CDS 228924 - 229151 299 ## COG3082 Uncharacterized protein conserved in bacteria 199 112 Op 2 . + CDS 229171 - 230931 1664 ## COG3083 Predicted hydrolase of alkaline phosphatase superfamily + Term 231093 - 231135 6.5 + TRNA 231006 - 231082 78.0 # Pro GGG 0 0 - Term 231136 - 231171 4.2 200 113 Op 1 . - CDS 231186 - 231398 107 ## COG3468 Type V secretory pathway, adhesin AidA 201 113 Op 2 . - CDS 231411 - 233696 1444 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 233943 - 234002 3.2 + Prom 233902 - 233961 3.8 202 114 Tu 1 . + CDS 234097 - 234744 860 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 234750 - 234785 6.1 - Term 234737 - 234773 7.1 203 115 Op 1 5/0.213 - CDS 234779 - 235831 1225 ## COG4235 Cytochrome c biogenesis factor 204 115 Op 2 11/0.040 - CDS 235828 - 236385 664 ## COG0526 Thiol-disulfide isomerase and thioredoxins 205 115 Op 3 16/0.000 - CDS 236382 - 238325 2167 ## COG1138 Cytochrome c biogenesis factor 206 115 Op 4 9/0.067 - CDS 238322 - 238801 622 ## COG2332 Cytochrome c-type biogenesis protein CcmE 207 115 Op 5 9/0.067 - CDS 238798 - 239007 266 ## COG3114 Heme exporter protein D 208 115 Op 6 14/0.013 - CDS 239004 - 239741 767 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 209 115 Op 7 14/0.013 - CDS 239783 - 240442 668 ## COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component 210 115 Op 8 3/0.520 - CDS 240417 - 241064 554 ## COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component 211 115 Op 9 7/0.093 - CDS 241077 - 241679 552 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 212 115 Op 10 4/0.360 - CDS 241689 - 242159 464 ## COG3043 Nitrate reductase cytochrome c-type subunit 213 115 Op 11 7/0.093 - CDS 242135 - 242998 648 ## COG0348 Polyferredoxin 214 115 Op 12 10/0.067 - CDS 242985 - 243680 458 ## COG1145 Ferredoxin 215 115 Op 13 10/0.067 - CDS 243687 - 246173 3226 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 216 115 Op 14 . - CDS 246170 - 246433 323 ## COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase 217 116 Tu 1 . + CDS 247325 - 247813 527 ## COG4574 Serine protease inhibitor ecotin + Term 247884 - 247921 -0.5 218 117 Tu 1 . - CDS 247962 - 249608 1853 ## COG0579 Predicted dehydrogenase - Prom 249699 - 249758 5.9 219 118 Op 1 4/0.360 - CDS 249826 - 251469 195 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 220 118 Op 2 4/0.360 - CDS 251545 - 252192 529 ## COG3145 Alkylated DNA repair protein 221 118 Op 3 3/0.520 - CDS 252195 - 253259 633 ## COG2169 Adenosine deaminase 222 118 Op 4 4/0.360 - CDS 253333 - 254388 1130 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis - Prom 254413 - 254472 2.0 - Term 254444 - 254485 5.0 223 119 Tu 1 . - CDS 254500 - 255591 1387 ## COG3203 Outer membrane protein (porin) - Prom 255706 - 255765 3.6 + Prom 256050 - 256109 5.3 224 120 Op 1 12/0.040 + CDS 256330 - 259002 2566 ## COG0642 Signal transduction histidine kinase 225 120 Op 2 . + CDS 259019 - 259669 817 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 259680 - 259723 11.7 - Term 259791 - 259859 16.8 226 121 Op 1 . - CDS 259869 - 262718 1938 ## COG0642 Signal transduction histidine kinase - Term 262765 - 262813 -1.0 227 121 Op 2 5/0.213 - CDS 262993 - 263769 500 ## COG4676 Uncharacterized protein conserved in bacteria 228 121 Op 3 4/0.360 - CDS 263774 - 265423 1081 ## COG5445 Predicted secreted protein 229 121 Op 4 3/0.520 - CDS 265424 - 270028 3833 ## COG2373 Large extracellular alpha-helical protein 230 121 Op 5 2/0.720 - CDS 269962 - 270585 215 ## COG3234 Uncharacterized protein conserved in bacteria 231 121 Op 6 . - CDS 270582 - 272270 1284 ## COG4685 Uncharacterized protein conserved in bacteria - Prom 272345 - 272404 3.5 - Term 272371 - 272397 -1.0 232 122 Tu 1 . - CDS 272419 - 275046 3251 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 275084 - 275143 6.4 + Prom 275107 - 275166 5.2 233 123 Tu 1 . + CDS 275193 - 275915 818 ## COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase - Term 275908 - 275955 9.4 234 124 Tu 1 . - CDS 275976 - 279470 2882 ## COG3468 Type V secretory pathway, adhesin AidA + Prom 280210 - 280269 2.5 235 125 Op 1 24/0.000 + CDS 280406 - 282691 2847 ## COG0209 Ribonucleotide reductase, alpha subunit + Prom 282698 - 282757 2.2 236 125 Op 2 8/0.067 + CDS 282780 - 283910 1494 ## COG0208 Ribonucleotide reductase, beta subunit 237 125 Op 3 . + CDS 283910 - 284164 211 ## COG0633 Ferredoxin + Term 284260 - 284292 -0.9 238 126 Tu 1 . - CDS 284218 - 284868 541 ## ECIAI1_2315 hypothetical protein - Prom 284896 - 284955 3.8 + Prom 285004 - 285063 4.1 239 127 Tu 1 . + CDS 285083 - 285289 210 ## COG0583 Transcriptional regulator + Term 285491 - 285534 -0.9 240 128 Op 1 6/0.147 - CDS 285331 - 286407 1130 ## COG0584 Glycerophosphoryl diester phosphodiesterase 241 128 Op 2 . - CDS 286412 - 287770 1519 ## COG2271 Sugar phosphate permease - Prom 287890 - 287949 6.4 + Prom 287878 - 287937 4.5 242 129 Op 1 9/0.067 + CDS 288043 - 289671 1775 ## COG0578 Glycerol-3-phosphate dehydrogenase 243 129 Op 2 8/0.067 + CDS 289661 - 290920 977 ## COG3075 Anaerobic glycerol-3-phosphate dehydrogenase 244 129 Op 3 3/0.520 + CDS 290917 - 292107 1059 ## COG0247 Fe-S oxidoreductase + Term 292120 - 292160 10.6 + Prom 292215 - 292274 1.9 245 130 Tu 1 . + CDS 292301 - 293203 678 ## COG5464 Uncharacterized conserved protein - Term 293196 - 293240 4.2 246 131 Tu 1 . - CDS 293244 - 293633 375 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 247 132 Op 1 . - CDS 293769 - 294971 1083 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - Prom 294993 - 295052 4.2 248 132 Op 2 . - CDS 295071 - 295613 666 ## B21_02135 hypothetical protein + Prom 295690 - 295749 6.4 249 133 Tu 1 . + CDS 295892 - 296317 417 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 296321 - 296364 1.6 - Term 296310 - 296345 5.1 250 134 Tu 1 . - CDS 296356 - 296958 188 ## SFV_2322 protein induced by aluminum - Prom 297106 - 297165 5.8 + Prom 297151 - 297210 7.4 251 135 Op 1 5/0.213 + CDS 297248 - 298405 889 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 252 135 Op 2 12/0.040 + CDS 298409 - 299377 832 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 253 135 Op 3 8/0.067 + CDS 299377 - 301359 1561 ## COG0451 Nucleoside-diphosphate-sugar epimerases 254 135 Op 4 6/0.147 + CDS 301356 - 302246 785 ## COG0726 Predicted xylanase/chitin deacetylase 255 135 Op 5 5/0.213 + CDS 302246 - 303898 1355 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 256 135 Op 6 9/0.067 + CDS 303895 - 304230 347 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 257 135 Op 7 9/0.067 + CDS 304230 - 304448 262 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 258 135 Op 8 . + CDS 304328 - 304615 159 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 304429 - 304472 2.9 259 136 Tu 1 . - CDS 304609 - 304875 184 ## ECUMN_2602 polymyxin resistance protein B - Prom 304909 - 304968 4.9 260 137 Op 1 6/0.147 - CDS 304985 - 306340 1185 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 261 137 Op 2 5/0.213 - CDS 306337 - 307299 983 ## COG1441 O-succinylbenzoate synthase 262 137 Op 3 9/0.067 - CDS 307299 - 308156 937 ## COG0447 Dihydroxynaphthoic acid synthase 263 137 Op 4 15/0.000 - CDS 308171 - 308929 542 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 264 137 Op 5 10/0.067 - CDS 308926 - 310380 1364 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase - Prom 310477 - 310536 46.4 - SSU_RRNA 310489 - 310842 99.0 # AY958844 [D:1..1893] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. 265 138 Op 1 1/0.893 - CDS 310838 - 311980 832 ## COG1169 Isochorismate synthase 266 138 Op 2 4/0.360 - CDS 312059 - 312364 490 ## COG4575 Uncharacterized conserved protein 267 138 Op 3 . - CDS 312419 - 312880 503 ## COG2153 Predicted acyltransferase - Prom 312901 - 312960 4.9 + Prom 312860 - 312919 5.0 268 139 Tu 1 . + CDS 312945 - 313862 556 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III + Term 313884 - 313910 -0.6 + Prom 313934 - 313993 4.0 269 140 Op 1 . + CDS 314053 - 314808 346 ## ECO26_3260 deubiquitinase 270 140 Op 2 . + CDS 314898 - 315269 202 ## ECO26_3260 deubiquitinase + Term 315286 - 315334 9.2 + Prom 316305 - 316364 5.4 271 141 Tu 1 . + CDS 316390 - 316893 582 ## SDY_2471 hypothetical protein + Term 316917 - 316949 3.0 - Term 316901 - 316940 4.1 272 142 Op 1 22/0.000 - CDS 316960 - 318417 1919 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) 273 142 Op 2 30/0.000 - CDS 318424 - 319953 1700 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) - Prom 319986 - 320045 1.9 274 142 Op 3 26/0.000 - CDS 320117 - 321958 2185 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 275 142 Op 4 30/0.000 - CDS 321955 - 322257 471 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 276 142 Op 5 28/0.000 - CDS 322254 - 322808 746 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 277 142 Op 6 31/0.000 - CDS 322820 - 323362 687 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 278 142 Op 7 18/0.000 - CDS 323377 - 324354 1192 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 279 142 Op 8 12/0.040 - CDS 324351 - 327077 3024 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 280 142 Op 9 23/0.000 - CDS 327130 - 328467 1436 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 281 142 Op 10 15/0.000 - CDS 328464 - 328964 492 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 282 142 Op 11 9/0.067 - CDS 328967 - 330757 2125 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 283 143 Op 1 30/0.000 - CDS 330863 - 331525 651 ## COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 284 143 Op 2 . - CDS 331541 - 331978 452 ## COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) - Prom 332074 - 332133 5.9 + Prom 332085 - 332144 3.9 285 144 Tu 1 . + CDS 332247 - 332411 61 ## ECBD_1372 hypothetical protein + Term 332540 - 332583 8.0 - Term 332526 - 332571 9.3 286 145 Tu 1 . - CDS 332615 - 333553 921 ## COG0583 Transcriptional regulator + Prom 334362 - 334421 1.9 287 146 Op 1 6/0.147 + CDS 334473 - 335690 1046 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 288 146 Op 2 . + CDS 335774 - 336373 713 ## COG1896 Predicted hydrolases of HD superfamily - Term 336167 - 336202 -0.5 289 147 Tu 1 2/0.720 - CDS 336432 - 338264 1494 ## COG0471 Di- and tricarboxylate transporters - Prom 338290 - 338349 2.5 - Term 338302 - 338331 1.1 290 148 Op 1 . - CDS 338351 - 339001 441 ## COG0637 Predicted phosphatase/phosphohexomutase 291 148 Op 2 2/0.720 - CDS 339012 - 339506 642 ## COG3013 Uncharacterized conserved protein - Term 339533 - 339563 -0.5 292 148 Op 3 . - CDS 339589 - 340044 366 ## COG3092 Uncharacterized protein conserved in bacteria - Prom 340202 - 340261 4.8 + Prom 340101 - 340160 3.0 293 149 Op 1 14/0.013 + CDS 340382 - 341584 1366 ## COG0282 Acetate kinase + Term 341588 - 341627 10.1 294 149 Op 2 1/0.893 + CDS 341659 - 343803 2377 ## COG0857 BioD-like N-terminal domain of phosphotransacetylase + Term 343841 - 343881 6.8 + Prom 343833 - 343892 4.1 295 150 Tu 1 . + CDS 344035 - 345513 1449 ## COG1288 Predicted membrane protein + Term 345523 - 345553 3.0 - Term 345513 - 345538 -0.5 296 151 Tu 1 3/0.520 - CDS 345546 - 346088 611 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 297 152 Op 1 2/0.720 - CDS 346146 - 346697 516 ## COG0622 Predicted phosphoesterase 298 152 Op 2 . - CDS 346753 - 347397 558 ## COG0625 Glutathione S-transferase - Prom 347425 - 347484 2.1 + Prom 347445 - 347504 3.9 299 153 Op 1 3/0.520 + CDS 347533 - 348180 537 ## COG0625 Glutathione S-transferase 300 153 Op 2 3/0.520 + CDS 348237 - 348599 396 ## COG1539 Dihydroneopterin aldolase 301 153 Op 3 . + CDS 348620 - 349513 857 ## COG1090 Predicted nucleoside-diphosphate sugar epimerase - Term 349478 - 349539 1.8 302 154 Tu 1 . - CDS 349561 - 350181 465 ## COG5464 Uncharacterized conserved protein - Prom 350214 - 350273 5.0 - Term 350604 - 350641 6.0 303 155 Op 1 6/0.147 - CDS 350648 - 351421 256 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 304 155 Op 2 12/0.040 - CDS 351429 - 352145 612 ## COG4160 ABC-type arginine/histidine transport system, permease component 305 155 Op 3 12/0.040 - CDS 352142 - 352828 699 ## COG4215 ABC-type arginine transport system, permease component 306 155 Op 4 9/0.067 - CDS 352918 - 353700 1010 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 353811 - 353870 4.3 - Term 353760 - 353803 0.2 307 156 Tu 1 5/0.213 - CDS 353921 - 354703 947 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 354903 - 354962 2.4 - Term 354930 - 354960 3.6 308 157 Op 1 5/0.213 - CDS 354969 - 355538 544 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase 309 157 Op 2 18/0.000 - CDS 355633 - 357150 1567 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 310 157 Op 3 7/0.093 - CDS 357187 - 357675 387 ## COG1286 Uncharacterized membrane protein, required for colicin V production - Prom 357711 - 357770 4.8 - Term 357764 - 357805 6.4 311 158 Op 1 7/0.093 - CDS 357934 - 358596 680 ## COG3147 Uncharacterized protein conserved in bacteria 312 158 Op 2 15/0.000 - CDS 358586 - 359854 1222 ## COG0285 Folylpolyglutamate synthase - Term 359874 - 359919 10.6 313 158 Op 3 5/0.213 - CDS 359924 - 360838 1026 ## COG0777 Acetyl-CoA carboxylase beta subunit - Prom 360932 - 360991 4.7 314 159 Op 1 5/0.213 - CDS 360994 - 361653 561 ## COG0586 Uncharacterized membrane-associated protein 315 159 Op 2 5/0.213 - CDS 361736 - 362548 582 ## COG0101 Pseudouridylate synthase 316 159 Op 3 5/0.213 - CDS 362548 - 363561 1265 ## COG0136 Aspartate-semialdehyde dehydrogenase - Term 363574 - 363614 5.1 317 159 Op 4 . - CDS 363627 - 364763 1004 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Prom 364780 - 364839 3.4 318 160 Tu 1 . + CDS 364862 - 365857 799 ## EC55989_2565 flagella biosynthesis regulator - Term 365776 - 365806 1.8 319 161 Tu 1 . - CDS 365854 - 367032 1046 ## COG0477 Permeases of the major facilitator superfamily - Prom 367151 - 367210 4.5 - Term 367188 - 367217 2.1 320 162 Tu 1 . - CDS 367297 - 368517 1338 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 368553 - 368612 3.5 + Prom 368592 - 368651 3.7 321 163 Tu 1 . + CDS 368676 - 370682 1512 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 370929 - 370970 1.9 322 164 Op 1 . - CDS 370803 - 371081 369 ## ECB_02250 hypothetical protein 323 164 Op 2 5/0.213 - CDS 371115 - 371663 508 ## COG3101 Uncharacterized protein conserved in bacteria 324 164 Op 3 7/0.093 - CDS 371663 - 372472 849 ## COG0730 Predicted permeases 325 164 Op 4 7/0.093 - CDS 372472 - 373296 562 ## COG3770 Murein endopeptidase 326 164 Op 5 3/0.520 - CDS 373300 - 374385 1106 ## COG0082 Chorismate synthase 327 164 Op 6 . - CDS 374420 - 375352 1632 ## PROTEIN SUPPORTED gi|191165479|ref|ZP_03027320.1| ribosomal large subunit L3 protein glutamine methyltransferase - Prom 375490 - 375549 2.7 + Prom 375320 - 375379 3.4 328 165 Tu 1 . + CDS 375518 - 376069 565 ## COG2840 Uncharacterized protein conserved in bacteria 329 166 Tu 1 . - CDS 376142 - 376741 223 ## ECO111_3080 hypothetical protein 330 167 Op 1 4/0.360 - CDS 376995 - 377534 463 ## COG3539 P pilus assembly protein, pilin FimA 331 167 Op 2 4/0.360 - CDS 377531 - 378019 402 ## COG3539 P pilus assembly protein, pilin FimA 332 167 Op 3 7/0.093 - CDS 378016 - 378525 265 ## COG3539 P pilus assembly protein, pilin FimA 333 167 Op 4 10/0.067 - CDS 378541 - 379293 641 ## COG3121 P pilus assembly protein, chaperone PapD 334 167 Op 5 . - CDS 379313 - 380839 1479 ## COG3188 P pilus assembly protein, porin PapC Predicted protein(s) >gi|299857063|gb|ADWS01000001.1| GENE 1 352 - 990 704 212 aa, chain - ## HITS:1 COG:msrA KEGG:ns NR:ns ## COG: msrA COG0225 # Protein_GI_number: 16132041 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Escherichia coli K12 # 1 212 1 212 212 405 100.0 1e-113 MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNVPDGMEIAIFAMGCFWGVERLF WQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHD PAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPF YYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA >gi|299857063|gb|ADWS01000001.1| GENE 2 1196 - 2929 1571 577 aa, chain + ## HITS:1 COG:ECs5198 KEGG:ns NR:ns ## COG: ECs5198 COG0729 # Protein_GI_number: 15834452 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 1 577 1 577 577 1169 99.0 0 MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLSTIESDEVTPDRRFRAR VDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGVPVLIGGTDVVLRGGARTD KDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFDSEFTKAQLGIALGLHKAFWD IDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEYESKDLAELNRRLSATGWFNSVV VAPQFDKARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSLTT STSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLVASRYWDLSSG WQRAINLRWSLDHFTQGEITNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSIDYSNTAW GSDVDFSVFQAQNVWIRTLYDRHRFVTRSTLGWIETGDFDKVPPDLRFFAGGDRSIRGYK YKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGV GVRWESPVGPIKLDFAVPVADKDEHGLQFYIGLGPEL >gi|299857063|gb|ADWS01000001.1| GENE 3 2926 - 6705 4200 1259 aa, chain + ## HITS:1 COG:ytfN KEGG:ns NR:ns ## COG: ytfN COG2911 # Protein_GI_number: 16132043 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 1259 1 1259 1259 2435 99.0 0 MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVPGLDIGKVTGGWRDLTL SDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQVNIDSKKMPPSEQVEEEE DSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSGLNWQEKTLTLKPTSLKGLLI ALPKVAEVAQEEVVEPKIENPQPEEKPLGETLKDLFSRPVLPEMTDLHLPLNLNIEEFKG EQLRVTGDTDITVRTMLLKVSSIDGNTKLDALDIDSNQGIVNASGTAQLSDNWPVDITLN STLNVEPLKGEKVKLKVGGALREQLEIGVNLSGPVDMDLRAQTRLAEAGLPLNVEVNSKQ LYWPFTGEKQYQADDLKLKLTGKMTDYTLSMRTAVKGQEIPPATITLDAKGNEQQVNLDK LTVAALEGKTELKALLDWQQAISWRGELTLNGINTAKEFPEWPSKLNGLIKTRGSLYGGT WQMEVPELKLTGNVKQNKVNVDGTLKGNSYMQWMIPGLHLELGPNSAEVKGELGVKDLNL DATINAPGLDNALPGLGGTAKGLVKVRGTVEAPQLLADITARGLRWQELSVAQVRVEGDI KSTDQIAGKLDVRVEQISQPDVNINLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFD RKEERWKGTLSNTRFQTPVGPWSLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTID AGAEGRAVVNLNRFDLAMLKPFMPETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNV QVTQTVNDAALPVAFQTLNLTAELRNNRAELGWTIRLTNNGQFDGQVQVTDPQGRRNLGG NVNIRNFNLAMINPIFTRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFD MQPSQLAVNFNGMRSTLAGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPM VRMDVSPDVVFEATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPK TASIPINSNLIVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQ DLIVRKGELLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQ QAALSYLLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGD SSQVVVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF >gi|299857063|gb|ADWS01000001.1| GENE 4 6708 - 7049 197 113 aa, chain + ## HITS:1 COG:ECs5200 KEGG:ns NR:ns ## COG: ECs5200 COG2105 # Protein_GI_number: 15834454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 113 1 113 113 226 100.0 1e-59 MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGAVPGNGTVHGEVYRIDN ATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVDGLKLIESGDWLDRDK >gi|299857063|gb|ADWS01000001.1| GENE 5 7262 - 7513 294 83 aa, chain + ## HITS:1 COG:chpS KEGG:ns NR:ns ## COG: chpS COG2336 # Protein_GI_number: 16132046 # Func_class: T Signal transduction mechanisms # Function: Growth regulator # Organism: Escherichia coli K12 # 1 83 3 85 85 154 100.0 3e-38 MRITIKRWGNSAGMVIPNIVMKELNLQPGQSVEAQVSNNQLILTPISRRYSLDELLAQCD MNAAELSEQDVWGKSTPAGDEIW >gi|299857063|gb|ADWS01000001.1| GENE 6 7507 - 7857 333 116 aa, chain + ## HITS:1 COG:ECs5203 KEGG:ns NR:ns ## COG: ECs5203 COG2337 # Protein_GI_number: 15834457 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Escherichia coli O157:H7 # 1 116 1 116 116 213 100.0 5e-56 MVKKSEFERGDIVLVGFDPASGHEQQGAGRPALVLSVQAFNQLGMTLVAPITQGGNFARY AGFSVPLHCEEGDVHGVVLVNQVRMMDLRARLAKRIGLAADEVVEEALLRLQAVVE >gi|299857063|gb|ADWS01000001.1| GENE 7 7937 - 8467 747 176 aa, chain - ## HITS:1 COG:ECs5204 KEGG:ns NR:ns ## COG: ECs5204 COG0221 # Protein_GI_number: 15834458 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 346 98.0 1e-95 MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYIN HTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLIAVPHTKLSKEYDH IKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFERAKNK >gi|299857063|gb|ADWS01000001.1| GENE 8 8777 - 9733 1106 318 aa, chain + ## HITS:1 COG:ECs5205 KEGG:ns NR:ns ## COG: ECs5205 COG1879 # Protein_GI_number: 15834459 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 571 99.0 1e-163 MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIAD GQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKS LYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPN IKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGK DILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTL YLPDTAKEELEKKKNMGY >gi|299857063|gb|ADWS01000001.1| GENE 9 10043 - 11545 207 500 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 268 477 9 214 245 84 26 6e-15 MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYH ADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGFLRRK EMEKRATELMTSYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQE VELLFGLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETRELPQIELVKM MLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRT ETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENII LALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTR PQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQ VAEIPLAELSVPAIMNAIAA >gi|299857063|gb|ADWS01000001.1| GENE 10 11559 - 12581 1105 340 aa, chain + ## HITS:1 COG:ECs5207 KEGG:ns NR:ns ## COG: ECs5207 COG1172 # Protein_GI_number: 15834461 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 340 2 341 341 491 98.0 1e-139 MPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILN RAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILA GLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIVTFNSPDLSWFGSGSLLFLPTP VIIAVMTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILL SGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSHDKT >gi|299857063|gb|ADWS01000001.1| GENE 11 12568 - 13563 1153 331 aa, chain + ## HITS:1 COG:yjfF KEGG:ns NR:ns ## COG: yjfF COG1172 # Protein_GI_number: 16132053 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 9 331 1 323 323 519 99.0 1e-147 MIKRNLPLMITIGVFVLGYFYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGG IDLSVGSVIAFTGVFLAKVVGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT LAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLMLAVVVIGIFLA HRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAG VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGIL LFIFIALQRGLTVLWENRQSSPVTRVNIAQR >gi|299857063|gb|ADWS01000001.1| GENE 12 13596 - 14594 1119 332 aa, chain - ## HITS:1 COG:fbp KEGG:ns NR:ns ## COG: fbp COG0158 # Protein_GI_number: 16132054 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Escherichia coli K12 # 1 332 1 332 332 685 100.0 0 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGE VQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDV NVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTY DPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYI GSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDI IPETLHQRRSFFVGNDHMVEDVERFIREFPDA >gi|299857063|gb|ADWS01000001.1| GENE 13 14770 - 16143 1591 457 aa, chain + ## HITS:1 COG:ZyjfG KEGG:ns NR:ns ## COG: ZyjfG COG0773 # Protein_GI_number: 15804823 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Escherichia coli O157:H7 EDL933 # 1 457 1 457 457 953 100.0 0 MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLDP QPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTTAGM ATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEADEYDCAFFDKRSKFVHYCPRT LILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTMAMGCWSEQEL VGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLVGEHNMHNGLMAIAAARHVGVAPAD AANALGSFINARRRLELRGEANGVTVYDDFAHHPTAILATLAALRGKVGGTARIIAVLEP RSNTMKMGICKDDLAPSLGRADEVFLLQPAHIPWQVAEVAEACVQPAHWSGDVDTLADMV VKTAQPGDHILVMSNGGFGGIHQKLLDGLAKKAEAAQ >gi|299857063|gb|ADWS01000001.1| GENE 14 16299 - 16850 776 183 aa, chain - ## HITS:1 COG:ECs5211 KEGG:ns NR:ns ## COG: ECs5211 COG3028 # Protein_GI_number: 15834465 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 271 100.0 7e-73 MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLD ADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLEN LRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKEGNKPPKSARQIFQYLRELAE NEG >gi|299857063|gb|ADWS01000001.1| GENE 15 16944 - 18296 1456 450 aa, chain + ## HITS:1 COG:ECs5212 KEGG:ns NR:ns ## COG: ECs5212 COG0312 # Protein_GI_number: 15834466 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 885 100.0 0 MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEF NSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFD APDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQ GYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLS TMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKG LASTPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGLSF EQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWR NIVTVGNDIETRSNIQCGSVLLPEMKIAGQ >gi|299857063|gb|ADWS01000001.1| GENE 16 18351 - 18737 542 128 aa, chain + ## HITS:1 COG:STM4439 KEGG:ns NR:ns ## COG: STM4439 COG3783 # Protein_GI_number: 16767685 # Func_class: C Energy production and conversion # Function: Soluble cytochrome b562 # Organism: Salmonella typhimurium LT2 # 1 128 1 128 128 175 85.0 2e-44 MRKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADNAAQVKDALTKMRAAAL DAQKATPPKLEGKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTR NAYHQKYR >gi|299857063|gb|ADWS01000001.1| GENE 17 18782 - 19246 417 154 aa, chain - ## HITS:1 COG:ECs5214 KEGG:ns NR:ns ## COG: ECs5214 COG0602 # Protein_GI_number: 15834468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 325 100.0 1e-89 MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLN DTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNAAQMQVV DLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR >gi|299857063|gb|ADWS01000001.1| GENE 18 19405 - 21543 2524 712 aa, chain - ## HITS:1 COG:nrdD KEGG:ns NR:ns ## COG: nrdD COG1328 # Protein_GI_number: 16132060 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Escherichia coli K12 # 1 712 1 712 712 1505 99.0 0 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANK DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDL KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY NKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIF KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDKWKEETGYGFS LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF TCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG >gi|299857063|gb|ADWS01000001.1| GENE 19 21937 - 23592 1302 551 aa, chain - ## HITS:1 COG:ECs5216 KEGG:ns NR:ns ## COG: ECs5216 COG0366 # Protein_GI_number: 15834470 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 551 1 551 551 1130 98.0 0 MTNLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQRLDYLHKLGVDAIWLTPFYVSPQ VDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMVFNHTSTQHAWFREALNKE SPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRA ELKKVCEFWADRGVDGLRLDVVNLISKDPRFPEDLDGDGRRFYTDGPRAHEFLHEMNRDV FTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFNFHHLKVDYPGGEKWTLAKPDFVAL KTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMVLHGMQGTPYI YQGEEIGMTNPHFTRITDYRDVESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWS NGDNAGFTAGEPWIGLGDNYQQINVEAALTDESSVFYTYQKLIALRKQEAVLTWGNYQDL LPNSPVLWCYRREWKGQTLLVIANLSRGIQPWQPGQMRGNWQLVMHNYEEASPQPCAMNL RPFEAVWWLQK >gi|299857063|gb|ADWS01000001.1| GENE 20 23642 - 25060 1519 472 aa, chain - ## HITS:1 COG:ECs5217_2 KEGG:ns NR:ns ## COG: ECs5217_2 COG1263 # Protein_GI_number: 15834471 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 92 472 1 381 381 686 99.0 0 MSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNA GQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARQNMKWHEQLISHFAEIFFPLLPA LISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVK KMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDFGMFSIAKVGYQAQVIPALLAGLA LGVIETRLKRIVPDYLYLVVVPVCSLILTVFLAHALIGPFGRMIGDGVAFAVRHLMTGSF APIGAALFGFLYAPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQGSAVIGIII SSRKHNEREISVPAAISAWLGVTEPAMYGINLKYHFPMLCAMIGSGLAGLLCGLNGVMAN GIGVGGLPGILSIQPSYWQVFALAMAIAIIIPIVLTSFIYQRKYRLGTLDIV >gi|299857063|gb|ADWS01000001.1| GENE 21 25182 - 26129 837 315 aa, chain - ## HITS:1 COG:treR KEGG:ns NR:ns ## COG: treR COG1609 # Protein_GI_number: 16132063 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 315 1 315 315 616 99.0 1e-176 MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYGQGHRNISY LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT GRSEPQQIIIPATLS >gi|299857063|gb|ADWS01000001.1| GENE 22 26508 - 29204 2724 898 aa, chain + ## HITS:1 COG:ECs5219 KEGG:ns NR:ns ## COG: ECs5219 COG0474 # Protein_GI_number: 15834473 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli O157:H7 # 1 898 1 898 898 1815 99.0 0 MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTAVPPSLSAHCLKMAVMPEEELWKTFDTH PEGLNQAEVESAREQHGENKLPAQQPSPWWVHLWVCYRNPFNILLTILGAISYATEDLFA AGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLV PGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKAATTRQPEHSNPLECDTLC FMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQESEPNAFQQGISRVSMLLIRFMLVMA PVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDA IQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTA VLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQ VRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGY IAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLS DDELANLAQRTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDG AVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL PFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFD ILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIM TVIVMIVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ >gi|299857063|gb|ADWS01000001.1| GENE 23 29410 - 29796 567 128 aa, chain - ## HITS:1 COG:ECs5220 KEGG:ns NR:ns ## COG: ECs5220 COG0251 # Protein_GI_number: 15834474 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli O157:H7 # 1 128 14 141 141 228 100.0 2e-60 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAI VEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIE IEAIAVRR >gi|299857063|gb|ADWS01000001.1| GENE 24 29869 - 30330 536 153 aa, chain - ## HITS:1 COG:ECs5221 KEGG:ns NR:ns ## COG: ECs5221 COG1781 # Protein_GI_number: 15834475 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 304 100.0 5e-83 MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIK IENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN >gi|299857063|gb|ADWS01000001.1| GENE 25 30343 - 31278 1091 311 aa, chain - ## HITS:1 COG:ECs5222 KEGG:ns NR:ns ## COG: ECs5222 COG0540 # Protein_GI_number: 15834476 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 613 100.0 1e-176 MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSF ETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFS GNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKF DGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSE YANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQAL LALVLNRDLVL >gi|299857063|gb|ADWS01000001.1| GENE 26 31697 - 32092 263 131 aa, chain - ## HITS:1 COG:yjgH KEGG:ns NR:ns ## COG: yjgH COG0251 # Protein_GI_number: 16132070 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 131 1 131 131 264 99.0 3e-71 MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNL HAILAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDF EIKVIARIPEQ >gi|299857063|gb|ADWS01000001.1| GENE 27 32223 - 32897 227 224 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 221 4 239 242 92 32 3e-17 MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDS ADRDAVIDVVRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQ MPEGGRILIIGSVNGDRMPVAGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDM LHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA >gi|299857063|gb|ADWS01000001.1| GENE 28 32968 - 33561 336 197 aa, chain + ## HITS:1 COG:STM1674 KEGG:ns NR:ns ## COG: STM1674 COG1309 # Protein_GI_number: 16765017 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 2 197 1 196 196 215 55.0 4e-56 MVTKKQSRVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSK AGLFSRVLNEYVGTEAIPLVDILRDDRPVGECLAEVLKEAARRYSQNGGCAGCMVLEGIH SHDPQARDIAVQYYHAAETAIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSLEQL CATAALAGGAIKTILKE >gi|299857063|gb|ADWS01000001.1| GENE 29 33706 - 34158 557 150 aa, chain + ## HITS:1 COG:ECs5229 KEGG:ns NR:ns ## COG: ECs5229 COG2731 # Protein_GI_number: 15834483 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli O157:H7 # 1 150 4 153 153 302 98.0 2e-82 MIIGNIHNLQSWLPQELRQAIEHIKANVTAETPKGKHDIEGNRLFYLISEDMTEPYEARR AEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFV VFYPGEVHKPLCAVGAPAQVRKAVVKMLMA >gi|299857063|gb|ADWS01000001.1| GENE 30 34281 - 34859 127 192 aa, chain + ## HITS:1 COG:no KEGG:ECO26_5422 NR:ns ## KEGG: ECO26_5422 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 192 1 189 503 224 60.0 2e-57 MSKISHSDYFHYVASCRNFKPKHDVLNSWCVGINNFSRIAEGQHNKRNILSPKAFLEFLA WIFTLGHVDFSESRNEAGRKMMGNIKSSSYLKKDDGSEIMRFYMNNPEGWEDDIRPVILE VRLTPPSVNGARQGRTAIIFDDVTESGKSIFRFEGTDFETKDESSLLLITNKVLACYQRE INNEIALQLNNN >gi|299857063|gb|ADWS01000001.1| GENE 31 34860 - 35879 443 339 aa, chain + ## HITS:1 COG:no KEGG:B21_04083 NR:ns ## KEGG: B21_04083 # Name: yjgL # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 10 334 215 550 550 452 72.0 1e-125 MNWQAQDYKDFFKDALATTLSTIKQEHLLIMPHVCNEIIPDLLGEEGILEEIDNLSASDD AFTNNKKSNDEINKIKIDLAHILIDSLDDAPVDLSPVIRSMLETFLKSPYMSDVKILEWC FNKSIEYFNAAAKIDYACDVIKNIKSGCDQSKRAEALFSLLDKEPYKNSCKLQGLIWDKL VAYVNDFNLSNQEKSRLILKLFDDVKLLFNEVPVSILVNDIFLKGFFMKQPDFAKWYFYQ LLKCYEGEQLYLNELGYVYGDEEKTKEIVNKLPGYVVKIFEEKMVNELKIRTRMMEVLRD GKINIYNYINEKQLEKLNPPENLRAVIEKWGWKNRTHTA >gi|299857063|gb|ADWS01000001.1| GENE 32 35937 - 36941 1000 334 aa, chain - ## HITS:1 COG:ECs5231 KEGG:ns NR:ns ## COG: ECs5231 COG0078 # Protein_GI_number: 15834485 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 673 99.0 0 MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTR CSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEY AGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALT GLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEA KEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGME VTDEVFESAASIVFDQAENRMHTIKAVMVATLSK >gi|299857063|gb|ADWS01000001.1| GENE 33 37103 - 37519 737 138 aa, chain + ## HITS:1 COG:ECs5232 KEGG:ns NR:ns ## COG: ECs5232 COG3076 # Protein_GI_number: 15834486 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 186 96.0 9e-48 MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEV TDPEELEVEDGDVVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNG EDGDDEEYIDDDDDGVRH >gi|299857063|gb|ADWS01000001.1| GENE 34 37566 - 38069 493 167 aa, chain - ## HITS:1 COG:STM4473 KEGG:ns NR:ns ## COG: STM4473 COG0454 # Protein_GI_number: 16767718 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 167 1 167 167 266 81.0 1e-71 MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGH AYWVVEYDGEVVGGGGIAPLTGSEADICELQKMYFLPAIRGKGLAKKLALMAMDHAHEMG FKRCYLETTAFLTEAIALYEHLGFQHIDYALGCTGHVDCEVRMLRDL >gi|299857063|gb|ADWS01000001.1| GENE 35 38262 - 39458 409 398 aa, chain + ## HITS:1 COG:ECs5234 KEGG:ns NR:ns ## COG: ECs5234 COG4269 # Protein_GI_number: 15834488 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 398 1 398 398 650 97.0 0 MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEV NGQRFSYGITGGNVFVSCLVFVFFYFAILMTVSADMPLVGCVLTLLLLVLLIFMAAKGLR HQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAVGMGTVFFISTKMLHANSSSSVIISM VLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPF LAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVS LRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKN TYLLGDLDDLPLINKEEQPDKGFLASISRGVMPSLPFL >gi|299857063|gb|ADWS01000001.1| GENE 36 39512 - 42367 3505 951 aa, chain - ## HITS:1 COG:valS KEGG:ns NR:ns ## COG: valS COG0525 # Protein_GI_number: 16132080 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 951 1 951 951 1933 99.0 0 MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMD TMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAE SGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR TAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDP RYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINI LTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPH DLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVKSGDIQFVPKQYENMYFSWMRDI QDWCISRQLWWGHRIPAWYDDAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSA LWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHT VYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEK QFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQD CGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELT KPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQP FPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNEN RGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIE GEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL >gi|299857063|gb|ADWS01000001.1| GENE 37 42367 - 42810 454 147 aa, chain - ## HITS:1 COG:ECs5236 KEGG:ns NR:ns ## COG: ECs5236 COG2927 # Protein_GI_number: 15834490 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, chi subunit # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 289 99.0 1e-78 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP AESFVPHNLAGEGPRGGAPVEIAWPQKRSSNPRDILISLRTSFADFATAFTEVVDFVPYE DSLKQLARERYKAYRVAGFNLNTATWK >gi|299857063|gb|ADWS01000001.1| GENE 38 43071 - 44582 1690 503 aa, chain - ## HITS:1 COG:ECs5237 KEGG:ns NR:ns ## COG: ECs5237 COG0260 # Protein_GI_number: 15834491 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Escherichia coli O157:H7 # 1 503 1 503 503 1002 100.0 0 MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTL LLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGR NNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAI AAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVG QGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAV YGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLC DVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRL PLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKG ATGRPVALLAQFLLNRAGFNGEE >gi|299857063|gb|ADWS01000001.1| GENE 39 44870 - 45949 916 359 aa, chain + ## HITS:1 COG:ECs5238 KEGG:ns NR:ns ## COG: ECs5238 COG0795 # Protein_GI_number: 15834492 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 359 8 366 366 621 99.0 1e-178 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRH QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSV VVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTD QMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYL LFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV >gi|299857063|gb|ADWS01000001.1| GENE 40 45949 - 47031 1433 360 aa, chain + ## HITS:1 COG:ECs5239 KEGG:ns NR:ns ## COG: ECs5239 COG0795 # Protein_GI_number: 15834493 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 360 2 361 361 659 100.0 0 MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSV PKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAI GEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAF NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG VVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL RSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS >gi|299857063|gb|ADWS01000001.1| GENE 41 47192 - 48694 1435 500 aa, chain - ## HITS:1 COG:yjgR KEGG:ns NR:ns ## COG: yjgR COG0433 # Protein_GI_number: 16132085 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli K12 # 1 500 1 500 500 944 98.0 0 MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK GDLTGVAEEGTSSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLL ARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV GAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRSDTNGKGVINILSAEKLYQMPKLYAASLL WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGE ALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEM LQKGFQASTEQQNNPAVKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAAR QVTNQIVRGVLGSLLGGRRR >gi|299857063|gb|ADWS01000001.1| GENE 42 48772 - 49770 778 332 aa, chain - ## HITS:1 COG:idnR KEGG:ns NR:ns ## COG: idnR COG1609 # Protein_GI_number: 16132086 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 332 1 332 332 653 99.0 0 MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLN AQSYTLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNI DGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLDKRV RRKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSATPD LDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGR MAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL >gi|299857063|gb|ADWS01000001.1| GENE 43 49837 - 51156 1267 439 aa, chain - ## HITS:1 COG:idnT KEGG:ns NR:ns ## COG: idnT COG2610 # Protein_GI_number: 16132087 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 439 1 439 439 697 99.0 0 MPLIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGG LAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVL LLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLLPHPGPTAIATIFEANLGTTLLYGFI ITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAA VCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIA MIVFIIAGGGAFKQVLVDSGVGQYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAIT TAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVME TLISIMGLLGVLAINAVLH >gi|299857063|gb|ADWS01000001.1| GENE 44 51221 - 51985 863 254 aa, chain - ## HITS:1 COG:idnO KEGG:ns NR:ns ## COG: idnO COG1028 # Protein_GI_number: 16132088 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 254 1 254 254 505 98.0 1e-143 MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLRQEGIRA VAAPFNVTHKHEIDTAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTA VFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHN IQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVN GHLLFVDGGMLVAV >gi|299857063|gb|ADWS01000001.1| GENE 45 52009 - 53040 839 343 aa, chain - ## HITS:1 COG:idnD KEGG:ns NR:ns ## COG: idnD COG1063 # Protein_GI_number: 16132089 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 343 1 343 343 704 98.0 0 MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAP MVLGHEVIGKVIHSDSSELHEGQTVAINPSKPCGHCKYCIEHNENQCTEMRFFGSAMYFP HVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGP IGCLIVSAVKTLGASEIVCADVSPRSLLLAKEMGADVLVNPQNDDMDHWKAEKGYFDVSF EVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLKGSFRFTSEFNTAV SWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF >gi|299857063|gb|ADWS01000001.1| GENE 46 53257 - 53820 405 187 aa, chain + ## HITS:1 COG:idnK KEGG:ns NR:ns ## COG: idnK COG3265 # Protein_GI_number: 16132090 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Escherichia coli K12 # 1 187 1 187 187 380 100.0 1e-106 MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPW LERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRA GHFMPVALLKSQFEALERPQADEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGS ASDQRCE >gi|299857063|gb|ADWS01000001.1| GENE 47 53824 - 54843 1133 339 aa, chain - ## HITS:1 COG:yjgB KEGG:ns NR:ns ## COG: yjgB COG1064 # Protein_GI_number: 16132091 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli K12 # 1 339 15 353 353 671 98.0 0 MSMIKSYAAKEAGGKLEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLV AGHEVIGCVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMN RGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGL GHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVN VSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPHELRKLMRFA ARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF >gi|299857063|gb|ADWS01000001.1| GENE 48 55310 - 56575 388 421 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 49 400 60 401 406 154 29 6e-36 MALTDIKVRAAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT LADARVRRDEARNLLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRV LKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL IDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSS ELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF YGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRD AVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAKINNPLK Q >gi|299857063|gb|ADWS01000001.1| GENE 49 56976 - 57935 551 319 aa, chain - ## HITS:1 COG:yjgX KEGG:ns NR:ns ## COG: yjgX COG2194 # Protein_GI_number: 16132096 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 50 197 1 148 148 273 98.0 2e-73 MVKGTVVGTTDTLREMQRYEQLSQHGADNWKIQPGAPLYDTIVIVTGESVRRDYMSVYGY PVPTTPWLNTAPGLFIDDYTSTASSTVSSLSRTLIYDYEQNPDSGNNVVALAAKAGYSTW WISNQGKLGEHDTRISVIASDAEHATFLKKGSFASRKTDDKLLLQETERALADTSSPKII FLHMMGSHPNPCDSLNSWPNNYLEQYPRKIACYLASISKLDNFLGQLDGILRRYSRHFAM LYFSGLGLSVSDSANPVHHYGHVQGGYSVPLIITASDITSHQPVSRKISARHFAGIFQWM TGICTENIPPFNPLTDEDN >gi|299857063|gb|ADWS01000001.1| GENE 50 58088 - 58318 96 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSVRVTGNNASRGGESVVMDGRWGVVVKILSNVRGAKAPSCSTSVTCRKSPGIAISLTTP LEPVQNLQKTLQEKAK >gi|299857063|gb|ADWS01000001.1| GENE 51 59403 - 60731 752 442 aa, chain - ## HITS:1 COG:yi41 KEGG:ns NR:ns ## COG: yi41 COG3385 # Protein_GI_number: 16132099 # Func_class: L Replication, recombination and repair # Function: FOG: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 442 1 442 442 880 99.0 0 MHIGQALDLVSRYNSLRNPLTSLGDYLDPELISRCLAESGTVTLRKRRLPLEMMVWCIVG MALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQARQRLGSEAVRHVFTKTAQLWHNATP HPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTHAGNPALYPQVKMVCQMELTSHLLTAA AFGTMKNSENELAEQLIEQTGDNTLTLMDKGYYSLGLLNAWSLAGEHRHWMIPLRKGAQY EEIRKLGKGDHLVKLKTSPQARKKWPGLGNEVTARLLTVTRKGKVCHLLTSMTDAMRFPG GEMGDLYSHRWEIELGYREIKQTMQRSRLTLRSKKPELVEQELWGVLLAYNLVRYQMIKM AEHLKGYWPNQLSFSESCGMVMRMLMTLQGASPGRIPELMRDLASMGQLVKLPTRRERAF PRVVKERPWKYPTAPKKSQSVA >gi|299857063|gb|ADWS01000001.1| GENE 52 61358 - 62266 166 302 aa, chain + ## HITS:1 COG:yjhB KEGG:ns NR:ns ## COG: yjhB COG0477 # Protein_GI_number: 16132100 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 300 21 320 425 559 99.0 1e-159 MATAWYKQVNPPQRKALFSAWLGYVFDGFDFMMIFYILHIIKADLGITDIQATLIGTVAF IARPIGGGFFGAMADKYGRKPMMMWAIIIYSVGTGLSGIATNLYMLAVCRFIVGLGMSGE YACASTYAVESWPKNLQSKASAFLVSGFSVGNIIAAQIIPQFAEVYGWRNSFFIGLLPVL LVLWIRKSAPESQEWIEDKYKDKSTFLSVFRKPHLSISMIVFLVCFCLFGANWPINGLLP SYLADNGVNTVVISTLMTIAGLGTLTGTIFFGFVGDKIGVKKAFVVGLITSFVFLCPLFL FL >gi|299857063|gb|ADWS01000001.1| GENE 53 62263 - 62574 148 103 aa, chain + ## HITS:1 COG:yjhB KEGG:ns NR:ns ## COG: yjhB COG0477 # Protein_GI_number: 16132100 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 103 323 425 425 175 99.0 2e-44 MKNSSLIGLCLFGLMFTNLGIAGLVPKFIYDYFPTKLRGLGTGLIYNLGATGGMAAPVLA TYISGYYGLGVSLFIVTVAFSALLILLVGFDIPGKIYKLSVAK >gi|299857063|gb|ADWS01000001.1| GENE 54 62586 - 63704 357 372 aa, chain + ## HITS:1 COG:yjhC KEGG:ns NR:ns ## COG: yjhC COG0673 # Protein_GI_number: 16132101 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 372 6 377 377 776 100.0 0 MINYGVVGVGYFGAELARFMNMHDNAKITCVYDPENGENIARELQCINMSSLDALVSSKL VDCVIVATPNYLHKEPVIKAAKNKKHVFCEKPIALSYEDCVDMVKACKEAGVTFMAGHIM NFFNGVQYARKLIKEGVIGEILSCHTKRNGWENKQERLSWKKMKEQSGGHLYHHIHELDC VQHLLGEIPETVTMIGGNLAHSGPGFGNEDDMLFMTLEFPSGKLATLEWGSAFNWPEHYV IINGTKGSIKIDMQETAGSLRIGGQTKHFLVHETQEEDDDRRKGNMTSEMDGAIAYGHPG KKTPLWLASLIRKETLFLHNILCGAKPEEDYIDLLNGEAAMSAIATADAATLSRSQDRKV KISEIIKHTSVM >gi|299857063|gb|ADWS01000001.1| GENE 55 63925 - 64182 154 85 aa, chain - ## HITS:1 COG:no KEGG:ECBD_3760 NR:ns ## KEGG: ECBD_3760 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 85 32 116 116 170 98.0 2e-41 MVSSSASNVVNCETKQRTQFECIYFSQYWAKGDFIAKPAPIGQWEPYSEESLLGIIVTSV CRIKVAMLKPEPPRDPHIPLMGDFN >gi|299857063|gb|ADWS01000001.1| GENE 56 64160 - 64408 139 82 aa, chain + ## HITS:1 COG:no KEGG:B21_04108 NR:ns ## KEGG: B21_04108 # Name: yjhE # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 82 1 82 82 140 100.0 2e-32 MLADELTIGPIRAVPMDITPKYVGIASGLMNAGSAVADIISPIAFGIIIDKTGNWSLPFY GSVALLVIGIFLTFFMRPDKSL >gi|299857063|gb|ADWS01000001.1| GENE 57 64496 - 64768 229 90 aa, chain + ## HITS:1 COG:yi91a KEGG:ns NR:ns ## COG: yi91a COG2963 # Protein_GI_number: 16128240 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 86 13 98 134 147 95.0 4e-36 MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPI TPEQIEIRKLRKKLQRIEMENEILKRLPRS >gi|299857063|gb|ADWS01000001.1| GENE 58 65010 - 65423 227 137 aa, chain + ## HITS:1 COG:b4285 KEGG:ns NR:ns ## COG: b4285 COG2801 # Protein_GI_number: 16132106 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 137 62 198 198 280 100.0 7e-76 MGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIW TGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPVGVMFQAIKAVII RAGSSGSYCGDTGSGRV >gi|299857063|gb|ADWS01000001.1| GENE 59 65456 - 65662 99 68 aa, chain + ## HITS:1 COG:VC0257 KEGG:ns NR:ns ## COG: VC0257 COG2801 # Protein_GI_number: 15640286 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Vibrio cholerae # 1 68 223 290 290 98 66.0 2e-21 MERFFRSLKNEWVPATGYVSFSDAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKN SNAEASFS >gi|299857063|gb|ADWS01000001.1| GENE 60 65745 - 66002 174 85 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4958 NR:ns ## KEGG: EC55989_4958 # Name: yjhV # Def: conserved hypothetical protein; KpLE2 phage-like element # Organism: E.coli_55989 # Pathway: not_defined # 1 85 53 137 137 184 100.0 1e-45 MTLVNDTGFDPVFSGSIAESWRQQPCTPSYCCDWEAATMLRAFPLAKKGEGRARLPSLYA SFGKLGETPTHEDIIDNNRSINWPV >gi|299857063|gb|ADWS01000001.1| GENE 61 66559 - 67326 228 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 225 2 226 245 92 25 2e-17 MTLRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTLLNCFSRLLMPQSGTVF LGDNPINMLSSRQLARRLSLLPQHHLTPEGITVQELVSYGRNPWLSLWGRLSAEDNARVN VAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVVLLDEPTTYLDINHQVDLMRL MGELRTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMAQGTPEEVMTPGLLRTVFSVEAE IHPEPVSGRPMCLMR >gi|299857063|gb|ADWS01000001.1| GENE 62 67327 - 68283 844 318 aa, chain - ## HITS:1 COG:fecD KEGG:ns NR:ns ## COG: fecD COG0609 # Protein_GI_number: 16132109 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli K12 # 1 318 1 318 318 493 99.0 1e-139 MKIALVIFITLALAGCALLSLHMGVIPVPWRALLTDWQAGREHYYVLMEYRLPRLLLALF VGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLLMPSLPVMVLPLLAFAGGM AGLILLKMLAKTHQPMKLALTGVALSACWASLTDYLMLSRPQDVNNALLWLTGSLWGRDW SFVKIAIPLMILFLPLSLSFCRDLDLLALGDARATTLGVSVPHTRFWALLLAVAMTSTGV AACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTGALLLVVADLLARIIHPPLELPVGV LTAIIGAPWFVWLLVRMR >gi|299857063|gb|ADWS01000001.1| GENE 63 68280 - 69257 588 325 aa, chain - ## HITS:1 COG:fecC KEGG:ns NR:ns ## COG: fecC COG0609 # Protein_GI_number: 16132110 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli K12 # 1 325 8 332 332 496 99.0 1e-140 MLLWGLPVAALIIIFWLSLFCYSAIPVSGADATRALLPGHTPTLPEALVQNLRLPRSLVA VLIGASLALAGTLLQTLTHNPMASPSLLGINSGAALAMALTSALSPTPIAGYSLSFIAAC GGGVSWLLVMTAGGGFRHTHDRNKLILAGIALSAFCMGLTRITLLLAEDHAYGIFYWLAG GVSHARWQDVWQLLPVVVTAVPVVLLLANQLNLLNLSDSTAHTLGVNLTRLRLVINMLVL LLVGACVSVAGPVAFIGLLVPHLARFWAGFDQRNVLPVSMLLGATLMLLADVLARALAFP GDLPAGAVLALIGSPCFVWLVRRRG >gi|299857063|gb|ADWS01000001.1| GENE 64 69275 - 70177 929 300 aa, chain - ## HITS:1 COG:fecB KEGG:ns NR:ns ## COG: fecB COG4594 # Protein_GI_number: 16132111 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-citrate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 300 3 302 302 549 99.0 1e-156 MLAFIRFVFAGLLLVISHAFAATVQDEHGTFTLEKTPQRIVVLELSFADALAAVDVSPIG IADDNDAKRILPEVRAHLKPWQSVGTRAQPSLEAIAALKPDLIIADSSRHAGVYIALQQI APVLLLKSRNETYAENLQSAAIIGEMVGKKREMQARLEQHKERMAQWASQLPKGTRVAFG TSREQQFNLHTQETWTGSVLASLGLNVPAAMAGASMPSIGLEQLLAVNPAWLLVAHYREE SIVKRWQQDPLWQMLTAAQKQQVASVDSNTWARMRGIFAAERIAADTVKIFHHQPLTVVK >gi|299857063|gb|ADWS01000001.1| GENE 65 70222 - 72546 2306 774 aa, chain - ## HITS:1 COG:fecA KEGG:ns NR:ns ## COG: fecA COG4772 # Protein_GI_number: 16132112 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for Fe3+-dicitrate # Organism: Escherichia coli K12 # 1 774 1 774 774 1537 99.0 0 MTPLRVFRKTTPLVNAIRLSLLPLAGLSFSAFAAQVNIAPGSLDKALNQYAAHSGFTLSV DASLTRGKQSNGLHGDYDVESGLQQLLDGSGLQVKPLGNNSWTLEPAPAPKEDALTVVGD WLGDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGSHDLAMNF GIRGLNPRLTSRSTVLMDGIPVPFAPYGQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQS VGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPKETHNLMVGGTADNGFGTALLYSGT RGSDWREHSATRIDDLMLKSKYAPDEVHTFNSLLQYYDGEADMPGGLSRADYDADRWQST RPYDRFWGRRKLASLGYQFQPDSQHKFNIQGFYTQTLRSGYLEQGKRITLSPRNYWVRGI EPRYSQIFMIGPSAHEVGVGYRYVNESTHEMRYYTATSSGQLPSGSSPYDRDTRSGTEAH AWYLDDKIDIGNWTITPGMRFEHIESYQNNAITGTHEEVSYNAPLPALNVLYHLTDSWNL YANTEGSFGTVQYSQIGKAVQSGNVEPEKARTWELGTRYDDGALTAEMGLFLINFNNQYD SNQTNDTVTARGKTRHTGLETQARYDLGTLTPTLDNVSIYASYAYVNAEIREKGDTYGNL VPFSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGAR VAYDFGPQMADLNLAFGVKNIFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF >gi|299857063|gb|ADWS01000001.1| GENE 66 72633 - 73586 636 317 aa, chain - ## HITS:1 COG:fecR KEGG:ns NR:ns ## COG: fecR COG3712 # Protein_GI_number: 16132113 # Func_class: P Inorganic ion transport and metabolism; T Signal transduction mechanisms # Function: Fe2+-dicitrate sensor, membrane component # Organism: Escherichia coli K12 # 1 317 1 317 317 567 100.0 1e-161 MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQL GGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSR QQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTAL GTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDEST SWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL PVKIQSITRYWINISPL >gi|299857063|gb|ADWS01000001.1| GENE 67 73583 - 74104 368 173 aa, chain - ## HITS:1 COG:fecI KEGG:ns NR:ns ## COG: fecI COG1595 # Protein_GI_number: 16132114 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Escherichia coli K12 # 1 173 1 173 173 326 100.0 1e-89 MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRD PRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDG LNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAVEHCLLFRLEYGL >gi|299857063|gb|ADWS01000001.1| GENE 68 74800 - 75093 298 97 aa, chain + ## HITS:1 COG:ECs1372 KEGG:ns NR:ns ## COG: ECs1372 COG1662 # Protein_GI_number: 15830626 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli O157:H7 # 1 97 71 167 167 179 98.0 8e-46 MAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNL NLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|299857063|gb|ADWS01000001.1| GENE 69 75028 - 75333 268 101 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2330 NR:ns ## KEGG: UTI89_C2330 # Name: wcaD # Def: putative colanic acid biosynthesis protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 90 25 119 430 93 84.0 2e-18 MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLMIALG IGAGLTAFNYLFGQSGNDSNLLIVFYVQIMPDDLVMQLHRF >gi|299857063|gb|ADWS01000001.1| GENE 70 75308 - 76525 1234 405 aa, chain - ## HITS:1 COG:ECs2862 KEGG:ns NR:ns ## COG: ECs2862 COG0438 # Protein_GI_number: 15832116 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 405 1 405 405 854 99.0 0 MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP RMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKV KNHKPDITLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGK RQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQG RPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKL MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQ LVQLSKPEIAQAIFGTTLAEFIQRSRAAYSGQQMLEEYVNFYQNL >gi|299857063|gb|ADWS01000001.1| GENE 71 76522 - 77010 454 162 aa, chain - ## HITS:1 COG:ECs2863 KEGG:ns NR:ns ## COG: ECs2863 COG1045 # Protein_GI_number: 15832117 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 320 100.0 8e-88 MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPLLVLYRIITECFFGYEI QAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRGADNMACPHIGNGVELGAN VIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKVIK >gi|299857063|gb|ADWS01000001.1| GENE 72 77013 - 77852 680 279 aa, chain - ## HITS:1 COG:ECs2864 KEGG:ns NR:ns ## COG: ECs2864 COG0463 # Protein_GI_number: 15832118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 # 1 279 1 279 279 570 99.0 1e-163 MKDNPLISIYMPTWNRQQLAIRAIKSVLRQDYNNWEMIIVDDCSTSWEQLQQYVTALNDP RITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLY ANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQVFTWAWRFKECLFDTELKAAQ DYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHKDKFDRASK KYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGIRGR >gi|299857063|gb|ADWS01000001.1| GENE 73 77945 - 80107 2635 720 aa, chain - ## HITS:1 COG:wzc_1 KEGG:ns NR:ns ## COG: wzc_1 COG3206 # Protein_GI_number: 16130000 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Escherichia coli K12 # 1 480 13 492 492 913 98.0 0 MTEKVKQHAAPVTGSDEIDIGRLVGTVIEARWWVIGITAVFALCAVVYTFFATPIYSADA LVQIEQSSGNSLVQDIGSALANKPPASDAEIQLIRSRLVLGKTVDDLDLDIAVSKNTFPI FGAGWDRLMGRQNETVKVTTFNRPKEMADQVFTLNVLDDKNYTLSSDGGFSARGQAGQML TKEGVTLMVEAIHASPGSEFTITKYSTLGMINQLQNSLTVTENGKDAGVLSLTYTGEDRE QIRDILNSIARNYQEQNIERKSAEASKSLAFLAQQLPEVRSRLDVAENKLNAFRQDKDSV DLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLYTKVHPAYRTLLEKRQALEDEKAKLNG RVTAMPKTQQEIVRLTRDVESGQQVYMQLLNKEQELKITEASTVGDVRIVDPAITQPGVL KPKKGLIILGAIILGLMLSIVGVLLRSLFNRGIESPQVLEEHGISVYASIPLSEWQKARD SVKTIKGVKRYKQSQLLAVGNPTDLAIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGK TFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSEILIGQGDITTAAKPTS IAKFDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVG TTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIFRRASAYQDYGYYEYEYKSDAK >gi|299857063|gb|ADWS01000001.1| GENE 74 80110 - 80553 423 147 aa, chain - ## HITS:1 COG:ECs2866 KEGG:ns NR:ns ## COG: ECs2866 COG0394 # Protein_GI_number: 15832120 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 296 100.0 1e-80 MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSL EGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKS RETFAAVYTLLERSARQWAQALNAEQV >gi|299857063|gb|ADWS01000001.1| GENE 75 80559 - 81698 1023 379 aa, chain - ## HITS:1 COG:ECs2867 KEGG:ns NR:ns ## COG: ECs2867 COG1596 # Protein_GI_number: 15832121 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Escherichia coli O157:H7 # 1 379 1 379 379 748 100.0 0 MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADFDLDKMVNVYPLTPRLI DQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPELTTPAGQYRSSSDTGNWV QPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQVDVNIAAFRSQKAYISGQVN KSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHNGREERISLQALMQNGDLNQNRL LYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDMTTSNASGIFV IRPLKGEGGRNGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAPVSRWNRLINQLL PTISGVRYMTDTASDIHNW >gi|299857063|gb|ADWS01000001.1| GENE 76 82357 - 83940 1662 527 aa, chain + ## HITS:1 COG:ECs2868_2 KEGG:ns NR:ns ## COG: ECs2868_2 COG1253 # Protein_GI_number: 15832122 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli O157:H7 # 232 527 1 296 296 577 100.0 1e-164 MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRDRARVTGLLLAMLMRLL LLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKATMELNERLEGKDSNNPTQR KGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLIMMAAVVIAISLMLMASKPLTQFVN SHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAIGFSVMIEALNQLAIFNRRRFLS ANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVDHGNQQIFNPQERRMIERVLNLNQR TVSSIMTSRHDIEHIDLNAPEDEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQS LRGEPLNLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTET IAGNLPNEVEEIDARHDIQKNADGSWTANGHMPLEDLVQYVPLPLDEKREYHTIAGLLME YLQRIPKPGEEVQVGDYLLKTLQVESHRVQKVQIIPLRKDGEMEYEV >gi|299857063|gb|ADWS01000001.1| GENE 77 84214 - 86067 1318 617 aa, chain - ## HITS:1 COG:asmA KEGG:ns NR:ns ## COG: asmA COG2982 # Protein_GI_number: 16130004 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli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gi|299857063|gb|ADWS01000001.1| GENE 78 86089 - 86670 689 193 aa, chain - ## HITS:1 COG:dcd KEGG:ns NR:ns ## COG: dcd COG0717 # Protein_GI_number: 16130005 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Escherichia coli K12 # 1 193 1 193 193 384 99.0 1e-107 MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDE VSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMV HVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPLSGPAARPYNRREDAKYR NQQGAVASRIDKD >gi|299857063|gb|ADWS01000001.1| GENE 79 86762 - 87403 608 213 aa, chain - ## HITS:1 COG:ECs2873 KEGG:ns NR:ns ## COG: ECs2873 COG0572 # Protein_GI_number: 15832127 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Escherichia coli O157:H7 # 1 213 19 231 231 418 100.0 1e-117 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE RVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGI LLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFI EPSKQYADIIVPRGGKNRIAIDILKAKISQFFE >gi|299857063|gb|ADWS01000001.1| GENE 80 87721 - 91038 2654 1105 aa, chain + ## HITS:1 COG:yegE_2 KEGG:ns NR:ns ## COG: yegE_2 COG2202 # Protein_GI_number: 16130007 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Escherichia coli K12 # 301 670 1 370 370 770 99.0 0 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN LADWLRLAFGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES ETRFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDRIRHIRALANRVLNKEGEVERLLGINMDM TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV TIYEPQQAAAHSERAAMSLDEQWRMIKENQLMMIAHGVASPRIPEARNLWLISLKLWNCE GEIIDEQTFRRSFSDPALSHALDRRVFHDFFQQAAKAVASKGISIALPLSVAGLSSATLV NDLLEQLENSPLPPRLLHLIIPAEAILDHAVSVQKLRLAGCRIVLSQVGRDLQIFNSLKA NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD LIYGDVIADAQPLDLLVNSSYFAIN >gi|299857063|gb|ADWS01000001.1| GENE 81 91077 - 91934 752 285 aa, chain - ## HITS:1 COG:alkA KEGG:ns NR:ns ## COG: alkA COG0122 # Protein_GI_number: 16130008 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Escherichia coli K12 # 1 280 1 280 282 547 97.0 1e-155 MYTLNWQPPYDWSWMLGFLAARAVSGVETVAEDYYARSLAVGEYRGVVTAIPDIARHTLH INLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAARPGLRLPGCIDAFEQGVRA ILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAE ALIHLANAALEGSLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDGTDEL >gi|299857063|gb|ADWS01000001.1| GENE 82 92068 - 93420 1491 450 aa, chain + ## HITS:1 COG:ECs2878 KEGG:ns NR:ns ## COG: ECs2878 COG0443 # Protein_GI_number: 15832132 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 450 22 471 471 888 99.0 0 MFIGFDYGTANCSVAVMRDGKPQLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADD DETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKP QQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINFQGLGGDEANAQAQGILERAA KRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREA SLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDF YSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLPF ISDELATLISQQGLESALSQPLARILEQVQLALDNAQEKPDVIYLTGGSARSPLIKKALA EQLPGIPIAGGDDFGSVTAGLARWAEVVFR >gi|299857063|gb|ADWS01000001.1| GENE 83 93432 - 95372 945 646 aa, chain - ## HITS:1 COG:yegI KEGG:ns NR:ns ## COG: yegI COG4248 # Protein_GI_number: 16130010 # Func_class: R General function prediction only # Function: Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains # Organism: Escherichia coli K12 # 5 646 7 648 648 1273 97.0 0 MKPTLYTATGECVTPGRELGKGGEGAVYDINEFVDSVAKIYHTPPPALKQDKLAFMAATA DAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQRYPHCAWDFLLY VARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINANGTLHLCEVGVSH FTPPELQTLSSFVGFERTANHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITH FRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSL RQQLKKCPVSAMHVYPAHLTDCPWCALDNQGVIYFIDLGEEVITTGGDFVLAKVWAMVMA SVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILLEIALSALSLLLCGLQAEPRYIILVP VLAAIWIIGSLTSKAYKAEVQQRREAFNRAKMDYDHLVRQIQQVGGLEGFIAKRTMLEKM KDEILGLPEEEKRALAALHDTARERQKQKFLEGFFIDVASIPGVGPARKAALRSFGIETA ADVTRRGVKQVKGFGDHLTQAVIDWKASCERRFVFRPNEAITPADRQAVMAKMTAKRHRL ESTLTVGATELQRFRLHAPARTMPLMEPLRQAAEKLAQAQADLSRC >gi|299857063|gb|ADWS01000001.1| GENE 84 95369 - 96049 484 226 aa, chain - ## HITS:1 COG:no KEGG:ECO103_2550 NR:ns ## KEGG: ECO103_2550 # Name: yegK # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 226 28 253 253 432 98.0 1e-120 MQVAWLNDQQPLLVMFLADGAGSVSQGGEGATLAVNEAMAYMSQKVQGGELGLNDILATD IVLTVCQRLFAEAEAKELAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDFGHGLQLPLT PMVGEYANMTHFITDEDAVSRLETFTSTERVHKVAAFTDGIQRLALNMLDNSPHVPFFTP FFNGLASATQEQLDLLPELLKQFLSSPAVNERTDDDKTLALALWLP >gi|299857063|gb|ADWS01000001.1| GENE 85 96127 - 96786 484 219 aa, chain - ## HITS:1 COG:yegL KEGG:ns NR:ns ## COG: yegL COG4245 # Protein_GI_number: 16130013 # Func_class: R General function prediction only # Function: Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain # Organism: Escherichia coli K12 # 1 219 1 219 219 406 99.0 1e-113 MSEQITFATSDFASNPEPRCPCILLLDVSGSMSGRPINELNAGLVTFRDELLADPLALKR VELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITKALDMVEERKREYRANGIS YYRPWIFLITDGAPTDEWQAAANKVFRGEEDKRFAFFSIGVQGADMKTLAQISVRQPLPL QGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTSV >gi|299857063|gb|ADWS01000001.1| GENE 86 98002 - 99249 1304 415 aa, chain + ## HITS:1 COG:ECs2882 KEGG:ns NR:ns ## COG: ECs2882 COG0845 # Protein_GI_number: 15832136 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 415 50 464 464 720 99.0 0 MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQQSPAGGRRGMRSGPLA PVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDP SQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIK ADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTL PESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQD DALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQ KVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSATTPEEKATSREYAKKGARS >gi|299857063|gb|ADWS01000001.1| GENE 87 99249 - 102371 3358 1040 aa, chain + ## HITS:1 COG:ECs2883 KEGG:ns NR:ns ## COG: ECs2883 COG0841 # Protein_GI_number: 15832137 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 1040 1 1040 1040 1806 99.0 0 MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLY PGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITLQFQLTLPLDVAEQEVQAA INAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPMTQVEDMVETRVAQKISQISG VGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPSRAVTLSA NDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKEQAIVMNVQRQPGA NIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVNDTQFELMMAIALVVMIIYL FLRNIPATIIPGFAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENIS RYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAI LISAVVSLTLTPMMCARMLSQESLRKQNRFSRASEKMFDRIIAAYGRGLAKVLNHPWLTL SVALSTLLLSVLLWVFIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDP AVQSLTSFVGVDGTNPSLNSARLQINLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQP TQDLTIDTQVSRTQYQFTLQATSLDALSTWVPELMEKLQQLPQLSDVSSDWQDKGLVAYV NVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTI RLTSSDGGVVPLSSIAKIEQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEK TLNLPVDITTQFQGSTLAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPT AGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQA CLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYL LFDRLALWTKSRFARHEEEA >gi|299857063|gb|ADWS01000001.1| GENE 88 102372 - 105449 2997 1025 aa, chain + ## HITS:1 COG:yegO KEGG:ns NR:ns ## COG: yegO COG0841 # Protein_GI_number: 16130016 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1025 1 1025 1025 1867 99.0 0 MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMA SSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLP SGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAPTISQIDGVGDVDVGGS SLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQGALEDGTHRWQIQTNDELKTAAE YQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSI RAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATI IPAVVVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP LQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLT LTPMMCGWMLKASKPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALN IWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTG GSRVNSGMMFITLKPRDERSETAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNAS YQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDV QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSY FAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAG TAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNA PFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLA ALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPK QTVTE >gi|299857063|gb|ADWS01000001.1| GENE 89 105450 - 106865 1417 471 aa, chain + ## HITS:1 COG:yegB KEGG:ns NR:ns ## COG: yegB COG0477 # Protein_GI_number: 16130017 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 471 1 471 471 749 99.0 0 MTDLPDSTRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAV MLPASGWLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGR LTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIA TLLLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSKGTGLSPLTIAGLVAVGVVALVL YLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAG LMMIPMVLGSMGMKRIVVHVVNRFGYRRVLVATTLGLSLVTLLFMTTALLGWYYVLPFVL FLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGSQH VSVDSGTTQTVFMYTWLSMALIIALPAFIFARVPNDTHQNVAISRRKRSAQ >gi|299857063|gb|ADWS01000001.1| GENE 90 106862 - 108265 1258 467 aa, chain + ## HITS:1 COG:baeS KEGG:ns NR:ns ## COG: baeS COG0642 # Protein_GI_number: 16130018 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 467 1 467 467 910 100.0 0 MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQRLQLLSDALGE QYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHGWRTQFWVVDQNNKVLVGP RAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFDKQQRQTSWLIVALATLLAAL ATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSEDELGKLAQDFNQLASTLEKNQQM RRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLHQLSM SDEGALAYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFSLPDSITVFGDRDRLMQLFNN LLENSLRYTDSGGSLQISAGQRDKTVRLTFADSAPGVSDDQLQKLFERFYRTEGSRNRAS GGSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVELPLERDLQREV >gi|299857063|gb|ADWS01000001.1| GENE 91 108262 - 108984 810 240 aa, chain + ## HITS:1 COG:baeR KEGG:ns NR:ns ## COG: baeR COG0745 # Protein_GI_number: 16130019 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 240 1 240 240 462 99.0 1e-130 MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILL DLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVAR VKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLDLTPAEFRLLKTLSHEPGKVF SREHLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWEADACRIV >gi|299857063|gb|ADWS01000001.1| GENE 92 109175 - 109507 396 110 aa, chain + ## HITS:1 COG:yegP KEGG:ns NR:ns ## COG: yegP COG3422 # Protein_GI_number: 16130020 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 110 14 123 123 169 99.0 9e-43 MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIASVRSNSPQEERYEKKT ASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGTSQTVKDNT >gi|299857063|gb|ADWS01000001.1| GENE 93 109761 - 110012 287 83 aa, chain + ## HITS:1 COG:STM2955 KEGG:ns NR:ns ## COG: STM2955 COG3609 # Protein_GI_number: 16766261 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 83 24 106 118 128 90.0 2e-30 MARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRDMLAEGL SSGEAQPWEKDAFLRKVKAGIRK >gi|299857063|gb|ADWS01000001.1| GENE 94 110014 - 110310 212 98 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2339 NR:ns ## KEGG: EC55989_2339 # Name: not_defined # Def: conserved hypothetical protein, putative plasmid stabilisation system protein # Organism: E.coli_55989 # Pathway: not_defined # 1 98 1 98 98 195 100.0 4e-49 MRIIKLMPKANEDLEGIWYYSYHHFGEPQADRYVEHLSDVLQILSNNNIGTPRPELGEGI FVLPFERHVIYFLQSPGEIIVIRILNQNQDATRHLHWS >gi|299857063|gb|ADWS01000001.1| GENE 95 110413 - 111774 1460 453 aa, chain + ## HITS:1 COG:yegQ KEGG:ns NR:ns ## COG: yegQ COG0826 # Protein_GI_number: 16130021 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli K12 # 1 453 1 453 453 929 100.0 0 MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGK KFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPEMPIHLSVQAN AVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDMEIEIFVHGALCMAYSGRCLLS GYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKYEPIPVQNVEPTLGIGAPTDKVF MIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTKMGVHSLKIEGRTKSFYYCAR TAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGYTEGFLRRHTHDDYQNYEYGYSVSDRQ QFVGEFTGERKGDLAAVAVKNKFSVGDSLELMTPQGNINFTLEHMENAKGEAMPIAPGDG YTVWLPVPQDLELNYALLMRNFSGETTRNPHGK >gi|299857063|gb|ADWS01000001.1| GENE 96 112104 - 112481 229 125 aa, chain - ## HITS:1 COG:no KEGG:ECSE_2357 NR:ns ## KEGG: ECSE_2357 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 125 1 125 125 252 100.0 3e-66 MPLLYLNTRECRWYLMGEGEMKKIAAISLISIFIMSGCAVHNDETSIGKFGLAYKSNIQR KLDNQYYTEAEASLARGRISGAENIVKNDAAHFCVTQGKKMQIVDLKTEGAGLHGVARLT FKCGE >gi|299857063|gb|ADWS01000001.1| GENE 97 112836 - 113735 628 299 aa, chain + ## HITS:1 COG:ECs2892 KEGG:ns NR:ns ## COG: ECs2892 COG1597 # Protein_GI_number: 15832146 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 596 100.0 1e-170 MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKLGVAT VIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGN AIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGGVSYIIHGLMRMDTLQPDRC EIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLK SDEDNPNIIEGASSWFDIQAPHEITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR >gi|299857063|gb|ADWS01000001.1| GENE 98 113817 - 114590 514 257 aa, chain - ## HITS:1 COG:gatR KEGG:ns NR:ns ## COG: gatR COG1349 # Protein_GI_number: 16132228 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 257 3 259 259 454 99.0 1e-128 MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAK NITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADG IDAVNGITTFNEGYSVSGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVS EVDKLALQKTRVKLITV >gi|299857063|gb|ADWS01000001.1| GENE 99 114696 - 115736 648 346 aa, chain - ## HITS:1 COG:ECs2894 KEGG:ns NR:ns ## COG: ECs2894 COG1063 # Protein_GI_number: 15832148 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 346 1 346 346 714 100.0 0 MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHE FSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEY IVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCA VALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVP QTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWE TASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP >gi|299857063|gb|ADWS01000001.1| GENE 100 115785 - 117140 1462 451 aa, chain - ## HITS:1 COG:ECs2895 KEGG:ns NR:ns ## COG: ECs2895 COG3775 # Protein_GI_number: 15832149 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Escherichia coli O157:H7 # 1 451 1 451 451 806 99.0 0 MFSEVMRYILDLGPTVMLPVVIIIFSKILGMKAGDCFKAGLHIGIGFVGIGLVIGLMLDS IGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPIAILVNVAMLLTRMTRVVN VDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKLGDWFARDTRNFFELEGIAIP HGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKFGPFGEPVTVGFVMGLIIGILAG YDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKQARSRLQAKFGGQEFLIGLDPALL LGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGDLATIGFFVAMAVAVHRGNLFRTLISG VIIMSITLWIATQTIGLHTQLAANAGALKAGGMVASMDQGGSPITWLLIQVFSPQNIPGF IIIGAIYLTGIFMTWRRARGFIKQEKVVLAE >gi|299857063|gb|ADWS01000001.1| GENE 101 117144 - 117428 331 94 aa, chain - ## HITS:1 COG:gatB KEGG:ns NR:ns ## COG: gatB COG3414 # Protein_GI_number: 16130031 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Escherichia coli K12 # 1 94 1 94 94 179 98.0 8e-46 MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEIETYMDGVHLICTTAKV DRSFGDIPLVHGMPFISGVGIEALQNKILTILQG >gi|299857063|gb|ADWS01000001.1| GENE 102 117459 - 117911 292 150 aa, chain - ## HITS:1 COG:ECs2897 KEGG:ns NR:ns ## COG: ECs2897 COG1762 # Protein_GI_number: 15832151 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 294 100.0 4e-80 MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIAREAEFPTGIMLEQHAIAI PHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVAVSLVIALIVENPQQQLKLLRCLFGKL QQPDIVETLITLPETQLKEYFTKYVLDSDE >gi|299857063|gb|ADWS01000001.1| GENE 103 117921 - 119183 1014 420 aa, chain - ## HITS:1 COG:gatZ KEGG:ns NR:ns ## COG: gatZ COG4573 # Protein_GI_number: 16130033 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Escherichia coli K12 # 1 420 1 420 420 862 99.0 0 MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMT PADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAAMEKSVELVKEYVRAGFSK IHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPVPGGEAS AIQSVHITHVEDTANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEA QPLAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFAILKVGPALTFALREAIFALAQIEQ ELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGFNDSLLDIRYSLSDRIRYYWPHSRIKN SVETMMVNLEGVDIPLGMISQYLPKQFERIQSGELSAIPHQLIMDKIYDVLRAYRYGCAE >gi|299857063|gb|ADWS01000001.1| GENE 104 119212 - 120066 667 284 aa, chain - ## HITS:1 COG:ECs2899 KEGG:ns NR:ns ## COG: ECs2899 COG0191 # Protein_GI_number: 15832153 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 1 284 3 286 286 557 99.0 1e-159 MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAPVIIAGTPGTFTHAGTE NLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVMIDASHLPFAQNISRVKEV VDFCHRFDVSVEAELGQLGGQEDDVQVNEADAFYTNPAQAREFAEATGIDSLAVAIGTAH GMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDIQQTIKLGICKINVATELKNAFS QALKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIADCGCEGRA >gi|299857063|gb|ADWS01000001.1| GENE 105 120375 - 121427 1185 350 aa, chain - ## HITS:1 COG:ECs2900 KEGG:ns NR:ns ## COG: ECs2900 COG1830 # Protein_GI_number: 15832154 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Escherichia coli O157:H7 # 1 350 25 374 374 695 100.0 0 MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTG RLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVS RRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIE EISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLS DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA >gi|299857063|gb|ADWS01000001.1| GENE 106 121684 - 122961 1396 425 aa, chain + ## HITS:1 COG:yegT KEGG:ns NR:ns ## COG: yegT COG0477 # Protein_GI_number: 16130036 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 425 1 425 425 765 100.0 0 MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYACTAIAAILSPILVGSI TDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYSLTYMPTIALTNSIAFANV PDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPTNIPLLITAGSSALLGVFAFF LPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCSFLFAMPLAFYYIFANGYLTEVG MKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLVTAAIRYGFFIYGSADEYFTY ALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMRTAAQGLITLCCQGFGSLLGYRLGGVM MEKMFAYQEPVNGLTFNWSGMWTFGAVMIAIIAVLFMIFFRESDNEITAIKVDDRDIALT QGEVK >gi|299857063|gb|ADWS01000001.1| GENE 107 122958 - 123962 1017 334 aa, chain + ## HITS:1 COG:yegU KEGG:ns NR:ns ## COG: yegU COG1397 # Protein_GI_number: 16130037 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Escherichia coli K12 # 1 334 1 334 334 640 99.0 0 MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPGPKENNAACYFNRAEFT DDTSMALCLADALLEREGKIDPDLIGRNILDWALRFDAFNKNVLGPTSKIALNAIRDGKP VAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALASSPTHKSDLAVAGAVVIAWAI SRAIDGESWSAIVDSLPSIARHAQQKRTTTFSASLAARLEIALKIVRNADGTESASEQLY QVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCANLGGDTDTIGAMATAICGALHGVNA IDPALKAELDAVNQLDFNRYATALAKYRQQREVV >gi|299857063|gb|ADWS01000001.1| GENE 108 123959 - 124924 842 321 aa, chain + ## HITS:1 COG:ECs2903 KEGG:ns NR:ns ## COG: ECs2903 COG0524 # Protein_GI_number: 15832157 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 628 98.0 1e-180 MSGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIELKQQSVNVGGCALNIA VALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAEGDNGWCLALVEPDGERTF MSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGELLVEWLEELQDVTPFIDFGPR IGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGEQWQEKFAAPLIVRLDK EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNAVASWVV GHRGGDCAPTREELLLAHKNV >gi|299857063|gb|ADWS01000001.1| GENE 109 124898 - 125644 631 248 aa, chain - ## HITS:1 COG:ECs2904 KEGG:ns NR:ns ## COG: ECs2904 COG2188 # Protein_GI_number: 15832158 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 477 100.0 1e-135 MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVS RITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFSQQVVLRGKKPDTLWVNKR VVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESWVPAHLIHDVDAIGISLYDYF RSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVIKQVALDQQQRPIEYSISHCRSD LYVFVCEE >gi|299857063|gb|ADWS01000001.1| GENE 110 125696 - 126514 545 272 aa, chain - ## HITS:1 COG:yegX KEGG:ns NR:ns ## COG: yegX COG3757 # Protein_GI_number: 16130040 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Escherichia coli K12 # 1 272 4 275 275 549 98.0 1e-156 MQLRITSRKKLTSLLCALGLISIVAIYPRQTVNFFYSTAVQITDYIHFYSYRPVKSFAIR IPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKATEGEKLVDPYFSRNWQLSR ENGLLRGAYHYFSPSVAAPVQARLFLQTVDFSQGDFPAVLDVEERGKLSAKELRKRVSQW LKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAHYYQRRPDNDGMAWRFWQHSDRG QVDGINGPVDFNVFHGTVEELQAFVDGIKETP >gi|299857063|gb|ADWS01000001.1| GENE 111 126579 - 127379 707 266 aa, chain - ## HITS:1 COG:thiD KEGG:ns NR:ns ## COG: thiD COG0351 # Protein_GI_number: 16130041 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Escherichia coli K12 # 1 266 1 266 266 516 100.0 1e-146 MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQNTRGVQSVYRIEPDFV AAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNVVLDTVMLAKSGDPLLSPS AVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLEQGRSLLAMGCGAVLMKGGHL DDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAALAALRPRHTNWADTVQEAKSWL SSALAQADTLEVGHGIGPVHHFHAWW >gi|299857063|gb|ADWS01000001.1| GENE 112 127376 - 128083 409 235 aa, chain - ## HITS:1 COG:ECs2907 KEGG:ns NR:ns ## COG: ECs2907 COG2145 # Protein_GI_number: 15832161 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Escherichia coli O157:H7 # 1 235 28 262 262 400 94.0 1e-111 MTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQLRAQSMCAAVE QAKSSQTPWTLDPVAVGALDYRRRFCLELLSHKPTAIRGNASEIMALAGIANGGRGVDTT DAAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVV ATCCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA >gi|299857063|gb|ADWS01000001.1| GENE 113 128387 - 128659 357 90 aa, chain - ## HITS:1 COG:ECs2911 KEGG:ns NR:ns ## COG: ECs2911 COG1937 # Protein_GI_number: 15832165 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 145 98.0 3e-35 MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLIREVIKGH LTEHIVHQGDELKREEDLDVVLKVLDSYIK >gi|299857063|gb|ADWS01000001.1| GENE 114 128780 - 129604 545 274 aa, chain + ## HITS:1 COG:ZyohM KEGG:ns NR:ns ## COG: ZyohM COG2215 # Protein_GI_number: 15802585 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 EDL933 # 1 274 1 283 283 448 90.0 1e-126 MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIAIKGTIKQAVMLGLAAT ISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIIGTAFWMFWRTWRGERNWLENM HEYDHEHHHHDHEDHHDHGHHHHHEHGEYQDAHARAHANDIKRRFDGREVTNWQILLFGL TGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLALTLVTVGVGAAISVQQVAKRWS GFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR >gi|299857063|gb|ADWS01000001.1| GENE 115 129823 - 130161 307 112 aa, chain + ## HITS:1 COG:yohN KEGG:ns NR:ns ## COG: yohN COG5455 # Protein_GI_number: 16130045 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 112 61 172 172 209 100.0 1e-54 MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYR TDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR >gi|299857063|gb|ADWS01000001.1| GENE 116 130243 - 131082 363 279 aa, chain - ## HITS:1 COG:no KEGG:G2583_2644 NR:ns ## KEGG: G2583_2644 # Name: yehA # Def: putative fimbrial-like adhesin protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 279 66 344 344 454 99.0 1e-126 MSPSDIIVGLYNDTIKLNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAG GGGSVMINGVATLSSASSSTRRSAAVQFLLCLLGGKSWDACVNSYRNALAQNAGVYSFNL TLSYNPITTTCKPDDLLITLDSIPVSQLPATGNKATINSKQGDIILRCKNLLGQQNQTSR KMQVYLSSSDLLTNSNTILKGAEDNGVGFILESNGSSVTLLNITNSSKGYTNLKEIAAKS KLTDTTVSIPITASYYVYDTNKVKSGALEATALINVKYD >gi|299857063|gb|ADWS01000001.1| GENE 117 131291 - 133771 1491 826 aa, chain - ## HITS:1 COG:yehB KEGG:ns NR:ns ## COG: yehB COG3188 # Protein_GI_number: 16130047 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 826 1 826 826 1600 98.0 0 MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDI YVNKQWRGKYEIIVKDNPQETCLSIEVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDI GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYVSQYYSDYKASGNSKSTYVRF NSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ AGYQYGFNNLLTLYGGSMVANNYYAFTLGTGWNTRFGAISVDATKSHSKQDNGDVFDGQS YQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYILAASQ AYDENHHEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSR DQFNYGVNLSYQNQGNETTAGANLTWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGG VNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQPLMFGYEVNDIHGHNIGVV GQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ >gi|299857063|gb|ADWS01000001.1| GENE 118 133787 - 134461 395 224 aa, chain - ## HITS:1 COG:yehC KEGG:ns NR:ns ## COG: yehC COG3121 # Protein_GI_number: 16130048 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 224 16 239 239 413 99.0 1e-115 MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTS LPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEG KNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDVKANN VKVNYETIMIAPLESQSVNVKSNNANNWYLTIIDDHGNYISDKI >gi|299857063|gb|ADWS01000001.1| GENE 119 134542 - 135084 462 180 aa, chain - ## HITS:1 COG:yehD KEGG:ns NR:ns ## COG: yehD COG3539 # Protein_GI_number: 16130049 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 180 1 180 180 315 99.0 4e-86 MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTT VFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGYY LYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD >gi|299857063|gb|ADWS01000001.1| GENE 120 135217 - 136140 334 307 aa, chain + ## HITS:1 COG:no KEGG:EFER_3918 NR:ns ## KEGG: EFER_3918 # Name: not_defined # Def: transposase, IS903.B # Organism: E.fergusonii # Pathway: not_defined # 1 307 16 322 322 595 97.0 1e-169 MAKQKFRITNWSTYNKALINRGSLTFWLDDGAIQAWYESATPSSRGRPQRYSDLAITTVL VIKRVFRLTLRAAQGFIDSIFTLMNVPLRCPDYSCVSRRAKSVNVSFKTFTRGEIAHLVI DSTGLKVFGEGEWKVKKHGQERRRIWRKLHLAVDSNTHEIICADLSLNNVTDSEAFPGLI RQTHRKIRAASADGAYDTRLCHDELRRKKISALIPPRKGAGYWPGEYADRNRAVANQRMT GSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQVAEAMALVRALNKMTKAGM PESVRIA >gi|299857063|gb|ADWS01000001.1| GENE 121 136443 - 136724 130 93 aa, chain - ## HITS:1 COG:no KEGG:JW2099 NR:ns ## KEGG: JW2099 # Name: yehE # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 93 1 93 93 189 100.0 3e-47 MNKYWLSGIIFLAYGLASPAFSSETATLAINGRISPPTCSMAMVNGQPQQHCGQLTYNVD TRHLFSSPVKGVTTEVVVAGSDSKRRIVLNRYD >gi|299857063|gb|ADWS01000001.1| GENE 122 136987 - 138096 1132 369 aa, chain - ## HITS:1 COG:ECs2919 KEGG:ns NR:ns ## COG: ECs2919 COG0489 # Protein_GI_number: 15832173 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 1 369 11 379 379 726 100.0 0 MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAWMDDTLHVELVMPFVWH SAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPGINGVKNIIAVSSGKGGVG KSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLAT NSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPV TGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEK LAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVI PGEISFRAV >gi|299857063|gb|ADWS01000001.1| GENE 123 138228 - 140261 2372 677 aa, chain + ## HITS:1 COG:ZmetG_1 KEGG:ns NR:ns ## COG: ZmetG_1 COG0143 # Protein_GI_number: 15802593 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Escherichia coli O157:H7 EDL933 # 1 567 1 567 567 1205 99.0 0 MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIM LKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFI KNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSG ATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFG FEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVY FHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYY TAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQLYK TFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSM GINLFRVLMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQV EALVEASKEEVKAAAAPVTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLR LTLDLGGEKRNVFSGIRSAYPDPQALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKD IFLLSPDAGAKPGHQVK >gi|299857063|gb|ADWS01000001.1| GENE 124 140402 - 144196 2059 1264 aa, chain + ## HITS:1 COG:molR_g1_1 KEGG:ns NR:ns ## COG: molR_g1_1 COG3831 # Protein_GI_number: 16130053 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 112 1 112 112 203 98.0 2e-51 MRHFIYQDEKSHKFWAVEQQGNELHISWGKVGTKGQSQIKSFSDAAAAAKAELKLIAEKV KKGYVEQAKVNSLQPSQTVTGSLKVADLSTIIQEQPSFVAETRAPDKNTDAVLPWLAKDI AVVFPPEVVHTTLSHRRFPGVPVQQADKLTQLRRLACSVSQRDNKTATFDFSACSLEWQN TVAQAISQIDGLKTTQLPSPVMAVLTALEMKCTRYKVREDVMDQIVQEGGLEYATDVIIH LQQIDIKWDYANNVIIILPSGIAPDYLEQYSRFELRLRKHLSLAEESLWQKCAQKLIAAI PHIPEWRQPLIALLLPEKPEIAHEIAQRLLGQKKLPSLEWLKIVATDEHILASLEKYHEP YAIFDDYYCGAIWSATVLQEQGVAALPRFAPYAASDYCADVLRHINHPFALTLLIRVAGH TKRCHDRMTKAIAAFPHAAMAALTELLGQKEENSWRIMLMTMLISQPALAEQVIPWLSTP AVAVLKSCQQQLTQPSNHASADLLPAVVVSPPWLSKKKKSPIPVLDLAPLGIEPICYLTE EISNQLLAKYIWYSKHITVSHEESTTNLLARMGFQRRIAGTYIKAPEAVVEAWLNEDYST LLSEFKVFHSPTGHYWQLGILTTLPLEKAVKAWNALTLSPHTDTEYAMLHFGLKGLPRLV NSLARYPQEALPITNYFAASELAPAVARAFNKLKTLRENARSWLLKYPEHALTGLLPAAL GKAGEAQDNARAALRMLTENGHQPLLQEIARRYNQPEVTDAVNALLALDPLDNHPTKIPT LPAFYQPSLWTRPVLKANAQSLPDSALLHLGEMLRFPQEEALYPGLLQVKDVCSADSLAG FAWDLFTAWQTAGAPSKESWAFTALGVLGNDDTARKLTPLIRAWPGESQHKRATVGLDIL AAIGSDIALMQLNGIAQKLKFKALQERAKEKIADIAESRELTVAELEDRLAPDLGLDDNG SLLLDFGPRQFTVSFDETLKPFVRDVSGSRLKDLPKPNKSDDESRSNDAVNRYKLLKKDA RTVAAQQVARLESAMCLRRRWSPENFQLFLVEHPLVRHLTRRLIWGVYSAENQLLACFRV AEDNSYSTADDDLFTLPEGDISIGTPHVLEISPTDAAAFGQLFADYELLPPFRQLDRNSY ALTEAERNASELTRWAGRKCPSGRVMGLANKGWIKGEPQDGGWIGWMIKPLGRWSLIMEI DEGFAVGMSPAELSAEQLLSKLWLWEGKAESYGWGSNSTQEAQFSVLDAITASELINDIE ALFE >gi|299857063|gb|ADWS01000001.1| GENE 125 144206 - 147838 2277 1210 aa, chain + ## HITS:1 COG:no KEGG:B21_02004 NR:ns ## KEGG: B21_02004 # Name: yehI # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 1210 1 1210 1210 2310 96.0 0 MDKELPWLADNAQLELKYKKGKTPLSHRKWPGEPVPVITESIIQTLGDELLQKAEKKKNI VWRYENFSLEWQSAITQAINLIGEHKPSIPARTMAALACIAQNDSQQLLDEIVQQEGLEY ATEVVIARQFIARCYESDPLVVTLQYQDEDYGYGYRSETYNEFDLRLRKHLSLAEESCWQ RCADKLIAALPGITKVRRPFIALILPEKPEIANELVGLECPRTHFHSKEWLKVVANDPTA VRKLEHYWSQDIFSDREASYMSHENHFGYAACAALLREQGLAAIPRLAMYAHKEDCGSLL VQINHPQVIRTLLLVADKNKPSLQRVAKYHKNFPHATLAALAELLALTEPPARPGYPIIE DKKLPAQQKARDGYWRTLLQTLMASQPQLAEEMMQWLSTQARAVLNSYLSAPPKPVIDST DNSNLPEILVSPPWRSKKKMTAPRLDLAPLELTPQVYWQPGERERLAATEPARYFSTESL AERMEQKSGRVVLQELGFGDDVWLFLNYILPGKLDAARNSLIVQWHYYQGRVEEILNGWN SPEAQLAEQALRSGHIEALINIWENDNYSRYRPEKSVWNLYLLAQLPREMALTFWLRINE KKHLFAGEDYFLSILGLDALPGLMLAFSHRPKETFPLILNFGATELALPIARVWHRFAGQ RNLARQWILQWPEHTATALIPLIFTKSSDKSEAALLALRLLYEHGHGELLQTVANRWQRT DLWPALEQLLKQSPIEIYPARIPKAPDFWHPQMWSRPRLITNNQPVTDDALEIIGEMLRF TQGGRFYSGLEQLKTFCQPQTLAAFAWDLFTAWQQAGAPVKDNWAFLALSLFGDESTARD LTTQILGWPQEGKSARAVSGLNILTLMNNDMALIQLHHISQRAKSRPLRDNAAEFLQVVA ENRGLSQEELADRLVPTLGLDDPQALSFDFGPRQFTVRFDENLNPVIFDQQNVRQKSVPR LRADDDQLKAPEALARLKGLKKDATQVSKNLLPRLETALRTTRRWSLADFHSLFVNHPFT RLVTQRLIWGAYPANEPRCLLNAFRVAAEGEFCNAQDEPIDLPADALIGIAHPLEMTVEM RSEFAQLFADYEIMPPFRQLARCTVLLTPDESTSNSLTRWEGKSATVGQLMGMRYKGWES GYEDAFVYDLGEYRLVLKFSPGFNHYNVDSKALMSFRSLRVYRDNKSVTFAELDVFDLSE ALSAPDVIFH >gi|299857063|gb|ADWS01000001.1| GENE 126 147899 - 148216 99 105 aa, chain + ## HITS:1 COG:no KEGG:G2583_2655 NR:ns ## KEGG: G2583_2655 # Name: yehK # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 105 1 105 105 192 100.0 4e-48 MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLERFRLHPTFHQRDREDAD PLINDALIYIRDECIDERKLRGESPETVIAIFNRELQNIFNQEIE >gi|299857063|gb|ADWS01000001.1| GENE 127 148326 - 148415 70 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDTLTQKLTVLIAVLELLVALLRLIDLLK >gi|299857063|gb|ADWS01000001.1| GENE 128 149456 - 150544 876 362 aa, chain + ## HITS:1 COG:ECs2927 KEGG:ns NR:ns ## COG: ECs2927 COG0714 # Protein_GI_number: 15832181 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Escherichia coli O157:H7 # 1 362 23 384 384 716 99.0 0 MSPQNNHLQRPPAAVLYADELAKLKQNDNAPCPPGWQLSLPAARAFILGDSAQNISRKVV ISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISGDAGLTIQGGASTTEDQIK YGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITRTPLEVQDCLLGMLSDRVMTV PELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKRRFDFETVFPIMDFAQELELVAS ASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEKKTSMDTLTAIMSTAEAVNVAHAVG VRAWFLANRAGEPADLVDCIAGTIVKDNEEDRARLRRYFEQRVATHKEAHWQAYYQARHR LP >gi|299857063|gb|ADWS01000001.1| GENE 129 150555 - 152834 1619 759 aa, chain + ## HITS:1 COG:no KEGG:c2650 NR:ns ## KEGG: c2650 # Name: yehM # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 759 26 784 784 1398 97.0 0 MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSY CQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDLPCWAQSEEVDDSPDTQEE SQALLLRATRMDNSDTLWDHLFEDESQQTALPSALAHYFAQLRGDSPGDALNRLREAFMA RWIGWAMQQNNGDVLVVCGGWHAPVLAKMWRECPQEINTPELPSLADAVTGCYLTPYSEK RLDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHA MALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGD GFGKLAPSTPQPPLPKDVTCELERTAISLPAELTLNRFNPNGLAQSQVLHRLAILEIPGI VRQQGSTLTLAGNGEERWKLTRPLSQHAALIEAACFGATLQEAARHKLEADMLDAGGIGS ITTCLSQAALAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWRLDEISGMQGAQ ILQTTLCAAIDRTLWLCESNGRPDEKEFHAHLHSWQALCHILRDLHSGVQLPGISLSAAV ALLERRSQAIHAPALDRGAAHGALMRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALA RHQLACQPTFIAGFSSHLNQLSDADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQ LPVSALQMPLHCPPQAIAHHQQLEQQALASLQNWGVFHV >gi|299857063|gb|ADWS01000001.1| GENE 130 152827 - 153963 882 378 aa, chain + ## HITS:1 COG:no KEGG:ECO103_2597 NR:ns ## KEGG: ECO103_2597 # Name: yehP # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 378 1 378 378 737 100.0 0 MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSG GLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRA VLHTKHLMNPEVLAAARQIVRQVVEEIMARLAKEVRQAFSGVRDRRRRSLIPLARNFDFK STLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIHSAVMAAC LWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKS VIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQI AAMTPGELASWLAENLQS >gi|299857063|gb|ADWS01000001.1| GENE 131 153960 - 155960 903 666 aa, chain + ## HITS:1 COG:ECs2931 KEGG:ns NR:ns ## COG: ECs2931 COG2801 # Protein_GI_number: 15832185 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 666 1 667 745 1257 96.0 0 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENGALIATFSDGVRTQLA NSQALKEAQCSCGASGMCRHRVMLVLSYQRLCATVQPTEKEEEWDPAIWLEELATLPDAT RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGQTCRQYVQQLSQALWLGGISQP LIHYEAAFNRALQAAEACNWRWVSESLRQLRASVDAFHTRASHYHAGECLRQLAALNSRL NCAQEMARRDSVGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS LGWDSSRQTLDAQVISGEGEDNLLTLSLPASACSPFAVERMAALLQQTDDPVSLVSGFVS FVDGQLTLEPRVMMTKTRAWALDAETAPVAPLPSASVLPVPSTAHQLLMRCQALLIQLLH NGWRYQEQSAISQAELLANDLSAVGFYRLAHVLGQFRNTESEARVEAMNNGVLLCEQLFP MLQQQG >gi|299857063|gb|ADWS01000001.1| GENE 132 156085 - 156546 536 153 aa, chain + ## HITS:1 COG:ECs2934 KEGG:ns NR:ns ## COG: ECs2934 COG4808 # Protein_GI_number: 15832188 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 153 5 157 157 245 100.0 3e-65 MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETK IQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQG ISGINVSAEDAKKGITMAQMELVMKAAGFKEVK >gi|299857063|gb|ADWS01000001.1| GENE 133 156587 - 157057 440 156 aa, chain - ## HITS:1 COG:ECs2935 KEGG:ns NR:ns ## COG: ECs2935 COG4807 # Protein_GI_number: 15832189 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 300 100.0 7e-82 MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSF LNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTDDILAILTEQQFRVSMPEI TAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS >gi|299857063|gb|ADWS01000001.1| GENE 134 157104 - 157823 877 239 aa, chain - ## HITS:1 COG:ECs2936 KEGG:ns NR:ns ## COG: ECs2936 COG3279 # Protein_GI_number: 15832190 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 239 6 244 244 459 100.0 1e-129 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL >gi|299857063|gb|ADWS01000001.1| GENE 135 157820 - 159505 1212 561 aa, chain - ## HITS:1 COG:yehU KEGG:ns NR:ns ## COG: yehU COG3275 # Protein_GI_number: 16130064 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Escherichia coli K12 # 1 561 1 561 561 1078 100.0 0 MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWF GLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLL GGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMM VTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLY QELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCS LHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQY ERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRP SEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGT SQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGIS VACEPDSYTRITLRLPWRDEA >gi|299857063|gb|ADWS01000001.1| GENE 136 159727 - 160458 574 243 aa, chain + ## HITS:1 COG:yehV KEGG:ns NR:ns ## COG: yehV COG0789 # Protein_GI_number: 16130065 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 243 1 243 243 466 100.0 1e-131 MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNG VQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHL FIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIQDTTRLWL EGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFP LGI >gi|299857063|gb|ADWS01000001.1| GENE 137 160518 - 160625 167 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG >gi|299857063|gb|ADWS01000001.1| GENE 138 160606 - 161337 863 243 aa, chain - ## HITS:1 COG:ECs3015 KEGG:ns NR:ns ## COG: ECs3015 COG1174 # Protein_GI_number: 15832269 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Escherichia coli O157:H7 # 1 243 1 243 243 380 100.0 1e-105 MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGIS SLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIA LILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVI INIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLVQALSQ HAK >gi|299857063|gb|ADWS01000001.1| GENE 139 161342 - 162268 1098 308 aa, chain - ## HITS:1 COG:yehX KEGG:ns NR:ns ## COG: yehX COG1125 # Protein_GI_number: 16130067 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Escherichia coli K12 # 1 308 1 308 308 582 98.0 1e-166 MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEIRF AGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDELMTL LGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQEMTRI HRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPANDFVRQFFGRSEL GVRLLSLRSVADYVRREERAEGEALAEEMTLRDALSLFVARGCEVLPVMNTQGQPCGTLH FQDLLEEA >gi|299857063|gb|ADWS01000001.1| GENE 140 162261 - 163418 1258 385 aa, chain - ## HITS:1 COG:ECs3017 KEGG:ns NR:ns ## COG: ECs3017 COG1174 # Protein_GI_number: 15832271 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Escherichia coli O157:H7 # 1 385 1 385 385 602 99.0 1e-172 MTYLRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQLWPQTIWMLVGFGCAWL TACFIPAKKGSIFALILAQFVFVLLVWGAGKAATQLAQNGSALARTSLGSGFWLAAALAL LACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQH LTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVT AFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRF LHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAGGFGALVFQGLLSSAIDLVLLGVIP VIVLAVLIDALFDLLIALLKVKRND >gi|299857063|gb|ADWS01000001.1| GENE 141 163425 - 164342 1119 305 aa, chain - ## HITS:1 COG:yehZ KEGG:ns NR:ns ## COG: yehZ COG1732 # Protein_GI_number: 16130069 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Escherichia coli K12 # 1 305 1 305 305 560 99.0 1e-159 MPLLKLWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQ LGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQQGYEKVKKLDSEHNKLIW LTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEGGTFKLAASAEFIERADALPAFEK AYGFKLGQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPQGVQ PIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTLQQLNASIAVEGLDAKKVAADYLKQ KGWTK >gi|299857063|gb|ADWS01000001.1| GENE 142 164553 - 166850 2741 765 aa, chain - ## HITS:1 COG:bglX KEGG:ns NR:ns ## COG: bglX COG1472 # Protein_GI_number: 16130070 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli K12 # 1 765 1 765 765 1509 99.0 0 MKWLCSVGIAVSLALQPALADDLFGNHPLTPEARDAFVTELLKKMTVDEKIGQLRLISVG PDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVF PISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYL TSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTA ADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKSGKVTMEELDDAARHVLNVKYDMGLFN DPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKNRLETLPLKKSATIAVVGPLA DSKRDVMGSWSAAGVADQSVTVLTGIKNAVGENGKVLYAKGANVTSDKGIIDFLNQYEEA VKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKA TGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFP RSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSA PTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL >gi|299857063|gb|ADWS01000001.1| GENE 143 167046 - 168761 1613 571 aa, chain + ## HITS:1 COG:ECs3020 KEGG:ns NR:ns ## COG: ECs3020 COG0277 # Protein_GI_number: 15832274 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli O157:H7 # 1 571 1 571 571 1170 99.0 0 MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQGDALAVVFPGSLLELWR VLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTLRLDKLHVLGKGEQVLAYP GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARIN EDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTP ARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANF ENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPH FTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMAGDGVGEAKSWLVDYFKQAEGDFF VCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWYEHLPPEIDSQ LVHKLYYGHFMCYVFHQDYIVKKGVDVHALKEQMLELLQQRGAQYPAEHNVGHLYKAPET LQKFYRENDPTNSMNPGIGKTSKRKNWQEVE >gi|299857063|gb|ADWS01000001.1| GENE 144 168799 - 169689 948 296 aa, chain - ## HITS:1 COG:ECs3021 KEGG:ns NR:ns ## COG: ECs3021 COG1686 # Protein_GI_number: 15832275 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 279 17 295 313 505 100.0 1e-143 MLAVPLAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMT AMVVLDARLPLDEKLKVDISQTPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLA HHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQ LSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPV ALVVMDAFGKYTHFADASRLRTWIETGKVMPVPAAALSYKKQKAAQMAAGQTAQND >gi|299857063|gb|ADWS01000001.1| GENE 145 169902 - 170489 568 195 aa, chain - ## HITS:1 COG:no KEGG:APECO1_4414 NR:ns ## KEGG: APECO1_4414 # Name: yohC # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 195 9 203 203 338 100.0 9e-92 MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTI LKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLS GLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVL LALTVILWGYGYRLF >gi|299857063|gb|ADWS01000001.1| GENE 146 170659 - 171237 617 192 aa, chain + ## HITS:1 COG:ECs3023 KEGG:ns NR:ns ## COG: ECs3023 COG0586 # Protein_GI_number: 15832277 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli O157:H7 # 1 192 13 204 204 333 99.0 1e-91 MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLY LCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPP KIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWL KRRGKKKPDNQA >gi|299857063|gb|ADWS01000001.1| GENE 147 171367 - 172128 200 253 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 57 241 52 238 242 81 30 4e-14 MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLD LGKLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQ IAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNA VAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATYEIASLVAWLCSEGANYTTGQSLIVD GGFMLANPQFNPE >gi|299857063|gb|ADWS01000001.1| GENE 148 172181 - 173617 1143 478 aa, chain - ## HITS:1 COG:ECs3025 KEGG:ns NR:ns ## COG: ECs3025 COG1538 # Protein_GI_number: 15832279 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 1 478 28 505 505 876 99.0 0 MNRDSFYPAIACFPLLLMLAGCAPMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWWL EYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSAE GLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQT RQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDINA SKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRAD LQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPI FDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIERDAL RVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGYKR >gi|299857063|gb|ADWS01000001.1| GENE 149 174297 - 175244 860 315 aa, chain - ## HITS:1 COG:yohI KEGG:ns NR:ns ## COG: yohI COG0042 # Protein_GI_number: 16130078 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Escherichia coli K12 # 1 315 1 315 315 639 99.0 0 MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTP SGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIY QGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEH IDWQAIGEIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYN EPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATGLFQHVRVLNNS PDIARAIQAIDIEKL >gi|299857063|gb|ADWS01000001.1| GENE 150 175483 - 175881 401 132 aa, chain + ## HITS:1 COG:ECs3033 KEGG:ns NR:ns ## COG: ECs3033 COG1380 # Protein_GI_number: 15832287 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Escherichia coli O157:H7 # 1 132 1 132 132 218 100.0 2e-57 MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGMLILFVLLALQILPAKWV NPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAISTLVVFLVVSWSSQLVHG ERKVVGQKGSEE >gi|299857063|gb|ADWS01000001.1| GENE 151 175878 - 176573 737 231 aa, chain + ## HITS:1 COG:yohK KEGG:ns NR:ns ## COG: yohK COG1346 # Protein_GI_number: 16130080 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Escherichia coli K12 # 1 231 1 231 231 383 100.0 1e-106 MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSE VLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIA ASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLA MGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILAVMG >gi|299857063|gb|ADWS01000001.1| GENE 152 176703 - 177587 950 294 aa, chain + ## HITS:1 COG:cdd KEGG:ns NR:ns ## COG: cdd COG0295 # Protein_GI_number: 16130081 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Escherichia coli K12 # 1 294 1 294 294 539 99.0 1e-153 MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSATGLDEDALAFALLPLA AACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALA AITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDYLPDAFGPKDLEIKTLLMDEQ DHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPL QGALILLNLKGYDYPDIQRAVLAENADAPLIQWDATSATLKALGCHSIDRVLLA >gi|299857063|gb|ADWS01000001.1| GENE 153 177737 - 178456 722 239 aa, chain + ## HITS:1 COG:ECs3036 KEGG:ns NR:ns ## COG: ECs3036 COG2949 # Protein_GI_number: 15832290 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 447 100.0 1e-126 MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRTG VINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSDIVLDY AGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI REFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPEDAQGYPAVTPEQLLELQKKQGK >gi|299857063|gb|ADWS01000001.1| GENE 154 178459 - 178698 230 79 aa, chain + ## HITS:1 COG:no KEGG:G2583_2688 NR:ns ## KEGG: G2583_2688 # Name: yeiS # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 79 1 79 79 135 100.0 6e-31 MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVYVWRAKNPGLFFAYMVA YIGFGILSIGMIVYLIFYR >gi|299857063|gb|ADWS01000001.1| GENE 155 179017 - 180255 1039 412 aa, chain + ## HITS:1 COG:yeiT KEGG:ns NR:ns ## COG: yeiT COG0493 # Protein_GI_number: 16130084 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 1 412 1 412 412 810 98.0 0 MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAA ETIRENNALGAVCARVCPTEKLCQSGCTRAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPG TKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPGGWLRNGIPQFRLPQSVLDAE IARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVGLSSGSGLSLFEHSDVEIAVDFL QRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFAS ARELGVSIIDGFTPVAVEGNKVTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQR NTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAEAIHHYLEGACSC >gi|299857063|gb|ADWS01000001.1| GENE 156 180249 - 181484 1110 411 aa, chain + ## HITS:1 COG:yeiA_1 KEGG:ns NR:ns ## COG: yeiA_1 COG0167 # Protein_GI_number: 16130085 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Escherichia coli K12 # 1 326 3 328 328 682 99.0 0 MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPR FDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGENEQQWEELA RLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIG DMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALR FIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGL SHYLADQGFDSLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQ AMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIELGEVKFKKGEKEHPVTL >gi|299857063|gb|ADWS01000001.1| GENE 157 181555 - 182565 1373 336 aa, chain - ## HITS:1 COG:mglC KEGG:ns NR:ns ## COG: mglC COG4211 # Protein_GI_number: 16130086 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Escherichia coli K12 # 1 336 1 336 336 486 100.0 1e-137 MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVA GLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIG LINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFVALGS FRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGV FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVIN YGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYARKK >gi|299857063|gb|ADWS01000001.1| GENE 158 182581 - 184101 193 506 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 279 482 17 215 245 79 26 2e-13 MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLF GIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMF VDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSL TEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDK IIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGA KRTDIVETLFGIREKSAGTITLHGKQINNHNANEAINHGFALVTEERRSTGIYAYLDISF NSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRW LLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMS NGLVSGIVDTKTTTQNEILRLASLHL >gi|299857063|gb|ADWS01000001.1| GENE 159 184162 - 185160 1395 332 aa, chain - ## HITS:1 COG:mglB KEGG:ns NR:ns ## COG: mglB COG1879 # Protein_GI_number: 16130088 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 332 1 332 332 586 99.0 1e-167 MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLL MNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRK ALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEA RTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMG AVEALKAHNKSSIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGKG AADGTNWKIENKVVRVPYVGVDKDNLAEFSKK >gi|299857063|gb|ADWS01000001.1| GENE 160 185440 - 186480 988 346 aa, chain - ## HITS:1 COG:ECs3043 KEGG:ns NR:ns ## COG: ECs3043 COG1609 # Protein_GI_number: 15832297 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 346 1 346 346 660 99.0 0 MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELDYRPNANAQALATQVSD TIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCNALI VHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDNLSGARMATRMLLNNCHQRIG YLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGTPDMPGGEAAMVELLGRNLQLTA VFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIPIARYTDPQLTTVRYPIASMAKLAT ELALQGAAGNIDPRASHCFMPTLVRRHSVATRQNAATITNSTNQAM >gi|299857063|gb|ADWS01000001.1| GENE 161 186622 - 187779 1084 385 aa, chain - ## HITS:1 COG:Z3408 KEGG:ns NR:ns ## COG: Z3408 COG2311 # Protein_GI_number: 15802708 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 EDL933 # 1 385 44 428 428 664 98.0 0 MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPQDAWTWAFLDLIAQVK FLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWR LVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGV DAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAI GVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLA IACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFR QGPVEWLWRQLTLRAAGTAISKTSR >gi|299857063|gb|ADWS01000001.1| GENE 162 187796 - 188464 799 222 aa, chain - ## HITS:1 COG:ECs3045 KEGG:ns NR:ns ## COG: ECs3045 COG0302 # Protein_GI_number: 15832299 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 412 100.0 1e-115 MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHMTEIMQLLNLDLADDSL METPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTVRDITLTSTCEHHFVTIDG KATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTNNVAVSIDAVH YCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAVRHHN >gi|299857063|gb|ADWS01000001.1| GENE 163 188722 - 189558 772 278 aa, chain + ## HITS:1 COG:yeiG KEGG:ns NR:ns ## COG: yeiG COG0627 # Protein_GI_number: 16130092 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli K12 # 1 278 1 278 278 553 99.0 1e-157 MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFT IKAGAQRVAAELGIVLVMPDTSPRGEQVANDDGYDLGQGAGFYLNATQPPWATHYRMYDY LRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWG IKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAAR QKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK >gi|299857063|gb|ADWS01000001.1| GENE 164 189590 - 191581 1966 663 aa, chain - ## HITS:1 COG:cirA KEGG:ns NR:ns ## COG: cirA COG4771 # Protein_GI_number: 16130093 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Escherichia coli K12 # 1 663 1 663 663 1314 99.0 0 MFRLNPFVRVGLCLSAISCAWPVLAVDDDGETMVVTASSVEQNLKDAPASISVITQEDLQ RKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLILVDGKRVNSRNAVFRHNDF DLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTTIQEHRDR GDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRIEGFSSRDGNVE FAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLERQNYSVSHNGRWDYGTSELKYYGEKVE NKNPGNSSPITSESNAVDGKYTLPLTAINQFLTVGGEWRHDKLSDAVNLTGGTSSKTSAS QYALFVEDEWRIFEPLALTTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKA PSLLQLSPDWTSNSCRGACKIVGSPDLKPETSESWELGLYYMGEEGWLEGVESSVTVFRN DVKDRISISRTSDVNAAPGYQNFVGFETGANGRRIPVFSYYNVNKARIQGVETELKIPFN DEWKLSINYTYNDGRDVSNGENKPLSDLPFHTANGTLDWKPLALEDWSFYVSGHYTGQKR ADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVD YRF >gi|299857063|gb|ADWS01000001.1| GENE 165 191874 - 193343 1832 489 aa, chain - ## HITS:1 COG:lysP KEGG:ns NR:ns ## COG: lysP COG0833 # Protein_GI_number: 16130094 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 489 1 489 489 911 100.0 0 MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGL MVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLV MSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVGVLMIIG IFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPR AVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVM NAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCF LTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDINDLPYRSGFFPLG PIFAFILCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFVRYSE MKFPQNDKK >gi|299857063|gb|ADWS01000001.1| GENE 166 193548 - 194429 204 293 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 3 241 1 243 305 83 26 1e-14 MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN EHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPI ELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLARGPVTL EQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRR VIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYCDPANVPR >gi|299857063|gb|ADWS01000001.1| GENE 167 194528 - 195577 1188 349 aa, chain + ## HITS:1 COG:ECs3050 KEGG:ns NR:ns ## COG: ECs3050 COG2855 # Protein_GI_number: 15832304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 573 100.0 1e-163 MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNT IYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLAC FLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAIFL YPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDAENAAVISKMLRVMMLAPF LILLAARVKQLSGANSGEKSKITIPWFAILFIVVAIFNSFHLLPQSVVNMLVTLDTFLLA MAMAALGLTTHVSALKKAGAKPLLMALVLFAWLIVGGGAINYVIQSVIA >gi|299857063|gb|ADWS01000001.1| GENE 168 195651 - 196508 961 285 aa, chain + ## HITS:1 COG:ECs3051 KEGG:ns NR:ns ## COG: ECs3051 COG0648 # Protein_GI_number: 15832305 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Escherichia coli O157:H7 # 1 285 1 285 285 580 99.0 1e-165 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT CHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA >gi|299857063|gb|ADWS01000001.1| GENE 169 196512 - 197600 750 362 aa, chain + ## HITS:1 COG:yeiI_2 KEGG:ns NR:ns ## COG: yeiI_2 COG0524 # Protein_GI_number: 16130098 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 54 362 1 309 309 560 85.0 1e-159 MNDREKQILKILRRNPLIQQNEIADILQISRSRVAAHIMDLMRKGLIKGKGYILTEQDYC VVVGAINMDIRGMADIRYPQAASHPGSVHCSAGGVGRNIAHNLALLGRDVHLISAIGNDF YGETLLEETRRAGVNVSNCIRLHGHSTATYLAIANKQEETILAINDTHILQQLTPQLLNT SRDLIRHAGVVLADCNLTPEALEWVFTIADEIPMFVDTVSEFKANKVKNWYSRIHTLKPT QNELEILWGQPIKDDNDRIRAVNSLHQQGVKRIFVYLKDESVFCSDKDGEQFLLTAPAHT TVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVP MV >gi|299857063|gb|ADWS01000001.1| GENE 170 197656 - 198906 1356 416 aa, chain - ## HITS:1 COG:yeiJ KEGG:ns NR:ns ## COG: yeiJ COG1972 # Protein_GI_number: 16130099 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli K12 # 1 416 1 416 416 650 99.0 0 MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVA FGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGV MGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSG MASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETP PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFAHASLESILGY LLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTGGTLDAKTVAIISFAL CGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA >gi|299857063|gb|ADWS01000001.1| GENE 171 199006 - 199947 1042 313 aa, chain - ## HITS:1 COG:yeiK KEGG:ns NR:ns ## COG: yeiK COG1957 # Protein_GI_number: 16130100 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli K12 # 1 313 1 313 313 632 100.0 0 MEKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEIN VPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDIT LVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTS GVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWG LVEECVRGYIKTH >gi|299857063|gb|ADWS01000001.1| GENE 172 200077 - 200775 439 232 aa, chain + ## HITS:1 COG:ECs3055 KEGG:ns NR:ns ## COG: ECs3055 COG0664 # Protein_GI_number: 15832309 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 14 232 1 219 219 442 99.0 1e-124 MKEIHNNDLKQQLMSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRA RLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPRLLN DTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLG VSYRHLLYVLAQFIHDGLLTKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ >gi|299857063|gb|ADWS01000001.1| GENE 173 200846 - 202096 1371 416 aa, chain - ## HITS:1 COG:yeiM KEGG:ns NR:ns ## COG: yeiM COG1972 # Protein_GI_number: 16130102 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli K12 # 1 416 1 416 416 630 98.0 1e-180 MDIMRSVVGMVVLLAIAFVLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAA LGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGV MGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRMNRNELFTAICSG MASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFARILSPATEPSQVTFENLSFSETP PKSIIEAAANGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFANVSLESIFGY VLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTSGTLDVKTIAIISFAL CGFANFGSIGVVVGAFSAISPKRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA >gi|299857063|gb|ADWS01000001.1| GENE 174 202190 - 203128 993 312 aa, chain - ## HITS:1 COG:ECs3057 KEGG:ns NR:ns ## COG: ECs3057 COG2313 # Protein_GI_number: 15832311 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme involved in pigment biosynthesis # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 551 96.0 1e-157 MSELTLSPELLQISAEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGA VPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIA ALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLET FGVPLIGYQTKALPAFFCRTSPFEVSIRLDSAREIARAMAVKWQTGLNGGLVVANPIPEQ FAMPEETINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILA SEIAKEYQRLVG >gi|299857063|gb|ADWS01000001.1| GENE 175 203116 - 204057 432 313 aa, chain - ## HITS:1 COG:ECs3058 KEGG:ns NR:ns ## COG: ECs3058 COG0524 # Protein_GI_number: 15832312 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 313 1 313 313 569 88.0 1e-162 MREKDYIVIIGSANIDVAGYSHHPLNYADSNPGKIKFTPGGVGRNIAHNLALLGKNAWLL SAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMSISDCI SAEFLAQHQEFIRGAKVIVADCNLSEEALVWVLENSGETPVFIDPVSAWKCVKIRDHLSK IHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDINGESGW SAPIKTNVINVTGAGDAMMAGLASCWVDGMPFIDSVRFAQGCSSMALACEYTNNPELSIA NVRSLVENTECLN >gi|299857063|gb|ADWS01000001.1| GENE 176 204514 - 206205 2041 563 aa, chain - ## HITS:1 COG:fruA_3 KEGG:ns NR:ns ## COG: fruA_3 COG1299 # Protein_GI_number: 16130105 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 226 563 1 338 338 542 98.0 1e-154 MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMAIVLGDSIPNDSALNGK NVWQGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVDASGPKRVVAVTACPTGVAHTF MAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIVAADIEVDLAKFAGKPM YRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTEGKKESAGAYRHLLTGVSYMLPM VVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLT PGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLISTQLKLPQSMEALKPILIIPLISSLVV GLAMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVG LLSTQTYGPMAAIMAAGMVPPLAMGLATMVARRKFDKAQQEGGKAALVLGLCFISEGAIP FAARDPMRVLPCCIVGGALTGAISMAIGAKLMAPHGGLFVLLIPGAITPVLGYLVAIIAG TLVAGLAYAFLKRPETQIVEKNA >gi|299857063|gb|ADWS01000001.1| GENE 177 206222 - 207160 991 312 aa, chain - ## HITS:1 COG:ECs3060 KEGG:ns NR:ns ## COG: ECs3060 COG1105 # Protein_GI_number: 15832314 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 611 100.0 1e-175 MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGG FLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDFNFSGFEVTPADWER FVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAA PWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIA KPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRPQLA AMMARVDLQPFN >gi|299857063|gb|ADWS01000001.1| GENE 178 207160 - 208290 1321 376 aa, chain - ## HITS:1 COG:fruB_1 KEGG:ns NR:ns ## COG: fruB_1 COG4668 # Protein_GI_number: 16130107 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Escherichia coli K12 # 1 286 1 286 286 471 100.0 1e-132 MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGMLAREQQTSTFLGNGIAI PHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDD SVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIVASDLLTLQALNAARLKEAGA VDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVSRAANAFDVDGETAAMLVSVAMN DDQPIAVLKRLADLLLDNKADRLLKADAATLLALLTSDDAPTDDVLSAEFVVRNEHGLHA RPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQA LKAIGDAIAAGLGEGA >gi|299857063|gb|ADWS01000001.1| GENE 179 208658 - 209839 967 393 aa, chain + ## HITS:1 COG:ECs3062 KEGG:ns NR:ns ## COG: ECs3062 COG0477 # Protein_GI_number: 15832316 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 694 99.0 0 MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGS AVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGS TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAA VAFIVCGVMVWLFLPSMQKELPLATGTVEAPRRNRRDTLLLFVICTLMWGSNSLYIINMP LFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVGGVCFYAGML MAHSPVILLGLQLLNAIFIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSVA GIVAEIWNYHAVFWFAMVMIIATLFCLLRIKDV >gi|299857063|gb|ADWS01000001.1| GENE 180 209836 - 210090 170 84 aa, chain - ## HITS:1 COG:YPO1286 KEGG:ns NR:ns ## COG: YPO1286 COG0727 # Protein_GI_number: 16121569 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Yersinia pestis # 1 84 1 84 84 100 66.0 5e-22 MKCRPGCGACCTAPSISSPIPGMPDGKPANTPCIQLDEQQRCKIFTSPLRPKVCAGLQAS AEMCGNSRQQAMTWLIDLEMLTAP >gi|299857063|gb|ADWS01000001.1| GENE 181 210245 - 210817 814 190 aa, chain + ## HITS:1 COG:ECs3063 KEGG:ns NR:ns ## COG: ECs3063 COG0231 # Protein_GI_number: 15832317 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 # 1 190 86 275 275 384 100.0 1e-107 MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDD IVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTW DGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSPGEKIRIHI EERRYMGRAD >gi|299857063|gb|ADWS01000001.1| GENE 182 211040 - 212506 1243 488 aa, chain + ## HITS:1 COG:yeiQ KEGG:ns NR:ns ## COG: yeiQ COG0246 # Protein_GI_number: 16130110 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli K12 # 1 488 1 488 488 1008 99.0 0 MKTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLTDRVLNAQGGDWGICEI SLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLNAKLDSLAAIIEKFCEPQV AIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHSAPGILVEALKRRRERGLTPF TVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHVSFPGTMVDRIVPAATDESLVEI SQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVAGVQMVNDVLPWEEMKLRMLNGSHS FLAYLGYLSGFAHISDCMQDRAFRHAARTLMLDEQAPTLQIKDVDLTQYADKLIARFANP ALKHKTWQIAMDGSQKLPQRMLAGIRIHLGRETDWSLLALGVAGWMRYVSGVDDAGNAID VRDPLSDKIRELVAGSSSEQRVTALLSLREVFGDDLPDNPHFVQAIEQAWQQIVQFGAHQ ALLNTLKI >gi|299857063|gb|ADWS01000001.1| GENE 183 212624 - 213610 691 328 aa, chain + ## HITS:1 COG:yeiR KEGG:ns NR:ns ## COG: yeiR COG0523 # Protein_GI_number: 16130111 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Escherichia coli K12 # 1 328 1 328 328 654 99.0 0 MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIP GGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATL CILDPRLLLDEKSASNGNFRDQLAAADIIVANKSDRATPESEQALQRWWQQNGGDRQLIH SEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGYQA CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDS RIELISSSEADWNALQSALLKLRLATTA >gi|299857063|gb|ADWS01000001.1| GENE 184 213649 - 214362 446 237 aa, chain + ## HITS:1 COG:ECs3066 KEGG:ns NR:ns ## COG: ECs3066 COG0671 # Protein_GI_number: 15832320 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 237 13 249 249 436 99.0 1e-122 MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTN NRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIMGLVMLLTAVVLNQLGQALIPVKRASP TLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFVVF AFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK >gi|299857063|gb|ADWS01000001.1| GENE 185 214774 - 215340 358 188 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 65 184 58 174 175 142 57 2e-32 MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVGSETSSLQASQDEFENL VRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEM GKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNE ARRVLSRS >gi|299857063|gb|ADWS01000001.1| GENE 186 215521 - 217077 1014 518 aa, chain + ## HITS:1 COG:rtn_2 KEGG:ns NR:ns ## COG: rtn_2 COG2200 # Protein_GI_number: 16130114 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 261 518 1 258 258 531 100.0 1e-150 MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLIIDVQKYLDTYFAD LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW >gi|299857063|gb|ADWS01000001.1| GENE 187 217153 - 218973 1340 606 aa, chain + ## HITS:1 COG:yejA KEGG:ns NR:ns ## COG: yejA COG4166 # Protein_GI_number: 16130115 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 606 1 606 606 1192 99.0 0 MQMIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITL SALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVA INPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKE DMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRITSWKMGQNIVYSRVKDYWAANLP VNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDE QKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEY AARNYPEAAELVLLAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLK GQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRD YDMMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLP LGRALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPS ARQQGE >gi|299857063|gb|ADWS01000001.1| GENE 188 218974 - 220068 1461 364 aa, chain + ## HITS:1 COG:ECs3070 KEGG:ns NR:ns ## COG: ECs3070 COG4174 # Protein_GI_number: 15832324 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 364 1 364 364 684 99.0 0 MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGIRA SHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLF RSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAI PAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQQITDYLWHITLPVLATVIGGF AALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFT GSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRID FEGR >gi|299857063|gb|ADWS01000001.1| GENE 189 220068 - 221093 985 341 aa, chain + ## HITS:1 COG:ECs3071 KEGG:ns NR:ns ## COG: ECs3071 COG4239 # Protein_GI_number: 15832325 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 649 99.0 0 MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLL KNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGATSINFATDKPFPSPPSRQ NWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFI EVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQA LGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQG KNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNKAV >gi|299857063|gb|ADWS01000001.1| GENE 190 221095 - 222684 333 529 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 268 528 1 261 563 132 33 1e-29 MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLP SPPVEYLSGDIRFHGESLLHVSDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLS LHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIA DEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNY AATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNV VVKNISFTLRAGETLGLVGESGSGKSTTGLALLRLINSQGSIIFDGQPLQNLNRRQLLPI RHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMHEVGLDPETRH RYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYL FISHDLHVVRALCHQVIVLRQGEVVEQGPCARVFATPQQEYTRQLLALS >gi|299857063|gb|ADWS01000001.1| GENE 191 222688 - 223032 238 114 aa, chain - ## HITS:1 COG:no KEGG:EC55989_2435 NR:ns ## KEGG: EC55989_2435 # Name: yejG # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 114 1 114 114 233 100.0 2e-60 MTSLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGPCGDNSLVALKLLSPDGDNAWSVMYK LSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGVAIAEPFSNYNPF >gi|299857063|gb|ADWS01000001.1| GENE 192 223365 - 224555 1222 396 aa, chain - ## HITS:1 COG:ECs3074 KEGG:ns NR:ns ## COG: ECs3074 COG0477 # Protein_GI_number: 15832328 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 653 99.0 0 MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFAL GQLIYGPMADSFGRKPVVLGGTLVFAAATVACALANTIDQLIVMRFFHGLAAAAASVVIN ALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILASAM IFFLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVY IEINHVAPENFGYYFALNIVFLFVMTIFNSRFVRRIGALNMFRSGLWIQFIMAAWMVISA LLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGAL LSLATFNSAWPMIWSIAFCATSSILFCLYASRPKKR >gi|299857063|gb|ADWS01000001.1| GENE 193 224583 - 225278 761 231 aa, chain - ## HITS:1 COG:ECs3075 KEGG:ns NR:ns ## COG: ECs3075 COG1187 # Protein_GI_number: 15832329 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 469 100.0 1e-132 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV >gi|299857063|gb|ADWS01000001.1| GENE 194 225144 - 225401 99 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|466200|sp|P28247|BICB_ECOLI ## NR: gi|466200|sp|P28247|BICB_ECOLI RecName: Full=Putative uncharacterized protein BicB # 1 85 83 167 167 179 97.0 4e-44 MFRKQFERCITDDFAIDGDTIAADFTPGNSTANAELLCDKFIKSHVCDFACKNGGRALTR KSELLSAQYSGLITSLKGKRTVAYY >gi|299857063|gb|ADWS01000001.1| GENE 195 225427 - 227187 1648 586 aa, chain + ## HITS:1 COG:ZyejH_1 KEGG:ns NR:ns ## COG: ZyejH_1 COG1061 # Protein_GI_number: 15802740 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Escherichia coli O157:H7 EDL933 # 1 358 1 358 358 728 99.0 0 MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE LVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECH RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD CIYELPLRYMIKHSYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH IISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIEDFKAQR FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMS LQHEHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITA ADILAQQALLRHPDFVVARMKGQYWQLREKVFDYEGRFRRAHELRG >gi|299857063|gb|ADWS01000001.1| GENE 196 227216 - 227596 633 126 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|26108973|gb|AAN81176.1|AE016763_135 50S ribosomal protein L25 [Escherichia coli CFT073] # 1 126 1 126 126 248 96 2e-64 MSIESRPLLHTQSRSLTCCWVACSRINLREKEMFTINAEVRKEQGKGASRRLRAANKFPA IIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQH IDFVRA >gi|299857063|gb|ADWS01000001.1| GENE 197 227735 - 228742 1179 335 aa, chain - ## HITS:1 COG:ECs3078 KEGG:ns NR:ns ## COG: ECs3078 COG3081 # Protein_GI_number: 15832332 # Func_class: R General function prediction only # Function: Nucleoid-associated protein # Organism: Escherichia coli O157:H7 # 1 335 1 335 335 642 100.0 0 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN >gi|299857063|gb|ADWS01000001.1| GENE 198 228924 - 229151 299 75 aa, chain + ## HITS:1 COG:ECs3079 KEGG:ns NR:ns ## COG: ECs3079 COG3082 # Protein_GI_number: 15832333 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 120 100.0 8e-28 MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLINTSIAPAQRQAIANS FARALQSSINEDKAH >gi|299857063|gb|ADWS01000001.1| GENE 199 229171 - 230931 1664 586 aa, chain + ## HITS:1 COG:ECs3080 KEGG:ns NR:ns ## COG: ECs3080 COG3083 # Protein_GI_number: 15832334 # Func_class: R General function prediction only # Function: Predicted hydrolase of alkaline phosphatase superfamily # Organism: Escherichia coli O157:H7 # 1 586 1 586 586 1170 99.0 0 MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGH FSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVW QLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKLRSLTRRRRFARPLAAFLFIA FIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPD AVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGN TTDNGIFGLFYGISPSYMDGILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLS DFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFNGTNIDDSNQQAFARKYSRAA GNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEDEETFDWSHGHLQVPLVIHWPGT PAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITT PKKTLVLNNNGKYRTYNLRGERVKDEKPQLSLLLQVLTDEKRFIAN >gi|299857063|gb|ADWS01000001.1| GENE 200 231186 - 231398 107 70 aa, chain - ## HITS:1 COG:ECs3081 KEGG:ns NR:ns ## COG: ECs3081 COG3468 # Protein_GI_number: 15832335 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 1 70 767 836 836 131 98.0 2e-31 MRQEYADSNQVKVNDDGKFNNDVAGTRGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPW NTQAGVVWTF >gi|299857063|gb|ADWS01000001.1| GENE 201 231411 - 233696 1444 761 aa, chain - ## HITS:1 COG:yejO KEGG:ns NR:ns ## COG: yejO COG3468 # Protein_GI_number: 16130127 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 1 761 1 761 836 1300 96.0 0 MASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGVSSNTEIKGGYQYIEM NGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGAANDPTIKGGRLIVEKDGITVLAA IEKGGLLEVKEGGLAIAVDQKAGGAIKASTRVMEAFGTNRLGQFEIKNGIANNMLLENGG SLRVEENDFAYNTTVDSGGLLEVMDGGTVTGVDKKAGGKLIVSTNALEVSGTNSKGQFSI KDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTKVQANAVYDLGRSDQN GSITYSSKAISENMVINNGRANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVV SEGASFRTHGAVDTSKADVSLENSVWTIIADITTTNQNTLLNLANLAMSDANVIMMDEPV TRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGAS PAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTD VLNMAAAQPLVFDAELDTVRERLGSVKGVNYDTAMWSSAINTRNNVTTDAGAGFEQTLTG LTLGIDSRFSREETSTIRGLFFGYSHSDIGFDRGGKGNVDSYTLGAYAGWEHQNGAYVDG VVKVDRFANTIHCKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDG QDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEP >gi|299857063|gb|ADWS01000001.1| GENE 202 234097 - 234744 860 215 aa, chain + ## HITS:1 COG:ECs3082 KEGG:ns NR:ns ## COG: ECs3082 COG2197 # Protein_GI_number: 15832336 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 385 99.0 1e-107 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANRLDIDVILLDL NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ >gi|299857063|gb|ADWS01000001.1| GENE 203 234779 - 235831 1225 350 aa, chain - ## HITS:1 COG:ccmH_2 KEGG:ns NR:ns ## COG: ccmH_2 COG4235 # Protein_GI_number: 16130131 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli K12 # 130 350 1 221 221 423 98.0 1e-118 MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIAT DLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIY ARSRRRVRVVPEAFPEQSVPEGKRAGYVAYLPGIVVALIVAGVSYYQTGNYQQVKIWQQA TAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIDGWIMLGRVGMALGNASI ATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRTDHSNIRVLSMYA FNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIERSIAQAMQHLSLQESK >gi|299857063|gb|ADWS01000001.1| GENE 204 235828 - 236385 664 185 aa, chain - ## HITS:1 COG:ECs3084 KEGG:ns NR:ns ## COG: ECs3084 COG0526 # Protein_GI_number: 15832338 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 377 99.0 1e-105 MKRKVLLIPLIIFLAIAAALLWQLARNVEGDDPTNLESALIGKPVPKFRLESLDNPGQFY QADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELG NPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYS KEAAQ >gi|299857063|gb|ADWS01000001.1| GENE 205 236382 - 238325 2167 647 aa, chain - ## HITS:1 COG:ccmF KEGG:ns NR:ns ## COG: ccmF COG1138 # Protein_GI_number: 16130133 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli K12 # 1 647 1 647 647 1143 99.0 0 MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAWLLFMSVAGAFLVLVNA FVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLD IVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRDLNPLLQDPGLIFHPPLLYMG YVGFSVAFAFAIASLLCGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLLGTFLVRSGVLV SVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRESLLLANNVLLV AAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVGPLVRWGRDRPR KIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLGLAMACWIAVLAIAEAALRISRGTKT TFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPN WRGGVATIGVTRDGKPETVLYAEKRYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAW AVRLYYKPFVRWIWAGGLMMALGGLLCLFDPRYRKRVSPQKTAPEAV >gi|299857063|gb|ADWS01000001.1| GENE 206 238322 - 238801 622 159 aa, chain - ## HITS:1 COG:ECs3086 KEGG:ns NR:ns ## COG: ECs3086 COG2332 # Protein_GI_number: 15832340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c-type biogenesis protein CcmE # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 320 99.0 7e-88 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYQGILPDLFREGQGVVVQGELEKGNH ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS >gi|299857063|gb|ADWS01000001.1| GENE 207 238798 - 239007 266 69 aa, chain - ## HITS:1 COG:ECs3087 KEGG:ns NR:ns ## COG: ECs3087 COG3114 # Protein_GI_number: 15832341 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Heme exporter protein D # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 90 100.0 7e-19 MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARL RAAQQQEAA >gi|299857063|gb|ADWS01000001.1| GENE 208 239004 - 239741 767 245 aa, chain - ## HITS:1 COG:ECs3088 KEGG:ns NR:ns ## COG: ECs3088 COG0755 # Protein_GI_number: 15832342 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 417 100.0 1e-116 MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFAPADYQQGNSYRIIYLH VPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAVFTFIALVTGSAWGKPMWG TWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAGILVLIGVVNLPIIHYSVEWW NTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTLMRMRNLILLMEKRRPWVSELIL KRGRK >gi|299857063|gb|ADWS01000001.1| GENE 209 239783 - 240442 668 219 aa, chain - ## HITS:1 COG:ECs3089 KEGG:ns NR:ns ## COG: ECs3089 COG2386 # Protein_GI_number: 15832343 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Escherichia coli O157:H7 # 1 219 2 220 220 280 100.0 2e-75 MFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQLLARIAPGIIWVAALLS SLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWMVTGLPLLILSPLVAMLLGM DVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVLLSILVLPLTIPLLIFATAAMD AASMHLPVDGYLAILGALLAGTATLSPFATAAALRISIQ >gi|299857063|gb|ADWS01000001.1| GENE 210 240417 - 241064 554 215 aa, chain - ## HITS:1 COG:ccmA KEGG:ns NR:ns ## COG: ccmA COG4133 # Protein_GI_number: 16130138 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, ATPase component # Organism: Escherichia coli K12 # 3 204 1 202 205 372 99.0 1e-103 MGMLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEV LWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDGDAAQCLEALAQAGLAG FEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGI VILTTHQPLNVAESKIRRISLTQTGPHDVLAHFPS >gi|299857063|gb|ADWS01000001.1| GENE 211 241077 - 241679 552 200 aa, chain - ## HITS:1 COG:ECs3091 KEGG:ns NR:ns ## COG: ECs3091 COG3005 # Protein_GI_number: 15832345 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Escherichia coli O157:H7 # 1 200 1 200 200 429 100.0 1e-120 MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISC HEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDT PQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTAQKSVAAKMHDQAVKDGQTCI DCHKGIAHKLPDMREVEPGF >gi|299857063|gb|ADWS01000001.1| GENE 212 241689 - 242159 464 156 aa, chain - ## HITS:1 COG:ECs3092 KEGG:ns NR:ns ## COG: ECs3092 COG3043 # Protein_GI_number: 15832346 # Func_class: C Energy production and conversion # Function: Nitrate reductase cytochrome c-type subunit # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 318 99.0 3e-87 MEFGSEIMKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQ ERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVG AEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK >gi|299857063|gb|ADWS01000001.1| GENE 213 242135 - 242998 648 287 aa, chain - ## HITS:1 COG:napH KEGG:ns NR:ns ## COG: napH COG0348 # Protein_GI_number: 16130141 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Escherichia coli K12 # 1 287 1 287 287 548 99.0 1e-156 MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPWFGVWILHGNYSSSLLF DTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKRLFCSWVCPLNPITDLANW LRRRFDLNQSATIPRHIRYVLLVVILLGSALTGTLIWEWINPVSLMGRSLVMGFGSGALL ILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITVAATDRQKCNRCMDCFHVCPEPH VLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFTITTRWSSGAKS >gi|299857063|gb|ADWS01000001.1| GENE 214 242985 - 243680 458 231 aa, chain - ## HITS:1 COG:napG KEGG:ns NR:ns ## COG: napG COG1145 # Protein_GI_number: 16130142 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli K12 # 1 231 1 231 231 449 100.0 1e-126 MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASA CVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREI ESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPT VHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS >gi|299857063|gb|ADWS01000001.1| GENE 215 243687 - 246173 3226 828 aa, chain - ## HITS:1 COG:napA KEGG:ns NR:ns ## COG: napA COG0243 # Protein_GI_number: 16130143 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 828 1 828 828 1722 99.0 0 MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQ QGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLLRMKNGKYDKEGEFTPITW DQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAASKLFKAGFRSNNIDPNARHCM ASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAEMHPILWSRITNRRLSNQNVTVA VLSTYQHRSFELADNGIIFTPQSDLVILNYIANYIIQNNAINQDFFSKHVNLRKGATDIG YGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVAEYTLEKTAEMTGVPKDQLEQLAQLYA DPNKKVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREV GTFAHRLPADMVVTNEKHRDICEKKWNIPSGTIPAKIGLHAVAQDRALKDGKLNVYWTMC TNNMQAGPNINEERMPGWRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAER RTQFWRQQVQAPGEAKSDLWQLVQFSRRFKTEEVWPEELLAKKPELRGKTLYEVLYATPE VSKFPVSELAEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPV VNGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGR VLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETR GRNRPPQGLVYMPFFDAAQLVNKLTLDATDPLSKETDFKKCAVKLEKV >gi|299857063|gb|ADWS01000001.1| GENE 216 246170 - 246433 323 87 aa, chain - ## HITS:1 COG:ECs3096 KEGG:ns NR:ns ## COG: ECs3096 COG3062 # Protein_GI_number: 15832350 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in formation of periplasmic nitrate reductase # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 139 100.0 2e-33 MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTI ESVRNVEGVLAVSLVYHQQEEQGEETP >gi|299857063|gb|ADWS01000001.1| GENE 217 247325 - 247813 527 162 aa, chain + ## HITS:1 COG:eco KEGG:ns NR:ns ## COG: eco COG4574 # Protein_GI_number: 16130146 # Func_class: R General function prediction only # Function: Serine protease inhibitor ecotin # Organism: Escherichia coli K12 # 1 162 1 162 162 320 99.0 9e-88 MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQVIQLTPQEDESTLKVEL LIGQTLEVDCNLHRLGGKLESKTLEGWGYDYYVFDKVSSPVSTMMACPDGKKEKKFVTAY LGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAVVR >gi|299857063|gb|ADWS01000001.1| GENE 218 247962 - 249608 1853 548 aa, chain - ## HITS:1 COG:ECs3099 KEGG:ns NR:ns ## COG: ECs3099 COG0579 # Protein_GI_number: 15832353 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli O157:H7 # 1 548 1 548 548 1074 99.0 0 MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSATLGTYLRELEPEWSMT MVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISIEKAVAINEAFQISRQFWA HQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAALQQSSLFRGMRYSEDHAQIKE WAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIASLQKKSNFSLQLSSEVRALKRND DNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLLQESGIPEAKDYAGFPVGGQFLVSE NPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLDGKRVVLFGPFATFSTKFLKNGSLWDL MSSTTTSNVMPMMHVGLDNFDLVKYLVSQVMLSEEDRFEALKEYYPQAKKEDWRLWQAGQ RVQIIKRDAEKGGVLRLGTEVVSDQQGTIAALLGASPGASTAAPIMLDLLEKVFGDRVSS PQWQATLKAIVPSYGRKLNGDVAATERELQYTSEVLGLKYDKPQAADSTPKPQLKPQPVQ KEVADIAL >gi|299857063|gb|ADWS01000001.1| GENE 219 249826 - 251469 195 547 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 326 541 133 357 398 79 30 1e-13 MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTSLLVLPEFLGLLLL LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLAGLTSDVRNITI AFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAITIWGGFVLVARVYKHMATLRE TEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDAQEYRHHIIRADTFHLSAVNWSN IMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLTAQVAFNKLN KFALAPFKAEFPRPQAFPNWQTLELRNVTFSYQDNAFSVGPINLTIKRGELLFLIGGNGS GKSTLAMLLTGLYQPQSGEILLDGKPVSGEQPEDYRKLFSAVFTDVWLFDQLLGPEGKPA NPQLVEKWLAQLKMAHKLELSNGRIVNLKLSKGQKKRVALLLALAEERDIILLDEWAADQ DPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEERDAASR DAVARTA >gi|299857063|gb|ADWS01000001.1| GENE 220 251545 - 252192 529 215 aa, chain - ## HITS:1 COG:ECs3101 KEGG:ns NR:ns ## COG: ECs3101 COG3145 # Protein_GI_number: 15832355 # Func_class: L Replication, recombination and repair # Function: Alkylated DNA repair protein # Organism: Escherichia coli O157:H7 # 1 215 2 216 216 441 98.0 1e-124 MDLFADAEPWQEPLAAGAVILHRFAFNAAEQLIRDINNVASQSPFRQMVTPGGYTMSVAM TNCGHLGWTSHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINR YAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGE SRLFYHGIQPLKAGFHPLTTDCRYNLTFRQAGKKE >gi|299857063|gb|ADWS01000001.1| GENE 221 252195 - 253259 633 354 aa, chain - ## HITS:1 COG:Zada_1 KEGG:ns NR:ns ## COG: Zada_1 COG2169 # Protein_GI_number: 15802766 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Escherichia coli O157:H7 EDL933 # 1 184 1 184 184 360 98.0 3e-99 MKNATCLTDDQRWQSVLARDPNADSEFVFAVRTTGIFCRPSCRARHALRENVSFYANACE ALAAGFRPCKRCQPDKANAQQHRLDKITHACRLLEQETPVTLEALADQVAMSPFHLHRLF KATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFPDSSSYYRKADETLGMTAKQF RHGGENLAVRYALADCALGRCLVAESERGICAILLGDDDATLISELQQMFPAADNAPADL MFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKP KAVRAVASACAANKLAIIIPCHRVVRGDGTLSGYRWGVSRKAQLLRREAENEER >gi|299857063|gb|ADWS01000001.1| GENE 222 253333 - 254388 1130 351 aa, chain - ## HITS:1 COG:ECs3103 KEGG:ns NR:ns ## COG: ECs3103 COG1477 # Protein_GI_number: 15832357 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Escherichia coli O157:H7 # 1 351 1 351 351 695 99.0 0 MEISFTRVALLAAALFFVGCDQKPQTAKTHATEVTVLEGKTMGTFWRASIPGIDAKRSAE LKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEAMADIVTTSLRIGARTDGA MDITVGPLVNLWGFGPEQQPVQIPSQEQIDAMKAKTGLQHLTVINQSHQQYLQKDLPDLY VDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSRGMNGEGLPWRVAIQKPTDKENA VQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQTGRPIEHNLVSVTVIAPTALEADA WDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSFKTWMSPQFKSFLVSEKN >gi|299857063|gb|ADWS01000001.1| GENE 223 254500 - 255591 1387 363 aa, chain - ## HITS:1 COG:ECs3104 KEGG:ns NR:ns ## COG: ECs3104 COG3203 # Protein_GI_number: 15832358 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 363 1 367 367 628 98.0 1e-180 MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLG FKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLKFQDVGSFDYGRNYGVVYD VTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGSVSGE GMTNNGREALRQNGDGVGGSITYDYEGFGIGAAVSSSKRTDDQNSPLYIGNGDRAETYTG GLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGK NLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLV YQF >gi|299857063|gb|ADWS01000001.1| GENE 224 256330 - 259002 2566 890 aa, chain + ## HITS:1 COG:yojN_1 KEGG:ns NR:ns ## COG: yojN_1 COG0642 # Protein_GI_number: 16130153 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 700 1 700 700 1280 99.0 0 MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAI QKRVDNWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDNS TLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLISTLPLKDLTSGFKESTVSDIVD SRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIP PGMPLDSFRLEPDATATGNNDNEKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGT LLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRSTESLPSTAVNNELRILRAINEEI VSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNITTMAEQHQGIIQATINNELYEIR MFRSQVAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRMTFMKNIGDALKEPAQSL AESAAKLNAPESKQLANQADVLVRLVDEIQLANMLADDSWKSETVLFSVQDLIDEVVPSV LPAIKRKGLQLLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESS EDRLTFRILDTGEGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNI KTRDGLGTRYSVHIKMLAADPEVEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATC ITPDERLISQDYDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVL QLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQT AHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL >gi|299857063|gb|ADWS01000001.1| GENE 225 259019 - 259669 817 216 aa, chain + ## HITS:1 COG:ECs3106 KEGG:ns NR:ns ## COG: ECs3106 COG2197 # Protein_GI_number: 15832360 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 400 100.0 1e-111 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD >gi|299857063|gb|ADWS01000001.1| GENE 226 259869 - 262718 1938 949 aa, chain - ## HITS:1 COG:rcsC_1 KEGG:ns NR:ns ## COG: rcsC_1 COG0642 # Protein_GI_number: 16130155 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 17 716 1 700 700 1439 100.0 0 MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQ RFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAFEPLFADSDCSAMSNTWRG SLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVERDTALKALHERINK YRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANRLQALLGVEQTIRMENFFLPGTL PMGVTILDENGHTLISLTGPESKIKGDPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIV YSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNR KIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDVLTSN NTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKSMFLATVSHE LRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEP REFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKF TDTGCIVLHVRADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAI CEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQ FLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGE WVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLL ADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVI GVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES >gi|299857063|gb|ADWS01000001.1| GENE 227 262993 - 263769 500 258 aa, chain - ## HITS:1 COG:ECs3108 KEGG:ns NR:ns ## COG: ECs3108 COG4676 # Protein_GI_number: 15832362 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 514 99.0 1e-146 MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADD QNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRVESDGSFARPYIFTEGSNSVQVISP DGQSRQKMQFYSMPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGA LDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETF IVPMRNAGELTLVKSFDW >gi|299857063|gb|ADWS01000001.1| GENE 228 263774 - 265423 1081 549 aa, chain - ## HITS:1 COG:yfaQ KEGG:ns NR:ns ## COG: yfaQ COG5445 # Protein_GI_number: 16130163 # Func_class: S Function unknown # Function: Predicted secreted protein # Organism: Escherichia coli K12 # 1 549 1 549 549 1080 99.0 0 MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGS LWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHI GADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEA KIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATV LNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVKPGVLNGRYRVTFTNGNHITF VSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANQ EGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQAT AQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQGETGYN EPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIE TLTRQLLMD >gi|299857063|gb|ADWS01000001.1| GENE 229 265424 - 270028 3833 1534 aa, chain - ## HITS:1 COG:ECs3111 KEGG:ns NR:ns ## COG: ECs3111 COG2373 # Protein_GI_number: 15832365 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Escherichia coli O157:H7 # 1 1534 1 1534 1534 2974 98.0 0 MDTQRFQSQFHWHLSFKFSGAIAACLSLSLVGTGLANADDSLPSSNYAPPAGGTFFLLAD SSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQY LGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELHLGNAIIKPSRYVQNNQ FSPLKKYPLVEQFRYPLWQAKPVEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLV EAMVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGV TDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRV DVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQIVNVTLDARNGGQGSFRLPENAVA GGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVK DARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTV SASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWL RLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSYAVSGKGSTAHTGTV DIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQY EARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVE LTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQA LSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWR ITARGMNGGGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVT KFAGAEMRQALTLHKGANYISLAQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVE QQKNVMLGGGENALMLPEQASNIRLQSSETPQEIFRNNLDALVDGPWGGVINTGSRLIPL SLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYAD WQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAI ARRGTKDEDFSEEDIRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQY AWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPP VVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKMAQQSNI PVTVERQLYRLIPGEEEMSFILQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLP PGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQ KGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK >gi|299857063|gb|ADWS01000001.1| GENE 230 269962 - 270585 215 207 aa, chain - ## HITS:1 COG:ECs3112 KEGG:ns NR:ns ## COG: ECs3112 COG3234 # Protein_GI_number: 15832366 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 207 10 216 216 422 99.0 1e-118 MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVR FAANETLKVHDSKWLKSNGFSSQYLPPEMTLTPGQRQLAQNWNQGNGKTGPYVTAINLIQ YNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLM TWKDTRWIPNDSNPNFIGIYRLNFLAR >gi|299857063|gb|ADWS01000001.1| GENE 231 270582 - 272270 1284 562 aa, chain - ## HITS:1 COG:yfaA KEGG:ns NR:ns ## COG: yfaA COG4685 # Protein_GI_number: 16130165 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 562 17 578 578 1113 98.0 0 MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDL FLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKL FSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKI NSETVPVYQLRYNGNNALMFATYQNKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRW QASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDES ASVDTSFDFTPVWNSMPAGASFCVVVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWY ADSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPISQTQQGEAQIWRRE VSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKNRPAMV DVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYV MKLAQMEPGAAWQWLPITWQPL >gi|299857063|gb|ADWS01000001.1| GENE 232 272419 - 275046 3251 875 aa, chain - ## HITS:1 COG:gyrA KEGG:ns NR:ns ## COG: gyrA COG0188 # Protein_GI_number: 16130166 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Escherichia coli K12 # 1 875 1 875 875 1657 99.0 0 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN KAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV AAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE LLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVV VTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVY SMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVL TEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTG VRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERN GLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVA EPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE >gi|299857063|gb|ADWS01000001.1| GENE 233 275193 - 275915 818 240 aa, chain + ## HITS:1 COG:ubiG KEGG:ns NR:ns ## COG: ubiG COG2227 # Protein_GI_number: 16130167 # Func_class: H Coenzyme transport and metabolism # Function: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase # Organism: Escherichia coli K12 # 1 240 1 240 240 500 100.0 1e-142 MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKV LDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHA GQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRM VPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK >gi|299857063|gb|ADWS01000001.1| GENE 234 275976 - 279470 2882 1164 aa, chain - ## HITS:1 COG:yfaL_2 KEGG:ns NR:ns ## COG: yfaL_2 COG3468 # Protein_GI_number: 16130168 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 725 1164 1 446 446 713 93.0 0 MQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGG AIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSY SDGDGGAIDVTDNNSDSKHPSGYTIINNTAFTNNTAEGYGGAIYTNSATAPYLIDISVDD SYSQNGGVLVDENNSAAGYGDGPSTAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVD SIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCY GLTIGSIDKYQNQAELNVGSTQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAG QLTIAQNGSYVLSGAQSMALTGDIVVDDGAVLSLEGDAADLAALQDDPQSIVLNGGVLDL SDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQ VSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITANVDTRSTT TEHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTFTKTGAGTLELTASGTTQ SAVRVEEGTLKGDVADIFPYASSLWVGDGATFVTGADQDIQSIDATSSGTIDISDGTVLR LTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSDVTVNGNLTNTSG AVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITG IGEPTSTGIKVVDFAADPTQFQNNAKFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTP PLPPDPDPDPTPDPDPTPDPIPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGNGQT LNLRVIGGRYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGDDGEWMLGAVGGYSDNQGESR SNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGTDHYHS SGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLH SEWRTAVGVTPTLDLNYYHDPHATEIEEDGSTISDDAVKRRGEIKVGVTGNISQRVSLRG SVAWQKGSDDFAQTAGFLSMTVKW >gi|299857063|gb|ADWS01000001.1| GENE 235 280406 - 282691 2847 761 aa, chain + ## HITS:1 COG:nrdA KEGG:ns NR:ns ## COG: nrdA COG0209 # Protein_GI_number: 16130169 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Escherichia coli K12 # 1 761 1 761 761 1579 99.0 0 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEE LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGVRYSDGSANNLT HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI >gi|299857063|gb|ADWS01000001.1| GENE 236 282780 - 283910 1494 376 aa, chain + ## HITS:1 COG:ECs3118 KEGG:ns NR:ns ## COG: ECs3118 COG0208 # Protein_GI_number: 15832372 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Escherichia coli O157:H7 # 1 376 1 376 376 757 99.0 0 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG QIDAEVDTDDLSNFQL >gi|299857063|gb|ADWS01000001.1| GENE 237 283910 - 284164 211 84 aa, chain + ## HITS:1 COG:yfaE KEGG:ns NR:ns ## COG: yfaE COG0633 # Protein_GI_number: 16130171 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli K12 # 1 84 1 84 84 159 100.0 9e-40 MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEP LAFIQPGEILPCCCRAKGDIEIEM >gi|299857063|gb|ADWS01000001.1| GENE 238 284218 - 284868 541 216 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_2315 NR:ns ## KEGG: ECIAI1_2315 # Name: inaA # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 216 1 216 216 432 99.0 1e-120 MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYP FGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQH AVLPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRR LRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM >gi|299857063|gb|ADWS01000001.1| GENE 239 285083 - 285289 210 68 aa, chain + ## HITS:1 COG:ECs3122 KEGG:ns NR:ns ## COG: ECs3122 COG0583 # Protein_GI_number: 15832376 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 68 225 292 292 116 88.0 1e-26 MKFIRQGLGIALQPELTLKSIAGELCSVPHEPTFYRQISLLAKEKPVEGSPLFLLQTCTE QLVVNGKI >gi|299857063|gb|ADWS01000001.1| GENE 240 285331 - 286407 1130 358 aa, chain - ## HITS:1 COG:ECs3124 KEGG:ns NR:ns ## COG: ECs3124 COG0584 # Protein_GI_number: 15832378 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Escherichia coli O157:H7 # 1 358 1 358 358 716 99.0 0 MKLKLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGAD YLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEG FDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQ EGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMDLNLVQLIAYTD WNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMV QDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE >gi|299857063|gb|ADWS01000001.1| GENE 241 286412 - 287770 1519 452 aa, chain - ## HITS:1 COG:glpT KEGG:ns NR:ns ## COG: glpT COG2271 # Protein_GI_number: 16130175 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli K12 # 1 452 1 452 452 882 99.0 0 MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGF SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSI AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGM AWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELT AKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFFYEY AGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFL IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVM IGGSILAVILLIVVMIGEKRRHEQLLQKRNGG >gi|299857063|gb|ADWS01000001.1| GENE 242 288043 - 289671 1775 542 aa, chain + ## HITS:1 COG:ECs3126 KEGG:ns NR:ns ## COG: ECs3126 COG0578 # Protein_GI_number: 15832380 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 542 1 542 542 1051 100.0 0 MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARY AVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEA IDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIRE GATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRI NQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAP VMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRL MAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTP AWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAA GLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKD AL >gi|299857063|gb|ADWS01000001.1| GENE 243 289661 - 290920 977 419 aa, chain + ## HITS:1 COG:glpB KEGG:ns NR:ns ## COG: glpB COG3075 # Protein_GI_number: 16130177 # Func_class: E Amino acid transport and metabolism # Function: Anaerobic glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli K12 # 1 419 1 419 419 804 99.0 0 MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDI HSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLR ATWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLR NNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLP CSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADI PLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGV TTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ >gi|299857063|gb|ADWS01000001.1| GENE 244 290917 - 292107 1059 396 aa, chain + ## HITS:1 COG:ECs3128 KEGG:ns NR:ns ## COG: ECs3128 COG0247 # Protein_GI_number: 15832382 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 828 99.0 0 MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCK RCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKP VRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGK DLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIAT SSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCH MEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEES GADLVITDCETCKWQIEMSTSLRCEHPITLLAQALA >gi|299857063|gb|ADWS01000001.1| GENE 245 292301 - 293203 678 300 aa, chain + ## HITS:1 COG:ECs3129 KEGG:ns NR:ns ## COG: ECs3129 COG5464 # Protein_GI_number: 15832383 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 300 1 308 308 580 96.0 1e-165 MTESTTSSPHDAVFKTFMFTPETAGDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAY YSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPL LFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQ KHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQK ERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH >gi|299857063|gb|ADWS01000001.1| GENE 246 293244 - 293633 375 129 aa, chain - ## HITS:1 COG:yfaU KEGG:ns NR:ns ## COG: yfaU COG3836 # Protein_GI_number: 16130180 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Escherichia coli K12 # 1 129 139 267 267 257 100.0 3e-69 MAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRI IETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGK NGPRIKGSY >gi|299857063|gb|ADWS01000001.1| GENE 247 293769 - 294971 1083 400 aa, chain - ## HITS:1 COG:yfaY KEGG:ns NR:ns ## COG: yfaY COG1058 # Protein_GI_number: 16130184 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Escherichia coli K12 # 1 400 1 400 400 794 99.0 0 MLKVEMLSTGDEVLHGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDDLVTILRERSQH ADVLIVNGGLGPTSDDLSALAAATAKGEGMVLHEAWLKEMERYFHERGRVMAPSNRKQAE LPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVMVEHEILPRLRERFSLPQPPV CLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPIIELKLTGPASEQQAMEKLWLDVK RVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQFTGGLLALQLSRAGAPLLACEVVPS QEETLAQTAHWITERRANHFAGLALAVSGFENEHLNFALATPDGTFALRVRFSTTRYSLA IRQEVCAMMALNMLRRWLNGQDIASEHGWIEVIESMTLSV >gi|299857063|gb|ADWS01000001.1| GENE 248 295071 - 295613 666 180 aa, chain - ## HITS:1 COG:no KEGG:B21_02135 NR:ns ## KEGG: B21_02135 # Name: yfaZ # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 180 1 180 180 274 99.0 1e-72 MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGD VAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYS PDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGKDGNRDNAVADGPYVGVNASF >gi|299857063|gb|ADWS01000001.1| GENE 249 295892 - 296317 417 141 aa, chain + ## HITS:1 COG:yfaO KEGG:ns NR:ns ## COG: yfaO COG0494 # Protein_GI_number: 16130186 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli K12 # 1 141 1 141 141 281 97.0 4e-76 MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWALSGGGVESGERIEEALRREIREELGE QLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSANREVKINEEFQDYAWVKPE DLVHYDLNVTTRKTLRLKGLL >gi|299857063|gb|ADWS01000001.1| GENE 250 296356 - 296958 188 200 aa, chain - ## HITS:1 COG:no KEGG:SFV_2322 NR:ns ## KEGG: SFV_2322 # Name: ais # Def: protein induced by aluminum # Organism: S.flexneri_8401 # Pathway: not_defined # 1 200 20 219 219 381 98.0 1e-105 MLAFCRSSLKSKKYFIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFR HAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSA GKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNHCLTYIAKNKRDATFKPDYLD GLVMHVEKGKVYLDGEFVNH >gi|299857063|gb|ADWS01000001.1| GENE 251 297248 - 298405 889 385 aa, chain + ## HITS:1 COG:yfbE KEGG:ns NR:ns ## COG: yfbE COG0399 # Protein_GI_number: 16130188 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 385 6 390 390 748 98.0 0 MAEGKAMSEFLPFSRPAMGVEELAAVKEVLESGWLTTGPKNQALEQAFCQLTGNQHAIAV SSATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAI ESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTA IFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGY KYNLTDINAAIALTQLAKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFI IRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICS LPLFPDMTTADADRVITALQQLAGQ >gi|299857063|gb|ADWS01000001.1| GENE 252 298409 - 299377 832 322 aa, chain + ## HITS:1 COG:yfbF KEGG:ns NR:ns ## COG: yfbF COG0463 # Protein_GI_number: 16130189 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 322 1 322 322 658 100.0 0 MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVE ASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEG YDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHER STFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTTPLRMLSLLG SIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYT DVRARPRYFVQQVIRPSSKENE >gi|299857063|gb|ADWS01000001.1| GENE 253 299377 - 301359 1561 660 aa, chain + ## HITS:1 COG:yfbG_2 KEGG:ns NR:ns ## COG: yfbG_2 COG0451 # Protein_GI_number: 16130190 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 306 660 1 355 355 767 100.0 0 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYATD DVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAPLNWV LVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAI KHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKF TVWSSRVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQ GSRLNSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHP HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC VKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGF RVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS >gi|299857063|gb|ADWS01000001.1| GENE 254 301356 - 302246 785 296 aa, chain + ## HITS:1 COG:yfbH KEGG:ns NR:ns ## COG: yfbH COG0726 # Protein_GI_number: 16130191 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli K12 # 1 296 1 296 296 613 100.0 1e-175 MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWK MLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNW DRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFR PLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCA YQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR >gi|299857063|gb|ADWS01000001.1| GENE 255 302246 - 303898 1355 550 aa, chain + ## HITS:1 COG:yfbI KEGG:ns NR:ns ## COG: yfbI COG1807 # Protein_GI_number: 16130192 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Escherichia coli K12 # 1 550 1 550 550 1044 99.0 0 MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLASGDWIVPHLLGLRYFE KPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFTLRLWRDKRLALLATVIYL SLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKGKSAGFLLLGITCGMGVMTKG FLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLTVLPWGLAISQREPDFWHYFFWV EHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLPGALYTGWKNRKHSATVYLLSWTIM PLLFFSVAKGKLPTYILSCFASLAMLMAHYALLAAKNNPLALRINGWINIAFGVTGIIAT FVVSPWGPMNTPVWQTFESYKVFCAWSIFSLWAFFGWYTLTNVEKTWPFAALCPLGLALL VGFSIPDRVMEGKHPQFFVEMTQESLQPSRYILTDSVGVAAGLAWSLQRDDIIMYRQTGE LKYGLNYPDAKGRFVSGDEFANWLNQHRQEGIITLVLSVDRDEDINSLAIPPADAIDRQE RLVLIQYRPK >gi|299857063|gb|ADWS01000001.1| GENE 256 303895 - 304230 347 111 aa, chain + ## HITS:1 COG:Z3516 KEGG:ns NR:ns ## COG: Z3516 COG0697 # Protein_GI_number: 15802807 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 111 1 111 111 157 99.0 5e-39 MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLALACLGLAMVLWLLVLQN VPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGSTV >gi|299857063|gb|ADWS01000001.1| GENE 257 304230 - 304448 262 72 aa, chain + ## HITS:1 COG:ECs3146 KEGG:ns NR:ns ## COG: ECs3146 COG0697 # Protein_GI_number: 15832400 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 62 95 156 222 94 100.0 7e-20 MGLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLS VFVGIKRYINLR >gi|299857063|gb|ADWS01000001.1| GENE 258 304328 - 304615 159 95 aa, chain + ## HITS:1 COG:yfbJ KEGG:ns NR:ns ## COG: yfbJ COG0697 # Protein_GI_number: 16130193 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 29 95 156 222 222 125 100.0 2e-29 MGFYRGSVSFWPGCPDTVTRAAGLSAFRFCWYKTLHKLALSKAYALLSMSYVLVWIASMV LPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY >gi|299857063|gb|ADWS01000001.1| GENE 259 304609 - 304875 184 88 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_2602 NR:ns ## KEGG: ECUMN_2602 # Name: pmrD # Def: polymyxin resistance protein B # Organism: E.coli_UMN026 # Pathway: not_defined # 1 88 1 88 88 172 100.0 3e-42 MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREK LHTVKVLSASSYSPDEWERQCTAAGKTQ >gi|299857063|gb|ADWS01000001.1| GENE 260 304985 - 306340 1185 451 aa, chain - ## HITS:1 COG:menE KEGG:ns NR:ns ## COG: menE COG0318 # Protein_GI_number: 16130195 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli K12 # 1 451 1 451 451 847 98.0 0 MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELASGFAAQGVVEGSGVMLRAW NTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQFALVPDGENTFPALTSLHI QRVEGAHAATWQPTRLCSMTLTSGSTGLPKAAVHTYQAHLASAEGVLSLIPFGDHDDWLL SLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGCTHASLVPTQLWRLLVNRSSVSL KAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFASTVCAKEADGLADVGSPLPGREVKI VNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYATRDRGEMHNGKLTIVGRLDNLFFSGGE GIQPEEVERVIAAHPAVLQVFIVPVADKEFGHRPVAVVEYDQQTVDLGEWVKDKLARFQQ PVRWLTLPPELKNGGIKISRQALKEWVQRQQ >gi|299857063|gb|ADWS01000001.1| GENE 261 306337 - 307299 983 320 aa, chain - ## HITS:1 COG:ECs3149 KEGG:ns NR:ns ## COG: ECs3149 COG1441 # Protein_GI_number: 15832403 # Func_class: H Coenzyme transport and metabolism # Function: O-succinylbenzoate synthase # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 623 99.0 1e-178 MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGEISPLPGFSQETWEEAQ SVLLAWVNNWLAGDCELPQMPSVAFGVSCALAELADTLPQAANYRAAPLCNGDPDDLILK LADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQFAKYVNT DYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLREPDFAFVAEEGVRAVVIKPTLTG SLEKVREQVQAAHALGLTAVISSSIESSLGLTQLARIAAWLTPDTIPGLDTLDLMQAQQV RRWPGSTLPVVEVDALERLL >gi|299857063|gb|ADWS01000001.1| GENE 262 307299 - 308156 937 285 aa, chain - ## HITS:1 COG:ECs3150 KEGG:ns NR:ns ## COG: ECs3150 COG0447 # Protein_GI_number: 15832404 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Escherichia coli O157:H7 # 1 285 1 285 285 602 100.0 1e-172 MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQAL ADARYDDNVGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPK PVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKA REIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP >gi|299857063|gb|ADWS01000001.1| GENE 263 308171 - 308929 542 252 aa, chain - ## HITS:1 COG:yfbB KEGG:ns NR:ns ## COG: yfbB COG0596 # Protein_GI_number: 16130198 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 252 1 252 252 510 98.0 1e-144 MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLYVDLPGHGGSAAISVDG FDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQ RAERQRSDRQWAQRFCTEPLTAVFADWYQQPVFASLNDDQRRELVVLRSNNNGATLAAML EATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAELAADCHVIPRAGHNAHRENPA GVIASLAQILRF >gi|299857063|gb|ADWS01000001.1| GENE 264 308926 - 310380 1364 484 aa, chain - ## HITS:1 COG:menD KEGG:ns NR:ns ## COG: menD COG1165 # Protein_GI_number: 16130199 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Escherichia coli K12 # 1 484 73 556 556 964 99.0 0 MAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTH SISLPRPTRDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDW WQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDV LSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDI EGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQL AHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRAS GKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMP QNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQ VSHL >gi|299857063|gb|ADWS01000001.1| GENE 265 310838 - 311980 832 380 aa, chain - ## HITS:1 COG:menF KEGG:ns NR:ns ## COG: menF COG1169 # Protein_GI_number: 16130200 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Escherichia coli K12 # 76 380 1 305 356 593 99.0 1e-169 MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWLASQQTYPQFYWQQRNG DEEAAVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDPSQGNLLLPRLEWRRCGGK ATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTTTREQHWPDKTGWTQLIELAT KTIAEGELDKVVLARATDLYFASPVNAAAMMAASRRLNLNCYHFYMAFDGENAFLGSSPE RLWRRRDKALRTEALAGTVANNPDDKQAQQLGEWLMADDKNQRENMLVVEDICQRLQADT QTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVICLHQLQPTAAVAGLPRDLARQFIARH EPFTREWYAGSAGYLSLQQS >gi|299857063|gb|ADWS01000001.1| GENE 266 312059 - 312364 490 101 aa, chain - ## HITS:1 COG:ECs3154 KEGG:ns NR:ns ## COG: ECs3154 COG4575 # Protein_GI_number: 15832408 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 84 1 84 101 146 100.0 8e-36 MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAEKALDDVKKRVSQASDS YYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR >gi|299857063|gb|ADWS01000001.1| GENE 267 312419 - 312880 503 153 aa, chain - ## HITS:1 COG:elaA KEGG:ns NR:ns ## COG: elaA COG2153 # Protein_GI_number: 16130202 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli K12 # 1 153 1 153 153 314 99.0 4e-86 MIEWQDLHHSKLSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDLTGDNRHILGWKNDELV AYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLETCTHHWPDKPVYLGAQAHL QNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA >gi|299857063|gb|ADWS01000001.1| GENE 268 312945 - 313862 556 305 aa, chain + ## HITS:1 COG:elaC KEGG:ns NR:ns ## COG: elaC COG1234 # Protein_GI_number: 16130203 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Escherichia coli K12 # 1 305 7 311 311 627 100.0 1e-179 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKI FISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVE IGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKA GKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITME AKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPATELANDF TVFNV >gi|299857063|gb|ADWS01000001.1| GENE 269 314053 - 314808 346 251 aa, chain + ## HITS:1 COG:no KEGG:ECO26_3260 NR:ns ## KEGG: ECO26_3260 # Name: elaD # Def: deubiquitinase # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 246 2 247 406 465 99.0 1e-130 MVTVVSNYCQLSQTQLSQTFAEKFTVTEELLQSLKKTALSGDEESIELLHNIALGYDEFG KKAEDILYHIVRNPTNETLSIIRLIKNACLKLYNLAHTATNSHLKPTGPDTSDVLLFKKL FSPSKLMTIIGDEIPLISEKQSLSKVLLNDENNELSDDTNFWDKNRQLTTDEIACYLQKI AANAKNTQVNYPTGLYVPYSTRTHLEDALNENIKSDPSWPNEVQLFPINTGGHWILVSLQ KIVNKKIINYK >gi|299857063|gb|ADWS01000001.1| GENE 270 314898 - 315269 202 123 aa, chain + ## HITS:1 COG:no KEGG:ECO26_3260 NR:ns ## KEGG: ECO26_3260 # Name: elaD # Def: deubiquitinase # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 123 284 406 406 242 100.0 4e-63 MGEMSNNNIKVHLNEPEIIFLHADLQQYLSQSCGAFVCMAAQEVIEQRESNSDSAPYTLL KNYADRFKKYSAEEQYEIDFQHRLVNRNCYLDKYGDARINASYTQLEIKHSQPKNRASGK RVS >gi|299857063|gb|ADWS01000001.1| GENE 271 316390 - 316893 582 167 aa, chain + ## HITS:1 COG:no KEGG:SDY_2471 NR:ns ## KEGG: SDY_2471 # Name: yfbM # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 167 1 167 167 322 100.0 4e-87 MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFD PAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRSELRKQFSIKRLNEM EIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG >gi|299857063|gb|ADWS01000001.1| GENE 272 316960 - 318417 1919 485 aa, chain - ## HITS:1 COG:ECs3160 KEGG:ns NR:ns ## COG: ECs3160 COG1007 # Protein_GI_number: 15832414 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Escherichia coli O157:H7 # 61 485 1 425 425 707 100.0 0 MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIGLNAALVSLWFVGQAGA MDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLA NANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQ SGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVST FLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGY SSISHLGYLLVALIALQTGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLF SYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQAHLWWLVGAVVVGSAI GLYYYLRVAVSLYLHAPEQPGRDAPSNWQYSAGGIVVLISALLVLVLGVWPQPLISIVRL AMPLM >gi|299857063|gb|ADWS01000001.1| GENE 273 318424 - 319953 1700 509 aa, chain - ## HITS:1 COG:ECs3161 KEGG:ns NR:ns ## COG: ECs3161 COG1008 # Protein_GI_number: 15832415 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Escherichia coli O157:H7 # 1 509 1 509 509 889 100.0 0 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF YPQPILDTSHSAIGNIQQWFVNSVTTTRP >gi|299857063|gb|ADWS01000001.1| GENE 274 320117 - 321958 2185 613 aa, chain - ## HITS:1 COG:ECs3162 KEGG:ns NR:ns ## COG: ECs3162 COG1009 # Protein_GI_number: 15832416 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Escherichia coli O157:H7 # 1 613 1 613 613 1050 99.0 0 MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQAY SQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYT NLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVF LAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLA DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALV QTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQ NIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLV GAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLP QTTELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTLVTSIANSAPGRLLSTWWYNAWG FDWLYDKVFVKPFLGIAWLLKRDPLNSMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSI GAVVVLALLMVLR >gi|299857063|gb|ADWS01000001.1| GENE 275 321955 - 322257 471 100 aa, chain - ## HITS:1 COG:ECs3163 KEGG:ns NR:ns ## COG: ECs3163 COG0713 # Protein_GI_number: 15832417 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Escherichia coli O157:H7 # 1 100 1 100 100 148 100.0 3e-36 MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASALAFVVAGSYWGQTDGQV MYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG >gi|299857063|gb|ADWS01000001.1| GENE 276 322254 - 322808 746 184 aa, chain - ## HITS:1 COG:ECs3164 KEGG:ns NR:ns ## COG: ECs3164 COG0839 # Protein_GI_number: 15832418 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Escherichia coli O157:H7 # 1 184 1 184 184 317 100.0 7e-87 MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYA GAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQGID GTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAGEVLSNRKDDSAKRKT EEHA >gi|299857063|gb|ADWS01000001.1| GENE 277 322820 - 323362 687 180 aa, chain - ## HITS:1 COG:ECs3165 KEGG:ns NR:ns ## COG: ECs3165 COG1143 # Protein_GI_number: 15832419 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Escherichia coli O157:H7 # 1 180 1 180 180 371 100.0 1e-103 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP >gi|299857063|gb|ADWS01000001.1| GENE 278 323377 - 324354 1192 325 aa, chain - ## HITS:1 COG:ECs3166 KEGG:ns NR:ns ## COG: ECs3166 COG1005 # Protein_GI_number: 15832420 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Escherichia coli O157:H7 # 1 325 1 325 325 593 100.0 1e-169 MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQL VADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFL MMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIV NSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG EYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSF GWKICLPLTLINLLVTAAVILWQAQ >gi|299857063|gb|ADWS01000001.1| GENE 279 324351 - 327077 3024 908 aa, chain - ## HITS:1 COG:ECs3167 KEGG:ns NR:ns ## COG: ECs3167 COG1034 # Protein_GI_number: 15832421 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Escherichia coli O157:H7 # 1 908 3 910 910 1893 99.0 0 MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTR GRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVM TGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYYKDYADGTDLGVYGAHDNVY FGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWDMQFAPSICQQCSIGCNISPG ERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDFITLNAEQAMQ GAADILRQSKKVIGIGSPRASVESNFALRELVGEENFYTGIAHGEQERLQLALKVLREGG IYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAVKGKAREMAAAQKVADWQIAAILN IGQRAKHPLFVTNVDDTRLDDIAAWTYRAPVEDQARLGFAIAHALDNSAPAVDGIEPELQ SKIDVIVQALAGAKKPLIISGTNAGSIEVIQAAANVAKALKGRGADVGITMIARSVNSMG LGIMGGGSLEEALTELETGRADAVVVLENDLHRHASATRVNAALAKAPLVMVVDHQRTAI MENAHLVLSAASFAESDGTVINNEGRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLL SREVDWTQLDHVIDAVVAKIPELAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANIS VHEPRQPQDIDTMFTFSMEGNNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGD PGVRLFETSENGLDYFTSVPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYI KLNPADAAKLGVNAGTHVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHL EDLKEAQQ >gi|299857063|gb|ADWS01000001.1| GENE 280 327130 - 328467 1436 445 aa, chain - ## HITS:1 COG:ECs3168 KEGG:ns NR:ns ## COG: ECs3168 COG1894 # Protein_GI_number: 15832422 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Escherichia coli O157:H7 # 1 445 1 445 445 925 100.0 0 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC GEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNNVETLCNVPAILANGVEWYQNIS KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE AGIKQPFSNTHLINGIQPNLLKERW >gi|299857063|gb|ADWS01000001.1| GENE 281 328464 - 328964 492 166 aa, chain - ## HITS:1 COG:nuoE KEGG:ns NR:ns ## COG: nuoE COG1905 # Protein_GI_number: 16130220 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Escherichia coli K12 # 1 166 1 166 166 340 100.0 8e-94 MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIAD VLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQT TFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPELLERYK >gi|299857063|gb|ADWS01000001.1| GENE 282 328967 - 330757 2125 596 aa, chain - ## HITS:1 COG:nuoC_2 KEGG:ns NR:ns ## COG: nuoC_2 COG0649 # Protein_GI_number: 16130221 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Escherichia coli K12 # 198 596 1 399 399 843 99.0 0 MTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFL KKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHV PTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE LTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVD CVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVN VIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFR IGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGT TGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQC LNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGIN SYYLTSDGSTMSYRTRIRTPSYAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR >gi|299857063|gb|ADWS01000001.1| GENE 283 330863 - 331525 651 220 aa, chain - ## HITS:1 COG:ECs3171 KEGG:ns NR:ns ## COG: ECs3171 COG0377 # Protein_GI_number: 15832425 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 # 1 220 1 220 220 457 100.0 1e-129 MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEP KWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER RPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI >gi|299857063|gb|ADWS01000001.1| GENE 284 331541 - 331978 452 145 aa, chain - ## HITS:1 COG:ECs3172 KEGG:ns NR:ns ## COG: ECs3172 COG0838 # Protein_GI_number: 15832426 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 3 (chain A) # Organism: Escherichia coli O157:H7 # 1 145 3 147 147 266 100.0 9e-72 MSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARSKNVPFESGIDSVGSARL RLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGA LDWTPARSRRERMNPETNSIANRQR >gi|299857063|gb|ADWS01000001.1| GENE 285 332247 - 332411 61 54 aa, chain + ## HITS:1 COG:no KEGG:ECBD_1372 NR:ns ## KEGG: ECBD_1372 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 54 1 54 54 95 100.0 4e-19 MLLNRVRCEAMEKIRVYFDRNLCRFLPPKESIFLICDTLLSFHNKNAATNLRIF >gi|299857063|gb|ADWS01000001.1| GENE 286 332615 - 333553 921 312 aa, chain - ## HITS:1 COG:lrhA KEGG:ns NR:ns ## COG: lrhA COG0583 # Protein_GI_number: 16130224 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 312 1 312 312 599 99.0 1e-171 MITANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYV LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPE GDDSLLIERDIE >gi|299857063|gb|ADWS01000001.1| GENE 287 334473 - 335690 1046 405 aa, chain + ## HITS:1 COG:yfbQ KEGG:ns NR:ns ## COG: yfbQ COG0436 # Protein_GI_number: 16130225 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 405 1 405 405 853 100.0 0 MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIR NLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGD EMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNP TGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSK TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFI TPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEK VLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLSGYHQL >gi|299857063|gb|ADWS01000001.1| GENE 288 335774 - 336373 713 199 aa, chain + ## HITS:1 COG:ECs3175 KEGG:ns NR:ns ## COG: ECs3175 COG1896 # Protein_GI_number: 15832429 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Escherichia coli O157:H7 # 1 199 1 199 199 369 98.0 1e-102 MKQSHFFAHLSRLKLINRWPLMRNVLTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAER IALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELRDIFAPLI DEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLESRRSQEMDYFME VFVPSFHLSLDEISQDSPL >gi|299857063|gb|ADWS01000001.1| GENE 289 336432 - 338264 1494 610 aa, chain - ## HITS:1 COG:ECs3176 KEGG:ns NR:ns ## COG: ECs3176 COG0471 # Protein_GI_number: 15832430 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 610 1 610 610 1085 100.0 0 MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLTVPEVFSGFSDPNVVLI AALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIP VVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGYHGFSFFSVTP IGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFRDLIREYRLTGRARRLAIRPGSP MIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAADVDLRQ FCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPESELIGKSVREIGFRTRYGLNVVGLKR NGVALEGSLADEPLLLGDIILVVGNWKLIGMLAKQGRDFVALNLPEEVSEASPAHSQAPH AIFCLVLMVALMLTDEIPNPVAAIIACLLMGKFRCIDAESAYKSIHWPSIILIVGMMPFA VALQKTGGVALAVKGLMDIGGGYGPHMMLGCLFVLSAVIGLFISNTATAVLMAPIALAAA KTMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVC VVMIPMLFPF >gi|299857063|gb|ADWS01000001.1| GENE 290 338351 - 339001 441 216 aa, chain - ## HITS:1 COG:ECs3177 KEGG:ns NR:ns ## COG: ECs3177 COG0637 # Protein_GI_number: 15832431 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 394 99.0 1e-110 MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIHGKQAITSLRHFMAGKS EADIAAEFTRLEHIEATETEGITALPGAIALLNHLNKAGIPWAIVTSGSMPVARARHKIA GLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIA VNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ >gi|299857063|gb|ADWS01000001.1| GENE 291 339012 - 339506 642 164 aa, chain - ## HITS:1 COG:ECs3178 KEGG:ns NR:ns ## COG: ECs3178 COG3013 # Protein_GI_number: 15832432 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 164 7 170 170 318 100.0 3e-87 MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQMRELDREFGELKEETCR TIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEARYLGYVRFMVNVEGRYTHF DAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQIINA >gi|299857063|gb|ADWS01000001.1| GENE 292 339589 - 340044 366 151 aa, chain - ## HITS:1 COG:yfbV KEGG:ns NR:ns ## COG: yfbV COG3092 # Protein_GI_number: 16130230 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 151 1 151 151 296 100.0 7e-81 MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLC WQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVL APVEGKPDYQALADTLKRAFKQLDKTFLDDL >gi|299857063|gb|ADWS01000001.1| GENE 293 340382 - 341584 1366 400 aa, chain + ## HITS:1 COG:ECs3180 KEGG:ns NR:ns ## COG: ECs3180 COG0282 # Protein_GI_number: 15832434 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 803 100.0 0 MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARIKWKMDGNKQEAALGAG AAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSSVVIDESVIQGIKDAASFA PLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEESYLYALPYNLYKEHGIRRYG AHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVSAIRNGKCVDTSMGLTPLEGLVM GTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGLLGLTEVTSDCRYVEDNYATKEDAK RAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGIGENAAMVRELSLGKLGVLGFEVDHER NLAARFGKSGFINKEGTRPAVVIPTNEELVIAQDASRLTA >gi|299857063|gb|ADWS01000001.1| GENE 294 341659 - 343803 2377 714 aa, chain + ## HITS:1 COG:pta_1 KEGG:ns NR:ns ## COG: pta_1 COG0857 # Protein_GI_number: 16130232 # Func_class: R General function prediction only # Function: BioD-like N-terminal domain of phosphotransacetylase # Organism: Escherichia coli K12 # 1 391 1 391 391 752 100.0 0 MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRTGGDAPDQTTTIVRAN SSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDAEVVLVEGLVPTRKHQFAQ SLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFGGAKNTNITGVIVNKLNAPVD EQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVLGAVPWSFDLIATRAIDMARHLN ATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSLLVTSADRPDVLVAACLAAMNGVEI GALLLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTSLSLQSFNLEVPVDDHERIEK VQEYVANYINADWIESLTATSERSRRLSPPAFRYQLTELARKAGKRIVLPEGDEPRTVKA AAICAERGIATCVLLGNPAEINRVAASQGVELGAGIEIVDPEVVRESYVGRLVELRKNKG MTETVAREQLEDNVVLGTLMLEQDEVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSV FFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGS DVEKVREATRLAQEKRPDLMIDGPLQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTG NTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ >gi|299857063|gb|ADWS01000001.1| GENE 295 344035 - 345513 1449 492 aa, chain + ## HITS:1 COG:yfcC KEGG:ns NR:ns ## COG: yfcC COG1288 # Protein_GI_number: 16130233 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 492 22 513 513 891 100.0 0 MPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRILTNEAGE PEYHRVQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDN GILALIRHTRGNEILFIPALFILFSLGGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVL VTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIATLIGLIFTMVYASRV KKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEI ASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGE AGDASVLNTILNSIANAISGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGD LVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSS VVVIGAQLMGYH >gi|299857063|gb|ADWS01000001.1| GENE 296 345546 - 346088 611 180 aa, chain - ## HITS:1 COG:ECs3183 KEGG:ns NR:ns ## COG: ECs3183 COG0494 # Protein_GI_number: 15832437 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 180 1 180 180 329 100.0 1e-90 MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVVHDGMGKILVQRRTETK DFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRVWGALF SCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNAKNEAVETETAE >gi|299857063|gb|ADWS01000001.1| GENE 297 346146 - 346697 516 183 aa, chain - ## HITS:1 COG:ECs3184 KEGG:ns NR:ns ## COG: ECs3184 COG0622 # Protein_GI_number: 15832438 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Escherichia coli O157:H7 # 1 183 2 184 184 362 100.0 1e-100 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVAERLN EVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQND VLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGMLDNDVLSVIALNDQSIIAQVA INP >gi|299857063|gb|ADWS01000001.1| GENE 298 346753 - 347397 558 214 aa, chain - ## HITS:1 COG:yfcF KEGG:ns NR:ns ## COG: yfcF COG0625 # Protein_GI_number: 16130236 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 214 1 214 214 420 100.0 1e-117 MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVP LLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREER PTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLVLGQPNLFGEWCIADTDLALMINRLVL HGDEVPERLVDYATFQWQRASVQRFIALSAKQSG >gi|299857063|gb|ADWS01000001.1| GENE 299 347533 - 348180 537 215 aa, chain + ## HITS:1 COG:yfcG KEGG:ns NR:ns ## COG: yfcG COG0625 # Protein_GI_number: 16130237 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 215 1 215 215 442 100.0 1e-124 MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSP ADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNH AAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDL AMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS >gi|299857063|gb|ADWS01000001.1| GENE 300 348237 - 348599 396 120 aa, chain + ## HITS:1 COG:ECs3187 KEGG:ns NR:ns ## COG: ECs3187 COG1539 # Protein_GI_number: 15832441 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Escherichia coli O157:H7 # 1 120 1 120 120 211 100.0 2e-55 MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADKARTSEDINDALNYRTV TKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDKLHALRYADSVSMTLSWQR >gi|299857063|gb|ADWS01000001.1| GENE 301 348620 - 349513 857 297 aa, chain + ## HITS:1 COG:yfcH KEGG:ns NR:ns ## COG: yfcH COG1090 # Protein_GI_number: 16130239 # Func_class: R General function prediction only # Function: Predicted nucleoside-diphosphate sugar epimerase # Organism: Escherichia coli K12 # 1 297 1 297 297 604 99.0 1e-173 MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPRVTLWQGLAAQSNLNGV DAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGD LGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDGGILGKMLPP FRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRGPFNMVSPYPVRNEQFAHALGHA LHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEEALADVVR >gi|299857063|gb|ADWS01000001.1| GENE 302 349561 - 350181 465 206 aa, chain - ## HITS:1 COG:yfcI KEGG:ns NR:ns ## COG: yfcI COG5464 # Protein_GI_number: 16130240 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 206 91 296 296 403 99.0 1e-112 MAFRMMRYSIAAMQNHLDAGYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIY SSAFPLVDITVVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLK ALFNYVLQTGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQEM LDRGLDRELVMMVTRLSPDDLIAQSH >gi|299857063|gb|ADWS01000001.1| GENE 303 350648 - 351421 256 257 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 20 232 20 221 223 103 34 1e-20 MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEG SIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQV LGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPT SALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGAPEQLF GNPQSPRLQQFLKGSLK >gi|299857063|gb|ADWS01000001.1| GENE 304 351429 - 352145 612 238 aa, chain - ## HITS:1 COG:ECs3191 KEGG:ns NR:ns ## COG: ECs3191 COG4160 # Protein_GI_number: 15832445 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 434 100.0 1e-122 MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFLAIGRVSSNKYIQFPIW LFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEI FAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTA TVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKRWLQHVKPSSTH >gi|299857063|gb|ADWS01000001.1| GENE 305 352142 - 352828 699 228 aa, chain - ## HITS:1 COG:hisQ KEGG:ns NR:ns ## COG: hisQ COG4215 # Protein_GI_number: 16130243 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Escherichia coli K12 # 1 228 1 228 228 394 99.0 1e-109 MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVP DLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVP KGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKAT QLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKRADL >gi|299857063|gb|ADWS01000001.1| GENE 306 352918 - 353700 1010 260 aa, chain - ## HITS:1 COG:ECs3193 KEGG:ns NR:ns ## COG: ECs3193 COG0834 # Protein_GI_number: 15832447 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 24 260 24 260 260 464 100.0 1e-131 MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVGFDIDLAKELC KRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAK NSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAA FQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMR ADGTYEKLAKKYFDFDVYGG >gi|299857063|gb|ADWS01000001.1| GENE 307 353921 - 354703 947 260 aa, chain - ## HITS:1 COG:argT KEGG:ns NR:ns ## COG: argT COG0834 # Protein_GI_number: 16130245 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 260 1 260 260 467 100.0 1e-131 MKKSILALSLLVGLSTAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR QDGTYDKMAKKYFDFNVYGD >gi|299857063|gb|ADWS01000001.1| GENE 308 354969 - 355538 544 189 aa, chain - ## HITS:1 COG:ECs3195 KEGG:ns NR:ns ## COG: ECs3195 COG0163 # Protein_GI_number: 15832449 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Escherichia coli O157:H7 # 1 189 1 189 189 355 99.0 3e-98 MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALAD VTHDARDISASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVL CVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAITLPE DLFARWQGA >gi|299857063|gb|ADWS01000001.1| GENE 309 355633 - 357150 1567 505 aa, chain - ## HITS:1 COG:purF KEGG:ns NR:ns ## COG: purF COG0034 # Protein_GI_number: 16130247 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Escherichia coli K12 # 1 505 1 505 505 1027 100.0 0 MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARH MQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKR RHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMV AFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLF TRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVI PIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRD KNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHG REVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLD TLRNDDAKAVQRQNEVENLEMHNEG >gi|299857063|gb|ADWS01000001.1| GENE 310 357187 - 357675 387 162 aa, chain - ## HITS:1 COG:cvpA KEGG:ns NR:ns ## COG: cvpA COG1286 # Protein_GI_number: 16130248 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Escherichia coli K12 # 1 162 1 162 162 268 99.0 4e-72 MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELV RNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFL DSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLPRA >gi|299857063|gb|ADWS01000001.1| GENE 311 357934 - 358596 680 220 aa, chain - ## HITS:1 COG:ZdedD KEGG:ns NR:ns ## COG: ZdedD COG3147 # Protein_GI_number: 15802861 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 220 1 220 220 296 99.0 2e-80 MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAAT QALPTQPPEGAAEEVRAGDAAAPSLDPTTIAANNTEFEPEPAPVAPPKPKPVEPPKPKVE APPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQ GKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN >gi|299857063|gb|ADWS01000001.1| GENE 312 358586 - 359854 1222 422 aa, chain - ## HITS:1 COG:ECs3199 KEGG:ns NR:ns ## COG: ECs3199 COG0285 # Protein_GI_number: 15832453 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Escherichia coli O157:H7 # 1 422 1 422 422 813 99.0 0 MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGVLKPAPFVFTVAGTNGK GTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPESAHTASFAEIESARGDIS LTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVDADVAVVTSIALDHTDWLGPD RESIGREKAGIFRSEKPAIVGEPEMPSTIADVAQEKGALLQRRGVEWNYSVTDHDWAFSD AHGTLENLPLPLVPQPNAATALAALRASGLEVSENAIRDGIASAILPGRFQIVSESPRVI FDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLHDKDIAGTLAWLKSVVDDWYCAPLEGP RGATAEQLLEHLGNGKSFDSVAQAWDAAMADAKAEDTVLVCGSFHTVAHVMEVIDARRSG GK >gi|299857063|gb|ADWS01000001.1| GENE 313 359924 - 360838 1026 304 aa, chain - ## HITS:1 COG:ECs3200 KEGG:ns NR:ns ## COG: ECs3200 COG0777 # Protein_GI_number: 15832454 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Escherichia coli O157:H7 # 1 304 1 304 304 584 100.0 1e-167 MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNR LHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPV VAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKT SAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREK LPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPNPEAPREGVVVPPVPDQ EPEA >gi|299857063|gb|ADWS01000001.1| GENE 314 360994 - 361653 561 219 aa, chain - ## HITS:1 COG:STM2367 KEGG:ns NR:ns ## COG: STM2367 COG0586 # Protein_GI_number: 16765694 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 374 92.0 1e-104 MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA LASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFSNPDSKIFRRSYLDKTHQF YERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLIFTYAGYFFGT LPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK >gi|299857063|gb|ADWS01000001.1| GENE 315 361736 - 362548 582 270 aa, chain - ## HITS:1 COG:ECs3202 KEGG:ns NR:ns ## COG: ECs3202 COG0101 # Protein_GI_number: 15832456 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Escherichia coli O157:H7 # 1 270 1 270 270 556 100.0 1e-158 MSDQQQPPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTD AGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRY IIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMH INVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATA KAEGLYLVAVDYPDRYDLPKPPMGPLFLAD >gi|299857063|gb|ADWS01000001.1| GENE 316 362548 - 363561 1265 337 aa, chain - ## HITS:1 COG:usg KEGG:ns NR:ns ## COG: usg COG0136 # Protein_GI_number: 16130254 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Escherichia coli K12 # 1 337 1 337 337 641 99.0 0 MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAGEQLRFGGKTITVQDAA EFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFALEPDVPLVVPEVNPFVLTD YRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLISASAQGKKAVDALAGQSAKLL NGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVDEVRKILQDEGLMISASVVQAPV FYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEENEFPTQVGDASGTPHLSVGCVRND YGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQEYLY >gi|299857063|gb|ADWS01000001.1| GENE 317 363627 - 364763 1004 378 aa, chain - ## HITS:1 COG:ECs3204 KEGG:ns NR:ns ## COG: ECs3204 COG0111 # Protein_GI_number: 15832458 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 737 98.0 0 MKILVDENMPYARDLFSRLGEVTAVPGRPIPVAQLADADALMVRSVTKVNESLLAGKPIK FVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAERDGFSLHDRTVG IVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQHADILTFHTPLFKD GPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPEL NVELLTKVDIGTPHIAGYTLEGKARGTTQVFEAYSKFIGHEQHVALDTLLPAPEFGRITL HGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPGEFDKLRKNYLERREWSSLYVICDDAS AASLLCKLGFNAVHHPAR >gi|299857063|gb|ADWS01000001.1| GENE 318 364862 - 365857 799 331 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2565 NR:ns ## KEGG: EC55989_2565 # Name: flk # Def: flagella biosynthesis regulator # Organism: E.coli_55989 # Pathway: not_defined # 1 331 1 331 331 518 100.0 1e-145 MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKVTSLTQQQRAELWAGIR HDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQLGEYLRLGNNRQAVTDYI RHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREATDRPLLPAEHNALKQLVTKLA AATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWLQARQTLSQQNTPTLESLQMTLK QPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDILNQLYQRRVKGIDPRVMQPLLNPFP PMMDTLQNMATRPALWILLVAIILMLVWLVR >gi|299857063|gb|ADWS01000001.1| GENE 319 365854 - 367032 1046 392 aa, chain - ## HITS:1 COG:yfcJ KEGG:ns NR:ns ## COG: yfcJ COG0477 # Protein_GI_number: 16130257 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 392 1 392 392 590 100.0 1e-168 MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQ FLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAAILPVSAPFKFALLVVGRL ILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGALAVGAPLGLLIHSHYGFAAL AITTMVLPVLAWACNGTVRKVPALAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVS LYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAP GAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIALGVSGPLAGM LATTFGYSSVFLAGAISAVLGIIVTILSFRRG >gi|299857063|gb|ADWS01000001.1| GENE 320 367297 - 368517 1338 406 aa, chain - ## HITS:1 COG:fabB KEGG:ns NR:ns ## COG: fabB COG0304 # Protein_GI_number: 16130258 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli K12 # 1 406 1 406 406 770 100.0 0 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLI DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAM RGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLG KQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVV EELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVDTPIDYLNSHGT STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN IEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLKD >gi|299857063|gb|ADWS01000001.1| GENE 321 368676 - 370682 1512 668 aa, chain + ## HITS:1 COG:yfcK_2 KEGG:ns NR:ns ## COG: yfcK_2 COG0665 # Protein_GI_number: 16130259 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 256 667 1 412 413 828 99.0 0 MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLF VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPEL APWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF APAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREML CGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPA LGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWNEKS QHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ QQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSHTSTLPVYSVA GQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQ RLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEA VSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLL KGKAVKAR >gi|299857063|gb|ADWS01000001.1| GENE 322 370803 - 371081 369 92 aa, chain - ## HITS:1 COG:no KEGG:ECB_02250 NR:ns ## KEGG: ECB_02250 # Name: yfcL # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 92 1 92 92 154 100.0 1e-36 MIAEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQS LEKAIGAGELSPRDQALVTDMWENLFQQASQQ >gi|299857063|gb|ADWS01000001.1| GENE 323 371115 - 371663 508 182 aa, chain - ## HITS:1 COG:yfcM KEGG:ns NR:ns ## COG: yfcM COG3101 # Protein_GI_number: 16130261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 182 1 182 182 375 98.0 1e-104 MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPADAEVPYNRIVFAHGFYASAIHE ISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQALDWLFCVAAGYPFNVSC DNLEGDFEPDRVVFQRRVHAQVMDYLANGIPERPARFIKALQNYYHTPELTAEQFPWPEA LN >gi|299857063|gb|ADWS01000001.1| GENE 324 371663 - 372472 849 269 aa, chain - ## HITS:1 COG:ECs3211 KEGG:ns NR:ns ## COG: ECs3211 COG0730 # Protein_GI_number: 15832465 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 450 100.0 1e-126 METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQ ACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICI GLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLA KATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP MIVIVSAVMSAKLLYDSHGQEILHWLGMN >gi|299857063|gb|ADWS01000001.1| GENE 325 372472 - 373296 562 274 aa, chain - ## HITS:1 COG:mepA KEGG:ns NR:ns ## COG: mepA COG3770 # Protein_GI_number: 16130263 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein endopeptidase # Organism: Escherichia coli K12 # 1 274 1 274 274 514 98.0 1e-146 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV MRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNP AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPPGDGCGAELQ SWFAPPKPGTTKPEKKTPSPLPPSCQALLDEHVI >gi|299857063|gb|ADWS01000001.1| GENE 326 373300 - 374385 1106 361 aa, chain - ## HITS:1 COG:ECs3213 KEGG:ns NR:ns ## COG: ECs3213 COG0082 # Protein_GI_number: 15832467 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Escherichia coli O157:H7 # 1 361 1 361 361 696 99.0 0 MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRR EPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDY RGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLEIKDWSLVEQNPFFC PDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQQIIAHMALKPTSSITV PGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPR W >gi|299857063|gb|ADWS01000001.1| GENE 327 374420 - 375352 1632 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|191165479|ref|ZP_03027320.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli B7A] # 1 310 1 310 310 633 99 1e-180 MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDEAVQLVLPSLYLPLDIP EDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGEL INNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHG LIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKL TRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDVPFTWLEFDNGGDGVFMLTKEQLLA AREYFAIYKD >gi|299857063|gb|ADWS01000001.1| GENE 328 375518 - 376069 565 183 aa, chain + ## HITS:1 COG:yfcN KEGG:ns NR:ns ## COG: yfcN COG2840 # Protein_GI_number: 16130266 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 183 1 183 183 349 100.0 2e-96 MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSD EFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACR REHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPP ELP >gi|299857063|gb|ADWS01000001.1| GENE 329 376142 - 376741 223 199 aa, chain - ## HITS:1 COG:no KEGG:ECO111_3080 NR:ns ## KEGG: ECO111_3080 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 199 85 283 283 413 100.0 1e-114 MERNNTTLPDSTCPGLEEYDALSPVTAWSCNELVLGVYYDGDLHGCPWIVSSYVESASTM DQRFGAGIFIGPTKVSSDCPTESLAPYDVSWNENYVVHNKVVRLQSTGGVIEQTLPTFLM ENGKLCDGSNFDERGAYCRFVAQQMTFSTSGCDNAKVTVTPEPQPITSRQLHDMKLRVDT TSRQPIDSTCRFTYILNMY >gi|299857063|gb|ADWS01000001.1| GENE 330 376995 - 377534 463 179 aa, chain - ## HITS:1 COG:yfcP KEGG:ns NR:ns ## COG: yfcP COG3539 # Protein_GI_number: 16130268 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 179 1 179 179 260 77.0 8e-70 MKTAHIYSPGYALLAGLLLTASTGAQAVDNNLHFYGNLLSKSCTLVVDGANLAEIHFPTV SNRDLMVSGQSAHLPVVFKLKDCKGPAGYNVKVTLSGTEDSGQPGFLAVDDTSTAQGVGI GMETLDGKRVDINNTTGATFALTNGNNDINFRAWIQAKSGRDVTIGDFTASLTATFEYI >gi|299857063|gb|ADWS01000001.1| GENE 331 377531 - 378019 402 162 aa, chain - ## HITS:1 COG:yfcQ KEGG:ns NR:ns ## COG: yfcQ COG3539 # Protein_GI_number: 16130269 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 162 1 162 162 262 76.0 2e-70 MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIEVQFRDLIIDSIDGNYG RQKVDYELSCDSDVRDPEWNMTLSWTGTATSYNDSAIETDVPGFGIELQHDGQRFKLNEP LSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVDYQ >gi|299857063|gb|ADWS01000001.1| GENE 332 378016 - 378525 265 169 aa, chain - ## HITS:1 COG:yfcR KEGG:ns NR:ns ## COG: yfcR COG3539 # Protein_GI_number: 16130270 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 169 6 170 170 234 72.0 8e-62 MSHKFVAGAGLLVLAGWGISGLAVAGSDIKQVDLTLRILVDGPPPCSVKGSAVKFGNVII NRIDGTNYQQDAKYTLNCGNKVSDDLRMQLKGNTAVINGETVLSTDIAGLGVRIENAADN SLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNATMTMVVDYQ >gi|299857063|gb|ADWS01000001.1| GENE 333 378541 - 379293 641 250 aa, chain - ## HITS:1 COG:ECs3220 KEGG:ns NR:ns ## COG: ECs3220 COG3121 # Protein_GI_number: 15832474 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 # 1 250 1 250 252 389 79.0 1e-108 MFNLTNTAKIVVPALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPTLPYL AQSWIEDAKGNKISSPLAVLPPVQRIDAMMNGQVKVQGLPDINKLPADRESVFYFNVREI PPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKVTLIRNGQDFTVNNPTPYYVI ISNASAKKGGNPPAGFTPLMMEPKTSAPLNAKMDSVPVLTYINDYGARMPLYFICTGNSC QVDEEQSRKG >gi|299857063|gb|ADWS01000001.1| GENE 334 379313 - 380839 1479 508 aa, chain - ## HITS:1 COG:yfcUm KEGG:ns NR:ns ## COG: yfcUm COG3188 # Protein_GI_number: 16132272 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 508 374 881 881 965 95.0 0 MMGRPQEWGHHVEGEFFSGAEASWGIANGWSLYGGALGDENYQSAALGVGRDLSTFGAVA FDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYL DASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNM GSIRNVSISMTGYRYEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRV DDATHYQLNVGTSDKHTSVDGYYSHDGSLAQVDFSANYHEGQYTSAGLSLQGGATLTAHG GALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNNYYRNQAYIDLNR LPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPPFGAEVKNDNEQTV GLVDDDGNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPIT SPAVKPAIQEQTQRVTPTEPPTSISVNQ Prediction of potential genes in microbial genomes Time: Sun May 15 21:38:49 2011 Seq name: gi|299857062|gb|ADWS01000002.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont1.1, whole genome shotgun sequence Length of sequence - 305710 bp Number of predicted genes - 309, with homology - 304 Number of transcription units - 174, operones - 63 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 27 - 551 229 ## COG2071 Predicted glutamine amidotransferases - Prom 631 - 690 4.6 + Prom 628 - 687 5.4 2 2 Tu 1 . + CDS 775 - 2193 1179 ## COG0174 Glutamine synthetase + Term 2213 - 2252 1.2 + Prom 2394 - 2453 2.2 3 3 Tu 1 . + CDS 2496 - 3881 1497 ## COG0531 Amino acid transporters + Prom 3923 - 3982 3.9 4 4 Tu 1 . + CDS 4015 - 4260 302 ## SDY_1637 hypothetical protein + Prom 4491 - 4550 3.5 5 5 Op 1 8/0.056 + CDS 4573 - 6216 1468 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 6 5 Op 2 8/0.056 + CDS 6213 - 7178 591 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 7 5 Op 3 8/0.056 + CDS 7165 - 8055 883 ## COG4171 ABC-type antimicrobial peptide transport system, permease component 8 5 Op 4 8/0.056 + CDS 8055 - 9047 468 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 9 5 Op 5 1/0.833 + CDS 9037 - 9855 448 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 10 5 Op 6 1/0.833 + CDS 9926 - 10276 104 ## COG2852 Uncharacterized protein conserved in bacteria + Prom 10504 - 10563 3.6 11 6 Tu 1 . + CDS 10644 - 11432 1060 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) + Term 11453 - 11483 4.1 + Prom 11436 - 11495 2.7 12 7 Op 1 1/0.833 + CDS 11577 - 12704 332 ## COG4950 Uncharacterized protein conserved in bacteria 13 7 Op 2 4/0.463 + CDS 12772 - 14706 2003 ## COG4776 Exoribonuclease II + Term 14717 - 14753 6.3 + Prom 14794 - 14853 6.4 14 8 Tu 1 . + CDS 14942 - 16927 1060 ## COG2200 FOG: EAL domain + Term 16998 - 17040 3.1 + Prom 16935 - 16994 6.3 15 9 Op 1 . + CDS 17074 - 17247 236 ## EC55989_1446 hypothetical protein + Prom 17249 - 17308 7.3 16 9 Op 2 . + CDS 17337 - 18086 667 ## COG1349 Transcriptional regulators of sugar metabolism + Term 18097 - 18155 4.1 + Prom 18148 - 18207 5.9 17 10 Tu 1 . + CDS 18355 - 18573 344 ## G2583_1624 hypothetical protein + Term 18667 - 18706 8.4 - Term 18659 - 18690 4.1 18 11 Op 1 6/0.148 - CDS 18699 - 19025 464 ## COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins 19 11 Op 2 7/0.074 - CDS 19025 - 19762 648 ## COG0284 Orotidine-5'-phosphate decarboxylase - Prom 19814 - 19873 7.7 20 12 Op 1 8/0.056 - CDS 19954 - 21123 1129 ## COG2956 Predicted N-acetylglucosaminyl transferase 21 12 Op 2 5/0.259 - CDS 21130 - 21438 201 ## PROTEIN SUPPORTED gi|46133578|ref|ZP_00203203.1| COG3771: Predicted membrane protein - Prom 21502 - 21561 2.9 22 13 Tu 1 . - CDS 21587 - 22351 380 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 22372 - 22431 4.5 + Prom 22388 - 22447 1.6 23 14 Tu 1 . + CDS 22521 - 23111 649 ## COG0807 GTP cyclohydrolase II + Term 23134 - 23182 5.5 - Term 23078 - 23114 4.1 24 15 Tu 1 . - CDS 23175 - 25850 2430 ## COG1048 Aconitase A - Prom 25900 - 25959 3.5 - Term 25975 - 26010 5.2 25 16 Tu 1 . - CDS 26014 - 26109 64 ## - Prom 26142 - 26201 1.9 26 17 Op 1 . - CDS 26223 - 26390 135 ## SSON_1865 hypothetical protein 27 17 Op 2 . - CDS 26393 - 26521 68 ## EC55989_1434 hypothetical protein - Prom 26575 - 26634 6.0 - Term 26789 - 26841 9.1 28 18 Tu 1 . - CDS 26852 - 27826 809 ## COG0583 Transcriptional regulator - Prom 27893 - 27952 7.5 - Term 27974 - 28004 2.1 29 19 Tu 1 . - CDS 28036 - 30633 2640 ## COG0550 Topoisomerase IA - Prom 30795 - 30854 3.7 - Term 30674 - 30715 1.8 30 20 Tu 1 . - CDS 30865 - 31035 58 ## ECS88_1410 hypothetical protein - Prom 31236 - 31295 1.6 + Prom 30833 - 30892 4.8 31 21 Tu 1 . + CDS 31013 - 31264 400 ## ECIAI1_1292 hypothetical protein + Term 31267 - 31307 6.3 - Term 31255 - 31295 6.6 32 22 Tu 1 . - CDS 31300 - 32364 1053 ## COG0616 Periplasmic serine proteases (ClpP class) - Prom 32394 - 32453 3.6 + Prom 32473 - 32532 2.1 33 23 Op 1 5/0.259 + CDS 32584 - 33342 691 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 34 23 Op 2 . + CDS 33339 - 33929 622 ## COG2109 ATP:corrinoid adenosyltransferase + Term 33940 - 33973 2.5 - Term 33928 - 33960 1.5 35 24 Tu 1 4/0.463 - CDS 33969 - 34841 1173 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Term 34879 - 34908 1.2 36 25 Op 1 6/0.148 - CDS 34942 - 35562 731 ## COG0009 Putative translation factor (SUA5) 37 25 Op 2 . - CDS 35559 - 36440 356 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) - Prom 36519 - 36578 5.8 + Prom 36492 - 36551 6.1 38 26 Op 1 10/0.056 + CDS 36714 - 38276 1638 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 39 26 Op 2 21/0.000 + CDS 38276 - 39871 1505 ## COG0547 Anthranilate phosphoribosyltransferase 40 26 Op 3 13/0.037 + CDS 39875 - 41233 1123 ## COG0134 Indole-3-glycerol phosphate synthase 41 26 Op 4 37/0.000 + CDS 41245 - 42438 1290 ## COG0133 Tryptophan synthase beta chain 42 26 Op 5 2/0.796 + CDS 42438 - 43244 392 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc + Term 43252 - 43284 5.4 + Prom 43427 - 43486 4.8 43 27 Op 1 3/0.574 + CDS 43625 - 43804 214 ## COG3729 General stress protein + Term 43845 - 43884 6.2 44 27 Op 2 4/0.463 + CDS 43890 - 44390 597 ## COG3685 Uncharacterized protein conserved in bacteria 45 27 Op 3 . + CDS 44436 - 44942 614 ## COG3685 Uncharacterized protein conserved in bacteria + Term 44966 - 45000 6.0 46 28 Tu 1 . - CDS 45002 - 45109 75 ## COG3047 Outer membrane protein W - Prom 45268 - 45327 4.2 + Prom 45340 - 45399 2.6 47 29 Tu 1 . + CDS 45585 - 46142 277 ## COG3646 Uncharacterized phage-encoded protein + Term 46154 - 46186 1.3 - Term 46492 - 46539 2.1 48 30 Tu 1 . - CDS 46554 - 46823 145 ## COG5525 Bacteriophage tail assembly protein - Prom 46865 - 46924 6.8 + Prom 46808 - 46867 5.8 49 31 Tu 1 . + CDS 46892 - 47548 -36 ## COG0500 SAM-dependent methyltransferases + Term 47698 - 47736 1.0 - Term 47537 - 47592 6.2 50 32 Op 1 . - CDS 47603 - 48187 290 ## COG5525 Bacteriophage tail assembly protein 51 32 Op 2 . - CDS 48187 - 51213 723 ## ECUMN_1364 side tail fiber protein from bacteriophage origin - Term 51219 - 51260 7.7 52 33 Op 1 2/0.796 - CDS 51364 - 51963 570 ## COG3637 Opacity protein and related surface antigens - Term 51981 - 52011 3.0 53 33 Op 2 5/0.259 - CDS 52031 - 55504 2327 ## COG4733 Phage-related protein, tail component - Prom 55700 - 55759 3.5 - Term 55593 - 55639 11.8 54 34 Op 1 6/0.148 - CDS 55848 - 56528 469 ## COG4723 Phage-related protein, tail component 55 34 Op 2 6/0.148 - CDS 56426 - 57169 143 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 56 34 Op 3 5/0.259 - CDS 57180 - 57878 604 ## COG4672 Phage-related protein 57 34 Op 4 6/0.148 - CDS 57878 - 58207 157 ## COG4718 Phage-related protein 58 34 Op 5 . - CDS 58204 - 60777 2265 ## COG5281 Phage-related minor tail protein 59 34 Op 6 . - CDS 60758 - 61171 168 ## ECS88_1378 minor tail protein T 60 34 Op 7 . - CDS 61198 - 61629 462 ## ECIAI39_1862 minor tail protein G 61 34 Op 8 . - CDS 61648 - 62394 734 ## COG5492 Bacterial surface proteins containing Ig-like domains 62 34 Op 9 . - CDS 62402 - 62797 477 ## ECUMN_1352 minor tail protein U 63 34 Op 10 . - CDS 62794 - 63369 279 ## ECED1_2093 minor tail protein Z (GpZ) 64 34 Op 11 . - CDS 63385 - 63738 254 ## ECS88_1373 tail attachment protein (minor capsid protein FII) 65 34 Op 12 . - CDS 63731 - 64114 285 ## EC55989_1396 conserved hypothetical protein from phage origin - Term 64123 - 64160 5.0 66 35 Op 1 . - CDS 64166 - 65194 1284 ## ECIAI39_1868 major head protein (head protein gp7) - Term 65209 - 65244 3.4 67 35 Op 2 . - CDS 65252 - 65599 336 ## ECIAI39_1869 head decoration protein (gpD) (major capsid protein D) 68 35 Op 3 4/0.463 - CDS 65636 - 67141 1143 ## COG0616 Periplasmic serine proteases (ClpP class) 69 35 Op 4 . - CDS 67131 - 68723 1096 ## COG5511 Bacteriophage capsid protein 70 35 Op 5 . - CDS 68720 - 68926 201 ## ECS88_1367 head stabilization protein (head protein GP3) 71 35 Op 6 4/0.463 - CDS 68910 - 70658 1410 ## COG5525 Bacteriophage tail assembly protein - Term 70663 - 70693 1.0 72 36 Tu 1 . - CDS 70810 - 71358 282 ## COG4220 Phage DNA packaging protein, Nu1 subunit of terminase - Prom 71578 - 71637 4.7 + Prom 71392 - 71451 6.8 73 37 Tu 1 . + CDS 71673 - 71999 294 ## COG2963 Transposase and inactivated derivatives + Term 72243 - 72277 -0.9 - Term 72816 - 72848 1.4 74 38 Op 1 . - CDS 72969 - 73436 383 ## EC55989_1058 endopeptidase (lysis protein) from bacteriophage origin 75 38 Op 2 . - CDS 73438 - 73536 72 ## - Term 73596 - 73646 8.2 76 39 Tu 1 . - CDS 73735 - 74268 266 ## COG3772 Phage-related lysozyme (muraminidase) + Prom 74260 - 74319 1.6 77 40 Tu 1 . + CDS 74374 - 74646 175 ## SbBS512_E0946 hypothetical protein + Term 74689 - 74723 3.2 - Term 74492 - 74534 -0.5 78 41 Op 1 . - CDS 74612 - 74956 341 ## SbBS512_E0945 hypothetical protein 79 41 Op 2 . - CDS 74961 - 75176 298 ## ECSP_2956 putative lysis protein S of prophage CP-933V - Prom 75196 - 75255 3.8 - Term 75205 - 75243 5.3 80 42 Tu 1 . - CDS 75327 - 77051 847 ## COG2801 Transposase and inactivated derivatives - TRNA 78154 - 78230 86.1 # Arg TCT 0 0 - TRNA 78328 - 78403 88.5 # Met CAT 0 0 81 43 Tu 1 . - CDS 78453 - 79502 689 ## COG0863 DNA modification methylase 82 44 Tu 1 . - CDS 79653 - 79850 145 ## ECSP_1670 hypothetical protein - Prom 79941 - 80000 5.7 83 45 Op 1 . - CDS 80065 - 80754 237 ## ECUMN_1328 antitermination protein Q 84 45 Op 2 . - CDS 80751 - 81116 236 ## COG4570 Holliday junction resolvase 85 45 Op 3 . - CDS 81117 - 82100 561 ## ECO26_1478 hypothetical protein - Term 82373 - 82412 1.1 86 46 Tu 1 . - CDS 82519 - 82770 212 ## SDY_1433 hypothetical protein - Prom 82842 - 82901 7.5 - Term 82891 - 82916 -0.5 87 47 Tu 1 . - CDS 82987 - 83199 199 ## ECO103_1375 regulatory protein for HokC - Prom 83310 - 83369 5.2 + Prom 83795 - 83854 7.9 88 48 Op 1 . + CDS 83885 - 84580 150 ## EC55989_1371 hypothetical protein 89 48 Op 2 . + CDS 84653 - 85246 152 ## COG0500 SAM-dependent methyltransferases + Term 85254 - 85296 1.5 90 49 Tu 1 . - CDS 85561 - 86460 410 ## EC55989_1369 hypothetical protein - Prom 86514 - 86573 7.7 - Term 86607 - 86648 1.3 91 50 Op 1 . - CDS 86713 - 87135 91 ## EC55989_1368 conserved hypothetical protein from phage origin 92 50 Op 2 . - CDS 87176 - 88141 414 ## ECUMN_1852 hypothetical protein 93 50 Op 3 . - CDS 88122 - 88643 152 ## ECUMN_1853 hypothetical protein 94 50 Op 4 . - CDS 88627 - 88854 95 ## EC55989_1365 DNA-binding transcriptional regulator DicC - Prom 88875 - 88934 3.0 95 51 Tu 1 . + CDS 88932 - 89339 202 ## COG1396 Predicted transcriptional regulators + Prom 89403 - 89462 3.6 96 52 Op 1 . + CDS 89532 - 89687 184 ## ECUMN_1856 hypothetical protein 97 52 Op 2 . + CDS 89647 - 89817 183 ## ECUMN_1857 hypothetical protein 98 52 Op 3 . + CDS 89847 - 90065 237 ## EcSMS35_1156 hypothetical protein - Term 89851 - 89897 -0.3 99 53 Tu 1 . - CDS 90069 - 90233 99 ## ECIAI1_1623 hypothetical protein + Prom 90416 - 90475 3.1 100 54 Op 1 . + CDS 90633 - 90821 182 ## ECUMN_1859 putative regulator of cell division encoded by prophage 101 54 Op 2 . + CDS 90818 - 91009 162 ## JW1567 hypothetical protein 102 54 Op 3 . + CDS 91102 - 93573 1347 ## ECIAI1_1626 putative exonuclease from phage origin + Term 93575 - 93611 -0.2 - Term 93390 - 93424 0.3 103 55 Tu 1 . - CDS 93570 - 93662 90 ## - Prom 93711 - 93770 5.0 104 56 Op 1 . + CDS 93646 - 93897 204 ## ECED1_1745 putative excisionase 105 56 Op 2 . + CDS 93932 - 95212 301 ## COG0582 Integrase - Term 95145 - 95185 -0.0 106 57 Op 1 7/0.074 - CDS 95214 - 95342 65 ## COG0477 Permeases of the major facilitator superfamily 107 57 Op 2 2/0.796 - CDS 95400 - 96419 937 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 108 57 Op 3 2/0.796 - CDS 96431 - 97645 1300 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 97783 - 97842 4.0 109 58 Tu 1 . - CDS 97851 - 98177 261 ## COG1742 Uncharacterized conserved protein - Prom 98301 - 98360 4.6 + Prom 98153 - 98212 4.6 110 59 Op 1 . + CDS 98312 - 98653 342 ## B21_01542 hypothetical protein 111 59 Op 2 . + CDS 98688 - 99248 484 ## PROTEIN SUPPORTED gi|116490772|ref|YP_810316.1| acetyltransferase - Term 99201 - 99240 -0.7 112 60 Tu 1 . - CDS 99251 - 99997 533 ## ECBD_2061 hypothetical protein - Prom 100212 - 100271 3.2 + Prom 99988 - 100047 2.3 113 61 Tu 1 . + CDS 100069 - 100374 203 ## ECSE_1707 hypothetical protein + Term 100391 - 100426 3.7 + Prom 100488 - 100547 5.4 114 62 Op 1 5/0.259 + CDS 100573 - 102999 2120 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 115 62 Op 2 16/0.000 + CDS 103060 - 105483 1678 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 116 62 Op 3 9/0.056 + CDS 105494 - 106111 420 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 117 62 Op 4 4/0.463 + CDS 106113 - 106967 743 ## COG3302 DMSO reductase anchor subunit + Term 106975 - 107005 3.0 118 62 Op 5 . + CDS 107010 - 107624 546 ## COG3381 Uncharacterized component of anaerobic dehydrogenases + Prom 107634 - 107693 4.2 119 63 Tu 1 . + CDS 107819 - 109075 1111 ## COG0038 Chloride channel protein EriC - Term 108946 - 108984 7.6 120 64 Tu 1 . - CDS 109028 - 109723 744 ## COG0132 Dethiobiotin synthetase - Prom 109743 - 109802 4.7 - Term 109742 - 109806 6.5 121 65 Op 1 5/0.259 - CDS 109848 - 111068 274 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 - Prom 111106 - 111165 1.6 122 65 Op 2 . - CDS 111203 - 112096 204 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 - Prom 112120 - 112179 4.7 + Prom 112076 - 112135 5.3 123 66 Tu 1 . + CDS 112203 - 113456 1006 ## COG0477 Permeases of the major facilitator superfamily + Term 113466 - 113504 0.5 + Prom 113684 - 113743 6.5 124 67 Op 1 . + CDS 113880 - 114188 286 ## + Prom 114361 - 114420 3.4 125 67 Op 2 . + CDS 114464 - 115285 487 ## COG3591 V8-like Glu-specific endopeptidase + Term 115294 - 115329 7.5 - Term 115282 - 115317 7.5 126 68 Op 1 12/0.037 - CDS 115324 - 115653 459 ## COG2076 Membrane transporters of cations and cationic drugs 127 68 Op 2 . - CDS 115640 - 116005 430 ## COG2076 Membrane transporters of cations and cationic drugs - Prom 116209 - 116268 4.5 + Prom 116310 - 116369 4.7 128 69 Tu 1 . + CDS 116417 - 117451 1025 ## COG0628 Predicted permease - Term 117437 - 117472 7.4 129 70 Op 1 17/0.000 - CDS 117476 - 118864 1405 ## COG1282 NAD/NADP transhydrogenase beta subunit 130 70 Op 2 . - CDS 118875 - 120407 1575 ## COG3288 NAD/NADP transhydrogenase alpha subunit - Prom 120493 - 120552 4.5 + Prom 120753 - 120812 5.0 131 71 Tu 1 . + CDS 120931 - 121875 1018 ## EC55989_1769 hypothetical protein + Term 121896 - 121924 1.3 + Prom 121924 - 121983 4.6 132 72 Op 1 7/0.074 + CDS 122061 - 123443 1357 ## COG0531 Amino acid transporters 133 72 Op 2 . + CDS 123480 - 124202 647 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 134 73 Tu 1 . - CDS 124199 - 124534 322 ## COG3136 Uncharacterized membrane protein required for alginate biosynthesis - Prom 124564 - 124623 5.1 + Prom 124406 - 124465 4.1 135 74 Op 1 40/0.000 + CDS 124663 - 125382 593 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 136 74 Op 2 . + CDS 125386 - 126687 1150 ## COG0642 Signal transduction histidine kinase 137 74 Op 3 . + CDS 126763 - 127692 667 ## EcSMS35_1588 DNA replication terminus site-binding protein - Term 127622 - 127679 1.5 138 75 Tu 1 4/0.463 - CDS 127689 - 129092 1472 ## COG0114 Fumarase - Prom 129170 - 129229 2.2 - Term 129198 - 129231 3.6 139 76 Tu 1 . - CDS 129235 - 130881 489 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase - Prom 130951 - 131010 5.2 + Prom 130978 - 131037 4.3 140 77 Tu 1 . + CDS 131080 - 132255 1304 ## COG1482 Phosphomannose isomerase + Term 132313 - 132346 4.1 + Prom 132257 - 132316 1.9 141 78 Tu 1 . + CDS 132356 - 133864 1599 ## COG5339 Uncharacterized protein conserved in bacteria + Term 133878 - 133915 6.1 - Term 133864 - 133901 6.1 142 79 Op 1 . - CDS 133909 - 135174 997 ## JW1607 predicted outer membrane porin protein 143 79 Op 2 1/0.833 - CDS 135213 - 136586 1419 ## COG2211 Na+/melibiose symporter and related transporters 144 79 Op 3 2/0.796 - CDS 136583 - 138394 1791 ## COG3250 Beta-galactosidase/beta-glucuronidase - Prom 138498 - 138557 3.7 - Term 138731 - 138770 5.0 145 80 Tu 1 . - CDS 138782 - 139369 603 ## COG1309 Transcriptional regulator - Prom 139394 - 139453 4.9 146 81 Tu 1 . - CDS 139601 - 140368 245 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 140388 - 140447 2.0 147 82 Tu 1 . - CDS 140480 - 141508 759 ## COG1609 Transcriptional regulators - Prom 141558 - 141617 7.4 + Prom 141529 - 141588 5.3 148 83 Op 1 3/0.574 + CDS 141683 - 143275 1581 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 149 83 Op 2 3/0.574 + CDS 143285 - 144457 968 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities + Term 144460 - 144510 7.1 + Prom 144472 - 144531 7.0 150 84 Tu 1 . + CDS 144561 - 145562 1094 ## COG1816 Adenosine deaminase + Term 145568 - 145604 8.2 - Term 145556 - 145592 8.2 151 85 Tu 1 . - CDS 145597 - 146637 933 ## COG0673 Predicted dehydrogenases and related proteins - Prom 146691 - 146750 4.5 152 86 Tu 1 . + CDS 146850 - 147005 81 ## EC55989_1792 beta-lactam resistance membrane protein + Term 147026 - 147061 4.1 + Prom 147083 - 147142 3.7 153 87 Tu 1 . + CDS 147278 - 147493 254 ## G2583_2020 OriC-binding nucleoid-associated protein + Prom 147496 - 147555 4.1 154 88 Op 1 . + CDS 147579 - 148019 391 ## SSON_1532 hypothetical protein 155 88 Op 2 12/0.037 + CDS 148096 - 148677 586 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 156 88 Op 3 10/0.056 + CDS 148677 - 149255 463 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 157 88 Op 4 12/0.037 + CDS 149248 - 151566 2182 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 158 88 Op 5 12/0.037 + CDS 151567 - 152625 853 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 159 88 Op 6 13/0.037 + CDS 152629 - 153249 571 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 160 88 Op 7 10/0.056 + CDS 153253 - 153948 746 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 161 88 Op 8 . + CDS 153948 - 154583 605 ## COG0177 Predicted EndoIII-related endonuclease + Prom 154589 - 154648 2.6 162 89 Tu 1 . + CDS 154711 - 154911 99 ## UTI89_C1824 hypothetical protein + Prom 154970 - 155029 4.5 163 90 Tu 1 . + CDS 155194 - 156696 1587 ## COG3104 Dipeptide/tripeptide permease + Term 156720 - 156754 5.2 + Prom 156722 - 156781 4.2 164 91 Tu 1 . + CDS 156802 - 157407 705 ## COG0625 Glutathione S-transferase + Term 157410 - 157458 6.0 - Term 157399 - 157441 5.0 165 92 Op 1 5/0.259 - CDS 157451 - 158311 839 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase - Term 158320 - 158357 7.8 166 92 Op 2 5/0.259 - CDS 158373 - 159647 826 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 - Prom 159712 - 159771 3.2 167 93 Op 1 3/0.574 - CDS 159776 - 160432 684 ## COG0259 Pyridoxamine-phosphate oxidase 168 93 Op 2 3/0.574 - CDS 160491 - 160814 267 ## COG3895 Predicted periplasmic protein 169 94 Tu 1 . - CDS 160918 - 162027 780 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases - Prom 162097 - 162156 3.2 + Prom 162143 - 162202 6.8 170 95 Tu 1 . + CDS 162301 - 162768 580 ## COG3133 Outer membrane lipoprotein + Term 162777 - 162820 5.5 - Term 162761 - 162805 4.3 171 96 Tu 1 . - CDS 162815 - 163255 367 ## COG1846 Transcriptional regulators - Prom 163403 - 163462 6.8 + Prom 163247 - 163306 9.9 172 97 Op 1 . + CDS 163450 - 163686 123 ## ECUMN_1934 conserved hypothetical protein; putative inner membrane protein 173 97 Op 2 6/0.148 + CDS 163776 - 164546 626 ## COG1566 Multidrug resistance efflux pump 174 97 Op 3 . + CDS 164546 - 166558 1285 ## COG1289 Predicted membrane protein + Term 166696 - 166733 2.2 - Term 166451 - 166486 2.4 175 98 Op 1 3/0.574 - CDS 166559 - 167095 695 ## COG2032 Cu/Zn superoxide dismutase 176 98 Op 2 . - CDS 167161 - 168057 1031 ## COG4989 Predicted oxidoreductase - Prom 168080 - 168139 4.1 + Prom 168178 - 168237 2.2 177 99 Op 1 6/0.148 + CDS 168448 - 169047 527 ## COG1309 Transcriptional regulator 178 99 Op 2 4/0.463 + CDS 169084 - 170181 1150 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 179 99 Op 3 7/0.074 + CDS 170262 - 170669 216 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase + Term 170678 - 170713 5.2 + Prom 170685 - 170744 3.9 180 100 Op 1 3/0.574 + CDS 170772 - 171419 708 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 181 100 Op 2 . + CDS 171512 - 176128 3171 ## COG1201 Lhr-like helicases + Term 176148 - 176189 -0.8 - Term 176124 - 176164 8.5 182 101 Tu 1 . - CDS 176179 - 176526 521 ## COG0278 Glutaredoxin-related protein - Prom 176560 - 176619 4.7 + Prom 176748 - 176807 7.1 183 102 Tu 1 . + CDS 176861 - 177676 483 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 177680 - 177721 8.1 + Prom 177692 - 177751 4.4 184 103 Tu 1 . + CDS 177804 - 178385 462 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 178498 - 178531 5.4 185 104 Tu 1 . - CDS 178531 - 179700 1203 ## COG2814 Arabinose efflux permease - Prom 179746 - 179805 3.4 - Term 179766 - 179815 2.4 186 105 Tu 1 . - CDS 179866 - 179955 125 ## - Prom 179985 - 180044 4.9 + Prom 180038 - 180097 4.0 187 106 Tu 1 . + CDS 180254 - 181279 1077 ## COG1609 Transcriptional regulators + Term 181286 - 181332 0.5 - Term 181143 - 181195 2.1 188 107 Tu 1 . - CDS 181276 - 182208 612 ## COG0583 Transcriptional regulator - Prom 182237 - 182296 4.4 + Prom 182230 - 182289 2.9 189 108 Tu 1 . + CDS 182321 - 183532 1136 ## COG0477 Permeases of the major facilitator superfamily + Term 183732 - 183764 1.0 + Prom 183536 - 183595 7.3 190 109 Tu 1 . + CDS 183823 - 184971 1012 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases + Term 184983 - 185015 4.6 - Term 184940 - 184975 0.4 191 110 Tu 1 . - CDS 185011 - 185652 710 ## COG0307 Riboflavin synthase alpha chain - Prom 185866 - 185925 3.6 + Prom 185727 - 185786 5.7 192 111 Tu 1 . + CDS 185867 - 187240 1462 ## COG0534 Na+-driven multidrug efflux pump + Term 187247 - 187289 8.3 - Term 187235 - 187277 7.5 193 112 Tu 1 . - CDS 187281 - 188537 903 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 188574 - 188633 3.3 + TRNA 188845 - 188921 92.3 # Val GAC 0 0 + TRNA 188926 - 189002 96.8 # Val GAC 0 0 + Prom 188928 - 188987 80.2 194 113 Op 1 . + CDS 189110 - 189415 330 ## SSON_1489 hypothetical protein + Term 189430 - 189456 -0.7 + Prom 189421 - 189480 3.3 195 113 Op 2 . + CDS 189541 - 191145 957 ## COG4529 Uncharacterized protein conserved in bacteria + Term 191158 - 191192 -0.5 196 114 Op 1 . - CDS 191157 - 191969 242 ## EC55989_1836 hypothetical protein 197 114 Op 2 3/0.574 - CDS 191973 - 192758 616 ## COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) 198 114 Op 3 . - CDS 192755 - 193423 207 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 199 114 Op 4 . - CDS 193487 - 194125 469 ## EcE24377A_1887 hypothetical protein 200 114 Op 5 5/0.259 - CDS 194138 - 196240 2002 ## COG2414 Aldehyde:ferredoxin oxidoreductase 201 114 Op 6 . - CDS 196261 - 196887 361 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 - Term 197298 - 197338 8.2 202 115 Tu 1 . - CDS 197343 - 197552 221 ## LF82_2868 uncharacterized protein YdhZ - Prom 197641 - 197700 7.2 + Prom 197820 - 197879 8.3 203 116 Tu 1 . + CDS 198109 - 199521 1477 ## COG0469 Pyruvate kinase + Term 199551 - 199584 4.5 + Prom 199555 - 199614 5.7 204 117 Tu 1 . + CDS 199832 - 200068 331 ## COG4238 Murein lipoprotein + Term 200084 - 200126 11.2 - Term 200078 - 200108 4.3 205 118 Tu 1 . - CDS 200132 - 201136 738 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 201215 - 201274 2.8 206 119 Op 1 7/0.074 - CDS 201289 - 201702 468 ## COG2166 SufE protein probably involved in Fe-S center assembly 207 119 Op 2 24/0.000 - CDS 201715 - 202935 1278 ## COG0520 Selenocysteine lyase 208 119 Op 3 41/0.000 - CDS 202932 - 204203 1019 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 209 119 Op 4 41/0.000 - CDS 204178 - 204924 761 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 210 119 Op 5 12/0.037 - CDS 204934 - 205200 342 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 211 119 Op 6 3/0.574 - CDS 205254 - 206459 951 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 212 119 Op 7 . - CDS 206429 - 206797 498 ## COG0316 Uncharacterized conserved protein - Prom 206980 - 207039 4.5 - Term 207074 - 207124 12.4 213 120 Op 1 . - CDS 207345 - 207533 297 ## SbBS512_E1886 hypothetical protein - Prom 207558 - 207617 5.5 - Term 207545 - 207587 6.1 214 120 Op 2 6/0.148 - CDS 207633 - 208043 309 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 215 120 Op 3 . - CDS 208040 - 211096 2550 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 211232 - 211291 2.8 + Prom 211125 - 211184 2.9 216 121 Tu 1 . + CDS 211310 - 212422 1259 ## COG0628 Predicted permease + Term 212430 - 212462 6.3 + Prom 212666 - 212725 6.3 217 122 Op 1 . + CDS 212851 - 213207 212 ## EcE24377A_1905 hypothetical protein + Prom 213225 - 213284 2.6 218 122 Op 2 21/0.000 + CDS 213307 - 214521 879 ## COG0477 Permeases of the major facilitator superfamily + Prom 214539 - 214598 3.2 219 122 Op 3 4/0.463 + CDS 214748 - 216013 820 ## COG0477 Permeases of the major facilitator superfamily 220 122 Op 4 8/0.056 + CDS 216025 - 216891 869 ## COG0169 Shikimate 5-dehydrogenase 221 122 Op 5 3/0.574 + CDS 216922 - 217680 925 ## COG0710 3-dehydroquinate dehydratase + Prom 217694 - 217753 3.6 222 123 Tu 1 . + CDS 217824 - 217979 124 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase 223 124 Op 1 . + CDS 218102 - 219436 1319 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase 224 124 Op 2 . + CDS 219450 - 220601 1455 ## COG1960 Acyl-CoA dehydrogenases - Term 220590 - 220642 6.0 225 125 Tu 1 . - CDS 220644 - 221555 593 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 221671 - 221730 6.5 + Prom 221700 - 221759 6.1 226 126 Op 1 29/0.000 + CDS 221871 - 222635 778 ## COG2086 Electron transfer flavoprotein, beta subunit 227 126 Op 2 9/0.056 + CDS 222655 - 223593 1018 ## COG2025 Electron transfer flavoprotein, alpha subunit 228 126 Op 3 12/0.037 + CDS 223649 - 224938 1185 ## COG0644 Dehydrogenases (flavoproteins) 229 126 Op 4 2/0.796 + CDS 224935 - 225228 343 ## COG2440 Ferredoxin-like protein + Term 225241 - 225275 5.0 230 127 Tu 1 . + CDS 225285 - 226931 1160 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 226957 - 226991 2.5 - Term 226943 - 226979 6.1 231 128 Tu 1 . - CDS 226988 - 229366 2793 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase - Prom 229583 - 229642 8.0 + Prom 229547 - 229606 10.0 232 129 Op 1 . + CDS 229699 - 230532 775 ## COG1806 Uncharacterized protein conserved in bacteria + Prom 230578 - 230637 2.0 233 129 Op 2 . + CDS 230689 - 231735 864 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 231741 - 231776 5.8 + Prom 231779 - 231838 3.9 234 130 Tu 1 . + CDS 231867 - 232058 179 ## COG4256 Hemin uptake protein 235 131 Op 1 4/0.463 - CDS 232062 - 233498 1035 ## COG0397 Uncharacterized conserved protein 236 131 Op 2 5/0.259 - CDS 233561 - 234274 147 ## COG2200 FOG: EAL domain - Prom 234410 - 234469 4.3 - Term 234469 - 234508 11.1 237 132 Op 1 4/0.463 - CDS 234521 - 234985 273 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 238 132 Op 2 5/0.259 - CDS 235063 - 235800 617 ## COG4138 ABC-type cobalamin transport system, ATPase component 239 132 Op 3 5/0.259 - CDS 235812 - 236363 565 ## COG0386 Glutathione peroxidase 240 132 Op 4 4/0.463 - CDS 236426 - 237406 850 ## COG4139 ABC-type cobalamin transport system, permease component - Prom 237432 - 237491 3.8 - Term 237461 - 237489 2.1 241 133 Op 1 13/0.037 - CDS 237507 - 237806 318 ## PROTEIN SUPPORTED gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 242 133 Op 2 40/0.000 - CDS 237811 - 240198 2743 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 243 133 Op 3 13/0.037 - CDS 240213 - 241196 1241 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Prom 241380 - 241439 5.5 - Term 241603 - 241634 2.1 244 134 Op 1 46/0.000 - CDS 241646 - 242002 578 ## PROTEIN SUPPORTED gi|15802128|ref|NP_288150.1| 50S ribosomal protein L20 245 134 Op 2 36/0.000 - CDS 242055 - 242267 358 ## PROTEIN SUPPORTED gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 - Term 242292 - 242331 8.2 246 134 Op 3 16/0.000 - CDS 242349 - 242828 665 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 247 134 Op 4 . - CDS 242895 - 244763 1803 ## COG0441 Threonyl-tRNA synthetase - Prom 244815 - 244874 5.3 + Prom 245243 - 245302 6.1 248 135 Tu 1 1/0.833 + CDS 245346 - 246461 103 ## COG0666 FOG: Ankyrin repeat + Prom 246516 - 246575 2.8 249 136 Tu 1 . + CDS 246600 - 247244 261 ## COG0666 FOG: Ankyrin repeat + Prom 247331 - 247390 7.0 250 137 Tu 1 . + CDS 247420 - 247527 85 ## ECS88_1773 hypothetical protein + Term 247545 - 247587 -0.2 - Term 247535 - 247571 6.2 251 138 Tu 1 . - CDS 247580 - 248338 657 ## COG3137 Putative salt-induced outer membrane protein - Prom 248497 - 248556 12.1 + Prom 248482 - 248541 6.1 252 139 Tu 1 . + CDS 248625 - 249554 968 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 253 140 Tu 1 . + CDS 249655 - 249945 316 ## ECH74115_2442 hypothetical protein + Prom 249972 - 250031 3.4 254 141 Tu 1 . + CDS 250051 - 250911 782 ## COG3001 Fructosamine-3-kinase + Term 250929 - 250957 1.3 - Term 250917 - 250945 1.3 255 142 Tu 1 . - CDS 250952 - 251488 500 ## SDY_1819 hypothetical protein - Prom 251658 - 251717 3.3 + Prom 251520 - 251579 3.2 256 143 Tu 1 . + CDS 251635 - 252303 752 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 252305 - 252348 12.2 + Prom 252383 - 252442 4.5 257 144 Op 1 1/0.833 + CDS 252466 - 253056 322 ## COG1988 Predicted membrane-bound metal-dependent hydrolases 258 144 Op 2 . + CDS 253189 - 254580 1701 ## COG1823 Predicted Na+/dicarboxylate symporter + Term 254591 - 254635 8.6 259 145 Tu 1 . - CDS 254584 - 254871 121 ## JW1719 hypothetical protein - Prom 254954 - 255013 6.3 260 146 Tu 1 . - CDS 255031 - 255387 160 ## SF1498 hypothetical protein - Prom 255509 - 255568 6.8 - Term 255496 - 255540 -0.8 261 147 Tu 1 . - CDS 255676 - 255939 191 ## SSON_1427 cell division modulator - Prom 256095 - 256154 4.1 + Prom 255943 - 256002 2.9 262 148 Tu 1 . + CDS 256122 - 258383 2263 ## COG0753 Catalase + Term 258387 - 258437 13.6 - Term 258376 - 258422 13.3 263 149 Op 1 5/0.259 - CDS 258430 - 259188 579 ## COG3394 Uncharacterized protein conserved in bacteria 264 149 Op 2 4/0.463 - CDS 259201 - 260553 1541 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 265 150 Op 1 5/0.259 - CDS 260658 - 261497 753 ## COG2207 AraC-type DNA-binding domain-containing proteins 266 150 Op 2 13/0.037 - CDS 261508 - 261858 582 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 267 150 Op 3 10/0.056 - CDS 261909 - 263267 1603 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 263287 - 263346 4.4 - Term 263273 - 263306 1.4 268 150 Op 4 . - CDS 263352 - 263672 391 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 263779 - 263838 4.7 - Term 263905 - 263940 4.5 269 151 Tu 1 . - CDS 263971 - 264309 435 ## ECIAI39_1315 DNA-binding transcriptional activator OsmE - Prom 264410 - 264469 1.7 270 152 Tu 1 . + CDS 264511 - 265338 935 ## COG0171 NAD synthase + Term 265377 - 265416 8.2 + Prom 265486 - 265545 3.6 271 153 Tu 1 . + CDS 265568 - 266455 532 ## COG0322 Nuclease subunit of the excinuclease complex 272 154 Tu 1 . - CDS 266415 - 266990 312 ## COG3758 Uncharacterized protein conserved in bacteria - Prom 267080 - 267139 2.5 - Term 267107 - 267168 12.0 273 155 Tu 1 . - CDS 267193 - 267678 651 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 267789 - 267848 5.5 - Term 267968 - 268001 5.4 274 156 Op 1 5/0.259 - CDS 268008 - 268976 767 ## COG2988 Succinylglutamate desuccinylase 275 156 Op 2 7/0.074 - CDS 268969 - 270312 1131 ## COG3724 Succinylarginine dihydrolase 276 156 Op 3 8/0.056 - CDS 270309 - 271787 1188 ## COG1012 NAD-dependent aldehyde dehydrogenases 277 156 Op 4 7/0.074 - CDS 271784 - 272818 1066 ## COG3138 Arginine/ornithine N-succinyltransferase beta subunit 278 156 Op 5 . - CDS 272815 - 274035 1305 ## COG4992 Ornithine/acetylornithine aminotransferase - Prom 274235 - 274294 9.7 + Prom 274224 - 274283 5.3 279 157 Tu 1 . + CDS 274481 - 275287 823 ## COG0708 Exonuclease III + Prom 275375 - 275434 3.5 280 158 Op 1 . + CDS 275454 - 276164 687 ## COG0398 Uncharacterized conserved protein 281 158 Op 2 . + CDS 276169 - 276846 861 ## EcSMS35_1439 hypothetical protein 282 158 Op 3 3/0.574 + CDS 276864 - 277568 634 ## COG0398 Uncharacterized conserved protein 283 158 Op 4 2/0.796 + CDS 277568 - 278116 446 ## COG2128 Uncharacterized conserved protein 284 158 Op 5 3/0.574 + CDS 278126 - 279292 1035 ## COG4134 ABC-type uncharacterized transport system, periplasmic component 285 158 Op 6 3/0.574 + CDS 279310 - 280800 1333 ## COG4135 ABC-type uncharacterized transport system, permease component 286 158 Op 7 1/0.833 + CDS 280800 - 281453 200 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 287 158 Op 8 . + CDS 281520 - 282827 1280 ## COG2897 Rhodanese-related sulfurtransferase - Term 282773 - 282799 -1.0 288 159 Tu 1 . - CDS 282836 - 283456 466 ## COG0558 Phosphatidylglycerophosphate synthase - Prom 283498 - 283557 4.6 + Prom 283457 - 283516 4.7 289 160 Tu 1 . + CDS 283543 - 283950 364 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 290 161 Tu 1 . - CDS 283916 - 284188 91 ## SSON_1396 hypothetical protein - Prom 284375 - 284434 2.7 + Prom 284300 - 284359 4.1 291 162 Tu 1 . + CDS 284424 - 285767 1495 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Term 285605 - 285634 -0.2 292 163 Tu 1 . - CDS 285884 - 286924 258 ## ECIAI1_1823 hypothetical protein - Prom 286949 - 287008 6.3 - Term 286965 - 287015 9.8 293 164 Op 1 5/0.259 - CDS 287052 - 289013 1737 ## COG0550 Topoisomerase IA 294 164 Op 2 6/0.148 - CDS 289018 - 290061 1220 ## COG0709 Selenophosphate synthase - Prom 290083 - 290142 2.2 295 165 Tu 1 . - CDS 290178 - 290729 604 ## COG0778 Nitroreductase - Prom 290755 - 290814 4.9 + Prom 290554 - 290613 3.0 296 166 Op 1 . + CDS 290783 - 290947 85 ## ECUMN_2054 hypothetical protein 297 166 Op 2 4/0.463 + CDS 290890 - 292746 1881 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 292759 - 292795 7.2 + Prom 292829 - 292888 3.4 298 167 Op 1 2/0.796 + CDS 292913 - 293929 1011 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 299 167 Op 2 . + CDS 293940 - 294581 574 ## COG1335 Amidases related to nicotinamidase + Term 294619 - 294667 -0.9 300 168 Op 1 3/0.574 - CDS 294742 - 295014 306 ## COG3139 Uncharacterized protein conserved in bacteria 301 168 Op 2 . - CDS 295056 - 295469 237 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase + Prom 295577 - 295636 7.0 302 169 Op 1 4/0.463 + CDS 295811 - 296806 1086 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 296833 - 296862 2.1 + Prom 296810 - 296869 3.5 303 169 Op 2 . + CDS 296890 - 297774 952 ## COG0676 Uncharacterized enzymes related to aldose 1-epimerase - Term 297682 - 297714 0.1 304 170 Op 1 3/0.574 - CDS 297825 - 298679 808 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Term 298705 - 298733 3.0 305 170 Op 2 . - CDS 298769 - 299515 880 ## COG3713 Outer membrane protein V - Prom 299689 - 299748 4.0 306 171 Tu 1 . + CDS 299951 - 301885 2051 ## COG2766 Putative Ser protein kinase 307 172 Tu 1 . + CDS 301998 - 303281 947 ## PROTEIN SUPPORTED gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 + Term 303287 - 303325 5.2 + Prom 303312 - 303371 4.7 308 173 Tu 1 . + CDS 303560 - 304903 800 ## COG2199 FOG: GGDEF domain + Term 304921 - 304951 1.0 + Prom 304910 - 304969 2.7 309 174 Tu 1 . + CDS 305102 - 305708 471 ## APECO1_854 hypothetical protein Predicted protein(s) >gi|299857062|gb|ADWS01000002.1| GENE 1 27 - 551 229 174 aa, chain - ## HITS:1 COG:ycjL KEGG:ns NR:ns ## COG: ycjL COG2071 # Protein_GI_number: 16129259 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Escherichia coli K12 # 1 160 9 168 258 314 99.0 7e-86 MNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIALPHALAEPSLLEQLLPKLDG IYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMALINAALERRIPIFAICRGLQELVVAT GGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQVEEGDYCLRCYLNVATFG >gi|299857062|gb|ADWS01000002.1| GENE 2 775 - 2193 1179 472 aa, chain + ## HITS:1 COG:ycjK KEGG:ns NR:ns ## COG: ycjK COG0174 # Protein_GI_number: 16129258 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Escherichia coli K12 # 1 472 27 498 498 971 100.0 0 METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSS LKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQM LLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCA PGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN VLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDAE GEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPC GDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQ SDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA >gi|299857062|gb|ADWS01000002.1| GENE 3 2496 - 3881 1497 461 aa, chain + ## HITS:1 COG:ECs1873 KEGG:ns NR:ns ## COG: ECs1873 COG0531 # Protein_GI_number: 15831127 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 461 19 479 479 858 99.0 0 MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYL LALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLL AKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQ GLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPK AIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVN TLASGLASHASVSRLLYVMGRDNVFPERVFGYVHPKWRTPALNVIMVGIVAMSALFFDLV TATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKEHFHYLLMPLVGALTVGVLWINLE ATSLTLGLVWASLGGAYLWYLIRRYRKVPLYEGDRTPVSET >gi|299857062|gb|ADWS01000002.1| GENE 4 4015 - 4260 302 81 aa, chain + ## HITS:1 COG:no KEGG:SDY_1637 NR:ns ## KEGG: SDY_1637 # Name: ymjA # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 81 1 81 81 144 100.0 1e-33 MNHDIPLKYFDIADEYATECAEPVADAERTPLAHYFQLLLTRLMNNEEISEEAQHEMAAE AGINPVRIDEIAEFLNQWGNE >gi|299857062|gb|ADWS01000002.1| GENE 5 4573 - 6216 1468 547 aa, chain + ## HITS:1 COG:sapA KEGG:ns NR:ns ## COG: sapA COG4166 # Protein_GI_number: 16129255 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 547 1 547 547 1075 99.0 0 MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQVNTFNPSKASSGLIVDT LAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRRDVPFQKTDWFTPTRKMNA DDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSVRKLDNHTVEFRLAQPDASFL WHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPYQLSEYRAGQFIRLQRHDDFWRG KPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAASQLSILRDDPRLRLTLRPGMNVAYL AFNTAKPPLNNPAVRHALALAINNQRLMQSIYYGTAETAASILPRASWAYDNEAKITEYN PAKSREQLKALGLENLTLKLWVPTRSQAWNPSPLKTAELIQADMAQVGVKVVIVPVEGRF QEARLMDMSHDLTLSGWATDSNDPDSFFRPLLSCAAIHSQTNLAHWCDPKFDSVLRKALS SQQLAARIEAYDEAQSILAQELPILPLASSLRLQAYRYDIKGLVLSPFGNASFAGVYREK QDEVKKP >gi|299857062|gb|ADWS01000002.1| GENE 6 6213 - 7178 591 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 1 318 1 317 320 232 35 2e-59 MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAWVFWFNGLIHWDFGVSS INGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGITRHKWQDNLINAIALLGFS IPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFALIDAWLSDSPWRAEMIMSAI RHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRGLSRFTILRRHVLHNALPP VIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVCGSLVIIVNV ISDILGAMANPLKHKEWYALR >gi|299857062|gb|ADWS01000002.1| GENE 7 7165 - 8055 883 296 aa, chain + ## HITS:1 COG:sapC KEGG:ns NR:ns ## COG: sapC COG4171 # Protein_GI_number: 16129253 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Escherichia coli K12 # 1 296 1 296 296 535 99.0 1e-152 MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLG YQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFA GATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSM VHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLITEITRALSMAILDIAALGFLDLG AQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE >gi|299857062|gb|ADWS01000002.1| GENE 8 8055 - 9047 468 330 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 14 321 31 324 329 184 37 3e-45 MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDN WRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWT YKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLL IADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQTVET APSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGPRCPY AQRECIVTPRLTGAKNHLYACHFPLNMEKE >gi|299857062|gb|ADWS01000002.1| GENE 9 9037 - 9855 448 272 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 256 3 263 329 177 35 6e-43 RKSEMIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTL AKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLR LNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADE ALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTA DVLASPLHELTKRLIAGHFGEALTADAWRKDR >gi|299857062|gb|ADWS01000002.1| GENE 10 9926 - 10276 104 116 aa, chain + ## HITS:1 COG:ycjD KEGG:ns NR:ns ## COG: ycjD COG2852 # Protein_GI_number: 16129250 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 116 2 117 117 209 93.0 9e-55 MDKIKSNARDLRRNLTLQERKLWRYLRSRRFGDFKFRRQHPVGSYILDFACCSARVVVEL DGGQHDLAVAYDTRRTSWLESQSWTVLRFWHNEIDCNEEAVLEIILQELNRRSPSP >gi|299857062|gb|ADWS01000002.1| GENE 11 10644 - 11432 1060 262 aa, chain + ## HITS:1 COG:ECs1861 KEGG:ns NR:ns ## COG: ECs1861 COG0623 # Protein_GI_number: 15831115 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 506 100.0 1e-143 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDIS SYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI SGEVVHVDGGFSIAAMNELELK >gi|299857062|gb|ADWS01000002.1| GENE 12 11577 - 12704 332 375 aa, chain + ## HITS:1 COG:yciW_1 KEGG:ns NR:ns ## COG: yciW_1 COG4950 # Protein_GI_number: 16129248 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 210 27 236 236 405 95.0 1e-113 MEQRHITGKSHWYHETQSSTAEYDVLPLVPEAAKVSDPFLLDVILDEETLAPFLSWLVPA RVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSSRE SNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAGDCVIINQIIGFIGFQARTIATF QAYLGHPVRWLPGLEIQNYADASLFADESIRWRSSYEVEKLPEEYTKSSTAELCQLAETL SLHPISLSLLERLLNSTRVNTQPDNKLAALLCARINGSPACFAACMDSSNEYKKISPLLR KGENEINQWADRHSVEHATVQAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGL CGWINRLKIALGETY >gi|299857062|gb|ADWS01000002.1| GENE 13 12772 - 14706 2003 644 aa, chain + ## HITS:1 COG:ECs1859 KEGG:ns NR:ns ## COG: ECs1859 COG4776 # Protein_GI_number: 15831113 # Func_class: K Transcription # Function: Exoribonuclease II # Organism: Escherichia coli O157:H7 # 1 644 1 644 644 1280 99.0 0 MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI IAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPDHPLLKDAIPCRAARGLNH EFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT EMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSK LDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDNIEF FAATIESKAKLVYDQVSDWLENTGDWQPESEAIAEQVRLLAQICQRRGEWRHNHALVFKD RPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFD PANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRM AERDVGDWLYARFLKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAMRDE LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA >gi|299857062|gb|ADWS01000002.1| GENE 14 14942 - 16927 1060 661 aa, chain + ## HITS:1 COG:yciR_3 KEGG:ns NR:ns ## COG: yciR_3 COG2200 # Protein_GI_number: 16129246 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 401 661 1 261 261 530 100.0 1e-150 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR A >gi|299857062|gb|ADWS01000002.1| GENE 15 17074 - 17247 236 57 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1446 NR:ns ## KEGG: EC55989_1446 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 57 15 71 71 105 100.0 4e-22 MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVAESTPDIPKAPWEI >gi|299857062|gb|ADWS01000002.1| GENE 16 17337 - 18086 667 249 aa, chain + ## HITS:1 COG:ECs1857 KEGG:ns NR:ns ## COG: ECs1857 COG1349 # Protein_GI_number: 15831111 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 249 1 249 249 480 100.0 1e-135 MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKLSYLRRAHGFAVSLDSD DVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSSY IAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHFSKAFIGIDGWQPETGFTGRD MMRTDVVNAVLEKECEAIVLTDSSKFGAVHSYSIGPVERFNRVITDSKIRASDLMHLEHS KLTVHVVDI >gi|299857062|gb|ADWS01000002.1| GENE 17 18355 - 18573 344 72 aa, chain + ## HITS:1 COG:no KEGG:G2583_1624 NR:ns ## KEGG: G2583_1624 # Name: osmB # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 72 1 72 72 74 100.0 1e-12 MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGA AVGGVIGHQVGK >gi|299857062|gb|ADWS01000002.1| GENE 18 18699 - 19025 464 108 aa, chain - ## HITS:1 COG:yciH KEGG:ns NR:ns ## COG: yciH COG0023 # Protein_GI_number: 16129243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 1 (eIF-1/SUI1) and related proteins # Organism: Escherichia coli K12 # 1 108 2 109 109 177 100.0 5e-45 MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAEL TKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG >gi|299857062|gb|ADWS01000002.1| GENE 19 19025 - 19762 648 245 aa, chain - ## HITS:1 COG:pyrF KEGG:ns NR:ns ## COG: pyrF COG0284 # Protein_GI_number: 16129242 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Escherichia coli K12 # 1 245 1 245 245 454 99.0 1e-128 MTLTASSSSRAVTNSPVVVALDYHNRDDALSFVDKIDPRDCRLKVGKEMFTLFGPQFVRE LQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKD APLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVF GQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINAS LQRSA >gi|299857062|gb|ADWS01000002.1| GENE 20 19954 - 21123 1129 389 aa, chain - ## HITS:1 COG:ECs1853 KEGG:ns NR:ns ## COG: ECs1853 COG2956 # Protein_GI_number: 15831107 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosaminyl transferase # Organism: Escherichia coli O157:H7 # 10 389 10 389 389 721 100.0 0 MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVNFLLSNQQDKAVDLFLD MLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAIQQLGRDYMAA GLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIA HFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRV ISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAVEENTGADAELMLADIIEARDGSEA AQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEKVRSKPRYRCQKC GFTAYTLYWHCPSCRAWSTIKPIRGLDGL >gi|299857062|gb|ADWS01000002.1| GENE 21 21130 - 21438 201 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133578|ref|ZP_00203203.1| COG3771: Predicted membrane protein [Haemophilus influenzae R2866] # 1 89 2 90 97 82 35 3e-14 MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLIC GLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE >gi|299857062|gb|ADWS01000002.1| GENE 22 21587 - 22351 380 254 aa, chain - ## HITS:1 COG:ECs1851 KEGG:ns NR:ns ## COG: ECs1851 COG0671 # Protein_GI_number: 15831105 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 446 100.0 1e-125 MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLIL FGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDE FYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWP RRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPP AEENREIAQREQES >gi|299857062|gb|ADWS01000002.1| GENE 23 22521 - 23111 649 196 aa, chain + ## HITS:1 COG:ECs1850 KEGG:ns NR:ns ## COG: ECs1850 COG0807 # Protein_GI_number: 15831104 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 403 100.0 1e-112 MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDAL FSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQ LGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNE HYLDTKAEKMGHLLNK >gi|299857062|gb|ADWS01000002.1| GENE 24 23175 - 25850 2430 891 aa, chain - ## HITS:1 COG:acnA KEGG:ns NR:ns ## COG: acnA COG1048 # Protein_GI_number: 16129237 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 891 1 891 891 1795 99.0 0 MSSTLREASKDTLQAKDKTYHYYSLPLAAKSLGDITRLPKSLKVLLENLLRWQDGNSVTE EDIHALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVKRLGGDTAKVNPL SPVDLVIDHSVTVDRFGDDEAFEENVRLEMERNHERYVFLKWGKQAFSRFSVVPPGTGIC HQVNLEYLGKAVWSELQDGEWIAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQ PVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADR ATIANMSPEYGATCGFFPIDAVTLDYMRLSGRSEDQVELVEKYAKAQGMWRNPGDEPIFT STLELDMNDVEASLAGPKRPQDRVALPDVPKAFAASNELEVNATHKDRQPVDYVMNGHQY QLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYL AKAKLTPYLDELGFNLVGYGCTTCIGNSGPLPDPIETAIKKGDLTVGAVLSGNRNFEGRI HPLVKTNWLASPPLVVAYALAGNMNINLASEPIGHDRKGDPVYLKDIWPSAQEIARAVEQ VSTEMFRKEYAEVFEGTAEWKEINVTRSDTYGWQEDSTYIRLSPFFDEMQATPAPVEDIH GARILAMLGDSVTTDHISPAGSIKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGT FANIRIRNEMVPGVEGGMTRHLPDSDVVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDW AAKGPRLLGIRVVIAESFERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEEKIDIGDLQN LQPGATVPVTLTRADGSQEVVPCRCRIDTATELTYYQNDGILHYVIRNMLK >gi|299857062|gb|ADWS01000002.1| GENE 25 26014 - 26109 64 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MINTNMKYWSWMGAFSLSMLFWAELLWIITH >gi|299857062|gb|ADWS01000002.1| GENE 26 26223 - 26390 135 55 aa, chain - ## HITS:1 COG:no KEGG:SSON_1865 NR:ns ## KEGG: SSON_1865 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 55 5 59 59 80 100.0 1e-14 MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFIELFAEDDQPKQ >gi|299857062|gb|ADWS01000002.1| GENE 27 26393 - 26521 68 42 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1434 NR:ns ## KEGG: EC55989_1434 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 42 13 54 54 73 100.0 2e-12 MPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG >gi|299857062|gb|ADWS01000002.1| GENE 28 26852 - 27826 809 324 aa, chain - ## HITS:1 COG:ECs1847 KEGG:ns NR:ns ## COG: ECs1847 COG0583 # Protein_GI_number: 15831101 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 647 100.0 0 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV DAAVALRSNEEIEVMFKDIKLPEK >gi|299857062|gb|ADWS01000002.1| GENE 29 28036 - 30633 2640 865 aa, chain - ## HITS:1 COG:topA_1 KEGG:ns NR:ns ## COG: topA_1 COG0550 # Protein_GI_number: 16129235 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Escherichia coli K12 # 1 592 1 592 592 1167 100.0 0 MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPK KDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA WHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVNAQQARRFMDRVVGYMVS PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDASTTTPSGEALALQVTH QNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPTTSKPGAPFITSTLQQAASTRLGFG VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYASKEN SQEAHEAIRPSDVNVMAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDF RLKARGRILRFDGWTKVMPALRKGDEDRILPAVNKGDALTLVELTPAQHFTKPPARFSEA SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY DFTAQMENSLDQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGEDAETNALRAKR RCPKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL KMGRFGKYMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYV SSEKDGKATGWSAFYVDGKWVEGKK >gi|299857062|gb|ADWS01000002.1| GENE 30 30865 - 31035 58 56 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1410 NR:ns ## KEGG: ECS88_1410 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 6 56 1 51 51 88 98.0 8e-17 MGCVSLFIIYSLNKDISLRQAWLADKYTTLVARAPYWQLWILHANKVAYRILSGTV >gi|299857062|gb|ADWS01000002.1| GENE 31 31013 - 31264 400 83 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1292 NR:ns ## KEGG: ECIAI1_1292 # Name: yciN # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 83 1 83 83 158 100.0 7e-38 MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAK STAVFNMFKHLAHVLSEKYHLVD >gi|299857062|gb|ADWS01000002.1| GENE 32 31300 - 32364 1053 354 aa, chain - ## HITS:1 COG:sohB KEGG:ns NR:ns ## COG: sohB COG0616 # Protein_GI_number: 16129233 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli K12 # 1 354 1 349 349 587 96.0 1e-167 MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRVNNLSEQYKEMKEELAA ALMDSHQQKQWHKAQKKKHKQEAKAAKAKAAKAKAKLGEVATDSKPRVWVLDFKGSMDAH EVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKV AASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTL LGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVATGEHWYGQQAVEKGLVDEIN TSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESADRLLLRWWQRGQKPLM >gi|299857062|gb|ADWS01000002.1| GENE 33 32584 - 33342 691 252 aa, chain + ## HITS:1 COG:yciK KEGG:ns NR:ns ## COG: yciK COG1028 # Protein_GI_number: 16129232 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 252 1 252 252 493 98.0 1e-139 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET GRQPQWFILDLLTCTSEDCQQLAQRIVVNYPRLDGVLHNAGLLGDICPMSEQNPQVWQDV MQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA DEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTF DAQPGRKPGISQ >gi|299857062|gb|ADWS01000002.1| GENE 34 33339 - 33929 622 196 aa, chain + ## HITS:1 COG:btuR KEGG:ns NR:ns ## COG: btuR COG2109 # Protein_GI_number: 16129231 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Escherichia coli K12 # 1 196 1 196 196 389 99.0 1e-108 MSDERYQQRQQRVKEKVDARVAQAQDERGIIIVFTGNGKGKTTAAFGTATRAVGHGKKVG VVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWDTQNRESDTAACREVWQHAKRMLADSS LDMVLLDELTYMVAYDYLPLEEVVQALNERPHQQTVIITGRGCHRDILELADTVSELRPI KHAFDAGVKAQIGIDY >gi|299857062|gb|ADWS01000002.1| GENE 35 33969 - 34841 1173 290 aa, chain - ## HITS:1 COG:ECs1841 KEGG:ns NR:ns ## COG: ECs1841 COG1187 # Protein_GI_number: 15831095 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 539 100.0 1e-153 MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVR ESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFT TDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGI NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYL RELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNG >gi|299857062|gb|ADWS01000002.1| GENE 36 34942 - 35562 731 206 aa, chain - ## HITS:1 COG:ECs1839 KEGG:ns NR:ns ## COG: ECs1839 COG0009 # Protein_GI_number: 15831093 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Escherichia coli O157:H7 # 1 206 13 218 218 419 100.0 1e-117 MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLP DGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIG MRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQK PTTVIDLTDDTPVVVREGVGDVKPFL >gi|299857062|gb|ADWS01000002.1| GENE 37 35559 - 36440 356 293 aa, chain - ## HITS:1 COG:yciV KEGG:ns NR:ns ## COG: yciV COG0613 # Protein_GI_number: 16129227 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Escherichia coli K12 # 1 293 1 293 293 582 100.0 1e-166 MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISR SGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQLIAERLEK AQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVPPQWCTI EQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLA ALARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL >gi|299857062|gb|ADWS01000002.1| GENE 38 36714 - 38276 1638 520 aa, chain + ## HITS:1 COG:ECs1836 KEGG:ns NR:ns ## COG: ECs1836 COG0147 # Protein_GI_number: 15831090 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Escherichia coli O157:H7 # 1 520 1 520 520 1027 98.0 0 MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADIDSKDDLKSLLLVDSALR ITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQLPNCRVLRFPPVSPLLDEDARLCS LSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFEDLPQLSAENNCPDFCFYLAET LMVIDHQKKSTRIQASLFAPNEEEKQRLTARLNELRQQLTEAAPPLPVVSVPHMRCECNQ SDEEFGGVVRLLQKAIRAGEIFQVVPSRRFSLPCPSPLAAYYVLKKSNPSPYMFFMQDND FTLFGASPESSLKYDATSRQIEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELS EHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRAC MNMGTLSGAPKVRAMQLIAEAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATV QAGAGVVLDSIPQSEADETRNKARAVLRAIATAHHAQETF >gi|299857062|gb|ADWS01000002.1| GENE 39 38276 - 39871 1505 531 aa, chain + ## HITS:1 COG:trpD_2 KEGG:ns NR:ns ## COG: trpD_2 COG0547 # Protein_GI_number: 16129224 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Escherichia coli K12 # 197 531 1 335 335 603 100.0 1e-172 MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERLATMSNPVLMLSPGPGV PSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMF AGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESILTTQGA RLLEQTLAWAQQKLEPANTLQPILEKLYQAQTLSQQESHQLFSAVVRGELKPEQLAAALV SMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAAC GLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHA MPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGG MDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQEQLAGGTPEENRDILTRLLQGKG DAAHEAAVAANVAMLMRLHGHEDLQANAQTVLEVLRSGSAYDRVTALAARG >gi|299857062|gb|ADWS01000002.1| GENE 40 39875 - 41233 1123 452 aa, chain + ## HITS:1 COG:ZtrpC_1 KEGG:ns NR:ns ## COG: ZtrpC_1 COG0134 # Protein_GI_number: 15801916 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Escherichia coli O157:H7 EDL933 # 1 253 2 254 254 498 98.0 1e-140 MQTVLAKIVADKAIWVETRKQQQPLASFQNEVQPSTRHFYDALQGARTAFILECKKASPS KGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFDFLPIVSQIAPQPILCKDFIIDP YQIYLARYYQADACLLMLSVLDDEQYRQLAAVAHSLEMGVLTEVSNEEELERAIALGAKV VGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSALM AHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVM AAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNEDQLYIDTLREALPAHVAIWKALS VGETLPARELQHVDKYVLDNGQGGSGQRFDWSLLNGQSLGNVLLAGGLGADNCVEAAQTG CTGLDFNSAVESQPGIKDARLLASVFQTLRAY >gi|299857062|gb|ADWS01000002.1| GENE 41 41245 - 42438 1290 397 aa, chain + ## HITS:1 COG:trpB KEGG:ns NR:ns ## COG: trpB COG0133 # Protein_GI_number: 16129222 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Escherichia coli K12 # 1 397 1 397 397 796 100.0 0 MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQFNDLLKNYAGRPTALT KCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASA LASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGS YETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGM FADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSI SAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALK MMRENPDKEQLLVVNLSGRGDKDIFTVHDILKARGEI >gi|299857062|gb|ADWS01000002.1| GENE 42 42438 - 43244 392 268 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 249 1 248 263 155 35 2e-36 MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLAD GPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMYANLVFNKGIDEFYAQCEK VGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRA GVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKI IEQHINEPEKMLAALKVFVQPMKAATRS >gi|299857062|gb|ADWS01000002.1| GENE 43 43625 - 43804 214 59 aa, chain + ## HITS:1 COG:STM1728 KEGG:ns NR:ns ## COG: STM1728 COG3729 # Protein_GI_number: 16765072 # Func_class: R General function prediction only # Function: General stress protein # Organism: Salmonella typhimurium LT2 # 1 55 1 55 60 58 89.0 4e-09 MAEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAGKKGGQQSGGNKSGKS >gi|299857062|gb|ADWS01000002.1| GENE 44 43890 - 44390 597 166 aa, chain + ## HITS:1 COG:ECs1830 KEGG:ns NR:ns ## COG: ECs1830 COG3685 # Protein_GI_number: 15831084 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 234 100.0 7e-62 MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQ VVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL ATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLALNNVNKKAENKA >gi|299857062|gb|ADWS01000002.1| GENE 45 44436 - 44942 614 168 aa, chain + ## HITS:1 COG:ECs1829 KEGG:ns NR:ns ## COG: ECs1829 COG3685 # Protein_GI_number: 15831083 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 168 1 168 168 309 99.0 1e-84 MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETIL DRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAAKN AGDTVSIPIIEAILNEEKQMADWLIQHIPQTTEKFLIRSETDGVEAKK >gi|299857062|gb|ADWS01000002.1| GENE 46 45002 - 45109 75 35 aa, chain - ## HITS:1 COG:ompW KEGG:ns NR:ns ## COG: ompW COG3047 # Protein_GI_number: 16129217 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Escherichia coli K12 # 1 35 178 212 212 75 100.0 2e-14 MDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF >gi|299857062|gb|ADWS01000002.1| GENE 47 45585 - 46142 277 185 aa, chain + ## HITS:1 COG:PM1774 KEGG:ns NR:ns ## COG: PM1774 COG3646 # Protein_GI_number: 15603639 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Pasteurella multocida # 12 117 27 128 239 83 43.0 2e-16 MNTAITFSNESPKVFFKDGRLVTTSQAVADYFDKQHKHVLAKIDTLDCSPEFTSANFSAD VQTVEIGNGAERESRCYLITKDGFMFLVMGFTGKKAARLKEAYIEKFNAMEEELHKRPPA AQNSPAPNNGCALLIHFDKHGQVEFTEKVPADAMVCTLERFKFYLEQHGWIVARKEQLVE RLMRF >gi|299857062|gb|ADWS01000002.1| GENE 48 46554 - 46823 145 89 aa, chain - ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 27 89 185 247 247 97 82.0 6e-21 MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLE AWNKYRVLLNRVDTSTAPDIEWPANPVRE >gi|299857062|gb|ADWS01000002.1| GENE 49 46892 - 47548 -36 218 aa, chain + ## HITS:1 COG:Z1925 KEGG:ns NR:ns ## COG: Z1925 COG0500 # Protein_GI_number: 15801385 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 EDL933 # 1 218 5 222 222 444 99.0 1e-125 MKKNTDDGAKIYTPLTLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHVGNNHLDIGVGT GFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISM FYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIF SNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK >gi|299857062|gb|ADWS01000002.1| GENE 50 47603 - 48187 290 194 aa, chain - ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 50 194 103 247 247 277 96.0 1e-74 MAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNS DEASWHLVEDHRGKTVYDVASGDELFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEA EKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEETSLLEAWKKYRVLLNRVDTS TAPDIEWPTNPVRE >gi|299857062|gb|ADWS01000002.1| GENE 51 48187 - 51213 723 1008 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1364 NR:ns ## KEGG: ECUMN_1364 # Name: not_defined # Def: side tail fiber protein from bacteriophage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 1008 1 1008 1008 1027 99.0 0 MTVKISGVLKDGTGKPVQNCTIVLKARRTSSTVVVNTVASENPDEAGRYSMDVEHGQYSV TLLVEGFPPSHAGTITVYEGSRSGTLNDFLGAMTEDDVRPEALRRFEQMVEEVSRNASAV AQNTAAAKKSASDASASASEAATHATDAAASARAASTSAGQAASSAQSASSSAGTASTKT REAAKSAAAAESSKSAAATSASAAKTSETNAAASQKSAATSASTATTKASEAATSARGAA TSKEAAKSSETNASSSASSAASSATAAGNSAKAAKTSETNAKSSETAAGQSASAAAGSKT AAALSASAASTSAGQASASATAAGKSAESAASSASTATTKAGKATEQATAAARSASAAKT SETNAKTSADNAASSKAAAASSASSAASSASSASASKDEATRQASAAKGSATTATTKASE AAGSATAASQSKVAAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNSTSE KLAATPKAVKTVKDSSVQKTGDTMGGQLKISTINALRIFNQAFGLIFRRSEDHLHLIPTN EGEGENGDIGSLRPFSINLRSGLVSIGNGLKVGGSVTGNLTGNADTATKIKTARKIGGVA FDGSADINLPGVNATGNQNTTGNAATATKLQAARTINGVSFDGSANITLTPSNIGALALT GGTLSGGLTAAGEVISRSANGLRIAYGNYGFFIRNDGSNTYFMLTDSGNSLGTHNSLRPF IISNHTGNVTIATKLNASGGITGSLSGNASTATKLQTARTINGVKFDGSANIEAFPPGVP LPWPSDTPPAGYAIMQGQTFDKAAYPKLAIAYPSGVIPDMRGWTIKGKPASGRAVLSQEQ DGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSLSGSTGSAGVHTHGNGIRW PGGGGSALAFYDGGGFTYVQNSQYQVSPETSSYRSYYQRIQTQSAGAHTHSLSGTAASSG AHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA >gi|299857062|gb|ADWS01000002.1| GENE 52 51364 - 51963 570 199 aa, chain - ## HITS:1 COG:ECs1807 KEGG:ns NR:ns ## COG: ECs1807 COG3637 # Protein_GI_number: 15831061 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Escherichia coli O157:H7 # 1 199 1 199 199 353 97.0 9e-98 MRKLCAVILSAVVWQVAAATPASAAEHQSTLSAGYLHASTNVPGSDDLNGINVKYRYEFT DALGLITSFSYANAEDEQKTRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMVGVA YSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVTIDLAYEG SGSGDWRTDAFIVGIGYRF >gi|299857062|gb|ADWS01000002.1| GENE 53 52031 - 55504 2327 1157 aa, chain - ## HITS:1 COG:ECs1806 KEGG:ns NR:ns ## COG: ECs1806 COG4733 # Protein_GI_number: 15831060 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 1157 1 1158 1158 2209 94.0 0 MGKGGGKAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPV IHGVTAVWRAGEQEQTPPEGFESSGAETGLGVEVTKAKPVTRTITSANIDRLRVTFGVQS LVETTSKGDRNPATVRLLIQLQRNGNWVTEKDVTINGKTTSQFLASVILDNLPPRPFNIR MVRETADSTTDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRG RIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWA LYAIGQYCDQTVPDGFGGTEPRMTFNAYLAQQRKAWDVLSDFCSAMRCMPVWNGQTLTFV QDRPSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDP EAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTELLETQTVDFTLGSQGLRHTPGDIIE ICDNDYAGTLTGGRVLSIDAATRTLTLDREVTLPETGAATVNLINGSGKPVSVDITEHPA PDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSVRENTDGTFAITAVQHVPEKEAIVD NGARFEPQSGSLNSVIPPAVQHLTVEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGKG TDARLVTTAITADTEHRFSGLPLGEYTLTVRAINSYGQQGEPATTTFRINAPAKPATIEL TPGYFQITATPHLAVYDPTVQFEFWFSEKRIADIRQVETAARYLGSALYWIAASINIKPG HDYYFYIRSVNTVGKSAFVEAVGRASDDAEGYLDFFKGEIGKTHLAQELWTQIDNGQLAP DLAEIRTSITNVSNEITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMQDGR LYIAGIGAGIENTPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNEVFLKYLT APTITSGGNPPAFSLTPDGRLTAKNADISGNVNANSGTLNNVTINENCRVLGKLSANQIE GDLVKTVGKAFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFSGAKHEKEHTDIY SSCRLIVRKNGAEIYNRTALDNTLIYSGVIDMPAGHGHMTLEFSVSAWLVNNWYPTASIS DLLVVVMKKATAGITIS >gi|299857062|gb|ADWS01000002.1| GENE 54 55848 - 56528 469 226 aa, chain - ## HITS:1 COG:ECs1118 KEGG:ns NR:ns ## COG: ECs1118 COG4723 # Protein_GI_number: 15830372 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 226 1 226 226 408 97.0 1e-114 MATTNAFCLASPPLARICLHGDLQRFGRRLSLYVNTAAEAIRALSMQMPGFRRQMNEGWY QIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGG SMALWGTALSAGGFSATTMLFSLGASMILGGVAQMLAPKAKTPDYRATDNGRQNTYFSSL DNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG >gi|299857062|gb|ADWS01000002.1| GENE 55 56426 - 57169 143 247 aa, chain - ## HITS:1 COG:ECs2946_2 KEGG:ns NR:ns ## COG: ECs2946_2 COG0791 # Protein_GI_number: 15832200 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli O157:H7 # 104 246 1 143 144 288 95.0 8e-78 MTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQ GEIVALVHSHPGGLPWLSEADRRLQIKSALPWWLVCRGDIHKFRCVPHLTGRRFEHGVTD CYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLYLDNMAVTGFYRVPLSSAQAGDILLCCF GASVPNHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAFTGICNDL AAASACM >gi|299857062|gb|ADWS01000002.1| GENE 56 57180 - 57878 604 232 aa, chain - ## HITS:1 COG:ECs1985 KEGG:ns NR:ns ## COG: ECs1985 COG4672 # Protein_GI_number: 15831239 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 1 232 1 232 232 457 96.0 1e-129 MQDIHEESLNESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNEKGEPVTWQGREYQAYP IEGSGFEMNGKGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVA GNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDGALFPGRIMLANTCMWTYRSD ECGYTGGAVADEFDKPTTDIRKDRCSKCMRGCELRRNVGNFGGFLSINKLSQ >gi|299857062|gb|ADWS01000002.1| GENE 57 57878 - 58207 157 109 aa, chain - ## HITS:1 COG:ECs2165 KEGG:ns NR:ns ## COG: ECs2165 COG4718 # Protein_GI_number: 15831419 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 213 100.0 7e-56 MKTFRWKVKPDMEVNSQPSVREVRFGDGYSQRMAAGLNADLKTYRVTLSVTREEARHLEA FLAEHGGWKAFLWKPPYAYRQIKVTCAGWSARVGMLRVEFSAEFKQVVN >gi|299857062|gb|ADWS01000002.1| GENE 58 58204 - 60777 2265 857 aa, chain - ## HITS:1 COG:Z2140 KEGG:ns NR:ns ## COG: Z2140 COG5281 # Protein_GI_number: 15801577 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Escherichia coli O157:H7 EDL933 # 1 857 1 859 859 1347 94.0 0 MSQPVGDLVIDLSLDAVRFDEQMSRVRRHFSGLDTDARKTASAVEQGLSRQALAAQKAGI SVGQYKAAMRTLPAQFTDIATQLAGGQNPWLILLQQGGQVKDSFGGMIPMFRGLAGAITL PMVGVTSLAVATGALVYAWYQGDSTLSAFNKTLVLSGNQSGLTADRMLTLSRAGQAAGLT FNQARESLAALVNAGVRGGEQFDAINQSVARFASASGVEVDKVAEAFGKLTTDPTSGLMA MARQFRNVTAEQIAYVAQLQRSGDEAGALQAANDIATKGFDEQTRRLKENMGTLETWADK TGKAFKSMWDAILDIGRPESSADMLASAQKAFDEADKKWQWYQSRSQRRGKTSSFRANLQ GAWDDRENARLGLAAATLQSDMEKAGELAARDRAEREASQLKYTGEAQKAYERLQTPLDK YTARQKELNKALKDGKILQADYNTLMASAKKDYESTLKKPSGVKVSAGERQEDRAHAAML ALETELRTLEKHSGVNEKISQQRRDLWEAENQYVVLKEAATKRQLSEQEKSLLAHEKETL EYKRQLAELGDKIEHQKRLNELAQQAARFEQQQSAKQAAISAKARGLTDRQAQRESEEQR LREVYGDNPAALAKATSALKNTWSAEEQLRGSWMAGMKSGWGEWAESATDSFSQVKNAAT QTFDGIAQNMAAMLTGSEQNWRGFTRSVLSMLTEIFLKQAMVGIVGSIGSAIGGAVGGGA SASGGTAIQAAAANFHFATGGFTGTGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMR GYAEGGYVGGAGSPAQMRRAEGIRFEQNNSVVIQNDGINGQAGPQLMKAVYEMARKGAQD EIQAQMRDGGVFSGGRR >gi|299857062|gb|ADWS01000002.1| GENE 59 60758 - 61171 168 137 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1378 NR:ns ## KEGG: ECS88_1378 # Name: not_defined # Def: minor tail protein T # Organism: E.coli_S88 # Pathway: not_defined # 1 137 1 137 137 246 100.0 2e-64 MGRPDWRAMLAGMTSTEYADWHRFYRTHYFQDTQLDMHFSGLTYAVLSLFFCDPDMHPSD FSLLVPRHEEEQVERPDEDKMLMQKAAGLAGGVRFGGDGGRDILSSADVADVMVDDAALM MASAGIPGGVRYVPAGW >gi|299857062|gb|ADWS01000002.1| GENE 60 61198 - 61629 462 143 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1862 NR:ns ## KEGG: ECIAI39_1862 # Name: not_defined # Def: minor tail protein G # Organism: E.coli_IAI39 # Pathway: not_defined # 1 143 1 143 143 254 100.0 6e-67 MFLKTEQFEYNGVSVTLSELSALQRIEHLALLKRRAEEAEASGNLQVSVEDLVRTGAFLV AMSLWHNHPQKTQSPSMNEAVMKIEQEVLTTWPADAIARAEDVVLCLSGMIEAVRPDTDI TEVAKNNTLTDDDFSAGKSSTAS >gi|299857062|gb|ADWS01000002.1| GENE 61 61648 - 62394 734 248 aa, chain - ## HITS:1 COG:ECs2169 KEGG:ns NR:ns ## COG: ECs2169 COG5492 # Protein_GI_number: 15831423 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Escherichia coli O157:H7 # 1 242 1 243 250 387 93.0 1e-107 MATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDGWQRLAKVKDLTPGEMTAEPYDDNYL DDEDADWTATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVF RGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVTAIKVTPTGTVEKGKTTTL TVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEI TVNNVPGG >gi|299857062|gb|ADWS01000002.1| GENE 62 62402 - 62797 477 131 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1352 NR:ns ## KEGG: ECUMN_1352 # Name: not_defined # Def: minor tail protein U # Organism: E.coli_UMN026 # Pathway: not_defined # 1 131 1 131 131 238 100.0 5e-62 MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLTDAEYTGEELDADTWRA TLHIEVFLPAQVPDSELDQWMESRIYPAMTAIPALAGLITTMVTQGYEYRRDDDMALWSS ADLTYSITYEM >gi|299857062|gb|ADWS01000002.1| GENE 63 62794 - 63369 279 191 aa, chain - ## HITS:1 COG:no KEGG:ECED1_2093 NR:ns ## KEGG: ECED1_2093 # Name: not_defined # Def: minor tail protein Z (GpZ) # Organism: E.coli_ED1a # Pathway: not_defined # 1 191 1 191 191 290 100.0 3e-77 MAIKGLDQAIDNLSRVRKNAIPAASAMTINRVATTAINQSSSQVARETKVRRKLVKERSR LKRATVRNPNAKIIVNRGDLPVIKLGIRMLGRRPDSILKAGQHRYQRAFIQRLNNGRWHV MQRLPQARYEEGNDDKGRKKRNRLPIQVVKIPMAAPLKQAFDENVDRIRRERLPKELAYA LKQQLRIAIKR >gi|299857062|gb|ADWS01000002.1| GENE 64 63385 - 63738 254 117 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1373 NR:ns ## KEGG: ECS88_1373 # Name: not_defined # Def: tail attachment protein (minor capsid protein FII) # Organism: E.coli_S88 # Pathway: not_defined # 1 117 13 129 129 218 96.0 6e-56 MRDFQNAFDAALAGVDSTIVEVMGIRAQFTSGAQRGGEVQGVFDDPESLGFAGGGVRIEG SSPSLFVRTDTVRAVRRGDTLTINGEMFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR >gi|299857062|gb|ADWS01000002.1| GENE 65 63731 - 64114 285 127 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1396 NR:ns ## KEGG: EC55989_1396 # Name: not_defined # Def: conserved hypothetical protein from phage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 127 17 143 143 229 99.0 2e-59 MATKEENLNRLRQLAGLLGREADMSGSAADIAQRVSEWEEELAVSPEGIMHSDESGADQN HTDDGEQLNNTDAPDDVKAVRVRKCLQVMGYCPETGRPVELALRGMRVLVPSSLATAMIQ HGTAEHA >gi|299857062|gb|ADWS01000002.1| GENE 66 64166 - 65194 1284 342 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1868 NR:ns ## KEGG: ECIAI39_1868 # Name: not_defined # Def: major head protein (head protein gp7) # Organism: E.coli_IAI39 # Pathway: not_defined # 1 342 1 342 342 694 100.0 0 MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPIVEG KVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLNDPAYRRLRIITDNLKQEE HAIVQVEEMQAVNAVLYGKYTMEGDQFDTVEVDFGRSEGNNIEQADGKKWSEQDRDTFDP THDIDLYCDQASGLVNIAIMDGTVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVS FKGYYGDLAIVVAKTSYVAEDGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDAQALSEGVV ASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPDEFVVVQVK >gi|299857062|gb|ADWS01000002.1| GENE 67 65252 - 65599 336 115 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1869 NR:ns ## KEGG: ECIAI39_1869 # Name: not_defined # Def: head decoration protein (gpD) (major capsid protein D) # Organism: E.coli_IAI39 # Pathway: not_defined # 1 115 1 115 115 197 100.0 1e-49 MVTKTITEQRAEVRIFAGNDPAHTATGSSGISSATPALTPLMLDGATGKLVVWDGQKAGS AVGILVLPLEGTEAVLTYYKSGTFATEAIRWPESVDEHKKANAFTGSALSHAALP >gi|299857062|gb|ADWS01000002.1| GENE 68 65636 - 67141 1143 501 aa, chain - ## HITS:1 COG:ECs1108 KEGG:ns NR:ns ## COG: ECs1108 COG0616 # Protein_GI_number: 15830362 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli O157:H7 # 1 501 1 501 501 786 96.0 0 MRRNLSHIIAAAFNEPLLLEPAYARVFFCALGREMGAASLSVPQQQVQLDAPGMLAETDE YMAGGKRPARVYRVVNGIAVLPVSGTLVHRLGGMRPFSGMTGYDGIVACLQQAMADSQVR GILLDIDSPGGQAAGAFDCADMIYRLRQQKPVWALCNDTACSAAMLLASACSRRLVTQTS RIGSIGVMMSHVSYAGHLAQAGVDITLIYAGAHKVDGNQFEALPAEVRQDMQQRIDAAHR MFAEKVAMYTGLSVDAVTGTEAAVFEGQSGIEAGLADELINASDAISVMATALNSNVRGG TMPQLTATEAAVQENQRVMGILTCQEAKGREQLATMLAGQQGMSVEQARAILAAAAPQQP VASAQSEADRIMACEEANGREQLAVTLAAMPEMTVEKARPILAASPQANAGPSLRDQIMA LDEAKGAEAQAEQLAACPGMTVESARAVLAAGSGKAEPVSASTTALFEHFMANHSPAAVQ GGVSQASEDGDADVKMLMAMP >gi|299857062|gb|ADWS01000002.1| GENE 69 67131 - 68723 1096 530 aa, chain - ## HITS:1 COG:ECs1107 KEGG:ns NR:ns ## COG: ECs1107 COG5511 # Protein_GI_number: 15830361 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Escherichia coli O157:H7 # 1 530 1 530 530 1011 98.0 0 MKRTPVLIDVNGVPLRESLSYNGGGAGFGGQMAEWLPPAQSADAALLPALRLGNARADDL VRNNGIAANAVALHKDHIVGHMFLISYRPNWRWLGMRETAAKSFVDEVEAAWSEYAEGMF GEIDVEGKRTFTEFIREGVGVHAFNGEIFVQPVWDTETTQLFRTRFKAVSPKRVDTPGHG MGNRFLRAGVEVDRYGRAVAYHICEDDFPFSGSGRWERIPRELPTGRPAMLHIFEPVEDG QTRGANQFYSVMERLKMLDSLQATQLQSAIVKAMYAATIESELDTEKAFEYIAGAPQGQK DNPLINILDKFSTWYDTNHVTLGGVKIPHLFPGDDLKLQTAQDSDNGFSALEQALLRYIA AGLGVSYEQLSRDYSKVSYSSARASANESWRYFMGRRKFIASRLATQMFSCWLEEALLRG IIRPPRARFDFYQARSAWSRAEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELALMGE DYQDIFRQQVRESAEREKAGLSRPVWIAQAYQQQIAESRRPEEETTPRET >gi|299857062|gb|ADWS01000002.1| GENE 70 68720 - 68926 201 68 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1367 NR:ns ## KEGG: ECS88_1367 # Name: not_defined # Def: head stabilization protein (head protein GP3) # Organism: E.coli_S88 # Pathway: not_defined # 1 68 1 68 68 94 100.0 1e-18 MVTVAELQALRQARLDLLTGKRVVSVQKDGRRIEYTAASLDELNRAINDAESVLGTTRRR RRPLGVRL >gi|299857062|gb|ADWS01000002.1| GENE 71 68910 - 70658 1410 582 aa, chain - ## HITS:1 COG:Z2131 KEGG:ns NR:ns ## COG: Z2131 COG5525 # Protein_GI_number: 15801568 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli O157:H7 EDL933 # 1 582 73 654 654 1184 96.0 0 MNSMGNDRIRTVNLIKSARVGYTKMLLGVEAYFIEHKSRNSLLFQPTDSAAEDFMKSHVE PTIRDVPVLLDLAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDEL SSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKIKGTCQIEKAANESAHFMRFYVPC PHCGEEQYLKFGDESTPFGLKWEKDSPESVFYLCEHHGCVIHQSELDQSNGRWICENTGM WTRDGLTFFSAADNEIPPPRSITFHIWTAYSPFTTWVQIVYDWLDALKDPNGLKTFVNTT LGETWEEAVGEKLDHQVLMDKVVHYTAAVPARVVYLTAGIDSQRNRFEMYVWGWAPGEEA FLVDKIIIMGRPDEEETLLRVDAAINKKYCHADGTEMTISRVCWDTGGIDGEIVYQRSKK HGVFRVLPVKGASVYGKPVITMPKTRNQRGVYLCEVGTDTAKEILYARMKADPTPADEAT SYAIRFPDDPEIFSQTEAQQLVAEELVEKWEKGKMRLLWDNKKRRNEALDCLVYAYAALR VSVQRWQLDLAVLAKSREEETTRPTLKELAAKLSGGVNGYSR >gi|299857062|gb|ADWS01000002.1| GENE 72 70810 - 71358 282 182 aa, chain - ## HITS:1 COG:STM2609 KEGG:ns NR:ns ## COG: STM2609 COG4220 # Protein_GI_number: 16765930 # Func_class: L Replication, recombination and repair # Function: Phage DNA packaging protein, Nu1 subunit of terminase # Organism: Salmonella typhimurium LT2 # 1 162 1 162 164 249 80.0 2e-66 MNVNKKKLADIFGVDVRTITAWQSQGLPLVSGGGKGTESVFDTTAAIQWYAQREADIENE KLRKEIEDLRAASESDLQPGTIDYERYRLTKAQADAQELKNAREEGLVLETELFTYIFQR VAQNISGILVRVPQTLQRKYPDISPVHLDAVKTEIAKASDVASEAGENVRRWIDDFRRTE GG >gi|299857062|gb|ADWS01000002.1| GENE 73 71673 - 71999 294 108 aa, chain + ## HITS:1 COG:ECs1919 KEGG:ns NR:ns ## COG: ECs1919 COG2963 # Protein_GI_number: 15831173 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 164 96.0 3e-41 MTKNTRFSPEVRQRAVRMVLESQSEYDSQWATICSIAPKIGCTPETLRVWVRQHERDTGG GDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK >gi|299857062|gb|ADWS01000002.1| GENE 74 72969 - 73436 383 155 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1058 NR:ns ## KEGG: EC55989_1058 # Name: rz # Def: endopeptidase (lysis protein) from bacteriophage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 155 29 183 183 277 94.0 7e-74 MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKNVRELKLANAAITDMQMRQRD VAALDAKYTKELADAKAENETLRADVAAGRKRLRINATCPGPVREATGTARVDNATGPQL ADTVTRDYFTLRERLMTMQKQLEGAQEYIRTQCLK >gi|299857062|gb|ADWS01000002.1| GENE 75 73438 - 73536 72 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAEKLSTWKFILIWLVFVIMASGYFIGQILWW >gi|299857062|gb|ADWS01000002.1| GENE 76 73735 - 74268 266 177 aa, chain - ## HITS:1 COG:Z1796 KEGG:ns NR:ns ## COG: Z1796 COG3772 # Protein_GI_number: 15801268 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Escherichia coli O157:H7 EDL933 # 1 177 1 177 177 346 96.0 1e-95 MNAKIRYGLSAAVLALIAAGAPAPDILDQFLDEKEGNHTTAYRDGAGIWTICRGAILVDG KPVVPGMKLSKEKCDRVNAIERDKALAWVEKNIRVPLSEPQKAGIASFCPYNIGPGKCFP STFYKRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR >gi|299857062|gb|ADWS01000002.1| GENE 77 74374 - 74646 175 90 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E0946 NR:ns ## KEGG: SbBS512_E0946 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 90 1 90 90 152 100.0 5e-36 MDNNTISLQELLDSISRLREDVNTLTVAFSYLAFSIPREQMQSTLASIQFESCNPKWSQE QQDSFRRLAVLLDEKYAGKITISADSSENP >gi|299857062|gb|ADWS01000002.1| GENE 78 74612 - 74956 341 114 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E0945 NR:ns ## KEGG: SbBS512_E0945 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 114 1 114 114 224 100.0 7e-58 MTQNYELIVKGIRNFENKVTVTLALRDKKRFDGEIFDLDISLDRVEGAALEFYEAAARRS IRQVFLDVAAGLCEGDEQSPEKRPVILEAQDVLITYRGKLPGIITGSLKSPPKW >gi|299857062|gb|ADWS01000002.1| GENE 79 74961 - 75176 298 71 aa, chain - ## HITS:1 COG:no KEGG:ECSP_2956 NR:ns ## KEGG: ECSP_2956 # Name: not_defined # Def: putative lysis protein S of prophage CP-933V # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 71 20 90 90 136 98.0 2e-31 MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTNLYFKI REDRRKAARGE >gi|299857062|gb|ADWS01000002.1| GENE 80 75327 - 77051 847 574 aa, chain - ## HITS:1 COG:ECs2262 KEGG:ns NR:ns ## COG: ECs2262 COG2801 # Protein_GI_number: 15831516 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 573 44 616 616 1003 85.0 0 MQAIAAEGDVVVSGATEPEWYYVIVLAGQSNAMAYGEGLPLPDSYDAPHPRIKQLARRNT VTPGGEVCVFNDIIPADHCLHDVQDMSTINHPRADLSKGQYGCVGQGLHIAKKLLPYIPN NAGILLVPCCRGGSAFTQGTEGTFSESTGASQDSARWGVGKPLYQDLLFRTKAALQKNPK NVLLAICWMQGEFDMTNASYAQQPAAFLAMVQQFRADLAGLAAQCHGGSPASVPWICGDT TYAWKQEHGTQYEVVYGAYKGKESQQIYFVPFMTDGSGVNTPTNNPSEDPDIAGSGYYGS ASRTNKNWVSSNRPTHFSSWARRGIIPDRMATAILNVAGRTLAFISGKAPEIKASPGGDT PSGPSEDASIRTISLLPTAGDAAAQGWSIKNGGIQLSDGVFKITKQSNKAWSLTRPVDDA VSLLTRGGRLSCKFRLSGALTNNQFGLGIYLYTDVALPDVVAMTGTGNPFLMSFFTQTTD GKLNLMHHKKAGNTKLGEFGNYSNDWQTLELVFTAGSATVTPKLNGVAGPAFQVIKDSLT LGLNALTLTDITKNAAYGVEIESLVLEINAPASS >gi|299857062|gb|ADWS01000002.1| GENE 81 78453 - 79502 689 349 aa, chain - ## HITS:1 COG:ECs1780 KEGG:ns NR:ns ## COG: ECs1780 COG0863 # Protein_GI_number: 15831034 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Escherichia coli O157:H7 # 1 349 1 349 352 697 93.0 0 MLNTVKISSCELINADCLEFIRSLPENSVDLIVTDPPYFKVKPEGWDNQWKGDDDYLKWL DQCLAQFWRVLKPVGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESL RAYFPATERILFAEHYQGPYRPKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQI ADATGKKNMVSHWFSASQWQLPNESDYLKLQSLFARVAEEKHQRGELEKPHHQLVDTYTS LNRQYVELQSEYKHLRRYFGVTAQVPYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISASS RPGDLVADFFMGSGSTVKAALALGRRAIGVELETGRFEQTVREVQDLIV >gi|299857062|gb|ADWS01000002.1| GENE 82 79653 - 79850 145 65 aa, chain - ## HITS:1 COG:no KEGG:ECSP_1670 NR:ns ## KEGG: ECSP_1670 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 65 42 106 106 120 98.0 1e-26 MLKQQDMTETARVVFNELSVTEPATVGEIAQNTYLSRERCQLILTQLVMAGLADYQFGCY RRLQS >gi|299857062|gb|ADWS01000002.1| GENE 83 80065 - 80754 237 229 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1328 NR:ns ## KEGG: ECUMN_1328 # Name: Q # Def: antitermination protein Q # Organism: E.coli_UMN026 # Pathway: not_defined # 1 229 3 231 231 381 90.0 1e-104 MNNQYLQFVREQLMIATADLSGSTKGQLEAWQENAMFDTGRYRRKKIRYRDEVTGKMITR DNPPIPGKQSLAKGVSIPLVSPVEFSTSSWRRAVLSLEEHHKAWLLWCYSGSICWEYQIA ITQWVWNEFKTRYGTRKIAGKTQERVKKLIWLAAQDVRGWITGCEVYQRQELARLCGVKP DNWSHNYANYWREMCDIFKSLDRESVICTVKIRAQQKATFSRRDIAKVN >gi|299857062|gb|ADWS01000002.1| GENE 84 80751 - 81116 236 121 aa, chain - ## HITS:1 COG:ECs2268 KEGG:ns NR:ns ## COG: ECs2268 COG4570 # Protein_GI_number: 15831522 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 4 121 2 119 119 208 94.0 2e-54 MTERIEFVLPYPPTVNTYWRRRGSTYFVSKVGERYRRDVALIVRQQQLKLNLSGRPAIEI IAEPPDKRRRDLDNILKAPLDVLTHAGLLIDDEQFDEINIVRGQLVPGGRLGIKITELEY A >gi|299857062|gb|ADWS01000002.1| GENE 85 81117 - 82100 561 327 aa, chain - ## HITS:1 COG:no KEGG:ECO26_1478 NR:ns ## KEGG: ECO26_1478 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 327 25 351 351 660 99.0 0 MPVFHNTRVLVEPEPKSMRNLSSGVVPAVRQPLAEDKSLLPFFSDERVIRAAGGAGALSD WLLRHVKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLGQLAHQNLSAW MIDVIRHAMNGSQERELSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDI VPGEQTATSILKQRTKNLAPLPHAHQQNPPQEKTVVSIAVDPESPAQYLQRQKSQREEMP VYTRWVKTQKCMTCGNQADDPHHIIGHGLGGMGTKADDLFVIPLCRKCHSELHAGVKDFE EKHGSQLLLLIRFLMHARNSGVLKWKA >gi|299857062|gb|ADWS01000002.1| GENE 86 82519 - 82770 212 83 aa, chain - ## HITS:1 COG:no KEGG:SDY_1433 NR:ns ## KEGG: SDY_1433 # Name: rem # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 83 1 83 83 159 100.0 2e-38 MMNIEELRKIFCEDGLYAVCVENGNIVSHYRIVCLQKNGAALINFVDARVTDGFILRDGE FVTSLQALKEIGIKAGFSAFSEE >gi|299857062|gb|ADWS01000002.1| GENE 87 82987 - 83199 199 70 aa, chain - ## HITS:1 COG:no KEGG:ECO103_1375 NR:ns ## KEGG: ECO103_1375 # Name: not_defined # Def: regulatory protein for HokC # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 70 1 70 70 109 100.0 4e-23 MLYTRRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEV AVFTAYEPEE >gi|299857062|gb|ADWS01000002.1| GENE 88 83885 - 84580 150 231 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1371 NR:ns ## KEGG: EC55989_1371 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 231 5 235 235 416 100.0 1e-115 MLEPPKSYNEMLPMLHKATFITTFIFYLSLVIYGYMPLVGINAKYIPPVKDYEEFIKWIL TFGILPIASSVFWSVISGALDLHNNVAKIIGIRKMWDSHLIIKPLAKIAGVTRKLTTDES HKVMSKLYYPEVKELKDKHYVELFWNKVYYFWVFFEHTVIAFVTILIISIAKLTNIFSVT GSLINLWLWIISLVAFDFLIFIASVKPRTESQVRQIPDSKIKEFFNNNNIF >gi|299857062|gb|ADWS01000002.1| GENE 89 84653 - 85246 152 197 aa, chain + ## HITS:1 COG:ymfD KEGG:ns NR:ns ## COG: ymfD COG0500 # Protein_GI_number: 16129100 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 192 25 216 221 262 67.0 3e-70 MPSNYLCKQIESTNKNGNALDFGCGKLRYSEQLVNKFETVTFLDSRRQLERVQIIRGVQT TIPDYVINNYKNANIVSYENIDKITNHYDFILCANVLSAIPCESTIHKVLSAIRELLKSD GEALIVNQYKSSYFKRYESGIKHLHGYIYQNSRNAFYYGLLDVDTVSKICSDNNLEIIKS WSKAGSSYVVVGKHIHI >gi|299857062|gb|ADWS01000002.1| GENE 90 85561 - 86460 410 299 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1369 NR:ns ## KEGG: EC55989_1369 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 299 1 299 299 545 99.0 1e-154 MIDPLIRNLQSDIALLQLYIAQRKQAGFHDMERIIESLTIFMFRALKMGELVNMNQIKVN FPAIDLADNKNMIAVQVTTNASPAKIKKTIESFEEANEIGESLKDKYSTLYIFGFCKASR YLTPSYCKIIDPSYFVNELCDKADEDMVQDMIDAIRRHHDYTSLHPWSDKDSLEIILNII NRNAIKHRMSCEGSLSDMLTGLKEINEVITKGTIQRKQRSKSISDFKDQSMVKFMRGVMD DLSVIQAIVNKSKVNQGDMVYISHEDMINIDKLKAKIASDSSEIARLNNIDITLNVVDL >gi|299857062|gb|ADWS01000002.1| GENE 91 86713 - 87135 91 140 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1368 NR:ns ## KEGG: EC55989_1368 # Name: not_defined # Def: conserved hypothetical protein from phage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 140 1 140 140 249 100.0 2e-65 MAKVFTQEEREKIKGQVVELVRQSGRETLRQLEVKTGATRYLMSVLARELVASGDVYNSG YGLFPSEQARKDWQNARKKLSRAKLKEPSAVDPDLIWSLPDGEIRRYDRRQNIICRECRK SEVMQRILAFYQGNARYLLK >gi|299857062|gb|ADWS01000002.1| GENE 92 87176 - 88141 414 321 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1852 NR:ns ## KEGG: ECUMN_1852 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 321 19 339 339 623 99.0 1e-177 MSLLFAERPLVINTQLAMKIGLNEAIVLQQLHYWLRDTNSGMECDGVRWIYNTTEQWLEQ FPFWSESTLKRAFASLKTLGLLRCEKLNKSKRDMTNFYTINYGSELLDDGKLSESIGSKC AAPSGQNDTMEEVKMKRSIGSKRPNVIGSKWPDDPTENTTEITTENKNTFRPEASQPDPQ TAEQDFLIWHPGAVVFSAKKRQWGSQEDLACAQWIWGRIVGLYEQAASDDGEIMRPKEPN WTVWANDVRTMRMLDGRSHRQICEMFGRVQRDPFWVKNIMSPSKLREKWDELVIRLGRSP VQRCVNHISEPDTEIPPGFRG >gi|299857062|gb|ADWS01000002.1| GENE 93 88122 - 88643 152 173 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1853 NR:ns ## KEGG: ECUMN_1853 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 173 1 173 173 337 100.0 1e-91 MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNIDVQRVTDEGGAVDQRAL GVNRVKIFERWKAIDTRDKREKFTALVPAIMEAIRINDFRLYREISDGKSITYMIAGLNK EYGDVVESGLLFADPAVVDRETDELIEKAIAFKLAYRQQYQQKAGWNYEPSFC >gi|299857062|gb|ADWS01000002.1| GENE 94 88627 - 88854 95 75 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1365 NR:ns ## KEGG: EC55989_1365 # Name: not_defined # Def: DNA-binding transcriptional regulator DicC # Organism: E.coli_55989 # Pathway: not_defined # 1 75 10 84 84 143 100.0 1e-33 MFKSDVINFYGTKAKVAKAAGVDPSAVSQWQELVPEGRAMRLQEASGGELLYDPKVYDEY RKTKRAGRLNNENHS >gi|299857062|gb|ADWS01000002.1| GENE 95 88932 - 89339 202 135 aa, chain + ## HITS:1 COG:ECs1765 KEGG:ns NR:ns ## COG: ECs1765 COG1396 # Protein_GI_number: 15831019 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 135 1 135 135 133 53.0 9e-32 MNEKTLGQRIRERRKQVGLSQNGLSKAAGVSGSSISLWESDHTAPRGQNLHRLAEVLQCS PTWILFGDEDKTPAPPVSLDSTLDLSEDELEMLRLYRALPKSEQQAQLSELRARVENFNR LFTELLEARKRNKHQ >gi|299857062|gb|ADWS01000002.1| GENE 96 89532 - 89687 184 51 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1856 NR:ns ## KEGG: ECUMN_1856 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 51 53 103 103 97 100.0 1e-19 MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTENGARRWLERNSGE >gi|299857062|gb|ADWS01000002.1| GENE 97 89647 - 89817 183 56 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1857 NR:ns ## KEGG: ECUMN_1857 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 55 1 55 205 99 89.0 3e-20 MVPVAGWKETQVSDMDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG >gi|299857062|gb|ADWS01000002.1| GENE 98 89847 - 90065 237 72 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_1156 NR:ns ## KEGG: EcSMS35_1156 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 72 1 72 72 113 100.0 2e-24 MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAA ALSIARMITYPR >gi|299857062|gb|ADWS01000002.1| GENE 99 90069 - 90233 99 54 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_1623 NR:ns ## KEGG: ECIAI1_1623 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 54 18 71 71 91 100.0 8e-18 MNQLPRRALSRYGLTFQGNILSVNCQFRMRTRVRRTHSTSPVENSLITNLSFVD >gi|299857062|gb|ADWS01000002.1| GENE 100 90633 - 90821 182 62 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1859 NR:ns ## KEGG: ECUMN_1859 # Name: not_defined # Def: putative regulator of cell division encoded by prophage # Organism: E.coli_UMN026 # Pathway: not_defined # 1 62 36 97 97 123 100.0 2e-27 MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGC AQ >gi|299857062|gb|ADWS01000002.1| GENE 101 90818 - 91009 162 63 aa, chain + ## HITS:1 COG:no KEGG:JW1567 NR:ns ## KEGG: JW1567 # Name: ydfD # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 63 1 63 63 119 100.0 2e-26 MNSAFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIHQDNIEIP AGL >gi|299857062|gb|ADWS01000002.1| GENE 102 91102 - 93573 1347 823 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1626 NR:ns ## KEGG: ECIAI1_1626 # Name: not_defined # Def: putative exonuclease from phage origin # Organism: E.coli_IAI1 # Pathway: not_defined # 1 823 13 835 835 1605 99.0 0 MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIV CEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVK FDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCI PGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARANQQYTENSTGKISPVIAAIH REYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWAKKEVIDNDREDWKRISASMRKQPD ALRYDRQTIFGLVRERPIDIHKDPVALNKYICEYLTTKGVFENEETDLGTVDVLQSSETQ TDAVETEVSDIPKNETAPEAEPSVEREGPFYFLFADKDGEKYGRANKLSGLDKALAAGAT EITKEEYFARKNGTYTGLPQNVDTAEDSEQPEPIKVTADEVNKIMQAANISQPDADKLLA ASRGEFVEGISDPNDPKWVKGLQTRDSVNQNQHESERNYQKAEQNSPNALQNEPETKQPE PVAQQEVEKVCTACGQTGGGNCPDCGAVMGDATYQETFDEEYQVEVQEDDPEEMEGAEHP HKENTGGNQHHNSDNETGETADHPIKVNGHHGITSTSRTCDHLMIDLETMGKNPDAPIIS IGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDAL LQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKA IDFDARTAIPFEGERHNALDDARYQAKYVSVIWQKLIPSQADS >gi|299857062|gb|ADWS01000002.1| GENE 103 93570 - 93662 90 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MITSLIDFFISYIRRAPVAEYQSQPATVEH >gi|299857062|gb|ADWS01000002.1| GENE 104 93646 - 93897 204 83 aa, chain + ## HITS:1 COG:no KEGG:ECED1_1745 NR:ns ## KEGG: ECED1_1745 # Name: not_defined # Def: putative excisionase # Organism: E.coli_ED1a # Pathway: not_defined # 1 82 25 106 107 161 100.0 6e-39 MSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCF YNLEEIDRWIERQASARPRRHLT >gi|299857062|gb|ADWS01000002.1| GENE 105 93932 - 95212 301 426 aa, chain + ## HITS:1 COG:intQ KEGG:ns NR:ns ## COG: intQ COG0582 # Protein_GI_number: 16129537 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 31 426 2 398 398 788 96.0 0 MKYPTGVENHGGKLRIWFVYKGVRVRENLGVPDTAKNRRVAGELRASVCYAIKTGVFDYA KQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNL ASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLA DNPFKGISPLKESRSIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWE DIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV HLREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPH NEAMKN >gi|299857062|gb|ADWS01000002.1| GENE 106 95214 - 95342 65 42 aa, chain - ## HITS:1 COG:STM1507 KEGG:ns NR:ns ## COG: STM1507 COG0477 # Protein_GI_number: 16764852 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 35 1 35 325 61 77.0 4e-10 MTIEKHERSTKDLVKAAVSGWLGTALEFMDFKSHTCQLFDKY >gi|299857062|gb|ADWS01000002.1| GENE 107 95400 - 96419 937 339 aa, chain - ## HITS:1 COG:rspB KEGG:ns NR:ns ## COG: rspB COG1063 # Protein_GI_number: 16129538 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 339 1 339 339 680 99.0 0 MKSILIEKPNQLSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHE FFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEY AVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVL KGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGEIFTEKGIKPTLIIDAACHPS ILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDWLSKGL IKPEKLITHTFDFQHVADAISLFEQDQKHCCKVLLTFSE >gi|299857062|gb|ADWS01000002.1| GENE 108 96431 - 97645 1300 404 aa, chain - ## HITS:1 COG:rspA KEGG:ns NR:ns ## COG: rspA COG4948 # Protein_GI_number: 16129539 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 404 1 404 404 866 99.0 0 MKIVKAEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVASYLQDHLCPQLIGRDA HRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLGGASREGVMVY CHTTGHSIDEALDDYARHQELGFKAIRVQCGIPGMKTTYGMSKGKGLAYEPATKGQWPEE QLWSTEKYLDFMPKLLDAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRMFWMEDP TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTLTHAGGITGMRRI ADFASLYQVRTGSHGPSDLSPVCMAAALHFDLWVPNFGVQEYMGYSEQMLEVFPHNWTFD NGYMHPGDKPGLGIEFDEKLAAKYPYEPAYLPVARLEDGTLWNW >gi|299857062|gb|ADWS01000002.1| GENE 109 97851 - 98177 261 108 aa, chain - ## HITS:1 COG:ynfA KEGG:ns NR:ns ## COG: ynfA COG1742 # Protein_GI_number: 16129540 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 108 1 108 108 164 100.0 3e-41 MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVY AAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIVAGWGRT >gi|299857062|gb|ADWS01000002.1| GENE 110 98312 - 98653 342 113 aa, chain + ## HITS:1 COG:no KEGG:B21_01542 NR:ns ## KEGG: B21_01542 # Name: ynfB # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 113 1 113 113 204 100.0 8e-52 MKITLSKRIGLLAILLPCALALSTTVHAETNKLVIESGDSAQSRQHAAMEKEQWNDTRNL RQKVNKRTEKEWDKADAAFDNRDKCEQSANINAYWEPNTLRCLDRRTGRVITP >gi|299857062|gb|ADWS01000002.1| GENE 111 98688 - 99248 484 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116490772|ref|YP_810316.1| acetyltransferase [Oenococcus oeni PSU-1] # 7 168 3 164 167 191 54 4e-47 MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRF VVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKL YLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIFQHQYLAEHKTPGQTL LKPTAQ >gi|299857062|gb|ADWS01000002.1| GENE 112 99251 - 99997 533 248 aa, chain - ## HITS:1 COG:no KEGG:ECBD_2061 NR:ns ## KEGG: ECBD_2061 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 248 1 248 248 488 100.0 1e-137 MIENHLYSLVTVVKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSNEFDFDPLRGPVKD FTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVALVLDANYYRDAETLEKRVR LQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKSNDKTLSVS ATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEGVKPAVERVYT IKNTIDYY >gi|299857062|gb|ADWS01000002.1| GENE 113 100069 - 100374 203 101 aa, chain + ## HITS:1 COG:no KEGG:ECSE_1707 NR:ns ## KEGG: ECSE_1707 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 101 2 102 102 155 99.0 3e-37 MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQP DSQVVGHCANDTHKILYTRTTSGNVSAPAQSTQDGAPAEPQ >gi|299857062|gb|ADWS01000002.1| GENE 114 100573 - 102999 2120 808 aa, chain + ## HITS:1 COG:ynfE KEGG:ns NR:ns ## COG: ynfE COG0243 # Protein_GI_number: 16129545 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 808 1 808 808 1671 99.0 0 MSKNERMVGISRRTLVKSTAIGSLALAAGGFSLPFTLRSAAAAVQQAREKVVWGACSVNC GSRCALRLHVKDNEVTWVETDNTGSDEYGNHQVRACLRGRSIRRRINHPDRLNYPMKRVG KRGEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKR LMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTTDIENSKLVVMFGNNPAETRMSGG GITYLLEKAREKSNAKMIVIDPRYTDTAAGREDEWLPIRPGTDAALVAGIAWVLINENLV DQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGEGDDNTAKTPQWASQITGIPVDRIIKL AREIGTAKPAYICQGWGPQRQANGELTARAIAMLPILTGNVGISGGNSGARESTYTITIE RLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQH SDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYL IFLQPVTSEKFERKPIYWILSEVAKRLGPDVYQKFTEGRTQEQWLQHLYAKMLAKDPALP SYDELKKMGIYKRKDPNGHFVAYKAFRDDPEANPLKTPSGKIEIYSSKLAEIARTWELEK DEVISPLPVYASTFEGWDSPERRTFPLQLFGFHYKSRTHSTYGNIDVLKAACRQEVWINP IDAQKRGIANGDMVRVFNHRGEVRLPAKVTPRILPGVSAMGQGAWHEANMSGDKIDHGGC VNTLTTLRPSPLAKGNPQHTNLVEIEKI >gi|299857062|gb|ADWS01000002.1| GENE 115 103060 - 105483 1678 807 aa, chain + ## HITS:1 COG:ynfF KEGG:ns NR:ns ## COG: ynfF COG0243 # Protein_GI_number: 16129546 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 807 2 808 808 1701 99.0 0 MKIHTTEALMKAEISRRSLMKTSALGSLALASSAFTLPFSQMVRAAEAPVEEKAVWSSCT VNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRGRSIRRRMNHPDRLKYPMK RVGKRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHVLYGTGVDGGNITNSNVPYRL MNSCGGFLSRYGSYSTAQISAAMSYMFGANDGNSPDDIANTKLVVMFGNNPAETRMSGGG VTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALACAIAWVLITENMVD QPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEGPDGIAKTPEWAAKITSIPAEKIIQLA REIGSAKPAYICQGWGPQRHSNGEQTSRAIAMLSVLTGNVGINGGNSGVREGSWDLGVEW FPMLENPVKTQISVFTWTDAIDHGTEMTATRDGVRGKEKLDVPIKFLWCYASNTLINQHG DINHTHEVLQDDSKCEMIVGIDHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVI LAQPATSAKFERKPIYWMLSEVAKRLGPDVYQTFTEGRSQHEWVKYLHAKTKERNPEMPD YEEMKTTGIFKKKCPEEHYVAFRAFREDPQANPLKTPSGKIEIYSERLAKIADTWELKKD EIIHPLPAYTPGFDGWDDPLRKTYPLQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPI DAQARGIRHGDTVRVFNNNGEMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSI NILTSHRPSPLAKGNPSHSNLVQIEKV >gi|299857062|gb|ADWS01000002.1| GENE 116 105494 - 106111 420 205 aa, chain + ## HITS:1 COG:ECs2295 KEGG:ns NR:ns ## COG: ECs2295 COG0437 # Protein_GI_number: 15831549 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 415 99.0 1e-116 MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFA YYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEK GHMTKCDGCYLRVAEGKQPICVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPN IVIKPNANSRPTGDTTGYLANPEEV >gi|299857062|gb|ADWS01000002.1| GENE 117 106113 - 106967 743 284 aa, chain + ## HITS:1 COG:ynfH KEGG:ns NR:ns ## COG: ynfH COG3302 # Protein_GI_number: 16129548 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Escherichia coli K12 # 1 284 1 284 284 449 98.0 1e-126 MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNDADRQRIVRGMFFLWLLMGIGFIA SVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWLVAVIGKMPQALGKLWLLV SMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLSGPILAAAILRAARVTFNTTP FAIISVLALIACAGVIVLQGLSLASIHSSVQQASALVPDYASLQVWRVVLLCAGLGCWVC PLIRRREPHVAGLILGLILILGCEMIGRVLFYGLHMTVGMAIAG >gi|299857062|gb|ADWS01000002.1| GENE 118 107010 - 107624 546 204 aa, chain + ## HITS:1 COG:ECs2297 KEGG:ns NR:ns ## COG: ECs2297 COG3381 # Protein_GI_number: 15831551 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli O157:H7 # 1 204 4 207 207 369 99.0 1e-102 MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAF QTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMK QNEPEDHFGSLLLMAAWLAENGRQTECGELLAWHLFPWSTRFLDVFIEKAEHPFYRALGE LARLTLAQWQSQLLIPVAVKPLFR >gi|299857062|gb|ADWS01000002.1| GENE 119 107819 - 109075 1111 418 aa, chain + ## HITS:1 COG:ynfJ KEGG:ns NR:ns ## COG: ynfJ COG0038 # Protein_GI_number: 16129550 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Escherichia coli K12 # 1 418 21 438 438 681 99.0 0 MFRRLLIATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALG GLAAGLLLMGWQKFTQQRPHAPTDYMEALQTDGQFDYAASLVKSLASLLVVTSGSAIGRE GAMILLAALAASCFAQRFTPRQEWKLWIACGAAAGMAAAYRAPLAGILFIAEVLFGTMML ASLGPVIISAVVALLVSNLINHSDALLYNVQLSVTVQARDYALIISTGVLAGLCGPLLLT LMNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAG IFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTGMA TLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS >gi|299857062|gb|ADWS01000002.1| GENE 120 109028 - 109723 744 231 aa, chain - ## HITS:1 COG:ECs2299 KEGG:ns NR:ns ## COG: ECs2299 COG0132 # Protein_GI_number: 15831553 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Escherichia coli O157:H7 # 1 231 5 235 235 444 100.0 1e-125 MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGSKETPEGLRNKDALVLQ SVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANLTEKVDHVVVEGTGGWRSL MNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIANDGLPLIGWVANRINPGLAH YAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLAMLRSVLAVDRVTV >gi|299857062|gb|ADWS01000002.1| GENE 121 109848 - 111068 274 406 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 146 394 63 317 323 110 28 9e-23 MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLV QELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKD DSPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGE ALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSS SLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSL CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIR QQALPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG >gi|299857062|gb|ADWS01000002.1| GENE 122 111203 - 112096 204 297 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 3 245 1 239 305 83 26 1e-14 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLT AAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDY PDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEHAVIVHEPLMAMIPHDHPLAN NPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGL GVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNFRIHLLNALR >gi|299857062|gb|ADWS01000002.1| GENE 123 112203 - 113456 1006 417 aa, chain + ## HITS:1 COG:ynfM KEGG:ns NR:ns ## COG: ynfM COG0477 # Protein_GI_number: 16129554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 417 1 417 417 728 99.0 0 MSRTTTVDGAPASDTDKQSISQPNQFIKRGTPQFMRVTLALFSAGLATFALLYCVQPILP VLSQEFGLTPANSSISLSISTAMLAIGLLFTGPLSDAIGRKPVMATALLLASICTLLSTM MTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLIS GVFTDFFNWRIALAAIGCFALASALMFWKILPESRHFRPTSLRPKTLFINFRLHWRDRGL PLLFAEGFLLMGSFVTLFNYIGYRLMLSPWHVSQAVVGLLSLAYLTGTWSSPKAGTMTTR YGRGPVMLFSTGVMLFGLLMTLFSSLWLIFAGMLLFSAGFFAAHSVASSWIGPRAKRAKG QASSLYLFSYYLGSSIAGTLGGVFWHNYGWNGVGAFIALMLVIALLVGTRLHRRLHA >gi|299857062|gb|ADWS01000002.1| GENE 124 113880 - 114188 286 102 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKVLGLVVAAAMGLSSAAFAAETATTPAPTATTTKAAPAKTTHHKKQHKAAPAQKAQAA KKHHKNTKAEQKAPEQKAQAAKKHAGKHSHQQPAKPAAQPAA >gi|299857062|gb|ADWS01000002.1| GENE 125 114464 - 115285 487 273 aa, chain + ## HITS:1 COG:Z2592 KEGG:ns NR:ns ## COG: Z2592 COG3591 # Protein_GI_number: 15802012 # Func_class: E Amino acid transport and metabolism # Function: V8-like Glu-specific endopeptidase # Organism: Escherichia coli O157:H7 EDL933 # 1 273 1 273 273 516 99.0 1e-146 MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDRVPVNDTTQSPWDAVGQ LETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYDIHDIEGRV DPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITPLPLFEGDKAALTAALKSAGR KVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGV QSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK >gi|299857062|gb|ADWS01000002.1| GENE 126 115324 - 115653 459 109 aa, chain - ## HITS:1 COG:ECs2305 KEGG:ns NR:ns ## COG: ECs2305 COG2076 # Protein_GI_number: 15831559 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 144 100.0 5e-35 MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAAVLAAFSALSQAVKGID LSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMIMVKLA >gi|299857062|gb|ADWS01000002.1| GENE 127 115640 - 116005 430 121 aa, chain - ## HITS:1 COG:ECs2306 KEGG:ns NR:ns ## COG: ECs2306 COG2076 # Protein_GI_number: 15831560 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 121 1 121 121 182 100.0 2e-46 MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLSYIFLSFAVKKIALGVA YALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKARKPELEVNHGA V >gi|299857062|gb|ADWS01000002.1| GENE 128 116417 - 117451 1025 344 aa, chain + ## HITS:1 COG:ydgG KEGG:ns NR:ns ## COG: ydgG COG0628 # Protein_GI_number: 16129559 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli K12 # 1 344 1 344 344 491 99.0 1e-138 MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVP RVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVS VDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKIQQMMARPV EGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLAFALNYIPNIG SVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLSLI FWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSIAVLLSDLNKE >gi|299857062|gb|ADWS01000002.1| GENE 129 117476 - 118864 1405 462 aa, chain - ## HITS:1 COG:ECs2308 KEGG:ns NR:ns ## COG: ECs2308 COG1282 # Protein_GI_number: 15831562 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Escherichia coli O157:H7 # 1 462 1 462 462 850 100.0 0 MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIFGPDTGNVGWI LLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVGFNSYLHHDAGMAPILVNI HLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNRHKMNLAALVVSFLLLIVFVR TDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDL LIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGDDQEVGEHREITAEETA ELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLA EAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWKAQNV IVFKRSMNTGYAGVQNPLFFKENTHMLFGDAKASVDAILKAL >gi|299857062|gb|ADWS01000002.1| GENE 130 118875 - 120407 1575 510 aa, chain - ## HITS:1 COG:ECs2309 KEGG:ns NR:ns ## COG: ECs2309 COG3288 # Protein_GI_number: 15831563 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Escherichia coli O157:H7 # 1 510 1 510 510 974 99.0 0 MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEG NSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAMDSVPR ISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAA IGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME LFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEI FTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEKDGNITVDFDDVVIRGVTV IRAGEITWPAPPIQVSAQPQAAQKAAPEVKTEEKCACSPWRKYALMALAIILFGWLASVA PKEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGQGGWVSF LSFIAVLIASINIFGGFTVTQRMLKMFRKN >gi|299857062|gb|ADWS01000002.1| GENE 131 120931 - 121875 1018 314 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1769 NR:ns ## KEGG: EC55989_1769 # Name: ydgH # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 314 1 314 314 520 100.0 1e-146 MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTGRFNAIGEAVKAVSRRA DKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNRVINGVVELPKDQAVLIEP FDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYKKDAKKR IVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTASPSSEVGRFFETQSSKGGRYTV TLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTEVSYQVAKRAAKKGAKYYHITRQWQ ERGNNLTVSADLYK >gi|299857062|gb|ADWS01000002.1| GENE 132 122061 - 123443 1357 460 aa, chain + ## HITS:1 COG:ydgI KEGG:ns NR:ns ## COG: ydgI COG0531 # Protein_GI_number: 16129563 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 460 1 460 460 781 100.0 0 MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLIL TRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELR LFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVATLAKLLPLGLFVVLAMMMFKL DTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLS ALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSW TIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLT IASEMILVPYFLVGAFLLKIATRPLHKAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGL LVFLYARKTHTHDNVLNRQEMVLIGMLLIASVPATWMLVG >gi|299857062|gb|ADWS01000002.1| GENE 133 123480 - 124202 647 240 aa, chain + ## HITS:1 COG:ECs2312 KEGG:ns NR:ns ## COG: ECs2312 COG1028 # Protein_GI_number: 15831566 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 486 98.0 1e-137 MGKAQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLIKAGAQCIQADFS TNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGTPLADVLACMMQIHVNTPYLLNHAL ERLLRGHGHAASDIIHFTDYVVERGSDKHVAYAASKAALDNMTRSFARKLAPEVKVNSIA PSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSFPLDGGRHLR >gi|299857062|gb|ADWS01000002.1| GENE 134 124199 - 124534 322 111 aa, chain - ## HITS:1 COG:ECs2313 KEGG:ns NR:ns ## COG: ECs2313 COG3136 # Protein_GI_number: 15831567 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein required for alginate biosynthesis # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 165 100.0 2e-41 MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATII FSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIICWIKLH >gi|299857062|gb|ADWS01000002.1| GENE 135 124663 - 125382 593 239 aa, chain + ## HITS:1 COG:rstA KEGG:ns NR:ns ## COG: rstA COG0745 # Protein_GI_number: 16129566 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 239 4 242 242 445 99.0 1e-125 MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRESPDLVLLDIMLPGKDG MTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNE QATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEISLSTADFELLWELATHAGQI MDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAWE >gi|299857062|gb|ADWS01000002.1| GENE 136 125386 - 126687 1150 433 aa, chain + ## HITS:1 COG:rstB KEGG:ns NR:ns ## COG: rstB COG0642 # Protein_GI_number: 16129567 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 433 1 433 433 870 99.0 0 MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMNSSLYLMRSELREIPPH DWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVALDDQYTFLQRIPRSHYVL AVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPHWQDMLKLEAAAQRFGYGHLN ERIHFDEGSSFERLGIAFNQMADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSDNL SAAESQALNRDISQLEALIEELLTYARLDRPQNELHLSEPDLPLWLSTHLADIQAVTPDK TVRIKTLVQGHYAALDMRLMERVLDNLLNNALRYCHSTVETSLLLSGNRATLIVEDDGPG IAPENREHIFEPFVRLDPSRDRSTGGCGLGLAIVHSIALAMGGTVNCDTSELGGARFSFS WPLWHNIPQFTSA >gi|299857062|gb|ADWS01000002.1| GENE 137 126763 - 127692 667 309 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_1588 NR:ns ## KEGG: EcSMS35_1588 # Name: tus # Def: DNA replication terminus site-binding protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 309 5 313 313 582 99.0 1e-165 MARYDLVDRLNTTFRQMEQELAAFAAHLEQHKLLVARVFSLPEVKKEDEHNPLNRIEVKQ HLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQVDNLSQAALVSHIQHINKL KTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRTLTVLHDPATLRFGWANKHIIKN LHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQDIAALPQNAKLKIKRPVKVQPIA RVWYKGDQKQVQHACPTPLIALINRDNGARVPDVGELLNYDADNVQHRYKPQAQPLRLII PRLHLYVAD >gi|299857062|gb|ADWS01000002.1| GENE 138 127689 - 129092 1472 467 aa, chain - ## HITS:1 COG:ECs2317 KEGG:ns NR:ns ## COG: ECs2317 COG0114 # Protein_GI_number: 15831571 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Escherichia coli O157:H7 # 1 467 1 467 467 900 99.0 0 MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAASKVNE DLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGG VRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLSEKSRAFAD IVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHP EYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLAS GPRCGIGEISIPENEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNV FRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDK AAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQMVGSMKAGR >gi|299857062|gb|ADWS01000002.1| GENE 139 129235 - 130881 489 548 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 76 531 38 482 508 192 33 1e-47 MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAPEALTLLARQAFHDASF MLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVLPTCQDTGTAIIVGKKGQR VWTGGCDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNTGTNLPAQIDLYAVDGDEYKF LCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRTLGTAACPPYHIAFVIGGTSAET NLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKELLIEAQNLGLGAQFGGKYFAHDIRV IRLPRHGASCPVGMGVSCSADRNIKAKINRQGIWIEKLEHNPGKYIPEELRKAGEGEAVR VDLNRPMKEILAQLSQYPVSTRLSLNGTIIVGRDIAHAKLKERMDNGEGLPQYIKDHPIY YAGPAKTPEGYASGSLGPTTAGRMDSYVDQLQAQGGSMIMLAKGNRSQQVTDACKKHGGF YLGSIGGPAAVLAQGSIKSLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIQL TQCTRCVK >gi|299857062|gb|ADWS01000002.1| GENE 140 131080 - 132255 1304 391 aa, chain + ## HITS:1 COG:manA KEGG:ns NR:ns ## COG: manA COG1482 # Protein_GI_number: 16129571 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Escherichia coli K12 # 1 391 1 391 391 744 99.0 0 MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKSSSRVQNAAGDIVSLRD VIESNKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNKRNSEIGFAKENAAGIPMD AAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQPVAGAHPAIAHFLQQPNAERL SELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIRLISEFYPEDSGLFSPLLLNVVK LNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAGLTPKYIDIPELVANVKFEAKPANQ LLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETTISQQSAAILFCVEGDATLWKGSQQLQ LKPGESAFIAANESPVTVKGHGRLARVYNKL >gi|299857062|gb|ADWS01000002.1| GENE 141 132356 - 133864 1599 502 aa, chain + ## HITS:1 COG:ECs2320 KEGG:ns NR:ns ## COG: ECs2320 COG5339 # Protein_GI_number: 15831574 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 502 1 502 502 917 99.0 0 MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNY HRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQT TLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLKPLNYEQKDEKVAFSGGEFQL NADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLE KMTISVEDKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVG QIDGEAWHQFSQQYNAQTQALLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAP LSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVKSLDAKLTIPVDMATEFMTQV AKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYTNGQITLNGQKMPLE DFVGMFAMPALNVPVVPAIPQQ >gi|299857062|gb|ADWS01000002.1| GENE 142 133909 - 135174 997 421 aa, chain - ## HITS:1 COG:no KEGG:JW1607 NR:ns ## KEGG: JW1607 # Name: uidC # Def: predicted outer membrane porin protein # Organism: E.coli_J # Pathway: not_defined # 1 421 1 421 421 824 100.0 0 MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQ GGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENS LLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTPNIDLWGMWRSRVFL WTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRH AMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDV RIEGTGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSTLGDRLNYWDVKMSIQYDFML K >gi|299857062|gb|ADWS01000002.1| GENE 143 135213 - 136586 1419 457 aa, chain - ## HITS:1 COG:ECs2323 KEGG:ns NR:ns ## COG: ECs2323 COG2211 # Protein_GI_number: 15831577 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 831 99.0 0 MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVASVGAAAAGTMLLLVRVFDAFA DVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHGSKVVYAYLTYMGLG LCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVS VYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLKISLQTLKRNRPLFMLCIGALCV LISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIG ALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIE GLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLA FVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLISDITN >gi|299857062|gb|ADWS01000002.1| GENE 144 136583 - 138394 1791 603 aa, chain - ## HITS:1 COG:uidA KEGG:ns NR:ns ## COG: uidA COG3250 # Protein_GI_number: 16129575 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 1 603 1 603 603 1267 99.0 0 MLRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRAIAVPGSFNDQFADADI RNYVGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEVMEHQGGYTPFEADVTP YVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSYFHDFFNYAGIHRSVMVYTTP NTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRDADQQVVATGQGTSGTLQVVNPH LWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAVKGEQFLINHKPFYFTGFGRHEDAD LRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWADEHGIVVIDETAAVGFNLS LGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQG AREYFAPLAEATRKLDPTRPITCVNVMFCDAHTDTISDLFDVLCLNRYYGWYVQSGDLET AEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRV SAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQG GKQ >gi|299857062|gb|ADWS01000002.1| GENE 145 138782 - 139369 603 195 aa, chain - ## HITS:1 COG:ECs2326 KEGG:ns NR:ns ## COG: ECs2326 COG1309 # Protein_GI_number: 15831580 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 195 2 196 196 359 99.0 2e-99 MDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQA IILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAM LKNKHMTITEFVAQRMRDAQQKGEISPDINTSMTSRLLLDLTYGVLADIEAEDLAREASF AQGLRAMIGGILTAS >gi|299857062|gb|ADWS01000002.1| GENE 146 139601 - 140368 245 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 12 248 4 238 242 99 29 2e-19 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG QAFACRCDITSEQELSALADFAVSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVF SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK NIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVS GQILTVSGGGVQELN >gi|299857062|gb|ADWS01000002.1| GENE 147 140480 - 141508 759 342 aa, chain - ## HITS:1 COG:ECs2328 KEGG:ns NR:ns ## COG: ECs2328 COG1609 # Protein_GI_number: 15831582 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 644 100.0 0 MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAAIEELGFVRNRQASALR GGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHGGKDGEQLAQRFSLLLNQG VDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVDTVRPDNMQAAQLLTEHLIRN GHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSDWVLECTSSQKQAAEAITALLRH NPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDRYFEQQVSLAAFTDATPTTLDDIPV TWASTPARELGTTLADRMMQKITHEETHSRNLIIPARLIAAK >gi|299857062|gb|ADWS01000002.1| GENE 148 141683 - 143275 1581 530 aa, chain + ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 450 1 450 450 846 99.0 0 MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPVLGNPVLQ AIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGFVGYAVMNLAVNFWLTNKG ILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWMLHERFHNIRLPDALAFFGGT RFVPIISSLVMGLIGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLH HILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTTHGFSESATRFLSQGKMPAFLG GLPGAALAMYHCARPENRHKIKGLLISGLIACVVGGTTEPLEFLFLFVAPVLYVIHALLT GLGFTVMSVLGVTIGNTDGNIIDFVVFGILHGLSTKWYMVPVVAAIWFVVYYVIFRFAIT RFNLKTPGRDSEVASSIEKAVAGAPGKSGYNVPAILEALGGADNIVSLDNCITRLRLSVK DMSLVNVQALKDNRAIGVVQLNQHNLQVVIGPQVQSVKDEMAGLMHTVQA >gi|299857062|gb|ADWS01000002.1| GENE 149 143285 - 144457 968 390 aa, chain + ## HITS:1 COG:malY KEGG:ns NR:ns ## COG: malY COG1168 # Protein_GI_number: 16129580 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Escherichia coli K12 # 1 390 1 390 390 816 98.0 0 MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAPCIIEALNQRLMHGVFG YSRWKNDEFLAAIAHWFSTQHYTAIDTQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPA YDAFYKAIEGNQRTVMPVALEKQADDWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPAL TGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRVYLKDNLT YISDKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEG RGFVRLNAGCPRSKLEKGVAGLINAIRAVR >gi|299857062|gb|ADWS01000002.1| GENE 150 144561 - 145562 1094 333 aa, chain + ## HITS:1 COG:add KEGG:ns NR:ns ## COG: add COG1816 # Protein_GI_number: 16129581 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Escherichia coli K12 # 1 333 1 333 333 655 100.0 0 MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFL TKLDWGVKVLASLDACRRVAFENIEDAARHGLHYVELRFSPGYMAMAHQLPVAGVVEAVI DGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHRDQITALDLAGDELGFPGSLF LSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQI GIESCLTSNIQTSTVAELAAHPLKTFLEHGIRASINTDDPGVQGVDIIHEYTVAAPAAGL SREQIRQAQINGLEMAFLSAEEKRALREKVAAK >gi|299857062|gb|ADWS01000002.1| GENE 151 145597 - 146637 933 346 aa, chain - ## HITS:1 COG:ECs2332 KEGG:ns NR:ns ## COG: ECs2332 COG0673 # Protein_GI_number: 15831586 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli O157:H7 # 1 346 14 359 359 682 99.0 0 MSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVKADWPTVTVVSEPKHLF NDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSV FHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVRDRWREQGGPGSGIWYDLAPH LLDQAITLFGLPVSMTVDLAQLRPGEQSTDYFHAILSYPQRRVILHGTMLAAAESARYIV HGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYP AYYAAIRDALNGDGENPVPASQAIQVMELIELGIESAKHRATLCLA >gi|299857062|gb|ADWS01000002.1| GENE 152 146850 - 147005 81 51 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1792 NR:ns ## KEGG: EC55989_1792 # Name: blr # Def: beta-lactam resistance membrane protein # Organism: E.coli_55989 # Pathway: not_defined # 1 51 16 66 66 92 100.0 6e-18 MDQSREMWAVMNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK >gi|299857062|gb|ADWS01000002.1| GENE 153 147278 - 147493 254 71 aa, chain + ## HITS:1 COG:no KEGG:G2583_2020 NR:ns ## KEGG: G2583_2020 # Name: cnu # Def: OriC-binding nucleoid-associated protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 71 1 71 71 133 100.0 3e-30 MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAADHRRAELVSGGRLFDLG QVPKSVWHYVQ >gi|299857062|gb|ADWS01000002.1| GENE 154 147579 - 148019 391 146 aa, chain + ## HITS:1 COG:no KEGG:SSON_1532 NR:ns ## KEGG: SSON_1532 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 146 9 154 154 203 99.0 1e-51 MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTATLSSPQTFQTLGGQALTTQILWGV SFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAVKAFAFSPVEDGIAVRQLL FTLLATALIVPYFKRSSRVKATFVNP >gi|299857062|gb|ADWS01000002.1| GENE 155 148096 - 148677 586 193 aa, chain + ## HITS:1 COG:ECs2336 KEGG:ns NR:ns ## COG: ECs2336 COG4657 # Protein_GI_number: 15831590 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 285 100.0 3e-77 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA LLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM SLAFMGFSGLVKL >gi|299857062|gb|ADWS01000002.1| GENE 156 148677 - 149255 463 192 aa, chain + ## HITS:1 COG:ECs2337 KEGG:ns NR:ns ## COG: ECs2337 COG2878 # Protein_GI_number: 15831591 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Escherichia coli O157:H7 # 1 192 1 192 192 366 100.0 1e-101 MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPY AEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQELTPARMVAVIDENNCIGC TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNT IPVRIIPVEHHA >gi|299857062|gb|ADWS01000002.1| GENE 157 149248 - 151566 2182 772 aa, chain + ## HITS:1 COG:ECs2338 KEGG:ns NR:ns ## COG: ECs2338 COG4656 # Protein_GI_number: 15831592 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Escherichia coli O157:H7 # 1 772 1 772 772 1159 97.0 0 MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVS VGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADGEDCWIP RDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYIT ADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLAESNDISLRVIP TKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPITERVVTLT GEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMGFTLPWLDVPVVKITNCL LAPSANELGEPQEEQSCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADCIECG ACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLERHKS AAVQPAAKDKDAIAAALARVKEKQAQATQPIVIKAGERPDNSAIIAAREARKAQARAKQA ELQQTNDAATVADPRKTAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKA RKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIA RAKARKLEQQQSNAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVE AAIARAKARKLEQQQTNAEPEEQVDPRKAAVAAAIARAQAKKAAQQKVVNED >gi|299857062|gb|ADWS01000002.1| GENE 158 151567 - 152625 853 352 aa, chain + ## HITS:1 COG:ECs2339 KEGG:ns NR:ns ## COG: ECs2339 COG4658 # Protein_GI_number: 15831593 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Escherichia coli O157:H7 # 1 352 1 352 352 632 99.0 0 MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGLWLLWQKAI RWHIPLSFLVTLALCATLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG >gi|299857062|gb|ADWS01000002.1| GENE 159 152629 - 153249 571 206 aa, chain + ## HITS:1 COG:ydgP KEGG:ns NR:ns ## COG: ydgP COG4659 # Protein_GI_number: 16129589 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Escherichia coli K12 # 1 206 1 206 206 393 100.0 1e-109 MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKALFDQVLPAERYNNALA QSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSGAIQLLVGADFNGTVLGTR VTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAVKKDGGDFDQFTGATITPRAV VNAVKRAGLYAQTLPAQLSQLPACGE >gi|299857062|gb|ADWS01000002.1| GENE 160 153253 - 153948 746 231 aa, chain + ## HITS:1 COG:ECs2341 KEGG:ns NR:ns ## COG: ECs2341 COG4660 # Protein_GI_number: 15831595 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 398 100.0 1e-111 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRTEAAAERALPNGETGNV >gi|299857062|gb|ADWS01000002.1| GENE 161 153948 - 154583 605 211 aa, chain + ## HITS:1 COG:nth KEGG:ns NR:ns ## COG: nth COG0177 # Protein_GI_number: 16129591 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Escherichia coli K12 # 1 211 1 211 211 426 100.0 1e-119 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI >gi|299857062|gb|ADWS01000002.1| GENE 162 154711 - 154911 99 66 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C1824 NR:ns ## KEGG: UTI89_C1824 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 66 1 66 66 109 100.0 2e-23 MQVNCFFNSEIFYSFVIKITMLWQCKNIARIRLKSFKFTHATNIDLQNITLAIFQKLDYL TRKNAK >gi|299857062|gb|ADWS01000002.1| GENE 163 155194 - 156696 1587 500 aa, chain + ## HITS:1 COG:ydgR KEGG:ns NR:ns ## COG: ydgR COG3104 # Protein_GI_number: 16129592 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 487 1 487 500 878 99.0 0 MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSI TLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMA AIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKYGWS VAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINYRNLLLTIIGVVALIAIATWLLH NQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLN FFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSPILAAIYNKMGDTLPMPTKFAIGMVMC SGAFLILPLGAKFASDAGIVSVSWLVASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIM GSWFLTTAGANLIGGYVAGMMAVPDNVTDPLMSLEVYGRVFLQIGVATAIIAVLMLLTAP KLHRMTQDDAADKAAKAAVA >gi|299857062|gb|ADWS01000002.1| GENE 164 156802 - 157407 705 201 aa, chain + ## HITS:1 COG:ECs2344 KEGG:ns NR:ns ## COG: ECs2344 COG0625 # Protein_GI_number: 15831598 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 389 100.0 1e-108 MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVNPKGQVPALLLDDG TLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIATELHKGFTPLFRPDTPEE YKPTVRAQLEKKLQYVNEALKDEHWICGQRFTIADAYLFTVLRWAYAVKLNLEGLEHIAA FMQRMAERPEVQDALSAEGLK >gi|299857062|gb|ADWS01000002.1| GENE 165 157451 - 158311 839 286 aa, chain - ## HITS:1 COG:pdxY KEGG:ns NR:ns ## COG: pdxY COG2240 # Protein_GI_number: 16129594 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Escherichia coli K12 # 1 286 2 287 287 567 99.0 1e-162 MKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPGHLT EIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKG CIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLV KHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGATLQ EALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAKPEHYFSATKL >gi|299857062|gb|ADWS01000002.1| GENE 166 158373 - 159647 826 424 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 4 421 7 414 418 322 41 8e-87 MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKR FQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENS AIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQG YDFACLNKQYDVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTE GGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQ YVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLM QALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCL ICWK >gi|299857062|gb|ADWS01000002.1| GENE 167 159776 - 160432 684 218 aa, chain - ## HITS:1 COG:pdxH KEGG:ns NR:ns ## COG: pdxH COG0259 # Protein_GI_number: 16129596 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Escherichia coli K12 # 1 218 1 218 218 430 99.0 1e-120 MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACEAKLADPTAMVVATVDE HAQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTLERQVMVIGKAER LSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGG FRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP >gi|299857062|gb|ADWS01000002.1| GENE 168 160491 - 160814 267 107 aa, chain - ## HITS:1 COG:STM1447 KEGG:ns NR:ns ## COG: STM1447 COG3895 # Protein_GI_number: 16764795 # Func_class: R General function prediction only # Function: Predicted periplasmic protein # Organism: Salmonella typhimurium LT2 # 1 107 3 109 109 189 83.0 1e-48 MKKLLLICLPVLLTGCSAFNQLVEHMQTATLEYQCDEKPLTVKLNNPRQEVSFVYDNQLL HLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNCQLQNPQR >gi|299857062|gb|ADWS01000002.1| GENE 169 160918 - 162027 780 369 aa, chain - ## HITS:1 COG:ydhH KEGG:ns NR:ns ## COG: ydhH COG2377 # Protein_GI_number: 16129598 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Escherichia coli K12 # 1 369 1 369 369 712 99.0 0 MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSLKQAVLDICQGQQLTLS QFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVWHEPTGVAPHTLQIGDNNQ IVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPTERRMVLNIGGIANLSLLIPG QPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGKVILPLLQNMLSDPYFSQPAPKS TGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAVTISEQVLLSGGCERLMVCGGGSRN PLLMARLAALLPGTEVTTTDAVGISGDDMEALAFAWLAWRTLAGLPGNLPSVTGASQETV LGAIFPANP >gi|299857062|gb|ADWS01000002.1| GENE 170 162301 - 162768 580 155 aa, chain + ## HITS:1 COG:slyB KEGG:ns NR:ns ## COG: slyB COG3133 # Protein_GI_number: 16129599 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein # Organism: Escherichia coli K12 # 1 155 1 155 155 212 99.0 2e-55 MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGTIVNVRPVQIQGGDDSN VIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGVQSAMNKTQGVELEIRKDD GNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR >gi|299857062|gb|ADWS01000002.1| GENE 171 162815 - 163255 367 146 aa, chain - ## HITS:1 COG:ECs2351 KEGG:ns NR:ns ## COG: ECs2351 COG1846 # Protein_GI_number: 15831605 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 146 1 146 146 241 100.0 4e-64 MKLESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGI EQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISEMEAVINKTRAEILHGI SAEELEQLITLIAKLEHNIIELQAKG >gi|299857062|gb|ADWS01000002.1| GENE 172 163450 - 163686 123 78 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1934 NR:ns ## KEGG: ECUMN_1934 # Name: ydhI # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 78 1 78 78 105 100.0 4e-22 MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMD LSLFAICVCLALAILIAW >gi|299857062|gb|ADWS01000002.1| GENE 173 163776 - 164546 626 256 aa, chain + ## HITS:1 COG:ECs2353 KEGG:ns NR:ns ## COG: ECs2353 COG1566 # Protein_GI_number: 15831607 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli O157:H7 # 1 256 44 299 299 490 98.0 1e-139 MQSPWTRDGKIRAEKVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQA QLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQL AQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQ ITLYSDNKTLRGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPG DVTLVSGTTCSIAVGQ >gi|299857062|gb|ADWS01000002.1| GENE 174 164546 - 166558 1285 670 aa, chain + ## HITS:1 COG:ydhK KEGG:ns NR:ns ## COG: ydhK COG1289 # Protein_GI_number: 16129603 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 670 1 670 670 1208 99.0 0 MNASSWSLRNLPWFKATLAQWRYALRNTIAMCLALTVAYYLNLDEPYWAMTSAAVVSFPT VGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSAWLGFCTWACAHFTNNVAY AFQLAGYTAAIIAFPMVNITEASQLWDIAQARVCEVIVGILCGGMMMMILPSSSDATALL TALKNMHARLLEHASLLWQPETNDAIRAAHEGVIGQILTMNLLRIQAFWSHYRFRQQNAR LNALLHQQLRMTSVISSLRRMLLNWPSPPGATREILEQLLTALASSQTDAYTVARIIAPL RPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRLQSGVDDHARLARTSALARHTDNAEAM WSGLRTFCTLMMIGAWSIASQWDAGANALTLAAISCVLYSAVAAPFKSLSLLMRTLVLLS LFSFVVKFGLMVQISDLWQFLLFLFPLLATMQLLKLQMPKFAALWGQLIVFMGSFIAVTN PPVYDFADFLNDNLAKIVGVALAWLAFAILRPGSDARKSRRHIRALRRDFVDQLSRHPTL SESEFESLTYHHVSQLSNSQDALARRWLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVRD NCISLLRGVMSERGVQQKSLAATLEELQRICDSLARHHQPAARELAAIVWRLYCSLSQLE QAPPQGTLAS >gi|299857062|gb|ADWS01000002.1| GENE 175 166559 - 167095 695 178 aa, chain - ## HITS:1 COG:ECs2355 KEGG:ns NR:ns ## COG: ECs2355 COG2032 # Protein_GI_number: 15831609 # Func_class: P Inorganic ion transport and metabolism # Function: Cu/Zn superoxide dismutase # Organism: Escherichia coli O157:H7 # 6 178 1 173 173 301 100.0 3e-82 MNGGPMKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPD LKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPA LVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK >gi|299857062|gb|ADWS01000002.1| GENE 176 167161 - 168057 1031 298 aa, chain - ## HITS:1 COG:ydhF KEGG:ns NR:ns ## COG: ydhF COG4989 # Protein_GI_number: 16129605 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Escherichia coli K12 # 1 298 1 298 298 606 99.0 1e-173 MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQC EAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATD HLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQ VEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQQLRDELAVVAEELNAG SIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYDVP >gi|299857062|gb|ADWS01000002.1| GENE 177 168448 - 169047 527 199 aa, chain + ## HITS:1 COG:ydhM KEGG:ns NR:ns ## COG: ydhM COG1309 # Protein_GI_number: 16129607 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 199 1 199 199 390 99.0 1e-109 MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGSFYHYFRSKEAFGVAML ERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGTINGCLTVKLSAEVCDLSE DMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQAQVLYALWLGANLQAKISRSF EPLENALAHVKNIIATPAV >gi|299857062|gb|ADWS01000002.1| GENE 178 169084 - 170181 1150 365 aa, chain + ## HITS:1 COG:nemA KEGG:ns NR:ns ## COG: nemA COG1902 # Protein_GI_number: 16129608 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli K12 # 1 365 1 365 365 697 99.0 0 MSSEKLYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRASAGLIISEAT QISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQLWHTGRISHASLQPGGQAP VAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGIVNDFRQAIANAREAGFDLVE LHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEVVDAGIEEWGADRIGIRVSPIGT FQNTDNGAKEEADALYLIEQLGKRGIAYLHMSEPDWAGGEPYTDAFREKVRARFHGPIIG AGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAESFYGGGAEGYT DYPTL >gi|299857062|gb|ADWS01000002.1| GENE 179 170262 - 170669 216 135 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 2 127 4 126 126 87 38 5e-16 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN WGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYK IELIEEKDAGRGLGN >gi|299857062|gb|ADWS01000002.1| GENE 180 170772 - 171419 708 215 aa, chain + ## HITS:1 COG:ECs2361 KEGG:ns NR:ns ## COG: ECs2361 COG0847 # Protein_GI_number: 15831615 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 441 100.0 1e-124 MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHF HVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKVVRKGIKASGCNRAIMVAH NANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALGQTVLSKACQTAGMDFDSTQA HSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV >gi|299857062|gb|ADWS01000002.1| GENE 181 171512 - 176128 3171 1538 aa, chain + ## HITS:1 COG:lhr KEGG:ns NR:ns ## COG: lhr COG1201 # Protein_GI_number: 16129611 # Func_class: R General function prediction only # Function: Lhr-like helicases # Organism: Escherichia coli K12 # 1 1538 1 1538 1538 2909 99.0 0 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARSEHALVIAPTGSGKTLA AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQLPLKGIADERRRRG ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMEALQVD EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL LAVTSGGTIPDRGMYSVLLPEGEEQAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN TIANIQGLIDEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWALAIAGR IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKDEEGLFDLLRELGPMTVEDLAQRH TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPLVSYNTPN LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG >gi|299857062|gb|ADWS01000002.1| GENE 182 176179 - 176526 521 115 aa, chain - ## HITS:1 COG:ECs2363 KEGG:ns NR:ns ## COG: ECs2363 COG0278 # Protein_GI_number: 15831617 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Escherichia coli O157:H7 # 1 115 1 115 115 225 100.0 1e-59 MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQNPDIRA ELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKETAAKYKSEEPDAE >gi|299857062|gb|ADWS01000002.1| GENE 183 176861 - 177676 483 271 aa, chain + ## HITS:1 COG:ydhO KEGG:ns NR:ns ## COG: ydhO COG0791 # Protein_GI_number: 16129613 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli K12 # 1 271 1 271 271 422 100.0 1e-118 MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTA KKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASASFTEKCTKRKGYKSHCVK VKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGGSSPRTGFDCSGLVYYAYKDL VKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRT GQEIQITSLSEDYWQRHYVGARRVMTPKTLR >gi|299857062|gb|ADWS01000002.1| GENE 184 177804 - 178385 462 193 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 193 1 199 201 182 44 1e-44 MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS EGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFG SGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWA LVNWEFVAKNLAA >gi|299857062|gb|ADWS01000002.1| GENE 185 178531 - 179700 1203 389 aa, chain - ## HITS:1 COG:ydhP KEGG:ns NR:ns ## COG: ydhP COG2814 # Protein_GI_number: 16129615 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 389 1 389 389 569 99.0 1e-162 MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLM TLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAAS VVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSL PKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSIAHATPVFVT AMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVW GAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPV MGAIVAGLALLLVFMSARKQPETVCVANS >gi|299857062|gb|ADWS01000002.1| GENE 186 179866 - 179955 125 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSTDLKFSLVTTIIVLGLIVAVGLTAALH >gi|299857062|gb|ADWS01000002.1| GENE 187 180254 - 181279 1077 341 aa, chain + ## HITS:1 COG:ECs2367 KEGG:ns NR:ns ## COG: ECs2367 COG1609 # Protein_GI_number: 15831621 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 700 100.0 0 MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK SIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLL VMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHRE IGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRP TAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGET AFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR >gi|299857062|gb|ADWS01000002.1| GENE 188 181276 - 182208 612 310 aa, chain - ## HITS:1 COG:ECs2368 KEGG:ns NR:ns ## COG: ECs2368 COG0583 # Protein_GI_number: 15831622 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 622 100.0 1e-178 MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTA AGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDD VELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLAL MDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMV PTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLR EPEETPATGD >gi|299857062|gb|ADWS01000002.1| GENE 189 182321 - 183532 1136 403 aa, chain + ## HITS:1 COG:ECs2369 KEGG:ns NR:ns ## COG: ECs2369 COG0477 # Protein_GI_number: 15831623 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 403 1 403 403 706 99.0 0 MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLL WGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVT DYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWL KPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVI GLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEIL IPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTP LLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH >gi|299857062|gb|ADWS01000002.1| GENE 190 183823 - 184971 1012 382 aa, chain + ## HITS:1 COG:cfa KEGG:ns NR:ns ## COG: cfa COG2230 # Protein_GI_number: 16129619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Escherichia coli K12 # 1 382 1 382 382 809 99.0 0 MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGE SYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIASARLFNLQSKKRAWIVGKEHY DLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGG LAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEH VGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQS SEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRA RDIQLWQVVFSRGVENGLRVAR >gi|299857062|gb|ADWS01000002.1| GENE 191 185011 - 185652 710 213 aa, chain - ## HITS:1 COG:ribC KEGG:ns NR:ns ## COG: ribC COG0307 # Protein_GI_number: 16129620 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Escherichia coli K12 # 1 213 1 213 213 426 100.0 1e-119 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVS FDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQ IWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARV NIEIDPQTQAVVDTVERVLAARENAMNQPGTEA >gi|299857062|gb|ADWS01000002.1| GENE 192 185867 - 187240 1462 457 aa, chain + ## HITS:1 COG:ECs2372 KEGG:ns NR:ns ## COG: ECs2372 COG0534 # Protein_GI_number: 15831626 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 798 99.0 0 MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILF GHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENID PALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIY GHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQ LGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVG YRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLL AAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAG FWIGFIIGLTSAAIMMMLRMRFLQRLPSVIILQRASR >gi|299857062|gb|ADWS01000002.1| GENE 193 187281 - 188537 903 418 aa, chain - ## HITS:1 COG:ydhQ KEGG:ns NR:ns ## COG: ydhQ COG3468 # Protein_GI_number: 16129622 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 1 418 1 418 418 695 99.0 0 MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIA KCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLE NGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVF MLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRA EVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADL QQSTITVQQGGVLILDGSTVKGDGVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEG AICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA >gi|299857062|gb|ADWS01000002.1| GENE 194 189110 - 189415 330 101 aa, chain + ## HITS:1 COG:no KEGG:SSON_1489 NR:ns ## KEGG: SSON_1489 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 101 1 101 101 191 100.0 8e-48 MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEK SALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA >gi|299857062|gb|ADWS01000002.1| GENE 195 189541 - 191145 957 534 aa, chain + ## HITS:1 COG:ydhS KEGG:ns NR:ns ## COG: ydhS COG4529 # Protein_GI_number: 16129624 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 534 1 534 534 1078 99.0 0 MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASI EIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQ KFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSP WSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFNRDNASEKLNITL MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWS QRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAV QEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEI NESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD >gi|299857062|gb|ADWS01000002.1| GENE 196 191157 - 191969 242 270 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1836 NR:ns ## KEGG: EC55989_1836 # Name: ydhT # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 270 1 270 270 519 100.0 1e-146 MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLA DENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGY SVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVAS NGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGER VRFAVAIEGENNIRTGVRYRLNEQHQFVEC >gi|299857062|gb|ADWS01000002.1| GENE 197 191973 - 192758 616 261 aa, chain - ## HITS:1 COG:ydhU KEGG:ns NR:ns ## COG: ydhU COG4117 # Protein_GI_number: 16129626 # Func_class: C Energy production and conversion # Function: Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) # Organism: Escherichia coli K12 # 1 261 1 261 261 481 99.0 1e-136 MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSAT DHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLA CWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQ QVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYL CTTGRTPHETFKSMVDGYHRH >gi|299857062|gb|ADWS01000002.1| GENE 198 192755 - 193423 207 222 aa, chain - ## HITS:1 COG:ECs2378 KEGG:ns NR:ns ## COG: ECs2378 COG0437 # Protein_GI_number: 15831632 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 222 18 239 239 456 99.0 1e-128 MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTN HVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVE KSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGR EDSPEIQVWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV >gi|299857062|gb|ADWS01000002.1| GENE 199 193487 - 194125 469 212 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_1887 NR:ns ## KEGG: EcE24377A_1887 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 212 4 215 215 374 100.0 1e-102 MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAV FLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQ DICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESS TAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP >gi|299857062|gb|ADWS01000002.1| GENE 200 194138 - 196240 2002 700 aa, chain - ## HITS:1 COG:ydhV KEGG:ns NR:ns ## COG: ydhV COG2414 # Protein_GI_number: 16129629 # Func_class: C Energy production and conversion # Function: Aldehyde:ferredoxin oxidoreductase # Organism: Escherichia coli K12 # 1 699 1 699 700 1497 100.0 0 MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVF ATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSP VWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSR NHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTP QSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKY TVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGR VIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNF IKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQ VGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIK YAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDL AAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLT MFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV >gi|299857062|gb|ADWS01000002.1| GENE 201 196261 - 196887 361 208 aa, chain - ## HITS:1 COG:ECs2381 KEGG:ns NR:ns ## COG: ECs2381 COG0437 # Protein_GI_number: 15831635 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 366 99.0 1e-101 MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGV LVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTA DTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKS SKCVLCGECANACPTGALKIIKWKDITV >gi|299857062|gb|ADWS01000002.1| GENE 202 197343 - 197552 221 69 aa, chain - ## HITS:1 COG:no KEGG:LF82_2868 NR:ns ## KEGG: LF82_2868 # Name: ydhZ # Def: uncharacterized protein YdhZ # Organism: E.coli_LF82 # Pathway: not_defined # 1 69 1 69 69 109 100.0 3e-23 MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAM ETVINALVK >gi|299857062|gb|ADWS01000002.1| GENE 203 198109 - 199521 1477 470 aa, chain + ## HITS:1 COG:ECs2383 KEGG:ns NR:ns ## COG: ECs2383 COG0469 # Protein_GI_number: 15831637 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Escherichia coli O157:H7 # 1 470 1 470 470 884 100.0 0 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKT AAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVG NTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIF GCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVAN AILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCR GAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLV KEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL >gi|299857062|gb|ADWS01000002.1| GENE 204 199832 - 200068 331 78 aa, chain + ## HITS:1 COG:ECs2384 KEGG:ns NR:ns ## COG: ECs2384 COG4238 # Protein_GI_number: 15831638 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein lipoprotein # Organism: Escherichia coli O157:H7 # 1 78 1 78 78 105 100.0 2e-23 MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKD DAARANQRLDNMATKYRK >gi|299857062|gb|ADWS01000002.1| GENE 205 200132 - 201136 738 334 aa, chain - ## HITS:1 COG:ynhG KEGG:ns NR:ns ## COG: ynhG COG1376 # Protein_GI_number: 16129634 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 334 1 334 334 606 99.0 1e-173 MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDT AAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVY PIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPV SVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ >gi|299857062|gb|ADWS01000002.1| GENE 206 201289 - 201702 468 137 aa, chain - ## HITS:1 COG:ynhA KEGG:ns NR:ns ## COG: ynhA COG2166 # Protein_GI_number: 16129635 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Escherichia coli K12 # 1 125 1 125 138 247 99.0 5e-66 MAVLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSPQNSIQGCQSQVWIVMR QNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRS QGLEANDSRNSRQSRCT >gi|299857062|gb|ADWS01000002.1| GENE 207 201715 - 202935 1278 406 aa, chain - ## HITS:1 COG:csdB KEGG:ns NR:ns ## COG: csdB COG0520 # Protein_GI_number: 16129636 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Escherichia coli K12 # 1 406 1 406 406 824 99.0 0 MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDSEAEFYRHGYAAVHRGIHT LSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQ MEHHANIVPWQMLCARVGTELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTE NPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLN NIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRT GHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLLG >gi|299857062|gb|ADWS01000002.1| GENE 208 202932 - 204203 1019 423 aa, chain - ## HITS:1 COG:ECs2388 KEGG:ns NR:ns ## COG: ECs2388 COG0719 # Protein_GI_number: 15831642 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli O157:H7 # 1 423 1 423 423 795 98.0 0 MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLEGLTNS QFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSDATEGSGYEVSINDDRQGVPDA IQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHLDLAEG AEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDAT AFSHSFLLGGAVFRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQL HKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSH GATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQRLPG GAR >gi|299857062|gb|ADWS01000002.1| GENE 209 204178 - 204924 761 248 aa, chain - ## HITS:1 COG:ECs2389 KEGG:ns NR:ns ## COG: ECs2389 COG0396 # Protein_GI_number: 15831643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 487 100.0 1e-138 MLSIKDLHVSVEDKAILRGLSLDVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTV EFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDF QDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDA LKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQG YGWLTEQQ >gi|299857062|gb|ADWS01000002.1| GENE 210 204934 - 205200 342 88 aa, chain - ## HITS:1 COG:ECs2390 KEGG:ns NR:ns ## COG: ECs2390 COG0719 # Protein_GI_number: 15831644 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli O157:H7 # 1 88 421 508 508 187 100.0 5e-48 MLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFC KDVFSELPLEFAVEAQKLLAISLEHSVG >gi|299857062|gb|ADWS01000002.1| GENE 211 205254 - 206459 951 401 aa, chain - ## HITS:1 COG:ynhE KEGG:ns NR:ns ## COG: ynhE COG0719 # Protein_GI_number: 16129639 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli K12 # 1 389 1 389 508 799 97.0 0 MWLWRKLWGIGGTMSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAIS AKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEP GAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFC SFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRI NAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNW FPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVA LTSGHQQADTGTKMIHIGKTPNRPLSRKGSLPDIVRTVIAA >gi|299857062|gb|ADWS01000002.1| GENE 212 206429 - 206797 498 122 aa, chain - ## HITS:1 COG:ydiC KEGG:ns NR:ns ## COG: ydiC COG0316 # Protein_GI_number: 16129640 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 122 1 122 122 252 100.0 9e-68 MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLGVKQTGCAGFGYVLDSV SEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQIFKFHNPKAQNECGCGESF GV >gi|299857062|gb|ADWS01000002.1| GENE 213 207345 - 207533 297 62 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E1886 NR:ns ## KEGG: SbBS512_E1886 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 62 28 89 89 109 100.0 2e-23 MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLG VH >gi|299857062|gb|ADWS01000002.1| GENE 214 207633 - 208043 309 136 aa, chain - ## HITS:1 COG:ydiI KEGG:ns NR:ns ## COG: ydiI COG2050 # Protein_GI_number: 16129642 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 136 1 136 136 276 100.0 9e-75 MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVV LAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGVCKPLHLGSRHQVWQIEIFD EKGRLCCSSRLTTAIL >gi|299857062|gb|ADWS01000002.1| GENE 215 208040 - 211096 2550 1018 aa, chain - ## HITS:1 COG:ydiJ_1 KEGG:ns NR:ns ## COG: ydiJ_1 COG0277 # Protein_GI_number: 16129643 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli K12 # 1 542 1 542 542 1121 99.0 0 MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTDNSIYQLLPDAVVFPRS TADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVDMSRHMNRIIEINPEEGWV RVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGV RAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVYQRCRQQRQLIIDNFPKLNRFLT GYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARLDITPLPKVRRLVNVKYDSFDSALR NAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDVPDKEMLGLNIVEFAGDDEAL IDERVNALCVRLDELIASQQAGVIGWQVCRELAGVERIYAMRKKAVGLLGNAKGAAKPIP FAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKQ ISDDVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEELFAELRKVKAAFDPHNRLNPGKIC PPEGLDAPMMKMDAVKRGTFDRQIPIAVRQQWRGAMECNGNGLCFNFDARSPMCPSMKIT QNRIHSPKGRATLVREWLRLLADRGVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEY DFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYA PLMARAPKTFNFFINQPLVRKLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESL NAEQKARTVLVVQDPFTSYYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRF AKTAKKTADFLNRMAKLGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASAL ESQPVATVSGESWYFFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHE AKNHKNSLGIYELSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK >gi|299857062|gb|ADWS01000002.1| GENE 216 211310 - 212422 1259 370 aa, chain + ## HITS:1 COG:ECs2395 KEGG:ns NR:ns ## COG: ECs2395 COG0628 # Protein_GI_number: 15831649 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 370 1 370 370 584 99.0 1e-167 MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMF GRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIG AKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSALLYWR GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTLDNVIRPMLI RMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEEILE ELGEIEKPNK >gi|299857062|gb|ADWS01000002.1| GENE 217 212851 - 213207 212 118 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_1905 NR:ns ## KEGG: EcE24377A_1905 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 118 10 127 127 241 99.0 4e-63 MNAYELQALRHIFAMTIDECATWIAETGDSESWRQWENGKCAIPERVVEQLLAMRQQRKK HLHAIIEKINNRIGNNTMRFFPDLTAFQRVYPDGNFIDWKIYQSVAAELYAHDLERLC >gi|299857062|gb|ADWS01000002.1| GENE 218 213307 - 214521 879 404 aa, chain + ## HITS:1 COG:ECs2397 KEGG:ns NR:ns ## COG: ECs2397 COG0477 # Protein_GI_number: 15831651 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 404 1 404 404 717 99.0 0 MKNPYYPTALGLYFNYLVHGMGVILMSLNMASLETLWQTNAAGVSIVISSLGIGRLSVLL FAGLLSDRFGRRPFIMLGMCCYMAFFFGILHTNNIIIAYVFGFLAGMANSFLDAGTYPSL MEAFPRSPGTANILIKAFVSSGQFLLPLIISLLVWAELWFGWSFMIAAGIMFINALFLYR CTFPPHPGHRLPVIKKTTSSTEHRCSIIDLASYTLYGYISMATFYLVSQWLAQYGQFVAG MSYTMSIKLLSIYTVGSLLCVFITAPLIRNTVRPTTLLMLYTFISFIALFTVCLHPTFYV VIIFAFVIGFTSAGGVVQIGLTLMAERFPYAKGKATGIYYSAGSIATFTIPLITAHLSQR SIADIMWFDTAIAAIGFLLALFIGLRSRKKTRHHSLKENVAPGG >gi|299857062|gb|ADWS01000002.1| GENE 219 214748 - 216013 820 421 aa, chain + ## HITS:1 COG:ydiN KEGG:ns NR:ns ## COG: ydiN COG0477 # Protein_GI_number: 16129647 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 421 3 423 423 719 99.0 0 MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMSSLAEKFSTDNAGIAYLISGIGLG RLISILFFGVISDKFGRRAVILMAVIMYLLFFFGIPACPNLTLAYGLAVCVGIANSALDT GGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYMLLNNIWYGYGLIIPGILFVLI TLMLLKSKFPSQLVDASVANELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYA MAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMVRPIWANVFNSALATITAAIIYLY PSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITG YLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGERKFSTRLNTIKHR G >gi|299857062|gb|ADWS01000002.1| GENE 220 216025 - 216891 869 288 aa, chain + ## HITS:1 COG:ydiB KEGG:ns NR:ns ## COG: ydiB COG0169 # Protein_GI_number: 16129648 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Escherichia coli K12 # 1 288 1 288 288 580 99.0 1e-166 MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALK MRGTGISMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGF DIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVT VTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTK LLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA >gi|299857062|gb|ADWS01000002.1| GENE 221 216922 - 217680 925 252 aa, chain + ## HITS:1 COG:aroD KEGG:ns NR:ns ## COG: aroD COG0710 # Protein_GI_number: 16129649 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Escherichia coli K12 # 1 252 1 252 252 446 99.0 1e-125 MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDILEWRVDHYADLSNVES VMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTG DDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSD VLTLLTATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVN DLRTVLTILHQA >gi|299857062|gb|ADWS01000002.1| GENE 222 217824 - 217979 124 51 aa, chain + ## HITS:1 COG:ECs2401 KEGG:ns NR:ns ## COG: ECs2401 COG4670 # Protein_GI_number: 15831655 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Escherichia coli O157:H7 # 1 46 1 46 531 96 97.0 1e-20 MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEATTFWKPPR >gi|299857062|gb|ADWS01000002.1| GENE 223 218102 - 219436 1319 444 aa, chain + ## HITS:1 COG:ECs2401 KEGG:ns NR:ns ## COG: ECs2401 COG4670 # Protein_GI_number: 15831655 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Escherichia coli O157:H7 # 1 444 88 531 531 892 99.0 0 MKWALCGHWGQSPRISELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDP RQQGGKLNEVTKEDLIKLVEFDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLD ALVIAQAVHNNGGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPDQSQLYGGAPVNR FISGDFTLDDSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVGIADGIGLVAREEGCADD FILTVETGPIGGITSQGIAFGANVNTRAILDMTSQFDFYHGGGLDVCYLSFAEVDQHGNV GVHKFNGKIMGTGGFIDISATSKKIIFCGTLTAGSLKTEIADGKLNIVQEGRVKKFIQEL PEITFSGKIALERELDVRYITERAVFTLKEDGLHLIEIAPGVDLQKDILDKMDFTPVISP ELKLMDERLFIDAAMGFVLPEAAH >gi|299857062|gb|ADWS01000002.1| GENE 224 219450 - 220601 1455 383 aa, chain + ## HITS:1 COG:ECs2402 KEGG:ns NR:ns ## COG: ECs2402 COG1960 # Protein_GI_number: 15831656 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 1 383 19 401 401 801 100.0 0 MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEF GGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSAEQLRKTAESTLETGDPAY ALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKA FTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEM ERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLK VAWQADQHQSLRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERI GGGTDEIMIYVAGRQILKDYQNK >gi|299857062|gb|ADWS01000002.1| GENE 225 220644 - 221555 593 303 aa, chain - ## HITS:1 COG:ydiP KEGG:ns NR:ns ## COG: ydiP COG2207 # Protein_GI_number: 16129652 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 303 1 303 303 619 99.0 1e-177 MYQRCFDNASETLFVAGKTPRLSRFAISDDPKWESGHHVHDNETELIYVKKGVARFTIDS SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS LAG >gi|299857062|gb|ADWS01000002.1| GENE 226 221871 - 222635 778 254 aa, chain + ## HITS:1 COG:ydiQ KEGG:ns NR:ns ## COG: ydiQ COG2086 # Protein_GI_number: 16129653 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli K12 # 1 254 1 254 254 464 99.0 1e-131 MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLATDDDEIAALTVG GSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAVEKIGFDLLIFGEGSG DLYAQQAGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDI NVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAELVGIRVPPQTERKHIIIDNDSPE AIAELAEHLKKALN >gi|299857062|gb|ADWS01000002.1| GENE 227 222655 - 223593 1018 312 aa, chain + ## HITS:1 COG:ECs2405 KEGG:ns NR:ns ## COG: ECs2405 COG2025 # Protein_GI_number: 15831659 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 619 99.0 1e-177 MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAVMPYGPKCIYVLEQNDA LQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQLNAALVNDATAVDIIDGHI CAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSHQCPTETVPYVAPRHEILCRE RRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERE RYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIY KVVPALISQLSR >gi|299857062|gb|ADWS01000002.1| GENE 228 223649 - 224938 1185 429 aa, chain + ## HITS:1 COG:ydiS KEGG:ns NR:ns ## COG: ydiS COG0644 # Protein_GI_number: 16129655 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli K12 # 1 429 1 429 429 822 98.0 0 MSEDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHH YAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSGHMVPEGGLAMVPQMVNDGVMIV GDAAGFCLNLGFTVRGMDLAIASAQAAATTVSAAKEREDFSASSLAQYKRELEQSCVMRD MQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQPVRKMIMGHAKKIGLINLLK DGIKGATAL >gi|299857062|gb|ADWS01000002.1| GENE 229 224935 - 225228 343 97 aa, chain + ## HITS:1 COG:ECs2407 KEGG:ns NR:ns ## COG: ECs2407 COG2440 # Protein_GI_number: 15831661 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 207 100.0 3e-54 MSQNATVNVDIKLGVNKFHVDEGHPHIILAANPDINEFRKLMKACPAGLYKQDDAGNIHF DSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG >gi|299857062|gb|ADWS01000002.1| GENE 230 225285 - 226931 1160 548 aa, chain + ## HITS:1 COG:ECs2408 KEGG:ns NR:ns ## COG: ECs2408 COG0318 # Protein_GI_number: 15831662 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 1 548 19 566 566 1114 99.0 0 MKVTLTFNEQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAA SCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKIGAVSVPLLPSWREAELVWVLNK CQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADNTPLT TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGH ATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPA DLSALRFFLCGGTTIPKKVARECQQLGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGY AAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCR MDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYV VLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTASGKIQKFLLRKDIMRRLT QDVCEEIE >gi|299857062|gb|ADWS01000002.1| GENE 231 226988 - 229366 2793 792 aa, chain - ## HITS:1 COG:ppsA KEGG:ns NR:ns ## COG: ppsA COG0574 # Protein_GI_number: 16129658 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Escherichia coli K12 # 1 792 1 792 792 1609 100.0 0 MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVSVPNGFATTADAFNQFL DQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQPELENAIREAYAQLSADDE NASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAVKHVFASLFNDRAISYRVHQG YDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQVVFITSAWGLGEMVVQGAVNPDE FYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHGKQVKIEDVPQEQRDIFSLTNEEVQ ELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPETVRSRGQVMERYTLHSQGKIIA EGRAIGHRIGAGPVKVIHDISEMNRIEPGDVLVTDMTDPDWEPIMKKASAIVTNRGGRTC HAAIIARELGIPAVVGCGDATERMKDGENVTVSCAEGDTGYVYAELLEFSVKSSSVETMP DLPLKVMMNVGNPDRAFDFACLPNEGVGLARLEFIINRMIGVHPRALLEFDDQEPQLQNE IREMMKGFDSPREFYVGRLTEGIATLGAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDE ENPMLGFRGAGRYVSDSFRDCFALECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEE LARQGLKRGENGLKIIMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVS ELFDERNDAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTV VQTWLSLAELKK >gi|299857062|gb|ADWS01000002.1| GENE 232 229699 - 230532 775 277 aa, chain + ## HITS:1 COG:ECs2410 KEGG:ns NR:ns ## COG: ECs2410 COG1806 # Protein_GI_number: 15831664 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 552 100.0 1e-157 MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIY HQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNP NNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAAN YPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEV EALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRMY >gi|299857062|gb|ADWS01000002.1| GENE 233 230689 - 231735 864 348 aa, chain + ## HITS:1 COG:aroH KEGG:ns NR:ns ## COG: aroH COG0722 # Protein_GI_number: 16129660 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli K12 # 1 348 1 348 348 721 100.0 0 MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEKILNGEDKRLLVIIGPC SIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNH GLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGAIGARTTESQIHREMASALSC PVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMTIYQTSGNPYGHIIMRGGKKPNY HADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRRQLEVCEDICQQIRNGSTAIAGIMA ESFLREGTQKIVGSQPLTYGQSITDPCLGWEDTERLVEKLASAVDTRF >gi|299857062|gb|ADWS01000002.1| GENE 234 231867 - 232058 179 63 aa, chain + ## HITS:1 COG:ECs2412 KEGG:ns NR:ns ## COG: ECs2412 COG4256 # Protein_GI_number: 15831666 # Func_class: P Inorganic ion transport and metabolism # Function: Hemin uptake protein # Organism: Escherichia coli O157:H7 # 1 63 1 63 63 106 98.0 1e-23 MRYTDSRKLTPETDANHKTASPQPIRRITSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLL LTK >gi|299857062|gb|ADWS01000002.1| GENE 235 232062 - 233498 1035 478 aa, chain - ## HITS:1 COG:ECs2413 KEGG:ns NR:ns ## COG: ECs2413 COG0397 # Protein_GI_number: 15831667 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 478 1 478 478 952 98.0 0 MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNDAGVWGGETL LPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDG RAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETVEPGAMLMRVAPSHLRFGH FEHFYYRREPEKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAH GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQT LSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLGFITEQKEDNALLNELFSLMARERSDY TRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRRRLQQDEVSDIERQQLMQSVNPA LVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS >gi|299857062|gb|ADWS01000002.1| GENE 236 233561 - 234274 147 237 aa, chain - ## HITS:1 COG:ECs2414 KEGG:ns NR:ns ## COG: ECs2414 COG2200 # Protein_GI_number: 15831668 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 476 97.0 1e-134 MKIFLENLYHSDCYFLPIRDNQQLLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQL FSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLDRDNYAGELLKYPFIELLINENYPH LNEGKDNRDLLSLSHMYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEP FIRAIQAQISPCCNCIIAGGIDTPEILAQITPFDFHALQGCLWPAVPINQITTLVQR >gi|299857062|gb|ADWS01000002.1| GENE 237 234521 - 234985 273 154 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 40 154 65 174 175 109 45 1e-22 MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGV DCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYD TNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI >gi|299857062|gb|ADWS01000002.1| GENE 238 235063 - 235800 617 245 aa, chain - ## HITS:1 COG:ECs2416 KEGG:ns NR:ns ## COG: ECs2416 COG4138 # Protein_GI_number: 15831670 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 245 5 249 249 454 99.0 1e-128 MQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLE AWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKTRTELLNDVAGALALDDKLGRST NQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQGL AIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPPNLAQAYGVNFRRLDIEGHRM LISTI >gi|299857062|gb|ADWS01000002.1| GENE 239 235812 - 236363 565 183 aa, chain - ## HITS:1 COG:ECs2417 KEGG:ns NR:ns ## COG: ECs2417 COG0386 # Protein_GI_number: 15831671 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 377 99.0 1e-105 MQDSILTTVVKDIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYEQLENIQKAWADRGFVV LGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGEGRHPLYQKLIAAAPTAVA PEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGLVIQRFSPDMTPEDPIVMESIKLA LAK >gi|299857062|gb|ADWS01000002.1| GENE 240 236426 - 237406 850 326 aa, chain - ## HITS:1 COG:btuC KEGG:ns NR:ns ## COG: btuC COG4139 # Protein_GI_number: 16129667 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, permease component # Organism: Escherichia coli K12 # 1 326 1 326 326 471 99.0 1e-133 MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWFSPRGELFVWQIRLPRT LAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLC AIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAIYFSTSVDLRQLMYWMM GGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGEISARQLGLPLWFWRNVLVAATG WMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADVVARLALAA AELPIGVVTATLGAPVFIWLLLKAGR >gi|299857062|gb|ADWS01000002.1| GENE 241 237507 - 237806 318 99 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG] # 3 92 4 93 96 127 66 7e-28 MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQR PGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE >gi|299857062|gb|ADWS01000002.1| GENE 242 237811 - 240198 2743 795 aa, chain - ## HITS:1 COG:ECs2420_2 KEGG:ns NR:ns ## COG: ECs2420_2 COG0072 # Protein_GI_number: 15831674 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Escherichia coli O157:H7 # 140 795 1 656 656 1291 99.0 0 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGDFKIKAAKLRGEPSEGMLC SFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVA VLNQLPLVEPEIVPVGATIDDTLPITVEAPEACPRYLGRVVKGINVEAPTPLWMKEKLRR CGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKLNAD TLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRY ERGVDPALQHKAMERATRLLIDICGGEAGPVIDITSEATLPKRATITLRRSKLDRLIGHH IADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDEPVQ ASLIMGTHREADLSLKRVKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALLLPSPISVE MSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNR YEEHWNLAKETVDFYDLKGDLESVLDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIG FVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPA ADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAK CVEALKERFQASLRD >gi|299857062|gb|ADWS01000002.1| GENE 243 240213 - 241196 1241 327 aa, chain - ## HITS:1 COG:ECs2421 KEGG:ns NR:ns ## COG: ECs2421 COG0016 # Protein_GI_number: 15831675 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 668 100.0 0 MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTTLRELPPEERPAAGAVI NEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFF GELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDATRLLRTQTSGVQIRTMKA QQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEEDLQ IRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGME RLTMLRYGVTDLRSFFENDLRFLKQFK >gi|299857062|gb|ADWS01000002.1| GENE 244 241646 - 242002 578 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15802128|ref|NP_288150.1| 50S ribosomal protein L20 [Escherichia coli O157:H7 EDL933] # 1 118 1 118 118 227 100 5e-58 MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQL WIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA >gi|299857062|gb|ADWS01000002.1| GENE 245 242055 - 242267 358 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 [Shigella flexneri 5 str. 8401] # 1 70 1 70 70 142 98 2e-32 MEVIKMPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDL GLVIACLPYA >gi|299857062|gb|ADWS01000002.1| GENE 246 242349 - 242828 665 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 158 2 159 159 260 81 4e-68 QEVRLTGLEGEQLGIVSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSS KEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIG MEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ >gi|299857062|gb|ADWS01000002.1| GENE 247 242895 - 244763 1803 622 aa, chain - ## HITS:1 COG:thrS KEGG:ns NR:ns ## COG: thrS COG0441 # Protein_GI_number: 16129675 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 622 21 642 642 1308 99.0 0 MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEDGLEIIRHSCAHLLG HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMK TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTT SSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFT QDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEAD LAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGE DNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSDYVNELTQ KLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMD VNEVIEKLQQEIRSRSLKQLEE >gi|299857062|gb|ADWS01000002.1| GENE 248 245346 - 246461 103 371 aa, chain + ## HITS:1 COG:b1721m KEGG:ns NR:ns ## COG: b1721m COG0666 # Protein_GI_number: 16132225 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli K12 # 1 371 1 371 632 713 95.0 0 MSQNDIIIRTHYKSPHRLHIDSDIPTPSSEPINKFARQLITLLDTSDLSSMLSYCVIQEF TANCRKISQNCYSTALFTINFATSPIHAENILITLHYKKDFISLLLETTPIKANHLRSIL DYIEQEQLTAEDRNHCMKLSKKIHREKTIHPTVNLNGSACFLQSPSDAIFCRHLSLQYAL DSLRNGKGKVNLIKHYSSVESIQQHIPLVRDAEFRALLRHPPAGSRVIASKDFGFALDIF FCRMMANNVSHMSAILYIDNHTLSVRLRIKQSVYGQLNYVVSVYDPNDTNVAVRGTHRTA RRFLSLDKFISSAPDAQTWADRYVRNCAIAILPLLPEGVPVAILAGITTRMPFAPIHPSA MLLIMATGQTQ >gi|299857062|gb|ADWS01000002.1| GENE 249 246600 - 247244 261 214 aa, chain + ## HITS:1 COG:ECs2427 KEGG:ns NR:ns ## COG: ECs2427 COG0666 # Protein_GI_number: 15831681 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli O157:H7 # 1 214 419 632 632 372 90.0 1e-103 MQEIQSLVYNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQEL LNKKMVMDILAMKTRDGEPGLFAAMENNHPLCATRFLSKVYGIAVKYKLSKINIMDLLKG ATAHGTPALYIAMSKGNKDVVLSYISTLSTFAKKYSFSQRQLFTLLAAKNHENMSAVHIA IHHNHYKTVETYYAAINAISQSLSFSADELKTYL >gi|299857062|gb|ADWS01000002.1| GENE 250 247420 - 247527 85 35 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1773 NR:ns ## KEGG: ECS88_1773 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 35 38 72 72 68 100.0 5e-11 MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG >gi|299857062|gb|ADWS01000002.1| GENE 251 247580 - 248338 657 252 aa, chain - ## HITS:1 COG:ECs2428 KEGG:ns NR:ns ## COG: ECs2428 COG3137 # Protein_GI_number: 15831682 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative salt-induced outer membrane protein # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 461 100.0 1e-130 MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT DRRTTLSLGYSM >gi|299857062|gb|ADWS01000002.1| GENE 252 248625 - 249554 968 309 aa, chain + ## HITS:1 COG:ECs2429 KEGG:ns NR:ns ## COG: ECs2429 COG1105 # Protein_GI_number: 15831683 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 572 100.0 1e-163 MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFP AGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQ LEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQNQGIRCIIDSSGEALSAALAIGN IELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQ VVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDDT QKIYAYLSR >gi|299857062|gb|ADWS01000002.1| GENE 253 249655 - 249945 316 96 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_2442 NR:ns ## KEGG: ECH74115_2442 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 96 1 96 96 158 100.0 4e-38 MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEGNIHELGTNTFGLISTQ SEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK >gi|299857062|gb|ADWS01000002.1| GENE 254 250051 - 250911 782 286 aa, chain + ## HITS:1 COG:ECs2431 KEGG:ns NR:ns ## COG: ECs2431 COG3001 # Protein_GI_number: 15831685 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 575 100.0 1e-164 MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEAD QLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQP QFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRL ASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQ SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA >gi|299857062|gb|ADWS01000002.1| GENE 255 250952 - 251488 500 178 aa, chain - ## HITS:1 COG:no KEGG:SDY_1819 NR:ns ## KEGG: SDY_1819 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 178 1 178 178 337 100.0 8e-92 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQEGINAVMLDFTHVMIDM MQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI >gi|299857062|gb|ADWS01000002.1| GENE 256 251635 - 252303 752 222 aa, chain + ## HITS:1 COG:ECs2433 KEGG:ns NR:ns ## COG: ECs2433 COG0637 # Protein_GI_number: 15831687 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 410 100.0 1e-115 MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDL WYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLH MLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIA SKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDLLG >gi|299857062|gb|ADWS01000002.1| GENE 257 252466 - 253056 322 196 aa, chain + ## HITS:1 COG:ydjM KEGG:ns NR:ns ## COG: ydjM COG1988 # Protein_GI_number: 16129682 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 196 5 200 200 380 100.0 1e-106 MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKW ISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLT PAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVWMPHSLPENSAVRWSSQMIN TLQIQFHRLIKHQVEY >gi|299857062|gb|ADWS01000002.1| GENE 258 253189 - 254580 1701 463 aa, chain + ## HITS:1 COG:ydjN KEGG:ns NR:ns ## COG: ydjN COG1823 # Protein_GI_number: 16129683 # Func_class: R General function prediction only # Function: Predicted Na+/dicarboxylate symporter # Organism: Escherichia coli K12 # 1 462 1 462 463 750 99.0 0 MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKD SVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAA LIGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSDLSVPQLVLSFIPKNPFADLT GANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVL TFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAP TVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPL IDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR >gi|299857062|gb|ADWS01000002.1| GENE 259 254584 - 254871 121 95 aa, chain - ## HITS:1 COG:no KEGG:JW1719 NR:ns ## KEGG: JW1719 # Name: ydjO # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 95 177 271 271 190 98.0 2e-47 MLNINLLFNPLNLPGMGSGVLEDIMSIPDSSLRKRLGYEVLSFSLQAHSLSQECIDKLDI FFAGDLFKYESVCIAAMEHLKSKATAPIQNGPLPA >gi|299857062|gb|ADWS01000002.1| GENE 260 255031 - 255387 160 118 aa, chain - ## HITS:1 COG:no KEGG:SF1498 NR:ns ## KEGG: SF1498 # Name: ydjO # Def: hypothetical protein # Organism: S.flexneri # Pathway: not_defined # 1 118 5 122 246 223 98.0 2e-57 MFSTNLIQSNYGDLNIKTLAFDSFKERLESTMAALTFFISTGQCDCDEIAESNFNRMIAY MSNINYDASKPGAPALSFDTYLQDNVKYRVIINNLYGSEFRIRDINENFVGMDFTCEF >gi|299857062|gb|ADWS01000002.1| GENE 261 255676 - 255939 191 87 aa, chain - ## HITS:1 COG:no KEGG:SSON_1427 NR:ns ## KEGG: SSON_1427 # Name: not_defined # Def: cell division modulator # Organism: S.sonnei # Pathway: not_defined # 1 87 1 87 87 155 100.0 6e-37 MRLVKPVMKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESF LRSPAFTVPESAQRWANQIRQEGEVTE >gi|299857062|gb|ADWS01000002.1| GENE 262 256122 - 258383 2263 753 aa, chain + ## HITS:1 COG:katE KEGG:ns NR:ns ## COG: katE COG0753 # Protein_GI_number: 16129686 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Escherichia coli K12 # 1 753 1 753 753 1515 99.0 0 MSQHNEKNPHQHQSPLHDSSEAKPGMDSLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDT RNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGNRGPTLLEDFILREKITHFDHE RIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVR DIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFW DYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKA SLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLI PEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQI SRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRG GFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIR ERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKG RVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSL TVDAVIVPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKVADQGEEGIVE ADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA >gi|299857062|gb|ADWS01000002.1| GENE 263 258430 - 259188 579 252 aa, chain - ## HITS:1 COG:ECs2439 KEGG:ns NR:ns ## COG: ECs2439 COG3394 # Protein_GI_number: 15831693 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 508 97.0 1e-144 MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGM HFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQELASQYLRFIELFGRKPT HLDSHHHVHMFPQIFPIVARFAAEEGIALRIDRQPLSNAGDLPANLRSSQGFSSAFYGEE ISEALFLQVLDDASHRGDRSLEVMCHPAFIDNTIRQSAYCFPRLTELEVLTSASLKYAIA ERGYRLGSYLNV >gi|299857062|gb|ADWS01000002.1| GENE 264 259201 - 260553 1541 450 aa, chain - ## HITS:1 COG:ECs2440 KEGG:ns NR:ns ## COG: ECs2440 COG1486 # Protein_GI_number: 15831694 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 933 98.0 0 MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEDGKEKLDIIFELCQRMID NAGVPMKLYKTLDRREALKDADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLF KGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYRHTGFKRFIGVCNIPIGMKM FIRDVLMLKDSDDLSIDLFGLNHMVFIKDVLVNGKSRFAELLDGVASGQLKASSVKNIFD LPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNP ELKVKPKELEQRGGAYYSDAACEVINAIYNDKQAEHYVNIPHHGHIDNIPADWAVEMTCK LGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALSGEFNDVLLALNLSPLVHSDRD AELLAREMILAHEKWLPNFADCIAELKKAH >gi|299857062|gb|ADWS01000002.1| GENE 265 260658 - 261497 753 279 aa, chain - ## HITS:1 COG:ECs2441 KEGG:ns NR:ns ## COG: ECs2441 COG2207 # Protein_GI_number: 15831695 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 279 2 280 280 518 100.0 1e-147 MQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEING KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT NNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM HDKEQFSESALENMVTLSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ >gi|299857062|gb|ADWS01000002.1| GENE 266 261508 - 261858 582 116 aa, chain - ## HITS:1 COG:ECs2442 KEGG:ns NR:ns ## COG: ECs2442 COG1447 # Protein_GI_number: 15831696 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 116 1 116 116 173 100.0 9e-44 MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMA LNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARELITELIELHEKLKA >gi|299857062|gb|ADWS01000002.1| GENE 267 261909 - 263267 1603 452 aa, chain - ## HITS:1 COG:celB KEGG:ns NR:ns ## COG: celB COG1455 # Protein_GI_number: 16129691 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Escherichia coli K12 # 1 452 1 452 452 792 100.0 0 MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSF FYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLL SVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWVIKLPDSVP ASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQIIMDTISTPLASLGSVVGWAYVIF VPLLWFFGIHGALALTALDNGIMTPWALENIATYQQYGSVEAALAAGKTFHIWAKPMLDS FIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIP FVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGIAT LIYLPFVVVANKAQNAIDKEESEEDIANALKF >gi|299857062|gb|ADWS01000002.1| GENE 268 263352 - 263672 391 106 aa, chain - ## HITS:1 COG:ECs2444 KEGG:ns NR:ns ## COG: ECs2444 COG1440 # Protein_GI_number: 15831698 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Escherichia coli O157:H7 # 1 93 1 93 106 174 100.0 3e-44 MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQI AYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKKAAAN >gi|299857062|gb|ADWS01000002.1| GENE 269 263971 - 264309 435 112 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1315 NR:ns ## KEGG: ECIAI39_1315 # Name: osmE # Def: DNA-binding transcriptional activator OsmE # Organism: E.coli_IAI39 # Pathway: not_defined # 1 112 1 112 112 207 100.0 9e-53 MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRAQVAQIAGKPSSEVS MIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCAEYDTDPQAAK >gi|299857062|gb|ADWS01000002.1| GENE 270 264511 - 265338 935 275 aa, chain + ## HITS:1 COG:nadE KEGG:ns NR:ns ## COG: nadE COG0171 # Protein_GI_number: 16129694 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Escherichia coli K12 # 1 275 1 275 275 550 99.0 1e-156 MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLC QMAINELRLETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVNIKGAVLASEQ ALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTD INPLYRLNKRQGKQLLAALGCPEHLYKKAPTADLEDDRPSLPDEVALGVTYDNIDDYLEG KNVPEQVARTIENWYLKTEHKRRPPITVFDDFWKK >gi|299857062|gb|ADWS01000002.1| GENE 271 265568 - 266455 532 295 aa, chain + ## HITS:1 COG:ECs2447 KEGG:ns NR:ns ## COG: ECs2447 COG0322 # Protein_GI_number: 15831701 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 592 99.0 1e-169 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSR VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQSIADEQKLCYGLLGLEPLSRGRA CFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQ NWLWLGAVNSLEDATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRAS >gi|299857062|gb|ADWS01000002.1| GENE 272 266415 - 266990 312 191 aa, chain - ## HITS:1 COG:ydjR KEGG:ns NR:ns ## COG: ydjR COG3758 # Protein_GI_number: 16129696 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 191 22 212 212 399 99.0 1e-111 MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIVT LLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTAGQMSMDFNIMTRLDVCKAKVR IAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFDGRHTLRLLQPQGKLLFSEIN WLAGHSPDQVQ >gi|299857062|gb|ADWS01000002.1| GENE 273 267193 - 267678 651 161 aa, chain - ## HITS:1 COG:spy KEGG:ns NR:ns ## COG: spy COG3678 # Protein_GI_number: 16129697 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli K12 # 1 161 1 161 161 227 99.0 7e-60 MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHQDMMFKDLNLTDA QKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAKAEAQIAKMEEQRKANMLAHM ETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE >gi|299857062|gb|ADWS01000002.1| GENE 274 268008 - 268976 767 322 aa, chain - ## HITS:1 COG:ydjS KEGG:ns NR:ns ## COG: ydjS COG2988 # Protein_GI_number: 16129698 # Func_class: E Amino acid transport and metabolism # Function: Succinylglutamate desuccinylase # Organism: Escherichia coli K12 # 1 322 1 322 322 657 99.0 0 MDNFLALTLTDKKPVITEREINGVRWRWLGDGVLELTPLTPPQGALVISAGIHGNETAPV EMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDMNRMFGGRWQLFAESGETC RARELEQCLEDFYDLGKESVRWHLDLHTAIRGSLHPQFGVLPQRDIPWDEKFLTWLGAAG LEALVFHKEPGGTFTHFSARHFGALACTLELGKALPFGQNDLRQFAVTASAIAALLSGES VGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFMPFEKGTLLAQDGEERFTVTHDVEY VLFPNPLVALGLRAGLMLEKIS >gi|299857062|gb|ADWS01000002.1| GENE 275 268969 - 270312 1131 447 aa, chain - ## HITS:1 COG:astB KEGG:ns NR:ns ## COG: astB COG3724 # Protein_GI_number: 16129699 # Func_class: E Amino acid transport and metabolism # Function: Succinylarginine dihydrolase # Organism: Escherichia coli K12 # 1 447 1 447 447 881 99.0 0 MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRQAAKQGLLKMKALADAGFPQA VIPPHERPFIPVLRQLGFSGSDEQVLEKVARQAPHWLSSVSSASPMWVANAATIAPSADT LDGKVHLTVANLNNKFHRSLEAHVTESLLKAIFNDEEKFSVHSALPQVALLGDEGAANHN RLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREASEAVARLNQVNPQQVIFAQQNPD VIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLANLRARVNGFMAIEVPATQVSVSDAV STYLFNSQLLSRDDGSMMLVLPQECREHAGVWGYLNELLAADNPISELKVFDLRESMANG GGPACLRLRVVLTEEERRAVNPAVMMNDTLFNALNDWVDRYYRDRLTAADLADPQLLREG REALDVLSQLLNLGSVYPFQREGGGNG >gi|299857062|gb|ADWS01000002.1| GENE 276 270309 - 271787 1188 492 aa, chain - ## HITS:1 COG:ECs2452 KEGG:ns NR:ns ## COG: ECs2452 COG1012 # Protein_GI_number: 15831706 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 492 1 492 492 947 98.0 0 MTLWINGDWITGQGASRVKRNPVSGEVLWQGNDADAAQVGQACRAARAAFPRWARLSLAE RQVVVERFAGLLERNKGELTAIIARETGKPRWEAATEVTAMINKIAISIKAYHVRTGEQR SEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTIIFKPSELTPWSGEAV MRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKIL ALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQRCTCARRLLLKSGAQGDAFLARLVA VSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAWQQLEAMGGRTLLAPRLLQSETSLLTP GIIEMTGVAGVPDEEVFGPLLRVWRYDSFEEAILMANNTRFGLSCGLVSPEREKFDQLLL EARAGIVNWNKPLTGAASTAPFGGIGASGNHRPSAWYAADYCAWPMASLESDSLTLPATL NPGLDFSDEVVR >gi|299857062|gb|ADWS01000002.1| GENE 277 271784 - 272818 1066 344 aa, chain - ## HITS:1 COG:ECs2453 KEGG:ns NR:ns ## COG: ECs2453 COG3138 # Protein_GI_number: 15831707 # Func_class: E Amino acid transport and metabolism # Function: Arginine/ornithine N-succinyltransferase beta subunit # Organism: Escherichia coli O157:H7 # 1 344 1 344 344 726 99.0 0 MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAIKTWQGELPKSEQGYVF VLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSS ELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVVAEMRGVIDEHGYSPFWQSLG KRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLSQEAQDVIGQVHPQTAPARAVLE KEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVEVAEGQPAQGDFPACLVANENYHHF RVVLARTDPATERLILTAAQLDALKCHAGDRVRLVRLCAEEKTA >gi|299857062|gb|ADWS01000002.1| GENE 278 272815 - 274035 1305 406 aa, chain - ## HITS:1 COG:cstC KEGG:ns NR:ns ## COG: cstC COG4992 # Protein_GI_number: 16129702 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli K12 # 1 406 1 406 406 818 99.0 0 MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFACGIAVNALGHAHPEL REALNEQASKFWHTGNGYTNEPVLRLAKKLIGATFADRVFFCNSGAEANEAALKLARKFA HDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALI DDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMH YGVTPDLLTTAKALGGGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELIN TPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAK AGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSRGSS >gi|299857062|gb|ADWS01000002.1| GENE 279 274481 - 275287 823 268 aa, chain + ## HITS:1 COG:xthA KEGG:ns NR:ns ## COG: xthA COG0708 # Protein_GI_number: 16129703 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Escherichia coli K12 # 1 268 1 268 268 566 100.0 1e-161 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL PEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC CVETGIDYEIRSMEKPSDHAPVWATFRR >gi|299857062|gb|ADWS01000002.1| GENE 280 275454 - 276164 687 236 aa, chain + ## HITS:1 COG:ECs2456 KEGG:ns NR:ns ## COG: ECs2456 COG0398 # Protein_GI_number: 15831710 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 236 17 252 252 400 97.0 1e-112 MNAERNFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFIIATL FLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSSSFLLARWLGRDLLLKYVGHSHTFQA IEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLPGIVIYTVMA SDLANEGITLRFILQLCLAGLALFILVQLAKLYARHKHVDLSASRRSPLTHPKNEG >gi|299857062|gb|ADWS01000002.1| GENE 281 276169 - 276846 861 225 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_1439 NR:ns ## KEGG: EcSMS35_1439 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 225 1 225 225 435 98.0 1e-121 MSQHYSVSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTML VQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYATPKAFYEALKEAGGTPGENMTMDNKET THVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE >gi|299857062|gb|ADWS01000002.1| GENE 282 276864 - 277568 634 234 aa, chain + ## HITS:1 COG:ECs2458 KEGG:ns NR:ns ## COG: ECs2458 COG0398 # Protein_GI_number: 15831712 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 234 2 235 235 402 99.0 1e-112 MKIQSRKIWYYRITLIILLFAMLLAWALLPGVHEFINRSVAAFAAVDQQGIERFIQSYGA LAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVMG REVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGLTSIRFRSFFIAT GLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNA >gi|299857062|gb|ADWS01000002.1| GENE 283 277568 - 278116 446 182 aa, chain + ## HITS:1 COG:ECs2459 KEGG:ns NR:ns ## COG: ECs2459 COG2128 # Protein_GI_number: 15831713 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 353 98.0 1e-97 MGLPPLSKIPFILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDP VVRSLVSARIAQMCLCEFCVDITSMKVAERTGSTDKLLAVADWRQSPLFSDEERLALEYA EAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLSARFNSAMDIPAQGLCRIPEK RS >gi|299857062|gb|ADWS01000002.1| GENE 284 278126 - 279292 1035 388 aa, chain + ## HITS:1 COG:ynjB KEGG:ns NR:ns ## COG: ynjB COG4134 # Protein_GI_number: 16129708 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli K12 # 1 388 2 389 389 688 97.0 0 MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTH YAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAET LPNWRYVDTQLPVREDFSVPTEGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANP GTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKVAPDKATFARVTAPLWQYLDALHPYLWR KGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFNQGMIGNVHF VTIPANANASAAAKVVANFLLSPNAQLRKADPAVWGDPSVLDPQKLPDGQRETLQSRMPQ DLPPVLAEPHAGWVNALEQEWLHRYGTH >gi|299857062|gb|ADWS01000002.1| GENE 285 279310 - 280800 1333 496 aa, chain + ## HITS:1 COG:ynjC KEGG:ns NR:ns ## COG: ynjC COG4135 # Protein_GI_number: 16129709 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli K12 # 1 496 1 496 496 677 96.0 0 MVAVIYAPLIPAALTLISPALSLTHWQALFADPQLPQALLATLVSTTIAAVGALLIALLV IVALWPWPKWQRMCARLPWLLAIPHVAFATSALLLFADGGLLYDYFPYFTPLMDKLGIGL GLTLAVKESAFLLWILAAVLSEKRLLQQVIVLDSLGYSRWQCLNWLLLPSVAPSLAMAML AIVAWSLSVVDVAIILGPGNPPTLAVISWQWLTQGDADQQTKGALASLLLMLLLAAYVLL SYLLWRSWRRTIPRVDGIRKPATPLLPGTTLASFLPLTGVLCVVLLAILADQSTINSEAL INSLTMGLVATFIALLLLLLWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLNLDGS WTAVVWGHLLWVMPWMLFILQPAWQRIDSRLILIAQTLSWSRAKIFFYVKCPLMLRPTLI AFAVGFSVSIAQYMPTLWLGAGRFPTLTTEAVALSSGGSNGIFAAQALWQLLLPLIIFAL TALVAKWVGYVRQGLR >gi|299857062|gb|ADWS01000002.1| GENE 286 280800 - 281453 200 217 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 195 1 200 245 81 30 3e-14 MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLFSWMIGALAGQFSCTGE LWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALPSTLKGTARRNAVKDALDR AGLAETYHQDPATLSGGQRARVALLRALLAQPKALLLDEPFSRLDVALRDNFRQWVFSEV RELAIPVVQVTHDLQDVPADSSVLDMEQWSENYNKLR >gi|299857062|gb|ADWS01000002.1| GENE 287 281520 - 282827 1280 435 aa, chain + ## HITS:1 COG:ynjE KEGG:ns NR:ns ## COG: ynjE COG2897 # Protein_GI_number: 16129711 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 435 6 440 440 842 99.0 0 MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNG PSGHEPAALNLSASWLDKMSTEQLNAWIKQHNLKADAPVALYGNDKDVDAVKTRLQKAGF THISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKL YLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAGARVA QIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQAR GLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTM RSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDP KNPVATGERGPDSSK >gi|299857062|gb|ADWS01000002.1| GENE 288 282836 - 283456 466 206 aa, chain - ## HITS:1 COG:ynjF KEGG:ns NR:ns ## COG: ynjF COG0558 # Protein_GI_number: 16129712 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Escherichia coli K12 # 1 206 3 208 208 357 99.0 9e-99 MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILL NRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFI GTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWI FGALCWMTTFTRVWSGYLTLKSHQRQ >gi|299857062|gb|ADWS01000002.1| GENE 289 283543 - 283950 364 135 aa, chain + ## HITS:1 COG:ECs2465 KEGG:ns NR:ns ## COG: ECs2465 COG0494 # Protein_GI_number: 15831719 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 135 1 135 135 236 98.0 6e-63 MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVELDESQQQALVRELNEELGIE ATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALVWCSPEEALQYPLAPADIP LLEAFMALRAARAAD >gi|299857062|gb|ADWS01000002.1| GENE 290 283916 - 284188 91 90 aa, chain - ## HITS:1 COG:no KEGG:SSON_1396 NR:ns ## KEGG: SSON_1396 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 90 1 90 90 178 100.0 4e-44 MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQPCTQCCVYQDQNYSEGA VIKAEGILLQCQRDDKTLSTNPLLWRRVKP >gi|299857062|gb|ADWS01000002.1| GENE 291 284424 - 285767 1495 447 aa, chain + ## HITS:1 COG:ECs2467 KEGG:ns NR:ns ## COG: ECs2467 COG0334 # Protein_GI_number: 15831721 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 894 99.0 0 MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPKYRQMSLLERLVEPERV IQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALT TLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMA GMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGS GNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKASRDGRVADYAKEF GLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQ QAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARLHHIMLDIHHACVEHGGEG EQTNYVQGANIAGFVKVADAMLAQGVI >gi|299857062|gb|ADWS01000002.1| GENE 292 285884 - 286924 258 346 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_1823 NR:ns ## KEGG: ECIAI1_1823 # Name: ynjI # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 346 1 346 346 701 99.0 0 MKKVLLQNHPGSEKYSFNGWEIFNSNFERMIKENKAMLLCKWGGYLTCVVAVMFVFAAIT SNGLNERGLITAGCSFLYLLIMMGLIVRAGFKAKKEQLHYYQAKGIEPLSIEKLQALQLI APYRFYHKQWSETLEFWPRKPEPGKDTFQYHVLPFDSIDIISKRRESLEDQWGIEDSESY CALMEHFLSGDHGANTFKANMEEAPEQVIALLNKFAVFPSDYISDCANNRSGKSSAKLIW AAELSWMISISSTAFQNGTIEEELAWHYIMLASRKAHELFESEEDYQKNSLMGFLYWHIC CYRRKLTDAELEACYRYDKQFWEHYSKKCRWPIRNVPWGASSVKYS >gi|299857062|gb|ADWS01000002.1| GENE 293 287052 - 289013 1737 653 aa, chain - ## HITS:1 COG:topB KEGG:ns NR:ns ## COG: topB COG0550 # Protein_GI_number: 16129717 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Escherichia coli K12 # 1 653 1 653 653 1321 99.0 0 MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYAR WNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQ LAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAY TILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIW QPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIE AAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLP QPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVF RKCVIELDIAKGKFVAKARFLAEAGWRALLGSKERDEENDGTPLPVVAKGDELLCEKGEV VERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGF LTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLY QLIDQAKRTPVRQFRGIVAPGSGGSADKKKAAPRKRSAKKSPPADEAGSGAIA >gi|299857062|gb|ADWS01000002.1| GENE 294 289018 - 290061 1220 347 aa, chain - ## HITS:1 COG:ECs2470 KEGG:ns NR:ns ## COG: ECs2470 COG0709 # Protein_GI_number: 15831724 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Escherichia coli O157:H7 # 1 347 1 347 347 679 99.0 0 MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNG TSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIARE VTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKPL GIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEM CQGAGVQARVDYDAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQ TSGGLLLAVMPEAENEVKTTAAEFGIELTAIGELVPARGGRAMVEIR >gi|299857062|gb|ADWS01000002.1| GENE 295 290178 - 290729 604 183 aa, chain - ## HITS:1 COG:ECs2471 KEGG:ns NR:ns ## COG: ECs2471 COG0778 # Protein_GI_number: 15831725 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 363 100.0 1e-101 MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGRERFSA VLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKVPRWEQEMSAGCAVMAMQM AAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYLGTPQLKASTSINVPDPTPFV TYF >gi|299857062|gb|ADWS01000002.1| GENE 296 290783 - 290947 85 54 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_2054 NR:ns ## KEGG: ECUMN_2054 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 54 1 54 54 103 100.0 3e-21 MLQHSPQFLLTSAGWVITITTSIAPVTGVTLSWENTCEPFGDLLPDFLNGRGVC >gi|299857062|gb|ADWS01000002.1| GENE 297 290890 - 292746 1881 618 aa, chain + ## HITS:1 COG:sppA KEGG:ns NR:ns ## COG: sppA COG0616 # Protein_GI_number: 16129720 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli K12 # 1 618 1 618 618 1205 99.0 0 MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQVSGGDSKETASRGALL LDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDL KNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLH GFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYL NTVAANRQIPAQQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKEFG WSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDAR LDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANY IVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQQMMQLS IENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELA KVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLASVASTVKSESDKLAA FNDPQNRYAFCLTCANVR >gi|299857062|gb|ADWS01000002.1| GENE 298 292913 - 293929 1011 338 aa, chain + ## HITS:1 COG:ECs2474 KEGG:ns NR:ns ## COG: ECs2474 COG0252 # Protein_GI_number: 15831728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 680 100.0 0 MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDS SDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIP LAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNRTTKAHADGFDAFASPNLPPL LEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILR SYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADM TVEATLTKLHYLLSQELDTETIRKAMSQNLRGELTPDD >gi|299857062|gb|ADWS01000002.1| GENE 299 293940 - 294581 574 213 aa, chain + ## HITS:1 COG:ECs2475 KEGG:ns NR:ns ## COG: ECs2475 COG1335 # Protein_GI_number: 15831729 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 213 7 219 219 439 99.0 1e-123 MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRGEAVIASQDWHPANHGS FASQHCVEPYMPGQLDGLPQTFWPDHCVQNSEGAQLHPLLNQKAIAAVFHKGENPLVDSY SAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFTVLDALQLGYKVNVITDGCRG VNIQPQDSAHAFMEMSAAGATLYTLADWEETQG >gi|299857062|gb|ADWS01000002.1| GENE 300 294742 - 295014 306 90 aa, chain - ## HITS:1 COG:ECs2486 KEGG:ns NR:ns ## COG: ECs2486 COG3139 # Protein_GI_number: 15831740 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 90 16 105 105 168 98.0 2e-42 MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNTEAQHMT IDTNGQMVMKSKQQLKEDFGISAKPIAMFK >gi|299857062|gb|ADWS01000002.1| GENE 301 295056 - 295469 237 137 aa, chain - ## HITS:1 COG:ECs2487 KEGG:ns NR:ns ## COG: ECs2487 COG0229 # Protein_GI_number: 15831741 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 285 100.0 2e-77 MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKY DSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDGPQPTGERYCVN SASLRFTDGENGEEING >gi|299857062|gb|ADWS01000002.1| GENE 302 295811 - 296806 1086 331 aa, chain + ## HITS:1 COG:ECs2488 KEGG:ns NR:ns ## COG: ECs2488 COG0057 # Protein_GI_number: 15831742 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 635 100.0 0 MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEV KDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMT GPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATT ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV VDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA LNDNFVKLVSWYDNETGYSNKVLDLIAHISK >gi|299857062|gb|ADWS01000002.1| GENE 303 296890 - 297774 952 294 aa, chain + ## HITS:1 COG:yeaD KEGG:ns NR:ns ## COG: yeaD COG0676 # Protein_GI_number: 16129734 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzymes related to aldose 1-epimerase # Organism: Escherichia coli K12 # 1 294 8 301 301 609 98.0 1e-174 MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQGAHLLSWKPAGEEEVLW LSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHREDADGVALTFE LTQSEETKKFWPHDFTLLAHFRVGKTCEIDLESHGEFETTSALHTYFNVGDIAKVSVSGL GDCFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGHQHHLNVV GWNPGPALSVSMGDMPDDGYKTFVCVETAYASETQKVTKEKPAHLAQSIRVAKR >gi|299857062|gb|ADWS01000002.1| GENE 304 297825 - 298679 808 284 aa, chain - ## HITS:1 COG:yeaE KEGG:ns NR:ns ## COG: yeaE COG0656 # Protein_GI_number: 16129735 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli K12 # 1 284 1 284 284 540 98.0 1e-153 MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGA EKVVGEALTGLRDNVFLVSKVYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAF EETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYHLGSRGIESDLL PWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHAHNISAAQVLLAWVISHQGVMAI PKAATIAHVQQNAAVLEVELSSAELTMLDKAYPAPKGKTALDMV >gi|299857062|gb|ADWS01000002.1| GENE 305 298769 - 299515 880 248 aa, chain - ## HITS:1 COG:yeaF KEGG:ns NR:ns ## COG: yeaF COG3713 # Protein_GI_number: 16129736 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Escherichia coli K12 # 1 248 1 248 248 467 100.0 1e-132 MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFW FRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQ YGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKE SARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLI STGITYKF >gi|299857062|gb|ADWS01000002.1| GENE 306 299951 - 301885 2051 644 aa, chain + ## HITS:1 COG:ECs2492 KEGG:ns NR:ns ## COG: ECs2492 COG2766 # Protein_GI_number: 15831746 # Func_class: T Signal transduction mechanisms # Function: Putative Ser protein kinase # Organism: Escherichia coli O157:H7 # 1 644 1 644 644 1293 100.0 0 MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRL SRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLA ERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWA AKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQN DPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIIL AHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGT LETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLS TRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYA EFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKI EKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVIS FNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS >gi|299857062|gb|ADWS01000002.1| GENE 307 301998 - 303281 947 427 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 [Phaeobacter gallaeciensis BS107] # 1 418 1 433 445 369 44 1e-101 MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAINKRSVTDVDSGESVSIPTEDIS EPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQGQASQDGEGQDEFVFQIS KDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGVPANISVVRSLQNSLARRTAM TAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAELRAKIERVPFIDTFDLRYKNYE KRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKE VDEHEFFYSQETGGTIVSSALKLMDEVVKERYNPAQWNIYAAQASDGDNWADDSPLCHEI LAKKLLPVVRYYSYIEITRRAHQTLWREYEHLQSTFDNFAMQHIRDQDDIYPVFRELFHK QNATAKD >gi|299857062|gb|ADWS01000002.1| GENE 308 303560 - 304903 800 447 aa, chain + ## HITS:1 COG:yeaI_2 KEGG:ns NR:ns ## COG: yeaI_2 COG2199 # Protein_GI_number: 16129739 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 267 447 1 181 181 356 100.0 6e-98 MVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVI FLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYI FRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLY VVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLL LTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFN SVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARL EGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNI SLVMTEADKALREAKSEGGNKVIIHHI >gi|299857062|gb|ADWS01000002.1| GENE 309 305102 - 305708 471 202 aa, chain + ## HITS:1 COG:no KEGG:APECO1_854 NR:ns ## KEGG: APECO1_854 # Name: yeaJ # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 202 67 268 556 410 99.0 1e-113 MLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMR ALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAAL LPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQS GSIGIDRKDIEKVFTGRTVLSS Prediction of potential genes in microbial genomes Time: Sun May 15 21:44:04 2011 Seq name: gi|299857061|gb|ADWS01000003.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont2.1, whole genome shotgun sequence Length of sequence - 282096 bp Number of predicted genes - 268, with homology - 267 Number of transcription units - 144, operones - 66 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 145 80 ## EcHS_A1120 IS621, transposase + Term 290 - 328 2.1 - Term 157 - 187 3.0 2 2 Op 1 4/0.468 - CDS 267 - 515 371 ## COG0298 Hydrogenase maturation factor 3 2 Op 2 . - CDS 528 - 869 283 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 4 2 Op 3 . - CDS 862 - 1350 528 ## SSON_3137 hydrogenase 2-specific chaperone 5 2 Op 4 5/0.258 - CDS 1343 - 1837 616 ## COG0680 Ni,Fe-hydrogenase maturation factor 6 2 Op 5 4/0.468 - CDS 1837 - 3540 1911 ## COG0374 Ni,Fe-hydrogenase I large subunit 7 2 Op 6 6/0.145 - CDS 3537 - 4715 1552 ## COG5557 Polysulphide reductase 8 2 Op 7 4/0.468 - CDS 4705 - 5691 1021 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 9 2 Op 8 . - CDS 5694 - 6812 1120 ## COG1740 Ni,Fe-hydrogenase I small subunit - Prom 6914 - 6973 3.5 10 3 Tu 1 . - CDS 7001 - 7288 275 ## ECIAI1_3148 hypothetical protein - Prom 7321 - 7380 2.5 11 4 Tu 1 . - CDS 7407 - 8294 943 ## COG0412 Dienelactone hydrolase and related enzymes - Prom 8409 - 8468 1.8 + Prom 8251 - 8310 3.3 12 5 Tu 1 . + CDS 8451 - 9491 1020 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Term 9491 - 9523 5.3 13 6 Tu 1 . - CDS 9531 - 10025 641 ## COG2862 Predicted membrane protein - Prom 10050 - 10109 3.2 + Prom 9997 - 10056 4.1 14 7 Tu 1 . + CDS 10216 - 11100 988 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 11106 - 11146 8.0 - Term 11092 - 11134 8.5 15 8 Op 1 30/0.000 - CDS 11372 - 11797 554 ## COG0848 Biopolymer transport protein 16 8 Op 2 . - CDS 11804 - 12523 862 ## COG0811 Biopolymer transport proteins - Prom 12744 - 12803 2.7 + Prom 12579 - 12638 5.0 17 9 Tu 1 . + CDS 12790 - 13977 1094 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases + Term 13998 - 14041 -0.4 + Prom 14024 - 14083 4.1 18 10 Tu 1 . + CDS 14117 - 14776 570 ## COG0586 Uncharacterized membrane-associated protein + Term 14787 - 14826 6.0 19 11 Tu 1 . - CDS 14816 - 15715 852 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 15687 - 15746 5.3 20 12 Tu 1 . + CDS 15909 - 17072 1552 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family + Term 17133 - 17168 7.4 21 13 Tu 1 . + CDS 17177 - 18004 876 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 18018 - 18056 7.2 + Prom 18041 - 18100 2.9 22 14 Op 1 . + CDS 18204 - 19130 627 ## EC55989_3430 hypothetical protein 23 14 Op 2 . + CDS 19181 - 19438 302 ## COG4238 Murein lipoprotein + Term 19447 - 19486 9.2 - Term 19434 - 19474 5.1 24 15 Tu 1 . - CDS 19481 - 21700 2216 ## COG1032 Fe-S oxidoreductase - Prom 21729 - 21788 6.3 - Term 21763 - 21810 9.1 25 16 Op 1 7/0.129 - CDS 21811 - 23223 1202 ## COG2132 Putative multicopper oxidases - Term 23245 - 23279 2.8 26 16 Op 2 5/0.258 - CDS 23298 - 24035 614 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 24114 - 24173 2.3 - Term 24095 - 24123 -0.9 27 17 Tu 1 . - CDS 24269 - 26527 2499 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 26576 - 26635 2.4 28 18 Tu 1 . - CDS 26665 - 26754 76 ## - Prom 26977 - 27036 4.8 - Term 26975 - 27032 4.3 29 19 Op 1 3/0.790 - CDS 27073 - 27555 454 ## COG3449 DNA gyrase inhibitor 30 19 Op 2 . - CDS 27608 - 28000 525 ## COG3111 Uncharacterized conserved protein - Prom 28072 - 28131 8.5 + Prom 28029 - 28088 4.6 31 20 Op 1 40/0.000 + CDS 28152 - 28811 812 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 32 20 Op 2 . + CDS 28808 - 30157 1148 ## COG0642 Signal transduction histidine kinase + Term 30166 - 30209 7.2 33 21 Tu 1 . - CDS 30203 - 30433 59 ## ECO103_3705 hypothetical protein - Prom 30560 - 30619 6.3 34 22 Op 1 1/0.952 + CDS 30854 - 31222 387 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 35 22 Op 2 4/0.468 + CDS 31210 - 31434 276 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 36 22 Op 3 . + CDS 31465 - 31779 399 ## COG1359 Uncharacterized conserved protein + Term 31791 - 31827 4.2 37 23 Op 1 7/0.129 - CDS 31827 - 33719 1966 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 38 23 Op 2 7/0.129 - CDS 33748 - 34329 501 ## COG3150 Predicted esterase 39 23 Op 3 7/0.129 - CDS 34329 - 35156 746 ## COG1409 Predicted phosphohydrolases 40 23 Op 4 8/0.113 - CDS 35181 - 35603 151 ## COG3151 Uncharacterized protein conserved in bacteria 41 23 Op 5 . - CDS 35604 - 36233 560 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 36383 - 36442 4.7 + Prom 36264 - 36323 6.6 42 24 Tu 1 . + CDS 36438 - 37919 1637 ## COG1538 Outer membrane protein + Prom 37980 - 38039 2.5 43 25 Op 1 5/0.258 + CDS 38067 - 38738 434 ## COG5463 Predicted integral membrane protein 44 25 Op 2 . + CDS 38744 - 39904 1168 ## COG0754 Glutathionylspermidine synthase + Term 39912 - 39951 8.2 - Term 39897 - 39937 0.3 45 26 Tu 1 . - CDS 39942 - 40730 765 ## COG3384 Uncharacterized conserved protein - Prom 40821 - 40880 5.5 + Prom 40717 - 40776 3.5 46 27 Tu 1 . + CDS 40873 - 41646 926 ## COG0428 Predicted divalent heavy-metal cations transporter + Term 41756 - 41787 -0.8 - Term 41644 - 41686 10.4 47 28 Tu 1 . - CDS 41704 - 41874 235 ## ECUMN_3528 hypothetical protein - Prom 41966 - 42025 5.0 - Term 42063 - 42104 5.6 48 29 Tu 1 . - CDS 42135 - 42788 775 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase + Prom 43075 - 43134 3.7 49 30 Tu 1 . + CDS 43162 - 43452 330 ## COG2960 Uncharacterized protein conserved in bacteria + Term 43468 - 43519 9.1 + Prom 43574 - 43633 8.8 50 31 Op 1 6/0.145 + CDS 43735 - 44286 526 ## COG3539 P pilus assembly protein, pilin FimA 51 31 Op 2 10/0.113 + CDS 44346 - 46850 1091 ## COG3188 P pilus assembly protein, porin PapC 52 31 Op 3 . + CDS 46866 - 47615 431 ## COG3121 P pilus assembly protein, chaperone PapD 53 31 Op 4 . + CDS 47617 - 48681 329 ## SSON_3184 hypothetical protein + Term 48703 - 48730 1.5 - Term 48685 - 48723 3.5 54 32 Tu 1 . - CDS 48724 - 48924 226 ## SSON_3186 glycogen synthesis protein GlgS - Prom 49018 - 49077 6.9 + Prom 49009 - 49068 5.8 55 33 Op 1 . + CDS 49193 - 49822 208 ## ECO103_3727 putative inner membrane protein 56 33 Op 2 . + CDS 49849 - 51510 1748 ## COG2268 Uncharacterized protein conserved in bacteria + Term 51527 - 51563 3.0 - Term 52074 - 52105 3.2 57 34 Op 1 5/0.258 - CDS 52304 - 53737 1890 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 58 34 Op 2 5/0.258 - CDS 53785 - 56625 2771 ## COG1391 Glutamine synthetase adenylyltransferase 59 34 Op 3 . - CDS 56648 - 57949 1433 ## COG3025 Uncharacterized conserved protein - Prom 58021 - 58080 2.6 + Prom 58105 - 58164 2.2 60 35 Op 1 7/0.129 + CDS 58191 - 58811 626 ## COG3103 SH3 domain protein 61 35 Op 2 . + CDS 58875 - 60113 1048 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Term 60194 - 60245 2.8 62 36 Op 1 4/0.468 - CDS 60276 - 61097 1015 ## COG1968 Uncharacterized bacitracin resistance protein 63 36 Op 2 . - CDS 61187 - 61555 445 ## COG1539 Dihydroneopterin aldolase + Prom 61497 - 61556 1.8 64 37 Tu 1 . + CDS 61660 - 62277 536 ## COG0344 Predicted membrane protein 65 38 Tu 1 . - CDS 62290 - 63222 860 ## COG0583 Transcriptional regulator - Prom 63348 - 63407 3.9 + Prom 63289 - 63348 3.5 66 39 Op 1 11/0.048 + CDS 63432 - 64340 249 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 67 39 Op 2 3/0.790 + CDS 64313 - 64942 248 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase + Term 64950 - 64982 1.5 68 39 Op 3 . + CDS 64991 - 66454 1466 ## COG0471 Di- and tricarboxylate transporters + Term 66462 - 66504 4.0 - Term 66447 - 66489 2.8 69 40 Tu 1 . - CDS 66497 - 67510 656 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase - Prom 67534 - 67593 4.0 + Prom 67553 - 67612 6.3 70 41 Tu 1 . + CDS 67748 - 67963 357 ## PROTEIN SUPPORTED gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 + Term 68010 - 68050 6.1 + Prom 67992 - 68051 3.0 71 42 Op 1 31/0.000 + CDS 68074 - 69819 1420 ## COG0358 DNA primase (bacterial type) 72 42 Op 2 . + CDS 70014 - 71855 2423 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 71911 - 71943 3.0 - Term 71899 - 71929 2.6 73 43 Tu 1 . - CDS 71934 - 72440 382 ## COG3663 G:T/U mismatch-specific DNA glycosylase - Prom 72582 - 72641 79.6 + TRNA 72565 - 72640 93.9 # Met CAT 0 0 - Term 72640 - 72673 5.4 74 44 Tu 1 . - CDS 72694 - 73458 726 ## COG2375 Siderophore-interacting protein - Prom 73502 - 73561 6.2 + Prom 73448 - 73507 6.7 75 45 Tu 1 . + CDS 73735 - 74358 722 ## COG1695 Predicted transcriptional regulators + Term 74447 - 74490 3.2 76 46 Tu 1 . - CDS 74512 - 76032 1508 ## COG0840 Methyl-accepting chemotaxis protein 77 47 Tu 1 . + CDS 76540 - 77829 1335 ## COG4992 Ornithine/acetylornithine aminotransferase + Term 77837 - 77878 9.1 - Term 77825 - 77865 8.1 78 48 Tu 1 . - CDS 77871 - 78203 465 ## COG0073 EMAP domain - Prom 78224 - 78283 3.1 + Prom 78174 - 78233 4.8 79 49 Tu 1 . + CDS 78422 - 79405 970 ## COG1609 Transcriptional regulators + Term 79415 - 79464 12.3 + Prom 79410 - 79469 3.9 80 50 Op 1 . + CDS 79589 - 82681 3214 ## COG3250 Beta-galactosidase/beta-glucuronidase 81 50 Op 2 3/0.790 + CDS 82678 - 83127 370 ## COG2731 Beta-galactosidase, beta subunit 82 50 Op 3 . + CDS 83190 - 84623 1474 ## COG0531 Amino acid transporters + Term 84643 - 84703 9.3 + Prom 84660 - 84719 6.7 83 51 Op 1 . + CDS 84757 - 85827 1035 ## EC55989_3493 hypothetical protein 84 51 Op 2 . + CDS 85844 - 88195 2667 ## EC55989_3494 putative glycosyl hydrolase + Prom 88421 - 88480 7.2 85 52 Tu 1 . + CDS 88521 - 90539 1762 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 90549 - 90595 5.6 86 53 Tu 1 . - CDS 90584 - 91000 317 ## COG5499 Predicted transcription regulator containing HTH domain - Prom 91064 - 91123 3.5 87 54 Tu 1 . - CDS 91271 - 92407 447 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative - Prom 92452 - 92511 4.6 + Prom 92377 - 92436 2.0 88 55 Op 1 3/0.790 + CDS 92492 - 92995 484 ## COG1451 Predicted metal-dependent hydrolase 89 55 Op 2 3/0.790 + CDS 93072 - 93755 522 ## COG2949 Uncharacterized membrane protein 90 55 Op 3 3/0.790 + CDS 93816 - 94820 807 ## COG0673 Predicted dehydrogenases and related proteins + Term 94846 - 94898 6.6 + Prom 94835 - 94894 6.7 91 56 Tu 1 . + CDS 95103 - 96068 1218 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 96116 - 96169 1.2 + Prom 96285 - 96344 6.0 92 57 Tu 1 . + CDS 96468 - 97712 1398 ## COG3633 Na+/serine symporter + Term 97721 - 97757 6.2 93 58 Tu 1 . - CDS 97717 - 98268 249 ## SSON_3243 hypothetical protein - Term 98288 - 98324 6.4 94 59 Op 1 3/0.790 - CDS 98351 - 99838 1607 ## COG2721 Altronate dehydratase 95 59 Op 2 . - CDS 99853 - 101265 1747 ## COG1904 Glucuronate isomerase - Prom 101372 - 101431 3.1 + Prom 101451 - 101510 3.0 96 60 Tu 1 . + CDS 101748 - 103046 1701 ## COG0477 Permeases of the major facilitator superfamily + Term 103066 - 103109 8.2 97 61 Op 1 . - CDS 103134 - 104222 521 ## ECO103_3839 putative minor pilin and initiator protein 98 61 Op 2 . - CDS 104219 - 106921 1644 ## EC55989_3509 conserved hypothetical protein; putative exported protein - Term 106935 - 106965 3.0 99 62 Op 1 . - CDS 106995 - 107495 628 ## ECO103_3841 putative fimbrial subunit 100 62 Op 2 . - CDS 107525 - 108163 385 ## EC55989_3511 putative fimbrial protein - Prom 108411 - 108470 7.0 + Prom 108285 - 108344 4.8 101 63 Tu 1 . + CDS 108537 - 109313 947 ## COG2186 Transcriptional regulators + Term 109325 - 109360 4.1 + Prom 109430 - 109489 6.0 102 64 Op 1 . + CDS 109658 - 110320 514 ## COG0586 Uncharacterized membrane-associated protein 103 64 Op 2 . + CDS 110339 - 110707 263 ## JW3067 conserved hypothetical protein + Term 110771 - 110809 6.4 + Prom 110714 - 110773 4.1 104 65 Op 1 . + CDS 110839 - 111222 481 ## SSON_3256 hypothetical protein 105 65 Op 2 7/0.129 + CDS 111260 - 111565 461 ## COG4575 Uncharacterized conserved protein 106 65 Op 3 . + CDS 111568 - 111972 431 ## COG5393 Predicted membrane protein 107 65 Op 4 . + CDS 111962 - 112261 377 ## ECSP_4074 hypothetical protein + Term 112271 - 112301 3.4 + Prom 112293 - 112352 4.4 108 66 Op 1 3/0.790 + CDS 112447 - 112839 455 ## COG2259 Predicted membrane protein + Term 112867 - 112896 2.1 109 66 Op 2 4/0.468 + CDS 112909 - 113895 1064 ## COG0435 Predicted glutathione S-transferase + Term 114022 - 114058 2.4 + Prom 114088 - 114147 5.2 110 67 Tu 1 6/0.145 + CDS 114188 - 114553 326 ## COG3152 Predicted membrane protein + Term 114567 - 114601 3.5 + Prom 114587 - 114646 6.4 111 68 Tu 1 . + CDS 114795 - 115151 400 ## COG3152 Predicted membrane protein + Term 115162 - 115192 3.0 - Term 115148 - 115179 3.2 112 69 Tu 1 . - CDS 115202 - 116098 973 ## COG0583 Transcriptional regulator + Prom 116086 - 116145 1.7 113 70 Op 1 . + CDS 116203 - 116904 609 ## COG1741 Pirin-related protein 114 70 Op 2 . + CDS 116927 - 117091 205 ## G2583_3831 hypothetical protein - Term 117152 - 117209 3.2 115 71 Op 1 3/0.790 - CDS 117303 - 118613 1216 ## COG3681 Uncharacterized conserved protein 116 71 Op 2 10/0.113 - CDS 118641 - 119972 1290 ## COG0814 Amino acid permeases - Prom 120158 - 120217 4.8 - Term 120193 - 120222 2.1 117 72 Op 1 1/0.952 - CDS 120247 - 121611 1151 ## COG1760 L-serine deaminase 118 72 Op 2 1/0.952 - CDS 121683 - 122072 438 ## COG0251 Putative translation initiation inhibitor, yjgF family 119 72 Op 3 3/0.790 - CDS 122086 - 124380 2622 ## COG1882 Pyruvate-formate lyase 120 72 Op 4 3/0.790 - CDS 124414 - 125622 1075 ## COG0282 Acetate kinase 121 72 Op 5 4/0.468 - CDS 125648 - 126979 1394 ## COG0814 Amino acid permeases 122 72 Op 6 4/0.468 - CDS 127001 - 127990 907 ## COG1171 Threonine dehydratase - Prom 128021 - 128080 4.9 123 73 Tu 1 . - CDS 128089 - 129027 653 ## COG0583 Transcriptional regulator - Prom 129055 - 129114 3.3 + Prom 129721 - 129780 3.0 124 74 Op 1 . + CDS 129816 - 130355 59 ## EcSMS35_3417 hypothetical protein 125 74 Op 2 . + CDS 130377 - 131564 201 ## ECO103_3868 hypothetical protein 126 75 Op 1 1/0.952 - CDS 132368 - 133513 1044 ## COG1929 Glycerate kinase 127 75 Op 2 1/0.952 - CDS 133610 - 134500 1188 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 128 75 Op 3 6/0.145 - CDS 134530 - 135300 852 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 129 75 Op 4 . - CDS 135316 - 136650 1583 ## COG0477 Permeases of the major facilitator superfamily - Prom 136742 - 136801 6.5 + Prom 136765 - 136824 6.9 130 76 Tu 1 . + CDS 137025 - 138596 1331 ## COG2721 Altronate dehydratase + Term 138617 - 138657 2.5 + Prom 138657 - 138716 7.6 131 77 Op 1 . + CDS 138745 - 139080 291 ## COG2002 Regulators of stationary/sporulation gene expression 132 77 Op 2 . + CDS 139242 - 139544 193 ## EcolC_0570 hypothetical protein + Term 139680 - 139722 2.1 - Term 139476 - 139539 2.1 133 78 Tu 1 . - CDS 139599 - 140408 743 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 140569 - 140628 6.0 + Prom 140514 - 140573 6.0 134 79 Op 1 1/0.952 + CDS 140657 - 141937 1267 ## COG4573 Predicted tagatose 6-phosphate kinase 135 79 Op 2 13/0.016 + CDS 141960 - 142433 557 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 136 79 Op 3 13/0.016 + CDS 142444 - 143223 1109 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 137 79 Op 4 4/0.468 + CDS 143213 - 144091 981 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 138 79 Op 5 3/0.790 + CDS 144109 - 144543 600 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 139 79 Op 6 9/0.113 + CDS 144540 - 145673 1027 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase + Term 145692 - 145727 -0.0 + Prom 145876 - 145935 6.1 140 80 Op 1 3/0.790 + CDS 146024 - 147178 961 ## COG2222 Predicted phosphosugar isomerases 141 80 Op 2 3/0.790 + CDS 147191 - 148051 860 ## COG0191 Fructose/tagatose bisphosphate aldolase + Prom 148138 - 148197 4.9 142 81 Op 1 13/0.016 + CDS 148217 - 148693 573 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 143 81 Op 2 13/0.016 + CDS 148732 - 149535 825 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 144 81 Op 3 2/0.903 + CDS 149525 - 150316 812 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 150324 - 150360 7.1 145 81 Op 4 2/0.903 + CDS 150371 - 151072 619 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 151150 - 151201 7.3 + Prom 151280 - 151339 9.4 146 82 Op 1 7/0.129 + CDS 151472 - 152056 498 ## COG3539 P pilus assembly protein, pilin FimA + Term 152065 - 152104 9.3 147 82 Op 2 10/0.113 + CDS 152136 - 152831 262 ## COG3121 P pilus assembly protein, chaperone PapD 148 82 Op 3 . + CDS 152861 - 153184 112 ## COG3188 P pilus assembly protein, porin PapC 149 82 Op 4 6/0.145 + CDS 153211 - 155376 1465 ## COG3188 P pilus assembly protein, porin PapC 150 82 Op 5 . + CDS 155387 - 156478 442 ## COG3539 P pilus assembly protein, pilin FimA - Term 156469 - 156513 8.1 151 83 Tu 1 . - CDS 156521 - 157381 1036 ## COG0313 Predicted methyltransferases - Prom 157437 - 157496 5.6 + Prom 157199 - 157258 2.7 152 84 Op 1 10/0.113 + CDS 157445 - 159481 1889 ## COG3107 Putative lipoprotein 153 84 Op 2 11/0.048 + CDS 159439 - 159834 231 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 154 84 Op 3 11/0.048 + CDS 159854 - 160444 470 ## COG0279 Phosphoheptose isomerase 155 84 Op 4 . + CDS 160454 - 161029 568 ## COG2823 Predicted periplasmic or secreted lipoprotein + Term 161100 - 161139 -0.3 - Term 161080 - 161127 -0.1 156 85 Op 1 2/0.903 - CDS 161143 - 162183 1251 ## COG0701 Predicted permeases - Term 162190 - 162242 3.2 157 85 Op 2 . - CDS 162256 - 162891 531 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases - Prom 163061 - 163120 2.1 158 86 Tu 1 . + CDS 163019 - 163537 597 ## COG0693 Putative intracellular protease/amidase + Term 163775 - 163821 1.1 - Term 163451 - 163479 1.4 159 87 Tu 1 . - CDS 163517 - 163960 376 ## COG3787 Uncharacterized protein conserved in bacteria - Prom 163982 - 164041 3.1 + Prom 163927 - 163986 4.2 160 88 Tu 1 . + CDS 164011 - 164313 255 ## COG2827 Predicted endonuclease containing a URI domain - Term 164206 - 164248 1.1 161 89 Op 1 6/0.145 - CDS 164300 - 164803 673 ## COG3153 Predicted acetyltransferase 162 89 Op 2 . - CDS 164797 - 165321 729 ## COG3154 Putative lipid carrier protein - Prom 165362 - 165421 4.4 + Prom 165441 - 165500 4.4 163 90 Op 1 13/0.016 + CDS 165530 - 166525 834 ## COG0826 Collagenase and related proteases 164 90 Op 2 2/0.903 + CDS 166534 - 167412 940 ## COG0826 Collagenase and related proteases + Prom 167527 - 167586 5.7 165 91 Tu 1 . + CDS 167618 - 168625 926 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases + Term 168679 - 168714 0.2 166 92 Tu 1 . - CDS 168743 - 169987 1491 ## COG0814 Amino acid permeases - Prom 170074 - 170133 5.7 - Term 170063 - 170097 3.5 167 93 Tu 1 . - CDS 170141 - 172030 2534 ## COG0513 Superfamily II DNA and RNA helicases - Prom 172056 - 172115 5.7 - Term 172138 - 172174 1.3 168 94 Tu 1 . - CDS 172210 - 173094 693 ## COG4785 Lipoprotein NlpI, contains TPR repeats - Term 173158 - 173191 5.9 169 95 Op 1 26/0.000 - CDS 173203 - 175338 188 ## PROTEIN SUPPORTED gi|229537485|ref|ZP_04426621.1| ribosomal protein S1 - Term 175535 - 175563 1.3 170 95 Op 2 14/0.016 - CDS 175585 - 175854 445 ## PROTEIN SUPPORTED gi|16131057|ref|NP_417634.1| 30S ribosomal subunit protein S15 - Prom 175931 - 175990 4.1 - Term 175872 - 175910 -0.8 171 96 Op 1 26/0.000 - CDS 176003 - 176947 1070 ## COG0130 Pseudouridine synthase 172 96 Op 2 32/0.000 - CDS 176947 - 177348 648 ## COG0858 Ribosome-binding factor A - Prom 177385 - 177444 2.3 - Term 177426 - 177484 1.2 173 96 Op 3 20/0.000 - CDS 177512 - 180184 3310 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 174 96 Op 4 32/0.000 - CDS 180209 - 181696 1026 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 175 96 Op 5 . - CDS 181724 - 182146 353 ## COG0779 Uncharacterized protein conserved in bacteria - TRNA 182383 - 182459 86.1 # Met CAT 0 0 + Prom 182618 - 182677 4.4 176 97 Tu 1 . + CDS 182807 - 184150 1636 ## COG0137 Argininosuccinate synthase + Term 184158 - 184199 5.7 177 98 Tu 1 . - CDS 184158 - 185783 586 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 185825 - 185884 7.1 - TRNA 186242 - 186328 70.3 # Leu GAG 0 0 - Term 186192 - 186234 9.2 178 99 Tu 1 . - CDS 186343 - 186675 380 ## COG1314 Preprotein translocase subunit SecG - Prom 186803 - 186862 4.0 - Term 186852 - 186879 -0.1 179 100 Op 1 9/0.113 - CDS 186903 - 188240 1524 ## COG1109 Phosphomannomutase 180 100 Op 2 7/0.129 - CDS 188233 - 189081 849 ## COG0294 Dihydropteroate synthase and related enzymes - Term 189099 - 189140 9.5 181 101 Op 1 13/0.016 - CDS 189171 - 191114 1683 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 - Prom 191144 - 191203 4.2 182 101 Op 2 . - CDS 191205 - 191834 572 ## COG0293 23S rRNA methylase - Prom 191912 - 191971 4.2 + Prom 191733 - 191792 3.0 183 102 Tu 1 . + CDS 191960 - 192253 454 ## PROTEIN SUPPORTED gi|188532496|ref|YP_001906293.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein + Term 192339 - 192378 7.4 - Term 192334 - 192360 1.7 184 103 Tu 1 . - CDS 192409 - 192885 593 ## COG0782 Transcription elongation factor - Prom 193032 - 193091 5.7 + Prom 192971 - 193030 3.2 185 104 Tu 1 . + CDS 193133 - 194566 924 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) + Term 194578 - 194608 3.3 - Term 194560 - 194602 4.0 186 105 Op 1 6/0.145 - CDS 194606 - 195778 1461 ## COG0536 Predicted GTPase 187 105 Op 2 6/0.145 - CDS 195794 - 196759 751 ## PROTEIN SUPPORTED gi|46133178|ref|ZP_00156740.2| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 196802 - 196861 3.6 - Term 196824 - 196857 6.1 188 106 Op 1 32/0.000 - CDS 196886 - 197143 437 ## PROTEIN SUPPORTED gi|15803725|ref|NP_289759.1| 50S ribosomal protein L27 189 106 Op 2 . - CDS 197164 - 197499 562 ## PROTEIN SUPPORTED gi|224585100|ref|YP_002638899.1| 50S ribosomal protein L21 - Prom 197541 - 197600 3.6 + Prom 197601 - 197660 3.2 190 107 Tu 1 . + CDS 197734 - 198705 1047 ## COG0142 Geranylgeranyl pyrophosphate synthase + Prom 198763 - 198822 2.9 191 108 Tu 1 . + CDS 198933 - 199211 308 ## COG3423 Predicted transcriptional regulator 192 109 Op 1 11/0.048 - CDS 199259 - 200518 1472 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 193 109 Op 2 6/0.145 - CDS 200573 - 200842 315 ## COG5007 Predicted transcriptional regulator, BolA superfamily - Prom 200888 - 200947 1.6 - Term 200884 - 200936 6.0 194 110 Op 1 10/0.113 - CDS 200987 - 201280 364 ## COG3113 Predicted NTP binding protein (contains STAS domain) 195 110 Op 2 13/0.016 - CDS 201280 - 201915 935 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 196 110 Op 3 16/0.000 - CDS 201934 - 202485 607 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 197 110 Op 4 23/0.000 - CDS 202490 - 203272 796 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 198 110 Op 5 . - CDS 203280 - 204089 583 ## COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component - Prom 204157 - 204216 4.4 + Prom 204177 - 204236 5.5 199 111 Op 1 6/0.145 + CDS 204299 - 205276 692 ## COG0530 Ca2+/Na+ antiporter 200 111 Op 2 13/0.016 + CDS 205290 - 206276 880 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 201 111 Op 3 11/0.048 + CDS 206297 - 206863 732 ## COG1778 Low specificity phosphatase (HAD superfamily) 202 111 Op 4 12/0.032 + CDS 206860 - 207435 448 ## COG3117 Uncharacterized protein conserved in bacteria 203 111 Op 5 19/0.000 + CDS 207404 - 207961 586 ## COG1934 Uncharacterized protein conserved in bacteria 204 111 Op 6 17/0.000 + CDS 207968 - 208693 287 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 205 111 Op 7 11/0.048 + CDS 208741 - 210174 1363 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 206 111 Op 8 11/0.048 + CDS 210197 - 210484 462 ## PROTEIN SUPPORTED gi|227335124|ref|ZP_03838780.1| hypothetical protein CIT292_04930 + Term 210513 - 210550 8.2 207 112 Op 1 8/0.113 + CDS 210602 - 211093 382 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 208 112 Op 2 7/0.129 + CDS 211139 - 211993 845 ## COG1660 Predicted P-loop-containing kinase 209 112 Op 3 . + CDS 211990 - 212262 277 ## COG1925 Phosphotransferase system, HPr-related proteins + Prom 212306 - 212365 2.6 210 113 Tu 1 . + CDS 212476 - 213108 512 ## B21_03023 hypothetical protein - Term 212871 - 212911 3.7 211 114 Op 1 3/0.790 - CDS 213105 - 213776 485 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 212 114 Op 2 2/0.903 - CDS 213830 - 214483 776 ## COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis - Prom 214537 - 214596 3.7 213 115 Op 1 4/0.468 - CDS 214713 - 217049 2684 ## COG0642 Signal transduction histidine kinase - Prom 217073 - 217132 3.4 214 115 Op 2 . - CDS 217145 - 218074 824 ## COG1242 Predicted Fe-S oxidoreductase 215 116 Op 1 21/0.000 + CDS 218749 - 223209 4763 ## COG0069 Glutamate synthase domain 2 216 116 Op 2 3/0.790 + CDS 223222 - 224640 1648 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 224650 - 224696 6.1 + Prom 224667 - 224726 2.3 217 117 Op 1 . + CDS 224824 - 225303 -33 ## COG4804 Uncharacterized conserved protein 218 117 Op 2 . + CDS 225320 - 225625 91 ## S3473 IS600 orf - Term 225491 - 225549 -0.8 219 118 Op 1 3/0.790 - CDS 225701 - 226165 414 ## COG2731 Beta-galactosidase, beta subunit 220 118 Op 2 5/0.258 - CDS 226162 - 227037 326 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 221 118 Op 3 1/0.952 - CDS 227034 - 227723 756 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 222 118 Op 4 4/0.468 - CDS 227771 - 229261 1544 ## COG0477 Permeases of the major facilitator superfamily - Prom 229306 - 229365 2.9 223 119 Tu 1 . - CDS 229370 - 230263 983 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 230298 - 230357 3.7 224 120 Tu 1 . - CDS 230385 - 231176 882 ## COG2186 Transcriptional regulators - Prom 231361 - 231420 6.7 + Prom 231394 - 231453 5.7 225 121 Tu 1 . + CDS 231556 - 232923 1193 ## COG3069 C4-dicarboxylate transporter + Term 232936 - 232975 5.0 - Term 232924 - 232963 5.0 226 122 Op 1 13/0.016 - CDS 232966 - 233463 486 ## COG2969 Stringent starvation protein B 227 122 Op 2 6/0.145 - CDS 233469 - 234107 663 ## PROTEIN SUPPORTED gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase - Term 234422 - 234475 3.4 228 123 Op 1 59/0.000 - CDS 234502 - 234894 650 ## PROTEIN SUPPORTED gi|15803764|ref|NP_289798.1| 30S ribosomal protein S9 229 123 Op 2 5/0.258 - CDS 234910 - 235413 881 ## PROTEIN SUPPORTED gi|226956764|ref|YP_002807559.1| 50S ribosomal subunit protein L13 - Prom 235495 - 235554 5.6 - Term 235502 - 235534 3.1 230 124 Tu 1 . - CDS 235557 - 236528 774 ## COG1485 Predicted ATPase - Prom 236574 - 236633 2.2 + Prom 236705 - 236764 3.3 231 125 Tu 1 . + CDS 236878 - 237276 495 ## COG3105 Uncharacterized protein conserved in bacteria + Term 237287 - 237319 3.8 + Prom 237326 - 237385 4.2 232 126 Op 1 6/0.145 + CDS 237430 - 238797 1492 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Prom 238801 - 238860 4.0 233 126 Op 2 . + CDS 238887 - 239954 1155 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 239977 - 240006 1.2 - Term 239958 - 240001 8.6 234 127 Tu 1 . - CDS 240017 - 240955 1239 ## COG0039 Malate/lactate dehydrogenases - Prom 241159 - 241218 4.3 + Prom 241305 - 241364 5.2 235 128 Tu 1 . + CDS 241390 - 241860 541 ## COG1438 Arginine repressor + Term 241865 - 241904 4.7 + Prom 242036 - 242095 8.4 236 129 Tu 1 . + CDS 242225 - 242488 344 ## G2583_3958 hypothetical protein + Term 242516 - 242546 4.1 237 130 Tu 1 4/0.468 - CDS 242544 - 242816 360 ## COG2732 Barstar, RNAse (barnase) inhibitor - Term 242868 - 242900 3.0 238 131 Op 1 6/0.145 - CDS 242908 - 244875 1508 ## COG1289 Predicted membrane protein 239 131 Op 2 . - CDS 244881 - 245813 898 ## COG1566 Multidrug resistance efflux pump 240 131 Op 3 . - CDS 245821 - 246024 117 ## G2583_3962 hypothetical protein - Prom 246131 - 246190 5.5 + Prom 246107 - 246166 7.2 241 132 Tu 1 . + CDS 246207 - 247136 900 ## COG0583 Transcriptional regulator 242 133 Tu 1 . - CDS 247264 - 248709 1805 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs - Prom 248788 - 248847 4.0 243 134 Op 1 5/0.258 - CDS 248865 - 252665 3081 ## COG3164 Predicted membrane protein 244 134 Op 2 8/0.113 - CDS 252733 - 254202 1623 ## COG1530 Ribonucleases G and E 245 134 Op 3 7/0.129 - CDS 254192 - 254785 585 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 246 134 Op 4 19/0.000 - CDS 254794 - 255282 432 ## COG2891 Cell shape-determining protein 247 134 Op 5 22/0.000 - CDS 255282 - 256385 1116 ## COG1792 Cell shape-determining protein 248 134 Op 6 2/0.903 - CDS 256451 - 257494 1104 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 257534 - 257593 4.9 249 135 Tu 1 . - CDS 257799 - 259739 1170 ## COG2200 FOG: EAL domain - Prom 259831 - 259890 3.7 + Prom 259794 - 259853 3.4 250 136 Op 1 . + CDS 259891 - 260865 1130 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 251 136 Op 2 . + CDS 260902 - 261066 83 ## EcolC_0453 hypothetical protein 252 137 Op 1 27/0.000 + CDS 261843 - 262313 489 ## COG0511 Biotin carboxyl carrier protein 253 137 Op 2 6/0.145 + CDS 262324 - 263673 1428 ## COG0439 Biotin carboxylase + Term 263693 - 263721 3.0 + Prom 263698 - 263757 5.4 254 138 Op 1 4/0.468 + CDS 263782 - 264024 269 ## COG3924 Predicted membrane protein 255 138 Op 2 3/0.790 + CDS 264014 - 265465 1578 ## COG4145 Na+/panthothenate symporter 256 138 Op 3 7/0.129 + CDS 265477 - 266358 1543 ## PROTEIN SUPPORTED gi|15833385|ref|NP_312158.1| ribosomal protein L11 methyltransferase + Term 266412 - 266466 11.8 + Prom 266480 - 266539 5.5 257 139 Op 1 12/0.032 + CDS 266687 - 267652 1101 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase 258 139 Op 2 1/0.952 + CDS 267678 - 267974 401 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator + Term 268004 - 268041 1.4 259 140 Op 1 . + CDS 268060 - 268944 780 ## COG0863 DNA modification methylase + Prom 268949 - 269008 1.9 260 140 Op 2 . + CDS 269028 - 269207 151 ## EcE24377A_3748 hypothetical protein + Term 269221 - 269257 0.1 - Term 269135 - 269176 2.3 261 141 Tu 1 . - CDS 269210 - 269872 503 ## COG1309 Transcriptional regulator - Prom 269988 - 270047 7.9 262 142 Op 1 27/0.000 + CDS 270271 - 271428 936 ## COG0845 Membrane-fusion protein 263 142 Op 2 . + CDS 271440 - 274544 2782 ## COG0841 Cation/multidrug efflux pump + Term 274555 - 274590 3.5 + Prom 274561 - 274620 4.7 264 143 Tu 1 . + CDS 274797 - 275018 254 ## ECH74115_4585 putative lipoprotein + Term 275024 - 275059 5.6 + Prom 275346 - 275405 2.2 265 144 Op 1 6/0.145 + CDS 275449 - 276474 957 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 276482 - 276532 5.2 266 144 Op 2 6/0.145 + CDS 276542 - 277723 856 ## COG4597 ABC-type amino acid transport system, permease component 267 144 Op 3 34/0.000 + CDS 277733 - 278836 892 ## COG0765 ABC-type amino acid transport system, permease component 268 144 Op 4 . + CDS 278844 - 279602 533 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 279629 - 279660 4.1 - 5S_RRNA 279667 - 279788 99.0 # EU285519 [D:5957..6097] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. - TRNA 279820 - 279895 88.7 # Thr GGT 0 0 - 5S_RRNA 279909 - 280039 99.0 # EU285519 [D:5957..6097] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. - LSU_RRNA 280120 - 282096 99.0 # CP001063 [R:2772744..2775646] # 23S ribosomal RNA # Shigella boydii CDC 3083-94 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella. Predicted protein(s) >gi|299857061|gb|ADWS01000003.1| GENE 1 2 - 145 80 47 aa, chain + ## HITS:1 COG:no KEGG:EcHS_A1120 NR:ns ## KEGG: EcHS_A1120 # Name: not_defined # Def: IS621, transposase # Organism: E.coli_HS # Pathway: not_defined # 1 47 280 326 326 93 100.0 2e-18 FRDRLAANGKKGKVILGAMMRKLAQVAYGVLKSGVPFDASRHNPVAA >gi|299857061|gb|ADWS01000003.1| GENE 2 267 - 515 371 82 aa, chain - ## HITS:1 COG:ECs3875 KEGG:ns NR:ns ## COG: ECs3875 COG0298 # Protein_GI_number: 15833129 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 82 1 82 82 152 100.0 1e-37 MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADLLGQWVLVHVGFAMSII DEDEAKATLDALRQMDYDITSA >gi|299857061|gb|ADWS01000003.1| GENE 3 528 - 869 283 113 aa, chain - ## HITS:1 COG:hybF KEGG:ns NR:ns ## COG: hybF COG0375 # Protein_GI_number: 16130891 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Escherichia coli K12 # 1 113 1 113 113 200 100.0 5e-52 MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAVRFSFEIVCHGTVAQGC DLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTGDSLIVKSIEVE >gi|299857061|gb|ADWS01000003.1| GENE 4 862 - 1350 528 162 aa, chain - ## HITS:1 COG:no KEGG:SSON_3137 NR:ns ## KEGG: SSON_3137 # Name: hybE # Def: hydrogenase 2-specific chaperone # Organism: S.sonnei # Pathway: not_defined # 1 162 1 162 162 327 100.0 7e-89 MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSDFTLFEGQWTGCVITPW MLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGVSQYLSCSLMSPLSHSMSI EEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGENA >gi|299857061|gb|ADWS01000003.1| GENE 5 1343 - 1837 616 164 aa, chain - ## HITS:1 COG:ECs3878 KEGG:ns NR:ns ## COG: ECs3878 COG0680 # Protein_GI_number: 15833132 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 289 100.0 2e-78 MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAGMELLGDMANRDHLII ADAIVSKKSAPGTMMILRDEEVPALFTNKISPHQLGLADVLSALRFTGEFPKKLTLVGVI PESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPREAIHD >gi|299857061|gb|ADWS01000003.1| GENE 6 1837 - 3540 1911 567 aa, chain - ## HITS:1 COG:ECs3879 KEGG:ns NR:ns ## COG: ECs3879 COG0374 # Protein_GI_number: 15833133 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I large subunit # Organism: Escherichia coli O157:H7 # 1 567 1 567 567 1185 100.0 0 MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRI CGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALDWVDIT SALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVASGQLGIFANGYWGHPAMKLP PEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNLAVGGVANPINLDGLGVLNLERL MYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRGKGAVNYLSVPEFPTDSKNGSFLFP GGYIENADLSSYRPITSHSDEYLIKGIQESAKHSWYKDEAPQAPWEGTTIPAYDGWSDDG KYSWVKSPTFYGKTVEVGPLANMLVKLAAGRESTQNKLNEIVAIYQKLTGNTLEVAQLHS TLGRIIGRTVHCCELQDILQNQYSALITNIGKGDHTTFVKPNIPATGEFKGVGFLEAPRG MLSHWMVIKDGIISNYQAVVPSTWNSGPRNFNDDVGPYEQSLVGTPVADPNKPLEVVRTI HSFDPCMACAVHVVDADGNEVVSVKVL >gi|299857061|gb|ADWS01000003.1| GENE 7 3537 - 4715 1552 392 aa, chain - ## HITS:1 COG:hybB KEGG:ns NR:ns ## COG: hybB COG5557 # Protein_GI_number: 16130895 # Func_class: C Energy production and conversion # Function: Polysulphide reductase # Organism: Escherichia coli K12 # 1 392 1 392 392 717 99.0 0 MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSDLNGGFPWGVWIAFDLL IGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLGGLSITIDVGRYWNLPYFY IPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWKVSLKRLNKVMFFIIALGALL PTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAFIMGFSIVIFEGSLVQAGLRGNG PDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLSLAFAGDFYSVMFWIEVLLMLFPLV VLRVAKLRNDSRMLFLSALSALLGCATWRLTYSLVAFNPGGGYAYFPTWEELLISIGFVA IEICAYIVLIRLLPILPPLKQNDHNRHEASKA >gi|299857061|gb|ADWS01000003.1| GENE 8 4705 - 5691 1021 328 aa, chain - ## HITS:1 COG:ECs3881 KEGG:ns NR:ns ## COG: ECs3881 COG0437 # Protein_GI_number: 15833135 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 328 1 328 328 674 100.0 0 MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDSTLCVGCQACVTKCQDI NFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEENGYAYIKKQCMHCVDPNC VSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYDYNNPFGALHKCELCNQK GVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRLALKPGSEYHYPRQTLKSGDTYL HTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPKLDDLSTGARSENIQHTLYKGMMLP LAVLAGLTVLVRRNTKNDHHDGGDDHES >gi|299857061|gb|ADWS01000003.1| GENE 9 5694 - 6812 1120 372 aa, chain - ## HITS:1 COG:ECs3882 KEGG:ns NR:ns ## COG: ECs3882 COG1740 # Protein_GI_number: 15833136 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I small subunit # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 703 100.0 0 MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVTNPQRPPVIWIGAQECT GCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDGS IPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVL PGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKNRPTFAYGRLIHEHCERRPHFDA GRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQFCDVGGVWPVAIGHPCYGCNEEGI GFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSAGAIGLLGGVVGLVAGVSVMAVRELGR QQKKDNADSRGE >gi|299857061|gb|ADWS01000003.1| GENE 10 7001 - 7288 275 95 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_3148 NR:ns ## KEGG: ECIAI1_3148 # Name: yghW # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 95 1 95 95 184 100.0 8e-46 MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGIL TRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN >gi|299857061|gb|ADWS01000003.1| GENE 11 7407 - 8294 943 295 aa, chain - ## HITS:1 COG:Z4353 KEGG:ns NR:ns ## COG: Z4353 COG0412 # Protein_GI_number: 15803544 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Escherichia coli O157:H7 EDL933 # 1 295 14 308 308 582 98.0 1e-166 MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTALALFDLLKPNYALATQ VEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARR VAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTKLMNDFFAAIEFMQRYPQAAGKV GITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADVAKIEAPLLLHFAELDTRINEGW PAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS >gi|299857061|gb|ADWS01000003.1| GENE 12 8451 - 9491 1020 346 aa, chain + ## HITS:1 COG:yghZ KEGG:ns NR:ns ## COG: yghZ COG0667 # Protein_GI_number: 16130899 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 346 1 346 346 692 99.0 0 MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHF DLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASL DQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVE LLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQ DSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLI GASRAEQLEENVQALNNLTFSTKELAQIDQHIADGELNLWQASSDK >gi|299857061|gb|ADWS01000003.1| GENE 13 9531 - 10025 641 164 aa, chain - ## HITS:1 COG:ECs3886 KEGG:ns NR:ns ## COG: ECs3886 COG2862 # Protein_GI_number: 15833140 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 271 100.0 5e-73 MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPNIFSMAESDLILVLLSL VDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIH LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLTRHNH >gi|299857061|gb|ADWS01000003.1| GENE 14 10216 - 11100 988 294 aa, chain + ## HITS:1 COG:ECs3887 KEGG:ns NR:ns ## COG: ECs3887 COG1028 # Protein_GI_number: 15833141 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 294 1 294 294 555 99.0 1e-158 MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSG IGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVH EAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGAS IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG GQTQDKIPQFGQKTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG >gi|299857061|gb|ADWS01000003.1| GENE 15 11372 - 11797 554 141 aa, chain - ## HITS:1 COG:ECs3889 KEGG:ns NR:ns ## COG: ECs3889 COG0848 # Protein_GI_number: 15833143 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 252 100.0 2e-67 MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVDVKVNLPASTSTPQPRP EKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMD TLHQAGYLKIGLVGEETAKAK >gi|299857061|gb|ADWS01000003.1| GENE 16 11804 - 12523 862 239 aa, chain - ## HITS:1 COG:ECs3890 KEGG:ns NR:ns ## COG: ECs3890 COG0811 # Protein_GI_number: 15833144 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Escherichia coli O157:H7 # 1 239 6 244 244 441 100.0 1e-124 MQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEA RSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQ MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG >gi|299857061|gb|ADWS01000003.1| GENE 17 12790 - 13977 1094 395 aa, chain + ## HITS:1 COG:metC KEGG:ns NR:ns ## COG: metC COG0626 # Protein_GI_number: 16130906 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli K12 # 1 395 1 395 395 816 99.0 0 MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRG TLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFVEQGDHVLMTNTAYEPSQDFCSK ILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDA IIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLM GQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFW KRDFTGSSGLFSFVLKKKLSNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRP QGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARIV >gi|299857061|gb|ADWS01000003.1| GENE 18 14117 - 14776 570 219 aa, chain + ## HITS:1 COG:ECs3893 KEGG:ns NR:ns ## COG: ECs3893 COG0586 # Protein_GI_number: 15833147 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 384 100.0 1e-106 MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLPASFLPGDSLLILAGAL IAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGWLAQLPAKYHQRATCMFDR HGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLSGLLWVSVVTSFGYALSMIPF VKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNA >gi|299857061|gb|ADWS01000003.1| GENE 19 14816 - 15715 852 299 aa, chain - ## HITS:1 COG:yqhC KEGG:ns NR:ns ## COG: yqhC COG2207 # Protein_GI_number: 16130908 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 299 77 375 375 594 99.0 1e-170 MKREEICRLLADKVNKLKIKENSLSELLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN >gi|299857061|gb|ADWS01000003.1| GENE 20 15909 - 17072 1552 387 aa, chain + ## HITS:1 COG:yqhD KEGG:ns NR:ns ## COG: yqhD COG1979 # Protein_GI_number: 16130909 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Escherichia coli K12 # 1 387 1 387 387 780 99.0 0 MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALKGMDVL EFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHIL QTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDKQAFHSAHVQPVFAVLDPVYT YTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAEGILLTLIEDGPKALKEPENYDV RANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRETK RAKLLQYAERVWNITEGSDDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIPALLKKL EEHGMTQLGENHDITLDVSRRIYEAAR >gi|299857061|gb|ADWS01000003.1| GENE 21 17177 - 18004 876 275 aa, chain + ## HITS:1 COG:STM3165 KEGG:ns NR:ns ## COG: STM3165 COG0656 # Protein_GI_number: 16766465 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Salmonella typhimurium LT2 # 1 275 1 275 275 497 92.0 1e-141 MANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKA LKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAW KGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHK IQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAE NFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG >gi|299857061|gb|ADWS01000003.1| GENE 22 18204 - 19130 627 308 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3430 NR:ns ## KEGG: EC55989_3430 # Name: yqhG # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 308 1 308 308 609 100.0 1e-173 MKIILLFLAALASFTVHAQPPSLTVEQTVRHIYQNYKSDATAPYFGETGERAITSARIQQ ALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTDADHADAVVRFRIFKDDKE KTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLAALASLQKEQPEAFVAELFEH IADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDMQIERQFIYDNPICFGEESLFSR VDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQRREGKWEIADFIRPNSGSLLKQIEA KTAARLKQ >gi|299857061|gb|ADWS01000003.1| GENE 23 19181 - 19438 302 85 aa, chain + ## HITS:1 COG:yqhH KEGG:ns NR:ns ## COG: yqhH COG4238 # Protein_GI_number: 16130912 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein lipoprotein # Organism: Escherichia coli K12 # 1 85 1 85 85 149 100.0 2e-36 MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSE ANRANTRLDAQDYFDCLRCLRMYAE >gi|299857061|gb|ADWS01000003.1| GENE 24 19481 - 21700 2216 739 aa, chain - ## HITS:1 COG:ECs3900 KEGG:ns NR:ns ## COG: ECs3900 COG1032 # Protein_GI_number: 15833154 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 739 1 739 739 1516 99.0 0 MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS FGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRR LRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR RSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKV KGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRV PHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE AMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASST QSRPVNAGAKKRPKAAVGR >gi|299857061|gb|ADWS01000003.1| GENE 25 21811 - 23223 1202 470 aa, chain - ## HITS:1 COG:ECs3901 KEGG:ns NR:ns ## COG: ECs3901 COG2132 # Protein_GI_number: 15833155 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Escherichia coli O157:H7 # 1 470 1 470 470 930 100.0 0 MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRRGQPLFMTVQRAHWSFT PGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARMM SPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVD DFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQSPYVEVSRGWVRLRLLNASNSR RYQLQMSDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAAS IVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDISLGD DPGINGQLWDVNRIDVTAQQGTWERWTVRADEPQAFHIEGVMFQIRNVNGAMPFPEDRGW KDTVWVDGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP >gi|299857061|gb|ADWS01000003.1| GENE 26 23298 - 24035 614 245 aa, chain - ## HITS:1 COG:ECs3902 KEGG:ns NR:ns ## COG: ECs3902 COG0204 # Protein_GI_number: 15833156 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 515 100.0 1e-146 MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPAD AESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNN RTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVS TTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAERE AAGKV >gi|299857061|gb|ADWS01000003.1| GENE 27 24269 - 26527 2499 752 aa, chain - ## HITS:1 COG:ECs3903 KEGG:ns NR:ns ## COG: ECs3903 COG0188 # Protein_GI_number: 15833157 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Escherichia coli O157:H7 # 1 752 1 752 752 1458 99.0 0 MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKF KKSARTVGDVLGKYHPHGDIACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRY TESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDI PPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVR MRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIV PRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRR RLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILEL KLRHLAKLEEMKIRGEQSEREKERDQLQGILASERKMNNLLKKELQADAQAYGDDRRSPL QEREEAKAMSEHDMLPSEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSN QPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDA GYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDL PQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGE RGRRGTLMRGLQRIDRVEIDSPRRASSGDSEE >gi|299857061|gb|ADWS01000003.1| GENE 28 26665 - 26754 76 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPSGVAWAQTCAALYADQVYSKELYIKAH >gi|299857061|gb|ADWS01000003.1| GENE 29 27073 - 27555 454 160 aa, chain - ## HITS:1 COG:ECs3905 KEGG:ns NR:ns ## COG: ECs3905 COG3449 # Protein_GI_number: 15833159 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 332 98.0 3e-91 MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWD DPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIR HWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA >gi|299857061|gb|ADWS01000003.1| GENE 30 27608 - 28000 525 130 aa, chain - ## HITS:1 COG:ECs3906 KEGG:ns NR:ns ## COG: ECs3906 COG3111 # Protein_GI_number: 15833160 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 130 1 130 130 243 100.0 5e-65 MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNGSVTTVESAKSLRDDTW VTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPKDTVEIQGEVDKDWNSVEI DVKQIRKVNP >gi|299857061|gb|ADWS01000003.1| GENE 31 28152 - 28811 812 219 aa, chain + ## HITS:1 COG:ECs3907 KEGG:ns NR:ns ## COG: ECs3907 COG0745 # Protein_GI_number: 15833161 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 423 100.0 1e-118 MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGR DILREWREKGQREPVLILTARDALEERVEGLRLGADDYLCKPFALIEVAARLEALMRRTN GQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLELLMRNAGRVLPRKLIEEKLYT WDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGEK >gi|299857061|gb|ADWS01000003.1| GENE 32 28808 - 30157 1148 449 aa, chain + ## HITS:1 COG:ZygiY KEGG:ns NR:ns ## COG: ZygiY COG0642 # Protein_GI_number: 15803568 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 449 1 449 449 850 98.0 0 MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLMLFAKRLSTLDL NEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDGDNGEDIPYSYQREGFADG QLVGDKDQWRFVWMTSPDGKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPIMLIIMMV LLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRF TSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHYGIDRATRLVDQLLTLSRLD SLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHGIKRTGQPLLLSLLVRNL LDNAVRYSPQGSVIDVTLNADNFIVRDNGPGVTPEALARIGERFYRPPGQTATGSGLGLS IVQRIAKLHGMNVEFGNAEQGGFEAKVSW >gi|299857061|gb|ADWS01000003.1| GENE 33 30203 - 30433 59 76 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3705 NR:ns ## KEGG: ECO103_3705 # Name: ygiZ # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 76 35 110 110 112 100.0 4e-24 MLESGDNICSIPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMREMFEFWVYVFSLGIC LVCGWWLFWGRFIFCY >gi|299857061|gb|ADWS01000003.1| GENE 34 30854 - 31222 387 122 aa, chain + ## HITS:1 COG:ECs3910 KEGG:ns NR:ns ## COG: ECs3910 COG2249 # Protein_GI_number: 15833164 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 106 1 106 193 221 100.0 4e-58 MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA DVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKNTVPAAWYRAKNIC FL >gi|299857061|gb|ADWS01000003.1| GENE 35 31210 - 31434 276 74 aa, chain + ## HITS:1 COG:ECs3910 KEGG:ns NR:ns ## COG: ECs3910 COG2249 # Protein_GI_number: 15833164 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 74 120 193 193 161 100.0 3e-40 MLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPR YTEEYRKHLVEIFG >gi|299857061|gb|ADWS01000003.1| GENE 36 31465 - 31779 399 104 aa, chain + ## HITS:1 COG:ECs3911 KEGG:ns NR:ns ## COG: ECs3911 COG1359 # Protein_GI_number: 15833165 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 104 1 104 104 199 100.0 9e-52 MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSI VMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQPGI >gi|299857061|gb|ADWS01000003.1| GENE 37 31827 - 33719 1966 630 aa, chain - ## HITS:1 COG:parE KEGG:ns NR:ns ## COG: parE COG0187 # Protein_GI_number: 16130926 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Escherichia coli K12 # 1 630 1 630 630 1299 99.0 0 MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHAKRVDVILH ADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVN ALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFS VSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDGLNDYLAEAVNGLPTLPEKPFIG NFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNI LPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFILWLNQ NVQAAELLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTAQDLNRTELFLVEGD SAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLATQEVHDISVAIGIDPDSDDLSQL RYGKICILADADSDGLHIATLLCALFVKHFRALVKHGHVYVALPPLYRIDLGKEVYYALT EEEKEGVLEQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTD AMMDMLLAKKRSEDRRNWLQEKGDMAEIEV >gi|299857061|gb|ADWS01000003.1| GENE 38 33748 - 34329 501 193 aa, chain - ## HITS:1 COG:ECs3919 KEGG:ns NR:ns ## COG: ECs3919 COG3150 # Protein_GI_number: 15833173 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 387 99.0 1e-108 MSTLLYLHGFNSSPRSAKASLLKNWLAEHHLDVEMIIPQLPPYPSDAAELLESIVLEHGG DSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESR HIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYASCRQTVIEGGNHAFTGFEDY FNPIVDFLGLHHL >gi|299857061|gb|ADWS01000003.1| GENE 39 34329 - 35156 746 275 aa, chain - ## HITS:1 COG:ECs3920 KEGG:ns NR:ns ## COG: ECs3920 COG1409 # Protein_GI_number: 15833174 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Escherichia coli O157:H7 # 1 275 1 275 275 528 100.0 1e-150 MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQAVLEAIRPHQHEFDLIV ATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMYSALQDAGISPAKRVFIGE QWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTLLLLHHHPLPAGCSWLDQHSL RNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLLATPSTCVQFKPHCSNFTLDTIA PGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY >gi|299857061|gb|ADWS01000003.1| GENE 40 35181 - 35603 151 140 aa, chain - ## HITS:1 COG:ECs3921 KEGG:ns NR:ns ## COG: ECs3921 COG3151 # Protein_GI_number: 15833175 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 140 1 140 140 274 100.0 4e-74 MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVT IEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ FLADWLRYCLAHGAMAIPVY >gi|299857061|gb|ADWS01000003.1| GENE 41 35604 - 36233 560 209 aa, chain - ## HITS:1 COG:ECs3922 KEGG:ns NR:ns ## COG: ECs3922 COG0494 # Protein_GI_number: 15833176 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 405 100.0 1e-113 MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAA VLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI VKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWV EEGKIDNAASVIALQWLQLHHQALKNEWA >gi|299857061|gb|ADWS01000003.1| GENE 42 36438 - 37919 1637 493 aa, chain + ## HITS:1 COG:tolC KEGG:ns NR:ns ## COG: tolC COG1538 # Protein_GI_number: 16130931 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli K12 # 1 493 3 495 495 801 100.0 0 MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPL LPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTY QTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR AQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEK RNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSN MGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASI SSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQL NIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPVVQQTSA RTTTSNGHNPFRN >gi|299857061|gb|ADWS01000003.1| GENE 43 38067 - 38738 434 223 aa, chain + ## HITS:1 COG:ygiB KEGG:ns NR:ns ## COG: ygiB COG5463 # Protein_GI_number: 16130933 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 223 12 234 234 360 100.0 1e-99 MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLAGCEKSDETVSLYQNADDCSAANPGK SAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGS FWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDATGKNYGAAQPGRTMTVP KTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSSRSMGG >gi|299857061|gb|ADWS01000003.1| GENE 44 38744 - 39904 1168 386 aa, chain + ## HITS:1 COG:ECs3926 KEGG:ns NR:ns ## COG: ECs3926 COG0754 # Protein_GI_number: 15833180 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Escherichia coli O157:H7 # 1 386 1 386 386 791 100.0 0 MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCL KVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADT PTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCR DTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFML REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYV VKPIFSREGANVSIIENGKTIEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQP AGIGIREDRALITQDMSRFYPHIFVE >gi|299857061|gb|ADWS01000003.1| GENE 45 39942 - 40730 765 262 aa, chain - ## HITS:1 COG:ECs3927 KEGG:ns NR:ns ## COG: ECs3927 COG3384 # Protein_GI_number: 15833181 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 262 10 271 271 503 98.0 1e-142 MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVVVSAHWFTRGTGVTAME TPPTIHDFGGFPQALYDTHYPAPGSPVLAQHLVELLAPVPVTLDKEAWGFDHGSWGVLIK MYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSS PYPWAMSFNEYVKANLTWQGAVEQHPLVNYLDHEGGALSNPTPEHYLPLLYVLGAWDGQE PITIPVDGIEMGSLSMLSVQIG >gi|299857061|gb|ADWS01000003.1| GENE 46 40873 - 41646 926 257 aa, chain + ## HITS:1 COG:ECs3928 KEGG:ns NR:ns ## COG: ECs3928 COG0428 # Protein_GI_number: 15833182 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Escherichia coli O157:H7 # 1 257 1 257 257 392 100.0 1e-109 MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAE GMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLPKSIKRTAILLTLGISLHN FPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAILWAGISGLA EILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCG MSVMGFSLVLLQTAGIG >gi|299857061|gb|ADWS01000003.1| GENE 47 41704 - 41874 235 56 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_3528 NR:ns ## KEGG: ECUMN_3528 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 56 9 64 64 102 100.0 5e-21 MFIAWYWIVLIALVVVGYFLHLKRYCRAFRQDRDALLEARNKYLNSTREETAEKVE >gi|299857061|gb|ADWS01000003.1| GENE 48 42135 - 42788 775 217 aa, chain - ## HITS:1 COG:ECs3929 KEGG:ns NR:ns ## COG: ECs3929 COG0108 # Protein_GI_number: 15833183 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 217 1 217 217 412 100.0 1e-115 MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIR HGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRA AIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDG TMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS >gi|299857061|gb|ADWS01000003.1| GENE 49 43162 - 43452 330 96 aa, chain + ## HITS:1 COG:yqiC KEGG:ns NR:ns ## COG: yqiC COG2960 # Protein_GI_number: 16130938 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 96 21 116 116 134 98.0 4e-32 MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRQTLQAQLTRLDLVSREEFDVQTQVLL RTREKLALLEQRMSELENRSTEIKKQPDPETLPPTL >gi|299857061|gb|ADWS01000003.1| GENE 50 43735 - 44286 526 183 aa, chain + ## HITS:1 COG:ygiL KEGG:ns NR:ns ## COG: ygiL COG3539 # Protein_GI_number: 16130939 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 183 1 183 183 337 99.0 7e-93 MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADT VLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTMTGQTDLLKNTKETEIGGA TGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMESPSKDATPGNVYAQADYKI AYE >gi|299857061|gb|ADWS01000003.1| GENE 51 44346 - 46850 1091 834 aa, chain + ## HITS:1 COG:yqiG KEGG:ns NR:ns ## COG: yqiG COG3188 # Protein_GI_number: 16130942 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 23 834 10 821 821 1555 97.0 0 MYKKLKLTTISELIKNIYCSLSVLIIGCASAYAVEFNKDLIEAEDRENVNLSQFETDGQL PVGKYSLNALINNKRTPIHLDLQWVLIDNQTAVCLTPEQLTLLGFTDEIIEVAQQNLIDG CYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPPELWDHGIAGAFLDYNLYASH YAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQANNLDFPRIYLFRPIPA INAKLTIGQYDTESSIFDSFHFSGVSLKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQN NRIIYQENVPPGPFAITNLFNTLQGQLDVKVEEEDGQVTQWQVASNSIPYLTRKGQIRYT TAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNVSLYGGSVLTNRDYQSLAAGVGFNLNSLG SLSFDVTRSDAQLHNQDKETGYSYRANYSKRFESTGSQLTFAGYRFSDKNFVTMNEYIND TNHYTNYQNEKESYIVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPL KNVSTSLTFSRINWEEDNQDQLYLNISIPWGTSRTLSYGMQRNQDNKISHTASWYDSSDR NNSWSVSASGDNDEFKDMKASLRASYQHNTENGRLYLSGTSQRDSYYSLNASWNGSFTAT RHGAAFHDYSGSADSRFMIDADGAEDIPLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTR NLPENVDIENSVITTTLTEGAIGYAKLDTRKGYQIMGVIRLADGSHPPLGISVKDKTSHK ELGLVADGGFVYLNGIQDDSKLTLRWGDKSCFIQPPNSSNLTTGTVILPCISQN >gi|299857061|gb|ADWS01000003.1| GENE 52 46866 - 47615 431 249 aa, chain + ## HITS:1 COG:yqiH KEGG:ns NR:ns ## COG: yqiH COG3121 # Protein_GI_number: 16130943 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 249 4 252 252 480 93.0 1e-135 MRYLNTKNLIAAGVLLACMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQT WIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMISQEKIAQLPNDRETLFYFNVREIPPK TDKKNVMQVTMQHALKLFWRPKAIELEDDGVMSYEKVEIIRRNDGSIRFNNKMPYHVTLG YIGTNGITMLPQTQSLMVTPYSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC NVSVAKRDK >gi|299857061|gb|ADWS01000003.1| GENE 53 47617 - 48681 329 354 aa, chain + ## HITS:1 COG:no KEGG:SSON_3184 NR:ns ## KEGG: SSON_3184 # Name: yqiI # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 354 1 354 354 689 100.0 0 MRYLLIVIIFIIGFSALPVWAMDCYAEHEGGNTVVIGYVPRISIPSNGKKGDKIWQSSEY FMNVFCNNALPAPSPGEEYPSAWTNIMMFLPGGQDFYNQNSYIFGVTYNGVDYDSTAPNA IAAPECIDIKGAGTFNNHYKNPAVCSGGPEPQLSVTFPARVQLYIKLAKNANRVNKNLVL PDEYIALEFKGMSGAGAIEVDKNLTFRIRGLNNIHVLDCFVNVALEPADGVVDFGKINSR TIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTTDILSDYSHLDMGNGLLLKIFHKDG TATEFNRFSQFASFSSSSAPSVTAPFRAELSANPAETVVEGPFSKDVILKITYN >gi|299857061|gb|ADWS01000003.1| GENE 54 48724 - 48924 226 66 aa, chain - ## HITS:1 COG:no KEGG:SSON_3186 NR:ns ## KEGG: SSON_3186 # Name: glgS # Def: glycogen synthesis protein GlgS # Organism: S.sonnei # Pathway: not_defined # 1 66 1 66 66 126 100.0 2e-28 MDHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTWFCARYAWYCQQMMQAR ELELEH >gi|299857061|gb|ADWS01000003.1| GENE 55 49193 - 49822 208 209 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3727 NR:ns ## KEGG: ECO103_3727 # Name: yqiJ # Def: putative inner membrane protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 209 1 209 209 407 99.0 1e-112 MILFADYNTPYLFTISFVLLIGLLEILALICGHMLSGALDAHLDHYDSITTGHISQALHY LNIGRLPALVVLCLLAGFFGLIGILLQHACIMVWQSPLSNLFVVPVSLLFTIIAVHYTGK IVAPWIPRDHSSAITEEEYIGSMALITGHQATSGNPCEGKLTDQFGQIHYLLLEPEEGKF FTKGDKVLIICRLSATRYLAENNPWPQIL >gi|299857061|gb|ADWS01000003.1| GENE 56 49849 - 51510 1748 553 aa, chain + ## HITS:1 COG:ECs3933 KEGG:ns NR:ns ## COG: ECs3933 COG2268 # Protein_GI_number: 15833187 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 553 1 553 553 808 98.0 0 MDDIVNSVPSWMFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIV MPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIATAAQTLG QRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAEDLSKNGLELE SVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALS RKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRILAERQIQETEIER EQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANLALAEAVS AQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAEKEAAEMQAAAIVELAEA TRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPAVIEKSVEPMKSIDGIKIIQ VDGLNRGSAAGDANTGNVGGGNLAEQALSAALSYRTQAPLIDSLLNEIGVSDGSLAALTS PLTSTTPVAENVE >gi|299857061|gb|ADWS01000003.1| GENE 57 52304 - 53737 1890 477 aa, chain - ## HITS:1 COG:rfaE KEGG:ns NR:ns ## COG: rfaE COG2870 # Protein_GI_number: 16130948 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Escherichia coli K12 # 1 477 1 477 477 916 100.0 0 MKVTLPEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVNTIEERPGGAANVAMNI ASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLD FEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASVQQMIQLARKAGVPVLIDPKG TDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMKLIADYELSALLVTRSEQGMSLL QPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNSLEEACFFANAAAGVVVGKLGT STVSPIELENAVRGRADTGFGVMTEEELKLAVAAARKRGEKVVMTNGVFDILHAGHVSYL ANARKLGDRLIVAVNSDASTKRLKGDSRPVNPLEQRMIVLGALEAVDWVVSFEEDTPQRL IAGILPDLLVKGGDYKPEEIAGSKEVWANGGEVLVLNFEDGCSTTNIIKKIQQDKKG >gi|299857061|gb|ADWS01000003.1| GENE 58 53785 - 56625 2771 946 aa, chain - ## HITS:1 COG:glnE KEGG:ns NR:ns ## COG: glnE COG1391 # Protein_GI_number: 16130949 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Escherichia coli K12 # 1 946 1 946 946 1802 99.0 0 MKPLSSPLQQYWQTVVERLPEPLAEKSLSAQAKSVLTFSDFVQDSVIAHPEWLTELESQS PQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVRIAWAQTLALVTEESILQQLS HLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGMGKLGGGELNFSSDIDLIFAW PEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGFVYRVDMRLRPFGESGPLVLSFA ALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELRAMLRPFVFRRYIDFSVIQSLRNMK GMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQLIRGGREPSLQSRSLLPTLSAIAALH LLSENDAEQLRVAYLFLRRLENLLQSINDEQTQTLPSDELNRARLAWAMDFADWPQLTGA LTAHMTNVRRVFNELIGDDESETQEESLSEQWRELWQDALQEDDTTPVLAHLSEDDRKQV LTLIADFRKELDKRTIGPRGRQVLDHLMPHLLSDVCAREDAAVTLSRITALLVGIVTRTT YLELLSEFRAALKHLISLCAASPMIASQLARYPLLLDELLDPNTLYQPTATDAYRDELRQ YLLRVPEDDEEQQLEALRQFKQAQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQ AWVQMVARYGKPNHLNDREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGER EIDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAW TWEHQALVRARVVYGDPQLTAHFDAVRREIMTLPREGKTLQTEVREMREKMRAHLGNKHR DRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMAL TRAYTTLRDELHHLALQELPGHVPEDCFTAERELVRASWQKWLVEE >gi|299857061|gb|ADWS01000003.1| GENE 59 56648 - 57949 1433 433 aa, chain - ## HITS:1 COG:ECs3937 KEGG:ns NR:ns ## COG: ECs3937 COG3025 # Protein_GI_number: 15833191 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 433 1 433 433 832 98.0 0 MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGE NGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLF STDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICELELELLSGDTRAVLKLANQLVS QTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHE ELWVRGNDAAKEQVLAAIGLVRHALMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTA VYSTETAMAKLALTEWLVSKAWQPFLDAKAQSKMSDSFKRFADIHLSRHAAELKSVFCQP LGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQGLRHAIATGQRIEIEHFRNEA NNQEPFWLHSGKR >gi|299857061|gb|ADWS01000003.1| GENE 60 58191 - 58811 626 206 aa, chain + ## HITS:1 COG:ECs3938 KEGG:ns NR:ns ## COG: ECs3938 COG3103 # Protein_GI_number: 15833192 # Func_class: T Signal transduction mechanisms # Function: SH3 domain protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 347 99.0 8e-96 MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTVNAGEEVTLLQ TDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRT AEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASVQLDDKQRTIIMQWFMYGGGV LGLGLLLGLVLPHLIPTRKRKDRWMN >gi|299857061|gb|ADWS01000003.1| GENE 61 58875 - 60113 1048 412 aa, chain + ## HITS:1 COG:ECs3939 KEGG:ns NR:ns ## COG: ECs3939 COG0617 # Protein_GI_number: 15833193 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Escherichia coli O157:H7 # 1 412 1 412 412 833 99.0 0 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLTLMREMTHAGELEHLTPERVWKE TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPARWHPEIDTGIHTLMTLSMAA MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAIASWKEQRCPKPD >gi|299857061|gb|ADWS01000003.1| GENE 62 60276 - 61097 1015 273 aa, chain - ## HITS:1 COG:ECs3940 KEGG:ns NR:ns ## COG: ECs3940 COG1968 # Protein_GI_number: 15833194 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Escherichia coli O157:H7 # 1 273 1 273 273 481 99.0 1e-136 MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDTAKTFEVVIQLGSILAV VVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPAVVLGLLFHDTIKSLFNPI NVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMIGCFQCLALWPGFSRSGATIS GGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGFLTTGDIPMFAVGFITAFVVALI AIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF >gi|299857061|gb|ADWS01000003.1| GENE 63 61187 - 61555 445 122 aa, chain - ## HITS:1 COG:folB KEGG:ns NR:ns ## COG: folB COG1539 # Protein_GI_number: 16130954 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Escherichia coli K12 # 1 122 2 123 123 222 100.0 1e-58 MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETV VSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERGNNLKE NN >gi|299857061|gb|ADWS01000003.1| GENE 64 61660 - 62277 536 205 aa, chain + ## HITS:1 COG:ECs3942 KEGG:ns NR:ns ## COG: ECs3942 COG0344 # Protein_GI_number: 15833196 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 388 100.0 1e-108 MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLI FDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGW DLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDN IQRLWRRQETKIWTKFKRKREKDPE >gi|299857061|gb|ADWS01000003.1| GENE 65 62290 - 63222 860 310 aa, chain - ## HITS:1 COG:ygiP KEGG:ns NR:ns ## COG: ygiP COG0583 # Protein_GI_number: 16130956 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 310 1 310 310 640 100.0 0 MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGV ALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMR NYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYP QPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKG IMLRSEWDVLPFLESGKLVQVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRL GKPDEGYQVM >gi|299857061|gb|ADWS01000003.1| GENE 66 63432 - 64340 249 302 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 24 300 21 297 508 100 26 1e-43 MSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAETSSMGKIIYHTMFDNMQ KAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVEEATVKAPLRHNAVEIFDEV NTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPGRSKVLMPSEGYEGVVKFVFEN ISALAVNACPPVLVGVGIATSVETAAVLSRKAILRPIGSRHPNPKAAELELRLEEGLNRL EIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTGCWAHRRGTLLVHADLTFENLSHTRS AL >gi|299857061|gb|ADWS01000003.1| GENE 67 64313 - 64942 248 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 1 199 305 504 508 100 30 1e-43 SVSHPERVMKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELKRPIPYDLN GKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGKGGMGPLTEEG CQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEFGPLIVSIDTHGN NLIAENKKLFAERRDPIVEEICEHVHYIK >gi|299857061|gb|ADWS01000003.1| GENE 68 64991 - 66454 1466 487 aa, chain + ## HITS:1 COG:ECs3946 KEGG:ns NR:ns ## COG: ECs3946 COG0471 # Protein_GI_number: 15833200 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 487 1 487 487 801 100.0 0 MKPSTEWWRYLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMV GISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTG LGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPPLYQSQ PNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDWFLGML PLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVGALVLW IFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFI SWFGKLLAGSLSGYSPTMVMVALIVVFYLLRYFFASATAYTSALAPMMIAAALAMPEIPL PVFCLMVGAAIGLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLL WMPVVLL >gi|299857061|gb|ADWS01000003.1| GENE 69 66497 - 67510 656 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 3 321 519 846 860 257 44 4e-67 MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQ AALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLAPM LEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGG PLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDDQTRADIARAFE DAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMKKRRGEVFYARPEFCTD NGAMIAYAGMVRFKAGATADLGVSVRPRWPLAELPAA >gi|299857061|gb|ADWS01000003.1| GENE 70 67748 - 67963 357 71 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 [Escherichia coli O157:H7 EDL933] # 1 71 1 71 71 142 100 2e-32 MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKL ARENARRTRLY >gi|299857061|gb|ADWS01000003.1| GENE 71 68074 - 69819 1420 581 aa, chain + ## HITS:1 COG:ECs3949 KEGG:ns NR:ns ## COG: ECs3949 COG0358 # Protein_GI_number: 15833203 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Escherichia coli O157:H7 # 1 581 1 581 581 1191 100.0 0 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLN HMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK >gi|299857061|gb|ADWS01000003.1| GENE 72 70014 - 71855 2423 613 aa, chain + ## HITS:1 COG:ECs3950 KEGG:ns NR:ns ## COG: ECs3950 COG0568 # Protein_GI_number: 15833204 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 613 1 613 613 1033 100.0 0 MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDLAPTATH VGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGR SHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKK NFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEEETGLTIEQVKD INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH PSRSEVLRSFLDD >gi|299857061|gb|ADWS01000003.1| GENE 73 71934 - 72440 382 168 aa, chain - ## HITS:1 COG:ygjF KEGG:ns NR:ns ## COG: ygjF COG3663 # Protein_GI_number: 16130964 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Escherichia coli K12 # 1 168 1 168 168 336 100.0 1e-92 MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDRQLKPQEAQHLL DYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRG AQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELDQALVVRGR >gi|299857061|gb|ADWS01000003.1| GENE 74 72694 - 73458 726 254 aa, chain - ## HITS:1 COG:ECs3952 KEGG:ns NR:ns ## COG: ECs3952 COG2375 # Protein_GI_number: 15833206 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 517 100.0 1e-147 MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQ PDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQP GDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNA CQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY DPQRVRAAAYWHAK >gi|299857061|gb|ADWS01000003.1| GENE 75 73735 - 74358 722 207 aa, chain + ## HITS:1 COG:yqjI KEGG:ns NR:ns ## COG: yqjI COG1695 # Protein_GI_number: 16130966 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 207 1 207 207 351 100.0 5e-97 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN QSDISDAQIKKIIAVIDRAAFDITQLD >gi|299857061|gb|ADWS01000003.1| GENE 76 74512 - 76032 1508 506 aa, chain - ## HITS:1 COG:Zaer_2 KEGG:ns NR:ns ## COG: Zaer_2 COG0840 # Protein_GI_number: 15803613 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 EDL933 # 125 506 1 382 382 671 99.0 0 MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPD MPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATD EEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAML WFVAAPVVTYFLCVLVVLLASACFEWQIVRPIENVARQALKVATGERNSVEHLNRSDELG LTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDNVQQTVATMN QMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKTMDDIADSTQRIGTITSLIND IAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASADKVQS GSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTRAVDELNLITQKNAEL VEESAQVSAMVKHRASRLEDAVTVLH >gi|299857061|gb|ADWS01000003.1| GENE 77 76540 - 77829 1335 429 aa, chain + ## HITS:1 COG:ECs3955 KEGG:ns NR:ns ## COG: ECs3955 COG4992 # Protein_GI_number: 15833209 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli O157:H7 # 1 429 68 496 496 862 100.0 0 MKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGG FGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSG TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV PFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMIL DEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHT TTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGML MAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALA AMRVSVEEA >gi|299857061|gb|ADWS01000003.1| GENE 78 77871 - 78203 465 110 aa, chain - ## HITS:1 COG:ECs3956 KEGG:ns NR:ns ## COG: ECs3956 COG0073 # Protein_GI_number: 15833210 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 193 99.0 8e-50 METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGEKTLQTVTSLVPYYSEEELMG KTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERMMPAGVRVV >gi|299857061|gb|ADWS01000003.1| GENE 79 78422 - 79405 970 327 aa, chain + ## HITS:1 COG:ebgR KEGG:ns NR:ns ## COG: ebgR COG1609 # Protein_GI_number: 16130970 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 327 1 327 327 659 99.0 0 MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEKLEYKTSSARKLQTGAV NQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTNCYEHSGLPDIKNVTGILI VGKPTPALRAAACALTDNICFIDFHEPGSGYDAVDIDLARISKEIIDFYINQGVNRIGFI GGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSSSSGYELAKQMLAREDYPKALFV ASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTARFTFPPLSTVRIHSEMMGSQGVNLV YEKARDGRALPLLVFVPSKLKLRGTTR >gi|299857061|gb|ADWS01000003.1| GENE 80 79589 - 82681 3214 1030 aa, chain + ## HITS:1 COG:ECs3958 KEGG:ns NR:ns ## COG: ECs3958 COG3250 # Protein_GI_number: 15833212 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli O157:H7 # 1 1030 13 1042 1042 2180 99.0 0 MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPLSGQWNFHFFDHPLQVP EAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLS DGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRVMQW ADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRTDFDEAYCDATLSCEVVLENLAA SPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTL KDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKD LQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVESHGFANVGDISRITDDPQW EKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDA EVVDIISTMYTRVPLMNEFGEYPHPKPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGH YVWEWCDHGIQAQDDNGNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIA PVKIHALDLTRGELKVENKLWFTTLDDYTLHAEVRVEGETLATQQIKLRDVAPNSEAPLQ ITLPQLDAREAFLNITVTKDSRTRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLE DDRLSCTVRGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQ PNHLQIMQEHLRDFAVEQSDGEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSG ERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENY PFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDI TLNLDHQLLGLGSNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFF STNLHSENKQ >gi|299857061|gb|ADWS01000003.1| GENE 81 82678 - 83127 370 149 aa, chain + ## HITS:1 COG:ebgC KEGG:ns NR:ns ## COG: ebgC COG2731 # Protein_GI_number: 16130972 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli K12 # 1 149 1 149 149 287 100.0 4e-78 MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVETDSATDALFT GHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDI HEAYRFICNNAVKKVVLKVTIEDGYFHNK >gi|299857061|gb|ADWS01000003.1| GENE 82 83190 - 84623 1474 477 aa, chain + ## HITS:1 COG:ECs3960 KEGG:ns NR:ns ## COG: ECs3960 COG0531 # Protein_GI_number: 15833214 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 808 100.0 0 MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFFLATIFYFIPFCLIIAE FVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEY IMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLMLLLTLSYILLAGTALVGGVQ PADPITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIILAGIFI GVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAYFGLPEALMNRFVGLVSFTAMFGSL LMWTATPVKIFFSEIPEGIFGKKTVELNENGVPARAAWIQFLIVIPLMIIPMLGSNTVQD LMNTIINMTAAASMLPPLFIMLAYLNLRAKLDHLPRDFRMGSRRTGIIVVSMLIAIFAVG FVASTFPTGANILTIIFYNVGGIVIFLGFAWWKYSKYIKGLTAEERHIEATPASNVD >gi|299857061|gb|ADWS01000003.1| GENE 83 84757 - 85827 1035 356 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3493 NR:ns ## KEGG: EC55989_3493 # Name: ygjJ # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 356 1 356 356 697 99.0 0 MKLITAPCRALLALPFCYAFSAAGEEARPAEHDDTKTPAITSTSSPSFRFYGELGVGGYM DLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGI NRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGYVIPNTRDIMTALKVQNLSGN FRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLAEGITWMNSLEITD GTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSESGMMVSAMYEALKGVYLSTAYTYAK HRPDHADDETTSFMQFGIWYEYGGGRFATAFDSRFYMKNASHNPSDQIFLMQYFYW >gi|299857061|gb|ADWS01000003.1| GENE 84 85844 - 88195 2667 783 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3494 NR:ns ## KEGG: EC55989_3494 # Name: ygjK # Def: putative glycosyl hydrolase # Organism: E.coli_55989 # Pathway: not_defined # 1 783 1 783 783 1592 100.0 0 MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALV QKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIA GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP EQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW SVMEVYNVTQDKAWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF TVKKGNKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF RKQ >gi|299857061|gb|ADWS01000003.1| GENE 85 88521 - 90539 1762 672 aa, chain + ## HITS:1 COG:ZygjL_1 KEGG:ns NR:ns ## COG: ZygjL_1 COG1902 # Protein_GI_number: 15803622 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli O157:H7 EDL933 # 1 354 1 354 354 718 98.0 0 MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGI APDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSAL QAPINRFVPHELTHEEILQLIDDFAHCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQR SDQWGGDYRNRMRFAVEVVRTVRERVGNDFIIIYRLSMLDLVEGGGTFAETVELAQAIEA AGATIINTGIGWHEARIPTIATPVPRGAFTWVTRKLKGHVSLPLVTTNRINDPQVADDIL SRGDADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRA CHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIP GKEEFYETLRYYHRMIEVTGVTLKLNHTVTADQLQAFDETILASGIVPRVPPIDGIDHPK VLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIARFCNEWGIDSSLQQ AGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPSVSYQKI DDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARR AIAQGTRLALEI >gi|299857061|gb|ADWS01000003.1| GENE 86 90584 - 91000 317 138 aa, chain - ## HITS:1 COG:ygjM KEGG:ns NR:ns ## COG: ygjM COG5499 # Protein_GI_number: 16130977 # Func_class: K Transcription # Function: Predicted transcription regulator containing HTH domain # Organism: Escherichia coli K12 # 1 138 1 138 138 259 100.0 1e-69 MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAW EESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLE HAKKLATRFGISPALFID >gi|299857061|gb|ADWS01000003.1| GENE 87 91271 - 92407 447 378 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 13 368 18 365 371 176 33 7e-43 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE PPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG VIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNALSGVEPFRFN AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI ATNNKFVVLKTVKLGRRR >gi|299857061|gb|ADWS01000003.1| GENE 88 92492 - 92995 484 167 aa, chain + ## HITS:1 COG:ECs3967 KEGG:ns NR:ns ## COG: ECs3967 COG1451 # Protein_GI_number: 15833221 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 1 167 13 179 179 333 98.0 1e-91 MNNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATDKALWQYTQDLKNQFLR NAPPINKVMYDNKIHVLKNALGLHSAVSRVQGGKLKAKAEIRVATVFRNAPEPFLRMIVV HELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQLSLGQDKI >gi|299857061|gb|ADWS01000003.1| GENE 89 93072 - 93755 522 227 aa, chain + ## HITS:1 COG:ygjQ KEGG:ns NR:ns ## COG: ygjQ COG2949 # Protein_GI_number: 16130981 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli K12 # 4 227 7 230 230 452 96.0 1e-127 MQPRLLLRICFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPERNVGLL LGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVI FCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYSIDTIGFNAPDLNMKH GFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAKE >gi|299857061|gb|ADWS01000003.1| GENE 90 93816 - 94820 807 334 aa, chain + ## HITS:1 COG:ygjR KEGG:ns NR:ns ## COG: ygjR COG0673 # Protein_GI_number: 16130982 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 334 1 334 334 658 98.0 0 MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTS LEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQ VVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPSFSN GSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS VLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHL VDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL >gi|299857061|gb|ADWS01000003.1| GENE 91 95103 - 96068 1218 321 aa, chain + ## HITS:1 COG:ECs3970 KEGG:ns NR:ns ## COG: ECs3970 COG0861 # Protein_GI_number: 15833224 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 550 99.0 1e-156 MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAWSLVWVTLSLLFNAAFW WYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVL GAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGH LRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTS NLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFIGIKMLIVDFYHIPIAVSLGVVFGI LVMTFIINAWVNYRHDKQRGG >gi|299857061|gb|ADWS01000003.1| GENE 92 96468 - 97712 1398 414 aa, chain + ## HITS:1 COG:ECs3971 KEGG:ns NR:ns ## COG: ECs3971 COG3633 # Protein_GI_number: 15833225 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Escherichia coli O157:H7 # 1 414 1 414 414 696 99.0 0 MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFVGALKAVAPI LVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSSAVDIS PPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLGFALRHGNETTKNLVNDMSNA VTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLVVLVGCMLLVALVVNPLLVWW KIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINM AGAAITITVLTLAAVNTLGIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFG ISNDIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQAEDDRLANSALRN >gi|299857061|gb|ADWS01000003.1| GENE 93 97717 - 98268 249 183 aa, chain - ## HITS:1 COG:no KEGG:SSON_3243 NR:ns ## KEGG: SSON_3243 # Name: ygjV # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 183 1 183 183 353 100.0 2e-96 MTAYWLAQGVGVIAFLIGITTFFNRDERRFKKQLSVYSAVIGVHFFLLGTYPAGASAILN AIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIGTIVSTWALFRCKGLTMRC VMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFWRMQKRGIDPFKVEKTPPAVD ERG >gi|299857061|gb|ADWS01000003.1| GENE 94 98351 - 99838 1607 495 aa, chain - ## HITS:1 COG:uxaA KEGG:ns NR:ns ## COG: uxaA COG2721 # Protein_GI_number: 16130986 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Escherichia coli K12 # 1 495 1 495 495 1019 99.0 0 MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKFALTDIAKGANVIKYGL PIGYALADIAAGEHVHAHNTRTNLSDLDQYRYQPDFQDLPAQAADREVQIYRRANGDVGV RNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLFSHTYGCSQLGDDHINTRTML QNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPERVHFMICQQQDDEIEAGIEHLHQ LYNVMRNDKREPGKLSELKFGLECGGSDGLSGITANPMLGRFSDYVIANGGTTVLTEVPE MFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIAHDQPIYENPSPGNKAGGITTLEDKSL GCTQKAGSSVVVDVLRYGERLKTPGLNLLSAPGNDAVATSALAGAGCHMVLFSTGRGTPY GGFVPTVKIATNSELAAKKKHWIDFDAGQLIHGKVMPQLLEEFIDTIVEFANGKQTCNER NDFRELAIFKSGVTL >gi|299857061|gb|ADWS01000003.1| GENE 95 99853 - 101265 1747 470 aa, chain - ## HITS:1 COG:uxaC KEGG:ns NR:ns ## COG: uxaC COG1904 # Protein_GI_number: 16130987 # Func_class: G Carbohydrate transport and metabolism # Function: Glucuronate isomerase # Organism: Escherichia coli K12 # 1 470 1 470 470 991 99.0 0 MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAEDYRFKNLYDIWLKGDHY KWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLS PSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDPIDSLEHHAEIAKDGSFTIKV LPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADLQTALTKRLDHFAAHGCKVSDHA LDVVMFAEANEAELDSILARRLAGEPLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGA LRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLLSKQNEENLLPKTILYCLNPRDNEVLG TMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQLGLLSRFVGMLTDSRSFLSYT RHEYFRRILCQMIGRWVEAGEAPADINLLGEMVKNICFNNARDYFAIELN >gi|299857061|gb|ADWS01000003.1| GENE 96 101748 - 103046 1701 432 aa, chain + ## HITS:1 COG:ECs3975 KEGG:ns NR:ns ## COG: ECs3975 COG0477 # Protein_GI_number: 15833229 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 432 41 472 472 786 99.0 0 MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTV MQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLAIARGAVGAAEAAMIPAGL KASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMAFIISGALSFIWAMA WLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKMSVGQILRNRQFWGIALPRFLAE PAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLIV SRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEVA TANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVFDLLGALVIWTVLQNKPAIEV AQETHNNPAPQH >gi|299857061|gb|ADWS01000003.1| GENE 97 103134 - 104222 521 362 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3839 NR:ns ## KEGG: ECO103_3839 # Name: not_defined # Def: putative minor pilin and initiator protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 362 1 362 362 758 100.0 0 MRNRLIAAILGLFGTLTGVQAAPDVTSEITYDLASGRADYYFWKDEASAGNNGYMWYECS YPDLQQTCTANGNISTVQIYLTEQRSGMRWPVKLKGFKTAIVSSDEAPPGCKGGKGLQTN LKDSNRSSCTEDGQHYYIYDTKFLTLYLEQTEMKNLPIGGVWKGKVKLHSNSPAQDYFAN ITLNTLDPNHIDVFFPEFAHATPRVQLDLHPTGSVNGSNYAQDLTMLDMCLYDGFNGNAI SYEIMLKDEGRPAAGRRDGYFSIYRQGGTTTDEGERIDYRVKMYNPETGGQIDVRNNENM VWNSINLKRVRPVVLPGIRYAVMCVPTPLTLAVDKFSVMDKQAGYYMGKLSVIFTPSLPT IN >gi|299857061|gb|ADWS01000003.1| GENE 98 104219 - 106921 1644 900 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3509 NR:ns ## KEGG: EC55989_3509 # Name: not_defined # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_55989 # Pathway: not_defined # 1 900 1 900 900 1684 99.0 0 MDFRIAMDKKLLALLILASLSPAEATLTKIPAGFEVIAQGQQEYIEVYFSGKSLGKYYAM VNLDTVTFLDPASLYNKLELDVDDQKIAHIVKEKLSQPLARHGELACGYVRTDSGCGFLN TDTLEIIYNDEESSATLFINPQWNSAFDAKSLYLNPDKNTVNAFIHQQDINVLAQDDYQS LSIQGNGALGITENSYIGAHWNFNGYDADDVSDSNADVSDLYYRYDFLRRYYVQAGRMDN RTLFNAQGGNFTFNFLPLGAIDGMRIGSTLSYLNQAQSQQGTPVMVLLSRNSRVDAYRNE QLLGSFYLNSGSQFIDTSSFPPGSYSVALKVYENNQLTRTELVPFTKTGGLTDGNAQWFL QAGKTTSQVSDDESSAYQLGVRLPLHPQYELYAGLANADDVSAFELGNNWTADLGGVGNL AISASVFRNDDGGKGDMQQANWSNPGWPTLGFYRTNSDGDACTTDSRESYNALSCYESIS ATVSQNFVGWNMMLGYTRTQNNTDDSLRWDKQQSFENNYLRQTTAQSISETVQLSASRAF VMRDWILSTSVGVFHRNDNGGDNDDNGLYLSFSLSDTPAMDSNNNSHSTNVSTDYRYSEQ DGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQYGNVYATVSDSYDR KNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQDEESQDLQLEAR VAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTNIINGAGNRELMLLPGKLR YREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAEDGGFTLEINGSEKELYLLSGQ QFLKCPLSVVKKRASIRYSGDVTCSVVTYSQLPESIQVQAQLKQPKLRGNVQTAQREVAP >gi|299857061|gb|ADWS01000003.1| GENE 99 106995 - 107495 628 166 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3841 NR:ns ## KEGG: ECO103_3841 # Name: not_defined # Def: putative fimbrial subunit # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 166 1 166 166 259 100.0 3e-68 MKKVFAKSLLVAAMFSVAGSALAVQKDITVTANVDAALDMTQTDNTALPKAVEMQYLPGQ GLQSYQLMTKIWSNDVTKDVKMQLVSPAQLVQSLDASKIVPLTVTWGGEEIKADAATTFT ATKIFASDALTNGSLAKNLMFAQTTKGVLETGIYRGVVSIYLSQDI >gi|299857061|gb|ADWS01000003.1| GENE 100 107525 - 108163 385 212 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3511 NR:ns ## KEGG: EC55989_3511 # Name: not_defined # Def: putative fimbrial protein # Organism: E.coli_55989 # Pathway: not_defined # 1 212 27 238 238 395 100.0 1e-109 MTVYPMAVSINSQGEGNVRVISKSNEVQYIKATVFRIDNPSTPQENEVEIKSGDANHLVV MPPKFALPAGSSKTVRFVAMEPEQKEKNYRVKFEAVPSIDDVATDKKDLSMQLTVNLIWG IVVSVPPQQPIAKLEVNAAQKLVNAGNQRLKILTIAYCKNNSKENCKIQTVNKNIFPGQE RNLESISGYDKIVVKYNNWITKDNGEFELAVH >gi|299857061|gb|ADWS01000003.1| GENE 101 108537 - 109313 947 258 aa, chain + ## HITS:1 COG:ECs3976 KEGG:ns NR:ns ## COG: ECs3976 COG2186 # Protein_GI_number: 15833230 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 258 6 263 263 498 100.0 1e-141 MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEG YVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQLIESNIAEFAATQVTKQD IMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALAAIVEKMWTQRSHNPYWKKLH EHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHLENTKIMLFNETSDDFEFNADRY LFAENPVVHLDTATSGSK >gi|299857061|gb|ADWS01000003.1| GENE 102 109658 - 110320 514 220 aa, chain + ## HITS:1 COG:STM3226 KEGG:ns NR:ns ## COG: STM3226 COG0586 # Protein_GI_number: 16766525 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 220 1 220 220 372 95.0 1e-103 MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLPAAFLPGDSLLVLVGVL IAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNWLSHLPAHYHQRAHHLFHK HGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMSGLLWVLILTTLGYMLGKTPV FLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGNRG >gi|299857061|gb|ADWS01000003.1| GENE 103 110339 - 110707 263 122 aa, chain + ## HITS:1 COG:no KEGG:JW3067 NR:ns ## KEGG: JW3067 # Name: yqjB # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 122 6 127 127 208 99.0 6e-53 MSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIP FKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHR FG >gi|299857061|gb|ADWS01000003.1| GENE 104 110839 - 111222 481 127 aa, chain + ## HITS:1 COG:no KEGG:SSON_3256 NR:ns ## KEGG: SSON_3256 # Name: yqjC # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 127 1 127 127 162 100.0 4e-39 MEGSRMKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQNRIDGLNKALS EVRANCSDSQLRADHHKKIAKQKDEVAERQQDLAEAKQKGDADKIAKRERKLAEAQEELK KLEARDY >gi|299857061|gb|ADWS01000003.1| GENE 105 111260 - 111565 461 101 aa, chain + ## HITS:1 COG:ECs3980 KEGG:ns NR:ns ## COG: ECs3980 COG4575 # Protein_GI_number: 15833234 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 101 1 101 101 150 100.0 4e-37 MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDA IAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR >gi|299857061|gb|ADWS01000003.1| GENE 106 111568 - 111972 431 134 aa, chain + ## HITS:1 COG:STM3230 KEGG:ns NR:ns ## COG: STM3230 COG5393 # Protein_GI_number: 16766529 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 130 1 130 132 198 89.0 2e-51 MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLF AAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHEL ANDRQLLEEESREQ >gi|299857061|gb|ADWS01000003.1| GENE 107 111962 - 112261 377 99 aa, chain + ## HITS:1 COG:no KEGG:ECSP_4074 NR:ns ## KEGG: ECSP_4074 # Name: yqjK # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 99 1 99 99 140 100.0 1e-32 MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWNMLLSLRSWALVGSSVM AIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG >gi|299857061|gb|ADWS01000003.1| GENE 108 112447 - 112839 455 130 aa, chain + ## HITS:1 COG:ECs3983 KEGG:ns NR:ns ## COG: ECs3983 COG2259 # Protein_GI_number: 15833237 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 130 31 160 160 220 98.0 6e-58 MKKLEDVGVLVARILMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLPLVILLEFGGGL AILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAY SIDRLLNKKW >gi|299857061|gb|ADWS01000003.1| GENE 109 112909 - 113895 1064 328 aa, chain + ## HITS:1 COG:yqjG KEGG:ns NR:ns ## COG: yqjG COG0435 # Protein_GI_number: 16130997 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Escherichia coli K12 # 1 328 1 328 328 658 99.0 0 MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVS LACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLYQLY LHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKID ELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADI RLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSH KTINPTGIISIGPWQDLDEPHGRDVRFG >gi|299857061|gb|ADWS01000003.1| GENE 110 114188 - 114553 326 121 aa, chain + ## HITS:1 COG:ECs3985 KEGG:ns NR:ns ## COG: ECs3985 COG3152 # Protein_GI_number: 15833239 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 121 1 121 121 223 100.0 5e-59 MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYG ILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLE P >gi|299857061|gb|ADWS01000003.1| GENE 111 114795 - 115151 400 118 aa, chain + ## HITS:1 COG:ECs3986 KEGG:ns NR:ns ## COG: ECs3986 COG3152 # Protein_GI_number: 15833240 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 118 1 118 118 197 84.0 3e-51 MQWYLAVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLEFPFLSLIYLAATI IPVIALCVRRLHDTDRSGAWALLYLVPIIGWLVLFVFACLEGNSGSNRYGNDPKFGSN >gi|299857061|gb|ADWS01000003.1| GENE 112 115202 - 116098 973 298 aa, chain - ## HITS:1 COG:ECs3987 KEGG:ns NR:ns ## COG: ECs3987 COG0583 # Protein_GI_number: 15833241 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 298 1 298 298 550 99.0 1e-156 MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHR TKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLA AKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDH PIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLG VATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK >gi|299857061|gb|ADWS01000003.1| GENE 113 116203 - 116904 609 233 aa, chain + ## HITS:1 COG:yhaK KEGG:ns NR:ns ## COG: yhaK COG1741 # Protein_GI_number: 16131001 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Escherichia coli K12 # 1 233 1 233 233 473 99.0 1e-133 MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYP KVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLD ACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVWLHHIVLDKGESANFQLHGPR AYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV >gi|299857061|gb|ADWS01000003.1| GENE 114 116927 - 117091 205 54 aa, chain + ## HITS:1 COG:no KEGG:G2583_3831 NR:ns ## KEGG: G2583_3831 # Name: yhaL # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 54 3 56 56 62 100.0 5e-09 MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA >gi|299857061|gb|ADWS01000003.1| GENE 115 117303 - 118613 1216 436 aa, chain - ## HITS:1 COG:yhaN+M KEGG:ns NR:ns ## COG: yhaN+M COG3681 # Protein_GI_number: 16132252 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 436 1 436 436 749 99.0 0 MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLM KNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKI QEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTQQACVAEGEQESPLTV LSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLL AKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLAR ALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSG MICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSM QQTDRQIIEIMASKAR >gi|299857061|gb|ADWS01000003.1| GENE 116 118641 - 119972 1290 443 aa, chain - ## HITS:1 COG:ECs3991 KEGG:ns NR:ns ## COG: ECs3991 COG0814 # Protein_GI_number: 15833245 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 443 1 443 443 788 99.0 0 MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQV GLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYF VMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKI STGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSP MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISA LAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKI NENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYK GMSLYLIIVTGLLLCVSPFLAFS >gi|299857061|gb|ADWS01000003.1| GENE 117 120247 - 121611 1151 454 aa, chain - ## HITS:1 COG:ECs3992 KEGG:ns NR:ns ## COG: ECs3992 COG1760 # Protein_GI_number: 15833246 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli O157:H7 # 1 454 1 454 454 896 98.0 0 MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGH ATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHLEML PRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKM CDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRA VALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYY DKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGG SPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVS LDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG >gi|299857061|gb|ADWS01000003.1| GENE 118 121683 - 122072 438 129 aa, chain - ## HITS:1 COG:tdcF KEGG:ns NR:ns ## COG: tdcF COG0251 # Protein_GI_number: 16131006 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 129 22 150 150 249 100.0 1e-66 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAI VVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLE IEAIAVRSA >gi|299857061|gb|ADWS01000003.1| GENE 119 122086 - 124380 2622 764 aa, chain - ## HITS:1 COG:ECs3994 KEGG:ns NR:ns ## COG: ECs3994 COG1882 # Protein_GI_number: 15833248 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli O157:H7 # 1 764 1 764 764 1582 99.0 0 MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGDESFLAEATPATTELWE KVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGI NMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRG RIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDLEATIRLREELAEHRHALLQIQE MAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGV LNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFR YLHTLHTMGPAPEPNLTILWSEELPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYA IACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKV MDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDS LSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYR NAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLP FTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREML LDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL >gi|299857061|gb|ADWS01000003.1| GENE 120 124414 - 125622 1075 402 aa, chain - ## HITS:1 COG:tdcD KEGG:ns NR:ns ## COG: tdcD COG0282 # Protein_GI_number: 16131008 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Escherichia coli K12 # 1 402 5 406 406 789 99.0 0 MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSY EGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNY ANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHR YVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDV DFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTF VHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGVEIDTEMNNRSNSC GERIVSSENARVICAVIPTNEEKMIALDAIHLGKVNAPAEFA >gi|299857061|gb|ADWS01000003.1| GENE 121 125648 - 126979 1394 443 aa, chain - ## HITS:1 COG:ECs3996 KEGG:ns NR:ns ## COG: ECs3996 COG0814 # Protein_GI_number: 15833250 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 443 1 443 443 794 99.0 0 MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAY PIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTIT NTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISL SLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYE KDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANH FASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSL GKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRG RLDNVFVTVIGLLTILNIVYKLF >gi|299857061|gb|ADWS01000003.1| GENE 122 127001 - 127990 907 329 aa, chain - ## HITS:1 COG:ECs3997 KEGG:ns NR:ns ## COG: ECs3997 COG1171 # Protein_GI_number: 15833251 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 590 100.0 1e-169 MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIR GAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDY SAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVI VPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDV SRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQY IQNRKTVSIISGGNIDLSRVSQITGFVDA >gi|299857061|gb|ADWS01000003.1| GENE 123 128089 - 129027 653 312 aa, chain - ## HITS:1 COG:ECs3998 KEGG:ns NR:ns ## COG: ECs3998 COG0583 # Protein_GI_number: 15833252 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 593 100.0 1e-169 MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTG VTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFK EVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKS RTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNA DFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSY NGCRRRQLIEVG >gi|299857061|gb|ADWS01000003.1| GENE 124 129816 - 130355 59 179 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_3417 NR:ns ## KEGG: EcSMS35_3417 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 179 1 179 179 360 98.0 2e-98 MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTNDVNKIYSISNELRRVL SAITALNFYQGDVPSVMIRIQPENMSPFIIDISTGEHDDYIIQTLDVGTFAPFGEQCTCS AVNKKELECIKETISKYCAKFTRKEAILTPPAHFNKTSITSDCWQILFFSPDHFNNYFY >gi|299857061|gb|ADWS01000003.1| GENE 125 130377 - 131564 201 395 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3868 NR:ns ## KEGG: ECO103_3868 # Name: yhaC # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 395 1 395 395 705 100.0 0 MFPVSSIGNDISSDLVRRKMNDLPESPIVNNLEALAPGIEKLKQTSIQMVTLLNALQPGG KCIITGDFQKELAYLQNVIIYNDSSLRMDFFGYNALIIQRSDNTCELTINEPLKNQEIST GNINVNFPLKDIYNEIRRLNLVFSCGTGGIVDLSSLDLRNIDLELYDFTDKHMANAILNP FKLDDTDFTNANMFQVNFVSSKQNTTISWDYLLKITPVLTSISDMYSEEKIKLVESCLNE LGDITEEQLKIMRFAIIKSIPRATLTDKLENELTKEIYKSSSKINNCLNRIKLPEMIDFS SEKIHDYIDIIIEDYENIKENAYLVIPQINYTMDLNIEDSSSEELLSDNTLEKDENSPDN GFEVGEYNTYEAYNSENQYFTREDYTYNYDLLNAI >gi|299857061|gb|ADWS01000003.1| GENE 126 132368 - 133513 1044 381 aa, chain - ## HITS:1 COG:ECs4002 KEGG:ns NR:ns ## COG: ECs4002 COG1929 # Protein_GI_number: 15833256 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Escherichia coli O157:H7 # 1 381 28 408 408 674 99.0 0 MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSIPVADGGEGTVEAMIAATQGSE RHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAEKRDPLVTTSRGTGELILQ ALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNEIGFGGGSLNTLNDIDISGLD PRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAMIVELDNNLSHYAEVIKKALHVD VKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTALNLEEHIHDCTLVITGEGRIDSQSI HGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVHQHGIDAVFSVLTSIGTLDEAFRGAYD NICRASRNIAATLAIGMRNAG >gi|299857061|gb|ADWS01000003.1| GENE 127 133610 - 134500 1188 296 aa, chain - ## HITS:1 COG:ECs4003 KEGG:ns NR:ns ## COG: ECs4003 COG2084 # Protein_GI_number: 15833257 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 296 4 299 299 513 100.0 1e-145 MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCD VIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDA PVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVA LNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIK DLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEKLAKVEVTR >gi|299857061|gb|ADWS01000003.1| GENE 128 134530 - 135300 852 256 aa, chain - ## HITS:1 COG:ECs4004 KEGG:ns NR:ns ## COG: ECs4004 COG3836 # Protein_GI_number: 15833258 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 504 100.0 1e-143 MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIP QLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAEQAVASTRYPPEGI RGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDL AAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDL GVFRSATQKLADTFKK >gi|299857061|gb|ADWS01000003.1| GENE 129 135316 - 136650 1583 444 aa, chain - ## HITS:1 COG:ECs4005 KEGG:ns NR:ns ## COG: ECs4005 COG0477 # Protein_GI_number: 15833259 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 828 100.0 0 MILDTVDEKKKGVHTRYLILLIIFIVTAVNYADRATLSIAGTEVAKELQLSAVSMGYIFS AFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISMFFMRF MLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAWGWEHV FTVMGVIGFVLTALWIKLIHNPTDHPRMSAEELKFISENGAVVDMDHKKPGSAAASGPKL HYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPALCGF AGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLLASTIILCNYTNNTTLVVMLMALAFFG KGFGALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNAALVFVG CSALMAMVCYLFVVGDIKRMELQK >gi|299857061|gb|ADWS01000003.1| GENE 130 137025 - 138596 1331 523 aa, chain + ## HITS:1 COG:yhaG KEGG:ns NR:ns ## COG: yhaG COG2721 # Protein_GI_number: 16131020 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Escherichia coli K12 # 1 523 1 523 523 1054 99.0 0 MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDI PANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPAPLPPLEGYTF EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG VAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLVGTDDVQAIPVESASI VSLQDEKHVGFQSMVEDILQVAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGK TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE TIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT >gi|299857061|gb|ADWS01000003.1| GENE 131 138745 - 139080 291 111 aa, chain + ## HITS:1 COG:sohA KEGG:ns NR:ns ## COG: sohA COG2002 # Protein_GI_number: 16131021 # Func_class: K Transcription # Function: Regulators of stationary/sporulation gene expression # Organism: Escherichia coli K12 # 1 111 1 111 111 216 100.0 8e-57 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE >gi|299857061|gb|ADWS01000003.1| GENE 132 139242 - 139544 193 100 aa, chain + ## HITS:1 COG:no KEGG:EcolC_0570 NR:ns ## KEGG: EcolC_0570 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ATCC8739 # Pathway: not_defined # 1 100 55 154 154 201 99.0 1e-50 MIEEHITVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDE NTLRTYGKKTDAYTVFSKMLKRGHPPADWESLTQETEENH >gi|299857061|gb|ADWS01000003.1| GENE 133 139599 - 140408 743 269 aa, chain - ## HITS:1 COG:ECs4009 KEGG:ns NR:ns ## COG: ECs4009 COG1349 # Protein_GI_number: 15833263 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 492 100.0 1e-139 MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGI AVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPGHRVILDSGTTTFE IARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHF DMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRI DMIIVDEGIPADSLEGLRKAGVEVILVGE >gi|299857061|gb|ADWS01000003.1| GENE 134 140657 - 141937 1267 426 aa, chain + ## HITS:1 COG:agaZ KEGG:ns NR:ns ## COG: agaZ COG4573 # Protein_GI_number: 16131024 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Escherichia coli K12 # 1 426 1 426 426 860 99.0 0 MKHLTEMVRQHKAGKTNGIYAVCSAHPLVLEAAIRYASANQTPLLIEATSNQVDQFGGYT GMTPADFRGFVCQLADSLNFPQDALILGGDHLGPNRWQNLPAAQAMANADDLIKSYVAAG FKKIHLDCSMSCQDDPIPLTDDIVAERAARLAKVAEETCREHFGEADLEYVIGTEVPVPG GAHETLSELAVTTPDAARATLEAHRHAFEKQGLNAIWPRIIALVVQPGVEFDHTNVIDYQ PAKASALSQMVENYETLIFEAHSTDYQTPQSLRQLVIDHFAILKVGPALTFALREALFSL AAIEEELVPAKACSGLRQVLEDVMLDRPEYWQSHYHGDGNARRLARGYSYSDRVRYYWPD SQIDDAFAHLVRNLADSPIPLPLISQYLPLQYVKVRSGELQPTPRELIINHIQDILAQYH TACEGQ >gi|299857061|gb|ADWS01000003.1| GENE 135 141960 - 142433 557 157 aa, chain + ## HITS:1 COG:ZagaV KEGG:ns NR:ns ## COG: ZagaV COG3444 # Protein_GI_number: 15803671 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 EDL933 # 1 157 13 169 169 305 99.0 2e-83 MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLMEMVLAEGIAVRF WTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTV SVDAGDIAAFNDLKAAGVECFVQGVPTEPAVDLFKLL >gi|299857061|gb|ADWS01000003.1| GENE 136 142444 - 143223 1109 259 aa, chain + ## HITS:1 COG:ECs4012 KEGG:ns NR:ns ## COG: ECs4012 COG3715 # Protein_GI_number: 15833266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 429 100.0 1e-120 MEISLLQAFALGIIAFIAGLDMFNGLTHMHRPVVLGPLVGLVLGDLHTGILTGGTLELVW MGLAPLAGAQPPNVIIGTIVGTAFAITTGVKPDVAVGVAVPFAVAVQMGITFLFSVMSGV MSRCDRMAENADTRGIERVNYLALLALGTFYFLCAFLPIYFGAEHAKTIIDVLPQRLIDG LGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAWLKLPVLAIAAAALAMALIDLLR KSPEPTQPAAQKEEFEDGI >gi|299857061|gb|ADWS01000003.1| GENE 137 143213 - 144091 981 292 aa, chain + ## HITS:1 COG:ECs4013 KEGG:ns NR:ns ## COG: ECs4013 COG3716 # Protein_GI_number: 15833267 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 561 100.0 1e-160 MASNQTTLPNVSENEETLLTGVNENVYEDQSIGAELTKKDINRVAWRSMLLQASFNYERM QASGWLYGLLPALKKIHTNKRDLARAMKGHMGFFNTHPFLVTFVIGIILAMERSKQDVNS IQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGSILGAVVFIVLFNVVHLGLRF GLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGALVATYVRLSTTLEITAGDAVVK LQADVIDKLMPAFLPLVYTLTMFWLVRRGWSPLRLIAVTVVLGIVGKFCHFL >gi|299857061|gb|ADWS01000003.1| GENE 138 144109 - 144543 600 144 aa, chain + ## HITS:1 COG:ECs4014 KEGG:ns NR:ns ## COG: ECs4014 COG2893 # Protein_GI_number: 15833268 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 144 1 144 144 256 100.0 1e-68 MLSIILTGHGGFASGMEKAMKQILGEQSQFIAIDFPETSSTALLTSQLEEAIAQLDCEDG IVFLTDLLGGTPFRVASTLAMQKPGCEVITGTNLQLLLEMVLEREGLSGEEFRVQALECG HRGLTSLVDELGRCHEECPVEEGI >gi|299857061|gb|ADWS01000003.1| GENE 139 144540 - 145673 1027 377 aa, chain + ## HITS:1 COG:ECs4015 KEGG:ns NR:ns ## COG: ECs4015 COG1820 # Protein_GI_number: 15833269 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Escherichia coli O157:H7 # 1 377 8 384 384 724 98.0 0 MTHVLRARRLLTEEGWLDDHQLRIADGVIAAIEPIPVGVTERDAELLCPAYIDTHVHGGA GVDVMDDAPDVLDKLAMHKAREGVGSWLPTTVTAPLNTIHAALKRIAQRCQRGGPGAQVL GSYLEGPYFTPQNKGAHPPELFRELEIAELDQLIAVSQHTLRVVALAPEKEGALQAIRHL KQQNVRVMLGHSAATWQQTRAAFDAGADGLVHCYNGMTGLHHREPGMVGAGLTDKRAWLE LIADGHHVHPAAMSLCCCCAKERIVLITDAMQAAGMPDGRYTLCGEEVQMHGGVVRTASG GLAGSTLSVDAAVRNMVELTGVTPAEAIHMASLHPARMLGVDGVLGSLKPGKRASIVALD SGLHVQQIWIQSQLASF >gi|299857061|gb|ADWS01000003.1| GENE 140 146024 - 147178 961 384 aa, chain + ## HITS:1 COG:agaS KEGG:ns NR:ns ## COG: agaS COG2222 # Protein_GI_number: 16131028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Escherichia coli K12 # 1 384 1 384 384 769 99.0 0 MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTG AGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESV AAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMM ASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAAR ESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDNETLVVVFVSSHPYTRQYDLDLLAELR RDNQAMRVIAIAAESTDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNT PDTPSASGTVNRVVQGVIIHPWQA >gi|299857061|gb|ADWS01000003.1| GENE 141 147191 - 148051 860 286 aa, chain + ## HITS:1 COG:ECs4017 KEGG:ns NR:ns ## COG: ECs4017 COG0191 # Protein_GI_number: 15833271 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 577 100.0 1e-165 MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALE EIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSV VDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAH GLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFA GAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRISA >gi|299857061|gb|ADWS01000003.1| GENE 142 148217 - 148693 573 158 aa, chain + ## HITS:1 COG:ECs4018 KEGG:ns NR:ns ## COG: ECs4018 COG3444 # Protein_GI_number: 15833272 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 279 98.0 1e-75 MSSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFG IRFFTIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDLKDINVGNMHFSEGKKQIS SKVYVDDQDLADLRFIKQRGVNVFIQDVPGDQKEQIPD >gi|299857061|gb|ADWS01000003.1| GENE 143 148732 - 149535 825 267 aa, chain + ## HITS:1 COG:agaC KEGG:ns NR:ns ## COG: agaC COG3715 # Protein_GI_number: 16131031 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli K12 # 1 267 1 267 267 479 100.0 1e-135 MHEITLLQGLSLAALVFVLGIDFWLEALFLFRPIIVCTLTGAILGDIQTGLITGGLTELA FAGLTPAGGVQPPNPIMAGLMTTVIAWSTGVDAKTAIGLGLPFSLLMQYVILFFYSAFSL FMTKADKCAKEADTAAFSRLNWTTMLIVASAYAVIAFLCTYLAQGAMQALVKAMPAWLTH GFEVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVCYIQVSNLLPVAVLGAGFAVYEF FNAKSRQQAQPQPVASKNEEEDYSNGI >gi|299857061|gb|ADWS01000003.1| GENE 144 149525 - 150316 812 263 aa, chain + ## HITS:1 COG:ECs4019 KEGG:ns NR:ns ## COG: ECs4019 COG3716 # Protein_GI_number: 15833273 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 504 100.0 1e-143 MGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKKIYKDDKPGLSAAMKDN LEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPIAGIGDAIFWFTLLPIMAG ICSSFASQGNLLGPILFFAVYLLIFFLRVGWTHVGYSVGVKAIDKVRENSQMIARSATIL GITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFDKVFPNILPMAYTLLMYYFLRVKK AHPVLLIGVTFVLSIVCSAFGIL >gi|299857061|gb|ADWS01000003.1| GENE 145 150371 - 151072 619 233 aa, chain + ## HITS:1 COG:agaI KEGG:ns NR:ns ## COG: agaI COG0363 # Protein_GI_number: 16131033 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli K12 # 1 233 19 251 251 453 97.0 1e-127 MQTLQQVENYTALSERASEYLLAVIRSKPDAVICLATGATPLLTYHYLVEKIHQQQVDIS QLTFVKLDEWVDLPLTMPGTCETFLQQHIVQPLGLREDQLISFRSEEINETECERVTNLI ARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQLDARTQQHEMLKTTGRPVTRGITL GLKDILNAREVLLLVTGEGKQDATERFLTAKVSTAIPASFLWLHSNFICLINT >gi|299857061|gb|ADWS01000003.1| GENE 146 151472 - 152056 498 194 aa, chain + ## HITS:1 COG:ECs4020 KEGG:ns NR:ns ## COG: ECs4020 COG3539 # Protein_GI_number: 15833274 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 194 1 194 194 368 98.0 1e-102 MNKVTKTAIVGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFR SVGDRSPKIPFTIPLVNCPVTGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAG TAATGVGIRIDDAESGNLMPLNAMGNDNTVYQIPADSNGIVNVDLIAYYVSTVEASEITP GEADAVVNVTLDYR >gi|299857061|gb|ADWS01000003.1| GENE 147 152136 - 152831 262 231 aa, chain + ## HITS:1 COG:yraI KEGG:ns NR:ns ## COG: yraI COG3121 # Protein_GI_number: 16131035 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 231 1 231 231 465 98.0 1e-131 MSKRTFAVIITLLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSW VDNIDGTSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSD DVNANELTLVFKTRIKMFYRPAHLKGRVNDAWTSLEFKRSDHSLNIYNPTEYYVVFAGLA VDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPLQ >gi|299857061|gb|ADWS01000003.1| GENE 148 152861 - 153184 112 107 aa, chain + ## HITS:1 COG:ECs4022 KEGG:ns NR:ns ## COG: ECs4022 COG3188 # Protein_GI_number: 15833276 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 107 1 112 838 197 84.0 3e-51 MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIMLETTKSGMQTT DLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKLHLPPMQSNFCSHSLR >gi|299857061|gb|ADWS01000003.1| GENE 149 153211 - 155376 1465 721 aa, chain + ## HITS:1 COG:ECs4022 KEGG:ns NR:ns ## COG: ECs4022 COG3188 # Protein_GI_number: 15833276 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 721 118 838 838 1343 99.0 0 MDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQIALYRDARGYVSPSRWD DGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQTSSWNT ISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIA NSSAIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSL PMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYALG IGIGGTLGALGALSMDINRADTQFDNRHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTND GYFSFDEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGV SGQQWGIGYSLNYQYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEM RLDGSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTG GVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLS VDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASND ETGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQC H >gi|299857061|gb|ADWS01000003.1| GENE 150 155387 - 156478 442 363 aa, chain + ## HITS:1 COG:yraK KEGG:ns NR:ns ## COG: yraK COG3539 # Protein_GI_number: 16131037 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 363 1 363 363 664 98.0 0 MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSAT LSSTNWQYACTCSAGKAVKLVYMVSPVLTTTGHQAGYYKLNDSLDIKTTLQANDIPGLVT DQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTI PKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNAP DVGIRIENLGGGVANIPFQNGILPVDPSGHGTINMRAWPVNLVGGELETGKFQGTATITV IVR >gi|299857061|gb|ADWS01000003.1| GENE 151 156521 - 157381 1036 286 aa, chain - ## HITS:1 COG:ECs4027 KEGG:ns NR:ns ## COG: ECs4027 COG0313 # Protein_GI_number: 15833281 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 530 99.0 1e-150 MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINA RLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGICVVPLP GPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLE DIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIIEGHKAQEE DLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG >gi|299857061|gb|ADWS01000003.1| GENE 152 157445 - 159481 1889 678 aa, chain + ## HITS:1 COG:ECs4028 KEGG:ns NR:ns ## COG: ECs4028 COG3107 # Protein_GI_number: 15833282 # Func_class: R General function prediction only # Function: Putative lipoprotein # Organism: Escherichia coli O157:H7 # 1 678 1 678 678 1192 99.0 0 MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDD TRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKTLLAVEIKLAQKDFAGAQN LLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQA LSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPA ADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKI YDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNIC YFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG STSELRAGVNGGSGIALTGSPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYI VATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGN LPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVI NRKLSWLQYQQGQVVPAS >gi|299857061|gb|ADWS01000003.1| GENE 153 159439 - 159834 231 131 aa, chain + ## HITS:1 COG:ECs4029 KEGG:ns NR:ns ## COG: ECs4029 COG0792 # Protein_GI_number: 15833283 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 247 99.0 5e-66 MATVPTRSGSPRQLTTKQTGDAWEVQARRWLEGKGLRFVAANVNERGGEIDLIMREGRTT VFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEV EWIKDAFNDHS >gi|299857061|gb|ADWS01000003.1| GENE 154 159854 - 160444 470 196 aa, chain + ## HITS:1 COG:ECs4030 KEGG:ns NR:ns ## COG: ECs4030 COG0279 # Protein_GI_number: 15833284 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 370 100.0 1e-103 MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFA ASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRG NSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVN CLCDLIDNTLFPHQDD >gi|299857061|gb|ADWS01000003.1| GENE 155 160454 - 161029 568 191 aa, chain + ## HITS:1 COG:ECs4031 KEGG:ns NR:ns ## COG: ECs4031 COG2823 # Protein_GI_number: 15833285 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 295 99.0 4e-80 MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSK DEQIKKETRINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLG EASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGV KRVTTAFTFIK >gi|299857061|gb|ADWS01000003.1| GENE 156 161143 - 162183 1251 346 aa, chain - ## HITS:1 COG:yraQ KEGG:ns NR:ns ## COG: yraQ COG0701 # Protein_GI_number: 16131043 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli K12 # 1 346 1 346 346 574 99.0 1e-164 MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADA NPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSL PGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAVIRLVAG LVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVL VLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALA LLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGGLALLF >gi|299857061|gb|ADWS01000003.1| GENE 157 162256 - 162891 531 211 aa, chain - ## HITS:1 COG:yraR KEGG:ns NR:ns ## COG: yraR COG0702 # Protein_GI_number: 16131044 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 211 16 226 226 419 99.0 1e-117 MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGVFNPHDPQLSDALAQVT DPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANAHSPF FYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNETLFAPLCRLLPGNWKSIDAR DVARVMLAESMRPEHEGVTILSSSELRKRAE >gi|299857061|gb|ADWS01000003.1| GENE 158 163019 - 163537 597 172 aa, chain + ## HITS:1 COG:ECs4034 KEGG:ns NR:ns ## COG: ECs4034 COG0693 # Protein_GI_number: 15833288 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli O157:H7 # 1 172 15 186 186 330 100.0 7e-91 MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDE VTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRK LTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA >gi|299857061|gb|ADWS01000003.1| GENE 159 163517 - 163960 376 147 aa, chain - ## HITS:1 COG:yhbP KEGG:ns NR:ns ## COG: yhbP COG3787 # Protein_GI_number: 16131046 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 147 1 147 147 291 100.0 3e-79 METLIAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFYILTEEKTRHAQMSGPQ AAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYNRRFPVARMLSAPVWEIRL DEIKFTDNTLGFGKKMIWLRDSGTEQA >gi|299857061|gb|ADWS01000003.1| GENE 160 164011 - 164313 255 100 aa, chain + ## HITS:1 COG:yhbQ KEGG:ns NR:ns ## COG: yhbQ COG2827 # Protein_GI_number: 16131047 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Escherichia coli K12 # 1 100 1 100 100 179 99.0 1e-45 MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLA LRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD >gi|299857061|gb|ADWS01000003.1| GENE 161 164300 - 164803 673 167 aa, chain - ## HITS:1 COG:ECs4037 KEGG:ns NR:ns ## COG: ECs4037 COG3153 # Protein_GI_number: 15833291 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 332 100.0 2e-91 MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFS PVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRF GFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRF >gi|299857061|gb|ADWS01000003.1| GENE 162 164797 - 165321 729 174 aa, chain - ## HITS:1 COG:ECs4038 KEGG:ns NR:ns ## COG: ECs4038 COG3154 # Protein_GI_number: 15833292 # Func_class: I Lipid transport and metabolism # Function: Putative lipid carrier protein # Organism: Escherichia coli O157:H7 # 1 174 1 174 174 325 100.0 2e-89 MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSI HVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEG DTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMKTAPETKQTSVGEPC >gi|299857061|gb|ADWS01000003.1| GENE 163 165530 - 166525 834 331 aa, chain + ## HITS:1 COG:ECs4039 KEGG:ns NR:ns ## COG: ECs4039 COG0826 # Protein_GI_number: 15833293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 678 100.0 0 MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRK LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASA TNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSS YLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDG ERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQ NFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ >gi|299857061|gb|ADWS01000003.1| GENE 164 166534 - 167412 940 292 aa, chain + ## HITS:1 COG:ECs4040 KEGG:ns NR:ns ## COG: ECs4040 COG0826 # Protein_GI_number: 15833294 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 292 7 298 298 601 100.0 1e-172 MKYSLGPVLWYWPKETLEDFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGS GKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYN AVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARC FTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGL VDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA >gi|299857061|gb|ADWS01000003.1| GENE 165 167618 - 168625 926 335 aa, chain + ## HITS:1 COG:yhbW KEGG:ns NR:ns ## COG: yhbW COG2141 # Protein_GI_number: 16131052 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 335 1 335 335 671 99.0 0 MTDKTIAFSLLDLAPIPEGSSAREAFSRSLDLARLAEKRGYHRYWLAEHHNMTGIASAAT SVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRT MMALRRHMSGDIDNFPRDVAELVDWFDARDPNPNVRPVPGYGEKIPVWLLGSSLYSAQLA AQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFT SMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILR ETDADEIMVNGQIFDHQARLHSFELAMDVKEELLG >gi|299857061|gb|ADWS01000003.1| GENE 166 168743 - 169987 1491 414 aa, chain - ## HITS:1 COG:ECs4042 KEGG:ns NR:ns ## COG: ECs4042 COG0814 # Protein_GI_number: 15833296 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 414 1 414 414 693 99.0 0 MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGL MILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAE ISLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATL FNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPKTIVKCLVYGTLMALALY TIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLG VTLGLFDYLADLFGFDDSALGRLKTALLTFAPPVVGGLLFPNGFLYAIGYAGLAATIWAA IVPALLARASRKRFGSPKFRVWGGKPMITLILVFGVGNALVHILSSFNLLPVYQ >gi|299857061|gb|ADWS01000003.1| GENE 167 170141 - 172030 2534 629 aa, chain - ## HITS:1 COG:ECs4043 KEGG:ns NR:ns ## COG: ECs4043 COG0513 # Protein_GI_number: 15833297 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 629 18 646 646 1053 99.0 0 MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF SLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEEQD LETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRER RDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGE VLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGD GRRFSGERREGRAPRRDDSTGRRRFGGDA >gi|299857061|gb|ADWS01000003.1| GENE 168 172210 - 173094 693 294 aa, chain - ## HITS:1 COG:ECs4044 KEGG:ns NR:ns ## COG: ECs4044 COG4785 # Protein_GI_number: 15833298 # Func_class: R General function prediction only # Function: Lipoprotein NlpI, contains TPR repeats # Organism: Escherichia coli O157:H7 # 1 294 1 294 294 561 100.0 1e-160 MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDE RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFD SVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEK QAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYL GKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ >gi|299857061|gb|ADWS01000003.1| GENE 169 173203 - 175338 188 711 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229537485|ref|ZP_04426621.1| ribosomal protein S1 [Planctomyces limnophilus DSM 3776] # 621 703 433 516 557 77 46 7e-13 MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSV NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNE ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAI EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR DAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD ILGDEDHLGDMDFKVAGSREGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT DGEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE >gi|299857061|gb|ADWS01000003.1| GENE 170 175585 - 175854 445 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16131057|ref|NP_417634.1| 30S ribosomal subunit protein S15 [Escherichia coli str. K-12 substr. MG1655] # 1 89 1 89 89 176 100 1e-42 MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMV SQRRKLLDYLKRKDVARYTQLIERLGLRR >gi|299857061|gb|ADWS01000003.1| GENE 171 176003 - 176947 1070 314 aa, chain - ## HITS:1 COG:ECs4047 KEGG:ns NR:ns ## COG: ECs4047 COG0130 # Protein_GI_number: 15833301 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Escherichia coli O157:H7 # 1 314 1 314 314 615 100.0 1e-176 MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE GRVAPRRLVVEYPA >gi|299857061|gb|ADWS01000003.1| GENE 172 176947 - 177348 648 133 aa, chain - ## HITS:1 COG:ECs4048 KEGG:ns NR:ns ## COG: ECs4048 COG0858 # Protein_GI_number: 15833302 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 239 100.0 1e-63 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD EERRVNPDDSKED >gi|299857061|gb|ADWS01000003.1| GENE 173 177512 - 180184 3310 890 aa, chain - ## HITS:1 COG:ECs4049 KEGG:ns NR:ns ## COG: ECs4049 COG0532 # Protein_GI_number: 15833303 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Escherichia coli O157:H7 # 1 890 1 890 890 1394 100.0 0 MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLIDHLNQKNSGPDKLT LQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREA EESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEA AELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSSDYHVTTSQHARQAE DESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQ KPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEE MGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGE AGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTI EAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTG IDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCG FEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGK FREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKI IGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKA AMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEG ELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA >gi|299857061|gb|ADWS01000003.1| GENE 174 180209 - 181696 1026 495 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 482 9 483 537 399 43 1e-110 MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVQIDRKSGDFDTFR RWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTFDRITTQTAKQVIVQKVRE AERAMVVDQFREHEGEIITGVVKKVNRDNISLDLGNNAEAVILREDMLPRENFRPGDRVR GVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKT NDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE DKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDTFT KYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIEGLDEPTVEALRERAKNALATIAQA QEESLGDNKPADDLLNLEGIDRDLAFKLAARGVCTLEDLAEQGIDDLADIEGLTDEKAGA LIMAARNICWFGDEA >gi|299857061|gb|ADWS01000003.1| GENE 175 181724 - 182146 353 140 aa, chain - ## HITS:1 COG:ECs4051 KEGG:ns NR:ns ## COG: ECs4051 COG0779 # Protein_GI_number: 15833305 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 140 13 152 152 273 100.0 5e-74 MITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPITV AYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVE GKDEVFALSNIQKANLVPHF >gi|299857061|gb|ADWS01000003.1| GENE 176 182807 - 184150 1636 447 aa, chain + ## HITS:1 COG:argG KEGG:ns NR:ns ## COG: argG COG0137 # Protein_GI_number: 16131063 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Escherichia coli K12 # 1 447 1 447 447 910 99.0 0 MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRA MEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKE DGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACG FDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVNPIMGVKFWDESVKIPAEEVTVR FEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL HIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQGRWFDSQALMLRDSLQRWVASQITGEV TLELRRGNDYSILNTVSENLTYKPERLTMEKGDSVFSPDDRIGQLTMRNLDITDTREKLF GYAKTGLLSSSATSGVPQVENMENKGQ >gi|299857061|gb|ADWS01000003.1| GENE 177 184158 - 185783 586 541 aa, chain - ## HITS:1 COG:yhbX KEGG:ns NR:ns ## COG: yhbX COG2194 # Protein_GI_number: 16131064 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 541 7 547 547 1092 99.0 0 MTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLR LLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFA FLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKAFSPYILASR FATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVRVDNMSL YGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMA NQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKL IVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMY FADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNY LINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDKQGNPTPEGQ G >gi|299857061|gb|ADWS01000003.1| GENE 178 186343 - 186675 380 110 aa, chain - ## HITS:1 COG:ECs4054 KEGG:ns NR:ns ## COG: ECs4054 COG1314 # Protein_GI_number: 15833308 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 185 99.0 2e-47 MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLA TLFFIISLVLGNINSNKTNKGSEWENLSAPVKTEQTQPAAPAKPTSDIPN >gi|299857061|gb|ADWS01000003.1| GENE 179 186903 - 188240 1524 445 aa, chain - ## HITS:1 COG:mrsA KEGG:ns NR:ns ## COG: mrsA COG1109 # Protein_GI_number: 16131066 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Escherichia coli K12 # 1 445 1 445 445 836 100.0 0 MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLES ALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTK LPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIEFCKATFPNELSLSELKIVVD CANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAF DGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIP FARAKVGDRYVLEKMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLH DLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEAALGNRGRVLLRKSGTEPLIR VMVEGEDEAQVTEFAHRIADAVKAV >gi|299857061|gb|ADWS01000003.1| GENE 180 188233 - 189081 849 282 aa, chain - ## HITS:1 COG:ECs4056 KEGG:ns NR:ns ## COG: ECs4056 COG0294 # Protein_GI_number: 15833310 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Escherichia coli O157:H7 # 1 282 16 297 297 556 100.0 1e-158 MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGE STRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSL SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKE KLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSL ACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAKENKRYE >gi|299857061|gb|ADWS01000003.1| GENE 181 189171 - 191114 1683 647 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 599 1 597 636 652 56 0.0 MSDMAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREIN VTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWI FFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRF QKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMF EQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFS GADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAG HAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEE IIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHM SDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARRD VRPPAGWEEPGASNNSGDNGSPKAPRPVDEPRTPNPGNTMSEQLGDK >gi|299857061|gb|ADWS01000003.1| GENE 182 191205 - 191834 572 209 aa, chain - ## HITS:1 COG:ECs4058 KEGG:ns NR:ns ## COG: ECs4058 COG0293 # Protein_GI_number: 15833312 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 409 100.0 1e-114 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA APGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQV VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS LFTKVKVRKPDSSRARSREVYIVATGRKP >gi|299857061|gb|ADWS01000003.1| GENE 183 191960 - 192253 454 97 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|188532496|ref|YP_001906293.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Erwinia tasmaniensis Et1/99] # 1 97 1 97 97 179 93 1e-43 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR >gi|299857061|gb|ADWS01000003.1| GENE 184 192409 - 192885 593 158 aa, chain - ## HITS:1 COG:STM3299 KEGG:ns NR:ns ## COG: STM3299 COG0782 # Protein_GI_number: 16766595 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Salmonella typhimurium LT2 # 1 158 1 158 158 282 96.0 2e-76 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL >gi|299857061|gb|ADWS01000003.1| GENE 185 193133 - 194566 924 477 aa, chain + ## HITS:1 COG:dacB KEGG:ns NR:ns ## COG: dacB COG2027 # Protein_GI_number: 16131072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Escherichia coli K12 # 1 477 1 477 477 955 99.0 0 MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVGASAPAIDYHSQQMALP ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN >gi|299857061|gb|ADWS01000003.1| GENE 186 194606 - 195778 1461 390 aa, chain - ## HITS:1 COG:ECs4062 KEGG:ns NR:ns ## COG: ECs4062 COG0536 # Protein_GI_number: 15833316 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 390 1 390 390 687 99.0 0 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV LLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAKPRWLVFNKIDLLDKAEAEEKAKAI AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQ LEEIAEEDDEDWDDDWDEDDEEGVEFIYKR >gi|299857061|gb|ADWS01000003.1| GENE 187 195794 - 196759 751 321 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133178|ref|ZP_00156740.2| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 1 303 1 300 306 293 49 4e-78 MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFLMASIGLGAILAVKKRL PPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFIL KEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWGVIFGVGAATVWVSYGVAQKV LLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQLACLIFCGLNTLVGYGALAEAM ARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIG HRIWGGLRKHTTVVSQPRAGE >gi|299857061|gb|ADWS01000003.1| GENE 188 196886 - 197143 437 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803725|ref|NP_289759.1| 50S ribosomal protein L27 [Escherichia coli O157:H7 EDL933] # 1 85 1 85 85 172 100 1e-41 MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLF AKADGKVKFEVKGPKNRKFISIEAE >gi|299857061|gb|ADWS01000003.1| GENE 189 197164 - 197499 562 111 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|224585100|ref|YP_002638899.1| 50S ribosomal protein L21 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] # 1 111 1 111 111 221 97 3e-56 MCAEAEFYMYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVP FVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA >gi|299857061|gb|ADWS01000003.1| GENE 190 197734 - 198705 1047 323 aa, chain + ## HITS:1 COG:ispB KEGG:ns NR:ns ## COG: ispB COG0142 # Protein_GI_number: 16131077 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Escherichia coli K12 # 1 323 1 323 323 624 100.0 1e-179 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVG YEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAF QMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQ CSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPL LHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQ VLPDTPWREALIGLAHIAVQRDR >gi|299857061|gb|ADWS01000003.1| GENE 191 198933 - 199211 308 92 aa, chain + ## HITS:1 COG:Znlp KEGG:ns NR:ns ## COG: Znlp COG3423 # Protein_GI_number: 15803728 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 1 92 1 92 92 174 100.0 4e-44 MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTD PWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK >gi|299857061|gb|ADWS01000003.1| GENE 192 199259 - 200518 1472 419 aa, chain - ## HITS:1 COG:murA KEGG:ns NR:ns ## COG: murA COG0766 # Protein_GI_number: 16131079 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Escherichia coli K12 # 1 419 1 419 419 812 100.0 0 MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQL GAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCTIGAR PVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMCAATLAEGTT IIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGVERLGGGVYRVLPDRIETGTFLV AAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVGEDWISLDMHGKRPKAVNVRTAPHP AFPTDMQAQFTLLNLVAEGTGFITETVFENRFMHVPELSRMGAHAEIESNTVICHGVEKL SGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKGE >gi|299857061|gb|ADWS01000003.1| GENE 193 200573 - 200842 315 89 aa, chain - ## HITS:1 COG:ECs4069 KEGG:ns NR:ns ## COG: ECs4069 COG5007 # Protein_GI_number: 15833323 # Func_class: K Transcription # Function: Predicted transcriptional regulator, BolA superfamily # Organism: Escherichia coli O157:H7 # 1 89 1 89 89 179 100.0 1e-45 MIEDPMENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVKKQQTVYGPLME YIADNRIHAVSIKAYTPAEWARDRKLNGF >gi|299857061|gb|ADWS01000003.1| GENE 194 200987 - 201280 364 97 aa, chain - ## HITS:1 COG:yrbB KEGG:ns NR:ns ## COG: yrbB COG3113 # Protein_GI_number: 16131081 # Func_class: R General function prediction only # Function: Predicted NTP binding protein (contains STAS domain) # Organism: Escherichia coli K12 # 1 97 33 129 129 170 100.0 6e-43 MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDLSRVSRVDTGGLALLLH LIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR >gi|299857061|gb|ADWS01000003.1| GENE 195 201280 - 201915 935 211 aa, chain - ## HITS:1 COG:yrbC KEGG:ns NR:ns ## COG: yrbC COG2854 # Protein_GI_number: 16131082 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Escherichia coli K12 # 1 211 1 211 211 394 100.0 1e-109 MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPQIRANPDYLRTIV DQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIA PEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQNE WGTLLRTKGIDGLTAQLKSISQQKITLEEKK >gi|299857061|gb|ADWS01000003.1| GENE 196 201934 - 202485 607 183 aa, chain - ## HITS:1 COG:ECs4072 KEGG:ns NR:ns ## COG: ECs4072 COG1463 # Protein_GI_number: 15833326 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 335 100.0 3e-92 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI GGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFED PELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVG TTK >gi|299857061|gb|ADWS01000003.1| GENE 197 202490 - 203272 796 260 aa, chain - ## HITS:1 COG:ECs4073 KEGG:ns NR:ns ## COG: ECs4073 COG0767 # Protein_GI_number: 15833327 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Escherichia coli O157:H7 # 1 260 1 260 260 438 100.0 1e-123 MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIV VSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEI GLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGI DSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVV HSSLAVLGLDFVLTALMFGN >gi|299857061|gb|ADWS01000003.1| GENE 198 203280 - 204089 583 269 aa, chain - ## HITS:1 COG:ECs4074 KEGG:ns NR:ns ## COG: ECs4074 COG1127 # Protein_GI_number: 15833328 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, ATPase component # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 505 100.0 1e-143 MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP DHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPL LHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITM GVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRV RQFLDGIADGPVPFRYPAGDYHADLLPGS >gi|299857061|gb|ADWS01000003.1| GENE 199 204299 - 205276 692 325 aa, chain + ## HITS:1 COG:ECs4075 KEGG:ns NR:ns ## COG: ECs4075 COG0530 # Protein_GI_number: 15833329 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/Na+ antiporter # Organism: Escherichia coli O157:H7 # 1 325 1 325 325 481 99.0 1e-136 MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTVISIGTSLPEIIVSLAA SLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLRRELPLMLLVSVVAGSVLY DGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTREQLAELPRDGGLPVAFLWLG IALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAIGTSLPELATAIAGVRKGENDIA VGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDYSVMLLVSIIFALLCWRRSPQPGRG VGVLLTGGFIVWLAMLYWLSPILVE >gi|299857061|gb|ADWS01000003.1| GENE 200 205290 - 206276 880 328 aa, chain + ## HITS:1 COG:yrbH_1 KEGG:ns NR:ns ## COG: yrbH_1 COG0794 # Protein_GI_number: 16131087 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 1 212 1 212 212 424 100.0 1e-118 MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKS GHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLK RLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLK ARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMT VICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSR HITSVMVADGDHLLGVLHMHDLLRAGVV >gi|299857061|gb|ADWS01000003.1| GENE 201 206297 - 206863 732 188 aa, chain + ## HITS:1 COG:ECs4077 KEGG:ns NR:ns ## COG: ECs4077 COG1778 # Protein_GI_number: 15833331 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 355 100.0 3e-98 MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL DEAKGQSI >gi|299857061|gb|ADWS01000003.1| GENE 202 206860 - 207435 448 191 aa, chain + ## HITS:1 COG:ECs4078 KEGG:ns NR:ns ## COG: ECs4078 COG3117 # Protein_GI_number: 15833332 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 354 100.0 7e-98 MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSY RLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNAL VPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRT SYEIQNKQTQP >gi|299857061|gb|ADWS01000003.1| GENE 203 207404 - 207961 586 185 aa, chain + ## HITS:1 COG:ECs4079 KEGG:ns NR:ns ## COG: ECs4079 COG1934 # Protein_GI_number: 15833333 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 330 100.0 1e-90 MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIV TQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDF VVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRVTTVLVPSQLQDKNNKGQTPA QKKGN >gi|299857061|gb|ADWS01000003.1| GENE 204 207968 - 208693 287 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 2 235 3 233 305 115 31 2e-24 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI IIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANE LMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRII EHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYLGEDFR L >gi|299857061|gb|ADWS01000003.1| GENE 205 208741 - 210174 1363 477 aa, chain + ## HITS:1 COG:ECs4081 KEGG:ns NR:ns ## COG: ECs4081 COG1508 # Protein_GI_number: 15833335 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 873 100.0 0 MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQIDTHEEIDTRE TQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSGDYIDDELPVYQGETTQTL QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLEDILESMGDEEIDIDEVEAVLK RIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARLIISDHLDLLANHDFRTLMRVTR LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN QHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV >gi|299857061|gb|ADWS01000003.1| GENE 206 210197 - 210484 462 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227335124|ref|ZP_03838780.1| hypothetical protein CIT292_04930 [Citrobacter youngae ATCC 29220] # 1 95 1 95 95 182 94 1e-44 MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVEKVTHTSDATLHVNGGE IHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH >gi|299857061|gb|ADWS01000003.1| GENE 207 210602 - 211093 382 163 aa, chain + ## HITS:1 COG:ptsN KEGG:ns NR:ns ## COG: ptsN COG1762 # Protein_GI_number: 16131094 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 1 163 1 163 163 301 99.0 3e-82 MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLPPQVVFEAILTREKM GSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFALLVPADQAKTH LHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTPDEA >gi|299857061|gb|ADWS01000003.1| GENE 208 211139 - 211993 845 284 aa, chain + ## HITS:1 COG:ECs4084 KEGG:ns NR:ns ## COG: ECs4084 COG1660 # Protein_GI_number: 15833338 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 556 100.0 1e-158 MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREISAAVSIDVRNM PESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKES DLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV FDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY LTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKP >gi|299857061|gb|ADWS01000003.1| GENE 209 211990 - 212262 277 90 aa, chain + ## HITS:1 COG:ECs4085 KEGG:ns NR:ns ## COG: ECs4085 COG1925 # Protein_GI_number: 15833339 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 149 100.0 2e-36 MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEAEANSVIALLMLDSAKG RQIEVEATGPQEEEALAAVIALFNSGFDED >gi|299857061|gb|ADWS01000003.1| GENE 210 212476 - 213108 512 210 aa, chain + ## HITS:1 COG:no KEGG:B21_03023 NR:ns ## KEGG: B21_03023 # Name: yrbL # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 210 1 210 210 426 100.0 1e-118 MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDW SGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRY LQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLIPLATWSKWCCLRKQERLWKR FIAQPALAIALQKDLQPRESKTLALTSREA >gi|299857061|gb|ADWS01000003.1| GENE 211 213105 - 213776 485 223 aa, chain - ## HITS:1 COG:mtgA KEGG:ns NR:ns ## COG: mtgA COG0744 # Protein_GI_number: 16131098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Escherichia coli K12 # 1 223 20 242 242 437 100.0 1e-123 MVVLAVFWGGGIALFSVAPVPFSAVMVERQVSAWLHGNFRYVAHSDWVSMDQISPWMGLA VIAAEDQKFPEHWGFDVASIEKALAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKG LEAGLTLGIETVWSKKRILTVYLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAA VLPNPLRFKVSSPSGYVRSRQAWILRQMYQLGGEPFMQQHQLD >gi|299857061|gb|ADWS01000003.1| GENE 212 213830 - 214483 776 217 aa, chain - ## HITS:1 COG:yhbL KEGG:ns NR:ns ## COG: yhbL COG3155 # Protein_GI_number: 16131099 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in an early stage of isoprenoid biosynthesis # Organism: Escherichia coli K12 # 1 217 4 220 220 405 99.0 1e-113 MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTET RNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLSNFATLGSECTVDRELKAL AQAMHQDGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVDDIVV DEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE >gi|299857061|gb|ADWS01000003.1| GENE 213 214713 - 217049 2684 778 aa, chain - ## HITS:1 COG:ZarcB_1 KEGG:ns NR:ns ## COG: ZarcB_1 COG0642 # Protein_GI_number: 15803750 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 562 1 562 562 1055 100.0 0 MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIF FGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDLSLNVQLKDNIAQLNQEIA VREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGC NRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKA CFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNG IVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTS FLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVT VRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLA KNMGGDITVTSEQGKGSTFTLTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVIV ARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDL PPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSK SEALLDIPMLEQYLELVGPKLITDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIK GAAGSVGLRHLQQLGQQIQSPDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK >gi|299857061|gb|ADWS01000003.1| GENE 214 217145 - 218074 824 309 aa, chain - ## HITS:1 COG:ECs4090 KEGG:ns NR:ns ## COG: ECs4090 COG1242 # Protein_GI_number: 15833344 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 642 99.0 0 MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQH RSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPD CVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKV CSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELED YTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSAL ERPWIPPTE >gi|299857061|gb|ADWS01000003.1| GENE 215 218749 - 223209 4763 1486 aa, chain + ## HITS:1 COG:ECs4091_2 KEGG:ns NR:ns ## COG: ECs4091_2 COG0069 # Protein_GI_number: 15833345 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Escherichia coli O157:H7 # 379 1194 1 816 816 1647 99.0 0 MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQ KPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIVEEELQRETLSIVGWRDVP TNEGVLGEIALSSLPHIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLEADKDFYVCSLS NLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGE INTITGNRQWARARTYKFQTPLIPDLHDAAPFVNETGSDSSSMDNMLELLLAGGMDIIRA MRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGLRPAR YVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRSGRILHSAETDDDLKSRH PYKEWMEKNVRRLVPFEDLPDEEVGSRELDDDTLASYQKQFNYSAEELDSVIRVLGENGQ EAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNVF CEAEGQAHRLSFKSPILLYSDFKQLTTMKEEHYRADTLDITFDVTKTTLEATVKELCDKA EKMVRSGTVLLVLSDRNIAKDRLPVPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPH HFAVLLGFGATAIYPYLAYETLGRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGIS TIASYRCSKLFEAVGLHDDVVGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQ GGLLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGE NAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYG TNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSV PGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADL ITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDII KAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYF EFIARETRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHAGKALY CTENNPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQG LAADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCILGK TGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLSVDDLAIHEEHLRGLITEHVQHTGS QRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ >gi|299857061|gb|ADWS01000003.1| GENE 216 223222 - 224640 1648 472 aa, chain + ## HITS:1 COG:gltD KEGG:ns NR:ns ## COG: gltD COG0493 # Protein_GI_number: 16131103 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 1 472 1 472 472 974 99.0 0 MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQADRCLSCGNPYCEWKCP VHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIG NIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLACADVLTRNGVQAVVFDRHPE IGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLGVG TYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGETRDEPFVSMEGKRVVVLGGGDTAM DCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNGKVS GVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPADAVIMAFGFRPHNMEWLAKHSVELDSQG RIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGIMNWLEV >gi|299857061|gb|ADWS01000003.1| GENE 217 224824 - 225303 -33 159 aa, chain + ## HITS:1 COG:yhcG KEGG:ns NR:ns ## COG: yhcG COG4804 # Protein_GI_number: 16131110 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 135 1 135 375 254 94.0 3e-68 MESLSERTSTGYQQIHDGIIHLVDSARTETVRSVNALMTATYWEIGRRIVEFEQGGEARA AYGAQLIKRLSKDLSLRYKRGFSAKNLRQMRLFYLFFQHVEIRQTVSGELTPLGIPQTPS AEFPSAKIWQTLSAKLRGCLIFPQLLYCISYFRFVYSCK >gi|299857061|gb|ADWS01000003.1| GENE 218 225320 - 225625 91 101 aa, chain + ## HITS:1 COG:no KEGG:S3473 NR:ns ## KEGG: S3473 # Name: not_defined # Def: IS600 orf # Organism: S.flexneri_2457T # Pathway: not_defined # 1 101 256 356 356 198 100.0 5e-50 MIYIEQLELIHKSGDVLYPVKITRKSSGKTAFHLVPFGLNKTHDLLEVEDASEAIRLVID ERHSIRCSTLTATITNKKGKRIKRTGIYSIKGVNIKEYNVR >gi|299857061|gb|ADWS01000003.1| GENE 219 225701 - 226165 414 154 aa, chain - ## HITS:1 COG:yhcH KEGG:ns NR:ns ## COG: yhcH COG2731 # Protein_GI_number: 16131111 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli K12 # 1 154 1 154 154 285 100.0 3e-77 MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEK KAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMF AVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA >gi|299857061|gb|ADWS01000003.1| GENE 220 226162 - 227037 326 291 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 6 287 8 314 323 130 30 7e-29 MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHVQRVA IASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTDLPTIAINDAQAAAWAEYQALEGD VTEMVFITVSTGVGGGVVSGGKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASG RGIAAAAQGELAGADARTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVG GSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGEKL >gi|299857061|gb|ADWS01000003.1| GENE 221 227034 - 227723 756 229 aa, chain - ## HITS:1 COG:nanE KEGG:ns NR:ns ## COG: nanE COG3010 # Protein_GI_number: 16131113 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Escherichia coli K12 # 1 229 1 229 229 402 100.0 1e-112 MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQAGAVAIRIEGVANLQA TRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLA RIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTPETPEEPDLALVKTLSDAGCR VIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAVL >gi|299857061|gb|ADWS01000003.1| GENE 222 227771 - 229261 1544 496 aa, chain - ## HITS:1 COG:ECs4097 KEGG:ns NR:ns ## COG: ECs4097 COG0477 # Protein_GI_number: 15833351 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 496 11 506 506 919 99.0 0 MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLTEVQGEFGLTTVQAASL ISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLACGFAPGYITMFIARLVIGM GMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVAAQVYSLVVPVWGWRALFFIG ILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILYRGEHRIANIVMTLAAATALWFC FAGNLQNAAIVAVLGLLCAAIFISFMVQSTGKRWPTGVMLMVVVLFAFLYSWPIQALLPT YLKTDLAYNPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLASQLLIIPVFA IGGANVWVLGLLLFFQQMLGQGIAGILPKLIGGYFDTDQRAAGLGFTYNVGALGGALAPI IGALIAQRLDLGTALASLSFSLTFVVILLIGLDMPSRVQRWLRPEALRTHDAIDGKPFSG AVPFGSAKNDLVKTKS >gi|299857061|gb|ADWS01000003.1| GENE 223 229370 - 230263 983 297 aa, chain - ## HITS:1 COG:ECs4098 KEGG:ns NR:ns ## COG: ECs4098 COG0329 # Protein_GI_number: 15833352 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 593 99.0 1e-169 MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSERE QVLEIVAEEAKGQIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCD HYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRRE HPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECN KVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQERG >gi|299857061|gb|ADWS01000003.1| GENE 224 230385 - 231176 882 263 aa, chain - ## HITS:1 COG:ECs4099 KEGG:ns NR:ns ## COG: ECs4099 COG2186 # Protein_GI_number: 15833353 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 494 100.0 1e-140 MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMIRRREFGEGEQLPSERE LMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIIGELSGMAKDFLSHPGG IAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLA EIPGNPIFMAIHVALLDWLIAARPTVADQALHEHNNVSYQQHIAIVDAIRRHDPDEADRA LQSHLNSVSATWHAFGQTTNKKK >gi|299857061|gb|ADWS01000003.1| GENE 225 231556 - 232923 1193 455 aa, chain + ## HITS:1 COG:dcuD KEGG:ns NR:ns ## COG: dcuD COG3069 # Protein_GI_number: 16131117 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Escherichia coli K12 # 1 455 1 455 455 739 99.0 0 MFGIIISVIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVWLGFGGVLDPAKSSGYLIVD IYNEILRMLSNRIAGLGLSIMAVGGYARYMERTGASRAMVSLLSRPLKLIRSPYIILSAT YVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIF AAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRAFDKKDKNINHEQAELKALDNVP PLYYAILPVMPLILMLGSLFLAHIGLMQSELHLVVVMLLSLTVTMFVEFFRKHNLRETMD DVQAFFDGMGTQFANVVTLVVAGEIFAKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMALV IAICAIVMGSGNAPFMSFASLIPNIAAGLHVPAVVMIMPMHFATTLARAVSPITAVVVVT SGIAGVSPFAVVKRTAIPMAVGFVVNMIATITLFY >gi|299857061|gb|ADWS01000003.1| GENE 226 232966 - 233463 486 165 aa, chain - ## HITS:1 COG:ECs4101 KEGG:ns NR:ns ## COG: ECs4101 COG2969 # Protein_GI_number: 15833355 # Func_class: R General function prediction only # Function: Stringent starvation protein B # Organism: Escherichia coli O157:H7 # 1 133 1 133 165 253 100.0 1e-67 MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAV GNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEDTSIMNDE EASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPALRVVK >gi|299857061|gb|ADWS01000003.1| GENE 227 233469 - 234107 663 212 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase [Haemophilus influenzae R2866] # 1 203 1 203 212 259 62 6e-68 MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVP TLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIING SASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGPGA KELKGYMTRVFERDSFLASLTEAEREMRLGRS >gi|299857061|gb|ADWS01000003.1| GENE 228 234502 - 234894 650 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803764|ref|NP_289798.1| 30S ribosomal protein S9 [Escherichia coli O157:H7 EDL933] # 1 130 1 130 130 254 100 2e-66 MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEK LDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRK ARRRPQFSKR >gi|299857061|gb|ADWS01000003.1| GENE 229 234910 - 235413 881 167 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226956764|ref|YP_002807559.1| 50S ribosomal subunit protein L13 [Escherichia sp. 1_1_43] # 1 167 1 167 167 343 99 3e-93 MSCEPQQLKTFGCSPTCNYLLGKLLMKTFTAKPETVKRDWYVVDATGKTLGRLATELARR LRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIAR RPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI >gi|299857061|gb|ADWS01000003.1| GENE 230 235557 - 236528 774 323 aa, chain - ## HITS:1 COG:ECs4105 KEGG:ns NR:ns ## COG: ECs4105 COG1485 # Protein_GI_number: 15833359 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 323 53 375 375 655 99.0 0 MARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRV HEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFTRGITLVA TSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTLTQAHLWLSPLNDET RAQMDKLWLALAGAKRENSPTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALS RLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGDRLKFEF QRCLSRLQEMQSEEYLKREHLAG >gi|299857061|gb|ADWS01000003.1| GENE 231 236878 - 237276 495 132 aa, chain + ## HITS:1 COG:STM3347 KEGG:ns NR:ns ## COG: STM3347 COG3105 # Protein_GI_number: 16766642 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 132 3 134 134 229 96.0 9e-61 MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSA ELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQMPRDYSEG ASGLLRTGAKRD >gi|299857061|gb|ADWS01000003.1| GENE 232 237430 - 238797 1492 455 aa, chain + ## HITS:1 COG:degQ KEGG:ns NR:ns ## COG: degQ COG0265 # Protein_GI_number: 16131124 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli K12 # 1 455 1 455 455 777 100.0 0 MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAPMLEKVLPAVVSVRVEG TASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ LNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQT ATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSV GIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPG SGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDT STSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRD RVNSIAEMRKVLAAKPAIIALQIVRGNESIYLLMR >gi|299857061|gb|ADWS01000003.1| GENE 233 238887 - 239954 1155 355 aa, chain + ## HITS:1 COG:ECs4108 KEGG:ns NR:ns ## COG: ECs4108 COG0265 # Protein_GI_number: 15833362 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli O157:H7 # 1 355 1 355 355 645 100.0 0 MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVN VYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVG SDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIG LNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQL ATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQV NDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPATN >gi|299857061|gb|ADWS01000003.1| GENE 234 240017 - 240955 1239 312 aa, chain - ## HITS:1 COG:ECs4109 KEGG:ns NR:ns ## COG: ECs4109 COG0039 # Protein_GI_number: 15833363 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 555 99.0 1e-158 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVSKTCPKACIGIITNP VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV TILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR ALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQSALEGMLDTLK KDIALGEEFVNK >gi|299857061|gb|ADWS01000003.1| GENE 235 241390 - 241860 541 156 aa, chain + ## HITS:1 COG:ECs4110 KEGG:ns NR:ns ## COG: ECs4110 COG1438 # Protein_GI_number: 15833364 # Func_class: K Transcription # Function: Arginine repressor # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 293 100.0 6e-80 MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRN AKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEG ILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL >gi|299857061|gb|ADWS01000003.1| GENE 236 242225 - 242488 344 87 aa, chain + ## HITS:1 COG:no KEGG:G2583_3958 NR:ns ## KEGG: G2583_3958 # Name: yhcN # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 87 18 104 104 133 100.0 2e-30 MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKA EEKGATAYQITEARSGDTWHATAELYK >gi|299857061|gb|ADWS01000003.1| GENE 237 242544 - 242816 360 90 aa, chain - ## HITS:1 COG:ECs4112 KEGG:ns NR:ns ## COG: ECs4112 COG2732 # Protein_GI_number: 15833366 # Func_class: K Transcription # Function: Barstar, RNAse (barnase) inhibitor # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 158 100.0 3e-39 MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLPLEIEFVHLGE KTRRRFGALILLFDEAEEELEGHLRFNVRH >gi|299857061|gb|ADWS01000003.1| GENE 238 242908 - 244875 1508 655 aa, chain - ## HITS:1 COG:yhcP KEGG:ns NR:ns ## COG: yhcP COG1289 # Protein_GI_number: 16131130 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 655 1 655 655 1277 99.0 0 MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYS GAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYA WGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIMADLLFSPRSIKQEVDREL ESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQGMRSNLNMESSRWARANRRLKA INTLSLTLITQSCETYLIQNTRPELITDTFREFFDTPVETAQDVHKQLKRLRRVIAWTGE RETPVTIYSWVAAATRYQLLKRGVISNTKINATEEEILQGEPEVKVESAERHHAMVNFWR TTLSCILGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRMVAIDFIYGTLAALPLGLL YFLVIIPNTQQSMLLLCISLAVLGFFLGIEVQKRRLGSMGALASTINIIVLDNPMTFHFS QFLDSALGQIVGCVLAFTVILLVRDKSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLP ALYQQLFLLMNKFPGDLPKFRLALTMIIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVIS ARSDDKRRRYFGQLLEELEIYQEKLRIWQAPPQVTEPVHRLAGMLHKYQHALTDS >gi|299857061|gb|ADWS01000003.1| GENE 239 244881 - 245813 898 310 aa, chain - ## HITS:1 COG:yhcQ KEGG:ns NR:ns ## COG: yhcQ COG1566 # Protein_GI_number: 16131131 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 310 1 310 310 580 100.0 1e-165 MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQ VNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMS REEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGS TAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTR DDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWPAGTTATVVVTGKQDRDESQDSFFR KMAHRLREFG >gi|299857061|gb|ADWS01000003.1| GENE 240 245821 - 246024 117 67 aa, chain - ## HITS:1 COG:no KEGG:G2583_3962 NR:ns ## KEGG: G2583_3962 # Name: aaeX # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 67 24 90 90 103 100.0 3e-21 MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFVWHPALFNTALYCCLFY LISRLFV >gi|299857061|gb|ADWS01000003.1| GENE 241 246207 - 247136 900 309 aa, chain + ## HITS:1 COG:ECs4116 KEGG:ns NR:ns ## COG: ECs4116 COG0583 # Protein_GI_number: 15833370 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 623 100.0 1e-178 MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRSTRSIGLTE AGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLAGLTAKMLKEYPG LSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVCAAKSYLTQYGIPEK PADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGAGIAYVP LMWVINEINRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINSLTDYFVEVGKLFQ EMHGRGKEK >gi|299857061|gb|ADWS01000003.1| GENE 242 247264 - 248709 1805 481 aa, chain - ## HITS:1 COG:tldD KEGG:ns NR:ns ## COG: tldD COG0312 # Protein_GI_number: 16131134 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Escherichia coli K12 # 1 481 1 481 481 889 100.0 0 MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSY NIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLY TSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVR PLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSA VAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDG TMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPM PRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTK PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT A >gi|299857061|gb|ADWS01000003.1| GENE 243 248865 - 252665 3081 1266 aa, chain - ## HITS:1 COG:yhdR+P KEGG:ns NR:ns ## COG: yhdR+P COG3164 # Protein_GI_number: 16132254 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 1266 1 1266 1266 2509 99.0 0 MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKIESATGMPVEASQLSAS WQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTP ITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHR AEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALET AQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFSIP DTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRSDELRIRASNLELAGLEGIRPLAAKLS PALGDVWRSTQPSGKINTLALDIPLQAADKTRFQASWSDLAWKQWKLLPGAEHFSGTLSG SVENGLLTASMKQAKMPYETVFRAPLEIADGQATISWLNNDKGFQLDGRNIDVKAKAVHA RGGFRYLQPANDEPWLGILAGISTDDGSQAWRYFPENLMGKDLVDYLSGAIQGGEADNAT LVYGGNPQLFPYKHNEGQFEVLVPLRNAKFAFQPDWPALTNLDIELDFINDGLWMKTDGV NLGGVRASNLTAVIPDYSKEKLLIDADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGD VNARLHLDIPLNGELVTAKGEVTLRNNSLFIKPLDSTLKNLSGKFSFINSDLQSEPLTAS WFNQPLNVDFSTKEGAKAYQVAVNLNGNWQPAKTGVLPEAVNEALSGSVAWDGKVGIDLP YHAGATYNIELNGDLKNVSSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGADNHFN SRWLLGQKLTLDRAIWAADSKTPPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAA SFPQHITLRTPMLSLGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIK YLYYNPSVAKTRGDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDITISG DTLTLTNGLIDTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSS FNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRF DFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVA PEISATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQP RKEKAQ >gi|299857061|gb|ADWS01000003.1| GENE 244 252733 - 254202 1623 489 aa, chain - ## HITS:1 COG:ZcafA KEGG:ns NR:ns ## COG: ZcafA COG1530 # Protein_GI_number: 15803780 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Escherichia coli O157:H7 EDL933 # 1 489 7 495 495 917 100.0 0 MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT TDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEA ELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLTYE ALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV LHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETV CYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQIEPLYN QEQFDVVMM >gi|299857061|gb|ADWS01000003.1| GENE 245 254192 - 254785 585 197 aa, chain - ## HITS:1 COG:yhdE KEGG:ns NR:ns ## COG: yhdE COG0424 # Protein_GI_number: 16131136 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli K12 # 1 197 1 197 197 367 98.0 1e-102 MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQT AQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLV VTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYE LLSNFNALREKRDKHDG >gi|299857061|gb|ADWS01000003.1| GENE 246 254794 - 255282 432 162 aa, chain - ## HITS:1 COG:ECs4121 KEGG:ns NR:ns ## COG: ECs4121 COG2891 # Protein_GI_number: 15833375 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 227 100.0 6e-60 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ >gi|299857061|gb|ADWS01000003.1| GENE 247 255282 - 256385 1116 367 aa, chain - ## HITS:1 COG:ECs4122 KEGG:ns NR:ns ## COG: ECs4122 COG1792 # Protein_GI_number: 15833376 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 593 99.0 1e-169 MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDTAVSPFYFVSNAPRELL DGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENARLRELLGSPLRQDEQKMV TQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATHA LPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVSS VKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNGANPMTPEEVHRVANERLMQMMPQV LPSPDAMGPKLPEPATGIAQPTPQQPTTGNAATAPAAPTQPAANRSPQRATPPQSGAQPP ARAPGGQ >gi|299857061|gb|ADWS01000003.1| GENE 248 256451 - 257494 1104 347 aa, chain - ## HITS:1 COG:ECs4123 KEGG:ns NR:ns ## COG: ECs4123 COG1077 # Protein_GI_number: 15833377 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Escherichia coli O157:H7 # 1 347 21 367 367 649 100.0 0 MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAK QMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQ VERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNG VVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRN LAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALL RNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE >gi|299857061|gb|ADWS01000003.1| GENE 249 257799 - 259739 1170 646 aa, chain - ## HITS:1 COG:ECs4124_3 KEGG:ns NR:ns ## COG: ECs4124_3 COG2200 # Protein_GI_number: 15833378 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 395 646 1 252 252 497 99.0 1e-140 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFST LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV TCEGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV >gi|299857061|gb|ADWS01000003.1| GENE 250 259891 - 260865 1130 324 aa, chain + ## HITS:1 COG:ECs4125 KEGG:ns NR:ns ## COG: ECs4125 COG0604 # Protein_GI_number: 15833379 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 639 100.0 0 MQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI PGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARK AMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR ESTHEYLKSLGASRILPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAAC GLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISL SEAPNFAEAIINNQIQGRTLVKVN >gi|299857061|gb|ADWS01000003.1| GENE 251 260902 - 261066 83 54 aa, chain + ## HITS:1 COG:no KEGG:EcolC_0453 NR:ns ## KEGG: EcolC_0453 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ATCC8739 # Pathway: not_defined # 1 48 1 48 276 100 97.0 1e-20 MTSLFNRLTGKAVSRTAFVEHLGQEVVQHHPNWKVMISTDHKLMRIDTPLNSHY >gi|299857061|gb|ADWS01000003.1| GENE 252 261843 - 262313 489 156 aa, chain + ## HITS:1 COG:ECs4127 KEGG:ns NR:ns ## COG: ECs4127 COG0511 # Protein_GI_number: 15833381 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 246 100.0 2e-65 MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVMQQAYAAPMMQQPAQSN AAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEA MKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE >gi|299857061|gb|ADWS01000003.1| GENE 253 262324 - 263673 1428 449 aa, chain + ## HITS:1 COG:ECs4128 KEGG:ns NR:ns ## COG: ECs4128 COG0439 # Protein_GI_number: 15833382 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Escherichia coli O157:H7 # 1 449 1 449 449 882 99.0 0 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSY LNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAI AAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQ SISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVV EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVT EMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAP GGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDL QIRIMNDENFQHGGTNIHYLEKKLGLQEK >gi|299857061|gb|ADWS01000003.1| GENE 254 263782 - 264024 269 80 aa, chain + ## HITS:1 COG:ECs4129 KEGG:ns NR:ns ## COG: ECs4129 COG3924 # Protein_GI_number: 15833383 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 80 1 80 80 149 100.0 2e-36 MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLPGVAPGFTGFPRWFEMACILTPLLFIGL CWAMVKFIYRDIPLEDDDAA >gi|299857061|gb|ADWS01000003.1| GENE 255 264014 - 265465 1578 483 aa, chain + ## HITS:1 COG:ECs4130 KEGG:ns NR:ns ## COG: ECs4130 COG4145 # Protein_GI_number: 15833384 # Func_class: H Coenzyme transport and metabolism # Function: Na+/panthothenate symporter # Organism: Escherichia coli O157:H7 # 1 483 3 485 485 797 100.0 0 MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMGGIVLAMTLTATYISAS SFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILARRYNAVTLNDMLFARYQS RLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYETGLLIFGISIALYTAFGGFRA SVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQTIDPQLVTPQGADDILSPAFMT SFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPD LTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNIRPDQM QNETRLKRMSAVITLVLGALLLLAAWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERA NAKGALSAMIVGGVLYAVLATLNIQYLGFHPIVPSLLLSLLAFLVGNRFGTSVPQATVLT TDK >gi|299857061|gb|ADWS01000003.1| GENE 256 265477 - 266358 1543 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15833385|ref|NP_312158.1| ribosomal protein L11 methyltransferase [Escherichia coli O157:H7 str. Sakai] # 1 293 1 293 293 598 100 1e-170 MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLF DAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRD VPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGKTVIDFGCGSGILAIAALKLG AAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAGPLRELA PLISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVVEKEEWCRITGRKN >gi|299857061|gb|ADWS01000003.1| GENE 257 266687 - 267652 1101 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 1 317 28 344 353 428 65 1e-118 MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVH IDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDV VKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGE AEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHY LDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQEHAPNDQFRRTF NAIEDASEQLEALEAYFENFA >gi|299857061|gb|ADWS01000003.1| GENE 258 267678 - 267974 401 98 aa, chain + ## HITS:1 COG:ECs4133 KEGG:ns NR:ns ## COG: ECs4133 COG2901 # Protein_GI_number: 15833387 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Escherichia coli O157:H7 # 1 98 1 98 98 162 100.0 1e-40 MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN >gi|299857061|gb|ADWS01000003.1| GENE 259 268060 - 268944 780 294 aa, chain + ## HITS:1 COG:yhdJ KEGG:ns NR:ns ## COG: yhdJ COG0863 # Protein_GI_number: 16131150 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Escherichia coli K12 # 1 294 3 296 296 608 98.0 1e-174 MRTGCEPTRFGNEAKTIIHGDALAELKKIPAESVDLIFADPPYNIGKNFDGLIEAWKEDL FIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLFTIKSRIVWSYDSSGVQAK KHYGSMYEPILMMVKDAKNYTFNGDAILVEAKTGSQRALIDYRKNPPQPYNHQKVPGNVW DFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDIVLDPFAGSFTTGAVAVSSGRKFI GIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTGNLSKRSRLSEVDPDLIAK >gi|299857061|gb|ADWS01000003.1| GENE 260 269028 - 269207 151 59 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3748 NR:ns ## KEGG: EcE24377A_3748 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 59 10 68 68 87 100.0 2e-16 MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM >gi|299857061|gb|ADWS01000003.1| GENE 261 269210 - 269872 503 220 aa, chain - ## HITS:1 COG:ECs4136 KEGG:ns NR:ns ## COG: ECs4136 COG1309 # Protein_GI_number: 15833390 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 220 1 220 220 424 99.0 1e-119 MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYWHFENKTQLFN EMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAKIPRQQALLKILYHKCEFN DEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLDVVMIIINGAFSGIVQNWLMN MAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELSVM >gi|299857061|gb|ADWS01000003.1| GENE 262 270271 - 271428 936 385 aa, chain + ## HITS:1 COG:acrE KEGG:ns NR:ns ## COG: acrE COG0845 # Protein_GI_number: 16131153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 1 385 1 385 385 674 100.0 0 MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIVKTAPLEVKTELPGRTN AYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAAAI AHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPIS GRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHKENAT SNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARIDEGV QPDAILIPQQGVSRTPRGDATVLIVNDKSQVEARPVVASQAIGDKWLISEGLKSGDQVIV SGLQKARPGEQVKATTDTPADTASK >gi|299857061|gb|ADWS01000003.1| GENE 263 271440 - 274544 2782 1034 aa, chain + ## HITS:1 COG:acrF KEGG:ns NR:ns ## COG: acrF COG0841 # Protein_GI_number: 16131154 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1034 1 1034 1034 1947 99.0 0 MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDT VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQ EVQQQGISVEKSSSSYLMVAGFVSDNPDTTQDDISDYVASNVKDTLSRLNGVGDVQLFGA QYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRL KNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANAL DTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQ NMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM MEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL SVLVALILTPALCATLLKPTSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRY LLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKN EKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNSDENSAEAVIHRAKMELGKIRDG FVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGL EDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRM LPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAM ALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSV MLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVV EATLMAVRMRLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFF VPVFFVVIRRCFKG >gi|299857061|gb|ADWS01000003.1| GENE 264 274797 - 275018 254 73 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_4585 NR:ns ## KEGG: ECH74115_4585 # Name: not_defined # Def: putative lipoprotein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 73 1 73 73 115 100.0 6e-25 MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAA VAGLTMGIIALSK >gi|299857061|gb|ADWS01000003.1| GENE 265 275449 - 276474 957 341 aa, chain + ## HITS:1 COG:yhdW KEGG:ns NR:ns ## COG: yhdW COG0834 # Protein_GI_number: 16131156 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 37 341 1 305 305 620 99.0 1e-177 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFS IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIK QVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR >gi|299857061|gb|ADWS01000003.1| GENE 266 276542 - 277723 856 393 aa, chain + ## HITS:1 COG:ECs4142 KEGG:ns NR:ns ## COG: ECs4142 COG4597 # Protein_GI_number: 15833396 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 393 7 399 399 698 99.0 0 MSHRRSTVKGSLSFANPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLD RGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLL RKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGD GFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALH WDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGL PNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAI ETIAMTMSVYLIISLTISLLMNIYNRRIAIVER >gi|299857061|gb|ADWS01000003.1| GENE 267 277733 - 278836 892 367 aa, chain + ## HITS:1 COG:ECs4143 KEGG:ns NR:ns ## COG: ECs4143 COG0765 # Protein_GI_number: 15833397 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 367 2 368 368 674 98.0 0 MTKVLLSQPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWAFLQA NWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILP HRGRYIAVWAVIYPLIVWWLMYGGFFGLERVETRQWGGLTLTLIIASVGIAGALPWGILL ALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVIL FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF KDTSLVIIIGLFDLFSSVQQATVDPTWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRF NTGRTPH >gi|299857061|gb|ADWS01000003.1| GENE 268 278844 - 279602 533 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 12 250 1 242 245 209 45 7e-53 MSQILLQPANAMITLENVNKWYGQFHVLKNINLTVQPGERIVLCGPSGSGKSTTIRCINH LEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPHLTVLQNCTLAPIWVRKMP KKEAEALAMHYLERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKPKIMLFDEPTSALDP EMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVIFMDRGEIVEQAAPDEFFAHPKS ERTRAFLSQVIH Prediction of potential genes in microbial genomes Time: Sun May 15 21:47:05 2011 Seq name: gi|299857060|gb|ADWS01000004.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont3.1, whole genome shotgun sequence Length of sequence - 240088 bp Number of predicted genes - 224, with homology - 222 Number of transcription units - 114, operones - 50 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 23/0.000 - CDS 3 - 327 150 ## COG2801 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 444 - 743 279 ## COG2963 Transposase and inactivated derivatives - Prom 817 - 876 3.0 + Prom 754 - 813 2.3 3 2 Tu 1 . + CDS 837 - 1259 139 ## gi|256019390|ref|ZP_05433255.1| hypothetical protein ShiD9_10781 + Prom 1607 - 1666 5.1 4 3 Op 1 9/0.026 + CDS 1819 - 3579 1548 ## COG3519 Uncharacterized protein conserved in bacteria 5 3 Op 2 1/0.947 + CDS 3543 - 4622 686 ## COG3520 Uncharacterized protein conserved in bacteria 6 3 Op 3 1/0.947 + CDS 4603 - 5139 591 ## COG3521 Uncharacterized protein conserved in bacteria 7 3 Op 4 1/0.947 + CDS 5143 - 5571 427 ## COG3518 Uncharacterized protein conserved in bacteria 8 3 Op 5 . + CDS 5571 - 6947 799 ## COG3515 Uncharacterized protein conserved in bacteria 9 3 Op 6 . + CDS 7012 - 7560 -30 ## EcE24377A_3136 hypothetical protein 10 4 Tu 1 . - CDS 7906 - 9249 1321 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 9309 - 9368 8.0 + Prom 9302 - 9361 5.6 11 5 Tu 1 . + CDS 9391 - 10722 1295 ## COG0548 Acetylglutamate kinase + Term 10727 - 10794 6.0 - Term 10721 - 10777 5.6 12 6 Op 1 13/0.000 - CDS 10784 - 12610 1379 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 13 6 Op 2 5/0.237 - CDS 12610 - 16152 3090 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 14 6 Op 3 5/0.237 - CDS 16145 - 19033 2767 ## COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like - Prom 19093 - 19152 4.1 15 7 Op 1 5/0.237 - CDS 19208 - 22576 2894 ## COG1330 Exonuclease V gamma subunit 16 7 Op 2 . - CDS 22589 - 22912 120 ## COG4967 Tfp pilus assembly protein PilV 17 7 Op 3 . - CDS 22897 - 23304 215 ## ECO103_3383 hypothetical protein 18 7 Op 4 12/0.000 - CDS 23301 - 23864 626 ## COG4795 Type II secretory pathway, component PulJ 19 7 Op 5 4/0.368 - CDS 23855 - 24325 171 ## COG2165 Type II secretory pathway, pseudopilin PulG - Prom 24449 - 24508 2.4 - Term 24454 - 24491 4.5 20 8 Op 1 11/0.000 - CDS 24510 - 25304 842 ## COG0207 Thymidylate synthase 21 8 Op 2 5/0.237 - CDS 25311 - 26186 1050 ## COG0682 Prolipoprotein diacylglyceryltransferase 22 9 Op 1 7/0.079 - CDS 26337 - 28583 2112 ## COG3605 Signal transduction protein containing GAF and PtsI domains 23 9 Op 2 . - CDS 28596 - 29126 290 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 29366 - 29425 5.8 24 10 Tu 1 . - CDS 29479 - 29625 62 ## ECO103_3390 hypothetical protein - Prom 29713 - 29772 3.5 + Prom 29706 - 29765 4.8 25 11 Op 1 5/0.237 + CDS 29811 - 30500 695 ## COG3066 DNA mismatch repair protein 26 11 Op 2 . + CDS 30569 - 31282 760 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 31286 - 31331 2.7 + Prom 31291 - 31350 3.6 27 12 Tu 1 . + CDS 31420 - 31638 268 ## G2583_3488 hypothetical protein + Term 31643 - 31680 5.1 + Prom 31661 - 31720 7.3 28 13 Tu 1 . + CDS 31746 - 32786 1147 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 32789 - 32826 8.0 - Term 32777 - 32814 8.0 29 14 Op 1 5/0.237 - CDS 32818 - 34011 1352 ## COG0477 Permeases of the major facilitator superfamily 30 14 Op 2 . - CDS 34004 - 36163 2024 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 36199 - 36258 3.2 31 15 Tu 1 . + CDS 36749 - 37780 918 ## COG1609 Transcriptional regulators + Term 37950 - 37989 0.1 32 16 Tu 1 . - CDS 37787 - 39049 1207 ## COG0019 Diaminopimelate decarboxylase - Prom 39082 - 39141 9.1 + Prom 39028 - 39087 6.7 33 17 Tu 1 . + CDS 39171 - 40106 684 ## COG0583 Transcriptional regulator - Term 39828 - 39876 -1.0 34 18 Tu 1 . - CDS 40093 - 40785 709 ## COG1794 Aspartate racemase - Term 40868 - 40907 10.2 35 19 Tu 1 . - CDS 40914 - 42272 1293 ## COG0477 Permeases of the major facilitator superfamily - Prom 42499 - 42558 6.4 - Term 42593 - 42626 4.5 36 20 Op 1 9/0.026 - CDS 42647 - 43408 750 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 37 20 Op 2 1/0.947 - CDS 43438 - 44274 651 ## COG3717 5-keto 4-deoxyuronate isomerase - Prom 44376 - 44435 5.8 38 21 Tu 1 . - CDS 44561 - 45742 1000 ## COG0183 Acetyl-CoA acetyltransferase - Prom 45789 - 45848 6.0 + Prom 45903 - 45962 4.3 39 22 Tu 1 . + CDS 45997 - 47226 404 ## COG0814 Amino acid permeases + Term 47233 - 47287 15.1 + Prom 47501 - 47560 7.6 40 23 Tu 1 . + CDS 47800 - 48318 220 ## COG2771 DNA-binding HTH domain-containing proteins + Term 48353 - 48392 6.1 + Prom 49045 - 49104 3.4 41 24 Op 1 . + CDS 49126 - 49461 204 ## COG3710 DNA-binding winged-HTH domains 42 24 Op 2 . + CDS 49454 - 49936 62 ## ECO103_3408 hypothetical protein 43 25 Tu 1 . - CDS 50085 - 50510 130 ## ECUMN_3178 hypothetical protein - Prom 50709 - 50768 4.2 + Prom 50410 - 50469 6.4 44 26 Op 1 . + CDS 50704 - 51141 92 ## EC55989_3127 hypothetical protein + Prom 51197 - 51256 5.7 45 26 Op 2 . + CDS 51419 - 51910 289 ## COG0457 FOG: TPR repeat + Term 51935 - 51983 11.3 + Prom 52139 - 52198 4.3 46 27 Tu 1 . + CDS 52245 - 53621 -5 ## COG0457 FOG: TPR repeat + Prom 53674 - 53733 4.7 47 28 Tu 1 . + CDS 53789 - 54007 163 ## JW5456 hypothetical protein + Term 54031 - 54070 4.4 - Term 54019 - 54056 3.2 48 29 Tu 1 . - CDS 54074 - 54262 106 ## ECSE_3112 hypothetical protein - Prom 54353 - 54412 7.4 + Prom 54210 - 54269 7.0 49 30 Tu 1 . + CDS 54330 - 54566 79 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Term 54513 - 54553 0.4 50 31 Op 1 . - CDS 54611 - 55054 75 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 51 31 Op 2 . - CDS 55088 - 55243 111 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 55315 - 55374 8.8 52 32 Tu 1 . - CDS 55464 - 55895 140 ## EC55989_3135 hypothetical protein - Prom 55958 - 56017 2.6 53 33 Op 1 . - CDS 56084 - 56692 -76 ## ECO103_3419 hypothetical protein 54 33 Op 2 . - CDS 56708 - 57442 80 ## COG4669 Type III secretory pathway, lipoprotein EscJ 55 33 Op 3 . - CDS 57483 - 57770 241 ## EcolC_0853 hypothetical protein - Prom 57827 - 57886 3.9 - Term 57897 - 57945 0.1 56 34 Tu 1 . - CDS 58044 - 59225 339 ## ECO103_3424 type III secretion protein EprH - Prom 59326 - 59385 11.4 + Prom 59320 - 59379 5.9 57 35 Op 1 . + CDS 59483 - 59983 143 ## COG2771 DNA-binding HTH domain-containing proteins 58 35 Op 2 . + CDS 59985 - 60278 67 ## EC55989_3142 hypothetical protein + Term 60280 - 60328 12.5 - Term 60268 - 60314 8.3 59 36 Op 1 . - CDS 60339 - 60701 162 ## COG1377 Flagellar biosynthesis pathway, component FlhB 60 36 Op 2 . - CDS 60728 - 60931 60 ## COG1377 Flagellar biosynthesis pathway, component FlhB 61 36 Op 3 2/0.816 - CDS 60892 - 61458 187 ## COG1377 Flagellar biosynthesis pathway, component FlhB 62 36 Op 4 8/0.026 - CDS 61467 - 61703 145 ## COG4791 Type III secretory pathway, component EscT - Prom 61762 - 61821 5.9 63 37 Op 1 7/0.079 - CDS 62236 - 62496 159 ## COG4794 Type III secretory pathway, component EscS 64 37 Op 2 7/0.079 - CDS 62506 - 63171 113 ## COG4790 Type III secretory pathway, component EscR 65 37 Op 3 . - CDS 63161 - 63502 365 ## COG1886 Flagellar motor switch/type III secretory pathway protein - Prom 63534 - 63593 7.8 66 38 Op 1 . - CDS 64240 - 65454 576 ## EC55989_3151 hypothetical protein 67 38 Op 2 . - CDS 65479 - 65850 142 ## ECIAI1_2983 hypothetical protein - Prom 65978 - 66037 6.7 - Term 66469 - 66509 5.0 68 39 Op 1 . - CDS 66524 - 67513 825 ## S3059 hypothetical protein 69 39 Op 2 . - CDS 67597 - 68088 544 ## S1728 hypothetical protein 70 40 Op 1 . - CDS 68211 - 68387 204 ## gi|213027127|ref|ZP_03341574.1| hypothetical protein Salmonelentericaenterica_33804 71 40 Op 2 . - CDS 68389 - 69117 437 ## ECO26_3950 hypothetical protein + Prom 69391 - 69450 2.6 72 41 Tu 1 . + CDS 69635 - 69853 82 ## + Term 69964 - 70017 0.2 73 42 Op 1 . - CDS 70041 - 70700 265 ## SbBS512_E3301 hypothetical protein 74 42 Op 2 . - CDS 70693 - 72324 830 ## COG0582 Integrase - Prom 72543 - 72602 5.4 - TRNA 72459 - 72532 78.8 # Gly CCC 0 0 75 43 Tu 1 . - CDS 72611 - 73366 380 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 73392 - 73451 4.1 + Prom 73651 - 73710 3.5 76 44 Op 1 12/0.000 + CDS 73781 - 76078 1851 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 77 44 Op 2 15/0.000 + CDS 76089 - 76967 642 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 78 44 Op 3 . + CDS 76964 - 77443 300 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs - Term 77433 - 77475 11.1 79 45 Tu 1 . - CDS 77483 - 79261 1057 ## COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 80 46 Op 1 2/0.816 + CDS 79740 - 80927 1428 ## COG0078 Ornithine carbamoyltransferase + Term 80934 - 80967 5.2 81 46 Op 2 4/0.368 + CDS 80985 - 82181 1151 ## COG1171 Threonine dehydratase 82 46 Op 3 4/0.368 + CDS 82239 - 83450 1563 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 83468 - 83500 5.0 83 47 Op 1 . + CDS 83503 - 84888 1009 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 84 47 Op 2 . + CDS 84936 - 85868 1167 ## COG0549 Carbamate kinase + Term 85875 - 85912 7.2 85 48 Op 1 . - CDS 85909 - 87534 1263 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 86 48 Op 2 . - CDS 87582 - 88184 168 ## ECIAI1_2996 hypothetical protein + Prom 88294 - 88353 6.3 87 49 Tu 1 . + CDS 88455 - 89033 174 ## COG2068 Uncharacterized MobA-related protein + Prom 89193 - 89252 9.4 88 50 Op 1 1/0.947 + CDS 89355 - 92453 2582 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 89 50 Op 2 2/0.816 + CDS 92456 - 93784 1303 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 90 50 Op 3 12/0.000 + CDS 93835 - 94614 807 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 91 50 Op 4 2/0.816 + CDS 94611 - 97481 2682 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs + Term 97491 - 97518 1.5 92 51 Op 1 4/0.368 + CDS 97646 - 99046 292 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 93 51 Op 2 2/0.816 + CDS 99064 - 100380 1322 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 94 51 Op 3 . + CDS 100416 - 101783 1187 ## COG2252 Permeases + Term 101789 - 101826 6.1 - Term 101776 - 101812 6.7 95 52 Op 1 3/0.500 - CDS 101819 - 102307 241 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 96 52 Op 2 . - CDS 102307 - 104241 905 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 104305 - 104364 6.0 97 53 Op 1 . + CDS 104662 - 106110 375 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 98 53 Op 2 . + CDS 106112 - 106237 112 ## + Term 106259 - 106287 -0.3 + Prom 106276 - 106335 3.6 99 54 Tu 1 . + CDS 106360 - 106908 460 ## COG1443 Isopentenyldiphosphate isomerase - Term 106900 - 106930 2.1 100 55 Op 1 8/0.026 - CDS 106951 - 108468 1992 ## COG1190 Lysyl-tRNA synthetase (class II) 101 55 Op 2 5/0.237 - CDS 108478 - 109359 1005 ## COG1186 Protein chain release factor B - Prom 109543 - 109602 1.7 - Term 109609 - 109643 2.6 102 56 Op 1 7/0.079 - CDS 109667 - 111400 1769 ## COG0608 Single-stranded DNA-specific exonuclease 103 56 Op 2 8/0.026 - CDS 111406 - 112116 728 ## COG1651 Protein-disulfide isomerase 104 56 Op 3 . - CDS 112141 - 113037 728 ## COG4974 Site-specific recombinase XerD - Prom 113061 - 113120 4.0 + Prom 113058 - 113117 3.4 105 57 Tu 1 . + CDS 113149 - 113670 721 ## COG0716 Flavodoxins + Term 113677 - 113719 1.2 - Term 113629 - 113679 2.6 106 58 Op 1 . - CDS 113710 - 114117 243 ## ECO103_3471 hypothetical protein 107 58 Op 2 . - CDS 114098 - 114364 336 ## COG2938 Uncharacterized conserved protein - Prom 114597 - 114656 3.7 + Prom 114515 - 114574 3.1 108 59 Tu 1 . + CDS 114607 - 115587 1098 ## COG0354 Predicted aminomethyltransferase related to GcvT + Term 115728 - 115757 1.2 - Term 115579 - 115627 3.1 109 60 Tu 1 . - CDS 115664 - 116323 656 ## COG1272 Predicted membrane protein, hemolysin III homolog - Prom 116398 - 116457 3.5 110 61 Tu 1 . - CDS 116487 - 116798 354 ## COG3097 Uncharacterized protein conserved in bacteria - Prom 117032 - 117091 3.2 + Prom 116754 - 116813 3.3 111 62 Tu 1 . + CDS 116837 - 118276 1678 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 112 63 Tu 1 . - CDS 118333 - 119076 243 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Term 119291 - 119316 -0.5 113 64 Op 1 12/0.000 - CDS 119342 - 122215 3287 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain - Prom 122237 - 122296 1.8 - Term 122260 - 122304 2.3 114 64 Op 2 18/0.000 - CDS 122334 - 122723 509 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 115 64 Op 3 5/0.237 - CDS 122747 - 123841 1413 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) - Term 124210 - 124245 4.1 116 65 Op 1 8/0.026 - CDS 124289 - 125491 1243 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 117 65 Op 2 8/0.026 - CDS 125514 - 126692 845 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 118 65 Op 3 5/0.237 - CDS 126689 - 128014 1385 ## COG0006 Xaa-Pro aminopeptidase 119 65 Op 4 . - CDS 128040 - 128618 637 ## COG3079 Uncharacterized protein conserved in bacteria - Prom 128647 - 128706 1.5 + Prom 128668 - 128727 3.1 120 66 Tu 1 . + CDS 128786 - 129115 366 ## COG3027 Uncharacterized protein conserved in bacteria 121 67 Tu 1 . - CDS 129065 - 129328 63 ## ECIAI1_3030 hypothetical protein - Prom 129383 - 129442 2.0 122 68 Tu 1 . + CDS 129415 - 129963 382 ## COG0212 5-formyltetrahydrofolate cyclo-ligase + Term 130140 - 130171 3.2 - Term 130686 - 130722 7.1 123 69 Tu 1 . - CDS 130744 - 131976 1377 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 132021 - 132080 4.4 124 70 Op 1 . - CDS 132231 - 132890 836 ## COG0120 Ribose 5-phosphate isomerase 125 70 Op 2 . - CDS 132946 - 133176 146 ## COG0583 Transcriptional regulator - Prom 133219 - 133278 3.5 + Prom 133229 - 133288 1.5 126 71 Tu 1 . + CDS 133318 - 134211 889 ## COG0583 Transcriptional regulator + Term 134225 - 134257 2.5 + Prom 134238 - 134297 4.1 127 72 Op 1 6/0.132 + CDS 134415 - 136559 2294 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit 128 72 Op 2 . + CDS 136552 - 137547 842 ## COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family 129 72 Op 3 . + CDS 137558 - 138343 907 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 130 72 Op 4 . + CDS 138367 - 139845 1209 ## COG0427 Acetyl-CoA hydrolase 131 73 Tu 1 . - CDS 139842 - 140738 648 ## COG0583 Transcriptional regulator - Prom 140820 - 140879 6.2 - Term 140849 - 140882 -0.3 132 74 Op 1 5/0.237 - CDS 140905 - 141645 803 ## COG2968 Uncharacterized conserved protein 133 74 Op 2 5/0.237 - CDS 141738 - 142373 658 ## COG1279 Lysine efflux permease - Prom 142401 - 142460 5.7 - Term 142464 - 142503 5.0 134 75 Tu 1 . - CDS 142512 - 143372 1045 ## COG0668 Small-conductance mechanosensitive channel - Prom 143456 - 143515 3.9 - Term 143677 - 143705 2.1 135 76 Tu 1 9/0.026 - CDS 143730 - 144809 1102 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 144950 - 145009 6.7 - Term 144984 - 145014 3.0 136 77 Op 1 26/0.000 - CDS 145024 - 146187 1455 ## COG0126 3-phosphoglycerate kinase 137 77 Op 2 . - CDS 146237 - 147256 706 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Prom 147347 - 147406 6.1 138 78 Op 1 . + CDS 147628 - 148059 349 ## COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif 139 78 Op 2 . + CDS 148082 - 148660 623 ## EC55989_3217 putative ABC-type transport system 140 78 Op 3 34/0.000 + CDS 148661 - 149368 395 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 141 78 Op 4 3/0.500 + CDS 149356 - 150033 477 ## COG1122 ABC-type cobalt transport system, ATPase component 142 78 Op 5 . + CDS 150027 - 150704 183 ## PROTEIN SUPPORTED gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 143 79 Op 1 3/0.500 - CDS 150676 - 151389 453 ## COG1072 Panthothenate kinase 144 79 Op 2 3/0.500 - CDS 151386 - 151895 343 ## COG3722 Transcriptional regulator 145 79 Op 3 2/0.816 - CDS 151917 - 152882 847 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 146 79 Op 4 2/0.816 - CDS 152879 - 154156 1239 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 147 79 Op 5 3/0.500 - CDS 154171 - 155559 1520 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component 148 79 Op 6 2/0.816 - CDS 155587 - 155946 285 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 156036 - 156095 7.2 - Term 156286 - 156334 5.0 149 80 Tu 1 . - CDS 156345 - 158336 2472 ## COG0021 Transketolase - Prom 158415 - 158474 3.8 + Prom 158533 - 158592 5.0 150 81 Tu 1 . + CDS 158614 - 159372 844 ## COG0501 Zn-dependent protease with chaperone function + Term 159472 - 159509 -0.4 - Term 159369 - 159411 5.8 151 82 Op 1 . - CDS 159428 - 160171 713 ## ECIAI1_3062 hypothetical protein 152 82 Op 2 . - CDS 160158 - 161267 918 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 153 82 Op 3 13/0.000 - CDS 161271 - 162128 1114 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 154 82 Op 4 13/0.000 - CDS 162128 - 162877 974 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 155 82 Op 5 9/0.026 - CDS 162903 - 163388 688 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 156 82 Op 6 3/0.500 - CDS 163399 - 163827 485 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 163859 - 163918 3.4 157 83 Tu 1 . - CDS 163946 - 166744 1852 ## COG3933 Transcriptional antiterminator - Prom 166924 - 166983 5.2 - Term 166948 - 166991 7.5 158 84 Tu 1 . - CDS 167003 - 167923 1300 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family - Prom 167943 - 168002 3.0 - Term 167947 - 167991 7.4 159 85 Tu 1 . - CDS 168059 - 168790 574 ## EcE24377A_3280 putative lipoprotein - Prom 168816 - 168875 6.1 - Term 168874 - 168918 11.0 160 86 Tu 1 . - CDS 168936 - 170912 2293 ## COG1166 Arginine decarboxylase (spermidine biosynthesis) - Prom 170933 - 170992 4.0 161 87 Tu 1 . + CDS 171707 - 172861 1298 ## COG0192 S-adenosylmethionine synthetase + Term 172884 - 172916 3.0 + Prom 173137 - 173196 9.3 162 88 Tu 1 . + CDS 173297 - 174691 1678 ## COG0477 Permeases of the major facilitator superfamily + Term 174697 - 174740 3.1 + Prom 174707 - 174766 2.8 163 89 Tu 1 6/0.132 + CDS 174810 - 175265 423 ## COG3091 Uncharacterized protein conserved in bacteria + Prom 175279 - 175338 4.1 164 90 Op 1 3/0.500 + CDS 175360 - 176067 528 ## COG2356 Endonuclease I 165 90 Op 2 2/0.816 + CDS 176147 - 176878 554 ## COG1385 Uncharacterized protein conserved in bacteria 166 90 Op 3 2/0.816 + CDS 176891 - 177841 343 ## PROTEIN SUPPORTED gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme + Term 177876 - 177932 3.4 + Prom 177854 - 177913 3.2 167 91 Op 1 8/0.026 + CDS 177950 - 178513 594 ## COG1678 Putative transcriptional regulator 168 91 Op 2 . + CDS 178513 - 178929 465 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) + Term 179023 - 179066 3.2 - Term 178932 - 178966 -0.2 169 92 Tu 1 . - CDS 179105 - 180085 779 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT - Prom 180334 - 180393 3.5 + Prom 179999 - 180058 3.0 170 93 Op 1 5/0.237 + CDS 180103 - 180807 635 ## COG0325 Predicted enzyme with a TIM-barrel fold 171 93 Op 2 6/0.132 + CDS 180825 - 181391 719 ## COG0762 Predicted integral membrane protein 172 93 Op 3 2/0.816 + CDS 181388 - 181678 312 ## COG1872 Uncharacterized conserved protein 173 93 Op 4 13/0.000 + CDS 181686 - 182279 1005 ## PROTEIN SUPPORTED gi|157155704|ref|YP_001464307.1| putative deoxyribonucleotide triphosphate pyrophosphatase 174 93 Op 5 . + CDS 182272 - 183408 984 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 183470 - 183514 3.4 175 94 Tu 1 . - CDS 183650 - 184657 826 ## ECO103_3539 hypothetical protein - Prom 184686 - 184745 4.2 - Term 184734 - 184766 5.4 176 95 Tu 1 . - CDS 184774 - 185820 1296 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 185901 - 185960 6.0 - Term 185940 - 185986 5.1 177 96 Tu 1 . - CDS 185996 - 186712 930 ## ECO111_3709 hypothetical protein - Term 186726 - 186756 3.0 178 97 Op 1 4/0.368 - CDS 186899 - 187225 485 ## COG3171 Uncharacterized protein conserved in bacteria 179 97 Op 2 . - CDS 187225 - 187944 777 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 187977 - 188036 3.6 + Prom 187936 - 187995 2.5 180 98 Op 1 11/0.000 + CDS 188105 - 189157 1089 ## PROTEIN SUPPORTED gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase 181 98 Op 2 6/0.132 + CDS 189185 - 189460 372 ## COG2924 Fe-S cluster protector protein 182 98 Op 3 4/0.368 + CDS 189522 - 190604 1004 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Prom 190641 - 190700 6.1 183 99 Tu 1 . + CDS 190806 - 192062 1407 ## COG0477 Permeases of the major facilitator superfamily + Term 192072 - 192117 12.1 - Term 192066 - 192099 -0.4 184 100 Tu 1 . - CDS 192112 - 194247 1588 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 194366 - 194425 3.8 185 101 Tu 1 . + CDS 194645 - 195352 545 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump + Term 195480 - 195548 30.4 + TRNA 195458 - 195533 84.1 # Phe GAA 0 0 - Term 195537 - 195563 0.1 186 102 Op 1 2/0.816 - CDS 195682 - 196218 461 ## COG3149 Type II secretory pathway, component PulM 187 102 Op 2 4/0.368 - CDS 196220 - 197398 659 ## COG3297 Type II secretory pathway, component PulL 188 102 Op 3 7/0.079 - CDS 197395 - 198372 954 ## COG3156 Type II secretory pathway, component PulK 189 102 Op 4 12/0.000 - CDS 198375 - 198974 498 ## COG4795 Type II secretory pathway, component PulJ 190 102 Op 5 . - CDS 198971 - 199342 333 ## COG2165 Type II secretory pathway, pseudopilin PulG 191 102 Op 6 . - CDS 199339 - 199869 352 ## EC55989_3374 conserved hypothetical protein; putative exported protein 192 102 Op 7 10/0.000 - CDS 199906 - 200361 613 ## COG2165 Type II secretory pathway, pseudopilin PulG 193 102 Op 8 24/0.000 - CDS 200378 - 201601 1195 ## COG1459 Type II secretory pathway, component PulF 194 102 Op 9 6/0.132 - CDS 201601 - 203094 1496 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 195 102 Op 10 . - CDS 203094 - 205154 2179 ## COG1450 Type II secretory pathway, component PulD 196 102 Op 11 . - CDS 205184 - 206143 621 ## COG3031 Type II secretory pathway, component PulC 197 102 Op 12 . - CDS 206161 - 206571 280 ## JW2938 hypothetical protein 198 102 Op 13 . - CDS 206637 - 207446 459 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 199 103 Tu 1 . - CDS 207594 - 212162 4246 ## ECSE_3249 hypothetical protein - Prom 212189 - 212248 2.5 - Term 212599 - 212637 7.1 200 104 Tu 1 . - CDS 212647 - 214329 1674 ## COG1620 L-lactate permease - Prom 214413 - 214472 4.4 - Term 214611 - 214656 -0.9 201 105 Op 1 1/0.947 - CDS 214684 - 216855 2571 ## COG2225 Malate synthase 202 105 Op 2 1/0.947 - CDS 216877 - 217281 588 ## COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 203 105 Op 3 15/0.000 - CDS 217286 - 218509 1053 ## COG0247 Fe-S oxidoreductase 204 105 Op 4 9/0.026 - CDS 218520 - 219572 970 ## COG0277 FAD/FMN-containing dehydrogenases 205 105 Op 5 . - CDS 219572 - 221071 1509 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 221220 - 221279 2.3 + Prom 221184 - 221243 8.2 206 106 Tu 1 . + CDS 221322 - 222086 514 ## COG2186 Transcriptional regulators 207 107 Tu 1 . - CDS 222093 - 223235 967 ## c3711 hypothetical protein - Prom 223434 - 223493 7.0 + Prom 223430 - 223489 8.9 208 108 Op 1 2/0.816 + CDS 223639 - 225327 1194 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 209 108 Op 2 . + CDS 225324 - 226238 726 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 210 108 Op 3 . + CDS 226270 - 226518 252 ## S3224 hypothetical protein 211 108 Op 4 . + CDS 226518 - 227690 1278 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes + Term 227693 - 227739 14.8 - Term 227616 - 227648 1.1 212 109 Op 1 22/0.000 - CDS 227725 - 228804 902 ## COG0795 Predicted permeases 213 109 Op 2 . - CDS 228801 - 229871 1019 ## COG0795 Predicted permeases 214 109 Op 3 . - CDS 229902 - 230462 472 ## COG3054 Predicted transcriptional regulator 215 109 Op 4 . - CDS 230474 - 231298 569 ## EcHS_A3162 hypothetical protein 216 109 Op 5 . - CDS 231298 - 232647 896 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 217 109 Op 6 . - CDS 232693 - 233451 641 ## B21_02809 hypothetical protein 218 109 Op 7 . - CDS 233483 - 234181 309 ## ECO103_3669 hypothetical protein - Prom 234310 - 234369 5.4 + Prom 234287 - 234346 5.7 219 110 Op 1 . + CDS 234370 - 234606 184 ## ECUMN_3470 conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain 220 110 Op 2 . + CDS 234667 - 235062 354 ## SSON_3130 hypothetical protein - Term 235058 - 235104 8.1 221 111 Tu 1 . - CDS 235111 - 236610 1424 ## COG0306 Phosphate/sulphate permeases - Prom 236815 - 236874 5.2 + Prom 236412 - 236471 1.8 222 112 Tu 1 . + CDS 236547 - 236810 109 ## EcSMS35_3273 hypothetical protein + Term 237055 - 237096 1.8 223 113 Tu 1 . - CDS 236902 - 238761 2192 ## COG0754 Glutathionylspermidine synthase - Prom 238956 - 239015 3.1 + Prom 238845 - 238904 2.7 224 114 Tu 1 . + CDS 238966 - 239832 964 ## COG0625 Glutathione S-transferase + Term 239903 - 239955 9.1 Predicted protein(s) >gi|299857060|gb|ADWS01000004.1| GENE 1 3 - 327 150 108 aa, chain - ## HITS:1 COG:tra5_g1 KEGG:ns NR:ns ## COG: tra5_g1 COG2801 # Protein_GI_number: 16128357 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 2 108 42 148 288 214 99.0 2e-56 MRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLLRQGLRAKASR KFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYL >gi|299857060|gb|ADWS01000004.1| GENE 2 444 - 743 279 99 aa, chain - ## HITS:1 COG:b0298 KEGG:ns NR:ns ## COG: b0298 COG2963 # Protein_GI_number: 16128283 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 99 4 102 102 114 100.0 6e-26 MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSS ERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK >gi|299857060|gb|ADWS01000004.1| GENE 3 837 - 1259 139 140 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|256019390|ref|ZP_05433255.1| ## NR: gi|256019390|ref|ZP_05433255.1| hypothetical protein ShiD9_10781 [Shigella sp. D9] # 1 140 1 140 140 273 99.0 3e-72 MTRVVIALLFLAGCTSQMKYSNVVRIRNVCSSDINVFIPEYVFGGNVIKQHHIYLPVNGI DVLSYFYTENINDGFQYEEAFTVNKDSSGNFDYPFVILSSGREKKFGKNDLIELSRDIST KDDKKHGVVKYMIDSQDICP >gi|299857060|gb|ADWS01000004.1| GENE 4 1819 - 3579 1548 586 aa, chain + ## HITS:1 COG:YPO1485 KEGG:ns NR:ns ## COG: YPO1485 COG3519 # Protein_GI_number: 16121758 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 586 1 587 587 874 72.0 0 MDDLTQRYYEAEMRYLREAGKEFAQAYPDRAAMLNLDKPGARDPYVERLFEGFAFLMGSL REKLDDDLPELTEGLVSLLWPHYLRTIPSLSVVELSTDHRQMKQSETLSDFQVLSRPVGE RRTRCFYSATRDITLHPLALPDVSLQYEPDGRSVIRLRFECGPLVGDWSQIDLSRLPFYL NADSPVACALHRALTLGTQQFWLRLPGQDRRTLDAHFSPLGFEDNDRLWPKGESAFSGYQ LLLEYFTFREKFMFVALNGLELVAWPEGITGFEIDVVLNENWPHDLPFDSDNIRLHCVPV INLFPLEADPLHLSPLENEFLLRPMRIQDGHTEIYSVDNIISSRHTGSQAYVPFSSFRHR GGMLRHDAPERYYHTRVKRGPSGLHDTWLILGGDAFDADRMLEDETLSLSLTGTNGHLPR KALQSTLLDRPVHASQNVLRVRNLCAPTQPCYPPARDRFHWRVLSHLGSNFLSMMDNAEI LRGTLALYDWTESEMNRRRLEAIVDVQHSLIQRFERGFLLRGVDIQVTLDSNGFAGEGDI TLFGELLHRFFALYADIHLFTQLTLILQPTGKCLQWTEHHSQRVPG >gi|299857060|gb|ADWS01000004.1| GENE 5 3543 - 4622 686 359 aa, chain + ## HITS:1 COG:YPO1486 KEGG:ns NR:ns ## COG: YPO1486 COG3520 # Protein_GI_number: 16121759 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 342 1 345 361 377 57.0 1e-104 MDRASQPARTGLTDRLAPDIARINFYRFCQLLEQSQQNAPLGSTDNPATDAVRFRPHPGM GFPVSELKNVERDAGNPDVPPTVRTTFLGLYGVDSPLPTAYLDYITQRHDGHDAVMAFLD IFNHRFITQYYRIWRKYNYPASFEAGAMDDISRCLLGLIGLGIPGSENHIATPVSRFLAL LSVMRLPTRTAEGVTALVGLLAPLTKATVVPHDPQPVILPAPAGLSKNSRISLKTRTLLG RTGTDVNSQLLLKLYTEDAAEARGWLPGGQLHSDLLVLLRVYLGWRCQARLQLTLPVSLL PAARLGKQRVQISRTGILRASFAAPATGTVTVSLGRYQGLIPALSIRNRESMTHVSYSF >gi|299857060|gb|ADWS01000004.1| GENE 6 4603 - 5139 591 178 aa, chain + ## HITS:1 COG:YPO1487 KEGG:ns NR:ns ## COG: YPO1487 COG3521 # Protein_GI_number: 16121760 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 19 172 1 157 162 141 47.0 6e-34 MFPIRFKRPALLCMAMLTVVLSGCGLIQKVVDESKSVASAVFYKQIKILHLDFFSRSALN TDAEDTPLSTMVHVWQLKTREDFDKADYDTLFMQEEKTLEKDVLAKHTVWVKPEGTASLN VPLDKETQFVAIIGQFYHPDEKSDSWRLVIKRDELEADKPRSIELMRSDLRLLPLKDK >gi|299857060|gb|ADWS01000004.1| GENE 7 5143 - 5571 427 142 aa, chain + ## HITS:1 COG:YPO1488 KEGG:ns NR:ns ## COG: YPO1488 COG3518 # Protein_GI_number: 16121761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 138 5 141 150 150 59.0 7e-37 MSTPSLYEMLTFSFSGELPLEQVSERDQLILSVMDNMQRIINCRAGTLAHLPDYGLPDLS LIHQGMVAGIHGLMRQIEETLLRYEPRLSQIQVELLPQPRPGYLNYLIHAQLPDTGWIRF DGVFSPEGRIVLRHLKQQERAY >gi|299857060|gb|ADWS01000004.1| GENE 8 5571 - 6947 799 458 aa, chain + ## HITS:1 COG:YPO1489 KEGG:ns NR:ns ## COG: YPO1489 COG3515 # Protein_GI_number: 16121762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 14 450 12 449 455 254 39.0 4e-67 MASNANFISQFVMGGDPCTYKESGELQAEMSKLTHPARPDVDWRRVEKLSLALFRQNGVE LQTQVCYVLAITRRQGLAGMADGLGSLDILLQRWADFWPVQVHSRISLLSWVTEKMQQAL RTLDIQYQDLPQIYRCVQHLSAIETTLQQCELWHMTKLDVLAGQFRNTALRLERLAPQGA ETTITPPELPRREMKQPEKSEESPQPVFATRPAQQNDKDASPSAPSPEISRQRTWPIFMA GMVVMACLGGTGLWGWSQLNQPDALIQRIQLSVMPLPQSLESGELAKLDVKDKALLAQDR TIAASQMQLEQLNKLPARWPLEQGYRQLRQLDALWPDNPQVRALNAQWRKQRELSALSTE ALNGYAQAQSQLQRLSAQLDALDERKGRYLTGSELKTAVYGIRQSLKEPPLEELLRQLEE QKQTGEVSPTLLTQIDTRLNQLLNRYVILLDTKVEQSQ >gi|299857060|gb|ADWS01000004.1| GENE 9 7012 - 7560 -30 182 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3136 NR:ns ## KEGG: EcE24377A_3136 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 182 1 182 182 330 100.0 2e-89 MYKKERNRPFETREEVLAYHKREKIPCLECGKLLIFLPRHIWFVHGIRADEYRVKWNIPK HIALAGISYLEKQSEYMKARIAKGKLDPAEQIAMMRIKGRQLKSDPDWRNRSGSILKKQY ARRDILKNRVWERSPSIKSVSVELKTEAIRRMKNRKVVGEKVQDIADDLNVSISRLYHWL KM >gi|299857060|gb|ADWS01000004.1| GENE 10 7906 - 9249 1321 447 aa, chain - ## HITS:1 COG:ECs3674 KEGG:ns NR:ns ## COG: ECs3674 COG0860 # Protein_GI_number: 15832928 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 838 100.0 0 MTDYASFAKVSGQISRLLVTQLRFLLLGRGMSGSNTAISRRRLLQGAGAMWLLSVSQVSL AAVSQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQ IRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDM QDPLLALLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTR EKDVVLQIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFT SRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIA DSLKFGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTAT FQQEVAESILAGIKAYFADGATLARRG >gi|299857060|gb|ADWS01000004.1| GENE 11 9391 - 10722 1295 443 aa, chain + ## HITS:1 COG:ECs3675_1 KEGG:ns NR:ns ## COG: ECs3675_1 COG0548 # Protein_GI_number: 15832929 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 291 1 291 291 581 100.0 1e-166 MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSSIVNDIGLLHSLGIRLV VVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAGTLQLDITARLSMSLNNTP LQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDAIHRQLDSGAIVLMGPVAVSV TGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDDGDIVSELFPNEAQARVEAQEEK GDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGALLQELFSRDGIGTQIVMESAEQIRR ATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDNTTIACAALYPFPEEKI GEMACVAVHPDYRSSSRGEVLLERIAAQAKQSGLSKLFVLTTRSIHWFQERGFTPVDIDL LPESKKQLYNYQRKSKVLMADLG >gi|299857060|gb|ADWS01000004.1| GENE 12 10784 - 12610 1379 608 aa, chain - ## HITS:1 COG:recD KEGG:ns NR:ns ## COG: recD COG0507 # Protein_GI_number: 16130723 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Escherichia coli K12 # 1 608 1 608 608 1161 99.0 0 MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLEN NEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVA RFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTT VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTL HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQ LASVEAGAVLGDICAYANAGFTAERAGQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYR FGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLD LLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGR PVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHK SQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGL AALFSSRE >gi|299857060|gb|ADWS01000004.1| GENE 13 12610 - 16152 3090 1180 aa, chain - ## HITS:1 COG:recB KEGG:ns NR:ns ## COG: recB COG1074 # Protein_GI_number: 16130724 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Escherichia coli K12 # 1 1180 1 1180 1180 2266 98.0 0 MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL VVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQ MDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIA LVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAV GELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEETNSYQLPESLEKFSQRFLEDRTKA GGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDS ALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIY AFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKS AGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALL MNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLL QAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPM LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDS NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDL NAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGR LLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDKQPWQVNDALTAELNARTLQRLPGDN WRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFE DLDFTQPVDPNWVQEKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLNQLSDRDKQVE MEFYLPISEPLIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLD YKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIY LFLRGVDKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA >gi|299857060|gb|ADWS01000004.1| GENE 14 16145 - 19033 2767 962 aa, chain - ## HITS:1 COG:ptr KEGG:ns NR:ns ## COG: ptr COG1025 # Protein_GI_number: 16130725 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Secreted/periplasmic Zn-dependent peptidases, insulinase-like # Organism: Escherichia coli K12 # 1 962 1 962 962 1847 99.0 0 MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQYQAIRLDNGMVVLLVSD PQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNA STAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMR MAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKP LPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNS AKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDK GLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMI RVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDK ISAQTFADWQKKAADIALSLPELNPYIPDAFSLIKSEKKYDHPELIVDESNLRVVYAPSR YFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANN GLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMP AQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEDQATTLARDV QKQLGADGSEWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLG QIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAE AKLRAMKPEEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLL TPQKLADFFHQAVVEPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEK NE >gi|299857060|gb|ADWS01000004.1| GENE 15 19208 - 22576 2894 1122 aa, chain - ## HITS:1 COG:recC KEGG:ns NR:ns ## COG: recC COG1330 # Protein_GI_number: 16130726 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Escherichia coli K12 # 1 1122 1 1122 1122 2220 99.0 0 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLDREDFTLLRHYLTDDSD KRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL ASWGKLGRDYIYLLSDLESSQELDAFVDVMPDNLLHNIQSDILELENRAVAGVNIEEFSR SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS >gi|299857060|gb|ADWS01000004.1| GENE 16 22589 - 22912 120 107 aa, chain - ## HITS:1 COG:ppdC KEGG:ns NR:ns ## COG: ppdC COG4967 # Protein_GI_number: 16130727 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilV # Organism: Escherichia coli K12 # 1 107 1 107 107 179 99.0 8e-46 MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASRNQYQQLWQHGWQQTQL RAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNRQ >gi|299857060|gb|ADWS01000004.1| GENE 17 22897 - 23304 215 135 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3383 NR:ns ## KEGG: ECO103_3383 # Name: ygdB # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 135 1 135 135 223 100.0 2e-57 MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQSLRRQAIVQSALAWGKM HSWQTQPAVQCSQYAGTDAQVCLRLLADNEALLIAGYEGVSLWRTGEVIDGNIVFSPRGW SDFCPLKERALCQLP >gi|299857060|gb|ADWS01000004.1| GENE 18 23301 - 23864 626 187 aa, chain - ## HITS:1 COG:ppdB KEGG:ns NR:ns ## COG: ppdB COG4795 # Protein_GI_number: 16130729 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Escherichia coli K12 # 1 187 1 187 187 375 97.0 1e-104 MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRKLALEDEIWLRVFTVAK HLQRAGYCHGSCTGEGLEIVGQGDCIIVQWDANSNGIWDREPVKESDQIGFRLKEHVLET LRGAASCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMRAASKSEPQTVVDASY SVTGFNL >gi|299857060|gb|ADWS01000004.1| GENE 19 23855 - 24325 171 156 aa, chain - ## HITS:1 COG:ppdA KEGG:ns NR:ns ## COG: ppdA COG2165 # Protein_GI_number: 16130730 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 1 156 1 156 156 292 99.0 1e-79 MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWH NRDHSISVIREGTLWCLVSSVAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTA WAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL >gi|299857060|gb|ADWS01000004.1| GENE 20 24510 - 25304 842 264 aa, chain - ## HITS:1 COG:ECs3684 KEGG:ns NR:ns ## COG: ECs3684 COG0207 # Protein_GI_number: 15832938 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 567 100.0 1e-162 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF DYRFEDFEIEGYDPHPGIKAPVAI >gi|299857060|gb|ADWS01000004.1| GENE 21 25311 - 26186 1050 291 aa, chain - ## HITS:1 COG:ECs3685 KEGG:ns NR:ns ## COG: ECs3685 COG0682 # Protein_GI_number: 15832939 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Escherichia coli O157:H7 # 1 291 1 291 291 548 100.0 1e-156 MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENL LYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRT KRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTN PQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRI IVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS >gi|299857060|gb|ADWS01000004.1| GENE 22 26337 - 28583 2112 748 aa, chain - ## HITS:1 COG:ECs3686 KEGG:ns NR:ns ## COG: ECs3686 COG3605 # Protein_GI_number: 15832940 # Func_class: T Signal transduction mechanisms # Function: Signal transduction protein containing GAF and PtsI domains # Organism: Escherichia coli O157:H7 # 1 748 1 748 748 1434 99.0 0 MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKK PRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQ LLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLTALFGQYRQTRIRALPAAPGV AIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAA IFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVIEKFAEQFAALSDNYLKERAGDLRA LGQRLLFHLDDANQGPNAWPERFILVADELSATTLAELPQDRLVGVVVRDGAANSHAAIM VRALGIPTVMGADIQPSVLHRRTLIVDGYRGELLVDPEPVLLQEYQRLISEEIELSRLAE DDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVR AMLRANAATGNLNILLPMVTSLDEVDEARRLIERAGREVEEMIGYEIPKPRIGIMLEVPS MVFMLPHLAKRVDFISVGTNDLTQYILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEI HGIDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRRIDYADAENLAQRSLE AQLATEVRHQVAAFMERRGMGGLIRGGL >gi|299857060|gb|ADWS01000004.1| GENE 23 28596 - 29126 290 176 aa, chain - ## HITS:1 COG:ECs3687 KEGG:ns NR:ns ## COG: ECs3687 COG0494 # Protein_GI_number: 15832941 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 340 100.0 1e-93 MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPE FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG >gi|299857060|gb|ADWS01000004.1| GENE 24 29479 - 29625 62 48 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3390 NR:ns ## KEGG: ECO103_3390 # Name: ygdT # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 48 1 48 48 95 100.0 5e-19 MLSTESWDNCEKPPLLFPFTALTCDETPVFSGSVLNLVAHSVDKYGIG >gi|299857060|gb|ADWS01000004.1| GENE 25 29811 - 30500 695 229 aa, chain + ## HITS:1 COG:ECs3688 KEGG:ns NR:ns ## COG: ECs3688 COG3066 # Protein_GI_number: 15832942 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair protein # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 432 100.0 1e-121 MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENLKRDKGWIGVLLEIWLG ASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRV LWIPVEGERSIPLAQRRVGSPLLWSPNEEEDRQLREDWEELMDMIVLGQVERITARHGEY LQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFTSALLARHFLIQ >gi|299857060|gb|ADWS01000004.1| GENE 26 30569 - 31282 760 237 aa, chain + ## HITS:1 COG:ECs3689 KEGG:ns NR:ns ## COG: ECs3689 COG0861 # Protein_GI_number: 15832943 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 381 100.0 1e-106 MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMR LALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKT RVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDFVE RHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLNLIRNKKNPL >gi|299857060|gb|ADWS01000004.1| GENE 27 31420 - 31638 268 72 aa, chain + ## HITS:1 COG:no KEGG:G2583_3488 NR:ns ## KEGG: G2583_3488 # Name: ygdR # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 72 1 72 72 132 100.0 4e-30 MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDDDTGLVSYHDQQGNAMQ INRDDVSQIIER >gi|299857060|gb|ADWS01000004.1| GENE 28 31746 - 32786 1147 346 aa, chain + ## HITS:1 COG:tas KEGG:ns NR:ns ## COG: tas COG0667 # Protein_GI_number: 16130738 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 346 1 346 346 699 100.0 0 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN ETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGT LTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQP FVASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQVYTYPAP >gi|299857060|gb|ADWS01000004.1| GENE 29 32818 - 34011 1352 397 aa, chain - ## HITS:1 COG:ygeD KEGG:ns NR:ns ## COG: ygeD COG0477 # Protein_GI_number: 16130739 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 397 1 397 397 642 100.0 0 MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVG AYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAK YGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVA NIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFS LQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLG IYSLAVMIGIPVVPIGIGFGALFALAITALWIWQRRH >gi|299857060|gb|ADWS01000004.1| GENE 30 34004 - 36163 2024 719 aa, chain - ## HITS:1 COG:ECs3693_2 KEGG:ns NR:ns ## COG: ECs3693_2 COG0318 # Protein_GI_number: 15832947 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 196 719 1 524 524 1067 99.0 0 MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTS ISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDG AGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVAMPDAPRARD RRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTK TLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRIPAMMNYTAGVKGLTSAITA AEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQV KQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFG LTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYR LRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGM DARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVR FDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFT TDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE >gi|299857060|gb|ADWS01000004.1| GENE 31 36749 - 37780 918 343 aa, chain + ## HITS:1 COG:galR KEGG:ns NR:ns ## COG: galR COG1609 # Protein_GI_number: 16130741 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 343 1 343 343 658 99.0 0 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE TVGLIVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV VHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA ELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD >gi|299857060|gb|ADWS01000004.1| GENE 32 37787 - 39049 1207 420 aa, chain - ## HITS:1 COG:lysA KEGG:ns NR:ns ## COG: lysA COG0019 # Protein_GI_number: 16130742 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Escherichia coli K12 # 1 411 1 411 420 833 100.0 0 MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIH ILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVN AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR HHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVD TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDA GFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRA LPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL >gi|299857060|gb|ADWS01000004.1| GENE 33 39171 - 40106 684 311 aa, chain + ## HITS:1 COG:lysR KEGG:ns NR:ns ## COG: lysR COG0583 # Protein_GI_number: 16130743 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 311 1 311 311 575 99.0 1e-164 MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHP TVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARY PDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEVCVLPPGHPLAV KKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGVGV SVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSEHLQAGLPKLVTS LDAILSSATTA >gi|299857060|gb|ADWS01000004.1| GENE 34 40093 - 40785 709 230 aa, chain - ## HITS:1 COG:ECs3697 KEGG:ns NR:ns ## COG: ECs3697 COG1794 # Protein_GI_number: 15832951 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 457 100.0 1e-129 MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVDFHEIEECQRRGEWDKT GDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFLHIADATGRAITGAGMTRV ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ VIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAAIHAEDAVAFMLS >gi|299857060|gb|ADWS01000004.1| GENE 35 40914 - 42272 1293 452 aa, chain - ## HITS:1 COG:ECs3698 KEGG:ns NR:ns ## COG: ECs3698 COG0477 # Protein_GI_number: 15832952 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 452 21 472 472 817 100.0 0 MNMFVSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNG WLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEM ASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPN SPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVF LGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDK AGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVV WILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVG ITFWLIPETKNVTLEHIERKLMAGEKLRNIGV >gi|299857060|gb|ADWS01000004.1| GENE 36 42647 - 43408 750 253 aa, chain - ## HITS:1 COG:kduD KEGG:ns NR:ns ## COG: kduD COG1028 # Protein_GI_number: 16130746 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 253 1 253 253 492 99.0 1e-139 MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIKQVTALGRRFL SLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSV FFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHN INVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVN GYTIAVDGGWLAR >gi|299857060|gb|ADWS01000004.1| GENE 37 43438 - 44274 651 278 aa, chain - ## HITS:1 COG:kduI KEGG:ns NR:ns ## COG: kduI COG3717 # Protein_GI_number: 16130747 # Func_class: G Carbohydrate transport and metabolism # Function: 5-keto 4-deoxyuronate isomerase # Organism: Escherichia coli K12 # 1 278 1 278 278 580 99.0 1e-165 MDVRQSIHSAHAKTLDTQGLRNEFLVEEVFVADEYTMVYSHIDRIIVGGIMPITKTVSVG GEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDT ATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNRRTINKYFVPDVLETCQLSMG LTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQPQETRHIVMHNEQAVISP SWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKDLR >gi|299857060|gb|ADWS01000004.1| GENE 38 44561 - 45742 1000 393 aa, chain - ## HITS:1 COG:yqeF KEGG:ns NR:ns ## COG: yqeF COG0183 # Protein_GI_number: 16130748 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 393 2 394 394 717 99.0 0 MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAG AGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAIQCGEADIVIAGGQENMSR APHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVTAENLAREYGISRQLQDAYAL SSQQKARAAIDAGRFKDEIVPVMIQSNGQTLVVDTDEQPRTDASAEGLARLNPSFDSLGS VTAGNASSINDGAAAVMMMSEAKARALNLPVLARIRAFASVGVDPALMGIAPVYATRRCL ERVGWQLADVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVS LVHEMVKRNARKGLATLCIGGGQGVALTIERDE >gi|299857060|gb|ADWS01000004.1| GENE 39 45997 - 47226 404 409 aa, chain + ## HITS:1 COG:ECs3702 KEGG:ns NR:ns ## COG: ECs3702 COG0814 # Protein_GI_number: 15832956 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 409 1 409 409 707 100.0 0 MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQ FILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHM VIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLIAYFLFLSIYLVGSWQPDLL TTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLI ICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKS FLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYA ISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGILCVSVMFFS >gi|299857060|gb|ADWS01000004.1| GENE 40 47800 - 48318 220 172 aa, chain + ## HITS:1 COG:yqeH KEGG:ns NR:ns ## COG: yqeH COG2771 # Protein_GI_number: 16130750 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli K12 # 1 172 59 230 230 345 99.0 2e-95 MWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVL VSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFT IMGYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGGKINELFIRSHSVQH >gi|299857060|gb|ADWS01000004.1| GENE 41 49126 - 49461 204 111 aa, chain + ## HITS:1 COG:ECs3704 KEGG:ns NR:ns ## COG: ECs3704 COG3710 # Protein_GI_number: 15832958 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Escherichia coli O157:H7 # 1 110 159 268 269 238 100.0 1e-63 MLSAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRIL DSGINCKKYPWLYFPLAKSSPGMIVMACNKNYNQHEVAGCLTLSYREVNRD >gi|299857060|gb|ADWS01000004.1| GENE 42 49454 - 49936 62 160 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3408 NR:ns ## KEGG: ECO103_3408 # Name: yqeJ # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 160 1 160 160 310 98.0 8e-84 MIDYNKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMFNK KNKTGTVALSGTWQQGNRESKSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLE QLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR >gi|299857060|gb|ADWS01000004.1| GENE 43 50085 - 50510 130 141 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_3178 NR:ns ## KEGG: ECUMN_3178 # Name: yqeK # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 141 1 141 141 226 97.0 3e-58 MDIEFSQIHEMVYMHDIVNSDSKKKPRIPLKKFLNAEKVLTQTTSWALNSRFVNVNSVNK VNVKSKVKSSYISRSVNDEFSLTDDEINSFKETLILSSIDSLSKLVLNNPLSVLFTSTVR RNNNRAKMNVEFDSWICTRCC >gi|299857060|gb|ADWS01000004.1| GENE 44 50704 - 51141 92 145 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3127 NR:ns ## KEGG: EC55989_3127 # Name: ygeF # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 145 1 145 145 236 100.0 1e-61 MKPRNINNSLPLQPLVPDQENKNKKNEEKSVNPVKITMGSGLNYIEQESLGGKYLTHDLS IKIADISEEIIQQAILSAMSIYKFSITDDLMSMAVNELIKLTKIENNVDLNKFTTICTDV LSPRVTRHNKEKKQTTFYPSQKSPF >gi|299857060|gb|ADWS01000004.1| GENE 45 51419 - 51910 289 163 aa, chain + ## HITS:1 COG:ygeG KEGG:ns NR:ns ## COG: ygeG COG0457 # Protein_GI_number: 16130755 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli K12 # 1 163 1 163 163 293 99.0 8e-80 MSTETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIYAYAFDYHEKGNITDAE IYYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYNYSPYDDYSVIYRMGQCQI GAKNIDNAMQCFYHIINNCEDDSVKSKAQAYIELLNDNSEDNG >gi|299857060|gb|ADWS01000004.1| GENE 46 52245 - 53621 -5 458 aa, chain + ## HITS:1 COG:ygeH_2 KEGG:ns NR:ns ## COG: ygeH_2 COG0457 # Protein_GI_number: 16130756 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli K12 # 114 458 1 345 345 672 99.0 0 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL FEQAKIHPTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP NPLKNNIKLYYKETESESHRVIIDNILKLNQLTRICMR >gi|299857060|gb|ADWS01000004.1| GENE 47 53789 - 54007 163 72 aa, chain + ## HITS:1 COG:no KEGG:JW5456 NR:ns ## KEGG: JW5456 # Name: ygeI # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 72 1 72 72 120 100.0 2e-26 MTNPIGINNLSQSSNIANATGDEVVSLDKHINTSATDTDQIQAFIVSTWMAPFQNDMYSE DNPISPYYKIEW >gi|299857060|gb|ADWS01000004.1| GENE 48 54074 - 54262 106 62 aa, chain - ## HITS:1 COG:no KEGG:ECSE_3112 NR:ns ## KEGG: ECSE_3112 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 62 11 72 72 91 100.0 8e-18 MLSFFRLLSTRAIALIKFGSILNIVPASLEQELLAKDIFVINIQNVKMVKNLTFGERIFF HV >gi|299857060|gb|ADWS01000004.1| GENE 49 54330 - 54566 79 78 aa, chain + ## HITS:1 COG:pbl KEGG:ns NR:ns ## COG: pbl COG0741 # Protein_GI_number: 16130758 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli K12 # 1 78 61 138 138 166 98.0 1e-41 MHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQK KRQQYAPKYTLYIPGLMN >gi|299857060|gb|ADWS01000004.1| GENE 50 54611 - 55054 75 147 aa, chain - ## HITS:1 COG:ECs3712 KEGG:ns NR:ns ## COG: ECs3712 COG2197 # Protein_GI_number: 15832966 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 147 64 210 210 295 99.0 2e-80 MGSELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR LNIMKKLDVHSGIELIKTALRMGVCTI >gi|299857060|gb|ADWS01000004.1| GENE 51 55088 - 55243 111 51 aa, chain - ## HITS:1 COG:ECs3712 KEGG:ns NR:ns ## COG: ECs3712 COG2197 # Protein_GI_number: 15832966 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 51 1 51 210 105 98.0 1e-23 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTA >gi|299857060|gb|ADWS01000004.1| GENE 52 55464 - 55895 140 143 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3135 NR:ns ## KEGG: EC55989_3135 # Name: ygeM # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 143 1 143 143 270 99.0 1e-71 MINDLKSILLKSSEEVDVFIKIFESWRKKLPAISGPVNLYIPTRFKDKYLEVESYFVDKS IWNVHITFHDDKRFVFFTDQFIAEFSPQEFVDNCEQYLINNHCFSPDKVNEICEQARHYL VEKMFETHSLDMNNSVLARPEDL >gi|299857060|gb|ADWS01000004.1| GENE 53 56084 - 56692 -76 202 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3419 NR:ns ## KEGG: ECO103_3419 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 178 1 178 193 343 99.0 2e-93 MNLALRKIIYDPISYIHPQRVSLNNTPINNPVLRSITNEMIVLQYNLSVEHFNLNSSLIY YINNWNLFPLFCLFSGYHFYRERFAERGFFYKVPAVLRDYLSAIPVKINEKARYKPGIAS YHNIITCGFSTLSPYIRQQPLAMQQRFNLLFPDFVDHIQLPLPLASTLLEIITFYAKKIE MSLIKSPANGVVIKRKISDGLK >gi|299857060|gb|ADWS01000004.1| GENE 54 56708 - 57442 80 244 aa, chain - ## HITS:1 COG:ECs3716 KEGG:ns NR:ns ## COG: ECs3716 COG4669 # Protein_GI_number: 15832970 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type III secretory pathway, lipoprotein EscJ # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 450 98.0 1e-126 MKYISLLLFILLLCGCKQQELLNHLDQQQANDVLAVLQRHNINAEKKDQGKTGFSIFVEP TDFASAVDWLKIYNLPGKPDIQISQMFPADALVSSPRAEKARLYSAIEQRLEQSLKIMDG IISSRVHVSYDVDNGDSGKTALPIHISVLAVYEKDINPEIKINDIKRFIVNSSASVQYEN ISVVLSKRRDIIEQAPTYEISEPVFAYDKAMPVSILLALISVATCWLLWKYRAILTNLVR LKIK >gi|299857060|gb|ADWS01000004.1| GENE 55 57483 - 57770 241 95 aa, chain - ## HITS:1 COG:no KEGG:EcolC_0853 NR:ns ## KEGG: EcolC_0853 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ATCC8739 # Pathway: not_defined # 1 93 1 93 110 160 98.0 1e-38 MSVSNMPPIDRAEQSTAHEIQQAKVIDLNDRVLNLDNPDDKMISAFANYAVQTENWQQNA LQALRSDKEGLTPEKLLVLQDHVLNYNVEVSLVEH >gi|299857060|gb|ADWS01000004.1| GENE 56 58044 - 59225 339 393 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3424 NR:ns ## KEGG: ECO103_3424 # Name: not_defined # Def: type III secretion protein EprH # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 393 1 393 393 739 99.0 0 MENNDKFLSQDLLESYAIRLLSGPLNGCEYEILNGRLLVIIGNDVSLGRSDAFSELPENT IVVPYGELTGSFEIIITTDPDLVVTFRELTAQEPEDRTLTLNQQIEVLGLKFAVKEKNEV WQYSLPGIIENNIISTKQHFFNSKLFKYVMLFFLFAIIFIAFYIVNASNDPQLRHIDKIL VNKNRNYEVLYGRDHVIYINTNILDEAVWVKQALEKNQPGKPVRVINPDDESIRIFSWLA DNFPDLQYFKLQLLDASNLRLTVSKQRNAITQQLIDNLIKGLLQTMPYASNISIAVLDDN VLESQAIETLSAIGLSYEKYKTANNVYFNIIGTLSDSELNKINNYVDEYYKQWGKQYVRF NVNLKNQDTNNSSFSYGDNRFEKSQGSNWTFQE >gi|299857060|gb|ADWS01000004.1| GENE 57 59483 - 59983 143 166 aa, chain + ## HITS:1 COG:ECs3720 KEGG:ns NR:ns ## COG: ECs3720 COG2771 # Protein_GI_number: 15832974 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 305 98.0 3e-83 MQVFSSDVYFTVGTNALLASQKEYYSDLVALVDLGHSFVVIDEHQHRNLKPNTEPVNILL SNNFIRINKNITLSDLTHFLVSNLHTQNVYSTQEPLTHDEIDILRLCVSYSLKQIAIIKG IDYKTVSYHKIRALNKLNIKGTVELFIALCEWDKHYVKLQSCVRES >gi|299857060|gb|ADWS01000004.1| GENE 58 59985 - 60278 67 97 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3142 NR:ns ## KEGG: EC55989_3142 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 97 1 97 97 159 95.0 4e-38 MSLVGYNSKIIITIALISLLSACTRENSLKENQNKRSGESQAIVDARQFFSEHPEYISSA ELEQNLYREFAQVTTVPAYKEMSMYQLLIISQDRLTH >gi|299857060|gb|ADWS01000004.1| GENE 59 60339 - 60701 162 120 aa, chain - ## HITS:1 COG:ECs3721 KEGG:ns NR:ns ## COG: ECs3721 COG1377 # Protein_GI_number: 15832975 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Escherichia coli O157:H7 # 1 120 254 373 373 229 95.0 8e-61 MIANPTHIAIGIYFKPHLSTIPLISVRETNEVALAVRKYAKEIGIPIITDKKLARKIYAT HRRYDYVSFENIDEILRLLLWLEDVENAGQPVPDEQLSSEDKFIEGEDTKIENKDDNLKN >gi|299857060|gb|ADWS01000004.1| GENE 60 60728 - 60931 60 67 aa, chain - ## HITS:1 COG:ECs3721 KEGG:ns NR:ns ## COG: ECs3721 COG1377 # Protein_GI_number: 15832975 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Escherichia coli O157:H7 # 1 59 177 235 373 114 100.0 4e-26 MLFLLILYCLGSMIIVLIFDFIAEYFLFMKDMKMDKQEVKREYKEQEGNPEIKSKRRERI RKFFLSN >gi|299857060|gb|ADWS01000004.1| GENE 61 60892 - 61458 187 188 aa, chain - ## HITS:1 COG:ECs3721 KEGG:ns NR:ns ## COG: ECs3721 COG1377 # Protein_GI_number: 15832975 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Escherichia coli O157:H7 # 1 151 1 151 373 280 92.0 2e-75 MANKTEKPTQKKLQDASKKGQILKSRDLTISVIMLVGTLYLGYVFDVHHIMSILEYILDH NAKPNIWDYFKAMGVGWLKTNIPFLLVCMFTTILVSWFQSKMQLATEAVKFKFDSLNPVN GLKRIFGLKTVKEFVKAILYIVFLHWRSKYFGVIINHCFLKLLMEISYLYYQIGERCYSF SYCIVSAV >gi|299857060|gb|ADWS01000004.1| GENE 62 61467 - 61703 145 78 aa, chain - ## HITS:1 COG:ECs3722 KEGG:ns NR:ns ## COG: ECs3722 COG4791 # Protein_GI_number: 15832976 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type III secretory pathway, component EscT # Organism: Escherichia coli O157:H7 # 1 78 1 78 78 113 98.0 1e-25 MTHTIVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTVKSALAFLILIIYFAPILAE RVMPLSFFPEQLQLYIEK >gi|299857060|gb|ADWS01000004.1| GENE 63 62236 - 62496 159 86 aa, chain - ## HITS:1 COG:ECs3724 KEGG:ns NR:ns ## COG: ECs3724 COG4794 # Protein_GI_number: 15832978 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type III secretory pathway, component EscS # Organism: Escherichia coli O157:H7 # 1 86 1 86 86 149 100.0 2e-36 MDDIVFAGNRALYLILVMSAGPIAVATFVGLLVGLFQTVTQLQEQTLPFGVKLLCVSICF FLMSGWYGEKLYSFGIEMLNLAFARG >gi|299857060|gb|ADWS01000004.1| GENE 64 62506 - 63171 113 221 aa, chain - ## HITS:1 COG:ECs3725 KEGG:ns NR:ns ## COG: ECs3725 COG4790 # Protein_GI_number: 15832979 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type III secretory pathway, component EscR # Organism: Escherichia coli O157:H7 # 1 221 1 221 221 351 99.0 7e-97 MSNSISLIAILSLFTLLPFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLS MFVMMPVGKEIYNNSQNENLSFNNVASVVNFVETGMSGYKSYLIKYSEPELVSFFEKIQK VNSSEDNEEIIDDDNISIFSLLPAYALSEIKSAFIIGFYIYLPFVVVDLVISSVLLTLGM MMMSPVTISTPIKLILFVAMDGWTMLSKGLILQYFDLSINP >gi|299857060|gb|ADWS01000004.1| GENE 65 63161 - 63502 365 113 aa, chain - ## HITS:1 COG:ECs3726 KEGG:ns NR:ns ## COG: ECs3726 COG1886 # Protein_GI_number: 15832980 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar motor switch/type III secretory pathway protein # Organism: Escherichia coli O157:H7 # 1 113 216 328 328 210 94.0 5e-55 MADHFEYEEDFETDDFDIKKNESEIYDENDDQMINSFEDLPVKIEFVLGKKIMNLYEIDE LCAKRIISLLPESEKNIKIRVNGALTGYGELVEVDDKLGVEIHSWLSGNNNVK >gi|299857060|gb|ADWS01000004.1| GENE 66 64240 - 65454 576 404 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3151 NR:ns ## KEGG: EC55989_3151 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 404 147 550 550 791 100.0 0 MALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGVPGQMNVVHIRFDSN SPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAIDTDTINAEDWQKGDRLKSVALLIAY LDKANFYVMEDSGAWEEDARLNTSSVALVTSGLERLSNLLSKKDSVFVSDLLREAKANEL DEPLSTTRLNHLIDKGYERITLQLDLGGESPGYLEKDKHYREADAALLNVIYPANLAKIN TRRKEQVLKIVKKLAGPYGIKRYEKDNYQSANFWFNDIKTDTDQNSHAKREKSFIPSTEA EWFFDSWYAKSAAIVYKESRKEEYLNDSVQFMNRSLAQITGENMIGANGRSVPEMALPES YNYIHKSGTLHEAPSPIIPLNWSKASMTLMLKEMSNLINDEGIK >gi|299857060|gb|ADWS01000004.1| GENE 67 65479 - 65850 142 123 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_2983 NR:ns ## KEGG: ECIAI1_2983 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 123 15 137 550 244 100.0 8e-64 MKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRL LIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHY DAV >gi|299857060|gb|ADWS01000004.1| GENE 68 66524 - 67513 825 329 aa, chain - ## HITS:1 COG:no KEGG:S3059 NR:ns ## KEGG: S3059 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 329 1 329 329 627 98.0 1e-178 MNMTKNAFQFGIEPVHITDNDNLQVNEGLPTNADPQVYALQLAKTVKAMLNGVLKDAQDN IPFPVEVLPTRNSLPTPIIAHTLADRSVLVPVRGGKRPEVVTAPSGTEITVEPIEQAILV SHQTKLWDQKSTTGFTQGTLQQDALNICDNVVRTINSKMVDVLESSKLLKTVELPALTGS LTAKADAIMDALYENTESSFGSEVSDYGIIAHESHLKALSRLAAKQGFGGEDAIVDMLGT DVAYYNGEDRGVFMMAKRFTALSFGCFRHDGENITVVLSRDGDSQSHDLEILGKVFVVAE AATTIKMGTGSATAVLPVVKRLSFTKEAN >gi|299857060|gb|ADWS01000004.1| GENE 69 67597 - 68088 544 163 aa, chain - ## HITS:1 COG:no KEGG:S1728 NR:ns ## KEGG: S1728 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 163 1 163 163 280 95.0 2e-74 MLFNNNDWKLSVTDINLYENTVSLDGQPYPLSLAIKTLIPGYLSGLPSTSREAMELLEAL AEAGVTIGNFFSNDLMTAYGRRQQNKRVEAERIAKEQRIQADRMREENMTDEEWQKELQR REQVKAERRTYGENLRSATHSAGRSRAAIVADLESGGNWMDSL >gi|299857060|gb|ADWS01000004.1| GENE 70 68211 - 68387 204 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|213027127|ref|ZP_03341574.1| ## NR: gi|213027127|ref|ZP_03341574.1| hypothetical protein Salmonelentericaenterica_33804 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] # 1 58 1 58 58 97 98.0 2e-19 MMIDPRTPEGRMTLRYRGYRTEVILKELGLDPEDGTRQHQSRDELIAQLVAMKLSPNR >gi|299857060|gb|ADWS01000004.1| GENE 71 68389 - 69117 437 242 aa, chain - ## HITS:1 COG:no KEGG:ECO26_3950 NR:ns ## KEGG: ECO26_3950 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 242 1 242 242 474 97.0 1e-132 MSQQEISVINLDQLVSMTSVEIAELTGKEHRNVLRDIRNMAEELNALKTEQCSKLSSHIG VTEDVYLNAQGKQQPLYRLDRKHTFILVAGYSVHLRAKCYDHIQTLERRVLQLEDQKKRA AIQSANRRGVTWGDYCKTYGLPAQKLMTALLQHRGLFRKNPISNEWSVNPKYSDCFRIIK PSDQKFSAGGYNFRFNAKGLEVFGKPEMVDKMRGILIAFTGTDQQKQEHLLKLAQSGKVE GI >gi|299857060|gb|ADWS01000004.1| GENE 72 69635 - 69853 82 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVSSSLLVRLKAPTSDTTGLTSLSFRLSTNGWQTSAMMSWFFSYPRSDYHRANLKSDVVY CSPPVKREDSLR >gi|299857060|gb|ADWS01000004.1| GENE 73 70041 - 70700 265 219 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E3301 NR:ns ## KEGG: SbBS512_E3301 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 8 219 1 212 212 404 91.0 1e-111 MAEYYPAVFEAEAFNCPHCGVYARQFWRRMYGSARELAQRTTEFRMSTCSHCGDDAYWYD GNMIIPAAGNVELPNPDMPDNCKSDYMEARSIINLSPKGAAALLRLCLQKLMVHLGEPGE NINKDIRSLVQKGLPVRIQQAADICRIVGNQAVHPGEISLDDDPQLAHGLFKLLNIIVDD RITRPKEIEAMFQSMPEGPRQGIENQDRQAREQQQAANE >gi|299857060|gb|ADWS01000004.1| GENE 74 70693 - 72324 830 543 aa, chain - ## HITS:1 COG:Z5878_2 KEGG:ns NR:ns ## COG: Z5878_2 COG0582 # Protein_GI_number: 15804857 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 EDL933 # 363 535 5 173 205 85 36.0 2e-16 MLKSRTYLYQRNGVFYIRLRMKTTSRLTASLPSHNRYKLASVSLRTKDRRTAMAHSRHIK SALKAIHADNPNASYEELREHLKTIVEWELSVSRDDLNDPESYQLYVDQYDDIKSNLREA VATERLTVDQHHYINDVIGVLKACQDRLKGDNSGLLSYLEPETGSLRPSVSLSVSSEPEV PEPLVTLERVTKALTLASLIEQYEQENAQNWKPATLSENRASHSTLIEIFDYLDIQDVGK ATRADMLRVREVLQQLPKNRKQRFKDIPLSDLLNRESKTDCLDVVTINNKYLIKMAAVFK WAVRNDLIAKNLTEGLELKVPQRKASDARDAFSPEQVRQLLVAAKAYSQKTSGKPYHYYV TALAAITGARLNEVAQLQVKDVRTTEAGTVFIHINEDDSSLPGKSIKNAHSDRCVPLVDG AYGFVLADFMSLVEDRRKTAGDNAMVFDGLKLMKNGYGEQVSKWFNRTLLPKVLADRSGL AFHSFRHTVATQLKQHGVELAYAQAIMGHSSGSITYDRYAKEVEVDRLVNVMAGVYKETG LNG >gi|299857060|gb|ADWS01000004.1| GENE 75 72611 - 73366 380 251 aa, chain - ## HITS:1 COG:ygeR KEGG:ns NR:ns ## COG: ygeR COG0739 # Protein_GI_number: 16130767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli K12 # 1 251 9 259 259 445 99.0 1e-125 MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTVKRGDTLYRISRTTGTS VKELARLNGISPPYTIEVGQKLKLGGAKSSSSTRKSTAKSTTKTASVTPSSAVPKSSWPP VGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYAAGAGKVVYVGNQLRGYGNLI MIKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGSTDAASVRLHFQIRYRATAIDPLR YLPPQGSKPKC >gi|299857060|gb|ADWS01000004.1| GENE 76 73781 - 76078 1851 765 aa, chain + ## HITS:1 COG:ygeS KEGG:ns NR:ns ## COG: ygeS COG1529 # Protein_GI_number: 16130768 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli K12 # 14 765 1 752 752 1528 99.0 0 MEAREATATGESCMRVDAIAKVTGRARYTDDYVMAGMCYAKYVRSPIAHGYAVSINDEQA RSLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALLTRHVRHHGDAVAIVVARD ELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGNLLKQSTMSTGNVQQTIDAAD YQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSSTQIPHIVRRVVGQALDIPWSCVR VIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKVSLSREECFLATRTRHAFTIDGQMG VNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAYLYPRCAYAYSSKTCYTNLPSAG AMRGYGAPQVVFAVESMLDDAATALGIDPVEIRLRNAAREGDANPLTGKRIYSAGLPECL EKGRKIFEWEKRRAECQNQQGNLRRGVGVACFSYTSNTWPVGVEIAGARLLMNQDGTINV QSGATEIGQGADTVFSQMVAETVGVPVSDVRVISTQDTDVTPFDPGAFASRQSYVAAPAL RSAALLLKEKIIAHAAVMLHQSAMNLTLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERG GQLSAESSIKTTTNPPAFGCTFVDLTVDIALCKVIINRILNVHDSGHILNPLLAEGQVHG GMGMGIGWALFEEMIIDAKSGVVRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKS LGEPPIIPVAAAIRNAVKMATGVAINTLPLTPKRLYEEFHLAGLI >gi|299857060|gb|ADWS01000004.1| GENE 77 76089 - 76967 642 292 aa, chain + ## HITS:1 COG:ygeT KEGG:ns NR:ns ## COG: ygeT COG1319 # Protein_GI_number: 16130769 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli K12 # 1 292 1 292 292 572 100.0 1e-163 MFDFASYHRAATLADAINLLADNPQAKLLAGGTDVLIQLHHHNDRYRHIVDIHNLAELRG ITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAATSIAGPQIRNVATYGGNICNGAT SADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSLEHDEILVAFHFPPQPKEHAG SAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFGVAAPTPIRCQHAEQTAQNAPLN LQTLEAISESVLQDVAPRSSWRASKEFRLHLIQTMTKKVISEAVAAAGGKLQ >gi|299857060|gb|ADWS01000004.1| GENE 78 76964 - 77443 300 159 aa, chain + ## HITS:1 COG:ygeU KEGG:ns NR:ns ## COG: ygeU COG2080 # Protein_GI_number: 16130770 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Escherichia coli K12 # 1 159 1 159 159 293 99.0 1e-79 MNHSETITIECTINEMPFQLHAAPGTPLSELLREQGLLSVKQGCCVGECGACTVLVDGTA IDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAK PREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK >gi|299857060|gb|ADWS01000004.1| GENE 79 77483 - 79261 1057 592 aa, chain - ## HITS:1 COG:ygeV KEGG:ns NR:ns ## COG: ygeV COG3829 # Protein_GI_number: 16130771 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 1 592 1 592 592 1179 99.0 0 MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAGTGAYGKFLGRQLSGNS RLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTPVILQDRCVGVISLIAVTH EQQEHISDNLREFSDYVRHISTIFVSKLLEDQGPGDNISKIFATMIDNMDQGVLVVDDES RVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFESNFTHGHMQHIVSWDDKSELIIGQLHN IQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVG ESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELFGYVKGAFTGASANGKTGL IQAANTGTLFLDEIGDMPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQF IAEGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPGIAPDVVEI LRKHRWPGNLRELSNLMEYLVNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSL DDAGGTALEEMEKQMIREALSRHNSKKQVADELGIGIATLYRKIKKYELLNT >gi|299857060|gb|ADWS01000004.1| GENE 80 79740 - 80927 1428 395 aa, chain + ## HITS:1 COG:ECs3743 KEGG:ns NR:ns ## COG: ECs3743 COG0078 # Protein_GI_number: 15832997 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 1 395 2 396 396 807 100.0 0 MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSG LGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGI RDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFG SLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAK NNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEQRTELLRANDHEGLKALEKQCL AQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEA SWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK >gi|299857060|gb|ADWS01000004.1| GENE 81 80985 - 82181 1151 398 aa, chain + ## HITS:1 COG:ECs3744 KEGG:ns NR:ns ## COG: ECs3744 COG1171 # Protein_GI_number: 15832998 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 398 1 398 398 825 99.0 0 MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVK KILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTD GNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQ QHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGV LGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWE ILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLM EKLALNKDAVVLVISTEGDTDMKHYREVVWEGKHAVAP >gi|299857060|gb|ADWS01000004.1| GENE 82 82239 - 83450 1563 403 aa, chain + ## HITS:1 COG:ECs3745 KEGG:ns NR:ns ## COG: ECs3745 COG0624 # Protein_GI_number: 15832999 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli O157:H7 # 1 403 1 403 403 848 99.0 0 MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEID PMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMA SMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQI YRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLT VSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRP SWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGI PVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE >gi|299857060|gb|ADWS01000004.1| GENE 83 83503 - 84888 1009 461 aa, chain + ## HITS:1 COG:ECs3746 KEGG:ns NR:ns ## COG: ECs3746 COG0044 # Protein_GI_number: 15833000 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli O157:H7 # 1 461 5 465 465 984 100.0 0 MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHT HFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVI DYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESGALTT VHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLYIVHL SNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWC GISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPE RFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPWEGFT CQGAIVRTLSRGETIFCDGTFTGKAGRGRFLRRKPFVPPVL >gi|299857060|gb|ADWS01000004.1| GENE 84 84936 - 85868 1167 310 aa, chain + ## HITS:1 COG:yqeA KEGG:ns NR:ns ## COG: yqeA COG0549 # Protein_GI_number: 16130776 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 310 1 310 310 564 100.0 1e-161 MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIVTHGNGPQVGMINQAFE AAAKTEAHSPMLPMSVCVALSQGYIGYDLQNALREELLSRGINKPVATLVTQVEVDANDP AFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVVASPKPVDIIEKETVKALVDA GQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLAEMIDADMLIILTAVEKVAINFG KENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAAASFARSRAGREALITVLSKAKEGI EGKTGTVICQ >gi|299857060|gb|ADWS01000004.1| GENE 85 85909 - 87534 1263 541 aa, chain - ## HITS:1 COG:yqeB KEGG:ns NR:ns ## COG: yqeB COG1975 # Protein_GI_number: 16130777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Escherichia coli K12 # 1 541 1 541 541 1046 99.0 0 MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSIVGTIGGGMVERKVIEE SLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGMRPRLVLIGAGHVNRAIAQ SAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAVEALDIRPDNFVLIATNNQDR EALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEEHIARLHAPVGYNIGAETPQEIA ISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGAGDIASGVALRLYHAGFKVIMLEVE KPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSAEAMKLTERGFIPVMADPACSLLDELK PLCVVDAILAKQNLGTRADMAPVTIALGPGFTAGKDCHAVIETNRGHWLGQVIYSGCAQE NTGVPGNIMGHTTRRVIRAPAAGIMRSNVKLGDLVKEGDVIAWIGEHEIKAPLTGMVRGL LNDGLAVVGGFKIGDIDPRGETADFTSVSDKARAIGGGVLEALMMLMHQGVKATKEVLEV A >gi|299857060|gb|ADWS01000004.1| GENE 86 87582 - 88184 168 200 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_2996 NR:ns ## KEGG: ECIAI1_2996 # Name: yqeC # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 200 57 256 256 419 100.0 1e-116 MFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECD VILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITG LTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDV EAIWLGDIQEHPAIARRFVN >gi|299857060|gb|ADWS01000004.1| GENE 87 88455 - 89033 174 192 aa, chain + ## HITS:1 COG:ECs3750 KEGG:ns NR:ns ## COG: ECs3750 COG2068 # Protein_GI_number: 15833004 # Func_class: R General function prediction only # Function: Uncharacterized MobA-related protein # Organism: Escherichia coli O157:H7 # 1 192 1 192 192 393 98.0 1e-109 MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCSRIILVTGYRGNELHER YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG AILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGAHYSVEIENAEIILDIDTPD DFITAQKRYTKI >gi|299857060|gb|ADWS01000004.1| GENE 88 89355 - 92453 2582 1032 aa, chain + ## HITS:1 COG:ygfK_2 KEGG:ns NR:ns ## COG: ygfK_2 COG0493 # Protein_GI_number: 16130780 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 451 1032 1 582 582 1227 99.0 0 MGDIMRPIPFEELLTRIFDEYQQQRSIFGIPEQQFYSPVKGKTVSVFGETCATPVGPAAG PHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAEDECFNTEWSTEFTLLKAWD EYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQPPMQQFIDNMMDASDHPKFA QYRDTLNKLLQDDAFLARHGLQEKRESLQALPARIPTSMVQGVTLSTMHGCPPHEIEAIC RYMLEEKGLNTFVKLNPTLLGYARVREILDVCGFGYIGLKEESFDHDLKLTQALEMLERL MALAKEKSLGFGVKLTNTLGTINNKGALPGEEMYMSGRALFPLSINVAAVLSRAFDGKLP ISYSGGASQLTIRDIFDTGIRPITMATDLLKPGGYLRLSACMRELEGSDAWGLDHVDVER LNRLAADALTMEYTQKHWKPEERIEVAEDLPLTDCYVAPCVTACAIKQDIPEYIRLLGEH RYADALELIYQRNALPAITGHICDHQCQYNCTRLDYDSALNIRELKKVALEKGWDEYKQR WHKPAGSGSRHPVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIPQFRIPA ELIQHDIDFVADHGVKFEYGCSPDLTVEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVW KSLPFLREYNKGTALKLGKHVVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAW REEYEEALHDGVEFRFLNNPERFDADGTLTLRVMSLGEPDEKGRRRPVETNETVTLHVDS LITAIGEQQDTEALNAMGVPLDKNGWPDVDHNGETRLTDVFMIGDVQRGPSSIVAAVGTA RRATDAILSRENIRSHQNDKYWNNVNPAEIYQRKGDISITLVNSDDRDAFVAQEAARCLE CNYVCSKCVDVCPNRANVSIAVPGFQNRFQTLHLDAYCNECGNCAQFCPWNGKPYKDKIT VFSLAQDFDNSSNPGFLVEDCRVRVRLNNQSWVLNIDSEGQFNNVPPELNDMCRIISHVH QHHHYLLGRVEV >gi|299857060|gb|ADWS01000004.1| GENE 89 92456 - 93784 1303 442 aa, chain + ## HITS:1 COG:Z4218 KEGG:ns NR:ns ## COG: Z4218 COG0402 # Protein_GI_number: 15803416 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 EDL933 # 1 442 23 464 464 908 99.0 0 MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASYKEMHGRIVMPGIVC SHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCT SVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARQI DEAKKAATEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHH WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDIALLNQRDAFLVHNARSNMNNHVGYNHH LSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKF GLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDC DSIYAQARKAAASMWRRMDALA >gi|299857060|gb|ADWS01000004.1| GENE 90 93835 - 94614 807 259 aa, chain + ## HITS:1 COG:ECs3753 KEGG:ns NR:ns ## COG: ECs3753 COG1319 # Protein_GI_number: 15833007 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 504 100.0 1e-143 MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWVDWD NGALRIGAMSRLQPLRDARFIPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVL LALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAV AMTDHDGMRIALDGVASKALRLHDVEKQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIT GVLVADLYADCQQAGEEAV >gi|299857060|gb|ADWS01000004.1| GENE 91 94611 - 97481 2682 956 aa, chain + ## HITS:1 COG:ECs3754_2 KEGG:ns NR:ns ## COG: ECs3754_2 COG1529 # Protein_GI_number: 15833008 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli O157:H7 # 160 956 1 797 797 1639 99.0 0 MIIHFTLNGAPQELTVNPGENVQKLLFNMGMHSVRNSDDGFGFAGSDAIIFNGNIVNASL LIAAQLEKADIRTAESLGKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAPT REEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQATIDIAPTFRDDLEVIGKHYPKTD AAKMVQAKPCYVEDRVTADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPD IYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPV MSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAAS IHGHIGDMDKGFADADVIIERTYNSTQAQQCPTETHICFTRMDGDRLVIHASTQVPWHLR RQVARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVLFRYTREEEFIA NTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVD FQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKI LGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKPQNGDWHIGRGVAIIMQKSGIP DIDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHAL FDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEAVADVQLATPGVVRGKKGEVS FGDIAHKGETGTGFGSLVGTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCG TPVNPELALGQIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVL VPSDDKVGPFGAKSISEIGVNGAAPAIATAIHDACGIWLREWHFTPEKILTALEKI >gi|299857060|gb|ADWS01000004.1| GENE 92 97646 - 99046 292 466 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 45 453 27 425 447 117 25 6e-25 MSDINNAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVTPALIVGAALQLSAETTAYL VSMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIALGSSMKSDGFHEELIMSS LLGVSFVGAFLVVGSSFILPYLRRVITPTVSGIVVLMIGLSLIKVGIIDFGGGFAAKSSG TFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVGYIASLCLGMVDFSSMRNLP LITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATAMVSRRPIQGEEYQSRLKGG VLADGLVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGRTIAVMLVILGLFPMIGGFF TTIPSAVLGGAMTLMFSMIAIAGIRIIITNGLKRRETLIVATSLGLGLGVSYDPEIFKIL PASIYVLVENPICAGGLTAILLNIILPGGYRQENVLPGITSAEEMD >gi|299857060|gb|ADWS01000004.1| GENE 93 99064 - 100380 1322 438 aa, chain + ## HITS:1 COG:ECs3756 KEGG:ns NR:ns ## COG: ECs3756 COG0402 # Protein_GI_number: 15833010 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 1 438 2 439 439 917 99.0 0 MSGEHTLKAVRGSFIDVTRTVDNPEEIASALRFIEDGLLLIKQGKVEWFGEWEDGKHQIP DTIRVRDYRGKLIVPGFVDTHIHYPQSEMVGAYGEQLLEWLNKHTFPTERRYEDLEYARE MSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASHINMRMIAGKVMMDRNAPDYLLDT AESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQMAMAQRLKEEYPDTWVHTHLCEN KDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPTS NLYLGSGLFNLKKAWQKKVKVGMGTDIGAGTTFNMLQTLNEAYKVLQLQGYRLSAYEAFY LATLGGAKSLGLDDLIGNFLPGKEADFVVMEPTATPLQQLRYDNSVSLVDKLFVMMTLGD DRSIYRTYVDGRLVYERN >gi|299857060|gb|ADWS01000004.1| GENE 94 100416 - 101783 1187 455 aa, chain + ## HITS:1 COG:ECs3757 KEGG:ns NR:ns ## COG: ECs3757 COG2252 # Protein_GI_number: 15833011 # Func_class: R General function prediction only # Function: Permeases # Organism: Escherichia coli O157:H7 # 1 455 1 455 455 711 100.0 0 MSGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAG FPPAAVFVATCLVAGFGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQQISVPVALGAV FLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLLLIAANGVGMVIKNPIEGLPV ALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPS LTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIIN GGKALTSDSVSSIFSGLVGAAPAAVYIESAAGTAAGGKTGLTATVVGALFLLILFLSPLS FLIPGYATAPALMYVGLLMLSNVSKLDFNDFIDAMAGLVCAVFIVLTCNIVTGIMLGFVT LVVGRVFAREWQKLNIGTVIITAALVAFYAGGWAI >gi|299857060|gb|ADWS01000004.1| GENE 95 101819 - 102307 241 162 aa, chain - ## HITS:1 COG:ygfS KEGG:ns NR:ns ## COG: ygfS COG1142 # Protein_GI_number: 16130788 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli K12 # 1 162 2 163 163 265 98.0 4e-71 MKSLIIVNPADCIGCRTCEVACVVAHPPEQELNADVFLPRLKVQRLDSISAPVMCHQCEN APCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMISIQSLPGDTRQQIVKCDLC EQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL >gi|299857060|gb|ADWS01000004.1| GENE 96 102307 - 104241 905 644 aa, chain - ## HITS:1 COG:ECs3759_2 KEGG:ns NR:ns ## COG: ECs3759_2 COG0493 # Protein_GI_number: 15833013 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli O157:H7 # 158 644 1 487 487 993 98.0 0 MKGMQMNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHVVGKGQAANPVA CHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQKCDLC NQRSSGTQACIEVCPTQALRLMDDKGLQQIKVARQRKTAAGKASSVAQPSRSAALLPVNS RKGADKISASERKNHFGEIYCGLDPLQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRL VQEGKIIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVTIGNLERYITDTAL AMGWRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPP FKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPH EDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNA ASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGE PGPDGRRRPRAVAGSEFELPADVLIMAFGFQAHAMPWLQGSGIKLDKWGLIQTGDVGYLP TQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFDTKAS >gi|299857060|gb|ADWS01000004.1| GENE 97 104662 - 106110 375 482 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 29 440 15 416 447 149 27 1e-34 MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSK EAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLG IFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYG NPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFA IVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGV GTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQF VLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVL QPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEH GE >gi|299857060|gb|ADWS01000004.1| GENE 98 106112 - 106237 112 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF >gi|299857060|gb|ADWS01000004.1| GENE 99 106360 - 106908 460 182 aa, chain + ## HITS:1 COG:ECs3761 KEGG:ns NR:ns ## COG: ECs3761 COG1443 # Protein_GI_number: 15833015 # Func_class: I Lipid transport and metabolism # Function: Isopentenyldiphosphate isomerase # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 373 98.0 1e-103 MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKGQLLVTRRALSKKAWPG VWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPNGIVENEVCPV FAARTNSALQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQAANSEARKLLSAFAQ HN >gi|299857060|gb|ADWS01000004.1| GENE 100 106951 - 108468 1992 505 aa, chain - ## HITS:1 COG:lysS KEGG:ns NR:ns ## COG: lysS COG1190 # Protein_GI_number: 16130792 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Escherichia coli K12 # 1 505 1 505 505 1003 99.0 0 MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGG REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPVK >gi|299857060|gb|ADWS01000004.1| GENE 101 108478 - 109359 1005 293 aa, chain - ## HITS:1 COG:ECs3763 KEGG:ns NR:ns ## COG: ECs3763 COG1186 # Protein_GI_number: 15833017 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Escherichia coli O157:H7 # 1 293 73 365 365 542 100.0 1e-154 MKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDI QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED NKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL >gi|299857060|gb|ADWS01000004.1| GENE 102 109667 - 111400 1769 577 aa, chain - ## HITS:1 COG:ECs3764 KEGG:ns NR:ns ## COG: ECs3764 COG0608 # Protein_GI_number: 15833018 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Escherichia coli O157:H7 # 1 577 1 577 577 1149 99.0 0 MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE VVDQAHARGAQLIVTVDNGISSHAGVVHARSLGIPVIVTDHHLPGETLPAAEAIINPNLR DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQVEALTLCEKLERSRDTLPGGLAM YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP GMILKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI >gi|299857060|gb|ADWS01000004.1| GENE 103 111406 - 112116 728 236 aa, chain - ## HITS:1 COG:ECs3765 KEGG:ns NR:ns ## COG: ECs3765 COG1651 # Protein_GI_number: 15833019 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 468 100.0 1e-132 MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPVAGMKTVLTNSGVLYIT DDGKHIIQGPMYDVSGTAPVNVTNKMLLKQLNALEKEMIVYKAPQEKHVITVFTDITCGY CHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAP ASCDVDIADHYALGVQLGVSGTPAVVLSNGTLVPGYQPPKEMKEFLDEHQKMTSGK >gi|299857060|gb|ADWS01000004.1| GENE 104 112141 - 113037 728 298 aa, chain - ## HITS:1 COG:xerD KEGG:ns NR:ns ## COG: xerD COG4974 # Protein_GI_number: 16130796 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Escherichia coli K12 # 1 298 1 298 298 545 99.0 1e-155 MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLA ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER LLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVS LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA >gi|299857060|gb|ADWS01000004.1| GENE 105 113149 - 113670 721 173 aa, chain + ## HITS:1 COG:ECs3767 KEGG:ns NR:ns ## COG: ECs3767 COG0716 # Protein_GI_number: 15833021 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 342 100.0 2e-94 MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLMEQYDVLILGIPTWDFGE IQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWP TEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSWCEQILNEMAEHYA >gi|299857060|gb|ADWS01000004.1| GENE 106 113710 - 114117 243 135 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3471 NR:ns ## KEGG: ECO103_3471 # Name: ygfX # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 135 1 135 135 215 100.0 3e-55 MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRI NARQGEIRLLMDGRLRWQGQEWCIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAE WRDLRRILLQQETQR >gi|299857060|gb|ADWS01000004.1| GENE 107 114098 - 114364 336 88 aa, chain - ## HITS:1 COG:ECs3769 KEGG:ns NR:ns ## COG: ECs3769 COG2938 # Protein_GI_number: 15833023 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 171 100.0 4e-43 MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMN HGKPADAELEMMVRLIQTRNRERGPVAI >gi|299857060|gb|ADWS01000004.1| GENE 108 114607 - 115587 1098 326 aa, chain + ## HITS:1 COG:ygfZ KEGG:ns NR:ns ## COG: ygfZ COG0354 # Protein_GI_number: 16130800 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Escherichia coli K12 # 1 326 1 326 326 627 100.0 1e-179 MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLA AHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGV AGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGE AELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKF RGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDM EPDSIFRVRDDANTLHIEPLPYSLEE >gi|299857060|gb|ADWS01000004.1| GENE 109 115664 - 116323 656 219 aa, chain - ## HITS:1 COG:ECs3771 KEGG:ns NR:ns ## COG: ECs3771 COG1272 # Protein_GI_number: 15833025 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 357 100.0 1e-98 MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDLNASATAITSYSLYGGS MILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGLMIVIW SLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMAVKLAAGSVTLLAVGGVVYSL GVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQA >gi|299857060|gb|ADWS01000004.1| GENE 110 116487 - 116798 354 103 aa, chain - ## HITS:1 COG:ECs3772 KEGG:ns NR:ns ## COG: ECs3772 COG3097 # Protein_GI_number: 15833026 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 103 1 103 103 185 99.0 2e-47 MQPNDITFFQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRFEDDGYFCTIEVTATST VTLDTLTEKHAEQENMTLTELIKVIADIYPGQTQFYVIEFKCL >gi|299857060|gb|ADWS01000004.1| GENE 111 116837 - 118276 1678 479 aa, chain + ## HITS:1 COG:bglA KEGG:ns NR:ns ## COG: bglA COG2723 # Protein_GI_number: 16130803 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 479 1 479 479 1007 99.0 0 MIVKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKY YPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDE LLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNE INNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGC MLAMVPLYPYCCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGD LDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRY ALCELYERYQRPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLM GYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGAGDMSRSRKKSFNWYQEVIASNGEKL >gi|299857060|gb|ADWS01000004.1| GENE 112 118333 - 119076 243 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 5 247 7 240 242 98 30 3e-19 MAIALVTGGSRGIGRATALLLAKEEYTLAVNYQQNLHAAQEVVNLITQAGGKAFVLQADI SDENQVIAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCR EAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKGAIDTLTTGLSLEVAAQGIR VNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSF IDLAGGK >gi|299857060|gb|ADWS01000004.1| GENE 113 119342 - 122215 3287 957 aa, chain - ## HITS:1 COG:ECs3774_2 KEGG:ns NR:ns ## COG: ECs3774_2 COG1003 # Protein_GI_number: 15833028 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Escherichia coli O157:H7 # 451 957 1 507 507 1029 99.0 0 MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQIVPKDIQLATPPQVGA PATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNMLENPGWYTAYTPYQPEVS QGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAMAKRVSKLKNANRFFVASDVH PQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQQVGTTGEIHDYTALISELKSRK IVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEYKRSMPGR IIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPIGLKRI ANRIHRLTDILAAGLQQKGLKLRHAHYFDTLCVEVADKAGVLTRAEAAEINLRSDILNAV GITLDETTTRENVMQLFNVLLGDNHGLDIDTLDKDVAHDSRSIQPAMLRDDEILTHPVFN RYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPE QAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLI PASAHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVY EETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPG MGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKK ASQVAILNANYIASRLQDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDY GFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNA PHIQNELVAEWAHPYSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ >gi|299857060|gb|ADWS01000004.1| GENE 114 122334 - 122723 509 129 aa, chain - ## HITS:1 COG:ECs3775 KEGG:ns NR:ns ## COG: ECs3775 COG0509 # Protein_GI_number: 15833029 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Escherichia coli O157:H7 # 1 129 1 129 129 217 100.0 4e-57 MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAV AESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDAT AYEALLEDE >gi|299857060|gb|ADWS01000004.1| GENE 115 122747 - 123841 1413 364 aa, chain - ## HITS:1 COG:gcvT KEGG:ns NR:ns ## COG: gcvT COG0404 # Protein_GI_number: 16130807 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Escherichia coli K12 # 1 364 1 364 364 746 100.0 0 MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGS RTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREK DLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKPFFGVQAG DLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAGMNLYGQEM DETISPLAANMGWTIAWEPADRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVRF TDAQGNQHEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNREMPVKVTKPVFVRNG KAVA >gi|299857060|gb|ADWS01000004.1| GENE 116 124289 - 125491 1243 400 aa, chain - ## HITS:1 COG:ECs3777 KEGG:ns NR:ns ## COG: ECs3777 COG0654 # Protein_GI_number: 15833031 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 808 99.0 0 MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADAPPQLRVSAINAASEKL LTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNK AQQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLVIGADGANSWLRNKADIPLTF WDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQA SEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFAAHRLVLVGDAAHTIHPLAGQ GVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGT NPAKKLLRDIGLKLADTLPGVKPQLIRQAMGLNDLPEWLR >gi|299857060|gb|ADWS01000004.1| GENE 117 125514 - 126692 845 392 aa, chain - ## HITS:1 COG:ubiH KEGG:ns NR:ns ## COG: ubiH COG0654 # Protein_GI_number: 16130809 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 392 1 392 392 743 97.0 0 MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPGFDGRAIALAAGTCQQL ARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAALGQVVELHNVGQRLFALLR KAPGVMLHCPDRVANVARTQSHVEVTLESGEMLTGRVLIAADGTHSALATACGVDWQQEP YEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDGRCSLVWCHPLERREEVLSWSDE KFCRELQSAFGWRLGKITHAGKRSAYPLALTRAARAITHRTVLVGNAAQTLHPIAGQGFN LGMRDVMSLAETLTQAHERGEDIGDYGILCRYQQRRQSDREATIGVTDSLVHLFANRWAP LVVGRNIGLMTMELFTPARDVLAQRTLGWVAR >gi|299857060|gb|ADWS01000004.1| GENE 118 126689 - 128014 1385 441 aa, chain - ## HITS:1 COG:ECs3779 KEGG:ns NR:ns ## COG: ECs3779 COG0006 # Protein_GI_number: 15833033 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli O157:H7 # 1 441 1 441 441 892 98.0 0 MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPE AVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQ LLNGLDVVYHAQGEYTYADEIVNSALEKLRKGSRQNLTAPATMIDWRPIVHEMRLFKSPE EIAVLRRAGEITALAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENG CILHYTENECELRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLET SLRLYRPGTSMQEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLD VHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENL TASVVKKPEEIEALMAAARKQ >gi|299857060|gb|ADWS01000004.1| GENE 119 128040 - 128618 637 192 aa, chain - ## HITS:1 COG:ECs3780 KEGG:ns NR:ns ## COG: ECs3780 COG3079 # Protein_GI_number: 15833034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 192 3 194 194 359 100.0 1e-99 MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDSSWLPLLHDLTNEGMAF GHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRADALAGWVNHFLLGLGVTQ PKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFTHPQ PTAPEVQKPTLH >gi|299857060|gb|ADWS01000004.1| GENE 120 128786 - 129115 366 109 aa, chain + ## HITS:1 COG:ECs3781 KEGG:ns NR:ns ## COG: ECs3781 COG3027 # Protein_GI_number: 15833035 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 163 100.0 6e-41 MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALN ISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITEKTNQNFE >gi|299857060|gb|ADWS01000004.1| GENE 121 129065 - 129328 63 87 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_3030 NR:ns ## KEGG: ECIAI1_3030 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 87 22 108 108 178 100.0 5e-44 MPPQAVTLEPLVQGECVVAVLRLLGRTEHAHQPRSATFLWYEISAQGTGPLANISEKFCL HGYSTTVNRKVSFKVLVSFFGDATLFK >gi|299857060|gb|ADWS01000004.1| GENE 122 129415 - 129963 382 182 aa, chain + ## HITS:1 COG:ECs3782 KEGG:ns NR:ns ## COG: ECs3782 COG0212 # Protein_GI_number: 15833036 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 359 100.0 1e-99 MIRQRRRALTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAG KRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAF DEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVW EW >gi|299857060|gb|ADWS01000004.1| GENE 123 130744 - 131976 1377 410 aa, chain - ## HITS:1 COG:ECs3784 KEGG:ns NR:ns ## COG: ECs3784 COG0111 # Protein_GI_number: 15833038 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 802 100.0 0 MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLR SRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGEL LLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFY DIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASR GTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEA QENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPLHGGRRLMHIHENRPGVLTALNKIFAE QGVNIAAQYLQTSAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRARLLY >gi|299857060|gb|ADWS01000004.1| GENE 124 132231 - 132890 836 219 aa, chain - ## HITS:1 COG:ECs3785 KEGG:ns NR:ns ## COG: ECs3785 COG0120 # Protein_GI_number: 15833039 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 397 100.0 1e-111 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKL KSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADAS KQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGVVTDNGNVILDVHGMEILDPI AMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK >gi|299857060|gb|ADWS01000004.1| GENE 125 132946 - 133176 146 76 aa, chain - ## HITS:1 COG:yqfE KEGG:ns NR:ns ## COG: yqfE COG0583 # Protein_GI_number: 16130816 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 76 1 76 76 132 94.0 2e-31 MHFAQRVRALVVLNGVALLLQFACKQGLATGELVRLFAPWSGIPRLLHALFAGRKGMPAI ARYFMDELTTRLANGV >gi|299857060|gb|ADWS01000004.1| GENE 126 133318 - 134211 889 297 aa, chain + ## HITS:1 COG:ECs3786 KEGG:ns NR:ns ## COG: ECs3786 COG0583 # Protein_GI_number: 15833040 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 577 100.0 1e-165 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD >gi|299857060|gb|ADWS01000004.1| GENE 127 134415 - 136559 2294 714 aa, chain + ## HITS:1 COG:Zsbm_1 KEGG:ns NR:ns ## COG: Zsbm_1 COG1884 # Protein_GI_number: 15803451 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Escherichia coli O157:H7 EDL933 # 1 585 1 585 585 1130 99.0 0 MSNEQEWQQLANKELSRREKTVDSLVQQTAEGIAIKPLYTEADLDNLEVTGTLPGLPPYV RGPRATMYTAQPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDNPR VAGDVGKAGVAIDTVEDMKVLFDQIPLDKMSVSMTMNGAVLPVLAFYIVAAEEQGVTPDK LTGTIQNDILKEYLCRNTYIYPPKPSMRIIADIIAWCSGNMPRFNTISISGYHMGEAGAN CVQQVAFTLADGIEYIKAAISAGLKIDDFAPRLSFFFGIGMDLFMNVAMLRAARYLWSEA VSGFGAQDPKSLALRTHCQTSGWSLTEQDPYNNVIRTTIEALAATLGGTQSLHTNAFDEA LGLPTDFSARIARNTQIIIQEESELCRTVDPLAGSYYIESLTDQIVKQARAIIQQIDEAG GMAKAIEAGLPKRMIEEASAREQSLIDQGKRVIVGVNKYKLDHEDETDVLEIDNVMVRNE QIASLERIRATRDDAAVTAALNALTHAAQHNENLLAAAVNAARVRATLGEISDALEAAFD RYLVPSQCVTGVIAQSYHQSEKSASEFDAIVAQTEQFLADNGRRPRILIAKMGQDGHDRG AKVIASAYSDLGFDVDLSPMFSTPEEIARLAVENDVHVVGASSLAAGHKTLIPELVEALK KWGREDICVVAGGVIPPQDYAFLQERGVAAIYGPGTPMLDSVRDVLNLISQHHD >gi|299857060|gb|ADWS01000004.1| GENE 128 136552 - 137547 842 331 aa, chain + ## HITS:1 COG:argK KEGG:ns NR:ns ## COG: argK COG1703 # Protein_GI_number: 16130819 # Func_class: E Amino acid transport and metabolism # Function: Putative periplasmic protein kinase ArgK and related GTPases of G3E family # Organism: Escherichia coli K12 # 1 331 1 331 331 657 99.0 0 MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLLDAIMPYCGNTLRLGVT GTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIR PVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGG DDLQGIKKGLMEVADLLVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCSA LEKRGIDEIWHAIIDFKTALTASGRLQQVRQQQSVEWLRKQTEEEVLNHLFANEDFDRYY RQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD >gi|299857060|gb|ADWS01000004.1| GENE 129 137558 - 138343 907 261 aa, chain + ## HITS:1 COG:ECs3789 KEGG:ns NR:ns ## COG: ECs3789 COG1024 # Protein_GI_number: 15833043 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli O157:H7 # 1 261 15 275 275 525 100.0 1e-149 MSYQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSK VFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDL IIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNH VVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDS EDYQEGMNAFLEKRKPNFVGH >gi|299857060|gb|ADWS01000004.1| GENE 130 138367 - 139845 1209 492 aa, chain + ## HITS:1 COG:ECs3790 KEGG:ns NR:ns ## COG: ECs3790 COG0427 # Protein_GI_number: 15833044 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Escherichia coli O157:H7 # 1 492 1 492 492 990 99.0 0 METQWTRMTADEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARRANEQHEAKKPYQIRLL TGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSFVDLHLSEVAQMVNYGFFG DIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIELNHYHDPRVAELADIVIPGA PPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADNVVTF LLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENPEIPPFMMYSEVLQESVVHLLETGK ISGASASSLTISADSLRKIYDNMDYFASRIVLRPQEISNNPEIIRRLGVIALNVGLEFDI YGHANSTHVAGVDLMNGIGGSGDFERNAYLSIFMAPSIAKEGKISTVVPMCSHVDHSEHS VKVIITEQGIADLRGLSPLQRARTIIDNCAHPMYRDYLHRYLENAPGGHIHHDLSHVFDL HRNLIATGSMLG >gi|299857060|gb|ADWS01000004.1| GENE 131 139842 - 140738 648 298 aa, chain - ## HITS:1 COG:ygfI KEGG:ns NR:ns ## COG: ygfI COG0583 # Protein_GI_number: 16130822 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 298 6 303 303 596 100.0 1e-170 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH >gi|299857060|gb|ADWS01000004.1| GENE 132 140905 - 141645 803 246 aa, chain - ## HITS:1 COG:ECs3793 KEGG:ns NR:ns ## COG: ECs3793 COG2968 # Protein_GI_number: 15833047 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 410 100.0 1e-114 MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDIATLAIEVNVAAKDAAT AKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDGKSILKGYRAVRTVEVTLR QLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKAAIDNAIHQAQELANGFHRKL GPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQAAIQFDDQVDVVFQLEPVDQQPA KTPAAQ >gi|299857060|gb|ADWS01000004.1| GENE 133 141738 - 142373 658 211 aa, chain - ## HITS:1 COG:ECs3794 KEGG:ns NR:ns ## COG: ECs3794 COG1279 # Protein_GI_number: 15833048 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 366 99.0 1e-101 MFSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCAISDLVLICAGIFGGSA LLMQSPWLLALVTWGGVAFLLWYGFGAFKTAMSSNIELASAEVLKQGRWKIIATMLAVTW LNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWFFGLAILAAWLAPRLRTAKSQ RIINLVVGCVMWFIALQLARDGIAHAQALFS >gi|299857060|gb|ADWS01000004.1| GENE 134 142512 - 143372 1045 286 aa, chain - ## HITS:1 COG:ECs3795 KEGG:ns NR:ns ## COG: ECs3795 COG0668 # Protein_GI_number: 15833049 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 498 100.0 1e-141 MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRK IDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAA GVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSR EPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVW SNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVKEDKAA >gi|299857060|gb|ADWS01000004.1| GENE 135 143730 - 144809 1102 359 aa, chain - ## HITS:1 COG:Zfba KEGG:ns NR:ns ## COG: Zfba COG0191 # Protein_GI_number: 15803459 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 EDL933 # 1 359 26 384 384 742 100.0 0 MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQ FSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWI DGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTG GEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPT ILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGV LNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL >gi|299857060|gb|ADWS01000004.1| GENE 136 145024 - 146187 1455 387 aa, chain - ## HITS:1 COG:pgk KEGG:ns NR:ns ## COG: pgk COG0126 # Protein_GI_number: 16130827 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Escherichia coli K12 # 1 387 1 387 387 717 100.0 0 MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAKVMVTSHL GRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVAEGELVVLENVRFNKGEKK DDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKE PARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFIAAQGHDVGKSLYEADLVD EAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVNDVKADEQILDIGDASAQELAEILKN AKTILWNGPVGVFEFPNFRKGTEIVANAIADSEAFSIAGGGDTLAAIDLFGIADKISYIS TGGGAFLEFVEGKVLPAVAMLEERAKK >gi|299857060|gb|ADWS01000004.1| GENE 137 146237 - 147256 706 339 aa, chain - ## HITS:1 COG:ECs3798 KEGG:ns NR:ns ## COG: ECs3798 COG0057 # Protein_GI_number: 15833052 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 339 1 339 339 679 100.0 0 MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWE VRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKV LFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTT IHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTI NVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGT QTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMATVAFR >gi|299857060|gb|ADWS01000004.1| GENE 138 147628 - 148059 349 143 aa, chain + ## HITS:1 COG:ECs3799 KEGG:ns NR:ns ## COG: ECs3799 COG1661 # Protein_GI_number: 15833053 # Func_class: R General function prediction only # Function: Predicted DNA-binding protein with PD1-like DNA-binding motif # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 273 98.0 7e-74 MMTLPYPYSSSARFYALRLLPGQEVFSQLHAFAQQHQLHAAWIAGCTGSLTDVALRYAGQ EGTTLLNGTFEVISLNGTLEQSGEHLHLCVSDPHGTMLGGHMMPGCTVRTTLELVIGSLE ELAFSRQPCALSGYDELHISPVK >gi|299857060|gb|ADWS01000004.1| GENE 139 148082 - 148660 623 192 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3217 NR:ns ## KEGG: EC55989_3217 # Name: not_defined # Def: putative ABC-type transport system # Organism: E.coli_55989 # Pathway: not_defined # 1 192 34 225 225 267 98.0 2e-70 MARSHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSIGTLISAVLLGPVIGMLTGLL TNLLWGLLTNPIAAAFAPVAMVIGLVAGCLARAGWFRTLPKVVVSGVIITLAVTVVAVPL RTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANLVDKILTAVIVWLLLRQLPIR TTRHFPAMAAVR >gi|299857060|gb|ADWS01000004.1| GENE 140 148661 - 149368 395 235 aa, chain + ## HITS:1 COG:ECs3801 KEGG:ns NR:ns ## COG: ECs3801 COG0619 # Protein_GI_number: 15833055 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 407 98.0 1e-114 MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATRRRAKYVVWLMFSLGAG LWLVHGGWLPEWLSGTPRSPERWSHAITLWLRILAIVSTSQLWMQYVPVQCFIRALFASR LPPGVAYLFAGPLLVVEQLKRQLAIIHEAQRARGVPLDEGWYQRLRAMPALIIPLTHNAL NDLAVRGAALDMRAFRIHNRRTTLWAPADSTLQRVARYTMILLMLTEFGAWIWLR >gi|299857060|gb|ADWS01000004.1| GENE 141 149356 - 150033 477 225 aa, chain + ## HITS:1 COG:ECs3802 KEGG:ns NR:ns ## COG: ECs3802 COG1122 # Protein_GI_number: 15833056 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 451 100.0 1e-127 MVTLEQFRYCPTHSTHPPFCYDFHYVKPGMVAIFGDNGSGKSTLAQLMAGWYPDFLPGEI TGTGTLLGTPIGHLPLNEQSATIQLVQQSPYLQLSGCTFSVEEEVAFGPENLCLAEAEIM ARIDAALTLTECQPLRHRHPATLSGGETQRVVIACAIAMQPKLLILDEAFSRLTPQASEM LLQRLQHWAFERGSLIILFERHRTPFLNYCQQAWQLQNGALQPLC >gi|299857060|gb|ADWS01000004.1| GENE 142 150027 - 150704 183 225 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] # 1 209 1 205 205 75 26 3e-12 MLTLNKISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKSTLLRVMAGLLTPTAGTV MLQQQAMKNLKNRQRAAKIGVLFQEAENQLFHSTVADEIAFGLKLQKCPADEITQRTHAA LQCCQLADTANAHPLDLHSAQRRMVAVACLEALSPPLLLLDEPSRDFDENWLSVFESWLE KCRQRGTSVVAISHDAAFTRRHFSRVVRLEDGLIRNVNPPDDIHP >gi|299857060|gb|ADWS01000004.1| GENE 143 150676 - 151389 453 237 aa, chain - ## HITS:1 COG:ECs3804 KEGG:ns NR:ns ## COG: ECs3804 COG1072 # Protein_GI_number: 15833058 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 459 93.0 1e-129 MNIELTVNGLKVQAQYSDDEIENVHKPLLRMLAALQAVSSQRRTVVFLCAPPGTGKSTLT TFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFDVVKLAENLRQVVE GDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWCQLAQFCDFSIFINAPATA LRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEESLPANLTLMMTATGEYRLVD >gi|299857060|gb|ADWS01000004.1| GENE 144 151386 - 151895 343 169 aa, chain - ## HITS:1 COG:yggD KEGG:ns NR:ns ## COG: yggD COG3722 # Protein_GI_number: 16130830 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 169 1 169 169 292 97.0 2e-79 MATLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVDNDEEIVEYAVKPLLAQ SGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQDETPGFADDMTWDFISNVN SITCNATLYDALKAMKFADFAVWSEARFSGMVKTALTLAVTTTLKELTP >gi|299857060|gb|ADWS01000004.1| GENE 145 151917 - 152882 847 321 aa, chain - ## HITS:1 COG:yggF KEGG:ns NR:ns ## COG: yggF COG1494 # Protein_GI_number: 16130831 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Escherichia coli K12 # 1 321 1 321 321 625 99.0 1e-179 MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALNDVAFRGRVVIGEGEID HAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNVLAVMAFAPRDSLLHAPDMYMK KLVVNRLAAGAIDLSLPLADNLRNVARALGKPLDKLRMVTLDKPRLSAAIEEATQLGVKV FALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISACAVKALGGDMQAELIDFCQAKGD YTENRQIAEQERKRCKAMGVDVNRVYSLDELVRGNDILFSATGVTGGELVNGIQQTANGV RTQTLLIGGADQTCNIIDSLH >gi|299857060|gb|ADWS01000004.1| GENE 146 152879 - 154156 1239 425 aa, chain - ## HITS:1 COG:ECs3807 KEGG:ns NR:ns ## COG: ECs3807 COG1063 # Protein_GI_number: 15833061 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 425 1 425 425 856 98.0 0 MKTKVAAIYGKRDVRLREFELPEITDNELLESVISDSVCLSTWKAALLGSEHKRVPDDLE NHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSGYSAGYSYEYFGGNATYMI IPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHANYHTTQYVYEHRMGVKPGGNIAL LACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVDLAASKGIELVYVNTK GMSDPVQTLRALTGDVGFDDIFVYAAVPAVVEMADELLAEDGCLNFFAGPTDKNFKVPFN FYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQLQPSFMVTHIGGLDAVPDTVLNLPDIP GGKKLIYNGVTMPLTAIADFAEKGKTDPLFKELARLVEETHGIWNEQAEKYLLAQFGVDI GEAAQ >gi|299857060|gb|ADWS01000004.1| GENE 147 154171 - 155559 1520 462 aa, chain - ## HITS:1 COG:ECs3808 KEGG:ns NR:ns ## COG: ECs3808 COG2213 # Protein_GI_number: 15833062 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Escherichia coli O157:H7 # 1 462 1 462 462 856 100.0 0 MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWLPNEHFAKIVGPMITYL LPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSMIMGPLGGLVIKYVDKALE KRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANTFVKECIEALVHAGYLPLLSV INEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMVASNPGPGLGLLLAFTLFGKGMS KRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIAGGMSGTWMFNLLDGGLVAGPSPGS IFAYLALTPKGSFLATIAGVTVGTLVSFAITSLILKMEKTVETESEDEFAQSANAVKAMK QEGAFSLSRVKRIAFVCDAGMGSSAMGATTFRKRLEKAGLAIEVKHYAIENVPADADIVV THASLEGRVKRVTDKPLILINNYIGDPKLDTLFNQLTAEHKH >gi|299857060|gb|ADWS01000004.1| GENE 148 155587 - 155946 285 119 aa, chain - ## HITS:1 COG:ECs3809 KEGG:ns NR:ns ## COG: ECs3809 COG1762 # Protein_GI_number: 15833063 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 1 119 29 147 147 198 100.0 2e-51 MVSLLDKNYISENYIQAIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGV YFPGNDEPIKLLIGLSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG >gi|299857060|gb|ADWS01000004.1| GENE 149 156345 - 158336 2472 663 aa, chain - ## HITS:1 COG:ECs3810 KEGG:ns NR:ns ## COG: ECs3810 COG0021 # Protein_GI_number: 15833064 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Escherichia coli O157:H7 # 1 663 1 663 663 1331 99.0 0 MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRF VLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGI ANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIA FYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSL LMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAG QAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKA SQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANG ISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVA SLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGG YVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESV LPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAK ELL >gi|299857060|gb|ADWS01000004.1| GENE 150 158614 - 159372 844 252 aa, chain + ## HITS:1 COG:ECs3811 KEGG:ns NR:ns ## COG: ECs3811 COG0501 # Protein_GI_number: 15833065 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 252 43 294 294 465 99.0 1e-131 MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKA TIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMT DNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASAGGIVGSLSQSQLGDLGEKLV NSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQ HIRDRMSADGVK >gi|299857060|gb|ADWS01000004.1| GENE 151 159428 - 160171 713 247 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_3062 NR:ns ## KEGG: ECIAI1_3062 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 247 4 250 250 449 100.0 1e-125 MQKINFYRNRVAINVLAKDIANAREIFDAAEGHAVIGVLSAQFSSVDEGIQEVKRWMAEI PSISVGLGAGDPAQYYKAAMIAAQIHPAHVNQTFTGCGFAAGALAATGGEQTHVNALVSP TGTPGEVLISTGVSSSQGTPARVSCDTAVRMMLDMGAHAAKFFPMGGERSLPELYALATT AARNGMTLIEPTGGIDLDNFSVILKTCLEAGVPRIMPHVYSSIIDPDTGYTRPDDVAVLL NKVKSLL >gi|299857060|gb|ADWS01000004.1| GENE 152 160158 - 161267 918 369 aa, chain - ## HITS:1 COG:STM3768 KEGG:ns NR:ns ## COG: STM3768 COG1921 # Protein_GI_number: 16767052 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 1 369 1 369 369 578 86.0 1e-165 MTQNIYQQLGLKQVINACGKMTILGVSSVAPEVMQATARAASSFVEIDQLVDKTGELVSR FTGAEDSYVTSCASAGIAIAVAAAITRGDKARVALMPDSSGMANEVVMLRGHNVDYGASI LSAIRLGGGRVVEVGSSNLAALWQLESAITDATVALLYVKSHHCVQKGMLNIEDFAHVAQ MYNLPLIVDAAAEEDLRAWVVSGADMVVYSGAKAFNAPTSGFITGKKIWIAACKAQHHGI ARAMKIGKENMVGLVYALENYHQGQAVITAEQLQPVVEAISAIHGLTADIEQDEAGRAIW RIRIRVNAQELGVDARVVEAQLRGGDIAIYARRYNLHQGVFSLDPRTVAEGEMALIVARL KEIADHAKD >gi|299857060|gb|ADWS01000004.1| GENE 153 161271 - 162128 1114 285 aa, chain - ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 1 285 2 286 286 507 96.0 1e-144 MSDDVMQHELVERARESGTLTKADITKAWFIYWLGAEVSSSYERLQSLIFCASMTPIIKK LYPQKEEQVEALKRHLNFFNSEQTFGAVIQGISIAMEEQKTRGEAINDASITGIKTGLMG PLAGMGDSIIWAAVMPLLIAIFIPFAANGSAMGGILPLILYPAITLAISYGMVHKGYTLG RDSIISLLQGGRIKELIYGANVLGLIMMGALSASFVKITSPLKISALKGSEVVVQQILDS IAPGLLPLAAVFAIYFYLVKKGPRYTTILLSIVALSVVCSLLGVL >gi|299857060|gb|ADWS01000004.1| GENE 154 162128 - 162877 974 249 aa, chain - ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 249 1 249 249 421 96.0 1e-118 MDTLLFASLMGLYYWFARLRLGYTFSAMLLQPVVVAVFVGLLLGNMPAAMIIGAGMQLVY LGVTSTPGGNVPSDPALAACIAIPIAVKANMDPNLAIALAIPFGVIGVFLDQLRRTLNAA WVHMADKHAETANMSAIMRCAFLYPALLGLVLRFPVVFAANYFGQNVVESFLKLMPHWLT HSFEIMGGILPALGFAITIMVIGKKSLLPWFIGGFFAVLYLKVDIMAMAIFGTCVAFLIK GLAKNEGAA >gi|299857060|gb|ADWS01000004.1| GENE 155 162903 - 163388 688 161 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 295 91.0 3e-80 MANIVLCRIDSRLIHGQVVTKWVGQSQANRIAVVSDELDADPFMKNIYLMAAPPNIKVDC FSNQSFAAAWKENQLGDGNVLVLFPSLAAIQEAVQQGFDVADIQVGGLGGGPNRKAVFQN ITLDEKDVGILNDLKSRGIKAVFQTIPEDKPQSLDDILKKF >gi|299857060|gb|ADWS01000004.1| GENE 156 163399 - 163827 485 142 aa, chain - ## HITS:1 COG:STM3772 KEGG:ns NR:ns ## COG: STM3772 COG2893 # Protein_GI_number: 16767056 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 142 1 139 141 228 85.0 3e-60 MTTTVPIHPLPEILLLTHGGWGLQLCNSLRMVMGEIEGVTEIALMPVDTLGEFYQRVEAV VKTMPEGSLIVTDFIGGTTSNVAARLSADYPVAVISGLNASLLLEALDKREHGPLTACVA DLVEAGRNSCLDVVSHIRQLQQ >gi|299857060|gb|ADWS01000004.1| GENE 157 163946 - 166744 1852 932 aa, chain - ## HITS:1 COG:STM3773_2 KEGG:ns NR:ns ## COG: STM3773_2 COG3933 # Protein_GI_number: 16767057 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 461 932 1 472 472 870 92.0 0 MRRIDVIHKELERLTYGLELSDLAKEKAFTAEAIGFNLGLARNSVSKDLNQLWNEGLVVK SQGRPVFFLHRHALELLINRKLDDCECIVHSVASLLPKKEKYTDDDPFSGLIGYDRSLRD AVEKGRAAVLYPHGLHVLLTGASGVGKTFFAELMHCFACKHTIGSPPPLVYFNCAEYAHN PELLSSHLFGHHKGAFTGASENKTGLVEQADGGYLLLDEVHRLPYEGQEKLFSILDKGEY RPLGSSGPTYSISVRLICATTESVNSALLRTFQRRIQVCIDLPGIRQRSVEEQLELIVSF FQRESRKIERTISLDKTLLHWLLSNPLEGNIGQLKSDIQFLCAQAWASGMTERNDTLELD KRLAEMSFNTTPEQRLLVDALFGGKDRLNVDARTLPALKNSLATSAEIEESDLFYSFLTR EYVNLRNSNVPPAETLAILKNKLSSIFEYGLYSRHSAAHPPRYGDQIEERVTLLIGYVEQ VLGFTLPENLANPLRKHFLALIGYVRRGLIPQLYSSSLILDRCKDEYDNATLLCRKINEL LHIQCPATEVVWLCLFLKECRHYRQRIDTSPDCGVILIAHGATTATSQAQYVNRVLERDL FYAIDMPFEQSVHDTLETLTRMIQDRCWQRLILMVDIGSLVHFGSTISKLFQIDVLLLPN ITLTSLLEVGLDLSYETGDLSQLAVLMQSKNIPCRLCTPQQESGGKVLVISCITGMGTAE KIKKVLEESFGELMSQDTRMVILDYNEVRSLERIQQALNASERLAGIVGTFQPGLPDIPF ISLEELFSEQGPELVLSLLTPDLSSSERRLEMERSAMRFISALTMESIINHISVLNPQRI LKEIEDVLNYLTNTLSLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALENRLDLDARAF SVIKSSFLPIEEAYAIRLSDAEYFYIYELLYS >gi|299857060|gb|ADWS01000004.1| GENE 158 167003 - 167923 1300 306 aa, chain - ## HITS:1 COG:ECs3812 KEGG:ns NR:ns ## COG: ECs3812 COG0010 # Protein_GI_number: 15833066 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 616 100.0 1e-176 MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIR QVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRML SFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPKEGLIDPNH SVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAP GTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQ AAKKGE >gi|299857060|gb|ADWS01000004.1| GENE 159 168059 - 168790 574 243 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3280 NR:ns ## KEGG: EcE24377A_3280 # Name: not_defined # Def: putative lipoprotein # Organism: E.coli_E24377A # Pathway: not_defined # 1 243 1 243 243 459 99.0 1e-128 MKKWKVRSALVALIVLLAGCSSNAQYNSSASGNVGTAWGGDVHSSVQGVSAERAWRDPAE MIVISYSTNVPSGYDRVYSIRINELEYAIRDGNFNSLPITRVYDSSNNEPRYIVHARVGM NYQLYVRNYSRNTNYEIVATVDGMDVLNGKQGSLNNNGYIVNAGDSLAIKGFRKDKHTEA AFQFANVADSYAANSAQGDVRNTGVIGFAAFELQGPAQNALPPCSGQAFPADNNGYAPPP CRK >gi|299857060|gb|ADWS01000004.1| GENE 160 168936 - 170912 2293 658 aa, chain - ## HITS:1 COG:ECs3814 KEGG:ns NR:ns ## COG: ECs3814 COG1166 # Protein_GI_number: 15833068 # Func_class: E Amino acid transport and metabolism # Function: Arginine decarboxylase (spermidine biosynthesis) # Organism: Escherichia coli O157:H7 # 1 658 1 658 658 1363 100.0 0 MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWWGNNYYDVNELGHISVC PDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDY FLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYI RLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARLASQGSGKWQSSGGEK SKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKL GVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEENGLPHPTVITE SGRAVTAHHTVLVSNIIGVERNEYTVPTAPAEDAPRALQSMWETWQEMHEPGTRRSLREW LHDSQMDLHDIHIGYSSGTFSLQERAWAEQLYLSMCHEVQKQLDPQNRAHRPIIDELQER MADKMYVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDG DGIATTMPMPEYDPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELS DEGDTVADMLQYVQLDPKTLLTQFRDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE >gi|299857060|gb|ADWS01000004.1| GENE 161 171707 - 172861 1298 384 aa, chain + ## HITS:1 COG:ECs3818 KEGG:ns NR:ns ## COG: ECs3818 COG0192 # Protein_GI_number: 15833072 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Escherichia coli O157:H7 # 1 384 1 384 384 781 100.0 0 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTS AWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQ GLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVG IDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDC GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVS YAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGH FGREHFPWEKTDKAQLLRDAAGLK >gi|299857060|gb|ADWS01000004.1| GENE 162 173297 - 174691 1678 464 aa, chain + ## HITS:1 COG:galP KEGG:ns NR:ns ## COG: galP COG0477 # Protein_GI_number: 16130844 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 464 1 464 464 852 100.0 0 MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSS MMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVG VASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGAWRWMLGVIIIP AILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESLQVKQSGWA LFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTN VLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQYFAIAMLLMFIV GFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFWV YAALNVLFILLTLWLVPETKHVSLEHIERNLMKGRKLREIGAHD >gi|299857060|gb|ADWS01000004.1| GENE 163 174810 - 175265 423 151 aa, chain + ## HITS:1 COG:ECs3820 KEGG:ns NR:ns ## COG: ECs3820 COG3091 # Protein_GI_number: 15833074 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 151 15 165 165 289 99.0 2e-78 MRRLREKLAQANLKLGRNYPEPKLSYTQRGTSAGTAWLESYEIRLNPVLLLENSEAFIEE VVPHELAHLLVWKHFGRVAPHGKEWKWMMESVLGVPARRTHQFELQSVRRNTFPYRCKCQ EHQLTVRRHNRVVRGEAVYRCVHCGEQLVAK >gi|299857060|gb|ADWS01000004.1| GENE 164 175360 - 176067 528 235 aa, chain + ## HITS:1 COG:endA KEGG:ns NR:ns ## COG: endA COG2356 # Protein_GI_number: 16130846 # Func_class: L Replication, recombination and repair # Function: Endonuclease I # Organism: Escherichia coli K12 # 1 235 1 235 235 446 100.0 1e-125 MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPGTFYCGCKINWQGKKGV VDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGGRKNCAKDPVYRKMESDMH NLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEKAAEPPARARGAIARTYFYMR DQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKVQGNHNPYVQRACQARKS >gi|299857060|gb|ADWS01000004.1| GENE 165 176147 - 176878 554 243 aa, chain + ## HITS:1 COG:ECs3822 KEGG:ns NR:ns ## COG: ECs3822 COG1385 # Protein_GI_number: 15833076 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 243 10 252 252 485 99.0 1e-137 MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKK SVEVKVLEGKIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD SERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLHPRASNSIN TLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG DLG >gi|299857060|gb|ADWS01000004.1| GENE 166 176891 - 177841 343 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme [Shewanella piezotolerans WP3] # 7 310 6 319 345 136 31 7e-31 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVK QNYEEWFSFVGEQDLPLVDLDVILMRKDPPFDTEFIYATYILERAEEKGTLIVNKPQSLR DCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILKPLDGMGGASIFRVKEGDPNL GVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEPVPYCLARIPQGGETRGNLAAGG RGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIGDRLTEINVTSPTCIREIEAEFPVS ITGMLMDAIEARLQQQ >gi|299857060|gb|ADWS01000004.1| GENE 167 177950 - 178513 594 187 aa, chain + ## HITS:1 COG:ECs3824 KEGG:ns NR:ns ## COG: ECs3824 COG1678 # Protein_GI_number: 15833078 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 187 25 211 211 374 100.0 1e-104 MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPE PRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQ PSDVLVALGYASWEKGQLEQEILDNAWLTAPADLNILFKTPIADRWREAAKLIGVDILTM PGVAGHA >gi|299857060|gb|ADWS01000004.1| GENE 168 178513 - 178929 465 138 aa, chain + ## HITS:1 COG:ECs3825 KEGG:ns NR:ns ## COG: ECs3825 COG0816 # Protein_GI_number: 15833079 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 276 99.0 1e-74 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVG LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK VDSASAVIILESYFEQGY >gi|299857060|gb|ADWS01000004.1| GENE 169 179105 - 180085 779 326 aa, chain - ## HITS:1 COG:yggR KEGG:ns NR:ns ## COG: yggR COG2805 # Protein_GI_number: 16130851 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Escherichia coli K12 # 1 326 16 341 341 612 98.0 1e-175 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAIL LENGQLDFAVSLAENQRLRGSAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYIYASQRCLIQQREIGLHCM TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH VIQTGQQVGMLTFQQSYQQRVGEGRL >gi|299857060|gb|ADWS01000004.1| GENE 170 180103 - 180807 635 234 aa, chain + ## HITS:1 COG:ECs3826 KEGG:ns NR:ns ## COG: ECs3826 COG0325 # Protein_GI_number: 15833081 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 456 100.0 1e-128 MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQ EGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAEL PPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRLRGLMAIPAPESEYVRQFEVA RQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK >gi|299857060|gb|ADWS01000004.1| GENE 171 180825 - 181391 719 188 aa, chain + ## HITS:1 COG:ECs3828 KEGG:ns NR:ns ## COG: ECs3828 COG0762 # Protein_GI_number: 15833082 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 272 100.0 2e-73 MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGP IDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWVS QGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYVINMGVAEVLQATGNML LPGLWMAL >gi|299857060|gb|ADWS01000004.1| GENE 172 181388 - 181678 312 96 aa, chain + ## HITS:1 COG:ECs3829 KEGG:ns NR:ns ## COG: ECs3829 COG1872 # Protein_GI_number: 15833083 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 96 5 100 100 174 98.0 5e-44 MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFR VAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN >gi|299857060|gb|ADWS01000004.1| GENE 173 181686 - 182279 1005 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157155704|ref|YP_001464307.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Escherichia coli E24377A] # 1 197 1 197 197 391 100 1e-107 MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKV TGLPAIADDSGLAVDVLGGAPGIYSARYSGEDATDLKNLQKLLETLKDVPDDQRQARFHC VLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSAI SHRGQALKLLLDALRNG >gi|299857060|gb|ADWS01000004.1| GENE 174 182272 - 183408 984 378 aa, chain + ## HITS:1 COG:yggW KEGG:ns NR:ns ## COG: yggW COG0635 # Protein_GI_number: 16130856 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli K12 # 1 378 1 378 378 789 98.0 0 MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVK TIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNR ISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDL RQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQYETSA YAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQGRYLESQR DVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDVIRPQLDEAIAQGYLTECADYWQI TEHGKLFLNSLLELFLAE >gi|299857060|gb|ADWS01000004.1| GENE 175 183650 - 184657 826 335 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3539 NR:ns ## KEGG: ECO103_3539 # Name: yggM # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 335 1 335 335 601 100.0 1e-170 MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILKLDAITLKNLDAKGNQA TWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAMLTSKGTPASGWSVNFYSF QAAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALNTQKNSIPALEKEVKALDKQM VAAQKAADAYWGKDANGKQMTREEAFKKIHQQRDEFNKQNDSEAFAVKYDKEVYQPAIAA CHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLSRKLQDDWVTLEKGQYPLTMKVSEI NSKKVAILMKIDDINQANERWKKDTEQLRRNGVIK >gi|299857060|gb|ADWS01000004.1| GENE 176 184774 - 185820 1296 348 aa, chain - ## HITS:1 COG:ECs3833 KEGG:ns NR:ns ## COG: ECs3833 COG0252 # Protein_GI_number: 15833087 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 613 99.0 1e-175 MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATKSNYTAGKVGVENLVNA VPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYF LDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGR DVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVY NYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKNGTAVVRSSRVPTGAT TQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFNQY >gi|299857060|gb|ADWS01000004.1| GENE 177 185996 - 186712 930 238 aa, chain - ## HITS:1 COG:no KEGG:ECO111_3709 NR:ns ## KEGG: ECO111_3709 # Name: yggN # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 238 2 239 239 429 100.0 1e-119 MRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGENGNLVITPDGNVMYNGK QYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIALDKIIVQEMGESSKMRSRLT KLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLVNQAMGGILQDSINEMGAKAVL KSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGKDVCSRVVTLEDSRKALVGNLK >gi|299857060|gb|ADWS01000004.1| GENE 178 186899 - 187225 485 108 aa, chain - ## HITS:1 COG:yggL KEGG:ns NR:ns ## COG: yggL COG3171 # Protein_GI_number: 16130860 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 108 11 118 118 202 100.0 1e-52 MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINEVIEPNKLAFDGS GYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSELFDVWWD >gi|299857060|gb|ADWS01000004.1| GENE 179 187225 - 187944 777 239 aa, chain - ## HITS:1 COG:yggH KEGG:ns NR:ns ## COG: yggH COG0220 # Protein_GI_number: 16130861 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Escherichia coli K12 # 1 239 1 239 239 491 100.0 1e-139 MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPVMGVEFSEDMLDFPALF GREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCH DAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD WEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVK >gi|299857060|gb|ADWS01000004.1| GENE 180 188105 - 189157 1089 350 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase [Haemophilus influenzae R2846] # 6 343 11 366 378 424 58 1e-117 MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFP TVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRS TAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERF NQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWSLYPGKKPKQTLPERTGYFLLLQH EDEVLLAQRPPSGLWGGLYCFPQFADEESLRHWLAQRQIAADNLTQLTAFRHTFSHFHLD IVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLAAPVERLLQQLRTGAPV >gi|299857060|gb|ADWS01000004.1| GENE 181 189185 - 189460 372 91 aa, chain + ## HITS:1 COG:STM3111 KEGG:ns NR:ns ## COG: STM3111 COG2924 # Protein_GI_number: 16766412 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Salmonella typhimurium LT2 # 1 91 1 91 91 161 94.0 3e-40 MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQHKQTMLINEKKLNMMNA EHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK >gi|299857060|gb|ADWS01000004.1| GENE 182 189522 - 190604 1004 360 aa, chain + ## HITS:1 COG:mltC KEGG:ns NR:ns ## COG: mltC COG0741 # Protein_GI_number: 16130864 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli K12 # 1 360 1 360 360 690 100.0 0 MMKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQFAHNIENIWGFKEVVI AGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLY SDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLKNRLKSRSNGLRIIYSVTIN MVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQH TAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAY NGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR >gi|299857060|gb|ADWS01000004.1| GENE 183 190806 - 192062 1407 418 aa, chain + ## HITS:1 COG:ECs3840 KEGG:ns NR:ns ## COG: ECs3840 COG0477 # Protein_GI_number: 15833094 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 418 17 434 434 725 100.0 0 MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPALLGI VADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILINSFAYMPTLGLINTISYYR LQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHMQLYIGAALSAILVLFTLTLP HIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSMLLGAELQITNMFGNTFLHSFDK DPMFASSFIVQHASIIMSISQISETLFILTIPFFLSRYGIKNVMMISIVAWILRFALFAY GDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVEKEVSPAIRASAQGMFLMMTNGFGCIL GGIVSGKVVEMYTQNGITDWQTVWLIFAGYSVVLAFAFMAMFKYKHVRVPTGTQTVSH >gi|299857060|gb|ADWS01000004.1| GENE 184 192112 - 194247 1588 711 aa, chain - ## HITS:1 COG:ECs3841 KEGG:ns NR:ns ## COG: ECs3841 COG1982 # Protein_GI_number: 15833095 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 711 21 731 731 1488 99.0 0 MKSMNIAASSELVSRLSSHRRVVALGDTDFTDVAAVVITAADSRSGILALLKRTGFHLPV FLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLLPPFYDTLTQYVEMGNSTFAC PGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVFH ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNP FGFIGGIDAHCFNEEYLRQQIRDVAPEKAELPRPFRLAIIQLGTYDGTVYNARQVIDTVG HLCDYILFDSAWVGYEQFIPMMADSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHK KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVELG IESRKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAADQ YFVDPCKLLLTTPGINAETGEYSDFGVPATILAHYLRENGIVPEKCDLNSILFLLTPAES HEKLAQLVAMLAQFEQHIEDDSPLAEVLPSVYNKYPVRYRDYTLRQLCQEMHDLYVSFDV KDLQKAMFRQQSFPSVVMNPQDAHSAYIRGEVELVRIRDAEGRIAAEGALPYPPGVLCVV PGEVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDADGMKRLYGYVLK >gi|299857060|gb|ADWS01000004.1| GENE 185 194645 - 195352 545 235 aa, chain + ## HITS:1 COG:ECs3842 KEGG:ns NR:ns ## COG: ECs3842 COG1811 # Protein_GI_number: 15833096 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 333 99.0 2e-91 MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLGIGILLVVKCANLPAMV LATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPAHESFIQNYVAIIVLFCASGTGI FGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVISIPLLIIQLTLAWAAALILP LTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLPALLLAMPLSAAWTAWFA >gi|299857060|gb|ADWS01000004.1| GENE 186 195682 - 196218 461 178 aa, chain - ## HITS:1 COG:yghD KEGG:ns NR:ns ## COG: yghD COG3149 # Protein_GI_number: 16130868 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulM # Organism: Escherichia coli K12 # 1 178 1 178 178 322 94.0 2e-88 MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPL SERIEQQETMLQQLVAMNTRLRSAAPDIMAARKSATTTPAQVSRVISDSASAHSVVIKRI AERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDASAAEKTGMVNVQRLEFGRG >gi|299857060|gb|ADWS01000004.1| GENE 187 196220 - 197398 659 392 aa, chain - ## HITS:1 COG:yghE KEGG:ns NR:ns ## COG: yghE COG3297 # Protein_GI_number: 16130869 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulL # Organism: Escherichia coli K12 # 107 392 1 286 286 542 99.0 1e-154 MSSILEIFFPLCAADPIHWQRRTPDVEHGIWSDVANEQLQQWLQTDAIRLYIPGEWISVW QVELPDVARKQIPTILPALLEEELNQDIDELHFAPLNIDQQLATVAVIHQQHMRNIAQWL QENGITRATVAPDWMSIPCGFMACDAQRVICRIDECRGWSAGLALAPVMFRAQLNEQDLP LSLTVVGIAPEKLSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARW RVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMA LKKYRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQILHLQLRAANFASFDK LRSALATDYVVQQDALQKEGDAVSGGVTLRRK >gi|299857060|gb|ADWS01000004.1| GENE 188 197395 - 198372 954 325 aa, chain - ## HITS:1 COG:VC2726 KEGG:ns NR:ns ## COG: VC2726 COG3156 # Protein_GI_number: 15642720 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulK # Organism: Vibrio cholerae # 7 305 5 307 336 212 43.0 1e-54 MITSPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQEYQQALWYSASAESLA LSALSLSLKNEKRVHLEQPWASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTASRPL AVQQLIALITRLDVPAYRAELIAESLWEFIDEDRSVQTRLGREDSEYLARSVPFYAANQP LADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFDPWLSPVQ ARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQLKTVLSVDSNYFWLRSDITVNEIEL TMNSLIVRMGPQHFSVLWHQTGESE >gi|299857060|gb|ADWS01000004.1| GENE 189 198375 - 198974 498 199 aa, chain - ## HITS:1 COG:VC2727 KEGG:ns NR:ns ## COG: VC2727 COG4795 # Protein_GI_number: 15642721 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Vibrio cholerae # 2 197 10 207 221 117 38.0 9e-27 MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTH DLTQMMPRPVRGDQGQREPALLAGAGVLASESEGMRFVRGGVVNPLMRLPRSNLLTVGYR IHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDGTRWQESWSSVQAIPVAVRMT LHSPQWGEIERIWLLRGPQ >gi|299857060|gb|ADWS01000004.1| GENE 190 198971 - 199342 333 123 aa, chain - ## HITS:1 COG:VC2728 KEGG:ns NR:ns ## COG: VC2728 COG2165 # Protein_GI_number: 15642722 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Vibrio cholerae # 2 112 4 112 117 79 41.0 2e-15 MKRGFTLLEVMLALAIFALAATAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTR EQRAVRQQGESDMAGSRWYWRTTPLSTGNALLQAVDIEVSLHEDFSSVIQSRRAWFSAVG GQQ >gi|299857060|gb|ADWS01000004.1| GENE 191 199339 - 199869 352 176 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3374 NR:ns ## KEGG: EC55989_3374 # Name: not_defined # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_55989 # Pathway: Bacterial secretion system [PATH:eck03070] # 1 176 12 187 187 334 100.0 6e-91 MLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGKTLGVLIDPPGY QFMQRRQGQWSPVSSTRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELE LQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNACWAVKLAHDGALSLNQCDERMP >gi|299857060|gb|ADWS01000004.1| GENE 192 199906 - 200361 613 151 aa, chain - ## HITS:1 COG:VC2730 KEGG:ns NR:ns ## COG: VC2730 COG2165 # Protein_GI_number: 15642724 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Vibrio cholerae # 6 151 2 146 146 230 76.0 8e-61 MNSLSRTQKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENAL DMYRLDNGRYPTTEQGLEALIQQPANMADSRNYRTGGYIKRLPKDPWGNDYQYLSPGEKG LFDVYTLGADGQENGEGAGADIGNWNLQEFQ >gi|299857060|gb|ADWS01000004.1| GENE 193 200378 - 201601 1195 407 aa, chain - ## HITS:1 COG:VC2731 KEGG:ns NR:ns ## COG: VC2731 COG1459 # Protein_GI_number: 15642725 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Vibrio cholerae # 1 405 1 404 406 418 56.0 1e-116 MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEARMNTSSGGMLQRRRHA HRRVAAADLALFTRQLATLVQAAMPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLS DSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQRQRLKSRLLQAMLYPLVLLV VATGVVTILLTAVVPKIIEQFDHLGHALPASTRTLIAMSDALQASGVYWLAGLLGLLVLG QRLLKNPAMRLRWDQTVLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVS ANRYVEQQLLLAADRVREGSSLRAALAELRLFPPMMLYMIASGEQSGELETMLEQAAVNQ EREFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPMLQLNNMVGM >gi|299857060|gb|ADWS01000004.1| GENE 194 201601 - 203094 1496 497 aa, chain - ## HITS:1 COG:VC2732 KEGG:ns NR:ns ## COG: VC2732 COG2804 # Protein_GI_number: 15642726 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Vibrio cholerae # 14 497 16 503 503 635 67.0 0 MVPVAQETTANTVRLPYSFSRRFSLVAWCEASLEILHVHPLSLSVLQELQRGLNAPFTLR QIDEAEFEQRLNAVWQRDSSEARQLMEDLGSAEDFFTLAEELPETEDLLESDDDAPIIKL INAMLAEAIKEGASDIHIETFEKSLVIRFRVDGTLHEMLRPGRKLASLLVSRIKVMARLD IAEKRVPQDGRIALLLGGRAIDVRVSTMPSAWGERVVLRLLDKNQARLTLERLGLSQQLT AQLRQLLHKPHGIFLVTGPTGSGKSTTLYAGLQELNNHSRNILTVEDPIEYMIEGIGQTQ VNTRVGMTFARGLRAILRQDPDVVMVGEIRDTETAEIAVQASLTGHLVLSTLHTNTAVGA ITRLQDMGVEPFLLSSSLTGVMAQRLVRTLCPDCRQPAPATDEEKRLLGITDARTVTLYH PQGCPACNHKGFRGRTAIHELIVVDATLRDLIHRQAGELELERYVRQHSAGIRSNGIEKV LAGETSLDEVLRVTMEA >gi|299857060|gb|ADWS01000004.1| GENE 195 203094 - 205154 2179 686 aa, chain - ## HITS:1 COG:gspD KEGG:ns NR:ns ## COG: gspD COG1450 # Protein_GI_number: 16131204 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Escherichia coli K12 # 18 665 5 639 654 502 44.0 1e-142 MFWRDITLSVWRKKTTGLKTKKRLLPLVLAAALCSSPVWAEEATFTANFKDTDLKSFIET VGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKS SAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELAPILRQMIDSAGSGNVVNYDPS NVIMLTGRASVVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSGENQPA TLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDV LKQVSGTLTAAKEEAEGTVGSGREIVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRR AQVHVEALIVEVAEGSNINFGVQWASKDAGLMQFANGTQIPIGTLGAAISQAKPQKGSTV ISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSI TTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVI EQEVSKVEGQTSLDVVFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLI GNLFKSTADKKEKRNLMVFIRPTILRDGMAADGVSQRKYNYMRAEQIYRDEQGLSLMPHT AQPVLPAQNQALPPEVRAFLNAGRTR >gi|299857060|gb|ADWS01000004.1| GENE 196 205184 - 206143 621 319 aa, chain - ## HITS:1 COG:yghF KEGG:ns NR:ns ## COG: yghF COG3031 # Protein_GI_number: 16130870 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulC # Organism: Escherichia coli K12 # 44 319 1 276 288 504 94.0 1e-143 MARVVFRDARIYLIQWLTKIRHTLNQRQSFNTDKEHLRKIVRGMFWLMLLIISAKVAHSL WRYFSFSAEYTDVSPSANKPPRADAKTFDKNDVQLISQQNWFGKYQPVATPVKQPEPVPV AETRLNVVLRGIAFGARPGAVIEEGGKQQVYLQGETLGSHNAVIEEINRDHVMLRYQGKI ERLSLAEEERSTVAATNKKAVSDEAKQAVAEPAVSAPVEIPTAVRQALAKDPQKIFNYIQ LTPVRKEGIVGYAVKPGADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDS IQLTVLRKGARHDISIALR >gi|299857060|gb|ADWS01000004.1| GENE 197 206161 - 206571 280 136 aa, chain - ## HITS:1 COG:no KEGG:JW2938 NR:ns ## KEGG: JW2938 # Name: yghG # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 136 1 136 136 227 100.0 1e-58 MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQ SSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGN QYQRKLDRTTCGIVKA >gi|299857060|gb|ADWS01000004.1| GENE 198 206637 - 207446 459 269 aa, chain - ## HITS:1 COG:pppA KEGG:ns NR:ns ## COG: pppA COG1989 # Protein_GI_number: 16130872 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Escherichia coli K12 # 1 269 42 310 310 476 96.0 1e-134 MLFDVFQQYPAAMPILATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMPSAQSKISLA LPRSHCPHCQQTIRIRDNIPLLSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVW PESGWALAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTG VLVGFIAFYSLRWIAGVVLRKEALGMGDVLLFAALGSWVGPLSLPNVALIASCCGLIYAV ITKRGSTTLPFGPCLSLGGIATIYLQALF >gi|299857060|gb|ADWS01000004.1| GENE 199 207594 - 212162 4246 1522 aa, chain - ## HITS:1 COG:no KEGG:ECSE_3249 NR:ns ## KEGG: ECSE_3249 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 1522 1 1522 1522 2897 98.0 0 MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTP EPTPDPEPTPEPTPDPEPTPEPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTP GDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDAQELAGSDNKKSNALSLVTSM NSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTS PVVPVTTPGTKPDLNASFVSANAEQFYQYQPSEIILSEGRLVDSQGYGVAGVNYYTNSGR GVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTT GQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLDEGEQVVNLPNEFIEQFKTGQAK EIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNF YGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPEN VTRDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPD DMKNFMENVLRYLSDDKWTPDAKASMTVGTNLDTVYFKRHGQVTGNSAAFDFHPDFAGIS VEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYLN KGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPNRVRQQRATGI WVYERYPAVDGALPYTIDSKTGEVKWKYQVENKPDDKPKLEVASWLEDVDGKQETRYAFI DEADHKTEDSLKAAKEKIFAAFPGLKECTNPAYHYEVNCLEYRPGTGVPVTGGMYVPQYT QLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSCVDLERLYQNMSVWLWN DTSYRYEEGKNDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAG MMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKW FAGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSL DASGTVKFKVPYGGLIYIKGNSSTNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELE SDAFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDSEDGKHRMFTYKNLPGH KHRFANDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPG ATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQLKE WAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKNYCAES NGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLK LPKPEQGPETINKVTEHKMSVE >gi|299857060|gb|ADWS01000004.1| GENE 200 212647 - 214329 1674 560 aa, chain - ## HITS:1 COG:yghK KEGG:ns NR:ns ## COG: yghK COG1620 # Protein_GI_number: 16130875 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Escherichia coli K12 # 1 560 1 560 560 912 99.0 0 MVTWTQMYMPMGGLGLSALVALIPIIFFFVALAVLRLKGHVAGAITLILSILIAIFAFKM PIDMAFAAAGYGFIYGLWPIAWIIVAAVFLYKLTVASGQFDIIRSSVISITDDQRLQVLL IGFSFGALLEGAAGFGAPVAITGALLVGLGFKPLYAAGLCLIANTAPVAFGALGVPILVA GQVTGIDPFHIGAMAGRQLPFLSVLVPFWLVAMMDGWKGVKETWPAALVAGGSFAVTQFF TSNYIGPELPDITSALVSIVALALFLKVWRPKNTETAISMGQSAGAMVVNKPSSGGPVPS EYSLGQIIRAWSPFLILTVLVTIWTMKPFKALFAPGGAFYSLVINFQIPHLHQQVLKAAP IVAQPTPMDAVFKFDPLSAGGTAIFIAAIISIFILGVGIKKGIGVFAETLISLKWPILSI GMVLAFAFVTNYSGMSTTLALVLAGTGVMFPFFSPFLGWLGVFLTGSDTSSNALFGSLQS TTAQQINVSDTLLVAANTSGGVTGKMISPQSIAVACAATGMVGRESELFRYTVKHSLIFA SVIGVITLLQAYVFTGMLVS >gi|299857060|gb|ADWS01000004.1| GENE 201 214684 - 216855 2571 723 aa, chain - ## HITS:1 COG:glcB KEGG:ns NR:ns ## COG: glcB COG2225 # Protein_GI_number: 16130876 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Escherichia coli K12 # 1 723 1 723 723 1470 99.0 0 MSQTITQGRLRIDANFKRFVDEEVLPGTGLDAAAFWRNFDEIVHDLAPENRQLLAERDRI QAALDEWHRSNPGPVKDKAAYKSFLRELGYLVPQLERVTVETTGIDSEITSQAGPQLVVP AMNARYALNAANARWGSLYDALYGSDIIPQEGAMVSGYDPQRGEQVIAWVRRFLDESLPL ENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVGYRGDAAAPTCILLKNNGLHIEL QIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVAAVDAEDKILLYRNLLGLMQGTLQE KMDKNGRQIVRKLNDDRQYTAADGSEISLHGRSLLFIRNVGHLMTIPVIWDSEGNEIPEG ILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTL KMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPMLRKNQMKSTP WIKAYERNNVLSGLFCGLRGKAQIGKGMWAMPDLMADMYSQKGDQLRAGANTAWVPSPTA ATLHALHYHQTNVQSVQANIAQTEFNAEFEPLLDDLLTIPVAENANWSAQEIQQELDNNV QGILGYVVRWVEQGIGCSKVPDIHNVALMEDRATLRISSQHIANWLRHGILTKEQVQASL ENMAKVVDQQNAGDPAYRPMAGNFANSCAFKAASDLIFLGVKQPNGYTEPLLHAWRLREK ESH >gi|299857060|gb|ADWS01000004.1| GENE 202 216877 - 217281 588 134 aa, chain - ## HITS:1 COG:glcG KEGG:ns NR:ns ## COG: glcG COG3193 # Protein_GI_number: 16130877 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol # Organism: Escherichia coli K12 # 1 118 1 118 134 198 100.0 2e-51 MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLALSRMDDCAPIAAYISQE KARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVVVDGQIIGAVGVSGLTGAQ DAQVAKAAAAVLAK >gi|299857060|gb|ADWS01000004.1| GENE 203 217286 - 218509 1053 407 aa, chain - ## HITS:1 COG:glcF_2 KEGG:ns NR:ns ## COG: glcF_2 COG0247 # Protein_GI_number: 16130878 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli K12 # 16 407 1 392 392 775 99.0 0 MQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE GNEVTLKTQEHLDRCLTCRNCETTCPSGVRYHNLLDIGRDIVEQKVKRPLPERILREGLR QVVPRPAVFRALTQVGLVLRPFLPEQVRAKLPAETVKAKPRPPLRHKRRVLMLEGCAQPT LSPNTNAATARVLDRLGISVMSANEAGCCGAVDYHLNAQEKGLARARNNIDAWWPAIEAG AEAILQTASGCGAFVKEYGQMLKNDALYADKARQVSELAVDLVELLREEPLEKLAVRGDK KLAFHCPCTLQHAQKLNGEVEKVLLRLGFTLTDVPDSHLCCGSAGTYALTHPDLARQLRD NKMNALESGKPEMIVTANIGCQTHLASAGRTSVRHWIEIVEQALEKE >gi|299857060|gb|ADWS01000004.1| GENE 204 218520 - 219572 970 350 aa, chain - ## HITS:1 COG:glcF_1 KEGG:ns NR:ns ## COG: glcF_1 COG0277 # Protein_GI_number: 16130878 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli K12 # 1 318 1 318 369 634 98.0 0 MLRECDYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPVTGQTLDVRCHRGIVNYDPTE LVITARAGTPLVAIEAALESAGQMLPCEPPHYGEEATWGGMVACGLAGPRRPWSGSVRDF VLGTRIITGAGKHLRFGGEVMKNVAGYDLSRLMAGSYGCLGVLTEISMKVLPRPRASLSL RREISLQEAMNEIAQWQLQPLPISGLCYFDNALWIRLEGGEGSVKAARELLGGEEVAGQF WQQLREQQLPFFSLPGTLWRISLPSDAPMMDLPGEQLIDWGGALRWLKSTAEDNQIHRIA RNAGGHATRFSAGDGGFAPLSAPLFRYHQQLKQQLDPCGVFNPGRMYAEL >gi|299857060|gb|ADWS01000004.1| GENE 205 219572 - 221071 1509 499 aa, chain - ## HITS:1 COG:glcD KEGG:ns NR:ns ## COG: glcD COG0277 # Protein_GI_number: 16130879 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli K12 # 1 499 1 499 499 1002 100.0 0 MSILYEERLDGALPDVDRTSVLMALREHVPGLEILHTDEEIIPYECDGLSAYRTRPLLVV LPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGVLLVMARFKEILDINPVGR RARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLL KIEVQTLDGEALTLGSDALDSPGFDLLALFTGSEGMLGVTTEVTVKLLPKPPVARVLLAS FDSVEKAGLAVGDIIANGIIPGGLEMMDNLSIRAAEDFIHAGYPVDAEAILLCELDGVES DVQEDCERVNDILLKAGATDVRLAQDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPR RALPGVLEGIARLSQQYDLRVANVFHAGDGNMHPLILFDANEPGEFARAEELGGKILELC VEVGGSISGEHGIGREKINQMCAQFNSDEITTFHAVKAAFDPDGLLNPGKNIPTLHRCAE FGAMHVHHGHLPFPELERF >gi|299857060|gb|ADWS01000004.1| GENE 206 221322 - 222086 514 254 aa, chain + ## HITS:1 COG:glcC KEGG:ns NR:ns ## COG: glcC COG2186 # Protein_GI_number: 16130880 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 254 1 254 254 472 100.0 1e-133 MKDERRPICEVVAESIERLIIDGVLKVGQPLPSERRLCEKLGFSRSALREGLTVLRGRGI IETAQGRDSRVARLNRVQDTSPLIHLFSTQPRTLYDLLDVRALLEGESARLAATLGTQAD FVVITRCYEKMLAASENNKEISLIEHAQLDHAFHLAICQASHNQVLVFTLQSLTDLMFNS VFASVNNLYHRPQQKKQIDRQHARIYNAVLQRLPHVAQRAARDHVRTVKKNLHDIELEGH HLIRSAVPLEMNLS >gi|299857060|gb|ADWS01000004.1| GENE 207 222093 - 223235 967 380 aa, chain - ## HITS:1 COG:no KEGG:c3711 NR:ns ## KEGG: c3711 # Name: yghO # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 380 23 402 402 798 99.0 0 MECDLLMIKIEKVINKNDLKAFIAFPSSLYPDDPNWIPPLFIERNEHLSAKNPGTDHIIW QAWVAKKAGQIVGRITAQIDTLHRERYGEDTGHFGMIDAIDDPQVFAALFGAAEAWLKSQ GASKISGPFSLNINQESGLLIEGFDTPPCAMMPHGKPWYAAHIEQLGYHKGIDLLAWWMQ RTDLTFSPALKKLMDQVRKKVTIRCINRQRFAEEMQILREIFNSGWQHNWGFVPFTEHEF ATMGDQLKYLVPDDMIYIAEIDSAPCAFIVGLPNINEAIADLNGSLFPFGWAKLLWRLKV SGVRTARVPLMGVRDEYQFSRIGPVIALLLIEALRDPFARRKIDALEMSWILETNTGMNN MLERIGAEPYKRYRLYEKQI >gi|299857060|gb|ADWS01000004.1| GENE 208 223639 - 225327 1194 562 aa, chain + ## HITS:1 COG:CC1165 KEGG:ns NR:ns ## COG: CC1165 COG0318 # Protein_GI_number: 16125417 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Caulobacter vibrioides # 1 547 11 560 567 446 43.0 1e-125 MRYADFPTLVDALDYAALSSAGMNFYDRRCQLEDQLEYQTLKTRAEAGAKRLLSLNLKKG ERVALIAETSSGFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIIT GDEWLPLVNAATHNNPELHVLSHAWFKALPEADVALQRPVPNDIAYLQYTSGSTRFPRGV IITHREVMANLRAISHDGIKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQD FAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEPISAE QLHQFAECFRQVNFDDKTFMPCYGLAENALAVSFSDEGSGVVVNEVDRDILEYQGKAVAP GAETRAVSTFVNCGKALPEHGIEIRNEAGMPVAERVVGHICISGPSLMSGYFGDQASQDE IAATGWLDTGDLGYLLDGYLYVTGRIKDLIIIRGRNIWPQDIEYIAEQEPEIHSGDAIAF VTAQEKIILQIQCRISDEERRGQLIHALAARIQSEFGVTAAIDLLPPHSIPRTSSGKPAR AEAKKRYQKAYAASLHVQESLA >gi|299857060|gb|ADWS01000004.1| GENE 209 225324 - 226238 726 304 aa, chain + ## HITS:1 COG:CC1164 KEGG:ns NR:ns ## COG: CC1164 COG0702 # Protein_GI_number: 16125416 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Caulobacter vibrioides # 5 287 9 288 317 120 33.0 4e-27 MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNLTWVRGSLEDTHSLSKL VAGASAVVHCAGQVRGHKEEIFTRCNVDGSLRLMQAAKESGFCQRFLFISSLAARHPELS WYANSKHVAEQRLTAMADEITLGVFRPTAVYGPGDKELKPLFDWMLRGLLPRLGAPDTQL SFLHVTDFAQAVGQWLSAETVQTQTYELCDGVPGGYDWQHVRQLAADARCGSVRMVGIPL PVLTCLADISTALSRLAGKEPMLTRSKIRELTHADWSASNNRISEDINWFPGISLEQALR NGLF >gi|299857060|gb|ADWS01000004.1| GENE 210 226270 - 226518 252 82 aa, chain + ## HITS:1 COG:no KEGG:S3224 NR:ns ## KEGG: S3224 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 82 1 82 82 124 100.0 1e-27 MVNREIVMDYILSCLQDLVENGVEIKPDSDLVNDLGLESIKVMDLLMMLEDRFDISIPIN ILLDVKTPAQLMETLLPWLENK >gi|299857060|gb|ADWS01000004.1| GENE 211 226518 - 227690 1278 390 aa, chain + ## HITS:1 COG:CC1162 KEGG:ns NR:ns ## COG: CC1162 COG0156 # Protein_GI_number: 16125414 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Caulobacter vibrioides # 1 388 1 389 404 401 53.0 1e-112 MGLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKKVILAGTNNYLGLTFNH DAISEGQAALAAQGTGTTGSRMANGSYAPHLALEKEIAEFFKRPTAIVFSTGYTANLGVI SALADHNAVVLLDADSHASIYDACSLGGAEIIRFRHNDAKDLERRMVRLGERAKEAIIIV EGIYSMLGDVAPLAEIVDIKRRLGGYLIVDEAHSFGVLGATGRGLAEAVGVEDDVDIIVG TFSKSLASIGGFAVGSEAMEVLRYGSRPYIFTASPSPSCIATVRSSLRTIATQPELRQKL MDNANHLYDGLQKLGYELSSHISPVVPVIIGSKEEGLRIWRELISLGVYVNLILPPAAPA GITLLRCSVNAAHSREQIDAIIQAFATLKQ >gi|299857060|gb|ADWS01000004.1| GENE 212 227725 - 228804 902 359 aa, chain - ## HITS:1 COG:VC2499 KEGG:ns NR:ns ## COG: VC2499 COG0795 # Protein_GI_number: 15642495 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Vibrio cholerae # 33 352 34 352 356 142 29.0 1e-33 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT LVELSPFIALLGGIVGLGQLSKNSELTAIRSMGFSIFRIALVALVAGILWTVSLGAIDEW VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD DLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLEILDNLAWQSTFTSMNLEELSM PGNSFSVRQLNHYINYLQETGQPSSEYRLALWEKLGHPILTLAMILLAVPFTFSAPRSPG MGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVAALGLPMAFVLAALILVYLFDRQH >gi|299857060|gb|ADWS01000004.1| GENE 213 228801 - 229871 1019 356 aa, chain - ## HITS:1 COG:PA3828 KEGG:ns NR:ns ## COG: PA3828 COG0795 # Protein_GI_number: 15599023 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 3 343 2 351 372 120 28.0 6e-27 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA LEMLLLVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY GRPWAYAQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP NVKRKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPRQGRFSTLLPL TLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVARDFSLLQKFSR >gi|299857060|gb|ADWS01000004.1| GENE 214 229902 - 230462 472 186 aa, chain - ## HITS:1 COG:ytfJ KEGG:ns NR:ns ## COG: ytfJ COG3054 # Protein_GI_number: 16132038 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Escherichia coli K12 # 1 184 1 183 184 203 54.0 1e-52 MSSRLIIALIIMLLAPGVQAHNFVTGKTVTPVYIQEGGELLLNSDDEIHYQKWKSTQLAG KVRIIQYIAGRKSAKKKNSLLIKAVEAANFPQDRFQPTTIVNTDDAIFGTGYFVVGKIEK NKRRYPWAQFIIDGNGQGRVAWRLPEQSSTILVLNKAGQIQWAKDGSLTPEEVDHVIALA QKLINE >gi|299857060|gb|ADWS01000004.1| GENE 215 230474 - 231298 569 274 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A3162 NR:ns ## KEGG: EcHS_A3162 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 274 1 274 274 533 99.0 1e-150 MMRKYFPLEASERLFVAIEEDDVVDAQVSLPPTIALSCTTEIIHDNYALCLQFWLNGVDR QELLRLVRKQAKGDELTADERKQFKYMRARYKHLRFAQRLYLKKHQAGFLFGKTTVFLGR FQDGFRNGKKNIVSYYGNLLRIYLSSPVWSLVNYSLRHSQLESVSGFIAYRQKQMHTLKE IIAKPRLTGREFHDVRKIISQQVSYYDTLRSLDPENKEALQISRFLAAINGLMGDKHDDM VADDMENRQSYDAPLALDSDIRQRLELLISRFPL >gi|299857060|gb|ADWS01000004.1| GENE 216 231298 - 232647 896 449 aa, chain - ## HITS:1 COG:yghQ KEGG:ns NR:ns ## COG: yghQ COG2244 # Protein_GI_number: 16130883 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 42 355 12 325 325 588 99.0 1e-168 MAGFNIKHWFADGAFRTIIRNSAWLGSSNVVSALLGLLALSCAGKGMTPAMFGVLVIVQS YAKSISDFIKFQTWQLVVQYGTPALTNNNPQQFRNVVSFSFSLDIVSGAVAIVGGIALLP FLSHSLGLDDQSFWLAALYCTLIPSMASSTPTGILRAVDRFDLIAVQQATKPFLRAAGSV VAWYFDFGFAGFVIAWYVSNLVGGTMYWWFAARELRRRNIHNAFKLNLFESARHIKGAWS FVWSTNIAHSIWSARNSCSTVLVGIVLGPAAAGLFKIAMTFFDAAGTPAGLLGKSFYPEV MRLDPRTTRPWLLGVKSGLLAGGIGILVALAVFIVGKPLISLVFGVKYLEAYDLIQVMLG AIVISMLGFPQESLLLMAGKQRAFLVAQTIASIGYIVLLFMFCHLFGVLGAAFACFGGQC LDVALSLIPTLKAFFQRHSLLYNAAGEKS >gi|299857060|gb|ADWS01000004.1| GENE 217 232693 - 233451 641 252 aa, chain - ## HITS:1 COG:no KEGG:B21_02809 NR:ns ## KEGG: B21_02809 # Name: yghR # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 252 1 252 252 486 100.0 1e-136 MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLS GEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQR LAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMFLAQRERRLYQQMAQYRPELI IRLGIDIETAISRKPDHDYAELQDKIGVMSKIGYNGTKILEIDSRAPYSEVLEQAQKAVS LVAIVSDRRSLT >gi|299857060|gb|ADWS01000004.1| GENE 218 233483 - 234181 309 232 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3669 NR:ns ## KEGG: ECO103_3669 # Name: yghS # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 232 1 232 232 473 100.0 1e-132 MSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPV IGAPCGRYLRSKAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKSQQGFLLITDR YPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFA RKPDHQLAALQEKIAVTPQLTFNGAKILELDGRHPADEILQASLRAIHAALS >gi|299857060|gb|ADWS01000004.1| GENE 219 234370 - 234606 184 78 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_3470 NR:ns ## KEGG: ECUMN_3470 # Name: yghT # Def: conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain # Organism: E.coli_UMN026 # Pathway: not_defined # 1 78 1 78 230 152 98.0 4e-36 MQSITPPLIAVIGSDGSGKSTMCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGK SLHKTIERNQVKTAKKLP >gi|299857060|gb|ADWS01000004.1| GENE 220 234667 - 235062 354 131 aa, chain + ## HITS:1 COG:no KEGG:SSON_3130 NR:ns ## KEGG: SSON_3130 # Name: yghT # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 131 94 224 224 277 98.0 1e-73 MLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNIEGGRFVSWLASQERKAFHWMASHKPD LVIKLNVDLEVACARKPDHKRESLARKIAITPQLTFGGAQLVDIDANRPLEQVLVDAEKA ITDFMTARGYH >gi|299857060|gb|ADWS01000004.1| GENE 221 235111 - 236610 1424 499 aa, chain - ## HITS:1 COG:pitB KEGG:ns NR:ns ## COG: pitB COG0306 # Protein_GI_number: 16130887 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Escherichia coli K12 # 1 499 1 499 499 891 99.0 0 MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMQPQLAVVMAAFF NFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLLAAIIWNLGTWFFGLPASS SHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLIVSPIVGLVIAGGLIFLLRRY WSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSAAGVAFSHGANDGQKGIGLVMLV LVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQHPELPQKLIAMEPPLPAASTDGTQ VTEFHCHPANTFDAIARVKTMLPGNMESYEPLSVSQRSQLRRIMLCISDTSAKLAKLPGV SKEDQNLLKKLRSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVAMTIGEKIGKRGMTY AQGMAAQMTAAVSIGLASYIGMPVSTTHVLSSAVAGTMVVDGGGLQRKTVTSILMAWVFT LPAAIFLSGGLYWIALQLI >gi|299857060|gb|ADWS01000004.1| GENE 222 236547 - 236810 109 87 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_3273 NR:ns ## KEGG: EcSMS35_3273 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 42 87 1 46 46 75 93.0 8e-13 MPEQAITKALCIYQGQQINLAYIRLRHFEFTNGRIISDFNGMGKVKYHFLTIKRVLFLVY QTISIHSKPLEIIKTQVFHWLIYSHMK >gi|299857060|gb|ADWS01000004.1| GENE 223 236902 - 238761 2192 619 aa, chain - ## HITS:1 COG:gsp_2 KEGG:ns NR:ns ## COG: gsp_2 COG0754 # Protein_GI_number: 16130888 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Escherichia coli K12 # 233 619 1 387 387 825 100.0 0 MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVFRSYIDDEYMGHKWQCV EFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQAFPNGSPRAPVAGALLIW DKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQWTRELEMVVENGCYTLKDTF DDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLENKGQFDGKWLDEKDPLQNAYVQA NGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPR LRLSWQRRRHHMITGRMDFCMDERGLKVYEYNADSASCHTEAGLILERWAEQGYKGNGFN PAEGLINELAGAWKHSRARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILRGLDELG WDAAGQLIDGEGRLVNCVWKTWAWETAFDQIREVSDREFAAVPIRTGHPQNEVRLIDVLL RPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCG SNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGD ESLVIKKESDIEPLIVVKK >gi|299857060|gb|ADWS01000004.1| GENE 224 238966 - 239832 964 288 aa, chain + ## HITS:1 COG:ECs3874 KEGG:ns NR:ns ## COG: ECs3874 COG0625 # Protein_GI_number: 15833128 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 288 17 304 304 602 100.0 1e-172 MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHPLQLYSLGTPNGQKVTI MLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHNPPIRVFESGS ILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFT MEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGNVVLGGVYDAAEFLDAGSYKHVQ RWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDASDFETNTEDKRQG Prediction of potential genes in microbial genomes Time: Sun May 15 21:50:56 2011 Seq name: gi|299857059|gb|ADWS01000005.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont4.1, whole genome shotgun sequence Length of sequence - 235858 bp Number of predicted genes - 232, with homology - 232 Number of transcription units - 142, operones - 55 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 1 - 486 99.0 # EU009180 [D:1..1542] # 16S ribosomal RNA # Shigella boydii # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella. - Term 885 - 925 6.2 1 1 Tu 1 . - CDS 930 - 3503 1845 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 3554 - 3613 4.7 2 2 Op 1 11/0.019 - CDS 3633 - 4364 435 ## COG1496 Uncharacterized conserved protein 3 2 Op 2 . - CDS 4361 - 5341 1058 ## COG0564 Pseudouridylate synthases, 23S RNA-specific - Prom 5396 - 5455 4.8 + Prom 5295 - 5354 4.5 4 3 Tu 1 . + CDS 5476 - 6213 773 ## COG4105 DNA uptake lipoprotein + Term 6223 - 6276 3.3 + Prom 6247 - 6306 5.5 5 4 Tu 1 . + CDS 6484 - 6825 574 ## PROTEIN SUPPORTED gi|15803120|ref|NP_289151.1| translation inhibitor protein RaiA + Term 6851 - 6878 1.5 + Prom 6851 - 6910 3.5 6 5 Tu 1 . + CDS 7075 - 8235 920 ## COG0077 Prephenate dehydratase - Term 8231 - 8270 10.0 7 6 Op 1 7/0.075 - CDS 8278 - 9399 1162 ## COG0287 Prephenate dehydrogenase 8 6 Op 2 . - CDS 9410 - 10480 1024 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 10591 - 10650 7.2 + Prom 10588 - 10647 3.0 9 7 Tu 1 . + CDS 10693 - 11055 251 ## B21_02455 hypothetical protein + Prom 11094 - 11153 4.1 10 8 Op 1 . + CDS 11205 - 11723 179 ## ECH74115_3842 hypothetical protein 11 8 Op 2 6/0.113 + CDS 11716 - 12939 821 ## COG2199 FOG: GGDEF domain 12 8 Op 3 . + CDS 12955 - 13437 268 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Term 13447 - 13486 7.3 13 9 Op 1 33/0.000 - CDS 13514 - 13861 573 ## PROTEIN SUPPORTED gi|15803128|ref|NP_289159.1| 50S ribosomal protein L19 14 9 Op 2 30/0.000 - CDS 13903 - 14670 559 ## COG0336 tRNA-(guanine-N1)-methyltransferase 15 9 Op 3 12/0.019 - CDS 14701 - 15249 189 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 16 9 Op 4 23/0.000 - CDS 15268 - 15576 524 ## PROTEIN SUPPORTED gi|110806723|ref|YP_690243.1| 30S ribosomal protein S16 17 9 Op 5 . - CDS 15765 - 17126 1646 ## COG0541 Signal recognition particle GTPase - Prom 17183 - 17242 5.2 + Prom 17203 - 17262 3.9 18 10 Op 1 4/0.472 + CDS 17293 - 18084 661 ## COG4137 ABC-type uncharacterized transport system, permease component 19 10 Op 2 . + CDS 18150 - 19391 1228 ## COG4536 Putative Mg2+ and Co2+ transporter CorB + Term 19398 - 19438 2.4 - Term 19386 - 19423 9.4 20 11 Op 1 . - CDS 19446 - 20039 901 ## COG0576 Molecular chaperone GrpE (heat shock protein) 21 11 Op 2 . - CDS 20036 - 20230 158 ## UTI89_C2948 hypothetical protein - Prom 20414 - 20473 2.6 + Prom 19981 - 20040 4.2 22 12 Op 1 17/0.000 + CDS 20162 - 21040 735 ## COG0061 Predicted sugar kinase + Prom 21042 - 21101 4.7 23 12 Op 2 5/0.226 + CDS 21126 - 22787 1461 ## COG0497 ATPase involved in DNA repair + Prom 22824 - 22883 3.2 24 13 Tu 1 . + CDS 22936 - 23277 348 ## COG2913 Small protein A (tmRNA-binding) + Term 23300 - 23346 8.2 - Term 23288 - 23332 7.8 25 14 Op 1 9/0.057 - CDS 23339 - 23629 308 ## COG2914 Uncharacterized protein conserved in bacteria 26 14 Op 2 . - CDS 23619 - 24056 393 ## COG2867 Oligoketide cyclase/lipid transport protein - Prom 24079 - 24138 5.7 + Prom 24043 - 24102 5.3 27 15 Tu 1 . + CDS 24227 - 24709 450 ## COG0691 tmRNA-binding protein + Prom 25327 - 25386 2.2 28 16 Op 1 . + CDS 25563 - 26681 377 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 29 16 Op 2 . + CDS 26720 - 27136 71 ## ECO103_3196 hypothetical protein - Term 27153 - 27196 7.1 30 17 Op 1 . - CDS 27208 - 28956 469 ## ECO111_3379 hypothetical protein 31 17 Op 2 . - CDS 28958 - 29392 129 ## ECO111_3380 putative histidine kinase-like protein - Prom 29577 - 29636 3.8 - Term 30634 - 30678 -0.2 32 18 Op 1 23/0.000 - CDS 30828 - 31694 249 ## COG2801 Transposase and inactivated derivatives 33 18 Op 2 . - CDS 31691 - 31990 280 ## COG2963 Transposase and inactivated derivatives - Prom 32135 - 32194 3.6 - Term 32143 - 32184 0.6 34 19 Op 1 . - CDS 32235 - 32666 173 ## gi|293413858|ref|ZP_06656507.1| predicted protein 35 19 Op 2 5/0.226 - CDS 32678 - 37519 3115 ## COG3209 Rhs family protein 36 19 Op 3 5/0.226 - CDS 37539 - 38000 338 ## COG5435 Uncharacterized conserved protein 37 19 Op 4 . - CDS 38028 - 39929 1345 ## COG3501 Uncharacterized protein conserved in bacteria 38 20 Op 1 . - CDS 40749 - 40961 88 ## ECO103_1586 hypothetical protein 39 20 Op 2 . - CDS 41037 - 41654 464 ## COG0625 Glutathione S-transferase - Prom 41674 - 41733 4.0 + Prom 41692 - 41751 4.7 40 21 Tu 1 . + CDS 41920 - 43419 1385 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 43428 - 43462 6.8 - Term 43416 - 43450 6.8 41 22 Tu 1 . - CDS 43534 - 44595 1219 ## COG3391 Uncharacterized conserved protein - Prom 44790 - 44849 4.8 + Prom 44749 - 44808 3.8 42 23 Tu 1 . + CDS 44837 - 46939 1529 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 46946 - 46985 5.1 - Term 46855 - 46892 0.3 43 24 Tu 1 . - CDS 46975 - 47640 514 ## COG1802 Transcriptional regulators - Prom 47777 - 47836 5.2 - Term 47699 - 47733 -0.4 44 25 Tu 1 . - CDS 47838 - 48875 983 ## COG2130 Putative NADP-dependent oxidoreductases - Prom 49030 - 49089 2.9 + Prom 48966 - 49025 2.3 45 26 Op 1 4/0.472 + CDS 49056 - 49574 501 ## COG1247 Sortase and related acyltransferases 46 26 Op 2 . + CDS 49571 - 50020 372 ## COG3238 Uncharacterized protein conserved in bacteria 47 27 Op 1 . - CDS 50021 - 50254 369 ## G2583_1807 hypothetical protein - Prom 50274 - 50333 1.7 48 27 Op 2 . - CDS 50340 - 50561 136 ## ECIAI1_1442 conserved hypothetical protein; putative inner membrane protein - Prom 50665 - 50724 3.1 49 28 Op 1 5/0.226 - CDS 50900 - 52324 1418 ## COG1012 NAD-dependent aldehyde dehydrogenases 50 28 Op 2 36/0.000 - CDS 52346 - 53140 694 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 51 28 Op 3 30/0.000 - CDS 53130 - 54071 1010 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 52 28 Op 4 13/0.019 - CDS 54072 - 55085 891 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 53 28 Op 5 3/0.698 - CDS 55103 - 56248 1227 ## COG0687 Spermidine/putrescine-binding periplasmic protein - Prom 56390 - 56449 3.4 54 29 Op 1 . - CDS 56493 - 57104 452 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 55 29 Op 2 2/0.849 - CDS 57077 - 57898 605 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 56 29 Op 3 . - CDS 57977 - 58414 402 ## COG1598 Uncharacterized conserved protein + Prom 58638 - 58697 4.2 57 30 Tu 1 . + CDS 58897 - 59067 175 ## JW1432 hypothetical protein 58 31 Op 1 3/0.698 - CDS 59159 - 61120 1681 ## COG0826 Collagenase and related proteases - Term 61132 - 61162 1.1 59 31 Op 2 . - CDS 61193 - 61729 341 ## COG1396 Predicted transcriptional regulators 60 32 Tu 1 . + CDS 61821 - 62996 866 ## COG3135 Uncharacterized protein involved in benzoate metabolism + Term 63035 - 63065 1.6 61 33 Tu 1 . - CDS 63036 - 64184 188 ## PROTEIN SUPPORTED gi|163764777|ref|ZP_02171831.1| ribosomal protein L22 - Prom 64245 - 64304 4.8 62 34 Op 1 . - CDS 64699 - 64887 251 ## ECO103_1985 hypothetical protein 63 34 Op 2 4/0.472 - CDS 64891 - 65250 369 ## COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance - Prom 65348 - 65407 5.4 64 35 Tu 1 . - CDS 65421 - 66059 553 ## COG1280 Putative threonine efflux protein - Prom 66100 - 66159 3.5 65 36 Tu 1 . - CDS 66186 - 67109 817 ## COG0583 Transcriptional regulator - Prom 67150 - 67209 3.8 + Prom 67118 - 67177 3.0 66 37 Tu 1 . + CDS 67212 - 68297 1039 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Term 68316 - 68350 6.0 + Prom 68393 - 68452 8.1 67 38 Op 1 3/0.698 + CDS 68548 - 70158 1625 ## COG1292 Choline-glycine betaine transporter 68 38 Op 2 11/0.019 + CDS 70190 - 71314 1172 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit + Term 71318 - 71360 5.5 69 38 Op 3 . + CDS 71370 - 72335 620 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Term 72340 - 72396 13.2 70 39 Op 1 8/0.057 - CDS 72389 - 73504 986 ## COG0349 Ribonuclease D - Term 73535 - 73567 3.0 71 39 Op 2 7/0.075 - CDS 73586 - 75337 1523 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 75357 - 75416 3.1 - Term 75422 - 75450 0.6 72 40 Op 1 7/0.075 - CDS 75476 - 76057 595 ## COG3065 Starvation-inducible outer membrane lipoprotein 73 40 Op 2 8/0.057 - CDS 76097 - 76792 706 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 74 40 Op 3 . - CDS 76850 - 78760 1581 ## COG1199 Rad3-related DNA helicases - Prom 78865 - 78924 2.9 75 41 Tu 1 . + CDS 78892 - 79236 509 ## COG0251 Putative translation initiation inhibitor, yjgF family 76 42 Tu 1 . + CDS 79658 - 79957 237 ## EC55989_1983 hypothetical protein + Term 79987 - 80030 5.2 - Term 79894 - 79935 2.2 77 43 Tu 1 . - CDS 80077 - 80256 325 ## COG3140 Uncharacterized protein conserved in bacteria - Prom 80279 - 80338 4.7 78 44 Op 1 6/0.113 + CDS 80330 - 81691 1068 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 79 44 Op 2 5/0.226 + CDS 81695 - 82273 377 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 82305 - 82364 5.2 80 45 Tu 1 . + CDS 82457 - 83821 1518 ## COG1760 L-serine deaminase + Term 83832 - 83869 8.2 + Prom 83836 - 83895 1.9 81 46 Tu 1 . + CDS 83952 - 85550 1119 ## COG2200 FOG: EAL domain 82 47 Tu 1 . - CDS 85554 - 87110 1815 ## COG1253 Hemolysins and related proteins containing CBS domains + Prom 87379 - 87438 4.5 83 48 Op 1 13/0.019 + CDS 87573 - 88544 1142 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 84 48 Op 2 13/0.019 + CDS 88607 - 89407 989 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 85 48 Op 3 4/0.472 + CDS 89420 - 90271 1053 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 90288 - 90317 3.5 86 49 Tu 1 4/0.472 + CDS 90326 - 90784 303 ## COG4811 Predicted membrane protein + Term 90978 - 91018 0.8 87 50 Tu 1 . + CDS 91213 - 91779 618 ## COG1971 Predicted membrane protein + Term 91815 - 91856 2.1 - Term 91489 - 91527 4.4 88 51 Tu 1 . - CDS 91776 - 92501 539 ## COG0500 SAM-dependent methyltransferases - Prom 92684 - 92743 3.7 - Term 92672 - 92702 1.0 89 52 Tu 1 . - CDS 92751 - 92960 362 ## COG1278 Cold shock proteins - Prom 93032 - 93091 2.6 - Term 93728 - 93771 6.1 90 53 Tu 1 . - CDS 93785 - 94072 237 ## ECS88_1877 hypothetical protein - Prom 94092 - 94151 6.0 + Prom 94366 - 94425 5.2 91 54 Tu 1 . + CDS 94449 - 94688 255 ## ECO103_2017 hypothetical protein + Term 94791 - 94833 2.3 - Term 94777 - 94821 3.1 92 55 Tu 1 . - CDS 94831 - 95622 898 ## COG1414 Transcriptional regulator - Prom 95661 - 95720 6.3 + Prom 95620 - 95679 8.3 93 56 Tu 1 . + CDS 95799 - 97172 982 ## COG0477 Permeases of the major facilitator superfamily + Term 97178 - 97209 0.0 - Term 97165 - 97197 1.0 94 57 Tu 1 . - CDS 97218 - 98099 838 ## COG0501 Zn-dependent protease with chaperone function - Prom 98203 - 98262 4.4 - Term 98248 - 98283 5.1 95 58 Op 1 7/0.075 - CDS 98291 - 100339 2144 ## COG0793 Periplasmic protease 96 58 Op 2 4/0.472 - CDS 100359 - 101057 575 ## COG3109 Activator of osmoprotectant transporter ProP - Term 101093 - 101127 3.1 97 58 Op 3 . - CDS 101154 - 101651 303 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 - Prom 101718 - 101777 3.8 + Prom 101647 - 101706 4.8 98 59 Op 1 11/0.019 + CDS 101886 - 103064 872 ## COG2995 Uncharacterized paraquat-inducible protein A 99 59 Op 2 4/0.472 + CDS 103027 - 105666 2501 ## COG3008 Paraquat-inducible protein B + Term 105675 - 105710 7.2 100 60 Tu 1 . + CDS 105746 - 107185 1210 ## COG0144 tRNA and rRNA cytosine-C5-methylases + Prom 107190 - 107249 4.4 101 61 Op 1 . + CDS 107303 - 107539 209 ## ECSP_2410 hypothetical protein 102 61 Op 2 . + CDS 107560 - 107835 132 ## SbBS512_E2105 hypothetical protein 103 62 Tu 1 . - CDS 107836 - 108492 500 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - Term 108802 - 108859 4.4 104 63 Op 1 . - CDS 108888 - 109229 319 ## ECO111_2347 hypothetical protein 105 63 Op 2 8/0.057 - CDS 109242 - 110114 720 ## COG1276 Putative copper export protein 106 63 Op 3 . - CDS 110118 - 110492 342 ## COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC - Prom 110521 - 110580 4.0 + Prom 110550 - 110609 2.1 107 64 Tu 1 . + CDS 110631 - 110861 317 ## ECP_1786 DNA polymerase III subunit theta (EC:2.7.7.7) + Prom 110864 - 110923 3.7 108 65 Op 1 4/0.472 + CDS 110963 - 111619 393 ## COG0388 Predicted amidohydrolase 109 65 Op 2 . + CDS 111643 - 112305 731 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 110 66 Tu 1 . - CDS 112302 - 114362 1896 ## COG1770 Protease II - Prom 114388 - 114447 4.3 111 67 Tu 1 . - CDS 114571 - 115230 780 ## COG2979 Uncharacterized protein conserved in bacteria - Prom 115387 - 115446 2.8 + Prom 115314 - 115373 3.2 112 68 Tu 1 . + CDS 115437 - 115643 68 ## gi|188494878|ref|ZP_03002148.1| hypothetical protein Ec53638_0054 113 69 Op 1 . - CDS 115557 - 115913 215 ## ECIAI39_1203 hypothetical protein 114 69 Op 2 . - CDS 115980 - 116270 370 ## COG3141 Uncharacterized protein conserved in bacteria - Prom 116297 - 116356 5.0 + Prom 116252 - 116311 4.7 115 70 Tu 1 . + CDS 116404 - 117582 1370 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) + Term 117602 - 117645 9.1 - Term 117597 - 117627 4.3 116 71 Op 1 8/0.057 - CDS 117638 - 118279 897 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 117 71 Op 2 4/0.472 - CDS 118316 - 120127 1590 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase - Prom 120235 - 120294 6.6 - Term 120245 - 120282 5.1 118 72 Tu 1 . - CDS 120362 - 121837 1693 ## COG0364 Glucose-6-phosphate 1-dehydrogenase - Prom 122010 - 122069 7.8 119 73 Tu 1 . + CDS 122175 - 123044 617 ## COG1737 Transcriptional regulators + Term 123063 - 123103 1.4 120 74 Tu 1 . + CDS 123172 - 124614 1310 ## COG0469 Pyruvate kinase + Term 124718 - 124756 5.3 - Term 124603 - 124655 10.7 121 75 Tu 1 1/0.943 - CDS 124745 - 125716 780 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 125751 - 125810 6.4 - Term 125785 - 125819 3.5 122 76 Op 1 . - CDS 125836 - 127095 1239 ## COG0739 Membrane proteins related to metalloendopeptidases 123 76 Op 2 . - CDS 127174 - 128121 468 ## COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin - Prom 128142 - 128201 6.1 + Prom 128054 - 128113 6.5 124 77 Op 1 42/0.000 + CDS 128185 - 128940 219 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 125 77 Op 2 . + CDS 128937 - 129722 900 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components - Term 129802 - 129850 3.7 126 78 Op 1 29/0.000 - CDS 129869 - 130879 1048 ## COG2255 Holliday junction resolvasome, helicase subunit 127 78 Op 2 . - CDS 130888 - 131499 619 ## COG0632 Holliday junction resolvasome, DNA-binding subunit - Prom 131530 - 131589 7.4 + Prom 131683 - 131742 7.2 128 79 Tu 1 . + CDS 131774 - 132376 281 ## ECO111_2384 hypothetical protein + Term 132512 - 132553 2.3 - Term 132333 - 132370 5.2 129 80 Op 1 8/0.057 - CDS 132378 - 132899 525 ## COG0817 Holliday junction resolvasome, endonuclease subunit 130 80 Op 2 7/0.075 - CDS 132934 - 133674 999 ## COG0217 Uncharacterized conserved protein 131 80 Op 3 5/0.226 - CDS 133703 - 134212 369 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 132 80 Op 4 . - CDS 134273 - 136045 2212 ## COG0173 Aspartyl-tRNA synthetase - Prom 136140 - 136199 4.6 + Prom 136269 - 136328 6.5 133 81 Op 1 1/0.943 + CDS 136355 - 136921 506 ## COG1335 Amidases related to nicotinamidase 134 81 Op 2 2/0.849 + CDS 136918 - 137736 387 ## COG1801 Uncharacterized conserved protein 135 81 Op 3 2/0.849 + CDS 137789 - 138184 454 ## COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily 136 81 Op 4 17/0.000 + CDS 138225 - 138968 832 ## COG0500 SAM-dependent methyltransferases 137 81 Op 5 . + CDS 138965 - 139936 939 ## COG0500 SAM-dependent methyltransferases + Term 139990 - 140029 0.1 138 82 Op 1 . - CDS 140130 - 141110 797 ## COG3547 Transposase and inactivated derivatives 139 82 Op 2 . - CDS 141174 - 141374 109 ## ECIAI1_0834 hypothetical protein 140 82 Op 3 . - CDS 141381 - 142745 1434 ## COG0513 Superfamily II DNA and RNA helicases - Prom 142774 - 142833 2.1 - Term 143055 - 143095 7.0 141 83 Op 1 22/0.000 - CDS 143120 - 143386 469 ## COG0851 Septum formation topological specificity factor 142 83 Op 2 22/0.000 - CDS 143390 - 144202 797 ## COG2894 Septum formation inhibitor-activating ATPase 143 83 Op 3 . - CDS 144226 - 144921 373 ## COG0850 Septum formation inhibitor - Prom 145069 - 145128 4.5 + Prom 145164 - 145223 4.6 144 84 Tu 1 . + CDS 145447 - 145809 109 ## ECO103_1278 hypothetical protein + Term 145897 - 145937 2.1 145 85 Tu 1 . - CDS 145929 - 146330 330 ## ECBD_2444 peptidase domain protein - Prom 146364 - 146423 4.6 + Prom 146321 - 146380 6.6 146 86 Op 1 2/0.849 + CDS 146572 - 146865 311 ## COG3100 Uncharacterized protein conserved in bacteria 147 86 Op 2 1/0.943 + CDS 146937 - 147596 647 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) + Prom 147605 - 147664 3.9 148 86 Op 3 . + CDS 147688 - 148134 473 ## COG2983 Uncharacterized conserved protein 149 87 Tu 1 . - CDS 148341 - 148601 178 ## JW5181 hemolysin E - Prom 148626 - 148685 2.3 - Term 148676 - 148705 0.3 150 88 Tu 1 . - CDS 148742 - 149251 416 ## ECSE_1230 hemolysin E - Prom 149271 - 149330 4.8 151 89 Op 1 4/0.472 + CDS 149624 - 150043 296 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 152 89 Op 2 . + CDS 150043 - 151311 500 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Term 151318 - 151348 3.0 153 90 Tu 1 . - CDS 151357 - 151887 629 ## COG1495 Disulfide bond formation protein DsbB - Prom 151967 - 152026 4.2 - Term 151991 - 152022 4.1 154 91 Tu 1 . - CDS 152033 - 153574 1660 ## COG3067 Na+/H+ antiporter - Prom 153622 - 153681 5.5 + Prom 153703 - 153762 5.3 155 92 Tu 1 . + CDS 153795 - 154448 704 ## COG2186 Transcriptional regulators + Term 154533 - 154569 2.3 - Term 154525 - 154553 1.0 156 93 Tu 1 . - CDS 154567 - 156099 1482 ## COG2719 Uncharacterized conserved protein - Prom 156344 - 156403 4.4 + Prom 156324 - 156383 5.8 157 94 Op 1 7/0.075 + CDS 156429 - 157727 1303 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 158 94 Op 2 . + CDS 157737 - 158807 902 ## COG0787 Alanine racemase 159 95 Tu 1 . + CDS 158910 - 159059 70 ## gi|188493462|ref|ZP_03000732.1| hypothetical protein Ec53638_4549 160 96 Op 1 1/0.943 - CDS 159193 - 160929 1686 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain - Prom 160951 - 161010 1.7 - Term 160956 - 160989 -0.4 161 96 Op 2 . - CDS 161024 - 161938 746 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF - Prom 161966 - 162025 2.6 + Prom 161926 - 161985 1.7 162 97 Tu 1 . + CDS 162038 - 162649 548 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 162769 - 162812 1.7 163 98 Tu 1 . - CDS 162651 - 163385 576 ## COG5581 Predicted glycosyltransferase - Prom 163621 - 163680 2.3 + Prom 163412 - 163471 3.6 164 99 Tu 1 . + CDS 163586 - 163840 262 ## COG2261 Predicted membrane protein + Term 163853 - 163894 6.2 + Prom 163970 - 164029 4.7 165 100 Tu 1 . + CDS 164162 - 164458 148 ## B21_01181 hypothetical protein 166 101 Tu 1 . - CDS 164537 - 166234 1691 ## COG1626 Neutral trehalase - Prom 166321 - 166380 5.5 - Term 166504 - 166544 8.1 167 102 Op 1 2/0.849 - CDS 166554 - 167972 1218 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 168 102 Op 2 10/0.038 - CDS 167983 - 168615 593 ## COG2376 Dihydroxyacetone kinase 169 102 Op 3 . - CDS 168626 - 169696 1008 ## COG2376 Dihydroxyacetone kinase - Prom 169790 - 169849 4.9 + Prom 169832 - 169891 6.2 170 103 Tu 1 . + CDS 169924 - 171843 1441 ## COG3284 Transcriptional activator of acetoin/glycerol metabolism 171 104 Tu 1 . - CDS 171943 - 174828 1587 ## COG3468 Type V secretory pathway, adhesin AidA - Term 175579 - 175608 2.1 172 105 Tu 1 14/0.019 - CDS 175669 - 176760 1323 ## COG0012 Predicted GTPase, probable translation factor - Prom 176793 - 176852 2.4 - Term 176833 - 176865 0.7 173 106 Op 1 . - CDS 176877 - 177092 112 ## COG0193 Peptidyl-tRNA hydrolase 174 106 Op 2 . - CDS 177094 - 177462 273 ## COG0193 Peptidyl-tRNA hydrolase - Prom 177492 - 177551 4.2 + Prom 177628 - 177687 3.7 175 107 Tu 1 . + CDS 177740 - 178018 274 ## LF82_2742 uncharacterized protein YchH 176 108 Tu 1 . - CDS 178073 - 179725 1876 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Term 179825 - 179864 4.1 177 109 Op 1 13/0.019 - CDS 179877 - 180890 990 ## COG0462 Phosphoribosylpyrophosphate synthetase - Term 180929 - 180955 0.3 178 109 Op 2 13/0.019 - CDS 180975 - 181826 514 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 179 109 Op 3 . - CDS 181826 - 182449 562 ## COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis - Prom 182590 - 182649 6.0 + Prom 182565 - 182624 4.0 180 110 Op 1 9/0.057 + CDS 182663 - 183919 1331 ## COG0373 Glutamyl-tRNA reductase 181 110 Op 2 32/0.000 + CDS 183961 - 185043 1204 ## COG0216 Protein chain release factor A 182 110 Op 3 6/0.113 + CDS 185043 - 185876 476 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 183 110 Op 4 6/0.113 + CDS 185873 - 186265 377 ## COG3094 Uncharacterized protein conserved in bacteria 184 110 Op 5 8/0.057 + CDS 186269 - 187078 742 ## COG2912 Uncharacterized conserved protein 185 110 Op 6 . + CDS 187114 - 187968 1079 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase + Term 187990 - 188026 4.1 - Term 188029 - 188066 6.0 186 111 Tu 1 . - CDS 188116 - 188250 120 ## SBO_1851 hypothetical protein - Prom 188408 - 188467 1.8 - Term 188565 - 188602 6.0 187 112 Tu 1 . - CDS 188652 - 188786 118 ## SBO_1851 hypothetical protein - Term 189106 - 189160 4.8 188 113 Tu 1 . - CDS 189164 - 190264 1092 ## COG0387 Ca2+/H+ antiporter - Prom 190311 - 190370 4.8 + Prom 190255 - 190314 5.0 189 114 Tu 1 . + CDS 190534 - 190764 289 ## COG4572 Putative cation transport regulator + Prom 190800 - 190859 2.9 190 115 Tu 1 . + CDS 190943 - 191494 406 ## COG3703 Uncharacterized protein involved in cation transport - Term 191613 - 191658 2.8 191 116 Tu 1 . - CDS 191661 - 192014 371 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction - Prom 192048 - 192107 2.7 + Prom 192116 - 192175 3.3 192 117 Tu 1 . + CDS 192241 - 193593 788 ## ECH74115_1703 hypothetical protein 193 118 Op 1 8/0.057 - CDS 193594 - 194244 860 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 194 118 Op 2 . - CDS 194237 - 196033 1349 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific - Prom 196193 - 196252 8.3 + Prom 195762 - 195821 3.1 195 119 Op 1 . + CDS 196059 - 196277 123 ## SSON_1954 hypothetical protein + Prom 196287 - 196346 1.8 196 119 Op 2 10/0.038 + CDS 196372 - 197763 1143 ## COG2223 Nitrate/nitrite transporter + Term 197787 - 197817 3.4 + Prom 197907 - 197966 5.8 197 120 Op 1 13/0.019 + CDS 198156 - 201899 4498 ## COG5013 Nitrate reductase alpha subunit 198 120 Op 2 12/0.019 + CDS 201896 - 203434 1840 ## COG1140 Nitrate reductase beta subunit 199 120 Op 3 12/0.019 + CDS 203431 - 204141 884 ## COG2180 Nitrate reductase delta subunit 200 120 Op 4 . + CDS 204141 - 204818 893 ## COG2181 Nitrate reductase gamma subunit + Term 204838 - 204869 1.6 - TRNA 205181 - 205265 66.9 # Tyr GTA 0 0 201 121 Tu 1 . + CDS 205299 - 205448 63 ## ECUMN_1528 hypothetical protein - TRNA 205300 - 205384 66.9 # Tyr GTA 0 0 202 122 Op 1 4/0.472 - CDS 205544 - 206386 895 ## COG0788 Formyltetrahydrofolate hydrolase 203 122 Op 2 . - CDS 206436 - 206894 200 ## PROTEIN SUPPORTED gi|90021194|ref|YP_527021.1| ribosomal protein L20 - Prom 206939 - 206998 3.8 + Prom 206698 - 206757 3.2 204 123 Op 1 4/0.472 + CDS 206968 - 207912 406 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily + Term 207956 - 207985 -0.3 205 123 Op 2 5/0.226 + CDS 208004 - 209017 571 ## COG0784 FOG: CheY-like receiver + Term 209061 - 209095 -0.4 + Prom 209023 - 209082 4.9 206 124 Tu 1 . + CDS 209219 - 210127 939 ## COG1210 UDP-glucose pyrophosphorylase + Term 210150 - 210191 8.8 - Term 210215 - 210243 3.0 207 125 Tu 1 . - CDS 210271 - 210684 524 ## COG2916 DNA-binding protein H-NS - Prom 210720 - 210779 4.5 + Prom 211196 - 211255 5.6 208 126 Tu 1 . + CDS 211289 - 211906 293 ## COG1435 Thymidine kinase + Term 211921 - 211969 8.1 209 127 Tu 1 . - CDS 212188 - 212598 87 ## EC55989_1334 hypothetical protein - Prom 212637 - 212696 1.8 210 128 Tu 1 . - CDS 212899 - 213084 123 ## ROD_08131 ISCro3 transposase - Prom 213119 - 213178 2.6 211 129 Tu 1 . - CDS 213208 - 215883 2825 ## COG1454 Alcohol dehydrogenase, class IV + Prom 216113 - 216172 6.9 212 130 Tu 1 . + CDS 216360 - 217007 490 ## COG2095 Multiple antibiotic transporter + Term 217020 - 217058 4.6 - Term 217012 - 217041 0.4 213 131 Tu 1 . - CDS 217165 - 217326 146 ## ECS88_1310 hypothetical protein - Prom 217399 - 217458 2.4 + Prom 217564 - 217623 3.0 214 132 Op 1 21/0.000 + CDS 217745 - 219376 1890 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 219380 - 219432 11.1 215 132 Op 2 49/0.000 + CDS 219462 - 220382 840 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 216 132 Op 3 44/0.000 + CDS 220397 - 221305 881 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 217 132 Op 4 44/0.000 + CDS 221317 - 222330 582 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 218 132 Op 5 . + CDS 222327 - 223331 851 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 223341 - 223372 4.1 - Term 223329 - 223360 4.1 219 133 Op 1 1/0.943 - CDS 223384 - 223713 448 ## COG3099 Uncharacterized protein conserved in bacteria 220 133 Op 2 . - CDS 223748 - 225208 1164 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 225236 - 225295 7.8 + Prom 225267 - 225326 6.2 221 134 Tu 1 . + CDS 225351 - 225524 73 ## EC55989_1347 hypothetical protein + Term 225528 - 225566 3.1 - Term 225514 - 225554 8.1 222 135 Tu 1 . - CDS 225579 - 226712 730 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component - Prom 226858 - 226917 4.8 - Term 227067 - 227123 5.1 223 136 Tu 1 . - CDS 227132 - 227428 291 ## COG2350 Uncharacterized protein conserved in bacteria - Prom 227461 - 227520 3.3 + Prom 227561 - 227620 5.6 224 137 Tu 1 . + CDS 227652 - 228371 550 ## COG0810 Periplasmic protein TonB, links inner and outer membranes + Term 228379 - 228420 11.3 - Term 228367 - 228408 11.3 225 138 Tu 1 . - CDS 228411 - 228809 357 ## COG1607 Acyl-CoA hydrolase - Prom 228838 - 228897 2.1 - Term 228871 - 228912 5.5 226 139 Op 1 . - CDS 228914 - 229453 534 ## COG2917 Intracellular septation protein A 227 139 Op 2 . - CDS 229483 - 230226 558 ## SSON_1911 hypothetical protein - Prom 230476 - 230535 7.0 + Prom 230495 - 230554 7.0 228 140 Tu 1 . + CDS 230667 - 231221 637 ## COG3047 Outer membrane protein W + Term 231260 - 231291 3.1 - Term 231225 - 231257 -0.8 229 141 Tu 1 . - CDS 231267 - 232397 471 ## COG0582 Integrase - Prom 232516 - 232575 1.8 230 142 Op 1 . - CDS 232688 - 235159 1451 ## ECED1_0996 putative exonuclease from phage origin 231 142 Op 2 . - CDS 235252 - 235443 171 ## ECO111_1046 hypothetical protein 232 142 Op 3 . - CDS 235440 - 235628 153 ## ECSP_2138 putative inhibitor of cell division encoded by cryptic prophage CP-933P - Prom 235786 - 235845 3.1 Predicted protein(s) >gi|299857059|gb|ADWS01000005.1| GENE 1 930 - 3503 1845 857 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 857 1 811 815 715 46 0.0 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP GKVIRLEVNEDRIVAVQ >gi|299857059|gb|ADWS01000005.1| GENE 2 3633 - 4364 435 243 aa, chain - ## HITS:1 COG:yfiH KEGG:ns NR:ns ## COG: yfiH COG1496 # Protein_GI_number: 16130514 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 243 1 243 243 501 98.0 1e-142 MSKLIVPQWPLPKGVAACSSSRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNL PSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEV AAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGVEVREAFMAVDAKAS AAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGRMASFI WLI >gi|299857059|gb|ADWS01000005.1| GENE 3 4361 - 5341 1058 326 aa, chain - ## HITS:1 COG:sfhB KEGG:ns NR:ns ## COG: sfhB COG0564 # Protein_GI_number: 16130515 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Escherichia coli K12 # 1 326 1 326 326 623 99.0 1e-178 MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL GGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNALL HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM AHITHPLVGDPVYGGRPRPPKGASEAFISMLRKFDRQALHATMLRLYHPISGIEMEWHAP IPQDMVELIEVMRADFEEHKDEVDWL >gi|299857059|gb|ADWS01000005.1| GENE 4 5476 - 6213 773 245 aa, chain + ## HITS:1 COG:ECs3458 KEGG:ns NR:ns ## COG: ECs3458 COG4105 # Protein_GI_number: 15832712 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 466 100.0 1e-131 MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDN RYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALD DSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYS VAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAA NSSNT >gi|299857059|gb|ADWS01000005.1| GENE 5 6484 - 6825 574 113 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803120|ref|NP_289151.1| translation inhibitor protein RaiA [Escherichia coli O157:H7 EDL933] # 1 113 1 113 113 225 100 1e-57 MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVADATINTPNGV LVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVKDANFVEEVEEE >gi|299857059|gb|ADWS01000005.1| GENE 6 7075 - 8235 920 386 aa, chain + ## HITS:1 COG:ECs3462_2 KEGG:ns NR:ns ## COG: ECs3462_2 COG0077 # Protein_GI_number: 15832716 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Escherichia coli O157:H7 # 105 386 1 282 282 565 99.0 1e-161 MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHRPVRDIDRERDLLERLI TLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPHSARIAFLGPKGSYSHLAA RQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIENTSSGAINDVYDLLQHTSLSI VGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSKFLNRYPHWKIEYTESTSAAMEK VAQAKSPHVAALGSEAGGTLYGLQVLERIEANQQQNFTRFVVLARKAINVSDQVPAKTTL LMATGQQAGALVEALLVLRNHNLIMTRLESRPIHGNPWEEMFYLDIQANLESAEMQKALK ELGEITRSMKVLGCYPSENVVPVDPT >gi|299857059|gb|ADWS01000005.1| GENE 7 8278 - 9399 1162 373 aa, chain - ## HITS:1 COG:ECs3463_2 KEGG:ns NR:ns ## COG: ECs3463_2 COG0287 # Protein_GI_number: 15832717 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Escherichia coli O157:H7 # 100 373 1 274 274 557 100.0 1e-158 MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAE AEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTL SGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIGKLPPLPKDCILVDLASVKNG PLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDP QLYADIIMSSERNLALIKRYYKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSE SRVLLRQANDNRQ >gi|299857059|gb|ADWS01000005.1| GENE 8 9410 - 10480 1024 356 aa, chain - ## HITS:1 COG:aroF KEGG:ns NR:ns ## COG: aroF COG0722 # Protein_GI_number: 16130522 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli K12 # 1 356 1 356 356 707 99.0 0 MQKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRRTISDIIAGRDPRLLVVCG PCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTTVGWKGLINDPHMDGSFDV EAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGL SMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQVALLQTQGNPDGHVILRGGKAP NYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDYRRQPAVAESVVAQIKDGNRSIIGL MIESNIHEGNQSSEQPRSEMKYGVSVTDACISWEMTDALLREIHQDLNGQLTARVA >gi|299857059|gb|ADWS01000005.1| GENE 9 10693 - 11055 251 120 aa, chain + ## HITS:1 COG:no KEGG:B21_02455 NR:ns ## KEGG: B21_02455 # Name: yfiL # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 120 2 121 121 238 100.0 5e-62 MKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRG LYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQLHEVWQKGADENASTIRLN >gi|299857059|gb|ADWS01000005.1| GENE 10 11205 - 11723 179 172 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_3842 NR:ns ## KEGG: ECH74115_3842 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 172 1 172 172 329 100.0 2e-89 MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSS RFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLI AEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG >gi|299857059|gb|ADWS01000005.1| GENE 11 11716 - 12939 821 407 aa, chain + ## HITS:1 COG:yfiN_2 KEGG:ns NR:ns ## COG: yfiN_2 COG2199 # Protein_GI_number: 16130525 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 240 407 1 168 168 333 100.0 3e-91 MDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMT YSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFIS HWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL HNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHAT GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL HNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR >gi|299857059|gb|ADWS01000005.1| GENE 12 12955 - 13437 268 160 aa, chain + ## HITS:1 COG:yfiB KEGG:ns NR:ns ## COG: yfiB COG2885 # Protein_GI_number: 16130526 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli K12 # 1 160 1 160 160 309 99.0 1e-84 MIKHLVAPLIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKND YKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGG QIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP >gi|299857059|gb|ADWS01000005.1| GENE 13 13514 - 13861 573 115 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803128|ref|NP_289159.1| 50S ribosomal protein L19 [Escherichia coli O157:H7 EDL933] # 1 115 1 115 115 225 100 1e-57 MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFT VRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN >gi|299857059|gb|ADWS01000005.1| GENE 14 13903 - 14670 559 255 aa, chain - ## HITS:1 COG:ECs3470 KEGG:ns NR:ns ## COG: ECs3470 COG0336 # Protein_GI_number: 15832724 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 488 100.0 1e-138 MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGM LMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDE RVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFAEGLLDCPH YTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEF KTEHAQQQHKHDGMA >gi|299857059|gb|ADWS01000005.1| GENE 15 14701 - 15249 189 182 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 11 177 2 160 179 77 29 5e-13 MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQL ESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTE GYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDP GF >gi|299857059|gb|ADWS01000005.1| GENE 16 15268 - 15576 524 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|110806723|ref|YP_690243.1| 30S ribosomal protein S16 [Shigella flexneri 5 str. 8401] # 1 102 1 102 102 206 100 7e-52 MTPDSVPRWGPVVLFTQEDVMVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFN PIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA >gi|299857059|gb|ADWS01000005.1| GENE 17 15765 - 17126 1646 453 aa, chain - ## HITS:1 COG:ECs3473 KEGG:ns NR:ns ## COG: ECs3473 COG0541 # Protein_GI_number: 15832727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 803 100.0 0 MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAV GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR >gi|299857059|gb|ADWS01000005.1| GENE 18 17293 - 18084 661 263 aa, chain + ## HITS:1 COG:ECs3474 KEGG:ns NR:ns ## COG: ECs3474 COG4137 # Protein_GI_number: 15832728 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 263 26 288 288 446 100.0 1e-125 MPVFALLALVAYSVSLALIVPGLLQKNGGWRRMAIISAVIALVCHAIALEARILPDGDSG QNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLALATFMPNEYITHLEA TPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFNQEMPPLMSIERKMFHIT QIGVVLLTLTLCTGLFYMHNLFSMENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWF NVAGAVILTLAYFGSRIVQQLIS >gi|299857059|gb|ADWS01000005.1| GENE 19 18150 - 19391 1228 413 aa, chain + ## HITS:1 COG:yfjDm KEGG:ns NR:ns ## COG: yfjDm COG4536 # Protein_GI_number: 16132248 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorB # Organism: Escherichia coli K12 # 5 413 12 420 420 770 99.0 0 MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNI LASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPL QILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLS VLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVR EAWRLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGL VTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDART VNGVILEALEEIPVAGTRVHIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE >gi|299857059|gb|ADWS01000005.1| GENE 20 19446 - 20039 901 197 aa, chain - ## HITS:1 COG:ECs3476 KEGG:ns NR:ns ## COG: ECs3476 COG0576 # Protein_GI_number: 15832730 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 315 100.0 3e-86 MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKIANLEAQLAEAQTRERD GILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKANPDMSAMV EGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTL NGRTIRAAMVTVAKAKA >gi|299857059|gb|ADWS01000005.1| GENE 21 20036 - 20230 158 64 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2948 NR:ns ## KEGG: UTI89_C2948 # Name: yfjC # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 64 20 83 83 116 98.0 2e-25 MCCQCSGVPWVSHNANTLEMIIHFSEVLVTKIDDNVSASLETLKLIPIISEVSEMNAKKT RRNS >gi|299857059|gb|ADWS01000005.1| GENE 22 20162 - 21040 735 292 aa, chain + ## HITS:1 COG:yfjB KEGG:ns NR:ns ## COG: yfjB COG0061 # Protein_GI_number: 16130534 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Escherichia coli K12 # 1 292 1 292 292 611 100.0 1e-175 MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIAHELQLKNVKTGTLAEI GQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLTDLDPDNAQQQLADVLEGH YISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMIEFEVYIDEIFAFSQRSDGLI ISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRNDL EISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF >gi|299857059|gb|ADWS01000005.1| GENE 23 21126 - 22787 1461 553 aa, chain + ## HITS:1 COG:recN KEGG:ns NR:ns ## COG: recN COG0497 # Protein_GI_number: 16130535 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli K12 # 1 553 1 553 553 1000 99.0 0 MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA RADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLREL GQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMTARYQLWHQSCRDLAHHQQLS QERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDA NLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFE LEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALEI ARALHQQRQQYAEELAQLITDSMHALSMPHGQFTIDVKFDEHHLGADGADRIEFRVTTNP GQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL GESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLNKKARLQELARLLGGSEVT RNTLANAKELLAA >gi|299857059|gb|ADWS01000005.1| GENE 24 22936 - 23277 348 113 aa, chain + ## HITS:1 COG:STM2685 KEGG:ns NR:ns ## COG: STM2685 COG2913 # Protein_GI_number: 16766000 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Salmonella typhimurium LT2 # 1 111 1 111 112 198 92.0 2e-51 MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVSKIRVGMTQQQVAYALG TPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN >gi|299857059|gb|ADWS01000005.1| GENE 25 23339 - 23629 308 96 aa, chain - ## HITS:1 COG:yfjF KEGG:ns NR:ns ## COG: yfjF COG2914 # Protein_GI_number: 16130537 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 96 7 102 102 163 98.0 7e-41 MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPA KLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK >gi|299857059|gb|ADWS01000005.1| GENE 26 23619 - 24056 393 145 aa, chain - ## HITS:1 COG:ECs3481 KEGG:ns NR:ns ## COG: ECs3481 COG2867 # Protein_GI_number: 15832735 # Func_class: I Lipid transport and metabolism # Function: Oligoketide cyclase/lipid transport protein # Organism: Escherichia coli O157:H7 # 1 145 14 158 158 288 100.0 3e-78 MPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKAGISK TFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIELAFG RVFKELASNMVQAFTVRAKEVYSAR >gi|299857059|gb|ADWS01000005.1| GENE 27 24227 - 24709 450 160 aa, chain + ## HITS:1 COG:ECs3482 KEGG:ns NR:ns ## COG: ECs3482 COG0691 # Protein_GI_number: 15832736 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 308 100.0 3e-84 MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR >gi|299857059|gb|ADWS01000005.1| GENE 28 25563 - 26681 377 372 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 7 364 44 402 406 149 29 8e-35 MAKGGKKNWYFRYAVPVSKKRTKMSLGTYPHLTLARARALRDEYLSFLANGVDPQIHNND KAKALKSATEHTLQAVARKWLDEKVKTSGISQDHAADIWRSLERNVFPGLGNVPINEIRP KLLKQHLDPIEQRGVLETLRRIISRLNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMP ALPPSELPRFMESLTNASIRLETRMLIEWQLLTWVRPGEAVRARWSDIDTTNSIWNIPAD FMKMKKLHKVPLSKEALRILELMKSISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGG ELVAHGMRSIARTAAEESGKFRAEVLEAALAHSKKDEIIAAYNRAEYLIERQSLMQWWSD YVQAQRSNALVA >gi|299857059|gb|ADWS01000005.1| GENE 29 26720 - 27136 71 138 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3196 NR:ns ## KEGG: ECO103_3196 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 138 1 138 138 241 100.0 6e-63 METLFKVFEKFSSRPLFFIFFGLSLCEFFQKQSVLMNPSADNIAKLFAAMILVVFFTWGF EWLIFKFNVNLEPHDQGDIGPTIGTATLAVYLVYAFHFLSENPEALNLKLLTNSGFIYST TLLLFSLECMKLRRLKQK >gi|299857059|gb|ADWS01000005.1| GENE 30 27208 - 28956 469 582 aa, chain - ## HITS:1 COG:no KEGG:ECO111_3379 NR:ns ## KEGG: ECO111_3379 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 582 1 582 582 1117 100.0 0 MTVANYNSLVQKTFCENAIRSVVMIDDDFLTYSESIRALNNEVDLDYNKIDSSKRAATLE SFFQSKNMICDVDNGSVNFDVDRIRKSDLIIVDYHLDNNAPDKTLKLLQDLKDSDHLNMI VIYTRENLETVWMQISSTLKGALDINSLIIDYDNEDVQSYWEDVVLPNLNDNGNKALTRD ETIAYIKDSKPCRRIKRLIHDDAVLEDQKDKNFIAKMIAEYAVSRNAIISSNTSGNVIRG DESGVKWIQCGNIFVSLFHKVQDDHENDGDRIWQTLNDSLIEWKPSYYQLIKSEIQNAIE AEALSFVNHLANDHYGQAAWLNEILKSDSPDIRCRNIDFVFGNLSEELYQRLKNNNTLDE FIKSVFDSYSNEYANSGVAALLQYCSSKMDLPSNNDTYHEMYHALNMNLSSKNFEDGHIS TGTIFFDTESNKWYLCVSAACDLVPTQGNDPHHVRLSPHRLIKVLELFNASQSKALPFAE HSKYIYVMHKNQRKYLSIFEGDKTLPVVDYMVVLNHGTTVDGEEKNIISAVFLSNMDGNV QNVPVRLKLKSQLRTGYAERYQAIASQYSSRIGVDYVSMMLP >gi|299857059|gb|ADWS01000005.1| GENE 31 28958 - 29392 129 144 aa, chain - ## HITS:1 COG:no KEGG:ECO111_3380 NR:ns ## KEGG: ECO111_3380 # Name: not_defined # Def: putative histidine kinase-like protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 144 471 614 614 301 100.0 4e-81 MDYVLKFFGERFERQRITIEFSEEFKQIAITDIPSRIYPVFTNIINNAMYWVSLSNNRLI KIGFVNSLVIIANSGPAIDTDDIPRLFELFYSKRANGHGVGLYLCRENLAVAHHKIWYSE PDEGDNYLIKDGANFVIQFNGVEF >gi|299857059|gb|ADWS01000005.1| GENE 32 30828 - 31694 249 288 aa, chain - ## HITS:1 COG:tra5_g1 KEGG:ns NR:ns ## COG: tra5_g1 COG2801 # Protein_GI_number: 16128357 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 288 1 288 288 578 100.0 1e-165 MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRS KQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLE QDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMA LWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVE CIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA >gi|299857059|gb|ADWS01000005.1| GENE 33 31691 - 31990 280 99 aa, chain - ## HITS:1 COG:b0298 KEGG:ns NR:ns ## COG: b0298 COG2963 # Protein_GI_number: 16128283 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 99 4 102 102 116 98.0 9e-27 MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWCSKQQNQQTSS ERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK >gi|299857059|gb|ADWS01000005.1| GENE 34 32235 - 32666 173 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293413858|ref|ZP_06656507.1| ## NR: gi|293413858|ref|ZP_06656507.1| predicted protein [Escherichia coli B185] # 1 143 5 147 147 266 100.0 4e-70 MKIEANFLTHPYDYNASLNNYLHYFENFSHNDWNKDSCGGYFTFRDDDRECVLFFLNYGD NFSLRYDYTQSSDGIVSCWYSNHEDDKMNIIVDADTEQFIPLGSCLPPDITLSVIKDFFK NPLEKSKKVKWMNADDIDWSSVY >gi|299857059|gb|ADWS01000005.1| GENE 35 32678 - 37519 3115 1613 aa, chain - ## HITS:1 COG:ECs0605 KEGG:ns NR:ns ## COG: ECs0605 COG3209 # Protein_GI_number: 15829859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 1473 1 1464 1616 2818 95.0 0 MSEGPGGPQGATAGGTLAMRMLSQQAMVASQMKRAANDKAIAQMLASKKSGPPAARLGDE IQHKSFLGALAGAVLGAIVTIAEGCLIMAACATGPYALVLVPALMYASYKASDYVEEKQN QLESWINSFCDTDGAINTGSENVKINGELAARAAVTLPPPPPPGAIPEVPQGEPSWGDIA TDLLESAAEKAVPLAKAWGNAVITLTDSNAGFMDRVSAGASLLFPAGPVLMEFATMVGGR GEIKKEVDFPEAGEDTALCDKENKPPRIAQGSSNVFINNQPAARKGDKLECSAVIVGGSP DVFIGGEQVTYLDIQPEFPPWQRMILGGITIASYLLPPAGLLGKLKNLARLGKLGNLLGK SGKLLGAKLGALLGKTGKSLKSIANKVIRWVTDPVDPVTGAYCDERTDFTLGQTLPLSFT RFHSSVLPLHGLTGVGWSDSWSEYAWVREQGNRVDIISQGATLRFAFDGDSDTTVNPYHA QYILRRRDDYLELFDRDALSSRFFYDAFPGMRLRHPVTDDTSDDRLAHSPNDRMYMLGGM SDTASNRITFERDSQYRITGVSHTDGIRLKLTYHASGYLKAIHRTDNGIQTLATYEQDAR GRLTEADARLDYHLFYEYDAADRIIRWSDNDQTWSRFTYDEQGRCVNVTGAEGYYNATLD YGDGCTTVTDGKGTHRYYYDPDGNILREEAPDGSTTTYEWDEFHHLLARHSPAGRVEKFE YNAALGQLSRYTAADGAEWLYRYDERGLLSNITDPAGQTWTQQCDERGLPVSLVSPQGEE TRLAYTPQGLLSGIFRQDERRLGIEYDHHNRPETLTDVMGREHHTEYSGHDLPVKMRGPG GQSVRLQWQQHHKLSGIERAGTGAEGFRYDRHGNLLAYTDGNGVVWTMEYGPFDLPVART DGEGHRWQYRYDKDTLQLTEVINPQGESYRYILDNCGRVTEERDWGGVVWRYRYDADGLC TARVNGLEETILYSRDAAGRLAEVITPEGKTQYAYDKSGRLTGIFSPDGTSQRTGYDERG RVNVTTQGRRAIEYHYPDEHTVIRCILPPEDERDRHPDESLLKTTYRYNAAGELTEVILP GDETLTFSRDEAGREVFRHSNRGFACEQGWNAASQLVTQRAGFFPEETTWGGLLPSLVRE YRYDSAGNVSAVTSREDYGRETRREYRLDRNGQVTAVTASGTGLGYGEGDESYGYDSCGY LKAQSAGRHRISEETDQYAGGHRLKQAGNTQYDYDAAGRMVSRTKHRDGYRPETERFRWD SRDQLTGYCSAQGEQWEYRHDASGRRTEKRCDRKKIRFTYLWDGDSIAEIREYRDDKLYS VRHLVFNGFELISQQFSRVRQPHPSVAPQWVTRTNHAVSDPTGRPLMLFNSEGKTVWRPG QTSLWGLALSLPADTDYPDPRGELDPEADPGLLYAGQWQDAESGLCYNRFRYYEPESGMY LVSDPLGLQGGEQTYRYVHNPNESIDPLGLAPCPWQIIDRFRSLKAGLSRLGEHIPHQGD GFGTVAYIEINGRKIFGVNSSVLSDKAKDLGRYWVDRLKLGRGVSQVAYHAEAHSLMRAF EKFRGKLPNEITMYVDRYTCPNCQKYLPLLMKEMGIDKLIIYSKNGKVVLLPK >gi|299857059|gb|ADWS01000005.1| GENE 36 37539 - 38000 338 153 aa, chain - ## HITS:1 COG:ECs0606 KEGG:ns NR:ns ## COG: ECs0606 COG5435 # Protein_GI_number: 15829860 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 288 98.0 4e-78 MQFTFNEGHIQLPSQWQDQSMQVLVSTDNSGINLVITREAVPQGTLTPELYQETLALYQG KLDGYTEHACREITLAEAPAWLLDYSWNGPEDEGNQGRISQIAVFQRRGDTLLTFTFSTS LSLKNSQKTMLLEVIKSFTPLPPENDIQKDQPR >gi|299857059|gb|ADWS01000005.1| GENE 37 38028 - 39929 1345 633 aa, chain - ## HITS:1 COG:ECs0607 KEGG:ns NR:ns ## COG: ECs0607 COG3501 # Protein_GI_number: 15829861 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 633 1 633 633 1255 97.0 0 MSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFAQVLDKMAYL TIWQGDEVQRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFRIFQNEDIKSIL GTMLQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFFYEEHAYKSTDQS LVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTKDYTFKRPGWAGR FEQEGQHQDYQRTQYEVYDYPGRFKSAHGQNFARWQMDGWRNNAETARGMSRSPEIWPGR RIVLTGHPQANLNREWQVVASELHGEQPQAVPGRQGAGTALENHFAVIPADRTWRPQPLL KPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPADQDSSCWIRVAQAWAGTGFG HLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHQENRTPGSLPGTKTQMNIRSKTYMGSGFN ELKFDDATGREQVYIHAQKNMDTEVLNDRTTTVKHDHRETVKNDQTVTIQEGNRLLTVEK GHKITGVLKGSLSEDVFQDRGTIAGSVHVDAVNNGGEGDGIQAYTAIKEILLAVEESKIA LTPDGIQLQVGESTVIRLSKDGITIVGGSVFIN >gi|299857059|gb|ADWS01000005.1| GENE 38 40749 - 40961 88 70 aa, chain - ## HITS:1 COG:no KEGG:ECO103_1586 NR:ns ## KEGG: ECO103_1586 # Name: yncH # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 70 1 70 70 108 98.0 4e-23 MLCFLIYITLPFIQLVYFISSEKKLTIHIVQMFHLLSQVFYNLKKFLMMDMLGVGDAINI NTNKNIRQVC >gi|299857059|gb|ADWS01000005.1| GENE 39 41037 - 41654 464 205 aa, chain - ## HITS:1 COG:ECs2058 KEGG:ns NR:ns ## COG: ECs2058 COG0625 # Protein_GI_number: 15831312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 411 97.0 1e-115 MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGASRELLKTLNPLCQVPTLALEN DEIMTETAAIAFMVLDRRPDLAPPVGRAERQQFQRLLVWLVANVYPTFTFADYPERWASD APEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDCYLCTMRTWGPGHEWFQDNAQ NISAIADAVCQLPKLQEVLKRNEII >gi|299857059|gb|ADWS01000005.1| GENE 40 41920 - 43419 1385 499 aa, chain + ## HITS:1 COG:ECs2057 KEGG:ns NR:ns ## COG: ECs2057 COG1113 # Protein_GI_number: 15831311 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 499 18 516 516 917 99.0 0 MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAG PALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAM TGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLA IVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVG TAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGV PYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKMSRQHVPYAGILATL VVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKQGKAADVSFKLP GAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIAALPIIGILLVIGWFGVRKRVAEIHSTAP VVEEDEEKQEIVFKPETAS >gi|299857059|gb|ADWS01000005.1| GENE 41 43534 - 44595 1219 353 aa, chain - ## HITS:1 COG:ECs2056 KEGG:ns NR:ns ## COG: ECs2056 COG3391 # Protein_GI_number: 15831310 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 622 99.0 1e-178 MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATS QSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGENIKLKTAI QNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVID AKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL >gi|299857059|gb|ADWS01000005.1| GENE 42 44837 - 46939 1529 700 aa, chain + ## HITS:1 COG:yncD KEGG:ns NR:ns ## COG: yncD COG1629 # Protein_GI_number: 16129410 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli K12 # 1 700 1 700 700 1375 99.0 0 MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATP RINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVDGIPATMPDGQG QTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYG LKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFN SVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSAQDDMSVMMY AGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYEN MSENRKGYNNFRLNSGMPEYGQKGELRRDERNLMWNIDPYLQTQWQLSEKLSLDAGVRYS SVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELS YRADGQSGMNFGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRTTYK NAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFA SIGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVD NLFDKEYVGSVIVNESNGRYYEPSPGRNYGVGMNIAWRFE >gi|299857059|gb|ADWS01000005.1| GENE 43 46975 - 47640 514 221 aa, chain - ## HITS:1 COG:yncC KEGG:ns NR:ns ## COG: yncC COG1802 # Protein_GI_number: 16129409 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 221 20 240 240 398 99.0 1e-111 MPGMGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVS VNALSVAPAQAFTVPEVRKRQLDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQ QAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELRE HIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQYNR >gi|299857059|gb|ADWS01000005.1| GENE 44 47838 - 48875 983 345 aa, chain - ## HITS:1 COG:yncB KEGG:ns NR:ns ## COG: yncB COG2130 # Protein_GI_number: 16129408 # Func_class: R General function prediction only # Function: Putative NADP-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 345 32 376 376 698 98.0 0 MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLRTVYLSLDPYMRGRMSD EPSYSPPVDIGGVMVGGTVSRVVESNHPDYQPGDWVLGYSGWQDYDISSGDDLVKLGDHP QNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGV AGGAEKCRHAIEVLGFDVCLDHHADDFAEQLVKACPKGIDIYYENVGGKVFDAVLPLLNT SARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIHEFQKEMG QWVKEDKIHYHEDITDGLENAPQTFIGLLKGKNFGKVVIRVAGDD >gi|299857059|gb|ADWS01000005.1| GENE 45 49056 - 49574 501 172 aa, chain + ## HITS:1 COG:ECs2052 KEGG:ns NR:ns ## COG: ECs2052 COG1247 # Protein_GI_number: 15831306 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 352 99.0 2e-97 MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDG VVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLSRLIDEARDCGKHVMVAGI ESQNQASLHLHHSLGFVVTAQMPQVGTKFGRWLDLTFMQLQLDERTEPDAIG >gi|299857059|gb|ADWS01000005.1| GENE 46 49571 - 50020 372 149 aa, chain + ## HITS:1 COG:ydcZ KEGG:ns NR:ns ## COG: ydcZ COG3238 # Protein_GI_number: 16129406 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 149 1 149 149 222 100.0 2e-58 MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLVGIVLFVSILWFKQGMA GFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAVLVASQLIGGLMLDIFRSH GVPLRALFGPICGAILLVVGAWLVARRSF >gi|299857059|gb|ADWS01000005.1| GENE 47 50021 - 50254 369 77 aa, chain - ## HITS:1 COG:no KEGG:G2583_1807 NR:ns ## KEGG: G2583_1807 # Name: ydcY # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 77 1 77 77 112 100.0 5e-24 MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQQQRLRTAIAHHGRKHK EDMEARHEQLTKGGTIL >gi|299857059|gb|ADWS01000005.1| GENE 48 50340 - 50561 136 73 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_1442 NR:ns ## KEGG: ECIAI1_1442 # Name: ydcX # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 73 10 82 82 117 100.0 1e-25 MTHICARFIHLAGRPYMSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATW PMSFPVALLFSLF >gi|299857059|gb|ADWS01000005.1| GENE 49 50900 - 52324 1418 474 aa, chain - ## HITS:1 COG:ECs2048 KEGG:ns NR:ns ## COG: ECs2048 COG1012 # Protein_GI_number: 15831302 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 474 1 474 474 927 99.0 0 MQHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTP KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT ALKLAELAKDIFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSI KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKL GAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATGHIKVITGGEKRKGNGYYY APTLLAGALQDDAIVQKEVFGPVVSVTLFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR VSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH >gi|299857059|gb|ADWS01000005.1| GENE 50 52346 - 53140 694 264 aa, chain - ## HITS:1 COG:ECs2047 KEGG:ns NR:ns ## COG: ECs2047 COG1177 # Protein_GI_number: 15831301 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 422 100.0 1e-118 MHSERAPFFLKLAAWGGVVFLHFPILIIAAYAFNTEDAAFSFPPQGLTLRWFSVAAQRSD ILDAVTLSLKVAALATLMALVLGTLAAAALWRRDFFGKNAISLLLLLPIALPGIVTGLAL LTAFKTINLEPGFFTIVVGHATFCVVVVFNNVIARFRRTSWSLVEASMDLGANGWQTFRY VVLPNLSSALLAGGMLAFALSFDEIIVTTFTAGHERTLPLWLLNQLGRPRDVPVTNVVAL LVMLVTTLPILGAWWLTREGDNGQ >gi|299857059|gb|ADWS01000005.1| GENE 51 53130 - 54071 1010 313 aa, chain - ## HITS:1 COG:ECs2046 KEGG:ns NR:ns ## COG: ECs2046 COG1176 # Protein_GI_number: 15831300 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli O157:H7 # 1 313 1 313 313 506 99.0 1e-143 MAMNVLQSPSRPGLGKVSGFFWRNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFD DFTMSVTPELTLANIRALFNPANYDIILRTLTMAVAVTIASAILAFPMAWYMARYTSGKM KAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGGNTL STSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPG IAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIVLIALY LAFVKRLGAFDAL >gi|299857059|gb|ADWS01000005.1| GENE 52 54072 - 55085 891 337 aa, chain - ## HITS:1 COG:ydcT KEGG:ns NR:ns ## COG: ydcT COG3842 # Protein_GI_number: 16129400 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli K12 # 1 337 1 337 337 665 99.0 0 MTYAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGA ISIFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVGYGLMVKGVNKKQRHAMAQEALE KVALGFVQQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKL QQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNV FDGLMAEKLCGMTGSFALRPEHIRLNTPGELQANGTIQAVQYQGAATRFELKLNGGEKLL VSQANMTGEELPATLTPGQQVMVSWSRDVMVPLVEER >gi|299857059|gb|ADWS01000005.1| GENE 53 55103 - 56248 1227 381 aa, chain - ## HITS:1 COG:ydcS KEGG:ns NR:ns ## COG: ydcS COG0687 # Protein_GI_number: 16129399 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 381 1 381 381 768 99.0 0 MSKTFARSSLCALTMTIMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQF EKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKT LDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKG RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHDTT VQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAY KWMNWSLTPKVQGDVAAWFGSLPVVPEGCKANPLLGEKGCETNGFNYFDKIAFWKTPIAE GGKFVPYSRWTQDYIAIMGGR >gi|299857059|gb|ADWS01000005.1| GENE 54 56493 - 57104 452 203 aa, chain - ## HITS:1 COG:ydcR KEGG:ns NR:ns ## COG: ydcR COG1167 # Protein_GI_number: 16129398 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli K12 # 1 203 266 468 468 412 99.0 1e-115 MALLNQYNVTLIEDDVYSELYFGREKPLPAKAWDRHDGVLHCSSFSKCLVPGFRIGWVAA GKHARKIQRLQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQRAWQALLRY LPAEVKIHHSDSGYFLWLELPEPLDAGELSLAALTHHISIAPGKMFSTGENWSRFFRFNT AWQWGEREEQAVKQLGKLIQERL >gi|299857059|gb|ADWS01000005.1| GENE 55 57077 - 57898 605 273 aa, chain - ## HITS:1 COG:ydcR KEGG:ns NR:ns ## COG: ydcR COG1167 # Protein_GI_number: 16129398 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli K12 # 1 262 1 262 468 503 99.0 1e-142 MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESLGYIIARP QSGYYVAPQAIKMPKAPVIPVTRDEAVDINTYIFDMLQASRDPSVVPFASAFPDPRLFPL QQLNRSLAQVSKTATAMSVIENLPPGNAELRQAIARRYALQGITISPDEIVITAGALEAL NLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELALQDYPV KACWLMTNSQNPLGFTLTPQKKHNWWRYSISTT >gi|299857059|gb|ADWS01000005.1| GENE 56 57977 - 58414 402 145 aa, chain - ## HITS:1 COG:ECs2042 KEGG:ns NR:ns ## COG: ECs2042 COG1598 # Protein_GI_number: 15831296 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 145 1 145 145 262 99.0 1e-70 MRGTVEIMRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFED NELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGKPKQEITRLFNL HHATKIDAVQLAAKALGKELSLVMV >gi|299857059|gb|ADWS01000005.1| GENE 57 58897 - 59067 175 56 aa, chain + ## HITS:1 COG:no KEGG:JW1432 NR:ns ## KEGG: JW1432 # Name: yncJ # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 56 21 76 76 102 100.0 6e-21 MAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLREHFYWQKSRKPEAGQR >gi|299857059|gb|ADWS01000005.1| GENE 58 59159 - 61120 1681 653 aa, chain - ## HITS:1 COG:ECs2039 KEGG:ns NR:ns ## COG: ECs2039 COG0826 # Protein_GI_number: 15831293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 653 15 667 667 1350 99.0 0 MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHR YGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCD IRTVEKAKFLSDVGFTQIVLARELNLEQIRAIHQATDATIEFFIHGALCVAYSGQCYISH AQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFK IEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYF VNARKGDIGAFDSPKFIGLPVGEVLKVAKDHLDVAVTEPLANGDGLNVMIKREVVGFRAN TVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQALTKTSSERRVAVDIELGGW QEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTLYYARDVQINLPG ALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAR EFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVN GDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDELLKTLPKRKG >gi|299857059|gb|ADWS01000005.1| GENE 59 61193 - 61729 341 178 aa, chain - ## HITS:1 COG:ydcN KEGG:ns NR:ns ## COG: ydcN COG1396 # Protein_GI_number: 16129393 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 178 1 178 178 361 100.0 1e-100 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS >gi|299857059|gb|ADWS01000005.1| GENE 60 61821 - 62996 866 391 aa, chain + ## HITS:1 COG:ydcO KEGG:ns NR:ns ## COG: ydcO COG3135 # Protein_GI_number: 16129392 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in benzoate metabolism # Organism: Escherichia coli K12 # 1 391 88 478 478 637 99.0 0 MRLFSIPPPTLLAGFLAVLIGYASSAAIIWQAAIVAGATTAQISGWMTALGLAMGVSTLT LTLWYRVPVLTAWSTPGAALLVTGLQGLTLNEAIGVFIVTNALIVLCGITGLFARLMRII PHSLAAAMLAGILLRFGLQAFASLDGQFTLCGSMLLVWLATKAVAPRYAVIAAMIIGIVI VIAQGDVVTTDVVFKPVLPTYITPDFSFAHSLSVALPLFLVTMASQNAPGIAAMKAAGYS APVSPLIVFTGLLALVFSPFGVYSVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLI AGLFGSAITGMMAALPVSWIQMLAGLALLSTISGSLYQALHNERERDAAVVAFLVTASGL TLVGIGSAFWGLIAGGVCYVVLNLIADRNRY >gi|299857059|gb|ADWS01000005.1| GENE 61 63036 - 64184 188 382 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764777|ref|ZP_02171831.1| ribosomal protein L22 [Bacillus selenitireducens MLS10] # 137 358 6 218 225 77 26 7e-13 MRRFAGACRFVFNRALALQNENHEAGNKYIPYGKMASWLVEWKNATETQWLKDSPSQPLQ QSLKDLERAYKNFFRKRAAFPRFKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNS RQVTGVVKNVTVSQSCGKWYISIQTESEVSTPVHPSASMVGLDAGVAKLATLSDGTVFEP VNSFQKNQKTLARLQRQLSRRVKFSNNWQKQKRKIQRLHSRIANIRRDYLHKVTTTVSKN HAMIVIEDLKVSNMSKSAAGTVSQPGRNVRAKSGLNRSILDQGWYEMRRQLEYKQLWRGG QVLAVPPAYTSQRCACCGHTAKENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLAC GEMVQSGRPLKQEPTEMIQATA >gi|299857059|gb|ADWS01000005.1| GENE 62 64699 - 64887 251 62 aa, chain - ## HITS:1 COG:no KEGG:ECO103_1985 NR:ns ## KEGG: ECO103_1985 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 62 1 62 62 96 100.0 2e-19 MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVNTVRSYPVRRKTPSFRA GI >gi|299857059|gb|ADWS01000005.1| GENE 63 64891 - 65250 369 119 aa, chain - ## HITS:1 COG:ECs2506 KEGG:ns NR:ns ## COG: ECs2506 COG3615 # Protein_GI_number: 15831760 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein/domain, possibly involved in tellurite resistance # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 243 100.0 6e-65 MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHS AEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK >gi|299857059|gb|ADWS01000005.1| GENE 64 65421 - 66059 553 212 aa, chain - ## HITS:1 COG:ECs2507 KEGG:ns NR:ns ## COG: ECs2507 COG1280 # Protein_GI_number: 15831761 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 212 1 212 212 360 98.0 2e-99 MFAEYGVLNYWTYLVGAIFIVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFL AWAGVATLIKTTPILFNIIRYLGAFYLLYLGSKILYATLKGKNNEAKSDEPQYGAIFKRA LILSLTNPKAILFYVSFFVQFIDVNAPHTGISFFILATTLELVSFCYLSFLIISGAFVTQ YIRTKKKLTKVGNSLIGLMFVGFAARLATLQS >gi|299857059|gb|ADWS01000005.1| GENE 65 66186 - 67109 817 307 aa, chain - ## HITS:1 COG:ECs2508 KEGG:ns NR:ns ## COG: ECs2508 COG0583 # Protein_GI_number: 15831762 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 307 8 314 314 627 100.0 1e-180 MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLEQTLNVVLLHRTTRRVT ITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISSFGFGRQVVAPALSALAKA YPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNYRILCASPEFIAQHGA PKHLTDLSALPCLVIKERDHPFGVWQLRNKEGHHAIKVTGPLSSNHGEIVHQWCLDGQGI ALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVSRLATSAKVRITVEFLRQYFAEHYP NFSLEHA >gi|299857059|gb|ADWS01000005.1| GENE 66 67212 - 68297 1039 361 aa, chain + ## HITS:1 COG:yeaU KEGG:ns NR:ns ## COG: yeaU COG0473 # Protein_GI_number: 16129754 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Escherichia coli K12 # 1 361 1 361 361 761 99.0 0 MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFALSFEQMEWASCEYYSHHGKMMPD DWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQYVNLRPVRLFPGVPCPLA GKQPGDIDFYVVRENTEGEYSSLGCRVNEGTEHEVVIQESVFTRRGVDRILRYAFELAQS RPRKTLTSATKSNGLAISMPYWDERVEAMAENYPEIRWDKQHIDILCARFVMQPERFDVV VASNLFGDILSDLGPACTGTIGIAPSANLNPERTFPSLFEPVHGSAPDIYGKNIANPIAT IWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIAHGPKTPDMKGNATTPQVADAICKIIL R >gi|299857059|gb|ADWS01000005.1| GENE 67 68548 - 70158 1625 536 aa, chain + ## HITS:1 COG:ECs2510 KEGG:ns NR:ns ## COG: ECs2510 COG1292 # Protein_GI_number: 15831764 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli O157:H7 # 56 536 1 481 481 907 99.0 0 MMSNVKKKDVPLISISLVAILFIAAALSLFPQQSADAANAIYTFVTRTLGSAVQVLVLLA MGLVIYLATSKYGNIRLGEGKPEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQTPGLN IAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFHVRKNKGLSLSGIIAAITGVR PQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTVQAFVILLSGGIF CLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPTEFITNSIINAIGLTTQNFLQMSLF TDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLILGSTVGCWFFF GVMESYAIHQFINGVINVPQVLETLGGETAVQQVLMSLPAGKLFLAAYLGVMIIFLASHM DAVAYTMAATSTRNLQEGDDPDRGLRLFWCVVITLIPLSILFTGASLETMKTTVVLTALP FLVILLVKVGGFIRWLKQDYADIPAHQVEHYLPQTPVEALEKTPVLPAGTVFKGDN >gi|299857059|gb|ADWS01000005.1| GENE 68 70190 - 71314 1172 374 aa, chain + ## HITS:1 COG:ECs2511 KEGG:ns NR:ns ## COG: ECs2511 COG4638 # Protein_GI_number: 15831765 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Escherichia coli O157:H7 # 1 374 1 374 374 800 99.0 0 MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANAN DYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDG NLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPNATSVEDQLPGLGAKVLEACP EVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPGFSDSVQVDRYWHTIHGNWTLQY GFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPIKGMMTVIYEFPVDSETTLQNYDIY FTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG IAHFHNLLAQVFKD >gi|299857059|gb|ADWS01000005.1| GENE 69 71370 - 72335 620 321 aa, chain + ## HITS:1 COG:yeaX KEGG:ns NR:ns ## COG: yeaX COG1018 # Protein_GI_number: 16129757 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 321 1 321 321 648 99.0 0 MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHIIVQMSDGDNQYSNAYSL LSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGDRLTISTPNNLFALIPSARKHLFIAG GIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELVQHPQAEKVHLHHSSTGTRLE LARLLADIEPGTHVYTCGPEALIEAVRSEAARLDIAADTLHFEQFAIEDKTGDAFTLVLA RSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCGTCETAILEGEADHRDQYFSDEERA SQQSMLICCSRAKGKRLVLDL >gi|299857059|gb|ADWS01000005.1| GENE 70 72389 - 73504 986 371 aa, chain - ## HITS:1 COG:ECs2513 KEGG:ns NR:ns ## COG: ECs2513 COG0349 # Protein_GI_number: 15831767 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Escherichia coli O157:H7 # 1 371 5 375 375 727 100.0 0 MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWS PLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEE YSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECR LMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHL WSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEEALPQPMLNLMDMPGYR KAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAE ALHNLLQEYPQ >gi|299857059|gb|ADWS01000005.1| GENE 71 73586 - 75337 1523 583 aa, chain - ## HITS:1 COG:fadD KEGG:ns NR:ns ## COG: fadD COG0318 # Protein_GI_number: 16129759 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli K12 # 23 583 1 561 561 1149 99.0 0 MLTACISFGVAMTTNTHFRGEELKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYAD QPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAG MIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLST AKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQ NLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQ QVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNE VPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMI LVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCR RQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA >gi|299857059|gb|ADWS01000005.1| GENE 72 75476 - 76057 595 193 aa, chain - ## HITS:1 COG:ECs2515 KEGG:ns NR:ns ## COG: ECs2515 COG3065 # Protein_GI_number: 15831769 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Starvation-inducible outer membrane lipoprotein # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 360 98.0 1e-99 MAVHKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRVMSAPQLYVGQEARFGG KVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVNGFLDPVDFRGQLVTVVGP ITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPIDPWFYGGRGWPYGYGGWGWY NPGPARVQTVVTE >gi|299857059|gb|ADWS01000005.1| GENE 73 76097 - 76792 706 231 aa, chain - ## HITS:1 COG:ECs2516 KEGG:ns NR:ns ## COG: ECs2516 COG1214 # Protein_GI_number: 15831770 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 450 99.0 1e-127 MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQDILTTSGTSLTDINALA YGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGAWRKNGATRVLAAIDARMG EVYWAEYQRDENGIWHGEETEAVLKPELVHERMQQLSGEWVTVGTGWQAWPDLGKESGLV LRDGEVLLPAAEDMLPIACQIFAEGKTVAVEHAEPVYLRNNVAWKKLPGKE >gi|299857059|gb|ADWS01000005.1| GENE 74 76850 - 78760 1581 636 aa, chain - ## HITS:1 COG:ECs2517 KEGG:ns NR:ns ## COG: ECs2517 COG1199 # Protein_GI_number: 15831771 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Escherichia coli O157:H7 # 1 636 1 636 636 1263 99.0 0 MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPAL RAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGG DLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPMYKDCF VVKARKKAMDADVVVVNHHLFLADMVVKDSGFGELIPEADVMIFDEAHQLPDIASQYFGQ SLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLA NPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLKEINQPGYSYW YECTSRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGIEQAESL LLPSPFDYSRQALLCVPRNLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRDL AEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKL PFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNR LVMRPYGATFLASLPPAPRTRDIARAVRFLAIPSSR >gi|299857059|gb|ADWS01000005.1| GENE 75 78892 - 79236 509 114 aa, chain + ## HITS:1 COG:yoaB KEGG:ns NR:ns ## COG: yoaB COG0251 # Protein_GI_number: 16129763 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 114 17 130 130 209 100.0 9e-55 MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSI LDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV >gi|299857059|gb|ADWS01000005.1| GENE 76 79658 - 79957 237 99 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1983 NR:ns ## KEGG: EC55989_1983 # Name: yoaC # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 99 21 119 119 185 98.0 4e-46 MPAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITARADQEGWNP GFTEKMVGWAKKMESGERTVIKNPEYFSKYMQEELKALV >gi|299857059|gb|ADWS01000005.1| GENE 77 80077 - 80256 325 59 aa, chain - ## HITS:1 COG:ECs2520 KEGG:ns NR:ns ## COG: ECs2520 COG3140 # Protein_GI_number: 15831774 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 59 1 59 59 83 100.0 1e-16 MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRANHSGERIVARFEDEDE >gi|299857059|gb|ADWS01000005.1| GENE 78 80330 - 81691 1068 453 aa, chain + ## HITS:1 COG:ECs2521 KEGG:ns NR:ns ## COG: ECs2521 COG0147 # Protein_GI_number: 15831775 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 920 98.0 0 MKTLSPAVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYSRFDIVVADPICTLTTF GKETVVSESEKRTTTTDDPLQVLQQVLDHADIRPTHNEDLPFQGGALGLFGYDLGRRFES LPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDVNARRAWLESQQFSPQEDFTL TSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDEWQAFLQLNQANRAP FSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGTLPRLPDPQEDSKQAEKLANSAKDR AENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITARLPEQLHASDLLRA AFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTSITIRTLTAINGQIY CSAGGGIVADSQEEAEYQETFDKVNKILRQLEK >gi|299857059|gb|ADWS01000005.1| GENE 79 81695 - 82273 377 192 aa, chain + ## HITS:1 COG:ECs2522 KEGG:ns NR:ns ## COG: ECs2522 COG0494 # Protein_GI_number: 15831776 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 192 1 192 192 344 100.0 7e-95 MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAG QVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIP PDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGI IRELALQIGVKP >gi|299857059|gb|ADWS01000005.1| GENE 80 82457 - 83821 1518 454 aa, chain + ## HITS:1 COG:sdaA KEGG:ns NR:ns ## COG: sdaA COG1760 # Protein_GI_number: 16129768 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli K12 # 1 454 1 454 454 922 99.0 0 MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTRVAVDVYGSLSLTGKGH HTDIAIIMGLAGNEPATVDIDSIPGFTRDVEERERLLLAQGRHEVDFPRDNGMRFHNGNL PLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQDAANEVSVPYPFKSATELLAY CNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQACIDRGMNTEGVLPGPLRVPRRA SALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYY DHFIESVSPDIYTRYFMAAGAIGALYKMNASISGAEVGCQGEVGVACSMAAAGLTELLGG SPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINAARMALRRTSAPRVS LDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD >gi|299857059|gb|ADWS01000005.1| GENE 81 83952 - 85550 1119 532 aa, chain + ## HITS:1 COG:yoaD_2 KEGG:ns NR:ns ## COG: yoaD_2 COG2200 # Protein_GI_number: 16129769 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 261 532 1 272 272 561 100.0 1e-159 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR >gi|299857059|gb|ADWS01000005.1| GENE 82 85554 - 87110 1815 518 aa, chain - ## HITS:1 COG:yoaE_2 KEGG:ns NR:ns ## COG: yoaE_2 COG1253 # Protein_GI_number: 16129770 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli K12 # 231 518 1 288 288 538 99.0 1e-153 MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLG LLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGK GYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVN QHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQS TLPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRSL RGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEEG VDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIAG EFPDADETPEITTDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVAGLVISANGHIPR VGDVIDVGPLHITIIEANDYRVDLVRIVKEQPAHDEDE >gi|299857059|gb|ADWS01000005.1| GENE 83 87573 - 88544 1142 323 aa, chain + ## HITS:1 COG:ECs2527_2 KEGG:ns NR:ns ## COG: ECs2527_2 COG3444 # Protein_GI_number: 15831781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 158 323 1 166 166 311 100.0 1e-84 MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYNAQLAKLDTTK GVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETLMARDDDPSFDELVALAVE TGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPNDYMVIGLARIDDRLIHGQVAT RWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERV MLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQVNNAVSVDEKDIEAFKKLNARGIE LEVRKVSTDPKLKMMDLISKIDK >gi|299857059|gb|ADWS01000005.1| GENE 84 88607 - 89407 989 266 aa, chain + ## HITS:1 COG:ECs2528 KEGG:ns NR:ns ## COG: ECs2528 COG3715 # Protein_GI_number: 15831782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 394 100.0 1e-109 MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIA LGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPLAAAGQVLTIIVRTITVAF QHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEVVTN GLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVLYIQ LSPKYNRVAGAPAQAAGNNDLDNELD >gi|299857059|gb|ADWS01000005.1| GENE 85 89420 - 90271 1053 283 aa, chain + ## HITS:1 COG:ECs2529 KEGG:ns NR:ns ## COG: ECs2529 COG3716 # Protein_GI_number: 15831783 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 283 4 286 286 559 100.0 1e-159 MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCFSMVPAIRRLYPENNEA RKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDGAINGIKVGLMGPLAGVGD PIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLATRYYGVAYGYSKGIDIVKDM GGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSRITDQTGKEHVTTVQTILDQLMP GLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGYACGLLGL >gi|299857059|gb|ADWS01000005.1| GENE 86 90326 - 90784 303 152 aa, chain + ## HITS:1 COG:yobD KEGG:ns NR:ns ## COG: yobD COG4811 # Protein_GI_number: 16129774 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 152 1 152 152 255 99.0 2e-68 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG VLVMQLEHRRLLIRVRNIDDLEKIYKLLVSTQ >gi|299857059|gb|ADWS01000005.1| GENE 87 91213 - 91779 618 188 aa, chain + ## HITS:1 COG:ECs2531 KEGG:ns NR:ns ## COG: ECs2531 COG1971 # Protein_GI_number: 15831785 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 188 19 206 206 324 100.0 5e-89 MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGML ASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAM AVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ ILWTHFHG >gi|299857059|gb|ADWS01000005.1| GENE 88 91776 - 92501 539 241 aa, chain - ## HITS:1 COG:rrmA KEGG:ns NR:ns ## COG: rrmA COG0500 # Protein_GI_number: 16129776 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 241 29 269 269 494 99.0 1e-140 MAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATA VLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTS MDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGF TLQQSDELCYPMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRS Y >gi|299857059|gb|ADWS01000005.1| GENE 89 92751 - 92960 362 69 aa, chain - ## HITS:1 COG:ECs2533 KEGG:ns NR:ns ## COG: ECs2533 COG1278 # Protein_GI_number: 15831787 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 120 100.0 5e-28 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG PAAVNVTAI >gi|299857059|gb|ADWS01000005.1| GENE 90 93785 - 94072 237 95 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1877 NR:ns ## KEGG: ECS88_1877 # Name: yebO # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 95 1 95 95 134 100.0 1e-30 MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIELLEALLDQQKRQNALL RRLCEANEPEKADKKTVESQKSVEDEDIIRLVAER >gi|299857059|gb|ADWS01000005.1| GENE 91 94449 - 94688 255 79 aa, chain + ## HITS:1 COG:no KEGG:ECO103_2017 NR:ns ## KEGG: ECO103_2017 # Name: yobH # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 79 1 79 79 141 100.0 8e-33 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF LGITDCPLLRKSNIVVDNG >gi|299857059|gb|ADWS01000005.1| GENE 92 94831 - 95622 898 263 aa, chain - ## HITS:1 COG:ECs2537 KEGG:ns NR:ns ## COG: ECs2537 COG1414 # Protein_GI_number: 15831791 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 494 100.0 1e-140 MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKTLGY VAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISRLTKETIHLGALDEDSIVY IHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEVKQILEGVEYKRSTERTITST EALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTLRFSEERLQE YVAMLHTAARKISAQMGYHDYPF >gi|299857059|gb|ADWS01000005.1| GENE 93 95799 - 97172 982 457 aa, chain + ## HITS:1 COG:yebQ KEGG:ns NR:ns ## COG: yebQ COG0477 # Protein_GI_number: 16129782 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 457 38 494 494 753 100.0 0 MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIATDLHATPASSIWVVNAY QIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAA LMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLG IIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLLITALSGFAQGQSLTLIAAELVV MVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLG RSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPAD INIIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALML NQFGDNGTHVSLMAAAILAVIAACVSGLRITQPRSRA >gi|299857059|gb|ADWS01000005.1| GENE 94 97218 - 98099 838 293 aa, chain - ## HITS:1 COG:ECs2539 KEGG:ns NR:ns ## COG: ECs2539 COG0501 # Protein_GI_number: 15831793 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 293 1 293 293 550 100.0 1e-156 MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGFGGSFVSLLMSKWMALR SVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAPDINAFATGARRDASLVAV STGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVNTFVIFISRILAQLAAGFMGG NRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFSRHREFHADAGSAKLVGREKMIA ALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTHPPLDKRIEALRTGEYLK >gi|299857059|gb|ADWS01000005.1| GENE 95 98291 - 100339 2144 682 aa, chain - ## HITS:1 COG:ECs2540 KEGG:ns NR:ns ## COG: ECs2540 COG0793 # Protein_GI_number: 15831794 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Escherichia coli O157:H7 # 1 682 1 682 682 1320 99.0 0 MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATVSERVTSRFTRSHYRQF DLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKSELGDELRSGKLDVFYDLYNLAQ KRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEAELNALWDSKVKFDELSLKLA GKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTE MSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRL DDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLTRERIRLEDRAVKMSVKTVGKEKVGVL DIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVR DNNGKVREDSDTDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTV QQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDIIMPTGNEETETG EKFEDNALPWDSIDAATYVKSGDLTAFEPELLKEHNARIAKDPEFQNIMKDIARFNAMKD KRNIVSLNYAVREKENNEDDATRLARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETV NIALDLAKLEKARPAEQPAPVK >gi|299857059|gb|ADWS01000005.1| GENE 96 100359 - 101057 575 232 aa, chain - ## HITS:1 COG:proQm KEGG:ns NR:ns ## COG: proQm COG3109 # Protein_GI_number: 16132234 # Func_class: T Signal transduction mechanisms # Function: Activator of osmoprotectant transporter ProP # Organism: Escherichia coli K12 # 1 232 1 232 232 385 99.0 1e-107 MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSA LRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAK KREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQKPVEKAPKTVKAPREEQHTPV SDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF >gi|299857059|gb|ADWS01000005.1| GENE 97 101154 - 101651 303 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 3 159 6 161 165 121 41 3e-26 MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNWAGFYLLEDDTLVLGPF QGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDAASNSEIVLPLVVKNQIIG VLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFFASVAG >gi|299857059|gb|ADWS01000005.1| GENE 98 101886 - 103064 872 392 aa, chain + ## HITS:1 COG:ECs2543 KEGG:ns NR:ns ## COG: ECs2543 COG2995 # Protein_GI_number: 15831797 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Escherichia coli O157:H7 # 1 392 36 427 427 767 99.0 0 MLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLG IRIDANVMQGIWQMTKQGDTITGAMVFFCVIGAPLILVSSIAYLWFGNRLGMNLRPVLLM LERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWE RFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIV LLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTL LLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYF GAAVILTILAVEWLDSRLLWDAHESGNARFDD >gi|299857059|gb|ADWS01000005.1| GENE 99 103027 - 105666 2501 879 aa, chain + ## HITS:1 COG:yebT KEGG:ns NR:ns ## COG: yebT COG3008 # Protein_GI_number: 16129787 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Escherichia coli K12 # 1 879 1 879 879 1732 99.0 0 MHMSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRGNTVTIDFMSADG IVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLA GVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLNSGSL VYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKV KLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADST PLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSAL LTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAPESYGIDAGQPLILHGVQV GQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWIN GGIRILPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKF EVGEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRA LKGAISFDNLSGASASQRKGDKRILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGI DIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPY INVEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTG MTLGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGI AFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK >gi|299857059|gb|ADWS01000005.1| GENE 100 105746 - 107185 1210 479 aa, chain + ## HITS:1 COG:yebU_1 KEGG:ns NR:ns ## COG: yebU_1 COG0144 # Protein_GI_number: 16129788 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Escherichia coli K12 # 1 383 3 385 385 776 98.0 0 MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPY GWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADDNAPQR VMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF GAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGG TLVYSTCTLNQEENEAVCLWLKETYPVAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDC EGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKDREAGQIRQAAASVGLNWDGNLRLWQR DKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALATPDNVNAFELTPQE AEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTGNA >gi|299857059|gb|ADWS01000005.1| GENE 101 107303 - 107539 209 78 aa, chain + ## HITS:1 COG:no KEGG:ECSP_2410 NR:ns ## KEGG: ECSP_2410 # Name: yebV # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 78 1 78 78 157 100.0 2e-37 MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAWDAETSIPALLNGEHSV LYRTRYDQQSDAWIMRLA >gi|299857059|gb|ADWS01000005.1| GENE 102 107560 - 107835 132 91 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E2105 NR:ns ## KEGG: SbBS512_E2105 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 91 1 91 91 191 100.0 8e-48 MAGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCEDIVVDVYNTEQQCLYS MSDQRIRQGGCFPIEDFIDGFWRPAQEYGDF >gi|299857059|gb|ADWS01000005.1| GENE 103 107836 - 108492 500 218 aa, chain - ## HITS:1 COG:pphA KEGG:ns NR:ns ## COG: pphA COG0639 # Protein_GI_number: 16129791 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Escherichia coli K12 # 1 218 2 219 219 429 100.0 1e-120 MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGPQ SLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTALE KCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQVLWSRSRLGERQKGQGITGA DHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ >gi|299857059|gb|ADWS01000005.1| GENE 104 108888 - 109229 319 113 aa, chain - ## HITS:1 COG:no KEGG:ECO111_2347 NR:ns ## KEGG: ECO111_2347 # Name: yebY # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 113 1 113 113 195 100.0 5e-49 MMKKSILTFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPS TLVQYPLNDIAQKEVASGKTKAQPISVIQIDDPNNPGEKMSLAPFIERAEKLC >gi|299857059|gb|ADWS01000005.1| GENE 105 109242 - 110114 720 290 aa, chain - ## HITS:1 COG:yebZ KEGG:ns NR:ns ## COG: yebZ COG1276 # Protein_GI_number: 16129793 # Func_class: P Inorganic ion transport and metabolism # Function: Putative copper export protein # Organism: Escherichia coli K12 # 1 290 1 290 290 473 98.0 1e-133 MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFLRLQQHAAVWSLISATA MLAVQGGLMGTGWADVFSPNIWQAVLQTQFGGVWLWQIVLALVTLIVALMQPRNMPRLLF MLTTAQFILLAGIGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWR HQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVI ALANRYVLVPRMRQDEDRAAPWFEWMTKLEWAIGAVVLVIISLLATLEPF >gi|299857059|gb|ADWS01000005.1| GENE 106 110118 - 110492 342 124 aa, chain - ## HITS:1 COG:yobA KEGG:ns NR:ns ## COG: yobA COG2372 # Protein_GI_number: 16129794 # Func_class: R General function prediction only # Function: Uncharacterized protein, homolog of Cu resistance protein CopC # Organism: Escherichia coli K12 # 1 124 1 124 124 222 98.0 2e-58 MTSTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGF SGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYIVDWHVVSVDGHKTKGHYT FSVK >gi|299857059|gb|ADWS01000005.1| GENE 107 110631 - 110861 317 76 aa, chain + ## HITS:1 COG:no KEGG:ECP_1786 NR:ns ## KEGG: ECP_1786 # Name: not_defined # Def: DNA polymerase III subunit theta (EC:2.7.7.7) # Organism: E.coli_536 # Pathway: Purine metabolism [PATH:ecp00230]; Pyrimidine metabolism [PATH:ecp00240]; Metabolic pathways [PATH:ecp01100]; DNA replication [PATH:ecp03030]; Mismatch repair [PATH:ecp03430]; Homologous recombination [PATH:ecp03440] # 1 76 30 105 105 136 100.0 2e-31 MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQPEHLRSWFRERLIAHR LASVNLSRLPYEPKLK >gi|299857059|gb|ADWS01000005.1| GENE 108 110963 - 111619 393 218 aa, chain + ## HITS:1 COG:yobB KEGG:ns NR:ns ## COG: yobB COG0388 # Protein_GI_number: 16129796 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli K12 # 1 218 1 218 218 444 100.0 1e-125 MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSRRALPAP PDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRR SRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARGN SALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR >gi|299857059|gb|ADWS01000005.1| GENE 109 111643 - 112305 731 220 aa, chain + ## HITS:1 COG:exoX KEGG:ns NR:ns ## COG: exoX COG0847 # Protein_GI_number: 16129797 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli K12 # 1 220 1 220 220 459 100.0 1e-129 MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVAD KPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKT RKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYR GKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLENT >gi|299857059|gb|ADWS01000005.1| GENE 110 112302 - 114362 1896 686 aa, chain - ## HITS:1 COG:ptrB KEGG:ns NR:ns ## COG: ptrB COG1770 # Protein_GI_number: 16129798 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Escherichia coli K12 # 1 686 1 686 686 1404 99.0 0 MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQENSYGHRVMASQQALQDR ILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQSAFSEEWDEWETLLDANKR AAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWA NDSWTFYYVRKHPVTLLPYQVWRHAIGTPASQDKLIYEEKDDTYYVSLHKTTSKHYVVIH LASATTSEVRLLDAEMADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRM RDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAY VTWIAYNPEPETARLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDAANYRSEHLW IVARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIV HVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGV AINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDN VTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFK SYEGVAMEYAFLVALAQGTLPATPAD >gi|299857059|gb|ADWS01000005.1| GENE 111 114571 - 115230 780 219 aa, chain - ## HITS:1 COG:ECs2556 KEGG:ns NR:ns ## COG: ECs2556 COG2979 # Protein_GI_number: 15831810 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 348 98.0 5e-96 MANWLNQLQSLLGQSSSSTSSSADQGLGKLLVPGALGGLAGLLVANKSARKLLTKYGTNA LLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERTERLILALVFAAKSDGHID AKERAAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATGVRNEEEALEIYFLSCAAIDI DHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLAE >gi|299857059|gb|ADWS01000005.1| GENE 112 115437 - 115643 68 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|188494878|ref|ZP_03002148.1| ## NR: gi|188494878|ref|ZP_03002148.1| hypothetical protein Ec53638_0054 [Escherichia coli 53638] # 1 68 1 68 68 132 100.0 6e-30 MLIARCDAVASSQAYDCGAFWGGQGTRAASANGQSNYQKPLTPLIFRHSRFAVHADLVMN IGTFTTHG >gi|299857059|gb|ADWS01000005.1| GENE 113 115557 - 115913 215 118 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1203 NR:ns ## KEGG: ECIAI39_1203 # Name: yebF # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 118 5 122 122 222 100.0 4e-57 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWA DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR >gi|299857059|gb|ADWS01000005.1| GENE 114 115980 - 116270 370 96 aa, chain - ## HITS:1 COG:ECs2558 KEGG:ns NR:ns ## COG: ECs2558 COG3141 # Protein_GI_number: 15831812 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 148 100.0 2e-36 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA >gi|299857059|gb|ADWS01000005.1| GENE 115 116404 - 117582 1370 392 aa, chain + ## HITS:1 COG:purT KEGG:ns NR:ns ## COG: purT COG0027 # Protein_GI_number: 16129802 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Escherichia coli K12 # 1 392 1 392 392 753 99.0 0 MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVIN MLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRL AAEELQLPTSTYRFADSESLFREAVAAIGYPCIVKPVMSSSGKGQTFIRSAEQLAQAWEY AQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQEDGDYRESWQPQQMS PLALERAQEIARKVVLALGGYGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEF ALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQNVTFDNVQNAVGADLQIRLFGKPEIDG SRRLGVALATAESVVDAIERAKHAAGQVKVQG >gi|299857059|gb|ADWS01000005.1| GENE 116 117638 - 118279 897 213 aa, chain - ## HITS:1 COG:STM1884 KEGG:ns NR:ns ## COG: STM1884 COG0800 # Protein_GI_number: 16765226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Salmonella typhimurium LT2 # 1 212 1 212 213 373 97.0 1e-103 MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAI AKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSE LMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLC IGGSWLVPADALEAGDYDRITKLAREAVEGAKL >gi|299857059|gb|ADWS01000005.1| GENE 117 118316 - 120127 1590 603 aa, chain - ## HITS:1 COG:ECs2561 KEGG:ns NR:ns ## COG: ECs2561 COG0129 # Protein_GI_number: 15831815 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli O157:H7 # 1 603 1 603 603 1207 100.0 0 MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGNLAHGFAACQPEDKASL KSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVGQVAGGVPAMCDGVTQGQD GMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPGLTMAALSFGHLPAVFVPSGP MASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQ LPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWMPIGKMIDEKVVVNGIVALLATGGS TNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMARLYPNGPADINHFQAAGGVPVLVREL LKAGLLHEDVNTVAGFGLSRYTLEPWLNNGELDWREGAEKSLDSNVIASFEQPFSHHGGT KVLSGNLGRAVMKTSAVPVENQVIEAPAVVFESQHDVMPAFEAGLLDRDCVVVVRHQGPK ANGMPELHKLMPPLGVLLDRCFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRD GDIIRVNGQTGELTLLVDEAELAAREPHIPDLSASRVGTGRELFSALREKLSGAEQGATC ITF >gi|299857059|gb|ADWS01000005.1| GENE 118 120362 - 121837 1693 491 aa, chain - ## HITS:1 COG:zwf KEGG:ns NR:ns ## COG: zwf COG0364 # Protein_GI_number: 16129805 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Escherichia coli K12 # 1 491 1 491 491 1012 100.0 0 MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTRIIGVGRADWDKAAYTK VVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFSRLGAMLDQKNRITINYFAMP PSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEINDQVGEYFEECQVYRIDHYLG KETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDMIQNHL LQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPG YLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLF KESWQDLPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQITKLDLSYSETFNQTHLADA YERLLLETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQAGTWGPVASVAMI TRDGRSWNEFE >gi|299857059|gb|ADWS01000005.1| GENE 119 122175 - 123044 617 289 aa, chain + ## HITS:1 COG:ECs2563 KEGG:ns NR:ns ## COG: ECs2563 COG1737 # Protein_GI_number: 15831817 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 538 100.0 1e-153 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEANVSEPTVNRFCRSMDT RGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINR AVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVV LISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKQLLNLSDDR >gi|299857059|gb|ADWS01000005.1| GENE 120 123172 - 124614 1310 480 aa, chain + ## HITS:1 COG:pykA KEGG:ns NR:ns ## COG: pykA COG0469 # Protein_GI_number: 16129807 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Escherichia coli K12 # 1 480 1 480 480 883 99.0 0 MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAR LGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPAD VVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKA DIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDII LASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAE VMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDN VEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALY RGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTNTTRILTVE >gi|299857059|gb|ADWS01000005.1| GENE 121 124745 - 125716 780 323 aa, chain - ## HITS:1 COG:msbB KEGG:ns NR:ns ## COG: msbB COG1560 # Protein_GI_number: 16129808 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli K12 # 1 323 1 323 323 654 100.0 0 METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGK SSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAELAIRGPEKIQPRVDWQGL EIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRF GGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVC RARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWIL KLLKTRKPGEIQPYKRKDLYPIK >gi|299857059|gb|ADWS01000005.1| GENE 122 125836 - 127095 1239 419 aa, chain - ## HITS:1 COG:ECs2566 KEGG:ns NR:ns ## COG: ECs2566 COG0739 # Protein_GI_number: 15831820 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli O157:H7 # 1 419 1 419 419 823 100.0 0 MLGSLTVLTLAVAVWRPYVYHRDATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIP QDELDDKIAGEAGVHEYVVSTGDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSW TLTADGELQRLTWEVSRRETRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASAR NAGLTSAEVSAVIKAMQWQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKD YYAIRAEDGKFYDRNGTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAM PQGTPVLSVGDGEVVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIA LSGNTGRSTGPHLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD >gi|299857059|gb|ADWS01000005.1| GENE 123 127174 - 128121 468 315 aa, chain - ## HITS:1 COG:ECs2567 KEGG:ns NR:ns ## COG: ECs2567 COG4531 # Protein_GI_number: 15831821 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Zn2+ transport system, periplasmic component/surface adhesin # Organism: Escherichia coli O157:H7 # 1 315 14 328 328 608 99.0 1e-174 MIGRIMLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIADGVTETEVLLPD GASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQLEDVKPLLM KSIHGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDA NLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGA QRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTLDPLGTNIKLGKTSYSEF LSQLANQYASCLKGD >gi|299857059|gb|ADWS01000005.1| GENE 124 128185 - 128940 219 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 202 1 212 305 89 29 2e-16 MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGV IKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQAGHLINAPMQK LSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHD LHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFGPRGAEQLGIYRHHHNHRHDLQG RIVLRRGNDRS >gi|299857059|gb|ADWS01000005.1| GENE 125 128937 - 129722 900 261 aa, chain + ## HITS:1 COG:ECs2569 KEGG:ns NR:ns ## COG: ECs2569 COG1108 # Protein_GI_number: 15831823 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 261 1 261 261 395 98.0 1e-110 MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAV IAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLL AVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFVDGVKLQRVKLLLMLVTALTI GVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAFYDTPAG PSVVLCAALLFILSMMKKQAS >gi|299857059|gb|ADWS01000005.1| GENE 126 129869 - 130879 1048 336 aa, chain - ## HITS:1 COG:ECs2570 KEGG:ns NR:ns ## COG: ECs2570 COG2255 # Protein_GI_number: 15831824 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Escherichia coli O157:H7 # 1 336 1 336 336 644 100.0 0 MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLI FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR LEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG TISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV LEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPEMP >gi|299857059|gb|ADWS01000005.1| GENE 127 130888 - 131499 619 203 aa, chain - ## HITS:1 COG:ECs2571 KEGG:ns NR:ns ## COG: ECs2571 COG0632 # Protein_GI_number: 15831825 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Escherichia coli O157:H7 # 1 203 1 203 203 378 99.0 1e-105 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPTTDDAEQEAVAALVALGYKPQEASRM VSKIARPDASSETLIREALRAAL >gi|299857059|gb|ADWS01000005.1| GENE 128 131774 - 132376 281 200 aa, chain + ## HITS:1 COG:no KEGG:ECO111_2384 NR:ns ## KEGG: ECO111_2384 # Name: yebB # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 200 1 200 200 417 99.0 1e-115 MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLST ITTLSRFIKRSANQRYAIKRLDAGLTEQQKQRIVVQVPSRLRKLYHTGFKYESSRQFCSK FVFDIYKEALCIPVGEIETFGQLLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPG LVLIHAEGVETPQPELTEAV >gi|299857059|gb|ADWS01000005.1| GENE 129 132378 - 132899 525 173 aa, chain - ## HITS:1 COG:ECs2573 KEGG:ns NR:ns ## COG: ECs2573 COG0817 # Protein_GI_number: 15831827 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 302 100.0 2e-82 MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQ PDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKS QVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR >gi|299857059|gb|ADWS01000005.1| GENE 130 132934 - 133674 999 246 aa, chain - ## HITS:1 COG:ECs2574 KEGG:ns NR:ns ## COG: ECs2574 COG0217 # Protein_GI_number: 15831828 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 444 99.0 1e-125 MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNN MTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKC GGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMG KVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISD EVAATL >gi|299857059|gb|ADWS01000005.1| GENE 131 133703 - 134212 369 169 aa, chain - ## HITS:1 COG:ECs2575 KEGG:ns NR:ns ## COG: ECs2575 COG0494 # Protein_GI_number: 15831829 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 20 169 1 150 150 290 98.0 6e-79 MSIDNYVNGMSEGSQRRGSVKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTG SVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVMRNTES WFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA >gi|299857059|gb|ADWS01000005.1| GENE 132 134273 - 136045 2212 590 aa, chain - ## HITS:1 COG:aspS KEGG:ns NR:ns ## COG: aspS COG0173 # Protein_GI_number: 16129819 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 590 1 590 590 1197 99.0 0 MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLA SELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLDSNHVNTEEA RLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPS RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT APQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLK SVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKG LEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLT DESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVING YEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTM LLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAENN >gi|299857059|gb|ADWS01000005.1| GENE 133 136355 - 136921 506 188 aa, chain + ## HITS:1 COG:ECs2577 KEGG:ns NR:ns ## COG: ECs2577 COG1335 # Protein_GI_number: 15831831 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 188 12 199 199 374 99.0 1e-104 MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSA DYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRG IDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRS VEEILHAL >gi|299857059|gb|ADWS01000005.1| GENE 134 136918 - 137736 387 272 aa, chain + ## HITS:1 COG:yecE KEGG:ns NR:ns ## COG: yecE COG1801 # Protein_GI_number: 16129821 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 272 1 272 272 542 100.0 1e-154 MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRF CFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDS LPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVILDSRPVHAARPHSEAIRDAQR KKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQ APELVHTLWEDLRKTLPEIGAVPAIPQQSSLF >gi|299857059|gb|ADWS01000005.1| GENE 135 137789 - 138184 454 131 aa, chain + ## HITS:1 COG:ECs2579 KEGG:ns NR:ns ## COG: ECs2579 COG3788 # Protein_GI_number: 15831833 # Func_class: R General function prediction only # Function: Uncharacterized relative of glutathione S-transferase, MAPEG superfamily # Organism: Escherichia coli O157:H7 # 1 131 11 141 141 227 99.0 4e-60 MVSALYAVLSALLLMKFSFDVVRLRLQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIVL MLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW YMPWELVFSLR >gi|299857059|gb|ADWS01000005.1| GENE 136 138225 - 138968 832 247 aa, chain + ## HITS:1 COG:ECs2580 KEGG:ns NR:ns ## COG: ECs2580 COG0500 # Protein_GI_number: 15831834 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 514 100.0 1e-146 MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQV YDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD IAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNM HHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVA LKAEDAA >gi|299857059|gb|ADWS01000005.1| GENE 137 138965 - 139936 939 323 aa, chain + ## HITS:1 COG:ECs2581 KEGG:ns NR:ns ## COG: ECs2581 COG0500 # Protein_GI_number: 15831835 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 665 99.0 0 MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLL HSVTAESEEPLSTGQIKRIETLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSD LTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLG IEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPG DRYAQMRNVYFIPSALALKNWLKKCGFVDIRIVDVCVTTTEEQRRTEWMVTESLSDFLDP HDPSKTVEGYPAPKRAVLIARKP >gi|299857059|gb|ADWS01000005.1| GENE 138 140130 - 141110 797 326 aa, chain - ## HITS:1 COG:NMB1750 KEGG:ns NR:ns ## COG: NMB1750 COG3547 # Protein_GI_number: 15677594 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 7 321 2 315 316 208 38.0 1e-53 MEHELHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELVSWLKGHKIDHAHICIE ATGTYMEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDTVDARMLAEFCRQKRPAA WEAPHPLERALRALVVRHQALTDMHTQELNRTETAREVQRPSIDAHLLWLEAELKRLEKQ IKDLTDDDPDMKHRRKLLESIPGIGEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYE SGSSVRGASRMSKAGHVSLRRALYMPAMVATSKTEWGRAFCDRLAANGKKGKVILGAMMR KLAQVAYGVLKSGVPFDASRHNPVAA >gi|299857059|gb|ADWS01000005.1| GENE 139 141174 - 141374 109 66 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0834 NR:ns ## KEGG: ECIAI1_0834 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 66 1 66 66 111 100.0 7e-24 MPGYARHQADEQTQNCLMRYAYQALYYPSSAEKIGQFSLPAVRMPYRALGSNLLRRFMQR TAFLPK >gi|299857059|gb|ADWS01000005.1| GENE 140 141381 - 142745 1434 454 aa, chain - ## HITS:1 COG:rhlE KEGG:ns NR:ns ## COG: rhlE COG0513 # Protein_GI_number: 16128765 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli K12 # 1 442 1 442 454 778 100.0 0 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ >gi|299857059|gb|ADWS01000005.1| GENE 141 143120 - 143386 469 88 aa, chain - ## HITS:1 COG:ECs1668 KEGG:ns NR:ns ## COG: ECs1668 COG0851 # Protein_GI_number: 15830922 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 148 100.0 2e-36 MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEM VTVQLEQKDGDISILELNVTLPEAEELK >gi|299857059|gb|ADWS01000005.1| GENE 142 143390 - 144202 797 270 aa, chain - ## HITS:1 COG:ECs1669 KEGG:ns NR:ns ## COG: ECs1669 COG2894 # Protein_GI_number: 15830923 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Escherichia coli O157:H7 # 1 270 1 270 270 506 100.0 1e-143 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDF VNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCD SPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLL TRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYA DTVERLLGEERPFRFIEEEKKGFLKRLFGG >gi|299857059|gb|ADWS01000005.1| GENE 143 144226 - 144921 373 231 aa, chain - ## HITS:1 COG:minC KEGG:ns NR:ns ## COG: minC COG0850 # Protein_GI_number: 16129139 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Escherichia coli K12 # 1 231 1 231 231 440 99.0 1e-123 MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLKHAPVVLNVSALEDPVN WSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGKEKAPRPAPAPQAPAQNTT PVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVYGMMRGRALAGASGD RETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARLQLVENALTVQPLN >gi|299857059|gb|ADWS01000005.1| GENE 144 145447 - 145809 109 120 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1278 NR:ns ## KEGG: ECO103_1278 # Name: ycgJ # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 120 3 122 122 244 100.0 9e-64 MMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLGEK AAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVDGKRSGKINQITTKMLFMCRE >gi|299857059|gb|ADWS01000005.1| GENE 145 145929 - 146330 330 133 aa, chain - ## HITS:1 COG:no KEGG:ECBD_2444 NR:ns ## KEGG: ECBD_2444 # Name: not_defined # Def: peptidase domain protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 133 1 133 133 233 98.0 1e-60 MKIKSISKAVLLLALLTSTSFAAGKNVNVEFSKGHSSAQYSGEIKGYDYDTYTFYAKKGQ KVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRVLQTRNDARK NKTKKYNVDIQIK >gi|299857059|gb|ADWS01000005.1| GENE 146 146572 - 146865 311 97 aa, chain + ## HITS:1 COG:ECs1674 KEGG:ns NR:ns ## COG: ECs1674 COG3100 # Protein_GI_number: 15830928 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 97 12 108 108 174 98.0 4e-44 MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMILPLDGRKKLVNADIEKV KLALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK >gi|299857059|gb|ADWS01000005.1| GENE 147 146937 - 147596 647 219 aa, chain + ## HITS:1 COG:ECs1675 KEGG:ns NR:ns ## COG: ECs1675 COG0179 # Protein_GI_number: 15830929 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 447 100.0 1e-125 MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLFIKPETALCDLRQPLAI PSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDLTLRDVQGKMKKAGQPWEK AKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEQRQQGTTADMIHKIVPLIAYMSKFF TLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRVL >gi|299857059|gb|ADWS01000005.1| GENE 148 147688 - 148134 473 148 aa, chain + ## HITS:1 COG:ECs1676 KEGG:ns NR:ns ## COG: ECs1676 COG2983 # Protein_GI_number: 15830930 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 148 11 158 158 301 100.0 2e-82 MSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQC RNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDLPAWHPLLTGSKAAMHGER ISVRHIAVKESEVIDWQDHILNKPDWAQ >gi|299857059|gb|ADWS01000005.1| GENE 149 148341 - 148601 178 86 aa, chain - ## HITS:1 COG:no KEGG:JW5181 NR:ns ## KEGG: JW5181 # Name: hlyE # Def: hemolysin E # Organism: E.coli_J # Pathway: not_defined # 1 86 218 303 303 150 98.0 9e-36 MQNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTETETTRFYVDYDDLMLSLLKEA AKKMINTCNEYQKRHGKKTLFEVPEV >gi|299857059|gb|ADWS01000005.1| GENE 150 148742 - 149251 416 169 aa, chain - ## HITS:1 COG:no KEGG:ECSE_1230 NR:ns ## KEGG: ECSE_1230 # Name: hlyE # Def: hemolysin E # Organism: E.coli_SE11 # Pathway: not_defined # 1 169 1 169 169 288 99.0 4e-77 MTEIVADKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDEIIKELSRFKQEYSQAASV LVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYIFLFDEYNEKKASAQKDILIKVL DDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFSEKSSFSSHR >gi|299857059|gb|ADWS01000005.1| GENE 151 149624 - 150043 296 139 aa, chain + ## HITS:1 COG:ECs1678 KEGG:ns NR:ns ## COG: ECs1678 COG1974 # Protein_GI_number: 15830932 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 1 139 1 139 139 257 100.0 5e-69 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS SEDTLDVFGVVIHVVKAMR >gi|299857059|gb|ADWS01000005.1| GENE 152 150043 - 151311 500 422 aa, chain + ## HITS:1 COG:umuC KEGG:ns NR:ns ## COG: umuC COG0389 # Protein_GI_number: 16129147 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 422 1 422 422 876 100.0 0 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR VK >gi|299857059|gb|ADWS01000005.1| GENE 153 151357 - 151887 629 176 aa, chain - ## HITS:1 COG:ECs1680 KEGG:ns NR:ns ## COG: ECs1680 COG1495 # Protein_GI_number: 15830934 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 329 99.0 2e-90 MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLCIYERCALFGVLGAALI GAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFATCDFMVRFPEWLPLDKWV PQVFVASGDCAERQWDFLGMEMPQWLLGIFIAYLIVAVLVVISQPFKAKKRDLFGR >gi|299857059|gb|ADWS01000005.1| GENE 154 152033 - 153574 1660 513 aa, chain - ## HITS:1 COG:ECs1681 KEGG:ns NR:ns ## COG: ECs1681 COG3067 # Protein_GI_number: 15830935 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 897 100.0 0 MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAGWLLVAEFIFTLAMALK CYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFMVAGIYFMKQLLLFIFTRL LLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRTEDTDLQD DSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGWHFGDFFL RMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKVREVLQQFDDQSRHQRTRQDKIRLI VQAIIGVWLVTALALHLAEVGLIGLSVIILATSLTGVTDEHAIGKAFTESLPFTALLTVF FSVVAVIIDQQLFSPIIQFVLQASEHAQLSLFYIFNGLLSSISDNVFVGTIYINEAKAAM ESGAITLKQYELLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVWMALP YTLVLTLVGLLCVEFTLAPVTEWFMQMGWIATL >gi|299857059|gb|ADWS01000005.1| GENE 155 153795 - 154448 704 217 aa, chain + ## HITS:1 COG:ECs1682 KEGG:ns NR:ns ## COG: ECs1682 COG2186 # Protein_GI_number: 15830936 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 204 1 204 239 417 100.0 1e-117 MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGW LTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQH PDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYF ANPEARSLALGFYHKLSALCSEGASRSGVRNSASLWA >gi|299857059|gb|ADWS01000005.1| GENE 156 154567 - 156099 1482 510 aa, chain - ## HITS:1 COG:ycgB KEGG:ns NR:ns ## COG: ycgB COG2719 # Protein_GI_number: 16129151 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 510 1 510 510 1038 100.0 0 MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAY SSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM AHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALM NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQ ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE GKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWF PDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEE GYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR LWGFDVMLEQQNEDGSIELLERCPPRMGNL >gi|299857059|gb|ADWS01000005.1| GENE 157 156429 - 157727 1303 432 aa, chain + ## HITS:1 COG:ECs1684 KEGG:ns NR:ns ## COG: ECs1684 COG0665 # Protein_GI_number: 15830938 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 893 100.0 0 MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANAGQISPGYAAPWAAPGV PLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLK ALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDAGVPYQLLESSRLAEVEPALA EVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQIYGVKCG DEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIA ITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQATFWTGLRPMTPD GTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQLLSDLLSGRTPAIPYEDLSVARYSRGFT PSRPGHLHGAHS >gi|299857059|gb|ADWS01000005.1| GENE 158 157737 - 158807 902 356 aa, chain + ## HITS:1 COG:ZdadX KEGG:ns NR:ns ## COG: ZdadX COG0787 # Protein_GI_number: 15801412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli O157:H7 EDL933 # 1 356 1 356 356 710 99.0 0 MTRPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSALGATDGFALLN LEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDI YLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARIEQAA EGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEII GVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGAVS MDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVPVVTV >gi|299857059|gb|ADWS01000005.1| GENE 159 158910 - 159059 70 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|188493462|ref|ZP_03000732.1| ## NR: gi|188493462|ref|ZP_03000732.1| hypothetical protein Ec53638_4549 [Escherichia coli 53638] # 8 49 1 42 42 76 100.0 4e-13 MIVSIKRMDTISPEPELTAQAFYIKRLRFIVDSNSTSDKSRFTLDGACT >gi|299857059|gb|ADWS01000005.1| GENE 160 159193 - 160929 1686 578 aa, chain - ## HITS:1 COG:STM1801 KEGG:ns NR:ns ## COG: STM1801 COG3263 # Protein_GI_number: 16765142 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Salmonella typhimurium LT2 # 1 577 1 577 577 962 92.0 0 MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPF AYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLI EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQQHE SSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFALTTA LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAI PALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLEN ARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQ LSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALG KLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAA PVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES >gi|299857059|gb|ADWS01000005.1| GENE 161 161024 - 161938 746 304 aa, chain - ## HITS:1 COG:ldcA KEGG:ns NR:ns ## COG: ldcA COG1619 # Protein_GI_number: 16129155 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Escherichia coli K12 # 1 304 1 304 304 616 98.0 1e-176 MSLFHLIAPSGYCIKQHAALRGIHRLTDEGHQVNNVEVIARRCERFAGTETERLEDLNSL ARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAQGN VITFSGPMLVANFGADELNAFTEHHFWLALRNKTFTIEWQGEGPTCQTEGTLWGGNLAML ISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPND YDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHP VLKM >gi|299857059|gb|ADWS01000005.1| GENE 162 162038 - 162649 548 203 aa, chain + ## HITS:1 COG:ECs1687 KEGG:ns NR:ns ## COG: ECs1687 COG0741 # Protein_GI_number: 15830942 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli O157:H7 # 1 203 39 241 241 405 99.0 1e-113 MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAI IAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAY LNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLDHV ARNHPAPQAPRYIYKLEQALDAM >gi|299857059|gb|ADWS01000005.1| GENE 163 162651 - 163385 576 244 aa, chain - ## HITS:1 COG:ycgR KEGG:ns NR:ns ## COG: ycgR COG5581 # Protein_GI_number: 16129157 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted glycosyltransferase # Organism: Escherichia coli K12 # 1 244 1 244 244 481 99.0 1e-136 MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKILAITPDKLVLDFGSQAE DNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFITVPPPTLWFVQRRRYFRIS APLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKPAELQEGMRFAQIEVNMGQWG VFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSPTVERQLQRIIFSLEREAREKAD KVRD >gi|299857059|gb|ADWS01000005.1| GENE 164 163586 - 163840 262 84 aa, chain + ## HITS:1 COG:ymgE KEGG:ns NR:ns ## COG: ymgE COG2261 # Protein_GI_number: 16129158 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 84 1 84 84 105 98.0 3e-23 MGIIAWIIFGLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGGWLATMFGIGGSISGFN LHSFLVAVVGAILVLGIFRLLRRE >gi|299857059|gb|ADWS01000005.1| GENE 165 164162 - 164458 148 98 aa, chain + ## HITS:1 COG:no KEGG:B21_01181 NR:ns ## KEGG: B21_01181 # Name: ycgY # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 98 49 146 146 200 100.0 1e-50 MLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALYSQRRRK SPGDESETLTRRNDAIFGNHVWQTFAQYFPPGLEKPSV >gi|299857059|gb|ADWS01000005.1| GENE 166 164537 - 166234 1691 565 aa, chain - ## HITS:1 COG:treA KEGG:ns NR:ns ## COG: treA COG1626 # Protein_GI_number: 16129160 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Escherichia coli K12 # 1 565 1 565 565 1103 100.0 0 MKSPAPSRPQKMALIPACIFLCFAALSVQAEETPVTPQPPDILLGPLFNDVQNAKLFPDQ KTFADAVPNSDPLMILADYRMQQNQSGFDLRHFVNVNFTLPKEGEKYVPPEGQSLREHID GLWPVLTRSTENTEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADM VANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGDAALKQYLPQMQKEYAY WMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIY RDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAM ANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAKDRAN KMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMDISWHF LTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCD NVPATRPTVKSATTQPSTKEAQPTP >gi|299857059|gb|ADWS01000005.1| GENE 167 166554 - 167972 1218 472 aa, chain - ## HITS:1 COG:ycgC_3 KEGG:ns NR:ns ## COG: ycgC_3 COG1080 # Protein_GI_number: 16129161 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli K12 # 258 472 1 215 215 417 100.0 1e-116 MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVA DADHVLVMMDMGSALLSAETALELLAPKIAAKVRLCAAPLVEGTLAATVSAASGADIDKV IFDAMHALEAKREQLGLPSSDTKISDTCPAYDEEARSLAVVIKNRNGLHVRPASRLVYTL STFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFG ETEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLT AKAEASGLDDIAAIFSGHHTLLDDPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQL DDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGI CLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG >gi|299857059|gb|ADWS01000005.1| GENE 168 167983 - 168615 593 210 aa, chain - ## HITS:1 COG:ECs1704 KEGG:ns NR:ns ## COG: ECs1704 COG2376 # Protein_GI_number: 15830958 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli O157:H7 # 1 210 1 210 210 393 97.0 1e-109 MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKD IGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLTLEELYQMFRDGADGVISR GKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASRIAESAAQSTITMQARKGRAS YLGERSIGHQDPGATSVMFMMQMLALAAKE >gi|299857059|gb|ADWS01000005.1| GENE 169 168626 - 169696 1008 356 aa, chain - ## HITS:1 COG:ycgT KEGG:ns NR:ns ## COG: ycgT COG2376 # Protein_GI_number: 16129163 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli K12 # 1 356 11 366 366 725 99.0 0 MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAGKVALLSGGGSGHEPMH CGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELL HDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLDACAELGRKL NNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRSFSSLDQTVDEMFD TLLENGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRL TTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWGK >gi|299857059|gb|ADWS01000005.1| GENE 170 169924 - 171843 1441 639 aa, chain + ## HITS:1 COG:ycgU KEGG:ns NR:ns ## COG: ycgU COG3284 # Protein_GI_number: 16129164 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; K Transcription # Function: Transcriptional activator of acetoin/glycerol metabolism # Organism: Escherichia coli K12 # 1 639 4 642 642 1264 99.0 0 MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLGQAA LEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGFHDGTYCAEGIIGTCALSL AAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPLTLA IAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLRLDA TASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFESQHQFIDAVITLKPIIETQGTSFI LLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVG KALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFIGGDRTDNENGRLSRLELAHGGTL FLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTTADLAMLVEQNRFSRQ LYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGND FELYSVIENLALSSDNGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAA QVTGGRIQEMSALLGIGRTTLWRKMKQHGIDAGQFKRRV >gi|299857059|gb|ADWS01000005.1| GENE 171 171943 - 174828 1587 961 aa, chain - ## HITS:1 COG:ycgV_2 KEGG:ns NR:ns ## COG: ycgV_2 COG3468 # Protein_GI_number: 16129165 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 543 961 1 413 413 669 97.0 0 MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLLIAADTGSQYGTNITIN DGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLT ANRLTVDVVSQTSAIGINLIGDYTHADLGTGSTIKSNDDGIIIGHSSTLTATQFTIENSN GIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM GINVQKNSVVDLGTNSTIKTNGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTI GADSHISSAQGGGLVTSGSDATINFSGTAAQRNSIFSGGSYGASAQTATAVVNMQNTDIT VDRNGSLALGLWALSGGRITGDSLAITGAAGARGIYAMTNSQIDLTSDLVIDMSTPDQMA IATQHDDGYAASRINASGRMLINGSVLSKGGLINLDMHPGSVWTGSSLSDNVNGGKLDVA MNNSVWNVTSNSNLDTLALSHSTVDFASHGSTAGTFATLNVENLSGNSTFIMRADVVGEG NGVNNKGDLLNISGSSAGNHVLAIRNQGSEATTGNEVLTVVKTTDGAASFSASSQVELGG YLYDVRKNGTNWELYASGTVPEPTPNPEPTPAPAQPPIVNPDPTPEPDPTPNPTPTPKPT TTADAGGNYLNVGYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGF DMGYSGIQFGGDKRLSDVMPLYVGLYIGSTHASPDYSGGDGTARSDYMGMYASYMAQNGF YSDLVIKASRQKNSFHVLDSQNNGVNANGTANGMSISLEAGQRFNLSPTGYGFYIEPQTQ LTYSHQNEMAMKASNGLNIHLNHYESLLGRASMILGYDITAGNSQLNVYVKTGAIREFSG DTEYLLNNSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQGNLFDQKQVNGGYRFS F >gi|299857059|gb|ADWS01000005.1| GENE 172 175669 - 176760 1323 363 aa, chain - ## HITS:1 COG:ECs1708 KEGG:ns NR:ns ## COG: ECs1708 COG0012 # Protein_GI_number: 15830962 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Escherichia coli O157:H7 # 1 363 1 363 363 721 100.0 0 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL FNV >gi|299857059|gb|ADWS01000005.1| GENE 173 176877 - 177092 112 71 aa, chain - ## HITS:1 COG:ECs1709 KEGG:ns NR:ns ## COG: ECs1709 COG0193 # Protein_GI_number: 15830963 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Escherichia coli O157:H7 # 1 71 124 194 194 153 98.0 9e-38 MGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTK ATNRLHAFKAQ >gi|299857059|gb|ADWS01000005.1| GENE 174 177094 - 177462 273 122 aa, chain - ## HITS:1 COG:ECs1709 KEGG:ns NR:ns ## COG: ECs1709 COG0193 # Protein_GI_number: 15830963 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Escherichia coli O157:H7 # 1 107 1 107 194 218 100.0 3e-57 MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVR LLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGRWPWWSQWTERH HQ >gi|299857059|gb|ADWS01000005.1| GENE 175 177740 - 178018 274 92 aa, chain + ## HITS:1 COG:no KEGG:LF82_2742 NR:ns ## KEGG: LF82_2742 # Name: ychH # Def: uncharacterized protein YchH # Organism: E.coli_LF82 # Pathway: not_defined # 1 92 1 92 92 152 100.0 3e-36 MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAG ARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS >gi|299857059|gb|ADWS01000005.1| GENE 176 178073 - 179725 1876 550 aa, chain - ## HITS:1 COG:ECs1711 KEGG:ns NR:ns ## COG: ECs1711 COG0659 # Protein_GI_number: 15830965 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Escherichia coli O157:H7 # 1 550 1 550 550 919 100.0 0 MPFRALIDACWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIGSGVAPQYGLYTAAVAG IVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLLSGIFLILMGLARFGRLIE YIPVSVTLGFTSGIGITIGTMQIKDFLGLQMAHVPEHYLQKVGALFMALPTINVGDAAIG IVTLGILVFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGHVATIGSQFHYVLADGSQGNG IPQLLPQLVLPWDLPNSEFTLTWDSIRTLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHK ANSELVGQGLGNIIAPFFGGITATAAIARSAANVRAGATSPISAVIHSILVILALLVLAP LLSWLPLSAMAALLLMVAWNMSEAHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISV GIVLASLLFMRRIARMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRI VILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFF PNRRAAMADL >gi|299857059|gb|ADWS01000005.1| GENE 177 179877 - 180890 990 337 aa, chain - ## HITS:1 COG:ECs1712 KEGG:ns NR:ns ## COG: ECs1712 COG0462 # Protein_GI_number: 15830966 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Escherichia coli O157:H7 # 23 337 1 315 315 595 99.0 1e-170 MPGPHSFRQILSTNGRMPEVLLVPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDG EVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQD RRVRSARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQ LNLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLS DEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH >gi|299857059|gb|ADWS01000005.1| GENE 178 180975 - 181826 514 283 aa, chain - ## HITS:1 COG:ECs1713 KEGG:ns NR:ns ## COG: ECs1713 COG1947 # Protein_GI_number: 15830967 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 562 99.0 1e-160 MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGV EHEDNLIVRAARLLIKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNH LWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIP TPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGT GACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRAML >gi|299857059|gb|ADWS01000005.1| GENE 179 181826 - 182449 562 207 aa, chain - ## HITS:1 COG:ECs1714 KEGG:ns NR:ns ## COG: ECs1714 COG3017 # Protein_GI_number: 15830968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 405 100.0 1e-113 MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQDVRNLNQYQTRGAFAY ISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGNVQLVDNKGQRYTADDAEE MIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEITYSQNGKNWKVVYGGYDTKT QPAMPANMELTDGGQRIKLKMDNWIVK >gi|299857059|gb|ADWS01000005.1| GENE 180 182663 - 183919 1331 418 aa, chain + ## HITS:1 COG:ECs1715 KEGG:ns NR:ns ## COG: ECs1715 COG0373 # Protein_GI_number: 15830969 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Escherichia coli O157:H7 # 1 418 1 418 418 730 99.0 0 MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGGVVLSTCNRTELYLSVE EQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMRVASGLDSLVLGEPQILGQ VKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIFESL STVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVGAEVIALSEIDERL READIIISSTASPLPIIGKGMVERALKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSV DDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAWLRAQSASETIREYRSQAEHVRDELT AKALAALEQGGDAQAIMQDLAWKLTNRLIHAPTKSLQQAARDGDNERLNILRDSLGLE >gi|299857059|gb|ADWS01000005.1| GENE 181 183961 - 185043 1204 360 aa, chain + ## HITS:1 COG:ECs1716 KEGG:ns NR:ns ## COG: ECs1716 COG0216 # Protein_GI_number: 15830970 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Escherichia coli O157:H7 # 1 360 1 360 360 632 100.0 0 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS GDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSEQE >gi|299857059|gb|ADWS01000005.1| GENE 182 185043 - 185876 476 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 7 274 23 289 294 187 40 3e-46 MEYQYWLREAISQLQASESPRRDAEILLEYVTGRGRTFILAFGETQLTDEQCQQLDALLT RRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGT GAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMI VSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW QQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYYQ >gi|299857059|gb|ADWS01000005.1| GENE 183 185873 - 186265 377 130 aa, chain + ## HITS:1 COG:ECs1718 KEGG:ns NR:ns ## COG: ECs1718 COG3094 # Protein_GI_number: 15830972 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 130 1 130 130 207 99.0 5e-54 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTVLLLSGIALM AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK LATTKVPLLG >gi|299857059|gb|ADWS01000005.1| GENE 184 186269 - 187078 742 269 aa, chain + ## HITS:1 COG:ECs1719 KEGG:ns NR:ns ## COG: ECs1719 COG2912 # Protein_GI_number: 15830973 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 521 100.0 1e-148 MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLE KLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVI FPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVI RKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSY FVEQCPEDPISEMIRAQINNIAHKHIVLH >gi|299857059|gb|ADWS01000005.1| GENE 185 187114 - 187968 1079 284 aa, chain + ## HITS:1 COG:ECs1720 KEGG:ns NR:ns ## COG: ECs1720 COG2877 # Protein_GI_number: 15830974 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 567 99.0 1e-162 MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLAR QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEKVILCDRGANFGYDNLVVD MLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEA HPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKGFEELDTSK >gi|299857059|gb|ADWS01000005.1| GENE 186 188116 - 188250 120 44 aa, chain - ## HITS:1 COG:no KEGG:SBO_1851 NR:ns ## KEGG: SBO_1851 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 44 48 91 91 86 100.0 3e-16 MLSLQQGGYMTLAQFAMIFWHDLAAPILAGIITAAIVGWWRNRK >gi|299857059|gb|ADWS01000005.1| GENE 187 188652 - 188786 118 44 aa, chain - ## HITS:1 COG:no KEGG:SBO_1851 NR:ns ## KEGG: SBO_1851 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 44 48 91 91 82 93.0 5e-15 MLSLQQGGYMTLAQFTMTFWHDLAAPILAGIITAAIVSWWRNRK >gi|299857059|gb|ADWS01000005.1| GENE 188 189164 - 190264 1092 366 aa, chain - ## HITS:1 COG:STM1771 KEGG:ns NR:ns ## COG: STM1771 COG0387 # Protein_GI_number: 16765112 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 1 366 1 366 366 577 93.0 1e-164 MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSNQTLPVVIAINLLALIGILSSAFSVVRH ADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVG FSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPAANFSTGQALLVALISAA MYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAHSSVWHAIWLIIHLIAVIAVTKM NASPLETLLDSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATIS LTVPVVTLIAFMTGNELQFALGAPEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAY LMTIFA >gi|299857059|gb|ADWS01000005.1| GENE 189 190534 - 190764 289 76 aa, chain + ## HITS:1 COG:ECs1722 KEGG:ns NR:ns ## COG: ECs1722 COG4572 # Protein_GI_number: 15830976 # Func_class: R General function prediction only # Function: Putative cation transport regulator # Organism: Escherichia coli O157:H7 # 1 76 1 76 76 98 98.0 2e-21 MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKDDRRDDASREETAHKVAWAAV KHEYAKGDDDKWHKKS >gi|299857059|gb|ADWS01000005.1| GENE 190 190943 - 191494 406 183 aa, chain + ## HITS:1 COG:chaC KEGG:ns NR:ns ## COG: chaC COG3703 # Protein_GI_number: 16129181 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in cation transport # Organism: Escherichia coli K12 # 1 183 15 197 238 374 99.0 1e-104 MNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESC TGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKRE MITGCYLPTWCQLDLDDGCTVNAIVFIMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQ YLF >gi|299857059|gb|ADWS01000005.1| GENE 191 191661 - 192014 371 117 aa, chain - ## HITS:1 COG:ECs1724 KEGG:ns NR:ns ## COG: ECs1724 COG1553 # Protein_GI_number: 15830978 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Escherichia coli O157:H7 # 1 117 1 117 117 224 100.0 2e-59 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYN IQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF >gi|299857059|gb|ADWS01000005.1| GENE 192 192241 - 193593 788 450 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_1703 NR:ns ## KEGG: ECH74115_1703 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 450 27 476 476 866 99.0 0 MLVAGGTANAQSTFEQKAANPFDNNNDGLPDLGMAPENHDGEKHFAEIVKDFGETSMNDN GLDTGEQAKAFALGKVRDALSQQVNQHVESWLSPWGNASVDVKVDNEGHFTGSRGSWFVP LQDNDRYLTWSQLGLTQQDDGLVSNVGVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGA EAWGEYLRLSANFYQPFAAWHEQTATQEQRMARGYDLTARMRMPFYQHLNTSVSVEQYFG DRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPL KKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKL QIRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDN QGQRVSSNEITLTLVEPFDALSNDELRWEP >gi|299857059|gb|ADWS01000005.1| GENE 193 193594 - 194244 860 216 aa, chain - ## HITS:1 COG:ECs1726 KEGG:ns NR:ns ## COG: ECs1726 COG2197 # Protein_GI_number: 15830980 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 346 100.0 2e-95 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF >gi|299857059|gb|ADWS01000005.1| GENE 194 194237 - 196033 1349 598 aa, chain - ## HITS:1 COG:ECs1727 KEGG:ns NR:ns ## COG: ECs1727 COG3850 # Protein_GI_number: 15830981 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Escherichia coli O157:H7 # 1 598 1 598 598 1131 99.0 0 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG LEHKNQILSFLWQANRRLHSQAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE >gi|299857059|gb|ADWS01000005.1| GENE 195 196059 - 196277 123 72 aa, chain + ## HITS:1 COG:no KEGG:SSON_1954 NR:ns ## KEGG: SSON_1954 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 72 1 72 72 138 98.0 5e-32 MSNNLNECDDTFWNGSILGYWLKYTHTRKELLLICRVVSRFTSVRVGILQHCEKSHNFYE ITVLTMGNDKYQ >gi|299857059|gb|ADWS01000005.1| GENE 196 196372 - 197763 1143 463 aa, chain + ## HITS:1 COG:narK KEGG:ns NR:ns ## COG: narK COG2223 # Protein_GI_number: 16129186 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Escherichia coli K12 # 1 463 1 463 463 800 99.0 0 MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPCLLLAFCVWMLFSAVAV NLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGRRWTAFSTGILIIPCVWLG FAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPKQKQGGALGLNGGLGNMGVSV MQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWIWVPFLAIFTIAAWFGMNDLATS KASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQFPDVQILQYAFFGPFI GALARSAGGALSDRLGGTRVTLVNFILMAIFSGLLFLTLPTDGQGGSFMAFFAVFLALFL TAGLGSGSTFQMISVIFRKLTMDRVKAEGGSDERAMREAATDTAAALGFISAIGAIGGFF IPKAFGSSLALTGSPVGAMKVFLIFYIACVVITWTVYGRHSKK >gi|299857059|gb|ADWS01000005.1| GENE 197 198156 - 201899 4498 1247 aa, chain + ## HITS:1 COG:ECs1729 KEGG:ns NR:ns ## COG: ECs1729 COG5013 # Protein_GI_number: 15830983 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Escherichia coli O157:H7 # 1 1247 1 1247 1247 2596 99.0 0 MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD LVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSL LGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLA NYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMII VGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQ RPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAP QLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGS SGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTC LYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVG HLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERF TSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLA PETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEH VSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVMGQKSN DNPEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFN SNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIG GYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK >gi|299857059|gb|ADWS01000005.1| GENE 198 201896 - 203434 1840 512 aa, chain + ## HITS:1 COG:ECs1730 KEGG:ns NR:ns ## COG: ECs1730 COG1140 # Protein_GI_number: 15830984 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Escherichia coli O157:H7 # 1 512 1 512 512 1093 100.0 0 MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNVETKPGQGFPTDWENQE KYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDFDYQNLHTAPEGSKS QPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKNFDNIQKAMYSQFENTFMMYL PRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGK SEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIERAASTENEKDLYQRQLEVF LDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMAMEWKLALPLHPEYRTLPMVWYVPPLS PIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTKPVLRALKRMLAMRHYKRAET VDGKVDTRALEEVGLTEAQAQEMYRYLAIANYEDRFVVPSSHRELAREAFPEKNGCGFTF GDGCHGSDTKFNLFNSRRIDAIDVTSKTEPHP >gi|299857059|gb|ADWS01000005.1| GENE 199 203431 - 204141 884 236 aa, chain + ## HITS:1 COG:ECs1731 KEGG:ns NR:ns ## COG: ECs1731 COG2180 # Protein_GI_number: 15830985 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 426 98.0 1e-119 MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLSKEDAHALGIFLRDLTAMDPLDAQA QYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHGLQLNSRELPDHLPLYLEY LSQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVMFDLLLKLANTAIDSDKVAEKIAD EARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRRFAGAVAPQYLNITTGGQH >gi|299857059|gb|ADWS01000005.1| GENE 200 204141 - 204818 893 225 aa, chain + ## HITS:1 COG:ECs1732 KEGG:ns NR:ns ## COG: ECs1732 COG2181 # Protein_GI_number: 15830986 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 422 100.0 1e-118 MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGIL GIFVGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCLIGGVLLLKRRLFSPRVRA TTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGV AFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKYQLVRARH >gi|299857059|gb|ADWS01000005.1| GENE 201 205299 - 205448 63 49 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1528 NR:ns ## KEGG: ECUMN_1528 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 49 101 149 149 96 100.0 3e-19 MVVGEGFEPSKSMTADLQSAPFGRSGTPPRGNAFYWPAPLSGSGAHHIK >gi|299857059|gb|ADWS01000005.1| GENE 202 205544 - 206386 895 280 aa, chain - ## HITS:1 COG:purU KEGG:ns NR:ns ## COG: purU COG0788 # Protein_GI_number: 16129193 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate hydrolase # Organism: Escherichia coli K12 # 1 280 1 280 280 563 99.0 1e-161 MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFND STLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGN HDTLRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMRVLTPEFVAR FPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHT YTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNRTIIL >gi|299857059|gb|ADWS01000005.1| GENE 203 206436 - 206894 200 152 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90021194|ref|YP_527021.1| ribosomal protein L20 [Saccharophagus degradans 2-40] # 4 127 3 131 134 81 37 3e-14 MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAA ALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENG QWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ >gi|299857059|gb|ADWS01000005.1| GENE 204 206968 - 207912 406 314 aa, chain + ## HITS:1 COG:ECs1736 KEGG:ns NR:ns ## COG: ECs1736 COG1752 # Protein_GI_number: 15830990 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Escherichia coli O157:H7 # 1 314 1 314 314 634 100.0 0 MATIAFQGNLAGIMRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVG AAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEIENCSR RFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVNPIPISLT RALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLGSITTRRAVT APTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVE KKMDELLPLVRTNI >gi|299857059|gb|ADWS01000005.1| GENE 205 208004 - 209017 571 337 aa, chain + ## HITS:1 COG:STM1753_1 KEGG:ns NR:ns ## COG: STM1753_1 COG0784 # Protein_GI_number: 16765097 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Salmonella typhimurium LT2 # 1 134 1 134 134 251 92.0 2e-66 MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIA MPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMV FACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQELQPPVQQVISHCRVNYRQLVA ADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPE LGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVP LGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE >gi|299857059|gb|ADWS01000005.1| GENE 206 209219 - 210127 939 302 aa, chain + ## HITS:1 COG:ECs1738 KEGG:ns NR:ns ## COG: ECs1738 COG1210 # Protein_GI_number: 15830992 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 302 1 302 302 589 100.0 1e-168 MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLV THSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVL CAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGHSQIMVEPVADVTAYGV VDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQ LTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNTLGTEFKAWLEEEMGI KK >gi|299857059|gb|ADWS01000005.1| GENE 207 210271 - 210684 524 137 aa, chain - ## HITS:1 COG:ECs1739 KEGG:ns NR:ns ## COG: ECs1739 COG2916 # Protein_GI_number: 15830993 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 197 100.0 4e-51 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK KAMDEQGKSLDDFLIKQ >gi|299857059|gb|ADWS01000005.1| GENE 208 211289 - 211906 293 205 aa, chain + ## HITS:1 COG:ECs1740 KEGG:ns NR:ns ## COG: ECs1740 COG1435 # Protein_GI_number: 15830994 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 403 99.0 1e-112 MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSSAK LFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSEVVDQLDIPVLCYGLRTDF RGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQAGRPYNEGEQVVIGGNERYVS VCRKHYKEALQVGSLTAIQERHRHD >gi|299857059|gb|ADWS01000005.1| GENE 209 212188 - 212598 87 136 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1334 NR:ns ## KEGG: EC55989_1334 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 136 45 180 180 258 99.0 3e-68 MRLVALMNLGSHILLNAVTAPYRQSETVLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQ KGCNRHWLLPAWKNIASEMIELGNTASPGTIPKRLEHLRGALEVVFITKRPRPSRPRSVK ISKTRYPVKHSAAPLK >gi|299857059|gb|ADWS01000005.1| GENE 210 212899 - 213084 123 61 aa, chain - ## HITS:1 COG:no KEGG:ROD_08131 NR:ns ## KEGG: ROD_08131 # Name: not_defined # Def: ISCro3 transposase # Organism: C.rodentium # Pathway: not_defined # 1 60 1 60 445 125 95.0 5e-28 MPLLNDLLDFSDHPLMPPPSVQLFAEHLPTEWIQHCLTLSAHATVRRRRLPGDMVIWMVV Q >gi|299857059|gb|ADWS01000005.1| GENE 211 213208 - 215883 2825 891 aa, chain - ## HITS:1 COG:ECs1741_2 KEGG:ns NR:ns ## COG: ECs1741_2 COG1454 # Protein_GI_number: 15830995 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 448 872 1 425 444 860 100.0 0 MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMG IVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTA IFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNA LMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTF DNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQGKELKAVQDVILKNGALNAAIVGQP AYKIAELAGFSVPENTKILIGEVTVVDESEPFAHEKLSPTLAMYRAKDFEDAVEKAEKLV AMGGIGHTSCLYTDQDNQPARVSYFGQKMKTARILINTPASQGGIGDLYNFKLAPSLTLG CGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHK RALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSIVRKGAELANSFKPDVI IALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSG TGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAME AYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLG VCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIAD HLGLSAPGDRTAAKIEKLLAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQ CTGANPRYPLISELKQILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA >gi|299857059|gb|ADWS01000005.1| GENE 212 216360 - 217007 490 215 aa, chain + ## HITS:1 COG:ychE KEGG:ns NR:ns ## COG: ychE COG2095 # Protein_GI_number: 16129203 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Escherichia coli K12 # 1 215 1 215 215 377 100.0 1e-105 MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWI SLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGV VPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQ TGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN >gi|299857059|gb|ADWS01000005.1| GENE 213 217165 - 217326 146 53 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1310 NR:ns ## KEGG: ECS88_1310 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 12 53 63 104 104 76 100.0 2e-13 MSIFSDYSSSSEMHNNLTIDYYLALSSTKGSGITNIISIILQQAQDYDVAKIT >gi|299857059|gb|ADWS01000005.1| GENE 214 217745 - 219376 1890 543 aa, chain + ## HITS:1 COG:ECs1743 KEGG:ns NR:ns ## COG: ECs1743 COG4166 # Protein_GI_number: 15830997 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 543 1 543 543 1082 100.0 0 MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDPHKIEGV PESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHLRKDAKWSDGTPVTAQDFV YSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSEPVPY FYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPTYWNNA KTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPDEVHVDPYLCTYY YEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKAQGDMPAYGYTPPYTDGAKLTQPEWFG WSQEKRNEEAKKLLAEAGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNIGVNVKLVN QEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETL KVTDEAQRTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNTYTRNMYI VKH >gi|299857059|gb|ADWS01000005.1| GENE 215 219462 - 220382 840 306 aa, chain + ## HITS:1 COG:ECs1744 KEGG:ns NR:ns ## COG: ECs1744 COG0601 # Protein_GI_number: 15830998 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 549 100.0 1e-156 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIM TQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAA LKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVA LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAF VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI DPKIRY >gi|299857059|gb|ADWS01000005.1| GENE 216 220397 - 221305 881 302 aa, chain + ## HITS:1 COG:STM1744 KEGG:ns NR:ns ## COG: STM1744 COG1173 # Protein_GI_number: 16765088 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 302 1 302 302 509 96.0 1e-144 MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLIVLVLIALFVILAPMLS QFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVVVGT LYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA RIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNVLGVVVVYASLLVPSMILFESFL SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK DR >gi|299857059|gb|ADWS01000005.1| GENE 217 221317 - 222330 582 337 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 12 317 4 311 329 228 40 1e-58 MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGS GKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPY MRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIA MALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVL VMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCP FQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVEELL >gi|299857059|gb|ADWS01000005.1| GENE 218 222327 - 223331 851 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 329 1 325 329 332 51 9e-90 MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKMLKAVDGVTLRLYEGETLGVVGESG CGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTI GEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALI LEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL GHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSGCVF RTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL >gi|299857059|gb|ADWS01000005.1| GENE 219 223384 - 223713 448 109 aa, chain - ## HITS:1 COG:yciU KEGG:ns NR:ns ## COG: yciU COG3099 # Protein_GI_number: 16129209 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 109 27 135 135 201 100.0 2e-52 MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEH VDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE >gi|299857059|gb|ADWS01000005.1| GENE 220 223748 - 225208 1164 486 aa, chain - ## HITS:1 COG:cls KEGG:ns NR:ns ## COG: cls COG1502 # Protein_GI_number: 16129210 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli K12 # 1 486 1 486 486 978 100.0 0 MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGE LHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQ LQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLD SAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSM NMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPF EQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQR GVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTV NLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFY FFSPLL >gi|299857059|gb|ADWS01000005.1| GENE 221 225351 - 225524 73 57 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1347 NR:ns ## KEGG: EC55989_1347 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 57 38 94 94 83 100.0 3e-15 MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILNKQRNSLLFAIYNI >gi|299857059|gb|ADWS01000005.1| GENE 222 225579 - 226712 730 377 aa, chain - ## HITS:1 COG:ECs1750 KEGG:ns NR:ns ## COG: ECs1750 COG1226 # Protein_GI_number: 15831004 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Escherichia coli O157:H7 # 1 377 41 417 417 682 99.0 0 MSVNLLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIAL IYTLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALY LSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMTSI FGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDI KQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVK TVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLLNSGHGIFS DNDEQETKADSKESVQK >gi|299857059|gb|ADWS01000005.1| GENE 223 227132 - 227428 291 98 aa, chain - ## HITS:1 COG:ECs1751 KEGG:ns NR:ns ## COG: ECs1751 COG2350 # Protein_GI_number: 15831005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 98 33 130 130 188 98.0 2e-48 MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNDPGAAGFTGST VIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF >gi|299857059|gb|ADWS01000005.1| GENE 224 227652 - 228371 550 239 aa, chain + ## HITS:1 COG:ECs1752 KEGG:ns NR:ns ## COG: ECs1752 COG0810 # Protein_GI_number: 15831006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 281 99.0 7e-76 MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQA VQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDIKPVESR PASPFENTAPARPTSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKF DVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGTTEIQ >gi|299857059|gb|ADWS01000005.1| GENE 225 228411 - 228809 357 132 aa, chain - ## HITS:1 COG:yciA KEGG:ns NR:ns ## COG: yciA COG1607 # Protein_GI_number: 16129214 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Escherichia coli K12 # 1 132 1 132 132 264 100.0 3e-71 MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVE GMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAV DPEGKPRALPVE >gi|299857059|gb|ADWS01000005.1| GENE 226 228914 - 229453 534 179 aa, chain - ## HITS:1 COG:ECs1754 KEGG:ns NR:ns ## COG: ECs1754 COG2917 # Protein_GI_number: 15831008 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Escherichia coli O157:H7 # 1 179 1 179 179 287 99.0 6e-78 MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRFRKVEKMALITFVLVVV FGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQRMLGKELTLPQPVWLKLN LAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGIYIYRHMPQEDKS >gi|299857059|gb|ADWS01000005.1| GENE 227 229483 - 230226 558 247 aa, chain - ## HITS:1 COG:no KEGG:SSON_1911 NR:ns ## KEGG: SSON_1911 # Name: yciC # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 247 1 247 247 353 99.0 4e-96 MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPSDAQLAQLNDGVPVSGN SGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVILIIQLVSAGQRVSALRAIG ASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLALAPVMLVQDKMGIFASMRSSM RLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEIGAVLANTLSNLISAILLIYLFR LYMLIRQ >gi|299857059|gb|ADWS01000005.1| GENE 228 230667 - 231221 637 184 aa, chain + ## HITS:1 COG:ECs1756 KEGG:ns NR:ns ## COG: ECs1756 COG3047 # Protein_GI_number: 15831010 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Escherichia coli O157:H7 # 1 184 29 212 212 354 100.0 5e-98 MRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGT RATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLS LKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSA GYRF >gi|299857059|gb|ADWS01000005.1| GENE 229 231267 - 232397 471 376 aa, chain - ## HITS:1 COG:ECs1757 KEGG:ns NR:ns ## COG: ECs1757 COG0582 # Protein_GI_number: 15831011 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 376 1 376 376 766 100.0 0 MARPRKYKTDVPGLSPYFDKRNNKVYWRYRHPITGKNHGLGSIDQKLAETIAAEANSRLA RQQMEQMLSLQEKIISDTGGSSTVTIFLNNYRKIQQERYENGEIKLNTLKQKAAPLRVFD ERFGTRPLDAITVKDVVSVLEEYKARGHNRMGQIFRKVLIDVFREAQQTGDVPPGFNPAE SAKKPQVRISRQRLTFDEWMMIYNAAEKDGYFLQRGMLLALMTGQRLSDICKMQFSDIRD GYLHVEQQKTGTRIAIPLALRCDKLNLTLDDVVSSCRDCVLSPWLLHHHHAKGTAKRGGM VKPATLTVAFKKARDSVDYNWRANGTPPSFHEQRSLSERLFREQGVDTKILLGHSNQKMT DIYNDARGKEWKKLVI >gi|299857059|gb|ADWS01000005.1| GENE 230 232688 - 235159 1451 823 aa, chain - ## HITS:1 COG:no KEGG:ECED1_0996 NR:ns ## KEGG: ECED1_0996 # Name: not_defined # Def: putative exonuclease from phage origin # Organism: E.coli_ED1a # Pathway: not_defined # 1 823 1 823 823 1551 96.0 0 MSKVFICAAIPDEQAIKEEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFLV CEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVK FDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCK PGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARTNQQHSENSTGKISPVIAAIH REYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWAKNEVIDNDREDWKRISASMRKQPD ALRYDRQTIFGLVRERPIDIHKDPVALNKYITEYLTTKGVFEDEGRNQSATDTLSSPVPE TDAVETAIPGNEKTECKVEVEPSVEREGPFYFLFTDKDGEKYGRANKLSGLEKALALGAT EITKEEYFARKNGTYSGSQQNTGASDTTAQPEPVKVTADEVNKIMQAANISQPDADKLLA ASRGEFVAGISDPNDPKWVKGIETRDSVNQNQQESEQNDQKAEQNSPNTQQNEPETKQPE PVAQQEPEKVCTACGQSGGGNCPDCGAVMGDATYQETFDEENQVEVQENDPKEMEGAEHP HKENAGSAQDHASDSETGETADPLIAMNGHHVITSTSRTCDHLMIDLETMGKNPDAPIIS IGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDVIKRWLKQSREAQSAIMTDEIPLDDAL LQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKA IDFDARTAIPFEGERHNALDDARYQAKYISVIWQKLIPNQADF >gi|299857059|gb|ADWS01000005.1| GENE 231 235252 - 235443 171 63 aa, chain - ## HITS:1 COG:no KEGG:ECO111_1046 NR:ns ## KEGG: ECO111_1046 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 63 4 66 66 120 100.0 2e-26 MNTAFALVLTVFLVSGEPVDIAVSVHRTMQECVTAATEQKIPGNCYPVDKVIHQDNNEIP AGL >gi|299857059|gb|ADWS01000005.1| GENE 232 235440 - 235628 153 62 aa, chain - ## HITS:1 COG:no KEGG:ECSP_2138 NR:ns ## KEGG: ECSP_2138 # Name: not_defined # Def: putative inhibitor of cell division encoded by cryptic prophage CP-933P # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 62 36 97 97 128 98.0 6e-29 METLLPNINTSEGCFEIGVTISNPVFTEDAINKRKHERELLNKICILSMLARLRPIQKGC WQ Prediction of potential genes in microbial genomes Time: Sun May 15 21:54:00 2011 Seq name: gi|299857058|gb|ADWS01000006.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont5.1, whole genome shotgun sequence Length of sequence - 198416 bp Number of predicted genes - 185, with homology - 185 Number of transcription units - 92, operones - 42 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 341 - 471 98.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. + Prom 508 - 567 3.9 1 1 Tu 1 . + CDS 796 - 2094 995 ## COG0477 Permeases of the major facilitator superfamily 2 2 Op 1 3/0.711 - CDS 2091 - 2414 295 ## COG5544 Predicted periplasmic lipoprotein - Term 2421 - 2458 3.7 3 2 Op 2 3/0.711 - CDS 2460 - 3815 1342 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 4 3 Op 1 3/0.711 - CDS 3929 - 6589 2222 ## COG1042 Acyl-CoA synthetase (NDP forming) 5 3 Op 2 3/0.711 - CDS 6621 - 7145 473 ## COG3148 Uncharacterized conserved protein - Term 7349 - 7381 5.4 6 4 Tu 1 . - CDS 7388 - 7807 178 ## PROTEIN SUPPORTED gi|124485582|ref|YP_001030198.1| ribosomal protein L12E/L44/L45/RPP1/RPP2-like protein - Prom 7866 - 7925 6.1 + Prom 7815 - 7874 3.2 7 5 Tu 1 . + CDS 8014 - 9051 972 ## COG0566 rRNA methylases + Term 9230 - 9270 0.1 - Term 9045 - 9084 5.1 8 6 Tu 1 . - CDS 9099 - 9788 611 ## COG0692 Uracil DNA glycosylase - Prom 10023 - 10082 6.2 + Prom 9849 - 9908 6.5 9 7 Tu 1 . + CDS 10092 - 10475 513 ## COG3445 Acid-induced glycyl radical enzyme + Term 10498 - 10533 7.4 - Term 10486 - 10521 7.4 10 8 Tu 1 . - CDS 10530 - 11117 508 ## COG1280 Putative threonine efflux protein - Prom 11171 - 11230 3.9 + Prom 11117 - 11176 3.5 11 9 Tu 1 . + CDS 11220 - 12101 466 ## COG0583 Transcriptional regulator + Term 12105 - 12145 3.9 - Term 12093 - 12131 7.1 12 10 Tu 1 . - CDS 12134 - 13468 1466 ## COG0513 Superfamily II DNA and RNA helicases - Prom 13600 - 13659 4.2 + Prom 13502 - 13561 2.4 13 11 Tu 1 . + CDS 13600 - 14337 697 ## COG4123 Predicted O-methyltransferase + Term 14502 - 14539 -0.9 14 12 Tu 1 . - CDS 14322 - 15944 1090 ## COG0029 Aspartate oxidase - Prom 16183 - 16242 5.1 + Prom 16075 - 16134 5.0 15 13 Op 1 . + CDS 16200 - 16355 65 ## ECBD_1107 hypothetical protein 16 13 Op 2 11/0.026 + CDS 16352 - 16927 344 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 17 13 Op 3 10/0.026 + CDS 16960 - 17610 535 ## COG3073 Negative regulator of sigma E activity 18 13 Op 4 8/0.053 + CDS 17610 - 18566 801 ## COG3026 Negative regulator of sigma E activity 19 13 Op 5 4/0.579 + CDS 18563 - 19042 294 ## COG3086 Positive regulator of sigma E activity + Term 19053 - 19097 -0.9 + Prom 19096 - 19155 5.6 20 14 Op 1 14/0.000 + CDS 19240 - 21039 2059 ## COG0481 Membrane GTPase LepA 21 14 Op 2 13/0.000 + CDS 21055 - 22029 1039 ## COG0681 Signal peptidase I + Term 22042 - 22087 14.1 + Prom 22080 - 22139 1.8 22 15 Op 1 18/0.000 + CDS 22301 - 22981 623 ## COG0571 dsRNA-specific ribonuclease 23 15 Op 2 16/0.000 + CDS 22978 - 23883 1071 ## COG1159 GTPase 24 15 Op 3 9/0.026 + CDS 23895 - 24623 537 ## COG1381 Recombinational DNA repair protein (RecF pathway) 25 15 Op 4 8/0.053 + CDS 24635 - 25366 958 ## COG0854 Pyridoxal phosphate biosynthesis protein 26 15 Op 5 . + CDS 25366 - 25746 267 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) + Term 25764 - 25824 12.4 - Term 26405 - 26439 1.1 27 16 Op 1 1/0.921 - CDS 26440 - 26700 288 ## COG1145 Ferredoxin 28 16 Op 2 . - CDS 26756 - 27604 823 ## COG1737 Transcriptional regulators + Prom 27620 - 27679 3.7 29 17 Op 1 2/0.842 + CDS 27813 - 28448 457 ## COG0560 Phosphoserine phosphatase 30 17 Op 2 . + CDS 28506 - 29009 447 ## COG0590 Cytosine/adenosine deaminases 31 18 Tu 1 . - CDS 29006 - 30562 1719 ## COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein - Prom 30710 - 30769 4.0 32 19 Tu 1 . + CDS 30823 - 34707 4328 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Term 34786 - 34815 0.4 33 20 Tu 1 . + CDS 35328 - 36710 1007 ## COG0642 Signal transduction histidine kinase + Prom 36743 - 36802 1.7 34 21 Op 1 . + CDS 36874 - 37587 434 ## EcHS_A2708 hypothetical protein 35 21 Op 2 4/0.579 + CDS 37577 - 38911 1271 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 36 21 Op 3 . + CDS 38972 - 39310 484 ## COG0347 Nitrogen regulatory protein PII 37 22 Tu 1 . - CDS 39355 - 40545 1322 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Prom 40583 - 40642 7.3 + Prom 40749 - 40808 5.6 38 23 Tu 1 . + CDS 40873 - 42126 1542 ## COG0112 Glycine/serine hydroxymethyltransferase + Term 42153 - 42182 2.1 - Term 42141 - 42170 2.1 39 24 Tu 1 . - CDS 42190 - 43383 1099 ## COG1940 Transcriptional regulator/sugar kinase - Prom 43408 - 43467 3.6 + Prom 43297 - 43356 2.9 40 25 Tu 1 . + CDS 43501 - 46782 2973 ## EcE24377A_2834 TPR repeat-containing protein + Prom 46791 - 46850 9.9 41 26 Op 1 16/0.000 + CDS 46879 - 47862 1055 ## COG1879 ABC-type sugar transport system, periplasmic component 42 26 Op 2 21/0.000 + CDS 47885 - 49396 188 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 43 26 Op 3 3/0.711 + CDS 49421 - 50419 1130 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 44 26 Op 4 2/0.842 + CDS 50494 - 51546 1095 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 45 26 Op 5 . + CDS 51558 - 52430 746 ## COG2017 Galactose mutarotase and related enzymes + Term 52440 - 52483 4.6 - Term 52428 - 52471 8.4 46 27 Op 1 1/0.921 - CDS 52478 - 52900 477 ## COG2259 Predicted membrane protein 47 27 Op 2 6/0.184 - CDS 52997 - 54199 1005 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 48 27 Op 3 3/0.711 - CDS 54209 - 55021 804 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 49 27 Op 4 4/0.579 - CDS 55018 - 55338 145 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 50 27 Op 5 6/0.184 - CDS 55338 - 55856 368 ## COG5517 Small subunit of phenylpropionate dioxygenase 51 27 Op 6 . - CDS 55853 - 57214 1286 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - Prom 57263 - 57322 2.2 + Prom 57172 - 57231 5.4 52 28 Tu 1 . + CDS 57350 - 58240 714 ## COG0583 Transcriptional regulator + Prom 58283 - 58342 2.1 53 29 Tu 1 . + CDS 58400 - 59539 964 ## COG0477 Permeases of the major facilitator superfamily + Term 59703 - 59767 -0.8 54 30 Tu 1 . - CDS 59531 - 60715 785 ## COG3711 Transcriptional antiterminator - Prom 60917 - 60976 3.9 55 31 Tu 1 . - CDS 61002 - 61856 742 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 61894 - 61953 2.0 - Term 61943 - 61967 -1.0 56 32 Tu 1 . - CDS 62001 - 62804 1043 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Prom 62840 - 62899 3.9 57 33 Tu 1 . + CDS 62923 - 63660 995 ## COG0565 rRNA methylase + Prom 63867 - 63926 4.7 58 34 Op 1 13/0.000 + CDS 63961 - 64449 542 ## COG1959 Predicted transcriptional regulator 59 34 Op 2 20/0.000 + CDS 64561 - 65775 1664 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 60 34 Op 3 14/0.000 + CDS 65803 - 66189 574 ## COG0822 NifU homolog involved in Fe-S cluster formation 61 34 Op 4 . + CDS 66206 - 66529 466 ## COG0316 Uncharacterized conserved protein 62 34 Op 5 . + CDS 66459 - 66617 59 ## EcSMS35_2680 hypothetical protein 63 34 Op 6 11/0.026 + CDS 66625 - 67140 610 ## COG1076 DnaJ-domain-containing proteins 1 64 34 Op 7 13/0.000 + CDS 67157 - 69007 2263 ## COG0443 Molecular chaperone 65 34 Op 8 9/0.026 + CDS 69009 - 69344 424 ## COG0633 Ferredoxin 66 34 Op 9 2/0.842 + CDS 69356 - 69556 377 ## COG2975 Uncharacterized protein conserved in bacteria + Term 69691 - 69722 3.9 + Prom 69577 - 69636 1.8 67 35 Tu 1 . + CDS 69734 - 71017 1604 ## COG0260 Leucyl aminopeptidase + Prom 71048 - 71107 7.1 68 36 Tu 1 . + CDS 71159 - 71935 682 ## ECIAI1_2574 enhanced serine sensitivity protein SseB + Term 72010 - 72036 1.0 - Term 72371 - 72412 9.0 69 37 Tu 1 . - CDS 72428 - 73273 799 ## COG2897 Rhodanese-related sulfurtransferase - Prom 73430 - 73489 2.7 + Prom 73383 - 73442 4.2 70 38 Op 1 7/0.079 + CDS 73480 - 78441 4423 ## COG2373 Large extracellular alpha-helical protein 71 38 Op 2 1/0.921 + CDS 78442 - 80754 1266 ## COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC + Prom 80794 - 80853 3.7 72 39 Op 1 . + CDS 80903 - 81334 500 ## COG0105 Nucleoside diphosphate kinase + Prom 81338 - 81397 2.5 73 39 Op 2 . + CDS 81484 - 82638 1372 ## COG0820 Predicted Fe-S-cluster redox enzyme + Term 82645 - 82690 10.3 + Prom 82775 - 82834 6.0 74 40 Op 1 10/0.026 + CDS 82923 - 83936 597 ## COG1426 Uncharacterized protein conserved in bacteria 75 40 Op 2 11/0.026 + CDS 83963 - 85081 1233 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis + Term 85091 - 85122 4.5 76 41 Op 1 12/0.000 + CDS 85192 - 86466 1464 ## COG0124 Histidyl-tRNA synthetase 77 41 Op 2 9/0.026 + CDS 86484 - 87104 691 ## COG2976 Uncharacterized protein conserved in bacteria 78 41 Op 3 7/0.079 + CDS 87115 - 88293 1176 ## COG1520 FOG: WD40-like repeat + Term 88314 - 88355 10.4 + Prom 88316 - 88375 1.8 79 42 Op 1 . + CDS 88411 - 89883 1999 ## COG1160 Predicted GTPases 80 42 Op 2 . + CDS 89952 - 90167 122 ## S2728 hypothetical protein 81 43 Tu 1 . - CDS 90164 - 91534 1097 ## COG1570 Exonuclease VII, large subunit - Prom 91569 - 91628 5.0 + Prom 91600 - 91659 6.7 82 44 Op 1 13/0.000 + CDS 91696 - 93162 1741 ## COG0516 IMP dehydrogenase/GMP reductase + Term 93169 - 93204 6.1 83 44 Op 2 . + CDS 93231 - 94808 2014 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 94839 - 94870 3.4 - Term 94818 - 94865 6.9 84 45 Op 1 . - CDS 94903 - 95442 597 ## ECP_2508 hypothetical protein 85 45 Op 2 . - CDS 95458 - 95973 355 ## SSON_2587 putative outer membrane lipoprotein - Prom 96095 - 96154 9.0 - Term 96192 - 96233 2.2 86 46 Tu 1 . - CDS 96287 - 96478 140 ## EcSMS35_2653 hypothetical protein - Prom 96580 - 96639 7.7 + Prom 96085 - 96144 8.6 87 47 Tu 1 . + CDS 96323 - 96613 118 ## EC55989_2789 hypothetical protein + Term 96654 - 96704 1.5 88 48 Tu 1 . + CDS 96998 - 99073 1539 ## COG2200 FOG: EAL domain + Term 99279 - 99326 2.1 - Term 99066 - 99106 10.3 89 49 Op 1 11/0.026 - CDS 99112 - 100653 1334 ## COG0248 Exopolyphosphatase 90 49 Op 2 4/0.579 - CDS 100658 - 102724 2006 ## COG0855 Polyphosphate kinase - Prom 102760 - 102819 2.8 - Term 102847 - 102878 2.4 91 50 Op 1 21/0.000 - CDS 102895 - 103533 684 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 92 50 Op 2 . - CDS 103533 - 104570 1243 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase - Prom 104614 - 104673 7.0 + Prom 104800 - 104859 7.5 93 51 Op 1 5/0.316 + CDS 104895 - 105521 823 ## COG0035 Uracil phosphoribosyltransferase + Term 105540 - 105572 3.1 + Prom 105523 - 105582 7.5 94 51 Op 2 6/0.184 + CDS 105607 - 106896 1017 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Prom 106903 - 106962 3.7 95 52 Tu 1 . + CDS 107015 - 107692 583 ## COG0593 ATPase involved in DNA replication initiation 96 53 Op 1 6/0.184 - CDS 107830 - 108189 534 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 97 53 Op 2 . - CDS 108210 - 109673 1735 ## COG4783 Putative Zn-dependent protease, contains TPR repeats - Prom 109742 - 109801 3.1 + Prom 109757 - 109816 4.5 98 54 Tu 1 . + CDS 109886 - 110947 1343 ## COG0628 Predicted permease + Term 110951 - 110992 7.3 - Term 111014 - 111049 -0.7 99 55 Op 1 1/0.921 - CDS 111101 - 111832 322 ## COG2116 Formate/nitrite family of transporters 100 55 Op 2 . - CDS 111854 - 113866 1518 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains 101 55 Op 3 . - CDS 113896 - 114309 343 ## EC55989_2775 putative processing element hydrogenase 4 102 55 Op 4 6/0.184 - CDS 114302 - 115060 478 ## COG3260 Ni,Fe-hydrogenase III small subunit 103 55 Op 5 5/0.316 - CDS 115057 - 115596 299 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 104 55 Op 6 7/0.079 - CDS 115606 - 117321 1768 ## COG3261 Ni,Fe-hydrogenase III large subunit 105 55 Op 7 7/0.079 - CDS 117311 - 118891 1261 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 106 55 Op 8 3/0.711 - CDS 118896 - 119546 622 ## COG4237 Hydrogenase 4 membrane component (E) 107 55 Op 9 1/0.921 - CDS 119558 - 119923 252 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 108 55 Op 10 1/0.921 - CDS 119959 - 120336 164 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 109 55 Op 11 1/0.921 - CDS 120333 - 120701 363 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 110 56 Op 1 10/0.026 - CDS 120804 - 121748 868 ## COG0650 Formate hydrogenlyase subunit 4 111 56 Op 2 5/0.316 - CDS 121759 - 122991 879 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit - Prom 123013 - 123072 2.8 112 57 Op 1 4/0.579 - CDS 123105 - 123776 494 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 113 57 Op 2 1/0.921 - CDS 123776 - 124393 308 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 - Prom 124435 - 124494 3.4 114 58 Op 1 4/0.579 - CDS 124646 - 125116 510 ## COG1225 Peroxiredoxin 115 58 Op 2 . - CDS 125116 - 125688 407 ## COG2716 Glycine cleavage system regulatory protein - Prom 125717 - 125776 6.0 + Prom 125576 - 125635 3.0 116 59 Op 1 9/0.026 + CDS 125834 - 126712 804 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 117 59 Op 2 . + CDS 126729 - 127763 862 ## COG3317 Uncharacterized lipoprotein + Term 127771 - 127802 3.2 - Term 127559 - 127589 2.7 118 60 Tu 1 . - CDS 127674 - 127904 91 ## SDY_2665 hypothetical protein - Prom 127932 - 127991 3.6 119 61 Tu 1 . + CDS 127976 - 128689 1157 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Term 128708 - 128749 9.7 + Prom 128707 - 128766 3.9 120 62 Op 1 7/0.079 + CDS 128815 - 129072 260 ## COG4456 Virulence-associated protein and related proteins 121 62 Op 2 . + CDS 129072 - 129470 173 ## COG1487 Predicted nucleic acid-binding protein, contains PIN domain + Prom 129511 - 129570 2.1 122 63 Op 1 4/0.579 + CDS 129617 - 130480 863 ## COG2321 Predicted metalloprotease 123 63 Op 2 . + CDS 130534 - 132510 1138 ## COG1444 Predicted P-loop ATPase fused to an acetyltransferase 124 64 Tu 1 . + CDS 132584 - 133282 778 ## COG0400 Predicted esterase + Term 133374 - 133407 -0.9 125 65 Op 1 . - CDS 133392 - 133592 310 ## G2583_2995 hypothetical protein 126 65 Op 2 9/0.026 - CDS 133620 - 134747 1099 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 127 65 Op 3 3/0.711 - CDS 134751 - 135107 347 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 135153 - 135212 5.7 - Term 135593 - 135641 7.5 128 66 Tu 1 . - CDS 135646 - 138759 3269 ## COG0841 Cation/multidrug efflux pump - Prom 138859 - 138918 4.7 129 67 Tu 1 . - CDS 138923 - 140623 1240 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific - Prom 140701 - 140760 2.8 + Prom 140683 - 140742 2.3 130 68 Op 1 3/0.711 + CDS 140829 - 142808 1555 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 131 68 Op 2 . + CDS 142876 - 143451 683 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 132 69 Tu 1 . + CDS 143700 - 144620 639 ## SSON_2546 hypothetical protein - Term 144643 - 144700 5.5 133 70 Op 1 13/0.000 - CDS 144716 - 146719 2216 ## COG0021 Transketolase 134 70 Op 2 . - CDS 146739 - 147689 976 ## COG0176 Transaldolase - Prom 147836 - 147895 3.3 + Prom 147798 - 147857 3.5 135 71 Tu 1 . + CDS 147978 - 150257 2711 ## COG0281 Malic enzyme + Prom 150320 - 150379 5.5 136 72 Op 1 4/0.579 + CDS 150550 - 150885 385 ## COG4810 Ethanolamine utilization protein 137 72 Op 2 4/0.579 + CDS 150898 - 151377 393 ## COG4917 Ethanolamine utilization protein 138 72 Op 3 4/0.579 + CDS 151352 - 152053 716 ## COG4766 Ethanolamine utilization protein 139 72 Op 4 4/0.579 + CDS 152050 - 152853 818 ## COG4812 Ethanolamine utilization cobalamin adenosyltransferase 140 72 Op 5 1/0.921 + CDS 152850 - 153866 855 ## COG0280 Phosphotransacetylase 141 72 Op 6 4/0.579 + CDS 153905 - 154198 465 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein + Term 154206 - 154243 5.6 142 73 Op 1 4/0.579 + CDS 154305 - 154592 248 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein 143 73 Op 2 4/0.579 + CDS 154604 - 156007 837 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 144 73 Op 3 2/0.842 + CDS 156018 - 156854 856 ## COG4820 Ethanolamine utilization protein, possible chaperonin 145 73 Op 4 2/0.842 + CDS 156844 - 158031 1160 ## COG1454 Alcohol dehydrogenase, class IV + Prom 158055 - 158114 2.4 146 74 Op 1 4/0.579 + CDS 158148 - 159374 1591 ## COG3192 Ethanolamine utilization protein 147 74 Op 2 5/0.316 + CDS 159371 - 160774 1335 ## COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition 148 74 Op 3 8/0.053 + CDS 160786 - 162147 1578 ## COG4303 Ethanolamine ammonia-lyase, large subunit 149 74 Op 4 6/0.184 + CDS 162168 - 163055 1018 ## COG4302 Ethanolamine ammonia-lyase, small subunit 150 74 Op 5 4/0.579 + CDS 163065 - 163724 738 ## COG4816 Ethanolamine utilization protein 151 74 Op 6 2/0.842 + CDS 163737 - 164237 414 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 152 74 Op 7 . + CDS 164283 - 165335 917 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 165066 - 165099 -0.6 153 75 Op 1 4/0.579 - CDS 165341 - 166240 743 ## COG0408 Coproporphyrinogen III oxidase 154 75 Op 2 . - CDS 166244 - 167113 813 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 167222 - 167281 4.2 + Prom 167240 - 167299 4.3 155 76 Op 1 . + CDS 167327 - 167752 592 ## COG0456 Acetyltransferases 156 76 Op 2 . + CDS 167739 - 168188 300 ## ECO103_2951 putative inner membrane protein 157 76 Op 3 . + CDS 168249 - 168824 466 ## SDY_2630 hypothetical protein + Term 168880 - 168911 2.1 158 76 Op 4 . + CDS 168920 - 169819 1082 ## COG2837 Predicted iron-dependent peroxidase + Term 169843 - 169882 5.3 - Term 169831 - 169870 5.3 159 77 Op 1 1/0.921 - CDS 169877 - 171181 1216 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 160 77 Op 2 9/0.026 - CDS 171186 - 172610 1509 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 161 77 Op 3 . - CDS 172614 - 173510 900 ## COG2103 Predicted sugar phosphate isomerase - Prom 173551 - 173610 6.4 + Prom 173483 - 173542 3.5 162 78 Tu 1 . + CDS 173674 - 174531 817 ## COG1737 Transcriptional regulators + Prom 174552 - 174611 3.9 163 79 Tu 1 . + CDS 174660 - 175451 248 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 175464 - 175500 5.1 + Prom 175541 - 175600 4.8 164 80 Op 1 7/0.079 + CDS 175622 - 176638 1345 ## COG4150 ABC-type sulfate transport system, periplasmic component 165 80 Op 2 17/0.000 + CDS 176638 - 177471 966 ## COG0555 ABC-type sulfate transport system, permease component 166 80 Op 3 17/0.000 + CDS 177471 - 178346 1072 ## COG4208 ABC-type sulfate transport system, permease component 167 80 Op 4 5/0.316 + CDS 178336 - 179433 1400 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component 168 80 Op 5 . + CDS 179489 - 180478 562 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 169 81 Tu 1 . - CDS 180481 - 180849 410 ## ECO103_2938 hypothetical protein - Prom 180940 - 180999 2.5 + Prom 180812 - 180871 3.1 170 82 Tu 1 . + CDS 180954 - 181805 820 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Term 181810 - 181840 3.0 - Term 181797 - 181827 3.0 171 83 Op 1 10/0.026 - CDS 181847 - 182356 681 ## COG2190 Phosphotransferase system IIA components 172 83 Op 2 25/0.000 - CDS 182397 - 184124 1812 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 173 83 Op 3 6/0.184 - CDS 184169 - 184426 378 ## COG1925 Phosphotransferase system, HPr-related proteins - Prom 184590 - 184649 5.8 - Term 184754 - 184781 0.1 174 84 Tu 1 8/0.053 - CDS 184810 - 185781 702 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 185814 - 185873 4.4 - Term 185894 - 185926 4.1 175 85 Tu 1 . - CDS 185966 - 186601 539 ## COG2981 Uncharacterized protein involved in cysteine biosynthesis - Prom 186766 - 186825 3.3 + Prom 186725 - 186784 2.7 176 86 Op 1 7/0.079 + CDS 186960 - 187943 718 ## COG3115 Cell division protein + Term 187975 - 188003 1.3 177 86 Op 2 3/0.711 + CDS 188014 - 190029 2160 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 178 86 Op 3 . + CDS 190031 - 190249 263 ## COG3530 Uncharacterized protein conserved in bacteria + Term 190253 - 190297 -0.8 - Term 190190 - 190235 3.1 179 87 Tu 1 . - CDS 190246 - 191244 760 ## COG0385 Predicted Na+-dependent transporter - Prom 191301 - 191360 5.0 + Prom 191249 - 191308 3.7 180 88 Tu 1 . + CDS 191334 - 192260 612 ## COG0583 Transcriptional regulator + Term 192358 - 192386 -0.0 181 89 Tu 1 . - CDS 192251 - 192592 322 ## ECIAI1_2465 conserved hypothetical protein, putative FlxA protein - Prom 192652 - 192711 3.5 - TRNA 192712 - 192787 99.5 # Lys TTT 0 0 - TRNA 192792 - 192867 94.3 # Val TAC 0 0 - TRNA 192914 - 192989 94.3 # Val TAC 0 0 - TRNA 193034 - 193109 94.3 # Val TAC 0 0 + Prom 193250 - 193309 4.9 182 90 Tu 1 . + CDS 193368 - 194783 1675 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 194798 - 194843 6.3 - Term 194792 - 194826 3.5 183 91 Op 1 . - CDS 194835 - 195227 236 ## JW2394 predicted DNA-binding transcriptional regulator 184 91 Op 2 . - CDS 195229 - 195588 360 ## SDY_2596 hypothetical protein - Prom 195620 - 195679 5.6 + TRNA 195809 - 195884 86.5 # Ala GGC 0 0 + TRNA 195924 - 195999 86.5 # Ala GGC 0 0 + Prom 196114 - 196173 3.2 185 92 Tu 1 . + CDS 196208 - 198397 1492 ## COG2200 FOG: EAL domain Predicted protein(s) >gi|299857058|gb|ADWS01000006.1| GENE 1 796 - 2094 995 432 aa, chain + ## HITS:1 COG:kgtP KEGG:ns NR:ns ## COG: kgtP COG0477 # Protein_GI_number: 16130512 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 432 1 432 432 752 100.0 0 MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTT QLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCMMCFGSLVIACLPGYETIG TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV VVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRALKEAGSLKGLWR NRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIG ALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGIL KAEMFPAQVRALGVGLSYAVANAIFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVS LMLHRKGKGMRL >gi|299857058|gb|ADWS01000006.1| GENE 2 2091 - 2414 295 107 aa, chain - ## HITS:1 COG:STM2653 KEGG:ns NR:ns ## COG: STM2653 COG5544 # Protein_GI_number: 16765973 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Salmonella typhimurium LT2 # 1 107 1 107 107 155 76.0 2e-38 MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFG LMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH >gi|299857058|gb|ADWS01000006.1| GENE 3 2460 - 3815 1342 451 aa, chain - ## HITS:1 COG:ECs3452 KEGG:ns NR:ns ## COG: ECs3452 COG1502 # Protein_GI_number: 15832706 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli O157:H7 # 1 431 2 432 452 877 100.0 0 MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKIASAKQRICIVALYLEQ DDGGKGILNALYEAKRQRPELDVRVLVDWHRAQRGRIGAAASNTNADWYCRMAQENPGVD VPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYLHQHDKYRYDRYHLIRNRKMS DIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLFRQELRDAAYHFQGDADNDQLSV TPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNLPAILVRNIIQLLREGKKVEIIVGD KTANDFYIPEDEPFKIIGALPYLYEINLRRFLSRLQYYVNTDQLVVRLWKDDDNTYHLKG MWVDDKWMLITGNNLNPRAWRLDLENAILIHDPQLELAPQREKELELIREHTTIVKHYRD LQSIADYPVKVRKLIRRLRRIRIDRLISRIL >gi|299857058|gb|ADWS01000006.1| GENE 4 3929 - 6589 2222 886 aa, chain - ## HITS:1 COG:yfiQ_1 KEGG:ns NR:ns ## COG: yfiQ_1 COG1042 # Protein_GI_number: 16130509 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Escherichia coli K12 # 1 709 1 709 709 1363 99.0 0 MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAW PDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMR LLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIAL GDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAP AALALDALWSRNGKLATLSEETCQKLRDALPGHVAISNPLDLRDDASSEHYIKTLDILLH SQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFSE AGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVML YLRTANEVQQAANAIFDRVKMAWPQARVHGLLVQSMANRAGAQELRVVVEHDPVFGPLIM LGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQV SNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVEL KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMA FVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGL QRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLAQREES >gi|299857058|gb|ADWS01000006.1| GENE 5 6621 - 7145 473 174 aa, chain - ## HITS:1 COG:ECs3449 KEGG:ns NR:ns ## COG: ECs3449 COG3148 # Protein_GI_number: 15832703 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 174 67 240 240 348 100.0 4e-96 MFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLDLVQNPDYQPMVVFPASYADEQ REVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRLREAQAEG QYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV >gi|299857058|gb|ADWS01000006.1| GENE 6 7388 - 7807 178 139 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|124485582|ref|YP_001030198.1| ribosomal protein L12E/L44/L45/RPP1/RPP2-like protein [Methanocorpusculum labreanum Z] # 55 136 35 115 120 73 46 8e-12 MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGETLDKLLKDDLPVVIDFW APWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVD MLNGAVPKAPFDSWLNESL >gi|299857058|gb|ADWS01000006.1| GENE 7 8014 - 9051 972 345 aa, chain + ## HITS:1 COG:ECs3447 KEGG:ns NR:ns ## COG: ECs3447 COG0566 # Protein_GI_number: 15832701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Escherichia coli O157:H7 # 1 345 1 345 345 670 99.0 0 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSYIDPEVLRRQRAEETRVYGENACQALF QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA >gi|299857058|gb|ADWS01000006.1| GENE 8 9099 - 9788 611 229 aa, chain - ## HITS:1 COG:ung KEGG:ns NR:ns ## COG: ung COG0692 # Protein_GI_number: 16130505 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Escherichia coli K12 # 1 229 1 229 229 463 99.0 1e-130 MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVI LGQDPYHGPGQAHGLAFSVRPGIATPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVL LLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRH HVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMPVLPAESE >gi|299857058|gb|ADWS01000006.1| GENE 9 10092 - 10475 513 127 aa, chain + ## HITS:1 COG:ECs3445 KEGG:ns NR:ns ## COG: ECs3445 COG3445 # Protein_GI_number: 15832699 # Func_class: R General function prediction only # Function: Acid-induced glycyl radical enzyme # Organism: Escherichia coli O157:H7 # 1 127 1 127 127 243 100.0 9e-65 MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVVAVSKLGDIEYREVPVE VKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIA RTFTESL >gi|299857058|gb|ADWS01000006.1| GENE 10 10530 - 11117 508 195 aa, chain - ## HITS:1 COG:yfiK KEGG:ns NR:ns ## COG: yfiK COG1280 # Protein_GI_number: 16130503 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli K12 # 1 195 1 195 195 329 99.0 2e-90 MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGI SFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKI ILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNI VLALLLIYCAVRIFY >gi|299857058|gb|ADWS01000006.1| GENE 11 11220 - 12101 466 293 aa, chain + ## HITS:1 COG:yfiE KEGG:ns NR:ns ## COG: yfiE COG0583 # Protein_GI_number: 16130502 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 293 16 308 308 558 96.0 1e-159 MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFSVQLFEKIGRRMCLTRE GKKLLPHIYELTRVMDTLREAAKKESDPDGELRVVSGETLLSYRMPQVLQRFRQRAPKVR LSLQSLNCYVIRDALLNDEADVGVFYRVGNDDVLNRRELGEQPLVLVASPQIADIDFTEP GRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIELISIESIKRCVAANIGVSYLPRF AVGNELASGELIELPFGEQTQTITAMCAHHAGKAVSPAMHTFIQCVEECFVAG >gi|299857058|gb|ADWS01000006.1| GENE 12 12134 - 13468 1466 444 aa, chain - ## HITS:1 COG:ECs3442 KEGG:ns NR:ns ## COG: ECs3442 COG0513 # Protein_GI_number: 15832696 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 778 99.0 0 MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL GKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKVKEKEKPRVKKRH RDTKNIGKRRKPSGTGVPPQTTEE >gi|299857058|gb|ADWS01000006.1| GENE 13 13600 - 14337 697 245 aa, chain + ## HITS:1 COG:yfiC KEGG:ns NR:ns ## COG: yfiC COG4123 # Protein_GI_number: 16130500 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Escherichia coli K12 # 1 245 41 285 285 507 99.0 1e-144 MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLAL MLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWITQQTVRFDLII SNPPYYQQGVECATPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLPEQIGNGFTEL ALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGPDQNYSEAYTALTQA FYLFM >gi|299857058|gb|ADWS01000006.1| GENE 14 14322 - 15944 1090 540 aa, chain - ## HITS:1 COG:nadB KEGG:ns NR:ns ## COG: nadB COG0029 # Protein_GI_number: 16130499 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Escherichia coli K12 # 1 540 1 540 540 1121 98.0 0 MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDET DSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHVQPNGEESYHLTR EGGHSHRRILHAADATGREVQSTLVSKAQNHPNIRVLERSNAVDLIVSDKIGLPGTRRVV GAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEF NQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHE MKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPIPIVPAAHYTCGGVMVD DHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMPYAHGVSTLP PWDESRVENPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAH FRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTHSGPSILSPGNHYINR >gi|299857058|gb|ADWS01000006.1| GENE 15 16200 - 16355 65 51 aa, chain + ## HITS:1 COG:no KEGG:ECBD_1107 NR:ns ## KEGG: ECBD_1107 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 51 1 51 51 67 98.0 2e-10 MIRLQHDKQKQMRYGTLQKRDTLILCLLKLQLMEWRFDSAWKFGLGRLYLG >gi|299857058|gb|ADWS01000006.1| GENE 16 16352 - 16927 344 191 aa, chain + ## HITS:1 COG:ECs3439 KEGG:ns NR:ns ## COG: ECs3439 COG1595 # Protein_GI_number: 15832693 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 360 100.0 1e-100 MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRA LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPEN LMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA IDNKVQPLIRR >gi|299857058|gb|ADWS01000006.1| GENE 17 16960 - 17610 535 216 aa, chain + ## HITS:1 COG:rseA KEGG:ns NR:ns ## COG: rseA COG3073 # Protein_GI_number: 16130497 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Escherichia coli K12 # 1 216 1 216 216 329 100.0 2e-90 MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVM AAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQH YNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDY ELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ >gi|299857058|gb|ADWS01000006.1| GENE 18 17610 - 18566 801 318 aa, chain + ## HITS:1 COG:ECs3437 KEGG:ns NR:ns ## COG: ECs3437 COG3026 # Protein_GI_number: 15832691 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 614 100.0 1e-176 MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYELSFISINKQGVESLRY RHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFK RLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDTESKLPMRVDLLDRDGETL EQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKAKFSWTPTWLPQGFSEVSSSRRP LPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQMLRTGRRTVSTSVRDNAEITIVGEL PPQTAKRIAENIKFGAAQ >gi|299857058|gb|ADWS01000006.1| GENE 19 18563 - 19042 294 159 aa, chain + ## HITS:1 COG:rseC KEGG:ns NR:ns ## COG: rseC COG3086 # Protein_GI_number: 16130495 # Func_class: T Signal transduction mechanisms # Function: Positive regulator of sigma E activity # Organism: Escherichia coli K12 # 1 159 1 159 159 293 99.0 8e-80 MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPCDEPLV PGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFASDVAALCGAVLGGIGGFLI ARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ >gi|299857058|gb|ADWS01000006.1| GENE 20 19240 - 21039 2059 599 aa, chain + ## HITS:1 COG:ECs3435 KEGG:ns NR:ns ## COG: ECs3435 COG0481 # Protein_GI_number: 15832689 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Escherichia coli O157:H7 # 1 599 1 599 599 1167 100.0 0 MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVT LDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAM EMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVQDVLERLVRDI PPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDKVKVMSTGQTYNADRLGIF TPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTLARNPAEKALPGFKKVKPQVYAGLF PVSSDDYEAFRDALGKLSLNDASLFYEPESSSALGFGFRCGFLGLLHMEIIQERLEREYD LDLITTAPTVVYEVETTSREVIYVDSPSKLPAVNNIYELREPIAECHMLLPQAYLGNVIT LCVEKRGVQTNMVYHGNQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDM VRVDVLINGERVDALALITHRDNSQNRGRELVEKMKDLIPRQQFDIAIQAAIGTHIIARS TVKQLRKNVLAKCYGGDISRKKKLLQKQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK >gi|299857058|gb|ADWS01000006.1| GENE 21 21055 - 22029 1039 324 aa, chain + ## HITS:1 COG:ECs3434 KEGG:ns NR:ns ## COG: ECs3434 COG0681 # Protein_GI_number: 15832688 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 651 100.0 0 MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGDSLDKATLKKVAPKPGW LETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTL IETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENA LPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILT VPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAI WMSFDKQEGEWPTGVRLSRIGGIH >gi|299857058|gb|ADWS01000006.1| GENE 22 22301 - 22981 623 226 aa, chain + ## HITS:1 COG:ECs3433 KEGG:ns NR:ns ## COG: ECs3433 COG0571 # Protein_GI_number: 15832687 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Escherichia coli O157:H7 # 1 226 1 226 226 422 100.0 1e-118 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE >gi|299857058|gb|ADWS01000006.1| GENE 23 22978 - 23883 1071 301 aa, chain + ## HITS:1 COG:era KEGG:ns NR:ns ## COG: era COG1159 # Protein_GI_number: 16130491 # Func_class: R General function prediction only # Function: GTPase # Organism: Escherichia coli K12 # 1 301 1 301 301 599 99.0 1e-171 MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIY VDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRDGKAPVI LAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHF PEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVERE GQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLGYVDD L >gi|299857058|gb|ADWS01000006.1| GENE 24 23895 - 24623 537 242 aa, chain + ## HITS:1 COG:ECs3431 KEGG:ns NR:ns ## COG: ECs3431 COG1381 # Protein_GI_number: 15832685 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 242 1 242 242 468 99.0 1e-132 MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRF GGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSL AGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDN KTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH YE >gi|299857058|gb|ADWS01000006.1| GENE 25 24635 - 25366 958 243 aa, chain + ## HITS:1 COG:ECs3430 KEGG:ns NR:ns ## COG: ECs3430 COG0854 # Protein_GI_number: 15832684 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Escherichia coli O157:H7 # 1 243 1 243 243 436 99.0 1e-122 MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRI LRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDAC KRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAAI FAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLE ARG >gi|299857058|gb|ADWS01000006.1| GENE 26 25366 - 25746 267 126 aa, chain + ## HITS:1 COG:acpS KEGG:ns NR:ns ## COG: acpS COG0736 # Protein_GI_number: 16130488 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Escherichia coli K12 # 1 126 1 126 126 237 98.0 5e-63 MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWAIWKTHHQPVRFLAKRFAVKEAA AKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVVNMHVTLADERHYACA TVIIES >gi|299857058|gb|ADWS01000006.1| GENE 27 26440 - 26700 288 86 aa, chain - ## HITS:1 COG:yfhL KEGG:ns NR:ns ## COG: yfhL COG1145 # Protein_GI_number: 16130487 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli K12 # 1 86 1 86 86 153 100.0 6e-38 MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTI VKDPAHVETEEQLWDKFVLMHHADKI >gi|299857058|gb|ADWS01000006.1| GENE 28 26756 - 27604 823 282 aa, chain - ## HITS:1 COG:ECs3427 KEGG:ns NR:ns ## COG: ECs3427 COG1737 # Protein_GI_number: 15832681 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 282 25 306 306 520 99.0 1e-147 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA SISACHAQGMLTDLLFIALIQQDLELAPERIRQSEALMKKLV >gi|299857058|gb|ADWS01000006.1| GENE 29 27813 - 28448 457 211 aa, chain + ## HITS:1 COG:STM2569 KEGG:ns NR:ns ## COG: STM2569 COG0560 # Protein_GI_number: 16765889 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Salmonella typhimurium LT2 # 1 211 1 211 211 365 91.0 1e-101 MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAAR WPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITG SPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYS GYSDSNQDNPLLYFCQHRWRVTPRGELQQLE >gi|299857058|gb|ADWS01000006.1| GENE 30 28506 - 29009 447 167 aa, chain + ## HITS:1 COG:yfhC KEGG:ns NR:ns ## COG: yfhC COG0590 # Protein_GI_number: 16130484 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Escherichia coli K12 # 1 167 12 178 178 335 98.0 2e-92 MSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEI MALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGAHDAKTGAAGSLMDV LHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD >gi|299857058|gb|ADWS01000006.1| GENE 31 29006 - 30562 1719 518 aa, chain - ## HITS:1 COG:yfhD KEGG:ns NR:ns ## COG: yfhD COG4623 # Protein_GI_number: 16130483 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein # Organism: Escherichia coli K12 # 47 518 1 472 472 912 99.0 0 MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEIN GKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQ PGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKDTKFPELSWKVD DKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNT LSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAE EIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYL QDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQ KPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTE LGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN >gi|299857058|gb|ADWS01000006.1| GENE 32 30823 - 34707 4328 1294 aa, chain + ## HITS:1 COG:ECs3423_1 KEGG:ns NR:ns ## COG: ECs3423_1 COG0046 # Protein_GI_number: 15832677 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Escherichia coli O157:H7 # 1 984 2 985 985 1992 99.0 0 MEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLNAPLNDDEHAQLERLLKY GPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQVNRLERGVAYYIEAGTLTN EQWQQVTAELHDRMMETVFFDLDDAEQLFAHHQPTPVTSVDLLGQGRQALIDANLRLGLA LAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGEQQPKSLFRMI KNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHETGRYDFHQEPAHILMKVETHNHPTA ISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPERIVT ALDIMTEGPLGGAAFNNEFGRPALNGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIR ADHVQKGEINVGAKLVVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRC QEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILNDEPGMSPLE IWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLP LDVLLGKTPKMTRDVQTLKAKGDALVREGITIADAVKRVLHLPTVAEKTFLVTIGDRSVT GMVARDQMVGPWQVPVANCAVTTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALT NIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSM KTRWQEGNEEREMTSPLSLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGAT ALAQVYRQLGDKPADVRNVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAG HCGINADIASLGDDRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVFG NRFVITANGQTVFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKL SFDINEDVAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLAGRTG LEDFHALVACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMM SNLRELIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRV EVRDAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITSVTTESGRVTIMMPHP ERVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG >gi|299857058|gb|ADWS01000006.1| GENE 33 35328 - 36710 1007 460 aa, chain + ## HITS:1 COG:ECs3422 KEGG:ns NR:ns ## COG: ECs3422 COG0642 # Protein_GI_number: 15832676 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 15 460 51 496 496 838 99.0 0 MLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEAMTNAALEMERSYRQY CVLDDPTLAKVYQSQRKRYSEMLDAHAGELPDDKLYQALRQDLNNLAQLQCNNSGPDAAA AARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTR MIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLR HLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQ ADSAVELENVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSN AVHYGAESGNICLRSSSHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSG LGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK >gi|299857058|gb|ADWS01000006.1| GENE 34 36874 - 37587 434 237 aa, chain + ## HITS:1 COG:no KEGG:EcHS_A2708 NR:ns ## KEGG: EcHS_A2708 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 237 3 239 239 410 99.0 1e-113 MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIPVYQLADYLSTECSDIW ALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQNTFKQGILLADAKITPYE RRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEERQRYSKLQQSSDSELDTLRQQ HHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTPHESEKPAPSTHEVTPDEP >gi|299857058|gb|ADWS01000006.1| GENE 35 37577 - 38911 1271 444 aa, chain + ## HITS:1 COG:ECs3420 KEGG:ns NR:ns ## COG: ECs3420 COG2204 # Protein_GI_number: 15832674 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 835 99.0 0 MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMD EMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDA LEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNA SPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDM PAPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDLYYRLNVV SLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVI EQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAARM AGRNRTEFYKLLSRHELDANDFKE >gi|299857058|gb|ADWS01000006.1| GENE 36 38972 - 39310 484 112 aa, chain + ## HITS:1 COG:ECs3419 KEGG:ns NR:ns ## COG: ECs3419 COG0347 # Protein_GI_number: 15832673 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 191 100.0 4e-49 MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVK IEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI >gi|299857058|gb|ADWS01000006.1| GENE 37 39355 - 40545 1322 396 aa, chain - ## HITS:1 COG:ZhmpA_2 KEGG:ns NR:ns ## COG: ZhmpA_2 COG1018 # Protein_GI_number: 15803077 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 EDL933 # 150 396 1 247 247 513 99.0 1e-145 MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNA IAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFSPGQEVLDAW GKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAKTPRSALITSFELEPVDGGAV AEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVG DVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGD VHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKQEGAFSDPTMQFY LCGPVGFMQFAAKQLVDLGVKQENIHYECFGPHKVL >gi|299857058|gb|ADWS01000006.1| GENE 38 40873 - 42126 1542 417 aa, chain + ## HITS:1 COG:glyA KEGG:ns NR:ns ## COG: glyA COG0112 # Protein_GI_number: 16130476 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Escherichia coli K12 # 1 417 1 417 417 811 100.0 0 MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMN LAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGV VDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL AKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVE VFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS GIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIERIKGKVLDICARYPVYA >gi|299857058|gb|ADWS01000006.1| GENE 39 42190 - 43383 1099 397 aa, chain - ## HITS:1 COG:ECs3416 KEGG:ns NR:ns ## COG: ECs3416 COG1940 # Protein_GI_number: 15832670 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli O157:H7 # 1 397 3 399 399 812 99.0 0 MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNI DDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDVPTPQA LLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYLLEEKL GIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH TIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQS GEPWITSWVDRSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDR DEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI >gi|299857058|gb|ADWS01000006.1| GENE 40 43501 - 46782 2973 1093 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_2834 NR:ns ## KEGG: EcE24377A_2834 # Name: not_defined # Def: TPR repeat-containing protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 1093 32 1124 1124 2221 99.0 0 MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYGVTDTLSEQKTLKSWQA VWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPALVGLLGPWISGGIEFNWP QHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMTGFTLRPERAALEIASRVYNG NATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKRAVSAFPIATGTYYKVDYSAGVD ISRYKNVPVPTSYMAEKSQYDFVGAWCHDEDGGLLHVANHHIAPGKKQWSWGHSEFGQAW DKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEEKRFEQYFLPYHSLGMVQNASRDAVIK LQRSERGIEWGLYAISPLNGYRLAIREIGKCNALLDDAVALMPATAIQGVLHGINPERLT IELSDADGNIVLSYQEHQPQELPLPDVAKAPLSAQDITSTDEAWFIGQHLEQYHHASRSP FDYYLRGVALDPLDYRCNLALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLI RASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACP TNQEVLCLHNLLLVLSGRQDNARVQREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLC QGRDVNALMTAGQLINWGMPTLATEMLNALDCQRTLSLYLQASLLPKAERGELVAKAIDV FPQFVRFPNTLEEVAALESIEECWFARHLLACFYYNKRSYNKAITLWQRCVEMSPEFADG WRGLAIHAWNKQHDYELAARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENN LEIALKRDDMTAELLNLWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQ HLDARQPQQASELLHAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEAMRCLRL AATGDRTINIHSYYNDQPVDYLFWQGMALRLLGEQHTAQQLFSEMKQWAQEMAKTSIEAD FFAVSQPDLLSLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAAL FTTVMPFIFNYVH >gi|299857058|gb|ADWS01000006.1| GENE 41 46879 - 47862 1055 327 aa, chain + ## HITS:1 COG:ECs3414 KEGG:ns NR:ns ## COG: ECs3414 COG1879 # Protein_GI_number: 15832668 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 601 99.0 1e-172 MPKKMRTTRNLLLMATLLGSALFARAAEKEMTIGAIYLDTQGYYAGVRQGVQDAAKDSSV QVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNT CINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRK GFEEVLKSRVPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVR NQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVLAQTLKVINKQADGEK VIQVPIDLYTKTEDGKQWLATHVDGLP >gi|299857058|gb|ADWS01000006.1| GENE 42 47885 - 49396 188 503 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 278 480 21 212 305 77 27 6e-13 MFTATDAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSE RPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGM IDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSL ASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHH IVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAG RSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDEN TVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVY AASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHG TFSQEFHSPVNVDELMSAILSVH >gi|299857058|gb|ADWS01000006.1| GENE 43 49421 - 50419 1130 332 aa, chain + ## HITS:1 COG:ECs3412 KEGG:ns NR:ns ## COG: ECs3412 COG1172 # Protein_GI_number: 15832666 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 332 1 332 332 489 98.0 1e-138 MSASSLSLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDA ATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEVPLAVACLLVLLLGALMGT LAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSAL IMIVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGIL LAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGI NSFFQQVVRGVIIVVAVLANILLTQRSSKAKR >gi|299857058|gb|ADWS01000006.1| GENE 44 50494 - 51546 1095 350 aa, chain + ## HITS:1 COG:yphC KEGG:ns NR:ns ## COG: yphC COG1063 # Protein_GI_number: 16130470 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 350 15 364 364 720 99.0 0 MLAAYLPGNSTVDLREVAVPTPGINQVLIKMKSSGICGSDVHYIYHQHRATAAAPDKPLY QGFINGHEPCGQIVAMGQGCRHFKEGDRVLVYHISGCGFCPNCRRGFPISCTGKGKAAYG WQRDGGHAEYLLAEEKDLILLPDALSYEDGAFISCGVGTAYEGILRGEVSGSDKVLVVGL GPVGMMAMMLAKGRGAKRIIGVDMLPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGG ADVALDCSGNAAGRLLALQSTADWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLF HMEKCAHDLTDWKLWPRNAITHRFSLEQAGDAYALMASGKCGKVVINFPD >gi|299857058|gb|ADWS01000006.1| GENE 45 51558 - 52430 746 290 aa, chain + ## HITS:1 COG:yphB KEGG:ns NR:ns ## COG: yphB COG2017 # Protein_GI_number: 16130469 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli K12 # 1 290 1 290 290 596 100.0 1e-170 MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGN RFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAF HLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCE QLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPA FDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL >gi|299857058|gb|ADWS01000006.1| GENE 46 52478 - 52900 477 140 aa, chain - ## HITS:1 COG:yphA KEGG:ns NR:ns ## COG: yphA COG2259 # Protein_GI_number: 16130468 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 140 25 164 164 236 100.0 7e-63 MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQYMASLGAPMPMLAAII AVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNVSI AGAFLLLAITGPGAISLDRR >gi|299857058|gb|ADWS01000006.1| GENE 47 52997 - 54199 1005 400 aa, chain - ## HITS:1 COG:ECs3408 KEGG:ns NR:ns ## COG: ECs3408 COG0446 # Protein_GI_number: 15832662 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 747 97.0 0 MKEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLSKSMLLEDSPQLQ QVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDA LGERCFTLRHAGDAARLREVLQPERSVVIVGAGTIGLELAASATQRRCKVTVIELAATVM GRNAPPPVQRYLLQRHQQAGVRILLNNAIEHVVDGEKVELTLQSGETLQADVVIYGIGIS ANEQLAREANLDTANGIVIDEACRTCDPAIFAGGDVAITRLDNGALHRCESWENANNQAQ IAAAAMLGLPLPLLPPPWFWSDQYSDNLQFIGDMRGDDWLCRGNPETQKAIWFNLQNGVL IGAVTLNQGREIRPIRKWIQSGKTFDAKLLIDENIALKSL >gi|299857058|gb|ADWS01000006.1| GENE 48 54209 - 55021 804 270 aa, chain - ## HITS:1 COG:hcaB KEGG:ns NR:ns ## COG: hcaB COG1028 # Protein_GI_number: 16130466 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 270 1 270 270 507 99.0 1e-144 MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGN VTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGY LLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRV NGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLASRR NNRALSGVMINADAGLAIRGIRHVAAGLDL >gi|299857058|gb|ADWS01000006.1| GENE 49 55018 - 55338 145 106 aa, chain - ## HITS:1 COG:ECs3406 KEGG:ns NR:ns ## COG: ECs3406 COG2146 # Protein_GI_number: 15832660 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Escherichia coli O157:H7 # 1 106 1 106 106 209 100.0 1e-54 MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATV ECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLPEAQP >gi|299857058|gb|ADWS01000006.1| GENE 50 55338 - 55856 368 172 aa, chain - ## HITS:1 COG:hcaA2 KEGG:ns NR:ns ## COG: hcaA2 COG5517 # Protein_GI_number: 16130464 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Small subunit of phenylpropionate dioxygenase # Organism: Escherichia coli K12 # 1 172 1 172 172 320 100.0 1e-87 MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQ PPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYL LYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF >gi|299857058|gb|ADWS01000006.1| GENE 51 55853 - 57214 1286 453 aa, chain - ## HITS:1 COG:ECs3404 KEGG:ns NR:ns ## COG: ECs3404 COG4638 # Protein_GI_number: 15832658 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 952 100.0 0 MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWLFLAHESQIPKPGDFFN TYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELID VPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSAPGLRDYLGDIAWYLDGMLDR REGGTEIVGGVQKWVINCNWKFPAEQFASDQYHALFSHASAVQVLGAKDDGSDKRLGDGQ TARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWVDGAVSSYYRETYAEAEQRLGEVRA LRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVEVWAFCITDKAASDEVKAAFENSATRA FGPAGFLEQDDSENWCEIQKLLKGHRARNSKLCLEMGLGQEKRRDDGIPGITNYIFSETA ARGMYQRWADLLSSESWQEVLDKTAAYQQEVMK >gi|299857058|gb|ADWS01000006.1| GENE 52 57350 - 58240 714 296 aa, chain + ## HITS:1 COG:ECs3403 KEGG:ns NR:ns ## COG: ECs3403 COG0583 # Protein_GI_number: 15832657 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 568 100.0 1e-162 MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA GECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTL IELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKEI TAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTL IPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIAIVQERLASVTA >gi|299857058|gb|ADWS01000006.1| GENE 53 58400 - 59539 964 379 aa, chain + ## HITS:1 COG:hcaT KEGG:ns NR:ns ## COG: hcaT COG0477 # Protein_GI_number: 16130461 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 379 1 379 379 634 99.0 0 MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLLLGAGLVARFLGSLLIA PRVSDPSRLISALRVLALLTLLFAVAFWAGAHVAWLMLVMIGFNLFFSPLVPLTDALANT WQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYQVILALLTLGVASMLLGFLIRPTI QPQGASRQQESTGWSAWLALVRQNWRFLACVCLLQGAHAAYYGFSAIYWQAAGYSASAVG YLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAICGVVRWGIMGATTALPWLIVVQILH CGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVAMGGSIAIMTVFAGFLYQYLGHGVFWV MALVALPAMFLRPKVVPSC >gi|299857058|gb|ADWS01000006.1| GENE 54 59531 - 60715 785 394 aa, chain - ## HITS:1 COG:ECs3401 KEGG:ns NR:ns ## COG: ECs3401 COG3711 # Protein_GI_number: 15832655 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli O157:H7 # 1 394 40 433 433 754 99.0 0 MATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLR RGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFL CLYLQYCLLQHHAGITPQFNPLQRRWVESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMA LLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALN RSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQ ENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAP YTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA >gi|299857058|gb|ADWS01000006.1| GENE 55 61002 - 61856 742 284 aa, chain - ## HITS:1 COG:yfhR KEGG:ns NR:ns ## COG: yfhR COG1073 # Protein_GI_number: 16130459 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 284 10 293 293 587 100.0 1e-168 MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGT RLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSK GTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILD STFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYS LAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN >gi|299857058|gb|ADWS01000006.1| GENE 56 62001 - 62804 1043 267 aa, chain - ## HITS:1 COG:ECs3399 KEGG:ns NR:ns ## COG: ECs3399 COG0483 # Protein_GI_number: 15832653 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Escherichia coli O157:H7 # 1 267 1 267 267 530 100.0 1e-150 MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYP QHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPM RNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECA DFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTG NIVAGNPRVVKAMLANMRDELSDALKR >gi|299857058|gb|ADWS01000006.1| GENE 57 62923 - 63660 995 245 aa, chain + ## HITS:1 COG:ECs3398 KEGG:ns NR:ns ## COG: ECs3398 COG0565 # Protein_GI_number: 15832652 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 482 100.0 1e-136 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN KGNKA >gi|299857058|gb|ADWS01000006.1| GENE 58 63961 - 64449 542 162 aa, chain + ## HITS:1 COG:ECs3397 KEGG:ns NR:ns ## COG: ECs3397 COG1959 # Protein_GI_number: 15832651 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 276 99.0 9e-75 MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRG PGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGF LNNITLGELVNNQEVLDVSGRQHTHDAPRTRIQDAIDVKLRA >gi|299857058|gb|ADWS01000006.1| GENE 59 64561 - 65775 1664 404 aa, chain + ## HITS:1 COG:ECs3396 KEGG:ns NR:ns ## COG: ECs3396 COG1104 # Protein_GI_number: 15832650 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Escherichia coli O157:H7 # 1 404 9 412 412 820 100.0 0 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIAD LVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE VTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVD ATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMR SGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNI LNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRF TTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQGVDLNSIEWAHH >gi|299857058|gb|ADWS01000006.1| GENE 60 65803 - 66189 574 128 aa, chain + ## HITS:1 COG:ECs3395 KEGG:ns NR:ns ## COG: ECs3395 COG0822 # Protein_GI_number: 15832649 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Escherichia coli O157:H7 # 1 128 1 128 128 237 100.0 4e-63 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD YKSKREAK >gi|299857058|gb|ADWS01000006.1| GENE 61 66206 - 66529 466 107 aa, chain + ## HITS:1 COG:ECs3394 KEGG:ns NR:ns ## COG: ECs3394 COG0316 # Protein_GI_number: 15832648 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 207 100.0 3e-54 MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGV KVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESFHV >gi|299857058|gb|ADWS01000006.1| GENE 62 66459 - 66617 59 52 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_2680 NR:ns ## KEGG: EcSMS35_2680 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 15 52 1 38 38 78 97.0 9e-14 MKGLNSPTRTLKMSVVAAKASTFDAHTDNPTVVACAWGLFYLIRRYRGGSQP >gi|299857058|gb|ADWS01000006.1| GENE 63 66625 - 67140 610 171 aa, chain + ## HITS:1 COG:ECs3393 KEGG:ns NR:ns ## COG: ECs3393 COG1076 # Protein_GI_number: 15832647 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Escherichia coli O157:H7 # 1 171 1 171 171 269 99.0 2e-72 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT LRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKR VKKMFDTRHQLMVEQLDNEAWDAAADTVRKLRFLDKLRSSAEQLEEKLLDF >gi|299857058|gb|ADWS01000006.1| GENE 64 67157 - 69007 2263 616 aa, chain + ## HITS:1 COG:ECs3392 KEGG:ns NR:ns ## COG: ECs3392 COG0443 # Protein_GI_number: 15832646 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 616 1 616 616 1090 100.0 0 MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETLADHEGRHLLPSVVHYQ QQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPHLPYQFQASENGLPMIETA AGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVL RLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDD FDHLLADYIREQAGIPDRSDNRVQRELLDAAIAAKIALSDADSVTVNVAGWQGEISREQF NELIAPLVKRTLLACRRALKDAGVEADEVLEVVMVGGSTRVPLVRERVGEFFGRPPLTSI DPDKVVAIGAAIQADILVGNKPDSEMLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARA QDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGL LSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVL ESLHGALAADAALLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRM DQSVRRALKGHSVDEV >gi|299857058|gb|ADWS01000006.1| GENE 65 69009 - 69344 424 111 aa, chain + ## HITS:1 COG:ECs3391 KEGG:ns NR:ns ## COG: ECs3391 COG0633 # Protein_GI_number: 15832645 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 207 100.0 3e-54 MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFD SLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRYTINHAREH >gi|299857058|gb|ADWS01000006.1| GENE 66 69356 - 69556 377 66 aa, chain + ## HITS:1 COG:ECs3390 KEGG:ns NR:ns ## COG: ECs3390 COG2975 # Protein_GI_number: 15832644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 66 1 66 66 114 100.0 5e-26 MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLV WLDEAE >gi|299857058|gb|ADWS01000006.1| GENE 67 69734 - 71017 1604 427 aa, chain + ## HITS:1 COG:ECs3389 KEGG:ns NR:ns ## COG: ECs3389 COG0260 # Protein_GI_number: 15832643 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Escherichia coli O157:H7 # 1 427 30 456 456 852 99.0 0 MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLIQRAARKIDGLGIKHVQ LSGEGWDADRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDNRLMIIDWVRDTINAPAEE LGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGLHTVGRGSERSPVLLALDYNP TGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSDMGGAATVTGALAFAITRGLNKR VKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNTDAEGRLVLADGLIDASAQKPELII DAATLTGAAKTALGNDYHALFSFDDALAGRLLASASQENEPFWRLPLAEFHRSQLPSNFA ELNNTGSAAYPAGASTAAGFLSHFVENYQQGWLHIDCSATYRKAPVEQWSAGATGLGVRT IANLLTA >gi|299857058|gb|ADWS01000006.1| GENE 68 71159 - 71935 682 258 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_2574 NR:ns ## KEGG: ECIAI1_2574 # Name: sseB # Def: enhanced serine sensitivity protein SseB # Organism: E.coli_IAI1 # Pathway: not_defined # 1 258 1 258 258 483 100.0 1e-135 MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGEAVVEDSALDLQHWEKE DGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETLFLNAKLPTGKEFMPREIS LLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTTLFKTIKSVKRAFICSIKENE EAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPIDICQVKKGEKGISHFITEHIVPF YERRWGGFLRDFKQNRII >gi|299857058|gb|ADWS01000006.1| GENE 69 72428 - 73273 799 281 aa, chain - ## HITS:1 COG:sseA KEGG:ns NR:ns ## COG: sseA COG2897 # Protein_GI_number: 16130446 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 281 54 334 334 568 99.0 1e-162 MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSD HTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILG GGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARF NVEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGS GVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK >gi|299857058|gb|ADWS01000006.1| GENE 70 73480 - 78441 4423 1653 aa, chain + ## HITS:1 COG:yfhM KEGG:ns NR:ns ## COG: yfhM COG2373 # Protein_GI_number: 16130445 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Escherichia coli K12 # 1 1653 1 1653 1653 3217 99.0 0 MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSENASSAKLSVPERQKLAQ QSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIHVVDKKSGKVDGAWELSDN LKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTITTRDIQPSVGFASRGSLLPGK VVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRNSLANWQSDKLLQMADLVYTGRF DLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAGRYDYSNPATLFTLSDIGVSAHRYH NRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQATSDAQGHVQLENDKNAALLLARKDGQ TTLLDLKLPALDLAEFNIAGAPGYSKQFFMFGPRDLYRPGETVILNGLLRDADGKALPNQ PIKLDVIKPDGQVLRSVVSQPENGLYHFTWPLDSNAATGMWHIRANTGDNQYRMWDFHVE DFMPERMALNLTGEKTPLTPKDEVKFSVVGYYLYGAPANGNTLQGQLFLRPLREAVSALP GFEFGDIAAENLSRTLDEVQLTLDDKGRGEVSTESQWKETHSPLQVIFQGSLLESGGRPV TRRAEQAIWPADALPGIRPQFASKSVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKK AVSGLQVRLIRERRDYYWNWSEDEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGA YRLEVKAPNEAVSSVRFWAGYSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAP TAGKGYAMVESSEGPLWWQEIDVPAQGLDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSAT PKRAVGVLHLPLGDENRRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVD SGVLNITDYVTPDPWQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKP PVNHVNIVAQQALPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAP VIAELNMPRFMASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVR TTLFIPVRALPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQP GETWAIPADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLY TNAAQLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDF LVRAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ KAPLGALREIWEHRADAASGLPLLQLGVALKTMGDATRGEEAIVLALKTPRNSDERIWLG DYGSPLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAARTIQD LPGKWQAQTSFSAEPLTGEKTLNSNLNSDQLATLQVRNSGDQPLWLRVDASGYPQSAPLP ANDVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLPAGLELENQ NLANGSASLEQSGGEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPVTLVYLARAVT PGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP >gi|299857058|gb|ADWS01000006.1| GENE 71 78442 - 80754 1266 770 aa, chain + ## HITS:1 COG:pbpC KEGG:ns NR:ns ## COG: pbpC COG4953 # Protein_GI_number: 16130444 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein PbpC # Organism: Escherichia coli K12 # 1 770 1 770 770 1474 98.0 0 MPRLLTKRGCWITLAAAPFLLFLAAWGADKLWPLPLHEVNPARVVVAQDGTPLWRFADAD GIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGMNPFSVARAAWQDLTSGRVISGGSTLT MQVARLLDPHPKTFGGKIRQLWRALQLEWHLSKREILTLYLNRAPFGGTLQGIGAASWAY LGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAARNKVLERMAVQGAWSREQVKES REEPIWLAPRQMPQLAPLFSRMMLGKSKSDKIVTTLDAGLQRRLEELAQNWKGRLPPRSS LAMIVVDHIDMRVRGWVGSVDLNDDSRFGHVDMVNAIRSPGSVLKPFVYGLALDEGLIHP ASLLQDVPRRTGDYRPGNFDSGFHGPISMSEALVRSLNLPAVQVLEAYGPKRFAAKLRNV GLPLYLPNGAAPNLSLILGGAGAKLEDMAAAYTAFARHGKAGKLRLQPDDPLLERPLMSS GAAWIIRRIMADEAKPLPDSALPRVAPLAWKTGTSYGYRDAWAIGVNARYVIGIWTGRPD GTPVVGQFGFASAVPLLNQVNNILLSRSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNC RRRLATWLLDGSQPPTLLLPEQEGINGIRFPIWLDENGKRVAADCPQARQEMINVWPLPL EPWLPASERRAVRLPPASTICPPYGHDAKLPLQLTGVRDGAIIKRLPGAAEATLPLQSSG GAGERWWFLNGEPLTERGRNVTLHLTDKGDYQLLVMDDVGQIATVKFVMQ >gi|299857058|gb|ADWS01000006.1| GENE 72 80903 - 81334 500 143 aa, chain + ## HITS:1 COG:ECs3380 KEGG:ns NR:ns ## COG: ECs3380 COG0105 # Protein_GI_number: 15832634 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 277 100.0 4e-75 MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFF DGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSD SVESAAREIAYFFGEGEVCPRTR >gi|299857058|gb|ADWS01000006.1| GENE 73 81484 - 82638 1372 384 aa, chain + ## HITS:1 COG:yfgB KEGG:ns NR:ns ## COG: yfgB COG0820 # Protein_GI_number: 16130442 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Escherichia coli K12 # 1 384 1 384 384 790 100.0 0 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM TDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVS SQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDE IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG DVIDRTKRTLRKRMQGEAIDIKAV >gi|299857058|gb|ADWS01000006.1| GENE 74 82923 - 83936 597 337 aa, chain + ## HITS:1 COG:ECs3378 KEGG:ns NR:ns ## COG: ECs3378 COG1426 # Protein_GI_number: 15832632 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 337 1 337 337 543 99.0 1e-154 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTATTTPDGAAPLPT DQAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ >gi|299857058|gb|ADWS01000006.1| GENE 75 83963 - 85081 1233 372 aa, chain + ## HITS:1 COG:ECs3377 KEGG:ns NR:ns ## COG: ECs3377 COG0821 # Protein_GI_number: 15832631 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 711 100.0 0 MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR VSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL AADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNNDMIDQLEARIRAKASQLD EARRIDVQQVEK >gi|299857058|gb|ADWS01000006.1| GENE 76 85192 - 86466 1464 424 aa, chain + ## HITS:1 COG:ECs3376 KEGG:ns NR:ns ## COG: ECs3376 COG0124 # Protein_GI_number: 15832630 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 424 1 424 424 860 100.0 0 MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVT DVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKG RYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARANYRDA LVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQALLNDAPALGDYLDEESREHFAGL CKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRAT PAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKL MTNHGGGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR TLLG >gi|299857058|gb|ADWS01000006.1| GENE 77 86484 - 87104 691 206 aa, chain + ## HITS:1 COG:ECs3375 KEGG:ns NR:ns ## COG: ECs3375 COG2976 # Protein_GI_number: 15832629 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 344 99.0 5e-95 MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNA VTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSD ENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIVADLRGEALLSKGDKQGARSA WEAGVKSDVTPALSEMMQMKINNLSI >gi|299857058|gb|ADWS01000006.1| GENE 78 87115 - 88293 1176 392 aa, chain + ## HITS:1 COG:yfgL KEGG:ns NR:ns ## COG: yfgL COG1520 # Protein_GI_number: 16130437 # Func_class: S Function unknown # Function: FOG: WD40-like repeat # Organism: Escherichia coli K12 # 13 392 13 392 392 717 99.0 0 MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFY SNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGG HVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGA VKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE IDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVD QNDRVMALTIDGGVTLWAQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQ KVDSSGFQTEPVAADGKLLIQAKDGTVYSITR >gi|299857058|gb|ADWS01000006.1| GENE 79 88411 - 89883 1999 490 aa, chain + ## HITS:1 COG:ECs3373 KEGG:ns NR:ns ## COG: ECs3373 COG1160 # Protein_GI_number: 15832627 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Escherichia coli O157:H7 # 1 490 14 503 503 953 100.0 0 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI DGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKT DGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEVDEDAEYWA QFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS IYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISD QDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSG VGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIV VIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRIQFKEGENPYANKRNTLTPTQMRKRK RLMKHIKKNK >gi|299857058|gb|ADWS01000006.1| GENE 80 89952 - 90167 122 71 aa, chain + ## HITS:1 COG:no KEGG:S2728 NR:ns ## KEGG: S2728 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 71 13 83 83 127 97.0 1e-28 MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGL ISKKRVEFVLA >gi|299857058|gb|ADWS01000006.1| GENE 81 90164 - 91534 1097 456 aa, chain - ## HITS:1 COG:xseA KEGG:ns NR:ns ## COG: xseA COG1570 # Protein_GI_number: 16130434 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Escherichia coli K12 # 1 456 1 456 456 814 99.0 0 MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAK LQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDD APGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHET DVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIH HRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQPKIHRA QTRIQQLEYRLAETLRVQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKV KQVKAGEMLTTRLEDGWIESEVKNIQPVKKSRKKVH >gi|299857058|gb|ADWS01000006.1| GENE 82 91696 - 93162 1741 488 aa, chain + ## HITS:1 COG:YPO2871_3 KEGG:ns NR:ns ## COG: YPO2871_3 COG0516 # Protein_GI_number: 16123063 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Yersinia pestis # 207 486 1 280 281 478 94.0 1e-134 MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIA LAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLPTTTLREVKELTERNGFAG YPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRV EKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAA GVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGGNVATAAGARALAEAGCSAVKVGIG PGSICTTRIVTGVGVPQITAVADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASAVMV GSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGR VAYKGRLKEIIHQQMGGLRSCMGLTGCGTIDELRTKAEFVRISGAGIQESHVHDVTITKE SPNYRLGS >gi|299857058|gb|ADWS01000006.1| GENE 83 93231 - 94808 2014 525 aa, chain + ## HITS:1 COG:ZguaA_2 KEGG:ns NR:ns ## COG: ZguaA_2 COG0519 # Protein_GI_number: 15803031 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Escherichia coli O157:H7 EDL933 # 207 525 1 319 319 658 99.0 0 MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGP ESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSA LVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVASTESCPFAIMANEEKRFYGVQF HPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVARIREQVGDDKVILGLSGGVDS SVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAG ENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHN VGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEY CDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF MTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE >gi|299857058|gb|ADWS01000006.1| GENE 84 94903 - 95442 597 179 aa, chain - ## HITS:1 COG:no KEGG:ECP_2508 NR:ns ## KEGG: ECP_2508 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 179 1 179 179 176 98.0 3e-43 MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQHDEWVAERNREIQQEKQ RRANAQAAANKRAATAAANKKARQDKLDAEASADKKRDQSYEDELHSLEIQKQKLALAKE EARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGRDLMKSVGKAEENKSDSWFN >gi|299857058|gb|ADWS01000006.1| GENE 85 95458 - 95973 355 171 aa, chain - ## HITS:1 COG:no KEGG:SSON_2587 NR:ns ## KEGG: SSON_2587 # Name: not_defined # Def: putative outer membrane lipoprotein # Organism: S.sonnei # Pathway: not_defined # 1 171 2 172 172 266 100.0 3e-70 MKFKKCLLPVAMLASFTLAGCQSNADDHAADVYQTDQLNTKQETKTVNIISILPAKVAVD NSQNKRNAQAFGALIGAVAGGVIGHNVGSGSNSGTTAGAVGGGAVGAAAGSMVNDKTLVE GVSLTYKEGTKVYTSTQVGKECQFTTGLAVVITTTYNETRIQPNTKCPEKS >gi|299857058|gb|ADWS01000006.1| GENE 86 96287 - 96478 140 63 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_2653 NR:ns ## KEGG: EcSMS35_2653 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 63 1 63 63 94 100.0 8e-19 MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHHQSKKEAQQSTLSVESP VQR >gi|299857058|gb|ADWS01000006.1| GENE 87 96323 - 96613 118 96 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2789 NR:ns ## KEGG: EC55989_2789 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 96 1 96 96 186 100.0 3e-46 MLSFFFALMVLPGTDGRVDKTAKEEDKADEQYDTGHATVKSVSFSHTGCLTHKRFLEVCP TLWTVLTLRHNRTKWSILRYVKKRQWIHILMLWKLI >gi|299857058|gb|ADWS01000006.1| GENE 88 96998 - 99073 1539 691 aa, chain + ## HITS:1 COG:Z3766_3 KEGG:ns NR:ns ## COG: Z3766_3 COG2200 # Protein_GI_number: 15803026 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 EDL933 # 420 691 1 272 272 558 99.0 1e-158 MMFFSWAALPGITLGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHG DTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGN LIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNE KSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLT ITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSAL CYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQE RITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRLPVNHIYLLLGELNTVAELSIVTNAPE NMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGEND ELIGPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFP VEVSQLLDKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYA RLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMRVVAEYIENEEIREAVLS LGIDYMQGYLIGKPQPLIDTLNEIEPIRESA >gi|299857058|gb|ADWS01000006.1| GENE 89 99112 - 100653 1334 513 aa, chain - ## HITS:1 COG:ECs3364 KEGG:ns NR:ns ## COG: ECs3364 COG0248 # Protein_GI_number: 15832618 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 1009 100.0 0 MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEE AMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNE EARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGG VINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPE RLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREG VLYEMEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLE ALLRWAAMLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKLDD LPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNA LVLLDLEKEQEYWEGVAGWRLKIEEESTPEIAA >gi|299857058|gb|ADWS01000006.1| GENE 90 100658 - 102724 2006 688 aa, chain - ## HITS:1 COG:ECs3363 KEGG:ns NR:ns ## COG: ECs3363 COG0855 # Protein_GI_number: 15832617 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Escherichia coli O157:H7 # 1 688 1 688 688 1347 100.0 0 MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRR IIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEMARNQIFLINERQLSVNQQ NWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVEIIRGDTIRYALLEIPSDKVP RFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEME ASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVLREKLTISRYDSIVPGGRYHNFKDF INFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFDAIRERDVLLYYPYHTFEHVLELLRQA SFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTE AGVHVIFSAPGLKIHAKLFLISRKENGEVVRYAHIGTGNFNEKTARLYTDYSLLTADARI TNEVRRVFNFIENPYRPVTFDYLMVSPQNSRRLLYEMVDREIANAQQGLPSGITLKLNNL VDKGLVDRLYAASSSGVPVNLLVRGMCSLIPNLEGISDNIRAISIVDRYLEHDRVYIFEN GGDKKVYLSSADWMTRNIDYRIEVATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSN RYVPRGNRRKVRAQLAIYDYIKSLEQPE >gi|299857058|gb|ADWS01000006.1| GENE 91 102895 - 103533 684 212 aa, chain - ## HITS:1 COG:purN KEGG:ns NR:ns ## COG: purN COG0299 # Protein_GI_number: 16130425 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Escherichia coli K12 # 1 212 1 212 212 430 99.0 1e-121 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASA FDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHT HRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDTEDDITARVQTQEHAIYPLV ISWFADGRLKMHENAAWLDGQRLPPQGYAADE >gi|299857058|gb|ADWS01000006.1| GENE 92 103533 - 104570 1243 345 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 2 345 7 356 356 483 68 1e-135 MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGGFGALCALPQKYREPVL VSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVDTAS AVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKVSDGDV LIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPLADHLLAPTRIYVKSVLELIEKV DVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQWPEVFNWLQTAGNVERHEMYRTFNC GVGMIIALPAPEVDKALALLNANGENAWKIGIIKASDSEQRVVIE >gi|299857058|gb|ADWS01000006.1| GENE 93 104895 - 105521 823 208 aa, chain + ## HITS:1 COG:ECs3360 KEGG:ns NR:ns ## COG: ECs3360 COG0035 # Protein_GI_number: 15832614 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 208 10 217 217 394 100.0 1e-110 MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNGP VEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSN IDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYT ASIDQGLNEHGYIIPGLGDAGDKIFGTK >gi|299857058|gb|ADWS01000006.1| GENE 94 105607 - 106896 1017 429 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 3 423 2 428 447 396 47 1e-109 MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFI CKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLF PPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFL AIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFAILTILPAALVVIA EHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRV YSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDY NKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKLISVLRPEEVVLD AEDADITDK >gi|299857058|gb|ADWS01000006.1| GENE 95 107015 - 107692 583 225 aa, chain + ## HITS:1 COG:ECs3358 KEGG:ns NR:ns ## COG: ECs3358 COG0593 # Protein_GI_number: 15832612 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Escherichia coli O157:H7 # 1 225 24 248 248 447 99.0 1e-126 MPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELS QRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESG KTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPED VGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL >gi|299857058|gb|ADWS01000006.1| GENE 96 107830 - 108189 534 119 aa, chain - ## HITS:1 COG:ECs3357 KEGG:ns NR:ns ## COG: ECs3357 COG1393 # Protein_GI_number: 15832611 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 206 100.0 1e-53 MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKMLGMNSAREL MRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVANGKARIGRPPEQVLEIVG >gi|299857058|gb|ADWS01000006.1| GENE 97 108210 - 109673 1735 487 aa, chain - ## HITS:1 COG:yfgC KEGG:ns NR:ns ## COG: yfgC COG4783 # Protein_GI_number: 16130419 # Func_class: R General function prediction only # Function: Putative Zn-dependent protease, contains TPR repeats # Organism: Escherichia coli K12 # 1 487 1 487 487 872 100.0 0 MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQL RGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSAL FRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMA ALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPP EILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEW AKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKAN EAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAE AALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQER FKPYTKM >gi|299857058|gb|ADWS01000006.1| GENE 98 109886 - 110947 1343 353 aa, chain + ## HITS:1 COG:ECs3355 KEGG:ns NR:ns ## COG: ECs3355 COG0628 # Protein_GI_number: 15832609 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 588 100.0 1e-168 MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQ SIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRR YPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLLTIAVYLVLVPLMVFFLLKDK EQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYSL LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPVL FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE >gi|299857058|gb|ADWS01000006.1| GENE 99 111101 - 111832 322 243 aa, chain - ## HITS:1 COG:focB KEGG:ns NR:ns ## COG: focB COG2116 # Protein_GI_number: 16130417 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli K12 # 1 230 1 230 282 409 99.0 1e-114 MRNKLSFDLQLSARKAAIAERIASHKIARSKVSVFLMAMSAGVFMAIGFTFYLSVIADAP SSQALTHLVGGLCFTLGFILLAVCGTSLFTSSVMTVMAKSRGVISWRTWLINALLVACGN LAGIACFSLLIWFSGLVMSENAMWGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWM SYCGRSLCDKIVAMILPITLFVASGFEHCIANLFVIPFAIAIRHFAPRPFGNWRTVAQTI FRH >gi|299857058|gb|ADWS01000006.1| GENE 100 111854 - 113866 1518 670 aa, chain - ## HITS:1 COG:ECs3353 KEGG:ns NR:ns ## COG: ECs3353 COG3604 # Protein_GI_number: 15832607 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli O157:H7 # 8 670 1 663 663 1307 99.0 0 MAMSDEAMFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPLPPPFSPVQLIELHVLK SNFYYRYHDDGSDVTATVEYQGEMVDYSRHAVLLGSSGMAELRFIRTHGSRFTPQDCTLF NWLARIITPVLQSWLNDEEQQVALRLLEKDRDHHRVLVDITNAVLSHLDLDDLIADVARE IHHFFGLASVSMVLGDHRKNEKFSLWCSDLSASHCACLPRNMPGDSVLLTQTLQTRQPTL THRADDLFLWQRDPLLLLLASNGCESALLIPLTFGNHTPGALLLAHTSSTLFSEENCQLL QHIADRIAIAVGNADAWRSMTDLQESLQQENHQLSEQLLSNLGVGDIIYQSQAMEDLLQQ VDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLESELFGHD KGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVN VRVIAATNRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHM NRAIDAIPTEALRQLMSWDWPGNVRELENVIERAVLLTRGNNLNLHLNVRQSRLLPTLNE DSALRSSMAQLLHPTTPENDEEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQ RLGISVREVL >gi|299857058|gb|ADWS01000006.1| GENE 101 113896 - 114309 343 137 aa, chain - ## HITS:1 COG:no KEGG:EC55989_2775 NR:ns ## KEGG: EC55989_2775 # Name: hyfJ # Def: putative processing element hydrogenase 4 # Organism: E.coli_55989 # Pathway: not_defined # 1 137 1 137 137 266 100.0 1e-70 MAEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGVIDCLNVAFRCPLTEYE DWLAQVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFALLADDATSVWQARSIQFIHLL DEIVQEPAIYLMARKIA >gi|299857058|gb|ADWS01000006.1| GENE 102 114302 - 115060 478 252 aa, chain - ## HITS:1 COG:hyfI KEGG:ns NR:ns ## COG: hyfI COG3260 # Protein_GI_number: 16130414 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III small subunit # Organism: Escherichia coli K12 # 1 251 1 251 252 515 98.0 1e-146 MSPVLTQYVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD AERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLW PQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLREADDPRLNSIV QQLFRVLRGLHG >gi|299857058|gb|ADWS01000006.1| GENE 103 115057 - 115596 299 179 aa, chain - ## HITS:1 COG:ECs3350 KEGG:ns NR:ns ## COG: ECs3350 COG1143 # Protein_GI_number: 15832604 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Escherichia coli O157:H7 # 1 179 1 181 181 299 97.0 2e-81 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACPANALTIQTDDQ QNSRTWQLYLRRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCER PFAPQKTVALAAELLAQQQNAPQNREMLRAQASVCPECKQRATLINDDTDVPLVAKEQL >gi|299857058|gb|ADWS01000006.1| GENE 104 115606 - 117321 1768 571 aa, chain - ## HITS:1 COG:ECs3349_2 KEGG:ns NR:ns ## COG: ECs3349_2 COG3261 # Protein_GI_number: 15832603 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III large subunit # Organism: Escherichia coli O157:H7 # 156 571 1 416 416 864 99.0 0 MNVNSSSNRGEAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHDGWL PVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGERE IRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRLRPEPTTDSETYAFINEGNSD ARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLSD RVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFD TGFMQFFRVREKSMTMAELLTGSRKTYGLNLIGGVRRDILKEQRLQTLKLVREMRADVSE LVEMLLAMPNMEQRTQGIGILDRQIARDYSPVGPLIRGSGFARDLRFDHPYADYGNIPKT LFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFSYKPHAFALGFVEAPR GEDVHWSMLGDNQKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRV TLVDVRKRQSKTVPYKEIERYGIDRNRSPLK >gi|299857058|gb|ADWS01000006.1| GENE 105 117311 - 118891 1261 526 aa, chain - ## HITS:1 COG:ECs3348 KEGG:ns NR:ns ## COG: ECs3348 COG0651 # Protein_GI_number: 15832602 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 1 526 1 526 526 868 99.0 0 MSYSVMFALLLLTPLLFSLLCFACRKRGLSATCTVTVLHSLGITLLLILALWVVQTAADA GEIFAAGLWLHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEVAHGELSPVTLCDYYGFFH LFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGL FGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFVLIGFGTKTGLFPMHA WLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVA AFFILVQRDIKRLLAYSSVENMGLVAVALGIGGPLGIFAALLHTLNHSLAKTLLFCGSGN VLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTVTAGLARNHLL IIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIP QPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER >gi|299857058|gb|ADWS01000006.1| GENE 106 118896 - 119546 622 216 aa, chain - ## HITS:1 COG:ECs3347 KEGG:ns NR:ns ## COG: ECs3347 COG4237 # Protein_GI_number: 15832601 # Func_class: C Energy production and conversion # Function: Hydrogenase 4 membrane component (E) # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 339 100.0 2e-93 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG >gi|299857058|gb|ADWS01000006.1| GENE 107 119558 - 119923 252 121 aa, chain - ## HITS:1 COG:ECs3346 KEGG:ns NR:ns ## COG: ECs3346 COG1009 # Protein_GI_number: 15832600 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Escherichia coli O157:H7 # 1 121 359 479 479 210 98.0 5e-55 MPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGFFSKFPLFAACFALSVEYWILLPAMIL LMIESVASFAWFIRWFGRVVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIAATWL Q >gi|299857058|gb|ADWS01000006.1| GENE 108 119959 - 120336 164 125 aa, chain - ## HITS:1 COG:ECs3346 KEGG:ns NR:ns ## COG: ECs3346 COG1009 # Protein_GI_number: 15832600 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Escherichia coli O157:H7 # 1 102 152 253 479 185 98.0 2e-47 MISYYQSDKAQRSALKALLITHIGSLGLYLAAATLFLQTGTFVLSAMSELHGDARYLVYG GILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGGWHWRAASPTSSTTRSLK ACFSL >gi|299857058|gb|ADWS01000006.1| GENE 109 120333 - 120701 363 122 aa, chain - ## HITS:1 COG:hyfD KEGG:ns NR:ns ## COG: hyfD COG1009 # Protein_GI_number: 16130409 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Escherichia coli K12 # 2 115 31 144 479 193 100.0 5e-50 MGVLFAALTTLCMLSLISAFYQADKVAVTLTLVNVGDVALFGLVIDRVSTLILFVVVFLG LLVTIYSTGYLTDKNREHPHNGTNRYYAFLLVFIGAMAGLVLSSTLLGQLLFFEIRAAAP GR >gi|299857058|gb|ADWS01000006.1| GENE 110 120804 - 121748 868 314 aa, chain - ## HITS:1 COG:ECs3345 KEGG:ns NR:ns ## COG: ECs3345 COG0650 # Protein_GI_number: 15832599 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 4 # Organism: Escherichia coli O157:H7 # 1 314 8 322 322 494 99.0 1e-140 MRQTLCDGYLVIFALAQAVILLLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQ EVAPISSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFAL SGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLATGWNSPLT TVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMAAL FVALFLLFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGF SLAALAWVFWLTGL >gi|299857058|gb|ADWS01000006.1| GENE 111 121759 - 122991 879 410 aa, chain - ## HITS:1 COG:ECs3344 KEGG:ns NR:ns ## COG: ECs3344 COG0651 # Protein_GI_number: 15832598 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 1 410 263 672 672 703 98.0 0 MDLLAQTGLPLWWGTLVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVA MDGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMP WTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGL AVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHI AHAFTNTPPVTVASGIALVPGTFHTRVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRT GDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQFDPTLRLNKGLAHVTARAQSTE PFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV >gi|299857058|gb|ADWS01000006.1| GENE 112 123105 - 123776 494 223 aa, chain - ## HITS:1 COG:ECs3344 KEGG:ns NR:ns ## COG: ECs3344 COG0651 # Protein_GI_number: 15832598 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 1 223 1 223 672 295 89.0 5e-80 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL VAHFATPFDFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNL FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI AFLLMGRESGSLDFASFARFHFLRGWRRRCFCWPFSVLARKPG >gi|299857058|gb|ADWS01000006.1| GENE 113 123776 - 124393 308 205 aa, chain - ## HITS:1 COG:hyfA KEGG:ns NR:ns ## COG: hyfA COG1142 # Protein_GI_number: 16130406 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli K12 # 1 204 14 217 218 376 98.0 1e-104 MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTSTITAPVVCHHCEEAPCL QVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGSRPVNAHAQYVFQAEGSLK DGEENVLPQHALLRWEPGVQTVAVKCDLCDFLPEGPACVRACPNQALRLITDDSLQRQMK EKQRLAASWFANGGEDPLSLTQEQH >gi|299857058|gb|ADWS01000006.1| GENE 114 124646 - 125116 510 156 aa, chain - ## HITS:1 COG:ECs3342 KEGG:ns NR:ns ## COG: ECs3342 COG1225 # Protein_GI_number: 15832596 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 322 100.0 1e-88 MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDEL KKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIH RISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA >gi|299857058|gb|ADWS01000006.1| GENE 115 125116 - 125688 407 190 aa, chain - ## HITS:1 COG:ECs3341 KEGG:ns NR:ns ## COG: ECs3341 COG2716 # Protein_GI_number: 15832595 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system regulatory protein # Organism: Escherichia coli O157:H7 # 1 190 23 212 212 374 99.0 1e-104 MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAMLGEEFTFIMLLSGSWNA ITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDVADSPHLIERFTALFDAHH MNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQAFKALCTELNAQGSINVVNY SQHDEQDGVK >gi|299857058|gb|ADWS01000006.1| GENE 116 125834 - 126712 804 292 aa, chain + ## HITS:1 COG:ECs3340 KEGG:ns NR:ns ## COG: ECs3340 COG0329 # Protein_GI_number: 15832594 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 580 100.0 1e-165 MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVV MMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFK AIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIKEATGNLTRVNQIKELVSDD FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH NKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGLL >gi|299857058|gb|ADWS01000006.1| GENE 117 126729 - 127763 862 344 aa, chain + ## HITS:1 COG:nlpB KEGG:ns NR:ns ## COG: nlpB COG3317 # Protein_GI_number: 16130402 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Escherichia coli K12 # 1 344 2 345 345 624 100.0 1e-179 MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPV TSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQV VSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLN LEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLP MLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLAS GDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK >gi|299857058|gb|ADWS01000006.1| GENE 118 127674 - 127904 91 76 aa, chain - ## HITS:1 COG:no KEGG:SDY_2665 NR:ns ## KEGG: SDY_2665 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 76 8 83 83 133 100.0 2e-30 MRRERLIRTTSDKQISCELPLKSRFPADAHVCVSYQKKGPDDSSPVFLLAKRSLEDSYQR VVLTLSQSMTFRIDEL >gi|299857058|gb|ADWS01000006.1| GENE 119 127976 - 128689 1157 237 aa, chain + ## HITS:1 COG:ECs3338 KEGG:ns NR:ns ## COG: ECs3338 COG0152 # Protein_GI_number: 15832592 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 464 100.0 1e-131 MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNYFIMSK LAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLVKRLGIEEGIELNPPLFDL FLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKANDVLKKLFDDAGLILVDFKLEF GLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSLGGLIEAYEAVARRLGVQLD >gi|299857058|gb|ADWS01000006.1| GENE 120 128815 - 129072 260 85 aa, chain + ## HITS:1 COG:PSLT107 KEGG:ns NR:ns ## COG: PSLT107 COG4456 # Protein_GI_number: 17233505 # Func_class: S Function unknown # Function: Virulence-associated protein and related proteins # Organism: Salmonella typhimurium LT2 # 11 85 2 76 76 128 85.0 3e-30 MTYIPKKGGAMETTVFLSNRSQAVRLPKAVALPEDVKKVEIIAIGRTRIITPAGESWDSW FDGENVSADFMDIRDQPAMQERESF >gi|299857058|gb|ADWS01000006.1| GENE 121 129072 - 129470 173 132 aa, chain + ## HITS:1 COG:PSLT106 KEGG:ns NR:ns ## COG: PSLT106 COG1487 # Protein_GI_number: 17233504 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Salmonella typhimurium LT2 # 1 132 1 132 132 252 93.0 9e-68 MLKFMLDTNICIFTIKNKPVHVRERFNLNSGRMCISSVTLMELIYGAEKSQMPERNLAVI EGFVSRLEVLDYDSAAATHTGQIRAELARQGRPVGPFDQMIAGHARSRGLIVVTNNTREF ERVAGIRLEDWS >gi|299857058|gb|ADWS01000006.1| GENE 122 129617 - 130480 863 287 aa, chain + ## HITS:1 COG:ECs3337 KEGG:ns NR:ns ## COG: ECs3337 COG2321 # Protein_GI_number: 15832591 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 535 99.0 1e-152 MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLLVVLVAGYYGVDLTGLMTG QPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTG CGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFAQGYVIAHEVGHHVQKLLGIE PKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQQQGVLETGDLEEALNAAQAIGD DRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI >gi|299857058|gb|ADWS01000006.1| GENE 123 130534 - 132510 1138 658 aa, chain + ## HITS:1 COG:ypfI KEGG:ns NR:ns ## COG: ypfI COG1444 # Protein_GI_number: 16130399 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase fused to an acetyltransferase # Organism: Escherichia coli K12 # 1 658 14 671 671 1263 97.0 0 MKREGIRRLLVLSGEEGWCFDHALKLRDALPGDWLWISPQPDAENHCSPSALQTLLGREF RHAVFDARHGFDAAAFAALSGTLKAGSWLVLLLPVWEEWENQPDADSLRWSDCPDPIATP HFVQHLKRVLTADNDAILWRQNQPFSLAHFTPRTDWHPATGAPQPEQQQLLQQLLTMPPG VAAVTAARGRGKSALAGQLISRIAGSAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASD EQADWLVVDEAAAIPAPLLHQLVSRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFE LQQPIRWAQGCPLEKMVSEALVFDDENFTHTPQGNIVISAFEQTLWRSEPETPLKVYQLL SGAHYRTSPLDLRRMMDAPGQHFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPR GNLVAQSLAAHGSNPLAATLRGRRVSRIAVHPARQREGTGQQLIAGALQYTRDLDYLSVS FGYTGELWRFWHRCGFVLVRMGNHREASSGCYTAMALLPMSNAGKQLAEREHYRLRRDAQ ALAKWNGETLPVDPLNDAVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALR GRLQKNVSDAQLCTTLKLSGRKMLLVRQREEAAQALFALNDVRTERLRDRITQWQFFH >gi|299857058|gb|ADWS01000006.1| GENE 124 132584 - 133282 778 232 aa, chain + ## HITS:1 COG:ECs3335 KEGG:ns NR:ns ## COG: ECs3335 COG0400 # Protein_GI_number: 15832589 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 232 9 240 240 456 100.0 1e-128 MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPLFPDALVVSVGGAEPSGNP AGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMALES IKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGD VTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM >gi|299857058|gb|ADWS01000006.1| GENE 125 133392 - 133592 310 66 aa, chain - ## HITS:1 COG:no KEGG:G2583_2995 NR:ns ## KEGG: G2583_2995 # Name: ypfN # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 66 1 66 66 85 100.0 7e-16 MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPPHRDFNDKWDDDDDWPK KDQPKK >gi|299857058|gb|ADWS01000006.1| GENE 126 133620 - 134747 1099 375 aa, chain - ## HITS:1 COG:dapE KEGG:ns NR:ns ## COG: dapE COG0624 # Protein_GI_number: 16130397 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli K12 # 1 375 1 375 375 777 99.0 0 MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGET LAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPN HTGRLAFLITSDEEASAHNGTVKVVEALMSRNERLDYCLVGEPSSIEVVGDVVKNGRRGS LTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGT GSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKL VDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQ LLARMYQRIMEQLVA >gi|299857058|gb|ADWS01000006.1| GENE 127 134751 - 135107 347 118 aa, chain - ## HITS:1 COG:ECs3333 KEGG:ns NR:ns ## COG: ECs3333 COG1393 # Protein_GI_number: 15832587 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli O157:H7 # 1 118 1 118 118 243 98.0 5e-65 MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNGFINELGWEALLNTRGT TWRKLDETTRNKITDAASAAALMTEMPAIIKRPLLCAPGKPMLLGFSDSSYQQFFHEV >gi|299857058|gb|ADWS01000006.1| GENE 128 135646 - 138759 3269 1037 aa, chain - ## HITS:1 COG:acrD KEGG:ns NR:ns ## COG: acrD COG0841 # Protein_GI_number: 16130395 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1037 1 1037 1037 2040 99.0 0 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENT VTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQ AVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQDPLSRVNGVGDIDAYGS QYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL QTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEM ATAELVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQ NFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAIVVVENVERIM SEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL SVLVAMILTPALCATLLKPLKKGEHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRW IVIYVLLLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTH EKDNIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSKTGTSFAIIERATKAFNKIKEA RVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLVLAAENPELTRVRHNGLD DSPQLQIDIDQRKAQALGVDIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRML PDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMD IMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVM LVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEA TLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVP LFFVLVRRRFPLKPRPE >gi|299857058|gb|ADWS01000006.1| GENE 129 138923 - 140623 1240 566 aa, chain - ## HITS:1 COG:narQ KEGG:ns NR:ns ## COG: narQ COG3850 # Protein_GI_number: 16130394 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Escherichia coli K12 # 1 566 1 566 566 1075 99.0 0 MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDL QSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPW YQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPL NQLVTASQRIEHGQFDSPPLDTSLPNELGLLAKTFNQMSSELHKLYLSLEASVEEKTRDL HEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGENWRISEGQPNP ELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQKHFQQLLLME ERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQSIMADFSQALNDAYRQLRELL TTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTLALDAQMQVHLLQIIREAVLN AMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLT FSQPSGGGTLVSISFRSAEGEESQLM >gi|299857058|gb|ADWS01000006.1| GENE 130 140829 - 142808 1555 659 aa, chain + ## HITS:1 COG:aegA_2 KEGG:ns NR:ns ## COG: aegA_2 COG0493 # Protein_GI_number: 16130393 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 181 659 1 479 479 997 99.0 0 MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCE DAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHK CDLCAGRENGPACVENCPADALQLVTDVALSGMAKSRRLRTARQEHQPWHASTAAQEMPV MSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTC PLHNHIPQWIELVKAGNIDAAVELSHQTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTI GNIERYISDQALAKGWRPDLSHVTKVDKRVAIIGAGPAGLACADVLTRNGVAVTVYDRHP EIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGV GTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTA MDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHV CGIRFLRTRLGEPDAQGRRRPVPIEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKW GRIIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH >gi|299857058|gb|ADWS01000006.1| GENE 131 142876 - 143451 683 191 aa, chain + ## HITS:1 COG:yffH KEGG:ns NR:ns ## COG: yffH COG0494 # Protein_GI_number: 16130392 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli K12 # 1 191 1 191 191 369 98.0 1e-102 MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNAKKKTV VLIRQFRVATWVNGNESGQLIETCAGLLDNDEPKVCIRKEAIEETGYEVGEVRKLFELYM SPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPFSQALEMIKTGEIRDGKTVLL LNYLQTSHLMD >gi|299857058|gb|ADWS01000006.1| GENE 132 143700 - 144620 639 306 aa, chain + ## HITS:1 COG:no KEGG:SSON_2546 NR:ns ## KEGG: SSON_2546 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 306 42 347 347 603 99.0 1e-171 MARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPDASEGEIAPRLLLDGEPLALSGD KWRISPWLLVTDDTATITAFLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVGS ETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPL RREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNEL ELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDAWP TLWITR >gi|299857058|gb|ADWS01000006.1| GENE 133 144716 - 146719 2216 667 aa, chain - ## HITS:1 COG:tktB KEGG:ns NR:ns ## COG: tktB COG0021 # Protein_GI_number: 16130390 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Escherichia coli K12 # 1 667 1 667 667 1359 99.0 0 MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFI LSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLA NAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEGISHEVCSLAGTLGLGKLIGF YDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSVKDKPSLI ICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKKIYHAWDAREKGE KAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPKDWEKTTQKYINELQANPAKIATRKAS QNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSLKEDPAGNYIHYGVREFGMTAIANGI AHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLAS LRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPDQVKEIARGGY VLKDSGGKPDIILIATGSEMEITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVL PSNVAARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPADKLFPFFGFTAENIVAKAHK VLGVKGA >gi|299857058|gb|ADWS01000006.1| GENE 134 146739 - 147689 976 316 aa, chain - ## HITS:1 COG:ECs3326 KEGG:ns NR:ns ## COG: ECs3326 COG0176 # Protein_GI_number: 15832580 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 635 100.0 0 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLSQYEHLIDDAIAWGKK NGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSFDKEKSIEKARHLVDLYQQ QGVEKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGR IYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYETIVMGASFRRTEQILALTGCDR LTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMSEAEFRWEHNQDAMAVEKLSEGIRL FAVDQRKLEDLLAAKL >gi|299857058|gb|ADWS01000006.1| GENE 135 147978 - 150257 2711 759 aa, chain + ## HITS:1 COG:maeB_1 KEGG:ns NR:ns ## COG: maeB_1 COG0281 # Protein_GI_number: 16130388 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Escherichia coli K12 # 1 434 1 434 434 849 100.0 0 MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLKAYKY TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFI EVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRV VEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAAY AVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKKMARAPMILALANPEPEILPPLAKE VRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDVGATAINEEMKLAAVRAIAELAHAEQS EVVASAYGDQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMESGVATRPIADFDVYIDKL TEFVYKTNLFMKPIFSQARKAPKRVVLPEGEEARVLHATQELVTLGLAKPILIGRPNVIE MRIQKLGLQIKAGVDFEIVNNESDPRFKEYWTEYFQIMKRRGVTQEQAQRALISNPTVIG AIMVQRGEADAMICGTVGDYHEHFSVVKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYV NDEPDAEELAEITLMAAETVRRFGIEPRVALLSHSNFGSSDCPSSSKMRQALELVRDRAP DLMIDGEMHGDAALVEAIRNDRMPDSPLKGSANILVMPNMEAARISYNLLRVSSSEGVTV GPVLMGVAKPVHVLTPIASVRRIVNMVALAVVEAQTQPL >gi|299857058|gb|ADWS01000006.1| GENE 136 150550 - 150885 385 111 aa, chain + ## HITS:1 COG:ECs3324 KEGG:ns NR:ns ## COG: ECs3324 COG4810 # Protein_GI_number: 15832578 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 111 25 135 135 213 100.0 1e-55 MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLAL KAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLNYTLCEMTKS >gi|299857058|gb|ADWS01000006.1| GENE 137 150898 - 151377 393 159 aa, chain + ## HITS:1 COG:ECs3323 KEGG:ns NR:ns ## COG: ECs3323 COG4917 # Protein_GI_number: 15832577 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 315 99.0 2e-86 MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDTPGEYFSHPRWYHALIT TLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTDMPDADVAATRKLLLETGF EEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE >gi|299857058|gb|ADWS01000006.1| GENE 138 151352 - 152053 716 233 aa, chain + ## HITS:1 COG:eutQ KEGG:ns NR:ns ## COG: eutQ COG4766 # Protein_GI_number: 16130385 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli K12 # 1 233 1 233 233 456 100.0 1e-128 MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFTITECDESIPVTASVPA SVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQSLEQGAMQPSFKSVTGKG GIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAGFMQWENAFFPWTLNYDEIDM VLEGELHVRHEGQTMIAKAGDVMFIPKGSSIEFGTTSSVKFLYVAWPANWQSL >gi|299857058|gb|ADWS01000006.1| GENE 139 152050 - 152853 818 267 aa, chain + ## HITS:1 COG:eutT KEGG:ns NR:ns ## COG: eutT COG4812 # Protein_GI_number: 16130384 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization cobalamin adenosyltransferase # Organism: Escherichia coli K12 # 1 267 1 267 267 508 100.0 1e-144 MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLRIKFIDEQGRLFVDDEQ QQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKMVAKSDPRLGFRAVLDSTI ALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGCQAIVGLSDEDLHRLSHQPLR YLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVFITRSFEVLRPDILQALNRLSST VYVMMILSVTKQPLTVKQIQQRLGETQ >gi|299857058|gb|ADWS01000006.1| GENE 140 152850 - 153866 855 338 aa, chain + ## HITS:1 COG:eutI KEGG:ns NR:ns ## COG: eutI COG0280 # Protein_GI_number: 16130383 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Escherichia coli K12 # 1 338 1 338 338 624 100.0 1e-179 MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGV AMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCI AGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGPALGFADCSVVPQPTAAQLAD IALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQF DAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPM HDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQTLVE >gi|299857058|gb|ADWS01000006.1| GENE 141 153905 - 154198 465 97 aa, chain + ## HITS:1 COG:ECs3319 KEGG:ns NR:ns ## COG: ECs3319 COG4577 # Protein_GI_number: 15832573 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli O157:H7 # 1 97 15 111 111 153 100.0 9e-38 MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGA AAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL >gi|299857058|gb|ADWS01000006.1| GENE 142 154305 - 154592 248 95 aa, chain + ## HITS:1 COG:cchB KEGG:ns NR:ns ## COG: cchB COG4576 # Protein_GI_number: 16130381 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli K12 # 1 95 1 95 95 176 100.0 9e-45 MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAIDNIGAGTGEWVLLVSG SSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK >gi|299857058|gb|ADWS01000006.1| GENE 143 154604 - 156007 837 467 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 1 454 1 461 477 327 40 3e-88 MNQQDIEQVVKAVLLKMQSSDTPPAAVHEMGVFASLDDAVAAAKVAQQGLKSVAMRQLAI AAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTPGVECLSPQVLTGDNGLTL IENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAPHPAAKKVSQRAITLLNQAIV AAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGEAVVEAARKHTNKRLIAAGAGNP PVVVDETADLARAAQSIVKGASFDNNIICADEKVLIVVDSVADELMRLMEGQHAVKLTAE QAQQLQPVLLKNIDERGKGTVSRDWVGRDAAKIAAAIGLNVPQETRLLFVETTAEHPFAV TELMMPVLPVVRVANVADAIALAVKLEGGCHHTAAMHSRNIENMNQMANAIDTSIFVKNG PCIAGLGLGGEGWTTMTITTPTGEGVTSARTFVRLRRCVLVDAFRIV >gi|299857058|gb|ADWS01000006.1| GENE 144 156018 - 156854 856 278 aa, chain + ## HITS:1 COG:eutJ KEGG:ns NR:ns ## COG: eutJ COG4820 # Protein_GI_number: 16130379 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin # Organism: Escherichia coli K12 # 1 278 1 278 278 560 99.0 1e-159 MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWA DVVRDGIVWDFFGAVTIVRRHLDTLEQQFGLRFSHAATSFPPGTDPRISINVLESAGLEV SHVLDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKKGKVTYSADEATGGHHISLTLAGNR RISLEEAEQYKRGHGDEIWPAVKPVYEKMADIVARHIEGQGITDLWLAGGSCMQPGVAEL FRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLYAK >gi|299857058|gb|ADWS01000006.1| GENE 145 156844 - 158031 1160 395 aa, chain + ## HITS:1 COG:ECs3315 KEGG:ns NR:ns ## COG: ECs3315 COG1454 # Protein_GI_number: 15832569 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 395 10 404 404 714 98.0 0 MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQAQTRGLKHLFVMADSFL HQAGMTAGLTRSLAVKGIAMTLWLCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLD AAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGTGSETTNVTVIIDAVSGRKQV LAHASLMPDVAILDAALTEGVPSHVTAMTGIDALTHAIEAYSALNATPFTDSLAIGAIAM IGKSLPKAVGYGHDLAARESMLLASCMAGMAFSSAGLGLCHAMAHQPGAALHIPHGLANA MLLPTVMEFNRMVCRERFSQIGRALRTKKSDDHDAINAVSELIAEVGIGKRLGDVGATSA HYGAWAQAAQEDICLRSNPRTASLEQIVGLYAAAQ >gi|299857058|gb|ADWS01000006.1| GENE 146 158148 - 159374 1591 408 aa, chain + ## HITS:1 COG:eutH KEGG:ns NR:ns ## COG: eutH COG3192 # Protein_GI_number: 16130377 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli K12 # 1 408 1 408 408 662 99.0 0 MGINEIIMYIMMFFMLIAAVDRILSQFGGSARFLGKFGKSIEGSGGQFEEGFMAMGALGL AMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACDMGGFFLAKELAGGDVAAW LYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLAGIVTIPIGCIAGGLVAMYSG VQINGQPVEFTFALILMNMIPVIIVAILVALGLKFIPEKMINGFQIFAKFLVALITLGLA AAVVKFLLGWELIPGLDPIFMAPGDKPGEVMRAIEVIGSISCVLLGAYPMVLLLTRWFEK PLMSVGKVLNMNNIAAAGMVATLANNIPMFGMMKQMDTRGKVINCAFAVSAAFALGDHLG FAAANMNAMIFPMIVGKLLGGVTAIGVAMMLVPKEDATATKTEAEAQS >gi|299857058|gb|ADWS01000006.1| GENE 147 159371 - 160774 1335 467 aa, chain + ## HITS:1 COG:ECs3313 KEGG:ns NR:ns ## COG: ECs3313 COG4819 # Protein_GI_number: 15832567 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition # Organism: Escherichia coli O157:H7 # 1 467 1 467 467 887 99.0 0 MNTRQLLSVGIDIGTTTTQVIFSHLELVNRAAVSQVPRYEFIKREISWQSPVFFTPVDKQ GGLKEAELKSLILEQYQAAGIAPESVDSGAIIITGESAKTRNARPAVMALSQSLGDFVVA SAGPHLESVIAGHGAGAQTLSEQRLCRVLNIDIGGGTANYALFDAGKISGTACLNVGGRL LETDSQGRVVYAHKPGQMIVDECFGAGTDARSLTGAQLVQVTRRMAALIVEVIDGTLSPL AQALMQTGLLPAGVTPEIITLSGGVGECYRHQPADPFCFADIGPLLATALHDHPRLREMN VQFPAQTVRATVIGAGAHTLSLSGSTIWLEGVQLPLRNLPVAIPIDETDLVSAWQQALIQ LDLDPKTDAYVLALPASLPVRYAAVLTVINALVDFVARFPNPHPLLVVAGQDFGKALGML LRPQLQQLPLAVIDEVIVRAGDYIDIGTPLFGGSVVPVTVKSLAFPS >gi|299857058|gb|ADWS01000006.1| GENE 148 160786 - 162147 1578 453 aa, chain + ## HITS:1 COG:eutB KEGG:ns NR:ns ## COG: eutB COG4303 # Protein_GI_number: 16130366 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, large subunit # Organism: Escherichia coli K12 # 1 453 15 467 467 924 100.0 0 MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQERVAAKQVLSEMTVADIR NNPVIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVLSDETSVDDIAFTRKGLTSE VVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSARLQPNDTRDDVQSIAAQIYEG LSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHVTTQIEAIRRGAP GGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFNRIAGENCLYFETGQGSALSAGANF GADQVTMEARNYGLARHYDPFIVNTVVGFIGPEYLYNDRQIIRAGLEDHFMGKLSGISMG CDCCYTNHADADQNLNENLMILLATAGCNYIMGMPLGDDIMLNYQTTAFHDTATVRQLLN LRPSPEFERWLESMGIMANGRLTKRAGDPSLFF >gi|299857058|gb|ADWS01000006.1| GENE 149 162168 - 163055 1018 295 aa, chain + ## HITS:1 COG:eutC KEGG:ns NR:ns ## COG: eutC COG4302 # Protein_GI_number: 16130365 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, small subunit # Organism: Escherichia coli K12 # 1 295 1 295 295 554 99.0 1e-158 MDQKQIEEIVRSVMASMGQTAPAPSEAKCATTNCAAPVTSESCALDLGSAEAKAWIGVEN PHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGL LEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEE ILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSC YAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR >gi|299857058|gb|ADWS01000006.1| GENE 150 163065 - 163724 738 219 aa, chain + ## HITS:1 COG:ECs3310 KEGG:ns NR:ns ## COG: ECs3310 COG4816 # Protein_GI_number: 15832564 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 374 98.0 1e-104 MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAE NTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLVTYVPPP SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA >gi|299857058|gb|ADWS01000006.1| GENE 151 163737 - 164237 414 166 aa, chain + ## HITS:1 COG:eutK KEGG:ns NR:ns ## COG: eutK COG4577 # Protein_GI_number: 16130363 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli K12 # 1 166 3 168 168 288 100.0 3e-78 MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAG CAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPDAPVIVAESADELLALLTS VRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSRYRLKPH >gi|299857058|gb|ADWS01000006.1| GENE 152 164283 - 165335 917 350 aa, chain + ## HITS:1 COG:ECs3308 KEGG:ns NR:ns ## COG: ECs3308 COG2207 # Protein_GI_number: 15832562 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 350 1 350 350 711 99.0 0 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRSQSALEVKEQHKA ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEDAQPMVTAESISHQSYRR LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE LISPWSQSTTVKDAAMQWGFWHLGQFATDYQQLFAEKPSLTLHQRMREWG >gi|299857058|gb|ADWS01000006.1| GENE 153 165341 - 166240 743 299 aa, chain - ## HITS:1 COG:hemF KEGG:ns NR:ns ## COG: hemF COG0408 # Protein_GI_number: 16130361 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase # Organism: Escherichia coli K12 # 1 299 1 299 299 620 98.0 1e-178 MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGGRSRVLRNGGVFEQAGV NFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYVPTSHANVRFFIAEKPGAE PVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDDYFYLKHRNEQR GIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRGRY VEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPKDGSPEAALSEFIKVRDWV >gi|299857058|gb|ADWS01000006.1| GENE 154 166244 - 167113 813 289 aa, chain - ## HITS:1 COG:ECs3306 KEGG:ns NR:ns ## COG: ECs3306 COG0860 # Protein_GI_number: 15832560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 532 99.0 1e-151 MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDEPLKTSNGHSKPKAKKSGGKRVVV LDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARLTRSGDTFIPLYDRVEI AHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMAKYLSERENRADEVAGKKATD KDHLLQQVLFDLVQTDTIKNSLMLGSHILKKIKPVHKLHSRNTEQAAFVVLKSPSVPSVL VETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQKAHSKKR >gi|299857058|gb|ADWS01000006.1| GENE 155 167327 - 167752 592 141 aa, chain + ## HITS:1 COG:ECs3305 KEGG:ns NR:ns ## COG: ECs3305 COG0456 # Protein_GI_number: 15832559 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Escherichia coli O157:H7 # 1 141 38 178 178 293 100.0 7e-80 MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMG GYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYER LGYEHADVLSLGKRLIEDEEY >gi|299857058|gb|ADWS01000006.1| GENE 156 167739 - 168188 300 149 aa, chain + ## HITS:1 COG:no KEGG:ECO103_2951 NR:ns ## KEGG: ECO103_2951 # Name: yfeZ # Def: putative inner membrane protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 149 1 149 149 239 100.0 3e-62 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN FWLGLIPGIPAVLAFLLSGRRATFPRTWHVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG LALVVADIVALIWLLTNRRLRACFNEVKE >gi|299857058|gb|ADWS01000006.1| GENE 157 168249 - 168824 466 191 aa, chain + ## HITS:1 COG:no KEGG:SDY_2630 NR:ns ## KEGG: SDY_2630 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 191 1 191 191 378 100.0 1e-104 MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAI ADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGV KIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFSGEWSGPEGLMPSDDTLK NWKVSKIIWRR >gi|299857058|gb|ADWS01000006.1| GENE 158 168920 - 169819 1082 299 aa, chain + ## HITS:1 COG:yfeX KEGG:ns NR:ns ## COG: yfeX COG2837 # Protein_GI_number: 16130356 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Escherichia coli K12 # 1 299 10 308 308 615 99.0 1e-176 MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFG NNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDC IEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNL KQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTA SGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL >gi|299857058|gb|ADWS01000006.1| GENE 159 169877 - 171181 1216 434 aa, chain - ## HITS:1 COG:yfeW KEGG:ns NR:ns ## COG: yfeW COG1680 # Protein_GI_number: 16130355 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli K12 # 1 434 30 463 463 872 99.0 0 MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDAGYPGVNL LIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEG KLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQD KGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHT VFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGL FSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMFTTSSKEDATFGLGWRVNGNATMTPTF GTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPHSPVADPQKNPNMFESGQLPIATY GWVVDQVYAALKQK >gi|299857058|gb|ADWS01000006.1| GENE 160 171186 - 172610 1509 474 aa, chain - ## HITS:1 COG:Z3694_2 KEGG:ns NR:ns ## COG: Z3694_2 COG1263 # Protein_GI_number: 15802960 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 EDL933 # 101 474 1 374 374 654 100.0 0 MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVDPNIKTLEGVKGVILTS DQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQLKAKQTSGVQQFLAKFATI FTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALNFMKVFSKGLFTFLVILVGYN AAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDFFGLPIDPRGNIIGVLIAAWACA RIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIMPLGGWLFEGMSWLFMHLNSNPLGC AVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNSLFPILSMAGAGQVGAALALYWRAQPH SALRSQVRGAIIPGLLGVGEPLIYGVTLPRMKPFITACLGGAAGGLFIGLIAWWGLPMGL NSAFGPSGLVALPLMTSAQGILPAMAVYAGGILVAWVCGFIFTTLFGCRNVNLD >gi|299857058|gb|ADWS01000006.1| GENE 161 172614 - 173510 900 298 aa, chain - ## HITS:1 COG:yfeU KEGG:ns NR:ns ## COG: yfeU COG2103 # Protein_GI_number: 16130353 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Escherichia coli K12 # 1 298 1 298 298 542 99.0 1e-154 MQLEKMITEGSNTASAEIDRVSTLEMCRIINDEDKTVPLAVERVLPDIAAAIDVIHAQVS GGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGGEYAIQHAVEGAEDSREGG VNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCRTVGISCNPGSAVSTTAEFAI TPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGKVFGNLMVDVVATNEKLHVRQVN IVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLDAAEAKKRLDQHGGFIRQVLDKE >gi|299857058|gb|ADWS01000006.1| GENE 162 173674 - 174531 817 285 aa, chain + ## HITS:1 COG:yfeT KEGG:ns NR:ns ## COG: yfeT COG1737 # Protein_GI_number: 16130352 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 285 1 285 285 474 98.0 1e-134 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCSLF DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEW RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK >gi|299857058|gb|ADWS01000006.1| GENE 163 174660 - 175451 248 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 251 4 238 242 100 30 6e-20 MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVV ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNV TKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRV NAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESS YLTGTQNVIDGGSTLPETVSVGI >gi|299857058|gb|ADWS01000006.1| GENE 164 175622 - 176638 1345 338 aa, chain + ## HITS:1 COG:ECs3296 KEGG:ns NR:ns ## COG: ECs3296 COG4150 # Protein_GI_number: 15832550 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 649 99.0 0 MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKL TIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYS TMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKAKT EQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKNKF PQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN >gi|299857058|gb|ADWS01000006.1| GENE 165 176638 - 177471 966 277 aa, chain + ## HITS:1 COG:cysU KEGG:ns NR:ns ## COG: cysU COG0555 # Protein_GI_number: 16130349 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Escherichia coli K12 # 1 277 1 277 277 439 100.0 1e-123 MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWEVITNPQVVAAY KVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFS VNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGAT RWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEF DYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH >gi|299857058|gb|ADWS01000006.1| GENE 166 177471 - 178346 1072 291 aa, chain + ## HITS:1 COG:cysWm KEGG:ns NR:ns ## COG: cysWm COG4208 # Protein_GI_number: 16132224 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Escherichia coli K12 # 1 291 1 291 291 538 100.0 1e-153 MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQAFSKGLMPVLQNLADP DMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLV YLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAA ILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE LLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKRAQQEEHHEH >gi|299857058|gb|ADWS01000006.1| GENE 167 178336 - 179433 1400 365 aa, chain + ## HITS:1 COG:cysA KEGG:ns NR:ns ## COG: cysA COG1118 # Protein_GI_number: 16130348 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Escherichia coli K12 # 1 365 1 365 365 721 99.0 0 MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIR FHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKL LEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLR QLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPNQVWREPATRFVLEFMGEV NRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDISRRTSLDSPLPVQVLEAS PKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGERLFVGLQHARLYNGDERIETRDEELA LAQSA >gi|299857058|gb|ADWS01000006.1| GENE 168 179489 - 180478 562 329 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 24 318 1 304 308 221 39 2e-56 MARFVTCRPDKTRKRRIRQHHVWIEIVSTLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGN NPAGSVKDRAALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDN MSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTT GPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPA EYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPGAV VVAIICDRGDRYLSTGVFGEEHFSQGAGI >gi|299857058|gb|ADWS01000006.1| GENE 169 180481 - 180849 410 122 aa, chain - ## HITS:1 COG:no KEGG:ECO103_2938 NR:ns ## KEGG: ECO103_2938 # Name: yfeK # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 122 1 122 122 234 100.0 5e-61 MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLAQKKDLIFVRNGDEHTCDEAVSHL RLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDENAQPFLHALIAQTDKTVP AQ >gi|299857058|gb|ADWS01000006.1| GENE 170 180954 - 181805 820 283 aa, chain + ## HITS:1 COG:ECs3290 KEGG:ns NR:ns ## COG: ECs3290 COG2240 # Protein_GI_number: 15832544 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 553 99.0 1e-157 MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHY DTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDL LIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAA AKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNVISHSRVKTDLKGTGDLFCAQLI SGLLKGKALNDAVHRAGLRVLEVMRYTQQHESDELILPPLAEA >gi|299857058|gb|ADWS01000006.1| GENE 171 181847 - 182356 681 169 aa, chain - ## HITS:1 COG:crr KEGG:ns NR:ns ## COG: crr COG2190 # Protein_GI_number: 16130343 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Escherichia coli K12 # 1 169 1 169 169 285 100.0 4e-77 MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKM VAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTV IEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRIKK >gi|299857058|gb|ADWS01000006.1| GENE 172 182397 - 184124 1812 575 aa, chain - ## HITS:1 COG:ECs3288 KEGG:ns NR:ns ## COG: ECs3288 COG1080 # Protein_GI_number: 15832542 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli O157:H7 # 1 575 1 575 575 1043 100.0 0 MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFLSGRAKASAQLETIKTK AGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQASALEELDD EYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFI TDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVNPTNEVIDKMR AVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFL FMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAI RIAMDRKEILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAF DESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPS VLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNT NFEDAKVLAEQALAQPTTDELMTLVNKFIEEKTIC >gi|299857058|gb|ADWS01000006.1| GENE 173 184169 - 184426 378 85 aa, chain - ## HITS:1 COG:ECs3287 KEGG:ns NR:ns ## COG: ECs3287 COG1925 # Protein_GI_number: 15832541 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 85 1 85 85 129 100.0 2e-30 MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTV VTISAEGEDEQKAVEHLVKLMAELE >gi|299857058|gb|ADWS01000006.1| GENE 174 184810 - 185781 702 323 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 312 3 304 308 275 49 1e-72 MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK PGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGM KGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGG TLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLD LKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILP SSGERYLSTALFADLFTEKELQQ >gi|299857058|gb|ADWS01000006.1| GENE 175 185966 - 186601 539 211 aa, chain - ## HITS:1 COG:ECs3285 KEGG:ns NR:ns ## COG: ECs3285 COG2981 # Protein_GI_number: 15832539 # Func_class: E Amino acid transport and metabolism # Function: Uncharacterized protein involved in cysteine biosynthesis # Organism: Escherichia coli O157:H7 # 1 211 43 253 253 382 99.0 1e-106 MGGAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYLIPGI GQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSLFTMI PLLNLFIMPVAVCGATAMWVDCYRDKHAMWR >gi|299857058|gb|ADWS01000006.1| GENE 176 186960 - 187943 718 327 aa, chain + ## HITS:1 COG:ZzipA KEGG:ns NR:ns ## COG: ZzipA COG3115 # Protein_GI_number: 15802945 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 EDL933 # 1 327 2 328 328 474 99.0 1e-133 MQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMKSKRDDDSYDEDVEDDE GVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPRQPVQQPPEAQVPPQHAPRP AQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPAQQAFQPAEPVAAPQPEPVAEP APVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQAGFIFGDMNIYHRHLSPDGSGPA LFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYGDELQNFKLMLQSAQHIADEVGGVVL DDQRRMMTPQKLREYQDIIREVKDANA >gi|299857058|gb|ADWS01000006.1| GENE 177 188014 - 190029 2160 671 aa, chain + ## HITS:1 COG:lig KEGG:ns NR:ns ## COG: lig COG0272 # Protein_GI_number: 16130337 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli K12 # 1 671 1 671 671 1314 99.0 0 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLEQQEQL GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI DEAEMLRLLGS >gi|299857058|gb|ADWS01000006.1| GENE 178 190031 - 190249 263 72 aa, chain + ## HITS:1 COG:Z3676 KEGG:ns NR:ns ## COG: Z3676 COG3530 # Protein_GI_number: 15802943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 72 1 72 72 123 100.0 9e-29 MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGKLGELMQITLLIKTEG LTQLVQPLKRPL >gi|299857058|gb|ADWS01000006.1| GENE 179 190246 - 191244 760 332 aa, chain - ## HITS:1 COG:ECs3282 KEGG:ns NR:ns ## COG: ECs3282 COG0385 # Protein_GI_number: 15832536 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Escherichia coli O157:H7 # 1 332 1 332 332 592 100.0 1e-169 MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIALLFFMHGAKLSREAIIA GGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGFLYLCILPATVQSAIAFTS MAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGSLEQVGKIMLQLLLPFVLGHL SRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVNGIWHKVGWGSLLFIVVVSCVLL AIVIVVNVFMARRLGFNKADEITIVFCGSKKSLANGIPMANILFPTSVIGMMVLPLMIFH QIQLMVCAVLARRYKRQTEQLQAQQESSADKA >gi|299857058|gb|ADWS01000006.1| GENE 180 191334 - 192260 612 308 aa, chain + ## HITS:1 COG:yfeR KEGG:ns NR:ns ## COG: yfeR COG0583 # Protein_GI_number: 16130335 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 308 1 308 308 572 99.0 1e-163 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE DYVPWQALQEAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR EGDPLYQI >gi|299857058|gb|ADWS01000006.1| GENE 181 192251 - 192592 322 113 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_2465 NR:ns ## KEGG: ECIAI1_2465 # Name: not_defined # Def: conserved hypothetical protein, putative FlxA protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 113 1 113 113 106 100.0 3e-22 MATISSTSIPSIQTQSSNRASQGSDVASQIARISQQIIKLTQQIKEIVDTSGSAEDKQKQ AELIQQQITLLETQLAQLQKQQAEKAQEKEQCLSLNVSLLNPVEKTTHIDIYI >gi|299857058|gb|ADWS01000006.1| GENE 182 193368 - 194783 1675 471 aa, chain + ## HITS:1 COG:gltX KEGG:ns NR:ns ## COG: gltX COG0008 # Protein_GI_number: 16130330 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 471 1 471 471 983 100.0 0 MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDTDLERSTPEAIEAIMDG MNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSKERLEALREEQMAKGEKPR YDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPIEFSNQELDDLIIRRTDGSPT YNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALKAPVPVYAHVSMINGDDGKKLSK RHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFTREEMIKYFTLNAVSKSASAFNT DKLLWLNHHYINALPPEYVATHLQWHIEQENIDTRNGPQLADLVKLLGERCKTLKEMAQS CRYFYEDFAEFDADAAKKHLRPVARQPLEVVRDKLAAITDWTAENVHHAIQATADELEVG MGKVGMPLRVAVTGAGQSPALDVTVHAIGKTRSIERINKALDFIAERENQQ >gi|299857058|gb|ADWS01000006.1| GENE 183 194835 - 195227 236 130 aa, chain - ## HITS:1 COG:no KEGG:JW2394 NR:ns ## KEGG: JW2394 # Name: yfeD # Def: predicted DNA-binding transcriptional regulator # Organism: E.coli_J # Pathway: not_defined # 1 130 1 130 130 250 100.0 1e-65 MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF LARLDIDESA >gi|299857058|gb|ADWS01000006.1| GENE 184 195229 - 195588 360 119 aa, chain - ## HITS:1 COG:no KEGG:SDY_2596 NR:ns ## KEGG: SDY_2596 # Name: yfeC # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 119 1 119 119 216 100.0 2e-55 MFKERMTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK >gi|299857058|gb|ADWS01000006.1| GENE 185 196208 - 198397 1492 729 aa, chain + ## HITS:1 COG:yfeA_3 KEGG:ns NR:ns ## COG: yfeA_3 COG2200 # Protein_GI_number: 16130327 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 472 729 1 258 258 524 100.0 1e-148 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL IGRPQPLAD Prediction of potential genes in microbial genomes Time: Sun May 15 21:58:22 2011 Seq name: gi|299857057|gb|ADWS01000007.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont6.1, whole genome shotgun sequence Length of sequence - 181692 bp Number of predicted genes - 196, with homology - 194 Number of transcription units - 84, operones - 40 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 464 - 1018 476 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 2 2 Op 1 . - CDS 994 - 1251 168 ## B21_03082 hypothetical protein 3 2 Op 2 8/0.000 - CDS 1248 - 2066 397 ## COG0169 Shikimate 5-dehydrogenase 4 2 Op 3 6/0.154 - CDS 2071 - 2643 359 ## COG0009 Putative translation factor (SUA5) 5 2 Op 4 7/0.038 - CDS 2648 - 3190 119 ## COG0551 Zn-finger domain associated with topoisomerase type I 6 2 Op 5 8/0.000 - CDS 3219 - 3692 625 ## COG2922 Uncharacterized protein conserved in bacteria 7 2 Op 6 . - CDS 3664 - 4788 427 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake - Prom 4925 - 4984 2.4 + Prom 4820 - 4879 3.5 8 3 Op 1 26/0.000 + CDS 4918 - 5427 560 ## COG0242 N-formylmethionyl-tRNA deformylase 9 3 Op 2 20/0.000 + CDS 5442 - 6389 953 ## COG0223 Methionyl-tRNA formyltransferase + Term 6406 - 6434 2.1 10 3 Op 3 8/0.000 + CDS 6462 - 7724 1036 ## COG0144 tRNA and rRNA cytosine-C5-methylases 11 3 Op 4 7/0.038 + CDS 7746 - 9122 1132 ## COG0569 K+ transport systems, NAD-binding component + Term 9124 - 9163 8.6 + Prom 9159 - 9218 6.9 12 4 Tu 1 . + CDS 9252 - 9662 425 ## COG1970 Large-conductance mechanosensitive channel - Term 9670 - 9722 12.7 13 5 Op 1 . - CDS 9933 - 10358 429 ## COG0789 Predicted transcriptional regulators 14 5 Op 2 . - CDS 10369 - 10737 234 ## SBO_3287 hypothetical protein - Prom 10766 - 10825 6.0 - Term 10798 - 10823 -0.5 15 6 Op 1 50/0.000 - CDS 10844 - 11227 636 ## PROTEIN SUPPORTED gi|15803821|ref|NP_289855.1| 50S ribosomal protein L17 16 6 Op 2 26/0.000 - CDS 11268 - 12257 1063 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 17 6 Op 3 36/0.000 - CDS 12283 - 12903 1038 ## PROTEIN SUPPORTED gi|15803823|ref|NP_289857.1| 30S ribosomal protein S4 18 6 Op 4 48/0.000 - CDS 12937 - 13326 669 ## PROTEIN SUPPORTED gi|15803824|ref|NP_289858.1| 30S ribosomal protein S11 19 6 Op 5 3/0.731 - CDS 13343 - 13699 586 ## PROTEIN SUPPORTED gi|15803825|ref|NP_289859.1| 30S ribosomal protein S13 - Prom 13745 - 13804 3.9 - Term 13775 - 13816 8.2 20 7 Op 1 . - CDS 13846 - 13962 198 ## PROTEIN SUPPORTED gi|15803826|ref|NP_289860.1| 50S ribosomal protein L36 21 7 Op 2 53/0.000 - CDS 13994 - 15325 1258 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 22 7 Op 3 48/0.000 - CDS 15333 - 15767 715 ## PROTEIN SUPPORTED gi|15803828|ref|NP_289862.1| 50S ribosomal protein L15 23 7 Op 4 50/0.000 - CDS 15771 - 15950 291 ## PROTEIN SUPPORTED gi|15803829|ref|NP_289863.1| 50S ribosomal protein L30 24 7 Op 5 56/0.000 - CDS 15954 - 16457 834 ## PROTEIN SUPPORTED gi|15803830|ref|NP_289864.1| 30S ribosomal protein S5 25 7 Op 6 46/0.000 - CDS 16472 - 16825 572 ## PROTEIN SUPPORTED gi|15803831|ref|NP_289865.1| 50S ribosomal protein L18 26 7 Op 7 55/0.000 - CDS 16835 - 17368 902 ## PROTEIN SUPPORTED gi|15803832|ref|NP_289866.1| 50S ribosomal protein L6 27 7 Op 8 50/0.000 - CDS 17381 - 17773 641 ## PROTEIN SUPPORTED gi|15803833|ref|NP_289867.1| 30S ribosomal protein S8 28 7 Op 9 50/0.000 - CDS 17807 - 18112 513 ## PROTEIN SUPPORTED gi|15803834|ref|NP_289868.1| 30S ribosomal protein S14 29 7 Op 10 48/0.000 - CDS 18127 - 18666 911 ## PROTEIN SUPPORTED gi|15803835|ref|NP_289869.1| 50S ribosomal protein L5 30 7 Op 11 57/0.000 - CDS 18681 - 18995 516 ## PROTEIN SUPPORTED gi|15803836|ref|NP_289870.1| 50S ribosomal protein L24 31 7 Op 12 50/0.000 - CDS 19006 - 19377 617 ## PROTEIN SUPPORTED gi|15803837|ref|NP_289871.1| 50S ribosomal protein L14 - Prom 19449 - 19508 7.1 - Term 19477 - 19520 10.3 32 8 Op 1 50/0.000 - CDS 19542 - 19796 431 ## PROTEIN SUPPORTED gi|15803838|ref|NP_289872.1| 30S ribosomal protein S17 33 8 Op 2 50/0.000 - CDS 19796 - 19987 301 ## PROTEIN SUPPORTED gi|15803839|ref|NP_289873.1| 50S ribosomal protein L29 34 8 Op 3 50/0.000 - CDS 19987 - 20397 694 ## PROTEIN SUPPORTED gi|15803840|ref|NP_289874.1| 50S ribosomal protein L16 35 8 Op 4 61/0.000 - CDS 20410 - 21111 1183 ## PROTEIN SUPPORTED gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 36 8 Op 5 59/0.000 - CDS 21129 - 21461 537 ## PROTEIN SUPPORTED gi|15803842|ref|NP_289876.1| 50S ribosomal protein L22 37 8 Op 6 60/0.000 - CDS 21476 - 21754 484 ## PROTEIN SUPPORTED gi|15803843|ref|NP_289877.1| 30S ribosomal protein S19 38 8 Op 7 61/0.000 - CDS 21771 - 22592 1438 ## PROTEIN SUPPORTED gi|15803844|ref|NP_289878.1| 50S ribosomal protein L2 39 8 Op 8 61/0.000 - CDS 22610 - 22912 490 ## PROTEIN SUPPORTED gi|15803845|ref|NP_289879.1| 50S ribosomal protein L23 40 8 Op 9 58/0.000 - CDS 22909 - 23514 992 ## PROTEIN SUPPORTED gi|15803846|ref|NP_289880.1| 50S ribosomal protein L4 41 8 Op 10 40/0.000 - CDS 23525 - 24154 1056 ## PROTEIN SUPPORTED gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 42 8 Op 11 . - CDS 24187 - 24498 513 ## PROTEIN SUPPORTED gi|15803848|ref|NP_289882.1| 30S ribosomal protein S10 - Prom 24669 - 24728 5.3 + Prom 24469 - 24528 2.2 43 9 Tu 1 . + CDS 24561 - 24692 62 ## + Prom 24715 - 24774 2.6 44 10 Tu 1 . + CDS 24877 - 25344 332 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases + Term 25583 - 25627 4.9 45 11 Op 1 9/0.000 - CDS 25341 - 25817 575 ## COG2193 Bacterioferritin (cytochrome b1) 46 11 Op 2 . - CDS 25890 - 26084 170 ## COG2906 Bacterioferritin-associated ferredoxin - Prom 26105 - 26164 5.7 + Prom 25755 - 25814 5.3 47 12 Tu 1 . + CDS 26019 - 26165 61 ## + Term 26222 - 26249 1.5 - Term 26210 - 26237 1.5 48 13 Op 1 30/0.000 - CDS 26267 - 27451 1634 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 49 13 Op 2 51/0.000 - CDS 27522 - 29636 2210 ## COG0480 Translation elongation factors (GTPases) - Prom 29660 - 29719 1.6 - Term 29672 - 29707 3.1 50 13 Op 3 56/0.000 - CDS 29733 - 30203 777 ## PROTEIN SUPPORTED gi|15803854|ref|NP_289888.1| 30S ribosomal protein S7 - Prom 30232 - 30291 2.1 51 13 Op 4 7/0.038 - CDS 30300 - 30734 744 ## PROTEIN SUPPORTED gi|226956878|ref|YP_002807671.1| 30S ribosomal subunit protein S12 52 13 Op 5 10/0.000 - CDS 30800 - 31087 293 ## COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur 53 13 Op 6 13/0.000 - CDS 31095 - 31454 234 ## COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur 54 13 Op 7 6/0.154 - CDS 31454 - 31840 390 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction 55 13 Op 8 6/0.154 - CDS 31840 - 32562 633 ## COG2964 Uncharacterized protein conserved in bacteria - Prom 32664 - 32723 5.5 - Term 32682 - 32721 9.8 56 14 Tu 1 . - CDS 32729 - 33541 1005 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 33633 - 33692 3.4 + Prom 33595 - 33654 3.3 57 15 Tu 1 . + CDS 33762 - 33980 328 ## COG2900 Uncharacterized protein conserved in bacteria + Term 33984 - 34032 10.2 - Term 33979 - 34007 2.1 58 16 Tu 1 4/0.615 - CDS 34029 - 34619 771 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 - Prom 34648 - 34707 3.9 - Term 34635 - 34676 0.7 59 17 Op 1 3/0.731 - CDS 34714 - 34914 207 ## COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 60 17 Op 2 7/0.038 - CDS 34924 - 36729 1053 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 61 17 Op 3 . - CDS 36729 - 37280 449 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 37362 - 37421 4.7 + Prom 37248 - 37307 3.4 62 18 Op 1 3/0.731 + CDS 37411 - 39324 2425 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 63 18 Op 2 5/0.308 + CDS 39417 - 40346 792 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold 64 18 Op 3 6/0.154 + CDS 40340 - 40558 344 ## COG3089 Uncharacterized protein conserved in bacteria 65 19 Tu 1 . + CDS 40612 - 41481 928 ## COG3954 Phosphoribulokinase + Term 41557 - 41588 -0.8 - Term 41470 - 41525 2.7 66 20 Tu 1 . - CDS 41536 - 41940 421 ## COG1765 Predicted redox protein, regulator of disulfide bond formation + Prom 42033 - 42092 1.8 67 21 Op 1 4/0.615 + CDS 42242 - 42874 871 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 42886 - 42923 8.2 68 21 Op 2 . + CDS 42925 - 45015 1757 ## COG1289 Predicted membrane protein - Term 45016 - 45057 3.2 69 22 Op 1 5/0.308 - CDS 45082 - 46302 1282 ## COG4992 Ornithine/acetylornithine aminotransferase - Prom 46327 - 46386 6.9 70 22 Op 2 4/0.615 - CDS 46388 - 46951 484 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 71 22 Op 3 . - CDS 46983 - 47585 726 ## COG2184 Protein involved in cell division 72 22 Op 4 . - CDS 47575 - 47742 134 ## Z4723 hypothetical protein - Prom 47769 - 47828 2.9 - Term 47804 - 47837 6.8 73 23 Tu 1 . - CDS 47847 - 48419 502 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 48498 - 48557 5.8 + Prom 48524 - 48583 7.3 74 24 Tu 1 . + CDS 48690 - 49871 1206 ## COG0477 Permeases of the major facilitator superfamily + Term 49880 - 49918 7.0 + Prom 49981 - 50040 5.0 75 25 Op 1 14/0.000 + CDS 50133 - 52676 2967 ## COG1251 NAD(P)H-nitrite reductase 76 25 Op 2 3/0.731 + CDS 52673 - 52999 470 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases + Term 53009 - 53039 3.4 + Prom 53043 - 53102 11.5 77 26 Op 1 3/0.731 + CDS 53126 - 53932 1022 ## COG2116 Formate/nitrite family of transporters 78 26 Op 2 . + CDS 53951 - 55324 1350 ## COG0007 Uroporphyrinogen-III methylase + Term 55334 - 55363 2.1 + Prom 55478 - 55537 7.6 79 27 Tu 1 . + CDS 55571 - 55738 262 ## LF82_3285 uncharacterized protein YhfL + Term 55780 - 55815 5.5 + Prom 55901 - 55960 4.9 80 28 Op 1 2/0.808 + CDS 56033 - 57370 1348 ## COG0531 Amino acid transporters 81 28 Op 2 2/0.808 + CDS 57391 - 58413 1234 ## COG2222 Predicted phosphosugar isomerases 82 28 Op 3 5/0.308 + CDS 58463 - 59293 903 ## COG1082 Sugar phosphate isomerases/epimerases 83 28 Op 4 1/0.885 + CDS 59290 - 60075 845 ## COG0524 Sugar kinases, ribokinase family + Term 60082 - 60123 9.5 + Prom 60090 - 60149 3.6 84 29 Tu 1 . + CDS 60175 - 60906 625 ## COG2188 Transcriptional regulators + Term 60919 - 60972 11.2 - Term 60913 - 60955 13.2 85 30 Op 1 . - CDS 61058 - 62143 924 ## ECO111_4185 hypothetical protein 86 30 Op 2 . - CDS 62155 - 63459 1401 ## ECO103_4095 hypothetical protein 87 30 Op 3 . - CDS 63471 - 63824 525 ## SBO_3365 hypothetical protein 88 30 Op 4 1/0.885 - CDS 63835 - 64713 1088 ## COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold 89 30 Op 5 2/0.808 - CDS 64710 - 65936 1218 ## COG1015 Phosphopentomutase 90 30 Op 6 . - CDS 65936 - 67099 1241 ## COG3457 Predicted amino acid racemase - Prom 67119 - 67178 1.5 91 31 Op 1 . - CDS 67183 - 67545 371 ## SSON_3513 hypothetical protein 92 31 Op 2 . - CDS 67562 - 68467 807 ## ECO103_4101 hypothetical protein - Prom 68574 - 68633 4.7 - Term 68577 - 68610 3.8 93 32 Tu 1 . - CDS 68736 - 69740 1278 ## COG0180 Tryptophanyl-tRNA synthetase 94 33 Op 1 9/0.000 - CDS 69856 - 70491 846 ## COG0546 Predicted phosphatases 95 33 Op 2 6/0.154 - CDS 70484 - 71161 785 ## COG0036 Pentose-5-phosphate-3-epimerase 96 33 Op 3 6/0.154 - CDS 71179 - 72015 556 ## COG0338 Site-specific DNA methylase - Term 72043 - 72081 -0.9 97 34 Tu 1 7/0.038 - CDS 72122 - 73408 1086 ## COG3266 Uncharacterized protein conserved in bacteria - Term 73454 - 73484 2.7 98 35 Op 1 20/0.000 - CDS 73500 - 74588 922 ## COG0337 3-dehydroquinate synthetase 99 35 Op 2 8/0.000 - CDS 74645 - 75166 572 ## COG0703 Shikimate kinase - Prom 75269 - 75328 3.9 - Term 75454 - 75487 0.6 100 35 Op 3 . - CDS 75567 - 76805 985 ## COG4796 Type II secretory pathway, component HofQ 101 35 Op 4 . - CDS 76717 - 77121 240 ## SDY_3687 hypothetical protein 102 35 Op 5 . - CDS 77111 - 77551 168 ## B21_03197 hypothetical protein 103 35 Op 6 . - CDS 77535 - 78074 257 ## COG3166 Tfp pilus assembly protein PilN 104 35 Op 7 . - CDS 78074 - 78853 675 ## B21_03199 hypothetical protein - Prom 78926 - 78985 2.0 + Prom 78890 - 78949 3.4 105 36 Tu 1 . + CDS 78973 - 81525 2701 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein + Term 81544 - 81581 1.0 - Term 81640 - 81676 0.8 106 37 Tu 1 . - CDS 81690 - 82250 612 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 82333 - 82392 7.0 + Prom 82292 - 82351 5.3 107 38 Op 1 . + CDS 82570 - 84705 1745 ## EcE24377A_3870 hypothetical protein + Term 84710 - 84756 10.1 108 38 Op 2 4/0.615 + CDS 84770 - 85438 843 ## COG1011 Predicted hydrolase (HAD superfamily) 109 38 Op 3 3/0.731 + CDS 85449 - 85850 434 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 110 38 Op 4 . + CDS 85875 - 86753 1075 ## COG1281 Disulfide bond chaperones of the HSP33 family + Term 86762 - 86797 7.4 111 39 Tu 1 . - CDS 86888 - 88612 1449 ## ECO111_4211 putative inner membrane protein - Prom 88834 - 88893 5.7 + Prom 88776 - 88835 4.0 112 40 Tu 1 . + CDS 88991 - 90613 1974 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) + Term 90631 - 90670 8.4 + Prom 90647 - 90706 5.8 113 41 Op 1 . + CDS 90730 - 91047 145 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 114 41 Op 2 . + CDS 91106 - 91402 182 ## EcSMS35_3684 hypothetical protein + Term 91406 - 91439 -0.4 - Term 91387 - 91432 7.5 115 42 Op 1 40/0.000 - CDS 91434 - 92786 1287 ## COG0642 Signal transduction histidine kinase 116 42 Op 2 . - CDS 92783 - 93502 879 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 93607 - 93666 11.2 + Prom 93589 - 93648 4.9 117 43 Op 1 1/0.885 + CDS 93730 - 94206 616 ## COG0782 Transcription elongation factor + Prom 94211 - 94270 2.0 118 43 Op 2 4/0.615 + CDS 94303 - 96624 1644 ## PROTEIN SUPPORTED gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein + Term 96704 - 96738 6.0 + Prom 94211 - 94270 2.0 119 43 Op 3 4/0.615 + CDS 94303 - 96624 201 ## PROTEIN SUPPORTED gi|241896285|ref|ZP_04783581.1| ribosomal protein S1 + Term 96704 - 96738 6.0 + Prom 96789 - 96848 4.8 120 44 Op 1 22/0.000 + CDS 97062 - 97289 261 ## COG1918 Fe2+ transport system protein A 121 44 Op 2 . + CDS 97306 - 99627 2666 ## COG0370 Fe2+ transport system protein B 122 44 Op 3 . + CDS 99627 - 99863 180 ## SDY_3666 hypothetical protein + Term 99890 - 99927 6.1 + Prom 99890 - 99949 2.4 123 45 Tu 1 . + CDS 100066 - 100944 723 ## COG5464 Uncharacterized conserved protein 124 46 Tu 1 . - CDS 100973 - 101743 591 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 101774 - 101833 2.9 125 47 Op 1 5/0.308 + CDS 101781 - 102464 239 ## COG1040 Predicted amidophosphoribosyltransferases 126 47 Op 2 3/0.731 + CDS 102523 - 103098 749 ## COG0694 Thioredoxin-like proteins and domains + Term 103163 - 103198 0.7 + Prom 103348 - 103407 4.0 127 48 Tu 1 . + CDS 103459 - 104775 1672 ## COG2610 H+/gluconate symporter and related permeases + Term 104898 - 104941 1.6 - Term 104769 - 104811 9.1 128 49 Op 1 7/0.038 - CDS 104820 - 106904 1965 ## COG1640 4-alpha-glucanotransferase 129 49 Op 2 . - CDS 106914 - 109307 2739 ## COG0058 Glucan phosphorylase - Prom 109427 - 109486 2.7 + Prom 109835 - 109894 6.1 130 50 Tu 1 . + CDS 109919 - 112624 2339 ## COG2909 ATP-dependent transcriptional regulator + Term 112628 - 112669 -1.0 131 51 Op 1 3/0.731 - CDS 112667 - 113674 851 ## COG0430 RNA 3'-terminal phosphate cyclase 132 51 Op 2 . - CDS 113687 - 114913 1292 ## COG1690 Uncharacterized conserved protein - Prom 114976 - 115035 5.2 + Prom 114946 - 115005 4.4 133 52 Tu 1 . + CDS 115102 - 116700 1292 ## COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain 134 53 Op 1 6/0.154 - CDS 116682 - 117440 812 ## COG1349 Transcriptional regulators of sugar metabolism 135 53 Op 2 4/0.615 - CDS 117457 - 118281 842 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 136 53 Op 3 . - CDS 118332 - 118658 493 ## COG0607 Rhodanese-related sulfurtransferase - Prom 118760 - 118819 4.6 + Prom 118746 - 118805 5.7 137 54 Tu 1 . + CDS 118848 - 120353 1665 ## COG0578 Glycerol-3-phosphate dehydrogenase + Term 120361 - 120396 6.1 138 55 Op 1 . - CDS 120405 - 121010 49 ## ECO103_4145 hypothetical protein 139 55 Op 2 . - CDS 121013 - 121780 318 ## EC55989_3835 hypothetical protein 140 55 Op 3 . - CDS 121783 - 122493 324 ## EC55989_3836 hypothetical protein 141 55 Op 4 2/0.808 - CDS 122509 - 124014 820 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 124037 - 124096 2.3 - Term 124091 - 124126 4.9 142 56 Op 1 10/0.000 - CDS 124142 - 126589 2753 ## COG0058 Glucan phosphorylase 143 56 Op 2 17/0.000 - CDS 126608 - 128041 1270 ## COG0297 Glycogen synthase 144 56 Op 3 7/0.038 - CDS 128041 - 129336 1233 ## COG0448 ADP-glucose pyrophosphorylase 145 56 Op 4 9/0.000 - CDS 129354 - 131327 1492 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 146 56 Op 5 4/0.615 - CDS 131324 - 133510 2487 ## COG0296 1,4-alpha-glucan branching enzyme - Prom 133665 - 133724 3.1 - Term 133735 - 133764 1.1 147 57 Tu 1 . - CDS 133783 - 134886 1125 ## COG0136 Aspartate-semialdehyde dehydrogenase - Prom 135052 - 135111 3.7 + Prom 134857 - 134916 3.4 148 58 Tu 1 . + CDS 135079 - 135672 642 ## COG2095 Multiple antibiotic transporter - Term 135684 - 135719 6.1 149 59 Op 1 4/0.615 - CDS 135729 - 137006 1462 ## COG2610 H+/gluconate symporter and related permeases - Term 137007 - 137044 3.9 150 59 Op 2 1/0.885 - CDS 137073 - 137561 513 ## COG3265 Gluconate kinase - Prom 137624 - 137683 1.7 151 60 Tu 1 . - CDS 137739 - 138734 1041 ## COG1609 Transcriptional regulators - Prom 138806 - 138865 4.4 - Term 138908 - 138937 0.4 152 61 Tu 1 5/0.308 - CDS 138958 - 139653 913 ## COG1741 Pirin-related protein - Prom 139704 - 139763 4.5 - Term 139717 - 139769 3.6 153 62 Tu 1 . - CDS 139776 - 140813 1128 ## COG0673 Predicted dehydrogenases and related proteins - Prom 141024 - 141083 4.4 154 63 Tu 1 . + CDS 140715 - 140912 146 ## ECS88_3838 hypothetical protein + Prom 141057 - 141116 3.2 155 64 Tu 1 . + CDS 141146 - 141634 347 ## PROTEIN SUPPORTED gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase + Term 141664 - 141700 -1.0 + Prom 141734 - 141793 16.4 156 65 Op 1 . + CDS 141868 - 143046 141 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 157 65 Op 2 . + CDS 143082 - 143537 218 ## ECIAI1_3588 hypothetical protein + Prom 143550 - 143609 1.7 158 65 Op 3 . + CDS 143632 - 143787 69 ## EC55989_3853 hypothetical protein + Prom 143900 - 143959 3.4 159 66 Tu 1 . + CDS 143987 - 144271 245 ## B21_03248 hypothetical protein - Term 144267 - 144300 5.4 160 67 Tu 1 . - CDS 144309 - 146051 1851 ## COG0405 Gamma-glutamyltransferase - Prom 146138 - 146197 2.2 + Prom 146089 - 146148 3.7 161 68 Tu 1 . + CDS 146171 - 146611 337 ## S4297 hypothetical protein + Term 146659 - 146702 7.0 - Term 146533 - 146576 8.1 162 69 Op 1 4/0.615 - CDS 146598 - 147341 821 ## COG0584 Glycerophosphoryl diester phosphodiesterase 163 69 Op 2 21/0.000 - CDS 147338 - 148408 1384 ## COG3839 ABC-type sugar transport systems, ATPase components 164 69 Op 3 38/0.000 - CDS 148410 - 149255 868 ## COG0395 ABC-type sugar transport system, permease component 165 69 Op 4 35/0.000 - CDS 149252 - 150139 941 ## COG1175 ABC-type sugar transport systems, permease components - Prom 150176 - 150235 2.6 166 69 Op 5 . - CDS 150237 - 151553 1711 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 151629 - 151688 7.3 - Term 151833 - 151875 -0.8 167 70 Op 1 18/0.000 - CDS 151949 - 152662 268 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 168 70 Op 2 19/0.000 - CDS 152664 - 153431 258 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 169 70 Op 3 24/0.000 - CDS 153428 - 154705 1471 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 170 70 Op 4 20/0.000 - CDS 154702 - 155628 1260 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 171 70 Op 5 . - CDS 155676 - 156785 1313 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 156805 - 156864 2.1 + Prom 157111 - 157170 5.4 172 71 Tu 1 . + CDS 157209 - 157592 391 ## ECO103_4179 hypothetical protein + Term 157764 - 157795 2.1 - Term 157621 - 157657 2.4 173 72 Tu 1 . - CDS 157791 - 158894 1411 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 159030 - 159089 5.4 - Term 159107 - 159148 6.3 174 73 Tu 1 . - CDS 159165 - 160019 1031 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Prom 160116 - 160175 6.2 - Term 160181 - 160220 2.1 175 74 Op 1 28/0.000 - CDS 160264 - 161322 1009 ## COG2177 Cell division protein 176 74 Op 2 9/0.000 - CDS 161315 - 161983 348 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 177 74 Op 3 . - CDS 161986 - 163482 748 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 - Prom 163554 - 163613 5.1 + Prom 163443 - 163502 3.2 178 75 Op 1 6/0.154 + CDS 163632 - 164228 190 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 179 75 Op 2 . + CDS 164218 - 164487 365 ## COG3776 Predicted membrane protein - Term 164377 - 164409 -1.0 180 76 Tu 1 . - CDS 164490 - 164849 381 ## B21_03269 hypothetical protein - Prom 164873 - 164932 3.4 + Prom 164818 - 164877 3.0 181 77 Op 1 5/0.308 + CDS 164990 - 165616 679 ## COG3714 Predicted membrane protein + Term 165627 - 165658 3.4 182 77 Op 2 . + CDS 165690 - 167888 2280 ## COG2217 Cation transport ATPase - Term 167876 - 167925 7.2 183 78 Tu 1 . - CDS 167990 - 168235 326 ## COG0425 Predicted redox protein, regulator of disulfide bond formation - Prom 168259 - 168318 6.5 + Prom 168335 - 168394 4.2 184 79 Op 1 . + CDS 168456 - 169121 641 ## COG1738 Uncharacterized conserved protein 185 79 Op 2 . + CDS 169194 - 169751 742 ## ECO103_4192 hypothetical protein + Term 169765 - 169812 7.6 - Term 169664 - 169708 5.1 186 80 Tu 1 . - CDS 169755 - 170972 1251 ## COG0477 Permeases of the major facilitator superfamily - Prom 170998 - 171057 2.2 + Prom 171024 - 171083 2.9 187 81 Op 1 1/0.885 + CDS 171104 - 172153 985 ## COG0628 Predicted permease 188 81 Op 2 . + CDS 172208 - 172795 503 ## COG2091 Phosphopantetheinyl transferase + Term 172841 - 172881 3.0 - Term 172579 - 172615 2.0 189 82 Tu 1 . - CDS 172705 - 172881 78 ## UTI89_C3992 hypothetical protein + Prom 172817 - 172876 4.7 190 83 Op 1 38/0.000 + CDS 172906 - 174480 1726 ## COG0747 ABC-type dipeptide transport system, periplasmic component 191 83 Op 2 49/0.000 + CDS 174480 - 175424 254 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 192 83 Op 3 44/0.000 + CDS 175421 - 176254 1076 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 193 83 Op 4 17/0.000 + CDS 176254 - 177018 357 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 194 83 Op 5 3/0.731 + CDS 177015 - 177821 405 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 195 83 Op 6 . + CDS 177827 - 178228 447 ## COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain + Prom 178286 - 178345 3.6 196 84 Tu 1 . + CDS 178431 - 181692 2364 ## COG3209 Rhs family protein Predicted protein(s) >gi|299857057|gb|ADWS01000007.1| GENE 1 464 - 1018 476 184 aa, chain + ## HITS:1 COG:ECs4145 KEGG:ns NR:ns ## COG: ECs4145 COG0663 # Protein_GI_number: 15833399 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli O157:H7 # 1 184 73 256 256 385 100.0 1e-107 MSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNI QDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVED DVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGN QTQP >gi|299857057|gb|ADWS01000007.1| GENE 2 994 - 1251 168 85 aa, chain - ## HITS:1 COG:no KEGG:B21_03082 NR:ns ## KEGG: B21_03082 # Name: yrdB # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 85 1 85 85 155 100.0 4e-37 MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRFTGDTPEQWLASFRQHR WDLEEEAENLIQEQSEDDQGWVWLP >gi|299857057|gb|ADWS01000007.1| GENE 3 1248 - 2066 397 272 aa, chain - ## HITS:1 COG:aroE KEGG:ns NR:ns ## COG: aroE COG0169 # Protein_GI_number: 16131162 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Escherichia coli K12 # 1 272 1 272 272 545 98.0 1e-155 METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFRAGGKGANV TVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLLGDNTDGIGLLSDLERLSFIRPGL RILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALGMDELEGHE FDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGM LVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA >gi|299857057|gb|ADWS01000007.1| GENE 4 2071 - 2643 359 190 aa, chain - ## HITS:1 COG:ECs4148 KEGG:ns NR:ns ## COG: ECs4148 COG0009 # Protein_GI_number: 15833402 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 373 99.0 1e-103 MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLIL IAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTD HPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRD ALTGELFRQG >gi|299857057|gb|ADWS01000007.1| GENE 5 2648 - 3190 119 180 aa, chain - ## HITS:1 COG:ZyrdD KEGG:ns NR:ns ## COG: ZyrdD COG0551 # Protein_GI_number: 15803811 # Func_class: L Replication, recombination and repair # Function: Zn-finger domain associated with topoisomerase type I # Organism: Escherichia coli O157:H7 EDL933 # 9 180 1 172 172 325 98.0 2e-89 MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLE GQVCPACGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDETAITCPQCRTGHLVQRRSR YGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKTAQGVKHFCASKQCGKPVSAE >gi|299857057|gb|ADWS01000007.1| GENE 6 3219 - 3692 625 157 aa, chain - ## HITS:1 COG:smg KEGG:ns NR:ns ## COG: smg COG2922 # Protein_GI_number: 16131165 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 157 1 157 157 271 99.0 5e-73 MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNALLWLEKLADYQEGLAEP MQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFEL DDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH >gi|299857057|gb|ADWS01000007.1| GENE 7 3664 - 4788 427 374 aa, chain - ## HITS:1 COG:smf KEGG:ns NR:ns ## COG: smf COG0758 # Protein_GI_number: 16132235 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Escherichia coli K12 # 1 374 1 374 374 738 98.0 0 MVDTEIWLRLMSISSLYGDDMVRIAHWLAKQSQIDAVGLQQTGLTLRQAQRFLSFPRKSI ESSLCWLEQPNHHLIPADSEFYPPQLLVTTDYPGALFVEGELHALHSFQLAVVGSRAHSW YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA RLAASLLEHGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR LRRACHVRRTNVFV >gi|299857057|gb|ADWS01000007.1| GENE 8 4918 - 5427 560 169 aa, chain + ## HITS:1 COG:ECs4152 KEGG:ns NR:ns ## COG: ECs4152 COG0242 # Protein_GI_number: 15833406 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 291 100.0 3e-79 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA >gi|299857057|gb|ADWS01000007.1| GENE 9 5442 - 6389 953 315 aa, chain + ## HITS:1 COG:ECs4153 KEGG:ns NR:ns ## COG: ECs4153 COG0223 # Protein_GI_number: 15833407 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Escherichia coli O157:H7 # 1 315 1 315 315 612 99.0 1e-175 MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEKG LPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRG AAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGL ITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLE IEGQPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQDL LNSRREWFVPGNRLV >gi|299857057|gb|ADWS01000007.1| GENE 10 6462 - 7724 1036 420 aa, chain + ## HITS:1 COG:sun KEGG:ns NR:ns ## COG: sun COG0144 # Protein_GI_number: 16131168 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Escherichia coli K12 # 1 420 10 429 429 840 99.0 0 MAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARP MTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ EELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNRTHHSRDSWL ALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEH ILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGT LVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK >gi|299857057|gb|ADWS01000007.1| GENE 11 7746 - 9122 1132 458 aa, chain + ## HITS:1 COG:ECs4155 KEGG:ns NR:ns ## COG: ECs4155 COG0569 # Protein_GI_number: 15833409 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Escherichia coli O157:H7 # 1 458 1 458 458 871 100.0 0 MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFDLRVVQGHGSHPRVLRE AGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSPDYVRDADKLFHSDAVPID HLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKAYYGGPLIGNALSTMREHMPH IDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHIRAVMSELQRLEKPYKRIMLVGG GNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQNTIVFFGDASDQELLAEEHIDQVDL FIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRAYVDLVQGSVIDIAISPQQATISALLS HVRKADIVGVSSLRRGVAEAIEAVAHGDESTSRVVGRVIDEIKLPPGTIIGAVVRGNDVM IANDNLRIEQGDHVIMFLTDKKFITDVERLFQPSPFFL >gi|299857057|gb|ADWS01000007.1| GENE 12 9252 - 9662 425 136 aa, chain + ## HITS:1 COG:ECs4156 KEGG:ns NR:ns ## COG: ECs4156 COG1970 # Protein_GI_number: 15833410 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 243 100.0 5e-65 MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAVT LRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKLNRKKEEPAAAPAPTKEEV LLTEIRDLLKEQNNRS >gi|299857057|gb|ADWS01000007.1| GENE 13 9933 - 10358 429 141 aa, chain - ## HITS:1 COG:ECs4157 KEGG:ns NR:ns ## COG: ECs4157 COG0789 # Protein_GI_number: 15833411 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 247 100.0 4e-66 MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFS LESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHS SVYCSILEALEQGASGVKSGC >gi|299857057|gb|ADWS01000007.1| GENE 14 10369 - 10737 234 122 aa, chain - ## HITS:1 COG:no KEGG:SBO_3287 NR:ns ## KEGG: SBO_3287 # Name: yhdN # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 122 1 122 122 223 99.0 1e-57 MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL EQRREAIQLLDILRGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKIN DN >gi|299857057|gb|ADWS01000007.1| GENE 15 10844 - 11227 636 127 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803821|ref|NP_289855.1| 50S ribosomal protein L17 [Escherichia coli O157:H7 EDL933] # 1 127 1 127 127 249 100 6e-65 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSV ANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSE KAEAAAE >gi|299857057|gb|ADWS01000007.1| GENE 16 11268 - 12257 1063 329 aa, chain - ## HITS:1 COG:ECs4160 KEGG:ns NR:ns ## COG: ECs4160 COG0202 # Protein_GI_number: 15833414 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 613 100.0 1e-175 MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPV ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL TEIKDVLASRGLSLGMRLENWPPASIADE >gi|299857057|gb|ADWS01000007.1| GENE 17 12283 - 12903 1038 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803823|ref|NP_289857.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 EDL933] # 1 206 1 206 206 404 100 1e-111 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQK VRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSH KAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEG TFKRKPERSDLSADINEHLIVELYSK >gi|299857057|gb|ADWS01000007.1| GENE 18 12937 - 13326 669 129 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803824|ref|NP_289858.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 EDL933] # 1 129 1 129 129 262 100 9e-69 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG CRPPKKRRV >gi|299857057|gb|ADWS01000007.1| GENE 19 13343 - 13699 586 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803825|ref|NP_289859.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 EDL933] # 1 118 1 118 118 230 99 4e-59 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK >gi|299857057|gb|ADWS01000007.1| GENE 20 13846 - 13962 198 38 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803826|ref|NP_289860.1| 50S ribosomal protein L36 [Escherichia coli O157:H7 EDL933] # 1 38 1 38 38 80 100 4e-14 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG >gi|299857057|gb|ADWS01000007.1| GENE 21 13994 - 15325 1258 443 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 12 440 16 444 447 489 56 1e-137 MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTI IEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYT RYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITE RGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERG QRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGW NWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGE QTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQV QTLMMSSQYESALKKANLKGYGR >gi|299857057|gb|ADWS01000007.1| GENE 22 15333 - 15767 715 144 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803828|ref|NP_289862.1| 50S ribosomal protein L15 [Escherichia coli O157:H7 EDL933] # 1 144 1 144 144 280 100 4e-74 MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR LPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPV TVRGLRVTKGARAAIEAAGGKIEE >gi|299857057|gb|ADWS01000007.1| GENE 23 15771 - 15950 291 59 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803829|ref|NP_289863.1| 50S ribosomal protein L30 [Escherichia coli O157:H7 EDL933] # 1 59 1 59 59 116 100 6e-25 MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKVEE >gi|299857057|gb|ADWS01000007.1| GENE 24 15954 - 16457 834 167 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803830|ref|NP_289864.1| 30S ribosomal protein S5 [Escherichia coli O157:H7 EDL933] # 1 167 1 167 167 325 100 7e-88 MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAI QKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGV HNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK >gi|299857057|gb|ADWS01000007.1| GENE 25 16472 - 16825 572 117 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803831|ref|NP_289865.1| 50S ribosomal protein L18 [Escherichia coli O157:H7 EDL933] # 1 117 1 117 117 224 100 2e-57 MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAE QLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF >gi|299857057|gb|ADWS01000007.1| GENE 26 16835 - 17368 902 177 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803832|ref|NP_289866.1| 50S ribosomal protein L6 [Escherichia coli O157:H7 EDL933] # 1 177 1 177 177 352 100 9e-96 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYAD GWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAG ITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVRTKEAKKK >gi|299857057|gb|ADWS01000007.1| GENE 27 17381 - 17773 641 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803833|ref|NP_289867.1| 30S ribosomal protein S8 [Escherichia coli O157:H7 EDL933] # 1 130 1 130 130 251 100 2e-65 MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELE LTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAG LGGEIICYVA >gi|299857057|gb|ADWS01000007.1| GENE 28 17807 - 18112 513 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803834|ref|NP_289868.1| 30S ribosomal protein S14 [Escherichia coli O157:H7 EDL933] # 1 101 1 101 101 202 100 1e-50 MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQ RNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW >gi|299857057|gb|ADWS01000007.1| GENE 29 18127 - 18666 911 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803835|ref|NP_289869.1| 50S ribosomal protein L5 [Escherichia coli O157:H7 EDL933] # 1 179 1 179 179 355 100 8e-97 MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK >gi|299857057|gb|ADWS01000007.1| GENE 30 18681 - 18995 516 104 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803836|ref|NP_289870.1| 50S ribosomal protein L24 [Escherichia coli O157:H7 EDL933] # 1 104 1 104 104 203 100 5e-51 MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPALNQPGGIVE KEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSETIK >gi|299857057|gb|ADWS01000007.1| GENE 31 19006 - 19377 617 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803837|ref|NP_289871.1| 50S ribosomal protein L14 [Escherichia coli O157:H7 EDL933] # 1 123 1 123 123 242 100 1e-62 MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKA VVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAP EVL >gi|299857057|gb|ADWS01000007.1| GENE 32 19542 - 19796 431 84 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803838|ref|NP_289872.1| 30S ribosomal protein S17 [Escherichia coli O157:H7 EDL933] # 1 84 1 84 84 170 100 4e-41 MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVE IRECRPLSKTKSWTLVRVVEKAVL >gi|299857057|gb|ADWS01000007.1| GENE 33 19796 - 19987 301 63 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803839|ref|NP_289873.1| 50S ribosomal protein L29 [Escherichia coli O157:H7 EDL933] # 1 63 1 63 63 120 100 4e-26 MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEK AGA >gi|299857057|gb|ADWS01000007.1| GENE 34 19987 - 20397 694 136 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803840|ref|NP_289874.1| 50S ribosomal protein L16 [Escherichia coli O157:H7 EDL933] # 1 136 1 136 136 271 100 1e-71 MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQ GKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLA AAKLPIKTTFVTKTVM >gi|299857057|gb|ADWS01000007.1| GENE 35 20410 - 21111 1183 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. Sakai] # 1 233 1 233 233 460 100 1e-128 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK >gi|299857057|gb|ADWS01000007.1| GENE 36 21129 - 21461 537 110 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803842|ref|NP_289876.1| 50S ribosomal protein L22 [Escherichia coli O157:H7 EDL933] # 1 110 1 110 110 211 100 2e-53 METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEH NDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR >gi|299857057|gb|ADWS01000007.1| GENE 37 21476 - 21754 484 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803843|ref|NP_289877.1| 30S ribosomal protein S19 [Escherichia coli O157:H7 EDL933] # 1 92 1 92 92 191 100 3e-47 MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPV FVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK >gi|299857057|gb|ADWS01000007.1| GENE 38 21771 - 22592 1438 273 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803844|ref|NP_289878.1| 50S ribosomal protein L2 [Escherichia coli O157:H7 EDL933] # 1 273 1 273 273 558 100 1e-158 MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQ AYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGV DAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGE MRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF GKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK >gi|299857057|gb|ADWS01000007.1| GENE 39 22610 - 22912 490 100 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803845|ref|NP_289879.1| 50S ribosomal protein L23 [Escherichia coli O157:H7 EDL933] # 1 100 1 100 100 193 100 5e-48 MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNT LVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE >gi|299857057|gb|ADWS01000007.1| GENE 40 22909 - 23514 992 201 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803846|ref|NP_289880.1| 50S ribosomal protein L4 [Escherichia coli O157:H7 EDL933] # 1 201 1 201 201 386 100 1e-106 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL IAFDKVVMTADAVKQVEEMLA >gi|299857057|gb|ADWS01000007.1| GENE 41 23525 - 24154 1056 209 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 EDL933] # 1 209 1 209 209 411 100 1e-113 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV TKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAG TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV DAERNLLLVKGAVPGATGSDLIVKPAVKA >gi|299857057|gb|ADWS01000007.1| GENE 42 24187 - 24498 513 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803848|ref|NP_289882.1| 30S ribosomal protein S10 [Escherichia coli O157:H7 EDL933] # 1 103 1 103 103 202 100 1e-50 MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKD ARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG >gi|299857057|gb|ADWS01000007.1| GENE 43 24561 - 24692 62 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGECNRSYVAPRLGALLGSQIRLTEVQIEPAVNYDKPAHYTQI >gi|299857057|gb|ADWS01000007.1| GENE 44 24877 - 25344 332 155 aa, chain + ## HITS:1 COG:ECs4188 KEGG:ns NR:ns ## COG: ECs4188 COG1989 # Protein_GI_number: 15833442 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 266 93.0 8e-72 MDATLPFLILYACLSVLLFLWDAKHGLLPDRFTCPLLWSGLLFSQVCNPDGLADALWGAI IGYGTFAVIYWGYRILRHKEGLGYGDVKFLAALGAWHTWTFLPRLVFLAASFACGAVVVG LLMRGKESLKNPLPFGPFLAAAGFVVGWDSLLAGR >gi|299857057|gb|ADWS01000007.1| GENE 45 25341 - 25817 575 158 aa, chain - ## HITS:1 COG:ECs4189 KEGG:ns NR:ns ## COG: ECs4189 COG2193 # Protein_GI_number: 15833443 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 275 99.0 2e-74 MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLMRLNDVEYHESIDEMKHADKYIE RILFLEGIPNLQDLGKLGIGEDVEEMLQSDLRLELEGAKDLREAIAYADSVHDYVSRDMM IEILADEEGHIDWLETELDLIGKIGLQNYLQSQIKVKD >gi|299857057|gb|ADWS01000007.1| GENE 46 25890 - 26084 170 64 aa, chain - ## HITS:1 COG:ZyheA KEGG:ns NR:ns ## COG: ZyheA COG2906 # Protein_GI_number: 15803851 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin-associated ferredoxin # Organism: Escherichia coli O157:H7 EDL933 # 1 64 1 64 64 114 100.0 4e-26 MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIRAAREVMQDELMQMPEF KEIA >gi|299857057|gb|ADWS01000007.1| GENE 47 26019 - 26165 61 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLTDCLANFFVTYTITQTNVHDCSRSNSAQSVNENGYDYNSTVLFAP >gi|299857057|gb|ADWS01000007.1| GENE 48 26267 - 27451 1634 394 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 406 407 634 76 1e-180 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARG ITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHI LLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALE GDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVG EEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIK PHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMV VTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLG >gi|299857057|gb|ADWS01000007.1| GENE 49 27522 - 29636 2210 704 aa, chain - ## HITS:1 COG:ECs4191 KEGG:ns NR:ns ## COG: ECs4191 COG0480 # Protein_GI_number: 15833445 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Escherichia coli O157:H7 # 1 704 1 704 704 1402 100.0 0 MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG ITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFT GVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGG EELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILD DGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERF GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAV EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE ANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI KGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIA FKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPL SEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK >gi|299857057|gb|ADWS01000007.1| GENE 50 29733 - 30203 777 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803854|ref|NP_289888.1| 30S ribosomal protein S7 [Escherichia coli O157:H7 EDL933] # 1 156 1 156 156 303 100 3e-81 MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELE AFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRL ANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW >gi|299857057|gb|ADWS01000007.1| GENE 51 30300 - 30734 744 144 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226956878|ref|YP_002807671.1| 30S ribosomal subunit protein S12 [Escherichia sp. 1_1_43] # 1 144 1 144 144 291 99 2e-77 MCEDVLLRVYEAKAKTRSYLMATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTT TPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRG ALDCSGVKDRKQARSKYGVKRPKA >gi|299857057|gb|ADWS01000007.1| GENE 52 30800 - 31087 293 95 aa, chain - ## HITS:1 COG:ECs4194 KEGG:ns NR:ns ## COG: ECs4194 COG2168 # Protein_GI_number: 15833448 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in oxidation of intracellular sulfur # Organism: Escherichia coli O157:H7 # 1 95 1 95 95 182 98.0 2e-46 MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYLESLRNAPIKVYALNED LIARGLTGQISNDIIPIDYTDFVRLTVKHSSQMAW >gi|299857057|gb|ADWS01000007.1| GENE 53 31095 - 31454 234 119 aa, chain - ## HITS:1 COG:yheM KEGG:ns NR:ns ## COG: yheM COG2923 # Protein_GI_number: 16131223 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in the oxidation of intracellular sulfur # Organism: Escherichia coli K12 # 1 119 1 119 119 223 99.0 5e-59 MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLLSGQKPDAVLARD YIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLEADALRRELANYDVILRF >gi|299857057|gb|ADWS01000007.1| GENE 54 31454 - 31840 390 128 aa, chain - ## HITS:1 COG:ECs4196 KEGG:ns NR:ns ## COG: ECs4196 COG1553 # Protein_GI_number: 15833450 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Escherichia coli O157:H7 # 1 128 1 128 128 225 96.0 1e-59 MRFAIVVTGPAYGTQQASSAFQFAQALIAEGHELSSVFFYREGVYNANQLTSPASDEFDL VRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSNLQPGFTLSGLGALAEASL TCDRVVQF >gi|299857057|gb|ADWS01000007.1| GENE 55 31840 - 32562 633 240 aa, chain - ## HITS:1 COG:yheO KEGG:ns NR:ns ## COG: yheO COG2964 # Protein_GI_number: 16131225 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 240 5 244 244 463 98.0 1e-130 MSRSLLTNETSELDLLDQRPFDQSDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCS AIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNR EQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSNVNFASSVEDLVTQTLEFTIEEVNA DRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFLGQDK >gi|299857057|gb|ADWS01000007.1| GENE 56 32729 - 33541 1005 270 aa, chain - ## HITS:1 COG:ECs4198 KEGG:ns NR:ns ## COG: ECs4198 COG0545 # Protein_GI_number: 15833452 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli O157:H7 # 1 259 1 259 270 418 100.0 1e-117 MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKNDDQKSAYALGASLGRYM ENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKSSAQAKMEKD AADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKE FDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTLV FDVELLDVKPAPKADAKPEADAKAADSAKK >gi|299857057|gb|ADWS01000007.1| GENE 57 33762 - 33980 328 72 aa, chain + ## HITS:1 COG:ECs4199 KEGG:ns NR:ns ## COG: ECs4199 COG2900 # Protein_GI_number: 15833453 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 72 1 72 72 99 98.0 1e-21 MQDLSLETRLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDHLRLLTEKLKASQPSNI ASQAEETPPPHY >gi|299857057|gb|ADWS01000007.1| GENE 58 34029 - 34619 771 196 aa, chain - ## HITS:1 COG:ECs4200 KEGG:ns NR:ns ## COG: ECs4200 COG1047 # Protein_GI_number: 15833454 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Escherichia coli O157:H7 # 1 148 1 148 196 271 100.0 7e-73 MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDV AVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVD GNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHHDHDHDGCCGGHGHDHGHEHG GEGCCGGKGNGGCGCH >gi|299857057|gb|ADWS01000007.1| GENE 59 34714 - 34914 207 66 aa, chain - ## HITS:1 COG:Z4708 KEGG:ns NR:ns ## COG: Z4708 COG3529 # Protein_GI_number: 15803863 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Escherichia coli O157:H7 EDL933 # 1 66 1 66 66 120 100.0 6e-28 MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVI GIFHPD >gi|299857057|gb|ADWS01000007.1| GENE 60 34924 - 36729 1053 601 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 7 590 9 612 618 410 36 1e-113 MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGPWGLGFISDVDEILHFS ELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALLAGLLMLTDFAWQAAVVGG IGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAVIPALALVPLLAGSADEHFDW MKIGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFTAATLLLVLGSALFMDALGLSMA LGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFISVGMSLNLGVLYTHLLWVVISVVV LVAVKILVLYLLARLYGVRSSERMQFAGVLSQGGEFAFVLFSTASSQRLFQDDQMALLLV TVTLSMMTTPLLMKLVDKWLSRQFNGPEEEDEKPWVNDDKPQVIVVGFGRFGQVIGRLLM ANKMRITVLERDISAVNLMRKYGYKVYYGDATQVDLLRSAGAEAAESIVITCNEPEDTMK LVEICQQHFPHLHILARARGRVEAHELLQAGVTQFSRETFSRALELGRKTLVTLGMHPHQ AQRAQLHFRRLDMRMLRELIPMHADTVQISRAREARRELEEIFQREMQQERRQLDGWDEF E >gi|299857057|gb|ADWS01000007.1| GENE 61 36729 - 37280 449 183 aa, chain - ## HITS:1 COG:ECs4202 KEGG:ns NR:ns ## COG: ECs4202 COG2249 # Protein_GI_number: 15833456 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 183 2 184 184 365 100.0 1e-101 MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPREQALLRE HEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRY DALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARAYGDWLANPLSP GGR >gi|299857057|gb|ADWS01000007.1| GENE 62 37411 - 39324 2425 637 aa, chain + ## HITS:1 COG:ECs4203 KEGG:ns NR:ns ## COG: ECs4203 COG0488 # Protein_GI_number: 15833457 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 637 1 637 637 1209 99.0 0 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTF PGSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAI DAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHL DLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRAT RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRF SFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG ELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQ GDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGAL VVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDDAPKENANSA QARKDQKRREAELRAQTQPLRKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELT ACLQQQASAKSGLEECEMAWLEAQEQLEQMLLEGQSN >gi|299857057|gb|ADWS01000007.1| GENE 63 39417 - 40346 792 309 aa, chain + ## HITS:1 COG:yheT KEGG:ns NR:ns ## COG: yheT COG0429 # Protein_GI_number: 16131232 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Escherichia coli K12 # 1 309 32 340 340 647 99.0 0 MLPRLFRRQVKFTPYWQRLELPDGDFVDLAWSEDPAQAKHKPRLVVFHGLEGSLNSPYAH GLVEAAQKRGWLSVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVG YSLGGNMLACLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANA ARKLAAYPGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKP TLIIHAKDDPFMDHQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWL TTYLEAKSC >gi|299857057|gb|ADWS01000007.1| GENE 64 40340 - 40558 344 72 aa, chain + ## HITS:1 COG:ECs4205 KEGG:ns NR:ns ## COG: ECs4205 COG3089 # Protein_GI_number: 15833459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 72 1 72 72 130 100.0 4e-31 MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKRQLQCGEAVLVWSELHE TVNIMPRSQFRE >gi|299857057|gb|ADWS01000007.1| GENE 65 40612 - 41481 928 289 aa, chain + ## HITS:1 COG:prkB KEGG:ns NR:ns ## COG: prkB COG3954 # Protein_GI_number: 16131234 # Func_class: C Energy production and conversion # Function: Phosphoribulokinase # Organism: Escherichia coli K12 # 1 289 1 289 289 593 99.0 1e-169 MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKAR DAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPL PEPTDVLFYEGLHGGVVTPQHNVAQYVDLLVGVVPIVNLEWIQKLIRDTSERGHSREAVM DSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFAAKGIPSLDESFVVIHFRNLEGI DFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQRLMEGKKIE >gi|299857057|gb|ADWS01000007.1| GENE 66 41536 - 41940 421 134 aa, chain - ## HITS:1 COG:ECs4207 KEGG:ns NR:ns ## COG: ECs4207 COG1765 # Protein_GI_number: 15833461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 257 100.0 3e-69 MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGR QDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLE KAVNITHSYEVVAA >gi|299857057|gb|ADWS01000007.1| GENE 67 42242 - 42874 871 210 aa, chain + ## HITS:1 COG:ECs4208 KEGG:ns NR:ns ## COG: ECs4208 COG0664 # Protein_GI_number: 15833462 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 1 210 1 210 210 418 100.0 1e-117 MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQ MARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS RETVGRILKMLEDQNLISAHGKTIVVYGTR >gi|299857057|gb|ADWS01000007.1| GENE 68 42925 - 45015 1757 696 aa, chain + ## HITS:1 COG:ECs4209 KEGG:ns NR:ns ## COG: ECs4209 COG1289 # Protein_GI_number: 15833463 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 696 1 696 696 1331 99.0 0 MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVPACCNIAGLDTPHKRFF KRLIIGASLFATCSLLTQLLLVKDVPLPFLLTGLTLVLGVTAELGPLHAKLLPASLLAAI FTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQPLRESLSLLYRELADYCEAKY SLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLSAQNNTDYKRMLRIFQEALDLQE HISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARLRVLADDILYHRLPTRFTMEKQIGA LEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPLYARDLLADKQRRMPLLPALKSYLSLK SPALRNAGRLSVMLSVASLMGTALHLPKSYWILMTVLLVTQNGYGATRLRIVNRSVGTVV GLIIAGVALHFKIPEGYTLTLMLITTLASYLILRKNYGWATVGFTITAVYTLQLLWLNGE QYILPRLIDTIIGCLIAFGGTVWLWPQWQSGLLRKNAHDALEAYQEAIRLILSEDPQPTP LAWQRMRVNQAHNTLYNSLNQAMQEPAFNSHYLADMKLWVTHSQFIVEHINAMTTLAREH RALPPELAQEYLQSCEIAIQRCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQ RVIGHLNTMHTISSMAWRQRPHHGIWLSRKLRDSKA >gi|299857057|gb|ADWS01000007.1| GENE 69 45082 - 46302 1282 406 aa, chain - ## HITS:1 COG:argD KEGG:ns NR:ns ## COG: argD COG4992 # Protein_GI_number: 16131238 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli K12 # 1 406 1 406 406 816 99.0 0 MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEYVDFAGGIAVTALGHCH PALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERVVFMNSGTEANETAFKLAR HYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVK AVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRTGDLFA YMHYGVTPDILTSAKALGGGFPISAMLTTAEIASAFHPGSHGSTYGGNPLSCAVAGAAFD IINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGAELKPQFKGRARDFLYA GAGAGVMVLNAGPDVMRFAPSLVVEDADIDEGMQRFAHAVAKVVGA >gi|299857057|gb|ADWS01000007.1| GENE 70 46388 - 46951 484 187 aa, chain - ## HITS:1 COG:pabA KEGG:ns NR:ns ## COG: pabA COG0512 # Protein_GI_number: 16131239 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Escherichia coli K12 # 1 187 1 187 187 400 100.0 1e-112 MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAG ISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHNGEGVFRGLAN PLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQL LANFLHR >gi|299857057|gb|ADWS01000007.1| GENE 71 46983 - 47585 726 200 aa, chain - ## HITS:1 COG:fic KEGG:ns NR:ns ## COG: fic COG2184 # Protein_GI_number: 16131240 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Escherichia coli K12 # 1 200 1 200 200 396 99.0 1e-110 MSDKFGEGRDPYLYPGLDIMRNRLNIHQQQRLEQAAYEMTALRAATIELGPLVRGLPHLR TIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNALMQDLEEEGYLVGLEKAKF VERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQLSWQGIEKEAWNQANQSGAMG DLTALQMIFSKVVSEAGESE >gi|299857057|gb|ADWS01000007.1| GENE 72 47575 - 47742 134 55 aa, chain - ## HITS:1 COG:no KEGG:Z4723 NR:ns ## KEGG: Z4723 # Name: yhfG # Def: hypothetical protein # Organism: E.coli_O157 # Pathway: not_defined # 1 55 1 55 55 69 98.0 3e-11 MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALARLEELRRHYER >gi|299857057|gb|ADWS01000007.1| GENE 73 47847 - 48419 502 190 aa, chain - ## HITS:1 COG:ECs4214 KEGG:ns NR:ns ## COG: ECs4214 COG0652 # Protein_GI_number: 15833468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 359 100.0 2e-99 MFKSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYV NSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADK DSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKP VVILSAKVLP >gi|299857057|gb|ADWS01000007.1| GENE 74 48690 - 49871 1206 393 aa, chain + ## HITS:1 COG:yhfC KEGG:ns NR:ns ## COG: yhfC COG0477 # Protein_GI_number: 16131243 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 393 1 393 393 684 100.0 0 MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSSMSNTFTFLNAGILISI FLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAAMFILGVVSGITMSIGTFL VTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSIEWYWVYACIGLVYVAIFILT FGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCYILGQLGFISWVPEYAKGLGMSL NDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSI LALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVLTCGTIGTMLTFVVTGPIVEHSGPQAA LLTANGLYAVVFVMCFLLGFVSRHRQHNTLTSH >gi|299857057|gb|ADWS01000007.1| GENE 75 50133 - 52676 2967 847 aa, chain + ## HITS:1 COG:nirB KEGG:ns NR:ns ## COG: nirB COG1251 # Protein_GI_number: 16131244 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Escherichia coli K12 # 1 847 1 847 847 1739 99.0 0 MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEE LSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKG SDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPML MAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELEVDFIVFS TGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRVFGLVAPGYKMA QVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEIYKRLI VSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHSGSGKPSIGVDKLPD SAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIE VNNNLCEHFAYSRQELFHLIRVEGIKTFEELLAKHGKGYGCEVCKPTVGSLLASCWNEYI LKPEHTPLQDSNDNFLANIQKDGTYSVIPRSPGGEITPEGLMAVGRIAREFNLYTKITGS QRLAMFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVE LENRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLL AADIDRETLIKYLDRFMMFYIRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLE EEMARLREAVVCEWTETVNTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPV TLVEDNA >gi|299857057|gb|ADWS01000007.1| GENE 76 52673 - 52999 470 108 aa, chain + ## HITS:1 COG:ECs4217 KEGG:ns NR:ns ## COG: ECs4217 COG2146 # Protein_GI_number: 15833471 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 223 100.0 8e-59 MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIA EHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG >gi|299857057|gb|ADWS01000007.1| GENE 77 53126 - 53932 1022 268 aa, chain + ## HITS:1 COG:nirCm KEGG:ns NR:ns ## COG: nirCm COG2116 # Protein_GI_number: 16132233 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli K12 # 1 268 1 268 268 468 100.0 1e-132 MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLV MGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVA MLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKF IAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVF MGLGYWYATPKANRPVADKFNQTETAAG >gi|299857057|gb|ADWS01000007.1| GENE 78 53951 - 55324 1350 457 aa, chain + ## HITS:1 COG:cysG_2 KEGG:ns NR:ns ## COG: cysG_2 COG0007 # Protein_GI_number: 16131246 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Escherichia coli K12 # 211 457 1 247 247 503 100.0 1e-142 MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTL VEGPFDESLLDTCWLAIAATDDDALNQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRS PLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQLRGRVKQQFATMGERRRFWE KLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEVVLVGAGPGDAGLLTLKGLQQIQ QADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLK GGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLITGHL KTGGELDWENLAAEKQTLVFYMGLNQAATIQQKLIEHGMPGEMPVAIVENGTAVTQRVID GTLTQLGELAQQMNSPSLIIIGRVVGLRDKLNWFSNH >gi|299857057|gb|ADWS01000007.1| GENE 79 55571 - 55738 262 55 aa, chain + ## HITS:1 COG:no KEGG:LF82_3285 NR:ns ## KEGG: LF82_3285 # Name: yhfL # Def: uncharacterized protein YhfL # Organism: E.coli_LF82 # Pathway: not_defined # 1 55 1 55 55 107 100.0 1e-22 MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTAQ >gi|299857057|gb|ADWS01000007.1| GENE 80 56033 - 57370 1348 445 aa, chain + ## HITS:1 COG:yhfM KEGG:ns NR:ns ## COG: yhfM COG0531 # Protein_GI_number: 16131248 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 445 18 462 462 782 100.0 0 MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQM CVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLT PIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENF AAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVL VLYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCV MYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLV MCFKNTLTFGSIIWCRKRDDYKPLWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICA VIVIATGLPAYAFWAKRSRQLNALS >gi|299857057|gb|ADWS01000007.1| GENE 81 57391 - 58413 1234 340 aa, chain + ## HITS:1 COG:yhfN KEGG:ns NR:ns ## COG: yhfN COG2222 # Protein_GI_number: 16131249 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Escherichia coli K12 # 1 340 8 347 347 725 100.0 0 MLDIDKSTVDFLVTENMVQEVEKVLSHDVPLVHAIVEEMVKRDIDRIYFVACGSPLNAAQ TAKHLADRFSDLQVYAISGWEFCDNTPYRLDDRCAVIGVSDYGKTEEVIKALELGRACGA LTAAFTKRADSPITSAAEFSIDYQADCIWEIHLLLCYSVVLEMITRLAPNAEIGKIKNDL KQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGPLRPLGYKEGIVTLMEFTWTHGC VIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTERAINFVKQRTDNVIVIDYAEISQGL HPWLAPFLMFVPMEWLCYYLSIYKDHNPDERRYYGGLVEY >gi|299857057|gb|ADWS01000007.1| GENE 82 58463 - 59293 903 276 aa, chain + ## HITS:1 COG:ECs4223 KEGG:ns NR:ns ## COG: ECs4223 COG1082 # Protein_GI_number: 15833477 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Escherichia coli O157:H7 # 1 275 1 275 275 564 99.0 1e-161 MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQ MPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPP NVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCNANDVLHALALVPSPRLFSMV DICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTHYIPGEGKMPLRELMRDIIDRGY DGYCTVELVTMYMNEPRLYARQALERFRALLPEDER >gi|299857057|gb|ADWS01000007.1| GENE 83 59290 - 60075 845 261 aa, chain + ## HITS:1 COG:yhfQ KEGG:ns NR:ns ## COG: yhfQ COG0524 # Protein_GI_number: 16131252 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 1 261 1 261 261 517 99.0 1e-146 MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDL ARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADFALSEEDYAWLAQYDIVHA AIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHLDFAFASAPQEDEALRLKMKA IVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVIDTMGAGDSFIAGFLCGWSAGMTL PQAMAQGTACAAKTIQYHGAW >gi|299857057|gb|ADWS01000007.1| GENE 84 60175 - 60906 625 243 aa, chain + ## HITS:1 COG:ECs4225 KEGG:ns NR:ns ## COG: ECs4225 COG2188 # Protein_GI_number: 15833479 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 243 23 265 265 501 99.0 1e-142 MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLV ADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATKEKVIEQERVSAAPFCEKL NIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEIYVEGSSTYQLFQERFDTRVV SDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQNDKPVHVSELFCRANRITLTIDN KRH >gi|299857057|gb|ADWS01000007.1| GENE 85 61058 - 62143 924 361 aa, chain - ## HITS:1 COG:no KEGG:ECO111_4185 NR:ns ## KEGG: ECO111_4185 # Name: yhfS # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 361 1 361 361 661 99.0 0 MKTFPLQSLTIIEAQQKQFALVDSICRHFPGSEFLTGGDLGLTPGLNQPRITQRVEQVLA DAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYPTTRVIIEQMGLTLITVDF NDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATLRAAGVPALTDDNYAVMKVAR IGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV FAPVMHAVQAGVSERLLALLNGGAVPEVKSAMIANAQSKVLIVEFHQPIAARVLEEAQKR GALPYPVGAESKYEIPPLFYRLSGTFRQANPQSEHCAIRINPNRSGEETVLRILRESIAS I >gi|299857057|gb|ADWS01000007.1| GENE 86 62155 - 63459 1401 434 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4095 NR:ns ## KEGG: ECO103_4095 # Name: yhfT # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 434 1 434 434 729 100.0 0 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF VASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLT ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLVAAVVVLMTRVVVVRYFPHLN PESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIA AVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALAT GVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIR NAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGI LLNVLYWLGLFVPA >gi|299857057|gb|ADWS01000007.1| GENE 87 63471 - 63824 525 117 aa, chain - ## HITS:1 COG:no KEGG:SBO_3365 NR:ns ## KEGG: SBO_3365 # Name: yhfU # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 117 14 130 130 213 100.0 2e-54 MKKIGVAGLQREQIKKTIEATAPGSFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK >gi|299857057|gb|ADWS01000007.1| GENE 88 63835 - 64713 1088 292 aa, chain - ## HITS:1 COG:php KEGG:ns NR:ns ## COG: php COG1735 # Protein_GI_number: 16131257 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Escherichia coli K12 # 1 292 1 292 292 590 99.0 1e-169 MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMG RNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKA GIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLS RVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVML SMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQADVDVMLRETPSQFFQ >gi|299857057|gb|ADWS01000007.1| GENE 89 64710 - 65936 1218 408 aa, chain - ## HITS:1 COG:yhfW KEGG:ns NR:ns ## COG: yhfW COG1015 # Protein_GI_number: 16131258 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Escherichia coli K12 # 1 408 1 408 408 820 99.0 0 MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLEKLGLINALGYA PGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFCDVIDRVEQALVSAGW QVERRGDELQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVREQVQVG RVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDKKVQVPQKL YEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLNEFNTHPTAFICTNIQETDLA GHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVY QQGMIATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL >gi|299857057|gb|ADWS01000007.1| GENE 90 65936 - 67099 1241 387 aa, chain - ## HITS:1 COG:yhfX KEGG:ns NR:ns ## COG: yhfX COG3457 # Protein_GI_number: 16131259 # Func_class: E Amino acid transport and metabolism # Function: Predicted amino acid racemase # Organism: Escherichia coli K12 # 1 387 1 387 387 761 95.0 0 MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQVLENGKRLIETARLYGIELYLMT KQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLSVAHQGHLVQIPCHQVADAVEQG TDVITVFTLDKAREVSAAAVKAGRVQFVLLKVYSDDDFLYPGQESGFVQHSLHEVVAEIK KLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSATSCT SLPLLAEYGVTHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYR RGHAQHALVFTPENQKITETNLKTVDDSSIDYTLPLAGEYPVSSAVVLCFRTQIFVTRSD VVLVSGIHRGEPKIVGRYDSLGDSLGA >gi|299857057|gb|ADWS01000007.1| GENE 91 67183 - 67545 371 120 aa, chain - ## HITS:1 COG:no KEGG:SSON_3513 NR:ns ## KEGG: SSON_3513 # Name: yhfY # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 120 15 134 134 220 100.0 1e-56 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV >gi|299857057|gb|ADWS01000007.1| GENE 92 67562 - 68467 807 301 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4101 NR:ns ## KEGG: ECO103_4101 # Name: yhfZ # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 301 1 301 301 606 100.0 1e-172 MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVGLTQAALKTLESSGAIR IERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEGLASGLKAQFDGIPFYYAH MRGADIRVECLLNGVYDMAVVSRLAAESYLTQKGFCLALELGPHTYVGEHQLICRKGESA NVKRVGLDNRSADQKIMTDVFFGDSDVERVDLSYHESLQRIVKGDVDAVIWNVVAENELT MLGLEATPLTDDPRFLQATEAVVLTRADDYPMQQLLRAVVDKHALLAHQQRVVSGEQEPS Y >gi|299857057|gb|ADWS01000007.1| GENE 93 68736 - 69740 1278 334 aa, chain - ## HITS:1 COG:trpS KEGG:ns NR:ns ## COG: trpS COG0180 # Protein_GI_number: 16131262 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 334 1 334 334 683 99.0 0 MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQHAITVRQDAQKLRKAT LDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYAEN INAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDIAQRFNALYGEIFKVPEPFIP KSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVKKIKRAVTDSDEPPVVRYDVQNK AGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGEVADAVSGMLTELQERYHRFRNDEA FLQQVMKDGAEKASVHASRTLKAVYEAIGFVAKP >gi|299857057|gb|ADWS01000007.1| GENE 94 69856 - 70491 846 211 aa, chain - ## HITS:1 COG:gph KEGG:ns NR:ns ## COG: gph COG0546 # Protein_GI_number: 16131263 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Escherichia coli K12 # 1 211 1 211 252 411 100.0 1e-115 MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMER ALTWARQERATQRKTMGKPPVDDDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTL GALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERM GIAPQQMLFVGDSRNDIQAAKAAGCPSVGLT >gi|299857057|gb|ADWS01000007.1| GENE 95 70484 - 71161 785 225 aa, chain - ## HITS:1 COG:ECs4228 KEGG:ns NR:ns ## COG: ECs4228 COG0036 # Protein_GI_number: 15833482 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 441 100.0 1e-124 MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYG ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGV KVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSELAKVSHE >gi|299857057|gb|ADWS01000007.1| GENE 96 71179 - 72015 556 278 aa, chain - ## HITS:1 COG:ECs4229 KEGG:ns NR:ns ## COG: ECs4229 COG0338 # Protein_GI_number: 15833483 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Escherichia coli O157:H7 # 1 278 1 278 278 564 100.0 1e-161 MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRYILADINSDLI SLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQDPFRRAVLFLYLNRYGYN GLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFFYCESYADSMARADDASVVYC DPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVERHIPVLISNHDTMLTREWYQRA KLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPAKK >gi|299857057|gb|ADWS01000007.1| GENE 97 72122 - 73408 1086 428 aa, chain - ## HITS:1 COG:ECs4230 KEGG:ns NR:ns ## COG: ECs4230 COG3266 # Protein_GI_number: 15833484 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 481 99.0 1e-135 MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKE RNEEPEIEAEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGI GSALKAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAENTQQDVSLPPISSTP TQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASR ETAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAA TSTPATKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDN LNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPL RQVQADLK >gi|299857057|gb|ADWS01000007.1| GENE 98 73500 - 74588 922 362 aa, chain - ## HITS:1 COG:aroB KEGG:ns NR:ns ## COG: aroB COG0337 # Protein_GI_number: 16131267 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Escherichia coli K12 # 1 362 1 362 362 693 99.0 0 MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNETLAPLYLDKVRGVLEQA GVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQR GVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLDCLKTLPPRELAS GLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYCIRRCCELKAEVVAADERETGLR ALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAARTSERLGQFSSAETQRIITLLKRA GLPVNGPREMSAQAYLPHMLRDKKVLAGEIRLILPLAIGKSEVRSGVSHELVLNAIADCQ SA >gi|299857057|gb|ADWS01000007.1| GENE 99 74645 - 75166 572 173 aa, chain - ## HITS:1 COG:ECs4232 KEGG:ns NR:ns ## COG: ECs4232 COG0703 # Protein_GI_number: 15833486 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Escherichia coli O157:H7 # 1 173 68 240 240 321 100.0 4e-88 MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFR DREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKR PLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN >gi|299857057|gb|ADWS01000007.1| GENE 100 75567 - 76805 985 412 aa, chain - ## HITS:1 COG:hofQ KEGG:ns NR:ns ## COG: hofQ COG4796 # Protein_GI_number: 16131268 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Escherichia coli K12 # 1 412 1 412 412 738 100.0 0 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE >gi|299857057|gb|ADWS01000007.1| GENE 101 76717 - 77121 240 134 aa, chain - ## HITS:1 COG:no KEGG:SDY_3687 NR:ns ## KEGG: SDY_3687 # Name: yrfA # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 134 14 147 147 253 100.0 1e-66 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKK WRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR RTGGKAAKSDADGG >gi|299857057|gb|ADWS01000007.1| GENE 102 77111 - 77551 168 146 aa, chain - ## HITS:1 COG:no KEGG:B21_03197 NR:ns ## KEGG: B21_03197 # Name: yrfB # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 146 1 146 146 266 100.0 1e-70 MNMFFDWWFATSPRLRQLCWAVWLLMLVTLIFLSSTHHEERDALIRLRASHHQQWAALYR LVDTTPFSEEKTLPFSPLDFQLSGAQLVSWHPSAQGGELALKTLWEAVPSAFTRLAERNV SVSRFSLSVEGDDLLFTLQLETPHEG >gi|299857057|gb|ADWS01000007.1| GENE 103 77535 - 78074 257 179 aa, chain - ## HITS:1 COG:yrfC KEGG:ns NR:ns ## COG: yrfC COG3166 # Protein_GI_number: 16131271 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilN # Organism: Escherichia coli K12 # 1 179 1 179 179 253 100.0 1e-67 MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTGSAEARIDAVLLQAEQQ LARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEALAALLPEHAWLTTISWQQG TLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQGRWQFEYQLTRKVSDEHVL >gi|299857057|gb|ADWS01000007.1| GENE 104 78074 - 78853 675 259 aa, chain - ## HITS:1 COG:no KEGG:B21_03199 NR:ns ## KEGG: B21_03199 # Name: yrfD # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 259 1 259 259 493 100.0 1e-138 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW RDNEQWLWATRYRWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL PPSGGDFAIALGLALGKAY >gi|299857057|gb|ADWS01000007.1| GENE 105 78973 - 81525 2701 850 aa, chain + ## HITS:1 COG:ECs4238 KEGG:ns NR:ns ## COG: ECs4238 COG5009 # Protein_GI_number: 15833492 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Escherichia coli O157:H7 # 1 850 9 858 858 1710 99.0 0 MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRLQIPMQIYSADGELIAQ YGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRAASVALFSGHASQGAST ITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEILELYLNKIYLGYRAYGVGAAA QVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYITQQQF DQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRYGESAYEDGYRIYTTITRKVQQAAQ QAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNNKITDTLKALPTYGPLLPAAVTSANPQ QATAMLADGSTVALSMEGVRWARPYRSDTQQGPTPRKVTDVLQTGQQIWVRQVGDAWWLA QVPEVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGL TLASMLNDVPISRWDAGAGSDWQPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDY AAEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLVDPWFISKIENDQG GVIFEAKPKVACPECDIPVIYGDTQKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQA LVAKTGAQEYAPHVINTPLAFLIKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTT NSSKDAWFSGYGPGVVTSVWIGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAY MKAVLEGVPEQPLTPPPGIVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTI IDNGEAQELF >gi|299857057|gb|ADWS01000007.1| GENE 106 81690 - 82250 612 186 aa, chain - ## HITS:1 COG:yrfE KEGG:ns NR:ns ## COG: yrfE COG0494 # Protein_GI_number: 16131274 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli K12 # 1 186 1 186 186 360 100.0 1e-99 MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRPTNREAVMIVPIVDDHL ILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYF SSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDPDFNEARNVSALFLVREWL KGQGRV >gi|299857057|gb|ADWS01000007.1| GENE 107 82570 - 84705 1745 711 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3870 NR:ns ## KEGG: EcE24377A_3870 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 711 1 711 711 1384 99.0 0 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP PFWEQYINDENTVELIYTDSLPLVISLNGHTLQEYMQETRGYALQPVPSTQASIRGEESE QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ DLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPL DMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPF LPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLR PVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYD YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTL LLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE >gi|299857057|gb|ADWS01000007.1| GENE 108 84770 - 85438 843 222 aa, chain + ## HITS:1 COG:ECs4241 KEGG:ns NR:ns ## COG: ECs4241 COG1011 # Protein_GI_number: 15833495 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 222 16 237 237 458 99.0 1e-129 MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHD VQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHP HNLAVKLKHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILD AAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM >gi|299857057|gb|ADWS01000007.1| GENE 109 85449 - 85850 434 133 aa, chain + ## HITS:1 COG:ECs4242 KEGG:ns NR:ns ## COG: ECs4242 COG1188 # Protein_GI_number: 15833496 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 213 99.0 6e-56 MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQG NDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMAMARKLNALTMPHPDRRPDKKE RRDLLRFKHGDSE >gi|299857057|gb|ADWS01000007.1| GENE 110 85875 - 86753 1075 292 aa, chain + ## HITS:1 COG:ZyrfI KEGG:ns NR:ns ## COG: ZyrfI COG1281 # Protein_GI_number: 15803904 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Escherichia coli O157:H7 EDL933 # 1 292 3 294 294 585 100.0 1e-167 MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLK FDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITITPS EGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNA QQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCADA LKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPADPQVH >gi|299857057|gb|ADWS01000007.1| GENE 111 86888 - 88612 1449 574 aa, chain - ## HITS:1 COG:no KEGG:ECO111_4211 NR:ns ## KEGG: ECO111_4211 # Name: yhgE # Def: putative inner membrane protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 574 1 574 574 990 99.0 0 MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVIS FKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQ SLRIRNDSSRYSYFYKSVWHNVLILLVIFLANGLTWLVLLLWGELFKLVGIKFFNTLFFA TDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAELLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVA AWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGYFVSIVWRNGQNPLVLQGKVNLAVSLL VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIYMLEQSGRYGRAALESLKSDA GFMKDPKRARDLLMALDGEQHLQEQVSEKVLAENVLIAPGSVKPDATFWSALIQDRYNVM TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKE KLLTAAKDGKLGTRPKAWRDLTVDGETLEINLSK >gi|299857057|gb|ADWS01000007.1| GENE 112 88991 - 90613 1974 540 aa, chain + ## HITS:1 COG:pckA KEGG:ns NR:ns ## COG: pckA COG1866 # Protein_GI_number: 16131280 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Escherichia coli K12 # 1 540 1 540 540 1119 100.0 0 MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGYERGVLTNLGAVAVDTG IFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETWQHLKGLVTRQLSGKRLFV VDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGFKPDFIVMNGAKCTNPQW KEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEK GDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEI YNAIRRDALLENVTVREDGTIDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFL TADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQ YAEVLVKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNL AIPTELPGVDTKILDPRNTYASPEQWQEKAETLAKLFIDNFDKYTDTPAGAALVAAGPKL >gi|299857057|gb|ADWS01000007.1| GENE 113 90730 - 91047 145 105 aa, chain + ## HITS:1 COG:VCA0468 KEGG:ns NR:ns ## COG: VCA0468 COG2026 # Protein_GI_number: 15601229 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Vibrio cholerae # 4 102 5 103 110 84 49.0 5e-17 MFTFIELQGFSKRRQLLLPDDEFRAFQELLIQDPTAGDIIAGTGSFRKIRWNRSGMGKRG GIRIIYYNVTRNGRIYLALIYPKNEQDDLTEEQRKALKLLSEKLL >gi|299857057|gb|ADWS01000007.1| GENE 114 91106 - 91402 182 98 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_3684 NR:ns ## KEGG: EcSMS35_3684 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 98 1 98 98 181 100.0 7e-45 MKDELFADLLASAEEMVRIEKGEETPEPEHVHTFSEIDVKAIREATGLRQQDFAVAVGVS YDLVKSWETKRRQPTGAPRKLLLLLQANPFIINQLKTI >gi|299857057|gb|ADWS01000007.1| GENE 115 91434 - 92786 1287 450 aa, chain - ## HITS:1 COG:envZ KEGG:ns NR:ns ## COG: envZ COG0642 # Protein_GI_number: 16131281 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 450 1 450 450 899 100.0 0 MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTD KLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWAQHYEFLSHQMAQQLGGPT EVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPLFRYTLAIMLLAIGGAWLFIR IQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAG VSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMEMAD LNAVLGEVIAAESGYEREIETALYPGSIEVKMHPLSIKRAVANMVVNAARYGNGWIKVSS GTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTISGTGLGLAIVQRIVDNHNGML ELGTSERGGLSIRAWLPVPVTRAQGTTKEG >gi|299857057|gb|ADWS01000007.1| GENE 116 92783 - 93502 879 239 aa, chain - ## HITS:1 COG:ECs4247 KEGG:ns NR:ns ## COG: ECs4247 COG0745 # Protein_GI_number: 15833501 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 447 100.0 1e-126 MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPG EDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVL RRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPL SRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA >gi|299857057|gb|ADWS01000007.1| GENE 117 93730 - 94206 616 158 aa, chain + ## HITS:1 COG:ECs4248 KEGG:ns NR:ns ## COG: ECs4248 COG0782 # Protein_GI_number: 15833502 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Escherichia coli O157:H7 # 1 158 13 170 170 304 99.0 5e-83 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR RVRYLTKCMENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI DSPMARALLKKEVGDLAVVNTPAGETSWYVNAIEYVKP >gi|299857057|gb|ADWS01000007.1| GENE 118 94303 - 96624 1644 773 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein [Symbiobacterium thermophilum IAM 14863] # 1 743 1 743 764 637 48 0.0 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE AGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALDGARYILMERFAEDAALLAKV RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR >gi|299857057|gb|ADWS01000007.1| GENE 119 94303 - 96624 201 773 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241896285|ref|ZP_04783581.1| ribosomal protein S1 [Weissella paramesenteroides ATCC 33313] # 651 770 285 394 405 82 37 2e-14 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE AGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALDGARYILMERFAEDAALLAKV RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR >gi|299857057|gb|ADWS01000007.1| GENE 120 97062 - 97289 261 75 aa, chain + ## HITS:1 COG:ECs4250 KEGG:ns NR:ns ## COG: ECs4250 COG1918 # Protein_GI_number: 15833504 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 147 100.0 6e-36 MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAPLGDPIHIETRRVSLVL RKKDLALLEVEAVSC >gi|299857057|gb|ADWS01000007.1| GENE 121 97306 - 99627 2666 773 aa, chain + ## HITS:1 COG:ZfeoB KEGG:ns NR:ns ## COG: ZfeoB COG0370 # Protein_GI_number: 15803913 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Escherichia coli O157:H7 EDL933 # 1 773 1 773 773 1502 99.0 0 MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGT YSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALN MLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYAQP LLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDAALARLRNEMDDP ALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDKIVLNRFLGLPIFLFVMYLMFLLAI NIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDWLTIFLAQGLGGGINTVLPLVPQIGMM YLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSVMGARTLDAPRER LMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYMLGIVMAVLTGLMLKYTIMRG EATPFVMELPVYHVPHVKSLIIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVD NINDSALASVSRVITPVFKPIGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDE EFNPAEFNLGEELFSAIDETWQSLKDTFSLSVLMNPIEASKGDGEMGTGAMGVMDQKFGS AAAAYSYLIFVLLYVPCISVMGAIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQH PTYSLVCILAVILFNIVVIGLLRRARSRVDIELLATRKSVSSCCAASTTGDCH >gi|299857057|gb|ADWS01000007.1| GENE 122 99627 - 99863 180 78 aa, chain + ## HITS:1 COG:no KEGG:SDY_3666 NR:ns ## KEGG: SDY_3666 # Name: yhgG # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 78 1 78 78 135 98.0 5e-31 MASLIQVRDLLALRGRMESAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGS CKSCPEGKACLREWWALR >gi|299857057|gb|ADWS01000007.1| GENE 123 100066 - 100944 723 292 aa, chain + ## HITS:1 COG:yhgA KEGG:ns NR:ns ## COG: yhgA COG5464 # Protein_GI_number: 16131287 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 292 1 292 292 575 98.0 1e-164 MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKTLKLESSSFIDDDLRES YSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAAMQNHLDAGYKTLPMVVLL LFYHGIESPYPYSLSWLDCFADPKLARQLYASAFPLIDVTVMPDDEIMQHRRMALLELIQ KHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQTGDAVRFNDFIDGVAERSPKHK ESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDIMRFTGVSEEELAAASQ >gi|299857057|gb|ADWS01000007.1| GENE 124 100973 - 101743 591 256 aa, chain - ## HITS:1 COG:bioH KEGG:ns NR:ns ## COG: bioH COG0596 # Protein_GI_number: 16131288 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 256 1 256 256 514 99.0 1e-146 MNNIWWQTKGQGNVHLVLLHGWGLNAEVWHCIDEELSSHFTLHLVDLPGFGRSRGFGALS LADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGI KPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGL EILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFIS HPVEFCHLLVALKQRV >gi|299857057|gb|ADWS01000007.1| GENE 125 101781 - 102464 239 227 aa, chain + ## HITS:1 COG:ECs4254 KEGG:ns NR:ns ## COG: ECs4254 COG1040 # Protein_GI_number: 15833509 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Escherichia coli O157:H7 # 1 227 17 243 243 400 98.0 1e-111 MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPATHSHLPCGRCLQKPPP WQRLVTVADYAPPLSLLIHQLKFSRRSEIASALSRLLLLEVLHARRTTGLQLPDRIISVP LWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRATATQHFLSARLRKRNLKNAFR LELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWCLCRTL >gi|299857057|gb|ADWS01000007.1| GENE 126 102523 - 103098 749 191 aa, chain + ## HITS:1 COG:yhgI_2 KEGG:ns NR:ns ## COG: yhgI_2 COG0694 # Protein_GI_number: 16131290 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin-like proteins and domains # Organism: Escherichia coli K12 # 97 191 1 95 95 197 100.0 8e-51 MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDL LTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQIN PQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRDL TEHQRGEHSYY >gi|299857057|gb|ADWS01000007.1| GENE 127 103459 - 104775 1672 438 aa, chain + ## HITS:1 COG:ECs4257 KEGG:ns NR:ns ## COG: ECs4257 COG2610 # Protein_GI_number: 15833511 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli O157:H7 # 1 438 1 438 438 700 100.0 0 MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLDKVIGSIKAGVGGTLGS LALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVVLTGFTVGFALFYEVGFVL MLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGPTAIATIFNADMGKTLLYGTI LAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEEMPSFGVSVWTSLVPVVLMAMRA IAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFTFGLNRGRSMDQINDTLVSSIKIIA MMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNISPLLMAWSIAAVLRIALGSATVAAIT AGGIAAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIKSWSMLE TIISVCGLVGCLLLNMVI >gi|299857057|gb|ADWS01000007.1| GENE 128 104820 - 106904 1965 694 aa, chain - ## HITS:1 COG:malQ KEGG:ns NR:ns ## COG: malQ COG1640 # Protein_GI_number: 16131292 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Escherichia coli K12 # 1 684 1 684 694 1410 99.0 0 MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVY TSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRA HCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWGIGDFGDLKAMLVDVAKRGGS FIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQT LQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMTAFRQFVAEQGDSLFWQAAFDA LHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFCEEHRNDVDFYLWLQWLAYSQFAACWE ISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDP HIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLS ILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQS MAVAATHDLPTLRGYWESGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCL PKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWR RKLSATLESMFADDGVNKLLKDLDRRRRAAAKKK >gi|299857057|gb|ADWS01000007.1| GENE 129 106914 - 109307 2739 797 aa, chain - ## HITS:1 COG:ECs4259 KEGG:ns NR:ns ## COG: ECs4259 COG0058 # Protein_GI_number: 15833513 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Escherichia coli O157:H7 # 1 797 1 797 797 1644 99.0 0 MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPVANQR HVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLA ACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQV GIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFL RAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAGRKLHELAD YEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKL VKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNG VAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWAND LDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYK RQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDP LVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG ANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGD KHAFDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFS SDRSIRDYQARIWQAKR >gi|299857057|gb|ADWS01000007.1| GENE 130 109919 - 112624 2339 901 aa, chain + ## HITS:1 COG:ECs4260 KEGG:ns NR:ns ## COG: ECs4260 COG2909 # Protein_GI_number: 15833514 # Func_class: K Transcription # Function: ATP-dependent transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 901 1 901 901 1679 100.0 0 MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLISQWAAGKNDIG WYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWH SPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSRNLPQLGIANLRVRDQLLEIG SQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGWATALQLIALSARQNTHSAHKSA RRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEE IERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQWELAAELPEIHRAAAESWMAQGFPSEA IHHALAAGDALMLRDILLNHAWSLFNHSELSLLEESLKALPWDSLLENPQLVLLQAWLMQ SQHRYGEVNTLLARAEHEIKDIREGTMHAEFNALRAQVAINDGNPDEAERLAKLALEELP PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL SSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYW QMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARS LRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQ LIQLNTLPELEQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQRE WQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQAAVQHAQKLLKMMGYG V >gi|299857057|gb|ADWS01000007.1| GENE 131 112667 - 113674 851 335 aa, chain - ## HITS:1 COG:yhgK+J KEGG:ns NR:ns ## COG: yhgK+J COG0430 # Protein_GI_number: 16132255 # Func_class: A RNA processing and modification # Function: RNA 3'-terminal phosphate cyclase # Organism: Escherichia coli K12 # 1 335 5 339 339 614 98.0 1e-176 MIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICG ATVEGAELGSQRLLFRPGTVRGGEYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGG TDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLG ERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESE NITERFFVVGEKRVSAEVVAAQLVKEVKRYLASPAAVGEYLADQLVLPMALAGAGEFTVA HPSCHLLTNIAVVERFLPVRFGLIETDGVTRVSIE >gi|299857057|gb|ADWS01000007.1| GENE 132 113687 - 114913 1292 408 aa, chain - ## HITS:1 COG:rtcB KEGG:ns NR:ns ## COG: rtcB COG1690 # Protein_GI_number: 16131295 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 408 1 408 408 852 100.0 0 MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSV IPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQAIETAVPHGRTTGRCKRDK GAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQV WIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQ LFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKG AVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRA TAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG >gi|299857057|gb|ADWS01000007.1| GENE 133 115102 - 116700 1292 532 aa, chain + ## HITS:1 COG:rtcR KEGG:ns NR:ns ## COG: rtcR COG4650 # Protein_GI_number: 16131296 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli K12 # 1 532 1 532 532 1040 98.0 0 MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRLELLHDTRSRSLFETLK RDIASVSPETEVVGVEIELHNPWDFEEVYACLHDFARGYEFQPEKEDYLIHITTGTHVAQ ICWFLLAEARYLPARLIQSSPPRKKEQPRGAGEVTIIDLDLSRYNAIASRFAEERQQTLD FLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSG AFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQA MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPG LRQRQEDIEPNLDYEVERHATLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVT RMATFATSGRITLDVVEDEINRLRYNWQESRPSALTALLGAEAENIDLFDRLQLEHVIAL CRQAKSLSAAGRLLFDVSRQGKASVNDADRLRKYLARFGLTWEAVQDQHSSS >gi|299857057|gb|ADWS01000007.1| GENE 134 116682 - 117440 812 252 aa, chain - ## HITS:1 COG:glpR KEGG:ns NR:ns ## COG: glpR COG1349 # Protein_GI_number: 16131297 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 252 1 252 252 491 100.0 1e-139 MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLILRHHGGAALPS SSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTTPEAVAHALLNHSNLRIVT NNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSDGS LLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDAPPPVSVMQ VLTDHHIQLELC >gi|299857057|gb|ADWS01000007.1| GENE 135 117457 - 118281 842 274 aa, chain - ## HITS:1 COG:glpG KEGG:ns NR:ns ## COG: glpG COG0705 # Protein_GI_number: 16131298 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Escherichia coli K12 # 1 274 3 276 276 514 98.0 1e-146 MITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQAERVRAELARFLENPADP RYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVVMIACVVVFIAMQILGDQEVMLW LAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISA LLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWF DLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK >gi|299857057|gb|ADWS01000007.1| GENE 136 118332 - 118658 493 108 aa, chain - ## HITS:1 COG:glpE KEGG:ns NR:ns ## COG: glpE COG0607 # Protein_GI_number: 16131299 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 108 1 108 108 212 100.0 2e-55 MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTP VMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEVAYGA >gi|299857057|gb|ADWS01000007.1| GENE 137 118848 - 120353 1665 501 aa, chain + ## HITS:1 COG:ECs4269 KEGG:ns NR:ns ## COG: ECs4269 COG0578 # Protein_GI_number: 15833523 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 501 1 501 501 984 99.0 0 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYE FRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGS TGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGMHLPSPYGIRLIKGSHIVVPRVH TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLKVYNAHF KKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRK LAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPFLTESLARHYART YGSNSELLLGNAGAISDLGEDFGHEFYEAELKYLVDHEWVRRTDDALWRRTKQGMWLNAD QQSRVSQWLVEYTQQKLSLAS >gi|299857057|gb|ADWS01000007.1| GENE 138 120405 - 121010 49 201 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4145 NR:ns ## KEGG: ECO103_4145 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 201 1 201 201 351 100.0 8e-96 MIKFRLYIPPVILGFVIVPLLVWPTVIVLAVLIFTLTFLAEIIFSFPLLVVRISLQELQL ELMVEYALFFSVMAGIGWQFSRRTPPELKNRLHCWLVFSPVYFWLILSNFILYISPEKSA LLENIRNFFLTFVWPPLNFSPFWPQPWTDFVGPISAQLGFALGYYCHWCRKNRNQRKKWG DWVTCLSLAILAQGPLFNYLQ >gi|299857057|gb|ADWS01000007.1| GENE 139 121013 - 121780 318 255 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3835 NR:ns ## KEGG: EC55989_3835 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 255 1 255 255 515 100.0 1e-145 MQPSPAMQALIEQIYHTFRRYRVPQKFVVCCEYCLSQQEQKALRSTSLRAIPYSLINAWN SSPGPDPQNSDEVRYFLPRLLEFVAQGHFDNIHVVFSQRRINLANKENWRADERAILQRF ACQYMTDWVSGDEAVELQYMLEMFFRADIALAPLLDAINSVPGFWSTVSLACLLNRYCED YIRDNQDDIDNVITTQINAWARNNHPLLKERARQAIENPLKQPEPMTEYQVWEDDWIIDE CLCAMYDASSESPGK >gi|299857057|gb|ADWS01000007.1| GENE 140 121783 - 122493 324 236 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3836 NR:ns ## KEGG: EC55989_3836 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 236 1 236 236 492 100.0 1e-138 MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQALDEGEKFVGADGLEGL LRYNVTLNIGLTSSKVWPGFSLDTATISRLCACGADFGFDPYISDVPDVQCDLNTTNDVT VQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVLKDAWKFHNNNSLRGFRDKQAELKF YTLHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNAANARFVYQPFTRDQRARG >gi|299857057|gb|ADWS01000007.1| GENE 141 122509 - 124014 820 501 aa, chain - ## HITS:1 COG:ECs4272 KEGG:ns NR:ns ## COG: ECs4272 COG0226 # Protein_GI_number: 15833526 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 500 5 504 505 907 89.0 0 MQNRKWILTSLVMTFFGIPILAQFLAAVIAMLGVGLAGIIEVCNIFITPTIYLLLNIFML ALGALMLFFSGRVWADDSAPEKREIAVWRQCLFLVPALLTLGVWIIALHLADYQFHQMGA GWLADLMLPWLGVLLASLVGGEYWWLVIIPVGAHISFSLGYGWPTRYPLTGTSGLRCRNS LLFILLMLGFVAGYQAYLYKQLNPGVGVRENIDTWAWRPDKLNNQLTPLRGKPQIQFTQN WPRLDGATAAYPIYASAFYALSVLPEDFHEWEYLANSRTPEAYNKIVKGNADIIFVAQPS GGQKKRAEESGVTLIYTPFAREAFVFIVNADNPVNSLTEQQVRDIFSGAITNWRTVGGND QEIQTWQRPEDSGSQTVMQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYT FRYYATQMNDDKNIKLLAINGIAPTAENIRNGKYPYIVDAFMVTRENTTSETQKLLEWFL TPQGQSLVEDVGYVPMYKTLP >gi|299857057|gb|ADWS01000007.1| GENE 142 124142 - 126589 2753 815 aa, chain - ## HITS:1 COG:glgP KEGG:ns NR:ns ## COG: glgP COG0058 # Protein_GI_number: 16131302 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Escherichia coli K12 # 1 815 1 815 815 1660 100.0 0 MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNATLFAVRDRLVERWLRS NRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGALEAMGLNLEELIDEENDPG LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGSQKESPDYWLEYGNPWE FKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQIIPGYDTDATNTLRLWSAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSSTIQDILSR HYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRLLIDEHQFSWDDAFEVCCQVFSYTNHT LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDESNGRR VRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFTNVTNGVTPRRWLAVANPS LSAVLDEHLGRNWRTDLSLLNELQQHCDFPMVNHAVHQAKLENKKRLAEYIAQQLNVVVN PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKH IIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSN MKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEEL HQVLTQIGSGVFSPEDPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEW TAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVRL >gi|299857057|gb|ADWS01000007.1| GENE 143 126608 - 128041 1270 477 aa, chain - ## HITS:1 COG:ECs4274 KEGG:ns NR:ns ## COG: ECs4274 COG0297 # Protein_GI_number: 15833528 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 976 100.0 0 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRR DTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEM ASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLP WSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGR LSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSR LTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFS HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASG FVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK >gi|299857057|gb|ADWS01000007.1| GENE 144 128041 - 129336 1233 431 aa, chain - ## HITS:1 COG:ECs4275 KEGG:ns NR:ns ## COG: ECs4275 COG0448 # Protein_GI_number: 15833529 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 431 1 431 431 909 100.0 0 MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSN CINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLLPAQQRMKGENWYRGTADA VTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGV MAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVFDADYLYELLEEDDRDENSSHDF GKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMY DRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFC NIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENAEEDARRFYRSEEGIVLVTRE MLRKLGHKQER >gi|299857057|gb|ADWS01000007.1| GENE 145 129354 - 131327 1492 657 aa, chain - ## HITS:1 COG:glgX KEGG:ns NR:ns ## COG: glgX COG1523 # Protein_GI_number: 16131305 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Escherichia coli K12 # 1 657 1 657 657 1380 99.0 0 MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQEHRYDLPGHSGDIWHGY LPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIEGEFKDNPLLHAGHNEPDYR DNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKGLTYLHPEIPVEIRGTYKALG HPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETA LDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWT GCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNC PVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAA SSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKE GLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDW SQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQ ILLSDRFLIAINATLEVTEIVLPAGEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR >gi|299857057|gb|ADWS01000007.1| GENE 146 131324 - 133510 2487 728 aa, chain - ## HITS:1 COG:glgB KEGG:ns NR:ns ## COG: glgB COG0296 # Protein_GI_number: 16131306 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Escherichia coli K12 # 1 728 1 728 728 1507 100.0 0 MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDATDVWVIEPKTGRKLAKL ECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFGPLIQEMDAWLLSEGTHLR PYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIP GAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETASLICGLPEKVVQTEERKKANQFD APISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGY QPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHS DPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEG EWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYK WNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMP GDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQ RLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPV PRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLAT IWLVREAE >gi|299857057|gb|ADWS01000007.1| GENE 147 133783 - 134886 1125 367 aa, chain - ## HITS:1 COG:ECs4278 KEGG:ns NR:ns ## COG: ECs4278 COG0136 # Protein_GI_number: 15833532 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 746 100.0 0 MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL EALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVIT DGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMG HLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNFGVPLAGSLIPWIDKQLDNGQSR EEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEELLAAHNP WAKVVPNDREITMRELTPAAVTGTLTTPVGRLRKLNMGPEFLSAFTVGDQLLWGAAEPLR RMLRQLA >gi|299857057|gb|ADWS01000007.1| GENE 148 135079 - 135672 642 197 aa, chain + ## HITS:1 COG:ECs4279 KEGG:ns NR:ns ## COG: ECs4279 COG2095 # Protein_GI_number: 15833533 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 294 100.0 9e-80 MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVRELLIALLVMLVFLFAGEK ILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAGEEPFIVPLAIPLVAGPTI LATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFLRLLGEKGVNALERLMGLILV MMATQMFLDGIRMWMKG >gi|299857057|gb|ADWS01000007.1| GENE 149 135729 - 137006 1462 425 aa, chain - ## HITS:1 COG:STM3541 KEGG:ns NR:ns ## COG: STM3541 COG2610 # Protein_GI_number: 16766827 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Salmonella typhimurium LT2 # 1 425 22 446 446 674 97.0 0 MKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLGFLAVVVALGAMFGKILHE TGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLV KLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFI SRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFE FIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLV DSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGA QMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIA FQLLS >gi|299857057|gb|ADWS01000007.1| GENE 150 137073 - 137561 513 162 aa, chain - ## HITS:1 COG:ECs4286 KEGG:ns NR:ns ## COG: ECs4286 COG3265 # Protein_GI_number: 15833540 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 325 100.0 3e-89 MGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAA FAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQM LVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIEVIKKGK >gi|299857057|gb|ADWS01000007.1| GENE 151 137739 - 138734 1041 331 aa, chain - ## HITS:1 COG:ECs4287 KEGG:ns NR:ns ## COG: ECs4287 COG1609 # Protein_GI_number: 15833541 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 652 100.0 0 MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSN ATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNI DGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAVGFDNFEAARQMTTAIIARGH RHIAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVEQSSSYSSGIELIRQARREYPQL DGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSI GAERLLARIRGESVTPKMLDLGFTLSPGGSI >gi|299857057|gb|ADWS01000007.1| GENE 152 138958 - 139653 913 231 aa, chain - ## HITS:1 COG:yhhW KEGG:ns NR:ns ## COG: yhhW COG1741 # Protein_GI_number: 16131311 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Escherichia coli K12 # 1 231 1 231 231 471 100.0 1e-133 MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVINDDVIEAGQGFGTHPHK DMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIM PEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDMELYRWALLKDEQSVHQIAAE RRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHADSDSEVLLFDLPPV >gi|299857057|gb|ADWS01000007.1| GENE 153 139776 - 140813 1128 345 aa, chain - ## HITS:1 COG:yhhX KEGG:ns NR:ns ## COG: yhhX COG0673 # Protein_GI_number: 16131312 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 345 1 345 345 702 100.0 0 MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEV LNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVT PYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVAETKPGLPQDGAFYGLGVHTM DQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHG KKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGVLEYVNDEGVTVREEMKPEMGDYGR VYDALYQTITHGAPNYVKESEVLTNLEILERGFEQASPSTVTLAK >gi|299857057|gb|ADWS01000007.1| GENE 154 140715 - 140912 146 65 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3838 NR:ns ## KEGG: ECS88_3838 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 62 20 81 86 123 98.0 2e-27 MRDMPAILAVKYIRQMVTGGAFAEANKGAVDDHDFVLFKVVIYTLAQSGRGSYWSAHNEH KHSRG >gi|299857057|gb|ADWS01000007.1| GENE 155 141146 - 141634 347 162 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase [Sphaerobacter thermophilus DSM 20745] # 1 162 1 163 179 138 46 2e-31 MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQERLADRPGIKQLVACIDG DVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTV FVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMARVK >gi|299857057|gb|ADWS01000007.1| GENE 156 141868 - 143046 141 392 aa, chain + ## HITS:1 COG:yhhZ_1 KEGG:ns NR:ns ## COG: yhhZ_1 COG3157 # Protein_GI_number: 16131314 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli K12 # 1 170 1 170 170 335 99.0 1e-91 MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSLLNNINNTGLGSQFHGI TFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRWEKYYYIQLRGAFLSAIHHQIIE NQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFLPNSKNQTNNRFKTLNSKAIG RLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEKTAGIAIATASILLTKRSNVDTY TEINSYLGKLRGQQKLLDGIEIIEIIYIKRPSKDLANLRKEFNKTVRKNFLIKLAKTSEA SGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGTNDFENLVLIENEPYHKVFTNMQSRIA KGILVGESKITPWAIPSGSIYPPMKNIMDHTK >gi|299857057|gb|ADWS01000007.1| GENE 157 143082 - 143537 218 151 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3588 NR:ns ## KEGG: ECIAI1_3588 # Name: yrhA # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 151 14 164 164 243 100.0 2e-63 MNDLDYPFEAPLKESFIESIIQIEFNSNSTNCLEKLCNEVSILFKNQPDYLTFLRAMDGF EVNGLRLFSLSIPEPSVKNLFAVNEFYRNNDDFINPDLQERLVIGDDSISIFTYDIKSNF FEIRDNIGTENIFSSFSDFSSFLNEIMDSCS >gi|299857057|gb|ADWS01000007.1| GENE 158 143632 - 143787 69 51 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3853 NR:ns ## KEGG: EC55989_3853 # Name: yrhD # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 51 4 54 54 89 100.0 4e-17 MEKLTTELHSLSEMDRRHVVSILAEIANGYDDFNDMLIYLEFYPNHKILIS >gi|299857057|gb|ADWS01000007.1| GENE 159 143987 - 144271 245 94 aa, chain + ## HITS:1 COG:no KEGG:B21_03248 NR:ns ## KEGG: B21_03248 # Name: yrhB # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 94 1 94 94 189 100.0 2e-47 MITYHDAFAKANHYLDDADLPVVITLHGRFSQGWYFCFEAREFLETGDEAARLAGNAPFI IDKDSGEIHSLGTAKPLEEYLQDYEIKKATFGLP >gi|299857057|gb|ADWS01000007.1| GENE 160 144309 - 146051 1851 580 aa, chain - ## HITS:1 COG:ECs4293 KEGG:ns NR:ns ## COG: ECs4293 COG0405 # Protein_GI_number: 15833547 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Escherichia coli O157:H7 # 1 580 1 581 581 1098 98.0 0 MIKPTFLRRVAIAALLSGSCFSAAAAPPAPPVSYGVEEDVFHPVRAKQGMVASVDATATQ VGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSKNGNTTAIDFREMAPAK ATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDG FIVNDALADDLKTYGSEVLPNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPD EFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPISGDYRGYQVYSMPPPSSGGIHI VQILNILENFDMKKYGFGSADAMQIMAEAEKYVYADRSEYLGDPDFVKVPWQALTNKAYA KSIADQIDINKAKPSSEIRPGKLAPYESNQTTHYSVVDKDGNAVAVTYTLNTTFGTGIVA GESGILLNNQMDDFSAKPGVPNVYRLVGGDANAVGPNKRPLSSMSPTIVVKDGKTWLVTG SPGGSRIITTVLQMVVNSIDYGMNVAEATNAPRFHHQWLPDELRVEKGFSPDTLKLLEAK GQKVALKEAMGSTQSIMVGPDGELYGASDPRSVDDLTAGY >gi|299857057|gb|ADWS01000007.1| GENE 161 146171 - 146611 337 146 aa, chain + ## HITS:1 COG:no KEGG:S4297 NR:ns ## KEGG: S4297 # Name: yhhA # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 146 1 146 146 157 100.0 1e-37 MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQTQQIQQKGMLNQQLKT QTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGGMLNSNRNPDSSLNQQHML PERRNGDMLNQPSTPQPDIPLKTIGP >gi|299857057|gb|ADWS01000007.1| GENE 162 146598 - 147341 821 247 aa, chain - ## HITS:1 COG:ECs4295 KEGG:ns NR:ns ## COG: ECs4295 COG0584 # Protein_GI_number: 15833549 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 494 97.0 1e-140 MNNWPYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLER TSNGWGVAGELNWQDLLRVDAGSWYSKAFKGEPLPLLSQVAERCREHGMMANIEIKPTTG TGPLTGKMVALAARQLWAGMTPPLLSSFEIDALEAAQLAAPELPRGLLLDEWRDDWRELT ARLGCVSIHLNHKLLDKVRVMQLKDAGLRILVYTVNKPQRAAELLRWGVDCICTDAIDVI GPNFTAQ >gi|299857057|gb|ADWS01000007.1| GENE 163 147338 - 148408 1384 356 aa, chain - ## HITS:1 COG:ECs4296 KEGG:ns NR:ns ## COG: ECs4296 COG3839 # Protein_GI_number: 15833550 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 356 14 369 369 692 98.0 0 MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMIGPSGCGKSTLLRMVAGLERVTEGD IWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAAR ILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQL HRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAM NLLTGRVNNEGTHFELDGGIVLPLNGGYRQYAGRKMTLGIRPEHIALSSQAEGGVPLVMD TLEILGADNLAHGRWSEQKLVVRLAHQERPTAGSTLWLHLPENQLHLFDGETGQRV >gi|299857057|gb|ADWS01000007.1| GENE 164 148410 - 149255 868 281 aa, chain - ## HITS:1 COG:ECs4297 KEGG:ns NR:ns ## COG: ECs4297 COG0395 # Protein_GI_number: 15833551 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Escherichia coli O157:H7 # 1 281 1 281 281 483 100.0 1e-136 MIENRPWLTIFSHTMLILGIAVILFPLYVAFVAATLDKQAVYAAPMTLIPGTHLLENIHN IWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAIVWFRFPLRNLFFWMIFIT LMLPVEVRIFPTVEVIANLKMLDSYAGLTLPLMASATATFLFRQFFMTLPDELVEAARID GASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWPLLIITDVDLGTTVAGIKGMIAT GEGTTEWNSVMAAMLLTLIPPVVIVLVMQRAFVRGLVDSEK >gi|299857057|gb|ADWS01000007.1| GENE 165 149252 - 150139 941 295 aa, chain - ## HITS:1 COG:ugpA KEGG:ns NR:ns ## COG: ugpA COG1175 # Protein_GI_number: 16131324 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 1 295 1 295 295 485 100.0 1e-137 MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFV TLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPA VAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAA LQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSG GPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKVRYQ >gi|299857057|gb|ADWS01000007.1| GENE 166 150237 - 151553 1711 438 aa, chain - ## HITS:1 COG:ECs4299 KEGG:ns NR:ns ## COG: ECs4299 COG1653 # Protein_GI_number: 15833553 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 438 1 438 438 843 99.0 0 MKPLHYTASALALGLALMGNAQAVTTIPFWHSMEGELGKEVDSLAQRFNAENPDYKIVPT YKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIKPVYDVFKEAGIQFDESQF VPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLK ASGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEM NKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLANIREYAKFNYGVGMMPYDADAKDAP QNAIIGGASLWVMQGKDKETYTGVAKFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQ GFYEKNPGADTATRQMLNKPPLPFTKGLRLGNMPQIRVIVDEELESVWTGKKTPQQALDT AVERGNQLLRRFEQSTKS >gi|299857057|gb|ADWS01000007.1| GENE 167 151949 - 152662 268 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 216 1 218 245 107 29 3e-22 MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSG RIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWV YELFPRLHERRVQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTI EQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLGG >gi|299857057|gb|ADWS01000007.1| GENE 168 152664 - 153431 258 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 245 1 230 245 103 25 4e-21 MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGG TILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKT PSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEP AAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQ IRNNPDVIRAYLGEA >gi|299857057|gb|ADWS01000007.1| GENE 169 153428 - 154705 1471 425 aa, chain - ## HITS:1 COG:livM KEGG:ns NR:ns ## COG: livM COG4177 # Protein_GI_number: 16131328 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 425 1 425 425 718 99.0 0 MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDIRWQWVFIGTAVVFFFQL LRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVAWPFMVSRGTVDIATLTMI YIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPIAGLMAAAAGF LLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAR EGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIA CRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMG SQFAVILAAILLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNGAA KGEQA >gi|299857057|gb|ADWS01000007.1| GENE 170 154702 - 155628 1260 308 aa, chain - ## HITS:1 COG:ECs4304 KEGG:ns NR:ns ## COG: ECs4304 COG0559 # Protein_GI_number: 15833558 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Escherichia coli O157:H7 # 1 308 1 308 308 490 99.0 1e-138 MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAA LMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQN YVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTVFIRYSRM GRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGM KAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGIL GRPEVEKV >gi|299857057|gb|ADWS01000007.1| GENE 171 155676 - 156785 1313 369 aa, chain - ## HITS:1 COG:livK KEGG:ns NR:ns ## COG: livK COG0683 # Protein_GI_number: 16131330 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Escherichia coli K12 # 1 369 1 369 369 707 100.0 0 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH ADGSSTAAK >gi|299857057|gb|ADWS01000007.1| GENE 172 157209 - 157592 391 127 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4179 NR:ns ## KEGG: ECO103_4179 # Name: yhhK # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 127 1 127 127 247 100.0 8e-65 MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARFNERLLAAVRVTLSGTE GALDSLRVREVTRRRGVGQYLLEEVLRNNPAVSCWWMADAGVEDRGVMTAFMQALGFTAQ QGGWEKR >gi|299857057|gb|ADWS01000007.1| GENE 173 157791 - 158894 1411 367 aa, chain - ## HITS:1 COG:ECs4309 KEGG:ns NR:ns ## COG: ECs4309 COG0683 # Protein_GI_number: 15833563 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Escherichia coli O157:H7 # 1 367 20 386 386 706 100.0 0 MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKG GIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI TPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARA VQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAG LKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFV WTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHAN GTATDAK >gi|299857057|gb|ADWS01000007.1| GENE 174 159165 - 160019 1031 284 aa, chain - ## HITS:1 COG:ECs4310 KEGG:ns NR:ns ## COG: ECs4310 COG0568 # Protein_GI_number: 15833564 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 514 100.0 1e-146 MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRF VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM TFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDII RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA >gi|299857057|gb|ADWS01000007.1| GENE 175 160264 - 161322 1009 352 aa, chain - ## HITS:1 COG:ftsX KEGG:ns NR:ns ## COG: ftsX COG2177 # Protein_GI_number: 16131334 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli K12 # 1 352 1 352 352 687 100.0 0 MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKPVNRKTNVFNEQVRYAF HGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAATQYYPSPQITVYLQKTLD DDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGGALDMLEENPLPAVAVVIPKL DFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALTGLVGRVSAMIGVLMVAAVFLVI GNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGGALLGFSGALLSLILSEILVLRLSS AVAEVAQVFGTKFDINGLSFDECLLLLLVCSMIGWVAAWLATVQHLRHFTPE >gi|299857057|gb|ADWS01000007.1| GENE 176 161315 - 161983 348 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 216 4 220 223 138 36 1e-31 MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIW FSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSA ALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLF EEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGGVGHE >gi|299857057|gb|ADWS01000007.1| GENE 177 161986 - 163482 748 498 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 199 495 21 321 336 292 48 6e-78 MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQTVVEEIVQAQEPVKASEQAVEEQPQAHT EAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPEPVVEETPEPVAIEREELPLPEDVNA EEVSPEEWQAEAETVEIVEAAEEEAAKEEITDEELEAQALAAEAAEEAVIVVPPAEEEQP VEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIAD VGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKTPFVILMV GVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGAD SASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTI DASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIED LRPFKADDFIEALFARED >gi|299857057|gb|ADWS01000007.1| GENE 178 163632 - 164228 190 198 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 12 194 13 199 199 77 27 3e-13 MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCF AGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTP HNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAG QVAYRLYQREAQGESDAD >gi|299857057|gb|ADWS01000007.1| GENE 179 164218 - 164487 365 89 aa, chain + ## HITS:1 COG:yhhL KEGG:ns NR:ns ## COG: yhhL COG3776 # Protein_GI_number: 16131338 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 89 1 89 89 146 98.0 8e-36 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP QMTTAEKVRIFLFGVFELLVWQKKFKVKK >gi|299857057|gb|ADWS01000007.1| GENE 180 164490 - 164849 381 119 aa, chain - ## HITS:1 COG:no KEGG:B21_03269 NR:ns ## KEGG: B21_03269 # Name: yhhM # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 119 1 119 119 218 99.0 7e-56 MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQ QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ >gi|299857057|gb|ADWS01000007.1| GENE 181 164990 - 165616 679 208 aa, chain + ## HITS:1 COG:STM3575 KEGG:ns NR:ns ## COG: STM3575 COG3714 # Protein_GI_number: 16766861 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 302 91.0 3e-82 MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLC ASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAI IWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHY RRRFRADNAIAAACYFAGHFLIVRSLYL >gi|299857057|gb|ADWS01000007.1| GENE 182 165690 - 167888 2280 732 aa, chain + ## HITS:1 COG:zntA KEGG:ns NR:ns ## COG: zntA COG2217 # Protein_GI_number: 16131341 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli K12 # 1 732 1 732 732 1256 99.0 0 MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSSPTLSENVSGTRYSWKVSGMDCA ACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGYSLRDEQAADEP QASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATTLVGLYPIARQALRLIKSGSY FAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVSALMALKPETAT RLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGD KVPAGATSVDRLVTLEVLSEPGASAIDRILKLIEEAEERRAPIERFIDRFSRIYTPAIMA VALLVTLVPPLLFAASWQEWIYKGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKG GAALEQLGRVTQVAFDKTGTLTVGKPRVTAIHPATGISESELLTLAAAVEQGATHPLAQA IVREAQVAELAIPTAESQRALVGSGIEAQVNGERVLICAAGKHPADAFAGLINELESAGQ TVVLVVRNDDVLGIIALQDTLRADAATAISELNALGVKGVILTGDNPRAAAAIAGELGLE FKAGLLPEDKVKAVTKLNQHAPLAMVGDGINDAPAMKAAAIGIAMGSGTDVALETADAAL THNHLRGLVQMIELARATHANIRQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVL VTANALRLLRRR >gi|299857057|gb|ADWS01000007.1| GENE 183 167990 - 168235 326 81 aa, chain - ## HITS:1 COG:ECs4319 KEGG:ns NR:ns ## COG: ECs4319 COG0425 # Protein_GI_number: 15833573 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 81 1 81 81 159 100.0 1e-39 MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFME HELVAKETDGLPYRYLIRKGG >gi|299857057|gb|ADWS01000007.1| GENE 184 168456 - 169121 641 221 aa, chain + ## HITS:1 COG:ECs4320 KEGG:ns NR:ns ## COG: ECs4320 COG1738 # Protein_GI_number: 15833574 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 221 1 221 221 373 100.0 1e-103 MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTV RIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYA LGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIAL VDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS >gi|299857057|gb|ADWS01000007.1| GENE 185 169194 - 169751 742 185 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4192 NR:ns ## KEGG: ECO103_4192 # Name: dcrB # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 185 15 199 199 324 100.0 1e-87 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN TLVIQ >gi|299857057|gb|ADWS01000007.1| GENE 186 169755 - 170972 1251 405 aa, chain - ## HITS:1 COG:yhhS KEGG:ns NR:ns ## COG: yhhS COG0477 # Protein_GI_number: 16131345 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 405 15 419 419 667 99.0 0 MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVIS LQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLGYLTAGLTASLPVISLLLLCLG RVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVVFYHWGGLQ ALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLGSVWLYGMALALASAGFGVIATF ITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPNGINRIGGLNVAMICFSVEIIGLLLVGV ATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVPQQNQGAALATYTVFMDLSLGVTGPLA GLVMSWAGVPVIYLAAAGLVAIALLLTWRLKKRPPEHVPEAASSS >gi|299857057|gb|ADWS01000007.1| GENE 187 171104 - 172153 985 349 aa, chain + ## HITS:1 COG:yhhT KEGG:ns NR:ns ## COG: yhhT COG0628 # Protein_GI_number: 16131346 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli K12 # 1 349 28 376 376 581 99.0 1e-166 METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQ RPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMS PERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQ IHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIG AVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLL IWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG >gi|299857057|gb|ADWS01000007.1| GENE 188 172208 - 172795 503 195 aa, chain + ## HITS:1 COG:ECs4342 KEGG:ns NR:ns ## COG: ECs4342 COG2091 # Protein_GI_number: 15833596 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Escherichia coli O157:H7 # 1 195 1 195 195 386 100.0 1e-107 MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHTLSPLPEIIYGEQGKPA FAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWRWLANAVFSLGEHAEMDAV HPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSSLSVSHCQLENLSLAICTPTP FTLTADSVQWIDSVN >gi|299857057|gb|ADWS01000007.1| GENE 189 172705 - 172881 78 58 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C3992 NR:ns ## KEGG: UTI89_C3992 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 58 1 58 58 102 100.0 3e-21 MAEISMTILSIRHTDYLFWINRWAVGWADQLTESIHCTLSAVSVKGVGVQIARLKFSS >gi|299857057|gb|ADWS01000007.1| GENE 190 172906 - 174480 1726 524 aa, chain + ## HITS:1 COG:nikA KEGG:ns NR:ns ## COG: nikA COG0747 # Protein_GI_number: 16131348 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 524 1 524 524 1041 99.0 0 MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLYTPNQMFAQSMVYEPLV KYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRH AWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRPFRFIAPSQFKNHETMNGIKA PIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLY GNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALNTAKAPTNELAVREALNYAVNKKSL IDNALYGTQQVADTLFAPSVPYANLGLKPRQYDPQKAKELLEKAGWTLPAGKDIREKNGQ PLRIELSFIGTDALSKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTW GAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRL HDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQIKPVKP >gi|299857057|gb|ADWS01000007.1| GENE 191 174480 - 175424 254 314 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 68 304 43 310 320 102 26 1e-20 MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNLPPTPEMLASTRTMLGL DQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATLELAGAALVLILLTSVPLG IWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSVYLQWLPAMGYGGWQHIILPA VSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLNDKQTERRHILRNASLPMITAVGM HIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLMMVVVFVVCNLIVDLLNA ALDPRIRRHEGAHA >gi|299857057|gb|ADWS01000007.1| GENE 192 175421 - 176254 1076 277 aa, chain + ## HITS:1 COG:ECs4345 KEGG:ns NR:ns ## COG: ECs4345 COG1173 # Protein_GI_number: 15833599 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 461 100.0 1e-130 MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLG RDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGRVDQATMRVADMFMTFPTS ILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVF VDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPL QMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHAH >gi|299857057|gb|ADWS01000007.1| GENE 193 176254 - 177018 357 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 5 240 9 258 563 142 34 3e-74 MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQT AGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTA AIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARIL DLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGKIVEQGDVETLFNAPKHTVTRSL VSAHLALYGMELAS >gi|299857057|gb|ADWS01000007.1| GENE 194 177015 - 177821 405 268 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 27 241 294 509 563 160 40 3e-74 MTLLNVCGLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALLGRSGCGKSTLARLLVG LESPSQGNISWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREILREPMRHLL SLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVS NLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQVVGDKL TFSSDAGRVLQNAVLPAFPVRRRTTEKV >gi|299857057|gb|ADWS01000007.1| GENE 195 177827 - 178228 447 133 aa, chain + ## HITS:1 COG:ECs4348 KEGG:ns NR:ns ## COG: ECs4348 COG0864 # Protein_GI_number: 15833602 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 205 100.0 2e-53 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG VRHGHLQCLPKED >gi|299857057|gb|ADWS01000007.1| GENE 196 178431 - 181692 2364 1087 aa, chain + ## HITS:1 COG:rhsC KEGG:ns NR:ns ## COG: rhsC COG3209 # Protein_GI_number: 16128676 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 1087 1 1087 1397 2088 97.0 0 MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPG ETDIAQPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRS LYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQ GPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDG AGRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDP EYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTSRPEIRYR YDSDGRVTEQLNPAGLSYTYQYEKDHITITDSLNRREVLHTQGEAGLKRVVKKEHADGSV TQSQFDAVGRLRTQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHSQLTSATGP DGLEMRRKYDEYGRLIQETAPDGDITRYRYDNPHSDLPCATDDATGSRKTMTWSRYGQLL SFTDCSGYVTRYDHDRFGQVTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNAAG DLTTVIAPDGSRNGTQYDAWGKAICTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDV LDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVNGETAERWQY DERGWLTDISHISEGHRVAVYYGYDEKGRLTGERQTVHHPETEALLWQHETRHAYNAQGL ANRCIPDSLPAVEWLAYGSGYLAGMKLGDTPLVDFTRDRLHRETLRSFGRYELTTAYTPA GQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIP YATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRYGRLTEKTDLIPEGGIRTD DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR KPQVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQ SGGEDGG Prediction of potential genes in microbial genomes Time: Sun May 15 22:00:56 2011 Seq name: gi|299857056|gb|ADWS01000008.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont7.1, whole genome shotgun sequence Length of sequence - 177619 bp Number of predicted genes - 170, with homology - 168 Number of transcription units - 103, operones - 38 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 518 350 ## COG3209 Rhs family protein - Prom 561 - 620 10.0 - Term 888 - 941 5.5 2 2 Op 1 11/0.048 - CDS 948 - 3362 2341 ## COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 3 2 Op 2 . - CDS 3359 - 4045 313 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Prom 3702 - 3761 1.9 4 3 Op 1 5/0.190 + CDS 3983 - 4639 542 ## COG2755 Lysophospholipase L1 and related esterases 5 3 Op 2 3/0.595 + CDS 4629 - 5438 226 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 6 3 Op 3 . + CDS 5499 - 6353 1304 ## COG3118 Thioredoxin domain-containing protein + Term 6388 - 6431 9.1 - Term 6365 - 6415 12.8 7 4 Op 1 4/0.476 - CDS 6416 - 7195 756 ## COG0390 ABC-type uncharacterized transport system, permease component 8 4 Op 2 . - CDS 7182 - 7859 174 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 7886 - 7945 3.8 + Prom 7850 - 7909 4.0 9 5 Op 1 26/0.000 + CDS 8005 - 8922 1350 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 10 5 Op 2 . + CDS 8919 - 9377 394 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 11 6 Tu 1 . - CDS 9378 - 9785 393 ## COG0789 Predicted transcriptional regulators - Prom 9825 - 9884 3.8 12 7 Op 1 4/0.476 - CDS 9910 - 11199 1412 ## COG0531 Amino acid transporters 13 7 Op 2 . - CDS 11205 - 12137 916 ## COG2066 Glutaminase - Prom 12219 - 12278 3.3 + Prom 12097 - 12156 7.1 14 8 Tu 1 . + CDS 12399 - 14903 2687 ## COG2217 Cation transport ATPase + Term 14920 - 14951 2.3 15 9 Tu 1 . - CDS 15017 - 15412 350 ## COG3093 Plasmid maintenance system antidote protein - Prom 15541 - 15600 1.7 + Prom 15353 - 15412 2.7 16 10 Tu 1 5/0.190 + CDS 15496 - 16290 756 ## COG3735 Uncharacterized protein conserved in bacteria + Term 16343 - 16391 -0.1 + Prom 16294 - 16353 7.6 17 11 Tu 1 . + CDS 16494 - 16973 720 ## COG2606 Uncharacterized conserved protein + Term 16979 - 17014 7.4 18 12 Tu 1 . - CDS 17010 - 18662 1809 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 18707 - 18766 2.6 19 13 Tu 1 . + CDS 18880 - 20100 1165 ## COG0477 Permeases of the major facilitator superfamily + Term 20107 - 20146 8.0 + Prom 20177 - 20236 5.2 20 14 Tu 1 . + CDS 20338 - 22014 500 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 + Term 22066 - 22131 3.1 - Term 22052 - 22117 3.1 21 15 Tu 1 . - CDS 22147 - 23451 1360 ## COG0524 Sugar kinases, ribokinase family - Prom 23544 - 23603 1.7 + Prom 23423 - 23482 2.7 22 16 Tu 1 . + CDS 23603 - 24562 718 ## COG0657 Esterase/lipase + Term 24595 - 24646 7.1 - Term 24498 - 24534 2.0 23 17 Tu 1 . - CDS 24559 - 25521 897 ## COG0276 Protoheme ferro-lyase (ferrochelatase) - Prom 25546 - 25605 3.9 - Term 25630 - 25661 2.5 24 18 Tu 1 . - CDS 25757 - 26401 967 ## COG0563 Adenylate kinase and related kinases - Prom 26442 - 26501 3.9 - Term 26537 - 26576 8.3 25 19 Tu 1 . - CDS 26582 - 28456 2685 ## COG0326 Molecular chaperone, HSP90 family - Prom 28478 - 28537 3.3 - Term 28519 - 28564 9.0 26 20 Op 1 23/0.000 - CDS 28566 - 29171 525 ## COG0353 Recombinational DNA repair protein (RecF pathway) 27 20 Op 2 30/0.000 - CDS 29171 - 29500 227 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 - Term 29523 - 29551 1.6 28 20 Op 3 8/0.048 - CDS 29553 - 31484 1886 ## COG2812 DNA polymerase III, gamma/tau subunits - Prom 31521 - 31580 2.5 - Term 31525 - 31561 2.2 29 21 Tu 1 . - CDS 31613 - 32164 824 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 30 22 Tu 1 . - CDS 32317 - 32694 324 ## COG2832 Uncharacterized protein conserved in bacteria - Prom 32722 - 32781 4.0 + Prom 32681 - 32740 6.3 31 23 Op 1 . + CDS 32764 - 33291 507 ## COG3923 Primosomal replication protein N'' 32 23 Op 2 . + CDS 33305 - 33466 199 ## ECS88_0463 hypothetical protein - Term 33508 - 33544 2.4 33 24 Tu 1 . - CDS 33678 - 37040 3671 ## COG3264 Small-conductance mechanosensitive channel - Prom 37086 - 37145 3.6 34 25 Tu 1 . + CDS 37046 - 37237 69 ## gi|300919868|ref|ZP_07136335.1| conserved domain protein + Term 37424 - 37458 0.6 - Term 37125 - 37154 1.4 35 26 Tu 1 . - CDS 37168 - 37815 492 ## COG1309 Transcriptional regulator - Prom 37876 - 37935 5.0 + Prom 37819 - 37878 3.6 36 27 Op 1 27/0.000 + CDS 37957 - 39150 1218 ## COG0845 Membrane-fusion protein 37 27 Op 2 . + CDS 39173 - 42322 3310 ## COG0841 Cation/multidrug efflux pump + Term 42342 - 42369 1.5 38 28 Op 1 . + CDS 42868 - 43242 254 ## ECDH10B_0417 hypothetical protein 39 28 Op 2 . + CDS 43268 - 43486 184 ## UTI89_C0487 hemolysin expression-modulating protein + Term 43580 - 43620 -0.5 + Prom 43488 - 43547 5.8 40 29 Tu 1 . + CDS 43658 - 44209 395 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Prom 44230 - 44289 3.4 41 30 Tu 1 . + CDS 44325 - 44795 429 ## G2583_0570 hypothetical protein + Prom 44874 - 44933 4.6 42 31 Tu 1 . + CDS 44953 - 46509 1204 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains + Term 46516 - 46563 -0.9 - Term 46397 - 46434 2.2 43 32 Tu 1 . - CDS 46551 - 46904 473 ## COG5507 Uncharacterized conserved protein - 5S_RRNA 47015 - 47128 100.0 # ECU82664 [D:55896..56009] # 4.5S ribosomal RNA # Escherichia coli # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. 44 33 Tu 1 . + CDS 47283 - 47594 267 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase + Term 47707 - 47743 2.7 - Term 47583 - 47614 4.1 45 34 Tu 1 . - CDS 47625 - 48197 428 ## COG3126 Uncharacterized protein conserved in bacteria - Prom 48256 - 48315 2.6 + Prom 48316 - 48375 2.9 46 35 Tu 1 . + CDS 48415 - 49275 682 ## COG1946 Acyl-CoA thioesterase + Term 49281 - 49318 6.1 - Term 49261 - 49315 12.8 47 36 Op 1 24/0.000 - CDS 49323 - 50609 1511 ## COG0004 Ammonia permease 48 36 Op 2 4/0.476 - CDS 50639 - 50977 484 ## COG0347 Nitrogen regulatory protein PII - Prom 51075 - 51134 4.8 - Term 51086 - 51121 4.5 49 37 Op 1 35/0.000 - CDS 51158 - 52939 225 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 50 37 Op 2 3/0.595 - CDS 52932 - 54704 205 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 51 37 Op 3 1/0.881 - CDS 54734 - 55192 365 ## COG1522 Transcriptional regulators - Prom 55223 - 55282 5.5 - Term 55300 - 55327 1.5 52 38 Tu 1 . - CDS 55345 - 56163 658 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 56194 - 56253 2.6 + Prom 56179 - 56238 3.0 53 39 Op 1 5/0.190 + CDS 56263 - 57963 918 ## COG4533 ABC-type uncharacterized transport system, periplasmic component + Term 57987 - 58015 -0.0 54 39 Op 2 . + CDS 58028 - 58723 691 ## COG0603 Predicted PP-loop superfamily ATPase 55 40 Op 1 5/0.190 - CDS 58775 - 59173 375 ## COG0824 Predicted thioesterase - Prom 59204 - 59263 2.7 56 40 Op 2 6/0.048 - CDS 59267 - 59638 539 ## COG1555 DNA uptake protein and related DNA-binding proteins - Prom 59685 - 59744 2.3 - Term 59708 - 59745 7.1 57 41 Tu 1 . - CDS 59789 - 61660 2356 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Prom 61782 - 61841 3.5 - Term 61785 - 61816 2.5 58 42 Op 1 16/0.000 - CDS 61852 - 62124 438 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 62180 - 62239 3.4 - Term 62259 - 62300 8.5 59 42 Op 2 18/0.000 - CDS 62333 - 64687 3103 ## COG0466 ATP-dependent Lon protease, bacterial type - Prom 64797 - 64856 4.5 - Term 64811 - 64841 2.7 60 42 Op 3 24/0.000 - CDS 64875 - 66149 238 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 61 42 Op 4 . - CDS 66275 - 66898 638 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 66932 - 66991 5.2 62 43 Tu 1 . + CDS 66837 - 67076 79 ## gi|300820318|ref|ZP_07100470.1| hypothetical protein HMPREF9346_00112 - Term 67073 - 67110 6.0 63 44 Tu 1 . - CDS 67144 - 68442 1911 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 68581 - 68640 6.0 - Term 68695 - 68733 6.2 64 45 Tu 1 . - CDS 68786 - 69103 312 ## COG0271 Stress-induced morphogen (activity unknown) - Prom 69152 - 69211 4.8 + Prom 69307 - 69366 3.4 65 46 Op 1 1/0.881 + CDS 69408 - 69986 722 ## COG3056 Uncharacterized lipoprotein 66 46 Op 2 5/0.190 + CDS 70030 - 71505 1316 ## COG0477 Permeases of the major facilitator superfamily + Prom 71865 - 71924 7.8 67 47 Op 1 25/0.000 + CDS 71967 - 72914 930 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 68 47 Op 2 20/0.000 + CDS 72936 - 74927 2029 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 69 47 Op 3 16/0.000 + CDS 74917 - 75531 647 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 70 47 Op 4 7/0.048 + CDS 75531 - 75860 318 ## COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 71 47 Op 5 . + CDS 75875 - 76762 895 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) + Term 76776 - 76815 3.2 + Prom 76780 - 76839 3.0 72 48 Op 1 . + CDS 76947 - 77258 238 ## ECB_00378 hypothetical protein 73 48 Op 2 . + CDS 77242 - 77784 310 ## SSON_0409 putative acetyltransferase + Term 77886 - 77927 5.3 74 49 Tu 1 . - CDS 77840 - 78745 478 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 78934 - 78993 6.1 + Prom 78974 - 79033 6.8 75 50 Tu 1 . + CDS 79183 - 80547 1527 ## COG0477 Permeases of the major facilitator superfamily + Term 80670 - 80697 -0.8 - Term 80492 - 80540 2.5 76 51 Tu 1 . - CDS 80675 - 81166 695 ## COG1666 Uncharacterized protein conserved in bacteria - Prom 81192 - 81251 3.0 + Prom 81162 - 81221 2.9 77 52 Op 1 4/0.476 + CDS 81334 - 82245 738 ## COG1893 Ketopantoate reductase 78 52 Op 2 . + CDS 82208 - 82798 703 ## COG0693 Putative intracellular protease/amidase 79 53 Tu 1 . - CDS 82852 - 84300 1587 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase - Prom 84495 - 84554 3.5 + Prom 84244 - 84303 3.1 80 54 Op 1 22/0.000 + CDS 84506 - 84748 382 ## COG1722 Exonuclease VII small subunit 81 54 Op 2 13/0.024 + CDS 84748 - 85647 808 ## COG0142 Geranylgeranyl pyrophosphate synthase 82 54 Op 3 . + CDS 85672 - 87534 1946 ## COG1154 Deoxyxylulose-5-phosphate synthase - Term 87459 - 87521 1.2 83 55 Tu 1 . - CDS 87566 - 87715 75 ## + Prom 87569 - 87628 3.8 84 56 Tu 1 . + CDS 87714 - 88688 1020 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Term 88680 - 88733 5.8 85 57 Op 1 12/0.024 - CDS 88742 - 89260 622 ## COG1267 Phosphatidylglycerophosphatase A and related proteins 86 57 Op 2 11/0.048 - CDS 89238 - 90215 1048 ## COG0611 Thiamine monophosphate kinase 87 57 Op 3 17/0.000 - CDS 90293 - 90712 499 ## COG0781 Transcription termination factor 88 57 Op 4 6/0.048 - CDS 90732 - 91202 609 ## COG0054 Riboflavin synthase beta-chain 89 57 Op 5 14/0.024 - CDS 91291 - 92394 811 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 90 57 Op 6 . - CDS 92398 - 92847 453 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 92874 - 92933 4.9 + Prom 92914 - 92973 3.1 91 58 Tu 1 . + CDS 92998 - 93537 425 ## APECO1_1598 hypothetical protein + Term 93544 - 93584 2.1 + Prom 93699 - 93758 7.7 92 59 Tu 1 . + CDS 93836 - 94720 1216 ## COG3248 Nucleoside-binding outer membrane protein + Term 94724 - 94768 8.5 - Term 94717 - 94750 4.1 93 60 Tu 1 . - CDS 94897 - 95244 429 ## c0520 hypothetical protein - Prom 95273 - 95332 4.5 - Term 95312 - 95353 8.1 94 61 Op 1 31/0.000 - CDS 95373 - 96344 1050 ## COG0341 Preprotein translocase subunit SecF 95 61 Op 2 25/0.000 - CDS 96355 - 98169 2013 ## COG0342 Preprotein translocase subunit SecD 96 61 Op 3 15/0.000 - CDS 98230 - 98562 493 ## COG1862 Preprotein translocase subunit YajC 97 61 Op 4 17/0.000 - CDS 98585 - 99712 1073 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 98 61 Op 5 . - CDS 99768 - 100838 1087 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 100864 - 100923 4.0 + Prom 100807 - 100866 1.9 99 62 Tu 1 . + CDS 100931 - 101512 461 ## COG3124 Uncharacterized protein conserved in bacteria - Term 101351 - 101393 -1.0 100 63 Tu 1 . - CDS 101517 - 103331 1558 ## COG0366 Glycosidases 101 64 Op 1 5/0.190 - CDS 103490 - 104863 1538 ## COG1113 Gamma-aminobutyrate permease and related permeases - Term 104882 - 104917 6.4 102 64 Op 2 4/0.476 - CDS 104939 - 106258 1424 ## COG1114 Branched-chain amino acid permeases - Prom 106407 - 106466 5.3 - Term 106605 - 106638 3.1 103 65 Op 1 40/0.000 - CDS 106665 - 107960 1071 ## COG0642 Signal transduction histidine kinase - Term 107977 - 108016 3.3 104 65 Op 2 . - CDS 108018 - 108707 644 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 108731 - 108790 5.2 + Prom 108707 - 108766 3.8 105 66 Op 1 28/0.000 + CDS 108897 - 110099 805 ## COG0420 DNA repair exonuclease 106 66 Op 2 2/0.762 + CDS 110096 - 113239 2968 ## COG0419 ATPase involved in DNA repair 107 66 Op 3 . + CDS 113281 - 114549 958 ## COG2814 Arabinose efflux permease + Term 114648 - 114697 2.2 - Term 114634 - 114683 6.0 108 67 Tu 1 . - CDS 114692 - 115600 294 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase - Prom 115689 - 115748 4.3 + Prom 115635 - 115694 4.1 109 68 Tu 1 . + CDS 115725 - 116636 1172 ## COG2974 DNA recombination-dependent growth factor C 110 69 Tu 1 . - CDS 116714 - 117076 274 ## G2583_0501 hypothetical protein - Prom 117219 - 117278 8.7 - Term 117294 - 117330 3.0 111 70 Op 1 . - CDS 117337 - 117621 270 ## COG3123 Uncharacterized protein conserved in bacteria 112 70 Op 2 . - CDS 117693 - 118370 656 ## S0334 hypothetical protein - Prom 118529 - 118588 11.1 113 71 Op 1 . - CDS 118628 - 118819 218 ## LF82_2523 uncharacterized protein YaiA 114 71 Op 2 1/0.881 - CDS 118869 - 119393 399 ## COG0703 Shikimate kinase - Prom 119444 - 119503 5.2 - Term 119478 - 119515 -0.4 115 72 Tu 1 . - CDS 119576 - 120034 398 ## COG1671 Uncharacterized protein conserved in bacteria - Prom 120125 - 120184 3.5 + Prom 120053 - 120112 4.3 116 73 Tu 1 . + CDS 120154 - 120963 895 ## COG0345 Pyrroline-5-carboxylate reductase + Term 120972 - 121024 11.3 117 74 Tu 1 . - CDS 120980 - 122080 607 ## COG2199 FOG: GGDEF domain - Prom 122108 - 122167 4.8 - Term 122139 - 122180 10.2 118 75 Tu 1 . - CDS 122197 - 122517 268 ## APECO1_1624 hypothetical protein - Term 122588 - 122630 11.1 119 76 Op 1 . - CDS 122636 - 124051 1220 ## COG1785 Alkaline phosphatase - Prom 124091 - 124150 5.8 120 76 Op 2 . - CDS 124152 - 124412 258 ## SSON_0357 hypothetical protein - Prom 124596 - 124655 8.0 121 77 Tu 1 . + CDS 124875 - 125969 1157 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes + Term 125978 - 126015 5.1 - Term 125789 - 125834 1.8 122 78 Tu 1 . - CDS 125993 - 126205 347 ## UTI89_C0397 hypothetical protein - Prom 126285 - 126344 5.7 + Prom 126355 - 126414 3.8 123 79 Tu 1 . + CDS 126465 - 126773 309 ## APECO1_1629 hypothetical protein + Term 126778 - 126832 0.9 - Term 126765 - 126820 1.5 124 80 Op 1 . - CDS 126832 - 127926 963 ## SDY_0368 hypothetical protein 125 80 Op 2 . - CDS 127939 - 129159 1272 ## COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components 126 80 Op 3 . - CDS 129179 - 129373 98 ## ECIAI1_0372 hypothetical protein - Prom 129457 - 129516 3.4 + Prom 129376 - 129435 3.9 127 81 Tu 1 . + CDS 129511 - 130668 1028 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Term 130678 - 130726 10.6 128 82 Op 1 . - CDS 130669 - 131337 313 ## ECUMN_0411 putative DNA-binding transcriptional regulator 129 82 Op 2 . - CDS 131380 - 134268 2544 ## COG3468 Type V secretory pathway, adhesin AidA + Prom 134128 - 134187 2.6 130 83 Tu 1 . + CDS 134226 - 134417 76 ## 131 84 Tu 1 . + CDS 134792 - 135766 1007 ## COG0113 Delta-aminolevulinic acid dehydratase 132 85 Op 1 5/0.190 - CDS 135872 - 136723 889 ## COG2175 Probable taurine catabolism dioxygenase 133 85 Op 2 7/0.048 - CDS 136720 - 137547 998 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 134 85 Op 3 6/0.048 - CDS 137544 - 138311 271 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 135 85 Op 4 . - CDS 138324 - 139286 1113 ## COG4521 ABC-type taurine transport system, periplasmic component - Prom 139366 - 139425 4.1 136 86 Tu 1 . + CDS 139240 - 139464 111 ## EcE24377A_0388 hypothetical protein + Prom 139630 - 139689 7.9 137 87 Op 1 1/0.881 + CDS 139902 - 140573 385 ## COG2120 Uncharacterized proteins, LmbE homologs 138 87 Op 2 . + CDS 140583 - 141779 662 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 139 87 Op 3 . + CDS 141646 - 142338 328 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 140 87 Op 4 . + CDS 142340 - 143113 785 ## ECSE_0383 hypothetical protein + Term 143224 - 143282 19.7 + Prom 143217 - 143276 6.1 141 88 Op 1 2/0.762 + CDS 143298 - 143573 213 ## COG1937 Uncharacterized protein conserved in bacteria 142 88 Op 2 12/0.024 + CDS 143608 - 144717 1266 ## COG1062 Zn-dependent alcohol dehydrogenases, class III + Term 144733 - 144765 2.2 143 89 Tu 1 . + CDS 144810 - 145643 692 ## COG0627 Predicted esterase - Term 145709 - 145740 -1.0 144 90 Tu 1 . - CDS 145768 - 146307 579 ## COG3122 Uncharacterized protein conserved in bacteria - Prom 146335 - 146394 3.1 145 91 Tu 1 . - CDS 146409 - 147620 1022 ## COG0477 Permeases of the major facilitator superfamily - Prom 147672 - 147731 4.0 146 92 Op 1 6/0.048 - CDS 147796 - 148809 1208 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 147 92 Op 2 4/0.476 - CDS 148806 - 149756 981 ## COG4569 Acetaldehyde dehydrogenase (acetylating) 148 92 Op 3 1/0.881 - CDS 149753 - 150562 800 ## COG3971 2-keto-4-pentenoate hydratase 149 92 Op 4 . - CDS 150572 - 151438 955 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 150 92 Op 5 . - CDS 151456 - 152400 799 ## ECO111_0384 3-(2,3-dihydroxyphenyl)propionate dioxygenase 151 92 Op 6 . - CDS 152402 - 154066 1839 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Prom 154157 - 154216 5.8 + Prom 154105 - 154164 6.1 152 93 Op 1 . + CDS 154245 - 155090 750 ## COG1414 Transcriptional regulator 153 93 Op 2 1/0.881 + CDS 155158 - 156249 904 ## COG1609 Transcriptional regulators + Prom 156254 - 156313 4.4 154 94 Op 1 3/0.595 + CDS 156372 - 159446 2441 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 159454 - 159486 5.4 155 94 Op 2 . + CDS 159498 - 160751 1307 ## COG0477 Permeases of the major facilitator superfamily + Term 160760 - 160801 7.3 - Term 160744 - 160793 12.4 156 95 Op 1 3/0.595 - CDS 160830 - 161984 1040 ## COG2807 Cyanate permease 157 95 Op 2 4/0.476 - CDS 162017 - 162487 775 ## COG1513 Cyanate lyase 158 95 Op 3 . - CDS 162518 - 163177 543 ## COG0288 Carbonic anhydrase - Prom 163270 - 163329 4.5 + Prom 163202 - 163261 5.4 159 96 Tu 1 . + CDS 163287 - 164186 475 ## COG0583 Transcriptional regulator 160 97 Op 1 6/0.048 - CDS 164226 - 165509 1311 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 161 97 Op 2 2/0.762 - CDS 165499 - 166758 1431 ## COG1457 Purine-cytosine permease and related proteins - Prom 166796 - 166855 5.0 - Term 166910 - 166938 -1.0 162 98 Op 1 4/0.476 - CDS 166995 - 168881 1943 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 163 98 Op 2 8/0.048 - CDS 168921 - 170372 1571 ## COG2079 Uncharacterized protein involved in propionate catabolism 164 98 Op 3 9/0.048 - CDS 170406 - 171575 1181 ## COG0372 Citrate synthase 165 98 Op 4 . - CDS 171620 - 172510 1000 ## COG2513 PEP phosphonomutase and related enzymes - Prom 172540 - 172599 5.4 + Prom 172549 - 172608 5.0 166 99 Tu 1 . + CDS 172748 - 174334 1444 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain + Term 174337 - 174382 2.7 167 100 Tu 1 . - CDS 174432 - 174707 382 ## ECUMN_0373 hypothetical protein - Prom 174829 - 174888 4.2 168 101 Tu 1 . + CDS 174893 - 175525 492 ## COG1280 Putative threonine efflux protein + Term 175652 - 175685 -0.4 - TRNA 175777 - 175857 28.4 # Pseudo ??? 0 0 169 102 Tu 1 . - CDS 176199 - 177014 337 ## ECO111_0365 hypothetical protein - Prom 177041 - 177100 5.5 170 103 Tu 1 . - CDS 177257 - 177616 320 ## COG1064 Zn-dependent alcohol dehydrogenases Predicted protein(s) >gi|299857056|gb|ADWS01000008.1| GENE 1 2 - 518 350 172 aa, chain - ## HITS:1 COG:rhsD KEGG:ns NR:ns ## COG: rhsD COG3209 # Protein_GI_number: 16128481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 172 1 172 1426 345 97.0 3e-95 MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGMTSGNPVNPLLGAKVQPG ETDLALPDPLPFILSRTYSSYRTKTPAPVGIFGPGWKAPSDIRLQLRDDGLILNDNGGRS IHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWASLPPDIRLSPHL >gi|299857056|gb|ADWS01000008.1| GENE 2 948 - 3362 2341 804 aa, chain - ## HITS:1 COG:ybbP KEGG:ns NR:ns ## COG: ybbP COG3127 # Protein_GI_number: 16128480 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component # Organism: Escherichia coli K12 # 1 804 1 804 804 1424 99.0 0 MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLSQQSREFMAGDRALRSS REVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAVDDIYPMYGDLQTNPPGLK PQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQEPDSGVNPFQMAPRLMMNLAD VDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLKPEQRWYGLEQDEGALGRSMERS QQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAILKTLGAGRAQLRKQIVGQWLMVLA LSAVTGGAIGLLFENVLMVLLKPVLPAALPPASLWPWLWALGTMTVISLLVGLRPYRLLL ATQPLRVLRNDVVANVWPLKFYLPIVSVVVVLLLAGLMGGSMLLWAVLAGAVVLALLCGV LGWMLLNVLRRMTLKSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDR WQQQLPPESPNYFLINIATEQVEPLKAFLAEHQIVPESFYPVVRARLTAINDKPTEGNED EALNRELNLTWQNTRPDHNPIVAGNWPPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEF RAKVTSLRKVDWESLRPNFYFIFPEGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISL LDIGAILKQVGQVLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAG KKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALL LSLFGGWLGARLVKGKALFRQFAG >gi|299857056|gb|ADWS01000008.1| GENE 3 3359 - 4045 313 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 25 228 20 223 223 125 36 2e-27 MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLD DGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESS AESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQ TGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLRLVNGQLQEEA >gi|299857056|gb|ADWS01000008.1| GENE 4 3983 - 4639 542 218 aa, chain + ## HITS:1 COG:tesA KEGG:ns NR:ns ## COG: tesA COG2755 # Protein_GI_number: 16128478 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Escherichia coli K12 # 11 218 1 208 208 404 100.0 1e-113 MLPLTDGLLKMMNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSASAAWP ALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQT EQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEV YLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS >gi|299857056|gb|ADWS01000008.1| GENE 5 4629 - 5438 226 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 14 268 3 249 259 91 32 2e-17 MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNNMGF TGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGPLSTISRAQMEQQFSANFF GAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHS GIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVDKVRHAFISEKPKM RYPVTLVTWAVMVLKRLLPGRVMDKILQG >gi|299857056|gb|ADWS01000008.1| GENE 6 5499 - 6353 1304 284 aa, chain + ## HITS:1 COG:ECs0555 KEGG:ns NR:ns ## COG: ECs0555 COG3118 # Protein_GI_number: 15829809 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Escherichia coli O157:H7 # 1 284 13 296 296 483 100.0 1e-136 MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAK LDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQ AMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQD TRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF GHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY >gi|299857056|gb|ADWS01000008.1| GENE 7 6416 - 7195 756 259 aa, chain - ## HITS:1 COG:ECs0554 KEGG:ns NR:ns ## COG: ECs0554 COG0390 # Protein_GI_number: 15829808 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 259 10 268 268 443 99.0 1e-124 MNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAIIQLIIVGYVLKYIFSV DDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVGAGITLAVLILSGSIEFIP MQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKLSLGATPKQASAILIRDSIRA ALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLT YRKFYNSRHQLVVTQLKKK >gi|299857056|gb|ADWS01000008.1| GENE 8 7182 - 7859 174 225 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 7 208 1 210 245 71 30 2e-11 MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLISPT SGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDF LERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEMI HRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYELA >gi|299857056|gb|ADWS01000008.1| GENE 9 8005 - 8922 1350 305 aa, chain + ## HITS:1 COG:ECs0552 KEGG:ns NR:ns ## COG: ECs0552 COG0330 # Protein_GI_number: 15829806 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 536 100.0 1e-152 MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKIN MMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVL GSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAER TKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVS EAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSAN KRTQP >gi|299857056|gb|ADWS01000008.1| GENE 10 8919 - 9377 394 152 aa, chain + ## HITS:1 COG:ybbJ KEGG:ns NR:ns ## COG: ybbJ COG1585 # Protein_GI_number: 16128472 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Escherichia coli K12 # 2 152 1 151 151 241 99.0 5e-64 MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVSAVITGLVVWLVPLGWEWQGVMF AILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSS WPVSASEDLGAGTHVEVIAIEGITLHIRAVSS >gi|299857056|gb|ADWS01000008.1| GENE 11 9378 - 9785 393 135 aa, chain - ## HITS:1 COG:ybbI KEGG:ns NR:ns ## COG: ybbI COG0789 # Protein_GI_number: 16128471 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 135 1 135 135 266 100.0 8e-72 MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNL EESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDSADC PIIENLSGCCHHRAG >gi|299857056|gb|ADWS01000008.1| GENE 12 9910 - 11199 1412 429 aa, chain - ## HITS:1 COG:ybaT KEGG:ns NR:ns ## COG: ybaT COG0531 # Protein_GI_number: 16128470 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 429 2 430 430 668 100.0 0 MNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSG YAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQFL HEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQP AHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLLY ISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVF NIMDNMGSERELPKLMNKSLWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYL AVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLWSQGSRALIWIIGSLLLSLIVA MVMKRNKTV >gi|299857056|gb|ADWS01000008.1| GENE 13 11205 - 12137 916 310 aa, chain - ## HITS:1 COG:ybaS KEGG:ns NR:ns ## COG: ybaS COG2066 # Protein_GI_number: 16128469 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Escherichia coli K12 # 1 310 1 310 310 605 98.0 1e-173 MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAAVAIVTCDGNIYRAGDSDY RFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVIALELHGGKPLSPLVNAGA IATTSLINAENIEQRWQRILHIQQQLAGEQVALSDEVNQSEQTTNFHNRAIAWLLYSAGY LYCDAMEACDVYTRQCSTLINTVELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMM EGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGIAAFSPPLDEEGNSVRGQKMVASVA KQLGYNVFKG >gi|299857056|gb|ADWS01000008.1| GENE 14 12399 - 14903 2687 834 aa, chain + ## HITS:1 COG:ybaR KEGG:ns NR:ns ## COG: ybaR COG2217 # Protein_GI_number: 16128468 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli K12 # 1 834 1 834 834 1468 99.0 0 MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVTGTASAEQLIETIKQAG YDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLSGMSCASCVTRVQNA LQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAVA TMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSLWLVIGLITLAVMVFAGGHFYRS AWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGH MLEARARQRSSKALEKLLDLTPPTARLVTDEGEKSVPLAEVQPGMLLRLTTGDRVPVDGE ITQGEAWLDEAMLTGEPIPQQKGEGESVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVR QAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACP CALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTVVFDKTGTLTEGKPQVVAVKT FTDVDEAQALRLAAALEQGSSHPLARAILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHAL LLGNQALLNEQQVGTKAIEAEITAQASQGATPVLLAIDGKAVALLAVRDPLRSDSVAALQ RLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGD GINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG AFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE >gi|299857056|gb|ADWS01000008.1| GENE 15 15017 - 15412 350 131 aa, chain - ## HITS:1 COG:ECs0536 KEGG:ns NR:ns ## COG: ECs0536 COG3093 # Protein_GI_number: 15829790 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 225 98.0 2e-59 MIQYVLASLFTGKQQLKTMKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVS ALINNNRKLTTEMAFRLAKVFDTTVDFRLNLQAAVDLWEVENNMRTQEELGRIETVAEYL ARREERAKKVA >gi|299857056|gb|ADWS01000008.1| GENE 16 15496 - 16290 756 264 aa, chain + ## HITS:1 COG:ybaP KEGG:ns NR:ns ## COG: ybaP COG3735 # Protein_GI_number: 16128466 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 264 1 264 264 503 99.0 1e-142 MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGSHDMAPLPTRLLKKLKN ADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHISQEMGISPSLFSTQPLWQI AMVLQATQAQKLGLRAEYGIDYQLLQTAKQQHKPVIELEGAENQIAMLLQLPDKGLALLD DTLTHWHTNARLLQQMMSWWLNAPPQNNEITLPNTFSQSLYDVLMHQRNLAWRDKLRAMP PGRYVVAVGALHLYGEGNLPQMLR >gi|299857056|gb|ADWS01000008.1| GENE 17 16494 - 16973 720 159 aa, chain + ## HITS:1 COG:ybaK KEGG:ns NR:ns ## COG: ybaK COG2606 # Protein_GI_number: 16128465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 159 1 159 159 292 100.0 2e-79 MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLVAVNGDMKHLA VAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGGISPLGQKKRLPTIIDAPA QEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD >gi|299857056|gb|ADWS01000008.1| GENE 18 17010 - 18662 1809 550 aa, chain - ## HITS:1 COG:ushA KEGG:ns NR:ns ## COG: ushA COG0737 # Protein_GI_number: 16128464 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Escherichia coli K12 # 1 550 1 550 550 1108 99.0 0 MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHGHFWRNEYGEYGLAAQK TLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFD NPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN PEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARAL PAGSLAMIVGGHSQAPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADF EFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQL EVKIGEVNDRLEGDRSKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISY KNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKI KGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSV YEPKGEVSWQ >gi|299857056|gb|ADWS01000008.1| GENE 19 18880 - 20100 1165 406 aa, chain + ## HITS:1 COG:fsr KEGG:ns NR:ns ## COG: fsr COG0477 # Protein_GI_number: 16128463 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 406 1 406 406 676 100.0 0 MAMSEQPQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLILAIYPLLQSEFSLTFM QIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLSGLVLLALAGSFGAVLLAA ALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFGSSLGPLLAAVIIAPYGKGNV AWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIINPLPRNKVVLAVSILLILIFSKY FYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGRKYVIWGSI LGVAPFTLILPYASLHWTGVLTVIIGFILASAFSAILVYAQELLPGRIGMVSGLFFGFAF GMGGLGAAVLGLIADHTSIELVYKICAFLPLLGMLTIFLPDNRHKD >gi|299857056|gb|ADWS01000008.1| GENE 20 20338 - 22014 500 558 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 4 543 5 535 618 197 25 3e-49 MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPEL AELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLLGMALSAVLGWSLMTGIVF GLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLPAVAGMMEQGDV GFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARSAATGSRELFTLSVLALALGIAF GAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPLILIQ QPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTALTIAASLAQIGEFAFILAGLGMALNL LPQAGQNLVLAGAILSIMLNPVLFALLEKYLAKTETLEEQTLEEAIEEEKQIPVDICNHA LLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLE CAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQVVMGEREIA RTMLELLETPPAGEVVTG >gi|299857056|gb|ADWS01000008.1| GENE 21 22147 - 23451 1360 434 aa, chain - ## HITS:1 COG:ECs0530 KEGG:ns NR:ns ## COG: ECs0530 COG0524 # Protein_GI_number: 15829784 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 434 1 434 434 914 100.0 0 MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLVDIEAKVDDEFIERYGL SAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNI EIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIP EDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKKYNVPVVLTLGTKFVIAENPQWW QQFLKDHVSILAMNEDEAEALTGESDPLLASDKALDWVDLVLCTAGPIGLYMAGFTEDEA KRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPLRVYSHIAPYMGGPEKIMNTNGAGDGA LAALLHDITANSYHRSNVPNSSKHKFTWLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGL PEREDSLEESYWDR >gi|299857056|gb|ADWS01000008.1| GENE 22 23603 - 24562 718 319 aa, chain + ## HITS:1 COG:aes KEGG:ns NR:ns ## COG: aes COG0657 # Protein_GI_number: 16128460 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Escherichia coli K12 # 1 319 1 319 319 656 98.0 0 MKPENKLPVLDLISAEMKTVVNTLQSDLPSWPATGTIAEQRQYYTLERRFWNAGAPEMAT RAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDTHDRIMRLLASYSQCTVIG IDYPLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIGFAGDSAGAMLALASALWLRD KQIDCGKIAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYY CLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRM MKTADEALRDGAQFFTAQL >gi|299857056|gb|ADWS01000008.1| GENE 23 24559 - 25521 897 320 aa, chain - ## HITS:1 COG:ECs0528 KEGG:ns NR:ns ## COG: ECs0528 COG0276 # Protein_GI_number: 15829782 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 622 99.0 1e-178 MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPR VAKLYASVWMEDGSPLMVYSRQQQQALAQRLPDTPVALGMSYGSPSLESAVDELLAEHVD HIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASF AKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMAPEKVMMTFQSRFGRE PWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIP ALNATPEHIEMMANLVAAYR >gi|299857056|gb|ADWS01000008.1| GENE 24 25757 - 26401 967 214 aa, chain - ## HITS:1 COG:ECs0527 KEGG:ns NR:ns ## COG: ECs0527 COG0563 # Protein_GI_number: 15829781 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Escherichia coli O157:H7 # 1 214 1 214 214 404 100.0 1e-113 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVT DELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRI VGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIG YYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG >gi|299857056|gb|ADWS01000008.1| GENE 25 26582 - 28456 2685 624 aa, chain - ## HITS:1 COG:ECs0526 KEGG:ns NR:ns ## COG: ECs0526 COG0326 # Protein_GI_number: 15829780 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Escherichia coli O157:H7 # 1 624 1 624 624 1181 99.0 0 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGD GELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLI GQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITLHL REGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDGETVISWEKINKAQALWTRNKSE ITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLY VQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQML EKLAKDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTYTDSSAQTVSLEDYV SRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPF QSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVS TDADEMSTQMAKLFAAAGQKVPEVKYIFELNPDHVLVKRAADTEDEAKFSEWVELLLDQA LLAERGTLEDPNLFIRRMNQLLVS >gi|299857056|gb|ADWS01000008.1| GENE 26 28566 - 29171 525 201 aa, chain - ## HITS:1 COG:ECs0525 KEGG:ns NR:ns ## COG: ECs0525 COG0353 # Protein_GI_number: 15829779 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 399 100.0 1e-111 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE LEMVDGTTLSHSLAGRHKIRF >gi|299857056|gb|ADWS01000008.1| GENE 27 29171 - 29500 227 109 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 5 109 9 114 114 92 41 2e-17 MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRVEIDPS LLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLPPGFKMPF >gi|299857056|gb|ADWS01000008.1| GENE 28 29553 - 31484 1886 643 aa, chain - ## HITS:1 COG:ECs0523 KEGG:ns NR:ns ## COG: ECs0523 COG2812 # Protein_GI_number: 15829777 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Escherichia coli O157:H7 # 1 643 1 643 643 1114 99.0 0 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDAWAAQVSQLSLPKLVEQVA LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSTLKGSTVELTIVEDDNPAVRTPL EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI >gi|299857056|gb|ADWS01000008.1| GENE 29 31613 - 32164 824 183 aa, chain - ## HITS:1 COG:apt KEGG:ns NR:ns ## COG: apt COG0503 # Protein_GI_number: 16128453 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Escherichia coli K12 # 1 183 1 183 183 349 100.0 1e-96 MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKV VGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGD KVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPF PGH >gi|299857056|gb|ADWS01000008.1| GENE 30 32317 - 32694 324 125 aa, chain - ## HITS:1 COG:ECs0521 KEGG:ns NR:ns ## COG: ECs0521 COG2832 # Protein_GI_number: 15829775 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 125 1 125 125 199 100.0 1e-51 MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSPRFHAWLLYRSWFGSYL RFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLLVILACLLFYMWRIPVIDE KQEKH >gi|299857056|gb|ADWS01000008.1| GENE 31 32764 - 33291 507 175 aa, chain + ## HITS:1 COG:priC KEGG:ns NR:ns ## COG: priC COG3923 # Protein_GI_number: 16128451 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N'' # Organism: Escherichia coli K12 # 1 175 1 175 175 244 99.0 8e-65 MKTALLLEKLEGQLATLRQRCAPVAQFATLSARFDRHLFQTRATTLQACLDEAGDNLAAL RHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAPPKIARWQRKRIQHQDFER RLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCRHALEKIENRLARLTR >gi|299857056|gb|ADWS01000008.1| GENE 32 33305 - 33466 199 53 aa, chain + ## HITS:1 COG:no KEGG:ECS88_0463 NR:ns ## KEGG: ECS88_0463 # Name: ybaM # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 53 1 53 53 72 100.0 4e-12 MSLENAPDDVKLAVDLIVLLEENQIPARTVLRALDIVKRDYEKKLTRDDEAEK >gi|299857056|gb|ADWS01000008.1| GENE 33 33678 - 37040 3671 1120 aa, chain - ## HITS:1 COG:ECs0518 KEGG:ns NR:ns ## COG: ECs0518 COG3264 # Protein_GI_number: 15829772 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 1120 1 1120 1120 2079 99.0 0 MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTKADLQAQLDSLNKQKDL SAQDKLVQQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKMRQATAALTALSDIDNDEE TRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVSLQTQPERVQNAMYNASQQLQ QIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQRKSLEGNTVLQDTLQKQRDYVT ANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPDEAARIQANPLVKQELEINQQLSQR LITATENGNQLMQQNIKVKNWLERALQSERNIKEQIAVLKGSLLLSRILYQQQQTLPSAD ELENMTNRIADLRLEQFEVNQQRDALFQSDAFVNKLEEGHTNEVNSEVHDALLQVVDMRR ELLDQLNKQLGNQLMMAINLQINQQQLMSVSKNLKSILTQQIFWVNSNRPMDWDWIKAFP QSLKDEFKSMKITVNWEKAWPAVFIAFLAGLPLLLIAGLIHWRLGWLKAYQQKLASAVGS LRNDSQLNTPKAILIDLIRALPVCLIILAVGLILLTMQLNISELLWSFSKKLAIFWLVFG LCWKVLEKNGVAVRHFGMPEQQTSHWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLG QAMIFFNLLLIAFLVWPMCRESWRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLR LSGRWIETVYLVIIWNLLYQTVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPT IALEQVNQQTLRITMLLMFALFGVMFWAIWSDLITVFSYLDSITLWHYNGTEAGAAVVKN VTMGSLLFAIIASMVAWALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMT VFGSLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGT VSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRK VLLKAATEHPRVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCR ENDINIAFNQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG >gi|299857056|gb|ADWS01000008.1| GENE 34 37046 - 37237 69 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300919868|ref|ZP_07136335.1| ## NR: gi|300919868|ref|ZP_07136335.1| conserved domain protein [Escherichia coli MS 115-1] # 1 61 1 61 71 103 98.0 4e-21 MKVSEPEERPEKVKPQEYHDAVNQNSNDENVQEKSWSQIQGYSLVAGLRSVGHRRYISSK MAT >gi|299857056|gb|ADWS01000008.1| GENE 35 37168 - 37815 492 215 aa, chain - ## HITS:1 COG:acrR KEGG:ns NR:ns ## COG: acrR COG1309 # Protein_GI_number: 16128448 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 215 1 215 215 418 100.0 1e-117 MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFS EIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVTEERRRLLMEIIFHKCEFV GEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMTRRAAIIMRGYISGLMENWLF APQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE >gi|299857056|gb|ADWS01000008.1| GENE 36 37957 - 39150 1218 397 aa, chain + ## HITS:1 COG:ECs0516 KEGG:ns NR:ns ## COG: ECs0516 COG0845 # Protein_GI_number: 15829770 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 397 1 397 397 660 100.0 0 MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRT SAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAAN IAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPI SGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENG KAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEG LNPNAILVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVV ISGLQKVRPGVQVKAQEVTADNNQQAASGAQPEQSKS >gi|299857056|gb|ADWS01000008.1| GENE 37 39173 - 42322 3310 1049 aa, chain + ## HITS:1 COG:acrB KEGG:ns NR:ns ## COG: acrB COG0841 # Protein_GI_number: 16128446 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1049 1 1049 1049 2000 100.0 0 MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDT VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGS QYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANAL DTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL SVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGR YLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLT KEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKD AMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNG LEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYR MLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEA MELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFS VMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGL IEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIF FVPVFFVVVRRRFSRKNEDIEHSHTVDHH >gi|299857056|gb|ADWS01000008.1| GENE 38 42868 - 43242 254 124 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_0417 NR:ns ## KEGG: ECDH10B_0417 # Name: ybaJ # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 124 1 124 124 243 100.0 2e-63 MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAINLQLNELIEHIATFAL NYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRKSGNRLFRCFVNATKENPA SLSC >gi|299857056|gb|ADWS01000008.1| GENE 39 43268 - 43486 184 72 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C0487 NR:ns ## KEGG: UTI89_C0487 # Name: hha # Def: hemolysin expression-modulating protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 72 5 76 76 130 100.0 1e-29 MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLY DKIPSSVWKFIR >gi|299857056|gb|ADWS01000008.1| GENE 40 43658 - 44209 395 183 aa, chain + ## HITS:1 COG:ylaD KEGG:ns NR:ns ## COG: ylaD COG0110 # Protein_GI_number: 16128443 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 1 183 1 183 183 381 100.0 1e-106 MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEA YIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVAR NSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARII KKL >gi|299857056|gb|ADWS01000008.1| GENE 41 44325 - 44795 429 156 aa, chain + ## HITS:1 COG:no KEGG:G2583_0570 NR:ns ## KEGG: G2583_0570 # Name: ylaC # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 156 14 169 169 304 100.0 8e-82 MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYVAFFATLAVMLQSETLS GSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGEWYNTRFVPAALVEAILNS PRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS >gi|299857056|gb|ADWS01000008.1| GENE 42 44953 - 46509 1204 518 aa, chain + ## HITS:1 COG:ECs0510 KEGG:ns NR:ns ## COG: ECs0510 COG4943 # Protein_GI_number: 15829764 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Escherichia coli O157:H7 # 1 518 1 518 518 1040 99.0 0 MLVRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQ GKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFP EPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKG WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI SINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHE IYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIE TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL >gi|299857056|gb|ADWS01000008.1| GENE 43 46551 - 46904 473 117 aa, chain - ## HITS:1 COG:ECs0509 KEGG:ns NR:ns ## COG: ECs0509 COG5507 # Protein_GI_number: 15829763 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 117 1 117 117 210 99.0 4e-55 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA EENEEVVFSWIEYPSKEVRDAATQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE >gi|299857056|gb|ADWS01000008.1| GENE 44 47283 - 47594 267 103 aa, chain + ## HITS:1 COG:ECs0508 KEGG:ns NR:ns ## COG: ECs0508 COG3695 # Protein_GI_number: 15829762 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Escherichia coli O157:H7 # 1 103 27 129 129 202 100.0 8e-53 MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRV VNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWNY >gi|299857056|gb|ADWS01000008.1| GENE 45 47625 - 48197 428 190 aa, chain - ## HITS:1 COG:ECs0507 KEGG:ns NR:ns ## COG: ECs0507 COG3126 # Protein_GI_number: 15829761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 233 98.0 2e-61 MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKV ALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFVLPFNPADVQPNARILLSA AITVNDKVVFITDTVQPVINKGGTKADLTLVPVQQTAVPVQASGGATTTVPSTSPTQVNP SSAVPAPTQY >gi|299857056|gb|ADWS01000008.1| GENE 46 48415 - 49275 682 286 aa, chain + ## HITS:1 COG:ECs0506 KEGG:ns NR:ns ## COG: ECs0506 COG1946 # Protein_GI_number: 15829760 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 557 100.0 1e-159 MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKETVPEERLVHSF HSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIFYMTASFQAPEAGFEHQKT MPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEVRPVEFHNPLKGHVAEPHRQV WIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIGFLEPGIQIATIDHSMWFHRPFN LNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNHN >gi|299857056|gb|ADWS01000008.1| GENE 47 49323 - 50609 1511 428 aa, chain - ## HITS:1 COG:ECs0505 KEGG:ns NR:ns ## COG: ECs0505 COG0004 # Protein_GI_number: 15829759 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 727 100.0 0 MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRG KNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNNFFGNINWLMLKNIELTAVMGSIYQY IHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWGGGLLASHGA LDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAG SAGTANEIAALAFVNTVVATAAAILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGY IGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASSLG GVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGLDVNS HGENAYNA >gi|299857056|gb|ADWS01000008.1| GENE 48 50639 - 50977 484 112 aa, chain - ## HITS:1 COG:ECs0504 KEGG:ns NR:ns ## COG: ECs0504 COG0347 # Protein_GI_number: 15829758 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 196 100.0 1e-50 MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVK IDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL >gi|299857056|gb|ADWS01000008.1| GENE 49 51158 - 52939 225 593 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 346 565 135 355 398 91 35 3e-17 MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVAKNNLP LKMVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQP VGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRMALVAIMIFPVVLV VMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERMGEASRSHYMA RMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIE LTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDRPLQSGTIEVDNVSFAYRDDNLVLKNI NLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSALRQGVAMV QQDPVVLADTFLANVTLGRDISEERVWQALETVQLAELARSMSDGIYTPLGEQGNNLSVG QKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALAAVREHTTLVVIAHRLSTIVD ADTILVLHRGQAVEQGTHQQLLAAQGRYWQMYQLQLAGEELAASVREEESLSA >gi|299857056|gb|ADWS01000008.1| GENE 50 52932 - 54704 205 590 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 342 557 137 351 398 83 28 6e-15 MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVDGVTEQHFTTGQILMWI ATMVLIAVVVYFLRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLMARA TNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQLTLFALLPMPVMAIMIKRNGD ALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARI DARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFMMYLGLMIWPMLALAWMFNI VERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNFALK PGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF LFSDTVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQR ISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEI IVMQHGHIAQRGNHDELAQQSGWYRDMYRYQQLEAALDDAPEIREEAVDA >gi|299857056|gb|ADWS01000008.1| GENE 51 54734 - 55192 365 152 aa, chain - ## HITS:1 COG:ybaO KEGG:ns NR:ns ## COG: ybaO COG1522 # Protein_GI_number: 16128432 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 152 30 181 181 308 100.0 2e-84 MLDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKI GLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEF YKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE >gi|299857056|gb|ADWS01000008.1| GENE 52 55345 - 56163 658 272 aa, chain - ## HITS:1 COG:cof KEGG:ns NR:ns ## COG: cof COG0561 # Protein_GI_number: 16128431 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 272 5 276 276 557 99.0 1e-159 MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDA YLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALL QAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCL EVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLGSVGSGFIMGNAMPQLRAEL PHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE >gi|299857056|gb|ADWS01000008.1| GENE 53 56263 - 57963 918 566 aa, chain + ## HITS:1 COG:ECs0499 KEGG:ns NR:ns ## COG: ECs0499 COG4533 # Protein_GI_number: 15829753 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 566 1 566 566 1103 99.0 0 MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSG RGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDT PTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSTDGL RWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHR PDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYW ITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARK VISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPDEVKLPKTLTLVYHLPIELHT MAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKAVFSQLMADATLTPLFNYHYRISAP PGVNGVRLTPRGWFEFTEAWLPAPSQ >gi|299857056|gb|ADWS01000008.1| GENE 54 58028 - 58723 691 231 aa, chain + ## HITS:1 COG:ybaX KEGG:ns NR:ns ## COG: ybaX COG0603 # Protein_GI_number: 16128429 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Escherichia coli K12 # 1 231 1 231 231 483 99.0 1e-136 MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARAHKV LDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQVKAEAVI TGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALADYYGKLDL VRNETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKPTVMAAMKQKTGLR >gi|299857056|gb|ADWS01000008.1| GENE 55 58775 - 59173 375 132 aa, chain - ## HITS:1 COG:ybaW KEGG:ns NR:ns ## COG: ybaW COG0824 # Protein_GI_number: 16128428 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Escherichia coli K12 # 1 132 1 132 132 251 100.0 3e-67 MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWMTAHNIAFVVVNININY RRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADALITFVCIDLKTQKALALE GELREKLEQMVK >gi|299857056|gb|ADWS01000008.1| GENE 56 59267 - 59638 539 123 aa, chain - ## HITS:1 COG:ybaV KEGG:ns NR:ns ## COG: ybaV COG1555 # Protein_GI_number: 16128427 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Escherichia coli K12 # 1 123 1 123 123 180 99.0 5e-46 MKHGIKALLITLSLACAGMSHSALAAASVAKPTTVETKAEAPAAQSKAAVPAKASDEEGT RVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVEDLKQVPGMGNSLVERNLAV LTL >gi|299857056|gb|ADWS01000008.1| GENE 57 59789 - 61660 2356 623 aa, chain - ## HITS:1 COG:ybaU KEGG:ns NR:ns ## COG: ybaU COG0760 # Protein_GI_number: 16128426 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli K12 # 1 623 1 623 623 1106 100.0 0 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAKVNDQEISRGQFENAFN SERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQA IFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGET DELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLDA ATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAK EKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAK VKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQAAGVKATQTGWFS KDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIITVDGDRAFVLRISEHKPEAVKPLA DVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPI SQAAFALPLPAKDKPSYGMATDMQGNVVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIV FEALMSNLRKEAKIKIGDALEQQ >gi|299857056|gb|ADWS01000008.1| GENE 58 61852 - 62124 438 90 aa, chain - ## HITS:1 COG:YPO3154 KEGG:ns NR:ns ## COG: YPO3154 COG0776 # Protein_GI_number: 16123316 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 90 1 90 90 126 92.0 1e-29 MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG RNPQTGKEITIAAAKVPSFRAGKALKDAVN >gi|299857056|gb|ADWS01000008.1| GENE 59 62333 - 64687 3103 784 aa, chain - ## HITS:1 COG:lon KEGG:ns NR:ns ## COG: lon COG0466 # Protein_GI_number: 16128424 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Escherichia coli K12 # 1 784 1 784 784 1482 100.0 0 MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEAST DEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYLESP TIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLADTIAAHMPLKLADK QSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE LGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQ VPWNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGV GKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLF LLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAG VRGLEREISKLCRKAVKQLLLDKSLKHIEINGDNLHDYLGVQRFDYGRADNENRVGQVTG LAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYE KRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK EKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQV VTAK >gi|299857056|gb|ADWS01000008.1| GENE 60 64875 - 66149 238 424 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 159 386 250 432 466 96 31 8e-19 MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRE RSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGP TGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGI VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDT SKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGL IPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAK KAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQQ ASGE >gi|299857056|gb|ADWS01000008.1| GENE 61 66275 - 66898 638 207 aa, chain - ## HITS:1 COG:ECs0491 KEGG:ns NR:ns ## COG: ECs0491 COG0740 # Protein_GI_number: 15829745 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 417 100.0 1e-117 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER DTERDRFLSAPEAVEYGLVDSILTHRN >gi|299857056|gb|ADWS01000008.1| GENE 62 66837 - 67076 79 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300820318|ref|ZP_07100470.1| ## NR: gi|300820318|ref|ZP_07100470.1| hypothetical protein HMPREF9346_00112 [Escherichia coli MS 119-7] # 28 79 1 52 52 104 98.0 2e-21 MTIGTSAIWGAKLSRSPLYDISVSWIKLKKPAVPIVTLWTDYQLVPVLWVRHHHISSITI FCCYANTERGFSHGSMQNS >gi|299857056|gb|ADWS01000008.1| GENE 63 67144 - 68442 1911 432 aa, chain - ## HITS:1 COG:ECs0490 KEGG:ns NR:ns ## COG: ECs0490 COG0544 # Protein_GI_number: 15829744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 738 100.0 0 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA SVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGL EAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGG KASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKV EERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDI DVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNEL KADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEK ETTFNELMNQQA >gi|299857056|gb|ADWS01000008.1| GENE 64 68786 - 69103 312 105 aa, chain - ## HITS:1 COG:ECs0489 KEGG:ns NR:ns ## COG: ECs0489 COG0271 # Protein_GI_number: 15829743 # Func_class: T Signal transduction mechanisms # Function: Stress-induced morphogen (activity unknown) # Organism: Escherichia coli O157:H7 # 1 105 12 116 116 204 100.0 3e-53 MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMI YSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAGSIA >gi|299857056|gb|ADWS01000008.1| GENE 65 69408 - 69986 722 192 aa, chain + ## HITS:1 COG:yajG KEGG:ns NR:ns ## COG: yajG COG3056 # Protein_GI_number: 16128419 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Escherichia coli K12 # 1 192 35 226 226 355 100.0 2e-98 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAK VTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVNLQIIVSQLYADVSQGNVR YNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNKNIADAVNSVLTDTIADMSQD TSIHEFIKQNAR >gi|299857056|gb|ADWS01000008.1| GENE 66 70030 - 71505 1316 491 aa, chain + ## HITS:1 COG:ECs0487 KEGG:ns NR:ns ## COG: ECs0487 COG0477 # Protein_GI_number: 15829741 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 491 1 491 491 843 99.0 0 MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYV FKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLEPGTQLRWMAALAVVIAFC SASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWLM AALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAF AMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQG ASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGTSAFVALLMTLCNKSFSATQFALLSAL SAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAAVPGLILLLVCRQTLEYTRVNDNFISRTE YPAGYAFAMWTLAAGVSLLAVWLLLLTMDALDLTHFSFLPALLEVGVLVALSGVVLGGLL DYLALRKTHLT >gi|299857056|gb|ADWS01000008.1| GENE 67 71967 - 72914 930 315 aa, chain + ## HITS:1 COG:cyoA KEGG:ns NR:ns ## COG: cyoA COG1622 # Protein_GI_number: 16128417 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Escherichia coli K12 # 1 315 1 315 315 625 99.0 1e-179 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAEFDQWVAKAKQ SPNSMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH EGMEGMDMSHAESAH >gi|299857056|gb|ADWS01000008.1| GENE 68 72936 - 74927 2029 663 aa, chain + ## HITS:1 COG:ECs0485 KEGG:ns NR:ns ## COG: ECs0485 COG0843 # Protein_GI_number: 15829739 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Escherichia coli O157:H7 # 1 663 1 663 663 1241 100.0 0 MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYLWKEWLTSVDHKRLGIM YIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVI GLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIE YSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII ASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSE IAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTG VKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHF HNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMT RRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLE WATSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFST IFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLK NGN >gi|299857056|gb|ADWS01000008.1| GENE 69 74917 - 75531 647 204 aa, chain + ## HITS:1 COG:cyoC KEGG:ns NR:ns ## COG: cyoC COG1845 # Protein_GI_number: 16128415 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Escherichia coli K12 # 1 204 1 204 204 363 99.0 1e-101 MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTG KDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWLALTWLFGAGFIGMEIYEF HHLIVNGMGPDHSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL SLFWHFLDVVWICVFTVVYLMGAM >gi|299857056|gb|ADWS01000008.1| GENE 70 75531 - 75860 318 109 aa, chain + ## HITS:1 COG:ECs0483 KEGG:ns NR:ns ## COG: ECs0483 COG3125 # Protein_GI_number: 15829737 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 4 # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 159 100.0 8e-40 MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPAVILGTILAMAVVQVLV HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMMMH >gi|299857056|gb|ADWS01000008.1| GENE 71 75875 - 76762 895 295 aa, chain + ## HITS:1 COG:ECs0482 KEGG:ns NR:ns ## COG: ECs0482 COG0109 # Protein_GI_number: 15829736 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Escherichia coli O157:H7 # 1 295 2 296 296 524 100.0 1e-148 MFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVGVSLVVASGCVFNNYID RDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVYV GVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDSGAAILLAIFSLWQMPHSYAIA IFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAVS VWWLGMALRGYKVADDRIWARKLFGFSIIAITALSVMMSVDFMVPDSHTLLAAVW >gi|299857056|gb|ADWS01000008.1| GENE 72 76947 - 77258 238 103 aa, chain + ## HITS:1 COG:no KEGG:ECB_00378 NR:ns ## KEGG: ECB_00378 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 103 23 125 125 167 100.0 9e-41 MPGKTATLPDVDKTLKNARVELKTSPDAKNKLREAAQAVGVDLSAFILSAAMERAESVLD NQRRRELSNQSWELMNQLIAEPAQPTLALKALMKRKNSDGRQA >gi|299857056|gb|ADWS01000008.1| GENE 73 77242 - 77784 310 180 aa, chain + ## HITS:1 COG:no KEGG:SSON_0409 NR:ns ## KEGG: SSON_0409 # Name: not_defined # Def: putative acetyltransferase # Organism: S.sonnei # Pathway: not_defined # 1 180 1 180 180 368 100.0 1e-101 MVDKHEEITLPIVLSCNYQSDITYPGQKQFDCGNPVIDKFVRASLKKSVRNSDCAAKALI DRQSGELIGICTFTAYSLEKQRVSGVLQGSQPSEIGVVRLVMLGVARKYQKRGFGQDLLC DFFEHVKIIHQALPIKGVYLDADPAAINFYARLGFVQLSATPNAFGAVPMFLAIQHILAA >gi|299857056|gb|ADWS01000008.1| GENE 74 77840 - 78745 478 301 aa, chain - ## HITS:1 COG:STM0437 KEGG:ns NR:ns ## COG: STM0437 COG0790 # Protein_GI_number: 16763818 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Salmonella typhimurium LT2 # 19 297 214 497 503 153 36.0 4e-37 MLIVSPSVVASEKAHELYDSIYGGKPAPDVINTLHKMAESGDIDAQSLLGWEYYQPRYDT KPDVQEAIKWFELAAKQGDREAPLALGGIYYDGEQVRVDYAKAYALFNQAAQHGVNLAWS RLGIMYANGQYVEVDCKKAKEYLDKGVHIYGGPEDFLATCRKDMIDRKTVDDTLPVITVT RSGMRDNFLDKGFSCMDSLFATTNKLGEVANLRVTFSIRRPSGKEINQTVGFAPFGLNRL NISFTDYLFGSFTSNSSLILYKPEFERKSCATVRTTIVAATATINGKDVELLKAGAIEQK W >gi|299857056|gb|ADWS01000008.1| GENE 75 79183 - 80547 1527 454 aa, chain + ## HITS:1 COG:yajR KEGG:ns NR:ns ## COG: yajR COG0477 # Protein_GI_number: 16128412 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 454 3 456 456 810 98.0 0 MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLT QAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAV MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIA LTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLA DAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQT QFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGW IDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANEALKVRLLETEG VKEVLIAEEEHSAYVKIDSKVTNRFEVEQAIRQA >gi|299857056|gb|ADWS01000008.1| GENE 76 80675 - 81166 695 163 aa, chain - ## HITS:1 COG:ECs0480 KEGG:ns NR:ns ## COG: ECs0480 COG1666 # Protein_GI_number: 15829734 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 163 7 169 169 280 100.0 7e-76 MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDASKTIKVLSESDFQVNQ LLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGIESATQKKIVKMIKDSKLK VQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKNFRD >gi|299857056|gb|ADWS01000008.1| GENE 77 81334 - 82245 738 303 aa, chain + ## HITS:1 COG:apbA KEGG:ns NR:ns ## COG: apbA COG1893 # Protein_GI_number: 16128410 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Escherichia coli K12 # 1 303 1 303 303 622 99.0 1e-178 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDF LATSDLLLVTLKAWQVYDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTH AARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVN CVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAE NISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYERIGTGLP RPW >gi|299857056|gb|ADWS01000008.1| GENE 78 82208 - 82798 703 196 aa, chain + ## HITS:1 COG:ECs0478 KEGG:ns NR:ns ## COG: ECs0478 COG0693 # Protein_GI_number: 15829732 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli O157:H7 # 1 196 3 198 198 382 99.0 1e-106 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP IGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE VASQLVMAAGIYNYYE >gi|299857056|gb|ADWS01000008.1| GENE 79 82852 - 84300 1587 482 aa, chain - ## HITS:1 COG:ECs0477_1 KEGG:ns NR:ns ## COG: ECs0477_1 COG0301 # Protein_GI_number: 15829731 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 402 1 402 402 791 99.0 0 MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQR LAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFS SIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDV LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV AINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN LRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKI EAEEEKFDFSILDKVVEEANNVDIREIAQQTEQEVVEVETVNGFGPNDVILDIRSIDEQE DKPLKVEGIDVVSLPFYKLSTKFGDLDQNRTWLLWCERGVMSRLQALYLREQGFNNVKVY RP >gi|299857056|gb|ADWS01000008.1| GENE 80 84506 - 84748 382 80 aa, chain + ## HITS:1 COG:ECs0476 KEGG:ns NR:ns ## COG: ECs0476 COG1722 # Protein_GI_number: 15829730 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Escherichia coli O157:H7 # 1 80 1 80 80 112 100.0 1e-25 MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRV QILLSDNEDASLTPFTPDNE >gi|299857056|gb|ADWS01000008.1| GENE 81 84748 - 85647 808 299 aa, chain + ## HITS:1 COG:ispA KEGG:ns NR:ns ## COG: ispA COG0142 # Protein_GI_number: 16128406 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Escherichia coli K12 # 1 299 1 299 299 535 100.0 1e-152 MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFG VSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL AFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRH KTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQG ADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK >gi|299857056|gb|ADWS01000008.1| GENE 82 85672 - 87534 1946 620 aa, chain + ## HITS:1 COG:ECs0474 KEGG:ns NR:ns ## COG: ECs0474 COG1154 # Protein_GI_number: 15829728 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 620 1 620 620 1266 99.0 0 MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELT VALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSV GHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLND NEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPG TLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHA VPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFP DRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDR AGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGN AVGVELTPLEKLPIGKGIVKRRGEKLAILNFGTLMPDAAKVAESLNATLVDMRFVKPLDE ALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEM RAELGLDATGMEAKIKAWLA >gi|299857056|gb|ADWS01000008.1| GENE 83 87566 - 87715 75 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLPLLPYSSYFKLHVLRLHSFTPVTYLCKLLGLHSFAAFLQLELFRVYE >gi|299857056|gb|ADWS01000008.1| GENE 84 87714 - 88688 1020 324 aa, chain + ## HITS:1 COG:yajO KEGG:ns NR:ns ## COG: yajO COG0667 # Protein_GI_number: 16128404 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 324 25 348 348 655 99.0 0 MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANS YSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDGSLRRLGMDY VDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALKLQKQHGWAQFV SMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLY KESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVD ITLKPEQIAELETPYKPHPVVGFK >gi|299857056|gb|ADWS01000008.1| GENE 85 88742 - 89260 622 172 aa, chain - ## HITS:1 COG:pgpA KEGG:ns NR:ns ## COG: pgpA COG1267 # Protein_GI_number: 16128403 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Escherichia coli K12 # 1 172 1 172 172 313 100.0 8e-86 MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLAAIPFWYLMTFLPWQLY SLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALPTNDWQWVAAGFVIF RILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGILS >gi|299857056|gb|ADWS01000008.1| GENE 86 89238 - 90215 1048 325 aa, chain - ## HITS:1 COG:thiL KEGG:ns NR:ns ## COG: thiL COG0611 # Protein_GI_number: 16128402 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Escherichia coli K12 # 1 325 1 325 325 639 99.0 0 MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDID PADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLESFSDSLFDLLNYYDMQLIG GDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTPGDSAAGLAILQNRLQVADA KDADYLIKRHLRPSPRILQGQALRDLANSAIDFSDGLISDLGHIVKASDCGARIDLALLP FSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTADI EGLCFIRDGEPVTFDWKGYDHFATP >gi|299857056|gb|ADWS01000008.1| GENE 87 90293 - 90712 499 139 aa, chain - ## HITS:1 COG:ECs0469 KEGG:ns NR:ns ## COG: ECs0469 COG0781 # Protein_GI_number: 15829723 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Escherichia coli O157:H7 # 1 139 1 139 139 245 100.0 2e-65 MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTA YLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSH KFVNGVLDKAAPVIRPNKK >gi|299857056|gb|ADWS01000008.1| GENE 88 90732 - 91202 609 156 aa, chain - ## HITS:1 COG:ECs0468 KEGG:ns NR:ns ## COG: ECs0468 COG0054 # Protein_GI_number: 15829722 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 258 100.0 4e-69 MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQVKDENITVVWVPGAYEL PLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLAHVAQDSEIPVAFGVLTTE SIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA >gi|299857056|gb|ADWS01000008.1| GENE 89 91291 - 92394 811 367 aa, chain - ## HITS:1 COG:ribD_2 KEGG:ns NR:ns ## COG: ribD_2 COG1985 # Protein_GI_number: 16128399 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Escherichia coli K12 # 144 367 1 224 224 432 97.0 1e-121 MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAG EKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGI DVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDV QRQRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPVRIVIDSQNRVTP EHRIVQQPGETWFARTQEDSSEWPETVRTLLIPEHKGHLDLVILMMQLGKQQINSIWVEA GPTLAGALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLEKLADAPQFKFKEIRHVGPDV CLHLVGA >gi|299857056|gb|ADWS01000008.1| GENE 90 92398 - 92847 453 149 aa, chain - ## HITS:1 COG:ECs0466 KEGG:ns NR:ns ## COG: ECs0466 COG1327 # Protein_GI_number: 15829720 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Escherichia coli O157:H7 # 1 149 1 149 149 272 100.0 1e-73 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD KVAYIRFASVYRSFEDIKEFGEEIARLED >gi|299857056|gb|ADWS01000008.1| GENE 91 92998 - 93537 425 179 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1598 NR:ns ## KEGG: APECO1_1598 # Name: yajI # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 179 21 199 199 293 98.0 2e-78 MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLNKETVKITQQNRLNAKS SSGVYLLPGAKTPARLESQIGTLRMSLVNITPDADGTTLTLRIQGESNDPLPAFSGTVEY GQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKGISVDQLGFVRIHDIQPVMQ >gi|299857056|gb|ADWS01000008.1| GENE 92 93836 - 94720 1216 294 aa, chain + ## HITS:1 COG:Ztsx KEGG:ns NR:ns ## COG: Ztsx COG3248 # Protein_GI_number: 15800140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Nucleoside-binding outer membrane protein # Organism: Escherichia coli O157:H7 EDL933 # 1 294 1 294 294 523 99.0 1e-148 MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLE YEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEIEPRFSIDKLTNTDLSFGP FKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMSLSMNVYAKYQWQNYGAANEN EWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLGDDSGNAINGIKTRTNNSIASSH ILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGNFNVRSTGWGGYLVVGYNF >gi|299857056|gb|ADWS01000008.1| GENE 93 94897 - 95244 429 115 aa, chain - ## HITS:1 COG:no KEGG:c0520 NR:ns ## KEGG: c0520 # Name: yajD # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 115 24 138 138 236 100.0 2e-61 MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSN WELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK >gi|299857056|gb|ADWS01000008.1| GENE 94 95373 - 96344 1050 323 aa, chain - ## HITS:1 COG:ECs0460 KEGG:ns NR:ns ## COG: ECs0460 COG0341 # Protein_GI_number: 15829714 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 613 100.0 1e-175 MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEI TLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAEGETGGQVLGSQVLKVINE STNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHD VIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVS LTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLG MKREHMLQQKVEKEGADQPSILP >gi|299857056|gb|ADWS01000008.1| GENE 95 96355 - 98169 2013 604 aa, chain - ## HITS:1 COG:ECs0459 KEGG:ns NR:ns ## COG: ECs0459 COG0342 # Protein_GI_number: 15829713 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Escherichia coli O157:H7 # 1 604 12 615 615 1113 100.0 0 MLIVVIVIGLLYALPNLFGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEE GAILARFDSTDTQLRAREALMGVMGDKYVVALNLAPATPRWLAAIHAEPMKLGLDLRGGV HFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKENNYGLSITFRDAKARDEAIA YLSKRHPDLVISSQGSNQLRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQ PVVLYKRVILTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVE YKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIA PIQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIV GIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFS SIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVK KLSI >gi|299857056|gb|ADWS01000008.1| GENE 96 98230 - 98562 493 110 aa, chain - ## HITS:1 COG:ECs0458 KEGG:ns NR:ns ## COG: ECs0458 COG1862 # Protein_GI_number: 15829712 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 201 100.0 4e-52 MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGD EVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL >gi|299857056|gb|ADWS01000008.1| GENE 97 98585 - 99712 1073 375 aa, chain - ## HITS:1 COG:ECs0457 KEGG:ns NR:ns ## COG: ECs0457 COG0343 # Protein_GI_number: 15829711 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Escherichia coli O157:H7 # 1 375 1 375 375 798 100.0 0 MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFH LWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPI FLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRERFDSLGNKN ALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKP RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKYKSDTGPLDP ECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTD FYQRQGREVPPLNVD >gi|299857056|gb|ADWS01000008.1| GENE 98 99768 - 100838 1087 356 aa, chain - ## HITS:1 COG:ECs0456 KEGG:ns NR:ns ## COG: ECs0456 COG0809 # Protein_GI_number: 15829710 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Escherichia coli O157:H7 # 1 356 1 356 356 705 99.0 0 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNN TRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMT ARHGALFEVEFNDDRSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPT AGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAV LAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNF HLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE >gi|299857056|gb|ADWS01000008.1| GENE 99 100931 - 101512 461 193 aa, chain + ## HITS:1 COG:yajB KEGG:ns NR:ns ## COG: yajB COG3124 # Protein_GI_number: 16128389 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 193 1 193 193 350 98.0 1e-96 MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVTGIHMHRRIDVLTDNLPEVRE AREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRF INLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQF YPRMMAQASHKAL >gi|299857056|gb|ADWS01000008.1| GENE 100 101517 - 103331 1558 604 aa, chain - ## HITS:1 COG:malZ KEGG:ns NR:ns ## COG: malZ COG0366 # Protein_GI_number: 16128388 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 604 2 605 605 1243 99.0 0 MLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVSMHKQRSQQQPG VTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWA ADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLD GISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLG MRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPK LDYQSESLVNEIYRGEDSIVRHWLKAPWSMDGWRLDVVHMLGEAGGARNNMQHVAGITEA AKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQT CMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIY YGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDN VVVFVRVLNQQRVLVAINRGEACEVVLPASPLLNAVQWQCKEGHGQLTDGILALPAISAT VWMN >gi|299857056|gb|ADWS01000008.1| GENE 101 103490 - 104863 1538 457 aa, chain - ## HITS:1 COG:ECs0452 KEGG:ns NR:ns ## COG: ECs0452 COG1113 # Protein_GI_number: 15829706 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 783 100.0 0 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMR ALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPT VPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQ PTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP MRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINS DVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVI ASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIG YHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ >gi|299857056|gb|ADWS01000008.1| GENE 102 104939 - 106258 1424 439 aa, chain - ## HITS:1 COG:ECs0451 KEGG:ns NR:ns ## COG: ECs0451 COG1114 # Protein_GI_number: 15829705 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Escherichia coli O157:H7 # 1 439 1 439 439 741 100.0 0 MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTV VALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSAL PLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEA YQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLT LLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTC ACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFT RSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMV VLAIIWDRAAGRQVTSSAH >gi|299857056|gb|ADWS01000008.1| GENE 103 106665 - 107960 1071 431 aa, chain - ## HITS:1 COG:phoR KEGG:ns NR:ns ## COG: phoR COG0642 # Protein_GI_number: 16128385 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 431 1 431 431 839 99.0 0 MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVD RSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGI FWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVM PYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVRE KALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQT FTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPG IAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFV IPERLIAKNSD >gi|299857056|gb|ADWS01000008.1| GENE 104 108018 - 108707 644 229 aa, chain - ## HITS:1 COG:ECs0449 KEGG:ns NR:ns ## COG: ECs0449 COG0745 # Protein_GI_number: 15829703 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 449 100.0 1e-126 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGS GIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVM RRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLL NHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF >gi|299857056|gb|ADWS01000008.1| GENE 105 108897 - 110099 805 400 aa, chain + ## HITS:1 COG:ECs0448 KEGG:ns NR:ns ## COG: ECs0448 COG0420 # Protein_GI_number: 15829702 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 800 99.0 0 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRNG TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRTQIIGGMEHVRYCGS PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPITQPMAVLKGDLASITAQLEQWRDVS QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA >gi|299857056|gb|ADWS01000008.1| GENE 106 110096 - 113239 2968 1047 aa, chain + ## HITS:1 COG:ZsbcC KEGG:ns NR:ns ## COG: ZsbcC COG0419 # Protein_GI_number: 15800123 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli O157:H7 EDL933 # 1 1047 1 1047 1047 1476 98.0 0 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPGGNLQVPRVELARCA DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTNEEKQLLTAQQ QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVASALAQHAE QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQTLEPGVNQSRLLALENEVK KLGEEGAALRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDDLPHSEETVALDNWR QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRE NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK ERIPVQIKVKKINGLGYSKLESTFAVK >gi|299857056|gb|ADWS01000008.1| GENE 107 113281 - 114549 958 422 aa, chain + ## HITS:1 COG:ECs0446 KEGG:ns NR:ns ## COG: ECs0446 COG2814 # Protein_GI_number: 15829700 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli O157:H7 # 29 422 1 394 394 628 99.0 1e-180 MALLVVILQAITLLATVIGSRSGGCDGGMKKVILSLALGTFGLGMAEFGIMGVLTELAHN VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYL MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ EFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGKLREQFHFLRSPAPWLIFAATMFGN AGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRVSGRYSPLRIAAVTD FIIVLALLMLFFCGGMKITSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIA FNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKP LG >gi|299857056|gb|ADWS01000008.1| GENE 108 114692 - 115600 294 302 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 3 298 6 316 319 117 31 3e-25 MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTV GMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAA GAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWIDEDELRYREEVPCYCGK QGCIETFISGTGFATDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVV NILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWP QE >gi|299857056|gb|ADWS01000008.1| GENE 109 115725 - 116636 1172 303 aa, chain + ## HITS:1 COG:rdgC KEGG:ns NR:ns ## COG: rdgC COG2974 # Protein_GI_number: 16128378 # Func_class: L Replication, recombination and repair # Function: DNA recombination-dependent growth factor C # Organism: Escherichia coli K12 # 1 303 1 303 303 572 100.0 1e-163 MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVA NGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAF SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWV RSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRI QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE AQR >gi|299857056|gb|ADWS01000008.1| GENE 110 116714 - 117076 274 120 aa, chain - ## HITS:1 COG:no KEGG:G2583_0501 NR:ns ## KEGG: G2583_0501 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 120 32 151 151 243 98.0 2e-63 MRSQNGGSTDLPRYWITLDKNVIWDYPKDFIAGNGGVRNFHGETCWYPYLTDICSISDLL REYIDTPKAELLTKQFTSDKWGLVNILRAADRRIGMRRLDQLQHKTHNIAALKIIARRSE >gi|299857056|gb|ADWS01000008.1| GENE 111 117337 - 117621 270 94 aa, chain - ## HITS:1 COG:ECs0441 KEGG:ns NR:ns ## COG: ECs0441 COG3123 # Protein_GI_number: 15829695 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 94 1 94 94 175 100.0 2e-44 MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDAT DWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL >gi|299857056|gb|ADWS01000008.1| GENE 112 117693 - 118370 656 225 aa, chain - ## HITS:1 COG:no KEGG:S0334 NR:ns ## KEGG: S0334 # Name: aroM # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 225 1 225 225 401 100.0 1e-111 MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILT LLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILP PLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSLGNPIHDSEQKIIDAGKELLA KGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIARLAAELLV >gi|299857056|gb|ADWS01000008.1| GENE 113 118628 - 118819 218 63 aa, chain - ## HITS:1 COG:no KEGG:LF82_2523 NR:ns ## KEGG: LF82_2523 # Name: yaiA # Def: uncharacterized protein YaiA # Organism: E.coli_LF82 # Pathway: not_defined # 1 63 1 63 63 90 100.0 2e-17 MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDP DKE >gi|299857056|gb|ADWS01000008.1| GENE 114 118869 - 119393 399 174 aa, chain - ## HITS:1 COG:ECs0438 KEGG:ns NR:ns ## COG: ECs0438 COG0703 # Protein_GI_number: 15829692 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Escherichia coli O157:H7 # 1 174 1 174 174 333 100.0 7e-92 MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRAR ETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLR PTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC >gi|299857056|gb|ADWS01000008.1| GENE 115 119576 - 120034 398 152 aa, chain - ## HITS:1 COG:ECs0436 KEGG:ns NR:ns ## COG: ECs0436 COG1671 # Protein_GI_number: 15829691 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 152 41 192 192 291 100.0 2e-79 MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNE IVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGI QTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG >gi|299857056|gb|ADWS01000008.1| GENE 116 120154 - 120963 895 269 aa, chain + ## HITS:1 COG:proC KEGG:ns NR:ns ## COG: proC COG0345 # Protein_GI_number: 16128371 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Escherichia coli K12 # 1 269 1 269 269 489 100.0 1e-138 MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEV AQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMP NTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVF MFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAV RVLEEKGFRAAVIEAMTKCMEKSEKLSKS >gi|299857056|gb|ADWS01000008.1| GENE 117 120980 - 122080 607 366 aa, chain - ## HITS:1 COG:yaiC_2 KEGG:ns NR:ns ## COG: yaiC_2 COG2199 # Protein_GI_number: 16128370 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 196 366 1 171 171 353 99.0 3e-97 MNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPP PGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTA MLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVVYP LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA ITAMLRVREGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN RTEVAA >gi|299857056|gb|ADWS01000008.1| GENE 118 122197 - 122517 268 106 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1624 NR:ns ## KEGG: APECO1_1624 # Name: psiF # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 106 7 112 112 161 100.0 5e-39 MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKN SKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA >gi|299857056|gb|ADWS01000008.1| GENE 119 122636 - 124051 1220 471 aa, chain - ## HITS:1 COG:phoA KEGG:ns NR:ns ## COG: phoA COG1785 # Protein_GI_number: 16128368 # Func_class: P Inorganic ion transport and metabolism # Function: Alkaline phosphatase # Organism: Escherichia coli K12 # 1 471 24 494 494 866 99.0 0 MKQSTIALALLSLLFTPVTKARTPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDSLS DKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDY VTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAA LVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAG EWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGN IDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQ IGETVDLDEAVQRALEFAKKDGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVM VMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK >gi|299857056|gb|ADWS01000008.1| GENE 120 124152 - 124412 258 86 aa, chain - ## HITS:1 COG:no KEGG:SSON_0357 NR:ns ## KEGG: SSON_0357 # Name: yaiB # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 86 1 86 86 132 100.0 5e-30 MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIDQVEGALYEVK PDASIPDDDTELLRDYVKKLLKHPRQ >gi|299857056|gb|ADWS01000008.1| GENE 121 124875 - 125969 1157 364 aa, chain + ## HITS:1 COG:ECs0431 KEGG:ns NR:ns ## COG: ECs0431 COG1181 # Protein_GI_number: 15829685 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli O157:H7 # 1 364 1 364 364 728 100.0 0 MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLN ADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGML RVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGL PLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECAVLGNDNPQ ASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCAGMAR VDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELALERHAADNAL KTTM >gi|299857056|gb|ADWS01000008.1| GENE 122 125993 - 126205 347 70 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C0397 NR:ns ## KEGG: UTI89_C0397 # Name: yaiZ # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 70 45 114 114 138 100.0 5e-32 MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVGLVTWVISFWLAGLIIR RRDEETENAQ >gi|299857056|gb|ADWS01000008.1| GENE 123 126465 - 126773 309 102 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1629 NR:ns ## KEGG: APECO1_1629 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 102 1 102 102 200 100.0 1e-50 MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNLLVHAPGVYERLMQVQE TGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ >gi|299857056|gb|ADWS01000008.1| GENE 124 126832 - 127926 963 364 aa, chain - ## HITS:1 COG:no KEGG:SDY_0368 NR:ns ## KEGG: SDY_0368 # Name: yaiW # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 364 1 364 364 706 99.0 0 MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKDL ATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLV HTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPMGQTLFGSLNPVRTGGPMQVS IAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA SRNAAFQNAVSKASSVKLALDGDLIRYDSKEPGKTELATRKLAAKLGMSDSEIRRQLEKG DSFSFEETALYKKVYQLAEAKTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRAR CMKQ >gi|299857056|gb|ADWS01000008.1| GENE 125 127939 - 129159 1272 406 aa, chain - ## HITS:1 COG:ECs0427 KEGG:ns NR:ns ## COG: ECs0427 COG1133 # Protein_GI_number: 15829681 # Func_class: I Lipid transport and metabolism # Function: ABC-type long-chain fatty acid transport system, fused permease and ATPase components # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 754 99.0 0 MFKSFFPKPGAFFLSAFVWALIAVIFWQAGGGDWVARITGASGQIPISAARFWSLDFLIF YAYYIVCVGLFAFFWFIYSPHRWQYWSILGTALIIFVTWFLVEVGVAVNAWYAPFYDLIQ TALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVSHYVFRWRTAMNEYYMANWQQ LRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIAFLPVLVTLSAHVPELPIIGHIP YGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVEAAYRKELVYGEDDATRATPPTVRE LFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFGLFLLFPSIVAGTITLGLMTQITNVFG QVRGAFQYLINSWTTLVELMSIYKRLRSFEHELDGDKIQEVTHTLS >gi|299857056|gb|ADWS01000008.1| GENE 126 129179 - 129373 98 64 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0372 NR:ns ## KEGG: ECIAI1_0372 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 64 1 64 64 119 100.0 3e-26 MPAFVILRVLIRLCKQSLVCEIRRNNSYGQAGELSALLWVTMGGFIWLTLCSGHAVNTQQ LLKR >gi|299857056|gb|ADWS01000008.1| GENE 127 129511 - 130668 1028 385 aa, chain + ## HITS:1 COG:ECs0426 KEGG:ns NR:ns ## COG: ECs0426 COG1680 # Protein_GI_number: 15829680 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli O157:H7 # 1 385 1 385 385 760 100.0 0 MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFYGSGATGMALVVIDGNQ RVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGA RVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTREQRWKYLSTAKLKAAPGSQ AAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMKDTTYTPSPDQCRRLMVAERGAS PCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQRSNQADRMQTLIYQRAQFTKVIGMD VPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGFITYMAMIPQKNIGAFVVVTRSPLTRF KNMSDGINDLVTELSGNKPLVIPAS >gi|299857056|gb|ADWS01000008.1| GENE 128 130669 - 131337 313 222 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0411 NR:ns ## KEGG: ECUMN_0411 # Name: yaiV # Def: putative DNA-binding transcriptional regulator # Organism: E.coli_UMN026 # Pathway: not_defined # 1 222 1 222 222 449 100.0 1e-125 MPVKDLTGITAKDAQMLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNSEDTF VILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITL IEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNY IHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY >gi|299857056|gb|ADWS01000008.1| GENE 129 131380 - 134268 2544 962 aa, chain - ## HITS:1 COG:yaiU KEGG:ns NR:ns ## COG: yaiU COG3468 # Protein_GI_number: 16128359 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 495 962 1 467 467 676 91.0 0 MHSWKKKLVVSQLALACTLAITSQANATTYNTFGYHDDAVTLFNWGDNTKTDHDYLTYGG YVYDHAADGYFDTVFSGDTVNGVISTYYLNHDYGTDTANTLNITNSNIHGMITSDQIGYG DYVWTNGSDYTGHDWVDGDIFTLNIANSTIDDDFDAFYFNDTYLDADGKTSKTDYDRLVT AALGTAVTLDVESNINISNNSHVAGITLVQNDLGNATYNTEGHQWDNNIVVNNSTVTSGS LSEDEQSDRGHFGNSVEPSDYGNGASGADDVALAFIDDDTSDYRMVNNVTFNNSQLLGDV VFDSTWNANFDATGHLIDNSTTAYTHGGWATDDQNVDHLNLTLNNTKWVGSANIDYDVVV ADEAFYDVAPNSLNPYASYSEDGWNRVDNANAFQSGVFDVVLNNGSDWETTKDSLIDTLA INSGSQVNVSADSSLTSDTITLNGSSSMEVNGEVNTDHLIIDTFSTVNFGEDTASAWTSA PLYANTITVTNGGVLDVNTNMNDISSVFATDTLELTSGNVKDNNGNVYAGVFDIHSNDYI LNADLVNDRTNDTSKANYGYGVIAMNSDGHLTVNGNNDINNGDEVDNSSVDNVVAATGNY KVRIDNSTGAGAIADYAGKQLIYIDDTKTNATFSAANKADLGAYTYQAEQRGNTVVLQQM ELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTI NYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFA NNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGS ISGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDS NNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKY TW >gi|299857056|gb|ADWS01000008.1| GENE 130 134226 - 134417 76 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLIVILQVSFSRSAFVIPPQGRNKLIHQLSMHRKHIMFRANDYAALQTNGSIILSPKSEC GHI >gi|299857056|gb|ADWS01000008.1| GENE 131 134792 - 135766 1007 324 aa, chain + ## HITS:1 COG:ECs0423 KEGG:ns NR:ns ## COG: ECs0423 COG0113 # Protein_GI_number: 15829677 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Escherichia coli O157:H7 # 1 324 12 335 335 620 100.0 1e-178 MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKH LAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTC FCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALD AAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQG ADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGS IKRAGADLIFSYFALDLAEKKILR >gi|299857056|gb|ADWS01000008.1| GENE 132 135872 - 136723 889 283 aa, chain - ## HITS:1 COG:ECs0422 KEGG:ns NR:ns ## COG: ECs0422 COG2175 # Protein_GI_number: 15829676 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Probable taurine catabolism dioxygenase # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 565 99.0 1e-161 MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQTITPQQQRAL AQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELP STGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAK NPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLGFLFAHITKPEFQVRWRW QPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKPFYRAG >gi|299857056|gb|ADWS01000008.1| GENE 133 136720 - 137547 998 275 aa, chain - ## HITS:1 COG:ECs0421 KEGG:ns NR:ns ## COG: ECs0421 COG0600 # Protein_GI_number: 15829675 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 275 1 275 275 419 99.0 1e-117 MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLA KLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIE LYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLG ASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATD VVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ >gi|299857056|gb|ADWS01000008.1| GENE 134 137544 - 138311 271 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 205 1 215 245 108 31 1e-22 MLQISHLYADYGGKPVLEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQL AGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEKMQRLEIAHQMLKKVGLEG AEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQETGK QVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFARRFVAGESSRSIKSDPQFIAMR EYVLSRVFEQREAFS >gi|299857056|gb|ADWS01000008.1| GENE 135 138324 - 139286 1113 320 aa, chain - ## HITS:1 COG:tauA KEGG:ns NR:ns ## COG: tauA COG4521 # Protein_GI_number: 16128350 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type taurine transport system, periplasmic component # Organism: Escherichia coli K12 # 1 320 20 339 339 584 99.0 1e-167 MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKESGATVDWRKFDS GASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDL IGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAV NALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPD AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTVELTGPVNKAIIDTAQFLKEQ GKVPAVANDYSQYVTSRFVQ >gi|299857056|gb|ADWS01000008.1| GENE 136 139240 - 139464 111 74 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_0388 NR:ns ## KEGG: EcE24377A_0388 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 74 1 74 74 132 98.0 4e-30 MNASAARSVLRDEIAMIVCSPVLLWEQYSGIKTFIKRISRYRTDDFILSKKTAKERLNMQ LLRSNNWENYYTSF >gi|299857056|gb|ADWS01000008.1| GENE 137 139902 - 140573 385 223 aa, chain + ## HITS:1 COG:yaiS KEGG:ns NR:ns ## COG: yaiS COG2120 # Protein_GI_number: 16128349 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Escherichia coli K12 # 50 185 1 136 136 274 99.0 8e-74 MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKGIYIAAVVMTTGNSGTD GIIDRHEESRNALKILGCHQTIHLNFADTRAHLQLNDMISALEDIIKNQIPSDVEIMRVY TMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSFMPQVFESVKEEYFTVKLAAL KKHKSQERRDYMRHDRLRAVAQFRGQQVNSDLGEGFVIHKMIL >gi|299857056|gb|ADWS01000008.1| GENE 138 140583 - 141779 662 398 aa, chain + ## HITS:1 COG:yaiP KEGG:ns NR:ns ## COG: yaiP COG1215 # Protein_GI_number: 16128348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 398 1 398 398 801 99.0 0 MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCR VICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADT YVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVKLPMIVMKRTLQQLLG GAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTLVANGYRIRQANRCIVYPQECNS PREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIFPMLLVVIYGVGIYLTTWFNEFITT GPHGVVLAMFPLIWIGVVCVIGAFSAWFHRCWLLVPLAPLSVVYVLLAYAIWIIYGLIAF FTGREPQRDKPTRYSALVEASTAYSQPSVTGTEKLSEA >gi|299857056|gb|ADWS01000008.1| GENE 139 141646 - 142338 328 230 aa, chain + ## HITS:1 COG:b0359 KEGG:ns NR:ns ## COG: b0359 COG0110 # Protein_GI_number: 16128344 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 94 230 11 147 147 267 99.0 1e-71 MDLLPFLLDANLSATNPPAIPHWWKRQPLIPNLLSQELKNYLKLNVKEKNIQIADQVIID ETAGEVVIGANTRICHGAVIQGPVVIGANCLIGNYAFIRPGTIISNGVKIGFATEIKNAV IEAEATIGPQCFIADSVVANQAYLGAQVRTSNHRLDEQPVSVRTPEGIIATGCDKLGCYI GQRSRLGVQVIILPGRIISPNTQLGPRVIVERNLPAGTYSLRQELIRTGD >gi|299857056|gb|ADWS01000008.1| GENE 140 142340 - 143113 785 257 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0383 NR:ns ## KEGG: ECSE_0383 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 257 1 257 257 481 100.0 1e-134 MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAYAELVAKVENATLLFNL SQGRRDYETENFNATRGQGAVWYKWNNWLTTRTGIAFADNTPVFARQDFRQDINLALLPK TLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTHYDSSDAGGSYSNMISVRLND PRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQRIQPLTEQLNLGLTAGKVWYDTP TDDYNGLQLAAHLTWKF >gi|299857056|gb|ADWS01000008.1| GENE 141 143298 - 143573 213 91 aa, chain + ## HITS:1 COG:ECs0412 KEGG:ns NR:ns ## COG: ECs0412 COG1937 # Protein_GI_number: 15829666 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 91 8 98 98 154 100.0 4e-38 MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLMAEVLESH IRETFDRNDCYSREVSQSVDDTIELVRAYLK >gi|299857056|gb|ADWS01000008.1| GENE 142 143608 - 144717 1266 369 aa, chain + ## HITS:1 COG:ECs0411 KEGG:ns NR:ns ## COG: ECs0411 COG1062 # Protein_GI_number: 15829665 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Escherichia coli O157:H7 # 1 369 1 369 369 727 100.0 0 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVL GHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPD GTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHN TAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPND YDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRP FQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEG KSIRTVIRY >gi|299857056|gb|ADWS01000008.1| GENE 143 144810 - 145643 692 277 aa, chain + ## HITS:1 COG:yaiM KEGG:ns NR:ns ## COG: yaiM COG0627 # Protein_GI_number: 16128340 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli K12 # 1 277 1 277 277 561 97.0 1e-160 MELIEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAANEKLPVLYWLSGLTCNEQNFI TKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDY IRNELPDLVMQHFPATTRKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWG QQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR >gi|299857056|gb|ADWS01000008.1| GENE 144 145768 - 146307 579 179 aa, chain - ## HITS:1 COG:yaiL KEGG:ns NR:ns ## COG: yaiL COG3122 # Protein_GI_number: 16128339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 179 40 218 218 295 99.0 3e-80 MAKLTLQEQLLKAGLVTSKKAAKVERTAKKSRVQVREARAAVEENKKAQLERDKQLSEQQ KQAALAKEYKAQVKQLIEMNRITIANGDIGFNFTDGNLIKKIFVDKLTQAQLINGRLAIA RLLVDNNSEGEYAIIPASVADKIAQRDASSIVLHSALSAEEQDEDDPYADFKVPDDLMW >gi|299857056|gb|ADWS01000008.1| GENE 145 146409 - 147620 1022 403 aa, chain - ## HITS:1 COG:mhpT KEGG:ns NR:ns ## COG: mhpT COG0477 # Protein_GI_number: 16128338 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 13 403 28 418 418 571 99.0 1e-163 MSTRTPSSSSSRLMLTIGLCFLVALMEGLDLQAAGIAAGGIAQAFALDKMQMGWIFSAGI LGLLPGALVGGMLADRYGRKRILIGSVALFGLFSLATAIAWDFPSLVFARLMTGVGLGAA LPNLIALTSEAAGPRFRGTAVSLMYCGVPIGAALAATLGFAGANLAWQTVFWVGGVVPLI LVPLLMRWLPESAVFAGEKQAAPPLRALFAPETATATLLLWLCYFFTLLVVYMLINWLPL LLVEQGFQPSQAAGVMFALQMGAASGTLMLGALMDKLRPVTMSLLIYSGMLASLLALGTV SSFNGMLLAGFVAGLFATGGQSVLYALAPLFYSSQIRATGVGTAVAVGRLGAMSGPLLAG KMLALGTGTVGVMAASAPGILVAGLAVFILMSRRSRMQPCADA >gi|299857056|gb|ADWS01000008.1| GENE 146 147796 - 148809 1208 337 aa, chain - ## HITS:1 COG:mhpE KEGG:ns NR:ns ## COG: mhpE COG0119 # Protein_GI_number: 16128337 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Escherichia coli K12 # 1 337 1 337 337 631 100.0 0 MNGKKLYISDVTLRDGMHAIRHQYSLENVRQIAKALDDARVDSIEVAHGDGLQGSSFNYG FGAHSDLEWIEAAADVVKHAKIATLLLPGIGTIHDLKNAWQAGARVVRVATHCTEADVSA QHIQYARELGMDTVGFLMMSHMTTPENLAKQAKLMEGYGATCIYVVDSGGAMNMSDIRDR FRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCDRIDASLAGMGAGAGNAPLEVFI AAADKLGWQHGTDLYALMDAADDLVRPLQDRPVRVDRETLALGYAGVYSSFLRHCETAAA RYGLSAVDILVELGKRRMVGGQEDMIVDVALDLRNNK >gi|299857056|gb|ADWS01000008.1| GENE 147 148806 - 149756 981 316 aa, chain - ## HITS:1 COG:mhpF KEGG:ns NR:ns ## COG: mhpF COG4569 # Protein_GI_number: 16128336 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acetaldehyde dehydrogenase (acetylating) # Organism: Escherichia coli K12 # 1 316 1 316 316 578 100.0 1e-165 MSKRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGLARARRMGVATTHEGVI GLMNMPEFADIDIVFDATSAGAHVKNDAALREAKPDIRLIDLTPAAIGPYCVPVVNLEAN VDQLNVNMVTCGGQATIPMVAAVSRVARVHYAEIIASIASKSAGPGTRANIDEFTETTSR AIEVVGGAAKGKAIIVLNPAEPPLMMRDTVYVLSDEASQDDIEASINEMAEAVQAYVPGY RLKQRVQFEVIPQDKPVNLPGVGQFSGLKTAVWLEVEGAAHYLPAYAGNLDIMTSSALAT AEKMAQSLARKAGEAA >gi|299857056|gb|ADWS01000008.1| GENE 148 149753 - 150562 800 269 aa, chain - ## HITS:1 COG:mhpD KEGG:ns NR:ns ## COG: mhpD COG3971 # Protein_GI_number: 16128335 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase # Organism: Escherichia coli K12 # 1 269 3 271 271 534 99.0 1e-152 MTKHTLEQLAADLRRAAEQGEAIAPLRDLIGIDNAEAAYAIQHINVQYDVAQGRRVVGRK VGLTHPKVQQQLGVDQPDFGTLFADMCYGDNEIIPFSRVLQPRIEAEIALVLNRDLPATD ITFDELYNAIEWVLPALEVVGSRIRDWSIQFVDTVADNASCGVYVIGGPAQRPAGLDLKN CAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMASLGEPLRAGDIILTGALGPMVAVN AGDRFEAHIEGIGSVAATFSSAAPKGSLS >gi|299857056|gb|ADWS01000008.1| GENE 149 150572 - 151438 955 288 aa, chain - ## HITS:1 COG:mhpC KEGG:ns NR:ns ## COG: mhpC COG0596 # Protein_GI_number: 16128334 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 288 22 309 309 600 99.0 1e-171 MSYQPQTEAATSRFLNVEEAGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDP LVEAGYRVILLDCPGWGKSDSIVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSS VAFTLNWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFD TSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDR FVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLNFLARP >gi|299857056|gb|ADWS01000008.1| GENE 150 151456 - 152400 799 314 aa, chain - ## HITS:1 COG:no KEGG:ECO111_0384 NR:ns ## KEGG: ECO111_0384 # Name: mhpB # Def: 3-(2,3-dihydroxyphenyl)propionate dioxygenase # Organism: E.coli_O111_H- # Pathway: Phenylalanine metabolism [PATH:eoi00360] # 1 314 1 314 314 642 100.0 0 MHAYLHCLSHSPLVGYVDPAQEVLDEVNGVIASARERIAAFSPELVVLFAPDHYNGFFYD VMPPFCLGVGATAIGDFGSAAGELPVPVELAEACAHAVMKSGIDLAVSYCMQVDHGFAQP LEFLLGGLDKVPVLPVFINGVATPLPGFQRTRMLGEAIGRFTSTLNKRVLFLGSGGLSHQ PPVPELAKADAHMRDRLLGSGKDLPASERELRQQRVISAAEKFVEDQRTLHPLNPIWDNQ FMTLLEQGRIQELDAVSNEELSAIAGKSTHEIKTWVAAFAAISTFGNWRSEGRYYRPIPE WIAGFGSLSARTEN >gi|299857056|gb|ADWS01000008.1| GENE 151 152402 - 154066 1839 554 aa, chain - ## HITS:1 COG:mhpA KEGG:ns NR:ns ## COG: mhpA COG0654 # Protein_GI_number: 16128332 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 554 1 554 554 1135 99.0 0 MAIQHPDIQPAVNHSVQVAIAGAGPVGLMMANYLGQMGIDVLVVEKLDKLIDYPRAIGID DEALRTMQSVGLVDDVLPHTTPWHAMRFLTPKGRCFADIQPMTDEFGWPRRNAFIQPQVD AVMLEGLSRFPNVRCLFSRELEAFSQQNDEVTLHLKTAEGQRETVKAQWLVACDGGASFV RRTLNVPFEGKTAPNQWIVVDIANDPLSTPHIYLCCDPVRPYVSAALPHAVRRFEFMVMP GETEEQLREPQNMRKLLSKVLPNPDNVELIRQRVYTHNARLAQRFRIDRVLLAGDAAHIM PVWQGQGYNSGMRDAFNLAWKLALVIQGKARDALLDTYQQERRDHAKAMIDLSVTAGNVL APPKRWQGTLRDGVSWLLNYLPPVKRYFLEMRFKPMPQYYGGALVREGEAKHSPVGKMFI QPKVTLENGDVTLLDNAIGANFAVIGWGCNPLWGMSDEQIQQWRALGTRFIQVVPEVQIH TAQDNHDGVLRVGDTQGRLRSWFAQHNASLVVMRPDRFVAATAIPQTLGKTLNKLASVMT LTRPDADVSVEKVA >gi|299857056|gb|ADWS01000008.1| GENE 152 154245 - 155090 750 281 aa, chain + ## HITS:1 COG:mhpR KEGG:ns NR:ns ## COG: mhpR COG1414 # Protein_GI_number: 16128331 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 281 35 315 315 513 99.0 1e-145 MSINMQNNEQTEYKTVRGLTRGLMLLNMLNKLDGGASVGLLAELSGLHRTTVRRLLETLQ EEGYVRRSPSDDSFRLTIKVRQLSEGFRDEQWISALAAPLLGDLLREVVWPTDVSTLDVD AMVVRETTHRFSRLSFHRAMVGRRLPLLKTASGLTWLAFCPEQDRKELIEMLASRPGDDY QLAREPLKLEAILARARKEGYGQNYRGWDQEEKIASIAVPLRSEQRVIGCLNLVYMASAM TIEQAAEKHLPALQRVAKQIEEGVESQAILVAGRRSGVHLR >gi|299857056|gb|ADWS01000008.1| GENE 153 155158 - 156249 904 363 aa, chain + ## HITS:1 COG:lacI KEGG:ns NR:ns ## COG: lacI COG1609 # Protein_GI_number: 16128330 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 4 363 1 360 360 640 99.0 0 MVNVKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLA GKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQ RVSGLIINYPLDDQDATAVEAACANVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVAL GHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGI VPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLG QTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLE SGQ >gi|299857056|gb|ADWS01000008.1| GENE 154 156372 - 159446 2441 1024 aa, chain + ## HITS:1 COG:lacZ KEGG:ns NR:ns ## COG: lacZ COG3250 # Protein_GI_number: 16128329 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 1 1024 1 1024 1024 2057 98.0 0 MTMITDSLVVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR FAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPAENP TGCYSLTFNIDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSTFLRA GENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPSTQISDFHVATHFNDDFSRAV LEAEVQMYGELRDELRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPK LWSAEIPNLYRAVVELHTADGTLIEAEASDVGFREVRIENGLLLLNGKPLLIRGVNRHEH HPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHG MVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVD PSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYA HAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDR QFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALD GKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQ WRLAANLSVTLPSAPHAIPQLTTSETDFCIELDNKRWQFNRQSGFLSQMWIGDEKQLLTP LRDQFIRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTV HAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLTCQLAQVAERVNWLG LGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGSHQWRGDFQFNI SRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLV WCQK >gi|299857056|gb|ADWS01000008.1| GENE 155 159498 - 160751 1307 417 aa, chain + ## HITS:1 COG:lacY KEGG:ns NR:ns ## COG: lacY COG0477 # Protein_GI_number: 16128328 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 417 1 417 417 687 100.0 0 MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQ PLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNA GAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGIMFTINNQFVFWLGSGCALIL AVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFD QQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMS VRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQL AMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA >gi|299857056|gb|ADWS01000008.1| GENE 156 160830 - 161984 1040 384 aa, chain - ## HITS:1 COG:cynX KEGG:ns NR:ns ## COG: cynX COG2807 # Protein_GI_number: 16128326 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Escherichia coli K12 # 1 383 1 383 384 586 98.0 1e-167 MLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQ HVSERRSVAISLLLIAVGALMRELYPQSVLLLSSALLGGVGIGIIQAVMPSVIKRRFQQR TPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVA SSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALM TLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLWAMVCGLGLGGA FPLCLLLALDHSAQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALC VVGLMIITLRFAPARFPQLWVKEV >gi|299857056|gb|ADWS01000008.1| GENE 157 162017 - 162487 775 156 aa, chain - ## HITS:1 COG:cynS KEGG:ns NR:ns ## COG: cynS COG1513 # Protein_GI_number: 16128325 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate lyase # Organism: Escherichia coli K12 # 1 156 1 156 156 290 99.0 9e-79 MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARL VGAKLDLDEDAILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGI ISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF >gi|299857056|gb|ADWS01000008.1| GENE 158 162518 - 163177 543 219 aa, chain - ## HITS:1 COG:ZcynT KEGG:ns NR:ns ## COG: ZcynT COG0288 # Protein_GI_number: 15800068 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli O157:H7 EDL933 # 1 219 1 219 219 427 99.0 1e-120 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVI RNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQCMDHMPAVS HWLRYADSARVVNEARPHSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGW VYDIESGCIAAFDGATRQFVPLAANPRVCAIPLRQPTAA >gi|299857056|gb|ADWS01000008.1| GENE 159 163287 - 164186 475 299 aa, chain + ## HITS:1 COG:ECs0391 KEGG:ns NR:ns ## COG: ECs0391 COG0583 # Protein_GI_number: 15829645 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 545 98.0 1e-155 MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDA GEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPGI TLQLQEMSQEKIEDLLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAACEQ VALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLL PAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALEECADVGENESR >gi|299857056|gb|ADWS01000008.1| GENE 160 164226 - 165509 1311 427 aa, chain - ## HITS:1 COG:codA KEGG:ns NR:ns ## COG: codA COG0402 # Protein_GI_number: 16128322 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 427 1 427 427 879 99.0 0 MSNNALQTIINARLPGEEGLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVE PHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHV RTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADV VGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHREGMG ARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVK EMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSAR TLNLQDYGIAAGNSANLIILPAENGFDALRRQVPVRYSVRGGKVIASTQPAQTTVYLEQP EAIDYKR >gi|299857056|gb|ADWS01000008.1| GENE 161 165499 - 166758 1431 419 aa, chain - ## HITS:1 COG:codB KEGG:ns NR:ns ## COG: codB COG1457 # Protein_GI_number: 16128321 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Escherichia coli K12 # 1 419 1 419 419 671 99.0 0 MSQDNNFSQGPVPQSARKGVLALTFVMLGLTFFSASMWTGGTLGTGLSYHDFFLAVLIGN LLLGIYTSFLGYIGAKTGLTTHLLARFSFGVKGSWLPSLLLGGTQVGWFGVGVAMFAIPV GKATGLDINLLIAVSGLLMTVTVFFGISALTVLSVIAVPAIACLGGYSVWLAVNGMGGLD ALKAVVPAQPLDFNVALALVVGSFISAGTLTADFVRFGRNAKLAVLVAMVAFFLGNSLMF IFGAAGAAALGMADISDVMIAQGLLLPAIVVLGLNIWTTNDNALYASGLGFANITGMSSK TLSVINGIIGTVCALWLYNNFVGWLTFLSAAIPPVGGVIIADYLMNRRRYEHFATTRMMS VNWVAILAVALGIAAGHWLPGIVPVNAVLGGALSYLILNPILNRKTTAAMTHVEANSVK >gi|299857056|gb|ADWS01000008.1| GENE 162 166995 - 168881 1943 628 aa, chain - ## HITS:1 COG:ECs0388 KEGG:ns NR:ns ## COG: ECs0388 COG0365 # Protein_GI_number: 15829642 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Escherichia coli O157:H7 # 1 628 1 628 628 1279 99.0 0 MSFSEFYQRSINEPEQFWAEQARRIDWQTPFTQTLDHSNPPFARWFCEGRTNLCHNAIDR WLEKQPEALALIAVSSETEEERTFTFRQLHDEVNAVASMLRSLGVQRGDRVLVYMPMIAE AHITLLACARIGAIHSVVFGGFASHSVAARIDDAKPVLIVSADAGARGGKIIPYKKLLDD AISQAQHQPRHVLLVDRGLAKMARVSGRDVDFASLRYQHIGARVPVAWLESNETSCILYT SGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGGVFFCASDIGWVVGHSYIVYAPLLAG MATIVYEGLPTWPDCGVWWKIVEKYQVSRMFSAPTAIRVLKKFPTAEIRKHDLSSLEVLY LAGEPLDEPTASWVSNTLDVPVIDNYWQTESGWPIMAIARGLDDRPTRLGSPGVPMYGYN VQLLNEVTGEPCGVNEKGMLVVEGPLPPGCIQTIWGDDGRFVKTYWSLFSRPVYATFDWG IRDADGYHFILGRTDDVINVAGHRLGTREIEESISSHPGVAEVAVVGVKDALKGQVAVAF VIPKESDSLEDRDVAHSQEKAIMALVDSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQA ICEGRDPGDLTTIDDPASLDQIRQAMEE >gi|299857056|gb|ADWS01000008.1| GENE 163 168921 - 170372 1571 483 aa, chain - ## HITS:1 COG:prpD KEGG:ns NR:ns ## COG: prpD COG2079 # Protein_GI_number: 16128319 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Escherichia coli K12 # 1 483 1 483 483 1006 99.0 0 MSAQINNIRPEFDREIVDIVDYVMNYEISSKVAYDTAHYCLLDTLGCGLEALEYPACKKL LGPIVPGTVVPNGVRVPGTQFQLDPVQAAFNIGAMIRWLDFNDTWLAAEWGHPSDNLGGI LATADWLSRNAVASGKAPLTMKQVLTAMIKAHEIQGCIALENSFNRVGLDHVLLVKVAST AVVAEMLGLTREEILNAVSLAWVDGQSLRTYRHAPNTGTRKSWAAGDATSRAVRLALMAK TGEMGYPSALTAPVWGFYDVSFKGESFRFQRPYGSYVMENVLFKISFPAEFHSQTAVEAA MTLYEQMQAAGKTAADIEKVTIRTHEACIRIIDKKGPLNNPADRDHCIQYMVAIPLLFGR LTAADYEDNVAQDKRIDALREKINCFEDPAFTADYHDPEKRAIANAITLEFTDGTRFEEV VVEYPIGHARRRQDGIPKLVDKFKINLARQFPTRQQQRILEVSLDRTRLEQMPVNEYLDL YVI >gi|299857056|gb|ADWS01000008.1| GENE 164 170406 - 171575 1181 389 aa, chain - ## HITS:1 COG:ECs0386 KEGG:ns NR:ns ## COG: ECs0386 COG0372 # Protein_GI_number: 15829640 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Escherichia coli O157:H7 # 1 389 1 389 389 776 99.0 0 MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAEHCEFEE VAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCT LPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGE KPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGANE VSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSQEGGS LKMYNIADRLETVMWESKKMFPNLDWFSAVSYNMMGVPTEMFTPLFVIARVTGWAAHIIE QRQDNKIIRPSANYVGPEDRQFVALDKRQ >gi|299857056|gb|ADWS01000008.1| GENE 165 171620 - 172510 1000 296 aa, chain - ## HITS:1 COG:prpB KEGG:ns NR:ns ## COG: prpB COG2513 # Protein_GI_number: 16128316 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Escherichia coli K12 # 1 296 1 296 296 557 99.0 1e-159 MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLG ISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGA KRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEA GAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAF RAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEAKLDDLFARSQVK >gi|299857056|gb|ADWS01000008.1| GENE 166 172748 - 174334 1444 528 aa, chain + ## HITS:1 COG:prpR KEGG:ns NR:ns ## COG: prpR COG1221 # Protein_GI_number: 16128315 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli K12 # 1 528 1 528 528 1023 99.0 0 MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANE RCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALV AFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAA TVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSA AVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEE GAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVD VRVISATHCKLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAAL SAPFSAALRQGLQASETVLVHYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFLQLLLP ELARESAKTPAPRLLTPQQALEKFNGDKTAAANYLGISRTTFWRRLKS >gi|299857056|gb|ADWS01000008.1| GENE 167 174432 - 174707 382 91 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0373 NR:ns ## KEGG: ECUMN_0373 # Name: yahO # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 91 1 91 91 134 98.0 1e-30 MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIK KADEKGADVLVLTSGQTDNKIHGTANIYKKK >gi|299857056|gb|ADWS01000008.1| GENE 168 174893 - 175525 492 210 aa, chain + ## HITS:1 COG:yahN KEGG:ns NR:ns ## COG: yahN COG1280 # Protein_GI_number: 16128313 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli K12 # 1 210 14 223 223 378 100.0 1e-105 MDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLF GLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPISAPWYVFFRRGLI TDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAY GRMQRVASRVIGAIIGVFALRLIYEGVTQR >gi|299857056|gb|ADWS01000008.1| GENE 169 176199 - 177014 337 271 aa, chain - ## HITS:1 COG:no KEGG:ECO111_0365 NR:ns ## KEGG: ECO111_0365 # Name: yahL # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 271 1 271 271 484 100.0 1e-135 MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFKVLIKQYYDYPYDCRDD LVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMDYPDHPVKFVFRILENQKG TVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDCKCILLEHHMPLLRIFPKGKE CMRVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIHPVFPESLVMLLLSVLDVKTYRDD ARLNEWISNRVQELGDRYYPVNKHVKIRYTL >gi|299857056|gb|ADWS01000008.1| GENE 170 177257 - 177616 320 119 aa, chain - ## HITS:1 COG:yahK KEGG:ns NR:ns ## COG: yahK COG1064 # Protein_GI_number: 16128310 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli K12 # 1 119 231 349 349 250 100.0 5e-67 MAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIA GSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLTD Prediction of potential genes in microbial genomes Time: Sun May 15 22:03:06 2011 Seq name: gi|299857055|gb|ADWS01000009.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont8.1, whole genome shotgun sequence Length of sequence - 155554 bp Number of predicted genes - 147, with homology - 143 Number of transcription units - 79, operones - 32 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 42 - 101 2.2 1 1 Op 1 . + CDS 124 - 1242 790 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 1252 - 1283 2.4 2 1 Op 2 . + CDS 1290 - 1403 142 ## + Term 1444 - 1484 -0.5 + Prom 1546 - 1605 7.4 3 2 Op 1 12/0.000 + CDS 1664 - 2230 379 ## COG3038 Cytochrome B561 4 2 Op 2 . + CDS 2234 - 2809 574 ## COG2353 Uncharacterized conserved protein + Term 2813 - 2865 8.2 - Term 2806 - 2844 6.9 5 3 Tu 1 . - CDS 2851 - 3903 916 ## COG1054 Predicted sulfurtransferase - Prom 3974 - 4033 5.9 + Prom 3943 - 4002 4.8 6 4 Tu 1 . + CDS 4128 - 5048 867 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 5131 - 5170 0.3 + Prom 5107 - 5166 2.5 7 5 Op 1 . + CDS 5220 - 6446 785 ## COG0477 Permeases of the major facilitator superfamily 8 5 Op 2 . + CDS 6529 - 6903 510 ## G2583_1310 acidic protein MsyB + Term 7145 - 7199 4.2 9 6 Tu 1 . - CDS 6904 - 7131 311 ## COG5645 Predicted periplasmic lipoprotein - Prom 7152 - 7211 3.2 - Term 7141 - 7173 3.1 10 7 Op 1 7/0.036 - CDS 7304 - 9817 2314 ## COG2943 Membrane glycosyltransferase 11 7 Op 2 . - CDS 9840 - 11393 1554 ## COG3131 Periplasmic glucans biosynthesis protein - Prom 11583 - 11642 4.8 + Prom 11528 - 11587 3.2 12 8 Tu 1 . + CDS 11769 - 12926 662 ## SSON_1060 glucans biosynthesis protein + Term 12981 - 13017 4.0 13 9 Op 1 2/0.857 - CDS 12934 - 14355 727 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 14 9 Op 2 . - CDS 14357 - 14890 352 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 - Prom 14913 - 14972 1.5 15 10 Tu 1 . - CDS 14985 - 15296 223 ## ECIAI39_2119 hypothetical protein 16 11 Tu 1 . - CDS 15417 - 15749 209 ## ECS88_1055 putative autoagglutination protein - Term 15757 - 15785 1.0 17 12 Op 1 . - CDS 15808 - 16263 397 ## B21_01046 hypothetical protein 18 12 Op 2 . - CDS 16304 - 16786 299 ## ECH74115_1421 curlin minor subunit - Prom 16824 - 16883 3.7 19 13 Op 1 . + CDS 17513 - 18163 229 ## COG2771 DNA-binding HTH domain-containing proteins 20 13 Op 2 . + CDS 18168 - 18557 130 ## APECO1_124 curli assembly protein CsgE 21 13 Op 3 . + CDS 18612 - 18998 362 ## ECSP_1339 curli assembly protein CsgF 22 13 Op 4 . + CDS 19025 - 19858 723 ## COG1462 Uncharacterized protein involved in formation of curli polymers + Term 19870 - 19900 0.2 - Term 19858 - 19888 0.2 23 14 Op 1 . - CDS 19922 - 20443 555 ## SSON_1045 hypothetical protein 24 14 Op 2 5/0.286 - CDS 20515 - 21069 722 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 25 14 Op 3 3/0.750 - CDS 21093 - 21830 726 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family 26 14 Op 4 . - CDS 21885 - 22823 526 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + TRNA 23057 - 23144 68.6 # Ser GGA 0 0 - Term 23328 - 23359 4.1 27 15 Tu 1 . - CDS 23598 - 24284 330 ## SSON_1040 hypothetical protein - Prom 24452 - 24511 6.7 - Term 24813 - 24849 6.3 28 16 Tu 1 . - CDS 24864 - 25928 615 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase - Prom 26028 - 26087 6.1 29 17 Op 1 9/0.000 - CDS 26191 - 27462 1132 ## COG2837 Predicted iron-dependent peroxidase 30 17 Op 2 7/0.036 - CDS 27468 - 28595 1543 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 31 17 Op 3 1/0.964 - CDS 28653 - 29483 919 ## COG0672 High-affinity Fe2+/Pb2+ permease - Prom 29636 - 29695 4.6 32 18 Tu 1 . - CDS 30025 - 31533 1730 ## COG0591 Na+/proline symporter - Prom 31627 - 31686 2.9 33 19 Tu 1 . - CDS 31692 - 31901 131 ## EcSMS35_2110 hypothetical protein - Prom 32057 - 32116 2.3 + Prom 31783 - 31842 7.9 34 20 Tu 1 . + CDS 31956 - 35918 4576 ## COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase + Term 35926 - 35966 6.2 - Term 35911 - 35954 2.0 35 21 Tu 1 . - CDS 35958 - 36596 637 ## COG1309 Transcriptional regulator - Prom 36725 - 36784 4.0 + Prom 36684 - 36743 4.3 36 22 Op 1 4/0.500 + CDS 36884 - 37975 988 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 37 22 Op 2 2/0.857 + CDS 37975 - 38667 697 ## COG1335 Amidases related to nicotinamidase 38 22 Op 3 5/0.286 + CDS 38679 - 39065 414 ## COG0251 Putative translation initiation inhibitor, yjgF family 39 22 Op 4 4/0.500 + CDS 39073 - 39873 679 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 40 22 Op 5 5/0.286 + CDS 39883 - 40473 444 ## COG0778 Nitroreductase 41 22 Op 6 1/0.964 + CDS 40484 - 40978 288 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 42 22 Op 7 . + CDS 40999 - 42327 724 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 42398 - 42430 -0.8 - Term 42324 - 42354 3.3 43 23 Tu 1 . - CDS 42410 - 42583 94 ## COG3729 General stress protein - Prom 42748 - 42807 5.6 + Prom 42727 - 42786 4.9 44 24 Op 1 . + CDS 42956 - 43552 691 ## COG0655 Multimeric flavodoxin WrbA 45 24 Op 2 . + CDS 43573 - 43800 379 ## LF82_2690 uncharacterized protein YccJ + Term 43806 - 43844 3.5 46 25 Tu 1 . - CDS 43838 - 45079 1474 ## ECO111_1113 glucose-1-phosphatase/inositol phosphatase - Prom 45273 - 45332 3.3 - Term 45186 - 45228 1.8 47 26 Tu 1 . - CDS 45371 - 46630 312 ## ECO26_1556 hypothetical protein - Prom 46667 - 46726 4.0 48 27 Op 1 . + CDS 46890 - 47810 1025 ## COG2214 DnaJ-class molecular chaperone 49 27 Op 2 . + CDS 47810 - 48115 359 ## ECB_01002 modulator of CbpA co-chaperone 50 28 Op 1 5/0.286 - CDS 48208 - 48807 591 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 51 28 Op 2 7/0.036 - CDS 48804 - 51350 2619 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 52 28 Op 3 . - CDS 51350 - 52522 1030 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit - Prom 52550 - 52609 4.8 + Prom 52487 - 52546 4.9 53 29 Tu 1 . + CDS 52652 - 53344 747 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 54 30 Tu 1 . - CDS 53317 - 54345 652 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 54424 - 54483 2.2 + Prom 54324 - 54383 3.3 55 31 Op 1 1/0.964 + CDS 54458 - 57172 2429 ## COG0642 Signal transduction histidine kinase 56 31 Op 2 . + CDS 57244 - 58317 622 ## COG0348 Polyferredoxin + Term 58472 - 58508 2.6 - Term 58318 - 58358 8.2 57 32 Tu 1 . - CDS 58365 - 58538 256 ## ECB_00994 predicted regulator of phosphatidylethanolamine synthesis - Prom 58660 - 58719 4.2 - Term 58697 - 58727 1.0 58 33 Tu 1 . - CDS 58932 - 59144 303 ## COG1278 Cold shock proteins - Prom 59333 - 59392 6.0 + Prom 59314 - 59373 6.8 59 34 Tu 1 . + CDS 59430 - 59642 203 ## COG1278 Cold shock proteins + Prom 59830 - 59889 6.6 60 35 Tu 1 . + CDS 60084 - 60389 171 ## + Term 60427 - 60463 4.1 + Prom 60460 - 60519 7.8 61 36 Op 1 . + CDS 60562 - 61140 353 ## B21_00996 hypothetical protein 62 36 Op 2 . + CDS 61182 - 61883 437 ## SSON_0992 hypothetical protein 63 36 Op 3 . + CDS 61883 - 63979 1760 ## ECO111_1095 hypothetical protein 64 36 Op 4 6/0.071 + CDS 64025 - 65164 851 ## COG1596 Periplasmic protein involved in polysaccharide export 65 36 Op 5 3/0.750 + CDS 65152 - 65598 488 ## COG0394 Protein-tyrosine-phosphatase 66 36 Op 6 . + CDS 65618 - 67798 2265 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis + Term 67878 - 67913 6.0 67 37 Op 1 . - CDS 67913 - 69211 712 ## B21_00990 hypothetical protein 68 37 Op 2 . - CDS 69291 - 69383 62 ## 69 37 Op 3 31/0.000 - CDS 69396 - 70532 1078 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 70 37 Op 4 . - CDS 70544 - 72088 1580 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 - Prom 72121 - 72180 2.2 71 38 Op 1 . - CDS 72222 - 73079 672 ## B21_00987 hypothetical protein 72 38 Op 2 . - CDS 73076 - 73474 454 ## ECO111_1087 hydrogenase-1 operon protein HyaE 73 38 Op 3 7/0.036 - CDS 73471 - 74058 694 ## COG0680 Ni,Fe-hydrogenase maturation factor 74 38 Op 4 8/0.036 - CDS 74055 - 74762 723 ## COG1969 Ni,Fe-hydrogenase I cytochrome b subunit 75 38 Op 5 11/0.000 - CDS 74781 - 76574 1891 ## COG0374 Ni,Fe-hydrogenase I large subunit 76 38 Op 6 . - CDS 76571 - 77689 733 ## COG1740 Ni,Fe-hydrogenase I small subunit - Prom 77845 - 77904 2.7 + TRNA 78116 - 78203 76.9 # Ser TGA 0 0 + Prom 78128 - 78187 80.4 77 39 Op 1 2/0.857 + CDS 78410 - 79069 764 ## COG0670 Integral membrane protein, interacts with FtsH + Term 79089 - 79128 3.1 + Prom 79077 - 79136 4.8 78 39 Op 2 . + CDS 79160 - 79489 537 ## COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit - Term 79382 - 79425 1.6 79 40 Tu 1 . - CDS 79486 - 79764 386 ## COG1254 Acylphosphatases - Prom 79848 - 79907 2.4 + Prom 79730 - 79789 2.0 80 41 Op 1 3/0.750 + CDS 79859 - 81049 582 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative 81 41 Op 2 . + CDS 81107 - 81424 404 ## COG3785 Uncharacterized conserved protein + Term 81434 - 81479 12.8 - Term 81425 - 81464 9.0 82 42 Tu 1 . - CDS 81469 - 81882 620 ## COG1832 Predicted CoA-binding protein - Prom 82002 - 82061 3.7 83 43 Op 1 . + CDS 81857 - 82015 78 ## EcSMS35_2154 hypothetical protein 84 43 Op 2 3/0.750 + CDS 82055 - 82717 607 ## COG3110 Uncharacterized protein conserved in bacteria + Term 82727 - 82753 -1.0 85 43 Op 3 . + CDS 82804 - 83271 401 ## COG1803 Methylglyoxal synthase + Term 83279 - 83310 4.1 - Term 83180 - 83218 1.2 86 44 Tu 1 . - CDS 83303 - 85375 1523 ## COG0210 Superfamily I DNA and RNA helicases - Prom 85424 - 85483 4.7 + Prom 85388 - 85447 3.6 87 45 Op 1 5/0.286 + CDS 85480 - 85926 494 ## COG3304 Predicted membrane protein 88 45 Op 2 . + CDS 85936 - 88098 1908 ## COG1289 Predicted membrane protein + Term 88114 - 88162 3.9 89 46 Tu 1 . - CDS 88061 - 88690 504 ## COG3070 Regulator of competence-specific genes - Prom 88745 - 88804 4.5 + Prom 88663 - 88722 5.8 90 47 Tu 1 . + CDS 88909 - 89418 269 ## COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation + Term 89489 - 89532 3.1 + Prom 89563 - 89622 12.2 91 48 Tu 1 . + CDS 89775 - 90827 1204 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Term 90838 - 90886 11.3 - Term 90836 - 90863 1.5 92 49 Tu 1 . - CDS 90903 - 91355 483 ## COG3120 Uncharacterized protein conserved in bacteria - Prom 91381 - 91440 4.0 + Prom 91454 - 91513 3.7 93 50 Op 1 8/0.036 + CDS 91541 - 93301 1482 ## COG1067 Predicted ATP-dependent protease 94 50 Op 2 . + CDS 93370 - 93888 730 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases + Term 93916 - 93951 4.5 - Term 93903 - 93940 9.1 95 51 Tu 1 . - CDS 93958 - 94125 89 ## COG3130 Ribosome modulation factor - Prom 94202 - 94261 3.3 - Term 94318 - 94358 4.1 96 52 Op 1 8/0.036 - CDS 94381 - 94944 633 ## COG3009 Uncharacterized protein conserved in bacteria 97 52 Op 2 11/0.000 - CDS 94941 - 96581 1555 ## COG3008 Paraquat-inducible protein B 98 52 Op 3 5/0.286 - CDS 96586 - 97839 739 ## COG2995 Uncharacterized paraquat-inducible protein A - Prom 97903 - 97962 1.6 99 53 Op 1 6/0.071 - CDS 97969 - 99876 2375 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 100 53 Op 2 . - CDS 99887 - 101995 179 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative - Prom 102168 - 102227 5.8 + Prom 102114 - 102173 3.4 101 54 Tu 1 . + CDS 102239 - 103348 665 ## COG3217 Uncharacterized Fe-S protein - Term 103040 - 103101 0.5 102 55 Tu 1 . - CDS 103345 - 103887 470 ## SSON_0950 hypothetical protein - Prom 103987 - 104046 6.7 - Term 103984 - 104039 12.9 103 56 Tu 1 . - CDS 104061 - 105071 892 ## COG0167 Dihydroorotate dehydrogenase - Prom 105103 - 105162 4.0 104 57 Tu 1 . + CDS 105015 - 105224 151 ## gi|213615837|ref|ZP_03371663.1| hypothetical protein SentesTyp_15729 105 58 Tu 1 . - CDS 105182 - 105574 188 ## COG3121 P pilus assembly protein, chaperone PapD - Prom 105720 - 105779 1.6 - Term 105712 - 105738 -0.6 106 59 Op 1 4/0.500 - CDS 105885 - 106400 259 ## COG3539 P pilus assembly protein, pilin FimA 107 59 Op 2 4/0.500 - CDS 106408 - 106950 244 ## COG3539 P pilus assembly protein, pilin FimA 108 59 Op 3 6/0.071 - CDS 106962 - 108005 321 ## COG3539 P pilus assembly protein, pilin FimA - Term 108152 - 108192 -0.7 109 60 Op 1 10/0.000 - CDS 108195 - 110627 1552 ## COG3188 P pilus assembly protein, porin PapC 110 60 Op 2 7/0.036 - CDS 110652 - 111353 325 ## COG3121 P pilus assembly protein, chaperone PapD - Prom 111373 - 111432 4.0 - Term 111371 - 111404 4.5 111 61 Tu 1 . - CDS 111436 - 111987 299 ## COG3539 P pilus assembly protein, pilin FimA + Prom 112076 - 112135 5.1 112 62 Op 1 4/0.500 + CDS 112334 - 112909 565 ## COG0431 Predicted flavoprotein 113 62 Op 2 5/0.286 + CDS 112902 - 113861 984 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 114 62 Op 3 8/0.036 + CDS 113858 - 115003 1153 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 115 62 Op 4 24/0.000 + CDS 115014 - 115805 750 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 116 62 Op 5 . + CDS 115802 - 116569 216 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 + Term 116726 - 116770 3.7 117 63 Tu 1 . - CDS 116776 - 119388 2933 ## COG0308 Aminopeptidase N - Prom 119495 - 119554 4.4 + Prom 119499 - 119558 3.5 118 64 Tu 1 . + CDS 119606 - 120856 1173 ## COG1488 Nicotinic acid phosphoribosyltransferase + Term 120865 - 120894 1.2 119 65 Tu 1 . - CDS 120862 - 121131 86 ## + Prom 120907 - 120966 6.4 120 66 Tu 1 . + CDS 121025 - 122425 1707 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases + Term 122440 - 122471 4.1 + Prom 122813 - 122872 7.8 121 67 Tu 1 . + CDS 123027 - 124115 1406 ## COG3203 Outer membrane protein (porin) + Term 124140 - 124180 4.2 + Prom 124206 - 124265 5.0 122 68 Tu 1 . + CDS 124300 - 125490 1495 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Term 125680 - 125711 1.1 - Term 125538 - 125575 2.2 123 69 Op 1 7/0.036 - CDS 125712 - 126359 597 ## COG0491 Zn-dependent hydrolases, including glyoxylases 124 69 Op 2 9/0.000 - CDS 126386 - 126934 428 ## COG3108 Uncharacterized protein conserved in bacteria - Prom 126987 - 127046 2.4 - Term 126980 - 127026 5.5 125 69 Op 3 4/0.500 - CDS 127115 - 128962 1297 ## COG2989 Uncharacterized protein conserved in bacteria - Prom 129078 - 129137 6.5 - Term 129186 - 129216 3.0 126 70 Op 1 8/0.036 - CDS 129223 - 133683 5739 ## COG3096 Uncharacterized protein involved in chromosome partitioning 127 70 Op 2 7/0.036 - CDS 133683 - 134387 752 ## COG3095 Uncharacterized protein involved in chromosome partitioning 128 70 Op 3 6/0.071 - CDS 134368 - 135690 1598 ## COG3006 Uncharacterized protein involved in chromosome partitioning 129 70 Op 4 . - CDS 135687 - 136472 691 ## COG0500 SAM-dependent methyltransferases - Prom 136605 - 136664 5.2 130 71 Tu 1 . + CDS 136608 - 137387 700 ## COG1434 Uncharacterized conserved protein + Term 137609 - 137646 -0.9 131 72 Tu 1 . - CDS 137364 - 138257 632 ## JW0902 conserved hypothetical protein - Prom 138294 - 138353 4.8 - Term 138338 - 138379 3.4 132 73 Op 1 11/0.000 - CDS 138411 - 139157 804 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 133 73 Op 2 4/0.500 - CDS 139154 - 139336 161 ## COG2835 Uncharacterized conserved protein 134 73 Op 3 4/0.500 - CDS 139388 - 140620 831 ## COG3214 Uncharacterized protein conserved in bacteria 135 73 Op 4 9/0.000 - CDS 140657 - 141643 600 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 136 73 Op 5 5/0.286 - CDS 141640 - 143388 242 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 137 73 Op 6 . - CDS 143425 - 145116 464 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 138 73 Op 7 2/0.857 - CDS 145123 - 145689 298 ## COG0658 Predicted membrane metal-binding protein - Prom 145770 - 145829 2.8 - Term 145833 - 145873 8.3 139 74 Tu 1 . - CDS 145896 - 146180 376 ## COG0776 Bacterial nucleoid DNA-binding protein - Term 146225 - 146254 3.5 140 75 Op 1 . - CDS 146300 - 146398 150 ## PROTEIN SUPPORTED gi|238903721|ref|ZP_04649193.1| ribosomal protein S1 141 75 Op 2 21/0.000 - CDS 146340 - 148013 2807 ## PROTEIN SUPPORTED gi|15800772|ref|NP_286786.1| 30S ribosomal protein S1 - Term 148067 - 148103 1.3 142 75 Op 3 3/0.750 - CDS 148124 - 148807 267 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 - Prom 148845 - 148904 5.0 - Term 148832 - 148865 2.3 143 76 Tu 1 . - CDS 148980 - 149768 827 ## COG0501 Zn-dependent protease with chaperone function - Prom 149801 - 149860 2.6 - Term 149838 - 149869 2.0 144 77 Op 1 6/0.071 - CDS 149913 - 151196 1313 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase - Term 151214 - 151247 4.1 145 77 Op 2 4/0.500 - CDS 151267 - 152355 1076 ## COG1932 Phosphoserine aminotransferase - Prom 152412 - 152471 3.3 146 78 Tu 1 . - CDS 152554 - 153246 716 ## COG2323 Predicted membrane protein - Prom 153332 - 153391 1.9 + Prom 153203 - 153262 2.9 147 79 Tu 1 . + CDS 153376 - 155136 1885 ## COG1944 Uncharacterized conserved protein + Term 155146 - 155174 0.7 Predicted protein(s) >gi|299857055|gb|ADWS01000009.1| GENE 1 124 - 1242 790 372 aa, chain + ## HITS:1 COG:ECs1437 KEGG:ns NR:ns ## COG: ECs1437 COG0665 # Protein_GI_number: 15830691 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 780 99.0 0 MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKY VPLVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADSAFLANVAHSAEQWQLNVEKLDAQ GIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDD GVTIETVDGEYQAKKAIVCAGTWVKDLLPELPVQPVRKVFAWYQADGRYSVKNKFPAFTG ELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVLPGIG CCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDKKSD FDLTPFRLSRFQ >gi|299857055|gb|ADWS01000009.1| GENE 2 1290 - 1403 142 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF >gi|299857055|gb|ADWS01000009.1| GENE 3 1664 - 2230 379 188 aa, chain + ## HITS:1 COG:ECs1435 KEGG:ns NR:ns ## COG: ECs1435 COG3038 # Protein_GI_number: 15830689 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 345 100.0 2e-95 MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLM MGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLFAIGISGYLISTADGKPIS VFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLG KSSSDYGV >gi|299857055|gb|ADWS01000009.1| GENE 4 2234 - 2809 574 191 aa, chain + ## HITS:1 COG:ECs1434 KEGG:ns NR:ns ## COG: ECs1434 COG2353 # Protein_GI_number: 15830688 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 360 100.0 1e-99 MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFT FDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELD ITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVD LIISVEGVQQK >gi|299857055|gb|ADWS01000009.1| GENE 5 2851 - 3903 916 350 aa, chain - ## HITS:1 COG:yceA KEGG:ns NR:ns ## COG: yceA COG1054 # Protein_GI_number: 16129018 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Escherichia coli K12 # 1 350 1 350 350 737 99.0 0 MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDALYQLFTALNVFGRVYL AHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVAD GIDDPHFDASNVGEYLQAAEVNAMLDDPDVLFIDMRNHYEYEVGHFENALEIPADTFREQ LPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGL PVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYK GCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLGIPDPTE >gi|299857055|gb|ADWS01000009.1| GENE 6 4128 - 5048 867 306 aa, chain + ## HITS:1 COG:ECs1432 KEGG:ns NR:ns ## COG: ECs1432 COG1560 # Protein_GI_number: 15830686 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 618 100.0 1e-177 MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVH RNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQ AQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPLIDWLQTWGRLRSNKSMLDRK DLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFV PRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPE GVPSRY >gi|299857055|gb|ADWS01000009.1| GENE 7 5220 - 6446 785 408 aa, chain + ## HITS:1 COG:yceE KEGG:ns NR:ns ## COG: yceE COG0477 # Protein_GI_number: 16129016 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 408 1 408 408 715 100.0 0 MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVF SITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLL GGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITAS VLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAP ILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVL LLIPMSYVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGN VTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRRIPQVSN >gi|299857055|gb|ADWS01000009.1| GENE 8 6529 - 6903 510 124 aa, chain + ## HITS:1 COG:no KEGG:G2583_1310 NR:ns ## KEGG: G2583_1310 # Name: msyB # Def: acidic protein MsyB # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 124 2 125 125 183 100.0 1e-45 MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQDGDIMWQVEFFADEGEE GECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRAAADE WDER >gi|299857055|gb|ADWS01000009.1| GENE 9 6904 - 7131 311 75 aa, chain - ## HITS:1 COG:ECs1428 KEGG:ns NR:ns ## COG: ECs1428 COG5645 # Protein_GI_number: 15830682 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 146 98.0 8e-36 MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDSAWRYVTILDLPFSLVF DTLLLPIDTHHGPYE >gi|299857055|gb|ADWS01000009.1| GENE 10 7304 - 9817 2314 837 aa, chain - ## HITS:1 COG:ECs1427 KEGG:ns NR:ns ## COG: ECs1427 COG2943 # Protein_GI_number: 15830681 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 837 21 857 857 1677 99.0 0 MPIAASEKAALPKTDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWPDSLADGQLIK DDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLTKEEQESEQKW RTVGTIRRYILLILTLAQTVVATWYMKTILPYQGWALINPMDMVGQDLWVSFMQLLPYML QTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNPEHRTALIMPI CNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWMELIAEVGGEG QIFYRRRRRRVKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAG IIQSSPKASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHC ALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRW CHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFL QPRQLFPVWPQWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLE VLFSVLLAPVRMLFHTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWA VGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRASVGLRTKRWKLFLIPEEYSPPQVLVD TDRFLEMNRQRSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETP EKLNRDRRLVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ >gi|299857055|gb|ADWS01000009.1| GENE 11 9840 - 11393 1554 517 aa, chain - ## HITS:1 COG:mdoG KEGG:ns NR:ns ## COG: mdoG COG3131 # Protein_GI_number: 16129011 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Escherichia coli K12 # 7 517 1 511 511 1032 100.0 0 MKHKLQMMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYETPKSNLPSVFRDM KYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATAVKRIKYSPDYFT FGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLA IDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQS KIYLRDKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNGLSIHAGNGEWIWRPLNNP KHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGEWGKGSVELVEIP TNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQ SNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLV MRVKVKDAKKTTEMRAALVNADQTLSETWSYQLPANE >gi|299857055|gb|ADWS01000009.1| GENE 12 11769 - 12926 662 385 aa, chain + ## HITS:1 COG:no KEGG:SSON_1060 NR:ns ## KEGG: SSON_1060 # Name: mdoC # Def: glucans biosynthesis protein # Organism: S.sonnei # Pathway: not_defined # 1 385 1 385 385 705 100.0 0 MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEPSLWLTLFNDFIHSFRM QVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLLTLPQFIMLQYVKGKAESW PGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRIRNNLENSDKTNKKFSMVKLS VIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTLFYLPFFILGALAFIFPHLKALF TTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETESVITMVLGLWMVNVVFSFGHRLLNF QSARVTYFVNASLFIYLVHHPLTLFFGAYITPHITSNWLGFLCGLIFVVGIAIILYEIHL RIPLLKFLFSGKPVVKRENDKAPAR >gi|299857055|gb|ADWS01000009.1| GENE 13 12934 - 14355 727 473 aa, chain - ## HITS:1 COG:ymdC KEGG:ns NR:ns ## COG: ymdC COG1502 # Protein_GI_number: 16129009 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli K12 # 1 473 21 493 493 946 99.0 0 MPRLASAVLPLCSQHPGQCGLFPLEKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRL LFSALLAAAKRGVRVRLLLDDNNTPGLDDILRLLDSHPRIEVRLFNPFSFRLLRPLGYIT DFSRLNRRMHNKSFTVDGVVTLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVENVADDF ARYWYCKSVSPLQQVLDVPEGEMADRIELPASWHNDAMTHRYLRQMESSPFINHLVDGTL PLIWAKTRLLSDDPAKGEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLL RMVRKGVKIAILTNSLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGI TGNSGASLHAKTFSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQY DAAWQLRLDRWGRINWVDRHAKKEIILKKEPATSFWKRVMVRLASILPVEWLL >gi|299857055|gb|ADWS01000009.1| GENE 14 14357 - 14890 352 177 aa, chain - ## HITS:1 COG:ECs1423 KEGG:ns NR:ns ## COG: ECs1423 COG2110 # Protein_GI_number: 15830677 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Escherichia coli O157:H7 # 1 177 1 177 177 343 99.0 8e-95 MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGDC PTGHAVITLAGALPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPA ISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYDEENAHLYERLLTQQGDE >gi|299857055|gb|ADWS01000009.1| GENE 15 14985 - 15296 223 103 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_2119 NR:ns ## KEGG: ECIAI39_2119 # Name: ymdA # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 103 1 103 103 196 99.0 3e-49 MFRPFLNSLMLGSLFFPFIAIAGSTAQGGVIHFYGQIVEPACDVSTQSSPVEMNCPQNGS VPGKTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEYN >gi|299857055|gb|ADWS01000009.1| GENE 16 15417 - 15749 209 110 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1055 NR:ns ## KEGG: ECS88_1055 # Name: csgC # Def: putative autoagglutination protein # Organism: E.coli_S88 # Pathway: not_defined # 1 110 54 163 163 158 98.0 4e-38 MNALLLLAALSSQITFNTTQQGDVYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEK TLSLPANQPIALTKLSLNISPEDRVKIVVTVSDGQSLHLSQQWPPSSEKS >gi|299857055|gb|ADWS01000009.1| GENE 17 15808 - 16263 397 151 aa, chain - ## HITS:1 COG:no KEGG:B21_01046 NR:ns ## KEGG: B21_01046 # Name: csgA # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 151 1 151 151 187 100.0 1e-46 MKLLKVAAIAAIVFSGSALAGVVPQYGGGGNHGGGGNNSGPNSELNIYQYGGGNSALALQ TDARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSATLDQWNGKNSEMTVKQFGG GNGAAVDQTASNSSVNVTQVGFGNNATAHQY >gi|299857055|gb|ADWS01000009.1| GENE 18 16304 - 16786 299 160 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_1421 NR:ns ## KEGG: ECH74115_1421 # Name: csgB # Def: curlin minor subunit # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 160 1 160 160 223 100.0 1e-57 MYDQVQGDNMKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQ AGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGN TAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR >gi|299857055|gb|ADWS01000009.1| GENE 19 17513 - 18163 229 216 aa, chain + ## HITS:1 COG:ECs1417 KEGG:ns NR:ns ## COG: ECs1417 COG2771 # Protein_GI_number: 15830671 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 408 100.0 1e-114 MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYAMEDQERVVNG LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR >gi|299857055|gb|ADWS01000009.1| GENE 20 18168 - 18557 130 129 aa, chain + ## HITS:1 COG:no KEGG:APECO1_124 NR:ns ## KEGG: APECO1_124 # Name: csgE # Def: curli assembly protein CsgE # Organism: E.coli_APEC # Pathway: not_defined # 1 129 1 129 129 256 100.0 2e-67 MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS TGDLAHDEF >gi|299857055|gb|ADWS01000009.1| GENE 21 18612 - 18998 362 128 aa, chain + ## HITS:1 COG:no KEGG:ECSP_1339 NR:ns ## KEGG: ECSP_1339 # Name: csgF # Def: curli assembly protein CsgF # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 128 11 138 138 205 100.0 4e-52 MLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDN FTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSG LQNNSTDF >gi|299857055|gb|ADWS01000009.1| GENE 22 19025 - 19858 723 277 aa, chain + ## HITS:1 COG:ECs1414 KEGG:ns NR:ns ## COG: ECs1414 COG1462 # Protein_GI_number: 15830668 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in formation of curli polymers # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 550 100.0 1e-156 MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDET GQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV AINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVN VSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES >gi|299857055|gb|ADWS01000009.1| GENE 23 19922 - 20443 555 173 aa, chain - ## HITS:1 COG:no KEGG:SSON_1045 NR:ns ## KEGG: SSON_1045 # Name: ycdZ # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 173 7 179 179 281 100.0 1e-74 MAAFSAIMRGMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGL AISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIG ACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAKTAHREQEIKNKA >gi|299857055|gb|ADWS01000009.1| GENE 24 20515 - 21069 722 184 aa, chain - ## HITS:1 COG:ECs1412 KEGG:ns NR:ns ## COG: ECs1412 COG3381 # Protein_GI_number: 15830666 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli O157:H7 # 1 184 1 184 184 345 99.0 3e-95 MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQDELLTRLQKSCDMAQV SADYNALFIGDECAVPPYRSAWVEDATEAEVRAFLSERGMPLADTPADHIGTLLLAASWL EDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFWRTMAPLTRDAISAMWDELEE DSEE >gi|299857055|gb|ADWS01000009.1| GENE 25 21093 - 21830 726 245 aa, chain - ## HITS:1 COG:ycdX KEGG:ns NR:ns ## COG: ycdX COG1387 # Protein_GI_number: 16128997 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Escherichia coli K12 # 1 245 1 245 245 477 99.0 1e-134 MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWP RVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHEPVFAPHDKATNTQAMIAT IASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNSSFLHSRKGSEDNCRAVAAAV RDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPERILNVSPRRLLNFLESRGMAPIA EFADL >gi|299857055|gb|ADWS01000009.1| GENE 26 21885 - 22823 526 312 aa, chain - ## HITS:1 COG:ycdW KEGG:ns NR:ns ## COG: ycdW COG0111 # Protein_GI_number: 16128996 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli K12 # 1 312 14 325 325 640 100.0 0 MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAV FALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQ QNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAG REELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAAL DSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGE RVCGQVDRARGY >gi|299857055|gb|ADWS01000009.1| GENE 27 23598 - 24284 330 228 aa, chain - ## HITS:1 COG:no KEGG:SSON_1040 NR:ns ## KEGG: SSON_1040 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 228 1 228 228 458 100.0 1e-128 MSFMAFVTCLTIAFIAGFAVARKLTLRKVASSVIIAKSQPVPSSATSPAAKASTRSYIPQ KTYRDSRWQERDELFQGMVAEGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQVSLG RLINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKIVCVIELDDPSHERADRIIRD RWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPVH >gi|299857055|gb|ADWS01000009.1| GENE 28 24864 - 25928 615 354 aa, chain - ## HITS:1 COG:ECs1266 KEGG:ns NR:ns ## COG: ECs1266 COG1702 # Protein_GI_number: 15830520 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Escherichia coli O157:H7 # 1 354 1 354 354 716 100.0 0 MVTSCTGHVLDNQRATTRGVFSSGSHLVTLHFQPHPFFSCVTDAVNGARSRFSAFYPKAN YGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVIKARREAKRVLRRDSRSHKQR EEESVTSLVQMGGVEAIGMARDSRDTSPILARNEAQLHYLKAIESKQLIFATGEAGCGKT WISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGA SFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIV NGDITQCDLPRGVCSGLSDALERFEEDEMVGIVRFGKEDCVRSALCQRTLHAYS >gi|299857055|gb|ADWS01000009.1| GENE 29 26191 - 27462 1132 423 aa, chain - ## HITS:1 COG:ycdB KEGG:ns NR:ns ## COG: ycdB COG2837 # Protein_GI_number: 16128983 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Escherichia coli K12 # 1 423 1 423 423 860 99.0 0 MQYKDENGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGTLSPDARNEKQPFYGEH QAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDS GILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQ ICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP DSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQT GAPLGMQHEHDVPDYASDPEGKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSG QLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDANDYLGSAL LRV >gi|299857055|gb|ADWS01000009.1| GENE 30 27468 - 28595 1543 375 aa, chain - ## HITS:1 COG:ycdO KEGG:ns NR:ns ## COG: ycdO COG2822 # Protein_GI_number: 16128982 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Escherichia coli K12 # 1 375 1 375 375 706 100.0 0 MTINFRRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPMTITVNAGKTQFIIQNH SQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMTCGLLTNPKGKLIVKGEAT ADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDAIKAGDIEKAKALYAPTRQHY ERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHRLEKALFGDNTTKGMDQYAEQLY TDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKISGEEDRYSHTDLWDFQANVEGSQK IVDLLRPQLQKANPELLAKVDANFKKVDTILAKYRTKDGFETYDKLTDADRNALKGPITA LAEDLAQLRGVLGLD >gi|299857055|gb|ADWS01000009.1| GENE 31 28653 - 29483 919 276 aa, chain - ## HITS:1 COG:ECs1263 KEGG:ns NR:ns ## COG: ECs1263 COG0672 # Protein_GI_number: 15830517 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Escherichia coli O157:H7 # 1 276 1 276 276 455 100.0 1e-128 MFVPFLIMLREGLEAALIVSLIASYLKRTQRGRWIGVMWIGVLLAAALCLGLGIFINETT GEFPQKEQELFEGIVAVIAVVILTWMVFWMRKVSRNVKVQLEQAVDSALQRGNHHGWALV MMVFFAVAREGLESVFFLLAAFQQDVGIWPPLGAMLGLATAVVLGFLLYWGGIRLNLGAF FKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQEIAFDMSAVLSTHSLFGTLMEGIFGYQ EAPSVSEVAVWFIYLIPALVAFALPPRAGATASRSA >gi|299857055|gb|ADWS01000009.1| GENE 32 30025 - 31533 1730 502 aa, chain - ## HITS:1 COG:putP KEGG:ns NR:ns ## COG: putP COG0591 # Protein_GI_number: 16128981 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Escherichia coli K12 # 1 502 1 502 502 888 99.0 0 MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWL LMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFED KSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGF LAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENVDMLKGLNFVAIIS LMGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNEHP AEAGAVNQNAERVFIELAQILFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKA FLRKHASQKELVWVGRVMVLVVALVAIALAANPENRVLGLVSYAWAGFGAAFGPVVLFSV MWSRMTRNGALAGMIIGALTVIVWKQFGWLGLYEIIPGFIFGSIGIVVFSLLGKAPSAAM QKRFAEADAHYHSAPPSRLQES >gi|299857055|gb|ADWS01000009.1| GENE 33 31692 - 31901 131 69 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_2110 NR:ns ## KEGG: EcSMS35_2110 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 69 1 69 69 101 100.0 1e-20 MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECN LMKNSVAEH >gi|299857055|gb|ADWS01000009.1| GENE 34 31956 - 35918 4576 1320 aa, chain + ## HITS:1 COG:ZputA_2 KEGG:ns NR:ns ## COG: ZputA_2 COG4230 # Protein_GI_number: 15801003 # Func_class: C Energy production and conversion # Function: Delta 1-pyrroline-5-carboxylate dehydrogenase # Organism: Escherichia coli O157:H7 EDL933 # 526 1320 1 795 795 1532 99.0 0 MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGA ANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPV AEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKAT RDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEAILSRSLNRIIGKSG EPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAY MVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLA RQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDL ATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLI YPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIY APVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGL PHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEM SPVINPAEPKDIVGFVREATPREVEQALESAVNNAPIWFATPPVERAAILHRAAVLMESQ MQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNF PLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGA QLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQ VVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVI DSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVF GPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVG AVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALT QPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDE QDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHG DSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG >gi|299857055|gb|ADWS01000009.1| GENE 35 35958 - 36596 637 212 aa, chain - ## HITS:1 COG:ycdC KEGG:ns NR:ns ## COG: ycdC COG1309 # Protein_GI_number: 16128979 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 212 1 212 212 412 99.0 1e-115 MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV EAVTGATLRDEIFFNQTVENVQRIIIEGIRPR >gi|299857055|gb|ADWS01000009.1| GENE 36 36884 - 37975 988 363 aa, chain + ## HITS:1 COG:ECs1258 KEGG:ns NR:ns ## COG: ECs1258 COG2141 # Protein_GI_number: 15830512 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 363 20 382 382 744 99.0 0 MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEF WDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGW QKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSV PMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVL FMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNIN MGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQ EVA >gi|299857055|gb|ADWS01000009.1| GENE 37 37975 - 38667 697 230 aa, chain + ## HITS:1 COG:ycdL KEGG:ns NR:ns ## COG: ycdL COG1335 # Protein_GI_number: 16128977 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli K12 # 1 230 15 244 244 465 99.0 1e-131 MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAA RAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVD ELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYF GVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFARIA >gi|299857055|gb|ADWS01000009.1| GENE 38 38679 - 39065 414 128 aa, chain + ## HITS:1 COG:ycdK KEGG:ns NR:ns ## COG: ycdK COG0251 # Protein_GI_number: 16128976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 128 1 128 128 250 100.0 4e-67 MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIR KVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEI ATIAHIAK >gi|299857055|gb|ADWS01000009.1| GENE 39 39073 - 39873 679 266 aa, chain + ## HITS:1 COG:ycdJ KEGG:ns NR:ns ## COG: ycdJ COG0596 # Protein_GI_number: 16128975 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 266 1 266 266 496 98.0 1e-140 MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAED YSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAH TRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLR RLNALKRADFSHHADRICCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACN VTDPETFNALLLNGLASLLHHREAAL >gi|299857055|gb|ADWS01000009.1| GENE 40 39883 - 40473 444 196 aa, chain + ## HITS:1 COG:ECs1254 KEGG:ns NR:ns ## COG: ECs1254 COG0778 # Protein_GI_number: 15830508 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 386 98.0 1e-107 MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTA EGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEET AFRNSSMQAAYLIVACRALGLDTGPMSGFDRQHVDDAFFAGSTLKSNLLINIGYGDRSKL FARLPRLSFEEACGLL >gi|299857055|gb|ADWS01000009.1| GENE 41 40484 - 40978 288 164 aa, chain + ## HITS:1 COG:ycdH KEGG:ns NR:ns ## COG: ycdH COG1853 # Protein_GI_number: 16128973 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli K12 # 13 164 1 152 152 307 99.0 5e-84 MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVW PVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCR ISQVVSVGTHDILFCAIEAIHRHTTPYGLVWFDRSYHALMRPAC >gi|299857055|gb|ADWS01000009.1| GENE 42 40999 - 42327 724 442 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 24 428 8 421 447 283 37 3e-75 MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNL SILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACG LVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTV LCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNLLGLGKAVDFTLVSHAAWFGLPHFS TPAFNSQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVG GSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVV FGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAIL LNALLSRKLVDVPPPEVVHQEP >gi|299857055|gb|ADWS01000009.1| GENE 43 42410 - 42583 94 57 aa, chain - ## HITS:1 COG:STM1121 KEGG:ns NR:ns ## COG: STM1121 COG3729 # Protein_GI_number: 16764478 # Func_class: R General function prediction only # Function: General stress protein # Organism: Salmonella typhimurium LT2 # 1 55 1 55 55 59 92.0 1e-09 MANHRGGSGNFAEDRERASEAGKKGGQHSGGNFKNDPQRASEAGKKGGKSSHGKSDN >gi|299857055|gb|ADWS01000009.1| GENE 44 42956 - 43552 691 198 aa, chain + ## HITS:1 COG:wrbA KEGG:ns NR:ns ## COG: wrbA COG0655 # Protein_GI_number: 16128970 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Escherichia coli K12 # 1 198 1 198 198 349 100.0 2e-96 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPV ATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQ EQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELS IARYQGEYVAGLAVKLNG >gi|299857055|gb|ADWS01000009.1| GENE 45 43573 - 43800 379 75 aa, chain + ## HITS:1 COG:no KEGG:LF82_2690 NR:ns ## KEGG: LF82_2690 # Name: yccJ # Def: uncharacterized protein YccJ # Organism: E.coli_LF82 # Pathway: not_defined # 1 75 1 75 75 125 100.0 6e-28 MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDK DSLFWGEQTIERKNV >gi|299857055|gb|ADWS01000009.1| GENE 46 43838 - 45079 1474 413 aa, chain - ## HITS:1 COG:no KEGG:ECO111_1113 NR:ns ## KEGG: ECO111_1113 # Name: agp # Def: glucose-1-phosphatase/inositol phosphatase # Organism: E.coli_O111_H- # Pathway: Glycolysis / Gluconeogenesis [PATH:eoi00010] # 1 413 1 413 413 832 100.0 0 MNKTLIAATVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNK WPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGMVKSGECPPPDTVYAYANSLQRTVAT AQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDS YQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYY EGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRT SAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIE YVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDSVLNEAVK >gi|299857055|gb|ADWS01000009.1| GENE 47 45371 - 46630 312 419 aa, chain - ## HITS:1 COG:no KEGG:ECO26_1556 NR:ns ## KEGG: ECO26_1556 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 419 1 419 419 825 99.0 0 MSSNIHGISCTANNYLKQAWNNIKNEHEKNQKYSITLFENTLVCFMRLYKEIRRQKAEDY IPCLECDSLEKEFEEMQNDNDLSLFLRTLRTNDTETYSGVSEGITYTIQYVRDIDIVRVS LPGRGSESITDFKGYYWYGFMEYIENINACDDVFSEYCLDDENMSIQPEWINTPGISDLD TGIDLSGISFILSEINKTYGLKYAPVDGDGYCLLRAILVLKEHEYSWALGSHKTQKQVYE EFIKIVDKQTIEALVDTAFNDLREDVKTLFGVNLQSDNKIQGQGGFLSWSFLSFKKEFID SCLNDKKCILHLPEFIFNDNKARLVLDTDPEQKVNEVKNFLTALSDSICSLFIVNSNVAS ISLGNESFSTDDDLEYGYLINTGNHYDVYLPPELFAQAYELNNKERNAQIDFLTRYAIY >gi|299857055|gb|ADWS01000009.1| GENE 48 46890 - 47810 1025 306 aa, chain + ## HITS:1 COG:cbpA KEGG:ns NR:ns ## COG: cbpA COG2214 # Protein_GI_number: 16128966 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Escherichia coli K12 # 1 306 1 306 306 609 99.0 1e-174 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQ RRAEYDQMWQHRNDPQFNRQFHHSDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDI EIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQG TPGENGGPNGDLWLVIHIAPHPLFDIVGHDLEIVVPVSPWEAALGAKVTVPTLKESILLT IPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPR KDWGKA >gi|299857055|gb|ADWS01000009.1| GENE 49 47810 - 48115 359 101 aa, chain + ## HITS:1 COG:no KEGG:ECB_01002 NR:ns ## KEGG: ECB_01002 # Name: yccD # Def: modulator of CbpA co-chaperone # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 101 1 101 101 189 100.0 2e-47 MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLR HELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP >gi|299857055|gb|ADWS01000009.1| GENE 50 48208 - 48807 591 199 aa, chain - ## HITS:1 COG:torD KEGG:ns NR:ns ## COG: torD COG3381 # Protein_GI_number: 16128964 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli K12 # 1 199 1 199 199 365 97.0 1e-101 MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNELENC IATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFN EPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVVRCRQYDSFGF YAALSQLLLVLVESDHQNR >gi|299857055|gb|ADWS01000009.1| GENE 51 48804 - 51350 2619 848 aa, chain - ## HITS:1 COG:torA KEGG:ns NR:ns ## COG: torA COG0243 # Protein_GI_number: 16128963 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 848 1 848 848 1741 99.0 0 MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATDAVISKEGILTGSHWG AIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQ RGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALH GNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW WCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLA LAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAESIRGLAR QMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRK GVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMC IFVGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYG NHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQ GKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIAD MNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK EPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGE PGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGAVEQVTAFNGPVEMVAQCEY VPASQVKS >gi|299857055|gb|ADWS01000009.1| GENE 52 51350 - 52522 1030 390 aa, chain - ## HITS:1 COG:torC KEGG:ns NR:ns ## COG: torC COG3005 # Protein_GI_number: 16128962 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Escherichia coli K12 # 1 390 1 390 390 801 100.0 0 MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEE YKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRA ELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQ LPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDG DWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQ ATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLD KREERTLLKYLQMNASDTAGKAHGDKKEEK >gi|299857055|gb|ADWS01000009.1| GENE 53 52652 - 53344 747 230 aa, chain + ## HITS:1 COG:ECs1150 KEGG:ns NR:ns ## COG: ECs1150 COG0745 # Protein_GI_number: 15830404 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 439 99.0 1e-123 MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDEN GLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRI DLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRE RLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC >gi|299857055|gb|ADWS01000009.1| GENE 54 53317 - 54345 652 342 aa, chain - ## HITS:1 COG:torT KEGG:ns NR:ns ## COG: torT COG1879 # Protein_GI_number: 16128960 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 342 1 342 342 629 98.0 1e-180 MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRAWKLCALYPSLKDSYWL SLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQK QVANLPVIELVNALDDPLVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGG SKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSD NVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK >gi|299857055|gb|ADWS01000009.1| GENE 55 54458 - 57172 2429 904 aa, chain + ## HITS:1 COG:torS_1 KEGG:ns NR:ns ## COG: torS_1 COG0642 # Protein_GI_number: 16128959 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 650 1 650 650 1128 99.0 0 MGFALMALLTLTSTLVGWYNLRFISQVEKDNTQALIPTMNMARQLSEASAWELFAAQNLT SADNEKMWQAQGRMLTAQSLKINALLQALREQGFDTTAIEQQEQEISRSLRQQGELVGRR LQLRQQQRQLSQQIVAAADEIARLAQGQANNATTSAGATQAGIYDLIEQDQRQAAESALD RLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIRI EDPGVRAQVATTLTTVSQYSDLLALYQQDSEISTHLQTLAQNNIAQFAQFSSEVSQLVDT IELRNQHGLAHLEKASARGQYSLLLLGIVSLCALILILWRVVYRSVTRPLAEQTQALQRL LDGDIDSPFPETAGVRELDTIGRLMDAFRSNVHALNRHREQLAAQVKARTAELQELVIEH RQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGE SLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADD MPCALMGDPRRIRQVITNLLSNALRFTDEGYIILRSRTDGEQWLVEVEDSGCGIDPAKLA EIFQPFVQVSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVP KTVNQAVRLDGLRLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAA LVDFDLPDVDGITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVL GQLLAHYLQLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQ DSEKIKRAAHQLKSSCSSLGMRIASQLCAQLEQQPLSAPLPHEEITCSVAALEAWLHKKD LNAI >gi|299857055|gb|ADWS01000009.1| GENE 56 57244 - 58317 622 357 aa, chain + ## HITS:1 COG:yccM KEGG:ns NR:ns ## COG: yccM COG0348 # Protein_GI_number: 16128958 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Escherichia coli K12 # 1 357 1 357 357 700 99.0 0 MAENKRTRWQRRPGTTGGKLPWNDWRNATTWRKATQLLLLAMNIYIAITFWYWVRYYETA SSTTFVARPGGIEGWLPIAGLMNLKYSLVTGQLPSVHAAAMLLLVAFIVISLLLKKAFCS WLCPVGTLSELIGDLGNKLFGRQCVLPRWLDIPLRGVKYLLLSFFLYIALLMPAQAIHYF MLSPYSVVMDVKMLDFFRHMGTATLISVTVLLIASLFIRHAWCRYLCPYGALMGVVSLLS PFKIRRNAESCIDCGKCAKNCPSRIPVDKLIQVRTVECTGCMTCVESCPVASTLTFSLQK PAANKKAFALSGWLMTLLVLGIMFAVIGYAMYAGVWQSPVPDELYRRLIPQAPMIGH >gi|299857055|gb|ADWS01000009.1| GENE 57 58365 - 58538 256 57 aa, chain - ## HITS:1 COG:no KEGG:ECB_00994 NR:ns ## KEGG: ECB_00994 # Name: gnsA # Def: predicted regulator of phosphatidylethanolamine synthesis # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 57 1 57 57 75 100.0 4e-13 MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKMTGLESYDVKIKIM >gi|299857055|gb|ADWS01000009.1| GENE 58 58932 - 59144 303 70 aa, chain - ## HITS:1 COG:ECs1145 KEGG:ns NR:ns ## COG: ECs1145 COG1278 # Protein_GI_number: 15830399 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 133 100.0 9e-32 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR GPAAANVVTL >gi|299857055|gb|ADWS01000009.1| GENE 59 59430 - 59642 203 70 aa, chain + ## HITS:1 COG:ECs1144 KEGG:ns NR:ns ## COG: ECs1144 COG1278 # Protein_GI_number: 15830398 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 137 100.0 5e-33 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR GPTAANVYLS >gi|299857055|gb|ADWS01000009.1| GENE 60 60084 - 60389 171 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAV GTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR >gi|299857055|gb|ADWS01000009.1| GENE 61 60562 - 61140 353 192 aa, chain + ## HITS:1 COG:no KEGG:B21_00996 NR:ns ## KEGG: B21_00996 # Name: ymcC # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 192 23 214 214 375 100.0 1e-103 MVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNA MLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLS STFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGV IPVEMTFLKPAP >gi|299857055|gb|ADWS01000009.1| GENE 62 61182 - 61883 437 233 aa, chain + ## HITS:1 COG:no KEGG:SSON_0992 NR:ns ## KEGG: SSON_0992 # Name: ymcB # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 233 16 248 248 444 100.0 1e-123 MTPHAFAQGTVTIYLPGEQQTLSVGPMENVVQLVTQPQLRDRLWWPGALLTDSAAKAKAL KDYQHVMAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPL VGDYTLYTVQRPVTITLLGAVSGAGQLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEG ETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPD >gi|299857055|gb|ADWS01000009.1| GENE 63 61883 - 63979 1760 698 aa, chain + ## HITS:1 COG:no KEGG:ECO111_1095 NR:ns ## KEGG: ECO111_1095 # Name: ymcA # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 698 1 698 698 1417 100.0 0 MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQMPNARIAPEGEFSVNY RDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGDQSYKDKSFDFKLRLWEEG YWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMAWGYAGNAGNITNPFCRVSDK YCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPLRLKLEYDGNNYQNDFAGKLPQA SHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTNFNDLRPALRDTPKPAYQPAPESEG LQYTTVANQLTALKYNAGFEAPEIQLRDKTLYMSGQQYKYRDSREAVDRANRILVNNLPQ GVEKISVTQKREHMAMVTTETDVASLRKQLAGTAPGQSEQLQQQRVEAEDLSAFGRGYRI REDRFSYSFNPTLSQSLGGPEDFYMFQLGLMSSARYWFTDHLLLDGGIFTNIYNNYDKFK SSLLPADSTLPRVRTHIRDYVRNDVYLNNLQANYFADLGNGFYGQVYGGYLETMYAGVGS ELLYRPLDASWALGVDVNYVKQRDWDNMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVG QYLAKDKGATIDVAKRFDSGVAVGVWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPN RNRAVVSWTPLTRDGGQMLSRKYQLYPMTAEREVPVGQ >gi|299857055|gb|ADWS01000009.1| GENE 64 64025 - 65164 851 379 aa, chain + ## HITS:1 COG:ECs1139 KEGG:ns NR:ns ## COG: ECs1139 COG1596 # Protein_GI_number: 15830393 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Escherichia coli O157:H7 # 1 379 1 379 379 744 100.0 0 MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLI DQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWV NADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQVDVSVAAFRSQKAYVTGEVS KSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKL LHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFV IRATQNKQNGKIANIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPT ISGVHDLTETSRWIQTWPN >gi|299857055|gb|ADWS01000009.1| GENE 65 65152 - 65598 488 148 aa, chain + ## HITS:1 COG:ECs1138 KEGG:ns NR:ns ## COG: ECs1138 COG0394 # Protein_GI_number: 15830392 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Escherichia coli O157:H7 # 1 148 5 152 152 276 100.0 1e-74 MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVKHPADATAADVAANH GVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVRGKTMLFGQWLEQKEIPDP YRKSQDAFEHVYGMLERASQEWAKRLSR >gi|299857055|gb|ADWS01000009.1| GENE 66 65618 - 67798 2265 726 aa, chain + ## HITS:1 COG:yccC_1 KEGG:ns NR:ns ## COG: yccC_1 COG3206 # Protein_GI_number: 16128947 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Escherichia coli K12 # 1 480 1 480 480 892 100.0 0 MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLIAVAYSLLSTPIYQADT LVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGKTIAELNLRDIVEQKYFPI VGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGENGHYTLEGEEFTVNGMVGQRL EKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETFTVSERSKESGMLELTMTGDDPQ LITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQLPEVRSELDQAEEKLNVYRQQRDSV DLNLEAKAVLEQIVNVDNQLNELTFREAEISQLYKKDHPTYRALLEKRQTLEQERKRLNK RVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNRQQELSISKSSAIGNVRIIDPAVTQPQPV KPKKALNVVLGFILGLFISVGAVLARAMLRRGVEAPEQLEEHGISVYATIPMSEWLDKRT RLRKKNLFSNQQRHRTKNIPFLAVDNPADSAVEAVRALRTSLHFAMMETENNILMITGAT PDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKV IQHFGKGGFDVITRGQVPPNPSELLMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVV GRSVGTSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGY SYSEKE >gi|299857055|gb|ADWS01000009.1| GENE 67 67913 - 69211 712 432 aa, chain - ## HITS:1 COG:no KEGG:B21_00990 NR:ns ## KEGG: B21_00990 # Name: appA # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: gamma-Hexachlorocyclohexane degradation [PATH:ebl00361]; Inositol phosphate metabolism [PATH:ebl00562]; Riboflavin metabolism [PATH:ebl00740] # 1 432 1 432 432 843 100.0 0 MKAILIPFLSLLIPLTPQSAFAQSEPELKLESVVIVSRHGVRAPTKATQLMQDVTPDAWP TWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQSGQVAIIADVDERTRKTGE AFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGH RQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLT EIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIMAA LTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGGALELNWTLPGQPDNTPPGGELVFERW RRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQ IVNEARIPACSL >gi|299857055|gb|ADWS01000009.1| GENE 68 69291 - 69383 62 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWYLLWFVGILLMCSLSTLVLVWLDPRLKS >gi|299857055|gb|ADWS01000009.1| GENE 69 69396 - 70532 1078 378 aa, chain - ## HITS:1 COG:appB KEGG:ns NR:ns ## COG: appB COG1294 # Protein_GI_number: 16128945 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Escherichia coli K12 # 1 378 1 378 378 666 100.0 0 MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDDERRIVINSVGAHWEGN QVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPLAFDYRGKIADARWRKMWD AGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGSFWQLLTPFPLLCGLLSLGMV ILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLAGYWLWVGIDGFVLLAQDANGPS NPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPLLTVMAIYRGRPGWGFLMASLMQFG VIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQLTLSIMLVIVLIFLPIVLLYTLWSYYK MWGRMTTETLRRNENELY >gi|299857055|gb|ADWS01000009.1| GENE 70 70544 - 72088 1580 514 aa, chain - ## HITS:1 COG:ECs1134 KEGG:ns NR:ns ## COG: ECs1134 COG1271 # Protein_GI_number: 15830388 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 965 99.0 0 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALRSFAIGSVFGTLAIIGTLQLGDS SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFAIKIPALLGILATHSL DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRELEGDLGYGMLLSRY APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG >gi|299857055|gb|ADWS01000009.1| GENE 71 72222 - 73079 672 285 aa, chain - ## HITS:1 COG:no KEGG:B21_00987 NR:ns ## KEGG: B21_00987 # Name: hyaF # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 285 1 285 285 556 100.0 1e-157 MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCAHSPQVIALLNELQHQL SERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQADDSESEIQEAIFCGLWRV RRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPPIDGLMNGLPLAHELLAHVRN PDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIGYGESYINATGLRHVWHLRCTDT LKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVCQWLAEAAPT >gi|299857055|gb|ADWS01000009.1| GENE 72 73076 - 73474 454 132 aa, chain - ## HITS:1 COG:no KEGG:ECO111_1087 NR:ns ## KEGG: ECO111_1087 # Name: hyaE # Def: hydrogenase-1 operon protein HyaE # Organism: E.coli_O111_H- # Pathway: not_defined # 1 132 1 132 132 259 100.0 2e-68 MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVLLLSSDPKRTPEVSDNPVMIGE LLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGNYRGVLNGIHPWAELINLM RGLVEPQQERAS >gi|299857055|gb|ADWS01000009.1| GENE 73 73471 - 74058 694 195 aa, chain - ## HITS:1 COG:hyaD KEGG:ns NR:ns ## COG: hyaD COG0680 # Protein_GI_number: 16128941 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 195 1 195 195 359 98.0 2e-99 MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDGGTQGLNLLGYVESASH LLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSEVLALADIRGHLPAHIALV GLQPAMLDDYGGSLSELARDQLPAAEQSALAQLAAWGIVPQPANESRCLNYDCLSMENYE GVRLRQYRMTQEEQG >gi|299857055|gb|ADWS01000009.1| GENE 74 74055 - 74762 723 235 aa, chain - ## HITS:1 COG:ECs1130 KEGG:ns NR:ns ## COG: ECs1130 COG1969 # Protein_GI_number: 15830384 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I cytochrome b subunit # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 433 100.0 1e-121 MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIR LIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPS ADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDI HSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS >gi|299857055|gb|ADWS01000009.1| GENE 75 74781 - 76574 1891 597 aa, chain - ## HITS:1 COG:hyaB KEGG:ns NR:ns ## COG: hyaB COG0374 # Protein_GI_number: 16128939 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I large subunit # Organism: Escherichia coli K12 # 1 597 1 597 597 1276 100.0 0 MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIIL QGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHL VHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSPGYFFDVQNRLKKFVEGGQLG IFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVFGGKNPHPNWIVGGMPCA INIDESGAVGAVNMERLNLVQSIITRTADFINNVMIPDALAIGQFNKPWSEIGTGLSDKC VLSYGAFPDIANDFGEKSLLMPGGAVINGDFNNVLPVDLVDPQQVQEFVDHAWYRYPNDQ VGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQERYSWIKAPRWRGNAMEVGPLARTLIAY HKGDAATVESVDRMMSALNLPLSGIQSTLGRILCRAHEAQWAAGKLQYFFDKLMTNLKNG NLATASTEKWEPATWPTECRGVGFTEAPRGALGHWAAIRDGKIDLYQCVVPTTWNASPRD PKGQIGAYEAALMNTKMAIPEQPLEILRTLHSFDPCLACSTHVLGDDGSELISVQVR >gi|299857055|gb|ADWS01000009.1| GENE 76 76571 - 77689 733 372 aa, chain - ## HITS:1 COG:hyaA KEGG:ns NR:ns ## COG: hyaA COG1740 # Protein_GI_number: 16128938 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I small subunit # Organism: Escherichia coli K12 # 1 372 1 372 372 738 100.0 0 MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAWALENKPRIPVVWIHGL ECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAEEVFEDIITQYNGKYILAV EGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTCASWGCVQAARPNPTQATPID KVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVDRMGRPLMFYGQRIHDKCYRRAH FDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACSSTRWNDGVSFPIQSGHGCLGCAEN GFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGVVAAAVGVHAVASAVDQRRRHNQQPTE TEHQPGNEDKQA >gi|299857055|gb|ADWS01000009.1| GENE 77 78410 - 79069 764 219 aa, chain + ## HITS:1 COG:yccA KEGG:ns NR:ns ## COG: yccA COG0670 # Protein_GI_number: 16128937 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 219 1 219 219 330 100.0 8e-91 MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMY GLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCC SAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFET SNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD >gi|299857055|gb|ADWS01000009.1| GENE 78 79160 - 79489 537 109 aa, chain + ## HITS:1 COG:ECs1053 KEGG:ns NR:ns ## COG: ECs1053 COG2920 # Protein_GI_number: 15830307 # Func_class: P Inorganic ion transport and metabolism # Function: Dissimilatory sulfite reductase (desulfoviridin), gamma subunit # Organism: Escherichia coli O157:H7 # 1 109 20 128 128 219 100.0 1e-57 MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHWEVVRFVRDFYLEFNTS PAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI >gi|299857055|gb|ADWS01000009.1| GENE 79 79486 - 79764 386 92 aa, chain - ## HITS:1 COG:ECs1052 KEGG:ns NR:ns ## COG: ECs1052 COG1254 # Protein_GI_number: 15830306 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Escherichia coli O157:H7 # 1 92 1 92 92 181 97.0 2e-46 MSKVCIIAWVYGRVQGVGFRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQ WLKSGGPRSARVERVLSEPHHPSGELADFRIR >gi|299857055|gb|ADWS01000009.1| GENE 80 79859 - 81049 582 396 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 22 389 21 386 396 228 32 1e-58 MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQ IRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRF GNFLVLQLLSAGAEYQRAALISALQTLYPECAIYDRSDVAVRKKEGMELTQGLVTGELPP ALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALM GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDA GRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM >gi|299857055|gb|ADWS01000009.1| GENE 81 81107 - 81424 404 105 aa, chain + ## HITS:1 COG:ECs1050 KEGG:ns NR:ns ## COG: ECs1050 COG3785 # Protein_GI_number: 15830304 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 105 18 122 122 200 100.0 6e-52 MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDN GLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPRLRN >gi|299857055|gb|ADWS01000009.1| GENE 82 81469 - 81882 620 137 aa, chain - ## HITS:1 COG:yccU KEGG:ns NR:ns ## COG: yccU COG1832 # Protein_GI_number: 16128932 # Func_class: R General function prediction only # Function: Predicted CoA-binding protein # Organism: Escherichia coli K12 # 1 137 28 164 164 268 99.0 3e-72 MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQG YGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQLGVINEQAAVLARDAGLNV VMDRCPAIEIPRLGLAK >gi|299857055|gb|ADWS01000009.1| GENE 83 81857 - 82015 78 52 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_2154 NR:ns ## KEGG: EcSMS35_2154 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 52 5 56 56 79 100.0 3e-14 MPAISVSFIISSRLFNKVYDKADMPTMQLIRMNESKSGKYVYMLVSMIKEKF >gi|299857055|gb|ADWS01000009.1| GENE 84 82055 - 82717 607 220 aa, chain + ## HITS:1 COG:ECs1048 KEGG:ns NR:ns ## COG: ECs1048 COG3110 # Protein_GI_number: 15830302 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 220 1 220 220 409 100.0 1e-114 MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLV FRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLD GDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASLPQFATMMADDSTLLSGVSEL DAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS >gi|299857055|gb|ADWS01000009.1| GENE 85 82804 - 83271 401 155 aa, chain + ## HITS:1 COG:ECs1047 KEGG:ns NR:ns ## COG: ECs1047 COG1803 # Protein_GI_number: 15830301 # Func_class: G Carbohydrate transport and metabolism # Function: Methylglyoxal synthase # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 313 100.0 9e-86 MYIMELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGTTGNLISRATG MNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVA TNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK >gi|299857055|gb|ADWS01000009.1| GENE 86 83303 - 85375 1523 690 aa, chain - ## HITS:1 COG:helD KEGG:ns NR:ns ## COG: helD COG0210 # Protein_GI_number: 16128929 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli K12 # 7 690 1 684 684 1340 99.0 0 MWIYRVMELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVW GELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRT GENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHN QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL ARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVS KLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLAS RLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL IHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYR FSGAQMSLTTAFHENFGEGDRCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD EKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI HASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRAR HRVWALFNKENPSPFVEILKNLDVPVARKP >gi|299857055|gb|ADWS01000009.1| GENE 87 85480 - 85926 494 148 aa, chain + ## HITS:1 COG:yccF KEGG:ns NR:ns ## COG: yccF COG3304 # Protein_GI_number: 16128928 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 134 1 134 148 239 100.0 2e-63 MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEITKLSLVPYGNEAIHVD ELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQCISIIGIPVGIANFKIAAI ALWPVGRRVVSVETAQAAREANARRRFE >gi|299857055|gb|ADWS01000009.1| GENE 88 85936 - 88098 1908 720 aa, chain + ## HITS:1 COG:ECs1044 KEGG:ns NR:ns ## COG: ECs1044 COG1289 # Protein_GI_number: 15830298 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 720 1 720 720 1425 99.0 0 MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLTIPLTLGMVAAALTDLD DRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLSTSGFILLGGLGQRYATIAF GALLIAIYTMLGTSLYEHWYQQPIYLLAGAVWYNVLTLIGHLLFPVRPLQDNLARCYEQL ARYLELKSRMFDPDIEDESQAPLYDLALANGQLMATLNQTKLSLLTRLRGDRGQRGTRRT LHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFRFQRLMSMQGQACQQLSRCILLRQP YQHDPHFERAFTHIDAALERMRDNGAPADLLKTLGFLLNNLRAIDAQLATIESEQAQALP HNNDENELADDSPHGLSDIWLRLSRHFTPESALFRHAVRMSLVLCFGYAIIQITGMHHGY WILLTSLFVCQPNYNATRHRLKLRIIGTLVGIAIGIPVLWFVPSLEGQLVLLVITGVLFF AFRNVQYAHATMFITLLVLLCFNLLGEGFEVALPRVIDTLIGCAIAWAAVSYIWPDWQFR NLPRMLERATEANCRYLDAILEQYHQGRDNRLAYRIARRDAHNRDAELASVVSNMSSEPN VTPQIREAAFRLLCLNHTFTSYISALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADE ERVNEALASLKQRMQQLEPRADSKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA >gi|299857055|gb|ADWS01000009.1| GENE 89 88061 - 88690 504 209 aa, chain - ## HITS:1 COG:yccR KEGG:ns NR:ns ## COG: yccR COG3070 # Protein_GI_number: 16128926 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Escherichia coli K12 # 1 209 1 209 209 407 100.0 1e-114 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE AALPVARRQELAEWADSLTPKQEFPAELE >gi|299857055|gb|ADWS01000009.1| GENE 90 88909 - 89418 269 169 aa, chain + ## HITS:1 COG:ECs1042 KEGG:ns NR:ns ## COG: ECs1042 COG5404 # Protein_GI_number: 15830296 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: SOS-response cell division inhibitor, blocks FtsZ ring formation # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 269 100.0 2e-72 MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPMMTQLLLLPLLQQLGQQ SRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVESMVRALRTGNYSVVIGWLA DDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSGLKIHSNLYH >gi|299857055|gb|ADWS01000009.1| GENE 91 89775 - 90827 1204 350 aa, chain + ## HITS:1 COG:STM1070 KEGG:ns NR:ns ## COG: STM1070 COG2885 # Protein_GI_number: 16764429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Salmonella typhimurium LT2 # 1 350 1 350 350 635 95.0 0 MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFIPNNGPTHENQLGAGA FGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDVYTRLGG MVWRADTKANVPGGASFKDHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDANTIGT RPDNGLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQA ALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKIS ARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA >gi|299857055|gb|ADWS01000009.1| GENE 92 90903 - 91355 483 150 aa, chain - ## HITS:1 COG:ECs1040 KEGG:ns NR:ns ## COG: ECs1040 COG3120 # Protein_GI_number: 15830294 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 253 100.0 9e-68 MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNGWIDK HMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIV QLIEDAENKEKYANKMSSLKQDLQALLGKE >gi|299857055|gb|ADWS01000009.1| GENE 93 91541 - 93301 1482 586 aa, chain + ## HITS:1 COG:ECs1039 KEGG:ns NR:ns ## COG: ECs1039 COG1067 # Protein_GI_number: 15830293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent protease # Organism: Escherichia coli O157:H7 # 1 586 1 586 586 1167 100.0 0 MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFML AKAPEESEYLNLIANAARTLQSDAGQLVGGHYEVSGHSIRLRHAVSADDNFATLTQVVAA DWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRTLLAQPLLWMRLKNIVNRERF DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD AESVTQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVA SLCDGDTFSGEQLNLMLQQREWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEF PGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP FSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE KIEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLL LNLVWDGEGQTTLMQTIQERIAQASQQEGRHRFPWPLRWLNWFIPN >gi|299857055|gb|ADWS01000009.1| GENE 94 93370 - 93888 730 172 aa, chain + ## HITS:1 COG:ECs1038 KEGG:ns NR:ns ## COG: ECs1038 COG0764 # Protein_GI_number: 15830292 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 344 100.0 4e-95 MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELD INPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLP TAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDLKVGLFQDTSAF >gi|299857055|gb|ADWS01000009.1| GENE 95 93958 - 94125 89 55 aa, chain - ## HITS:1 COG:ECs1037 KEGG:ns NR:ns ## COG: ECs1037 COG3130 # Protein_GI_number: 15830291 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome modulation factor # Organism: Escherichia coli O157:H7 # 1 55 1 55 55 80 100.0 5e-16 MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGWREAMADRVVMA >gi|299857055|gb|ADWS01000009.1| GENE 96 94381 - 94944 633 187 aa, chain - ## HITS:1 COG:ymbA KEGG:ns NR:ns ## COG: ymbA COG3009 # Protein_GI_number: 16128919 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 6 187 1 182 182 336 98.0 1e-92 MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGN GVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTV TEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDGYDEMVKVLASVWSQEAASIA QEIKRLP >gi|299857055|gb|ADWS01000009.1| GENE 97 94941 - 96581 1555 546 aa, chain - ## HITS:1 COG:pqiB KEGG:ns NR:ns ## COG: pqiB COG3008 # Protein_GI_number: 16128918 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Escherichia coli K12 # 1 546 1 546 546 1082 100.0 0 MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPEVTLITANAEGIEGGKT TIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDTVFWVVKPQIGREGISGLG TLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRVILDSKKAGQLSPGDPVLFRG YRVGSVETSTFDTQKRNISYQLFINAPYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSL TTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQ PGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHL GELLKRGLRGSLKTGNLVTGALYVDLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQR LMEALDKINKLPLNPMIEQATSTLSESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQST LRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPE PKRAKQ >gi|299857055|gb|ADWS01000009.1| GENE 98 96586 - 97839 739 417 aa, chain - ## HITS:1 COG:pqiA KEGG:ns NR:ns ## COG: pqiA COG2995 # Protein_GI_number: 16128917 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Escherichia coli K12 # 1 417 1 417 417 790 100.0 0 MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAWDAPRQRPTAYALAALF MLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTFFLLFVQLVPAFCLITILL LVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLF CVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIRQGLRSCSCCTAILPADEPVCPR CSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIMVTDLLGSKMPSTILAGVILLWSEG SYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHGKRDSERMHLIYEVVEFVGRWSMIDVF VIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFSAMTFDPRLSWDRQPESEHEES >gi|299857055|gb|ADWS01000009.1| GENE 99 97969 - 99876 2375 635 aa, chain - ## HITS:1 COG:ECs1033 KEGG:ns NR:ns ## COG: ECs1033 COG0488 # Protein_GI_number: 15830287 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 635 1 635 635 1187 99.0 0 MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRI IYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNEL AKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGGWLRKAALGRALVSNPRVLLL DEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRNMATRIVDLDRGKLVTYPGNYDQ YLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKAMRRERGERRE VMGTAKMQVEEASRSGKIVFEMEDVCYQVDGKQLVKDFSAQVLRGDKIALIGPNGCGKTT LLKLMLGQLQADSGRIHVGTKLEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPRHV LGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLE ELIDSYQGTVLLVSHDRQFVDNTVTECWIFEGGGKIGRYVGGYHDARGQQEQYVALKQPA VKKTEEAAAAKAETVKRSSSKLSYKLQRELEQLPQLLEDLEAKLEALQTQVADASFFSQP HEQTQKVLADMAAAEQELEQAFERWEYLEALKNGG >gi|299857055|gb|ADWS01000009.1| GENE 100 99887 - 101995 179 702 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 487 667 174 328 396 73 30 5e-12 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWVQHDEDIWQEVK AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD KQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYANRLRKNLKKFEKWARQEGIECYRL YDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLK TRERQKGKNQYQKLGEKGEFLEVTEYNAHLLVNLTDYLDTGLFLDHRIARRMLGQMSKGK DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA WLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG FRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA >gi|299857055|gb|ADWS01000009.1| GENE 101 102239 - 103348 665 369 aa, chain + ## HITS:1 COG:ycbX_1 KEGG:ns NR:ns ## COG: ycbX_1 COG3217 # Protein_GI_number: 16128914 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli K12 # 1 273 1 273 273 560 98.0 1e-159 MATLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQMVRFTPS PVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSRFFSREVQL RWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGA SAWEEDSWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNSD VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAAADDTANITQQPDANVDIDWQGQAF RGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQLLEGEVTPLKKSAMGDDGTILCCSCV PKTALKLAR >gi|299857055|gb|ADWS01000009.1| GENE 102 103345 - 103887 470 180 aa, chain - ## HITS:1 COG:no KEGG:SSON_0950 NR:ns ## KEGG: SSON_0950 # Name: ycbW # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 180 13 192 192 374 100.0 1e-102 MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSF EEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDT HEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV >gi|299857055|gb|ADWS01000009.1| GENE 103 104061 - 105071 892 336 aa, chain - ## HITS:1 COG:ECs1029 KEGG:ns NR:ns ## COG: ECs1029 COG0167 # Protein_GI_number: 15830283 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 336 1 336 336 679 100.0 0 MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPAKPVNCMGLTFKNPLGL AAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGV DNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPG LRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNID GVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDS VIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTHI >gi|299857055|gb|ADWS01000009.1| GENE 104 105015 - 105224 151 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|213615837|ref|ZP_03371663.1| ## NR: gi|213615837|ref|ZP_03371663.1| hypothetical protein SentesTyp_15729 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] # 1 44 1 44 45 81 88.0 2e-14 MSALWIELEKGFTNEGVVHELSWIPGVQTGGVLCASSDQKGIDLRQKKRKRFPNLFQGRF CSFFALNPP >gi|299857055|gb|ADWS01000009.1| GENE 105 105182 - 105574 188 130 aa, chain - ## HITS:1 COG:ycbF KEGG:ns NR:ns ## COG: ycbF COG3121 # Protein_GI_number: 16128911 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 130 116 245 245 257 97.0 3e-69 MPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNS QGVQLTNPTPYYINLIQLSVNGKALSNAGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGG LSAKKEQNLP >gi|299857055|gb|ADWS01000009.1| GENE 106 105885 - 106400 259 171 aa, chain - ## HITS:1 COG:ECs1027 KEGG:ns NR:ns ## COG: ECs1027 COG3539 # Protein_GI_number: 15830281 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 171 17 187 187 340 99.0 8e-94 MLKRIIWILFLLGLTGGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFF HGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDA KILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD >gi|299857055|gb|ADWS01000009.1| GENE 107 106408 - 106950 244 180 aa, chain - ## HITS:1 COG:ycbU KEGG:ns NR:ns ## COG: ycbU COG3539 # Protein_GI_number: 16128909 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 180 1 180 180 334 100.0 6e-92 MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNI SDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGI AVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ >gi|299857055|gb|ADWS01000009.1| GENE 108 106962 - 108005 321 347 aa, chain - ## HITS:1 COG:ycbT KEGG:ns NR:ns ## COG: ycbT COG3539 # Protein_GI_number: 16128908 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 3 347 12 356 356 686 98.0 0 MLLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEENTAGVVKDKFYQ WNESNDYYVSCDCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLLQVKGSSPTA VPFENVGTGADTRWHICDPGGQRLGGQGASGNSGSFSLKILQPFVGSVVIPPMALARLFE CYNIPAGDSCTTTGTSVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAANFRVVGHKPL GARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISP AGGTLPLSIPDDADSIARMNVYPVSTTGVPPETGRFEATATVRINFD >gi|299857055|gb|ADWS01000009.1| GENE 109 108195 - 110627 1552 810 aa, chain - ## HITS:1 COG:ycbS KEGG:ns NR:ns ## COG: ycbS COG3188 # Protein_GI_number: 16128907 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 794 1 794 866 1523 99.0 0 MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFFKDDPSMVADLSRFEKG QKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTESLDAMGVNTDAFPAFKQL DKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERWDEGINALLLGYS FSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRA VIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQITI KQNGYTIYQTYVSHGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGR IKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYRAAMFGLGFNLGD FGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNQLGTNFQLMGYRYSTSGFYTLSDTM YKHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHT DQQDRLLQFGYNTQIKDLSLGVSWNYSKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTR KKNYAWMTSNTSIDNEGHITQNLGLTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKG AFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVAN STGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAH AGARVLMKTSKQGIYTAAFWRDSDAGRHTD >gi|299857055|gb|ADWS01000009.1| GENE 110 110652 - 111353 325 233 aa, chain - ## HITS:1 COG:ycbR KEGG:ns NR:ns ## COG: ycbR COG3121 # Protein_GI_number: 16128906 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 233 1 233 233 444 99.0 1e-125 MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEGEEQISLGVRNTSPDVP YLIQSWVMTPDNKKSADFIITPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVP STTKREEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLSCTSSADMVTVSNPTPYFITL TDLKIGGKVVKNQMISPFDKYQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS >gi|299857055|gb|ADWS01000009.1| GENE 111 111436 - 111987 299 183 aa, chain - ## HITS:1 COG:ECs1021 KEGG:ns NR:ns ## COG: ECs1021 COG3539 # Protein_GI_number: 15830275 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 183 1 182 182 214 84.0 8e-56 MMTMKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACTLVAATKDSVVTLP NVSATKLQTNGAVSGVKTDVPIALEGCDVTVTKNATFTFSGTADGVQPTAFANQATTDAA TNVALQMYLPDGSTSVTPGTETSNIQLADSAEQTVTFKVDYIATGKATSGNVNAVTNFHI NYY >gi|299857055|gb|ADWS01000009.1| GENE 112 112334 - 112909 565 191 aa, chain + ## HITS:1 COG:ZycbP KEGG:ns NR:ns ## COG: ZycbP COG0431 # Protein_GI_number: 15800798 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Escherichia coli O157:H7 EDL933 # 1 191 1 191 191 353 97.0 8e-98 MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAPEDLLYARFDSPALKTF TEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVVLPLATGGTVAHLLAVDYA LKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTRLDTALETFWQALHRRDVQVP DLLSLRGNAHA >gi|299857055|gb|ADWS01000009.1| GENE 113 112902 - 113861 984 319 aa, chain + ## HITS:1 COG:ssuA KEGG:ns NR:ns ## COG: ssuA COG0715 # Protein_GI_number: 16128903 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Escherichia coli K12 # 1 319 15 333 333 603 99.0 1e-172 MRNIIKLALVGLLSVSTIAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPQSKISW VEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSP IKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAW AIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALT RSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPK KVDIRQRIWQPTQLEGKQL >gi|299857055|gb|ADWS01000009.1| GENE 114 113858 - 115003 1153 381 aa, chain + ## HITS:1 COG:ECs1018 KEGG:ns NR:ns ## COG: ECs1018 COG2141 # Protein_GI_number: 15830272 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 381 1 381 381 755 99.0 0 MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSCEDAWL VAASMIPVTQRLKFLVALRPSVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDG VFLDHSERYEASAEFTQVWRRLLLGETVNFNGKHIHVRGAKLLFPPIQQPYPPLYFGGSS DVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKIRFGIRLHVIVRETNDEAW QAAERLISHLDDETIAKAQAAFARTDSVGQQRMAALHNGKRDNLEISPNLWAGVGLVRGG AGTALVGDGPTVAARINEYAALGIDSFVLSGYPHLEEAYRVGELLFPHLDVAIPEIPQPQ PLNPQGEAVANDFIPRKVAQS >gi|299857055|gb|ADWS01000009.1| GENE 115 115014 - 115805 750 263 aa, chain + ## HITS:1 COG:ssuC KEGG:ns NR:ns ## COG: ssuC COG0600 # Protein_GI_number: 16128901 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Escherichia coli K12 # 1 263 16 278 278 422 100.0 1e-118 MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQ HLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWF GIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPS IMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV SAQLLERLWLRWNPAYHLKEATV >gi|299857055|gb|ADWS01000009.1| GENE 116 115802 - 116569 216 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 12 211 5 214 305 87 33 3e-16 MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL ETPTAGDVLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARRALAAV GLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQ EHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDIPRPRRLGSVRLAELEAEVLQR VMRRGHSEQLIRRHG >gi|299857055|gb|ADWS01000009.1| GENE 117 116776 - 119388 2933 870 aa, chain - ## HITS:1 COG:ECs1015 KEGG:ns NR:ns ## COG: ECs1015 COG0308 # Protein_GI_number: 15830269 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Escherichia coli O157:H7 # 1 870 1 870 870 1749 99.0 0 MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVRHGASDAPLRLNGEDLK LVSVHINDEPWTAWKEEEGALVISNLPERFTLKIINEISPAANTALEGLYQSGDALCTQC EAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPF PKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEER FGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYF HNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPM AHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDD FVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQP LHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPV KLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFR AVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIY NANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQYHEANNMTDALAALSAA VAAQLPCRDALMQEYDDKWHQDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPN RIRSLIGAFAGSNPAAFHAEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKR QEKMRAALEQLKGLENLSGDLYEKITKALA >gi|299857055|gb|ADWS01000009.1| GENE 118 119606 - 120856 1173 416 aa, chain + ## HITS:1 COG:pncB KEGG:ns NR:ns ## COG: pncB COG1488 # Protein_GI_number: 16128898 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Escherichia coli K12 # 17 416 1 400 400 822 99.0 0 MFIVLNAPVRGRYCAPMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD DLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSNDN GKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSALTAGL DMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQAHEWFQ AHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASRYQGLRHDS GDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQLSFGIGTRLTC DIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPHIKKAS >gi|299857055|gb|ADWS01000009.1| GENE 119 120862 - 121131 86 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPAFESRRVRTHPRTVTSLSTATRPWSTSATGTTLIIFSLLIVGKNKHLSTRKWGDTYVT WHLQSDKQNSQMQRKISELKVKKGSRLAP >gi|299857055|gb|ADWS01000009.1| GENE 120 121025 - 122425 1707 466 aa, chain + ## HITS:1 COG:asnS KEGG:ns NR:ns ## COG: asnS COG0017 # Protein_GI_number: 16128897 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 466 1 466 466 959 100.0 0 MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPN YNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEY LREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVS TLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNT SRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRL ERFIEADFAQVDYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYP KDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWY RDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNASF >gi|299857055|gb|ADWS01000009.1| GENE 121 123027 - 124115 1406 362 aa, chain + ## HITS:1 COG:ompF KEGG:ns NR:ns ## COG: ompF COG3203 # Protein_GI_number: 16128896 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 362 1 362 362 628 100.0 1e-180 MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDM TYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDY GRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYL GKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGL KYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKS KAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVY QF >gi|299857055|gb|ADWS01000009.1| GENE 122 124300 - 125490 1495 396 aa, chain + ## HITS:1 COG:aspC KEGG:ns NR:ns ## COG: aspC COG1448 # Protein_GI_number: 16128895 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 396 1 396 396 812 100.0 0 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE TTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSV KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGC CHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLR LREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL >gi|299857055|gb|ADWS01000009.1| GENE 123 125712 - 126359 597 215 aa, chain - ## HITS:1 COG:ycbL KEGG:ns NR:ns ## COG: ycbL COG0491 # Protein_GI_number: 16128894 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Escherichia coli K12 # 1 215 1 215 215 446 99.0 1e-125 MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDDSGLTLMQILLTHGHLD HVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEECQPLTPDRWLNEGDTISIG NVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGRSDFPRGDHNQLISSIKDKLL PLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW >gi|299857055|gb|ADWS01000009.1| GENE 124 126386 - 126934 428 182 aa, chain - ## HITS:1 COG:ECs1009 KEGG:ns NR:ns ## COG: ECs1009 COG3108 # Protein_GI_number: 15830263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 361 100.0 1e-100 MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRG YIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNEL RARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPAR HW >gi|299857055|gb|ADWS01000009.1| GENE 125 127115 - 128962 1297 615 aa, chain - ## HITS:1 COG:ycbB KEGG:ns NR:ns ## COG: ycbB COG2989 # Protein_GI_number: 16128892 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 615 1 615 615 1187 99.0 0 MLLNMMCGRRLSAISLCLAVTFAPLFNAQADESEVIPGDSPVAVSEQGEALPQAQATAIM AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL AEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKP YALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLSDTKPWPQLTGK ATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMD KQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLA LNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLP FRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANM LLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA RSSSQIVSKAEQLIR >gi|299857055|gb|ADWS01000009.1| GENE 126 129223 - 133683 5739 1486 aa, chain - ## HITS:1 COG:ECs1007 KEGG:ns NR:ns ## COG: ECs1007 COG3096 # Protein_GI_number: 15830261 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 1 1486 1 1486 1486 2519 100.0 0 MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHF RNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVAGRDRKVDIKP FAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAMEGVQFKQFNSITDYHSLMFD LGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALR ENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMRHANERRVHLDKALEFRRELHTSRQ QLAAEQYKHVDMARELAEHNGAEGDLEADYQAASDHLNLVQTALRQQEKIERYEADLDEL QIRLEEQNEVVAEAIERQEENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQYNQAI AALNRAKELCHLPDLTADSAAEWLETFQAKELEATEKMLSLEQKMSMAQTAHSQFEQAYQ LVVAINGPLARNEAWDVARELLREGVDQRHLAEQVQPLRMRLSELEQRLREQQEAERLLA DFCKRQGKNFDIDELEALHQELEARIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQR APVWLAAQNSLNQLSEQCGEEFTSSQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEI ERLSQPGGSEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQV TEHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGR AARESRIESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQ LNSRRVELERALSNHENDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRE RLDEAQEAARFVQQFGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFAL TEVVQRRAHFSYSDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQV LASLKSSYDTKKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEK ALTFCEAEMDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAY LSADDLRSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQ DIIRTDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQ GLQNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVM VVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPENISP EKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGSDEAPSQAS >gi|299857055|gb|ADWS01000009.1| GENE 127 133683 - 134387 752 234 aa, chain - ## HITS:1 COG:ECs1006 KEGG:ns NR:ns ## COG: ECs1006 COG3095 # Protein_GI_number: 15830260 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 444 99.0 1e-124 MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNHAFLMDFQEYLEEFYAR YNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLANEGIFTQQEL YDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLNRLRRLGMVWFMGHDSSKFRI TESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQLNDETEENQPDSGEEE >gi|299857055|gb|ADWS01000009.1| GENE 128 134368 - 135690 1598 440 aa, chain - ## HITS:1 COG:mukF KEGG:ns NR:ns ## COG: mukF COG3006 # Protein_GI_number: 16128889 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli K12 # 1 440 1 440 440 832 100.0 0 MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLDGEMSEGELVDAFRHVS DAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYRLTPLGIGITDYYIRQREF STLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLMDE QQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDAT MTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHVHKFIRTAIDMDKNRVFAQR LRQSVQTYFDEPWALTYANADRLLDMRDEEMALRDEEVTGELPEDLEYEEFNEIREQLAA IIEEQLAVYKTRQVPLDLGLVVREYLSQYPRARHFDVARIVIDQAVRLGVAQADFTGLPA KWQPINDYGAKVQAHVIDKY >gi|299857055|gb|ADWS01000009.1| GENE 129 135687 - 136472 691 261 aa, chain - ## HITS:1 COG:smtA KEGG:ns NR:ns ## COG: smtA COG0500 # Protein_GI_number: 16128888 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 261 1 261 261 536 99.0 1e-152 MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDHVLAEMGPQKLRVLDAGGGEGQTAI KMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTL SPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEP YITLGRYIHVTARKPQSKDKV >gi|299857055|gb|ADWS01000009.1| GENE 130 136608 - 137387 700 259 aa, chain + ## HITS:1 COG:ECs1003 KEGG:ns NR:ns ## COG: ECs1003 COG1434 # Protein_GI_number: 15830257 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 449 99.0 1e-126 MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFISIGWLALLLLSLQPVAD RLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENP GSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIGDAP FLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYE TLGRIWQWLKGPSGEPRQE >gi|299857055|gb|ADWS01000009.1| GENE 131 137364 - 138257 632 297 aa, chain - ## HITS:1 COG:no KEGG:JW0902 NR:ns ## KEGG: JW0902 # Name: ycbJ # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 297 1 297 297 588 100.0 1e-166 MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLMARSFSTPGKARQLAWK TTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEAPARTPERWEQLKDQIVEA LLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLNQFNNTGLTMQDKRILFRTRE CLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMVGPGLMLWAPREYELFRLMDNSL AEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVNTGRFSRRNFDLASKSLLPWLA >gi|299857055|gb|ADWS01000009.1| GENE 132 138411 - 139157 804 248 aa, chain - ## HITS:1 COG:kdsB KEGG:ns NR:ns ## COG: kdsB COG1212 # Protein_GI_number: 16128885 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Escherichia coli K12 # 1 248 1 248 248 484 99.0 1e-137 MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGADRIIVATDHEDVARAVEA AGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQ VGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLR HLGIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL ERVRAEMR >gi|299857055|gb|ADWS01000009.1| GENE 133 139154 - 139336 161 60 aa, chain - ## HITS:1 COG:ECs1000 KEGG:ns NR:ns ## COG: ECs1000 COG2835 # Protein_GI_number: 15830254 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 60 1 60 60 119 100.0 2e-27 MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESKS >gi|299857055|gb|ADWS01000009.1| GENE 134 139388 - 140620 831 410 aa, chain - ## HITS:1 COG:ycaQ KEGG:ns NR:ns ## COG: ycaQ COG3214 # Protein_GI_number: 16128883 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 410 1 410 410 808 99.0 0 MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVL FSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQ EHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPHKRHLEGLFTAGKVMVIERRN FQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA WREARAEQQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKR AEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEG IKPTTMLQKGLRQAITDFASWQQATRVTLGRCPQGLFTDCRTGWEIDPVA >gi|299857055|gb|ADWS01000009.1| GENE 135 140657 - 141643 600 328 aa, chain - ## HITS:1 COG:ECs0998 KEGG:ns NR:ns ## COG: ECs0998 COG1663 # Protein_GI_number: 15830252 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Escherichia coli O157:H7 # 1 328 1 328 328 645 99.0 0 MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRAPVPVVVVGNLTAGGNG KTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESNPLLLSADTTTAQAGDEPVLIYQRTDAP VAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVEIVVIDGVRRFGNGWWLPAGP MRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNLRTGTRCDVAQLEHVVAMAGIGH PPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALVSTGQTLVMTEKDAVKCRAFAEENW WYLPVDAQLSGDEPAKLLTQLTSLASGN >gi|299857055|gb|ADWS01000009.1| GENE 136 141640 - 143388 242 582 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 359 568 17 229 245 97 32 3e-19 MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTD RSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQS TGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLAPIVSI AIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQ GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKS LTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALR NINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVA LVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVL LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS TIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQFGQ >gi|299857055|gb|ADWS01000009.1| GENE 137 143425 - 145116 464 563 aa, chain - ## HITS:1 COG:ZycaI_2 KEGG:ns NR:ns ## COG: ZycaI_2 COG2333 # Protein_GI_number: 15800774 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Escherichia coli O157:H7 EDL933 # 238 563 1 326 326 607 97.0 1e-173 MWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAAGLIRGGQVYLP GRWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALATWGMLKLSGRQWSGWDVWICCL AAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLL LMPVQIVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRS LALLFWGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLW QKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPE GVILSHEHLDHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSVHWPLQA SNDKGNNHSCVVKVDDGTNSILLTGDIEVPAEQKMLSRYWQQVQTTLLQVPHHGSNTSSS LPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQQQGYQWLDTPHQGQVTVNFSAQGWRI SSLREQILPRWYHQWFGVPVDNG >gi|299857055|gb|ADWS01000009.1| GENE 138 145123 - 145689 298 188 aa, chain - ## HITS:1 COG:ycaI_1 KEGG:ns NR:ns ## COG: ycaI_1 COG0658 # Protein_GI_number: 16128880 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Escherichia coli K12 # 1 188 27 214 454 351 98.0 4e-97 MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWG ILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQGRRIFPAPGLVLYGEYLP QAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQY LASLQTTL >gi|299857055|gb|ADWS01000009.1| GENE 139 145896 - 146180 376 94 aa, chain - ## HITS:1 COG:ECs0995 KEGG:ns NR:ns ## COG: ECs0995 COG0776 # Protein_GI_number: 15830249 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Escherichia coli O157:H7 # 1 94 1 94 94 174 100.0 4e-44 MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG >gi|299857055|gb|ADWS01000009.1| GENE 140 146300 - 146398 150 32 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238903721|ref|ZP_04649193.1| ribosomal protein S1 [Escherichia coli BL21(DE3)] # 4 32 542 570 570 62 100 0.0 MQTSPTTQWLKLSKQLKASNSLTLRDFYSEVC >gi|299857055|gb|ADWS01000009.1| GENE 141 146340 - 148013 2807 557 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15800772|ref|NP_286786.1| 30S ribosomal protein S1 [Escherichia coli O157:H7 EDL933] # 1 557 1 557 557 1085 100 0.0 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA NFSNNAMAEAFKAAKGE >gi|299857055|gb|ADWS01000009.1| GENE 142 148124 - 148807 267 227 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 7 223 36 286 863 107 30 3e-22 MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDAL VPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAF RELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKE RDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKLALA >gi|299857055|gb|ADWS01000009.1| GENE 143 148980 - 149768 827 262 aa, chain - ## HITS:1 COG:ECs0992 KEGG:ns NR:ns ## COG: ECs0992 COG0501 # Protein_GI_number: 15830246 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 459 99.0 1e-129 MINQRMIHMKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAI ANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGC VRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLS RSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFEKLASLDGGRTQSM FDSHPPSTERAQHIRDRIASGK >gi|299857055|gb|ADWS01000009.1| GENE 144 149913 - 151196 1313 427 aa, chain - ## HITS:1 COG:ECs0991 KEGG:ns NR:ns ## COG: ECs0991 COG0128 # Protein_GI_number: 15830245 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 427 1 427 427 846 100.0 0 MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTAL GVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPLAAALCLGSNDIVLTGEPR MKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTALLMTA PLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVE GDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGE LNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVE EGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQL ARISQAA >gi|299857055|gb|ADWS01000009.1| GENE 145 151267 - 152355 1076 362 aa, chain - ## HITS:1 COG:ECs0990 KEGG:ns NR:ns ## COG: ECs0990 COG1932 # Protein_GI_number: 15830244 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Escherichia coli O157:H7 # 1 362 1 362 362 749 99.0 0 MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDL LNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFD AKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGKDVVVAADFSSTIL SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNT PPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNV PFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERR HG >gi|299857055|gb|ADWS01000009.1| GENE 146 152554 - 153246 716 230 aa, chain - ## HITS:1 COG:ycaP KEGG:ns NR:ns ## COG: ycaP COG2323 # Protein_GI_number: 16128873 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 230 1 230 230 463 100.0 1e-130 MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLG SAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAW SKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQISVYFFEDDKVKPGLLILPSDC TQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANPEWTKASRAKRVT >gi|299857055|gb|ADWS01000009.1| GENE 147 153376 - 155136 1885 586 aa, chain + ## HITS:1 COG:ycaO KEGG:ns NR:ns ## COG: ycaO COG1944 # Protein_GI_number: 16128872 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 586 4 589 589 1186 99.0 0 MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM AIFKKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK Prediction of potential genes in microbial genomes Time: Sun May 15 22:05:46 2011 Seq name: gi|299857054|gb|ADWS01000010.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont9.1, whole genome shotgun sequence Length of sequence - 152859 bp Number of predicted genes - 152, with homology - 152 Number of transcription units - 65, operones - 39 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 141 - 200 2.2 1 1 Tu 1 . + CDS 296 - 697 84 ## COG0366 Glycosidases + Prom 1359 - 1418 4.8 2 2 Op 1 . + CDS 1640 - 2617 1039 ## ECSE_2912 hypothetical protein 3 2 Op 2 3/0.625 + CDS 2637 - 3905 1013 ## COG0579 Predicted dehydrogenase 4 2 Op 3 12/0.000 + CDS 3928 - 5376 1858 ## COG1012 NAD-dependent aldehyde dehydrogenases 5 2 Op 4 4/0.417 + CDS 5390 - 6670 1305 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases + Term 6854 - 6893 1.1 + Prom 6840 - 6899 3.7 6 3 Op 1 1/0.958 + CDS 6981 - 8381 1464 ## COG1113 Gamma-aminobutyrate permease and related permeases 7 3 Op 2 . + CDS 8402 - 9064 733 ## COG1802 Transcriptional regulators + Term 9093 - 9126 5.1 8 4 Op 1 4/0.417 - CDS 9065 - 9514 534 ## COG1652 Uncharacterized protein containing LysM domain - Prom 9537 - 9596 2.0 - Term 9551 - 9582 3.9 9 4 Op 2 . - CDS 9598 - 9756 209 ## COG0401 Uncharacterized homolog of Blt101 - Prom 9813 - 9872 4.8 + Prom 9856 - 9915 5.3 10 5 Op 1 7/0.000 + CDS 9939 - 10238 364 ## COG0640 Predicted transcriptional regulators 11 5 Op 2 . + CDS 10248 - 10772 277 ## COG0607 Rhodanese-related sulfurtransferase + Term 10909 - 10942 1.0 12 6 Tu 1 . - CDS 10819 - 11223 467 ## COG2916 DNA-binding protein H-NS - Prom 11371 - 11430 5.8 + Prom 11717 - 11776 6.2 13 7 Tu 1 . + CDS 11891 - 12340 364 ## ECSP_3616 predicted inner membrane protein + Term 12351 - 12385 8.3 14 8 Tu 1 . - CDS 12377 - 12721 348 ## G2583_3317 hypothetical protein - Prom 12809 - 12868 3.4 + Prom 12788 - 12847 2.4 15 9 Tu 1 . + CDS 12873 - 13202 319 ## COG4575 Uncharacterized conserved protein + Term 13232 - 13268 8.0 + Prom 13208 - 13267 3.7 16 10 Op 1 11/0.000 + CDS 13450 - 13695 246 ## COG0695 Glutaredoxin and related proteins 17 10 Op 2 18/0.000 + CDS 13692 - 14102 253 ## COG1780 Protein involved in ribonucleotide reduction 18 10 Op 3 24/0.000 + CDS 14075 - 16219 2036 ## COG0209 Ribonucleotide reductase, alpha subunit 19 10 Op 4 5/0.083 + CDS 16229 - 17188 915 ## COG0208 Ribonucleotide reductase, beta subunit + Term 17303 - 17339 2.4 + Prom 17455 - 17514 5.4 20 11 Op 1 16/0.000 + CDS 17543 - 18745 1187 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component 21 11 Op 2 14/0.000 + CDS 18738 - 19802 1218 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 22 11 Op 3 3/0.625 + CDS 19860 - 20852 1087 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components + Prom 20953 - 21012 4.4 23 12 Tu 1 . + CDS 21044 - 22228 1218 ## COG0477 Permeases of the major facilitator superfamily + Prom 22273 - 22332 8.4 24 13 Op 1 . + CDS 22352 - 23089 567 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 25 13 Op 2 . + CDS 23079 - 23414 344 ## B21_02503 hypothetical protein + Prom 23422 - 23481 5.2 26 14 Op 1 7/0.000 + CDS 23505 - 24035 519 ## COG1846 Transcriptional regulators + Term 24083 - 24118 5.0 + Prom 24039 - 24098 1.8 27 14 Op 2 19/0.000 + CDS 24162 - 25334 1201 ## COG1566 Multidrug resistance efflux pump 28 14 Op 3 . + CDS 25351 - 26889 1666 ## COG0477 Permeases of the major facilitator superfamily + Term 26900 - 26931 3.4 - Term 26888 - 26919 3.4 29 15 Op 1 6/0.000 - CDS 26953 - 27468 665 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Prom 27522 - 27581 2.5 - Term 27572 - 27603 2.5 30 15 Op 2 5/0.083 - CDS 27617 - 29173 1683 ## COG2918 Gamma-glutamylcysteine synthetase - Prom 29199 - 29258 5.1 31 16 Op 1 6/0.000 - CDS 29260 - 29529 201 ## COG1238 Predicted membrane protein - Prom 29608 - 29667 3.6 32 16 Op 2 5/0.083 - CDS 29670 - 30236 566 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 30261 - 30320 3.5 - TRNA 30517 - 30593 87.2 # Arg ACG 0 0 - TRNA 30792 - 30868 87.2 # Arg ACG 0 0 - TRNA 30932 - 31008 87.2 # Arg ACG 0 0 - TRNA 31206 - 31282 87.2 # Arg ACG 0 0 - TRNA 31286 - 31378 72.5 # Ser GCT 0 0 33 17 Op 1 8/0.000 - CDS 31694 - 31879 204 ## PROTEIN SUPPORTED gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 - Prom 32007 - 32066 4.1 34 17 Op 2 . - CDS 32114 - 34744 2928 ## COG0013 Alanyl-tRNA synthetase + Prom 34434 - 34493 1.9 35 18 Tu 1 . + CDS 34649 - 34831 159 ## ECSP_3645 hypothetical protein - Term 34762 - 34815 12.0 36 19 Op 1 . - CDS 34872 - 35372 607 ## COG2137 Uncharacterized protein conserved in bacteria 37 19 Op 2 . - CDS 35369 - 35542 56 ## gi|300815899|ref|ZP_07096123.1| hypothetical protein HMPREF9345_00930 38 19 Op 3 12/0.000 - CDS 35615 - 36676 1507 ## COG0468 RecA/RadA recombinase 39 19 Op 4 4/0.417 - CDS 36756 - 37253 301 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Prom 37321 - 37380 2.6 40 20 Tu 1 . - CDS 37398 - 38483 1157 ## COG2951 Membrane-bound lytic murein transglycosylase B - Prom 38617 - 38676 4.8 + Prom 38556 - 38615 6.0 41 21 Op 1 6/0.000 + CDS 38739 - 39302 596 ## COG3730 Phosphotransferase system sorbitol-specific component IIC 42 21 Op 2 6/0.000 + CDS 39299 - 40258 1033 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 43 21 Op 3 5/0.083 + CDS 40269 - 40640 284 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 44 21 Op 4 5/0.083 + CDS 40644 - 41423 858 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Prom 41432 - 41491 2.3 45 22 Op 1 4/0.417 + CDS 41528 - 41887 252 ## COG4578 Glucitol operon activator 46 22 Op 2 . + CDS 41954 - 42727 709 ## COG1349 Transcriptional regulators of sugar metabolism 47 22 Op 3 . + CDS 42720 - 43685 1162 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation - Term 43618 - 43656 -0.9 48 23 Tu 1 . - CDS 43682 - 45196 1424 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains - Prom 45270 - 45329 9.6 + Prom 45246 - 45305 3.8 49 24 Op 1 5/0.083 + CDS 45383 - 46822 1293 ## COG0426 Uncharacterized flavoproteins 50 24 Op 2 . + CDS 46819 - 47952 1013 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases - Term 47961 - 48005 4.1 51 25 Tu 1 . - CDS 48080 - 50332 1533 ## COG0068 Hydrogenase maturation factor - Prom 50423 - 50482 1.9 52 26 Tu 1 . - CDS 50485 - 51012 426 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 - Prom 51050 - 51109 3.8 - Term 51107 - 51146 3.0 53 27 Tu 1 . - CDS 51161 - 52171 851 ## COG1609 Transcriptional regulators - Prom 52282 - 52341 5.9 + Prom 52122 - 52181 2.8 54 28 Op 1 8/0.000 + CDS 52431 - 53888 1680 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 55 28 Op 2 . + CDS 53897 - 55321 1634 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 55384 - 55422 5.1 56 29 Op 1 . - CDS 55480 - 55917 594 ## COG0680 Ni,Fe-hydrogenase maturation factor 57 29 Op 2 . - CDS 55943 - 56353 459 ## B21_02533 hypothetical protein 58 29 Op 3 6/0.000 - CDS 56350 - 57117 816 ## COG3260 Ni,Fe-hydrogenase III small subunit 59 29 Op 4 5/0.083 - CDS 57117 - 57659 397 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 60 29 Op 5 7/0.000 - CDS 57669 - 59378 2229 ## COG3261 Ni,Fe-hydrogenase III large subunit 61 29 Op 6 10/0.000 - CDS 59396 - 60319 1408 ## COG0650 Formate hydrogenlyase subunit 4 62 29 Op 7 4/0.417 - CDS 60322 - 62148 1969 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 63 29 Op 8 . - CDS 62145 - 62756 351 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 - Term 62782 - 62832 5.1 64 30 Tu 1 . - CDS 62881 - 63342 424 ## ECO103_3263 formate hydrogenlyase regulatory protein HycA - Prom 63394 - 63453 4.6 + Prom 63353 - 63412 3.9 65 31 Op 1 11/0.000 + CDS 63554 - 63904 191 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 66 31 Op 2 8/0.000 + CDS 63908 - 64780 846 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 67 31 Op 3 13/0.000 + CDS 64771 - 65043 341 ## COG0298 Hydrogenase maturation factor 68 31 Op 4 4/0.417 + CDS 65043 - 66164 1047 ## COG0409 Hydrogenase maturation factor 69 31 Op 5 3/0.625 + CDS 66161 - 67171 1129 ## COG0309 Hydrogenase maturation factor + Term 67211 - 67239 3.0 70 32 Tu 1 . + CDS 67260 - 69323 2209 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains - Term 69320 - 69357 7.8 71 33 Tu 1 . - CDS 69360 - 69713 317 ## SSON_2879 hypothetical protein - Prom 69941 - 70000 5.3 + Prom 69625 - 69684 6.0 72 34 Op 1 . + CDS 69770 - 70003 82 ## gi|300922251|ref|ZP_07138377.1| conserved domain protein 73 34 Op 2 3/0.625 + CDS 70000 - 72561 3272 ## COG0249 Mismatch repair ATPase (MutS family) + Prom 72586 - 72645 8.2 74 35 Tu 1 . + CDS 72667 - 73323 365 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases + Term 73336 - 73384 -0.9 - Term 73310 - 73352 4.5 75 36 Tu 1 . - CDS 73374 - 74141 615 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 74292 - 74351 5.8 + Prom 74196 - 74255 4.8 76 37 Op 1 5/0.083 + CDS 74337 - 75245 822 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 77 37 Op 2 6/0.000 + CDS 75242 - 76504 980 ## COG3395 Uncharacterized protein conserved in bacteria 78 37 Op 3 4/0.417 + CDS 76501 - 77139 454 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 79 37 Op 4 1/0.958 + CDS 77144 - 77920 691 ## COG3622 Hydroxypyruvate isomerase 80 37 Op 5 . + CDS 78009 - 79373 1237 ## COG2610 H+/gluconate symporter and related permeases + Term 79380 - 79422 9.3 - Term 79374 - 79405 3.4 81 38 Op 1 . - CDS 79412 - 79648 297 ## ECO111_3461 hypothetical protein 82 38 Op 2 . - CDS 79659 - 80651 1222 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 83 38 Op 3 6/0.000 - CDS 80690 - 81085 188 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 84 38 Op 4 . - CDS 81085 - 81678 464 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase - Prom 81712 - 81771 3.9 + Prom 81665 - 81724 3.5 85 39 Tu 1 . + CDS 81825 - 82232 273 ## COG1846 Transcriptional regulators + Term 82311 - 82346 2.7 - Term 82295 - 82338 10.8 86 40 Op 1 8/0.000 - CDS 82353 - 83345 1097 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 87 40 Op 2 11/0.000 - CDS 83408 - 84547 667 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 84577 - 84636 2.1 - Term 84577 - 84635 -0.7 88 40 Op 3 13/0.000 - CDS 84687 - 85313 544 ## COG2518 Protein-L-isoaspartate carboxylmethyltransferase 89 40 Op 4 8/0.000 - CDS 85307 - 86068 682 ## COG0496 Predicted acid phosphatase 90 40 Op 5 8/0.000 - CDS 86049 - 87098 1008 ## COG0585 Uncharacterized conserved protein 91 40 Op 6 19/0.000 - CDS 87095 - 87574 786 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 92 40 Op 7 11/0.000 - CDS 87574 - 88284 315 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 93 40 Op 8 . - CDS 88303 - 88614 223 ## COG2919 Septum formation initiator - Prom 88740 - 88799 3.4 94 41 Op 1 . - CDS 88808 - 89131 480 ## EcSMS35_2875 hypothetical protein 95 41 Op 2 7/0.000 - CDS 89181 - 89786 585 ## COG0529 Adenylylsulfate kinase and related kinases 96 41 Op 3 18/0.000 - CDS 89786 - 91213 1647 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 97 41 Op 4 . - CDS 91215 - 92123 1007 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes - Prom 92301 - 92360 4.2 + Prom 92282 - 92341 3.9 98 42 Tu 1 . + CDS 92375 - 93412 613 ## COG2234 Predicted aminopeptidases + Term 93438 - 93470 -0.3 99 43 Op 1 . - CDS 94292 - 94585 170 ## ECH74115_4007 hypothetical protein 100 43 Op 2 . - CDS 94585 - 95457 498 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 101 43 Op 3 . - CDS 95502 - 96152 323 ## ECO103_3298 hypothetical protein 102 43 Op 4 . - CDS 96134 - 96880 487 ## ECIAI1_2860 hypothetical protein 103 43 Op 5 . - CDS 96891 - 97667 816 ## ECSE_3013 hypothetical protein 104 43 Op 6 . - CDS 97609 - 97947 385 ## EcE24377A_3060 CRISPR-associated CSE4 family protein 105 43 Op 7 . - CDS 97959 - 98495 409 ## EC55989_3032 hypothetical protein 106 43 Op 8 . - CDS 98492 - 100054 1027 ## ECSE_3015 hypothetical protein 107 43 Op 9 . - CDS 100152 - 102851 1489 ## COG1203 Predicted helicases - Prom 102932 - 102991 4.8 - Term 103002 - 103044 1.1 108 44 Tu 1 . - CDS 103046 - 103198 134 ## G2583_3410 small toxic membrane polypeptide - Prom 103374 - 103433 3.9 - Term 103405 - 103442 5.3 109 45 Op 1 11/0.000 - CDS 103463 - 104197 920 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 110 45 Op 2 11/0.000 - CDS 104271 - 105983 1887 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) 111 45 Op 3 . - CDS 105983 - 107782 1759 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) - Prom 107945 - 108004 6.2 + Prom 107949 - 108008 3.4 112 46 Op 1 . + CDS 108101 - 108463 362 ## COG0720 6-pyruvoyl-tetrahydropterin synthase 113 46 Op 2 . + CDS 108503 - 109057 419 ## COG1070 Sugar (pentulose and hexulose) kinases - Term 110542 - 110594 5.1 114 47 Tu 1 . - CDS 110613 - 111284 218 ## PROTEIN SUPPORTED gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 - Prom 111307 - 111366 5.5 + Prom 111303 - 111362 4.3 115 48 Op 1 8/0.000 + CDS 111457 - 112059 379 ## COG1704 Uncharacterized conserved protein 116 48 Op 2 . + CDS 112073 - 112978 222 ## COG1512 Beta-propeller domains of methanol dehydrogenase type 117 48 Op 3 . + CDS 113014 - 113376 148 ## ECIAI1_2886 hypothetical protein; putative membrane protein + Term 113388 - 113417 2.1 - Term 113368 - 113412 10.6 118 49 Op 1 8/0.000 - CDS 113432 - 114730 1565 ## COG0148 Enolase - Term 114762 - 114799 9.1 119 49 Op 2 5/0.083 - CDS 114818 - 116455 1650 ## COG0504 CTP synthase (UTP-ammonia lyase) - Prom 116504 - 116563 5.3 - Term 116616 - 116669 1.1 120 50 Op 1 3/0.625 - CDS 116683 - 117474 985 ## COG1694 Predicted pyrophosphatase 121 50 Op 2 8/0.000 - CDS 117545 - 117880 185 ## COG2337 Growth inhibitor 122 50 Op 3 3/0.625 - CDS 117880 - 118128 280 ## COG2336 Growth regulator - Term 118160 - 118193 1.1 123 51 Op 1 8/0.000 - CDS 118206 - 120440 2418 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 124 51 Op 2 . - CDS 120488 - 121789 892 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 121999 - 122058 1.6 + Prom 121729 - 121788 3.6 125 52 Tu 1 . + CDS 121846 - 124602 2466 ## COG0642 Signal transduction histidine kinase + Term 124794 - 124836 5.0 126 53 Op 1 5/0.083 - CDS 124834 - 126174 1671 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 127 53 Op 2 7/0.000 - CDS 126195 - 127535 1290 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 128 53 Op 3 4/0.417 - CDS 127537 - 128889 1461 ## COG0477 Permeases of the major facilitator superfamily - Prom 129025 - 129084 5.7 - Term 129267 - 129301 -0.1 129 54 Op 1 5/0.083 - CDS 129324 - 129773 594 ## COG0716 Flavodoxins 130 54 Op 2 7/0.000 - CDS 129791 - 130573 193 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family 131 54 Op 3 . - CDS 130573 - 130902 398 ## COG3098 Uncharacterized protein conserved in bacteria - Prom 130927 - 130986 6.4 - Term 131387 - 131441 0.5 132 55 Tu 1 . - CDS 131524 - 132069 522 ## ECO103_3336 SecY interacting protein Syd - Prom 132103 - 132162 3.5 + Prom 131986 - 132045 3.6 133 56 Op 1 6/0.000 + CDS 132137 - 132985 526 ## COG0780 Enzyme related to GTP cyclohydrolase I + Prom 133002 - 133061 1.7 134 56 Op 2 4/0.417 + CDS 133097 - 134461 1384 ## COG1611 Predicted Rossmann fold nucleotide-binding protein + Term 134472 - 134507 4.0 + Prom 134763 - 134822 6.8 135 57 Op 1 10/0.000 + CDS 135018 - 136307 1469 ## COG0814 Amino acid permeases + Term 136316 - 136347 3.9 136 57 Op 2 2/0.833 + CDS 136365 - 137732 1465 ## COG1760 L-serine deaminase + Prom 137764 - 137823 2.7 137 58 Tu 1 . + CDS 137844 - 138599 502 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) + Term 138606 - 138648 8.2 - Term 138485 - 138522 1.0 138 59 Op 1 5/0.083 - CDS 138654 - 139802 1190 ## COG1454 Alcohol dehydrogenase, class IV 139 59 Op 2 . - CDS 139830 - 140477 670 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 140539 - 140598 2.4 + Prom 140849 - 140908 6.7 140 60 Op 1 3/0.625 + CDS 141024 - 142340 878 ## COG0738 Fucose permease 141 60 Op 2 4/0.417 + CDS 142373 - 144148 1815 ## COG2407 L-fucose isomerase and related proteins 142 60 Op 3 5/0.083 + CDS 144227 - 145675 998 ## COG1070 Sugar (pentulose and hexulose) kinases 143 60 Op 4 4/0.417 + CDS 145677 - 146099 395 ## COG4154 Fucose dissimilation pathway protein FucU + Term 146113 - 146144 3.5 144 61 Tu 1 . + CDS 146157 - 146888 527 ## COG1349 Transcriptional regulators of sugar metabolism + Term 146900 - 146940 1.2 145 62 Op 1 5/0.083 - CDS 146932 - 148032 1152 ## COG2933 Predicted SAM-dependent methyltransferase 146 62 Op 2 6/0.000 - CDS 148025 - 148420 470 ## COG2363 Uncharacterized small membrane protein 147 62 Op 3 . - CDS 148439 - 149356 649 ## COG0583 Transcriptional regulator - Prom 149428 - 149487 6.5 148 63 Tu 1 . - CDS 149707 - 149934 356 ## ECIAI1_2919 hypothetical protein - Prom 149954 - 150013 4.3 + Prom 149939 - 149998 5.2 149 64 Op 1 7/0.000 + CDS 150126 - 151331 1004 ## COG0520 Selenocysteine lyase 150 64 Op 2 . + CDS 151331 - 151774 426 ## COG2166 SufE protein probably involved in Fe-S center assembly + Term 151784 - 151831 7.2 - Term 151771 - 151819 11.2 151 65 Op 1 8/0.000 - CDS 151825 - 152631 832 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 - Term 152638 - 152671 4.1 152 65 Op 2 . - CDS 152708 - 152857 64 ## COG2821 Membrane-bound lytic murein transglycosylase Predicted protein(s) >gi|299857054|gb|ADWS01000010.1| GENE 1 296 - 697 84 133 aa, chain + ## HITS:1 COG:b2657 KEGG:ns NR:ns ## COG: b2657 COG0366 # Protein_GI_number: 16130571 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 132 13 144 210 255 99.0 2e-68 MLQNQYVREMRKYGVRGLRYDAAKHSKHEQIERSITPPLKNYNERLHNTNLFNPKYQKKA VMNYMEYLVTCQLDEQQMSSLLYERDDLSAIDFSLLMKTIKAFSFGGDLQTLASKPGSTI SSIPSERRILINH >gi|299857054|gb|ADWS01000010.1| GENE 2 1640 - 2617 1039 325 aa, chain + ## HITS:1 COG:no KEGG:ECSE_2912 NR:ns ## KEGG: ECSE_2912 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 325 36 360 360 643 100.0 0 MNALTAVHNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYK SFLRFRVGKILDDLCANQLQPLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAH LIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMKIDE QNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPV MRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPH PDLRRELMRQRGYFAYATHHYQTHQ >gi|299857054|gb|ADWS01000010.1| GENE 3 2637 - 3905 1013 422 aa, chain + ## HITS:1 COG:ygaF KEGG:ns NR:ns ## COG: ygaF COG0579 # Protein_GI_number: 16130574 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli K12 # 1 422 23 444 444 845 97.0 0 MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGS LKAQFCLAGNRATKAFCDQNDIRYDNCGKMLVATSDLEMEQMRALWERTAANGIEREWLN AEELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQARGGEIIYNAEVSALSEHKNG VVVRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHL IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRR VLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDF LFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAF NQ >gi|299857054|gb|ADWS01000010.1| GENE 4 3928 - 5376 1858 482 aa, chain + ## HITS:1 COG:ECs3522 KEGG:ns NR:ns ## COG: ECs3522 COG1012 # Protein_GI_number: 15832776 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 482 1 482 482 946 98.0 0 MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANHA LPAWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPMVRKLSFTGSTEIGRH LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG VYDRFAEKLQQAVSKLHIGDGLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA DERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL >gi|299857054|gb|ADWS01000010.1| GENE 5 5390 - 6670 1305 426 aa, chain + ## HITS:1 COG:ECs3523 KEGG:ns NR:ns ## COG: ECs3523 COG0160 # Protein_GI_number: 15832777 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Escherichia coli O157:H7 # 1 426 1 426 426 843 99.0 0 MSSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFSGGIAVLNTGHLHP KVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVK IARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISE DDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE VQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAG NPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLVIAEKHPEIGDVRGLGAMIAIELF EDGDHSKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQC FAEAKQ >gi|299857054|gb|ADWS01000010.1| GENE 6 6981 - 8381 1464 466 aa, chain + ## HITS:1 COG:gabP KEGG:ns NR:ns ## COG: gabP COG1113 # Protein_GI_number: 16130577 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 466 1 466 466 824 100.0 0 MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVM IMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSW VPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPY AEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNS VIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSC LNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVF KFLIDSSGAIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIGFITFVLVV MLFRPAQQLEVISTGLLAIGIICTVPIMARWKKLVLWQKTPVHNTR >gi|299857054|gb|ADWS01000010.1| GENE 7 8402 - 9064 733 220 aa, chain + ## HITS:1 COG:ECs3525 KEGG:ns NR:ns ## COG: ECs3525 COG1802 # Protein_GI_number: 15832779 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 220 7 226 226 411 100.0 1e-115 MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVN QKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDAS EKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKH DQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN >gi|299857054|gb|ADWS01000010.1| GENE 8 9065 - 9514 534 149 aa, chain - ## HITS:1 COG:ECs3526 KEGG:ns NR:ns ## COG: ECs3526 COG1652 # Protein_GI_number: 15832780 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Escherichia coli O157:H7 # 1 149 1 149 149 266 100.0 7e-72 MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLSKTGIPDADKVNIQIADGKATVTGD GLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVKSGDTLSAISKQVYGNANL YNKIFEANKPMLKSPDKIYPGQVLRIPEE >gi|299857054|gb|ADWS01000010.1| GENE 9 9598 - 9756 209 52 aa, chain - ## HITS:1 COG:ECs3527 KEGG:ns NR:ns ## COG: ECs3527 COG0401 # Protein_GI_number: 15832781 # Func_class: S Function unknown # Function: Uncharacterized homolog of Blt101 # Organism: Escherichia coli O157:H7 # 1 52 1 52 52 77 100.0 6e-15 MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIHAFWVQTRD >gi|299857054|gb|ADWS01000010.1| GENE 10 9939 - 10238 364 99 aa, chain + ## HITS:1 COG:ygaV KEGG:ns NR:ns ## COG: ygaV COG0640 # Protein_GI_number: 16130581 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 99 1 99 99 162 100.0 2e-40 MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLA RMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP >gi|299857054|gb|ADWS01000010.1| GENE 11 10248 - 10772 277 174 aa, chain + ## HITS:1 COG:ygaP KEGG:ns NR:ns ## COG: ygaP COG0607 # Protein_GI_number: 16130582 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 174 1 174 174 335 98.0 3e-92 MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPPKLRREQI IFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKRAGLPVAVNKSQPLPLMRQVQIA AGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCGMARLLDKMPWNQRA >gi|299857054|gb|ADWS01000010.1| GENE 12 10819 - 11223 467 134 aa, chain - ## HITS:1 COG:ECs3530 KEGG:ns NR:ns ## COG: ECs3530 COG2916 # Protein_GI_number: 15832784 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 213 100.0 1e-55 MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKIST WLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIA QALAEGKSLDDFLI >gi|299857054|gb|ADWS01000010.1| GENE 13 11891 - 12340 364 149 aa, chain + ## HITS:1 COG:no KEGG:ECSP_3616 NR:ns ## KEGG: ECSP_3616 # Name: ygaW # Def: predicted inner membrane protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 149 1 149 149 269 100.0 2e-71 MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYSRLVAIPVNILIAWPYG MYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLVVGADWHQIMAAVSSNIVV SMLMGAVYGYFLDYCRRLFKVSRYQQVKA >gi|299857054|gb|ADWS01000010.1| GENE 14 12377 - 12721 348 114 aa, chain - ## HITS:1 COG:no KEGG:G2583_3317 NR:ns ## KEGG: G2583_3317 # Name: ygaC # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 114 1 114 114 219 99.0 2e-56 MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSS TLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVALERYLNGLFGETS >gi|299857054|gb|ADWS01000010.1| GENE 15 12873 - 13202 319 109 aa, chain + ## HITS:1 COG:ECs3533 KEGG:ns NR:ns ## COG: ECs3533 COG4575 # Protein_GI_number: 15832787 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 109 5 113 113 192 100.0 2e-49 MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRAR MHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS >gi|299857054|gb|ADWS01000010.1| GENE 16 13450 - 13695 246 81 aa, chain + ## HITS:1 COG:ECs3536 KEGG:ns NR:ns ## COG: ECs3536 COG0695 # Protein_GI_number: 15832790 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Escherichia coli O157:H7 # 1 81 1 81 81 164 100.0 4e-41 MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRAQGFRQLPVVIAGDLS WSGFRPDMINRLHPAPHAASA >gi|299857054|gb|ADWS01000010.1| GENE 17 13692 - 14102 253 136 aa, chain + ## HITS:1 COG:ECs3537 KEGG:ns NR:ns ## COG: ECs3537 COG1780 # Protein_GI_number: 15832791 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 268 100.0 1e-72 MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPR QVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIEN VRKGVTEFWQRQPQNA >gi|299857054|gb|ADWS01000010.1| GENE 18 14075 - 16219 2036 714 aa, chain + ## HITS:1 COG:nrdE KEGG:ns NR:ns ## COG: nrdE COG0209 # Protein_GI_number: 16130589 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Escherichia coli K12 # 1 714 1 714 714 1444 98.0 0 MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQ QRLNWLVNEGYYDESVLNRYSRDFVITLFAHAHTSGFRFQTFLGAWKFYTSYTLKTFDGK RYLEDFADRVTMVALTLAQGDATLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFL LRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLED AFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLA KENAQMALFSPYDVERVYGKPFADIAISEHYDELVADERIRKKYLNARDFFQRLAEIQFE SGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYARTGHDISCNLGSL NIAHTMDSPNFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAR EGIAYGSPEALDFTNLYFYTITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQG NWQPKTAKVGELFARSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATS SIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQG LSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL >gi|299857054|gb|ADWS01000010.1| GENE 19 16229 - 17188 915 319 aa, chain + ## HITS:1 COG:nrdF KEGG:ns NR:ns ## COG: nrdF COG0208 # Protein_GI_number: 16130590 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Escherichia coli K12 # 1 319 1 319 319 635 99.0 0 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSVVEQQLTMRVF TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA AYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL YAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGS GSSYVMGKAVETEDEDWNF >gi|299857054|gb|ADWS01000010.1| GENE 20 17543 - 18745 1187 400 aa, chain + ## HITS:1 COG:proV KEGG:ns NR:ns ## COG: proV COG4175 # Protein_GI_number: 16130591 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Escherichia coli K12 # 1 400 1 400 400 762 99.0 0 MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIM GLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPH MTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALA INPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQN GEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSAKDIARRTPNGLIRKTPGFGPRSAL KLLQDEDREYGYVIERGNKFVGAVSIDSLKTALTQQQGLDAALIDAPLAVDAQTPLSELL SHVGQAPCAVPVVDEDQQYVGIISKGMLLRALDREGGNNG >gi|299857054|gb|ADWS01000010.1| GENE 21 18738 - 19802 1218 354 aa, chain + ## HITS:1 COG:ECs3541 KEGG:ns NR:ns ## COG: ECs3541 COG4176 # Protein_GI_number: 15832795 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 354 1 354 354 582 99.0 1e-166 MADQNNPWDTTPAADSAVQSADAWGTPATAPTDGGGADWLTSTPAPNVEHFNILDPFHKT LIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGMPAPVAIIVFALIAWQI SGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKII RPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEA SRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGR LDMGLATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRWYTTGPVGLLTRPFIK >gi|299857054|gb|ADWS01000010.1| GENE 22 19860 - 20852 1087 330 aa, chain + ## HITS:1 COG:ECs3542 KEGG:ns NR:ns ## COG: ECs3542 COG2113 # Protein_GI_number: 15832796 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 652 99.0 0 MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVN KPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLID KKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAAYELTHTV THNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNA DTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASE GDIQGHVDGWIKAHQQQFDGWVNEALAAQK >gi|299857054|gb|ADWS01000010.1| GENE 23 21044 - 22228 1218 394 aa, chain + ## HITS:1 COG:ECs3543 KEGG:ns NR:ns ## COG: ECs3543 COG0477 # Protein_GI_number: 15832797 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 394 1 394 394 619 99.0 1e-177 MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLSASSAGFIVTAAQLGYA AGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMMLLGTALTGLFSVVAQILV PLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASVLMALMALA LWRGLPQMKSETHLNYPQLLGSVFSMFINDKILRTRALLGCLTFANFSILWTSMAFLLAA PPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTS VLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAW QHGGWAGVCLAGATIALVNLLVWWRGFHRQEAAN >gi|299857054|gb|ADWS01000010.1| GENE 24 22352 - 23089 567 245 aa, chain + ## HITS:1 COG:ygaZ KEGG:ns NR:ns ## COG: ygaZ COG1296 # Protein_GI_number: 16130594 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Escherichia coli K12 # 1 245 1 245 245 432 99.0 1e-121 MESPTPQPAPGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLGFSPLESVFFSCIIYAG ASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRIIQRLQKSKTALWAFGLTDE VFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGAFSGSGLLQGYPAVEAALGFM LPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIPVAILAGIVCGCLTALIQAFWQG APDEL >gi|299857054|gb|ADWS01000010.1| GENE 25 23079 - 23414 344 111 aa, chain + ## HITS:1 COG:no KEGG:B21_02503 NR:ns ## KEGG: B21_02503 # Name: ygaH # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 111 1 111 111 176 99.0 2e-43 MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTA PEVMHDTRRFVPTLVGFAVLGDSFYKTRSIIIPTLLSALAYGLAWKVMAII >gi|299857054|gb|ADWS01000010.1| GENE 26 23505 - 24035 519 176 aa, chain + ## HITS:1 COG:ECs3546 KEGG:ns NR:ns ## COG: ECs3546 COG1846 # Protein_GI_number: 15832800 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 306 100.0 2e-83 MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMA LITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEK GHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS >gi|299857054|gb|ADWS01000010.1| GENE 27 24162 - 25334 1201 390 aa, chain + ## HITS:1 COG:emrA KEGG:ns NR:ns ## COG: emrA COG1566 # Protein_GI_number: 16130597 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 390 1 390 390 687 99.0 0 MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVLRHFEETDDAYVAGN QIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMI NSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQ YNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIVSPMTGYVSRRAVQPGAQISPT TPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAF SLLPVQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVR STPVAVSTAREISLAPVNKLIDDIVKANAG >gi|299857054|gb|ADWS01000010.1| GENE 28 25351 - 26889 1666 512 aa, chain + ## HITS:1 COG:STM2815 KEGG:ns NR:ns ## COG: STM2815 COG0477 # Protein_GI_number: 16766126 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 502 1 502 512 907 95.0 0 MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGV ANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLI PLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGVA VVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQIMLDRGKELDWFSSQEIIILTVV AVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYG YTATWAGLASAPVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAYTFEPGMD FGASAWPQFIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTM WTNRESMHHAQLTESVNPFNPNAQAMYSQLEGLGMTQQQASGWIAQQITNQGLIISANEI FWMSAGIFLVLLGLVWFAKPPFGAGGGGGGAH >gi|299857054|gb|ADWS01000010.1| GENE 29 26953 - 27468 665 171 aa, chain - ## HITS:1 COG:luxS KEGG:ns NR:ns ## COG: luxS COG1854 # Protein_GI_number: 16130599 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Escherichia coli K12 # 1 171 1 171 171 348 99.0 3e-96 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPEEKLQELHI >gi|299857054|gb|ADWS01000010.1| GENE 30 27617 - 29173 1683 518 aa, chain - ## HITS:1 COG:gshA KEGG:ns NR:ns ## COG: gshA COG2918 # Protein_GI_number: 16130600 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Escherichia coli K12 # 1 518 1 518 518 1079 99.0 0 MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGHPEALGSALTHKWITTD FAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPLSMPCYIAEGQDIELAQYG TSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFWQAKCGDISGADAKEKISAGY FRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPFEKTECGMYYLPYATSLRLSDLG YTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAKIGIEKDGKRLQINSNVLQIENELY APIRPKRVTRSGESPSDALLRGGIEYIEVRSLDINPFSPIGVDEQQVRFLDLFMVWCALA DAPEMSSSELACTRVNWNRVILEGRKPGLTLGIGCETAQFPLLQVGKDLFRDLKRVAQTL DSINGGEAYQKVCDELVACFDNPDLTFSARILRSMIDTGIGGTGKAFAEAYRNLLREEPL EILREEDFVAEREASERRQQEMETADTEPFAVWLEKHA >gi|299857054|gb|ADWS01000010.1| GENE 31 29260 - 29529 201 89 aa, chain - ## HITS:1 COG:yqaA KEGG:ns NR:ns ## COG: yqaA COG1238 # Protein_GI_number: 16130601 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 75 49 123 142 130 96.0 5e-31 MGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLCLLAGWM RISWGPVIFFCALVKRYAMLQLQQRPFRA >gi|299857054|gb|ADWS01000010.1| GENE 32 29670 - 30236 566 188 aa, chain - ## HITS:1 COG:ECs3552 KEGG:ns NR:ns ## COG: ECs3552 COG0637 # Protein_GI_number: 15832806 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 371 99.0 1e-103 MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMIALNGSPTWRIAQAIIE LNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALL AHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRIGVQPTQCVVFEDADFGIQAARAAGM DAVDVRLL >gi|299857054|gb|ADWS01000010.1| GENE 33 31694 - 31879 204 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 [Haemophilus parasuis 29755] # 1 60 1 60 61 83 61 7e-15 MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSS Y >gi|299857054|gb|ADWS01000010.1| GENE 34 32114 - 34744 2928 876 aa, chain - ## HITS:1 COG:ECs3554 KEGG:ns NR:ns ## COG: ECs3554 COG0013 # Protein_GI_number: 15832808 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 876 1 876 876 1719 99.0 0 MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYS RATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKW FALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCG PCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMG LERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVM PSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVL KTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKV DEAGFEAAMEEQRRRAREASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAV DAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLAAG SLKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSH NEAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGD FSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHL LKGDSNNLADKVRSVLERTRQLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSG VEPKMLRTMVDDLKNQLGSTIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVG GKGGGRPDMAQAGGTDAAALPAALASVKGWVSAKLQ >gi|299857054|gb|ADWS01000010.1| GENE 35 34649 - 34831 159 60 aa, chain + ## HITS:1 COG:no KEGG:ECSP_3645 NR:ns ## KEGG: ECSP_3645 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 60 74 133 133 117 100.0 1e-25 MGYQGAAGNYLMSLTMEKVEKRLTDLSGALAHNYPEIKLTKYRHQLQRVLTAGLVTEKWE >gi|299857054|gb|ADWS01000010.1| GENE 36 34872 - 35372 607 166 aa, chain - ## HITS:1 COG:ECs3555 KEGG:ns NR:ns ## COG: ECs3555 COG2137 # Protein_GI_number: 15832809 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 311 100.0 3e-85 MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVI AWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCAL ARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIWRNFAD >gi|299857054|gb|ADWS01000010.1| GENE 37 35369 - 35542 56 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300815899|ref|ZP_07096123.1| ## NR: gi|300815899|ref|ZP_07096123.1| hypothetical protein HMPREF9345_00930 [Escherichia coli MS 107-1] # 1 57 1 57 57 114 100.0 2e-24 MRGTGQHWREKLLSPRSSNELGLREHSAHSLTIKSVYQQNLGRICGPFAFLSCKDMP >gi|299857054|gb|ADWS01000010.1| GENE 38 35615 - 36676 1507 353 aa, chain - ## HITS:1 COG:ECs3556 KEGG:ns NR:ns ## COG: ECs3556 COG0468 # Protein_GI_number: 15832810 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 666 100.0 0 MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQP DTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIG QGKANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF >gi|299857054|gb|ADWS01000010.1| GENE 39 36756 - 37253 301 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 8 157 748 898 904 120 46 4e-26 MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAGSSAWFERGFVTYSNEA KAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSISGIAGPDGGSEEKPVGTV WFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQFLQNT >gi|299857054|gb|ADWS01000010.1| GENE 40 37398 - 38483 1157 361 aa, chain - ## HITS:1 COG:mltB KEGG:ns NR:ns ## COG: mltB COG2951 # Protein_GI_number: 16130608 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Escherichia coli K12 # 1 361 1 361 361 717 100.0 0 MFKRRYVTLLPLFVLLAACSSKPKPTETDTTTGTPSGGFLLEPQHNVMQMGGDFANNPNA QQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTTSVKPPSGPNGAWLRYRKK FITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALAT LSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSG DGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMANGQAPGLPNGFKTKYSISQLAAAGL TPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVALARV Q >gi|299857054|gb|ADWS01000010.1| GENE 41 38739 - 39302 596 187 aa, chain + ## HITS:1 COG:srlA KEGG:ns NR:ns ## COG: srlA COG3730 # Protein_GI_number: 16130609 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIC # Organism: Escherichia coli K12 # 1 187 1 187 187 364 99.0 1e-101 MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNALINFIGQHRIERFAQRC AGNPVSRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPG ELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWVTDLTTAIFEKKMGIQLEQKV HLAGATS >gi|299857054|gb|ADWS01000010.1| GENE 42 39299 - 40258 1033 319 aa, chain + ## HITS:1 COG:srlE KEGG:ns NR:ns ## COG: srlE COG3732 # Protein_GI_number: 16130610 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Escherichia coli K12 # 1 319 1 319 319 590 99.0 1e-168 MTHIRIEKGTGGWGGPLELKATPGKKIVYITAGTRPAIVDKLAQLTGWQAIDGFKEGEPA EAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITVV GDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVAVLFQSGRDTIDTVLKTILPF MAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLALICSFPLLSPFLGPGAVIAQVI GVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVLVSRF LTGAPTVLIAWFVSGFIYQ >gi|299857054|gb|ADWS01000010.1| GENE 43 40269 - 40640 284 123 aa, chain + ## HITS:1 COG:srlB KEGG:ns NR:ns ## COG: srlB COG3731 # Protein_GI_number: 16130611 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Escherichia coli K12 # 1 123 1 123 123 248 100.0 2e-66 MTVIYQTTITRIGASAIDALSDQMLITFREGAPADLEEYCFIHCHGELKGALHPGLQFSL GQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHVAGPVPDDIAPGSVLKFES VKE >gi|299857054|gb|ADWS01000010.1| GENE 44 40644 - 41423 858 259 aa, chain + ## HITS:1 COG:srlD KEGG:ns NR:ns ## COG: srlD COG1028 # Protein_GI_number: 16130612 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 259 1 259 259 493 100.0 1e-139 MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGA DATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCA REFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVH SLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASP KASYCTGQSINVTGGQVMF >gi|299857054|gb|ADWS01000010.1| GENE 45 41528 - 41887 252 119 aa, chain + ## HITS:1 COG:gutM KEGG:ns NR:ns ## COG: gutM COG4578 # Protein_GI_number: 16130613 # Func_class: K Transcription # Function: Glucitol operon activator # Organism: Escherichia coli K12 # 1 119 1 119 119 231 100.0 2e-61 MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALD DQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG >gi|299857054|gb|ADWS01000010.1| GENE 46 41954 - 42727 709 257 aa, chain + ## HITS:1 COG:srlR KEGG:ns NR:ns ## COG: srlR COG1349 # Protein_GI_number: 16130614 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 257 1 257 257 504 100.0 1e-143 MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNK EESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMT NSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNA GVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQ ALEEKGIDVIITGESNE >gi|299857054|gb|ADWS01000010.1| GENE 47 42720 - 43685 1162 321 aa, chain + ## HITS:1 COG:gutQ_1 KEGG:ns NR:ns ## COG: gutQ_1 COG0794 # Protein_GI_number: 16130615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 14 205 1 192 192 363 100.0 1e-100 MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL AMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALAASVMDAMLELSRTGLGLVAVCDAQQ QVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVV DENGKLTGAINLQDFYQAGII >gi|299857054|gb|ADWS01000010.1| GENE 48 43682 - 45196 1424 504 aa, chain - ## HITS:1 COG:ECs3565 KEGG:ns NR:ns ## COG: ECs3565 COG3604 # Protein_GI_number: 15832819 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli O157:H7 # 1 504 26 529 529 935 99.0 0 MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLA KDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFA GQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMMPGDATPFE AVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLV YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRE RGDDVILLAGYFCEQCRLRLGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLSRA TRSGDEVILEAQHFAFPEVTLPPPEAAAVPVVKQNLREATEAFQRETIRQALAQNHHNWA ACARMLETDVANLHRLAKRLGLKD >gi|299857054|gb|ADWS01000010.1| GENE 49 45383 - 46822 1293 479 aa, chain + ## HITS:1 COG:ygaK_1 KEGG:ns NR:ns ## COG: ygaK_1 COG0426 # Protein_GI_number: 16130617 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Escherichia coli K12 # 1 394 1 394 394 827 99.0 0 MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEKNVLIDTVDHKFSREFV QNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYCTANAIDSINGHHHHPEWN FNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDAVLFSNDAFGQHYCDEHLFND EVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNLPVDMIATSHGVVWRDNPTQIVE LYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGIAETDPRVAVKIFNVARSDKNEILT NVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSTRL QDAGFEMSLSLKAKWRPDQDALELCREHGREIARQWALAPLPQSTVNTVVKEETSATTTA DLGPRMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASEAK >gi|299857054|gb|ADWS01000010.1| GENE 50 46819 - 47952 1013 377 aa, chain + ## HITS:1 COG:ygbD KEGG:ns NR:ns ## COG: ygbD COG0446 # Protein_GI_number: 16130618 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 377 1 377 377 722 99.0 0 MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKPDLSHVISQGQRADDLT RQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRE LMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFCRAGKAVTLIDNAASILASL MPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILATLDRQRSIEVDAVIAATGLRPE TALARRAGLTINRGVCVDSYLQTSNDDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNLL GNNTPLKLPAMLVKIKTPELPLHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVV SEDRMKEAFGLLKTLPM >gi|299857054|gb|ADWS01000010.1| GENE 51 48080 - 50332 1533 750 aa, chain - ## HITS:1 COG:hypF KEGG:ns NR:ns ## COG: hypF COG0068 # Protein_GI_number: 16130619 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 750 1 750 750 1435 98.0 0 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLLEDPETFLVQ LHQHCPPLARIDSVEREPYIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLR ARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVM LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALEDLQGIADGFLIHNRDIVQRMD DSVVRESGEMLRRSRGYVPDALVLPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDVHPGYVSSQWASEMNMPTQTVLHHHAHA AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRLFDA VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPLVDNQLDLATFWQQWLNWQAP VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP QSLPAGDGGLSLGQGVIAAARWLAGEVQNG >gi|299857054|gb|ADWS01000010.1| GENE 52 50485 - 51012 426 175 aa, chain - ## HITS:1 COG:ECs3569 KEGG:ns NR:ns ## COG: ECs3569 COG1142 # Protein_GI_number: 15832823 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli O157:H7 # 1 175 1 175 175 302 100.0 2e-82 MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQ CEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLN VRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF >gi|299857054|gb|ADWS01000010.1| GENE 53 51161 - 52171 851 336 aa, chain - ## HITS:1 COG:ECs3570 KEGG:ns NR:ns ## COG: ECs3570 COG1609 # Protein_GI_number: 15832824 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 336 2 337 337 655 98.0 0 MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESGYRPNLLARNLSAKSTQ TLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDA IMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQ EIAFLTGSMDSPTSVERLAGYKDALSQHGIALNEKLIANGKWTPASGAEGVETLLERGAK FSALVASNDDMAIGAIKALHERGVAVPEQVSVIGFDDIAIAPYTVPALSSVKIPVTEMIQ EIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIALSR >gi|299857054|gb|ADWS01000010.1| GENE 54 52431 - 53888 1680 485 aa, chain + ## HITS:1 COG:ECs3571_2 KEGG:ns NR:ns ## COG: ECs3571_2 COG1263 # Protein_GI_number: 15832825 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 91 485 2 396 396 650 98.0 0 MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDQLIDSPTLKTIPGVLGVVRSD NQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRIGAGILDALIGTMSPLIPA IIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFFLPLMVAASAAIKFKTNMSLA IAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYTYTVIPALVMTWCLSYIERWVDR ITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGSAISALVYTIHGYLGWLSVAIMGAL WPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQT ALAAAASAIMAGISEPALYGVAIRLKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFT SVQFFDPANPMSIVWVFAVMALAVMLSFILTLLLGFEDIPVEEATAEARKHQSVQPTVAK EVSLN >gi|299857054|gb|ADWS01000010.1| GENE 55 53897 - 55321 1634 474 aa, chain + ## HITS:1 COG:ascB KEGG:ns NR:ns ## COG: ascB COG2723 # Protein_GI_number: 16130623 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 474 1 474 474 991 98.0 0 MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEF YPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEE CKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYARTCFEAFDGLVKYWLTFNE INIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG NFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPAYSARVFREKGVTIDKAPGDDEILK NTVDFVSFSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMM YDRYQKPLFLVENGLGAKDELAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWG CIDLVSASTGEMSKRYGFVYVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDLE >gi|299857054|gb|ADWS01000010.1| GENE 56 55480 - 55917 594 145 aa, chain - ## HITS:1 COG:ECs3573 KEGG:ns NR:ns ## COG: ECs3573 COG0680 # Protein_GI_number: 15832827 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 145 12 156 156 283 100.0 7e-77 MMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPENDIVAIRELRPTRLLIVDATDMGLNPG EIRIIDPDDIAEMFMMTTHNMPLNYLIDQLKEDIGEVIFLGIQPDIVGFYYPMTQPIKDA VETVYQRLEGWEGNGGFAQLAVEEE >gi|299857054|gb|ADWS01000010.1| GENE 57 55943 - 56353 459 136 aa, chain - ## HITS:1 COG:no KEGG:B21_02533 NR:ns ## KEGG: B21_02533 # Name: hycH # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 136 1 136 136 269 99.0 2e-71 MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDCLEAALTCPWDEYLAWI ATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARVAQTSQQQEWSTMLLSMLHD IHQENAIYLMVRRLRD >gi|299857054|gb|ADWS01000010.1| GENE 58 56350 - 57117 816 255 aa, chain - ## HITS:1 COG:ECs3575 KEGG:ns NR:ns ## COG: ECs3575 COG3260 # Protein_GI_number: 15832829 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III small subunit # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 529 99.0 1e-150 MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLS PLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGG IFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGEQDEQPA EILHGDMVQPLRVKVDREARRLAGYRYGRQIADDFLTQLGQGEEQVARWLEAENDPRLNE IVSHLNHVVEEARIR >gi|299857054|gb|ADWS01000010.1| GENE 59 57117 - 57659 397 180 aa, chain - ## HITS:1 COG:ECs3576 KEGG:ns NR:ns ## COG: ECs3576 COG1143 # Protein_GI_number: 15832830 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Escherichia coli O157:H7 # 1 180 1 180 180 345 100.0 2e-95 MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETD LATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVC NRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKRQKCLVPSDRIELTRHMKEAI >gi|299857054|gb|ADWS01000010.1| GENE 60 57669 - 59378 2229 569 aa, chain - ## HITS:1 COG:ECs3577_2 KEGG:ns NR:ns ## COG: ECs3577_2 COG3261 # Protein_GI_number: 15832831 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III large subunit # Organism: Escherichia coli O157:H7 # 158 569 1 412 412 869 99.0 0 MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGWLSVL FGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWGEREVRD MYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTTDAETYEFINELGDKKNN VVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRV CGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSG FMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELV DVLLSTPNMEHRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVH SEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTYIPHRFALGFAEAPRGD DIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTV VDVRKKKSKVVPYKELERYSIERKNSPLK >gi|299857054|gb|ADWS01000010.1| GENE 61 59396 - 60319 1408 307 aa, chain - ## HITS:1 COG:hycD KEGG:ns NR:ns ## COG: hycD COG0650 # Protein_GI_number: 16130629 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 4 # Organism: Escherichia coli K12 # 1 307 1 307 307 535 100.0 1e-152 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDAS GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA FVSLLAA >gi|299857054|gb|ADWS01000010.1| GENE 62 60322 - 62148 1969 608 aa, chain - ## HITS:1 COG:ECs3579 KEGG:ns NR:ns ## COG: ECs3579 COG0651 # Protein_GI_number: 15832833 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 1 608 1 608 608 994 99.0 0 MSAISLINSGVAWFIAAAVLAFLFSFQKTLSGWIAGIGGAVGSLYTAAAGFTVLTGAVGV SGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHAQVKCNGLQINMLMAAAVC AVIASNLGMFVVMAEVMALCAVFLTSNSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLD LRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKI GLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIL LGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGG IGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGL AITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWLL PMLSAAVPLPLEPANTTVSQPMITLLLIACPLLPFIIMAICKGDRLPSRSRGAAWVCGYD HEKSMVITAHGFAMPVKQAFAPVLKLRKWLNPVSLVPGWQCEGSALLFRRMALVELAVLV VIIVSRGA >gi|299857054|gb|ADWS01000010.1| GENE 63 62145 - 62756 351 203 aa, chain - ## HITS:1 COG:ECs3580 KEGG:ns NR:ns ## COG: ECs3580 COG1142 # Protein_GI_number: 15832834 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli O157:H7 # 1 203 1 203 203 360 100.0 1e-100 MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCA VVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAP PAPARISTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKR ELTFNTDFGDLTLFQQAQSGEAK >gi|299857054|gb|ADWS01000010.1| GENE 64 62881 - 63342 424 153 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3263 NR:ns ## KEGG: ECO103_3263 # Name: hycA # Def: formate hydrogenlyase regulatory protein HycA # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 153 1 153 153 309 100.0 2e-83 MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHHAMSCAPDKELCFVLFE HFRIYVTLADGFNSHTIEYYVETKDGEDKQRIAQAQLSIDGMIDGKVNIRDREQVLEHYL EKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA >gi|299857054|gb|ADWS01000010.1| GENE 65 63554 - 63904 191 116 aa, chain + ## HITS:1 COG:ECs3582 KEGG:ns NR:ns ## COG: ECs3582 COG0375 # Protein_GI_number: 15832836 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Escherichia coli O157:H7 # 1 116 1 116 116 202 100.0 1e-52 MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSLAFCFDLVCRGSVAEGC KLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVADDGLQIRRIEIDQE >gi|299857054|gb|ADWS01000010.1| GENE 66 63908 - 64780 846 290 aa, chain + ## HITS:1 COG:hypB KEGG:ns NR:ns ## COG: hypB COG0378 # Protein_GI_number: 16130634 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Escherichia coli K12 # 1 290 1 290 290 596 99.0 1e-170 MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIKAPEFTPSQTEEGDLHY GHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTL LTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRL PLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKV DLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGIDQWLNWLETQRCA >gi|299857054|gb|ADWS01000010.1| GENE 67 64771 - 65043 341 90 aa, chain + ## HITS:1 COG:ECs3584 KEGG:ns NR:ns ## COG: ECs3584 COG0298 # Protein_GI_number: 15832838 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 174 100.0 3e-44 MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVIN EAEARDTLDALQNMFDVEPDVGALLYGEEK >gi|299857054|gb|ADWS01000010.1| GENE 68 65043 - 66164 1047 373 aa, chain + ## HITS:1 COG:hypD KEGG:ns NR:ns ## COG: hypD COG0409 # Protein_GI_number: 16130636 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 373 1 373 373 778 99.0 0 MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPEN VEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVR IVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIP TLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLV EQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQ RFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGAC AAWYQYRQQESEA >gi|299857054|gb|ADWS01000010.1| GENE 69 66161 - 67171 1129 336 aa, chain + ## HITS:1 COG:hypE KEGG:ns NR:ns ## COG: hypE COG0309 # Protein_GI_number: 16130637 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 15 336 1 322 322 605 99.0 1e-173 MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLELAQLVAEGDRLAFSTDSY VIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETA RAAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSGTLGDHG ATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGC GIEISEAALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDA ALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC >gi|299857054|gb|ADWS01000010.1| GENE 70 67260 - 69323 2209 687 aa, chain + ## HITS:1 COG:ECs3587 KEGG:ns NR:ns ## COG: ECs3587 COG3604 # Protein_GI_number: 15832841 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli O157:H7 # 1 687 6 692 692 1363 99.0 0 MSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALADNAAIVLWQAQTQRASYYASR EKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFCETWPQLAAGGLYPKFGHYCLMPL AAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIVSVVTEQIQSRVVNNVDYELLCRERD NFRILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDK QHPAHEQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFDTWGNQIQTLCLLPL MSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERLVDENL ALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNL SGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDM PLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVF PIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVI ERAVLLTRGNVLQLSLPDIVLPEPETPPAATVVAQEGEDEYQLIVRVLKETNGVVAGPKG AAQRLGLKRTTLLSRMKRLGIDKSALI >gi|299857054|gb|ADWS01000010.1| GENE 71 69360 - 69713 317 117 aa, chain - ## HITS:1 COG:no KEGG:SSON_2879 NR:ns ## KEGG: SSON_2879 # Name: ygbA # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 117 1 117 117 197 100.0 1e-49 MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQC PVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPRE >gi|299857054|gb|ADWS01000010.1| GENE 72 69770 - 70003 82 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300922251|ref|ZP_07138377.1| ## NR: gi|300922251|ref|ZP_07138377.1| conserved domain protein [Escherichia coli MS 182-1] # 1 77 1 77 77 142 98.0 7e-33 MALKEEVYSTDAILRTCFISITQKLQNSIFPGTSIKNSPFASSPEMINSGIMCALCDYNE NKNHHTPFNIREPDITP >gi|299857054|gb|ADWS01000010.1| GENE 73 70000 - 72561 3272 853 aa, chain + ## HITS:1 COG:ECs3589 KEGG:ns NR:ns ## COG: ECs3589 COG0249 # Protein_GI_number: 15832843 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Escherichia coli O157:H7 # 1 853 1 853 853 1614 99.0 0 MSAIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGA SAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTIS DEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLY AEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCL LQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVT PMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTAELQPVLRQVGDLERILARLALRTA RPRDLARMRHAFQQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLVR DGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISRG QSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLE ALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANP LNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAA DDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIK ALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAG VPKEVIKRARQKLRELESISPNATATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPR QALEWIYRLKSLV >gi|299857054|gb|ADWS01000010.1| GENE 74 72667 - 73323 365 218 aa, chain + ## HITS:1 COG:ECs3590 KEGG:ns NR:ns ## COG: ECs3590 COG0639 # Protein_GI_number: 15832844 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Escherichia coli O157:H7 # 1 218 1 218 218 439 98.0 1e-123 MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL DVLRLLNQPWFISVKGNHEAMALDAFATGDGNVWLASGGDWFFDLNDSEQKEATDLLLKF HHLPHIIEITNDNIKYVIAHADYPGSEYLFGKEIAESELLWPVDRVQKSLNGELQQINGA DYFIFGHMMFDNIQTFANQIYIDTGSPKSGRLSFYKIK >gi|299857054|gb|ADWS01000010.1| GENE 75 73374 - 74141 615 255 aa, chain - ## HITS:1 COG:ygbI KEGG:ns NR:ns ## COG: ygbI COG1349 # Protein_GI_number: 16130642 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 255 11 265 265 460 98.0 1e-130 MIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGGVQSPG RVAHEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVV TNDFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRG ISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASR ALAKQDLSLLVAKNE >gi|299857054|gb|ADWS01000010.1| GENE 76 74337 - 75245 822 302 aa, chain + ## HITS:1 COG:ygbJ KEGG:ns NR:ns ## COG: ygbJ COG2084 # Protein_GI_number: 16130643 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli K12 # 1 302 1 302 302 493 99.0 1e-139 MKTGSEFHVGIVGLGSMGMGAALSCVRAGLSTWGADLNSNACATLKEAGACGVSDNAATF AEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSSTIASADAQEIATALAGFDL EMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKII HQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSA VDIFVKDLGLVADTAKALHFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGITLPGA KS >gi|299857054|gb|ADWS01000010.1| GENE 77 75242 - 76504 980 420 aa, chain + ## HITS:1 COG:ygbK KEGG:ns NR:ns ## COG: ygbK COG3395 # Protein_GI_number: 16130644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 385 1 385 388 734 98.0 0 MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAIDALVISLKTRSCPVVEA TQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVFSPALPVN GRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEAQSTGRCGVVSAHVFEQGVDA VRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPLVTGGSGLAIGLARQWAQENGNQ AREAGHPLAGRGVVLSGSCSQMTNRQVAHYRQIAPAREVDVARCLSTETLAAYAHELAEW VLGQESVLAPLVFATASTDALAAIQQQYGAQKASQAVETLFSQLAARLAAEGVTRFIVAG GETSGVVTQSLGIKGFHIGPTISPGVPWVNALDKPVSLALKSGNFGDEAFFSRAQREFLS >gi|299857054|gb|ADWS01000010.1| GENE 78 76501 - 77139 454 212 aa, chain + ## HITS:1 COG:ygbL KEGG:ns NR:ns ## COG: ygbL COG0235 # Protein_GI_number: 16130645 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 212 1 212 212 432 100.0 1e-121 MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQR LSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCLQGLDSSNVIR PFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANN MEELEETAKLIFILGDRPIRYLTAGEIAELRS >gi|299857054|gb|ADWS01000010.1| GENE 79 77144 - 77920 691 258 aa, chain + ## HITS:1 COG:ygbM KEGG:ns NR:ns ## COG: ygbM COG3622 # Protein_GI_number: 16130646 # Func_class: G Carbohydrate transport and metabolism # Function: Hydroxypyruvate isomerase # Organism: Escherichia coli K12 # 1 258 1 258 258 528 99.0 1e-150 MPRFAANLSMMFTEVPFIERFAAARKAGFDAVEFLFPYDYSTLQIQKQLEQNHLTLALFN TAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRA VFIDNLRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEVARDNVFIQLDTF HAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGEINYPWLFRLFDEVGYQGWIGCE YKPRGLTEEGLGWFDAWR >gi|299857054|gb|ADWS01000010.1| GENE 80 78009 - 79373 1237 454 aa, chain + ## HITS:1 COG:ygbN KEGG:ns NR:ns ## COG: ygbN COG2610 # Protein_GI_number: 16130647 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 454 1 454 454 686 99.0 0 MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGG VLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDV GFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPHPGPVAAAGLLHADIGWLTI IGIAISIPVGIVGYFAAKIINKHQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALV TSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSL QHTSDIMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISL ALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAACFGGLGASHINDSGFWIVTKY LGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI >gi|299857054|gb|ADWS01000010.1| GENE 81 79412 - 79648 297 78 aa, chain - ## HITS:1 COG:no KEGG:ECO111_3461 NR:ns ## KEGG: ECO111_3461 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 78 1 78 78 145 100.0 4e-34 MICPRCADEQIEVMAKSPVKDVWTVYQCQHCLYTWRDTEPLRRTSREHYPEAFRMTQKDI DDAPMVPSIPPLLVEGKR >gi|299857054|gb|ADWS01000010.1| GENE 82 79659 - 80651 1222 330 aa, chain - ## HITS:1 COG:ECs3592 KEGG:ns NR:ns ## COG: ECs3592 COG0043 # Protein_GI_number: 15832846 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Escherichia coli O157:H7 # 1 330 146 475 475 665 99.0 0 MVSRDPLDPDNFGKQNVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITL GNDPIITLMGATPLKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRK REIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTRPIFESLYLGMPWTEIDYLMGPATCVPL YQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVD EDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPD NRGHYSQPVVDLPETKAWAEKLTAMLAARK >gi|299857054|gb|ADWS01000010.1| GENE 83 80690 - 81085 188 131 aa, chain - ## HITS:1 COG:ECs3592 KEGG:ns NR:ns ## COG: ECs3592 COG0043 # Protein_GI_number: 15832846 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Escherichia coli O157:H7 # 1 89 1 89 475 181 96.0 3e-46 MAFDDLRSFLQALDDHGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDA RVAMNTIGSWQNHAISLGLPPNTPVKSRLMSLSAAGRTSRLPRSAAPIQPGRRTPSMAKR STCSIFCRCFV >gi|299857054|gb|ADWS01000010.1| GENE 84 81085 - 81678 464 197 aa, chain - ## HITS:1 COG:ECs3593 KEGG:ns NR:ns ## COG: ECs3593 COG0163 # Protein_GI_number: 15832847 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 381 98.0 1e-106 MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADF SHNPADQAAIISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLV PREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHA RRWQGLPQARNFSQENE >gi|299857054|gb|ADWS01000010.1| GENE 85 81825 - 82232 273 135 aa, chain + ## HITS:1 COG:Z4048 KEGG:ns NR:ns ## COG: Z4048 COG1846 # Protein_GI_number: 15803257 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 EDL933 # 1 134 12 145 146 233 97.0 7e-62 MALRNKAFHQLRQLFQQHTARWQHELPDLTKPQYAVMRAIADKPGIEQVALIEAAVSTKA TLAEMLARMENRGLVRREHDPADKRRRFVWLTAEGEKILAAAIPIGDSVDEEFLGRLSGE EQELFMQLVRKMMNA >gi|299857054|gb|ADWS01000010.1| GENE 86 82353 - 83345 1097 330 aa, chain - ## HITS:1 COG:ECs3595 KEGG:ns NR:ns ## COG: ECs3595 COG0568 # Protein_GI_number: 15832849 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 576 100.0 1e-164 MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE RVRQIQVEGLRRLREILQTQGLNIEALFRE >gi|299857054|gb|ADWS01000010.1| GENE 87 83408 - 84547 667 379 aa, chain - ## HITS:1 COG:ECs3596 KEGG:ns NR:ns ## COG: ECs3596 COG0739 # Protein_GI_number: 15832850 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli O157:H7 # 1 379 1 379 379 553 99.0 1e-157 MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAPANTNSGMLITPPPKMG TTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSYSG STYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGGNAIT QADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPAATTVTAPVTVPT ASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAIIATADGRV VYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSSTRLH FEIRYKGKSVNPLRYLPQR >gi|299857054|gb|ADWS01000010.1| GENE 88 84687 - 85313 544 208 aa, chain - ## HITS:1 COG:ECs3597 KEGG:ns NR:ns ## COG: ECs3597 COG2518 # Protein_GI_number: 15832851 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-L-isoaspartate carboxylmethyltransferase # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 397 100.0 1e-111 MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQ PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNL DLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEEHQYLK RVRRRGGEFIIDTVEAVRFVPLVKGELA >gi|299857054|gb|ADWS01000010.1| GENE 89 85307 - 86068 682 253 aa, chain - ## HITS:1 COG:ECs3598 KEGG:ns NR:ns ## COG: ECs3598 COG0496 # Protein_GI_number: 15832852 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 505 100.0 1e-143 MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGD IAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA LAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRH PADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV SDWLNSVGVGTQW >gi|299857054|gb|ADWS01000010.1| GENE 90 86049 - 87098 1008 349 aa, chain - ## HITS:1 COG:ygbO KEGG:ns NR:ns ## COG: ygbO COG0585 # Protein_GI_number: 16130652 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 349 1 349 349 696 100.0 0 MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRK LRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQ TNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEE LAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRA MLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE >gi|299857054|gb|ADWS01000010.1| GENE 91 87095 - 87574 786 159 aa, chain - ## HITS:1 COG:ECs3600 KEGG:ns NR:ns ## COG: ECs3600 COG0245 # Protein_GI_number: 15832854 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 288 100.0 3e-78 MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL FPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDL GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK >gi|299857054|gb|ADWS01000010.1| GENE 92 87574 - 88284 315 236 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 10 227 6 223 234 125 37 9e-28 MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISP GDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARL LALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTR ALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT >gi|299857054|gb|ADWS01000010.1| GENE 93 88303 - 88614 223 103 aa, chain - ## HITS:1 COG:ECs3602 KEGG:ns NR:ns ## COG: ECs3602 COG2919 # Protein_GI_number: 15832856 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Escherichia coli O157:H7 # 16 103 16 103 103 164 100.0 4e-41 MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDL NGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR >gi|299857054|gb|ADWS01000010.1| GENE 94 88808 - 89131 480 107 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_2875 NR:ns ## KEGG: EcSMS35_2875 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 107 1 107 107 176 100.0 2e-43 MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPF FLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG >gi|299857054|gb|ADWS01000010.1| GENE 95 89181 - 89786 585 201 aa, chain - ## HITS:1 COG:ECs3604 KEGG:ns NR:ns ## COG: ECs3604 COG0529 # Protein_GI_number: 15832858 # Func_class: P Inorganic ion transport and metabolism # Function: Adenylylsulfate kinase and related kinases # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 397 100.0 1e-111 MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTY LLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRE RVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQ LVTNLVQQLLDLLRQNDIIRS >gi|299857054|gb|ADWS01000010.1| GENE 96 89786 - 91213 1647 475 aa, chain - ## HITS:1 COG:cysN KEGG:ns NR:ns ## COG: cysN COG2895 # Protein_GI_number: 16130658 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Escherichia coli K12 # 1 475 1 475 475 933 98.0 0 MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLS SLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQY TRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETF TRIREDYLTFAEQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRV VDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDRE EAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIA GKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIF IDRLSNVTVGAGMVHEPKNEAAVASSEFSAFELELNALVRRHFPHWGARDLLGDK >gi|299857054|gb|ADWS01000010.1| GENE 97 91215 - 92123 1007 302 aa, chain - ## HITS:1 COG:cysD KEGG:ns NR:ns ## COG: cysD COG0175 # Protein_GI_number: 16130659 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Escherichia coli K12 # 1 302 1 302 302 626 100.0 1e-179 MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPL LHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLK QALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGES IRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIK KRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQG YF >gi|299857054|gb|ADWS01000010.1| GENE 98 92375 - 93412 613 345 aa, chain + ## HITS:1 COG:iap KEGG:ns NR:ns ## COG: iap COG2234 # Protein_GI_number: 16130660 # Func_class: R General function prediction only # Function: Predicted aminopeptidases # Organism: Escherichia coli K12 # 1 345 1 345 345 701 99.0 0 MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADY IRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDT YAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKL GAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHG IAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTPAFPA GNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS >gi|299857054|gb|ADWS01000010.1| GENE 99 94292 - 94585 170 97 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_4007 NR:ns ## KEGG: ECH74115_4007 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 97 1 97 97 186 100.0 2e-46 MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAW ATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ >gi|299857054|gb|ADWS01000010.1| GENE 100 94585 - 95457 498 290 aa, chain - ## HITS:1 COG:ECs3609 KEGG:ns NR:ns ## COG: ECs3609 COG1518 # Protein_GI_number: 15832863 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Escherichia coli O157:H7 # 1 290 17 306 307 565 98.0 1e-161 MIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLV WVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPQPARRSVEQ LRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVL AAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFR STKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRG >gi|299857054|gb|ADWS01000010.1| GENE 101 95502 - 96152 323 216 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3298 NR:ns ## KEGG: ECO103_3298 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 216 1 216 216 426 100.0 1e-118 MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFV LSQERPAESDTFTIECRSFAPELCTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQA EGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGM LTVTDPGLFVQRLSQGYGKSRAFGCGLMLIKPGAEA >gi|299857054|gb|ADWS01000010.1| GENE 102 96134 - 96880 487 248 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_2860 NR:ns ## KEGG: ECIAI1_2860 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 248 1 248 248 477 99.0 1e-133 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH YSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWM VAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQY QDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSK EEPCTSQE >gi|299857054|gb|ADWS01000010.1| GENE 103 96891 - 97667 816 258 aa, chain - ## HITS:1 COG:no KEGG:ECSE_3013 NR:ns ## KEGG: ECSE_3013 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 5 258 98 351 351 481 98.0 1e-135 MQIILGKLKTTKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLR KDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGA GHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFAS RAYASWALAEKGTDQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTDYASF DVMNKQGSMKDVLDFICA >gi|299857054|gb|ADWS01000010.1| GENE 104 97609 - 97947 385 112 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3060 NR:ns ## KEGG: EcE24377A_3060 # Name: cse4 # Def: CRISPR-associated CSE4 family protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 108 1 108 351 200 99.0 1e-50 MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAG HIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKTKRSAH >gi|299857054|gb|ADWS01000010.1| GENE 105 97959 - 98495 409 178 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3032 NR:ns ## KEGG: EC55989_3032 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 178 1 178 178 320 100.0 1e-86 MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPE WRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRL LNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ >gi|299857054|gb|ADWS01000010.1| GENE 106 98492 - 100054 1027 520 aa, chain - ## HITS:1 COG:no KEGG:ECSE_3015 NR:ns ## KEGG: ECSE_3015 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 520 1 520 520 1056 99.0 0 MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAVWQFLLGLLQTSF APKDHRRWDDIWEDGLEAEKLREALQSLEHAFQFGPASPSFMQDFEALKGDKVQVASLLP EIPGAQTTKFNKDHFIKRGVTEHVCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTL IELQEYQGNQQTPLWRKLWPNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTHD QVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPY RIPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGL WGFGYDFDNMKARCWYEHHFPLLLKKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDP KGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFT NPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE >gi|299857054|gb|ADWS01000010.1| GENE 107 100152 - 102851 1489 899 aa, chain - ## HITS:1 COG:ZygcB KEGG:ns NR:ns ## COG: ZygcB COG1203 # Protein_GI_number: 15803278 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Escherichia coli O157:H7 EDL933 # 1 898 1 898 899 1758 94.0 0 MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGL ADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHS TLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPED KAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRV AHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQ QGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAF YSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLA EIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGN SVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKD VERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSL FHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDL LIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYP DHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMA KKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVR VRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG >gi|299857054|gb|ADWS01000010.1| GENE 108 103046 - 103198 134 50 aa, chain - ## HITS:1 COG:no KEGG:G2583_3410 NR:ns ## KEGG: G2583_3410 # Name: small # Def: small toxic membrane polypeptide # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 50 46 95 95 91 98.0 1e-17 MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK >gi|299857054|gb|ADWS01000010.1| GENE 109 103463 - 104197 920 244 aa, chain - ## HITS:1 COG:cysH KEGG:ns NR:ns ## COG: cysH COG0175 # Protein_GI_number: 16130669 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Escherichia coli K12 # 1 244 1 244 244 491 99.0 1e-139 MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAV SLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKL WEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVL PIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECG LHEG >gi|299857054|gb|ADWS01000010.1| GENE 110 104271 - 105983 1887 570 aa, chain - ## HITS:1 COG:ECs3618 KEGG:ns NR:ns ## COG: ECs3618 COG0155 # Protein_GI_number: 15832872 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Escherichia coli O157:H7 # 1 570 1 570 570 1182 99.0 0 MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQ DDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTF QFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEH LLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAI AENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRT DRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTL FIENGRILDYPGRPLKTGLLEIAKIHKGAFRITANQNLIIAGVPESEKAKIEKIAKESGL MNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCP NGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAK EREAGEGFGDFTVRAGIIRPVLDPARDLWD >gi|299857054|gb|ADWS01000010.1| GENE 111 105983 - 107782 1759 599 aa, chain - ## HITS:1 COG:cysJ KEGG:ns NR:ns ## COG: cysJ COG0369 # Protein_GI_number: 16130671 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Escherichia coli K12 # 1 599 1 599 599 1155 99.0 0 MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAE MPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQG EGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERL LDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGAVNEIHSSPYSKDAPLVAS LSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDE PVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPI VDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGG ASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAP GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELW RWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY >gi|299857054|gb|ADWS01000010.1| GENE 112 108101 - 108463 362 120 aa, chain + ## HITS:1 COG:ECs3620 KEGG:ns NR:ns ## COG: ECs3620 COG0720 # Protein_GI_number: 15832874 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Escherichia coli O157:H7 # 1 120 2 121 121 251 100.0 2e-67 MSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAA FKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE >gi|299857054|gb|ADWS01000010.1| GENE 113 108503 - 109057 419 184 aa, chain + ## HITS:1 COG:ygcE KEGG:ns NR:ns ## COG: ygcE COG1070 # Protein_GI_number: 16130683 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 34 184 342 492 492 301 96.0 3e-82 MLGCCVQDIWGMTWKTTATLLLLVPVLQAPLARYAWIYRSILESVALMLKNNYDNMRNEM NHFAKHVIITGGGSNSDLFMQIFADMFNLPARRNAINGCASLGAAINKAVGLGLYPDYAT AVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHNDVILKKSYEVMHGELGNVDSIQS WSNA >gi|299857054|gb|ADWS01000010.1| GENE 114 110613 - 111284 218 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel] # 5 222 20 224 225 88 30 2e-16 MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAK TKESDKWGSASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETS GTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLTD DKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA >gi|299857054|gb|ADWS01000010.1| GENE 115 111457 - 112059 379 200 aa, chain + ## HITS:1 COG:Z4090 KEGG:ns NR:ns ## COG: Z4090 COG1704 # Protein_GI_number: 15803296 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 37 200 1 164 164 270 95.0 2e-72 MLRTFIVIIFIFNLSGCGYNDIQTYDEQVNASWSEVLNQYQRRADLIPNLVASIKGYSNH EKDVLEAVTLARSQANRASSDLQQTPGNEQKLQAWQQAQAQVIRTLGQLTIISERYPELK AQELYQNLMVQLEGSENRIAVARGRYIKAIEQYNVTIRKFPAVLTAKVMDYTPKKNYLPD DVAAVSKAPTIDFSQNASAH >gi|299857054|gb|ADWS01000010.1| GENE 116 112073 - 112978 222 301 aa, chain + ## HITS:1 COG:ECs3635 KEGG:ns NR:ns ## COG: ECs3635 COG1512 # Protein_GI_number: 15832889 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Escherichia coli O157:H7 # 1 224 1 224 224 367 79.0 1e-101 MKNLILLLVLICSSAFAVQVPVPEFAKYINDLTGTLTREEVSTLTSQIKTLTQKSHAQLI VLVVETTGDETIEQYATRVFERWQPGHKNLDDGILLVVAWQDHTVHIEIGYGLEGILTDA QSGQIIRNSIIPAFKKGDLAVGLQQGIGDIETRLSENDLVNNTSPDHPLPFSGWWALLVW AIVLTFISARGYVKTLGVICFAAIILAFVLPIAGYSGSWGVLATLLCFATPFLVVAIAFT PFGRKVRDSMRSANRPSRYERSNSASRHSSSSSSSSSSSFNNDNFSGGGGSSGGGGASGR W >gi|299857054|gb|ADWS01000010.1| GENE 117 113014 - 113376 148 120 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_2886 NR:ns ## KEGG: ECIAI1_2886 # Name: not_defined # Def: hypothetical protein; putative membrane protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 120 1 120 120 222 99.0 3e-57 MSKILANHPRLSKFVFGLFGAAGMIWLNKAFQGDELFQLITSLLALDTFVNFCIYSLINP IPEANDFLWDYKVHQRKYSSNISHNDFVSNVRNSRKIVRILILVGITFINVIALLTKLKM >gi|299857054|gb|ADWS01000010.1| GENE 118 113432 - 114730 1565 432 aa, chain - ## HITS:1 COG:ECs3639 KEGG:ns NR:ns ## COG: ECs3639 COG0148 # Protein_GI_number: 15832893 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 760 100.0 0 MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFL GKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAK AAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVK EAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKD ITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDG FAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAK DAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKA PYNGRKEIKGQA >gi|299857054|gb|ADWS01000010.1| GENE 119 114818 - 116455 1650 545 aa, chain - ## HITS:1 COG:ECs3640 KEGG:ns NR:ns ## COG: ECs3640 COG0504 # Protein_GI_number: 15832894 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Escherichia coli O157:H7 # 1 545 1 545 545 1101 100.0 0 MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEV FVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHIT NAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYM AASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKD VDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIE LPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEG MITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWR DENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQ IEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQ KRQAK >gi|299857054|gb|ADWS01000010.1| GENE 120 116683 - 117474 985 263 aa, chain - ## HITS:1 COG:ECs3641 KEGG:ns NR:ns ## COG: ECs3641 COG1694 # Protein_GI_number: 15832895 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 478 100.0 1e-135 MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELG DLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKT EERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEA RQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLE MTGVDLETMEEVWQQVKRQEIDL >gi|299857054|gb|ADWS01000010.1| GENE 121 117545 - 117880 185 111 aa, chain - ## HITS:1 COG:ECs3642 KEGG:ns NR:ns ## COG: ECs3642 COG2337 # Protein_GI_number: 15832896 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 226 99.0 7e-60 MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPYTTQSKGYPF EVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG >gi|299857054|gb|ADWS01000010.1| GENE 122 117880 - 118128 280 82 aa, chain - ## HITS:1 COG:ECs3643 KEGG:ns NR:ns ## COG: ECs3643 COG2336 # Protein_GI_number: 15832897 # Func_class: T Signal transduction mechanisms # Function: Growth regulator # Organism: Escherichia coli O157:H7 # 1 82 1 82 82 148 100.0 2e-36 MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVN DITPENLHENIDWGEPKDKEVW >gi|299857054|gb|ADWS01000010.1| GENE 123 118206 - 120440 2418 744 aa, chain - ## HITS:1 COG:ECs3644 KEGG:ns NR:ns ## COG: ECs3644 COG0317 # Protein_GI_number: 15832898 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Escherichia coli O157:H7 # 1 744 1 744 744 1509 100.0 0 MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGV EMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLK ATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTN IYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEM KAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEG AAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPA GSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNL GYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVD ELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVE GVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGES YSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQ VLGRVLGKLNQVPDVIDARRLHGS >gi|299857054|gb|ADWS01000010.1| GENE 124 120488 - 121789 892 433 aa, chain - ## HITS:1 COG:ygcA KEGG:ns NR:ns ## COG: ygcA COG2265 # Protein_GI_number: 16130692 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 433 1 433 433 870 99.0 0 MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQ YARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVI ADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACL GSLQAIRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILE TVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNF TLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKV LLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHT GHLESMVLFSRVK >gi|299857054|gb|ADWS01000010.1| GENE 125 121846 - 124602 2466 918 aa, chain + ## HITS:1 COG:ECs3646_1 KEGG:ns NR:ns ## COG: ECs3646_1 COG0642 # Protein_GI_number: 15832900 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 531 1 531 531 1033 100.0 0 MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGM SLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQL TVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFIS SVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGI NSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANM SHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLI LESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNA IKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHG GTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLA YVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLA KAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPV TDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQ MPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL LLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEV RNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELL ELLDEMDNVAREASKILG >gi|299857054|gb|ADWS01000010.1| GENE 126 124834 - 126174 1671 446 aa, chain - ## HITS:1 COG:ZygcX KEGG:ns NR:ns ## COG: ZygcX COG4948 # Protein_GI_number: 15803308 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 446 1 446 446 927 99.0 0 MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEK IRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAM LDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGDRKATPLPYQSQPDDSCDWYRLRHE EAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAW SLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGH TLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPG KITAIDTHWIWQEGNQRLTKEPFEIKGGLVQVPEKPGLGVEVDMDQVMKAHELYQKHGLG ARDDAMGMQYLIPGWTFDNKRPCMVR >gi|299857054|gb|ADWS01000010.1| GENE 127 126195 - 127535 1290 446 aa, chain - ## HITS:1 COG:ygcY KEGG:ns NR:ns ## COG: ygcY COG4948 # Protein_GI_number: 16130695 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 446 1 446 446 898 98.0 0 MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGGEVI YQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALL DLLGKALNVPVCELLGPGKQRETITVLGYLFYIGDRTKTDLPYLENTPGNHEWYQLRHQK AMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRFPDARITVDPNGAWL LDEAISLCKGLNDVLTYAEEPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHA VMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGN PTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVPDAPGLGVELDWEQVQKAHEAYKRLPGGA RNDAGPMQYLIPGWTFDRKRPVFGRH >gi|299857054|gb|ADWS01000010.1| GENE 128 127537 - 128889 1461 450 aa, chain - ## HITS:1 COG:ygcZ KEGG:ns NR:ns ## COG: ygcZ COG0477 # Protein_GI_number: 16130696 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 450 1 450 450 817 99.0 0 MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYV FSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTL RFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWS HVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQKELEYIAAGGALINMDQQNTKVKVPFSV KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVC GFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAF FGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIY VGVHALIAVLSYLVLVGDIKRIELKPVAGQ >gi|299857054|gb|ADWS01000010.1| GENE 129 129324 - 129773 594 149 aa, chain - ## HITS:1 COG:ECs3650 KEGG:ns NR:ns ## COG: ECs3650 COG0716 # Protein_GI_number: 15832904 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 149 1 149 149 291 99.0 2e-79 MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTG QGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVG EILLIDASENPEPETESNPWVEQWGTLLS >gi|299857054|gb|ADWS01000010.1| GENE 130 129791 - 130573 193 260 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 3 219 82 276 287 79 27 1e-13 MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGV LLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDK GSQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSK HGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLL PENERVEFSAPSGQDGEISS >gi|299857054|gb|ADWS01000010.1| GENE 131 130573 - 130902 398 109 aa, chain - ## HITS:1 COG:yqcC KEGG:ns NR:ns ## COG: yqcC COG3098 # Protein_GI_number: 16130699 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 109 1 109 109 176 100.0 9e-45 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS >gi|299857054|gb|ADWS01000010.1| GENE 132 131524 - 132069 522 181 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3336 NR:ns ## KEGG: ECO103_3336 # Name: syd # Def: SecY interacting protein Syd # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 181 1 181 181 366 99.0 1e-100 MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIISTTEDAVYWQPQPFTGEQ NVNSVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQTWSEDDFRRVQENLIGHL VTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGTRKRTHLASNLAEFLNQLKPL L >gi|299857054|gb|ADWS01000010.1| GENE 133 132137 - 132985 526 282 aa, chain + ## HITS:1 COG:ECs3654_2 KEGG:ns NR:ns ## COG: ECs3654_2 COG0780 # Protein_GI_number: 15832908 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Escherichia coli O157:H7 # 137 282 1 146 146 304 99.0 1e-82 MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLY ELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLS TCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNYEFTTDYLENATSGEKVEEET LVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDL LRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ >gi|299857054|gb|ADWS01000010.1| GENE 134 133097 - 134461 1384 454 aa, chain + ## HITS:1 COG:ECs3655 KEGG:ns NR:ns ## COG: ECs3655 COG1611 # Protein_GI_number: 15832909 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Escherichia coli O157:H7 # 1 454 1 454 454 928 99.0 0 MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFEN FDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNL NLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRELN ICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEK RLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLD EFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQ MPFEPSHENMANLKLCPDQPVEVLAADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDK EIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICT >gi|299857054|gb|ADWS01000010.1| GENE 135 135018 - 136307 1469 429 aa, chain + ## HITS:1 COG:ECs3656 KEGG:ns NR:ns ## COG: ECs3656 COG0814 # Protein_GI_number: 15832910 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 429 1 429 429 733 100.0 0 METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILA FPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAI TNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLA LYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYG DMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPV IAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINKLNRITALFMLVTT WIVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVVMGLIAI SAIFYSLFS >gi|299857054|gb|ADWS01000010.1| GENE 136 136365 - 137732 1465 455 aa, chain + ## HITS:1 COG:sdaB KEGG:ns NR:ns ## COG: sdaB COG1760 # Protein_GI_number: 16130704 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli K12 # 1 455 1 455 455 908 99.0 0 MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTRVVVDVYGSLSLTGKGH HTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQHEVEFPVDQCMNFHADNL SLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQNSAPVEVPYPYSSAADLQKH CQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRGGIERGISTEGVLPGKLRVPRRA AALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENAAGGRVVTAPTNGACGIIPAVLAYY DKFIREVNANSLARYLLVASAIGSLYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGA SPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPCIERNAIAAVKAVNAARMALRRTSEPRVC LDKVIETMYETGKDMNAKYRETSRGGLAMKIVACD >gi|299857054|gb|ADWS01000010.1| GENE 137 137844 - 138599 502 251 aa, chain + ## HITS:1 COG:exo KEGG:ns NR:ns ## COG: exo COG0258 # Protein_GI_number: 16130705 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Escherichia coli K12 # 1 251 31 281 281 519 99.0 1e-147 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRH QRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQ ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI DGNLQQLRLVR >gi|299857054|gb|ADWS01000010.1| GENE 138 138654 - 139802 1190 382 aa, chain - ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 382 2 383 383 745 100.0 0 MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLA WAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRS LEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADM MDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAGDKDAGE EMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYR DIARVMGVKVEGMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDV CTGGNPREATLEDIVELYHTAW >gi|299857054|gb|ADWS01000010.1| GENE 139 139830 - 140477 670 215 aa, chain - ## HITS:1 COG:ECs3660 KEGG:ns NR:ns ## COG: ECs3660 COG0235 # Protein_GI_number: 15832914 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 432 100.0 1e-121 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGIPYEKLTESHIVFIDG NGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRPIPAIHYMIAAAGG NSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQL YLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE >gi|299857054|gb|ADWS01000010.1| GENE 140 141024 - 142340 878 438 aa, chain + ## HITS:1 COG:fucP KEGG:ns NR:ns ## COG: fucP COG0738 # Protein_GI_number: 16130708 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Escherichia coli K12 # 1 438 1 438 438 808 100.0 0 MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTN FQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLF LVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSN VPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANY LTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAF MSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPAL CFAVIFIFARFRSQTATN >gi|299857054|gb|ADWS01000010.1| GENE 141 142373 - 144148 1815 591 aa, chain + ## HITS:1 COG:fucI KEGG:ns NR:ns ## COG: fucI COG2407 # Protein_GI_number: 16130709 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Escherichia coli K12 # 1 591 1 591 591 1222 100.0 0 MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDT CIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVY LAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAVASMKGKSYLSL GGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFRY GEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQ GQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGTAQVFA DVRTYWSPEAIERVTGHKLDGLAEHGIIHLINSGSAALDGSCKQRDSEGNPTMKPHWEIS QQEADACLAATEWCPAIHEYFRGGGYSSRFLTEGGVPFTMTRVNIIKGLGPVLQIAEGWS VELPKDVHDILNKRTNSTWPTTWFAPRLTGKGPFTDVYSVMANWGANHGVLTIGHVGADF ITLASMLRIPVCMHNVEETKVYRPSAWAAHGMDIEGQDYRACQNYGPLYKR >gi|299857054|gb|ADWS01000010.1| GENE 142 144227 - 145675 998 482 aa, chain + ## HITS:1 COG:fucK KEGG:ns NR:ns ## COG: fucK COG1070 # Protein_GI_number: 16130710 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 482 1 482 482 976 99.0 0 MLSGYIAGAIMKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENNTWHQWS LDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISWKCPRTAAV MDNIEQLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERAHAWLFISSLINHRLTG EFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIGTLQNSAAAMLGL PVGIPVISAGHDTQFALFGAGADQNEPVLSSGTWEILMVRSAQVDTSLLSQYAGSTCELD SQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAPGADGVKMQCDLLSCQN AGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKASELLLVGGGSRNTLWNQI KANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEARAQIHYQYRYFYPQTEPEFIE EV >gi|299857054|gb|ADWS01000010.1| GENE 143 145677 - 146099 395 140 aa, chain + ## HITS:1 COG:ECs3664 KEGG:ns NR:ns ## COG: ECs3664 COG4154 # Protein_GI_number: 15832918 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose dissimilation pathway protein FucU # Organism: Escherichia coli O157:H7 # 1 140 1 140 140 268 100.0 2e-72 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI VITGERAKYGNILLKKGVTP >gi|299857054|gb|ADWS01000010.1| GENE 144 146157 - 146888 527 243 aa, chain + ## HITS:1 COG:fucR KEGG:ns NR:ns ## COG: fucR COG1349 # Protein_GI_number: 16130712 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 243 1 243 243 471 100.0 1e-133 MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGRAKYIHR QNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDASSTCWYLARQLPDINIQVF TNSHPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQLKSLEIDLFIFSCEGIDSSG ALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEARIGHLDEVTHIISDERQVATSL VTA >gi|299857054|gb|ADWS01000010.1| GENE 145 146932 - 148032 1152 366 aa, chain - ## HITS:1 COG:ECs3666 KEGG:ns NR:ns ## COG: ECs3666 COG2933 # Protein_GI_number: 15832920 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 780 100.0 0 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELLKFC RKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKF PADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVD NGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRE TIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRIWAAVG GRRDER >gi|299857054|gb|ADWS01000010.1| GENE 146 148025 - 148420 470 131 aa, chain - ## HITS:1 COG:ECs3667 KEGG:ns NR:ns ## COG: ECs3667 COG2363 # Protein_GI_number: 15832921 # Func_class: S Function unknown # Function: Uncharacterized small membrane protein # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 204 100.0 3e-53 MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGLEYQAFHTLAILGLAVA MQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVTPVGGVSFLAGWALMLVGA IRLKRKGVSHE >gi|299857054|gb|ADWS01000010.1| GENE 147 148439 - 149356 649 305 aa, chain - ## HITS:1 COG:ECs3668 KEGG:ns NR:ns ## COG: ECs3668 COG0583 # Protein_GI_number: 15832922 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 604 100.0 1e-173 MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL LLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAY PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPL KTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALAN NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFR FRYEQ >gi|299857054|gb|ADWS01000010.1| GENE 148 149707 - 149934 356 75 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_2919 NR:ns ## KEGG: ECIAI1_2919 # Name: ygdI # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 75 1 75 75 129 100.0 3e-29 MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQ QINRTDVKEMVELDQ >gi|299857054|gb|ADWS01000010.1| GENE 149 150126 - 151331 1004 401 aa, chain + ## HITS:1 COG:csdA KEGG:ns NR:ns ## COG: csdA COG0520 # Protein_GI_number: 16130717 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Escherichia coli K12 # 1 401 1 401 401 788 99.0 0 MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYSLSAGNVHRSQFAEAQR LTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYARPRLQPGDEIIVSVAEHH ANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPRSRILALGQMSNVTGGCPDLA RAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAFSGHKLYGPTGIGVLYGKSELLE AMSPWLGGGKMIHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADYDINQAESW SRSLATLAEEALAKRPGFRSFRCQDSSLLAFDFAGVHHSDMVTLLAEYGIALRAGQHCAQ PLLAELGVTGTLRASFAPYNTKSDVDALVNAVDRALELLVD >gi|299857054|gb|ADWS01000010.1| GENE 150 151331 - 151774 426 147 aa, chain + ## HITS:1 COG:ECs3671 KEGG:ns NR:ns ## COG: ECs3671 COG2166 # Protein_GI_number: 15832925 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 271 97.0 3e-73 MTNPQFAGHPFGTTVTAETLRNTFAPLSQWEDKYRQLIMLGKQLPALPDELKAQAKEIAG CENRVWLGYTVTENGKMHFFGDSEGRIVRGLLAVLLTAVEGKTAAELQAQSPLALFDELG LRAQLSASRSQGLNALSEAIIAAAKQV >gi|299857054|gb|ADWS01000010.1| GENE 151 151825 - 152631 832 268 aa, chain - ## HITS:1 COG:ygdL KEGG:ns NR:ns ## COG: ygdL COG1179 # Protein_GI_number: 16130719 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Escherichia coli K12 # 1 268 1 268 268 515 100.0 1e-146 MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI DMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSV GYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGA ATMVTATFGFVAVSHALKKMMAKAARQG >gi|299857054|gb|ADWS01000010.1| GENE 152 152708 - 152857 64 49 aa, chain - ## HITS:1 COG:ECs3673 KEGG:ns NR:ns ## COG: ECs3673 COG2821 # Protein_GI_number: 15832927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Escherichia coli O157:H7 # 1 49 317 365 365 103 100.0 8e-23 DVGGAIKGQHFDIYQGIGPEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG Prediction of potential genes in microbial genomes Time: Sun May 15 22:07:38 2011 Seq name: gi|299857053|gb|ADWS01000011.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont10.1, whole genome shotgun sequence Length of sequence - 140642 bp Number of predicted genes - 134, with homology - 130 Number of transcription units - 64, operones - 27 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 7/0.095 + CDS 1 - 852 504 ## COG2116 Formate/nitrite family of transporters 2 1 Op 2 11/0.000 + CDS 907 - 3189 2587 ## COG1882 Pyruvate-formate lyase + Term 3232 - 3263 3.2 + Prom 3239 - 3298 2.9 3 1 Op 3 . + CDS 3381 - 4121 668 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 4129 - 4173 7.3 - Term 4023 - 4057 1.1 4 2 Tu 1 . - CDS 4203 - 4793 390 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 4818 - 4877 3.2 + Prom 4793 - 4852 2.6 5 3 Tu 1 . + CDS 4893 - 5801 448 ## COG0583 Transcriptional regulator - Term 5657 - 5688 -0.1 6 4 Tu 1 . - CDS 5802 - 7232 1464 ## COG0531 Amino acid transporters - Prom 7316 - 7375 9.1 - Term 7388 - 7431 8.5 7 5 Tu 1 . - CDS 7442 - 8590 851 ## COG0477 Permeases of the major facilitator superfamily - Prom 8620 - 8679 3.8 + Prom 8690 - 8749 4.4 8 6 Tu 1 . + CDS 8905 - 9531 606 ## COG1335 Amidases related to nicotinamidase + Term 9539 - 9568 1.1 - Term 9526 - 9556 2.1 9 7 Op 1 9/0.000 - CDS 9567 - 10430 822 ## COG3302 DMSO reductase anchor subunit 10 7 Op 2 16/0.000 - CDS 10432 - 11049 547 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 11 7 Op 3 2/0.667 - CDS 11060 - 13504 2384 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 13553 - 13612 4.6 - Term 13692 - 13717 -0.5 12 8 Op 1 8/0.000 - CDS 13743 - 15035 1642 ## COG0172 Seryl-tRNA synthetase - Term 15094 - 15125 -1.0 13 8 Op 2 8/0.000 - CDS 15126 - 16469 1043 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 14 8 Op 3 10/0.000 - CDS 16480 - 17091 674 ## COG2834 Outer membrane lipoprotein-sorting protein 15 8 Op 4 7/0.095 - CDS 17246 - 21313 3930 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Term 21348 - 21391 9.2 16 9 Tu 1 . - CDS 21448 - 21942 519 ## COG1522 Transcriptional regulators + Prom 22398 - 22457 5.8 17 10 Op 1 8/0.000 + CDS 22486 - 23451 733 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 23478 - 23522 8.0 + Prom 23479 - 23538 6.1 18 10 Op 2 14/0.000 + CDS 23574 - 25340 170 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 19 10 Op 3 5/0.238 + CDS 25341 - 27062 1496 ## COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 20 10 Op 4 5/0.238 + CDS 27104 - 27808 341 ## COG2360 Leu/Phe-tRNA-protein transferase + Term 27997 - 28033 -1.0 + Prom 27998 - 28057 3.7 21 11 Tu 1 . + CDS 28093 - 28311 257 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 + Term 28345 - 28391 5.5 + TRNA 29874 - 29961 66.3 # Ser GGA 0 0 - Term 29976 - 30037 5.1 22 12 Op 1 . - CDS 30073 - 30627 389 ## LF82_p093 hypothetical protein 23 12 Op 2 . - CDS 30638 - 31639 1019 ## ECS88_0910 conserved hypothetical protein CRISPR-associated 24 12 Op 3 . - CDS 31650 - 32573 658 ## ECED1_0853 conserved hypothetical protein CRISPR-associated 25 12 Op 4 . - CDS 32570 - 33877 622 ## ECED1_0852 conserved hypothetical protein CRISPR-associated - Prom 34065 - 34124 5.2 26 13 Tu 1 . - CDS 34208 - 37234 1329 ## COG1203 Predicted helicases - Prom 37301 - 37360 3.3 27 14 Tu 1 . - CDS 37438 - 38421 807 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair - Prom 38501 - 38560 3.5 - Term 39549 - 39588 8.4 28 15 Op 1 19/0.000 - CDS 39614 - 41890 1361 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 29 15 Op 2 . - CDS 41921 - 42241 312 ## COG2127 Uncharacterized conserved protein - Prom 42307 - 42366 1.8 30 16 Tu 1 . - CDS 42411 - 42653 96 ## - Prom 42702 - 42761 2.2 + Prom 42417 - 42476 4.5 31 17 Tu 1 . + CDS 42564 - 42788 226 ## COG1278 Cold shock proteins + Term 42825 - 42858 4.1 - Term 42806 - 42851 7.1 32 18 Op 1 13/0.000 - CDS 42861 - 44807 368 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 33 18 Op 2 . - CDS 44804 - 45919 1169 ## COG0845 Membrane-fusion protein + Prom 45976 - 46035 2.8 34 19 Tu 1 . + CDS 46076 - 47026 630 ## COG2990 Uncharacterized protein conserved in bacteria + Term 47143 - 47184 0.2 - Term 46994 - 47022 -0.6 35 20 Tu 1 . - CDS 47023 - 48681 1053 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family - Prom 48852 - 48911 7.5 + Prom 48805 - 48864 8.2 36 21 Tu 1 . + CDS 49107 - 49802 747 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 49803 - 49856 9.6 + Prom 50094 - 50153 3.4 37 22 Tu 1 . + CDS 50297 - 51196 775 ## COG2431 Predicted membrane protein + Prom 51248 - 51307 4.8 38 23 Op 1 2/0.667 + CDS 51340 - 52992 1950 ## COG1151 6Fe-6S prismane cluster-containing protein 39 23 Op 2 5/0.238 + CDS 53004 - 53972 896 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Term 53982 - 54021 5.0 + Prom 54018 - 54077 5.3 40 24 Op 1 5/0.238 + CDS 54105 - 55823 1768 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 41 24 Op 2 4/0.381 + CDS 55860 - 56861 1134 ## COG2008 Threonine aldolase 42 24 Op 3 4/0.381 + CDS 56872 - 58302 1186 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Prom 58314 - 58373 3.0 43 24 Op 4 . + CDS 58401 - 59414 951 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Term 59237 - 59278 1.0 44 25 Op 1 4/0.381 - CDS 59411 - 60241 772 ## COG3023 Negative regulator of beta-lactamase expression 45 25 Op 2 . - CDS 60238 - 60561 486 ## COG0393 Uncharacterized conserved protein - Prom 60637 - 60696 6.2 + Prom 60587 - 60646 4.1 46 26 Tu 1 . + CDS 60687 - 61202 335 ## ECO103_0909 putative lipoprotein + Term 61233 - 61273 5.6 + Prom 61263 - 61322 2.0 47 27 Op 1 7/0.095 + CDS 61348 - 62148 246 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 48 27 Op 2 12/0.000 + CDS 62166 - 62897 1101 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 49 27 Op 3 12/0.000 + CDS 62904 - 63620 797 ## COG4215 ABC-type arginine transport system, permease component 50 27 Op 4 4/0.381 + CDS 63620 - 64288 895 ## COG4160 ABC-type arginine/histidine transport system, permease component + Term 64428 - 64472 0.7 + Prom 64454 - 64513 9.4 51 28 Tu 1 . + CDS 64580 - 65311 860 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 65465 - 65496 2.5 52 29 Op 1 . - CDS 65486 - 66613 1047 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 53 29 Op 2 . - CDS 66654 - 67142 384 ## LF82_2664 inner membrane protein YbjO 54 29 Op 3 36/0.000 - CDS 67202 - 68047 715 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 55 29 Op 4 30/0.000 - CDS 68044 - 68997 932 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 56 29 Op 5 13/0.000 - CDS 69007 - 70140 1273 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 57 29 Op 6 . - CDS 70235 - 71347 1144 ## COG0687 Spermidine/putrescine-binding periplasmic protein - Prom 71515 - 71574 7.3 - Term 71635 - 71690 7.2 58 30 Op 1 . - CDS 71698 - 72174 386 ## EcE24377A_0925 TPR repeat-containing protein - Prom 72201 - 72260 1.6 59 30 Op 2 4/0.381 - CDS 72262 - 73164 1507 ## PROTEIN SUPPORTED gi|15830186|ref|NP_308959.1| ribosomal protein S6 modification protein 60 30 Op 3 . - CDS 73225 - 73947 680 ## COG0778 Nitroreductase 61 30 Op 4 . - CDS 73931 - 74218 220 ## SSON_0835 hypothetical protein - Prom 74325 - 74384 4.8 + Prom 74295 - 74354 2.2 62 31 Tu 1 . + CDS 74378 - 74635 500 ## COG0695 Glutaredoxin and related proteins + Term 74647 - 74675 1.4 63 32 Tu 1 . - CDS 74665 - 75042 117 ## ECIAI39_0827 conserved hypothetical protein; putative inner membrane protein + Prom 75135 - 75194 5.5 64 33 Tu 1 . + CDS 75312 - 76997 1572 ## COG2985 Predicted permease + Term 77107 - 77161 0.4 65 34 Op 1 . - CDS 77233 - 77451 170 ## B21_00857 hypothetical protein - Prom 77481 - 77540 4.0 66 34 Op 2 2/0.667 - CDS 77542 - 78540 762 ## COG3500 Phage protein D 67 34 Op 3 2/0.667 - CDS 78639 - 79124 517 ## COG3499 Phage protein U 68 34 Op 4 . - CDS 79121 - 82198 2415 ## COG5283 Phage-related tail protein - Term 82278 - 82312 3.2 69 35 Op 1 . - CDS 82325 - 82627 373 ## ECIAI39_1794 putative phage tail protein E 70 35 Op 2 6/0.095 - CDS 82682 - 83197 520 ## COG3498 Phage tail tube protein FII 71 35 Op 3 . - CDS 83207 - 84379 997 ## COG3497 Phage tail sheath protein FI 72 36 Op 1 . - CDS 84486 - 84899 279 ## EcHS_A0941 putative tail fiber assembly protein 73 36 Op 2 3/0.571 - CDS 84899 - 86818 861 ## COG5301 Phage-related tail fibre protein 74 36 Op 3 4/0.381 - CDS 86815 - 87420 498 ## COG4385 Bacteriophage P2-related tail formation protein 75 36 Op 4 4/0.381 - CDS 87413 - 88321 902 ## COG3948 Phage-related baseplate assembly protein 76 36 Op 5 4/0.381 - CDS 88308 - 88667 332 ## COG3628 Phage baseplate assembly protein W 77 36 Op 6 . - CDS 88664 - 89218 465 ## COG4540 Phage P2 baseplate assembly protein gpV - Term 89401 - 89434 -0.5 78 37 Tu 1 . - CDS 89613 - 89768 58 ## - Prom 89791 - 89850 3.2 + Prom 90456 - 90515 6.9 79 38 Tu 1 . + CDS 90553 - 91296 196 ## COG1479 Uncharacterized conserved protein + Term 91342 - 91382 1.4 - Term 91328 - 91370 3.0 80 39 Tu 1 . - CDS 91372 - 91689 133 ## LF82_p394 phage tail protein 81 40 Op 1 . - CDS 91811 - 92242 407 ## SeD_A3040 phage tail completion protein R 82 40 Op 2 . - CDS 92338 - 92766 291 ## B21_00843 hypothetical protein 83 40 Op 3 . - CDS 92763 - 93278 299 ## COG3772 Phage-related lysozyme (muraminidase) 84 40 Op 4 . - CDS 93259 - 93474 255 ## ECS88_2829 putative secretory protein 85 40 Op 5 . - CDS 93478 - 93681 157 ## COG5004 P2-like prophage tail protein X 86 40 Op 6 . - CDS 93681 - 94145 430 ## ECED1_3085 head completion/stabilization protein (GpL) 87 40 Op 7 . - CDS 94241 - 94891 622 ## ECED1_3086 terminase, endonuclease subunit (GpM) 88 40 Op 8 . - CDS 94895 - 95953 1265 ## SeD_A3048 phage major capsid protein, P2 family 89 40 Op 9 . - CDS 95970 - 96803 956 ## EcHS_A0925 phage capsid scaffolding protein + Prom 96771 - 96830 1.7 90 41 Op 1 . + CDS 96946 - 98712 1495 ## COG5484 Uncharacterized conserved protein 91 41 Op 2 . + CDS 98712 - 99779 673 ## COG5518 Bacteriophage capsid portal protein + Term 99787 - 99812 -0.5 + Prom 99783 - 99842 1.7 92 41 Op 3 . + CDS 99864 - 100370 229 ## Msip34_1475 hypothetical protein + Prom 101068 - 101127 3.1 93 42 Tu 1 . + CDS 101283 - 101708 239 ## + Term 101827 - 101874 2.2 - Term 101638 - 101684 -0.9 94 43 Op 1 . - CDS 101868 - 102101 311 ## ECS88_2838 putative DinI-like damage-inducible protein 95 43 Op 2 . - CDS 102112 - 102300 109 ## ECS88_2839 hypothetical protein - Prom 102356 - 102415 1.7 - Term 102419 - 102449 -0.5 96 44 Op 1 . - CDS 102453 - 104867 1538 ## t3410 endonuclease 97 44 Op 2 1/0.857 - CDS 104864 - 105721 429 ## COG0338 Site-specific DNA methylase 98 44 Op 3 . - CDS 105718 - 105945 269 ## COG1734 DnaK suppressor protein 99 44 Op 4 . - CDS 105945 - 106178 309 ## t3407 hypothetical protein 100 44 Op 5 . - CDS 106246 - 106587 169 ## E2348C_0805 hypothetical protein 101 44 Op 6 . - CDS 106551 - 106751 118 ## ECB_00820 hypothetical protein 102 44 Op 7 . - CDS 106759 - 107268 485 ## c0936 hypothetical protein 103 44 Op 8 . - CDS 107301 - 107522 261 ## B21_00834 hypothetical protein - Prom 107588 - 107647 4.7 104 45 Tu 1 . + CDS 107888 - 108217 112 ## SBO_0748 repressor protein + Prom 108531 - 108590 3.7 105 46 Tu 1 . + CDS 108611 - 109642 369 ## COG0582 Integrase + Prom 109854 - 109913 4.7 106 47 Tu 1 . + CDS 110067 - 110375 120 ## + Term 110436 - 110465 -0.2 - Term 110334 - 110392 2.0 107 48 Tu 1 . - CDS 110479 - 111015 470 ## COG3226 Uncharacterized protein conserved in bacteria - Prom 111077 - 111136 2.0 + Prom 111015 - 111074 2.4 108 49 Op 1 2/0.667 + CDS 111099 - 112307 1103 ## COG0477 Permeases of the major facilitator superfamily 109 49 Op 2 . + CDS 112307 - 113122 846 ## COG0561 Predicted hydrolases of the HAD superfamily 110 49 Op 3 . + CDS 113214 - 113492 226 ## ECO103_0887 hypothetical protein + Term 113498 - 113542 6.1 - Term 113489 - 113527 6.9 111 50 Tu 1 . - CDS 113533 - 114765 1245 ## COG0477 Permeases of the major facilitator superfamily - Prom 114868 - 114927 8.4 112 51 Op 1 4/0.381 + CDS 115050 - 115646 515 ## COG0671 Membrane-associated phospholipid phosphatase 113 51 Op 2 . + CDS 115704 - 116462 655 ## COG1349 Transcriptional regulators of sugar metabolism - Term 116461 - 116497 6.3 114 52 Tu 1 . - CDS 116509 - 117732 1256 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 117752 - 117811 5.1 + Prom 117711 - 117770 3.8 115 53 Tu 1 . + CDS 117958 - 118584 604 ## COG0625 Glutathione S-transferase 116 54 Op 1 . - CDS 118581 - 119147 504 ## COG2133 Glucose/sorbosone dehydrogenases 117 54 Op 2 . - CDS 119138 - 119551 209 ## COG2133 Glucose/sorbosone dehydrogenases - Prom 119716 - 119775 4.4 - Term 119762 - 119801 5.0 118 55 Tu 1 . - CDS 119806 - 120189 248 ## EcE24377A_0907 biofilm formation regulatory protein BssR - Prom 120254 - 120313 4.5 + Prom 120308 - 120367 4.9 119 56 Tu 1 . + CDS 120402 - 121727 1844 ## PROTEIN SUPPORTED gi|183179613|ref|ZP_02957824.1| conserved hypothetical protein - Term 121720 - 121763 7.7 120 57 Op 1 6/0.095 - CDS 121774 - 123102 989 ## COG2199 FOG: GGDEF domain 121 57 Op 2 3/0.571 - CDS 123110 - 125458 1443 ## COG2200 FOG: EAL domain - Prom 125538 - 125597 5.6 - Term 125527 - 125561 -1.0 122 58 Op 1 49/0.000 - CDS 125636 - 126505 795 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 123 58 Op 2 38/0.000 - CDS 126550 - 127470 943 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 124 58 Op 3 11/0.000 - CDS 127488 - 129026 1660 ## COG0747 ABC-type dipeptide transport system, periplasmic component 125 58 Op 4 3/0.571 - CDS 129046 - 130917 844 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 126 58 Op 5 . - CDS 130904 - 131869 989 ## COG1446 Asparaginase - Prom 131937 - 131996 7.5 + Prom 131859 - 131918 2.9 127 59 Op 1 9/0.000 + CDS 132073 - 133308 1181 ## COG0303 Molybdopterin biosynthesis enzyme 128 59 Op 2 . + CDS 133308 - 134057 829 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 + Term 134071 - 134115 3.7 - Term 134078 - 134129 5.3 129 60 Tu 1 . - CDS 134236 - 134904 814 ## COG0176 Transaldolase - Prom 134989 - 135048 3.0 + Prom 134885 - 134944 3.6 130 61 Op 1 11/0.000 + CDS 135029 - 135928 1000 ## COG1180 Pyruvate-formate lyase-activating enzyme 131 61 Op 2 2/0.667 + CDS 135934 - 138366 2773 ## COG1882 Pyruvate-formate lyase + Prom 138395 - 138454 3.8 132 62 Tu 1 . + CDS 138512 - 139327 878 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 139336 - 139366 2.6 + Prom 139376 - 139435 3.9 133 63 Tu 1 . + CDS 139479 - 140399 819 ## B21_00805 hypothetical protein + Term 140400 - 140433 -0.2 134 64 Tu 1 . - CDS 140403 - 140609 125 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|299857053|gb|ADWS01000011.1| GENE 1 1 - 852 504 283 aa, chain + ## HITS:1 COG:ECs0987 KEGG:ns NR:ns ## COG: ECs0987 COG2116 # Protein_GI_number: 15830241 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli O157:H7 # 1 283 3 285 285 531 100.0 1e-151 ADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTGTM PFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYFGNL VGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS YSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFWTAVGSAPENF SHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRENDHH >gi|299857053|gb|ADWS01000011.1| GENE 2 907 - 3189 2587 760 aa, chain + ## HITS:1 COG:pflB KEGG:ns NR:ns ## COG: pflB COG1882 # Protein_GI_number: 16128870 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 1 760 1 760 760 1565 100.0 0 MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATEATTTLWDKVME GVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQTEAPLKRALIPFGGIKMIE GSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAYGRGRIIG DYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTIRLREEIAEQHRALGQMKEMAAK YGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQ EAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFLNT LYTMGPSPEPNMTILWSEKLPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACC VSPMIVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNYDEVMERM DHFMDWLAKQYITALNIIHYMHDKYSYEASLMALHDRDVIRTMACGIAGLSVAADSLSAI KYAKVKPIRDEDGLAIDFEIEGEYPQFGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIP TQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYA KDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAM ENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM >gi|299857053|gb|ADWS01000011.1| GENE 3 3381 - 4121 668 246 aa, chain + ## HITS:1 COG:ECs0985 KEGG:ns NR:ns ## COG: ECs0985 COG1180 # Protein_GI_number: 15830239 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 519 100.0 1e-147 MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEV VTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDEL LEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDS AHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQY GHKVMF >gi|299857053|gb|ADWS01000011.1| GENE 4 4203 - 4793 390 196 aa, chain - ## HITS:1 COG:ycaK KEGG:ns NR:ns ## COG: ycaK COG2249 # Protein_GI_number: 16128868 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 1 196 1 196 196 399 99.0 1e-111 MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTSEDEPDWK NMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPF NKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHAS YYQSLLSQVRDMVDAL >gi|299857053|gb|ADWS01000011.1| GENE 5 4893 - 5801 448 302 aa, chain + ## HITS:1 COG:ycaN KEGG:ns NR:ns ## COG: ycaN COG0583 # Protein_GI_number: 16128867 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 302 1 302 302 623 99.0 1e-178 MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQRLKIRLFNRTTRSVSLT EAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARVAARIFLMPLLVGFTREYP DIKVELTTDDSLVDIVQQGFDAGVRLSGIVEKDMISVAIGPPVKLCVAATPEYFARYGKP RHPHDLLNYQCVVFRYPSGKPFHWQFAKELEIAVAGNIILDDVDAELEAVLMGAGIGYLL YEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQYMSCGLRAFLDYVKTGQICQSQRHR PQ >gi|299857053|gb|ADWS01000011.1| GENE 6 5802 - 7232 1464 476 aa, chain - ## HITS:1 COG:ycaM KEGG:ns NR:ns ## COG: ycaM COG0531 # Protein_GI_number: 16128866 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 476 65 540 540 887 100.0 0 MAGNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFTPYALIVG QLGSTFKDGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWAMKGDG SLIKEYSVVALQGLTLVLFIFFMWVASRGMKSLKIVGSVAGIAMFVMSLLYVAMAVTAPA ITEVHIATTNITWETFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGML CLAVMVAVCAILGSLAMGMMFDSRNIPDDLMTNGQYYAFQKLGEYYNMGNTLMVIYAIAN TLGQVAALVFSIDAPLKVLLGDADSKYIPASLCRTNASGTPVNGYFLTLVLVAILIMLPT LGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVVRLAQKYKPEYVFIRNKPLAMTVGI WCFAFTAFACLTGIFPKMEAFTAEWTFQLALNVATPFVLVGLGLIFPLLARKANSK >gi|299857053|gb|ADWS01000011.1| GENE 7 7442 - 8590 851 382 aa, chain - ## HITS:1 COG:ECs0983 KEGG:ns NR:ns ## COG: ECs0983 COG0477 # Protein_GI_number: 15830237 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 640 100.0 0 MSTYTRPVMLLLSGLLLLTLAIAVLNTLVPLWLAQEHMSTWQVGVVSSSYFTGNLVGTLL TGYVIKRIGFNRSYYLASFIFAAGCAGLGLMIGFWSWLAWRFVAGVGCAMIWVVVESALM CSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSVLPWVTGLTLAGILPLLFTRV LNQQAENHDSTSITSMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHKGVSNASIGFW MAVLVSAGILGQWPIGRLADKFGRLLVLRVQVFVVILGSIAMLSQAAMAPALFILGAAGF TLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGSLLGPSFTAMLMQNFSDNLLFIMIASV SFIYLLMLLRNAGHTPKPVAHV >gi|299857053|gb|ADWS01000011.1| GENE 8 8905 - 9531 606 208 aa, chain + ## HITS:1 COG:ECs0982 KEGG:ns NR:ns ## COG: ECs0982 COG1335 # Protein_GI_number: 15830236 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 430 100.0 1e-121 MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSF ETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVA FPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDI EGLATLFSNHIPDYRNLMTSYDTLTKQK >gi|299857053|gb|ADWS01000011.1| GENE 9 9567 - 10430 822 287 aa, chain - ## HITS:1 COG:ECs0981 KEGG:ns NR:ns ## COG: ECs0981 COG3302 # Protein_GI_number: 15830235 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 434 99.0 1e-122 MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRVIACMFGLWVLMGIGFI ASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGWLLAMLKKLSPALRTLWLV VTMVLGVVFVWMMVRVYNSIDTVPTWYSILTPMGFFLTMFMGGPLLGYLLLSLAGVDGWA MRLLPAISVLALVVSGVMSVMQGTELATIHSSVQQAAALVPDYGALMSWRIVLLAVALCL WIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYGLHMTVGMAVAS >gi|299857053|gb|ADWS01000011.1| GENE 10 10432 - 11049 547 205 aa, chain - ## HITS:1 COG:dmsB KEGG:ns NR:ns ## COG: dmsB COG0437 # Protein_GI_number: 16128862 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 205 1 205 205 414 100.0 1e-116 MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAGGDWQEDNGVWHQNVFA YYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNETK GHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRKKHGDLAAVAPLPRAHFTKPN IVIKPNANSRPTGDTTGYLANPKEV >gi|299857053|gb|ADWS01000011.1| GENE 11 11060 - 13504 2384 814 aa, chain - ## HITS:1 COG:dmsA KEGG:ns NR:ns ## COG: dmsA COG0243 # Protein_GI_number: 16128861 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 30 814 1 785 785 1630 99.0 0 MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSALTLPFSRIAHAVDSAIPTKSDEKVIW SACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYDGLHQVRACLRGRSMRRRVYNPDRL KYPMKRVGARGEGKFERISWEEAYDIIATNMQRLIKEYGNESIYLNYGTGTLGGTMTRSW PPGNTLVARLMNCCGGYLNHYGDYSSAQIAEGLNYTYGGWADGNSPSDIENSKLVVLFGN NPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALVNGL AYVMITENLVDQAFLDKYCVGYDEKTLPASAPKNGHYKAYILGEGPDGVAKTPEWASQIT GVPADKIIKLAREIGSTKPAFISQGWGPQRHANGEIATRAISMLAILTGNVGINGGNSGA REGSYSLPFVRMPTLENPIQTSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWN YAGNCLINQHSEINRTHEILQDDKKCELIVVIDCHMTSSAKYADILLPDCTASEQMDFAL DASCGNMSYVIFNDQVIKPRFECKTIYEMTSELAKRLGVEQQFTEGRTQEEWMRHLYAQS REAIPELPTFEEFRKQGIFKKRDPQGHHVAYKAFREDPQANPLTTPSGKIEIYSQALADI AATWELPEGDVIDPLPIYTPGFESYQDPLNKQYPLQLTGFHYKSRVHSTYGNVDVLKAAC RQEMWINPLDAQKRGINNGDKVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDTKR VDKGGCINVLTTQRPSPLAKGNPSHTNLVQVEKV >gi|299857053|gb|ADWS01000011.1| GENE 12 13743 - 15035 1642 430 aa, chain - ## HITS:1 COG:ECs0978 KEGG:ns NR:ns ## COG: ECs0978 COG0172 # Protein_GI_number: 15830232 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 430 1 430 430 865 100.0 0 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ AKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDN VEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFM LDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEV PLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED SMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCS NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLR PYMNGLEYIG >gi|299857053|gb|ADWS01000011.1| GENE 13 15126 - 16469 1043 447 aa, chain - ## HITS:1 COG:ECs0977 KEGG:ns NR:ns ## COG: ECs0977 COG2256 # Protein_GI_number: 15830231 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 870 99.0 0 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVNDSGKRVLKPELLTEI AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN RGLEGKIGEKLAWLAEQDQNSPIKRYR >gi|299857053|gb|ADWS01000011.1| GENE 14 16480 - 17091 674 203 aa, chain - ## HITS:1 COG:ECs0976 KEGG:ns NR:ns ## COG: ECs0976 COG2834 # Protein_GI_number: 15830230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Escherichia coli O157:H7 # 1 203 2 204 204 378 100.0 1e-105 MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDL WVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSS DWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQN GAVDAAKFTFTPPQGVTVDDQRK >gi|299857053|gb|ADWS01000011.1| GENE 15 17246 - 21313 3930 1355 aa, chain - ## HITS:1 COG:ZftsK KEGG:ns NR:ns ## COG: ZftsK COG1674 # Protein_GI_number: 15800753 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Escherichia coli O157:H7 EDL933 # 1 1355 1 1342 1342 2084 97.0 0 MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPI HNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVL ALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTG WSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARIL RGALARRKRLAEKFINPMGRQTDAALFSGKRMDDEEEIIYTARGVAADPDDVLFSGNRAT QPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQMPPVASVDVPPSQPTVAW QPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPY YAPAAEQPVQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQ PQSVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPI KSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKE GIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQ QDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGAN PFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPRPQYQQ PQQQVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQ PQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLAD FRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYV GLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTG SGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALR WCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEP YIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPT RIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDW KARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIG YNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD >gi|299857053|gb|ADWS01000011.1| GENE 16 21448 - 21942 519 164 aa, chain - ## HITS:1 COG:ECs0974 KEGG:ns NR:ns ## COG: ECs0974 COG1522 # Protein_GI_number: 15830228 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 312 100.0 2e-85 MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQG YTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTR VPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR >gi|299857053|gb|ADWS01000011.1| GENE 17 22486 - 23451 733 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 10 317 5 306 306 286 49 3e-76 MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDL TGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYL GLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG FRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL FVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA GTGCMAALDAERYLDGLADAK >gi|299857053|gb|ADWS01000011.1| GENE 18 23574 - 25340 170 588 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 369 570 150 351 398 70 29 5e-11 MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPRE ALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAG SWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFM ALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTM EVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEF FQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEDLFITSP EGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPES WRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVG DQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMV THQLEDLADWDVIWVMQDGRIIEQGRYAELSVAGGPFATLLAHRQEEI >gi|299857053|gb|ADWS01000011.1| GENE 19 25341 - 27062 1496 573 aa, chain + ## HITS:1 COG:cydC KEGG:ns NR:ns ## COG: cydC COG4987 # Protein_GI_number: 16128853 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components # Organism: Escherichia coli K12 # 1 573 1 573 573 1042 98.0 0 MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYM LPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELL NRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPL FYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQ SELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGA FQHLGQVIASAVRITDLTDQKPEVTFPDTQTHVANRVSLTLRDVQFTYPEQSQQALKGIS LQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVP QRVHLFSATLRDNLLLASPGSSDEALAESLRRVGLEKLLEDAGLNSWLGEGGRQLSGGEL RRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMREKTVLMVTHRLRGLSRFQ QIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL >gi|299857053|gb|ADWS01000011.1| GENE 20 27104 - 27808 341 234 aa, chain + ## HITS:1 COG:aat KEGG:ns NR:ns ## COG: aat COG2360 # Protein_GI_number: 16128852 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Escherichia coli K12 # 1 234 1 234 234 493 100.0 1e-139 MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWS PDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAY HRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGH GGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE >gi|299857053|gb|ADWS01000011.1| GENE 21 28093 - 28311 257 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 70 1 70 72 103 65 4e-21 MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY DLSKGRIVFRSR >gi|299857053|gb|ADWS01000011.1| GENE 22 30073 - 30627 389 184 aa, chain - ## HITS:1 COG:no KEGG:LF82_p093 NR:ns ## KEGG: LF82_p093 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_LF82 # Pathway: not_defined # 1 184 1 184 184 354 96.0 8e-97 MDHYLEIRVLPDPEFSSEMLMAALFAKLHRALGARGQGDIGVSFPDVNVTPGARLRLHGS APALQELEASTWRKGLTDYCQCSPVTPVPEIKGWRVVSRVQVKSNPQRLLRRSVKKGWLT EEQAIERLATQAELRTDLPFLNMKSLSSQQQFKLFIRHGDLLTEPVKGEFSSYGLSATAT IPWF >gi|299857053|gb|ADWS01000011.1| GENE 23 30638 - 31639 1019 333 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0910 NR:ns ## KEGG: ECS88_0910 # Name: not_defined # Def: conserved hypothetical protein CRISPR-associated # Organism: E.coli_S88 # Pathway: not_defined # 1 333 1 333 333 637 96.0 0 MAKAPVAIKTASVLAFERKLATSDAVMYAGNWQGNVWQPIEIQEKAVRGTISNRLKNTIT SDSTKLDAEIQKANLQRVDVASLPVDADTLKVVFTLRVLGNLSTPSVCNDMAYQEALSGV IEGYISEHGFKELALRYALNLANGRFLWRNRIGAEQIQVKVTANDTFWTFNSHDFSLRQF DQGQAAVTQLAAIIEQGLSAKEWVMLTVEAQVRLGGGQEVFPSQELVLDSNSSKSRVLYQ VAGIAGIHSQKIGNALRTIDTWHPKVDELGAIAVEPYGSVTSRGVACRQPKEKLDFYTLL DNWVTKGVKPDVDQQHYVMAVLIRGGVFGEKSE >gi|299857053|gb|ADWS01000011.1| GENE 24 31650 - 32573 658 307 aa, chain - ## HITS:1 COG:no KEGG:ECED1_0853 NR:ns ## KEGG: ECED1_0853 # Name: not_defined # Def: conserved hypothetical protein CRISPR-associated # Organism: E.coli_ED1a # Pathway: not_defined # 1 307 1 307 307 636 96.0 0 MSYLLLLPHIRIENANAVSGLTWGFPSMTHFLGYVHALSRKVVDEFGVSFDGCAVVSHEQ HIQAYSSGRDFQFALTRNPLTREGKTASFNEEGRMHLTVSLLIECNGEITNGEYGRKALC DHLKMLCQSHKLAGGSIVDMREPQLFHAPEDEKQLRKIIWRLMPGYALYDRSEWLAERHQ QHPDISLLDAWLDFAAVKYQAESPAEDNSAKWTYQPKPMPGFLVPLMCGYQRISPVYAPG EVENARDTVTPFAFAEAVYGIGEWRGLHRITDLQPLMWHYRTTDTGYYCSATPVVDDFTF NEYDDLE >gi|299857053|gb|ADWS01000011.1| GENE 25 32570 - 33877 622 435 aa, chain - ## HITS:1 COG:no KEGG:ECED1_0852 NR:ns ## KEGG: ECED1_0852 # Name: not_defined # Def: conserved hypothetical protein CRISPR-associated # Organism: E.coli_ED1a # Pathway: not_defined # 1 435 1 435 435 700 84.0 0 MEKTALIQFITDYIASRRQPKIDAFEKEAAKRLEQGEDASVIALERQELEARYLPRNWLT DAANRIRSIRIISHGAKYSNGDSKAYGRYLEKFVSEGYLNTASLAIIKEDAEGNAAVFDV AKLLLTEINGDSLLASLKRGDYHSLNVFALNDEQLKQWVECFSKAYASEWIKAHKLSKQI YFPVDDGYHLLCPLFSSSLAQAMYEKLTAVRFSEESKVIRDAHKAGKWHSQPDIRFPNLA EMHYGGGNQQNISLLNSARIGRVWLLPSMPPTWATLDRAPQNMRSIFALRGDFNRAASGI IARMTYLLKVDINNVHIRTARAKYIDELIDLLFMQASAFQQEKWQGWSAQSQDLPRHQQL WLDPWRSLSDETFKQEREKNDWQETVADDFARWLNYRLKKSSFDVGAVEQKEWRSQSLFA QRMREMEAVLQEALK >gi|299857053|gb|ADWS01000011.1| GENE 26 34208 - 37234 1329 1008 aa, chain - ## HITS:1 COG:YPO2467 KEGG:ns NR:ns ## COG: YPO2467 COG1203 # Protein_GI_number: 16122688 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Yersinia pestis # 2 1005 71 1091 1095 966 51.0 0 MELMWIVGNIRHFNAQGRVPTNRTTQTSLVNKEENRWQCAESIALLAAIAGLFHDFGKSG RSFQQSLTQKNARSYQPYRHEWISLRLFQAFVGDRPDDVWLAKLGELTADDESAILERLL KDTPQFSDSPFTSLQPLAKTVGWLILSHHRIPENLSPQPEQSCKGCESWLERQLNADWNA VNHRRDDWSQQDFAHVWQFPSGTPLQSASWREKARQIARRASNALGLKTYGQMEQLFPLH MARFCLMLADHYYSSRDAQQKWQDPEYIVWANSDRQSGTLKQRVDEHLVGVAHHAYLLGR QLMHTRASLPAIARHKGFSQRATDVKYRWQNKAWDVARALRERSREEGFFGVNIASTGCG KTFANARIMYALADEREGCRFTVALGLRTLTLQTGDALRSRLGLGEDELAVLIGSAAVKQ LWQQEKIDNDCGSASQESPAEEQQFVKYEGSLHNGALEKWLKDDSKLKALVSAPILVATI DHLISATEGVRGGKQLPAMLRLLTCDLVLDEPDDFDIADLHAVCRLMNWAGMLGTRVLLS SATLPPGLIQALFAAYLAGRKMWQASCGTNGRPVNICCAWFDENDADATQISDGAAFRDA HTKFVARRAVMLAEKERLHFGRVASISSASVAIQDVTESVAQTVHTQMLKLHQAHRQLHE SGKTVSLGLVRFSNINPLVAVTKALIAIPSPENVCIHYCVYHSRHPLAVRSDIEKRLDRA FTRHNELDFWNNEDIADALHNRPESHHLFVVLGTSVIEVGRDWDADWGIIEPSSMRSIIQ FAGRIQRHRRNVPTSENLVILRSNIKSLQKKAPAFCKPGFETKEHLLNSHDICELIPIAD YRTINALPRILSANNDNKLAELEHSRLSAELMSSKSKHVVAAQWWRAPLSWNGWIQRQTP FRYSPLPEAVFFLHMDDEESEVRFYSRTGDNERKAQGNFRREEVRCASGVACWGVMDYQH VLLNLADKQGCEIQRVGEMFAEVRVPASEEDAVDDWRYHPWLGVFRNQ >gi|299857053|gb|ADWS01000011.1| GENE 27 37438 - 38421 807 327 aa, chain - ## HITS:1 COG:YPO2468 KEGG:ns NR:ns ## COG: YPO2468 COG1518 # Protein_GI_number: 16122689 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Yersinia pestis # 4 319 5 320 328 460 69.0 1e-129 MSSNYLTPSDLKTILHSKRANIYYLEKCRVQVNGGRVEYVTSEGKESYYWNIPIANTTAL MLGMGTSVTQAAMREFAHAGVMVGFCGTDGTPLYSANEVDVDVSWLSPQSEYRPTEYLQQ WVSFWFVEVKRLAAAKRFQLIRLAHIEKHWTSAKMQREHAFQPDVNALHTLLNRTREEID AAENHTQLMLVEAKLTKALYKMVSQTVGYGDFTRAKRGGGIDMANRFLDQGNYLAYGLAA VAAWVTGIPHGLAVMHGKTRRGGLVFDLADLIKDALVMPQAFIAAMAGEDAQEFRQRCIN IFQQADALDVMITSLQETAQALAKADQ >gi|299857053|gb|ADWS01000011.1| GENE 28 39614 - 41890 1361 758 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 10 741 14 806 815 528 38 1e-149 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH >gi|299857053|gb|ADWS01000011.1| GENE 29 41921 - 42241 312 106 aa, chain - ## HITS:1 COG:ECs0967 KEGG:ns NR:ns ## COG: ECs0967 COG2127 # Protein_GI_number: 15830221 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 106 1 106 106 209 100.0 8e-55 MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA >gi|299857053|gb|ADWS01000011.1| GENE 30 42411 - 42653 96 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSENIFAAAFRADETKPFGIVEPLNSTLFHASTSFANLIQVRWNKPGSERGLFKTSPTLE IQFRELGRAVKRLTGARGQV >gi|299857053|gb|ADWS01000011.1| GENE 31 42564 - 42788 226 74 aa, chain + ## HITS:1 COG:ECs0966 KEGG:ns NR:ns ## COG: ECs0966 COG1278 # Protein_GI_number: 15830220 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 74 1 74 74 145 100.0 2e-35 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH ASVIVPVEVEAAVA >gi|299857053|gb|ADWS01000011.1| GENE 32 42861 - 44807 368 648 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 256 648 7 413 413 146 27 6e-34 MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKA TSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQ RLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSG EEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNVAGGTEPV VNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMV LADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRY NNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVV GEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGF DSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGV MNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQL FLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE >gi|299857053|gb|ADWS01000011.1| GENE 33 44804 - 45919 1169 371 aa, chain - ## HITS:1 COG:ECs0964 KEGG:ns NR:ns ## COG: ECs0964 COG0845 # Protein_GI_number: 15830218 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 371 10 380 380 643 99.0 0 MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALR KVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEA ELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTN LDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPG QKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQL TDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEV VIGEAKPGAAQ >gi|299857053|gb|ADWS01000011.1| GENE 34 46076 - 47026 630 316 aa, chain + ## HITS:1 COG:ybjX KEGG:ns NR:ns ## COG: ybjX COG2990 # Protein_GI_number: 16128845 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 316 15 330 330 604 99.0 1e-173 MSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMN ELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYL NTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKR TMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHI YRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRY EMLDAIQPQMATMFRG >gi|299857053|gb|ADWS01000011.1| GENE 35 47023 - 48681 1053 552 aa, chain - ## HITS:1 COG:ECs0962 KEGG:ns NR:ns ## COG: ECs0962 COG3593 # Protein_GI_number: 15830216 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Escherichia coli O157:H7 # 1 552 1 552 552 1072 99.0 0 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ GFSDVFHRVAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF SRVLWLARGRAD >gi|299857053|gb|ADWS01000011.1| GENE 36 49107 - 49802 747 231 aa, chain + ## HITS:1 COG:aqpZ KEGG:ns NR:ns ## COG: aqpZ COG0580 # Protein_GI_number: 16128843 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli K12 # 1 231 1 231 231 353 99.0 1e-97 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNG YGEHSPGGYSMLSALVVELVLSAGFLLVIHGTTDKFAPAGFAPIAIGLALTLIHLISIPV TNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD >gi|299857053|gb|ADWS01000011.1| GENE 37 50297 - 51196 775 299 aa, chain + ## HITS:1 COG:ybjE KEGG:ns NR:ns ## COG: ybjE COG2431 # Protein_GI_number: 16128842 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 299 17 315 315 479 100.0 1e-135 MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLA ILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFA IGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVVSSLI GGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLI PGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA >gi|299857053|gb|ADWS01000011.1| GENE 38 51340 - 52992 1950 550 aa, chain + ## HITS:1 COG:ECs0959 KEGG:ns NR:ns ## COG: ECs0959 COG1151 # Protein_GI_number: 15830213 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Escherichia coli O157:H7 # 1 550 3 552 552 1160 100.0 0 MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINH DVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQL VSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIY AQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATA GKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQ QVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGEDFSAVIAQAQQMA GFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFAT SVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTV EEDMKQLLSA >gi|299857053|gb|ADWS01000011.1| GENE 39 53004 - 53972 896 322 aa, chain + ## HITS:1 COG:ybjV KEGG:ns NR:ns ## COG: ybjV COG1018 # Protein_GI_number: 16128840 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 322 1 322 322 663 99.0 0 MTMPTNQCPWRMQIHHITQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTIS STPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAG CGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEWRNYPVTLVAENNVTEGFIAG RLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLK FTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTD AEIAEGYVLACSCHPQGDLVLA >gi|299857053|gb|ADWS01000011.1| GENE 40 54105 - 55823 1768 572 aa, chain + ## HITS:1 COG:ECs0957 KEGG:ns NR:ns ## COG: ECs0957 COG0028 # Protein_GI_number: 15830211 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 572 1 572 572 1149 99.0 0 MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEWMSTRHEEVAAFAAGAE AQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQEL FRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLPGDVALKPAPEGATTHWYHAP QPIVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKELVEFAGKIKAPIVHALRGKEHV EYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPYRAFYPTDAKIIQIDINPASIGA HSKVDMALVGDIKSTLRALLPLVEEKTDRKFLDKALEDYRDARKGLDDLAKPSEKAIHPQ YLAQQISHFAADDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQA TEPERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYLTDGT ELHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKEELAIPPQIKL EQAKGFSLYMLRAIISGRGDEVIELAKTNWLR >gi|299857053|gb|ADWS01000011.1| GENE 41 55860 - 56861 1134 333 aa, chain + ## HITS:1 COG:ybjU KEGG:ns NR:ns ## COG: ybjU COG2008 # Protein_GI_number: 16128838 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Escherichia coli K12 # 1 333 1 333 333 660 99.0 0 MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQ ANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKI KPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERNLALHVDGARIFNAVVAYGCE LKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMAGGGMRQSGILAAAGMY ALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTNMLFVRVGEENAAALGEYMKARNVL INASPIVRLVTHLDVSREQLAEVAAHWRAFLAR >gi|299857053|gb|ADWS01000011.1| GENE 42 56872 - 58302 1186 476 aa, chain + ## HITS:1 COG:ybjT KEGG:ns NR:ns ## COG: ybjT COG0702 # Protein_GI_number: 16128837 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 476 11 486 486 958 99.0 0 MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNL PALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQS DHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT PIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTR WISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEK LVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNIL WQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLC FSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD >gi|299857053|gb|ADWS01000011.1| GENE 43 58401 - 59414 951 337 aa, chain + ## HITS:1 COG:ybjS KEGG:ns NR:ns ## COG: ybjS COG0451 # Protein_GI_number: 16128836 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 337 13 349 349 707 100.0 0 MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMGAEFVPADLTELVSSQA KVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFD YHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQTRFTILRPQSLFGPHDKVFI PRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPSGRVYNITNGEHR TLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMERLGRKSAKEPPLTHYGVSKLNFDFT LDITRAQEELGYQPVITLDEGIEKTAAWLRDHGKLPR >gi|299857053|gb|ADWS01000011.1| GENE 44 59411 - 60241 772 276 aa, chain - ## HITS:1 COG:ECs0953 KEGG:ns NR:ns ## COG: ECs0953 COG3023 # Protein_GI_number: 15830207 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Escherichia coli O157:H7 # 1 276 1 276 276 541 99.0 1e-154 MRRVFWLIAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD >gi|299857053|gb|ADWS01000011.1| GENE 45 60238 - 60561 486 107 aa, chain - ## HITS:1 COG:ECs0952 KEGG:ns NR:ns ## COG: ECs0952 COG0393 # Protein_GI_number: 15830206 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 187 100.0 4e-48 MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREI AFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR >gi|299857053|gb|ADWS01000011.1| GENE 46 60687 - 61202 335 171 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0909 NR:ns ## KEGG: ECO103_0909 # Name: ybjP # Def: putative lipoprotein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 171 1 171 171 338 100.0 6e-92 MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPESARVASASTIPNRDARNIP LRVDLKQGDQSWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR >gi|299857053|gb|ADWS01000011.1| GENE 47 61348 - 62148 246 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 23 244 1 215 305 99 29 8e-20 MHNYSVKGTIFDLNSYQTASIRVSMSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGP SGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPH LTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARAL MMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMEN GHIVEQGDASCFTEPQTEAFKNYLSH >gi|299857053|gb|ADWS01000011.1| GENE 48 62166 - 62897 1101 243 aa, chain + ## HITS:1 COG:artI KEGG:ns NR:ns ## COG: artI COG0834 # Protein_GI_number: 16128831 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 243 1 243 243 475 100.0 1e-134 MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIVGFDVDLAQALCKEIDA TCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTTPYYDNSALFVGQQGKYTS VDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVVTE WLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQKLNTALEKVKKDGTYETIYNKW FQK >gi|299857053|gb|ADWS01000011.1| GENE 49 62904 - 63620 797 238 aa, chain + ## HITS:1 COG:artQ KEGG:ns NR:ns ## COG: artQ COG4215 # Protein_GI_number: 16128830 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Escherichia coli K12 # 1 238 1 238 238 426 100.0 1e-119 MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEI LVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVSPFLCGVIALSLLYAAYAS QTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS LISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERRPS >gi|299857053|gb|ADWS01000011.1| GENE 50 63620 - 64288 895 222 aa, chain + ## HITS:1 COG:ECs0944 KEGG:ns NR:ns ## COG: ECs0944 COG4160 # Protein_GI_number: 15830198 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 372 100.0 1e-103 MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPL LVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIPEG QWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLL YGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAFERRN >gi|299857053|gb|ADWS01000011.1| GENE 51 64580 - 65311 860 243 aa, chain + ## HITS:1 COG:artJ KEGG:ns NR:ns ## COG: artJ COG0834 # Protein_GI_number: 16128828 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 243 1 243 243 481 99.0 1e-136 MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQA ECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKT FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTAVVNE WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW FPQ >gi|299857053|gb|ADWS01000011.1| GENE 52 65486 - 66613 1047 375 aa, chain - ## HITS:1 COG:ybjF KEGG:ns NR:ns ## COG: ybjF COG2265 # Protein_GI_number: 16128827 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 375 1 375 375 755 98.0 0 MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAK MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG ELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQEQLPQLKVITVNIQPVHMAIM EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL FCGVGGFGLHCATPDMQLTGIEIASEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEV PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDVRELPGYRIERVQLFDMF PHTAHYEVLTLLVKQ >gi|299857053|gb|ADWS01000011.1| GENE 53 66654 - 67142 384 162 aa, chain - ## HITS:1 COG:no KEGG:LF82_2664 NR:ns ## KEGG: LF82_2664 # Name: ybjO # Def: inner membrane protein YbjO # Organism: E.coli_LF82 # Pathway: not_defined # 1 162 1 162 162 290 100.0 1e-77 MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSV QTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQITAASYLWAASLGYGYPEL FSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQLQ >gi|299857053|gb|ADWS01000011.1| GENE 54 67202 - 68047 715 281 aa, chain - ## HITS:1 COG:STM0880 KEGG:ns NR:ns ## COG: STM0880 COG1177 # Protein_GI_number: 16764242 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Salmonella typhimurium LT2 # 1 281 1 281 281 451 94.0 1e-127 MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELLRDDA MMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLS LLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGAT PLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNP EINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQRARHG >gi|299857053|gb|ADWS01000011.1| GENE 55 68044 - 68997 932 317 aa, chain - ## HITS:1 COG:potH KEGG:ns NR:ns ## COG: potH COG1176 # Protein_GI_number: 16128824 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli K12 # 1 317 1 317 317 552 99.0 1e-157 MNTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLAEMA RAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQSLQVAAISTFCCLLIGYPL AWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTI LHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGG IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIV PIMWFHKHQQKSVGEHG >gi|299857053|gb|ADWS01000011.1| GENE 56 69007 - 70140 1273 377 aa, chain - ## HITS:1 COG:potG KEGG:ns NR:ns ## COG: potG COG3842 # Protein_GI_number: 16128823 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli K12 # 1 377 28 404 404 760 99.0 0 MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKST LLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDK LPKAEIASRVHEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGAL DKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH PTTRYSAEFIGSVNVFEGVLKERQEDGLVLDSPGLVHPLKVDADASVVDNVPVHVALRPE KIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHVRLKSGQMISAQLQNAHRHRKGLPTWG DEVRLCWEVDSCVVLTV >gi|299857053|gb|ADWS01000011.1| GENE 57 70235 - 71347 1144 370 aa, chain - ## HITS:1 COG:potF KEGG:ns NR:ns ## COG: potF COG0687 # Protein_GI_number: 16128822 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 370 1 370 370 734 99.0 0 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYD VFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLV AKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFL DAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICV AIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLL RPDVVAHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTLKVQDPKIDRVRT RAWTKVKSGK >gi|299857053|gb|ADWS01000011.1| GENE 58 71698 - 72174 386 158 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_0925 NR:ns ## KEGG: EcE24377A_0925 # Name: not_defined # Def: TPR repeat-containing protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 158 17 174 174 310 100.0 1e-83 MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAM AEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFV RQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH >gi|299857053|gb|ADWS01000011.1| GENE 59 72262 - 73164 1507 300 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15830186|ref|NP_308959.1| ribosomal protein S6 modification protein [Escherichia coli O157:H7 str. Sakai] # 1 300 1 300 300 585 99 1e-166 MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSIHYKGRKLPHFDA VIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIA HSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAHILVQEYI KEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGGAASVASITPQEREIAIKAARTM ALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGIDIAGKMIRWIERHATTEYCLKTGG >gi|299857053|gb|ADWS01000011.1| GENE 60 73225 - 73947 680 240 aa, chain - ## HITS:1 COG:ECs0931 KEGG:ns NR:ns ## COG: ECs0931 COG0778 # Protein_GI_number: 15830185 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 469 98.0 1e-132 MTPTIELICGHRSIRHFTDEPISDAQCEAIINSARATSSSSFLQCSSIIRITDKALREEL VTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLLLGVVDTAMMAQNALTAAE SLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWPADNPDLKPRLPASILVHENS YQPLDKDALAQYDEQLAEYYLTRGSNNRRDTWSDHIRRTIIKESRPFILDYLHKQGWATR >gi|299857053|gb|ADWS01000011.1| GENE 61 73931 - 74218 220 95 aa, chain - ## HITS:1 COG:no KEGG:SSON_0835 NR:ns ## KEGG: SSON_0835 # Name: ybjC # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 95 1 95 95 137 100.0 2e-31 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH >gi|299857053|gb|ADWS01000011.1| GENE 62 74378 - 74635 500 85 aa, chain + ## HITS:1 COG:grxA KEGG:ns NR:ns ## COG: grxA COG0695 # Protein_GI_number: 16128817 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Escherichia coli K12 # 1 85 1 85 85 168 100.0 2e-42 MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVP QIFVDQQHIGGYTDFAAWVKENLDA >gi|299857053|gb|ADWS01000011.1| GENE 63 74665 - 75042 117 125 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_0827 NR:ns ## KEGG: ECIAI39_0827 # Name: ybjM # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 125 1 125 125 217 100.0 1e-55 MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLFFILPGAVASFFSQRRE VLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFWCALGALCFLFISSLFKPQ HRKNQ >gi|299857053|gb|ADWS01000011.1| GENE 64 75312 - 76997 1572 561 aa, chain + ## HITS:1 COG:ECs0927 KEGG:ns NR:ns ## COG: ECs0927 COG2985 # Protein_GI_number: 15830181 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 561 1 561 561 1046 100.0 0 MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVLVVSLLLGQQHFSINTD ALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALVIALGLGKLFGWDIGL TAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLSLGYALTYLIGLVSLIVGARY LPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAYRVGPELVAWTDGKNLRELGIYR QTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHARLDPSFRNGKEVFDRDLLDM RIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGD ARRVKTIADRIGFISIHSQVTDLLAFCAFFVIGLMIGMITFQFSTFSFGMGNAAGLLFAG IMLGFMRANHPTFGYIPQGALSMVKEFGLMVFMAGVGLSAGSGINNGLGAIGGQMLIAGL IVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDTARSNIPALGYAGTYA IANVLLTLAGTIIVMVWPGLG >gi|299857053|gb|ADWS01000011.1| GENE 65 77233 - 77451 170 72 aa, chain - ## HITS:1 COG:no KEGG:B21_00857 NR:ns ## KEGG: B21_00857 # Name: ybl53 # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 72 12 83 83 127 100.0 1e-28 MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP HPMKSGQVALSL >gi|299857053|gb|ADWS01000011.1| GENE 66 77542 - 78540 762 332 aa, chain - ## HITS:1 COG:STM2695 KEGG:ns NR:ns ## COG: STM2695 COG3500 # Protein_GI_number: 16766008 # Func_class: R General function prediction only # Function: Phage protein D # Organism: Salmonella typhimurium LT2 # 1 332 35 366 366 577 88.0 1e-165 MRLTLTDNRGFEADQLDLELDDADGKIALPRRGAVITLALGWKGQPLFPKGAFTVDEIEH TGAPDRLTIRARSADFRETLNTRREKSWHKTTVGEVVKEIAARHKLKMALGNDLSDKPVE HIDQTNESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPVITITRKDGDSH RFTLADRGAYTGVIASWLHTREPSKKESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVL VLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAE WTITTLTHTVSPDNGFTTSLELEVRIDDFEME >gi|299857053|gb|ADWS01000011.1| GENE 67 78639 - 79124 517 161 aa, chain - ## HITS:1 COG:STM2696 KEGG:ns NR:ns ## COG: STM2696 COG3499 # Protein_GI_number: 16766009 # Func_class: R General function prediction only # Function: Phage protein U # Organism: Salmonella typhimurium LT2 # 1 160 1 160 161 264 85.0 4e-71 MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDMLTLSGVLMPEI TGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNLTKTEFFRDGMPRRIEFTLSL KRVDESLSDMFGDLSTQLNNLQDTATSALSDISKTVGGLLS >gi|299857053|gb|ADWS01000011.1| GENE 68 79121 - 82198 2415 1025 aa, chain - ## HITS:1 COG:STM2697 KEGG:ns NR:ns ## COG: STM2697 COG5283 # Protein_GI_number: 16766010 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Salmonella typhimurium LT2 # 1 691 1 669 935 726 67.0 0 MSDNNLRLQVILNAVDKLTRPFRAAQASSKELAGAIRNSRDALKQLNQAGNSLEKFRKLQ ADNKKLGDRLNYARQKANLLSSELEAMEQPSQRHLVALGRQTLAVQRLEEQQKYLQKQTA LVRAELYRAGISAKDDAGATARLARETSRYNQELSKQEARLKRLGEAQRRMNAARASYAR SLEVRDRIAGTGATTTAAGLAMGTPVMAAVKSYTSMEDAMKGVAKQVNGLRDDNGNRTAR FYEMQDAIKAASEQLPMENGAVDFAALVEGGARMNVANPDDSWEDQKRDLLAFASTAAKA ATAFELPADELSESLGKIAQLYKIPTRNIEQLGDALNYLDDNAMSKGADIIDVMQRLGGV ADRLDYRKAAALGSTFLTLGAAPEVAASAANAMVRELSIATMQSKSFFEGMNLLKLNPEV IEKQMTKDAMGTIQRVLEKVNALPQDKRLSAMTMLFGKEFGDDAAKLANNLPELQRQLKL TAGNDALGSMQKESDINKDSLSAQWLLVKTGAQNTFSSLGETLRQPLMDILFTVKSVTGA LRRWVEANPELTGTLMKAAAVVAAVTVGLGTLAVVLAAVLGPLAVIRLGFSVLGIKTLPS VTAAVTRTSSALSWLAGAPLALLRRGLASSGHAAGLLTAPLSSLRRTASLTGNVLKTVAG APVALLRSGLSGLRAVAVMFMNPLAVLRGGLAAAGTVLRVLASGPLAMLRVALYAVSGLL GALLSPIGLVVTALAGVALVVWKYWQPITAFLGGVVEGFKAAAGPVSAAFEPLKPVFQWI GDKVQALWGWFTDLLTPVKSTSAELQSAAAMGRRFGEALAEGLNMVMHPLDSLKSGVSWL LEKLGVVSKEAAKAKLPESVTRQQPATVNTNGKVMMPSGGFPSWGYGFAGMYDSGGYIPR GQFGIVGENGPEIVNGPANVTSRRNTAALAAVVAGMMGVAAAPAELPPLHPLALPAKGGE AMVSRAATVPPVYRIEAPTQIIIQMQPGQSAQDIAREVARQLDERERRLKAKARSNYSDQ GGYDA >gi|299857053|gb|ADWS01000011.1| GENE 69 82325 - 82627 373 100 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1794 NR:ns ## KEGG: ECIAI39_1794 # Name: not_defined # Def: putative phage tail protein E # Organism: E.coli_IAI39 # Pathway: not_defined # 1 100 1 100 100 150 100.0 1e-35 MSDKQTEKTIQLDTPIKRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVNAMMTVIPRIS SPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA >gi|299857053|gb|ADWS01000011.1| GENE 70 82682 - 83197 520 171 aa, chain - ## HITS:1 COG:STM2700 KEGG:ns NR:ns ## COG: STM2700 COG3498 # Protein_GI_number: 16766013 # Func_class: R General function prediction only # Function: Phage tail tube protein FII # Organism: Salmonella typhimurium LT2 # 1 171 1 171 171 317 95.0 8e-87 MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMPGAVDVDLGLDDGALDT EFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAVELVVRGRHKEVDSGEWKT GESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVDLMEAHRNALGL >gi|299857053|gb|ADWS01000011.1| GENE 71 83207 - 84379 997 390 aa, chain - ## HITS:1 COG:STM2701 KEGG:ns NR:ns ## COG: STM2701 COG3497 # Protein_GI_number: 16766014 # Func_class: R General function prediction only # Function: Phage tail sheath protein FI # Organism: Salmonella typhimurium LT2 # 1 390 1 390 390 704 90.0 0 MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFPLNKPVLITDVLTASGK AGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIGAVTAEGKKTGMKALLSAQ SQLGVKPRILGVPGHDNKAVATELLGVAQSLRGFAYLSAYGCKTVQEAITYRENFSQREG MLIWPDFTGWDTVLNADATAYATARALGLRAKIDEQTGWHKSLSNVGVNGVTGISADVFW DLQDPATDAGLLNQNDVTTLIRKDGFRFWGSRCLSDDPLFAFENNTRTAQVLMDTMAEAP MWAVDKPLNPSLARDIIEGIRAKMRSLISQGYLIGGDCWLDESVNDKDTLKAGKLTIDYD YTPVPPLENLMLRQRITDQYLVNFSSQVSA >gi|299857053|gb|ADWS01000011.1| GENE 72 84486 - 84899 279 137 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A0941 NR:ns ## KEGG: EcHS_A0941 # Name: not_defined # Def: putative tail fiber assembly protein # Organism: E.coli_HS # Pathway: not_defined # 1 137 1 137 137 238 94.0 7e-62 MNASYAVIENGMVVNVIVWDGEDEFTVPDNLQLINISDISEQPGIGWAYSDGVFTAPPTP ERSHDELVADAEQKKQSLIDAAMVNISVIQLKLQAGRKLTQEETTRLNVVLDYIEAVTAT DTSTAPDIIWPVFPASR >gi|299857053|gb|ADWS01000011.1| GENE 73 84899 - 86818 861 639 aa, chain - ## HITS:1 COG:STM4200 KEGG:ns NR:ns ## COG: STM4200 COG5301 # Protein_GI_number: 16767450 # Func_class: R General function prediction only # Function: Phage-related tail fibre protein # Organism: Salmonella typhimurium LT2 # 1 378 1 373 581 333 55.0 5e-91 MSTKFYTLLTDIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPDAKQTALVNEKRRAAL NMLYIDPQNSSQIIAEQVIPENEGGWWIREVGLFDESGALIAVGNCPESYKPQLAEGSGR TQTVRMVLITSSTDNIILKIDPAVVLATRKYVDDKISEHEQSRRHPDASLTAKGFTQLSS ATNSESEILAATPKAVKAAYDLAAGKASASHTHPWNQITGVPAASLTVKGTVQLSSATNS TSETQAATPKAVKAVYDLAAGKAPVSHTHPWNQITDVPAASLTVKGTVQLSSATNSTSET QAATPKAVKAAYDLAAGKAPVSHTHPWSQITDVPAASLTVKGTVQLSSATNSTSETQAAT PKAVKAVYDLANGKQPADATLTALAGLATAADKLPYFTGNDTASLTTLTNVGRDILAKTS KQEVIRYLGLGDTSGYVGRRLSTRAFASSGTYTPSPETKRIRVTITGGGGGGGGCKATSN NETFFGAGGGAGGTIISIMTPTQNSYPVTIGAGGAGGVSATNGTRGGNSVFASLIAPGGE GGGKVGVTNTNGGNGGVPSTGDIRITGGDGGDGQSGNIGVSGEGGTSYWGGGGRAGAGGG VRGRAFGSGGGGAYDAGYSGTSMTGGKGADGVCIIEEFA >gi|299857053|gb|ADWS01000011.1| GENE 74 86815 - 87420 498 201 aa, chain - ## HITS:1 COG:STM2707 KEGG:ns NR:ns ## COG: STM2707 COG4385 # Protein_GI_number: 16766020 # Func_class: R General function prediction only # Function: Bacteriophage P2-related tail formation protein # Organism: Salmonella typhimurium LT2 # 1 201 1 201 201 392 92.0 1e-109 MNSLLPPGSTPLERRLAQTCSGISDLQVPLRDLWNPATCPVSFLPYLAWAFSVDRWDEGW TESVKRQVVKDAFYIHQHKGTTSAVRRVVEPFGFLIRIIEWWQTGEAPGTFRLDIGVQDQ GITEDTYLELERLISDAKPCSRHMIGMSINLQTSGPHWVGAASYLGEEITIYPYINETII SGGTAHEGGAVHVIDTMRVNP >gi|299857053|gb|ADWS01000011.1| GENE 75 87413 - 88321 902 302 aa, chain - ## HITS:1 COG:STM2708 KEGG:ns NR:ns ## COG: STM2708 COG3948 # Protein_GI_number: 16766021 # Func_class: R General function prediction only # Function: Phage-related baseplate assembly protein # Organism: Salmonella typhimurium LT2 # 1 302 1 302 302 468 90.0 1e-132 MAVIDLSQLPAPQIVDVPDFETLLAERKAGFVALHPKDEQEAVIRTLELESEPVTKLLQE NAYRELLLRQRINEAAQAVMVAYAMGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMES DEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASATSPAPAEVVLTVLSREGDGT AEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLEDVVLNKTQAASCTQWSVTNGGT DE >gi|299857053|gb|ADWS01000011.1| GENE 76 88308 - 88667 332 119 aa, chain - ## HITS:1 COG:STM2709 KEGG:ns NR:ns ## COG: STM2709 COG3628 # Protein_GI_number: 16766022 # Func_class: R General function prediction only # Function: Phage baseplate assembly protein W # Organism: Salmonella typhimurium LT2 # 1 118 1 118 119 190 84.0 7e-49 MTLYSGMNNTNGKAITDIDHLRQSVRDILLTPQGSRIARREYGSLLSALIDQPQNPALRL QVMSAVYVALSRWEPRLTLDSITINSNFDGSMVVELTGRRNNGVPVSLSVSTGAENGSD >gi|299857053|gb|ADWS01000011.1| GENE 77 88664 - 89218 465 184 aa, chain - ## HITS:1 COG:STM2710 KEGG:ns NR:ns ## COG: STM2710 COG4540 # Protein_GI_number: 16766023 # Func_class: R General function prediction only # Function: Phage P2 baseplate assembly protein gpV # Organism: Salmonella typhimurium LT2 # 1 184 9 192 192 301 83.0 4e-82 MRLITNLIRTGVVTEVDRANWLCRVKTGDLETNWINWLTLRAGKSRTWWKPSVGEQVVLF SLGGNLETAFALPAVYSNQFPPPSGSEDGNVTEYPDGGWFEYEPATGRWYVRGIKSMVIE AADNITMKTSEFVLEADRTRINSEVVINGGVTQGGGAMSSNGIVVDAHQHTGVLKGGDTT GGPV >gi|299857053|gb|ADWS01000011.1| GENE 78 89613 - 89768 58 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLIIASNLCIPSNISLCSLMVTNNNNGIGYCCSIEDIKEVFSSRDHTSFL >gi|299857053|gb|ADWS01000011.1| GENE 79 90553 - 91296 196 247 aa, chain + ## HITS:1 COG:alr1266 KEGG:ns NR:ns ## COG: alr1266 COG1479 # Protein_GI_number: 17228761 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 4 241 358 597 599 108 29.0 1e-23 MQLIDKEGLFSQLKNTGNTIIMVTDGGRWAASTREKSVNDLVALISRYFQPAPQKYVNHA WVTEIRNLLTNSRTEQPSYDFKQGFFNLSGKNEFDDECLKGILQTCVAINNIGKSAKGYI LVGIAENKLTADRIQHLYGVNSIEFNGFYINGIDHEAMLVSGSIDDYFMLIKQKIQGYNF TETLKQQILKNIEFCSYNGLHILKITIQSTGQICDFENMFYIRQGSSTDPVTDTQKISAL FNSYMNS >gi|299857053|gb|ADWS01000011.1| GENE 80 91372 - 91689 133 105 aa, chain - ## HITS:1 COG:no KEGG:LF82_p394 NR:ns ## KEGG: LF82_p394 # Name: not_defined # Def: phage tail protein # Organism: E.coli_LF82 # Pathway: not_defined # 1 95 44 138 150 135 83.0 6e-31 MQRNPDGSSYEPRRVTARSKKGRIKRQMFTKLRTTKYLKTAASADSASVQFEGMVQRIAR VHHYGLRDRVNKKGLIAKYPQRTLLGLSYKTEENIIMSIKEELSK >gi|299857053|gb|ADWS01000011.1| GENE 81 91811 - 92242 407 143 aa, chain - ## HITS:1 COG:no KEGG:SeD_A3040 NR:ns ## KEGG: SeD_A3040 # Name: gpr # Def: phage tail completion protein R # Organism: S.enterica_Dublin # Pathway: not_defined # 1 143 1 143 143 277 100.0 1e-73 MNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVATGASSMSWEYRYTLNAVIEDFSGD QNLLMAPVLLWLRDNQPDAINNPALREKLFTFEVDILRNDVCDISLNLQLTERVLVSTDG SVSSVEAVAEPDEPEEMWTVKRG >gi|299857053|gb|ADWS01000011.1| GENE 82 92338 - 92766 291 142 aa, chain - ## HITS:1 COG:no KEGG:B21_00843 NR:ns ## KEGG: B21_00843 # Name: ybl39 # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 142 1 142 142 185 95.0 5e-46 MTRALAVVVALALVALGWQSWRLNSASHTIETQRAALKSKAQELTKKNSQLIGLSILAET NNREQARLYAEAEQTSALLRQRQRRIEELKRENEDLRRWADTPLPADIIRLRERPALTGG AAYRQWLSASDAVSAGAGSAAH >gi|299857053|gb|ADWS01000011.1| GENE 83 92763 - 93278 299 171 aa, chain - ## HITS:1 COG:STM2715 KEGG:ns NR:ns ## COG: STM2715 COG3772 # Protein_GI_number: 16766028 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Salmonella typhimurium LT2 # 1 168 1 168 169 319 92.0 2e-87 MNPSIVKRCLVGAVLAIAATLPGFQQLHTSVEGLKLIADYEGCRLQPYQCSAGVWTDGIG NTSGVIPGKTITERQAAEGLISNVLRVERALERCVKQQPPQKVYDAVVSFAFNVGTGNAC SSTLVKLLNQRRWADACRQLPRWVYVKGVFNQGLDNRRAREMAWCLKGAGL >gi|299857053|gb|ADWS01000011.1| GENE 84 93259 - 93474 255 71 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2829 NR:ns ## KEGG: ECS88_2829 # Name: not_defined # Def: putative secretory protein # Organism: E.coli_S88 # Pathway: not_defined # 1 71 1 71 71 133 100.0 2e-30 MTLERISAFITYCIAVVLAWLGDLSIKDASTLGGLMIGVLMLAINWYYKHKAYQLLRDGQ ISREDYESINR >gi|299857053|gb|ADWS01000011.1| GENE 85 93478 - 93681 157 67 aa, chain - ## HITS:1 COG:STM2717 KEGG:ns NR:ns ## COG: STM2717 COG5004 # Protein_GI_number: 16766030 # Func_class: R General function prediction only # Function: P2-like prophage tail protein X # Organism: Salmonella typhimurium LT2 # 1 67 1 67 67 124 92.0 4e-29 MKVRAHQYDTVDALCWRHYGRTQGVTEQVLKANPGLAEYGPFLPHGLQVELPDIPTTTTV QTVQLWD >gi|299857053|gb|ADWS01000011.1| GENE 86 93681 - 94145 430 154 aa, chain - ## HITS:1 COG:no KEGG:ECED1_3085 NR:ns ## KEGG: ECED1_3085 # Name: L # Def: head completion/stabilization protein (GpL) # Organism: E.coli_ED1a # Pathway: not_defined # 1 154 22 175 175 294 99.0 8e-79 MKFVAPEQAPEQAEIIRNTPFWPDVDLSEFRSVMRTDGTVTQPRLKQVALSAISEVNAEL YEFRRRQQMLGYASLAEVPAELLDGKSERIQHYFNAVYCWARAMLNERYQDYDATASGVK RGEELAEASGDLWRDARWAISRVQDAPHCTVELI >gi|299857053|gb|ADWS01000011.1| GENE 87 94241 - 94891 622 216 aa, chain - ## HITS:1 COG:no KEGG:ECED1_3086 NR:ns ## KEGG: ECED1_3086 # Name: M # Def: terminase, endonuclease subunit (GpM) # Organism: E.coli_ED1a # Pathway: not_defined # 1 216 1 216 216 381 99.0 1e-105 MSLSPARQHRLRVQAEQAAREGGSVRHASGYDLMLLQLAEDRRRLKGVQSTVKKAEIKVE LLPKYAAWAEGVLAAGGTQQDDVLMYVMLWRIDAGDYAGALEIGRHALRHGWVMPLGNRN VQTVLAEEMADAAQSAMLAATGFDADLLLQTLELTDGLDMPDQSRARLHKAIGAVLSESN PASALNHLNHALQLDPRCGVKKDKQQLERRLRNDSR >gi|299857053|gb|ADWS01000011.1| GENE 88 94895 - 95953 1265 352 aa, chain - ## HITS:1 COG:no KEGG:SeD_A3048 NR:ns ## KEGG: SeD_A3048 # Name: not_defined # Def: phage major capsid protein, P2 family # Organism: S.enterica_Dublin # Pathway: not_defined # 1 344 1 344 352 668 99.0 0 MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINVTPV TEQSGQLLGLGVGSTIAGTTDTTAKEREPVDPTLMVDVEYKCEQTNFDTVLTYAKLDLWA KFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSENPLLQDVNKGWLQKIREDAPD HVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNELIDMVYQDDDDLVVICGRELLS DKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRAPFFPPNALLITRLDNLSIYWQEDT RRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIQIGDFSAAAAETGA >gi|299857053|gb|ADWS01000011.1| GENE 89 95970 - 96803 956 277 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A0925 NR:ns ## KEGG: EcHS_A0925 # Name: not_defined # Def: phage capsid scaffolding protein # Organism: E.coli_HS # Pathway: not_defined # 1 277 1 277 277 480 99.0 1e-134 MTVKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALINLEHIKSYLPDSTFNRY GKVTALFAEEITEGPLAGKMALYADVEPTESLVELVKKGQKLFTSMEVSPKFADTGKAYL VGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFTAAEETVIELEEIQDDKPSLF ARVTALFTKKEQSDDARFSDVHKAVELVATEQQNLSARTEKSLSEQEERLSELETALQAQ QAAFNELVDKLSHEDSRQDYRQRATGGNAPADTLTNC >gi|299857053|gb|ADWS01000011.1| GENE 90 96946 - 98712 1495 588 aa, chain + ## HITS:1 COG:RSc1939 KEGG:ns NR:ns ## COG: RSc1939 COG5484 # Protein_GI_number: 17546658 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 11 491 17 496 506 687 68.0 0 MNTTLTLADLDPRRQAMLLYFQGYRVARIAEMLGEKVSTVHSWKKRDKWGDYGPLDQMQL TTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNGGNEADLNPNVANRNKGPR RQPEKNVFTDEQIEKLEEIFHSSMFNYQRHWWEAGKTNRIRNLLKSRQIGATFYFAREAL IDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVELKGDPMVLPNGATLYFLGTNART AQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWRQTYFSTPSSLTHSAYPFWSGALFN RGRNKADKVDIDLSHSNLAPGLLCADGQYRQIVTVEDAVRGGCNLFDLDQLRMEYSPDEY QNLLMCEFVDDLASVFPLSELQACMVDSWEVWTDFHALALRPFGWREVWIGYDPAKGTQN GDSAGCVVVAPPAVPGGKFRILERHQWRGMDFRAQADAIKKLTEQYNVTYIGIDSTGVGH GVYENVKAFFPAVREFVYNPNVKNALVLKAYDIISHRRLEFDAGHTDIAQSFMAIRRATT ASGNRPTYEASRSEEASHADLAWATMHALFNEPLQGESANTSNIVEIF >gi|299857053|gb|ADWS01000011.1| GENE 91 98712 - 99779 673 355 aa, chain + ## HITS:1 COG:STM2723 KEGG:ns NR:ns ## COG: STM2723 COG5518 # Protein_GI_number: 16766036 # Func_class: R General function prediction only # Function: Bacteriophage capsid portal protein # Organism: Salmonella typhimurium LT2 # 22 343 24 345 346 608 88.0 1e-174 MGKSKKNRAAATKQIQLKSQTTAEAFSFGDPVPVLDRRELLDYVECVQMDRWYEPPVSFD GLARTFRAAVHHSSPIAVKCNILTSTYISHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRF GEVIALEPALAKYTRRGLDLDTYWFVQYGMATQPYQFTKGSIFHLMEPDINQEIYGLPGY LSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNLRNAMKSAKGPGNFR NLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIIPQNIGGF GDVSKASKVFVRNELTPLQRRIQELNEWLCDEVIKFDPYKLDIEDNNHSAIIPII >gi|299857053|gb|ADWS01000011.1| GENE 92 99864 - 100370 229 168 aa, chain + ## HITS:1 COG:no KEGG:Msip34_1475 NR:ns ## KEGG: Msip34_1475 # Name: not_defined # Def: hypothetical protein # Organism: Methylovorus_SIP3-4 # Pathway: not_defined # 1 159 68 221 333 76 33.0 4e-13 MDIEKLKEFYEKLYFQETENKDKIYNRIQMIFGLIVIDATIVTYLLKNTSFENHAFFACI VIGLSLLSVFFIYKACMLLKKAFWGNEFKYIPKPKEIDEYYNGLIKYEADYKKYCDNNGL TYNGEHSSSKKFNEYLVKQLVECTSWNTKKNEMRTSQIYRATKFFFSH >gi|299857053|gb|ADWS01000011.1| GENE 93 101283 - 101708 239 141 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSFYVLILILVASFVSVPVQAVTAKNYEKGTKAQQKSISYLSCAFYGSSTQLDPSYTEQ VPTADIKILQKAAYHAYNDALSYFGYEEPDHEQRIIDYAEFVASQEAVLWDKPGMNGKQV TLIARSLYNESNCNLLLDSIK >gi|299857053|gb|ADWS01000011.1| GENE 94 101868 - 102101 311 77 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2838 NR:ns ## KEGG: ECS88_2838 # Name: not_defined # Def: putative DinI-like damage-inducible protein # Organism: E.coli_S88 # Pathway: not_defined # 1 77 25 101 101 132 100.0 3e-30 MRIEIMIDKEQKISQSTLDALESELYRNLRPLYPKTVIRIRKGSSNGVELTGLQLDEERK QVMKIMQKVWEDDSWLH >gi|299857053|gb|ADWS01000011.1| GENE 95 102112 - 102300 109 62 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2839 NR:ns ## KEGG: ECS88_2839 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 62 35 96 96 120 100.0 2e-26 MQDYFLESLKLQRIDFFLKLVAASECSDEEKGLALQWVSELTDELMAKIRTHEYNRSMDV IS >gi|299857053|gb|ADWS01000011.1| GENE 96 102453 - 104867 1538 804 aa, chain - ## HITS:1 COG:no KEGG:t3410 NR:ns ## KEGG: t3410 # Name: not_defined # Def: endonuclease # Organism: S.typhi_Ty2 # Pathway: not_defined # 1 804 1 804 804 1587 98.0 0 MSHADMNNCSGFNEAAAAFSWNSPKKAINPYLDPAEVAPVSALSNLITLYAADNEQEQLR REALSDQVWERYFFNESRDPVQREMEQDKFISRAKLAHEQQRFNPDMVILADVNAQPSHI SRPLMQRIEYFSSLGRPKAYSRYLRETIKPCLERLEHVRDSQLSTSFRFMASHEGLDGLL ILPEMSQDQVKRLSTLVAAHMSMCLDAACGDLYATDDVKPEEIRKTWEKVAAETLRLDVI PPAFEQLRRKRNRRKPVPYELIPGSLARMLCADWWYRKLWKMRCEWREEQLRAVCLVSKK ASPYVSYEAMMHKREQRRKSLEFFRSHELVNEDGDTLDMEDVVNASSSNPAHRRNEMMAC VKGLELIAEMRGDCAVFYTITCPSRFHSTLNNGRPNPTWTNTTVRQSSDYLVGMFAAFRK AMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRTITALLRKFAIREDREELGNNTG PRFKSELINPRKGTPTSYIAKYISKNIDGRGLAGEISKETGKSLRDNAEYVNAWASLHRV QQFRFFGIPGRQAYRELRLLAGQAARQQGDKKAGAPVLDNPRLDAILAAADAGCFATYIM KQGGVLVPRKYHLIRTAYEINEEPTAYGDHGIRIYGIWSPIAEGKICTHAVKWKMVRKAV DVQEAAADQGACAPWTRGNNCPLAENLNQQGKDKSADGDTRTDITRMDDKELHDYLHSMS KKERRELAARLRLVKPKRRKDYKQRITDHQRQQLVYELKSRGFNGSEKEVDLLLRGGSIP SGAGLRIFYRNQRLQEDDKWRNLY >gi|299857053|gb|ADWS01000011.1| GENE 97 104864 - 105721 429 285 aa, chain - ## HITS:1 COG:STM2730 KEGG:ns NR:ns ## COG: STM2730 COG0338 # Protein_GI_number: 16766042 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Salmonella typhimurium LT2 # 1 285 1 283 285 424 73.0 1e-119 MSTILKWAGNKTAIMSELKKHLPAGPRLVEPFAGSCAVMMETDYPSYLVADINPDLINLY KKVAADCEAFISRARALFEEANRELAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYRGL CRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQQATFICASFDETLAMLQVGDVVYCDP PYDGTFSGYHTNGFTEDDQYHLASVLEYRSSEGHPVIVSNSDTSLIRSLYRNFTHHYIKA QRSIGVSAGESKSATEIIAVSGARCWVGFDPSRGVDSSAVYGVRA >gi|299857053|gb|ADWS01000011.1| GENE 98 105718 - 105945 269 75 aa, chain - ## HITS:1 COG:STM2731 KEGG:ns NR:ns ## COG: STM2731 COG1734 # Protein_GI_number: 16766043 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Salmonella typhimurium LT2 # 1 75 1 75 75 124 90.0 5e-29 MADAMDLVQQRVEEERQRHIRAARAKTPGVSRVLCIECEAPIPPARRRAIPGVQLCITCQ EIAELKGKHYNGGAV >gi|299857053|gb|ADWS01000011.1| GENE 99 105945 - 106178 309 77 aa, chain - ## HITS:1 COG:no KEGG:t3407 NR:ns ## KEGG: t3407 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi_Ty2 # Pathway: not_defined # 1 77 1 77 77 99 90.0 3e-20 MRNIEILTTKTGSDDAGLNILLTVARLEERRARAEAMAARLDSLACHISSRQLNHVEAAE LLRVTAEAIQNEAQEIH >gi|299857053|gb|ADWS01000011.1| GENE 100 106246 - 106587 169 113 aa, chain - ## HITS:1 COG:no KEGG:E2348C_0805 NR:ns ## KEGG: E2348C_0805 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 1 113 1 113 113 201 100.0 7e-51 MAIEGAAATVPLSPGERLNGLNHIAELRAKVFGLNIESELERFIKDMRDPRDINNEQNKR ALAAIFFMAKIPAERHSISINELTTDEKRELIKAMNHFRAVVSLFPRRLTMPN >gi|299857053|gb|ADWS01000011.1| GENE 101 106551 - 106751 118 66 aa, chain - ## HITS:1 COG:no KEGG:ECB_00820 NR:ns ## KEGG: ECB_00820 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 66 14 79 79 129 100.0 3e-29 MLTKEPSFASLLVKQSPAMHYGHGWIMGEDGKRWHPCRSQDELLAELSTKKRGNKWLLKA LRRLFH >gi|299857053|gb|ADWS01000011.1| GENE 102 106759 - 107268 485 169 aa, chain - ## HITS:1 COG:no KEGG:c0936 NR:ns ## KEGG: c0936 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 169 19 187 187 327 100.0 1e-88 MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLNPAQPHLLTAPEIWLLT DLTEDSTLVDGFLAQIHCLPCVPINEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTSAG RRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVTGLGASFGLL >gi|299857053|gb|ADWS01000011.1| GENE 103 107301 - 107522 261 73 aa, chain - ## HITS:1 COG:no KEGG:B21_00834 NR:ns ## KEGG: B21_00834 # Name: ybl30 # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 73 1 73 73 122 100.0 5e-27 MRPNISITLTTPHVTIERYSELTGLSIDTINDMLADGRLIRHRLRKDKKREKVMINIAAM TVDALSECNLNLN >gi|299857053|gb|ADWS01000011.1| GENE 104 107888 - 108217 112 109 aa, chain + ## HITS:1 COG:no KEGG:SBO_0748 NR:ns ## KEGG: SBO_0748 # Name: not_defined # Def: repressor protein # Organism: S.boydii # Pathway: not_defined # 1 109 81 189 189 216 96.0 2e-55 MEVAKYVLSDGALREDGFYIFDKGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVIS IDGEITIRDITRLPGGRIFVEGGNRTFECKIEDVEIIGKIISLTIKYVR >gi|299857053|gb|ADWS01000011.1| GENE 105 108611 - 109642 369 343 aa, chain + ## HITS:1 COG:STM2739 KEGG:ns NR:ns ## COG: STM2739 COG0582 # Protein_GI_number: 16766051 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 1 337 1 338 341 375 53.0 1e-104 MAVRKLTTGKWLCECYPAGRSGRRVRKQFATKGEALAFERHTMEETEAKPWLGESVDRRT LKDVVELWFKLHGKSLTAGQHVYDKLLLMVDALGNPLATDLTSKMFAHYRDKRLTGEIYF SEKWKKGASPVTINLEQSYLSSVFSELSRLGEWSYPNPLENMRKFTIAEKEMAWLTHEQI VELLDDCKRQDPILALVVKICLSTGARWREAINLTRSQVTKYRITFVRTKGKKNRSIPIS KELYEEIMALDGFNFFTDCYFQFLSVMEKTSIVLPRGQLTHVLRHTFAAHFMMSGGNILA LQKILGHHDIKMTMRYAHLSPDHLETALRFNPLATLDVTKSDS >gi|299857053|gb|ADWS01000011.1| GENE 106 110067 - 110375 120 102 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSTSHYSNIKKITKLRNSCAHNDAKYLENDGQNIKSIIELIEKYPDFFKKDGKQVLFME GSLSMILNSFKEYLSDVERALDEFEKQSTSGDKVAAAVGITP >gi|299857053|gb|ADWS01000011.1| GENE 107 110479 - 111015 470 178 aa, chain - ## HITS:1 COG:ECs0926 KEGG:ns NR:ns ## COG: ECs0926 COG3226 # Protein_GI_number: 15830180 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 178 1 178 178 340 100.0 7e-94 MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDELLLEAF SSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLK TVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERVAG >gi|299857053|gb|ADWS01000011.1| GENE 108 111099 - 112307 1103 402 aa, chain + ## HITS:1 COG:ybjJ KEGG:ns NR:ns ## COG: ybjJ COG0477 # Protein_GI_number: 16128813 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 402 1 402 402 663 99.0 0 MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPTIRDILSVSIAEMGGVLFGLSIGS MSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTSPLLFAVGLGVFGASFGSA EVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMALTAFGVPATVHILLAALVGI APIYIAIQAIPDGTGKNAADGTQHGEKGIPFYRDIQLLLIGVVVLAMAFAEGSANDWLPL LMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFIDRYSRVAVVRASALMGALGIGLIIF VDSAWVAGVSVVLWGLGASLGFPLTISAASDTGPDAPTRVSVVATTGYLAFLVGPPLLGY LGEHYGLRSAMLVVLALVILAAIVAKAVAKPDTKTQTAMENS >gi|299857053|gb|ADWS01000011.1| GENE 109 112307 - 113122 846 271 aa, chain + ## HITS:1 COG:ybjI KEGG:ns NR:ns ## COG: ybjI COG0561 # Protein_GI_number: 16128812 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 10 271 1 262 262 516 98.0 1e-146 MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIAN EIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEVEIIACGKNSAYTLKKYDD AMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQVQKALHEAIGDIMVPVHTGN GSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFAMENAGNAVV AAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ >gi|299857053|gb|ADWS01000011.1| GENE 110 113214 - 113492 226 92 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0887 NR:ns ## KEGG: ECO103_0887 # Name: ybjH # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 92 3 94 94 127 100.0 9e-29 MKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPA PAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH >gi|299857053|gb|ADWS01000011.1| GENE 111 113533 - 114765 1245 410 aa, chain - ## HITS:1 COG:ECs0922 KEGG:ns NR:ns ## COG: ECs0922 COG0477 # Protein_GI_number: 15830176 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 717 99.0 0 MQNKLASGARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTA YLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIITCLAILLAQNIEQFTLLRFLQGISLC FIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAAL AAISFFGLQQAMPETATRIGEKLSLKELGRDYKLVLKNGRFVAGALALGFVSLPLLAWIA QSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIIIGLL VAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLI FTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMVIFLKDKQMGNSHEG >gi|299857053|gb|ADWS01000011.1| GENE 112 115050 - 115646 515 198 aa, chain + ## HITS:1 COG:ECs0921 KEGG:ns NR:ns ## COG: ECs0921 COG0671 # Protein_GI_number: 15830175 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 198 1 198 198 355 99.0 3e-98 MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAAVLWLWGLTAQRQLVIKI AIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWH RLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQ SWYRFCFALPIRKGWVRD >gi|299857053|gb|ADWS01000011.1| GENE 113 115704 - 116462 655 252 aa, chain + ## HITS:1 COG:ECs0920 KEGG:ns NR:ns ## COG: ECs0920 COG1349 # Protein_GI_number: 15830174 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 525 99.0 1e-149 METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLGGYIVLEP RSASHYLLSDQKSRLVEEKRRAAKMAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAV CYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSK GATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPARMGDLKRFDIVVSDCCPEDEYV KYAQTHRIKLMY >gi|299857053|gb|ADWS01000011.1| GENE 114 116509 - 117732 1256 407 aa, chain - ## HITS:1 COG:ECs0919 KEGG:ns NR:ns ## COG: ECs0919 COG1686 # Protein_GI_number: 15830173 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 # 8 407 1 400 400 795 100.0 0 MDTRVAFMTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVL AEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFL KPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVH GLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDG MKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKP DATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGT IDFQLNGKSIEQRPLIVMENVEEGGFFGRMWDFVMMKFHQWFGSWFS >gi|299857053|gb|ADWS01000011.1| GENE 115 117958 - 118584 604 208 aa, chain + ## HITS:1 COG:ECs0918 KEGG:ns NR:ns ## COG: ECs0918 COG0625 # Protein_GI_number: 15830172 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 208 3 210 210 398 99.0 1e-111 MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDE SDLILWESNAIVRYLAAQYGQKSLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRT PPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTW TPRPNLQRWYQQLTERPAVRKVVMIPVS >gi|299857053|gb|ADWS01000011.1| GENE 116 118581 - 119147 504 188 aa, chain - ## HITS:1 COG:ECs0917 KEGG:ns NR:ns ## COG: ECs0917 COG2133 # Protein_GI_number: 15830171 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose/sorbosone dehydrogenases # Organism: Escherichia coli O157:H7 # 1 188 184 371 371 383 99.0 1e-106 MRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINI PQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQ WQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGE LLKVSPRN >gi|299857053|gb|ADWS01000011.1| GENE 117 119138 - 119551 209 137 aa, chain - ## HITS:1 COG:ECs0917 KEGG:ns NR:ns ## COG: ECs0917 COG2133 # Protein_GI_number: 15830171 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose/sorbosone dehydrogenases # Organism: Escherichia coli O157:H7 # 1 114 49 162 371 229 98.0 1e-60 MLITLRGGELRHWQVGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVG DDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFLLWAKTI SARRRRIWINYRANWCV >gi|299857053|gb|ADWS01000011.1| GENE 118 119806 - 120189 248 127 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_0907 NR:ns ## KEGG: EcE24377A_0907 # Name: bssR # Def: biofilm formation regulatory protein BssR # Organism: E.coli_E24377A # Pathway: not_defined # 1 127 12 138 138 226 100.0 2e-58 MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRDNFFKLNRELHDKSLRL NLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNADKLENCLMSLTLSIQSLQK HAMLEKA >gi|299857053|gb|ADWS01000011.1| GENE 119 120402 - 121727 1844 441 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|183179613|ref|ZP_02957824.1| conserved hypothetical protein [Vibrio cholerae MZO-3] # 9 439 34 464 470 714 77 0.0 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP GDILRVKVEHADEYDLWGSRV >gi|299857053|gb|ADWS01000011.1| GENE 120 121774 - 123102 989 442 aa, chain - ## HITS:1 COG:Z1058_2 KEGG:ns NR:ns ## COG: Z1058_2 COG2199 # Protein_GI_number: 15800584 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 EDL933 # 261 442 1 182 182 367 99.0 1e-101 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA IDLINTLNPTEEQLLVGLRTVYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA VISGTSCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV DKGKIYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECTTVERL KMLADERLYKSKKNGRAQISWQ >gi|299857053|gb|ADWS01000011.1| GENE 121 123110 - 125458 1443 782 aa, chain - ## HITS:1 COG:yliE_2 KEGG:ns NR:ns ## COG: yliE_2 COG2200 # Protein_GI_number: 16128801 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 526 782 1 257 257 531 100.0 1e-150 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLR INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN SEGNYNIIDSVDTEYIAKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV VYFMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLV KE >gi|299857053|gb|ADWS01000011.1| GENE 122 125636 - 126505 795 289 aa, chain - ## HITS:1 COG:ECs0911 KEGG:ns NR:ns ## COG: ECs0911 COG1173 # Protein_GI_number: 15830165 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 289 15 303 303 536 100.0 1e-152 MPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWIAPYDAENYFDYDNL NNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWD RLIMRICDVLFAFPGILLAIAVVAVLGSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQT FIESARSIGASDMTILLRHILPGTVSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEW GAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPKIKG >gi|299857053|gb|ADWS01000011.1| GENE 123 126550 - 127470 943 306 aa, chain - ## HITS:1 COG:yliC KEGG:ns NR:ns ## COG: yliC COG0601 # Protein_GI_number: 16128799 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli K12 # 1 306 1 306 306 563 100.0 1e-160 MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEADAQVIELVRQQLGLDQP LYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGIIA AVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELGWLPTVGADSWQHYILPSLTL GAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAIN PAIRYK >gi|299857053|gb|ADWS01000011.1| GENE 124 127488 - 129026 1660 512 aa, chain - ## HITS:1 COG:ECs0909 KEGG:ns NR:ns ## COG: ECs0909 COG0747 # Protein_GI_number: 15830163 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 512 1 512 512 987 99.0 0 MARAVHRSGLVAQGIATALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQ GLFGLDKEMKLKNVLAESYTVSDDGITYIVKLREGIKFQDGTDFNAVAVKANLDRASDPA NHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGF HPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQF AFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVK VAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTA QKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWAL SPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPL VVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ >gi|299857053|gb|ADWS01000011.1| GENE 125 129046 - 130917 844 623 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 12 572 8 528 563 329 35 4e-89 MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTAL ALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPV FTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIA MALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVL VMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAP PIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESG SGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTI GDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALAL NPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLG QIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAV SLQCVGPGHYVAQPQSEYAFMRR >gi|299857053|gb|ADWS01000011.1| GENE 126 130904 - 131869 989 321 aa, chain - ## HITS:1 COG:ybiK KEGG:ns NR:ns ## COG: ybiK COG1446 # Protein_GI_number: 16128796 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Escherichia coli K12 # 1 321 1 321 321 581 99.0 1e-166 MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLL EECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHV MMIGEGAENFAFARGMERVSPEIFSTPLRYEQLLAARKEGATVLDHSGAPLDEKQKMGTV GAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRAL AAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWG YAGDTPTTGIYREKGDTVATQ >gi|299857053|gb|ADWS01000011.1| GENE 127 132073 - 133308 1181 411 aa, chain + ## HITS:1 COG:moeA KEGG:ns NR:ns ## COG: moeA COG0303 # Protein_GI_number: 16128795 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Escherichia coli K12 # 1 411 1 411 411 790 99.0 0 MEFTTGLMSLDTALNKMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDG YAVRLADIASRQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQT DNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRV ALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEA DSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGN PVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGE LEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVDVGEWVEVEPFNALFGGL >gi|299857053|gb|ADWS01000011.1| GENE 128 133308 - 134057 829 249 aa, chain + ## HITS:1 COG:moeB KEGG:ns NR:ns ## COG: moeB COG0476 # Protein_GI_number: 16128794 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Escherichia coli K12 # 1 249 1 249 249 485 98.0 1e-137 MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLVVGLGGLGCAASQYLASAGVGNLTL LDFDTVSLSNLQRQTLHSDATVGQPKVESARYALTRINPHIAITPVNALLDDAELAALIA EHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYRCLSRLF GENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAGYGKPASGKIVMYDAMTCQFREMKLMR NPGCEVCGQ >gi|299857053|gb|ADWS01000011.1| GENE 129 134236 - 134904 814 222 aa, chain - ## HITS:1 COG:ECs0903 KEGG:ns NR:ns ## COG: ECs0903 COG0176 # Protein_GI_number: 15830157 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 222 23 244 244 397 97.0 1e-111 MVMELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLPQLHEAMGGQGRLFA QVMATTAEGMVNDARKLRSIIADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGL LSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAASFKTPRQALDCLL AGCESITLPLDVAQQMISYPAVDAAVAKFEQDWLGAFGRTSI >gi|299857053|gb|ADWS01000011.1| GENE 130 135029 - 135928 1000 299 aa, chain + ## HITS:1 COG:ybiY KEGG:ns NR:ns ## COG: ybiY COG1180 # Protein_GI_number: 16128792 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 1 299 10 308 308 600 100.0 1e-171 MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDLLYDARLCLEGCELCAK AAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGEVKSVEEIMTTVLRDKPFY DRSGGGLTLSGGEPFMQPEMAMALLQASHEAGIHTAVETCLHVPWKYIAPSLPYIDLFLA DLKHVADAPFKQWTDGNAARVLDNLKKLAAAGKKIIIRVPLIQGFNADETSVKAITDFAA DELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLDAPELLDFAQQYACQKGLTATLRG >gi|299857053|gb|ADWS01000011.1| GENE 131 135934 - 138366 2773 810 aa, chain + ## HITS:1 COG:ybiW KEGG:ns NR:ns ## COG: ybiW COG1882 # Protein_GI_number: 16128791 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 1 810 1 810 810 1690 99.0 0 MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHLDKPIPVRRALALAHHL ANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFAVSEENKRVL HEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMTSGDAHLAVNFPLLLEKGLDG LREKVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSEHIERFAALAREMAATETRESRR DELLTMAENCDLIAHQPPQTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRD VELNQTLDREHAIEMLHSCWLKLLEVNKIRSGSHSKTSAGSPLYQNVTIGGQNLVDGQPM DAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVI PEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLAALEGGRDATSSK VFLPQEKALSAGNFNNFDEVMDAWDTQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVD DCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFD GLTHEQLRQRLINGAPKYGNDDDTVDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAG TSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGG VLLNQKLNPATLENESDKQKLMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDL VVRVAGYSAFFTALSPDAQDDIIARTEHML >gi|299857053|gb|ADWS01000011.1| GENE 132 138512 - 139327 878 271 aa, chain + ## HITS:1 COG:ECs0899 KEGG:ns NR:ns ## COG: ECs0899 COG0561 # Protein_GI_number: 15830153 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 271 1 271 271 541 99.0 1e-154 MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIEFVVASGNQYYQLISFFPELKD EISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPE AFVALMAKHYHRLKAVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHIALDGIMKPVTSGF GFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIK QIARYATDDNNHEGALNVIQAVLDNTSPFNS >gi|299857053|gb|ADWS01000011.1| GENE 133 139479 - 140399 819 306 aa, chain + ## HITS:1 COG:no KEGG:B21_00805 NR:ns ## KEGG: B21_00805 # Name: ybiU # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 305 1 305 421 632 100.0 1e-180 MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIATRVAEINALKAQGDAV WPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYK GPGDNFFGTLSASRPEIYPIYWSQAQMQARQSEEMANAQSFLNRLWTFESDGKQWFNPDV SVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNLAQYDPWHAAHR TEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRPLLDDVPED ELCGVV >gi|299857053|gb|ADWS01000011.1| GENE 134 140403 - 140609 125 68 aa, chain - ## HITS:1 COG:Z5089 KEGG:ns NR:ns ## COG: Z5089 COG2801 # Protein_GI_number: 15804202 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 68 158 225 225 132 91.0 1e-31 MERFFRSLKTEWVPTNGYAGKDEARQQINDYILNYYNSVRPHHYNGGLTPEESENRYHFY CKTVANIT Prediction of potential genes in microbial genomes Time: Sun May 15 22:10:12 2011 Seq name: gi|299857052|gb|ADWS01000012.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont11.1, whole genome shotgun sequence Length of sequence - 120412 bp Number of predicted genes - 111, with homology - 111 Number of transcription units - 61, operones - 21 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 371 124 ## COG3209 Rhs family protein - Prom 493 - 552 9.0 - Term 550 - 592 8.3 2 2 Tu 1 . - CDS 614 - 820 255 ## ECO103_0695 hypothetical protein - Prom 991 - 1050 9.8 + Prom 859 - 918 5.2 3 3 Op 1 . + CDS 1019 - 1222 85 ## EcE24377A_0725 K+-transporting ATPase, F subunit (EC:3.6.3.12) 4 3 Op 2 20/0.000 + CDS 1222 - 2895 1785 ## COG2060 K+-transporting ATPase, A chain 5 3 Op 3 18/0.000 + CDS 2918 - 4966 2440 ## COG2216 High-affinity K+ transport system, ATPase chain B 6 3 Op 4 15/0.000 + CDS 4975 - 5547 493 ## COG2156 K+-transporting ATPase, c chain 7 3 Op 5 16/0.000 + CDS 5540 - 8224 2313 ## COG2205 Osmosensitive K+ channel histidine kinase 8 3 Op 6 2/0.826 + CDS 8296 - 8898 627 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 8942 - 8992 14.0 + Prom 9331 - 9390 5.8 9 4 Op 1 10/0.000 + CDS 9588 - 11786 2065 ## COG1982 Arginine/lysine/ornithine decarboxylases 10 4 Op 2 . + CDS 11783 - 13102 1358 ## COG0531 Amino acid transporters + Term 13112 - 13157 -0.4 - Term 13101 - 13147 9.5 11 5 Op 1 6/0.130 - CDS 13158 - 14798 1935 ## COG0033 Phosphoglucomutase 12 5 Op 2 . - CDS 14824 - 15369 401 ## COG3057 Negative regulator of replication initiationR - Prom 15506 - 15565 4.4 + Prom 15462 - 15521 2.4 13 6 Op 1 . + CDS 15554 - 16318 645 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 14 6 Op 2 . + CDS 16389 - 16751 396 ## LF82_2603 uncharacterized protein YbfE + Prom 16775 - 16834 2.9 15 7 Tu 1 . + CDS 16891 - 17421 767 ## COG0716 Flavodoxins + Term 17427 - 17466 9.1 + Prom 17580 - 17639 7.0 16 8 Tu 1 . + CDS 17710 - 18156 460 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 18176 - 18205 2.1 - Term 18208 - 18239 0.1 17 9 Op 1 . - CDS 18240 - 18566 370 ## ECIAI39_0639 putative lipoprotein 18 9 Op 2 . - CDS 18616 - 20022 1521 ## G2583_0842 outer membrane porin, OprD family - Term 20370 - 20398 3.0 19 10 Tu 1 . - CDS 20468 - 22132 2016 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 22215 - 22274 7.7 + Prom 22164 - 22223 3.6 20 11 Tu 1 . + CDS 22243 - 22365 68 ## ECH74115_0771 hypothetical protein - Term 22246 - 22289 5.0 21 12 Tu 1 . - CDS 22335 - 24281 2049 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Prom 24315 - 24374 5.4 22 13 Op 1 12/0.000 + CDS 24614 - 25414 935 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 25425 - 25462 2.1 23 13 Op 2 7/0.043 + CDS 25473 - 26621 1283 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 24 13 Op 3 5/0.261 + CDS 26630 - 27850 261 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 25 13 Op 4 5/0.261 + CDS 27898 - 28650 772 ## COG0647 Predicted sugar phosphatases of the HAD superfamily + Term 28654 - 28690 4.9 + Prom 28757 - 28816 8.9 26 14 Tu 1 . + CDS 28907 - 30571 1949 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) + Term 30579 - 30623 12.5 + TRNA 30952 - 31028 96.2 # Met CAT 0 0 + TRNA 31037 - 31121 78.3 # Leu TAG 0 0 + TRNA 31145 - 31219 74.3 # Gln TTG 0 0 + TRNA 31254 - 31328 74.3 # Gln TTG 0 0 + TRNA 31344 - 31420 96.2 # Met CAT 0 0 + TRNA 31469 - 31543 75.8 # Gln CTG 0 0 + TRNA 31581 - 31655 75.8 # Gln CTG 0 0 - Term 31653 - 31681 1.0 27 15 Tu 1 . - CDS 31809 - 32984 1192 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Prom 33035 - 33094 3.1 + Prom 32959 - 33018 2.1 28 16 Op 1 10/0.000 + CDS 33130 - 34554 435 ## PROTEIN SUPPORTED gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase + Term 34561 - 34593 4.5 + Prom 34597 - 34656 2.2 29 16 Op 2 17/0.000 + CDS 34707 - 35747 1319 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 30 16 Op 3 11/0.000 + CDS 35744 - 36211 723 ## COG0319 Predicted metal-dependent hydrolase + Term 36242 - 36277 2.4 31 16 Op 4 9/0.000 + CDS 36301 - 37179 917 ## COG4535 Putative Mg2+ and Co2+ transporter CorC 32 16 Op 5 . + CDS 37204 - 38742 1792 ## COG0815 Apolipoprotein N-acyltransferase + Term 38793 - 38827 5.1 33 17 Tu 1 . - CDS 38820 - 40697 752 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) - Prom 40790 - 40849 5.3 + Prom 41020 - 41079 4.0 34 18 Op 1 31/0.000 + CDS 41152 - 42060 1145 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 42183 - 42222 9.1 + Prom 42190 - 42249 2.6 35 18 Op 2 17/0.000 + CDS 42331 - 42969 632 ## COG0765 ABC-type amino acid transport system, permease component 36 18 Op 3 34/0.000 + CDS 42969 - 43643 699 ## COG0765 ABC-type amino acid transport system, permease component 37 18 Op 4 4/0.565 + CDS 43643 - 44368 552 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 38 19 Tu 1 3/0.609 + CDS 44486 - 45421 930 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Term 45433 - 45483 8.0 + Prom 45426 - 45485 2.3 39 20 Tu 1 . + CDS 45505 - 47175 1357 ## COG0443 Molecular chaperone + Term 47274 - 47329 -0.7 - Term 47190 - 47223 -1.0 40 21 Op 1 . - CDS 47235 - 48686 997 ## S0654 hypothetical protein 41 21 Op 2 . - CDS 48683 - 49390 506 ## EC55989_0640 hypothetical protein - Prom 49474 - 49533 10.2 + Prom 49399 - 49458 9.9 42 22 Tu 1 . + CDS 49507 - 50046 270 ## COG0790 FOG: TPR repeat, SEL1 subfamily 43 23 Op 1 . - CDS 50056 - 51483 676 ## EcSMS35_0667 DnaJ domain-containing protein 44 23 Op 2 . - CDS 51480 - 52187 301 ## ECIAI1_0629 hypothetical protein - Prom 52260 - 52319 7.4 + Prom 52202 - 52261 4.9 45 24 Tu 1 . + CDS 52351 - 53328 791 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Term 53341 - 53376 4.3 - Term 53210 - 53250 8.1 46 25 Tu 1 . - CDS 53398 - 53880 476 ## APECO1_1413 hypothetical protein - Prom 53962 - 54021 3.1 + Prom 53862 - 53921 3.9 47 26 Op 1 9/0.000 + CDS 53974 - 56697 3193 ## COG0495 Leucyl-tRNA synthetase 48 26 Op 2 12/0.000 + CDS 56808 - 57293 565 ## COG2980 Rare lipoprotein B 49 26 Op 3 7/0.043 + CDS 57293 - 58324 821 ## COG1466 DNA polymerase III, delta subunit 50 26 Op 4 3/0.609 + CDS 58326 - 58967 461 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 51 26 Op 5 6/0.130 + CDS 58991 - 59602 372 ## COG0406 Fructose-2,6-bisphosphatase + Prom 59767 - 59826 4.7 52 27 Op 1 14/0.000 + CDS 59862 - 60179 285 ## COG0799 Uncharacterized homolog of plant Iojap protein 53 27 Op 2 9/0.000 + CDS 60183 - 60650 496 ## COG1576 Uncharacterized conserved protein 54 27 Op 3 19/0.000 + CDS 60681 - 62582 1990 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 55 27 Op 4 8/0.000 + CDS 62641 - 63696 940 ## COG0772 Bacterial cell division membrane protein 56 27 Op 5 12/0.000 + CDS 63707 - 64795 902 ## COG0797 Lipoproteins + Term 64875 - 64909 1.3 + Prom 64838 - 64897 5.0 57 27 Op 6 9/0.000 + CDS 64935 - 66146 1284 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 66205 - 66236 4.8 + Prom 66150 - 66209 2.3 58 27 Op 7 6/0.130 + CDS 66257 - 66520 335 ## COG2921 Uncharacterized conserved protein + Prom 66529 - 66588 3.9 59 28 Tu 1 . + CDS 66621 - 67262 538 ## COG0321 Lipoate-protein ligase B + Term 67276 - 67309 -0.3 + Prom 67295 - 67354 5.4 60 29 Tu 1 . + CDS 67521 - 68474 612 ## COG0583 Transcriptional regulator + Prom 68538 - 68597 4.7 61 30 Tu 1 . + CDS 68683 - 69648 890 ## COG0320 Lipoate synthase + Term 69685 - 69714 2.1 - Term 69673 - 69702 2.1 62 31 Tu 1 . - CDS 69749 - 69958 178 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 - Prom 69999 - 70058 3.7 63 32 Tu 1 . - CDS 70081 - 70869 762 ## COG0388 Predicted amidohydrolase - Prom 70947 - 71006 2.7 + Prom 70844 - 70903 5.2 64 33 Tu 1 . + CDS 70962 - 71345 154 ## COG0239 Integral membrane protein possibly involved in chromosome condensation + Term 71359 - 71387 0.6 - Term 71345 - 71375 1.0 65 34 Op 1 . - CDS 71399 - 71608 330 ## COG1278 Cold shock proteins - Prom 71722 - 71781 6.5 - Term 71622 - 71650 -0.0 66 34 Op 2 . - CDS 71783 - 72343 464 ## B21_00581 hypothetical protein - Prom 72576 - 72635 8.9 + Prom 72849 - 72908 7.3 67 35 Tu 1 . + CDS 72932 - 74317 1419 ## COG3069 C4-dicarboxylate transporter + Term 74326 - 74360 5.2 - Term 74308 - 74352 5.1 68 36 Op 1 9/0.000 - CDS 74358 - 75038 263 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 69 36 Op 2 . - CDS 75007 - 76665 1414 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism - Prom 76717 - 76776 5.3 + Prom 76829 - 76888 7.4 70 37 Op 1 5/0.261 + CDS 77045 - 78103 868 ## COG3053 Citrate lyase synthetase 71 37 Op 2 6/0.130 + CDS 78118 - 78414 276 ## COG3052 Citrate lyase, gamma subunit 72 37 Op 3 6/0.130 + CDS 78411 - 79319 1150 ## COG2301 Citrate lyase beta subunit 73 37 Op 4 7/0.043 + CDS 79330 - 80862 1663 ## COG3051 Citrate lyase, alpha subunit 74 37 Op 5 5/0.261 + CDS 80866 - 81417 330 ## COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) 75 37 Op 6 5/0.261 + CDS 81392 - 82270 630 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase 76 37 Op 7 4/0.565 + CDS 82321 - 83784 1615 ## COG0471 Di- and tricarboxylate transporters + Term 83816 - 83857 10.1 + Prom 83801 - 83860 2.6 77 38 Tu 1 4/0.565 + CDS 83880 - 84704 472 ## COG3719 Ribonuclease I + Term 84854 - 84888 5.0 + Prom 84788 - 84847 3.7 78 39 Tu 1 . + CDS 84934 - 85344 367 ## COG0782 Transcription elongation factor + Term 85381 - 85408 0.1 79 40 Tu 1 . - CDS 85575 - 86813 866 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 86838 - 86897 2.0 80 41 Tu 1 . - CDS 86932 - 87138 81 ## EcE24377A_0629 hypothetical protein + Prom 86939 - 86998 3.3 81 42 Tu 1 . + CDS 87034 - 87462 496 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 87482 - 87523 7.1 - Term 87517 - 87552 5.5 82 43 Tu 1 . - CDS 87583 - 89148 411 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Prom 88936 - 88995 2.2 83 44 Tu 1 . + CDS 89147 - 89338 101 ## gi|188495373|ref|ZP_03002643.1| hypothetical protein Ec53638_0709 - Term 89224 - 89255 4.1 84 45 Tu 1 . - CDS 89277 - 89840 639 ## COG0450 Peroxiredoxin - Prom 89904 - 89963 3.9 85 46 Tu 1 . + CDS 90212 - 90958 664 ## COG1651 Protein-disulfide isomerase + Prom 91040 - 91099 7.6 86 47 Tu 1 . + CDS 91166 - 92068 495 ## COG0583 Transcriptional regulator + Prom 92111 - 92170 6.4 87 48 Op 1 8/0.000 + CDS 92215 - 93435 649 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase 88 48 Op 2 . + CDS 93420 - 94037 514 ## COG1475 Predicted transcriptional regulators + Term 94052 - 94091 0.6 - Term 93963 - 94010 5.0 89 49 Tu 1 . - CDS 94038 - 95198 963 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 95228 - 95287 5.2 + Prom 95202 - 95261 3.6 90 50 Tu 1 . + CDS 95307 - 96395 1121 ## COG0371 Glycerol dehydrogenase and related enzymes + Term 96480 - 96520 -0.4 91 51 Op 1 9/0.000 - CDS 96405 - 96602 256 ## COG2879 Uncharacterized small protein - Prom 96665 - 96724 3.9 - Term 96623 - 96665 3.5 92 51 Op 2 4/0.565 - CDS 96784 - 98889 2579 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 98927 - 98986 3.6 - Term 98968 - 99028 0.3 93 52 Op 1 5/0.261 - CDS 99070 - 99483 393 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 94 52 Op 2 5/0.261 - CDS 99486 - 100232 963 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 95 52 Op 3 5/0.261 - CDS 100232 - 101089 1090 ## COG1535 Isochorismate hydrolase 96 52 Op 4 6/0.130 - CDS 101103 - 102713 1632 ## COG1021 Peptide arylation enzymes 97 52 Op 5 . - CDS 102723 - 103898 1140 ## COG1169 Isochorismate synthase - Prom 103953 - 104012 6.3 + Prom 104194 - 104253 2.2 98 53 Tu 1 . + CDS 104273 - 105229 1002 ## COG4592 ABC-type Fe2+-enterobactin transport system, periplasmic component - Term 104924 - 104988 1.7 99 54 Tu 1 . - CDS 105233 - 106483 1152 ## COG0477 Permeases of the major facilitator superfamily - Prom 106526 - 106585 3.9 + Prom 106470 - 106529 4.5 100 55 Op 1 8/0.000 + CDS 106582 - 107598 1324 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 101 55 Op 2 7/0.043 + CDS 107595 - 108587 932 ## COG4779 ABC-type enterobactin transport system, permease component 102 55 Op 3 . + CDS 108584 - 109399 197 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 103 56 Tu 1 . - CDS 109396 - 110529 948 ## COG3765 Chain length determinant protein - Prom 110685 - 110744 8.5 104 57 Op 1 2/0.826 - CDS 110746 - 114627 3545 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 105 57 Op 2 2/0.826 - CDS 114624 - 114842 273 ## COG3251 Uncharacterized protein conserved in bacteria 106 57 Op 3 . - CDS 114845 - 116047 766 ## COG2382 Enterochelin esterase and related enzymes - Prom 116094 - 116153 4.8 + Prom 116055 - 116114 4.5 107 58 Tu 1 . + CDS 116290 - 118530 2613 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 118643 - 118680 2.2 + Prom 118586 - 118645 9.7 108 59 Tu 1 . + CDS 118696 - 119325 396 ## COG2977 Phosphopantetheinyl transferase component of siderophore synthetase - Term 119402 - 119446 3.2 109 60 Tu 1 . - CDS 119447 - 119599 126 ## EFER_2525 putative small toxic membrane polypeptide, putative HokE-like protein (partial) - Prom 119764 - 119823 4.9 - Term 119905 - 119949 3.2 110 61 Op 1 . - CDS 119950 - 120102 139 ## EcHS_A0629 Hok/Gef family protein - Term 120116 - 120169 -0.3 111 61 Op 2 . - CDS 120201 - 120389 103 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|299857052|gb|ADWS01000012.1| GENE 1 2 - 371 124 123 aa, chain - ## HITS:1 COG:ZrhsA KEGG:ns NR:ns ## COG: ZrhsA COG3209 # Protein_GI_number: 15804134 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 EDL933 # 1 123 1 123 1377 253 99.0 5e-68 MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPG ETDIALPAPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRS LYF >gi|299857052|gb|ADWS01000012.1| GENE 2 614 - 820 255 68 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0695 NR:ns ## KEGG: ECO103_0695 # Name: ybfA # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 68 1 68 68 117 100.0 1e-25 MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLHRVWSKTSDKPVWMDQA EKATGDFY >gi|299857052|gb|ADWS01000012.1| GENE 3 1019 - 1222 85 67 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_0725 NR:ns ## KEGG: EcE24377A_0725 # Name: kdpF # Def: K+-transporting ATPase, F subunit (EC:3.6.3.12) # Organism: E.coli_E24377A # Pathway: Two-component system [PATH:ecw02020] # 1 67 1 67 67 93 100.0 2e-18 MAFAIFILFLHPARRFLRNLCSQNSTLPVSLLGHWRCTVSAGVITGVLLVFLLLGYLVYA LINAEAF >gi|299857052|gb|ADWS01000012.1| GENE 4 1222 - 2895 1785 557 aa, chain + ## HITS:1 COG:kdpA KEGG:ns NR:ns ## COG: kdpA COG2060 # Protein_GI_number: 16128674 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Escherichia coli K12 # 1 557 1 557 557 977 99.0 0 MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTTGVERVLFRALGVSDREMNWK QYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLALNTAVSFVTNTNWQSYSG ETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSMSTLGNAWVDLLRITLWVLVP VALLIALFFIQQGALQNFQPYQAVNTVEGAQQLLPMGPVASQEAIKMLGTNGGGFFNANS SHPFENPTALTNFVQMLAIFLIPTALCFAFSEVTGDRRQGRMLLWAMSVIFVICVGVVMW AEVQGNPHLLALGADSSINMEGKESRFGVLVSSLFAVVTTAASCGAVIAMHDSFTALGGM VPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALA ILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPF WNCLLAFCMFVGRFGVIIPVMAIAGSLVSKKSQPASSGTLPTHGPLFVGLLIGTVLLVGA LTFIPALALGPVAEYLS >gi|299857052|gb|ADWS01000012.1| GENE 5 2918 - 4966 2440 682 aa, chain + ## HITS:1 COG:ECs0725 KEGG:ns NR:ns ## COG: ECs0725 COG2216 # Protein_GI_number: 15829979 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Escherichia coli O157:H7 # 1 682 1 682 682 1247 99.0 0 MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSLLTTCISIAMASGAMPG NALFSAAISGWLWVTVLFANFAEALAEGRSKAQANSLKGVKKTAFARKLREPKYGAAADK VPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITGESAPVIRESGGDFASVTGGT RILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLW PFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGD VDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRF NLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKV DQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRQMGIKTVMITGDNRLTAAA IAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQ AAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYP QLNALNIMRLHSPDSAILSAVIFNALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLG GLLVPFIGIKVIDLLLTVCGLV >gi|299857052|gb|ADWS01000012.1| GENE 6 4975 - 5547 493 190 aa, chain + ## HITS:1 COG:kdpC KEGG:ns NR:ns ## COG: kdpC COG2156 # Protein_GI_number: 16128672 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Escherichia coli K12 # 1 190 1 190 190 327 96.0 1e-89 MRGLRPALSTFIFLLLITGGVYPLLTTVLGQWWFPWQANGSLIREGDTVRGSALIGQNFT GNGYFQGRPSATAEMPYNPQASGGSNLAVSNPELDKQIAARVAALRAANPDASTNVPVEL VTASASGLDNNITPQAAVWQIPRVAKARNLSVEQLTQLIAKYSQQPLVKYIGQPVVNIVE LNLALDKLDE >gi|299857052|gb|ADWS01000012.1| GENE 7 5540 - 8224 2313 894 aa, chain + ## HITS:1 COG:ECs0723 KEGG:ns NR:ns ## COG: ECs0723 COG2205 # Protein_GI_number: 15829977 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Escherichia coli O157:H7 # 1 894 1 894 894 1762 99.0 0 MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAEAQRLRAQGLDIVVGVV ETHGRKDTAAMLEGLAVLPPKRQAYRGRHISEFDLDAALARRPALILMDELAHSNAPGSR HPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGIQVRETVPDPFFDAADDVVLV DLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIALRELALRRTADRVDEQMRAWRGH PGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASRLGSVWHAVYVETPALHRLPEKKRR AILSALRLAQELGAETATLSDPAEEKAVVRYAREHNLGKIILGRPASRRWWRRETFADRL ARIAPDLDQVLVALDEPPARTINNAPDSRSFKDKWRVQIQGCVVAAALCAVITLIAMQWL MAFDAANLVMLYLLGVVVVALFYGRWPSVVATVINVVSFDLFFIAPRGTLAVSDVQYLLT FAVMLTVGLVIGNLTAGVRYQARVARYREQRTRHLYEMSKALAVGRSPQDIAATSEQFIA STFHARSQVLLPDDNGKLQPLTHPQGMTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQIL PLKSGEKTYGLVVVEPGNLRQLMIPEQQRLLETFTLLVANAFERLTLTASEEQARMASER EQIRNALLAALSHDLRTPLTVLFGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNN LLDMARIQSGGFNLKKEWLTLEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFER VLINLLENAVKYAGAQAEIGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKES AVPGVGLGLAICRAIVDVHGGTITAFNRPEGGACFRVTLPQQTAPELEDFHEDM >gi|299857052|gb|ADWS01000012.1| GENE 8 8296 - 8898 627 200 aa, chain + ## HITS:1 COG:ECs0722 KEGG:ns NR:ns ## COG: ECs0722 COG0745 # Protein_GI_number: 15829976 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 199 26 224 225 385 99.0 1e-107 MRVYEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEES DKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHR GEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQ DPARPRHFITETGIGYRFMP >gi|299857052|gb|ADWS01000012.1| GENE 9 9588 - 11786 2065 732 aa, chain + ## HITS:1 COG:ECs0721 KEGG:ns NR:ns ## COG: ECs0721 COG1982 # Protein_GI_number: 15829975 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 732 1 732 732 1538 99.0 0 MSELKIAVSRSCPDCFSTHRACVNIDESNYIDVAAIILSVSDVERGKLDEIDATGYDIPV FIATENEERVPAEYLPRISGVFEHCESRKEFYGRQLETAASHYETQLRPPFFRALVDYVN QGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEMLFRSDLCNADVAMGDLLIHEGAPCIAQ QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV YLETARNPYGFIGGIDAHCFEESYLRELITEVAPQRAKEARPFRLAVIQLGTYDGTIYNA RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGF SQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPFYPLFAALDINAKMHEGVSGRNM WMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEHWHS FEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNSIL FLLTPAEDMAKLQQLVALLVRFEKLLESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMH DLYARHNVKQLQKEMFRKEHFPRVSMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPY PPGVLCVVPGEIWGGAVLRYFSALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPR DAQSTLLKGEKL >gi|299857052|gb|ADWS01000012.1| GENE 10 11783 - 13102 1358 439 aa, chain + ## HITS:1 COG:potE KEGG:ns NR:ns ## COG: potE COG0531 # Protein_GI_number: 16128668 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 439 1 439 439 770 100.0 0 MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIISWLVTAVGSMALAWAFA KCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELLGASLS PVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIPVVGLCIIGWFWFSPTLYVDS WNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVENPERNVPIAVLGGTLGAAVIYIV STNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKVIMALMVMSCCGSLLGWQFTIAQVF KSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQSGLALMTISPSLNSQFNVLVNLAVVTN IIPYILSMAALVIIQKVANVPPSKAKVANFVAFVGAMYSFYALYSSGEEAMLYGSIVTFL GWTLYGLVSPRFELKNKHG >gi|299857052|gb|ADWS01000012.1| GENE 11 13158 - 14798 1935 546 aa, chain - ## HITS:1 COG:pgm KEGG:ns NR:ns ## COG: pgm COG0033 # Protein_GI_number: 16128664 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Escherichia coli K12 # 1 546 1 546 546 1081 100.0 0 MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAARHSFNEPH ILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPT PAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDRANAL LADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADIVDMAAIQKAGLTLGVDPLGGSG IEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLA FANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQHRPQWGKDVAVGKTLVSSAMIDRVVN DLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAE ITAVTGKNPQEHYNELAKRFGAPSYNRLQAAATSAQKAALSKLSPEMVSASTLAGDPITA RLTAAPGNGASIGGLKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVEIVS EVLKNA >gi|299857052|gb|ADWS01000012.1| GENE 12 14824 - 15369 401 181 aa, chain - ## HITS:1 COG:seqA KEGG:ns NR:ns ## COG: seqA COG3057 # Protein_GI_number: 16128663 # Func_class: L Replication, recombination and repair # Function: Negative regulator of replication initiationR # Organism: Escherichia coli K12 # 1 181 1 181 181 344 100.0 5e-95 MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAPVTKEVRVASPAIVEAK PVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLDAQAFAEATESLHGRTRVY FAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCGT I >gi|299857052|gb|ADWS01000012.1| GENE 13 15554 - 16318 645 254 aa, chain + ## HITS:1 COG:ybfF KEGG:ns NR:ns ## COG: ybfF COG0596 # Protein_GI_number: 16128662 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 254 1 254 254 495 99.0 1e-140 MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDMRNHGLSPRDP VMNYPAMAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH VRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWD QYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEK PDAVLRAIRRYLND >gi|299857052|gb|ADWS01000012.1| GENE 14 16389 - 16751 396 120 aa, chain + ## HITS:1 COG:no KEGG:LF82_2603 NR:ns ## KEGG: LF82_2603 # Name: ybfE # Def: uncharacterized protein YbfE # Organism: E.coli_LF82 # Pathway: not_defined # 1 120 1 120 120 190 99.0 1e-47 MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRIN KRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV >gi|299857052|gb|ADWS01000012.1| GENE 15 16891 - 17421 767 176 aa, chain + ## HITS:1 COG:ECs0715 KEGG:ns NR:ns ## COG: ECs0715 COG0716 # Protein_GI_number: 15829969 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 348 100.0 3e-96 MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPTWYYG EAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHW PTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHLDEILNA >gi|299857052|gb|ADWS01000012.1| GENE 16 17710 - 18156 460 148 aa, chain + ## HITS:1 COG:ECs0714 KEGG:ns NR:ns ## COG: ECs0714 COG0735 # Protein_GI_number: 15829968 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Escherichia coli O157:H7 # 1 148 1 148 148 279 100.0 1e-75 MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLN QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGI RLTNHSLYLYGHCAEGDCREDEHAHEGK >gi|299857052|gb|ADWS01000012.1| GENE 17 18240 - 18566 370 108 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_0639 NR:ns ## KEGG: ECIAI39_0639 # Name: ybfN # Def: putative lipoprotein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 108 1 108 108 172 99.0 3e-42 MKKLILIAIMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKE KQHQQFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQEIRSNNK >gi|299857052|gb|ADWS01000012.1| GENE 18 18616 - 20022 1521 468 aa, chain - ## HITS:1 COG:no KEGG:G2583_0842 NR:ns ## KEGG: G2583_0842 # Name: ybfM # Def: outer membrane porin, OprD family # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 468 1 468 468 879 99.0 0 MRTFSGKRSTLALAIAGVTAMSGFIAMPEARAEGFIDDSTLTGGIYYWQRERDRKDVTDG DKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSSHPNEIAFSKSNKAY DEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANF DYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKVDYLHSLGAKYDFKNNFVLEAAF GQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRDKVDDRSVNDLYDGTAWLQALTFGY RAADVVDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFG AMYDLKNWNLPGFAIGASYVYAWDAKPATWQSNPDAYYDKNRTIEESAYSLDAVYTIQDG RAKGTMFKLHFTEYDNHSDIPSWGGGYGNIFQDERDVKFMVIAPFTIF >gi|299857052|gb|ADWS01000012.1| GENE 19 20468 - 22132 2016 554 aa, chain - ## HITS:1 COG:glnS KEGG:ns NR:ns ## COG: glnS COG0008 # Protein_GI_number: 16128656 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 554 1 554 554 1164 99.0 0 MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKG QCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLA YVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGDFEEGKACLRAKIDMA SPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRL YDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVADKHVEGWDDPRMPTISGLRRR GYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGE GEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA ERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVP NPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN RTVGLRDTWAKVGE >gi|299857052|gb|ADWS01000012.1| GENE 20 22243 - 22365 68 40 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_0771 NR:ns ## KEGG: ECH74115_0771 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 40 12 51 51 67 97.0 2e-10 MIDEKKSGKEDLHRLSLLDATLKRRIRHKADYFLISYSGV >gi|299857052|gb|ADWS01000012.1| GENE 21 22335 - 24281 2049 648 aa, chain - ## HITS:1 COG:ECs0709_1 KEGG:ns NR:ns ## COG: ECs0709_1 COG1263 # Protein_GI_number: 15829963 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 1 390 1 390 390 690 100.0 0 MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQAGGAIFDNLALIFAIGV ASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGIITGLVGGAAYNRWSDIKL PDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFI NRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYAGDGTAGMFMSGFFPIMMFG LPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTG ISLFVATLLGIHAGFSFSAGAIDYALMYNLPAASQNVWMLLVMGVVFFAIYFVVFSLVIR MFNLKTPGREDKEDEIVTEEANSNTEEGLNQLATNYIAAVGGTDNLKAIDACITRLRLTV ADSARVNDTMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAMKKVVARGPVAAASAEATP ATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVS PAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILE MDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHVVAGQTPLYEIKK >gi|299857052|gb|ADWS01000012.1| GENE 22 24614 - 25414 935 266 aa, chain + ## HITS:1 COG:ECs0708 KEGG:ns NR:ns ## COG: ECs0708 COG0363 # Protein_GI_number: 15829962 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 560 100.0 1e-159 MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQ VSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQ YEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQ VPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCD EPSTMELKVKTLRYFNELEAENIKGL >gi|299857052|gb|ADWS01000012.1| GENE 23 25473 - 26621 1283 382 aa, chain + ## HITS:1 COG:ECs0707 KEGG:ns NR:ns ## COG: ECs0707 COG1820 # Protein_GI_number: 15829961 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 767 99.0 0 MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLKGAILSPGFIDVQL NGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAK HPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEV ISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEAD IYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCV DENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANL TAFTPDFKITKTIVNGNEVVTQ >gi|299857052|gb|ADWS01000012.1| GENE 24 26630 - 27850 261 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 129 390 47 317 319 105 27 1e-21 MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQLAPASVTKITRQLIERG LIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITLFDLSSKVLAEEHYPLPER TQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVE ALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNG NVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDCTIKTI CKAANKGDSLASEVIEYVGRHLGKTIAIAINLFNPQKIVIAGEITEADKVLLPAIESCIN TQALKAFRTNLPVVRSELDHRSAIGAFALVKRAMLNGILLQHLLEN >gi|299857052|gb|ADWS01000012.1| GENE 25 27898 - 28650 772 250 aa, chain + ## HITS:1 COG:ECs0705 KEGG:ns NR:ns ## COG: ECs0705 COG0647 # Protein_GI_number: 15829959 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 517 100.0 1e-147 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAG VDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETR SYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPW IIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWI YPSVAEIDVI >gi|299857052|gb|ADWS01000012.1| GENE 26 28907 - 30571 1949 554 aa, chain + ## HITS:1 COG:ECs0704 KEGG:ns NR:ns ## COG: ECs0704 COG0367 # Protein_GI_number: 15829958 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Escherichia coli O157:H7 # 1 554 1 554 554 1146 99.0 0 MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGA QPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQG MFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSY LWSQDGEIRSYYHRDWFDFDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDS SIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHF TVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLY FHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQD KMCGNGKMEKHILRECFESYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLET ARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWDEAFKKMDD PSGRAVGVHQSAYK >gi|299857052|gb|ADWS01000012.1| GENE 27 31809 - 32984 1192 391 aa, chain - ## HITS:1 COG:ECs0700 KEGG:ns NR:ns ## COG: ECs0700 COG0654 # Protein_GI_number: 15829954 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 775 98.0 0 MTNQPTEIAIVGGGMVGGALALGLAQHGFSVTVIEHAEPAPFVADSQPDVRISAISAASV SLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVMFDAAELKLPLLGYMVENTVLQQALWQ ALEAHPKVTLRVPGSLIALHRDNDLQELELKGGEVIRAKLVIGADGANSQVRQMAGIGVH AWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPLFDNWASLVWYDSPVRIRQLQNM NMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHALQYVQPGLALVGDAAHTIHPLAGQG VNLGYRDVDALIDVLVNARSYGEAWASYPVLKRYQMRRMADNFIMQSGMDLFYAGFSNNL PPLRFVRNLGLMAAERAGVLKRQALKYALGL >gi|299857052|gb|ADWS01000012.1| GENE 28 33130 - 34554 435 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase [Veillonella parvula DSM 2008] # 1 390 1 389 449 172 29 9e-42 MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVF HQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRG YRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDD ILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSH PIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDI QISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQ RLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIG KFVDVEITDVYPNSLRGKVVRTEDEMGLRMAETPESVIARTRKENDLGVGYYQP >gi|299857052|gb|ADWS01000012.1| GENE 29 34707 - 35747 1319 346 aa, chain + ## HITS:1 COG:ECs0698 KEGG:ns NR:ns ## COG: ECs0698 COG1702 # Protein_GI_number: 15829952 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Escherichia coli O157:H7 # 1 346 14 359 359 644 99.0 0 MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAA DILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESVPEYGKAVNIKTKRGVIKP RTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK LGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFN FFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK >gi|299857052|gb|ADWS01000012.1| GENE 30 35744 - 36211 723 155 aa, chain + ## HITS:1 COG:ybeY KEGG:ns NR:ns ## COG: ybeY COG0319 # Protein_GI_number: 16128642 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 155 1 155 155 271 100.0 2e-73 MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIRVVDTAESHSLNLTYRG KDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLL GYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE >gi|299857052|gb|ADWS01000012.1| GENE 31 36301 - 37179 917 292 aa, chain + ## HITS:1 COG:ECs0696 KEGG:ns NR:ns ## COG: ECs0696 COG4535 # Protein_GI_number: 15829950 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 508 100.0 1e-144 MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDSGQNDLIDEDTRDMLEG VMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAK DLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVT IEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIG GLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVKIPDDSPQPKLDE >gi|299857052|gb|ADWS01000012.1| GENE 32 37204 - 38742 1792 512 aa, chain + ## HITS:1 COG:lnt KEGG:ns NR:ns ## COG: lnt COG0815 # Protein_GI_number: 16128640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Escherichia coli K12 # 1 512 1 512 512 983 98.0 0 MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGLQALTFNRRPLQSAAIG FCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTT WLRVAIAAPSLWQVTEFLRGWVLTGFPWLQFGYSQIDGPLKGLAPIMGVEAINFLLMMVS GLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQPEKTIQVSMVQGDIPQSLKWDGD QLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLKALDGELRDKGSSLVTGIV DARLNKQNRYDTYNTIITLGKGAPYSYESADRYNKNHLVPFGEFVPLESILRPLAPFFDL PMSSFSRGPYIQPPLSVNGIELTAAICYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSI GPWQHFQMARMRALELARPLLRSTNNGITAVIGPQGEVQAMIPQFTREVLTTNVTPTTGL TPYARTGNWPLWVLTALFGFAAVLMSLRARKR >gi|299857052|gb|ADWS01000012.1| GENE 33 38820 - 40697 752 625 aa, chain - ## HITS:1 COG:RSp1525 KEGG:ns NR:ns ## COG: RSp1525 COG0705 # Protein_GI_number: 17549744 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Ralstonia solanacearum # 45 198 237 387 569 100 39.0 7e-21 MSASSVKPLNVQLPAITLILFALCVGIFCYFAQWMSYEEVDQSALIHLGANVASLTLSGE SWRLLSSVFLHSSVSHLLMNMFALLVVGGVVERILGKWRLLIVWLFSGVFGGLISACYAL RESEQIVISVGASGAIMGIAGAAIATQLASGAGTHHKNQRRVFPLLGMVALTLLYGARQT GIDNACHIGGLIAGGALGWLSACLSGQNRLVTEGGIIVAGSLLLTGAIWLAQQQMDESVL QVRQSLREAFYPQEIEQERRQKKQQLAEERNALRETLSAPVSREQASGDLLAEIADIHDM AISRDGNTLYAAIENTNSIVVFDLGQKKILHTFTAPIAKEKSVKHCGGCKDQGVRSLALS PDEKLIYATSFEANALSVINVATGEIIQSITTGAHPDSLILSRDGTKAWVMNRTSNSVSA IDLVTYQHVADIPLEKYDGTGTSNKPGAWVMALSPDEKILLIPGMVRGDIVRINTITHQK ESYPASDARGTISAMRFRPENGDVIFADSQGITRISVGDQQASIMTQWCSRSVYSVEGIS PDGQYLALVSYGLQGYVILLNINAGQIIGVYPASYVNHLRFSADGRKIFVMAKNGLIQLD RTRSLDPQAIIRHPQYGNVACIPEP >gi|299857052|gb|ADWS01000012.1| GENE 34 41152 - 42060 1145 302 aa, chain + ## HITS:1 COG:STM0665 KEGG:ns NR:ns ## COG: STM0665 COG0834 # Protein_GI_number: 16764042 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 302 7 308 308 547 93.0 1e-156 MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQ KVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVER QKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKDKAVVVTSGTTSEVLLNKLNEEQKMNMR IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRK DDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDEMKALFKEPNDKA LN >gi|299857052|gb|ADWS01000012.1| GENE 35 42331 - 42969 632 212 aa, chain + ## HITS:1 COG:gltJ KEGG:ns NR:ns ## COG: gltJ COG0765 # Protein_GI_number: 16128637 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 212 35 246 246 399 99.0 1e-111 MSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPE KIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQ AYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTA ITLAYVLINAFIMLVMTLVERKVRLPGNMGGK >gi|299857052|gb|ADWS01000012.1| GENE 36 42969 - 43643 699 224 aa, chain + ## HITS:1 COG:ECs0692 KEGG:ns NR:ns ## COG: ECs0692 COG0765 # Protein_GI_number: 15829946 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 224 1 224 224 370 100.0 1e-102 MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYV NVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGI QSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADF FRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA >gi|299857052|gb|ADWS01000012.1| GENE 37 43643 - 44368 552 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 217 45 2e-55 MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITV DGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKL LERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMV ELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKIL H >gi|299857052|gb|ADWS01000012.1| GENE 38 44486 - 45421 930 311 aa, chain + ## HITS:1 COG:ECs0690 KEGG:ns NR:ns ## COG: ECs0690 COG1957 # Protein_GI_number: 15829944 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 622 99.0 1e-178 MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTD IPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPAFAPQNCTAVELMAKTLRESAEPVT IVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQS GIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLH DPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGFV DLLADRLKFYA >gi|299857052|gb|ADWS01000012.1| GENE 39 45505 - 47175 1357 556 aa, chain + ## HITS:1 COG:ybeW KEGG:ns NR:ns ## COG: ybeW COG0443 # Protein_GI_number: 16128633 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli K12 # 1 556 1 556 556 1098 98.0 0 MDNAELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIISMDENNHILVGKPAVSR RTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSLKEDAEEFLQRPIKDVVIS VPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGLHTQQNTRSLVFDLGGGTFDV TVLEYATPVIEVHASAGDNFLGGEDFTHMLVDEVLKRADVTRTTLNESELAALYACVEAA KCSNQSPMHIRWQYQDETRECEFYENKLEDLWLPLLNRLRVPIEQALRDARLKPSQIDSL VLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIVALGAAIQAACRLRSEDIEEVILTDIC PYSLGVEVNRQGISGIFSPIIERNTTVPVSRVETYSTMHPEQDSITVNVYQGENHKVKNN ILVESFDVPLKKTGAYQSIDIRFSYDINGLLEVDVLLEDGSIKSRVINHSPVTLSAQQIE ESRTRLSALKIYPRDMLINRTFKAKLEELWARALGDEREEIGRVITDFDAALQSNDMARV DEVRRRASDYLAIEIP >gi|299857052|gb|ADWS01000012.1| GENE 40 47235 - 48686 997 483 aa, chain - ## HITS:1 COG:no KEGG:S0654 NR:ns ## KEGG: S0654 # Name: ybeV # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 483 1 483 483 937 98.0 0 MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQAYEEALRLAVNPVEEA DDEEKDAAAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNTWNMEDVDQLRWPLCAIAI EARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAIQAGDCFDFLSLLEYPVALQN QTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDAKLHRKLLRWYSSVQTGMAELIPVA KQWQAEEPESEDARYYQCAQRLYCGEGESLLADLGAYWESYPSTQADNLLLQWSKRHCPD YFALLVMVIEAQSMVDAQGQPLKYVPGESARTRLLWAEILHSGKLSPLGQSFIESLFFKR KAWAWWKSRVGSETEEDSPLLDLYRVAEQVVLEAFPKQEMLARLNTRLEGGDAHPLEAIV TRMLLTKVKLEPEDEDVDEPTPENHEEKNDEDEKPQSITSIIKISLTVLVIGYALGKIAM LFS >gi|299857052|gb|ADWS01000012.1| GENE 41 48683 - 49390 506 235 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0640 NR:ns ## KEGG: EC55989_0640 # Name: ybeU # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 235 1 235 235 478 100.0 1e-134 MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFDLSSSWGINNRDDLIQTIYQM TDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFVAQTAMCCGEGGIKAWDYV RMGFLSRVGVLNNWLTEEESLWLQSRVYVRAHHYYHSWMHYFSAYSLGRLYWQSSQCEDN TSLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQPLTVQPECPVTLKDVSDL >gi|299857052|gb|ADWS01000012.1| GENE 42 49507 - 50046 270 179 aa, chain + ## HITS:1 COG:ECs0685 KEGG:ns NR:ns ## COG: ECs0685 COG0790 # Protein_GI_number: 15829939 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli O157:H7 # 1 179 6 184 184 341 98.0 3e-94 MYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLRSPGSLPFTTAATELSAIHGHSTS QYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAIL WYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLAAKQHYKNAERLLAGLPAH >gi|299857052|gb|ADWS01000012.1| GENE 43 50056 - 51483 676 475 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_0667 NR:ns ## KEGG: EcSMS35_0667 # Name: not_defined # Def: DnaJ domain-containing protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 475 1 475 475 907 97.0 0 MKNCWKILEIEETTDVDIIRRAYLALLPSFHPETDPQGFKQLRQAYEKALRIAQSPAKSV WQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNYCSMEDIDELRWSLCTIAM NTAHLSFECVVLLAERLRWLQEENVGEIDEEELESFLYAIAKGNVFNFQTILHLPVAVQN DTIDFYQMFARIWSSHPEWLTLYLAQHRAVIIPDDAKLHRNLLRWYSAGRLGIPELLDYA RSWREAEPDNEDARYYEYAQRVYCGEGESLLAELCDYWREYPSTQADALILQWCRQHRVD YYPLVVMMIEARELVNDQGKQLLYVPGDSARTRFHLYEILSDEKLSALGRSLVEMVLHKG RKPRISLTRDTEHPLWPLYLVAKQLVQASQPTEESLMPIVSRLDAEDRCPLEALIIRRLL IQAANFTEKQTVEPEPQPQPMPVDDGGPGCLGIIKIIFYIFIFAGLIGKILHLFG >gi|299857052|gb|ADWS01000012.1| GENE 44 51480 - 52187 301 235 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0629 NR:ns ## KEGG: ECIAI1_0629 # Name: ybeR # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 235 1 235 235 464 98.0 1e-130 MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDARDDLLRTIHRI IDNGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYV RMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYRNWRQYFAGYTFGRQYWQSPEDDNL QLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLADYPTCPETLKDMSDL >gi|299857052|gb|ADWS01000012.1| GENE 45 52351 - 53328 791 325 aa, chain + ## HITS:1 COG:ybeQ KEGG:ns NR:ns ## COG: ybeQ COG0790 # Protein_GI_number: 16128627 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli K12 # 1 325 3 327 327 589 98.0 1e-168 MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQG HCEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAV VWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYED GKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGKPVDLRQAL DLYRKVQSSGTRDVSQEIREIEDLL >gi|299857052|gb|ADWS01000012.1| GENE 46 53398 - 53880 476 160 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1413 NR:ns ## KEGG: APECO1_1413 # Name: ybeL # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 160 1 160 160 305 100.0 2e-82 MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLE EFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVV GLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP >gi|299857052|gb|ADWS01000012.1| GENE 47 53974 - 56697 3193 907 aa, chain + ## HITS:1 COG:leuS KEGG:ns NR:ns ## COG: leuS COG0495 # Protein_GI_number: 16128625 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Escherichia coli K12 # 48 907 1 860 860 1793 99.0 0 MNNPGIISTSSARKAVLTRTFGLCYADLKNHLNATFVAVLKTGPLAAMQEQYRPEEIESK VQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNV LQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYY RWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFI KITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTF MGCTYLAVAAGHPLAQKAAENNPELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPL TGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQ ALTEKGVLFNSGEFNGLDHEAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIP MVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTF MESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGM VNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELV YTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRV WKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELM NKLAKAPTDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEK AMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGK LLNLVVG >gi|299857052|gb|ADWS01000012.1| GENE 48 56808 - 57293 565 161 aa, chain + ## HITS:1 COG:rlpB KEGG:ns NR:ns ## COG: rlpB COG2980 # Protein_GI_number: 16128624 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rare lipoprotein B # Organism: Escherichia coli K12 # 1 161 33 193 193 273 100.0 8e-74 MKVMILDSGDPNGPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRN GQTAEYQMIMTVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAA EQLIRKLPSIRAADIRSDEEQTSTTTDTPATPARVSTTLGN >gi|299857052|gb|ADWS01000012.1| GENE 49 57293 - 58324 821 343 aa, chain + ## HITS:1 COG:ECs0678 KEGG:ns NR:ns ## COG: ECs0678 COG1466 # Protein_GI_number: 15829932 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Escherichia coli O157:H7 # 1 343 1 343 343 604 99.0 1e-172 MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTD WNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA QENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLA LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNRLSQPQLRQ AVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG >gi|299857052|gb|ADWS01000012.1| GENE 50 58326 - 58967 461 213 aa, chain + ## HITS:1 COG:nadD KEGG:ns NR:ns ## COG: nadD COG1057 # Protein_GI_number: 16128622 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Escherichia coli K12 # 1 213 1 213 213 415 100.0 1e-116 MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPEANSVQRKHML ELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEY ETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPEDLHLQPAGKIYLAETPWFNIS ATIIRERLQNGESCEDLLPEPVLTYINQQGLYR >gi|299857052|gb|ADWS01000012.1| GENE 51 58991 - 59602 372 203 aa, chain + ## HITS:1 COG:phpB KEGG:ns NR:ns ## COG: phpB COG0406 # Protein_GI_number: 16128621 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Escherichia coli K12 # 1 203 1 203 203 407 99.0 1e-114 MRLWLIRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLHGVSFDLVLCSELERAQH TARLVLSDRQLPVQIIPELNEMFFGDWEMRHHRDLMQEDAENYSAWCNDWQHAIPTNGEG FQAFSQRVERFIARLSEFQHYQNILVVSHQGVLSLLIARLIGMPAEAMWHFRVDQGCWST IDINQKFATLRVLNSRAIGVENA >gi|299857052|gb|ADWS01000012.1| GENE 52 59862 - 60179 285 105 aa, chain + ## HITS:1 COG:STM0642 KEGG:ns NR:ns ## COG: STM0642 COG0799 # Protein_GI_number: 16764019 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Salmonella typhimurium LT2 # 1 105 1 105 105 187 97.0 3e-48 MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESR AAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS >gi|299857052|gb|ADWS01000012.1| GENE 53 60183 - 60650 496 155 aa, chain + ## HITS:1 COG:ECs0674 KEGG:ns NR:ns ## COG: ECs0674 COG1576 # Protein_GI_number: 15829928 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 303 99.0 9e-83 MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQM LAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSW SLSTLTLPHPLVRVLVAESLYRAWSITTNHPYHRE >gi|299857052|gb|ADWS01000012.1| GENE 54 60681 - 62582 1990 633 aa, chain + ## HITS:1 COG:ECs0673 KEGG:ns NR:ns ## COG: ECs0673 COG0768 # Protein_GI_number: 15829927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Escherichia coli O157:H7 # 1 633 1 633 633 1295 100.0 0 MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIK LVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTLDALRSVVDLTDDDIAAFR KERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVS KINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLK EVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDG ISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTTLFDPGWWQL PGSEKRYRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYTGID LAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVKV PHLLMSTAEDGKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPNGTAHKYFASAPYK IAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAV GTLMRQILDHIMLGDNNTDLPAENPAVAAAEDH >gi|299857052|gb|ADWS01000012.1| GENE 55 62641 - 63696 940 351 aa, chain + ## HITS:1 COG:ECs0672 KEGG:ns NR:ns ## COG: ECs0672 COG0772 # Protein_GI_number: 15829926 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Escherichia coli O157:H7 # 1 351 20 370 370 572 100.0 1e-163 MLLILLALLVYSALVIWSASGQDIGMMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLY IICIILLVAVDAFGAISKGAQRWLDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKN TGIALVLIFMPTLLVAAQPDLGTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILW FFLMHDYQRQRVMMLLDPESDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPER HTDFIFAVLAEELGLVGILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVF VNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV >gi|299857052|gb|ADWS01000012.1| GENE 56 63707 - 64795 902 362 aa, chain + ## HITS:1 COG:rlpA KEGG:ns NR:ns ## COG: rlpA COG0797 # Protein_GI_number: 16128616 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Escherichia coli K12 # 1 362 1 362 362 566 99.0 1e-161 MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEISGADPRFEPLNATANQD YQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFDPTQLTAAHPTLPIPSYAR ITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSNNTKVRIDPIIVAQDGSLSGP GMACTTVAKQTYALPAPPDLSGGAGASSVSGPQGDILPVSNSTLKSEDPTGAPVTSSGFL GAPTTLAPGVLESSEPTPAPQPVVTAPSTTPATSPAMVTPQAASQSASGNFMVQVGAVSD QARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGPFASKAEASTLQQRLQTEAQLQSFITT AQ >gi|299857052|gb|ADWS01000012.1| GENE 57 64935 - 66146 1284 403 aa, chain + ## HITS:1 COG:ZdacA KEGG:ns NR:ns ## COG: ZdacA COG1686 # Protein_GI_number: 15800346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 EDL933 # 1 403 1 403 403 825 100.0 0 MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVL AEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFL KPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVH GLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDG IKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKV GKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGT INFQLDGKTIEQRPLVVLQEIPEGNFFGKIIDYIKLMFHHWFG >gi|299857052|gb|ADWS01000012.1| GENE 58 66257 - 66520 335 87 aa, chain + ## HITS:1 COG:ECs0669 KEGG:ns NR:ns ## COG: ECs0669 COG2921 # Protein_GI_number: 15829923 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 157 100.0 5e-39 MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTPTVKPSSKGNYHSVSI TINATHIEQVETLYEELGKIDIVRMVL >gi|299857052|gb|ADWS01000012.1| GENE 59 66621 - 67262 538 213 aa, chain + ## HITS:1 COG:ECs0668 KEGG:ns NR:ns ## COG: ECs0668 COG0321 # Protein_GI_number: 15829922 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Escherichia coli O157:H7 # 23 213 1 191 191 401 100.0 1e-112 MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHYPVFTQGQAGKAEHILM PGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAELGIEA HPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDLSPFLRINPCGYAGMEMAKIS QWKPEATTNNIAPRLLENILALLNNPDFEYITA >gi|299857052|gb|ADWS01000012.1| GENE 60 67521 - 68474 612 317 aa, chain + ## HITS:1 COG:ybeF KEGG:ns NR:ns ## COG: ybeF COG0583 # Protein_GI_number: 16128612 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 52 317 1 266 266 525 99.0 1e-149 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS LRDPILHGVIDVIRNAF >gi|299857052|gb|ADWS01000012.1| GENE 61 68683 - 69648 890 321 aa, chain + ## HITS:1 COG:ECs0666 KEGG:ns NR:ns ## COG: ECs0666 COG0320 # Protein_GI_number: 15829920 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 657 100.0 0 MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIKLPADSTRIQGIKAAMR KNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVAHGRPVAPDANEPVKLA QTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKSPQIKIETLVPDFRGRMDRAL DILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLLERFKEAHPEIPTKSGLMVGLGE TNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQRYVSPDEFDEMKAEALAMGFTHAA CGPFVRSSYHADLQAKGMEVK >gi|299857052|gb|ADWS01000012.1| GENE 62 69749 - 69958 178 69 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 59 1 59 83 73 57 6e-12 VSMGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDAAAKKGADVDL QAEKLSHKE >gi|299857052|gb|ADWS01000012.1| GENE 63 70081 - 70869 762 262 aa, chain - ## HITS:1 COG:ECs0664 KEGG:ns NR:ns ## COG: ECs0664 COG0388 # Protein_GI_number: 15829918 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 501 100.0 1e-142 MLVAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLARDDHDADLSVKSAQLL EGEFLGRLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAGNIVARYAKLHLYDAFAIQ ESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQALQGAEILVLPAAWVRGPLKE HHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPFGVTIAAASEMPALIMAEVTPER VRQVRAQLPVLNNRRFAPPQLL >gi|299857052|gb|ADWS01000012.1| GENE 64 70962 - 71345 154 127 aa, chain + ## HITS:1 COG:ECs0663 KEGG:ns NR:ns ## COG: ECs0663 COG0239 # Protein_GI_number: 15829917 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Escherichia coli O157:H7 # 1 127 1 127 127 202 100.0 1e-52 MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTN IDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWL FSASTAH >gi|299857052|gb|ADWS01000012.1| GENE 65 71399 - 71608 330 69 aa, chain - ## HITS:1 COG:ECs0662 KEGG:ns NR:ns ## COG: ECs0662 COG1278 # Protein_GI_number: 15829916 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 124 100.0 4e-29 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG PSAANVIAL >gi|299857052|gb|ADWS01000012.1| GENE 66 71783 - 72343 464 186 aa, chain - ## HITS:1 COG:no KEGG:B21_00581 NR:ns ## KEGG: B21_00581 # Name: crcA # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 186 1 186 186 351 100.0 6e-96 MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHAR FAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRP LADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFA WMRFQF >gi|299857052|gb|ADWS01000012.1| GENE 67 72932 - 74317 1419 461 aa, chain + ## HITS:1 COG:ECs0660 KEGG:ns NR:ns ## COG: ECs0660 COG3069 # Protein_GI_number: 15829914 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 461 1 461 461 631 99.0 1e-180 MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAIMGHKVLPSSQASTGYS ATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLM IAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRRAAAAICASPAAIILAPTSGD VVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKEHISHEMLDVSEITT TAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVICMLIASILEFLRSFNTQKVFSGLE VAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQSLISIATSFGSASIILMLVLVILTML AAVTTGSGNAPFYAFVEMIPKLAHSSGINPAYLTIPMLQASNLGRTLSPVSGVVVAVAGM AKISPFEVVKRTSVPVLVGLVIVIVATELMVPGTAAAVTGK >gi|299857052|gb|ADWS01000012.1| GENE 68 74358 - 75038 263 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 5 223 1 221 226 105 28 8e-22 MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYL PDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTR FRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGIDPLTLNAVRKLFKEPGVQHTA ETVAQALTISRTTARRYLEYCASRHLIIAEIVHGKVGRPQRIYHSG >gi|299857052|gb|ADWS01000012.1| GENE 69 75007 - 76665 1414 552 aa, chain - ## HITS:1 COG:citA KEGG:ns NR:ns ## COG: citA COG3290 # Protein_GI_number: 16128602 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Escherichia coli K12 # 1 552 1 552 552 1109 99.0 0 MLQLNENKQFAFFQRLAFPLRIFLLILVFSIFVIAALAQYFTASFEDYLTLHVRDMAMNQ AKIIASNDSVISAVKTRDYKRLATIANKLQRDTDFDYVVIGDRHSIRLYHPNPEKIGYPM QFTKQGALEKGESYFITGKGSMGMAMRAKTPIFDDDGKVIGVVSIGYLVSKIDSWRAEFL LPMAGVFVVLLGILMLLSWFLAAHIRRQMMGMEPKQIARVVRQQEALFSSVYEGLIAVDP HGYITAINRNARKMLGLSSPGRQWLGKPIAEVVRPADFFTEQIDEKRQDVVANFNGLSVI ANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQIKQYVESLRTLRHEHLNWMSTLNGLL QMKEYDRVLAMVQGESQAQQQLIDSLREAFADRQVAGLLFGKVQRARELGLKMIIVPGSQ LSQLPPGLDSTEFAAIVGNLLDNAFEASLRSDEGNKIVELFLSDEGDDVVIEVADQGCGV PESLRDKIFEQGVSTRADEPGEHGIGLYLIASYVTRCGGVITLEDNDPCGTLFSIYIPKV KPNDSSINPIDR >gi|299857052|gb|ADWS01000012.1| GENE 70 77045 - 78103 868 352 aa, chain + ## HITS:1 COG:citC KEGG:ns NR:ns ## COG: citC COG3053 # Protein_GI_number: 16128601 # Func_class: C Energy production and conversion # Function: Citrate lyase synthetase # Organism: Escherichia coli K12 # 1 352 30 381 381 724 100.0 0 MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIK CVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVM VLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLV KEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEID LKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQ EMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA >gi|299857052|gb|ADWS01000012.1| GENE 71 78118 - 78414 276 98 aa, chain + ## HITS:1 COG:ECs0656 KEGG:ns NR:ns ## COG: ECs0656 COG3052 # Protein_GI_number: 15829910 # Func_class: C Energy production and conversion # Function: Citrate lyase, gamma subunit # Organism: Escherichia coli O157:H7 # 1 98 1 98 98 179 98.0 1e-45 MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDAIRTTILDVLARYNVRG VQLNVDDKGALDFILRARLEALLARASGIPALPWEDCQ >gi|299857052|gb|ADWS01000012.1| GENE 72 78411 - 79319 1150 302 aa, chain + ## HITS:1 COG:citE KEGG:ns NR:ns ## COG: citE COG2301 # Protein_GI_number: 16128599 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Escherichia coli K12 # 1 302 6 307 307 542 100.0 1e-154 MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREKDTARRMVY HALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRLPKTDTAQDVLDIEKEILR IEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGIALGAEDYVRNLRTERSPEGT ELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEAAHIKQLGFDGKSLINPRQIDLL HNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNGKMVDGPVIDRARLVLSRAELSGIR EE >gi|299857052|gb|ADWS01000012.1| GENE 73 79330 - 80862 1663 510 aa, chain + ## HITS:1 COG:citF KEGG:ns NR:ns ## COG: citF COG3051 # Protein_GI_number: 16128598 # Func_class: C Energy production and conversion # Function: Citrate lyase, alpha subunit # Organism: Escherichia coli K12 # 1 510 1 510 510 1008 99.0 0 MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDRKLCANLEEAIRRSGLQ DGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSDCHAPLVEHIRQGVVTRIY TSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNIDVAFLGVPSCDEFGNANGYT GKACCGSLGYAMVDADNAKQVVMLTEELLPYPHNPASIEQDQVDLIVKVDRVGDAAKIGA GATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQTGTGGASLAVTRFLEDKMRSRDIRA DFALGGITATMVDLHEKGLIRKLLDVQSFDSHAAQSLARNPNHIEISANQYANWGSKGAS VDRLDVVVLSALEIDTQFNVNVLTGSDGVLRGASGGHCDTAIASALSIIVAPLVRGRIPT LVDNVLTCITPGSSVDILVTDHGIAVNPARPELAERLQEAGIKVVSIEWLRERARLLTGE PQPIEFTDRVVAVVRYRDGSVIDVVHQVKE >gi|299857052|gb|ADWS01000012.1| GENE 74 80866 - 81417 330 183 aa, chain + ## HITS:1 COG:ECs0653 KEGG:ns NR:ns ## COG: ECs0653 COG3697 # Protein_GI_number: 15829907 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 350 100.0 1e-96 MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPGPIKDSEVTRRI FNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRL WDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKTHQLTDLLNRMEALLNDVDAC NVN >gi|299857052|gb|ADWS01000012.1| GENE 75 81392 - 82270 630 292 aa, chain + ## HITS:1 COG:citG KEGG:ns NR:ns ## COG: citG COG1767 # Protein_GI_number: 16128596 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Escherichia coli K12 # 1 292 1 292 292 560 100.0 1e-160 MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHR SALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLG LLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGAR GEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWL QREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLAQI >gi|299857052|gb|ADWS01000012.1| GENE 76 82321 - 83784 1615 487 aa, chain + ## HITS:1 COG:ECs0651 KEGG:ns NR:ns ## COG: ECs0651 COG0471 # Protein_GI_number: 15829905 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 487 1 487 487 867 100.0 0 MSLAKDNIWKLLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAMIVGMILEPIPATAISF IAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSSTTVWLVFGAFIFALGYEVS GLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKS FPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQWFLCF LPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDELKTMGALTRREWTLIGLVLLSLGL WVFGSEVINATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGF IDWFAGTMSTHLEGFSPNATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVP MEQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVGW PILAMWN >gi|299857052|gb|ADWS01000012.1| GENE 77 83880 - 84704 472 274 aa, chain + ## HITS:1 COG:rna KEGG:ns NR:ns ## COG: rna COG3719 # Protein_GI_number: 16128594 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease I # Organism: Escherichia coli K12 # 7 274 1 268 268 549 99.0 1e-156 MSSTPIMKAFWRNAALLAVSLLPFSSANALALQAKQYGDFDRYVLALSWQTGFCQSQHDR NRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPIPNLPEA HASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACFGFDPDAYFGTMVRL NQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKLTCQGNPAYLTEIQISI KADAINAPLSANSFLPQPHPGNCGKTFVIDKVGY >gi|299857052|gb|ADWS01000012.1| GENE 78 84934 - 85344 367 136 aa, chain + ## HITS:1 COG:ECs0649 KEGG:ns NR:ns ## COG: ECs0649 COG0782 # Protein_GI_number: 15829903 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 259 100.0 7e-70 MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE VLELEYQPEAAGDYLL >gi|299857052|gb|ADWS01000012.1| GENE 79 85575 - 86813 866 412 aa, chain - ## HITS:1 COG:ECs0647 KEGG:ns NR:ns ## COG: ECs0647 COG1063 # Protein_GI_number: 15829901 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 412 1 412 412 830 99.0 0 MKALTYHGPHHVQVENVPDPGIEQADDIILRITATAICGSDLHLYRGKIPQVKHGDIVGH EFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRLQQYAACENTNAGKGAALNKKQI PAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLLSDDKALFLSDILPTAWQAAK NAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVDHHPYRLRFAADRYGAIPINFDE DSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTETVLTNLKLEGSSGKALRQCIAAVRR GGIVSVPGVYAGFIHGFLFGDAFDKGLTFKMGQTHVHAWLGELLPLIEKGLLKPEEIVTH YMPFEEAARGYEIFEKREEECRKVILVPGAQSAEAAQKAVSGLVNAMPGGTI >gi|299857052|gb|ADWS01000012.1| GENE 80 86932 - 87138 81 68 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_0629 NR:ns ## KEGG: EcE24377A_0629 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 13 68 1 56 56 93 98.0 2e-18 MNNSVILGEEFSVANSFVAQFHFKYINWHNDCLIHNPFSLLIMNKSFAMIIIFIPDICLV LFPYERFL >gi|299857052|gb|ADWS01000012.1| GENE 81 87034 - 87462 496 142 aa, chain + ## HITS:1 COG:ECs0646 KEGG:ns NR:ns ## COG: ECs0646 COG0589 # Protein_GI_number: 15829900 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 142 1 142 142 252 100.0 1e-67 MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEE HLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAEELGADVVVIGSRNPSIST HLLGSNASSVIRHANLPVLVVR >gi|299857052|gb|ADWS01000012.1| GENE 82 87583 - 89148 411 521 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 213 515 2 303 306 162 31 5e-39 MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNSLPV RKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRHIDGDFE FETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQNEITDRNVMGVPAVFVNGKE FGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIVGSGPAGAAAAIYSARKGIRTGL MGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEG GLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAV IGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGD GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNV KGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTKTA >gi|299857052|gb|ADWS01000012.1| GENE 83 89147 - 89338 101 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|188495373|ref|ZP_03002643.1| ## NR: gi|188495373|ref|ZP_03002643.1| hypothetical protein Ec53638_0709 [Escherichia coli 53638] # 1 38 1 38 38 69 97.0 7e-11 MFISWALNIIMQAASAATWMQLASWCGEENRVPQHPINYAIAELRFYQPGPETEPELLHL LSI >gi|299857052|gb|ADWS01000012.1| GENE 84 89277 - 89840 639 187 aa, chain - ## HITS:1 COG:ECs0644 KEGG:ns NR:ns ## COG: ECs0644 COG0450 # Protein_GI_number: 15829898 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 381 100.0 1e-106 MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEE LQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADR ATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVASHPGEVCPAKWKEGEATLAPS LDLVGKI >gi|299857052|gb|ADWS01000012.1| GENE 85 90212 - 90958 664 248 aa, chain + ## HITS:1 COG:ECs0643 KEGG:ns NR:ns ## COG: ECs0643 COG1651 # Protein_GI_number: 15829897 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Escherichia coli O157:H7 # 12 248 32 268 268 469 98.0 1e-132 MLKKILLLALLPAIAFAEELPSPVKAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYL TPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYV FADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQEYE SSGGKLKLNVPANVSTEQMKVLSANEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKT LNIIMGNK >gi|299857052|gb|ADWS01000012.1| GENE 86 91166 - 92068 495 300 aa, chain + ## HITS:1 COG:ybdO KEGG:ns NR:ns ## COG: ybdO COG0583 # Protein_GI_number: 16128586 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 300 1 300 300 561 98.0 1e-160 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS GKGIAPTTTGLNLHHHLEKNLKGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL RQDASVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNK HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDEKFMNRKISFRGSSLLTIINSIAV TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF >gi|299857052|gb|ADWS01000012.1| GENE 87 92215 - 93435 649 406 aa, chain + ## HITS:1 COG:ECs0641 KEGG:ns NR:ns ## COG: ECs0641 COG3969 # Protein_GI_number: 15829895 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 838 100.0 0 MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLMLHLTAELARQMGKKICV LFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWV RQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPAAMMIGIRADESYNRFVAIAS LNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQSLCNPLYNLMYQAGVPL RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKP EHLDWQEYALLLLNSMPEKTAEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRR ICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWGILCNND >gi|299857052|gb|ADWS01000012.1| GENE 88 93420 - 94037 514 205 aa, chain + ## HITS:1 COG:ECs0640 KEGG:ns NR:ns ## COG: ECs0640 COG1475 # Protein_GI_number: 15829894 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 205 5 209 209 407 99.0 1e-114 MQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYN PNNVAPPEKKLLKKSIEIDGFTQPIVVTHTDKNALEIVDGFHRHEIGKGSSSLKLRLKGY LPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEV LRLKQINGLQELFADRQYSRAWTVK >gi|299857052|gb|ADWS01000012.1| GENE 89 94038 - 95198 963 386 aa, chain - ## HITS:1 COG:ECs0639 KEGG:ns NR:ns ## COG: ECs0639 COG0436 # Protein_GI_number: 15829893 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli O157:H7 # 1 386 1 386 386 766 98.0 0 MTNNPLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAYHVAQGA NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC FDPSYDSYSPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVW QQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHM TGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRD ILVNALNESRLEILPCEGTYFLLVDYSEVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPF PHKLIRLCFAKKESTLLAAAERLRQL >gi|299857052|gb|ADWS01000012.1| GENE 90 95307 - 96395 1121 362 aa, chain + ## HITS:1 COG:ybdH KEGG:ns NR:ns ## COG: ybdH COG0371 # Protein_GI_number: 16128582 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 1 362 1 362 362 692 98.0 0 MPHNPIRVVVGPANYFSHPGSFNHLHDFFTDEQLSRAVWIYGKRAIAAAQTKLPPAFGLP GAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTAKALARRLGLPFVAAPTIA ATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIILNAPQQYLLAGIGDTLAKWYE AVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALSDQQNQQLTQSFCDVVDAIIAGG GMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLTG AYQRFHLPTTLAELEVDINNHAEIDKVITHTLRPVESIHYLPVTLTPDTLRAAFEKVESF KA >gi|299857052|gb|ADWS01000012.1| GENE 91 96405 - 96602 256 65 aa, chain - ## HITS:1 COG:ybdD KEGG:ns NR:ns ## COG: ybdD COG2879 # Protein_GI_number: 16132239 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli K12 # 1 65 1 65 65 129 100.0 1e-30 MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKG GARCC >gi|299857052|gb|ADWS01000012.1| GENE 92 96784 - 98889 2579 701 aa, chain - ## HITS:1 COG:cstA KEGG:ns NR:ns ## COG: cstA COG1966 # Protein_GI_number: 16128581 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Escherichia coli K12 # 1 701 1 701 701 1283 99.0 0 MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCIYLIAYRFYGLYIAKNV LAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWL LAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVIALVACFMIMVIILAVLAM IVVKALTHSPWGTYTVAFTIPLAIFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVA ESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILI MRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQA CFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVLAPAGTADVVASAAQVVSSWG FSITPDTLNQIASEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMDVAFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDP LGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQK AFSPDAKVGFLAIANKFQAMIDSGNIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLA LFSIKTALAALKDPKPTAKETPYEPMPENVEEIVAQAKGAH >gi|299857052|gb|ADWS01000012.1| GENE 93 99070 - 99483 393 137 aa, chain - ## HITS:1 COG:ybdB KEGG:ns NR:ns ## COG: ybdB COG2050 # Protein_GI_number: 16128580 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 137 1 137 137 275 100.0 1e-74 MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAA LAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVCQPLHLGRQNQSWEIVVFD EQGRRCCTCRLGTAVLG >gi|299857052|gb|ADWS01000012.1| GENE 94 99486 - 100232 963 248 aa, chain - ## HITS:1 COG:ECs0635 KEGG:ns NR:ns ## COG: ECs0635 COG1028 # Protein_GI_number: 15829889 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 451 98.0 1e-127 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAGQVA QVCQRLLAETERLDVLINAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRR QRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTD MQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVV DGGSTLGA >gi|299857052|gb|ADWS01000012.1| GENE 95 100232 - 101089 1090 285 aa, chain - ## HITS:1 COG:entB_1 KEGG:ns NR:ns ## COG: entB_1 COG1535 # Protein_GI_number: 16128578 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate hydrolase # Organism: Escherichia coli K12 # 1 215 1 215 215 436 99.0 1e-122 MAIPKLQAYALPESHDIPKNKVDWAFEPQRAALLIHDMQDYFVSFWGENCPMMEQVIANI AALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQKVVDRLTPDADDTV LVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALAD FSRDEHLMSLKYVAGRSGRVVMTEELLPAPVPASKAALREVILPLLDESDEPFDDDNLID YGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAWWKLLSREVK >gi|299857052|gb|ADWS01000012.1| GENE 96 101103 - 102713 1632 536 aa, chain - ## HITS:1 COG:entE KEGG:ns NR:ns ## COG: entE COG1021 # Protein_GI_number: 16128577 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Peptide arylation enzymes # Organism: Escherichia coli K12 # 1 536 1 536 536 1089 99.0 0 MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVIDGERQLSYRELNQAADN LACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQRSELNAYASQIE PALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLHNDSGEHNLQDAINHPAEDFTATPSP ADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSS PGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALTEGESRAQLA SLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMC PDDEVWVADAEGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISID PEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLVV KEPLRAVQVRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRASA >gi|299857052|gb|ADWS01000012.1| GENE 97 102723 - 103898 1140 391 aa, chain - ## HITS:1 COG:ECs0632 KEGG:ns NR:ns ## COG: ECs0632 COG1169 # Protein_GI_number: 15829886 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 755 99.0 0 MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAAL FADAKAQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEKQTSARRFTRSQSLNVVER QAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDSGVLLERLIAQNPVSYN FHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRH EHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKVNSQENALTLACLLHP TPALSGFPHQAATQVIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFA GAGIVPASSPLGEWRETGVKLSTMLNVFGLH >gi|299857052|gb|ADWS01000012.1| GENE 98 104273 - 105229 1002 318 aa, chain + ## HITS:1 COG:ECs0631 KEGG:ns NR:ns ## COG: ECs0631 COG4592 # Protein_GI_number: 15829885 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe2+-enterobactin transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 570 98.0 1e-162 MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSL LAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLIL ISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLGEITGHEKQAAERIAQFDKQL AAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQG KRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETF RLDYYSATQVLERLKALF >gi|299857052|gb|ADWS01000012.1| GENE 99 105233 - 106483 1152 416 aa, chain - ## HITS:1 COG:ybdA KEGG:ns NR:ns ## COG: ybdA COG0477 # Protein_GI_number: 16128574 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 416 1 416 416 574 99.0 1e-163 MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQIQMMTHSTWQVGLSVTL TGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLNALLPEPSLLAIYLLGLWD GFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLLATGGVAWNYG LAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFRFLLASPLVGGIALLGGLLTMAS AVRVLYPALADNWQMSAAQIGFLYAAIPLGAAIGALTSGKLAHSARPGLLMLLSTLGSFL AIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYTMLQTQTPEAMLGRINGLWTAQNVTGD AIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLVELRRFRQTPPQVTASDS >gi|299857052|gb|ADWS01000012.1| GENE 100 106582 - 107598 1324 338 aa, chain + ## HITS:1 COG:ECs0629 KEGG:ns NR:ns ## COG: ECs0629 COG0609 # Protein_GI_number: 15829883 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 5 338 1 334 334 449 99.0 1e-126 MEVRMSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEALSGTCQSADCTIV LDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSS AQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLTSGIALLNPDV YDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVAR TQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFA DIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA >gi|299857052|gb|ADWS01000012.1| GENE 101 107595 - 108587 932 330 aa, chain + ## HITS:1 COG:fepG KEGG:ns NR:ns ## COG: fepG COG4779 # Protein_GI_number: 16128572 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterobactin transport system, permease component # Organism: Escherichia coli K12 # 1 330 1 330 330 466 99.0 1e-131 MIYVSRRLIITCLLLVSACVVAGIWGLRSGAVTLETSQVFAALMGDAPRSMTMVVTEWRL PRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWSGVLVAMVLFGQDLTAIAL AAMVGGIITSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVAFNTWLLLKASLETALTAGLW NAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLEMGDDTACALGVSVERSRLLMML VAVVLTAAATALAGPISFIALVAPHIARRISGTARWGLTQAALCGALLLLAADLCAQQLF MPYQLPVGVVTVSLGGIYLIVLLIQESRKK >gi|299857052|gb|ADWS01000012.1| GENE 102 108584 - 109399 197 271 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 8 232 9 228 309 80 25 3e-14 MNESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED EEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQI DLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERI YGLRCMIIDDPVAGTPLVVPLGRTAPSTANS >gi|299857052|gb|ADWS01000012.1| GENE 103 109396 - 110529 948 377 aa, chain - ## HITS:1 COG:ECs0626 KEGG:ns NR:ns ## COG: ECs0626 COG3765 # Protein_GI_number: 15829880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 705 98.0 0 MSSLNIKQGSDAHFSEYPLASPSNNEIDLLNLIAVLWRAKKTVMAVIFAFACAGLLISFI LPQKWTSAAVVTPPEPVQWQELEKTFTKLRVLDLDIKIDRTEAFNLFIKKFQSVSLLEEY LRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNASKKKDEPSLYTSWTLSFTAPT SKEAQTVLSGYIDYISALVVKESIENVRNKLEIKTQFEKEKLAQDRIKTKNQLDANIQRL NYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGADGIERKLEIEKAVTDVAELNGELRN RQYLVEQLTKANINDVNFTPFKYQLSPSLPVKKDGPGKAIIVILSALIGGMVACGSVLLR YAMASRKQDAMMADHLV >gi|299857052|gb|ADWS01000012.1| GENE 104 110746 - 114627 3545 1293 aa, chain - ## HITS:1 COG:entF_1 KEGG:ns NR:ns ## COG: entF_1 COG1020 # Protein_GI_number: 16128569 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Escherichia coli K12 # 1 1060 1 1060 1060 1971 97.0 0 MSQHLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELTGDVDAPLLARAVVVGLAQADTLRM RFTEDNGEVWQWVDDALIFELPEIIDLRTNIDPHGTAQVLMLADLQQDLRVDSGKPLVFH QLIHVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTWLRGEPTPASPFTPFADVVEE YQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLAGRSASADILRLKLEFTDGEFRQLA TQLSGVQRTDLALALAALWLGRLCNRMDYAAGFIFMRRLGSAALTASGPVLNVLPLGIHI AAQETLPELATRLAAQLKKMRRHQRYDAEQIVRDSGRAAGEEPLFGPVLNIKVFDYQLDI PGVQTQTHTLATGPVNDLELALFPDEHGDLSIEILANKQRYDEPTLIQHAERLKMLIAQF AADPALLCGDVDIMLPGEYAQLAQINATQVEIPETTLSALVAEQAAKTPDAPALADARYL FSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYP DDRLKMMLEDARPSLLITTDDQLPRFSDVPNLTSLCYNAPLTPQGSAPLQLSQPHHTAYI IFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTGEDVVAQKTPCSFDVSVWEFFWPFIA GAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPQTARQNCATLKQVF CSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVW NTGLRILDAMMHPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGD VARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRVMQALPDVKQAVTHACVINLAAATGG DARQLVGYLVSQSGLPLDTSALQAQLRETLPPHMVPVVLLQLPQLPLSANGKLDRKALPL PELKTQASGRAPKAGSEKIIAAAFASLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQF ARQVTPGQVMVASTVAKLATIIDGEEDSSRRMGFETILPLREGNGPTLFCFHPASGFAWQ FSVLSRYLDPQWSIIGIQSPRPHGPMQTATNLDEVCEAHLATLLEQQPHGPYYLLGYSLG GTLVQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAA QQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIA ELDIYRQDCAHVDIISPGAFVKIGPIIRATLNR >gi|299857052|gb|ADWS01000012.1| GENE 105 114624 - 114842 273 72 aa, chain - ## HITS:1 COG:Z0726 KEGG:ns NR:ns ## COG: Z0726 COG3251 # Protein_GI_number: 15800300 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 72 1 72 72 119 97.0 2e-27 MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCALPAGWDIVCQPQSQASCQQWLEVHWRTL TPANFTQLQEAQ >gi|299857052|gb|ADWS01000012.1| GENE 106 114845 - 116047 766 400 aa, chain - ## HITS:1 COG:ECs0624 KEGG:ns NR:ns ## COG: ECs0624 COG2382 # Protein_GI_number: 15829878 # Func_class: P Inorganic ion transport and metabolism # Function: Enterochelin esterase and related enzymes # Organism: Escherichia coli O157:H7 # 27 400 1 374 374 722 99.0 0 MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYSTIKRVWIYITGVTDHH QNSQPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIFSAPSPDRLELREGWRKLL PQAIADPLNPQSWKGGRGHAVSALEMPQAPLQPGWDCPQAPEIAAKEIIWKSERLKNSRR VWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHR AHELPCNADFWLAVQQELLPLVKAIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGC VLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMIMRANQALYAQLH PIKESIFWRQVDGGHDALCWRGGLMQGLIDLWQPLFHDRS >gi|299857052|gb|ADWS01000012.1| GENE 107 116290 - 118530 2613 746 aa, chain + ## HITS:1 COG:fepA KEGG:ns NR:ns ## COG: fepA COG4771 # Protein_GI_number: 16128567 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Escherichia coli K12 # 1 746 1 746 746 1441 99.0 0 MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQNLQAPGVSTITADEIRK NPVARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNSVR QGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITQKGSGEWHGSWD AYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLDKTQADAWDINQGHQSARAGTYA TTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNSDAYTRSKYG DETNRLYRQNYALTWNGGWDNGVTTSNWVQYEHTRNSRIPEGLAGGTEGKFNEKATQDFV DIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWNQQRMKDLSSNTQALTGANTGGAIDGVSA TDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTL KMGIARAYKAPSLYQTNPNYILYSKGQGCYASAGGCYLQGNDDLKAETSINKEIGLEFKR DGWLAGVTWFRNDYRNKIEAGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETV MWTNNITYMLKSENKTTGDRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNY KGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGA NYIAGAGAYTYNEPGRTWYMSVNTHF >gi|299857052|gb|ADWS01000012.1| GENE 108 118696 - 119325 396 209 aa, chain + ## HITS:1 COG:ECs0622 KEGG:ns NR:ns ## COG: ECs0622 COG2977 # Protein_GI_number: 15829876 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phosphopantetheinyl transferase component of siderophore synthetase # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 422 99.0 1e-118 MVDMKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGRKRKAEHLAGRIAA IYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGATALAVVSRQPIGVDIEEIFSAQTA TELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEIQTDAGFLDYQIISWNKQ QVIIHRENEMFAVHWQIKEKIVITLCQHD >gi|299857052|gb|ADWS01000012.1| GENE 109 119447 - 119599 126 50 aa, chain - ## HITS:1 COG:no KEGG:EFER_2525 NR:ns ## KEGG: EFER_2525 # Name: not_defined # Def: putative small toxic membrane polypeptide, putative HokE-like protein (partial) # Organism: E.fergusonii # Pathway: not_defined # 1 50 34 83 83 91 100.0 9e-18 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK >gi|299857052|gb|ADWS01000012.1| GENE 110 119950 - 120102 139 50 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A0629 NR:ns ## KEGG: EcHS_A0629 # Name: not_defined # Def: Hok/Gef family protein # Organism: E.coli_HS # Pathway: not_defined # 1 50 34 83 83 90 98.0 2e-17 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKVVLAYEPKK >gi|299857052|gb|ADWS01000012.1| GENE 111 120201 - 120389 103 62 aa, chain - ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 62 222 283 283 124 98.0 5e-29 MVECFFGTLKSECFYLDEFSNISELKDAVTEYIEYYNSRRISLKLKGLTPIEYRNQTYMP RV Prediction of potential genes in microbial genomes Time: Sun May 15 22:11:43 2011 Seq name: gi|299857051|gb|ADWS01000013.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont12.1, whole genome shotgun sequence Length of sequence - 116355 bp Number of predicted genes - 111, with homology - 111 Number of transcription units - 61, operones - 23 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.615 - CDS 56 - 862 730 ## COG0434 Predicted TIM-barrel enzyme 2 1 Op 2 10/0.000 - CDS 875 - 2188 1217 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 3 1 Op 3 1/0.731 - CDS 2200 - 2478 308 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 4 1 Op 4 . - CDS 2475 - 3596 784 ## COG1363 Cellulase M and related proteins - Prom 3656 - 3715 5.1 5 2 Tu 1 . - CDS 3995 - 4255 277 ## ECSE_0267 hypothetical protein - Prom 4298 - 4357 3.7 - Term 4326 - 4379 12.0 6 3 Op 1 3/0.385 - CDS 4383 - 5129 580 ## COG0500 SAM-dependent methyltransferases 7 3 Op 2 1/0.731 - CDS 5181 - 5732 397 ## COG3153 Predicted acetyltransferase 8 3 Op 3 . - CDS 5744 - 6001 260 ## COG3811 Uncharacterized protein conserved in bacteria - Prom 6207 - 6266 5.1 9 4 Tu 1 . - CDS 6356 - 6622 147 ## ECUMN_4909 hypothetical protein - Prom 6650 - 6709 3.5 + Prom 6639 - 6698 2.3 10 5 Tu 1 . + CDS 6844 - 7980 360 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits + Term 8038 - 8078 -0.4 - Term 8342 - 8377 -0.7 11 6 Tu 1 . - CDS 8563 - 8949 120 ## COG2801 Transposase and inactivated derivatives - Term 9562 - 9602 0.3 12 7 Op 1 . - CDS 9607 - 10713 637 ## COG3055 Uncharacterized protein conserved in bacteria 13 7 Op 2 . - CDS 10733 - 11449 406 ## G2583_5112 hypothetical protein - Prom 11560 - 11619 5.3 - Term 12105 - 12144 -1.0 14 8 Tu 1 . - CDS 12247 - 12642 73 ## ECIAI1_4527 hypothetical protein - Prom 12693 - 12752 2.9 + Prom 12615 - 12674 6.3 15 9 Tu 1 . + CDS 12903 - 13505 28 ## COG0582 Integrase + Prom 13798 - 13857 7.9 16 10 Tu 1 . + CDS 13983 - 14579 369 ## COG0582 Integrase 17 11 Op 1 4/0.231 + CDS 15060 - 15608 471 ## COG3539 P pilus assembly protein, pilin FimA 18 11 Op 2 7/0.077 + CDS 15673 - 16212 335 ## COG3539 P pilus assembly protein, pilin FimA 19 11 Op 3 10/0.000 + CDS 16249 - 16974 417 ## COG3121 P pilus assembly protein, chaperone PapD 20 11 Op 4 6/0.154 + CDS 17041 - 19677 1448 ## COG3188 P pilus assembly protein, porin PapC 21 11 Op 5 4/0.231 + CDS 19687 - 20217 151 ## COG3539 P pilus assembly protein, pilin FimA 22 11 Op 6 . + CDS 20230 - 20733 269 ## COG3539 P pilus assembly protein, pilin FimA 23 11 Op 7 . + CDS 20753 - 21655 509 ## EcSMS35_4847 protein FimH + Term 21801 - 21853 1.5 24 12 Tu 1 . - CDS 21898 - 23241 1523 ## COG2610 H+/gluconate symporter and related permeases - Prom 23266 - 23325 2.4 + Prom 23342 - 23401 4.7 25 13 Op 1 7/0.077 + CDS 23581 - 24765 1487 ## COG1312 D-mannonate dehydratase + Term 24772 - 24808 8.6 26 13 Op 2 3/0.385 + CDS 24846 - 26306 1806 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases + Term 26331 - 26374 8.6 + Prom 26364 - 26423 5.1 27 14 Tu 1 . + CDS 26521 - 27294 895 ## COG2186 Transcriptional regulators + Term 27308 - 27345 4.1 - Term 27310 - 27358 0.3 28 15 Tu 1 . - CDS 27435 - 28265 329 ## ECSE_4598 hypothetical protein - Prom 28427 - 28486 7.2 29 16 Tu 1 . + CDS 28938 - 29330 210 ## EC55989_4992 DNA replication/recombination/repair protein 30 17 Op 1 . - CDS 29323 - 30234 720 ## COG0583 Transcriptional regulator 31 17 Op 2 . - CDS 30299 - 31471 1219 ## EC55989_4994 isoaspartyl dipeptidase (EC:3.4.19.5) 32 17 Op 3 3/0.385 - CDS 31484 - 31945 528 ## COG0700 Uncharacterized membrane protein 33 17 Op 4 . - CDS 31942 - 32289 284 ## COG3314 Uncharacterized protein conserved in bacteria 34 18 Tu 1 . - CDS 32486 - 32635 94 ## COG3314 Uncharacterized protein conserved in bacteria - Prom 32834 - 32893 3.8 + Prom 32777 - 32836 5.0 35 19 Tu 1 . + CDS 32873 - 33427 352 ## COG1859 RNA:NAD 2'-phosphotransferase + Term 33504 - 33552 2.9 36 20 Op 1 2/0.615 - CDS 33440 - 34618 826 ## COG0477 Permeases of the major facilitator superfamily 37 20 Op 2 . - CDS 34686 - 35546 538 ## COG3204 Uncharacterized protein conserved in bacteria 38 20 Op 3 . - CDS 35611 - 35868 172 ## EC55989_5000 hypothetical protein 39 20 Op 4 4/0.231 - CDS 35865 - 36632 449 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 40 20 Op 5 1/0.731 - CDS 36642 - 37793 1337 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB - Prom 37831 - 37890 1.7 41 21 Op 1 4/0.231 - CDS 37909 - 39189 1021 ## COG2733 Predicted membrane protein 42 21 Op 2 . - CDS 39230 - 40462 1203 ## COG0477 Permeases of the major facilitator superfamily - Prom 40686 - 40745 4.5 + Prom 40667 - 40726 4.3 43 22 Tu 1 . + CDS 40929 - 41885 567 ## COG5464 Uncharacterized conserved protein - Term 41898 - 41941 3.3 44 23 Tu 1 . - CDS 42128 - 43540 1089 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 43608 - 43667 3.3 + Prom 43583 - 43642 3.7 45 24 Tu 1 . + CDS 43717 - 43881 98 ## COG5457 Uncharacterized conserved small protein + Term 43888 - 43923 3.6 + Prom 44146 - 44205 4.0 46 25 Tu 1 . + CDS 44251 - 46773 1696 ## COG2366 Protein related to penicillin acylase - Term 46766 - 46816 -0.0 47 26 Op 1 3/0.385 - CDS 46851 - 47807 1025 ## COG0523 Putative GTPases (G3E family) 48 26 Op 2 9/0.000 - CDS 47818 - 48021 272 ## COG2879 Uncharacterized small protein - Term 48032 - 48061 3.5 49 26 Op 3 . - CDS 48071 - 50236 2590 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 50481 - 50540 3.1 - Term 50569 - 50607 6.6 50 27 Op 1 4/0.231 - CDS 50614 - 51126 623 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 51 27 Op 2 . - CDS 51144 - 52706 1747 ## COG2368 Aromatic ring hydroxylase - Prom 52763 - 52822 2.6 - Term 52875 - 52914 3.7 52 28 Op 1 5/0.231 - CDS 52957 - 53847 704 ## COG2207 AraC-type DNA-binding domain-containing proteins 53 28 Op 2 6/0.154 - CDS 53857 - 55233 1353 ## COG0477 Permeases of the major facilitator superfamily - Term 55261 - 55295 0.3 54 29 Op 1 5/0.231 - CDS 55408 - 56196 1120 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 55 29 Op 2 2/0.615 - CDS 56207 - 57010 972 ## COG3971 2-keto-4-pentenoate hydratase 56 29 Op 3 4/0.231 - CDS 57078 - 57458 411 ## COG3232 5-carboxymethyl-2-hydroxymuconate isomerase 57 29 Op 4 4/0.231 - CDS 57468 - 58319 857 ## COG3384 Uncharacterized conserved protein 58 29 Op 5 3/0.385 - CDS 58321 - 59787 1637 ## COG1012 NAD-dependent aldehyde dehydrogenases 59 29 Op 6 . - CDS 59784 - 61073 1223 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - Prom 61135 - 61194 6.8 + Prom 61159 - 61218 8.2 60 30 Tu 1 . + CDS 61345 - 61791 389 ## COG1846 Transcriptional regulators + Prom 61806 - 61865 2.1 61 31 Tu 1 . + CDS 61910 - 63574 1666 ## COG0840 Methyl-accepting chemotaxis protein - Term 63573 - 63614 7.1 62 32 Tu 1 . - CDS 63623 - 64984 1191 ## COG0477 Permeases of the major facilitator superfamily - Prom 65037 - 65096 3.2 - Term 65039 - 65082 1.7 63 33 Tu 1 . - CDS 65199 - 66113 379 ## COG1802 Transcriptional regulators - Prom 66138 - 66197 4.0 + Prom 66102 - 66161 3.9 64 34 Tu 1 . + CDS 66252 - 67274 1022 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 67302 - 67340 3.4 65 35 Tu 1 . - CDS 67413 - 69704 2146 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 69756 - 69815 4.2 - Term 69903 - 69947 5.1 66 36 Op 1 . - CDS 69958 - 70449 486 ## S4661 hypothetical protein 67 36 Op 2 . - CDS 70501 - 71238 786 ## COG1484 DNA replication protein 68 36 Op 3 . - CDS 71241 - 71780 551 ## COG5529 Pyocin large subunit - Prom 71821 - 71880 2.1 - Term 71823 - 71870 7.8 69 37 Op 1 12/0.000 - CDS 71887 - 72360 444 ## COG3610 Uncharacterized conserved protein 70 37 Op 2 . - CDS 72351 - 73175 361 ## COG2966 Uncharacterized conserved protein 71 38 Op 1 . + CDS 73791 - 74465 327 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 72 38 Op 2 . + CDS 74477 - 75100 301 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 75110 - 75145 2.4 73 39 Tu 1 . - CDS 75138 - 75926 596 ## COG4114 Uncharacterized Fe-S protein - Prom 76016 - 76075 6.5 + Prom 75877 - 75936 3.5 74 40 Tu 1 . + CDS 76067 - 76303 207 ## UTI89_C5074 hypothetical protein - TRNA 76342 - 76428 69.1 # Leu CAG 0 0 - TRNA 76463 - 76549 66.6 # Leu CAG 0 0 - TRNA 76578 - 76664 69.1 # Leu CAG 0 0 75 41 Tu 1 . - CDS 76932 - 77963 264 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative - Prom 77986 - 78045 6.0 + Prom 77984 - 78043 3.0 76 42 Op 1 8/0.038 + CDS 78066 - 78479 325 ## COG3050 DNA polymerase III, psi subunit 77 42 Op 2 4/0.231 + CDS 78448 - 78894 753 ## PROTEIN SUPPORTED gi|15804944|ref|NP_290986.1| ribosomal-protein-alanine N-acetyltransferase 78 42 Op 3 3/0.385 + CDS 78909 - 79586 680 ## COG1011 Predicted hydrolase (HAD superfamily) 79 42 Op 4 5/0.231 + CDS 79677 - 81266 1939 ## COG4108 Peptide chain release factor RF-3 + Term 81277 - 81316 8.0 80 43 Tu 1 . + CDS 81659 - 82264 670 ## COG2823 Predicted periplasmic or secreted lipoprotein 81 44 Tu 1 . + CDS 82391 - 82552 171 ## gi|157368899|ref|YP_001476888.1| hypothetical protein Spro_0654 + Term 82579 - 82621 7.2 + Prom 82587 - 82646 2.3 82 45 Op 1 4/0.231 + CDS 82674 - 83747 781 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily 83 45 Op 2 . + CDS 83744 - 84526 776 ## COG0084 Mg-dependent DNase + Term 84549 - 84600 3.0 84 46 Tu 1 . - CDS 84639 - 85373 562 ## COG1180 Pyruvate-formate lyase-activating enzyme - Term 85413 - 85448 4.0 85 47 Tu 1 . - CDS 85474 - 87024 1409 ## JW4343 conserved hypothetical protein - Prom 87128 - 87187 4.7 + Prom 87128 - 87187 4.5 86 48 Tu 1 7/0.077 + CDS 87282 - 88061 1006 ## COG0274 Deoxyribose-phosphate aldolase 87 49 Op 1 4/0.231 + CDS 88188 - 89510 1772 ## COG0213 Thymidine phosphorylase 88 49 Op 2 9/0.000 + CDS 89562 - 90785 1574 ## COG1015 Phosphopentomutase 89 49 Op 3 . + CDS 90865 - 91584 925 ## COG0813 Purine-nucleoside phosphorylase + Term 91615 - 91656 8.6 90 50 Op 1 2/0.615 - CDS 91859 - 92008 156 ## COG1396 Predicted transcriptional regulators 91 50 Op 2 2/0.615 - CDS 92040 - 93056 1123 ## COG0095 Lipoate-protein ligase A 92 50 Op 3 . - CDS 93084 - 93728 756 ## COG3726 Uncharacterized membrane protein affecting hemolysin expression - Prom 93810 - 93869 4.6 + Prom 93737 - 93796 3.1 93 51 Op 1 5/0.231 + CDS 93834 - 94802 1065 ## COG0560 Phosphoserine phosphatase 94 51 Op 2 1/0.731 + CDS 94851 - 96233 1438 ## COG1066 Predicted ATP-dependent serine protease 95 51 Op 3 . + CDS 96254 - 97486 1223 ## COG3172 Predicted ATPase/kinase involved in NAD metabolism - Term 97635 - 97698 2.1 96 52 Tu 1 . - CDS 97793 - 99460 2260 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 99557 - 99616 3.2 97 53 Op 1 4/0.231 + CDS 99671 - 101608 1788 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 98 53 Op 2 . + CDS 101698 - 102024 354 ## COG2973 Trp operon repressor + Term 102046 - 102111 3.1 99 54 Tu 1 . - CDS 102109 - 102630 388 ## COG1986 Uncharacterized conserved protein - Prom 102657 - 102716 4.3 + Prom 102581 - 102640 2.7 100 55 Tu 1 . + CDS 102682 - 103329 628 ## COG0406 Fructose-2,6-bisphosphatase 101 56 Tu 1 . - CDS 103326 - 104195 918 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 104388 - 104447 4.5 + Prom 104302 - 104361 4.3 102 57 Op 1 4/0.231 + CDS 104406 - 104879 503 ## COG3045 Uncharacterized protein conserved in bacteria 103 57 Op 2 40/0.000 + CDS 104892 - 105581 639 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 104 57 Op 3 6/0.154 + CDS 105581 - 107005 1169 ## COG0642 Signal transduction histidine kinase 105 57 Op 4 . + CDS 107063 - 108415 1132 ## COG4452 Inner membrane protein involved in colicin E2 resistance + Term 108432 - 108462 3.0 - Term 108419 - 108449 3.0 106 58 Tu 1 . - CDS 108475 - 109191 838 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 109576 - 109635 8.1 107 59 Tu 1 . + CDS 109827 - 110513 501 ## COG0565 rRNA methylase + Prom 110591 - 110650 4.1 108 60 Op 1 11/0.000 + CDS 110873 - 113335 2224 ## COG0527 Aspartokinases 109 60 Op 2 19/0.000 + CDS 113337 - 114269 734 ## COG0083 Homoserine kinase 110 60 Op 3 . + CDS 114270 - 115556 1435 ## COG0498 Threonine synthase + Term 115580 - 115619 4.2 + Prom 115565 - 115624 2.9 111 61 Tu 1 . + CDS 115770 - 116066 150 ## ECUMN_0005 conserved hypothetical protein; putative exported protein + Term 116101 - 116146 8.1 Predicted protein(s) >gi|299857051|gb|ADWS01000013.1| GENE 1 56 - 862 730 268 aa, chain - ## HITS:1 COG:sgcQ KEGG:ns NR:ns ## COG: sgcQ COG0434 # Protein_GI_number: 16132124 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme # Organism: Escherichia coli K12 # 1 268 1 268 268 553 100.0 1e-157 MSWLKEVIGTEKAVIAMCHLRALPGDPSFDAQLGMNWVIDKAWDDLMALQNGGVDAVMFS NEFSLPYLTKVRPETTAAMARIIGQLMSDIRIPFGVNVLWDPVASFDLAMATGAKFIREI FTGAYASDFGVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTVFN NHPDALCVSGLTAGTRTDSALLKRVKETVPDTVVLANTGVCLENVEEQLSIADGCVTATT FKKDGVFANFVDQARVSQFMEKVHHIRR >gi|299857051|gb|ADWS01000013.1| GENE 2 875 - 2188 1217 437 aa, chain - ## HITS:1 COG:sgcC KEGG:ns NR:ns ## COG: sgcC COG3775 # Protein_GI_number: 16132125 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Escherichia coli K12 # 1 437 1 437 437 702 99.0 0 MFDYILSLGGTVFVPIIMIVIGLIFRIPWLQAIKAGVTVGIGFVGMGLVIVMAIDSLSPP IKVMIERFGLALHVFDVGAGPASGVGYATAIGAMIIPVIFLLNVAMLVTRLTKTMNVDIY NYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWTAKRVQNIVGLEGISIPQGYG SSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGVVLGLIFGLAAGEGFK GCASLMITVAAIMVLFPRMIRLIVEGLMPISDGARKFFQKYFKGREVYIGLDTAVTLGHP TTIAVGLLLIPIMLILASILPGNKVLPLADLPVAPFFICMATVIHRGDLVRTLISGVIVM ITVLLIATQFAPYFTEMALKGGFSFAGESAQISALSVGNMFGWSISELMSLGIIGVVVAV GIVASVVLFLRKRELSE >gi|299857051|gb|ADWS01000013.1| GENE 3 2200 - 2478 308 92 aa, chain - ## HITS:1 COG:STM1613 KEGG:ns NR:ns ## COG: STM1613 COG3414 # Protein_GI_number: 16764957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 1 92 2 93 93 149 93.0 1e-36 MKKILVACGTGMSTSTMIAHKLQEFLTEQGISATTAQCCLNEIPLNCNGMDLIVTSMRTN SDYGIPTLNGAALLTGINDDALKQQIKALLTQ >gi|299857051|gb|ADWS01000013.1| GENE 4 2475 - 3596 784 373 aa, chain - ## HITS:1 COG:sgcX KEGG:ns NR:ns ## COG: sgcX COG1363 # Protein_GI_number: 16132126 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Escherichia coli K12 # 1 373 11 383 383 761 99.0 0 MSFSVQETLFSLLQHNAISGHENAVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDAL RLMIFAHMDEVGFMVRKIEPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSY HFAKGDERTQSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVTLYNPPQLLANDLVCSKALD DRLGCTALLGVADAISTTELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSC DTPDLHDYSEVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAP GVITETGYIQVEQDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTALAGMSAAHFPV EPDSGTTQEAHPL >gi|299857051|gb|ADWS01000013.1| GENE 5 3995 - 4255 277 86 aa, chain - ## HITS:1 COG:no KEGG:ECSE_0267 NR:ns ## KEGG: ECSE_0267 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 82 1 82 83 137 95.0 2e-31 MSQHEQFCQACGMPMSAPDAHSASDQYCAYCSYSNGNLKPWEEAVSGLASFLDSWQKVGP EEAHKRAKRYLTAMPAWAHKAESDLS >gi|299857051|gb|ADWS01000013.1| GENE 6 4383 - 5129 580 248 aa, chain - ## HITS:1 COG:yjhP KEGG:ns NR:ns ## COG: yjhP COG0500 # Protein_GI_number: 16132127 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 248 1 248 248 489 95.0 1e-138 MDIPRIFTISESEHRIHNPFTEEKYATLGRVLRMKPETRILDLGSGSGEMLCTWARDHGI TGTGIDMSSLFTAQARRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGATWIAGGFA GTVELLAQSLKPGGIMLIGEPYWRQLPATDEIAQACGVSSTTDFLTLPGLVSAFDDLGYD VVEMVLADQEGWDRYEAAKWLTMRRWLEANPDDDFAAEVRAELNISPKRHVTYAREYFGW GVFALIAR >gi|299857051|gb|ADWS01000013.1| GENE 7 5181 - 5732 397 183 aa, chain - ## HITS:1 COG:yjhQ KEGG:ns NR:ns ## COG: yjhQ COG3153 # Protein_GI_number: 16132128 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli K12 # 1 172 1 172 181 333 94.0 8e-92 MTAHHFTFQITDESDASDIREVETRAFGFSKEADLTASLLEDESARPALSLLARHEGKAV GHILFTRATFKGEMDSPLMHILAPLAVIPEYQGMGVGGRLIRTGIEHLRLMGCQTVFVLG HATYYPRHGFEPCAGDKGYPAPYPIPEEHKACWMMQALTAQPMNVTGHIQCAQALMKPEH WRE >gi|299857051|gb|ADWS01000013.1| GENE 8 5744 - 6001 260 85 aa, chain - ## HITS:1 COG:STM4501 KEGG:ns NR:ns ## COG: STM4501 COG3811 # Protein_GI_number: 16767745 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 85 1 85 85 130 92.0 5e-31 MNLSRQEQRTLHVLAKGGRIAHVRDSSGRVTSVECYSREGLLLTDCTLAVFKKLKTKKLI KSVNGQPYRINTTGLNNVRAQLDNR >gi|299857051|gb|ADWS01000013.1| GENE 9 6356 - 6622 147 88 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_4909 NR:ns ## KEGG: ECUMN_4909 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 43 1 43 43 87 97.0 2e-16 MTQVLIGDIYLRQQCDVFWLGYTISPAYTRQGYAIEAITATIDWIKENGFSLIKAGVNPE NTLSKNYLSGLASIFRASKMGEHIYVLD >gi|299857051|gb|ADWS01000013.1| GENE 10 6844 - 7980 360 378 aa, chain + ## HITS:1 COG:yjhR KEGG:ns NR:ns ## COG: yjhR COG1112 # Protein_GI_number: 16132129 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Escherichia coli K12 # 41 378 1 338 338 678 97.0 0 MYLYEHRRCFNNIIGYCNSLCYHGKLQPKRGMEKGTIFPAMGYLHIDGRGMKPNGGSRYN PLEAETIAAWLVAHKDDIERHYGEPLYKVVGVVTPFSAQVNAIKTSLRKLEINGKDEQGS LTVGTVHSLQGAERAIVLFSPVYSKHEDGRFLDSNSSILNVAVSRAKDSFLVFGDMDLIE MQPTFSPRGLLAKYLFSSDNNALQFEFQKRQDLISAHTQISTLHGVEQHDGFLNKTLAGA QKKITIISPWLSWQKVEQTGFLASMALARSRGIDITVVTDKNCNIAHVDDDKRQEKQHLL NDAVEKLNKMGIATKLVNRVHSKIVIEDEELLCVGSFNWFSAAREDKYQRYDTSLVYRGE GVKNEIKAIYGSLDQRQL >gi|299857051|gb|ADWS01000013.1| GENE 11 8563 - 8949 120 128 aa, chain - ## HITS:1 COG:yjhS KEGG:ns NR:ns ## COG: yjhS COG2801 # Protein_GI_number: 16132130 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 128 199 326 326 260 94.0 5e-70 MVEAFRRDLKQFHSQLNNITAAPWFCGDTTWYWKENFPHAYEAIYGNYQNNVLANIIFVD FQQQGERGLTNAPDEDPDDLSTGYFGSAYRSAENWTTSLRSSHFSAAARRGIISDRFVEA ILQFWRER >gi|299857051|gb|ADWS01000013.1| GENE 12 9607 - 10713 637 368 aa, chain - ## HITS:1 COG:yjhT KEGG:ns NR:ns ## COG: yjhT COG3055 # Protein_GI_number: 16132131 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 368 37 404 404 701 98.0 0 MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAK DKKWTALAAFPGGPRDQATSAFIDGDLYVFGGIGKNSKGLTQVFNDVHKYNPKTNSWVKL MSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKA EDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFE LDFTGDNLKWNRLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGL KKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGESAGGKAVTDSVLISVK DNKVTVQN >gi|299857051|gb|ADWS01000013.1| GENE 13 10733 - 11449 406 238 aa, chain - ## HITS:1 COG:no KEGG:G2583_5112 NR:ns ## KEGG: G2583_5112 # Name: nanC # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 238 4 241 241 454 100.0 1e-126 MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESN TWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDAT KDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDY RYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL >gi|299857051|gb|ADWS01000013.1| GENE 14 12247 - 12642 73 131 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_4527 NR:ns ## KEGG: ECIAI1_4527 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 130 1 130 131 238 96.0 4e-62 MQLILSIYHVICSVTSKINIKNSAKFNIRSTSRLTYNIISQLHLPQNGYFMERSNFLVAI IKLILRSLAIIPGWFVSLGHEIVTFLFILEIWGNAGDAFSSTSVGKYGFGHYDLNPPQSQ LLAGRYGKQTN >gi|299857051|gb|ADWS01000013.1| GENE 15 12903 - 13505 28 200 aa, chain + ## HITS:1 COG:ECs5271 KEGG:ns NR:ns ## COG: ECs5271 COG0582 # Protein_GI_number: 15834525 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 200 1 200 200 402 100.0 1e-112 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN AGRFYGIWDRARGRQRHAVL >gi|299857051|gb|ADWS01000013.1| GENE 16 13983 - 14579 369 198 aa, chain + ## HITS:1 COG:fimE KEGG:ns NR:ns ## COG: fimE COG0582 # Protein_GI_number: 16132134 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 1 198 1 198 198 367 100.0 1e-102 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA GLWERNNLINEKLKREEV >gi|299857051|gb|ADWS01000013.1| GENE 17 15060 - 15608 471 182 aa, chain + ## HITS:1 COG:ECs5273 KEGG:ns NR:ns ## COG: ECs5273 COG3539 # Protein_GI_number: 15834527 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 222 95.0 3e-58 MKIKTLAIVVLSALSLSSTAALAAATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQV RTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSAT NVGVQILDRTGAALALDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQ YQ >gi|299857051|gb|ADWS01000013.1| GENE 18 15673 - 16212 335 179 aa, chain + ## HITS:1 COG:fimI KEGG:ns NR:ns ## COG: fimI COG3539 # Protein_GI_number: 16132136 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 179 37 215 215 369 99.0 1e-102 MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQIS SNRFHAVGEDSAPVPFVIHLQECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIG VALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ >gi|299857051|gb|ADWS01000013.1| GENE 19 16249 - 16974 417 241 aa, chain + ## HITS:1 COG:ECs5275 KEGG:ns NR:ns ## COG: ECs5275 COG3121 # Protein_GI_number: 15834529 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 # 1 241 1 241 241 455 98.0 1e-128 MSNKNVNVRKSQEITFCLLAGILIFMAMMVAGRAEAGVALGATRVIYPAGQKQVQLAVTN NDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKRENTLRILDATNNQLPQDRESLFW MNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLIN PTPYYLTVTELNAGARVLENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVM E >gi|299857051|gb|ADWS01000013.1| GENE 20 17041 - 19677 1448 878 aa, chain + ## HITS:1 COG:ECs5276 KEGG:ns NR:ns ## COG: ECs5276 COG3188 # Protein_GI_number: 15834530 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 878 1 878 878 1724 99.0 0 MSYLNLRLYQRNTQCLHIRKHRLAGFFVRLFVACAFAAQAPLSSAELYFNPRFLADDPQA VADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLN TASVSGMNLLADDACVPLTSMIHDATAHLDVGQQRLNLTIPQAFMSNRARGYIPPELWDP GINAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSK NKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGVQLASDDNMLPDSQRGFAPV IHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTV PYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRY RAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYR YSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRS STLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNI PFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGD GNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLAHANGVTLGQPLNDTVVL VKAPGAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVP TRGAIVRAEFKARVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLA GKVQVKWGEEENAHCIANYQLPPESQQQLLTQLSAECR >gi|299857051|gb|ADWS01000013.1| GENE 21 19687 - 20217 151 176 aa, chain + ## HITS:1 COG:ECs5277 KEGG:ns NR:ns ## COG: ECs5277 COG3539 # Protein_GI_number: 15834531 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 317 98.0 7e-87 MRNKPFYLLCAFLWLAVSRVLAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFN NIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNE QQNQIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ >gi|299857051|gb|ADWS01000013.1| GENE 22 20230 - 20733 269 167 aa, chain + ## HITS:1 COG:fimG KEGG:ns NR:ns ## COG: fimG COG3539 # Protein_GI_number: 16132140 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 167 1 167 167 255 100.0 3e-68 MKWCKRGYVLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMS AGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLN TGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS >gi|299857051|gb|ADWS01000013.1| GENE 23 20753 - 21655 509 300 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_4847 NR:ns ## KEGG: EcSMS35_4847 # Name: fimH # Def: protein FimH # Organism: E.coli_SECEC # Pathway: not_defined # 1 300 1 300 300 528 100.0 1e-149 MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVNLAPAVNVGQNLVVDLS TQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRT DKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTG GCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQ GVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ >gi|299857051|gb|ADWS01000013.1| GENE 24 21898 - 23241 1523 447 aa, chain - ## HITS:1 COG:ECs5280 KEGG:ns NR:ns ## COG: ECs5280 COG2610 # Protein_GI_number: 15834534 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 704 100.0 0 MHVLNILWVVFGIGLMLVLNLKFKINSMVALLVAALSVGMLAGMDLMSLLHTMKAGFGNT LGELAIIVVFGAVIGKLMVDSGAAHQIAHTLLARLGLRYVQLSVIIIGLIFGLAMFYEVA FIMLAPLVIVIAAEAKIPFLKLAIPAVAAATTAHSLFPPQPGPVALVNAYGADMGMVYIY GVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVDMNNLPSFGVSILVPLIPAIIMI STTIANIWLVKDTPAWEVVNFIGSSPIAMFIAMVVAFVLFGTARGHDMQWVMNAFESAVK SIAMVILIIGAGGVLKQTIIDTGIGDTIGMLMSHGNISPYIMAWLITVLIRLATGQGVVS AMTAAGIISAAILDPATGQLVGVNPALLVLATAAGSNTLTHINDASFWLFKGYFDLSVKD TLKTWGLLELVNSVVGLIIVLIISMVA >gi|299857051|gb|ADWS01000013.1| GENE 25 23581 - 24765 1487 394 aa, chain + ## HITS:1 COG:uxuA KEGG:ns NR:ns ## COG: uxuA COG1312 # Protein_GI_number: 16132143 # Func_class: G Carbohydrate transport and metabolism # Function: D-mannonate dehydratase # Organism: Escherichia coli K12 # 1 394 1 394 394 812 99.0 0 MEQTWRWYGPNDPVSLADVRQAGATGVVTALHHIPNGEVWSVEEILKRKAIVEDAGLVWS VVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCYNFMPVLDWTRTDLEYVLP DGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAVRFATMSDEDKARLTRNIIAG LPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKAIIPVAEEVGVRMAVHPDDPPRP ILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYGVRADNDLVDMIKQFGPRIYFTHLR STMREDNPKTFHEAAHLNGDVDMYEVVKAIVEEEHRRKAEGKEDLIPMRPDHGHQMLDDL KKKTNPGYSAIGRLKGLAEVRGVELAIQRAFFSR >gi|299857051|gb|ADWS01000013.1| GENE 26 24846 - 26306 1806 486 aa, chain + ## HITS:1 COG:ECs5282 KEGG:ns NR:ns ## COG: ECs5282 COG0246 # Protein_GI_number: 15834536 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 486 1 486 486 1016 100.0 0 MTTIVDSNLPVARPSWDHSRLESRIVHLGCGAFHRAHQALYTHHLLESTDSDWGICEVNL MPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALHPEIDGCEGILNAMARPQT AIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKSAIGYIVEALRLRREKGLKAF TVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENVTFPCTMVDRIVPAATPETLQEI ADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKVGAQFVADVVPFEMMKLRMLNGSHS FLAYLGYLGGYETIADTMTNPDYRKAAFALMMQEQAPTLSMPEGTDLNAYATLLIERFSN PSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQNGGSWRHLALGVAGWMRYTQGVDEQGNAI DVVDPMLAEFQKINAQYQGADRVKALLGLSGIFADDLPQNADFVGAVTAAYQQLCERGAR ECVAAL >gi|299857051|gb|ADWS01000013.1| GENE 27 26521 - 27294 895 257 aa, chain + ## HITS:1 COG:uxuR KEGG:ns NR:ns ## COG: uxuR COG2186 # Protein_GI_number: 16132145 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 257 1 257 257 498 100.0 1e-141 MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIK GLVEVRRGAGIYVLDNSGSQNTDSPDANVCNDAGPFELLQARQLLESNIAEFAALQATRE DIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATHNSMLVELFRQSWQWRENNPM WIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKLAMWQHLENVKQRLLEFSNVDDI YFDGYLFDSWPLDKVDA >gi|299857051|gb|ADWS01000013.1| GENE 28 27435 - 28265 329 276 aa, chain - ## HITS:1 COG:no KEGG:ECSE_4598 NR:ns ## KEGG: ECSE_4598 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 276 1 276 276 570 100.0 1e-161 MSMPLSNALQSQIITDNHFLHHPKVDNELTRKYERARLDTENIYLLPLARGNNHNYDGKS VVEIRKLDISKESWPFNYVTEACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAA TELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPVSQAKRWTN EQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYN VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK >gi|299857051|gb|ADWS01000013.1| GENE 29 28938 - 29330 210 130 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4992 NR:ns ## KEGG: EC55989_4992 # Name: iraD # Def: DNA replication/recombination/repair protein # Organism: E.coli_55989 # Pathway: not_defined # 1 130 1 130 130 252 100.0 2e-66 MMRQSLQAVLPEISGNKTSPLRKSVCSDLLTLFNSPHSALPSLLVSGMPEWQVHNPSDKH LQSWYCRQLRSALLFHEPRIAALQVNLKEAYCHTLAISLEIMLYHDDESLTFDLVWDNGG WRSATLENVS >gi|299857051|gb|ADWS01000013.1| GENE 30 29323 - 30234 720 303 aa, chain - ## HITS:1 COG:yjiE KEGG:ns NR:ns ## COG: yjiE COG0583 # Protein_GI_number: 16132148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 303 1 303 303 598 99.0 1e-171 MDDCGAVLHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS DEHREALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD GCGIAWLPEYAIQQEIRSGQLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI VLS >gi|299857051|gb|ADWS01000013.1| GENE 31 30299 - 31471 1219 390 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4994 NR:ns ## KEGG: EC55989_4994 # Name: iadA # Def: isoaspartyl dipeptidase (EC:3.4.19.5) # Organism: E.coli_55989 # Pathway: not_defined # 1 390 1 390 390 758 99.0 0 MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPPDIVPDCTVVDLSGQIL CPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKT RALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIGVKCAISDHRSAAPDVYHLAN MAAESRVGGLLGGKPGVTVFHMGDSKKALQPVYDLLENCDVPISKLLPTHVNRNVPLFEQ ALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLT HIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNLSGKGEILPGNDADLLVMT PELRIEQVYARGKLMVKDGKACVKGTFETA >gi|299857051|gb|ADWS01000013.1| GENE 32 31484 - 31945 528 153 aa, chain - ## HITS:1 COG:ECs5287 KEGG:ns NR:ns ## COG: ECs5287 COG0700 # Protein_GI_number: 15834541 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 261 100.0 4e-70 MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKITGLLDWVGHICEPVMA LWGLPGEAATVLLAALMSMGGAVGVAASLATAGALTGHDVTVLLPAMYLMGNPVQNVGRC LGTAEVNAKYYPHIITVCVINALLSIWVMQLIV >gi|299857051|gb|ADWS01000013.1| GENE 33 31942 - 32289 284 115 aa, chain - ## HITS:1 COG:ECs5288 KEGG:ns NR:ns ## COG: ECs5288 COG3314 # Protein_GI_number: 15834542 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 115 117 231 231 214 100.0 2e-56 MTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAI ITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA >gi|299857051|gb|ADWS01000013.1| GENE 34 32486 - 32635 94 49 aa, chain - ## HITS:1 COG:ECs5288 KEGG:ns NR:ns ## COG: ECs5288 COG3314 # Protein_GI_number: 15834542 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 40 1 40 231 68 92.0 4e-12 MGIVMTQQGDAVAGELATEKVGIKGYLAFFLTIIFFPVFFRNRQLVARF >gi|299857051|gb|ADWS01000013.1| GENE 35 32873 - 33427 352 184 aa, chain + ## HITS:1 COG:kptA KEGG:ns NR:ns ## COG: kptA COG1859 # Protein_GI_number: 16132152 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNA:NAD 2'-phosphotransferase # Organism: Escherichia coli K12 # 1 184 35 218 218 365 99.0 1e-101 MAKYNEKELADTSKFLSFVLRHKPEAIGIVLDREGWADIDKLILCAQKAGKRLTRALLDT VVATSDKKRFSYSSDGRCIRAVQGHSTSQVAISFAEKTPPQFLYHGTASRFLDEIKKQGL IAGERHYVHLSADEATARKVGARHGSPVILTVKAQEMAKRGIPFWQAENGVWLTSTVAVE FLEW >gi|299857051|gb|ADWS01000013.1| GENE 36 33440 - 34618 826 392 aa, chain - ## HITS:1 COG:yjiJ KEGG:ns NR:ns ## COG: yjiJ COG0477 # Protein_GI_number: 16132153 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 392 1 392 392 580 96.0 1e-165 MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNY AGYLAGSLLFSFGAFHQPSRLRPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASA GMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLAGLHFAFSSQTLWQGAGALSG MMLIALTLLMPSKKHAIAPMPLAKTEQQIMNWWLLAILYGLAGFGYIIVATFLPLMAKDA GSPLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLL IISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTS ALAGATLCGAAALFIAALISTVQLFKLQVVTS >gi|299857051|gb|ADWS01000013.1| GENE 37 34686 - 35546 538 286 aa, chain - ## HITS:1 COG:yjiK KEGG:ns NR:ns ## COG: yjiK COG3204 # Protein_GI_number: 16132154 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 286 38 323 323 553 98.0 1e-157 MTKSISLSKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNI SSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDER DYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV NGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGE ISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNRFYRFTPKSSH >gi|299857051|gb|ADWS01000013.1| GENE 38 35611 - 35868 172 85 aa, chain - ## HITS:1 COG:no KEGG:EC55989_5000 NR:ns ## KEGG: EC55989_5000 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 85 1 85 85 176 100.0 2e-43 MKEFLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLCIWLTCPPGEEIQWVIP GLTESIYCQQDGVWRCIAHYRVSPR >gi|299857051|gb|ADWS01000013.1| GENE 39 35865 - 36632 449 255 aa, chain - ## HITS:1 COG:ECs5297 KEGG:ns NR:ns ## COG: ECs5297 COG1924 # Protein_GI_number: 15834551 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 486 98.0 1e-137 MTYSIGIDSGSTATKGILLADGVITRRFLVPTPFRPATAITEAWETLREGLETTPFLTLT GYGRQLVDFADKQVTEISCHGLGARFLAPATRAVIDIGGQDSKVIQLDDDGNLCDFLMND KCAAGTGRFLEVISRTLGTSVEQLDSITENVTPHAITSMCTVFAESEVISLRSAGVAPEA ILAGVINAMARRSANFIARLSCEAPILFTGGVSHCQTFARMLESHLGMPVNTHPDAQFAG AIGAAVIGQRVRTRR >gi|299857051|gb|ADWS01000013.1| GENE 40 36642 - 37793 1337 383 aa, chain - ## HITS:1 COG:yjiM KEGG:ns NR:ns ## COG: yjiM COG1775 # Protein_GI_number: 16132156 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Escherichia coli K12 # 1 383 8 390 390 790 99.0 0 MSLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCS TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE FKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHEISEDALRDAIALKNRERRAL ANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLDPRP RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAI GCSCVSPNDQRLQMLSQMVEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAI ETDYSTSDVGQLSTRVAAFIEML >gi|299857051|gb|ADWS01000013.1| GENE 41 37909 - 39189 1021 426 aa, chain - ## HITS:1 COG:yjiN KEGG:ns NR:ns ## COG: yjiN COG2733 # Protein_GI_number: 16132157 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 426 1 426 426 790 99.0 0 MNKLIELRRAKMLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVA LFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFS QPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKND RHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSD AVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLS ELWGDLREWLKADINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPE FSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPAL FPLSNF >gi|299857051|gb|ADWS01000013.1| GENE 42 39230 - 40462 1203 410 aa, chain - ## HITS:1 COG:ECs5300 KEGG:ns NR:ns ## COG: ECs5300 COG0477 # Protein_GI_number: 15834554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 711 99.0 0 MPRFFARHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFNADVSLAPAAVSLYLAG GMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMTQFLIARAIQGTSICFIAT VGYVTVQEAFGQTKGIKLMAIITSIVLIAPIIGPLSGAALMHFVHWKVLFAIIAVMGFIS FVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFCNRLFLFGAATISLSYIPMMSWVAVSPV ILIDAGGLTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPLQLVGLALLII GNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMSVS VEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLAGLLNRVRQHQAAELAEER >gi|299857051|gb|ADWS01000013.1| GENE 43 40929 - 41885 567 318 aa, chain + ## HITS:1 COG:ECs5301 KEGG:ns NR:ns ## COG: ECs5301 COG5464 # Protein_GI_number: 15834555 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 254 1 254 260 489 96.0 1e-138 MTNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRAL HSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIP MLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDVTVVPDDEIVQHRRVALLELI QKHIRQRDLMGLIDQLVILLVTECANDSQITALLNYILLTGDEARFKKFISELTRRMPQH RERIMTIAERIYNDGWLLGRERGRKEGKVEGERSLLRLLLQNGADPEWIQRYTGLSAEQM QALDQPLPESKREPWIEY >gi|299857051|gb|ADWS01000013.1| GENE 44 42128 - 43540 1089 470 aa, chain - ## HITS:1 COG:yjiR KEGG:ns NR:ns ## COG: yjiR COG1167 # Protein_GI_number: 16132161 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli K12 # 1 470 1 470 470 947 98.0 0 MTRYQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGISISTVQQAYQTLETMKFITPQP RSGYFVAQRKAQPPVPPMTRPVQRPVEITQWDQVLDMLEAHSDNSIVPLSKSTPDVETPS LKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLMLDSGSVVTADDIIITSGCHNS MSLALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALELALEQWP IKGIILVPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWD IDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQMAAATFVLEGH YHRHIRRMRQTYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDMVCVARQLY RMKIQVAAGSIFSASGKYRNCLRINCALPLSETYREALKQIGDAVYRAME >gi|299857051|gb|ADWS01000013.1| GENE 45 43717 - 43881 98 54 aa, chain + ## HITS:1 COG:ECs5303 KEGG:ns NR:ns ## COG: ECs5303 COG5457 # Protein_GI_number: 15834557 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Escherichia coli O157:H7 # 1 54 1 54 54 66 100.0 1e-11 MEFHENKAKTPFIRLVQLWQAVRRWRRQMQARRVLQQMSDERLRDIGLRREDVE >gi|299857051|gb|ADWS01000013.1| GENE 46 44251 - 46773 1696 840 aa, chain + ## HITS:1 COG:all3924 KEGG:ns NR:ns ## COG: all3924 COG2366 # Protein_GI_number: 17231416 # Func_class: R General function prediction only # Function: Protein related to penicillin acylase # Organism: Nostoc sp. PCC 7120 # 25 655 59 672 847 205 28.0 3e-52 MIVNCVTASLMYYWSLPALAEQSSSEIKIVRDEYGMPHIYANDTWHLFYGYGYVVAQDRL FQMEMARRSTQGTVAEVLGKDFVKFDKDIRRNYWPDAIRAQIAALSPEDMSILQGYADGM NAWIDKVNTNPETLLPKQFNTFGFTPKRWEPFDVAMIFVGTMANRFSDSTSEIDNLALLT ALKDKYGVSQGMAVFNQLKWLVNPSAPTTIAVQESSYPLKFNQQNSQTAALLPRYDLPAP MLDRPAKGADGALLALTAGKNRETIAAQFAQGGANGLAGYPTTSNMWVIGKSKAQDAKAI MVNGPQFGWYAPAYTYGIGLHGAGYDVTGNTPFAYPGLVFGHNGVISWGSTAGFGDDVDI FAERLSAEKPGYYLHNGKWVKMLSREETITVKNGQAETFTVWRTVHGNILQTDQTTQTAY AKSRAWDGKEVASLLAWTHQMKAKNWQEWTQQAAKQALTINWYYADVNGNIGYVHTGAYP DRQSGHDPRLPVPGTGKWDWKGLLPFEMNPKVYNPLSGYIANWNNSPQNDYPASDLFAFL WGGADRVTEIDRLLEQKPRLTADQAWDVIRQTSRQDLNLRLFLPTLQAATSGLTQSDPRR QLVDTLTRWDGINLLNDDGKTWQQPGSAILNVWLTSMLKRTVVAAVPMPFDKWYSASGYE TTQDGPTGSLNISVGAKILYEAVQGDKSPIPQAVDLFAGKPQQEVVLAALEDTWETLSKR YGNNVSNWKTPAMALTFRANNFFGVPQAAAEETRHQAEYQNRGTENDMIVFSPTTSDRPV LAWDVVAPGQSGFIAPDGTVDKHYEDQLKMYENFGRKSLWLTKQDVEAHKESQEVLHVQR >gi|299857051|gb|ADWS01000013.1| GENE 47 46851 - 47807 1025 318 aa, chain - ## HITS:1 COG:STM4530 KEGG:ns NR:ns ## COG: STM4530 COG0523 # Protein_GI_number: 16767774 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Salmonella typhimurium LT2 # 1 318 1 318 318 586 91.0 1e-167 MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTL TNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQR YLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVAGEAEKLRERLARINARA PVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIADKQNDISSIVVELDYPVDISEV SRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGVQRLYSADWDRPWGDEKPHSTMVFI GIQLPEDEIRAAFAGLKK >gi|299857051|gb|ADWS01000013.1| GENE 48 47818 - 48021 272 67 aa, chain - ## HITS:1 COG:ECs5312 KEGG:ns NR:ns ## COG: ECs5312 COG2879 # Protein_GI_number: 15834566 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli O157:H7 # 1 67 1 67 67 127 100.0 4e-30 MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDG KGGMRCC >gi|299857051|gb|ADWS01000013.1| GENE 49 48071 - 50236 2590 721 aa, chain - ## HITS:1 COG:ECs5313 KEGG:ns NR:ns ## COG: ECs5313 COG1966 # Protein_GI_number: 15834567 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 721 1 721 721 1349 100.0 0 MPGFTMDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASVSVYLVAYRYYS LYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGY LPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPVPGTIALFGCFLIMII ILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPGRVGEVSVIGIVLLVASI YFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVG LALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFITIACGAVSGFHALISSGTTPKL LANETDARFIGYGAMLMESFVAIMALVAASIIEPGLYFAMNTPPAGLGITMPNLHEMGGE NAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAH VFHKVLPMADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFIPFLKKTDSLVA GIIGTAGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLIKMKRTQ YIWVTVVPAVWLLICTTWALGLKLFSTNPQMEGFFYMASQYKEKIANGTDLTAQQIANMN HIVVNNYTNAGLSILFLIVVYSIIFYGFKTWLAVRNSDKRTDKETPYVPIPEGGVKISSH H >gi|299857051|gb|ADWS01000013.1| GENE 50 50614 - 51126 623 170 aa, chain - ## HITS:1 COG:STM1098 KEGG:ns NR:ns ## COG: STM1098 COG1853 # Protein_GI_number: 16764456 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Salmonella typhimurium LT2 # 1 170 1 170 170 300 84.0 1e-81 MQLDEQRLRFRDAMASLSAAVNIITTEGDAGQCGITATAVCSVTDTPPSLMVCINANSAM NPVFQGNGKLCVNVLNHEQELMARHFAGMTGMAMEERFSLSCWQKGPLAQPVLKGSLASL EGEIRDVQAIGTHLVYLVEIKNIILSAEGHGLIYFKRRFHPVMLEMEAAI >gi|299857051|gb|ADWS01000013.1| GENE 51 51144 - 52706 1747 520 aa, chain - ## HITS:1 COG:STM1099 KEGG:ns NR:ns ## COG: STM1099 COG2368 # Protein_GI_number: 16764457 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Aromatic ring hydroxylase # Organism: Salmonella typhimurium LT2 # 1 520 1 520 520 1061 95.0 0 MKPEDFRASTQRPFTGEEYLKSLQDGREIYIYGERVKDVTTHPAFRNAAASVAQLYDALH KPEMQDSLCWNTDTGSGGYTHKFFRVAKSADDLRQQRDAIAEWSRLSYGWMGRTPDYKAA FGCALGANPGFYGQFEQNARNWYTRIQETGLYFNHAIVNPPIDRHLPTDKVKDVYIKLEK ETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENPDFALMFVAPMDADGVKLISRAS YEMVAGATGSPYDYPLSSRFDENDAILVMDNVLIPWENVLIYRDFDRCRRWTMEGGFARM YPLQACVRLAVKLDFITALLKKSLECTGTLEFRGVQADLGEVVAWRNTFWALSDSMCSEA TPWVNGAYLPDHAALQTYRVLAPMAYAKIKNIIERNVTSGLIYLPSSARDLNNPQIDQYL AKYVRGSNGMDHVQRIKILKLMWDAIGSEFGGRHELYEINYSGSQDEIRLQCLRQAQSSG NMDKMMAMVDRCLSEYDQNGWTVPHLHNNDDINMLDKLLK >gi|299857051|gb|ADWS01000013.1| GENE 52 52957 - 53847 704 296 aa, chain - ## HITS:1 COG:STM1108 KEGG:ns NR:ns ## COG: STM1108 COG2207 # Protein_GI_number: 16764466 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 294 1 294 298 535 87.0 1e-152 MCDRQIANIDISKEYDESLGTDDVHYQSFARMAAFFGRHMLPHRHEQYFQMHFLNSGQIE LQLDDHRYSVEAPLFVLTPPSVPHAFITESDADGHVLTVREDLIWPLLEVLYPGTRETFG LPGICLSLADKPDELAALEHYWQLIERESVEQLPGREHTLTLLAQAVFTLLLRNAKLDDH AASGMRGELKLFQRFHMLIESHFHQHWTVPDYANELHITESRLTDICRRFANRPPKRLIF DRQLREAKRLLLFSDNAVNNIAWQLGFKDPAYFARFFNRLVGCSPSAYRAKKVPVT >gi|299857051|gb|ADWS01000013.1| GENE 53 53857 - 55233 1353 458 aa, chain - ## HITS:1 COG:STM1107 KEGG:ns NR:ns ## COG: STM1107 COG0477 # Protein_GI_number: 16764465 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 458 1 458 458 771 87.0 0 MSDTSPAIPESIDPANQHKALTAGQQAVIKKLFRRLIVFLFVLFIFSFLDRINIGFAGLT MGRDLGLSATMFGLATTLFYAAYVIFGIPSNIMLSIVGARRWIATIMVLWGIASTATMFA TGPTSLYVLRILVGITEAGFLPGILLYLTFWFPAYFRARANALFMVAMPVTTALGSIVSG YILSLDGVMALKGWQWLFLLEGFPSVLLGVMVWFWLDDSPDKAKWLTKEDKKCLQEMMDN DRLTLVQPEGAISHHAMQQRSMWREIFTPVVMMYTLAYFCLTNTLSAISIWTPQILQSFN QGSSNITIGLLAAVPQICTILGMVYWSRHSDRRQERRHHTALPYLFAAAGWLLASATDHN MIQMLGIIMASTGSFSAMAIFWTTPDQSISLRARAIGIAVINATGNIGSALSPFMIGWLK DLTGSFNSGLWFVAALLVIGAGIIWAIPMQSSRPRATP >gi|299857051|gb|ADWS01000013.1| GENE 54 55408 - 56196 1120 262 aa, chain - ## HITS:1 COG:STM1106 KEGG:ns NR:ns ## COG: STM1106 COG3836 # Protein_GI_number: 16764464 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Salmonella typhimurium LT2 # 1 253 1 253 263 429 89.0 1e-120 MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAI APYPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGS ALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLSADM GYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIANEQLAKRYLELGALFVAVGVDTTLLA RAAEALAARFGAQATAVKPGVY >gi|299857051|gb|ADWS01000013.1| GENE 55 56207 - 57010 972 267 aa, chain - ## HITS:1 COG:STM1105 KEGG:ns NR:ns ## COG: STM1105 COG3971 # Protein_GI_number: 16764463 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase # Organism: Salmonella typhimurium LT2 # 1 267 1 267 267 533 95.0 1e-151 MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQREWVRLKIAEGRTLKGH KIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIVPRIEVELAFVLAKPLRGP NCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKP DELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEAGQIILGGSF TRPVPARKGDTFHVDYGNMGSISCRFV >gi|299857051|gb|ADWS01000013.1| GENE 56 57078 - 57458 411 126 aa, chain - ## HITS:1 COG:STM1104 KEGG:ns NR:ns ## COG: STM1104 COG3232 # Protein_GI_number: 16764462 # Func_class: E Amino acid transport and metabolism # Function: 5-carboxymethyl-2-hydroxymuconate isomerase # Organism: Salmonella typhimurium LT2 # 1 126 1 126 126 231 87.0 3e-61 MPHFIVECTENIREEARLPELFASVNTALAATGIFPLGGIRSRAHWIDTWQMADGKHDYA FVHMTLKIGSGRSLESRQEVGEMLFDLIKTHFASLMESRYLALSFEIAELHPTLNFKQNN VHALFK >gi|299857051|gb|ADWS01000013.1| GENE 57 57468 - 58319 857 283 aa, chain - ## HITS:1 COG:STM1103 KEGG:ns NR:ns ## COG: STM1103 COG3384 # Protein_GI_number: 16764461 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 283 1 283 283 572 93.0 1e-163 MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCREMGVDTIIVFDTHWLV NSAYHINCADHFEGVYTSNELPHFIRDMTYNYEGNPELGQLIADEALKLGVRAKAHNIPS LKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSRKLGEAILKAIEQYDGTVAVLAS GSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWREGQFKEFCNMLPEYADYCYGEGN MHDTVMLLGMLGWDKYDGKVEFITELFPSSGTGQVNAVFPLPA >gi|299857051|gb|ADWS01000013.1| GENE 58 58321 - 59787 1637 488 aa, chain - ## HITS:1 COG:STM1102 KEGG:ns NR:ns ## COG: STM1102 COG1012 # Protein_GI_number: 16764460 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 488 1 488 488 991 98.0 0 MKKVNHWINGKNVAGNDYFQTTNPATGEVLADVASGGEAEINQAVAAAKEAFPKWANLPM KERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIPRASHNFEFFAEVCQQMNG KTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAPCLALGNTAVLKMSELSPLTA DRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVRAVSFTGGTATGRNIMKNAGLKK YSMELGGKSPVLIFEDADIERALDAALFTIFSINGERCTAGSRIFIQQSIYPEFVKRFAE RANRLRVGDPNDPNTQVGALISQQHWEKVSGYIRLGIEEGATLLAGGPDKPSDLPAHLKG GNFLRPTVLADVDNRMRVAQEEIFGPVACLLPFKDEAEGLRLANDVEYGLASYIWTQDVS KVLRLARGIEAGMVFVNTQNVRDLRQPFGGVKASGTGREGGEYSFEVFAEMKNVCISMGD HPIPKWGV >gi|299857051|gb|ADWS01000013.1| GENE 59 59784 - 61073 1223 429 aa, chain - ## HITS:1 COG:STM1101 KEGG:ns NR:ns ## COG: STM1101 COG0179 # Protein_GI_number: 16764459 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Salmonella typhimurium LT2 # 1 429 1 429 429 675 83.0 0 MKGTIFAVALNHRSQLDAWQEAFQQSPYKAPPKTAVWFIKPRNTVIGCGEPIPFPQGEKV LSGATVALIVGKTATKVREEDAAEYIAGYALANDVSLPEESFYRPAIKAKCRDGFCPIGE TVALSNVDNLTIYTEINGRPADHWNTADLQRNAAQLLSALSEFATLNPGDAILLGTPQAR VEIQPGDRVRVLAEGFPPLENPVVDEREVTTRKSFPTQPHPHGTLFALGLNYADHASELE FKPPEEPLVFLKAPNTLTGDNQTSVRPNNIEYMHYEAELVVVIGKQARSVSEADAMDYVA GYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPMLSTIVPKEAIPDPHNLTLRTFVNGELR QQGTTADLIFSVPFLIAYLSEFMTLNPGDMIATGTPKGLSDVVPGDEVVVEVEGVGRLVN RIVSEDTAK >gi|299857051|gb|ADWS01000013.1| GENE 60 61345 - 61791 389 148 aa, chain + ## HITS:1 COG:STM1100 KEGG:ns NR:ns ## COG: STM1100 COG1846 # Protein_GI_number: 16764458 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 124 1 124 146 199 83.0 1e-51 MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESPSMDFHDLAYRACILRP SLTGILTRMERDGLVLRLKPINDQRKLYISLTKEGQALYNRAQTQIEEAYRQIEAQFTAE KMQQLTHLLEEFIALGNSRQEAIPGDNE >gi|299857051|gb|ADWS01000013.1| GENE 61 61910 - 63574 1666 554 aa, chain + ## HITS:1 COG:ECs5315 KEGG:ns NR:ns ## COG: ECs5315 COG0840 # Protein_GI_number: 15834569 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 # 1 554 1 554 554 901 100.0 0 MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQTIRQQQSTLNGSWVAL LQTRNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAEKNWADYEALPRDPRQSTA AAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQDGFEKQYVAYMEQNDRLYDI AVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASLVAPMNRLIDSIRHIAGGDLVKP IEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANAIYSGASEIATGNNDLSSRTEQQAA SLEETAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDISTSSQK IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSL IEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEM DRVTQQNAALVEESAAAAAALEEQASRLTEAVAVFRIQQQQQQQRETSAVVKTVTPATPR KMAVADSGENWETF >gi|299857051|gb|ADWS01000013.1| GENE 62 63623 - 64984 1191 453 aa, chain - ## HITS:1 COG:yjiZ KEGG:ns NR:ns ## COG: yjiZ COG0477 # Protein_GI_number: 16132177 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 453 1 453 453 880 99.0 0 MEKENITLDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAMLLLFFAAVINYLDRSS LSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLDRKGPRLMLGLGMFFWSLF QAMSGMVHNFTQFVLVRIGMGIGEAPMNPCGVKVINDWFNIKERGRPMGFFNAASTIGVA VSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNA RRDPLSFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAA IPFLFGAAGMLVNGYVTDWLVKGGMAPIKSRKICIIAGMFCSAAFTLVVPQATTSMTAVL LIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHS FRLALIICGCVTAAGALAYIFLVRQPINDPRKD >gi|299857051|gb|ADWS01000013.1| GENE 63 65199 - 66113 379 304 aa, chain - ## HITS:1 COG:ECs5317 KEGG:ns NR:ns ## COG: ECs5317 COG1802 # Protein_GI_number: 15834571 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 37 304 1 268 268 516 100.0 1e-146 MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTTVRHILSHLRECGVLTQ VGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMINQRQLRPGETFSELQLARAAG VSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQLFELREMLETHSLQHFLNLPD HDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHSLLLSAADNIFFDQSLEIISVIF HFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLDATLALRNHLNSAKQSMIRSINENT RYAH >gi|299857051|gb|ADWS01000013.1| GENE 64 66252 - 67274 1022 340 aa, chain + ## HITS:1 COG:yjjN KEGG:ns NR:ns ## COG: yjjN COG1063 # Protein_GI_number: 16132179 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 340 6 345 345 673 99.0 0 MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVL GHEICGEIVGLGKNIADLKNGQQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQDGGF SEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAIAPGEQVLVVGAGPIGLGAAA IAKADGAQVVVADTSPARREHVATRLELPVLDPSAEDFDAQLRAQFGGSLAQKVIDATGN QHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKVGRLMA EGKITADMMLTHRYPFATLAETYERDVINNRELIKGVITF >gi|299857051|gb|ADWS01000013.1| GENE 65 67413 - 69704 2146 763 aa, chain - ## HITS:1 COG:mdoB KEGG:ns NR:ns ## COG: mdoB COG1368 # Protein_GI_number: 16132180 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Escherichia coli K12 # 14 763 1 750 750 1517 99.0 0 MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNITLFASDYFTGDGINDAV LYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRRRRHHPHHFGYSLLALLLALG SVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDPKLNLVYIYGESLERTYFDNE AFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFF PQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRND WGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFDGKPNQS FSAVSCSQENIAAFINKIKASPWFKDTVIVVSSDHLAMNNTAWKYLNKQDRNNLFFVIRG DKPQQETLAVKRNTMDNGATVLDILGGDNYLGLGRSSLSGQSMSEIFLNIKEKTLAWKPD IIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLA DFAPRDNFVWVDRCYKMAQLWAPELALSTDWCVSQGQLGGQQIVQHVDKTMWKGKTAFKD TVIDMARYKSNVDTLKIVDNDIRYKADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQL GDEVKIEYKHPLPKKFDLVITAKAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNP TDADTLVIVPPEPVSTNEGNILGHSPRKLGIGMVEIKVVEREG >gi|299857051|gb|ADWS01000013.1| GENE 66 69958 - 70449 486 163 aa, chain - ## HITS:1 COG:no KEGG:S4661 NR:ns ## KEGG: S4661 # Name: yjjA # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 163 3 165 165 264 99.0 1e-69 MKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNLLS SGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLEKLGLNSEEQKEDTNYLDGI QGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGLNFIS >gi|299857051|gb|ADWS01000013.1| GENE 67 70501 - 71238 786 245 aa, chain - ## HITS:1 COG:ECs5321 KEGG:ns NR:ns ## COG: ECs5321 COG1484 # Protein_GI_number: 15834575 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 473 100.0 1e-133 MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAALERENRAMKMQRTFNRS GIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAIC NELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDLSNVDLLVIDEIGVQTESKYE KVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVMDRMRLGNSLWVIFNWDSYRSRV TGKEY >gi|299857051|gb|ADWS01000013.1| GENE 68 71241 - 71780 551 179 aa, chain - ## HITS:1 COG:ECs1768 KEGG:ns NR:ns ## COG: ECs1768 COG5529 # Protein_GI_number: 15831022 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Escherichia coli O157:H7 # 78 153 184 266 346 77 51.0 1e-14 MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKL ARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEE LASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPKRDVNTVSEPDSQIPPGFRG >gi|299857051|gb|ADWS01000013.1| GENE 69 71887 - 72360 444 157 aa, chain - ## HITS:1 COG:STM4545 KEGG:ns NR:ns ## COG: STM4545 COG3610 # Protein_GI_number: 16767789 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 244 88.0 4e-65 MGVIEFLLALAQDMILAAIPAVGFAMVFNVPVRALRWCALLGAIGHGSRMILMTSGLNIE WSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISAYTAMISAVKISQLGYSEP LMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV >gi|299857051|gb|ADWS01000013.1| GENE 70 72351 - 73175 361 274 aa, chain - ## HITS:1 COG:yjjP KEGG:ns NR:ns ## COG: yjjP COG2966 # Protein_GI_number: 16132185 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 274 4 277 277 542 99.0 1e-154 MDSHYLNNTQHVYDKGRVMQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALG MDSVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGV EKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAVITFFASTAAMYIRQLLAQRH LHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFKGHI NTGLARWAIASLLTLATCVGVVMALTIWGLRGWV >gi|299857051|gb|ADWS01000013.1| GENE 71 73791 - 74465 327 224 aa, chain + ## HITS:1 COG:ECs5325 KEGG:ns NR:ns ## COG: ECs5325 COG2197 # Protein_GI_number: 15834579 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 224 18 241 241 421 99.0 1e-118 MQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLI SQYREIHWVFMVLRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLT SPAMNETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLA IHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS >gi|299857051|gb|ADWS01000013.1| GENE 72 74477 - 75100 301 207 aa, chain + ## HITS:1 COG:ECs5326 KEGG:ns NR:ns ## COG: ECs5326 COG2197 # Protein_GI_number: 15834580 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 207 19 225 225 395 99.0 1e-110 MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS SDAGLLEAADILLCMRHCEASNVLHPY >gi|299857051|gb|ADWS01000013.1| GENE 73 75138 - 75926 596 262 aa, chain - ## HITS:1 COG:ECs5327 KEGG:ns NR:ns ## COG: ECs5327 COG4114 # Protein_GI_number: 15834581 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 518 98.0 1e-147 MAYRSAPLYEDVIWRTHLQPQDAGLAQAVRATIAEHREHLLEFIRLDEPAPLNAMTLAQW SSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGLMVPPLMLALLTQEKALDV SPEHFHAEFHETGRAACFWVDVCEDKNATPHSPQQRMERLISQALVPVVQALEATGEING KLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEKTLTTGEDNPLWRTVVLRDGLLV RRTCCQRYRLPDVQQCGDCTLK >gi|299857051|gb|ADWS01000013.1| GENE 74 76067 - 76303 207 78 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C5074 NR:ns ## KEGG: UTI89_C5074 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 78 38 115 115 123 100.0 2e-27 MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTPVMLYHKQLRHYVLLPS CLALIAGIMLMIMNLNQG >gi|299857051|gb|ADWS01000013.1| GENE 75 76932 - 77963 264 343 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 78 334 106 368 371 106 30 6e-22 MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMG DNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRS AEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWGEYSVDGLTVKTLPGVFSRDG LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL AANCVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR IVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAIMTRQAKKG >gi|299857051|gb|ADWS01000013.1| GENE 76 78066 - 78479 325 137 aa, chain + ## HITS:1 COG:holD KEGG:ns NR:ns ## COG: holD COG3050 # Protein_GI_number: 16132190 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, psi subunit # Organism: Escherichia coli K12 # 1 137 1 137 137 253 99.0 1e-67 MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRA LTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAA LWQQICTYEHDFFPRND >gi|299857051|gb|ADWS01000013.1| GENE 77 78448 - 78894 753 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804944|ref|NP_290986.1| ribosomal-protein-alanine N-acetyltransferase [Escherichia coli O157:H7 EDL933] # 1 148 1 148 148 294 100 1e-78 MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVV LDEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGF NEATIRRNYYPTTDGREDAIIMALPISM >gi|299857051|gb|ADWS01000013.1| GENE 78 78909 - 79586 680 225 aa, chain + ## HITS:1 COG:ECs5332 KEGG:ns NR:ns ## COG: ECs5332 COG1011 # Protein_GI_number: 15834586 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 462 98.0 1e-130 MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITS LQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGF SALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAES DILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH >gi|299857051|gb|ADWS01000013.1| GENE 79 79677 - 81266 1939 529 aa, chain + ## HITS:1 COG:ECs5333 KEGG:ns NR:ns ## COG: ECs5333 COG4108 # Protein_GI_number: 15834587 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Escherichia coli O157:H7 # 1 529 1 529 529 1087 99.0 0 MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWM EMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVE DRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFK GVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNE FDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFV FKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAY PGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLS EEGAVQVFRPISNNDLIVGAVGVLQFDVVVSRLKSEYNVEAVYESVNVATARWVECADAK KFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH >gi|299857051|gb|ADWS01000013.1| GENE 80 81659 - 82264 670 201 aa, chain + ## HITS:1 COG:ECs5334 KEGG:ns NR:ns ## COG: ECs5334 COG2823 # Protein_GI_number: 15834588 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 262 98.0 3e-70 MTMTRLKISKTLLAVMLTSAVATGAAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAIT AKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQTQAEEAVKVAKGVEGVTSVSDKLH VRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDR AESIAKAVDGVKSVKNDLKTK >gi|299857051|gb|ADWS01000013.1| GENE 81 82391 - 82552 171 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|157368899|ref|YP_001476888.1| ## NR: gi|157368899|ref|YP_001476888.1| hypothetical protein Spro_0654 [Serratia proteamaculans 568] # 1 53 33 85 85 77 92.0 4e-13 MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFMGRKRP >gi|299857051|gb|ADWS01000013.1| GENE 82 82674 - 83747 781 357 aa, chain + ## HITS:1 COG:ECs5335 KEGG:ns NR:ns ## COG: ECs5335 COG4667 # Protein_GI_number: 15834589 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Escherichia coli O157:H7 # 1 357 1 357 357 731 100.0 0 MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGT SAGAQNLSAYICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQ MDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGIN YLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ HHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLAT VGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA >gi|299857051|gb|ADWS01000013.1| GENE 83 83744 - 84526 776 260 aa, chain + ## HITS:1 COG:yjjVm KEGG:ns NR:ns ## COG: yjjVm COG0084 # Protein_GI_number: 16132266 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli K12 # 1 258 1 258 259 489 94.0 1e-138 MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAEKYQPLY AALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQL KLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFSGSLQQAERFVQLGYKIGVGG TITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGKPNRPEQAARVFDVLCELRPEP EDEIAEVLLNNTYAVFSVRG >gi|299857051|gb|ADWS01000013.1| GENE 84 84639 - 85373 562 244 aa, chain - ## HITS:1 COG:yjjW KEGG:ns NR:ns ## COG: yjjW COG1180 # Protein_GI_number: 16132196 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 1 244 44 287 287 481 95.0 1e-136 MGRCNDCGECVPQCPHQALQIVDGNVLWNAVVCEQCDTCLKMCPQHATPMAQSMSVDEVL SHIRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETGWEK LLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSICLLAERGKLAELRLLVIPDQVDYLH HIDELATFIKRLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRGVSRLIFP ALYL >gi|299857051|gb|ADWS01000013.1| GENE 85 85474 - 87024 1409 516 aa, chain - ## HITS:1 COG:no KEGG:JW4343 NR:ns ## KEGG: JW4343 # Name: yjjI # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 516 1 516 516 1073 100.0 0 MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDM FEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLG QLDALLQPYVRILTQDEIDVRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAEL KQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSL PLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENS FLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFV ANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGIS DILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEG SRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ >gi|299857051|gb|ADWS01000013.1| GENE 86 87282 - 88061 1006 259 aa, chain + ## HITS:1 COG:ECs5340 KEGG:ns NR:ns ## COG: ECs5340 COG0274 # Protein_GI_number: 15834594 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 446 100.0 1e-125 MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTL KEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFD LVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPE SARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASSL LASLLKALGHGDGKSASSY >gi|299857051|gb|ADWS01000013.1| GENE 87 88188 - 89510 1772 440 aa, chain + ## HITS:1 COG:ZdeoA KEGG:ns NR:ns ## COG: ZdeoA COG0213 # Protein_GI_number: 15804954 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Escherichia coli O157:H7 EDL933 # 1 440 1 440 440 813 99.0 0 MFLAQEIIRKKRDGHALSDEEISFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLT MAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHT GGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSI PLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLT DMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKL QAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALG MAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENSWQEAAKAVKAA IKLADKAPESTPTVYRRISE >gi|299857051|gb|ADWS01000013.1| GENE 88 89562 - 90785 1574 407 aa, chain + ## HITS:1 COG:ECs5342 KEGG:ns NR:ns ## COG: ECs5342 COG1015 # Protein_GI_number: 15834596 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Escherichia coli O157:H7 # 1 407 1 407 407 840 100.0 0 MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLG LAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGHWEIAGVPVLFEWGYFSDH ENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIAC HEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAP TVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDNTIVFT NFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMSLLRDDDILILTADHGCDPTWTGTDHT REHIPVLVYGPKVKPGSLGHRETFADIGQTLAKYFGTSDMEYGKAMF >gi|299857051|gb|ADWS01000013.1| GENE 89 90865 - 91584 925 239 aa, chain + ## HITS:1 COG:ECs5343 KEGG:ns NR:ns ## COG: ECs5343 COG0813 # Protein_GI_number: 15834597 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 470 100.0 1e-133 MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISV MGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIR FKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVE MEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE >gi|299857051|gb|ADWS01000013.1| GENE 90 91859 - 92008 156 49 aa, chain - ## HITS:1 COG:ECs5344 KEGG:ns NR:ns ## COG: ECs5344 COG1396 # Protein_GI_number: 15834598 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 49 1 49 87 77 95.0 4e-15 MIDLENQEREIINIMLSQRISWLAAVRIRHKLSLAEVSKMLGISINSLK >gi|299857051|gb|ADWS01000013.1| GENE 91 92040 - 93056 1123 338 aa, chain - ## HITS:1 COG:Z5988_2 KEGG:ns NR:ns ## COG: Z5988_2 COG0095 # Protein_GI_number: 15804958 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Escherichia coli O157:H7 EDL933 # 1 338 5 342 342 692 99.0 0 MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRR MEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASG RNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITS VRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEAEIISPDKTPDLPNFAETFARQS SWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQG GLYRADMLQQECEALLVDFPDQEKELRELSTWIAGAVR >gi|299857051|gb|ADWS01000013.1| GENE 92 93084 - 93728 756 214 aa, chain - ## HITS:1 COG:ECs5345_1 KEGG:ns NR:ns ## COG: ECs5345_1 COG3726 # Protein_GI_number: 15834599 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein affecting hemolysin expression # Organism: Escherichia coli O157:H7 # 1 205 1 205 224 366 100.0 1e-101 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT RTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE >gi|299857051|gb|ADWS01000013.1| GENE 93 93834 - 94802 1065 322 aa, chain + ## HITS:1 COG:ECs5346 KEGG:ns NR:ns ## COG: ECs5346 COG0560 # Protein_GI_number: 15834600 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Escherichia coli O157:H7 # 1 322 1 322 322 638 100.0 0 MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLDKQRLTQYQSKLG AAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLGKIPHLRTPGLLVMDMDST AIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENL PLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTGNVI GDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEKAE VTIRHADLMGVFCILSGSLNQK >gi|299857051|gb|ADWS01000013.1| GENE 94 94851 - 96233 1438 460 aa, chain + ## HITS:1 COG:ECs5347 KEGG:ns NR:ns ## COG: ECs5347 COG1066 # Protein_GI_number: 15834601 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Escherichia coli O157:H7 # 1 460 1 460 460 902 100.0 0 MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL >gi|299857051|gb|ADWS01000013.1| GENE 95 96254 - 97486 1223 410 aa, chain + ## HITS:1 COG:nadR_3 KEGG:ns NR:ns ## COG: nadR_3 COG3172 # Protein_GI_number: 16132207 # Func_class: H Coenzyme transport and metabolism # Function: Predicted ATPase/kinase involved in NAD metabolism # Organism: Escherichia coli K12 # 224 410 1 187 187 382 99.0 1e-106 MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFP RQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDDTRDRALFEDSAMSQQPTV PDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGIQPDLIYTSEE ADAPQYMEHLGIDTVLVDPKRTFMSISGAQIRENPFRYWEYIPTEVKPFFVRTVAILGGE SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVK YANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLG SSVDRKEFQNLLVEMLEENNIEFVRVEEDDYDSRFLRCVELVREMMGEQR >gi|299857051|gb|ADWS01000013.1| GENE 96 97793 - 99460 2260 555 aa, chain - ## HITS:1 COG:ECs5349 KEGG:ns NR:ns ## COG: ECs5349 COG0488 # Protein_GI_number: 15834603 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 555 1 555 555 1104 100.0 0 MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIE GEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDK LAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEK PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW EGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNST EYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGA GKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNT EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETL RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA DALEPKRIKYKRIAK >gi|299857051|gb|ADWS01000013.1| GENE 97 99671 - 101608 1788 645 aa, chain + ## HITS:1 COG:ECs5350 KEGG:ns NR:ns ## COG: ECs5350 COG0741 # Protein_GI_number: 15834604 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli O157:H7 # 1 645 10 654 654 1245 99.0 0 MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAWDNRQMDVVEQMMPGLK DYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQSRFVNELARREDWRGLLA FSPEKPGTTEAQCNYYYAKWNTGQSEDAWQGAKELWLTGKSQPNACDKLFSVWRASGKQD PLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDF TRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAK WRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERG REAEAKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMY WNLDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAY NDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPG YSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAV AFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY >gi|299857051|gb|ADWS01000013.1| GENE 98 101698 - 102024 354 108 aa, chain + ## HITS:1 COG:ECs5351 KEGG:ns NR:ns ## COG: ECs5351 COG2973 # Protein_GI_number: 15834605 # Func_class: K Transcription # Function: Trp operon repressor # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 166 100.0 9e-42 MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEE LLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLLKSD >gi|299857051|gb|ADWS01000013.1| GENE 99 102109 - 102630 388 173 aa, chain - ## HITS:1 COG:ECs5352 KEGG:ns NR:ns ## COG: ECs5352 COG1986 # Protein_GI_number: 15834606 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 170 4 173 173 325 98.0 2e-89 MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVA NARRLLPEADFWVAIEAGIDGDSTFSWVVIENTSQRGEARSATLPLPAVILQKVREGEAL GPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVYQAL >gi|299857051|gb|ADWS01000013.1| GENE 100 102682 - 103329 628 215 aa, chain + ## HITS:1 COG:ECs5353 KEGG:ns NR:ns ## COG: ECs5353 COG0406 # Protein_GI_number: 15834607 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 406 100.0 1e-113 MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTR RTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIPEGE SMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSIS RVDYQESLWLASGWVVETAGDISHLDAPALDELQR >gi|299857051|gb|ADWS01000013.1| GENE 101 103326 - 104195 918 289 aa, chain - ## HITS:1 COG:ECs5354 KEGG:ns NR:ns ## COG: ECs5354 COG2207 # Protein_GI_number: 15834608 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 597 100.0 1e-171 MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRL GEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYG LNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFI LTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIRR >gi|299857051|gb|ADWS01000013.1| GENE 102 104406 - 104879 503 157 aa, chain + ## HITS:1 COG:ECs5355 KEGG:ns NR:ns ## COG: ECs5355 COG3045 # Protein_GI_number: 15834609 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 291 100.0 3e-79 MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRA KTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVR FYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ >gi|299857051|gb|ADWS01000013.1| GENE 103 104892 - 105581 639 229 aa, chain + ## HITS:1 COG:creB KEGG:ns NR:ns ## COG: creB COG0745 # Protein_GI_number: 16132215 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 229 1 229 229 445 98.0 1e-125 MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQLVPDVMILDVGLPDI SGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLR RVKKFSSPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLM DSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSLRGL >gi|299857051|gb|ADWS01000013.1| GENE 104 105581 - 107005 1169 474 aa, chain + ## HITS:1 COG:creC KEGG:ns NR:ns ## COG: creC COG0642 # Protein_GI_number: 16132216 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 474 1 474 474 909 98.0 0 MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLIDTATLLAELARPDLLSG DPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDSQGKVLFDSANKAVGQDYSRW NDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRLIGVLSVGKPNAAMAPVIKRS ERRILWASAILLGIALVIGAGMVWWINRSIARLTRYADSVTDNKPVPLPDLGSSELRKLA QALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRGAAEILREGPPPEVVARFTDNILTQ NARMQALVETLLHQARLENRQEVVLTAVDVAALFRRVSEARTVQLAEKNITLHVTPTEVN VAAEPALLDQALGNLLDNAIDFTPESGRITLSAEVDQEHVTLKVLDTGSGIPDYALSRIF ERFYSLPRANGQKSSGLGLAFVSEVARLFNGEVTLRNVQEGGVLASLRLHRHFT >gi|299857051|gb|ADWS01000013.1| GENE 105 107063 - 108415 1132 450 aa, chain + ## HITS:1 COG:ECs5358 KEGG:ns NR:ns ## COG: ECs5358 COG4452 # Protein_GI_number: 15834612 # Func_class: V Defense mechanisms # Function: Inner membrane protein involved in colicin E2 resistance # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 840 98.0 0 MLKSPLFWKMTTLFVAVLLLLIPIMLIRQVIVERADYRSDVEDAIRQSTSGPQKLVGPLI AIPVTELYTVQEEDKTVERKRSFIHFWLPESLMVDGNQNVEERKIGIYTGQVWHSDLTLK ADFDVSRLSELDAPNITFGKPFIVISVGDARGIGVVKAPEVNGTALTIEPGTGLEQGGQG VHIPLPEGDWRKQNLKLNMALNLSGTGDLSVVPAGRNSEMTLTSNWPHPSFLGDFLPAKR EVSESGFQAQWQSSWFANNLGERFASGNDTGWENFPAFSVAVTTPADQYQITDRATKYAI LLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLVMFYLLLLALSEHIGFTVAWIIASLIG ALMNGIYLQAVLKGWRNSMLFTLALLLLDGVMWGLLNSADSALLLGTSVLVVALAGMMFV TRNIDWYAFSLPKMKASKEVTMDDQLRIWK >gi|299857051|gb|ADWS01000013.1| GENE 106 108475 - 109191 838 238 aa, chain - ## HITS:1 COG:ECs5359 KEGG:ns NR:ns ## COG: ECs5359 COG0745 # Protein_GI_number: 15834613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 470 100.0 1e-133 MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGK NGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR TMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQ SRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED >gi|299857051|gb|ADWS01000013.1| GENE 107 109827 - 110513 501 228 aa, chain + ## HITS:1 COG:ECs5361 KEGG:ns NR:ns ## COG: ECs5361 COG0565 # Protein_GI_number: 15834615 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 423 98.0 1e-118 MRITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPATRWVAHGSGDIIDNIKV FPTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLT NEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQQPAKSDTTADQHQLQALRER VMALLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRLLHDIEKNITK >gi|299857051|gb|ADWS01000013.1| GENE 108 110873 - 113335 2224 820 aa, chain + ## HITS:1 COG:thrA_1 KEGG:ns NR:ns ## COG: thrA_1 COG0527 # Protein_GI_number: 16127996 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli K12 # 1 460 1 460 460 911 100.0 0 MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDA LPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINA ALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHYLESTVDIAESTRRIAASRIP ADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQV PDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQFQIPCLIKNTGNPQAPGTLIGASRD EDELPVKGISNLNNMAMFSVSGPGMKGMVGMAARVFAAMSRARISVVLITQSSSEYSISF CVPQSDCVRAERAMQEEFYLELKEGLLEPLAVTERLAIISVVGDGMRTLRGISAKFFAAL ARANINIVAIAQGSSERSISVVVNNDDATTGVRVTHQMLFNTDQVIEVFVIGVGGVGGAL LEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQAKEPFNLGRLIRL VKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHLLRHAAEKSR RKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLA REMGYTEPDPRDDLSGMDVARKLLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMA NLSQLDDLFAARVAKARDEGKVLRYVGNIDEDGACRVKIAEVDGNDPLFKVKNGENALAF YSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGV >gi|299857051|gb|ADWS01000013.1| GENE 109 113337 - 114269 734 310 aa, chain + ## HITS:1 COG:ECs0003 KEGG:ns NR:ns ## COG: ECs0003 COG0083 # Protein_GI_number: 15829257 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 640 99.0 0 MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETFSLNNLGRFADKLPSEP RENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACSVVAALMAMNEHCGKPLND TRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDIISQQVPGFDEWLWVLAYPGI KVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQPELAAKLMKDVIAEPYRERLLP GFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTAQRVADWLGKNYLQNQEGFVHICRL DTAGARVLEN >gi|299857051|gb|ADWS01000013.1| GENE 110 114270 - 115556 1435 428 aa, chain + ## HITS:1 COG:ECs0004 KEGG:ns NR:ns ## COG: ECs0004 COG0498 # Protein_GI_number: 15829258 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 843 100.0 0 MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILS AFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTH IAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETV AIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQEARNQ LVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNA MDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRA LRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAAL RKLMMNHQ >gi|299857051|gb|ADWS01000013.1| GENE 111 115770 - 116066 150 98 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0005 NR:ns ## KEGG: ECUMN_0005 # Name: yaaX # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 83 1 83 98 131 98.0 7e-30 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH YEWRGNRWHPHGPPPPPRHHKKAHHDHHGGHGPGKHHR Prediction of potential genes in microbial genomes Time: Sun May 15 22:13:10 2011 Seq name: gi|299857050|gb|ADWS01000014.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont13.1, whole genome shotgun sequence Length of sequence - 112989 bp Number of predicted genes - 110, with homology - 107 Number of transcription units - 57, operones - 27 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 189 - 248 7.7 1 1 Op 1 5/0.235 + CDS 379 - 1071 614 ## COG2186 Transcriptional regulators 2 1 Op 2 . + CDS 1094 - 2521 892 ## COG0477 Permeases of the major facilitator superfamily 3 2 Op 1 13/0.000 - CDS 2487 - 3479 799 ## COG1609 Transcriptional regulators 4 2 Op 2 8/0.059 - CDS 3483 - 4427 728 ## COG0524 Sugar kinases, ribokinase family 5 3 Op 1 16/0.000 - CDS 4538 - 5428 1154 ## COG1879 ABC-type sugar transport system, periplasmic component 6 3 Op 2 21/0.000 - CDS 5453 - 6418 1279 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 7 3 Op 3 9/0.059 - CDS 6423 - 7928 1721 ## COG1129 ABC-type sugar transport system, ATPase component 8 3 Op 4 4/0.235 - CDS 7936 - 8355 389 ## COG1869 ABC-type ribose transport system, auxiliary component - Prom 8450 - 8509 4.1 - Term 8476 - 8516 5.6 9 4 Tu 1 . - CDS 8522 - 10390 1654 ## COG3158 K+ transporter - Prom 10532 - 10591 4.5 + Prom 10517 - 10576 2.8 10 5 Op 1 7/0.176 + CDS 10613 - 12109 1335 ## COG0714 MoxR-like ATPases 11 5 Op 2 . + CDS 12103 - 13554 1067 ## COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 12 6 Tu 1 . - CDS 13559 - 14551 1114 ## COG2502 Asparagine synthetase A - Prom 14621 - 14680 5.0 + Prom 14617 - 14676 7.0 13 7 Op 1 4/0.235 + CDS 14703 - 15161 472 ## COG1522 Transcriptional regulators + Prom 15170 - 15229 2.0 14 7 Op 2 5/0.235 + CDS 15251 - 15694 546 ## COG0716 Flavodoxins + Prom 15921 - 15980 4.7 15 8 Op 1 24/0.000 + CDS 16073 - 17962 1917 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 16 8 Op 2 3/0.588 + CDS 18026 - 18649 562 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Term 18737 - 18788 4.2 + Prom 19122 - 19181 5.8 17 9 Op 1 8/0.059 + CDS 19266 - 19646 172 ## COG3312 F0F1-type ATP synthase, subunit I 18 9 Op 2 40/0.000 + CDS 19655 - 20470 771 ## COG0356 F0F1-type ATP synthase, subunit a 19 9 Op 3 37/0.000 + CDS 20517 - 20756 359 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 20 9 Op 4 38/0.000 + CDS 20818 - 21288 569 ## COG0711 F0F1-type ATP synthase, subunit b 21 9 Op 5 41/0.000 + CDS 21303 - 21836 536 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 22 9 Op 6 42/0.000 + CDS 21849 - 23390 1814 ## COG0056 F0F1-type ATP synthase, alpha subunit 23 9 Op 7 42/0.000 + CDS 23441 - 24304 1019 ## COG0224 F0F1-type ATP synthase, gamma subunit 24 9 Op 8 42/0.000 + CDS 24331 - 25713 1697 ## COG0055 F0F1-type ATP synthase, beta subunit 25 9 Op 9 6/0.176 + CDS 25740 - 26153 483 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 26176 - 26209 4.5 26 10 Tu 1 9/0.059 + CDS 26504 - 27874 1669 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 27 11 Tu 1 1/0.882 + CDS 28036 - 29865 2317 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 29886 - 29917 2.3 + Prom 29907 - 29966 8.6 28 12 Tu 1 7/0.176 + CDS 30167 - 30739 466 ## COG3539 P pilus assembly protein, pilin FimA + Prom 30808 - 30867 5.9 29 13 Op 1 10/0.000 + CDS 30922 - 31518 237 ## COG3121 P pilus assembly protein, chaperone PapD 30 13 Op 2 6/0.176 + CDS 31543 - 34065 1386 ## COG3188 P pilus assembly protein, porin PapC 31 13 Op 3 2/0.765 + CDS 34076 - 35149 395 ## COG3539 P pilus assembly protein, pilin FimA + Prom 35259 - 35318 9.1 32 14 Op 1 39/0.000 + CDS 35397 - 36437 1181 ## COG0226 ABC-type phosphate transport system, periplasmic component 33 14 Op 2 38/0.000 + CDS 36524 - 37483 1283 ## COG0573 ABC-type phosphate transport system, permease component 34 14 Op 3 41/0.000 + CDS 37483 - 38373 1168 ## COG0581 ABC-type phosphate transport system, permease component 35 14 Op 4 32/0.000 + CDS 38464 - 39237 345 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 36 14 Op 5 . + CDS 39252 - 39977 906 ## COG0704 Phosphate uptake regulator + Term 39987 - 40029 9.0 + Prom 39994 - 40053 6.8 37 15 Op 1 . + CDS 40263 - 40349 62 ## 38 15 Op 2 . + CDS 40416 - 40850 321 ## COG3711 Transcriptional antiterminator 39 15 Op 3 7/0.176 + CDS 40860 - 41099 144 ## COG3711 Transcriptional antiterminator + Term 41147 - 41202 12.3 + Prom 41134 - 41193 4.9 40 16 Op 1 8/0.059 + CDS 41233 - 43110 1380 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 41 16 Op 2 1/0.882 + CDS 43129 - 44523 1220 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 44544 - 44588 5.7 42 17 Op 1 . + CDS 44609 - 46225 1608 ## COG4580 Maltoporin (phage lambda and maltose receptor) 43 17 Op 2 . + CDS 46252 - 47421 1104 ## COG2382 Enterochelin esterase and related enzymes 44 17 Op 3 . + CDS 47436 - 48158 791 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 48172 - 48213 5.2 45 18 Op 1 . - CDS 48220 - 48807 182 ## COG3196 Uncharacterized protein conserved in bacteria 46 18 Op 2 . - CDS 48856 - 49329 253 ## ECO103_4442 putative inner membrane protein 47 18 Op 3 . - CDS 49396 - 50061 664 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 50193 - 50252 1.8 + Prom 50138 - 50197 1.6 48 19 Tu 1 . + CDS 50228 - 51565 1591 ## COG2252 Permeases + Term 51578 - 51628 6.6 - Term 51574 - 51610 5.3 49 20 Op 1 3/0.588 - CDS 51619 - 52185 741 ## COG0431 Predicted flavoprotein 50 20 Op 2 4/0.235 - CDS 52207 - 52968 510 ## COG2091 Phosphopantetheinyl transferase - Prom 53050 - 53109 6.7 51 21 Op 1 9/0.059 - CDS 53113 - 54072 721 ## COG0583 Transcriptional regulator 52 21 Op 2 3/0.588 - CDS 54047 - 55222 759 ## COG0477 Permeases of the major facilitator superfamily - Prom 55249 - 55308 2.5 - Term 55313 - 55341 0.6 53 22 Op 1 3/0.588 - CDS 55354 - 56601 981 ## COG0814 Amino acid permeases - Term 56642 - 56680 3.7 54 22 Op 2 . - CDS 56692 - 58107 1912 ## COG3033 Tryptophanase - Prom 58142 - 58201 6.7 - Term 58589 - 58635 11.7 55 23 Op 1 10/0.000 - CDS 58645 - 60009 1564 ## COG0486 Predicted GTPase - Term 60059 - 60089 3.0 56 23 Op 2 22/0.000 - CDS 60115 - 61761 1922 ## COG0706 Preprotein translocase subunit YidC - Prom 61825 - 61884 3.9 57 23 Op 3 . - CDS 61985 - 62311 235 ## COG0594 RNase P protein component 58 23 Op 4 . - CDS 62361 - 62501 228 ## PROTEIN SUPPORTED gi|15804297|ref|NP_290336.1| 50S ribosomal protein L34 - Prom 62597 - 62656 6.3 59 24 Op 1 16/0.000 + CDS 63108 - 64511 1227 ## COG0593 ATPase involved in DNA replication initiation 60 24 Op 2 18/0.000 + CDS 64516 - 65616 1248 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 61 24 Op 3 9/0.059 + CDS 65616 - 66689 740 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 62 24 Op 4 1/0.882 + CDS 66718 - 69132 3079 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 69264 - 69306 11.9 + Prom 69266 - 69325 6.6 63 25 Tu 1 . + CDS 69372 - 69770 538 ## COG3753 Uncharacterized protein conserved in bacteria + Term 69777 - 69818 5.1 + Prom 69775 - 69834 3.8 64 26 Tu 1 . + CDS 69885 - 70697 1140 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 70706 - 70747 6.4 - Term 70686 - 70742 6.3 65 27 Tu 1 . - CDS 70743 - 71399 287 ## EcE24377A_4205 hypothetical protein - Prom 71542 - 71601 4.9 + Prom 71486 - 71545 8.7 66 28 Op 1 1/0.882 + CDS 71677 - 72366 656 ## COG2186 Transcriptional regulators 67 28 Op 2 2/0.765 + CDS 72363 - 73241 530 ## COG3734 2-keto-3-deoxy-galactonokinase 68 28 Op 3 1/0.882 + CDS 73225 - 73842 561 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 69 28 Op 4 7/0.176 + CDS 73839 - 74987 1538 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 70 29 Tu 1 . + CDS 75107 - 76399 1337 ## COG0477 Permeases of the major facilitator superfamily + Term 76410 - 76456 5.6 71 30 Tu 1 . - CDS 76396 - 77478 578 ## COG0644 Dehydrogenases (flavoproteins) 72 31 Tu 1 . + CDS 77525 - 78775 898 ## ECSE_3975 hypothetical protein 73 32 Tu 1 . - CDS 78777 - 79040 276 ## COG5645 Predicted periplasmic lipoprotein - Prom 79228 - 79287 3.0 74 33 Tu 1 4/0.235 + CDS 79415 - 79828 581 ## COG0071 Molecular chaperone (small heat shock protein) 75 34 Tu 1 1/0.882 + CDS 79940 - 80368 542 ## COG0071 Molecular chaperone (small heat shock protein) + Term 80384 - 80416 5.4 + Prom 80388 - 80447 4.4 76 35 Tu 1 . + CDS 80565 - 82226 1839 ## COG2985 Predicted permease + Term 82234 - 82280 11.3 77 36 Tu 1 . - CDS 82223 - 82939 514 ## COG2188 Transcriptional regulators + Prom 82975 - 83034 3.8 78 37 Op 1 2/0.765 + CDS 83235 - 84851 1771 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 79 37 Op 2 . + CDS 84851 - 85489 547 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 80 37 Op 3 . + CDS 85453 - 85665 224 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases + Term 85668 - 85714 10.0 81 38 Tu 1 8/0.059 - CDS 85662 - 86273 391 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 86328 - 86387 2.1 82 39 Tu 1 . - CDS 86409 - 86555 169 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 86585 - 86644 2.6 + Prom 86511 - 86570 5.0 83 40 Op 1 4/0.235 + CDS 86722 - 88437 1772 ## COG4146 Predicted symporter 84 40 Op 2 . + CDS 88434 - 89927 1255 ## COG3119 Arylsulfatase A and related enzymes + Term 89934 - 89972 4.2 - Term 89922 - 89960 1.2 85 41 Tu 1 . - CDS 89974 - 90384 365 ## EC55989_4146 conserved hypothetical protein; putative inner membrane protein - Prom 90490 - 90549 7.1 + Prom 90365 - 90424 3.6 86 42 Op 1 . + CDS 90533 - 90880 468 ## COG2149 Predicted membrane protein 87 42 Op 2 . + CDS 90870 - 91232 226 ## ECO111_4500 putative inner membrane protein 88 42 Op 3 . + CDS 91229 - 91726 374 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Term 91672 - 91721 2.0 89 43 Tu 1 . - CDS 91734 - 92885 1169 ## COG0477 Permeases of the major facilitator superfamily - Prom 92940 - 92999 5.3 - Term 93280 - 93314 7.0 90 44 Tu 1 . - CDS 93337 - 93426 99 ## - Prom 93642 - 93701 5.0 91 45 Op 1 32/0.000 + CDS 94194 - 95882 1860 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 92 45 Op 2 1/0.882 + CDS 95886 - 96176 320 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Term 96199 - 96237 6.0 93 46 Tu 1 5/0.235 + CDS 96251 - 96841 771 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Prom 96855 - 96914 1.7 94 47 Op 1 5/0.235 + CDS 96952 - 98343 1082 ## COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific 95 47 Op 2 3/0.588 + CDS 98353 - 99672 1251 ## COG2271 Sugar phosphate permease + Prom 99724 - 99783 2.3 96 48 Tu 1 . + CDS 99810 - 101201 1726 ## COG2271 Sugar phosphate permease + Term 101220 - 101250 3.3 97 49 Tu 1 . - CDS 101246 - 103012 1617 ## COG1001 Adenine deaminase - Prom 103062 - 103121 6.1 + Prom 102997 - 103056 5.8 98 50 Op 1 . + CDS 103109 - 104521 1255 ## COG2252 Permeases 99 50 Op 2 . + CDS 104574 - 105026 387 ## APECO1_2789 hypothetical protein + Prom 105146 - 105205 3.7 100 51 Tu 1 . + CDS 105237 - 106427 1108 ## COG2814 Arabinose efflux permease 101 52 Tu 1 . - CDS 106468 - 106761 267 ## SSON_3614 putative transport protein - Prom 106961 - 107020 5.6 + Prom 106900 - 106959 5.8 102 53 Tu 1 . + CDS 106983 - 107801 733 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Term 107681 - 107737 5.2 103 54 Op 1 8/0.059 - CDS 107805 - 108728 698 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 108763 - 108822 2.3 104 54 Op 2 . - CDS 108839 - 110023 597 ## COG0477 Permeases of the major facilitator superfamily - Prom 110206 - 110265 9.8 - Term 110506 - 110546 -0.8 105 55 Op 1 . - CDS 110790 - 111110 250 ## JW2627 toxin of the YpjF-YfjZ toxin-antitoxin system 106 55 Op 2 . - CDS 111131 - 111457 176 ## ECL_03717 putative antitoxin module of toxin-antitoxin system 107 55 Op 3 . - CDS 111470 - 111940 348 ## COG2003 DNA repair proteins - Term 111950 - 111984 -0.9 108 55 Op 4 . - CDS 112009 - 112581 358 ## YPK_3134 hypothetical protein + Prom 112436 - 112495 3.9 109 56 Tu 1 . + CDS 112582 - 112764 63 ## + Term 112765 - 112798 -0.2 110 57 Tu 1 . - CDS 112768 - 112974 133 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|299857050|gb|ADWS01000014.1| GENE 1 379 - 1071 614 230 aa, chain + ## HITS:1 COG:ZyieP KEGG:ns NR:ns ## COG: ZyieP COG2186 # Protein_GI_number: 15804355 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 EDL933 # 1 230 1 230 230 461 99.0 1e-130 MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVSRTAVREAVKT LTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQVIDHFLVMRICLEPQACL LAATVGTAEQKAHLNTLMAEMAALKENFRRERWIEVDMAWHEHIYEMSANPFLTSFASLF HSVYHTYFTSITSDTVIKLDLHQAIVDAIVQSDGDAAFKACQALLRSPDK >gi|299857050|gb|ADWS01000014.1| GENE 2 1094 - 2521 892 475 aa, chain + ## HITS:1 COG:yieO KEGG:ns NR:ns ## COG: yieO COG0477 # Protein_GI_number: 16131622 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 475 1 475 475 828 99.0 0 MSDKKNRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVA MLIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQLVVFRVIQGIGGAMMMPVA RLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVTWATWHWIFLINIPIGIAGLL YARKHMPNFTTARRRFDITGFLLFGLSLVLFSSGIELFGEKIVASWIALTVIVTSIGLLL LYILHARHTPNPLISLDLFKTRTFSIGIVGNIATRLGTGCVPFLMPLMLQVGFGYQAFIA GCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGITVIIGLMIAQFSLQSPAMAIWMLILP LFILGMAMSTQFTAMNTITLADLTDDNASSGNSVLAVTQQLSISLGVAVSAAVLRVYEGM EGTTTVEQFHYTFITMGIITVASAAMFMLLKTTDGNNLIKRQRKSKPNRVPSESE >gi|299857050|gb|ADWS01000014.1| GENE 3 2487 - 3479 799 330 aa, chain - ## HITS:1 COG:ECs4695 KEGG:ns NR:ns ## COG: ECs4695 COG1609 # Protein_GI_number: 15833949 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 661 100.0 0 MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTH TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLL LLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRI ACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQ AVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELA IDVLIHRITQPTLQQQRLQLTPILMERGSA >gi|299857050|gb|ADWS01000014.1| GENE 4 3483 - 4427 728 314 aa, chain - ## HITS:1 COG:ECs4694 KEGG:ns NR:ns ## COG: ECs4694 COG0524 # Protein_GI_number: 15833948 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 6 314 1 309 309 529 100.0 1e-150 MDIPNMQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSG ANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAG ANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPD ELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNG EGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSV PWREEIDAFLDRQR >gi|299857050|gb|ADWS01000014.1| GENE 5 4538 - 5428 1154 296 aa, chain - ## HITS:1 COG:ECs4693 KEGG:ns NR:ns ## COG: ECs4693 COG1879 # Protein_GI_number: 15833947 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 493 100.0 1e-139 MNMKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLV VLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKG EVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFN VLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFD GTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVVKQ >gi|299857050|gb|ADWS01000014.1| GENE 6 5453 - 6418 1279 321 aa, chain - ## HITS:1 COG:ECs4692 KEGG:ns NR:ns ## COG: ECs4692 COG1172 # Protein_GI_number: 15833946 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 481 100.0 1e-135 MTTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMA VGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVA KGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMG IVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVA RLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSY YQMIVKAVVILLAVLVDNKKQ >gi|299857050|gb|ADWS01000014.1| GENE 7 6423 - 7928 1721 501 aa, chain - ## HITS:1 COG:rbsA KEGG:ns NR:ns ## COG: rbsA COG1129 # Protein_GI_number: 16131617 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Escherichia coli K12 # 1 501 1 501 501 962 99.0 0 MEALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYARDAGT LLWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYA EADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESL FRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGR KLEDQYPHLDKAPGDIRLKVDNLCGPGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYG ALPRTSGYVTLDGHEVVTRSPQDGLASGIVYISEDRKRDGLVLGMSVKENMSLTALRYFS RAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILD EPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTRE QATQEVLMAAAVGKLNRVNQE >gi|299857050|gb|ADWS01000014.1| GENE 8 7936 - 8355 389 139 aa, chain - ## HITS:1 COG:rbsD KEGG:ns NR:ns ## COG: rbsD COG1869 # Protein_GI_number: 16131616 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Escherichia coli K12 # 1 139 13 151 151 252 98.0 2e-67 MKKGTVLNSDISSMISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN EMQVEAAIIAEEIKQHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI RSGECSPYANIILCAGVTF >gi|299857050|gb|ADWS01000014.1| GENE 9 8522 - 10390 1654 622 aa, chain - ## HITS:1 COG:ECs4689 KEGG:ns NR:ns ## COG: ECs4689 COG3158 # Protein_GI_number: 15833943 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Escherichia coli O157:H7 # 1 622 1 622 622 1177 99.0 0 MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLL IFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSMLVIMGLIGGSFFYGEVVIT PAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLIL AGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGK FPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLIIAALATVIA SQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVSFEHS SNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLL SGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYM SRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASY GWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLILGKRPWYLRLRGKLYLLLQRNAL RAPDQFEIPPNRVIELGTQVEI >gi|299857050|gb|ADWS01000014.1| GENE 10 10613 - 12109 1335 498 aa, chain + ## HITS:1 COG:yieN KEGG:ns NR:ns ## COG: yieN COG0714 # Protein_GI_number: 16131614 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Escherichia coli K12 # 1 498 9 506 506 945 99.0 0 MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLK FAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKAG PAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKV QDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGEITLPDHVFELIFMLRQQLN KLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSLNLIQQQIDV LMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIRLGGIFSRRQQYQLPVNVTAS TLTLLLQKPLKLHDMEVVHISFERNALEQWLSKGGEIRGKLNGIGFAQKLNLEVDSAQHL VVRDVSLQGSTLALPGSSAEGLPGEIKQQLEELESDWRKQHALFSEQQKCLFIPGDWLGR IEASLQDVGAQIRQAQQC >gi|299857050|gb|ADWS01000014.1| GENE 11 12103 - 13554 1067 483 aa, chain + ## HITS:1 COG:ECs4687 KEGG:ns NR:ns ## COG: ECs4687 COG2425 # Protein_GI_number: 15833941 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Escherichia coli O157:H7 # 1 473 1 473 483 890 99.0 0 MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKAAITDDVPRWREALRSR LKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRLNSPWAEQARQLVDANSTI TSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQERMTLSGQLEPILADNNTAA GRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQLGRSREAKSIPRNDAQMEAFRT MVREPATVPEQVDGLQQSDDILRLLPPELATLGITELEYEFYRRLVEKQLLTYRLHGESW REKVIERPVVHKDYDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRIALAENRRCYI MLFSTEIVRYELSGPQGIEQAIRFLSQQFRGGTDLASCFRAIMERLQSREWFDADAVVIS DFIAQRLPDDVTSKVKELQRVHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRR WRR >gi|299857050|gb|ADWS01000014.1| GENE 12 13559 - 14551 1114 330 aa, chain - ## HITS:1 COG:ECs4686 KEGG:ns NR:ns ## COG: ECs4686 COG2502 # Protein_GI_number: 15833940 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 655 99.0 0 MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVK ALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEERLSPLHSVYVDQWDWE RVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDL DAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDYDDWSTPSELGHAGLNGDILVWN PVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLQLEWHQALLRGEMPQTIGGGIGQSRL TMLLLQLPHIGQVQCGVWPAAVRENVPSLL >gi|299857050|gb|ADWS01000014.1| GENE 13 14703 - 15161 472 152 aa, chain + ## HITS:1 COG:ECs4685 KEGG:ns NR:ns ## COG: ECs4685 COG1522 # Protein_GI_number: 15833939 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 296 100.0 8e-81 MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVEKMKQAGIITGARIDVS PKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTTGHYSIFIKVMCRSIDALQ HVLINKIQTIDEIQSTETLIVLQNPIMRTIKP >gi|299857050|gb|ADWS01000014.1| GENE 14 15251 - 15694 546 147 aa, chain + ## HITS:1 COG:ECs4684 KEGG:ns NR:ns ## COG: ECs4684 COG0716 # Protein_GI_number: 15833938 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 277 99.0 4e-75 MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLSASGIWLIISSTHGAG DIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGET LKINILDHDIPEDPAEEWLGSWINLLK >gi|299857050|gb|ADWS01000014.1| GENE 15 16073 - 17962 1917 629 aa, chain + ## HITS:1 COG:gidA KEGG:ns NR:ns ## COG: gidA COG0445 # Protein_GI_number: 16131609 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Escherichia coli K12 # 1 629 1 629 629 1248 100.0 0 MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS IPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV PCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPE GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL GTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRL KSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAE QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ ASRISGVTPAAISILLVWLKKQGMLRRSA >gi|299857050|gb|ADWS01000014.1| GENE 16 18026 - 18649 562 207 aa, chain + ## HITS:1 COG:ECs4682 KEGG:ns NR:ns ## COG: ECs4682 COG0357 # Protein_GI_number: 15833936 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 411 100.0 1e-115 MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVV APYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPV QSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEY QVESVVKLQVPALDGERHLVVIKANKI >gi|299857050|gb|ADWS01000014.1| GENE 17 19266 - 19646 172 126 aa, chain + ## HITS:1 COG:ECs4681 KEGG:ns NR:ns ## COG: ECs4681 COG3312 # Protein_GI_number: 15833935 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit I # Organism: Escherichia coli O157:H7 # 1 126 5 130 130 153 99.0 7e-38 MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKGPFWGVSAISGGLAVFLPNVLFMIFAWR HQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFLPLIVTWVLVLVVQILAPA VINNKG >gi|299857050|gb|ADWS01000014.1| GENE 18 19655 - 20470 771 271 aa, chain + ## HITS:1 COG:STM3871 KEGG:ns NR:ns ## COG: STM3871 COG0356 # Protein_GI_number: 16767155 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Salmonella typhimurium LT2 # 1 271 1 271 271 467 96.0 1e-131 MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLF RSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDL LPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTL QPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVP WAIFHILIITLQAFIFMVLTIVYLSMASEEH >gi|299857050|gb|ADWS01000014.1| GENE 19 20517 - 20756 359 79 aa, chain + ## HITS:1 COG:BU003 KEGG:ns NR:ns ## COG: BU003 COG0636 # Protein_GI_number: 15616633 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Buchnera sp. APS # 1 79 1 79 79 97 83.0 5e-21 MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLV DAIPMIAVGLGLYVMFAVA >gi|299857050|gb|ADWS01000014.1| GENE 20 20818 - 21288 569 156 aa, chain + ## HITS:1 COG:ECs4678 KEGG:ns NR:ns ## COG: ECs4678 COG0711 # Protein_GI_number: 15833932 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 201 100.0 5e-52 MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGLASAERAHKDLDLAKAS ATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREEL RKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL >gi|299857050|gb|ADWS01000014.1| GENE 21 21303 - 21836 536 177 aa, chain + ## HITS:1 COG:ECs4677 KEGG:ns NR:ns ## COG: ECs4677 COG0712 # Protein_GI_number: 15833931 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Escherichia coli O157:H7 # 1 177 1 177 177 300 100.0 8e-82 MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAES FIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQ QLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQS >gi|299857050|gb|ADWS01000014.1| GENE 22 21849 - 23390 1814 513 aa, chain + ## HITS:1 COG:ECs4676 KEGG:ns NR:ns ## COG: ECs4676 COG0056 # Protein_GI_number: 15833930 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 986 100.0 0 MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLPGNRY AIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGP LDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAI DAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPY AGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLER AARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLF NAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQ LDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHA PLMQEINQTGGYNDEIEGKLKGILDSFKATQSW >gi|299857050|gb|ADWS01000014.1| GENE 23 23441 - 24304 1019 287 aa, chain + ## HITS:1 COG:ECs4675 KEGG:ns NR:ns ## COG: ECs4675 COG0224 # Protein_GI_number: 15833929 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 555 100.0 1e-158 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGN LEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGS KGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMS QVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV >gi|299857050|gb|ADWS01000014.1| GENE 24 24331 - 25713 1697 460 aa, chain + ## HITS:1 COG:ECs4674 KEGG:ns NR:ns ## COG: ECs4674 COG0055 # Protein_GI_number: 15833928 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Escherichia coli O157:H7 # 1 460 1 460 460 890 100.0 0 MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSS DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEEL SNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV GERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVP ADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARG VQSILQRYQELKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFFVAEVFTGSPGKYVS LKDTIRGFKGIMEGEYDHLPEQAFYMVGSIEEAVEKAKKL >gi|299857050|gb|ADWS01000014.1| GENE 25 25740 - 26153 483 137 aa, chain + ## HITS:1 COG:atpC KEGG:ns NR:ns ## COG: atpC COG0355 # Protein_GI_number: 16131599 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Escherichia coli K12 # 1 137 3 139 139 243 100.0 8e-65 MTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEF IYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAEL AKAIAQLRVIELTKKAM >gi|299857050|gb|ADWS01000014.1| GENE 26 26504 - 27874 1669 456 aa, chain + ## HITS:1 COG:ECs4672 KEGG:ns NR:ns ## COG: ECs4672 COG1207 # Protein_GI_number: 15833926 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 890 100.0 0 MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGD LLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDA KPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADM KRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQ SEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKN SVIGDDCEISPYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSK AGHLTYLGDAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGAT IAAGTTVTRNVGENALAISRVPQTQKEGWRRPVKKK >gi|299857050|gb|ADWS01000014.1| GENE 27 28036 - 29865 2317 609 aa, chain + ## HITS:1 COG:glmS KEGG:ns NR:ns ## COG: glmS COG0449 # Protein_GI_number: 16131597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Escherichia coli K12 # 1 609 1 609 609 1196 100.0 0 MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAE EHPLHGGTGIAHTRWATHGEPSEVNAHPHVSEHIVVVHNGIIENHEPLREELKARGYTFV SETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLV IGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQ YDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILA CGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGL RLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKL SRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIA LEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRAR GGQLYVFADQDAGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPR NLAKSVTVE >gi|299857050|gb|ADWS01000014.1| GENE 28 30167 - 30739 466 190 aa, chain + ## HITS:1 COG:ECs4670 KEGG:ns NR:ns ## COG: ECs4670 COG3539 # Protein_GI_number: 15833924 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 190 1 200 200 193 55.0 1e-49 MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAF SGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDGDLKVGTPLTAGNPGDFTGTG QAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEMKFIARYVATNATVTAGTANA DSQFTVEYKK >gi|299857050|gb|ADWS01000014.1| GENE 29 30922 - 31518 237 198 aa, chain + ## HITS:1 COG:STM0176 KEGG:ns NR:ns ## COG: STM0176 COG3121 # Protein_GI_number: 16763566 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 1 197 31 226 227 132 38.0 5e-31 MVYLSNNADKSISVFSKEEKIPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLEPSQEKILR IIHTKGVSLPDDRESVFWLNIKNIPPSASNKATNSLEIAVKTRIKLFWRPANIRLIPEDA APKVKWRREGRNLIAENPNPIHISVMDVIVDGHDVPLNMIRPFETLTLPLPANSAGGQMT WRFINDYGAVSDPIKMTL >gi|299857050|gb|ADWS01000014.1| GENE 30 31543 - 34065 1386 840 aa, chain + ## HITS:1 COG:ECs4667 KEGG:ns NR:ns ## COG: ECs4667 COG3188 # Protein_GI_number: 15833921 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 839 1 843 844 1106 63.0 0 MMTTRIVVGLTAGTCLIFSQNLMAEVSVFNPALLEIDHQSGVDIRQFNRANLMPPGVYSV DIFINGKMFERQDVTFVQDNPDADLHACFIAIKKTLSSFGIKVDALKSFNDVDETVCLDP APRIEGSSWQFDSDKLQLNISIPQIYMDAMAYDYISPTRWDEGINALTINYDFSGSHTLR SDYGSQETDTSYLNLRNGLNIGPWRLRNYSTLNTSDGRAEYNSISTWIQRDIAALRSQIM IGDTWTASDIFDSTQIRGARLYTDNDMLPASQNGFAPVVRGIAKSNATVIIRQNGYVIYQ SAVPQGAFEITDLNTASTGGDLDVTIKEEDGSEQRFTQPYASLAILKREGQTDVDVSVGE LRDEDGFTPDVLQAQILHGFSHGITLYGGMQAAENYGSAALGVGKDLGALGAISFDVTHA RANFSHDDTETGQSYRFLYSKRFDDTDTSLRLVGYRYSTEGYYTLNEWASRRNSPEDFWE TGNRRSRVEGTLTQSLGRDYGNLYLTLSRQQYWHTDDVERLMQFGYSSSWKRLSWNVSWS YSNTARQRTGNNHASDNTSEQIYMLSLSVPLSGWWGNSYATYSVSQNDNSGSSHQLGLSG TALERNNLSWNLMQSYNSHDDEVGGNMSLTYDGSYGTVNGSYNYSQNSQRLNYGIRGGIL AHSEGVTLSQELGETIALVKAPGAAGLEIDNMRGAATDWRGYTVKTQLNPYDENRVAISD NYFSKSNIELDNTVVTMVPTRGAVVKAEFVTHVGYRVLFRVLNANGKPVPFGAIAAIQDA SLADSGIVGDRGELYLSGLPEKGQVTLSWGENASTKCIFNYSLSTPESESGLIEQGVTCH >gi|299857050|gb|ADWS01000014.1| GENE 31 34076 - 35149 395 357 aa, chain + ## HITS:1 COG:ECs4665 KEGG:ns NR:ns ## COG: ECs4665 COG3539 # Protein_GI_number: 15833919 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 356 1 359 360 250 42.0 3e-66 MNKYIKQWCFAVFMLSLSSVALAAPKGICTPDNGVFHSTLDFSGYLITANENKVGTTFNT TVTNGSSYPGRCHCDTGNVGEFPYIYYTSKINQALTYAGVHSNINYYDLNPNLDVGIAID ILGVGYVNAPFEYHANNPSGNTKYNCNRIEPLSISSGAKAIVYFYIKKTFAGKLIIPETK IVTLYGTISRDTPVDYSQPMADVYIRGDITAPQSCEINNLQPVYFDFKEIPAADFSSVVG SAVTTHKITKTVTIECENLGILNTDDISTSFYATEPNTDNSMVVTSNSNVGIKIYDKNNK EIKVNGGELPTDMGKSTVYGEKSGSVTFSAAPASLTGARPAPGQFTATATITVEIVR >gi|299857050|gb|ADWS01000014.1| GENE 32 35397 - 36437 1181 346 aa, chain + ## HITS:1 COG:pstS KEGG:ns NR:ns ## COG: pstS COG0226 # Protein_GI_number: 16131596 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 346 1 346 346 632 100.0 0 MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKWADTYQKETGNKVNYQG IGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIGGVVLAVNIPGLKSGELVL DGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYLAKVNEE WKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGK PVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWPITSTTFILIHKDQKKPEQGTEVLK FFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWKTNIKDSSGKPLY >gi|299857050|gb|ADWS01000014.1| GENE 33 36524 - 37483 1283 319 aa, chain + ## HITS:1 COG:ECs4663 KEGG:ns NR:ns ## COG: ECs4663 COG0573 # Protein_GI_number: 15833917 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 319 1 319 319 535 100.0 1e-152 MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTK EWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLA AIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIM IIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALG ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFI VLAASKFMIMRLAKNEGAR >gi|299857050|gb|ADWS01000014.1| GENE 34 37483 - 38373 1168 296 aa, chain + ## HITS:1 COG:ECs4662 KEGG:ns NR:ns ## COG: ECs4662 COG0581 # Protein_GI_number: 15833916 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 507 100.0 1e-144 MAMVEMQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFWLIWILMSTITRGIDGM SLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWLAEV IRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIALALLQVPIVIRTTENMLKLVP DSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAIARIAGETAPLLFTALSNQFWST DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLCVLLLNILARVVFAKNKHG >gi|299857050|gb|ADWS01000014.1| GENE 35 38464 - 39237 345 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 11 252 2 239 245 137 36 2e-31 MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMF ELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEK LSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEP CSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLF TKPAKKQTEDYITGRYG >gi|299857050|gb|ADWS01000014.1| GENE 36 39252 - 39977 906 241 aa, chain + ## HITS:1 COG:phoU KEGG:ns NR:ns ## COG: phoU COG0704 # Protein_GI_number: 16131592 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Escherichia coli K12 # 1 241 1 241 241 449 100.0 1e-126 MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMHNQDSDLAKRVIEGDKN VNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERIGDVADKICRTALEKFSQQ HQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYREDKKVDQEYEGIVRQLMTYMM EDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVKGQDFRHVGGDELDKLLAGKDSD K >gi|299857050|gb|ADWS01000014.1| GENE 37 40263 - 40349 62 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNMQITKILNNNVVVVIDDQQREKVVMG >gi|299857050|gb|ADWS01000014.1| GENE 38 40416 - 40850 321 144 aa, chain + ## HITS:1 COG:bglG KEGG:ns NR:ns ## COG: bglG COG3711 # Protein_GI_number: 16131591 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli K12 # 1 144 52 195 278 276 99.0 8e-75 MSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQ NVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNME DVAGVTQLMREMLQLIKFQFSLNY >gi|299857050|gb|ADWS01000014.1| GENE 39 40860 - 41099 144 79 aa, chain + ## HITS:1 COG:bglG KEGG:ns NR:ns ## COG: bglG COG3711 # Protein_GI_number: 16131591 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli K12 # 1 79 200 278 278 152 98.0 1e-37 MSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKI SPAEIMFLAINIERVRKEH >gi|299857050|gb|ADWS01000014.1| GENE 40 41233 - 43110 1380 625 aa, chain + ## HITS:1 COG:bglF_2 KEGG:ns NR:ns ## COG: bglF_2 COG1263 # Protein_GI_number: 16131590 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 91 451 1 361 361 681 99.0 0 MTELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQ VVIGNHVADVFLAVNSVAGLGEKAQQAPENDEKGNLLNRFVYVISGIFTPLIGLMAATGI LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA LVHPLILTAFENGQKADELGLDFLGIPVTLLNYSSSVIPIIFSAWLCSILERRLNAWLPS AIKNFFTPLLCLMVITPVTFLLVGPLSTWISELIAAGYLWLYQAVPAFAGAVMGGFWQIF VMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCERDAQKKVVAGSAA LTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFGLPSIFTFMQTIP STGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQEKTPEVITPPEQGGIC SPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIASLFATLHAIGIESDD GVELLIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIREAGFDLTTPVLISNS DDFTDVLPHGTAQISAGEPLLSIIR >gi|299857050|gb|ADWS01000014.1| GENE 41 43129 - 44523 1220 464 aa, chain + ## HITS:1 COG:bglB KEGG:ns NR:ns ## COG: bglB COG2723 # Protein_GI_number: 16131589 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 464 1 464 470 976 98.0 0 MKAFPETFLWGGATAANQVEGAWLEDGKGITTSDLQPHGVMGKMEPRILGKENIKDVAID FYHRYPEDIALFAEMGFTCLRISIAWARIFPQGDEAEPNEAGLAFYDRLFDEMAQAGIKP LVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAP FTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLIPEAKIGNMLLGGLVYPLTCQPQD MLEAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYY MTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIV ENGLGAKDSVEADGSIQDDYRIAYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQ MSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIKTRGLSLKK >gi|299857050|gb|ADWS01000014.1| GENE 42 44609 - 46225 1608 538 aa, chain + ## HITS:1 COG:yieC KEGG:ns NR:ns ## COG: yieC COG4580 # Protein_GI_number: 16131588 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli K12 # 1 538 1 538 538 1013 99.0 0 MFRRNLITSAILLMAPLAFSAQSLAESLTVEHRLELLEKALRETQSELKKYKDEEKKKYT PATVNRSVSTNDQGYAANPFPTSSAAKPDAVLVKNEEKNASETGSIYSSMTLKDFSKFVK DEIGFSYNGYYRSGWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNENGKRVDA VVMMDGNVGQQYSTGWFGDNAGGENFMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEI QMLDWKTQRTDAAAGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTNTIDLRYK DIPLWDKATLMVSGRYVTANESASEKDNQDNNGYYDWKDTWMFGTSLTQKFDKGGFNEFS FLVANNSIASNFGRYAGASPFTTFNGCYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVY SFGNDIYSYETGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGY KTTLFHTFKVNTSMLTSRPEIRFYATYIKALENELDGFTFEDNKDDQFAVGAQAEIWW >gi|299857050|gb|ADWS01000014.1| GENE 43 46252 - 47421 1104 389 aa, chain + ## HITS:1 COG:yieL KEGG:ns NR:ns ## COG: yieL COG2382 # Protein_GI_number: 16131587 # Func_class: P Inorganic ion transport and metabolism # Function: Enterochelin esterase and related enzymes # Organism: Escherichia coli K12 # 1 389 12 400 400 761 98.0 0 MNIKIAALTLAIASGISAQWAIAADMPASPAPTIPVKQYVTQVNADNSVTFRYFAPGAKN VSVVVGVPVLDNIHPMTKDEAGVWSWRTPILKGNLYEYFFNVDGVRSIDTGTAMTKPQRQ VNSSMILVPGSYLDTRSVAHGDLIAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFY HGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVF YPLNAKAADRELMNDIIPLISKRFNVSKDADGRALAGLSQGGYQALVSGMNHLESFGWLA TFSGVTTTTVPDEGVAARLNDPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKIK FDYQEYPGLNHEMDVWRPAYAAFVQKLFK >gi|299857050|gb|ADWS01000014.1| GENE 44 47436 - 48158 791 240 aa, chain + ## HITS:1 COG:yieK KEGG:ns NR:ns ## COG: yieK COG0363 # Protein_GI_number: 16131586 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli K12 # 24 232 1 209 213 434 100.0 1e-122 MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLTTLVKGKPWYDNC YFYNFDEIPFRGKEGEGVTITNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLD LVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVAHGELGGDFSLVPDSYVTMGP KSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALG >gi|299857050|gb|ADWS01000014.1| GENE 45 48220 - 48807 182 195 aa, chain - ## HITS:1 COG:yieJ KEGG:ns NR:ns ## COG: yieJ COG3196 # Protein_GI_number: 16131585 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 195 1 195 195 371 98.0 1e-103 MTQNIRPLPQFKYHPKPLETGAFEQDKTVECDCCEQQTSVYYSGPFYCVDEVEHLCPWCI ADGSAAEKFAGSFQDDASIEGVEFEYDEEDEFAGIKNTYPDEMLKELVERTPGYHGWQQE FWLAHCGDFCAFIGYVGWNDIKDRLDEFANLEEDCENFGIRNSDLAKCLQKGGDCQGYLF RCLHCGKLRLWGDFS >gi|299857050|gb|ADWS01000014.1| GENE 46 48856 - 49329 253 157 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4442 NR:ns ## KEGG: ECO103_4442 # Name: cbrB # Def: putative inner membrane protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 157 1 157 157 259 100.0 1e-68 MSVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLVLLRRIQVLPLFLLLSITTGVIP ALLTGVMVACLPEKIGSQKNYRCLAGGIGGVVITEIYCAVIVHIKGMASSELFENILSGD SLVVRIIPALLAGVVMSRIITRLPGLDISCPETDSLS >gi|299857050|gb|ADWS01000014.1| GENE 47 49396 - 50061 664 221 aa, chain - ## HITS:1 COG:yieH KEGG:ns NR:ns ## COG: yieH COG0637 # Protein_GI_number: 16131583 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli K12 # 1 221 1 221 221 466 99.0 1e-131 MSQIEAVFFDCDGTLVDSEVICSRAYVTMFQEFGITLDPEEVFKRFKGVKLYEIIDIVSL EHGVTLAKTEAEHVYRAEVARLFDSELEAIEGAGALLSAITAPMCVVSNGPNNKMQHSMG KLNMLHYFPDKLFSGYDIQRWKPDPALMFHAAKAMNVNVENCILVDDSVAGAQSGIDAGM EVFYFCADPHNKPIVHPKVTTFTHLSQLPELWKARGWDITA >gi|299857050|gb|ADWS01000014.1| GENE 48 50228 - 51565 1591 445 aa, chain + ## HITS:1 COG:STM3851 KEGG:ns NR:ns ## COG: STM3851 COG2252 # Protein_GI_number: 16767135 # Func_class: R General function prediction only # Function: Permeases # Organism: Salmonella typhimurium LT2 # 1 445 43 487 487 736 96.0 0 MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDT SAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVVVQAMGLPWQVGMGAIFWG AIGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGLKNAGVIVANPETLVSIGNL TSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSI SSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAG ALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSITEGIALGFISYCVMKIGTGR LRDLSPCVIIVALLFILKIVFIDAH >gi|299857050|gb|ADWS01000014.1| GENE 49 51619 - 52185 741 188 aa, chain - ## HITS:1 COG:ECs4650 KEGG:ns NR:ns ## COG: ECs4650 COG0431 # Protein_GI_number: 15833904 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 364 100.0 1e-101 MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFP ATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGV IGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQTGEVIDQGTLDHLTGQLTAFG EFIQRVKI >gi|299857050|gb|ADWS01000014.1| GENE 50 52207 - 52968 510 253 aa, chain - ## HITS:1 COG:yieE KEGG:ns NR:ns ## COG: yieE COG2091 # Protein_GI_number: 16131580 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Escherichia coli K12 # 1 253 1 253 253 517 99.0 1e-147 MERKMATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRGLLAELMFMLYGI GELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLDMELQRATRGFHSPH APDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLNDDPRDLQLLPIAGRLK CAHVNHVEALCDAEDVLVWSVAVTPTIEKLSVWEFDGKHGWKSLPDIHSRANNPTSRMMR FAQLSTVKAFSPN >gi|299857050|gb|ADWS01000014.1| GENE 51 53113 - 54072 721 319 aa, chain - ## HITS:1 COG:yidZ KEGG:ns NR:ns ## COG: yidZ COG0583 # Protein_GI_number: 16131579 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 319 1 319 319 584 99.0 1e-167 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPL GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKRIY QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP CVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH NPKIVWLRETIKNLYASMA >gi|299857050|gb|ADWS01000014.1| GENE 52 54047 - 55222 759 391 aa, chain - ## HITS:1 COG:yidY KEGG:ns NR:ns ## COG: yidY COG0477 # Protein_GI_number: 16131578 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 391 1 391 391 660 99.0 0 MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGK VADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDTL DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWAMAMMGIAVLMLSLFILKE TRPASPAASDKPRENSESLLNRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGEY ATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQVLFLAAGITLAVSPSHAVSLFGITL ICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVVGIGAWNMLIGI LIACSIVSLLLIMFVAPGRPVAAHEEIHHHA >gi|299857050|gb|ADWS01000014.1| GENE 53 55354 - 56601 981 415 aa, chain - ## HITS:1 COG:tnaB KEGG:ns NR:ns ## COG: tnaB COG0814 # Protein_GI_number: 16131577 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli K12 # 1 415 1 415 415 731 99.0 0 MTDQAEKKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAFILIIAWFSMLHSGLLL LEANLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTYAYISANGAIISETISMNL GYHANPRIVGICTAIFVASVLWISSLAASRITSLFLGLKIISFVIVFGSFFFQVDYSILR DATSTTAGTSYFPYIFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGSLLALVI YLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLGTKQHGIIEFCLLVFSNLAVASSFF GVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPPALLYLIFPNGFIYGIGGAGLCATIWA VIIPAVLAIKARKKFPNQMFTVWGGNLIPAIVILFGITVILCWFGNVFNVLPKFG >gi|299857050|gb|ADWS01000014.1| GENE 54 56692 - 58107 1912 471 aa, chain - ## HITS:1 COG:tnaA KEGG:ns NR:ns ## COG: tnaA COG3033 # Protein_GI_number: 16131576 # Func_class: E Amino acid transport and metabolism # Function: Tryptophanase # Organism: Escherichia coli K12 # 1 471 6 476 476 973 100.0 0 MENFKHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVT QSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQE KGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGI EEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQ REAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVV QEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAA FVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRL TIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV >gi|299857050|gb|ADWS01000014.1| GENE 55 58645 - 60009 1564 454 aa, chain - ## HITS:1 COG:thdF KEGG:ns NR:ns ## COG: thdF COG0486 # Protein_GI_number: 16131574 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 1 454 1 454 454 860 99.0 0 MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPRYADYLPFKDADGSVLD QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE IDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR TGEGVEVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK >gi|299857050|gb|ADWS01000014.1| GENE 56 60115 - 61761 1922 548 aa, chain - ## HITS:1 COG:yidC KEGG:ns NR:ns ## COG: yidC COG0706 # Protein_GI_number: 16131573 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Escherichia coli K12 # 1 548 1 548 548 1064 100.0 0 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKL ISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQFIYQAQSGLTGRDGP DNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNV QNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIAD NENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAAIGYKSQPVLVQPGQT GAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIII ITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPL GGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYILPILMGVTMFFIQK MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGL HSREKKKS >gi|299857050|gb|ADWS01000014.1| GENE 57 61985 - 62311 235 108 aa, chain - ## HITS:1 COG:rnpA KEGG:ns NR:ns ## COG: rnpA COG0594 # Protein_GI_number: 16131572 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Escherichia coli K12 # 1 108 12 119 119 190 99.0 5e-49 MLTPSQFTFVFQQPQRAGTPQITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRE SFRLRQHELPAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS >gi|299857050|gb|ADWS01000014.1| GENE 58 62361 - 62501 228 46 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15804297|ref|NP_290336.1| 50S ribosomal protein L34 [Escherichia coli O157:H7 EDL933] # 1 46 1 46 46 92 100 9e-18 MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK >gi|299857050|gb|ADWS01000014.1| GENE 59 63108 - 64511 1227 467 aa, chain + ## HITS:1 COG:dnaA KEGG:ns NR:ns ## COG: dnaA COG0593 # Protein_GI_number: 16131570 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Escherichia coli K12 # 1 467 1 467 467 931 100.0 0 MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNIN GLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVAQTQPQRAAPSTRSGWDNV PAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTH LLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFF ANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELE TRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVR EALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNH SLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS >gi|299857050|gb|ADWS01000014.1| GENE 60 64516 - 65616 1248 366 aa, chain + ## HITS:1 COG:ECs4636 KEGG:ns NR:ns ## COG: ECs4636 COG0592 # Protein_GI_number: 15833890 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 729 100.0 0 MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLD DWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC SMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGR FPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQE EAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYV VMPMRL >gi|299857050|gb|ADWS01000014.1| GENE 61 65616 - 66689 740 357 aa, chain + ## HITS:1 COG:ECs4635 KEGG:ns NR:ns ## COG: ECs4635 COG1195 # Protein_GI_number: 15833889 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 357 1 357 357 712 99.0 0 MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV IRHDQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE GFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRPWDKE LIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFER DRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL IDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD >gi|299857050|gb|ADWS01000014.1| GENE 62 66718 - 69132 3079 804 aa, chain + ## HITS:1 COG:ECs4634 KEGG:ns NR:ns ## COG: ECs4634 COG0187 # Protein_GI_number: 15833888 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Escherichia coli O157:H7 # 1 804 1 804 804 1588 100.0 0 MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEII VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV SVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVT EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY LLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG KQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERR YPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLF EPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFE QALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTL MGDAVEPRRAFIEENALKAANIDI >gi|299857050|gb|ADWS01000014.1| GENE 63 69372 - 69770 538 132 aa, chain + ## HITS:1 COG:ECs4633 KEGG:ns NR:ns ## COG: ECs4633 COG3753 # Protein_GI_number: 15833887 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 132 4 135 135 214 98.0 4e-56 MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQGNQS VSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVSPQANNDLLS AGMELLKGKLFR >gi|299857050|gb|ADWS01000014.1| GENE 64 69885 - 70697 1140 270 aa, chain + ## HITS:1 COG:yidA KEGG:ns NR:ns ## COG: yidA COG0561 # Protein_GI_number: 16131565 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 270 1 270 270 523 99.0 1e-148 MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME QPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANR DISYYTVHESFVATIPLVFCEAEKMDPNTQLLKVMMIDEPAILDQAIARIPQEVKEKYTV LKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAMDNA IPSVKEVANFVTKSNLEDGVAFAIEKYVLN >gi|299857050|gb|ADWS01000014.1| GENE 65 70743 - 71399 287 218 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_4205 NR:ns ## KEGG: EcE24377A_4205 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 218 36 253 253 441 99.0 1e-123 MKLNFKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQSDTITGLSQTKDSNGT KGYVFVGESLDYLITDGADDIVKMLNDPALNRHNIQVADDARFVLNAGKKKFTGTISLYY YWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKNMDYSKVMAFYHPFKVRFYEY YSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ >gi|299857050|gb|ADWS01000014.1| GENE 66 71677 - 72366 656 229 aa, chain + ## HITS:1 COG:STM3830 KEGG:ns NR:ns ## COG: STM3830 COG2186 # Protein_GI_number: 16767115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 409 94.0 1e-114 MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFRSLMAKRLIEM KRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVRNLVEPAIARWAAERATSS DLAQIESALNEMIANNQDREAFNEADIRYHEAVLQSVHNPVLQQLSIAISSLQRAVFERT WMGDEANMPQTLQEHKALFDAIRHQDGDAAEQAALTMIASSTRRLKEIT >gi|299857050|gb|ADWS01000014.1| GENE 67 72363 - 73241 530 292 aa, chain + ## HITS:1 COG:dgoK KEGG:ns NR:ns ## COG: dgoK COG3734 # Protein_GI_number: 16131561 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Escherichia coli K12 # 1 292 1 292 292 544 97.0 1e-155 MTARYIAIDWGSTNLRAWLYQGDHCLESRQSEAGVTRLNGKSPAAVLAEVTTDWREENTP VVMAGMVGSNVGWKVAPYLSVPARFSSIGEQLTSVGDNIWIIPGLCVSHDDNHNVMRGEE TQLIGARTLAPSSLYVMPGTHCKWVQADSQQINDFRTVMTGELHHLLLNHSLIGAGLPPQ ENSADAFAAGLERGLNAPAILPQLFEVRASHVLGTLPREQVSEFLSGLLIGAEVASMRDY VTHQHAITLVAGTSLTARYQQAFQAMGCDVTAVAGDTAFQAGIRSIAHAVAN >gi|299857050|gb|ADWS01000014.1| GENE 68 73225 - 73842 561 205 aa, chain + ## HITS:1 COG:RSc2752 KEGG:ns NR:ns ## COG: RSc2752 COG0800 # Protein_GI_number: 17547471 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Ralstonia solanacearum # 1 201 3 203 213 239 62.0 3e-63 MQWQTKLPLIAILRGIKPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKA LIGAGTVLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEA GAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLY RAGQSVERTAQQAAAFVKAYREAVQ >gi|299857050|gb|ADWS01000014.1| GENE 69 73839 - 74987 1538 382 aa, chain + ## HITS:1 COG:dgoA_2 KEGG:ns NR:ns ## COG: dgoA_2 COG4948 # Protein_GI_number: 16131560 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 382 96 477 477 799 100.0 0 MKITKITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHELGDYLIGQDPSRI NDLWQVMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWV GGDRPADVIDGIKTLREIGFDTFKLNGCEELGLIDNSRAVDAAVNTVAQIREAFGNQIEF GLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPKLAAQTHIPLAAGERMFSR FDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHID FVSYNAVLQEQSMGIHYNKGAELLDFVKNKEDFSMVGGFFKPLTKPGLGVEIDEAKVIEF SKNAPDWRNPLWRHEDNSVAEW >gi|299857050|gb|ADWS01000014.1| GENE 70 75107 - 76399 1337 430 aa, chain + ## HITS:1 COG:dgoT KEGG:ns NR:ns ## COG: dgoT COG0477 # Protein_GI_number: 16131559 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 430 16 445 445 801 99.0 0 MDIPVNAAKPGRRRYLTLVMIFITVVICYVDRANLAVASAHIQEEFGITKAEMGYVFSAF AWLYTLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFATGLMSLIGLRAITGIFEAP AFPTNNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIG IIWSLIWFKVYQPPRLTKGISKAELDYIRDGGGLVDGDAPVKKEARQPLTAKDWKLVFHR KLIGVYLGQFAVASTLWFFLTWFPNYLTQEKGITALKAGFMTTVPFLTAFVGVLLSGWVA DLLVRKGFSLGFARKTPIICGLLISTCIMGANYTNDPMMIMCLMALAFFGNGFASITWSL VSSLAPMRLIGLTGGVFNFAGGLGGITVPLVVGYLAQGYGFAPALVYISAVALIGALSYI LLVGDVKRVG >gi|299857050|gb|ADWS01000014.1| GENE 71 76396 - 77478 578 360 aa, chain - ## HITS:1 COG:yidS KEGG:ns NR:ns ## COG: yidS COG0644 # Protein_GI_number: 16131558 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli K12 # 1 360 2 361 361 753 98.0 0 MNVSEKMEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDA QRSFIRDGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPTS VEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRHLYPDHQIRKY VAIQQWFAEKHPVPFYSCIFDNSITNCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKM SAFQFQFGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAD ILRAVLLKQPEKLNTAYWRATRKLRLKLFGKIVKSRCLTAPALRKWIMRSGMAHIPQLKD >gi|299857050|gb|ADWS01000014.1| GENE 72 77525 - 78775 898 416 aa, chain + ## HITS:1 COG:no KEGG:ECSE_3975 NR:ns ## KEGG: ECSE_3975 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 416 1 416 416 841 99.0 0 MMAGTVLYQDRAMKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIH TGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIAEGGKVSN LDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGP VNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGE KVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPR YWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGF VLDNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMEGGQLWITETDR >gi|299857050|gb|ADWS01000014.1| GENE 73 78777 - 79040 276 87 aa, chain - ## HITS:1 COG:ECs4628 KEGG:ns NR:ns ## COG: ECs4628 COG5645 # Protein_GI_number: 15833882 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 87 49 135 135 167 98.0 5e-42 MMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSS VRSRVEKSEANAQATNAVIPPARMPDN >gi|299857050|gb|ADWS01000014.1| GENE 74 79415 - 79828 581 137 aa, chain + ## HITS:1 COG:ECs4627 KEGG:ns NR:ns ## COG: ECs4627 COG0071 # Protein_GI_number: 15833881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 256 100.0 7e-69 MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDENHYRIAIAVAGFAESE LEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRGANLVNGLLYID LERVIPEAKKPRRIEIN >gi|299857050|gb|ADWS01000014.1| GENE 75 79940 - 80368 542 142 aa, chain + ## HITS:1 COG:ECs4626 KEGG:ns NR:ns ## COG: ECs4626 COG0071 # Protein_GI_number: 15833880 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Escherichia coli O157:H7 # 1 142 3 144 144 275 100.0 2e-74 MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNHYRITLALAGFRQEDLE IQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAENMEVSGATFVNGLLHIDLI RNEPEPIAAQRIAISERPALNS >gi|299857050|gb|ADWS01000014.1| GENE 76 80565 - 82226 1839 553 aa, chain + ## HITS:1 COG:ECs4625 KEGG:ns NR:ns ## COG: ECs4625 COG2985 # Protein_GI_number: 15833879 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 553 9 561 561 985 100.0 0 MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVGHFVSQAGMTLSSDMLH VIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVIIGGLVTAILHKLFDIPLP VVLGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSYAMAYPFGICGILFTMWMLRV IFRVNVETEAQQHESSRTNGGALIKTINIRVENPNLHDLAIKDVPILNGDKIICSRLKRE ETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQEVDTSLSTKGTDLRVERVVVTNEN VLGKRIRDLHFKERYDVVISRLNRAGVELVASGDISLQFGDILNLVGRPSAIDAVANVLG NAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVPGFPAALKLGLAGGPLIMALILGRIGSIG KLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFVNTLVNGEGLSWIGYGALITAVPLIT VGILARMLAKMNYLTMCGMLAGSMTDPPALAFANNLHPTSGAAALSYATVYPLVMFLRII TPQLLAVLFWSIG >gi|299857050|gb|ADWS01000014.1| GENE 77 82223 - 82939 514 238 aa, chain - ## HITS:1 COG:yidP KEGG:ns NR:ns ## COG: yidP COG2188 # Protein_GI_number: 16131552 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 238 1 238 238 448 100.0 1e-126 MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRKAIDLLVAWGLVVRRHG SGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMPAPPAIASQLRIQINEQIY FSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKFEYIEQECGILIGGNYESLTPVL ADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMFRNASEYQVEYHLRRLHPEKS >gi|299857050|gb|ADWS01000014.1| GENE 78 83235 - 84851 1771 538 aa, chain + ## HITS:1 COG:glvCm_1 KEGG:ns NR:ns ## COG: glvCm_1 COG1263 # Protein_GI_number: 16132269 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 447 88 534 534 849 99.0 0 MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVRESLTDPNSLFAQIVHIIEEGG WTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFINAMGMTWGSYFGVDFTQD AVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDKKLPVFLGIFQGTSYVVIIAF LVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHHFIYGQFI FGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGGFALHGNSKIFGAVGISLAMYFTAA PENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAASMSTVMYLFGVVG NMGGGLIDQVLPQNWIPMFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGRED AEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSINNCATRLRIALHDM SQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITEAV >gi|299857050|gb|ADWS01000014.1| GENE 79 84851 - 85489 547 212 aa, chain + ## HITS:1 COG:glvG KEGG:ns NR:ns ## COG: glvG COG1486 # Protein_GI_number: 16131551 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli K12 # 1 212 1 212 212 444 100.0 1e-125 MTKFSVVVAGGGSTFTPGIVLMLLANQDRFPLRALKFYDNDGARQEVIAEACKVILKEKA PDIAFSYTTDPEVAFSDVDFVMAHIRVGKYPMRELDEKIPLRHGVVGQETCGPGGIAYGM RSIGGVLELVDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNAKILNICDMPIGIESRMA QIVGLQDRKQMRVRYYGLNHWWSAISRSFRKG >gi|299857050|gb|ADWS01000014.1| GENE 80 85453 - 85665 224 70 aa, chain + ## HITS:1 COG:Z5177 KEGG:ns NR:ns ## COG: Z5177 COG1486 # Protein_GI_number: 15804281 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 EDL933 # 1 70 371 440 440 141 98.0 4e-34 MVGDIPQFQKGLMSQQVAVEKLVVDAWEQRSYQHLWQAITLSKTVPSASVAKAILDELLE ANKAYWPELR >gi|299857050|gb|ADWS01000014.1| GENE 81 85662 - 86273 391 203 aa, chain - ## HITS:1 COG:yidL KEGG:ns NR:ns ## COG: yidL COG2207 # Protein_GI_number: 16131550 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 203 105 307 307 428 100.0 1e-120 MDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIK NNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSE AWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHK FGYAPSAVLKNTDQHPTDASPHN >gi|299857050|gb|ADWS01000014.1| GENE 82 86409 - 86555 169 48 aa, chain - ## HITS:1 COG:yidL KEGG:ns NR:ns ## COG: yidL COG2207 # Protein_GI_number: 16131550 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 48 11 58 307 100 100.0 8e-22 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVI >gi|299857050|gb|ADWS01000014.1| GENE 83 86722 - 88437 1772 571 aa, chain + ## HITS:1 COG:yidK KEGG:ns NR:ns ## COG: yidK COG4146 # Protein_GI_number: 16131549 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Escherichia coli K12 # 1 571 1 571 571 1048 99.0 0 MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQ LVGLSGQAYKSGMSMMGWEVTSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRII IDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHGAAIWLLVILLGLAGILYAVI GGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSIGGPTD PLPIGAAFTGLILVNTFYWCTNQDIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPG LIAFHLYQDLPKADMAYPTLVNNVLPVPMVGFFGAVLFGAVISTFNGFLNSASTLFSMGI YRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAPQGLYSWMKQLNGIYNVPLVT IIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFI AAVVIVYLIFDSWRHRHDPAVTFTPDAKDSL >gi|299857050|gb|ADWS01000014.1| GENE 84 88434 - 89927 1255 497 aa, chain + ## HITS:1 COG:yidJ KEGG:ns NR:ns ## COG: yidJ COG3119 # Protein_GI_number: 16131548 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Escherichia coli K12 # 1 497 1 497 497 1042 98.0 0 MKRPNFLFIMTDTQATNMVGCYSGKPLNTHNIDSLAAEGIRFNSAYTCSPVCTPARAGLF TGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDA DYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARA EEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYELGEKAQDDLANKPEHHRLWAQAMPSPV GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAA MYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRG VMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDSNEMHNLIDDIRF ADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDARPRWMGAFRPRPQDGYSPVVRDYD TGLPTQGVKVEDKKQKF >gi|299857050|gb|ADWS01000014.1| GENE 85 89974 - 90384 365 136 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4146 NR:ns ## KEGG: EC55989_4146 # Name: yidI # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_55989 # Pathway: not_defined # 1 136 14 149 149 217 100.0 1e-55 MLFGAIALMMGIIHFSFGPFSAPPPTFESIVADKTAEIKRGLLAGIKGEKITTVEKKEDV DVDKILDQSGIALAIAALLCAFIGGMRKENRWGIRGALVFGGGTLAFHTLLFGIGIVCSI LLIFLIFSFLTGGSLV >gi|299857050|gb|ADWS01000014.1| GENE 86 90533 - 90880 468 115 aa, chain + ## HITS:1 COG:ECs4617 KEGG:ns NR:ns ## COG: ECs4617 COG2149 # Protein_GI_number: 15833871 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 115 1 115 115 190 100.0 7e-49 MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPVIRELLALLLC LFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG >gi|299857050|gb|ADWS01000014.1| GENE 87 90870 - 91232 226 120 aa, chain + ## HITS:1 COG:no KEGG:ECO111_4500 NR:ns ## KEGG: ECO111_4500 # Name: yidG # Def: putative inner membrane protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 120 1 120 120 221 100.0 8e-57 MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWHQAGMLFWISIGILAIV ALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAILFAVTHIHQLIVFIERVA >gi|299857050|gb|ADWS01000014.1| GENE 88 91229 - 91726 374 165 aa, chain + ## HITS:1 COG:yidF KEGG:ns NR:ns ## COG: yidF COG0641 # Protein_GI_number: 16131544 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli K12 # 1 165 1 165 165 339 99.0 1e-93 MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLIPYLEFDDRGDLTAASV TAELWGKFLIALFECWVRADISRISIELFDATLQKWCGSENPQPRRDCQACDWHRLCPHA RQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMELMTMLR >gi|299857050|gb|ADWS01000014.1| GENE 89 91734 - 92885 1169 383 aa, chain - ## HITS:1 COG:ECs4614 KEGG:ns NR:ns ## COG: ECs4614 COG0477 # Protein_GI_number: 15833868 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 9 383 22 396 396 619 100.0 1e-177 MLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVG RRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLR HANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDA PRTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFIL PIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFF GAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTL MGLLIVLCWLPLATRMSHQGQPV >gi|299857050|gb|ADWS01000014.1| GENE 90 93337 - 93426 99 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLVDIAILILKLIVAALQLLDAVLKYLK >gi|299857050|gb|ADWS01000014.1| GENE 91 94194 - 95882 1860 562 aa, chain + ## HITS:1 COG:ECs4612 KEGG:ns NR:ns ## COG: ECs4612 COG0028 # Protein_GI_number: 15833866 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 562 1 562 562 1102 99.0 0 MASSGTTSTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYDALSQSTQIRHILARHE QGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDSIPLICITGQVPASMIGTD AFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQSGRPGPVWIDIPKDVQTAVFE IETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYLGGGVINAPARVRELAEKAQLPT TMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEADLLIVLGARFDDRAIGKTEQFCPN AKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQLIPQVEAQPRAEWHQLVADLQREFPCP IPKACDPLSHYGLINAVAACVDDNAIITTDVGQHQMWTAQAYPLNRPRQWLTSGGLGTMG FGLPAAIGAALANPDRKVLCFSGDGSLMMNIQEMATASENQLDVKIILMNNEALGLVHQQ QSLFYEQGVFAATYPGKINFMQIAAGFGLETCDLNNEADPQAALQEIINRPGPALIHVRI DAEEKVYPMVPPGAANTEMVGE >gi|299857050|gb|ADWS01000014.1| GENE 92 95886 - 96176 320 96 aa, chain + ## HITS:1 COG:ECs4611 KEGG:ns NR:ns ## COG: ECs4611 COG0440 # Protein_GI_number: 15833865 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 183 98.0 9e-47 MQNTTHNNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQDSDKSHIWLLVNDDQ RLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ >gi|299857050|gb|ADWS01000014.1| GENE 93 96251 - 96841 771 196 aa, chain + ## HITS:1 COG:ECs4606 KEGG:ns NR:ns ## COG: ECs4606 COG2197 # Protein_GI_number: 15833860 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 375 100.0 1e-104 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL GVSNDVELARRMFDGW >gi|299857050|gb|ADWS01000014.1| GENE 94 96952 - 98343 1082 463 aa, chain + ## HITS:1 COG:uhpB KEGG:ns NR:ns ## COG: uhpB COG3851 # Protein_GI_number: 16131538 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, glucose-6-phosphate specific # Organism: Escherichia coli K12 # 1 463 39 501 501 773 100.0 0 MAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPV ALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLV FWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLAL PIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLR ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHL EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP PGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV >gi|299857050|gb|ADWS01000014.1| GENE 95 98353 - 99672 1251 439 aa, chain + ## HITS:1 COG:uhpC KEGG:ns NR:ns ## COG: uhpC COG2271 # Protein_GI_number: 16131537 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli K12 # 1 439 2 440 440 805 99.0 0 MLPFLKAPADAPLMTDKYEIDARYRYWRRHILLTIWLGYALFYFTRKSFNAAVPEILANG VLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIMNILFGFSTSLWA FAMLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWNTAHNVGGALIPIVMAASALH YGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVGEWRHDALEIAQQQEGAGLTRKE ILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLYMSETLGVDLVTANTAVTMFELGGF IGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQATCFFTIGFFVFG PQMLIGMAAAECSHKEAAGAATGFVGLFAYLGASLAGWPLAKVLDTWHWSGFFVVISIAA GISALLLLPFLNAQAPREA >gi|299857050|gb|ADWS01000014.1| GENE 96 99810 - 101201 1726 463 aa, chain + ## HITS:1 COG:ECs4603 KEGG:ns NR:ns ## COG: ECs4603 COG2271 # Protein_GI_number: 15833857 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 845 100.0 0 MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTY GLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGS VSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTFLGFWNISHNLGGAGAAGVAL FGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKET ESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRIGIDQWSTVYAFQELKLSKAVAIQG FTLFEAGALVGTLLWGWLSDLANGRRGLVACIALALIIATLGVYQHASNEYIYLASLFAL GFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGDSFAKLGLGMIADGTPVFGLT GWAGTFAALDIAAIGCICLMAIVAVMEERKIRREKKIQQLTVA >gi|299857050|gb|ADWS01000014.1| GENE 97 101246 - 103012 1617 588 aa, chain - ## HITS:1 COG:yicP KEGG:ns NR:ns ## COG: yicP COG1001 # Protein_GI_number: 16131535 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Escherichia coli K12 # 1 588 1 588 588 1198 99.0 0 MNNSINHKFHHISRAEYQELLAVSRGDAVADYIIDNVSILDLINGGEISGPIVIKGRYIA GVGAEYADAPALQRIDARGATAVPGFIDAHLHIESSMMTPVTFETATLPRGLTTVICDPH EIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQV TGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGLGGKELNAYITAGIENCHESYQL EEGRRKLQLGMSLMIREGSAARNLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHIDAL IRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGLLAPGKQADIVLLSDARKVTVQQVLVK GEPIDAQTLQAEESARLAQSAPPYGNTIARQPVSASDFALQFTPGKRYRVIDVIHNELIT HSHSSVYSENGFDRDDVSFIAVLERYGQRLAPACGLLGGFGLNEGALAATVSHDSHNIVV IGRSAEEMALAVNQVIQDGGGLCVVRNGQVQSHLPLPIAGLMSTDTAQSLAEQIDALKAA ARECGPLPDEPFIQMAFLSLPVIPALKLTSQGLFDGEKFAFTTLEVTE >gi|299857050|gb|ADWS01000014.1| GENE 98 103109 - 104521 1255 470 aa, chain + ## HITS:1 COG:yicO KEGG:ns NR:ns ## COG: yicO COG2252 # Protein_GI_number: 16131534 # Func_class: R General function prediction only # Function: Permeases # Organism: Escherichia coli K12 # 1 470 1 470 470 804 99.0 0 MIIITEPLLSFVLQKQGIKSPPMDKKMNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELI AGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMG LNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIG LFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVV TSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLI GVTDKAGLIDSNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTA VVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVM MPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD >gi|299857050|gb|ADWS01000014.1| GENE 99 104574 - 105026 387 150 aa, chain + ## HITS:1 COG:no KEGG:APECO1_2789 NR:ns ## KEGG: APECO1_2789 # Name: yicN # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 150 10 159 159 290 100.0 9e-78 MIWIMLATLAVVFVVGFRVLTSGARKAIRRLSDRLNIDVVPVESMVDQMGKSAGDEFLRY LHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKARLAAPITDAQVRLALGFLR ETEPEMQDINAFQMRYNAFFQPAEGVHWLH >gi|299857050|gb|ADWS01000014.1| GENE 100 105237 - 106427 1108 396 aa, chain + ## HITS:1 COG:yicM KEGG:ns NR:ns ## COG: yicM COG2814 # Protein_GI_number: 16131532 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 396 56 451 451 667 100.0 0 MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQS VTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGL ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAA AVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIR PVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTL WGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIG GYALDNIGLTSPLMLSGTLMLLTALLVTAKVKMKKS >gi|299857050|gb|ADWS01000014.1| GENE 101 106468 - 106761 267 97 aa, chain - ## HITS:1 COG:no KEGG:SSON_3614 NR:ns ## KEGG: SSON_3614 # Name: not_defined # Def: putative transport protein # Organism: S.sonnei # Pathway: not_defined # 1 97 1 97 97 187 100.0 9e-47 MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLM LSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM >gi|299857050|gb|ADWS01000014.1| GENE 102 106983 - 107801 733 272 aa, chain + ## HITS:1 COG:nlpA KEGG:ns NR:ns ## COG: nlpA COG1464 # Protein_GI_number: 16131531 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 1 272 1 272 272 503 100.0 1e-142 MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGL DVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSK KIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQI MELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKN AENVKEFLQSYQSPEVAKAAETIFNGGAVPGW >gi|299857050|gb|ADWS01000014.1| GENE 103 107805 - 108728 698 307 aa, chain - ## HITS:1 COG:yicL KEGG:ns NR:ns ## COG: yicL COG0697 # Protein_GI_number: 16131530 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 307 1 307 307 493 99.0 1e-139 MGSTRKGMLNVLIAAVLWGSSGVYAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGD KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARKI NRPARHE >gi|299857050|gb|ADWS01000014.1| GENE 104 108839 - 110023 597 394 aa, chain - ## HITS:1 COG:setC KEGG:ns NR:ns ## COG: setC COG0477 # Protein_GI_number: 16131529 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 394 1 394 394 711 99.0 0 MQKTATTPSKILDLTAAAFLLVAFLTGIAGALQTPTLSIFLADELKARPIMVGFFFTGSA IMGILVSQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNRNYFILLSTGVLLSSFAST ANPQMFALAREHADRTGRETVMFSTFLRAQISLAWVIGPPLAYELAMGFSFKVMYLTAAI AFVVCGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRDTRLLFVVCSMMWAANNLYMINM PLFIIDELHLTDKLAGEMIGIAAGLEIPMMLIAGYYMKRIGKRLLMLIAIVSGMCFYASV LMATTPAVELELQILNAIFLGILCGIGMLYFQDLMPEKIGSATTLYANTSRVGWIIAGSV DGIMVEIWSYHALFWLAIGMLGIAMICLLFIKDI >gi|299857050|gb|ADWS01000014.1| GENE 105 110790 - 111110 250 106 aa, chain - ## HITS:1 COG:no KEGG:JW2627 NR:ns ## KEGG: JW2627 # Name: ypjF # Def: toxin of the YpjF-YfjZ toxin-antitoxin system # Organism: E.coli_J # Pathway: not_defined # 1 98 1 98 109 155 76.0 3e-37 MKTQPATTPQAAKPCLSPLAVWQMLLTSLLDQHYGLTLNDTPFSDETVIQKHIEAGITLA DAVNFLVERYELVRIDQKGFSVQDQEPWLTSMDVHRARFKLNVERL >gi|299857050|gb|ADWS01000014.1| GENE 106 111131 - 111457 176 108 aa, chain - ## HITS:1 COG:no KEGG:ECL_03717 NR:ns ## KEGG: ECL_03717 # Name: not_defined # Def: putative antitoxin module of toxin-antitoxin system # Organism: E.cloacae # Pathway: not_defined # 9 108 6 105 105 181 84.0 1e-44 MSLIPAHEWGLQREIVPRFGARLVQEGNRLHYLADRANLMGNFSDTECFKLNDAFPHFIS QMESMLTTGELIPCHHHCVTLYHNGFTCEADTLGSCGYVYIAVYPTQR >gi|299857050|gb|ADWS01000014.1| GENE 107 111470 - 111940 348 156 aa, chain - ## HITS:1 COG:yfjY KEGG:ns NR:ns ## COG: yfjY COG2003 # Protein_GI_number: 16130559 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli K12 # 8 156 11 160 160 158 58.0 4e-39 MSAPNLFPEFPVNEQRVIQRALRLLEKYQRQPSESFTSTSVTKAWLQLRMAHLEREAFIV MYLDNQHCLLEREILFIGTLSHTEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK HMTQRIVKALALVEVRVLDHLVVGNETISFAELGLL >gi|299857050|gb|ADWS01000014.1| GENE 108 112009 - 112581 358 190 aa, chain - ## HITS:1 COG:no KEGG:YPK_3134 NR:ns ## KEGG: YPK_3134 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_YPIII # Pathway: not_defined # 1 190 84 273 273 376 96.0 1e-103 MLRLRREGQITGKQVPEIILLNSHDGSSSYQMLPGLFRSVCQNGLICGESFGEVRVPHKG NVVEKVIEGAYEILGIFDRVEEKRDAMQSLMLPPPAQHAIAKAALTYRFGEEHQPVTESQ ILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRTIKGKRAHTRAVKGIDGDVKLNRALWV MAENMLQFAS >gi|299857050|gb|ADWS01000014.1| GENE 109 112582 - 112764 63 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFGVLSLTQISHSGLAGKERLKTLALKVIEEGNSRDVCVTLTAGFMLFLTEDTRNVMCQL >gi|299857050|gb|ADWS01000014.1| GENE 110 112768 - 112974 133 68 aa, chain - ## HITS:1 COG:Z5089 KEGG:ns NR:ns ## COG: Z5089 COG2801 # Protein_GI_number: 15804202 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 68 158 225 225 132 91.0 1e-31 MERFFRSLKTEWVPTNGYAGKDEARQQINDYILNYYNSVRPHHYNGGLTPEESENRYHFY CKTVANIT Prediction of potential genes in microbial genomes Time: Sun May 15 22:14:29 2011 Seq name: gi|299857049|gb|ADWS01000015.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont14.1, whole genome shotgun sequence Length of sequence - 102968 bp Number of predicted genes - 87, with homology - 86 Number of transcription units - 59, operones - 17 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 61 - 191 98.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. - Term 363 - 394 2.5 1 1 Tu 1 . - CDS 473 - 916 360 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 936 - 995 3.5 + Prom 892 - 951 4.4 2 2 Tu 1 . + CDS 1073 - 2002 908 ## COG1897 Homoserine trans-succinylase + Term 2048 - 2076 1.0 + Prom 2088 - 2147 7.7 3 3 Op 1 7/0.050 + CDS 2271 - 3872 1580 ## COG2225 Malate synthase 4 3 Op 2 5/0.200 + CDS 3902 - 5206 1555 ## COG2224 Isocitrate lyase + Term 5429 - 5472 2.1 + Prom 5224 - 5283 2.5 5 4 Tu 1 . + CDS 5487 - 7223 1281 ## COG4579 Isocitrate dehydrogenase kinase/phosphatase 6 5 Tu 1 . - CDS 7192 - 7725 213 ## COG0666 FOG: Ankyrin repeat - Prom 7933 - 7992 4.8 - Term 9034 - 9075 7.8 7 6 Tu 1 . - CDS 9084 - 9908 736 ## COG1414 Transcriptional regulator - Prom 10068 - 10127 3.7 + Prom 9880 - 9939 4.7 8 7 Tu 1 . + CDS 10093 - 13791 4384 ## COG1410 Methionine synthase I, cobalamin-binding domain + Term 13824 - 13860 7.1 + Prom 13809 - 13868 4.3 9 8 Tu 1 . + CDS 14011 - 15642 1687 ## COG1283 Na+/phosphate symporter + Term 15740 - 15776 2.7 - Term 15694 - 15726 3.2 10 9 Tu 1 . - CDS 15733 - 16422 776 ## COG3340 Peptidase E - Prom 16627 - 16686 3.2 + Prom 16555 - 16614 4.3 11 10 Tu 1 . + CDS 16634 - 17506 888 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 12 11 Tu 1 . - CDS 17507 - 17779 362 ## ECH74115_5501 hypothetical protein - Prom 17901 - 17960 5.9 13 12 Op 1 . + CDS 18309 - 19436 1104 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 14 12 Op 2 . + CDS 19442 - 20233 600 ## COG3541 Predicted nucleotidyltransferase 15 13 Tu 1 . - CDS 20269 - 21195 287 ## EC55989_4511 putative zeta toxin; poison-antidote element - Prom 21220 - 21279 5.5 16 14 Tu 1 . - CDS 21340 - 22689 1390 ## COG0527 Aspartokinases + Prom 23120 - 23179 5.4 17 15 Tu 1 . + CDS 23214 - 24863 1981 ## COG0166 Glucose-6-phosphate isomerase + Term 24881 - 24917 7.3 + Prom 25014 - 25073 7.0 18 16 Tu 1 . + CDS 25218 - 25460 176 ## + Term 25532 - 25559 0.1 + Prom 25479 - 25538 2.6 19 17 Op 1 . + CDS 25574 - 26212 701 ## ECO103_4775 putative lipoprotein 20 17 Op 2 . + CDS 26209 - 26946 585 ## EC55989_4516 hypothetical protein 21 17 Op 3 . + CDS 26946 - 29042 2200 ## JW3989 predicted porin + Term 29054 - 29096 1.8 + Prom 29445 - 29504 1.6 22 18 Tu 1 . + CDS 29582 - 29992 581 ## COG3223 Predicted membrane protein + Term 30031 - 30075 1.9 - Term 29986 - 30025 7.3 23 19 Tu 1 . - CDS 30036 - 31511 1501 ## COG0477 Permeases of the major facilitator superfamily - Prom 31634 - 31693 5.3 - Term 31782 - 31812 3.0 24 20 Op 1 20/0.000 - CDS 31883 - 32773 1050 ## COG3833 ABC-type maltose transport systems, permease component 25 20 Op 2 19/0.000 - CDS 32788 - 34332 1584 ## COG1175 ABC-type sugar transport systems, permease components - Prom 34403 - 34462 5.8 - Term 34376 - 34421 2.7 26 20 Op 3 . - CDS 34486 - 35676 1533 ## COG2182 Maltose-binding periplasmic proteins/domains + Prom 35934 - 35993 2.0 27 21 Op 1 5/0.200 + CDS 36041 - 37156 1226 ## COG3839 ABC-type sugar transport systems, ATPase components 28 21 Op 2 . + CDS 37231 - 38568 1612 ## COG4580 Maltoporin (phage lambda and maltose receptor) + Term 38663 - 38713 1.3 + Prom 38576 - 38635 1.8 29 22 Tu 1 . + CDS 38720 - 39640 823 ## ECUMN_4571 maltose regulon periplasmic protein + Term 39673 - 39704 3.2 - Term 39501 - 39535 -0.3 30 23 Tu 1 . - CDS 39615 - 39767 57 ## ECBD_3997 hypothetical protein - Prom 39991 - 40050 6.0 + Prom 39684 - 39743 7.2 31 24 Op 1 3/0.700 + CDS 39869 - 40063 57 ## COG1357 Uncharacterized low-complexity proteins 32 24 Op 2 . + CDS 40121 - 41449 294 ## COG1357 Uncharacterized low-complexity proteins + Prom 41589 - 41648 4.2 33 25 Op 1 6/0.050 + CDS 41672 - 42169 570 ## COG3161 4-hydroxybenzoate synthetase (chorismate lyase) 34 25 Op 2 . + CDS 42182 - 43054 984 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases + Term 43067 - 43096 2.1 - Term 43052 - 43088 5.8 35 26 Tu 1 . - CDS 43209 - 45692 2619 ## COG2937 Glycerol-3-phosphate O-acyltransferase - Prom 45803 - 45862 6.0 + Prom 45544 - 45603 4.0 36 27 Tu 1 . + CDS 45803 - 46171 431 ## COG0818 Diacylglycerol kinase + Term 46184 - 46221 -1.0 + Prom 46194 - 46253 8.2 37 28 Op 1 1/0.900 + CDS 46281 - 46889 576 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Term 46901 - 46940 8.9 38 28 Op 2 . + CDS 46962 - 48287 1309 ## COG0534 Na+-driven multidrug efflux pump 39 29 Tu 1 . + CDS 48403 - 48612 373 ## COG3237 Uncharacterized protein conserved in bacteria 40 30 Tu 1 . - CDS 48654 - 49169 487 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Prom 49270 - 49329 8.2 41 31 Tu 1 . + CDS 49487 - 50509 549 ## EcE24377A_4600 hypothetical protein + Term 50551 - 50584 2.4 + Prom 50614 - 50673 6.1 42 32 Tu 1 . + CDS 50873 - 51910 1143 ## COG0042 tRNA-dihydrouridine synthase + Term 51941 - 51978 7.0 + Prom 51958 - 52017 4.4 43 33 Tu 1 . + CDS 52044 - 52286 400 ## EC55989_4543 phage shock protein G + Term 52419 - 52460 5.4 - Term 52410 - 52443 4.1 44 34 Tu 1 . - CDS 52452 - 53435 840 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 53508 - 53567 1.7 + Prom 53404 - 53463 3.2 45 35 Op 1 9/0.050 + CDS 53518 - 54933 1517 ## COG0305 Replicative DNA helicase 46 35 Op 2 5/0.200 + CDS 54986 - 56065 1005 ## COG0787 Alanine racemase + Prom 56078 - 56137 3.7 47 36 Tu 1 . + CDS 56318 - 57511 1250 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Term 57615 - 57653 -0.5 - Term 57509 - 57544 6.5 48 37 Tu 1 . - CDS 57732 - 58274 297 ## ECIAI1_4286 hypothetical protein + Prom 58416 - 58475 7.2 49 38 Tu 1 . + CDS 58637 - 59350 546 ## COG3700 Acid phosphatase (class B) + Prom 59378 - 59437 3.3 50 39 Op 1 4/0.500 + CDS 59461 - 59877 380 ## COG0432 Uncharacterized conserved protein 51 39 Op 2 . + CDS 59881 - 60237 465 ## COG2315 Uncharacterized protein conserved in bacteria - Term 60234 - 60264 3.4 52 40 Tu 1 . - CDS 60272 - 63094 2947 ## COG0178 Excinuclease ATPase subunit - Prom 63155 - 63214 5.0 + Prom 63262 - 63321 5.6 53 41 Tu 1 . + CDS 63348 - 63884 753 ## COG0629 Single-stranded DNA-binding protein + Term 63957 - 63985 1.4 - Term 63942 - 63976 5.2 54 42 Tu 1 . - CDS 63983 - 64264 258 ## ECSE_4354 hypothetical protein + Prom 64567 - 64626 3.7 55 43 Tu 1 . + CDS 64694 - 66280 1102 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains - Term 66236 - 66277 7.7 56 44 Tu 1 . - CDS 66283 - 66606 296 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 66647 - 66706 5.8 + Prom 66609 - 66668 5.6 57 45 Tu 1 . + CDS 66692 - 67156 428 ## COG0789 Predicted transcriptional regulators + Term 67158 - 67184 -0.7 58 46 Tu 1 . + CDS 67702 - 69051 1502 ## COG2252 Permeases + Term 69067 - 69110 9.2 + Prom 69091 - 69150 3.8 59 47 Tu 1 . + CDS 69203 - 70852 1638 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Term 70881 - 70910 1.4 60 48 Tu 1 . - CDS 71006 - 71749 379 ## COG1357 Uncharacterized low-complexity proteins - Prom 71972 - 72031 5.4 - Term 72429 - 72466 7.8 61 49 Op 1 10/0.000 - CDS 72476 - 74125 2113 ## COG4147 Predicted symporter 62 49 Op 2 5/0.200 - CDS 74122 - 74436 351 ## COG3162 Predicted membrane protein - Prom 74488 - 74547 4.2 - Term 74553 - 74597 4.1 63 50 Tu 1 . - CDS 74636 - 76594 2276 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - Prom 76820 - 76879 7.0 64 51 Op 1 . + CDS 76986 - 78422 1578 ## COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit 65 51 Op 2 . + CDS 78467 - 79033 355 ## G2583_4896 NrfB, formate-dependent nitrite reductase 66 51 Op 3 8/0.050 + CDS 79030 - 79701 437 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 67 51 Op 4 5/0.200 + CDS 79698 - 80654 1237 ## COG3301 Formate-dependent nitrite reductase, membrane component + Term 80655 - 80691 -0.9 68 52 Op 1 7/0.050 + CDS 80788 - 82392 1184 ## COG1138 Cytochrome c biogenesis factor 69 52 Op 2 9/0.050 + CDS 82385 - 82768 369 ## COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes 70 52 Op 3 4/0.500 + CDS 82765 - 83361 642 ## COG4235 Cytochrome c biogenesis factor + Prom 83396 - 83455 7.2 71 53 Tu 1 . + CDS 83703 - 85016 1632 ## COG1301 Na+/H+-dicarboxylate symporters - Term 85012 - 85047 3.3 72 54 Tu 1 4/0.500 - CDS 85094 - 85783 566 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 85807 - 85866 5.1 - Term 85831 - 85862 4.1 73 55 Op 1 5/0.200 - CDS 85877 - 87556 1863 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 74 55 Op 2 3/0.700 - CDS 87605 - 88024 324 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 88086 - 88145 4.2 - Term 88178 - 88215 6.2 75 56 Op 1 2/0.800 - CDS 88222 - 89688 1632 ## COG1538 Outer membrane protein 76 56 Op 2 6/0.050 - CDS 89685 - 91736 1497 ## COG1289 Predicted membrane protein 77 56 Op 3 . - CDS 91736 - 92767 982 ## COG1566 Multidrug resistance efflux pump 78 56 Op 4 . - CDS 92786 - 93061 185 ## EcHS_A4328 hypothetical protein - Prom 93184 - 93243 13.3 - Term 93220 - 93261 10.3 79 57 Tu 1 . - CDS 93270 - 95255 2308 ## COG2015 Alkyl sulfatase and related hydrolases - Prom 95458 - 95517 5.9 80 58 Op 1 2/0.800 - CDS 95528 - 96457 512 ## COG1940 Transcriptional regulator/sugar kinase 81 58 Op 2 2/0.800 - CDS 96441 - 97136 725 ## COG0036 Pentose-5-phosphate-3-epimerase 82 58 Op 3 21/0.000 - CDS 97147 - 98127 1001 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 83 58 Op 4 16/0.000 - CDS 98106 - 99638 175 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 - Prom 99659 - 99718 2.0 84 58 Op 5 . - CDS 99765 - 100700 905 ## COG1879 ABC-type sugar transport system, periplasmic component 85 58 Op 6 . - CDS 100759 - 101649 527 ## COG1737 Transcriptional regulators - Prom 101729 - 101788 6.6 + Prom 101714 - 101773 8.4 86 59 Op 1 . + CDS 102008 - 102457 301 ## COG0698 Ribose 5-phosphate isomerase RpiB 87 59 Op 2 . + CDS 102526 - 102855 193 ## B21_03923 hypothetical protein Predicted protein(s) >gi|299857049|gb|ADWS01000015.1| GENE 1 473 - 916 360 147 aa, chain - ## HITS:1 COG:ECs4930 KEGG:ns NR:ns ## COG: ECs4930 COG0454 # Protein_GI_number: 15834184 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 296 97.0 9e-81 MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVRSFLPEAPLWVAVNERD QPVGFMLLSGQHMDALFIDPDVCGCGVGRMLVEHALSMAPELTTNVNEQNEQAVGFYKKV GFKVTGRSEVDDLGKPYPLLNLAYVGE >gi|299857049|gb|ADWS01000015.1| GENE 2 1073 - 2002 908 309 aa, chain + ## HITS:1 COG:ECs4931 KEGG:ns NR:ns ## COG: ECs4931 COG1897 # Protein_GI_number: 15834185 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 625 99.0 1e-179 MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLMPKKIETENQFLRLLSN SPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQEQNFDGLIVTGAPLGLVEFNDVAY WPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTRTDKLSGVYEHHILHPHALLT RGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGDAYLFASKDKRIAFVTGHPEYDA QTLAQEYFRDVEAGLGPEVPYNYFPHNDPQNTPRASWRSHGNLLFTNWLNYYVYQITPYD LRHMNPTLD >gi|299857049|gb|ADWS01000015.1| GENE 3 2271 - 3872 1580 533 aa, chain + ## HITS:1 COG:aceB KEGG:ns NR:ns ## COG: aceB COG2225 # Protein_GI_number: 16131840 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Escherichia coli K12 # 1 533 1 533 533 1102 99.0 0 MTEQATTTDELAFIRPYGEQEKQILTAEAVEFLTELVTHFTPQRNKLLAARIQQQQDIDN GTLPDFISETASIRDTDWKIRGIPADLQDRRVEITGPVERKMVINALNANVKVFMADFED SLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNPAVLICRVRGLHLPEKHVTWR GEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPR GTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQA VTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEERNNQVLNKVKADKALEANNG HDGTWIAHPGLADTAMAVFNDILGSRKNQLEVMREQDAPITADQLLAPCDGERTEEGMRA NIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLSNGKPVTKALFR QMLGEEMKVIASELGEERFSQGRFDDAARLMEQITTSDELIDFLTLPGYRLLA >gi|299857049|gb|ADWS01000015.1| GENE 4 3902 - 5206 1555 434 aa, chain + ## HITS:1 COG:aceA KEGG:ns NR:ns ## COG: aceA COG2224 # Protein_GI_number: 16131841 # Func_class: C Energy production and conversion # Function: Isocitrate lyase # Organism: Escherichia coli K12 # 1 434 1 434 434 866 100.0 0 MKTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECTLAQLGAAKMWRLLHGE SKKGYINSLGALTGGQALQQAKAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAV VERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEAGFGGVLNAFELMKAMIEAGA AAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLAADVTGVPTLLVARTDADAADL ITSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRGLAYAPYADLVWCETSTPDLELARR FAQAIHAKYPGKLLAYNCSPSFNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMWF NMFDLANAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSHQQEVGTGYFDKVTTIIQGGTS SVTALTGSTEESQF >gi|299857049|gb|ADWS01000015.1| GENE 5 5487 - 7223 1281 578 aa, chain + ## HITS:1 COG:aceK KEGG:ns NR:ns ## COG: aceK COG4579 # Protein_GI_number: 16131842 # Func_class: T Signal transduction mechanisms # Function: Isocitrate dehydrogenase kinase/phosphatase # Organism: Escherichia coli K12 # 1 578 1 578 578 1189 99.0 0 MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKNRIHLYDHHVGL VVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESFFNSVYCRLFDHRSLTPER LFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDLPLRLRWQNKSRDIHYIIRHL TETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSGTLPFLLPIHQTDDGELFIDTCL TTTAEASIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYRE YLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLV KEHDRVGRMADTQEFENFVLEKRHISPALMELLLQEAAEKITDLGEQIVIRHLYIERRMV PLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC YMTEVNFRDIPPPRYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLF RADYWRALQNRIREGHVEDVYAYRRRQRFSVRYGEMLF >gi|299857049|gb|ADWS01000015.1| GENE 6 7192 - 7725 213 177 aa, chain - ## HITS:1 COG:arp KEGG:ns NR:ns ## COG: arp COG0666 # Protein_GI_number: 16131843 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli K12 # 25 177 576 728 728 290 95.0 6e-79 MAIGQNHQLTQLMIQLQKMPELHRTEMLTAYNSGHMNVINTIFNALPTLFNTFKFDKKNM KPLLLANNSNEYPGLFSAIQHKQQNVVETVYLALSDHARLFGFTAEDIMDFWQHKAPQKY SAFELAFEFGHRVIAELILNTLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR >gi|299857049|gb|ADWS01000015.1| GENE 7 9084 - 9908 736 274 aa, chain - ## HITS:1 COG:ECs4936 KEGG:ns NR:ns ## COG: ECs4936 COG1414 # Protein_GI_number: 15834190 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 274 14 287 287 526 100.0 1e-149 MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSVALTELAQQAGLPNSTT HRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHPILRNLMEESGETV NMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVTKLLHR KGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISI SGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR >gi|299857049|gb|ADWS01000015.1| GENE 8 10093 - 13791 4384 1232 aa, chain + ## HITS:1 COG:metH_2 KEGG:ns NR:ns ## COG: metH_2 COG1410 # Protein_GI_number: 16131845 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I, cobalamin-binding domain # Organism: Escherichia coli K12 # 332 1232 1 901 901 1835 100.0 0 MSGASVSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDL LVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACA DEWTARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGA DLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSL RHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAKQI REWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLPEIPVACRLSGLEPLNIGEDSL FVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVENGAQIIDINMDEGMLDAEAAMVR FLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRR YGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEH NNYAQDFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMG IVNAGQLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYRGSKTDDTANAQQAEWR SWEVNKRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFL PQVVKSARVMKQAVAYLEPFIEASKEQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNY EIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGA TTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHG RKKPRTPPVTLEAARDNDFAFDWQAYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWS LAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYR DETRTHVINVSHHLRQQTEKTGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADA FEAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRP APGYPACPEHTEKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQI QRDQVEDYARRKGMSVTEVERWLAPNLGYDAD >gi|299857049|gb|ADWS01000015.1| GENE 9 14011 - 15642 1687 543 aa, chain + ## HITS:1 COG:yjbB KEGG:ns NR:ns ## COG: yjbB COG1283 # Protein_GI_number: 16131846 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Escherichia coli K12 # 1 543 1 543 543 945 100.0 0 MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKKPLAFCAGIGVTALVQS SNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTFDLSWLSPLLIFIGVIFFL GRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGVQVIFASLTGDILLDALIGAM FAIISYSSLAAVLLTATLTAAGIISFPVALCLVIGANLGSGLLAMLNNSAANAAARRVAL GSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVIYFHVFYNLVRCLVMLPFVDPMARF CKTIIRDEPELDTQLRPKHLDVSALDTPTLALANAARETLRIGDAMEQMMEGLNKVMHGE PRQEKELRKLADDINVLYTAIKLYLARMPKEELAEEESRRWAEIIEMSLNLEQASDIVER MGSEIADKSLAARRAFSLDGLKELDALYEQLLSNLKLAMSVFFSGDVTSARRLRRSKHRF RILNRRYSHAHVDRLHQQNVQSIETSSLHLGLLGDMQRLNSLFCSVAYSVLEQPDEDEGR DEY >gi|299857049|gb|ADWS01000015.1| GENE 10 15733 - 16422 776 229 aa, chain - ## HITS:1 COG:ECs4939 KEGG:ns NR:ns ## COG: ECs4939 COG3340 # Protein_GI_number: 15834193 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 452 100.0 1e-127 MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQTWDDYTAKTAAVLAPL GVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGLLAPITDVVKRGALYIGWS AGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTNALPEGHKGETREQRIRELLV VAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGEEAVPLEAGHRF >gi|299857049|gb|ADWS01000015.1| GENE 11 16634 - 17506 888 290 aa, chain + ## HITS:1 COG:ECs5005 KEGG:ns NR:ns ## COG: ECs5005 COG1187 # Protein_GI_number: 15834259 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 517 99.0 1e-146 MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS SEAKPKVKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR >gi|299857049|gb|ADWS01000015.1| GENE 12 17507 - 17779 362 90 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_5501 NR:ns ## KEGG: ECH74115_5501 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 90 1 90 90 116 100.0 2e-25 MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKKEYIDKLMVEREAEAKK ARQLKKKQAYKPDPEASFSWSANTSTRGRR >gi|299857049|gb|ADWS01000015.1| GENE 13 18309 - 19436 1104 375 aa, chain + ## HITS:1 COG:PA4582 KEGG:ns NR:ns ## COG: PA4582 COG0330 # Protein_GI_number: 15599778 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Pseudomonas aeruginosa # 1 374 3 379 381 384 56.0 1e-106 MIKKISVRKDQLALLSRNGDYYKVLHAGEHLLPWLNTPEVLLITLDGSEVPDVLADYLRR FQPDWVEKYCLVADLSEIEAGALYMDGILQEILPPSTRRLYWRVEDDLTLVRMNTQQVQV QTEVMNAVLQPRRKGAVKGRDAILTVQVPAWHVGVLKIDGETQALLPPGLTAYWKINHLV DAEVVDTRLQVLEVSGQEILTKDKVNLRINLAANWRYSDVLLAFSQLTKPIDHLYRELQF ALREAVGTRTLDELLEDKQVIDDVVSEQVKSRMLPFGMEIASLGVKDIVLPGDMKNILAQ LVEAEKSAQANVIRRREETAATRSLLNTAKVMENNPVALRLKELETLERVAERIDNISVF GGLDQVLHGLVNIKG >gi|299857049|gb|ADWS01000015.1| GENE 14 19442 - 20233 600 263 aa, chain + ## HITS:1 COG:RSc0225 KEGG:ns NR:ns ## COG: RSc0225 COG3541 # Protein_GI_number: 17544944 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Ralstonia solanacearum # 6 260 21 274 281 289 59.0 3e-78 MPLNGVSAAMRERVSQQLREIERRYDVKVLYACESGSRGWGFASPDSDYDVRFLYVHPLE WYLRVEAPRDVIELPIDDELDVSGWEWRKALGLLKGANPTLIEWLDSPVVYQQDEETITA LKAMVPKWFSPLRARWHYYSMARKNFRGYLQGDEVRLKKYFYVLRPLLAVRWVEAGKGVP PMRFAELLAGSELDAPLRAEIDELLERKQRAGEAEYGPRRPLLHAFIRAELARGEIPPLL PDSREGDVKELDSLMYQTVMRRA >gi|299857049|gb|ADWS01000015.1| GENE 15 20269 - 21195 287 308 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4511 NR:ns ## KEGG: EC55989_4511 # Name: not_defined # Def: putative zeta toxin; poison-antidote element # Organism: E.coli_55989 # Pathway: not_defined # 1 308 3 310 310 593 100.0 1e-168 MATLMEKDALLNGASQCIAFLSNIIDNCSVSSHQDSGDALKRLVSYRDYLYSTPAELVDF TQGKILLQQVRTQYQHEFNNTTHSENKASFDSIWQRLTNHEVTPQQHPIGFVLGGQPGAG KSSLIELAKRETKDNIMIINGDDFRFLHPDFNYIYQNYGDDFVTHTAKFSGETVERAIER AIVSKLNIVVEGTFRNAATPLQTLKKLKDAGYQTEVMIKTTSAALSWESTNERYSKDKEA GNIARKVDKNHHDIVTGLLAENARKVFASNLSDKFAVYSREKMIFSSQAATNDDIATLIQ NEISGNTQ >gi|299857049|gb|ADWS01000015.1| GENE 16 21340 - 22689 1390 449 aa, chain - ## HITS:1 COG:ECs5007 KEGG:ns NR:ns ## COG: ECs5007 COG0527 # Protein_GI_number: 15834261 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli O157:H7 # 1 449 1 449 449 783 99.0 0 MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGITNLLVALAEGLEPGER FEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAAALATSPALTDELVSHGEL MSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDVAALAELAALQLLPRLNDGLVI TQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRI DEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPRAGGTLVCNKTENPPLFR ALALRRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTSEVSVALTLDTTGSTS TGDTLLTQSLLMELSALCRVEVEEGLALVALIGNDLSKACGVGKEVFGVLEPFNIRMICY GASSHNLCFLVPGEDAEQVVQKLHFNLFE >gi|299857049|gb|ADWS01000015.1| GENE 17 23214 - 24863 1981 549 aa, chain + ## HITS:1 COG:ECs5008 KEGG:ns NR:ns ## COG: ECs5008 COG0166 # Protein_GI_number: 15834262 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 1128 99.0 0 MKNINPTQTAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSATFGDQMLVDYSKNRITE ETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTPILVDGKDVMPEV NAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDLGPYMVTEALRPYKNHLNMHF VSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTNAHSARDWFLKAAGDEKHVAKHF AALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSAIGLSIVLSIGFDNFVELLSGAHAM DKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEAILPYDQYMHRFAAYFQQGNMESNGKY VDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKMVPCDFIAPAITHNPLSDHHQKL LSNFFAQTEALAFGKSREVVEQEYRDQDKDPATLDYVVPFKVFEGNRPTNSILLREITPF SLGALIALYEHKIFTQGVILNIFTFDQWGVELGKQLANRILPELKDDKEISSHDSSTNGL INRYKAWRG >gi|299857049|gb|ADWS01000015.1| GENE 18 25218 - 25460 176 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAA TGGGDGSNTGTTTTTTTSTQ >gi|299857049|gb|ADWS01000015.1| GENE 19 25574 - 26212 701 212 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4775 NR:ns ## KEGG: ECO103_4775 # Name: yjbF # Def: putative lipoprotein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 212 1 212 212 413 99.0 1e-114 MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGP QLFVVLAFAEDGQQKWVTQDQATLVIQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIVD GATWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETPVRVLDEEVSTDQARWHNRY WIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ >gi|299857049|gb|ADWS01000015.1| GENE 20 26209 - 26946 585 245 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4516 NR:ns ## KEGG: EC55989_4516 # Name: yjbG # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 245 1 245 245 434 100.0 1e-120 MIKQTIVALILSVGASSVFAAGTVKVFSNGSSEAKTLTGAEYLIDLVGQPRLANSWWPGA VISEELATAAALRQQQALLTRLAELAADSSADDAAAINALRQQIQALKVTGRQKINLDPD IVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSGQNLLSGA DRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLT QRIPQ >gi|299857049|gb|ADWS01000015.1| GENE 21 26946 - 29042 2200 698 aa, chain + ## HITS:1 COG:no KEGG:JW3989 NR:ns ## KEGG: JW3989 # Name: yjbH # Def: predicted porin # Organism: E.coli_J # Pathway: not_defined # 1 698 1 698 698 1413 99.0 0 MKKRHLLSLLALGISTACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDN DQYRYYSASVQLFPWLETTLRYTDVRTRQYSNVEAFSGDQTYKDKAFDLKLRLWEESYWL PQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCY RDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQ HSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGI KTIRVTENRLNMPQVTTETDVASLKNHLAGEPLGHETTLAQKRVEPVVPQSTEQGWYIDK SRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEV LYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV GQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGP TRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR >gi|299857049|gb|ADWS01000015.1| GENE 22 29582 - 29992 581 136 aa, chain + ## HITS:1 COG:yjbA KEGG:ns NR:ns ## COG: yjbA COG3223 # Protein_GI_number: 16131856 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 136 1 136 136 199 100.0 2e-51 MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLADVLFAPEQTSKYELVEG LVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILL LVITLWLCNSKRLKRE >gi|299857049|gb|ADWS01000015.1| GENE 23 30036 - 31511 1501 491 aa, chain - ## HITS:1 COG:ECs5014 KEGG:ns NR:ns ## COG: ECs5014 COG0477 # Protein_GI_number: 15834268 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 491 1 491 491 938 99.0 0 MNTQYNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFC VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPI YLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYC VNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAESIL RKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYA PEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLG TAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANY FVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEP ETKKTQQTATL >gi|299857049|gb|ADWS01000015.1| GENE 24 31883 - 32773 1050 296 aa, chain - ## HITS:1 COG:ECs5015 KEGG:ns NR:ns ## COG: ECs5015 COG3833 # Protein_GI_number: 15834269 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 519 100.0 1e-147 MAMVQPKSQKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNFATGSLIPEQISWDHWK LALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKAT LLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGGIALHVWTIKGY FETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV NSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG >gi|299857049|gb|ADWS01000015.1| GENE 25 32788 - 34332 1584 514 aa, chain - ## HITS:1 COG:malF KEGG:ns NR:ns ## COG: malF COG1175 # Protein_GI_number: 16131859 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 1 514 1 514 514 978 100.0 0 MDVIKKKHWWQSDALKWSVLGLLGLLVGYLVVLMYAQGEYLFAITTLILSSAGLYIFANR KAYAWRYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTFERAQEVLLDRSWQAGKTY NFGLYPAGDEWQLALSDGETGKNYLSDAFKFGGEQKLQLKETTAQPEGERANLRVITQNR QALSDITAILPDGNKVMMSSLRQFSGTQPLYTLDGDGTLTNNQSGVKYRPNNQIGFYQSI TADGNWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGM VLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPA WFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLP LLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGG GQDFGLAAAIATLIFLLVGALAIVNLKATRMKFD >gi|299857049|gb|ADWS01000015.1| GENE 26 34486 - 35676 1533 396 aa, chain - ## HITS:1 COG:ECs5017 KEGG:ns NR:ns ## COG: ECs5017 COG2182 # Protein_GI_number: 15834271 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 764 100.0 0 MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIK VTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTW DAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEP YFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAE AAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKE LAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIP QMSAFWYAVRTAVINAASGRQTVDEALKDAQTRITK >gi|299857049|gb|ADWS01000015.1| GENE 27 36041 - 37156 1226 371 aa, chain + ## HITS:1 COG:ECs5018 KEGG:ns NR:ns ## COG: ECs5018 COG3839 # Protein_GI_number: 15834272 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 371 1 371 371 729 100.0 0 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEV LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMN FLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPSDIADVIL EGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGT ACRRLHKEPGV >gi|299857049|gb|ADWS01000015.1| GENE 28 37231 - 38568 1612 445 aa, chain + ## HITS:1 COG:ECs5019 KEGG:ns NR:ns ## COG: ECs5019 COG4580 # Protein_GI_number: 15834273 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli O157:H7 # 1 445 2 446 446 853 99.0 0 MITLRKLPLAVAVAAGVMSAQAMAVDFHGYARSGIGWTGSGGEQQCFQTTGAQSKYRLGN ECETYAELKLGQEVWKEGDKSFYFDTNVAYSVAQQNDWEATDPAFREANVQGKNLIEWLP GSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGLENIDVGFGKLSLAATRSSEAGGSSSFA SNNIYDYTNETANDVFDVRLAQMEINPGGTLELGVDYGRANLRDNYRLVDGASKDGWLFT AEHTQSVLKGFNKFVVQYATDSMTSQGKGLSQGSGVAFDNEKFAYNINNNGHMLRILDHG AISMGDNWDMMYVGMYQDINWDNDNGTKWWTVGIRPMYKWTPIMSTVMEIGYDNVESQRT GDKNNQYKITLAQQWQAGDSIWSRPAIRVFATYAKWDEKWGYDYNGDSKVNPNYGKAVPA DFNGGSFGRGDSDEWTFGAQMEIWW >gi|299857049|gb|ADWS01000015.1| GENE 29 38720 - 39640 823 306 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_4571 NR:ns ## KEGG: ECUMN_4571 # Name: malM # Def: maltose regulon periplasmic protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 306 1 306 306 496 100.0 1e-139 MKMNKSLIALCLSAGLLASAPGISLADVNYVPQNTSDAPAIPSAALQQLTWTPVDQSKTQ TTQLATGGQQLNVPGISGPVAAYSVPANIGELTLTLTSEVNKQTSVFAPNVLILDQNMTP SAFFPSSYFTYQEPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTQLLDPAKA YAKGVGNSIPDIPDPVARHTTDGLLKLKVKTNSSSSVLVGPLFGSSAPAPVTVGNTAAPA VAAPAPAPVKKSEPMLNDTESYFNTAIKNAVAKGDVDKALKLLDEAERLGSTSARSTFIS SVKGKG >gi|299857049|gb|ADWS01000015.1| GENE 30 39615 - 39767 57 50 aa, chain - ## HITS:1 COG:no KEGG:ECBD_3997 NR:ns ## KEGG: ECBD_3997 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 50 1 50 50 94 100.0 8e-19 MDILSEEEVSYYKKSLISQEGSIKKGAPGDAPVVAKSALWGVITPCLLHC >gi|299857049|gb|ADWS01000015.1| GENE 31 39869 - 40063 57 64 aa, chain + ## HITS:1 COG:ECs5021_1 KEGG:ns NR:ns ## COG: ECs5021_1 COG1357 # Protein_GI_number: 15834275 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Escherichia coli O157:H7 # 1 61 1 61 277 90 80.0 6e-19 MISHILNSGGNNSLMKHDVVQGNNIVDLDLLRNFNGVPGLNRDNFIYISNIFSNIKQRNE KIMQ >gi|299857049|gb|ADWS01000015.1| GENE 32 40121 - 41449 294 442 aa, chain + ## HITS:1 COG:yjbI_1 KEGG:ns NR:ns ## COG: yjbI_1 COG1357 # Protein_GI_number: 16131864 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Escherichia coli K12 # 1 248 1 248 248 454 96.0 1e-127 MKKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDY NFTTAIVDNVIFRCRRLHNVIFIKASGECVDFSKNILDTVDFSQSQLTQSNFREYQIRNS NFDNCYLYASHFTRAEFLSAKEISFIKSNMTAVMFDHVRISTGNFKDCITEQLELTIDYS DIFGNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKTFS HCPYIKDPIIRSYIHSGEDNKFDDFMRQHRFSKVDFDTQQMIHFINRFNMNKGLIDKNNN FFIQLIDQALRSTDDMIKANAWYLYKEWIRSDDVSPIFIETEEKLRTFNTNKLTRNDNIF ILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSRHEMLPVNLTQETLFSSKSHG KYALFPIFTASWRAHRIMNKGV >gi|299857049|gb|ADWS01000015.1| GENE 33 41672 - 42169 570 165 aa, chain + ## HITS:1 COG:ubiC KEGG:ns NR:ns ## COG: ubiC COG3161 # Protein_GI_number: 16131865 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate synthetase (chorismate lyase) # Organism: Escherichia coli K12 # 1 165 38 202 202 307 98.0 4e-84 MSHPALTQLRALRYFKEIPALEPQLLDWLLLEDSMTKRFEQQGKTVSVTMIREGFVEQNE IPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSGPELALQKLGKTPLGRYLF TSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLPASPLY >gi|299857049|gb|ADWS01000015.1| GENE 34 42182 - 43054 984 290 aa, chain + ## HITS:1 COG:ECs5023 KEGG:ns NR:ns ## COG: ECs5023 COG0382 # Protein_GI_number: 15834277 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 512 99.0 1e-145 MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVPQLWILAVFVAGVWLMR AAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTIL LSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWLMFLANILWA VAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYY WSIVVAGALFVYQQKLIANREREACFKAFMNNNYVGLVLFLGLAMSYWHF >gi|299857049|gb|ADWS01000015.1| GENE 35 43209 - 45692 2619 827 aa, chain - ## HITS:1 COG:plsB KEGG:ns NR:ns ## COG: plsB COG2937 # Protein_GI_number: 16131867 # Func_class: I Lipid transport and metabolism # Function: Glycerol-3-phosphate O-acyltransferase # Organism: Escherichia coli K12 # 1 827 1 827 827 1658 99.0 0 MTFCYPCRAFALLTRGFTSFMSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRP IMYVLPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEE SIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKL LASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQ GINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPA GPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTG TLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLR NLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAG AANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHAL QMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLME HVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINSAHSRTLQLLA AGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLV LTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLTIESATQGEG >gi|299857049|gb|ADWS01000015.1| GENE 36 45803 - 46171 431 122 aa, chain + ## HITS:1 COG:ECs5025 KEGG:ns NR:ns ## COG: ECs5025 COG0818 # Protein_GI_number: 15834279 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Escherichia coli O157:H7 # 1 122 1 122 122 195 100.0 2e-50 MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVVIACWLDVDAITRVLLI SSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAVLIAIIVAVITWCILLWSH FG >gi|299857049|gb|ADWS01000015.1| GENE 37 46281 - 46889 576 202 aa, chain + ## HITS:1 COG:ECs5026 KEGG:ns NR:ns ## COG: ECs5026 COG1974 # Protein_GI_number: 15834280 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 1 202 1 202 202 380 100.0 1e-106 MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS GASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSM KDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVD LRQQSFTIEGLAVGVIRNGDWL >gi|299857049|gb|ADWS01000015.1| GENE 38 46962 - 48287 1309 441 aa, chain + ## HITS:1 COG:dinF KEGG:ns NR:ns ## COG: dinF COG0534 # Protein_GI_number: 16131870 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 1 441 19 459 459 675 98.0 0 MAFLTSSDKALWHLALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFM LLLFLRMSTTGLTAQAYGAKNPQALARALVQPLLLALGAGALIALLRTPIIDLALHIVGG SEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLV MGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGISGEMLKTAWRGNFRRLLALNRD IMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTLLTFTAYALDGFAYAVEAHSGQAYG ARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGEHIIALLTSLTQIQELADRYLIWQVIL PLVGVWCYLLDGMFIGATRAAEMRNSMAVAAAGFALTLLTLPWLGNHGLWLALTVFLALR GLSLAAIWRRHWRNGTWFAAT >gi|299857049|gb|ADWS01000015.1| GENE 39 48403 - 48612 373 69 aa, chain + ## HITS:1 COG:ECs5028 KEGG:ns NR:ns ## COG: ECs5028 COG3237 # Protein_GI_number: 15834282 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 95 100.0 2e-20 MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQERYGYQKDQAEKEVVD WETRNEYRW >gi|299857049|gb|ADWS01000015.1| GENE 40 48654 - 49169 487 171 aa, chain - ## HITS:1 COG:zur KEGG:ns NR:ns ## COG: zur COG0735 # Protein_GI_number: 16131872 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Escherichia coli K12 # 1 171 21 191 191 325 100.0 3e-89 MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLREAEPQAKP PTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFICDRCGAVKEECAEGVEDI MHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQHDHSVQVKKKPR >gi|299857049|gb|ADWS01000015.1| GENE 41 49487 - 50509 549 340 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_4600 NR:ns ## KEGG: EcE24377A_4600 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 340 1 340 340 596 95.0 1e-169 MLKIIPGATGYFNKTLNSNQFENKDATKDKLDDVDATEDKLDKRGSIKGKLNNIYGKSID YAALRHRDIIIAKIDLFIQRITHNLWHARKKNVFLIEQINDLKMWVNKYIDDCTDEDLND RDFIASVVDRAIFHFAINSICNPGANKDATPIERCTFDVETKNDLPSTVQLFYEESKDNE PLANIHFQVIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYTDLAGAEKVNINEYN ENYLTAQFEELSQRDMKKYLGEMKHLADRGGMKFDDYLDKMSLLVNEGKLEPDILSKMRD AAPKLIDFAKSFDPNSKEKIKILTDTSNLIYDLFGVKSAK >gi|299857049|gb|ADWS01000015.1| GENE 42 50873 - 51910 1143 345 aa, chain + ## HITS:1 COG:ECs5031 KEGG:ns NR:ns ## COG: ECs5031 COG0042 # Protein_GI_number: 15834285 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Escherichia coli O157:H7 # 1 345 1 345 345 732 100.0 0 MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVT TGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ NGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGEC EMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQ HMDGVMVGREAYQNPGILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHIT RHMLGLFQGIPGARQWRRYLSENAHKAGADINVLEHALKLVADKR >gi|299857049|gb|ADWS01000015.1| GENE 43 52044 - 52286 400 80 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4543 NR:ns ## KEGG: EC55989_4543 # Name: pspG # Def: phage shock protein G # Organism: E.coli_55989 # Pathway: not_defined # 1 80 71 150 150 127 100.0 9e-29 MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWV IKAIKAPKMPKYQRYDRWRY >gi|299857049|gb|ADWS01000015.1| GENE 44 52452 - 53435 840 327 aa, chain - ## HITS:1 COG:ECs5033 KEGG:ns NR:ns ## COG: ECs5033 COG0604 # Protein_GI_number: 15834287 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 628 99.0 1e-180 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSG LGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNINADKAAILPAAISFEQAAA SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS ALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGN SSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQ KYPLKDAQRAHEILESRATQGSSLLIP >gi|299857049|gb|ADWS01000015.1| GENE 45 53518 - 54933 1517 471 aa, chain + ## HITS:1 COG:dnaB KEGG:ns NR:ns ## COG: dnaB COG0305 # Protein_GI_number: 16131878 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Escherichia coli K12 # 1 471 1 471 471 892 100.0 0 MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVADDF YTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANIS AYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDLAESRVFKIAESRANKDEGPK NIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTF AMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISGT MGILLEKRNIYIDDSSGLTPTEVRSRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLE IAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYR DEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE >gi|299857049|gb|ADWS01000015.1| GENE 46 54986 - 56065 1005 359 aa, chain + ## HITS:1 COG:alr KEGG:ns NR:ns ## COG: alr COG0787 # Protein_GI_number: 16131879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli K12 # 1 359 1 359 359 726 100.0 0 MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARL EEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVW MKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNT FCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGR VAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD >gi|299857049|gb|ADWS01000015.1| GENE 47 56318 - 57511 1250 397 aa, chain + ## HITS:1 COG:tyrB KEGG:ns NR:ns ## COG: tyrB COG1448 # Protein_GI_number: 16131880 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 397 1 397 397 798 98.0 0 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLKAVAEAEARLNAQP HGASLYLPMEGLNSYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFP ESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHP CCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPAL VSNSFSKIFSLYGERVGGLSVLCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN DEALKASWLAEVEEMRTRILATRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSTAQVD RLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM >gi|299857049|gb|ADWS01000015.1| GENE 48 57732 - 58274 297 180 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_4286 NR:ns ## KEGG: ECIAI1_4286 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 180 1 180 180 332 99.0 3e-90 MVTNFITPDGDDDMNISYVNSSKTTSLPVELDALNNKDISYAKDFSYAKDFFLYIETQLK IAKDFCRPGEEVSSSIASKVFHAFIDLVNKIRSKKDFMYICTLCCFAEEVKGDYSHYRTF LFDIGNQYKVKLTQSGKKELSLTLEFNDTIIESQKVTGNKAKHILEDIEKFYRNKPDTYY >gi|299857049|gb|ADWS01000015.1| GENE 49 58637 - 59350 546 237 aa, chain + ## HITS:1 COG:aphA KEGG:ns NR:ns ## COG: aphA COG3700 # Protein_GI_number: 16131881 # Func_class: R General function prediction only # Function: Acid phosphatase (class B) # Organism: Escherichia coli K12 # 1 237 1 237 237 471 99.0 1e-133 MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQAPIHWVSVAQIENSLAG RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVAR QLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPVTNMNPVIFAGDKPGQNTKSQW LQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTYKPLPQAGAFGEEVIVNSEY >gi|299857049|gb|ADWS01000015.1| GENE 50 59461 - 59877 380 138 aa, chain + ## HITS:1 COG:ECs5038 KEGG:ns NR:ns ## COG: ECs5038 COG0432 # Protein_GI_number: 15834292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 275 99.0 1e-74 MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVR HDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPLHKGRIQTGTWQGIWLG EHRIHGGSRRIIATLQGE >gi|299857049|gb|ADWS01000015.1| GENE 51 59881 - 60237 465 118 aa, chain + ## HITS:1 COG:ECs5039 KEGG:ns NR:ns ## COG: ECs5039 COG2315 # Protein_GI_number: 15834293 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 118 1 118 118 216 100.0 5e-57 MTISELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVENRPAVSLKTSPELAELL RQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL >gi|299857049|gb|ADWS01000015.1| GENE 52 60272 - 63094 2947 940 aa, chain - ## HITS:1 COG:uvrA KEGG:ns NR:ns ## COG: uvrA COG0178 # Protein_GI_number: 16131884 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Escherichia coli K12 # 1 940 1 940 940 1900 100.0 0 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML >gi|299857049|gb|ADWS01000015.1| GENE 53 63348 - 63884 753 178 aa, chain + ## HITS:1 COG:ECs5041 KEGG:ns NR:ns ## COG: ECs5041 COG0629 # Protein_GI_number: 15834295 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Escherichia coli O157:H7 # 1 178 1 178 178 270 100.0 1e-72 MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVL FGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQGGG APAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAPSNEPPMDFDDDIPF >gi|299857049|gb|ADWS01000015.1| GENE 54 63983 - 64264 258 93 aa, chain - ## HITS:1 COG:no KEGG:ECSE_4354 NR:ns ## KEGG: ECSE_4354 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 93 34 126 126 166 100.0 3e-40 MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLG ITMADITAIWHNIESVMIEEMNQTPPQWPMILT >gi|299857049|gb|ADWS01000015.1| GENE 55 64694 - 66280 1102 528 aa, chain + ## HITS:1 COG:yjcC KEGG:ns NR:ns ## COG: yjcC COG4943 # Protein_GI_number: 16131887 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Escherichia coli K12 # 1 528 1 528 528 1052 99.0 0 MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRTFAQLALDKSELVIRQA DLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDNHFLCSSLIAPVNGYTIAP ADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPLFWSEVMSDDPTLQWGVYDTV TKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVYSTKRPIAAIVATSYQRLITHFY NHLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCI GAEALLRWLGEQGQIMNPAEFIPLAEKEGMIEQVTDYVIDNVFRDLGDYLATHADRYVSI NLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVDKMTPIILAFRQAGYEVA IDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEG VETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPARELTRGQ >gi|299857049|gb|ADWS01000015.1| GENE 56 66283 - 66606 296 107 aa, chain - ## HITS:1 COG:ECs5044 KEGG:ns NR:ns ## COG: ECs5044 COG2207 # Protein_GI_number: 15834298 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 194 100.0 3e-50 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL >gi|299857049|gb|ADWS01000015.1| GENE 57 66692 - 67156 428 154 aa, chain + ## HITS:1 COG:ECs5045 KEGG:ns NR:ns ## COG: ECs5045 COG0789 # Protein_GI_number: 15834299 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 301 100.0 2e-82 MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAII KIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCI GCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN >gi|299857049|gb|ADWS01000015.1| GENE 58 67702 - 69051 1502 449 aa, chain + ## HITS:1 COG:ECs5046 KEGG:ns NR:ns ## COG: ECs5046 COG2252 # Protein_GI_number: 15834300 # Func_class: R General function prediction only # Function: Permeases # Organism: Escherichia coli O157:H7 # 1 449 1 449 449 689 100.0 0 MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAV FVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLGQHISVPVALGAVFLMGVL FTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANGVGLVIKNPLDGLPVALGDFA TFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGLIFDPNVHFSGVFAMPSLSDENG NSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIIDGGKALT TDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTGLTAITVGVLFLLILFLSPLSYLVPGY ATAPALMYVGLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIGFATLVIGRL VSGEWRKLNIGTVVIAVALVTFYAGGWAI >gi|299857049|gb|ADWS01000015.1| GENE 59 69203 - 70852 1638 549 aa, chain + ## HITS:1 COG:ECs5047 KEGG:ns NR:ns ## COG: ECs5047 COG0025 # Protein_GI_number: 15834301 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 979 100.0 0 MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWPTFGLHVEFDPELFLVL FIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWVVPGIPLIPAFALA AVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMIFTVGG ATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIG VSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILET SLMAAEIDPNVEIWMLFTDIILIYAALMLVRFGWLWTMKKFSNRFLKKKPMEFGSWTTRE ILIASFAGVRGAITLAGVLSIPLLLPDGNVFPARYELVFLAAGVILFSLFVGVVMLPILL QHIEVADHSQQLKEERIARAATAEVAIVAIQKMEERLAADTEENIDNQLLTEVSSRVIGN LRRRADGRNDVESSVQEENLERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLL EALLIEENQ >gi|299857049|gb|ADWS01000015.1| GENE 60 71006 - 71749 379 247 aa, chain - ## HITS:1 COG:yjcF KEGG:ns NR:ns ## COG: yjcF COG1357 # Protein_GI_number: 16131892 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Escherichia coli K12 # 1 247 184 430 430 405 90.0 1e-113 MYKTNFYYAIMEKILFDNCILDDSNFAQIKMADGTLNACSAMHVQFYNAAMNRANIKNTF LDYSNFYMAYMAEVNLYKVIAPYVNLFKADLSFSKLDLINFEHADLSRVNLNKAILQSIN LIDSKLFCTWLTNTFLEMVICTGSNMANVNFNNANLSNCHFNCSILTKACMFNTRLYRVN FDEASVQGMGISILRGEENIPIDSDTLVTLQKFFEEDCTSHTGMSQTEDNINAVAMKITA DIMQHAD >gi|299857049|gb|ADWS01000015.1| GENE 61 72476 - 74125 2113 549 aa, chain - ## HITS:1 COG:yjcG KEGG:ns NR:ns ## COG: yjcG COG4147 # Protein_GI_number: 16131893 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Escherichia coli K12 # 1 549 1 549 549 961 100.0 0 MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVVFTLGITYWASKRVRSR SDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFL IAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVALYLIAQMVGAGKLIELLFGLN YHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSE AMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFY ATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAGHLIGGNNMAAVHLANAVGGNLFLGFI SAVAFATILAVVAGLTLAGASAVSHDLYANVFKKGATEREELRVSKITVLILGVIAIILG VLFENQNIAFMVGLAFAIAASCNFPIILLSMYWSKLTTRGAMMGGWLGLITAVVLMILGP TIWVQILGHEKAIFPYEYPALFSITVAFLGIWFFSATDNSAEGARERELFRAQFIRSQTG FGVEQGRAH >gi|299857049|gb|ADWS01000015.1| GENE 62 74122 - 74436 351 104 aa, chain - ## HITS:1 COG:yjcH KEGG:ns NR:ns ## COG: yjcH COG3162 # Protein_GI_number: 16131894 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 104 1 104 104 199 100.0 1e-51 MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTS VTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS >gi|299857049|gb|ADWS01000015.1| GENE 63 74636 - 76594 2276 652 aa, chain - ## HITS:1 COG:acs KEGG:ns NR:ns ## COG: acs COG0365 # Protein_GI_number: 16131895 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Escherichia coli K12 # 1 652 1 652 652 1354 100.0 0 MSQIHKHTIPANIADRCLINPQQYEAMYQQSINVPDTFWGEQGKILDWIKPYQKVKNTSF APGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDASQSKHISYKELHRDVCRF ANTLLELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSNS RLVITSDEGVRAGRSIPLKKNVDDALKNPNVTSVEHVVVLKRTGGKIDWQEGRDLWWHDL VEQASDQHQAEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAALTFKYVFDYHPGDI YWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTA IRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGG FMITPLPGATELKAGSATRPFFGVQPALVDNEGNPLEGATEGSLVITDSWPGQARTLFGD HERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHP KIAEAAVVGIPHNIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTD SLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQAIAMPS >gi|299857049|gb|ADWS01000015.1| GENE 64 76986 - 78422 1578 478 aa, chain + ## HITS:1 COG:ECs5052 KEGG:ns NR:ns ## COG: ECs5052 COG3303 # Protein_GI_number: 15834306 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit # Organism: Escherichia coli O157:H7 # 1 478 1 478 478 971 99.0 0 MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNETFAPQHPDQYLSWKATS EQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVRETLRTGAPKNAEDGPLPM ACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGCADCHNTASPEFAKGKPELTL SRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYFDGKNKAVKFPWDDGMKVENMEQ YYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHGKNNVTCIDCHMPKVQNAEGKLYTD HKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQSINDLKIKVEDQLVHAHFEAKAALDA GATEAEMKPIQDDIRHAQWRWDLAIASHGIHMHAPEEGLRMLGTAMDKAADARTKLARLL ATKGITHEIQIPDISTKEKAQQAIGLNMEQINAEKQDFIKTVIPQWEEQARKNGLLSQ >gi|299857049|gb|ADWS01000015.1| GENE 65 78467 - 79033 355 188 aa, chain + ## HITS:1 COG:no KEGG:G2583_4896 NR:ns ## KEGG: G2583_4896 # Name: nrfB # Def: NrfB, formate-dependent nitrite reductase # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 188 3 190 190 362 100.0 5e-99 MSVLRSLLTAGVLASGLLWSLNGITATPAAQASDDRYEVTQQRNPDAACLDCHKPDTEGM HGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPE QLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPAS VPLLKEQP >gi|299857049|gb|ADWS01000015.1| GENE 66 79030 - 79701 437 223 aa, chain + ## HITS:1 COG:ECs5054 KEGG:ns NR:ns ## COG: ECs5054 COG0437 # Protein_GI_number: 15834308 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 223 1 223 223 446 100.0 1e-125 MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVN KVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDV NPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNLQAGKLPACVEACPTKALTFG NLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ >gi|299857049|gb|ADWS01000015.1| GENE 67 79698 - 80654 1237 318 aa, chain + ## HITS:1 COG:nrfD KEGG:ns NR:ns ## COG: nrfD COG3301 # Protein_GI_number: 16131899 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, membrane component # Organism: Escherichia coli K12 # 1 318 1 318 318 525 100.0 1e-149 MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRFYPQAGGADSTLLRTTLIVG PGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQLYMVVLVLWLAKIFEHDL LALQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLGAYTGFLLSALKSYPFLNNPI LPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAQFVHRMEIPVVWGEIFLLVAFFVGLA LGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPMLLKPWVNRSSGIPAVLAACGASLV GVLMLRFFILYAGQLTVA >gi|299857049|gb|ADWS01000015.1| GENE 68 80788 - 82392 1184 534 aa, chain + ## HITS:1 COG:nrfE KEGG:ns NR:ns ## COG: nrfE COG1138 # Protein_GI_number: 16131900 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli K12 # 1 534 19 552 552 889 98.0 0 MRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGS LLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAI EGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGW SALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQREIFRHWS LLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARD GGPVVRFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATL PFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGIVVSSVSRQEISLNLQPGQQVT LAGYTFRFERLDLQAKGNYTSEKAIVALFDHQQRIGELMPERRFYEARRQQMMEPSIRWN GIHDWYAVMGEKTGADRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGRKRDE >gi|299857049|gb|ADWS01000015.1| GENE 69 82385 - 82768 369 127 aa, chain + ## HITS:1 COG:nrfF KEGG:ns NR:ns ## COG: nrfF COG3088 # Protein_GI_number: 16131901 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in biosynthesis of c-type cytochromes # Organism: Escherichia coli K12 # 1 127 1 127 127 184 99.0 3e-47 MNKGLLTLLLLFTCFARAQVVDTWQFANPQQQQQALNIASQLRCPQCQNQNLLESNAPVA VSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQTLVLWALPVVLLLLMALIL WRVRAKR >gi|299857049|gb|ADWS01000015.1| GENE 70 82765 - 83361 642 198 aa, chain + ## HITS:1 COG:nrfG KEGG:ns NR:ns ## COG: nrfG COG4235 # Protein_GI_number: 16131902 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli K12 # 1 198 1 198 198 325 97.0 3e-89 MKEPKIPVKMLTTLTILMVFLCVGSYLLSPKWQAVHAEYQRQRDPLHQFASQQTPEAQLQ ALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQ ASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINR TQLVESINMAKLLQRRSD >gi|299857049|gb|ADWS01000015.1| GENE 71 83703 - 85016 1632 437 aa, chain + ## HITS:1 COG:ECs5059 KEGG:ns NR:ns ## COG: ECs5059 COG1301 # Protein_GI_number: 15834313 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Escherichia coli O157:H7 # 1 437 1 437 437 751 100.0 0 MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPAGDIFIHLIKMIVVPIV ISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITLANVFQPGAGVDMSQLATV DISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEMLPIIFFSVLFGLGLSSLPAT HREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVTVANFGFSSLWPLAKLVLLVHFA ILFFALVVLGIVARLCGLSVWILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPASI TSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIWQEIILVLTLMVTSKGIAGVPGV SFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHKFDRKKA LAYEREVLGKFDKTADQ >gi|299857049|gb|ADWS01000015.1| GENE 72 85094 - 85783 566 229 aa, chain - ## HITS:1 COG:ECs5060 KEGG:ns NR:ns ## COG: ECs5060 COG0790 # Protein_GI_number: 15834314 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 433 100.0 1e-121 MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQK AADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKP DYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGY SEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG >gi|299857049|gb|ADWS01000015.1| GENE 73 85877 - 87556 1863 559 aa, chain - ## HITS:1 COG:fdhF KEGG:ns NR:ns ## COG: fdhF COG0243 # Protein_GI_number: 16131905 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 559 157 715 715 1172 100.0 0 MSNAINEIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHI ALKNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSAS EIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRGQN NVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVESLPAHTGYRISELPHRAAHGEVR AAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFMTKTASAADVILPSTSWGEHEGVFT AADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGAT YEKMGELGFIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMV LSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKII TRAQVSDRPNKGAIYMTYQWWIGACNELVTENLSPITKTPEYKYCAVRVEPIADQRAAEQ YVIDEYNKLKTRLREAALA >gi|299857049|gb|ADWS01000015.1| GENE 74 87605 - 88024 324 139 aa, chain - ## HITS:1 COG:ECs5061 KEGG:ns NR:ns ## COG: ECs5061 COG0243 # Protein_GI_number: 15834315 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 139 1 139 715 296 100.0 6e-81 MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTP RLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVM QKFARAVIGTNNVDCCARV >gi|299857049|gb|ADWS01000015.1| GENE 75 88222 - 89688 1632 488 aa, chain - ## HITS:1 COG:ECs5062 KEGG:ns NR:ns ## COG: ECs5062 COG1538 # Protein_GI_number: 15834316 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 1 488 1 488 488 895 99.0 0 MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQW WKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVS ANGFLSPYAMDAPALGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETA AVELSLTTGVAQLYYSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARA QILAVDKQIAAVKGQITETRESLRALIGAGASDMPEIKPVALPRVQTGIPATLSYELLAR RPDLQAMRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLK LPLFDGGRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVE ATRFTQRAAEAAYQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ AAPVVEKK >gi|299857049|gb|ADWS01000015.1| GENE 76 89685 - 91736 1497 683 aa, chain - ## HITS:1 COG:yjcQ KEGG:ns NR:ns ## COG: yjcQ COG1289 # Protein_GI_number: 16131907 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 48 683 1 636 636 1221 98.0 0 MSALNSLPLPVVRLLAFFHEELSERRPGRVPQIVQLWVGCLLVILISMTFEIPFVALSLA VLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEPLIRLIIAGPILMGCMFLM RTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCIVVGLYPTLLMTLIGVLWFPS RAITQMHQALNDRLDDAISHLTDSLAPLPETRIEREALALQKLNVFCLADDANWRTQSAW WQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKLASEINKLQHAVAEGQCWQSDWRIT ESEAMAARECNLENICQTLLQLGQMDPNTPPTPAAKPPSMVADAFTNPDYMRYAVKTLLA CLICYTFYSGVDWEGIHTCMLTCVIVANPNVGSSYQKMVLRFGGAFCGAILALLFTLLVM PWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATLENVFGPVYDLVEIR DRAMGIIIGTVVSAVIYTFVWPESEARTLPQKLAGTLGMLSKVMRIPRQQEVTALRTYLQ IRIGLHAAFNACEEMCQRVALERQLDSEERALLIERSQTVIRQGRDILHAWDATWNSAQA LDNALQPDRAAQFADALEKYAAGLATALSRSPQITLEETPASQAILPTLLKQEQHVCQLF ARLPDWTAPALTPATEQAQGATQ >gi|299857049|gb|ADWS01000015.1| GENE 77 91736 - 92767 982 343 aa, chain - ## HITS:1 COG:yjcR KEGG:ns NR:ns ## COG: yjcR COG1566 # Protein_GI_number: 16131908 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 343 1 343 343 583 99.0 1e-166 MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYASADTIDVVPEVSGRIV ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS AVSGVDALVAQRAAVEADIALTKLHLEMATVRAPFDGRVISLKTSVGQFASAMRPIFTLI DTRHWYVIANFRETDLKNIRSGTPATIHLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGL PKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGASAVANLEPQ >gi|299857049|gb|ADWS01000015.1| GENE 78 92786 - 93061 185 91 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A4328 NR:ns ## KEGG: EcHS_A4328 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 91 17 107 107 142 100.0 4e-33 MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRV IQRANINLAFVGIIYTALFALYAMLFWLAFF >gi|299857049|gb|ADWS01000015.1| GENE 79 93270 - 95255 2308 661 aa, chain - ## HITS:1 COG:yjcS KEGG:ns NR:ns ## COG: yjcS COG2015 # Protein_GI_number: 16131909 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alkyl sulfatase and related hydrolases # Organism: Escherichia coli K12 # 1 661 5 665 665 1317 99.0 0 MNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVNQNYAKSLPFSDRQDFD DAQRGFIAPLLDEGILRDANGKVYYRADDYKFDINAAAPETVNPSLWRQSQINGISGLFK VTDKMYQVRGQDISNITFVEGEKGIIVIDPLVTPPAAKAALDLYFQHRPHKPIVAVIYTH SHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGLLLPH NAQGNVGNGLGVTLATGDPSIIAPTKIIVRTGEKMIIDGLEFDFLMTPGSEAPAEMHFYI PALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVW GNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYYGSVS HNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVINLAQEANKQGDYRWSA ELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSHGTTG SPDTIRGMSVEMLFDFMSVRLDSAKAAGKNISLNFNMGNGDNLNLTLNDSVLNYRKTLQP QANASFYISHEDLHAVLTGQAKMADLVKAKKAKIIGNGAKLEEIIACLDNFDLWVNIVTP N >gi|299857049|gb|ADWS01000015.1| GENE 80 95528 - 96457 512 309 aa, chain - ## HITS:1 COG:alsK KEGG:ns NR:ns ## COG: alsK COG1940 # Protein_GI_number: 16131910 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli K12 # 1 309 1 309 309 639 98.0 0 MQKQHNVVAGVDMGATHIRFCLQTAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRF NARCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQL SWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGN PGCLETNCSGMALRRWYEQQPRNYPLSDLFVHAENAPFVQSLLENAARAIATSINLFDPD AVILGGGVMDMPAFPRETLIAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQHF LPQSCAKAP >gi|299857049|gb|ADWS01000015.1| GENE 81 96441 - 97136 725 231 aa, chain - ## HITS:1 COG:alsE KEGG:ns NR:ns ## COG: alsE COG0036 # Protein_GI_number: 16131911 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Escherichia coli K12 # 1 231 1 231 231 468 99.0 1e-132 MKISPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPL DCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRCHDMKVGLILNPETPVE AMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQAT YEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTTQILAAKSEVQPHAKTA >gi|299857049|gb|ADWS01000015.1| GENE 82 97147 - 98127 1001 326 aa, chain - ## HITS:1 COG:alsC KEGG:ns NR:ns ## COG: alsC COG1172 # Protein_GI_number: 16131912 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 326 1 326 326 504 99.0 1e-142 MGFTTRVKSEASEKKPFNFALFWDKYGTFFILAIIVAIFGSLSPEYFLTTNNITQIFVQS SVTVLIGMGEFFAILVAGIDLSVGAILALSGMVTAKLMLAGVDPFLAAMIGGVLVGGALG AINGCLVNWTGLHPFIITLGTNAIFRGITLVISDANSVYGFSFDFVNFFAASVIGIPVPV IFSLIVALILWFLTTRMRLGRNIYALGGNKNSAFYSGIDVKFHILVVFIISGVCAGLAGV VSTARLGAAEPLAGMGFETYAIASAIIGGTSFFGGKGRIFSVVMGGLIIGTINNGLNILQ VQTYYQLVVMGGLIIAAVALDRLISK >gi|299857049|gb|ADWS01000015.1| GENE 83 98106 - 99638 175 510 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 279 494 25 222 309 72 25 1e-11 MATPYISMAGIGKSFGPVHALKSVNLTFYPGEIHALLGENGAGKSTLMKVLSGIHEPTKG TITINNINYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWR EMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKE VDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSNDDIVRL MVGRELQNRFNAMKENVSNLAHETVFEVRNVTSRDRKKVRDISFSVCRGEILGFAGLVGS GRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQ NMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSINQNITELSGGNQQKVLI SKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIA VFCEGRLTQILTNRDDMSEEEIMAWALPQE >gi|299857049|gb|ADWS01000015.1| GENE 84 99765 - 100700 905 311 aa, chain - ## HITS:1 COG:alsB KEGG:ns NR:ns ## COG: alsB COG1879 # Protein_GI_number: 16131914 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 311 1 311 311 558 99.0 1e-159 MNKYLKYFSSTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD NLKKAGGNVEGFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE AFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK TGKILVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPE FKLVDSILVTQ >gi|299857049|gb|ADWS01000015.1| GENE 85 100759 - 101649 527 296 aa, chain - ## HITS:1 COG:rpiR KEGG:ns NR:ns ## COG: rpiR COG1737 # Protein_GI_number: 16131915 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 296 12 307 307 588 100.0 1e-168 MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVS EAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIM EGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMM MSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSP APETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK >gi|299857049|gb|ADWS01000015.1| GENE 86 102008 - 102457 301 149 aa, chain + ## HITS:1 COG:rpiB KEGG:ns NR:ns ## COG: rpiB COG0698 # Protein_GI_number: 16131916 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Escherichia coli K12 # 1 149 1 149 149 287 100.0 4e-78 MKKIAFGCDHVGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAGGEVD GGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQHNDTNVLAFGSRVVGLELAKMI VDAWLGAQYEGGRHQQRVEAITAIEQRRN >gi|299857049|gb|ADWS01000015.1| GENE 87 102526 - 102855 193 109 aa, chain + ## HITS:1 COG:no KEGG:B21_03923 NR:ns ## KEGG: B21_03923 # Name: yjdP # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 109 1 109 109 79 99.0 5e-14 MKRFPLFLLFTLLTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREV SDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERRMEDEYGR Prediction of potential genes in microbial genomes Time: Sun May 15 22:15:58 2011 Seq name: gi|299857048|gb|ADWS01000016.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont15.1, whole genome shotgun sequence Length of sequence - 102117 bp Number of predicted genes - 96, with homology - 96 Number of transcription units - 51, operones - 19 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 1208 702 ## COG0534 Na+-driven multidrug efflux pump + Term 1331 - 1397 30.0 + TRNA 1309 - 1384 87.1 # Asn GTT 0 0 - Term 1788 - 1824 4.2 2 2 Tu 1 . - CDS 1837 - 2553 677 ## COG0217 Uncharacterized conserved protein - Prom 2613 - 2672 10.1 - Term 2796 - 2840 8.9 3 3 Tu 1 . - CDS 2896 - 4350 1051 ## COG0775 Nucleoside phosphorylase - Prom 4381 - 4440 4.3 - Term 4406 - 4449 3.2 4 4 Op 1 21/0.000 - CDS 4452 - 5210 506 ## COG0477 Permeases of the major facilitator superfamily 5 4 Op 2 . - CDS 5296 - 5769 553 ## COG0477 Permeases of the major facilitator superfamily - Prom 5795 - 5854 4.6 6 5 Tu 1 . + CDS 6084 - 7136 237 ## COG0859 ADP-heptose:LPS heptosyltransferase + Term 7358 - 7384 -1.0 - Term 7342 - 7375 5.4 7 6 Op 1 . - CDS 7398 - 14474 4260 ## EcSMS35_1146 putative invasin - Prom 14698 - 14757 5.6 - TRNA 14788 - 14863 87.1 # Asn GTT 0 0 - Term 14818 - 14856 -0.8 8 6 Op 2 . - CDS 14964 - 15761 395 ## COG3228 Uncharacterized protein conserved in bacteria - Prom 15885 - 15944 80.3 + TRNA 15855 - 15944 75.5 # Ser CGA 0 0 - Term 16229 - 16264 2.3 9 7 Tu 1 . - CDS 16514 - 17044 251 ## COG3038 Cytochrome B561 - Prom 17123 - 17182 4.0 - Term 17252 - 17296 9.1 10 8 Tu 1 . - CDS 17387 - 18058 402 ## COG3443 Predicted periplasmic or secreted protein - Prom 18164 - 18223 5.5 - Term 18201 - 18256 1.1 11 9 Op 1 13/0.000 - CDS 18294 - 18929 471 ## COG2717 Predicted membrane protein 12 9 Op 2 3/0.786 - CDS 18930 - 19934 888 ## COG2041 Sulfite oxidase and related enzymes 13 10 Tu 1 . - CDS 20043 - 20456 299 ## COG2351 Transthyretin-like protein - Prom 20501 - 20560 5.2 + Prom 20404 - 20463 4.8 14 11 Tu 1 . + CDS 20541 - 21260 230 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 21412 - 21471 4.1 15 12 Tu 1 . + CDS 21716 - 22618 279 ## COG0642 Signal transduction histidine kinase + Term 22658 - 22703 7.2 - Term 22644 - 22690 9.2 16 13 Tu 1 . - CDS 22726 - 23577 728 ## COG0693 Putative intracellular protease/amidase - Term 24082 - 24124 8.1 17 14 Tu 1 . - CDS 24168 - 25226 1117 ## COG3203 Outer membrane protein (porin) - Prom 25318 - 25377 9.3 + Prom 25643 - 25702 7.1 18 15 Op 1 . + CDS 25855 - 26157 306 ## c2382 hypothetical protein 19 15 Op 2 4/0.571 + CDS 26197 - 26892 559 ## COG1418 Predicted HD superfamily hydrolase 20 15 Op 3 6/0.071 + CDS 26959 - 28377 1417 ## COG0270 Site-specific DNA methylase 21 15 Op 4 . + CDS 28358 - 28828 450 ## COG3727 DNA G:T-mismatch repair endonuclease 22 16 Tu 1 . - CDS 28817 - 29737 951 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 29763 - 29822 5.0 + Prom 29755 - 29814 4.2 23 17 Op 1 3/0.786 + CDS 29916 - 30827 1059 ## COG2354 Uncharacterized protein conserved in bacteria 24 17 Op 2 2/0.857 + CDS 30906 - 31088 215 ## COG5475 Uncharacterized small protein + Prom 31177 - 31236 4.5 25 18 Tu 1 . + CDS 31277 - 32953 1360 ## COG2199 FOG: GGDEF domain + Term 33126 - 33162 3.7 26 19 Tu 1 . - CDS 32950 - 33765 708 ## COG3769 Predicted hydrolase (HAD superfamily) 27 20 Tu 1 . - CDS 34063 - 34290 271 ## G2583_2404 hypothetical protein - Prom 34349 - 34408 4.2 28 21 Tu 1 . + CDS 34453 - 34641 343 ## LF82_0529 protein DsrB + Term 34733 - 34778 4.0 29 22 Tu 1 . - CDS 34685 - 35308 391 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 35460 - 35519 2.7 30 23 Op 1 17/0.000 - CDS 35598 - 36383 702 ## COG1684 Flagellar biosynthesis pathway, component FliR 31 23 Op 2 16/0.000 - CDS 36392 - 36661 424 ## COG1987 Flagellar biosynthesis pathway, component FliQ 32 23 Op 3 6/0.071 - CDS 36671 - 37408 666 ## COG1338 Flagellar biosynthesis pathway, component FliP 33 23 Op 4 6/0.071 - CDS 37408 - 37773 255 ## COG3190 Flagellar biogenesis protein 34 23 Op 5 20/0.000 - CDS 37776 - 38189 528 ## COG1886 Flagellar motor switch/type III secretory pathway protein 35 23 Op 6 13/0.000 - CDS 38186 - 39190 982 ## COG1868 Flagellar motor switch protein 36 23 Op 7 7/0.071 - CDS 39195 - 39659 438 ## COG1580 Flagellar basal body-associated protein - Prom 39692 - 39751 2.2 37 24 Op 1 8/0.000 - CDS 39764 - 40891 749 ## COG3144 Flagellar hook-length control protein 38 24 Op 2 12/0.000 - CDS 40888 - 41331 513 ## COG2882 Flagellar biosynthesis chaperone 39 24 Op 3 13/0.000 - CDS 41350 - 42723 1560 ## COG1157 Flagellar biosynthesis/type III secretory pathway ATPase 40 24 Op 4 15/0.000 - CDS 42723 - 43409 845 ## COG1317 Flagellar biosynthesis/type III secretory pathway protein 41 24 Op 5 19/0.000 - CDS 43402 - 44397 1301 ## COG1536 Flagellar motor switch protein 42 24 Op 6 . - CDS 44390 - 46048 1596 ## COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein - Prom 46134 - 46193 2.2 + Prom 46180 - 46239 3.6 43 25 Tu 1 . + CDS 46263 - 46577 451 ## COG1677 Flagellar hook-basal body protein - Term 46702 - 46732 2.0 44 26 Tu 1 . - CDS 46970 - 47638 506 ## COG2135 Uncharacterized conserved protein - Prom 47658 - 47717 2.6 45 27 Op 1 10/0.000 - CDS 47745 - 47978 287 ## COG0425 Predicted redox protein, regulator of disulfide bond formation 46 27 Op 2 . - CDS 47975 - 49180 1547 ## COG2391 Predicted transporter component - Prom 49247 - 49306 3.8 + Prom 49206 - 49265 6.8 47 28 Tu 1 . + CDS 49367 - 49780 545 ## SDY_1087 hypothetical protein + Term 49788 - 49822 5.0 - Term 49774 - 49808 5.0 48 29 Op 1 . - CDS 49814 - 51301 1486 ## COG0366 Glycosidases 49 29 Op 2 . - CDS 51379 - 51744 450 ## EcolC_1713 flagellar biosynthesis protein FliT 50 29 Op 3 15/0.000 - CDS 51744 - 52154 442 ## COG1516 Flagellin-specific chaperone FliS 51 29 Op 4 . - CDS 52169 - 53581 1377 ## COG1345 Flagellar capping protein - Prom 53795 - 53854 2.6 + Prom 53683 - 53742 3.8 52 30 Tu 1 . + CDS 53836 - 55314 1501 ## COG1344 Flagellin and related hook-associated proteins + Term 55334 - 55364 4.1 + Prom 55390 - 55449 3.0 53 31 Op 1 . + CDS 55479 - 56198 781 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit 54 31 Op 2 . + CDS 56247 - 56795 287 ## G2583_2372 protein FliZ + Prom 56799 - 56858 4.0 55 31 Op 3 2/0.857 + CDS 56883 - 57683 1220 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 57693 - 57746 3.9 + Prom 57701 - 57760 8.0 56 32 Op 1 1/0.857 + CDS 57788 - 58774 1116 ## COG2515 1-aminocyclopropane-1-carboxylate deaminase 57 32 Op 2 34/0.000 + CDS 58789 - 59457 703 ## COG0765 ABC-type amino acid transport system, permease component 58 32 Op 3 5/0.214 + CDS 59454 - 60206 660 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 60352 - 60400 5.2 + Prom 60298 - 60357 7.7 59 33 Tu 1 . + CDS 60472 - 61158 421 ## COG2771 DNA-binding HTH domain-containing proteins + Term 61191 - 61231 4.2 - Term 61177 - 61217 8.0 60 34 Tu 1 . - CDS 61225 - 61449 368 ## ECDH10B_2056 hypothetical protein - Prom 61640 - 61699 5.5 + Prom 61805 - 61864 5.2 61 35 Op 1 3/0.786 + CDS 61908 - 62564 513 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 62 35 Op 2 9/0.000 + CDS 62627 - 64393 1508 ## COG0322 Nuclease subunit of the excinuclease complex 63 35 Op 3 1/0.857 + CDS 64450 - 64998 264 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + TRNA 65150 - 65225 93.7 # Gly GCC 0 0 + TRNA 65279 - 65352 51.5 # Cys GCA 0 0 + TRNA 65365 - 65451 71.6 # Leu TAA 0 0 + Prom 65505 - 65564 2.9 64 36 Tu 1 . + CDS 65646 - 66311 761 ## COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA + Term 66316 - 66369 3.6 - Term 66309 - 66350 2.5 65 37 Tu 1 . - CDS 66373 - 67551 1147 ## COG0814 Amino acid permeases - Prom 67673 - 67732 6.6 + Prom 67643 - 67702 6.2 66 38 Tu 1 . + CDS 67775 - 68014 317 ## SSON_1212 hypothetical protein - Term 68010 - 68044 6.6 67 39 Tu 1 . - CDS 68052 - 68549 682 ## COG1528 Ferritin-like protein - Prom 68583 - 68642 7.9 68 40 Tu 1 . + CDS 69507 - 69758 304 ## B21_01860 hypothetical protein + Term 69764 - 69803 7.4 - Term 69748 - 69795 7.9 69 41 Tu 1 . - CDS 69837 - 70340 515 ## COG1528 Ferritin-like protein - Prom 70520 - 70579 6.8 + Prom 71028 - 71087 5.1 70 42 Op 1 16/0.000 + CDS 71137 - 72126 1227 ## COG1879 ABC-type sugar transport system, periplasmic component 71 42 Op 2 21/0.000 + CDS 72196 - 73710 183 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 72 42 Op 3 1/0.857 + CDS 73725 - 74711 1037 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components + Term 74750 - 74787 6.1 + Prom 74766 - 74825 3.8 73 43 Op 1 8/0.000 + CDS 74878 - 75678 655 ## COG1877 Trehalose-6-phosphatase 74 43 Op 2 . + CDS 75653 - 77077 1211 ## COG0380 Trehalose-6-phosphate synthase - Term 77003 - 77032 2.5 75 44 Tu 1 . - CDS 77084 - 77512 377 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Prom 78035 - 78094 4.5 76 45 Op 1 . + CDS 78292 - 78642 300 ## EC55989_2071 transcriptional activator FlhD 77 45 Op 2 . + CDS 78645 - 79223 368 ## ECSP_2465 transcriptional activator FlhC + Term 79250 - 79287 7.2 78 46 Op 1 19/0.000 + CDS 79350 - 80237 988 ## COG1291 Flagellar motor component 79 46 Op 2 5/0.214 + CDS 80234 - 81160 655 ## COG1360 Flagellar motor protein 80 46 Op 3 20/0.000 + CDS 81171 - 83129 1644 ## COG0643 Chemotaxis protein histidine kinase and related kinases 81 46 Op 4 17/0.000 + CDS 83150 - 83653 624 ## COG0835 Chemotaxis signal transduction protein + Term 83679 - 83717 4.5 + Prom 83693 - 83752 5.0 82 46 Op 5 13/0.000 + CDS 83798 - 85459 1470 ## COG0840 Methyl-accepting chemotaxis protein 83 46 Op 6 9/0.000 + CDS 85505 - 87106 1575 ## COG0840 Methyl-accepting chemotaxis protein 84 46 Op 7 13/0.000 + CDS 87170 - 87985 597 ## COG1352 Methylase of chemotaxis methyl-accepting proteins 85 46 Op 8 18/0.000 + CDS 87988 - 89037 783 ## COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 86 46 Op 9 8/0.000 + CDS 89052 - 89441 525 ## COG0784 FOG: CheY-like receiver 87 46 Op 10 4/0.571 + CDS 89452 - 90096 783 ## COG3143 Chemotaxis protein + Prom 90131 - 90190 2.8 88 47 Op 1 13/0.000 + CDS 90298 - 91446 1107 ## COG1377 Flagellar biosynthesis pathway, component FlhB 89 47 Op 2 . + CDS 91439 - 93517 1993 ## COG1298 Flagellar biosynthesis pathway, component FlhA 90 47 Op 3 . + CDS 93517 - 93909 155 ## B21_01838 hypothetical protein + Term 94072 - 94117 -1.0 91 48 Tu 1 . - CDS 94029 - 94517 204 ## COG3755 Uncharacterized protein conserved in bacteria - Prom 94613 - 94672 4.4 - Term 94631 - 94677 10.2 92 49 Tu 1 . - CDS 94694 - 96427 2256 ## COG0018 Arginyl-tRNA synthetase - Prom 96486 - 96545 4.1 + Prom 96560 - 96619 4.1 93 50 Op 1 3/0.786 + CDS 96643 - 97209 428 ## COG3102 Uncharacterized protein conserved in bacteria 94 50 Op 2 1/0.857 + CDS 97223 - 97969 443 ## COG3142 Uncharacterized protein involved in copper resistance + Term 97981 - 98016 2.0 + Prom 98112 - 98171 8.7 95 51 Op 1 7/0.071 + CDS 98357 - 99457 540 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 96 51 Op 2 . + CDS 99482 - 101911 2609 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 101963 - 102001 3.0 Predicted protein(s) >gi|299857048|gb|ADWS01000016.1| GENE 1 3 - 1208 702 401 aa, chain + ## HITS:1 COG:yeeO KEGG:ns NR:ns ## COG: yeeO COG0534 # Protein_GI_number: 16129928 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 1 401 147 547 547 723 99.0 0 IDLGTTVVVAFSLGKRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATT EVKALALTYLELTVLSYPAVAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYG LFSWPGLGFVGAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMG IGIPASVESVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITG RRLGVGQIAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGLMASFYTQDPQVKHVVVILIWL NALFMPIWSASWVLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVGVWMG MFADWAVRAVLFYWRMVTGRWLWKYPRPEPQKCEKKPVVSE >gi|299857048|gb|ADWS01000016.1| GENE 2 1837 - 2553 677 238 aa, chain - ## HITS:1 COG:yeeN KEGG:ns NR:ns ## COG: yeeN COG0217 # Protein_GI_number: 16129927 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 238 1 238 238 440 99.0 1e-124 MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVP KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGN IGAAGSVSYMFDNTGVIVFKGSDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKG IAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL >gi|299857048|gb|ADWS01000016.1| GENE 3 2896 - 4350 1051 484 aa, chain - ## HITS:1 COG:ECs2779 KEGG:ns NR:ns ## COG: ECs2779 COG0775 # Protein_GI_number: 15832033 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Escherichia coli O157:H7 # 1 484 1 484 484 999 100.0 0 MNNKGSGLTPAQALDKLDALYEQSVVALRNAIGNYITSGELPDENARKQGLFVYPSLTVT WDGSTTNPPKTRAFGRFTHAGSYTTTITRPTLFRSYLNEQLTLLYQDYGAHISVQPSQHE IPYPYVIDGSELTLDRSMSAGLTRYFPTTELAQIGDETADGIYHPTEFSPLSHFDARRVD FSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGNWIT AETEAPEEAISDLAWKKHQMPAWHLITADGQGITLVNIGVGPSNAKTICDHLAVLRPDVW LMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKLVSG RPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESATIAAQGYRFRVPY GTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNE PPFR >gi|299857048|gb|ADWS01000016.1| GENE 4 4452 - 5210 506 252 aa, chain - ## HITS:1 COG:shiA KEGG:ns NR:ns ## COG: shiA COG0477 # Protein_GI_number: 16129925 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 252 187 438 438 477 99.0 1e-134 MTTDEQFLSWGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHYQAAAKKRIPVIEALL RHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNMGLPRELFLNIGLLVGGLSCLTIPCF AWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQP MFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALITYFAGNWHSVAIYLLAGCLISA MTALLMKDNQRA >gi|299857048|gb|ADWS01000016.1| GENE 5 5296 - 5769 553 157 aa, chain - ## HITS:1 COG:shiA KEGG:ns NR:ns ## COG: shiA COG0477 # Protein_GI_number: 16129925 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 156 1 156 438 286 100.0 1e-77 MDSTLISTRPDEGTLSLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA MGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTI GWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKK >gi|299857048|gb|ADWS01000016.1| GENE 6 6084 - 7136 237 350 aa, chain + ## HITS:1 COG:ECs2777 KEGG:ns NR:ns ## COG: ECs2777 COG0859 # Protein_GI_number: 15832031 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 1 350 1 350 350 664 97.0 0 MFLASLLRRIAFSYYDYKAYNFNIEKTDFVVIHIPDQIGDAMAIFPVIRALELHKIKHLL IVTSTINLEVFNALKLEKTKLTLVTMTMQDHATLKEIKDLAKNITQQYGTPDLCIEAMRK KNLKTMIFISQLKAKTNFQVVGLTMKCYSPLCKNASRMDQNLRTPVPMTWAFMMREAGFP AVRPIYELPLSEDVLDEVREEMRSLGSYIALNLEGSSQERTFSLSIAENLIAKIQSETDI PIVIVHGPKGEDKARVLVDCYNNVYRLSLSPSIKRSAAIIKDAYIAITPDTSILHMASAY NTPVVAIYADYKTRWPAMADVSESVVVGQKIDNISLDEFAKALKSVLARI >gi|299857048|gb|ADWS01000016.1| GENE 7 7398 - 14474 4260 2358 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_1146 NR:ns ## KEGG: EcSMS35_1146 # Name: not_defined # Def: putative invasin # Organism: E.coli_SECEC # Pathway: not_defined # 1 2358 1 2358 2358 3914 97.0 0 MATKKRSGEEINDRQILCGMGIKLRRLTAGICLITQLAFPMAAAAQGVVNTATQQPVPAQ IAIANANTVPYTLGALESAQSVAERFGISVAELRKLNQFRTFARGFDNVRQGDELDVPAQ VSENNLTPPPGNSSGNLEQQIASTSQPIGSLLAEDMNSEQAANMARGWASSQASGAMTDW LSRFGTARITLGVDEDFSLKNSQFDFLHPWYETPDNLFFSQHTLHRTDERTQINNGLGWR HFTPTWMSGINFFFDHDLSRYHSRAGIGAEYWRDYLKLSSNGYLRLTNWRSAPELDNDYE ARPANGWDVRAEGWLPAWPYLGGKLVYEQYYGDEVALFDKDDRQSNPHAITAGLNYTPFP LMTFSAEQRQGKQGENDTRFAVDFTWQPGSAMQKQLDPNEVAARRSLAGSRYDLVDRNNN IVLEYRKKELVRLTLTDPVTGKSGEVKSLVSSLQTKYALKGYNVEATALEAAGGKVVTTG KDILVTLPAYRFTSTPETDNTWPIEVTAEDVKGNLSNREQSMVVVQAPTLSQKDSSVSLS TQTLNADSHSTATLTFIAHDAAGNPVVGLVLSTRHEGVQDITLSEWKDNGDGSYTQILTT GAMSGTLTLMPQLNGVDAAKAPAVVNIISISSSRTHSSIKIDKDRYLSGNPIEVTVELRD ENDKPVKEQKQQLNNAVSIDNVKPGVTTDWKETADGVYKATYTAYTKGSGLTAKLLMQNW NEDLHTAGFIIDANPQSAKIATLSASNNGVLANENAANTVSVNVADEGSNPINDHTVTFA VLSGSATSFNNQNTAKTDVNGLATFDLKSSKQEDNTVEVTLENGVKQTLIVSFVGDSSTA QVELQKSKNEVVADGNDSATMTATVRDAKGNLLNDVKVTFNVNSAEAKLSQTEVNSHDGI ATATLTSLKNGDYRVTASVSSGSQANQQVIFIGDQSTAALTLSVPSGDITVTNTAPLHMT ATLQDKNGNPLKDKEITFSVPNDVASRFSISNSGKGMTDSNGTAIASLTGTLAGTHMITA RLANSNVSDTQPMTFVADKDRAVVVLQTSKAEIIGNGVDETTLTATVKDPSNHPVAGITV NFTMPQDVAANFTLENNGIAITQANGEAHVTLKGKKAGTHTVTATLGNNNTSDSQPVTFV ADKASAQVVLQISKDEITGNGVDSATLTATVKDQFDNEVNNLPVTFSSASSGLTLTPGVS NTNESGIAQATIAGVAFGEQTVTASLANNGASDNKTVHFIGDTAAAKIIELTPVPDSIIA GTPQNSTGSVITATVVDNNGFPVKGVIVNFTSRTNSAEMTNGGQAVTNEQGKATVTYTNT RSSIESGARPDTVEASLENGNSTLSTSINVNADASTAHLTLLHALFDTVSAGETTSLYIE VKDNYGNGVPQHQVTLSVSPSEGVTLSNNGIYTTNYYGYFYASFTATKAGVYQVTATLDN GDSMQQTVTYVPNVANAEITLAASKDPVIADNNDLTTLTATVADTEGNAIANTEVTFTLP EDVRANFTLSDGGKAITDTEGKAKVTLKGLKAGAHTVTASMAGSKSGQLVVNFTADTLTA QVNLNVTEDNFIANNIGMTKLQATVTDGNGNPFANEAVTFTLPADVSASFTLGQGGSAIT DINGKAEVTLSGTKSGTYPVTVSVINYGVSDTKQVTLIADAGTATLASLTSVYSFVVSTT EGATMTASVTDANGNPVEGIKVNFRGTSVTLSSTSVETDDQGFAEILVTSTEVGLKTVSA SLADKPTEVISRLLNAKADINSATITSLEIPEGQLMVAQDVAVKAHVNDQFGNPILNESV TFSAEPPEHMTISQNIVSTDTHGIAEVSMTPERNGSYMVKASLANGASLEKQLEAIDEKL TLTASSPLIGVYAPTGTTLTATLTSANGTPVEGQVINFSVTPEGATLSGGKVRTNSSGQA PVVLTSNKVGTYTVTASFHNGVTIQTQTTVKVTGNSSTAHVASFIADPSTIAATNSDLST LKATVEDGSGNLIEGLTVYFALKSGSATLTSLTAVTDQNGIATTSVKGAMTGSVTVSAVT TAGGMQTVDITLVAGPADASQSVLKNNRSSLKGDFTDSAELHLVLHDISGNPIKVSEGME FVQSGTNVPYMKISAIDYSQNINGDYKATITGGGEGIATLIPVLNGVHQAGLSTTIQFTR AEDKIMSGTVSVNGTDLPTTTFPSQGFTGAYYQLNNDNFAPGKTAADYEFSSSASWVDVD ATGKVTFKNVGSNWERITATPKSGGPSYVYEIRVKSWWVNSGDAFMIYSLAENFCSSNGY TLPRADHLNHSRSRGIGSLYSEWGDMGHYTTEAGFQSNMYWSSSPANSSEQYVVSLATGD QSVFEKLGFAYATCYKNL >gi|299857048|gb|ADWS01000016.1| GENE 8 14964 - 15761 395 265 aa, chain - ## HITS:1 COG:ECs2774 KEGG:ns NR:ns ## COG: ECs2774 COG3228 # Protein_GI_number: 15832028 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 265 14 278 278 528 99.0 1e-150 MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAERFLQQKRLVPLQGFEL DSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQ SWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPFIPLREVAGWEHDL HAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQ FYQQDPLQRLHRTNDTDSFSATNVH >gi|299857048|gb|ADWS01000016.1| GENE 9 16514 - 17044 251 176 aa, chain - ## HITS:1 COG:yodB KEGG:ns NR:ns ## COG: yodB COG3038 # Protein_GI_number: 16129920 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Escherichia coli K12 # 1 176 11 186 186 329 100.0 2e-90 MNRFSKTQIYLHWITLLFVAITYAAMELRGWFPKGSSTYLLMRETHYNAGIFVWVLMFSR LIIKHRYSDPSIVPPPPAWQMKAASLMHIMLYITFLALPLLGIALMAYSGKSWSFLGFNV SPFVTPNSEIKALIKNIHETWANIGYFLIAAHAGAALFHHYIQKDNTLLRMMPRRK >gi|299857048|gb|ADWS01000016.1| GENE 10 17387 - 18058 402 223 aa, chain - ## HITS:1 COG:yodA KEGG:ns NR:ns ## COG: yodA COG3443 # Protein_GI_number: 16129919 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted protein # Organism: Escherichia coli K12 # 8 223 1 216 216 432 98.0 1e-121 MTLEETVLAIRLHKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGVFDDANVQNR TLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYATDIEMIGIEDG IIEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPKYIQFSDHIIAPRK SSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH >gi|299857048|gb|ADWS01000016.1| GENE 11 18294 - 18929 471 211 aa, chain - ## HITS:1 COG:yedZ KEGG:ns NR:ns ## COG: yedZ COG2717 # Protein_GI_number: 16129918 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 211 1 211 211 342 100.0 3e-94 MRLTAKQVTWLKVCLHLAGLLPFLWLVWAINHGGLGADPVKDIQHFTGRTALKFLLATLL ITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGVNNLALLGKELITRPYLTL GIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAILAPIHYLWSVKIISPQPLIYA GLAVLLLALRYKKLRSLFNRLRKQVHNKLSV >gi|299857048|gb|ADWS01000016.1| GENE 12 18930 - 19934 888 334 aa, chain - ## HITS:1 COG:ECs2709 KEGG:ns NR:ns ## COG: ECs2709 COG2041 # Protein_GI_number: 15831963 # Func_class: R General function prediction only # Function: Sulfite oxidase and related enzymes # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 670 99.0 0 MKKNQFLKESDVTAESVFFMKRRQVLKALGISAAALSLPHAAHADLLSWFKGNDRPPAPA GKPLEFSKPAAWQNNLPLTPADKVSGYNNFYEFGLDKADPAANAGSLKTDPWTLKISGEV AKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFPLHKLLALAEPTSNAKYVAFE TIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLTLMTVGVYGKALPPQNGAPVRLI VPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYGFYANVNPHVDHPRWSQATERFIGS GGILDVQRQPTLLFNGYADQVASLYRGLDLRENF >gi|299857048|gb|ADWS01000016.1| GENE 13 20043 - 20456 299 137 aa, chain - ## HITS:1 COG:ECs2708 KEGG:ns NR:ns ## COG: ECs2708 COG2351 # Protein_GI_number: 15831962 # Func_class: R General function prediction only # Function: Transthyretin-like protein # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 270 99.0 7e-73 MLKRYLVLSVATAAFSLPSLVYAAQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQL NTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHY HVPLLLSQYGYSTYRGS >gi|299857048|gb|ADWS01000016.1| GENE 14 20541 - 21260 230 239 aa, chain + ## HITS:1 COG:ECs2707 KEGG:ns NR:ns ## COG: ECs2707 COG0745 # Protein_GI_number: 15831961 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 459 99.0 1e-129 MNQAVSITYDLWHIIFMKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSF SELLARVRAQLRQHHALNSSLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLASRAG EIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK >gi|299857048|gb|ADWS01000016.1| GENE 15 21716 - 22618 279 300 aa, chain + ## HITS:1 COG:yedV KEGG:ns NR:ns ## COG: yedV COG0642 # Protein_GI_number: 16129914 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 300 153 452 452 569 98.0 1e-162 MLEQYKINSIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALP RELKPLGQALNKMHQALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQ KTIAGNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEI CFKVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSHIHITSFLDTNGYLNIDVASPGTK IHEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRIMLPQRN >gi|299857048|gb|ADWS01000016.1| GENE 16 22726 - 23577 728 283 aa, chain - ## HITS:1 COG:yedU KEGG:ns NR:ns ## COG: yedU COG0693 # Protein_GI_number: 16129913 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli K12 # 1 283 1 283 283 576 99.0 1e-164 MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERY LPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHKDEKVMPFF EQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRF VISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTPDIGYMPGHLTWYFGEELKKMGM NIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYAG >gi|299857048|gb|ADWS01000016.1| GENE 17 24168 - 25226 1117 352 aa, chain - ## HITS:1 COG:STM1572 KEGG:ns NR:ns ## COG: STM1572 COG3203 # Protein_GI_number: 16764916 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 352 1 362 362 341 55.0 1e-93 MKRKVLAMLVPALLVAGAANAAEIYNKNGNKLDLYGKMVGERILTDRENGEKGDNSQDTS YARVGVKGETQINPELTGYGQFELDLEASNRHNPDQTRLAYAGLSYKDFGSFDYGRNVGV AYDAEAFTDMFVEWGGDSWAGTDLFMTNRTNGVATYRNTDFFGMVEGLNFALQYQGKNEG TGNYKANGDGHGLSVTYTIDGFSFAGAYANSDRTDFQSSDSKGEKAEVWALSTKYDANNV YAAVMYGESHNMNSDDGDVVNKTQNFEAVLQYQFDFGLRPSIGYSYSKALDVAGYKDSDR LNYIEIGTWYYFNKNMNVYTAYQINLLDKSDYVLAHGLNTDDQLAFGIVYQF >gi|299857048|gb|ADWS01000016.1| GENE 18 25855 - 26157 306 100 aa, chain + ## HITS:1 COG:no KEGG:c2382 NR:ns ## KEGG: c2382 # Name: yedR # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 100 28 127 127 184 99.0 7e-46 MEYGSTKMEERLSRSPGGKLALWAFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGS TAGKWLGALVGFLFMALVGALLGGIAWYTRPRPARSRRYE >gi|299857048|gb|ADWS01000016.1| GENE 19 26197 - 26892 559 231 aa, chain + ## HITS:1 COG:yedJ KEGG:ns NR:ns ## COG: yedJ COG1418 # Protein_GI_number: 16129908 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Escherichia coli K12 # 1 231 1 231 231 417 98.0 1e-117 MDVQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDI VSLAKNHPQRQRSSILAAEETRRLLREEFVQFPAEKIEAVCHAIAAHSFSAQIAPLTTEA KIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDKRYALDHFQTKLLK LPQTMQTARGKQLAQHNAQFLVEFMAKLSAELAGENEGVDHKVIDAFSPAG >gi|299857048|gb|ADWS01000016.1| GENE 20 26959 - 28377 1417 472 aa, chain + ## HITS:1 COG:ECs2699 KEGG:ns NR:ns ## COG: ECs2699 COG0270 # Protein_GI_number: 15831953 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Escherichia coli O157:H7 # 1 472 1 472 472 959 99.0 0 MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENHWSAAILKRALANDSAW HRLSEIEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHA VRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPF SLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRI IMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDIS ECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVT RTLSARYYKDGAEILIDRGWDMATGEKDFDDPLNQQHRPRRLTPRECARLMGFEAPGEAK FRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQQEAQHGRRSR >gi|299857048|gb|ADWS01000016.1| GENE 21 28358 - 28828 450 156 aa, chain + ## HITS:1 COG:vsr KEGG:ns NR:ns ## COG: vsr COG3727 # Protein_GI_number: 16129906 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Escherichia coli K12 # 1 156 1 156 156 313 99.0 1e-85 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR GREKLTDEALSERLEEWICGEGASAQIDTQGIHLLA >gi|299857048|gb|ADWS01000016.1| GENE 22 28817 - 29737 951 306 aa, chain - ## HITS:1 COG:ECs2697 KEGG:ns NR:ns ## COG: ECs2697 COG0697 # Protein_GI_number: 15831951 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 450 99.0 1e-126 MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGH KLPPLRPLLNAAVIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIK TRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMA GAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPA LATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAKPVVAPVI QDASSE >gi|299857048|gb|ADWS01000016.1| GENE 23 29916 - 30827 1059 303 aa, chain + ## HITS:1 COG:yedI KEGG:ns NR:ns ## COG: yedI COG2354 # Protein_GI_number: 16129904 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 303 3 305 305 500 99.0 1e-141 MAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPA QSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIA LVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFL VGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVAKIRG QAH >gi|299857048|gb|ADWS01000016.1| GENE 24 30906 - 31088 215 60 aa, chain + ## HITS:1 COG:ECs2695 KEGG:ns NR:ns ## COG: ECs2695 COG5475 # Protein_GI_number: 15831949 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli O157:H7 # 1 60 1 60 60 101 98.0 4e-22 MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHEIELVPGEGSRSAEEV >gi|299857048|gb|ADWS01000016.1| GENE 25 31277 - 32953 1360 558 aa, chain + ## HITS:1 COG:yedQ_2 KEGG:ns NR:ns ## COG: yedQ_2 COG2199 # Protein_GI_number: 16129902 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 380 558 1 179 179 353 99.0 3e-97 MENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANA LDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRNAVTEFEQHRDEHAWQIELNRRRTLPV NGVLDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVST QPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDS NNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRLLTSSNPDHPTGNIFDPRE LALLAQAMEHDTRGGIRMNSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLW ALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILP GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR LYLAKQAGRNRVCASDNA >gi|299857048|gb|ADWS01000016.1| GENE 26 32950 - 33765 708 271 aa, chain - ## HITS:1 COG:ECs2693 KEGG:ns NR:ns ## COG: ECs2693 COG3769 # Protein_GI_number: 15831947 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 271 1 271 271 535 98.0 1e-152 MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLSRLREANVPVILCSSKTSAEMLYLQKT LGLQGLPLIAENGAVIQLAEQWQDIDGFPRIISGISHGEISQVLNTLREKEHFKFTTFDD VDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWH VLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVH LHDEDPAHVWRTQREGPEGWREGLDHFFSAR >gi|299857048|gb|ADWS01000016.1| GENE 27 34063 - 34290 271 75 aa, chain - ## HITS:1 COG:no KEGG:G2583_2404 NR:ns ## KEGG: G2583_2404 # Name: yodD # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 75 6 80 80 112 100.0 4e-24 MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADA FELDIHDFSVSEVNR >gi|299857048|gb|ADWS01000016.1| GENE 28 34453 - 34641 343 62 aa, chain + ## HITS:1 COG:no KEGG:LF82_0529 NR:ns ## KEGG: LF82_0529 # Name: dsrB # Def: protein DsrB # Organism: E.coli_LF82 # Pathway: not_defined # 1 62 1 62 62 124 100.0 1e-27 MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEK AE >gi|299857048|gb|ADWS01000016.1| GENE 29 34685 - 35308 391 207 aa, chain - ## HITS:1 COG:ECs2690 KEGG:ns NR:ns ## COG: ECs2690 COG2771 # Protein_GI_number: 15831944 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 379 99.0 1e-105 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH DASNSQHIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI KTHNKQVIYHVVRLTDNVTNGIFVNMR >gi|299857048|gb|ADWS01000016.1| GENE 30 35598 - 36383 702 261 aa, chain - ## HITS:1 COG:fliR KEGG:ns NR:ns ## COG: fliR COG1684 # Protein_GI_number: 16129897 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliR # Organism: Escherichia coli K12 # 1 261 1 261 261 365 98.0 1e-101 MMQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMITFAIAPSLPA NDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHL NMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIGGEPLNSNAFLALTKAGSLIF LNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFC EHLFSEIFNLLADIISELPLI >gi|299857048|gb|ADWS01000016.1| GENE 31 36392 - 36661 424 89 aa, chain - ## HITS:1 COG:STM1980 KEGG:ns NR:ns ## COG: STM1980 COG1987 # Protein_GI_number: 16765318 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliQ # Organism: Salmonella typhimurium LT2 # 1 89 1 89 89 98 95.0 3e-21 MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFI AIIIAGPWMLNLLLDYVRTLFTNLPYIIG >gi|299857048|gb|ADWS01000016.1| GENE 32 36671 - 37408 666 245 aa, chain - ## HITS:1 COG:ECs2687 KEGG:ns NR:ns ## COG: ECs2687 COG1338 # Protein_GI_number: 15831941 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliP # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 392 100.0 1e-109 MRRLLSVAPVLLWLITPLAFAQLPGITSQPLPGGGQSWSLPVQTLVFITSLTFIPAILLM MTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEK ISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQGPEAVPMRILLPAYVTSELK TAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA QSFYS >gi|299857048|gb|ADWS01000016.1| GENE 33 37408 - 37773 255 121 aa, chain - ## HITS:1 COG:STM1978 KEGG:ns NR:ns ## COG: STM1978 COG3190 # Protein_GI_number: 16765316 # Func_class: N Cell motility # Function: Flagellar biogenesis protein # Organism: Salmonella typhimurium LT2 # 1 121 2 125 125 132 66.0 1e-31 MNNHATVQSSAPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASA SLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEIPQPDFQSVMKNLLKRSGR S >gi|299857048|gb|ADWS01000016.1| GENE 34 37776 - 38189 528 137 aa, chain - ## HITS:1 COG:ECs2685 KEGG:ns NR:ns ## COG: ECs2685 COG1886 # Protein_GI_number: 15831939 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar motor switch/type III secretory pathway protein # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 245 100.0 1e-65 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGGGDVSGTLQDIDLIMDI PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV RITDIITPSERMRRLSR >gi|299857048|gb|ADWS01000016.1| GENE 35 38186 - 39190 982 334 aa, chain - ## HITS:1 COG:ECs2684 KEGG:ns NR:ns ## COG: ECs2684 COG1868 # Protein_GI_number: 15831938 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 649 100.0 0 MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQRRVVRERLQALEIINER FARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSP SLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKLALEGYSDAWKAINPLEVEYV RSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSR NEDQNWRDNLVRQVQHSQLELVANFADISLRLSQILKLKPGDVLPIEKPDRIIAHVDGVP VLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK >gi|299857048|gb|ADWS01000016.1| GENE 36 39195 - 39659 438 154 aa, chain - ## HITS:1 COG:ECs2683 KEGG:ns NR:ns ## COG: ECs2683 COG1580 # Protein_GI_number: 15831937 # Func_class: N Cell motility # Function: Flagellar basal body-associated protein # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 289 100.0 2e-78 MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADDKAQQRVVPSPVFYALD TFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKK NLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR >gi|299857048|gb|ADWS01000016.1| GENE 37 39764 - 40891 749 375 aa, chain - ## HITS:1 COG:ECs2682 KEGG:ns NR:ns ## COG: ECs2682 COG3144 # Protein_GI_number: 15831936 # Func_class: N Cell motility # Function: Flagellar hook-length control protein # Organism: Escherichia coli O157:H7 # 1 375 1 375 375 526 97.0 1e-149 MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTDKAAPQLLVATDKPTTK GEPLVSEILADAQQADLLIPVDETPPVINDEQSTSTPLTTAQTMTLAAVADKNTTKDEKA DDLNEDVTASLSALFAMLPGFDNTPKVTDVPSTVLPAEKPTLFTKLTSAQLTTAQPDDAP GTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPHQTQPLPTVAAPVLSAPLGSHEW QHSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLKVDDNQAQIQMVSPHQHVRAALEAA LPVLRTQLAESGIQLGQSNISGESFSGQQQAASQQQQSQRTANHEPLAGEDDDTLPVPVS LQGRVTGNSGVDIFA >gi|299857048|gb|ADWS01000016.1| GENE 38 40888 - 41331 513 147 aa, chain - ## HITS:1 COG:fliJ KEGG:ns NR:ns ## COG: fliJ COG2882 # Protein_GI_number: 16129889 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar biosynthesis chaperone # Organism: Escherichia coli K12 # 1 147 1 147 147 206 99.0 2e-53 MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRNNLNSDMSAG MTSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWREKKQRLQAWQTLQERQST AALLAENRLDQKKMDEFAQRAAMRKPE >gi|299857048|gb|ADWS01000016.1| GENE 39 41350 - 42723 1560 457 aa, chain - ## HITS:1 COG:ZfliI KEGG:ns NR:ns ## COG: ZfliI COG1157 # Protein_GI_number: 15802376 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway ATPase # Organism: Escherichia coli O157:H7 EDL933 # 13 457 52 496 496 825 99.0 0 MTTRLTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGLQLPLGATCVIERQNGT ETHEVESEVVGFNGQRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGKQLPLGPALLGRV LDGSGKPLDGLPSPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGL FAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPAD VSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPS VFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEA GHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDK AIALWPQLEGYLQQGIFERADWEASLQGLERIFPTVS >gi|299857048|gb|ADWS01000016.1| GENE 40 42723 - 43409 845 228 aa, chain - ## HITS:1 COG:fliH KEGG:ns NR:ns ## COG: fliH COG1317 # Protein_GI_number: 16129887 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway protein # Organism: Escherichia coli K12 # 1 228 8 235 235 361 98.0 1e-100 MSDNLPWKTWTPDDLAPPQAEFVPMVEPEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGI AEGRQQGHEQGYQEGLARGLEQGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRL MQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGAT LSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV >gi|299857048|gb|ADWS01000016.1| GENE 41 43402 - 44397 1301 331 aa, chain - ## HITS:1 COG:ECs2678 KEGG:ns NR:ns ## COG: ECs2678 COG1536 # Protein_GI_number: 15831932 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 551 100.0 1e-157 MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANVTQISNKQLTDVLAEFE QEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRDTASGIETLNFMEPQSAAD LIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLRIATFGGVQPAALAELTEVLN GLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLV DVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLRNMSQRAADILRDDLANRGPVRLSQ VENEQKAILLIVRRLAETGEMVIGSGEDTYV >gi|299857048|gb|ADWS01000016.1| GENE 42 44390 - 46048 1596 552 aa, chain - ## HITS:1 COG:fliF KEGG:ns NR:ns ## COG: fliF COG1766 # Protein_GI_number: 16129885 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway lipoprotein # Organism: Escherichia coli K12 # 1 552 1 552 552 966 99.0 0 MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDG GAIVSQLTQMNIPYRFSEASGAIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEKFGI SQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPG RALDEGQISAIVHLVSSAVAGLPLGNVTLVDQGGHLLTQSNTSGRDLNDAQLKYASDVEG RIQRRIEAILSPIVGNGNIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQ SGSGYPGGVPGALSNQPAPANNAPISTPPANQNNRQQQASTTSNSGPRSTQRNETSNYEV DRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGKPLPLSNEQMKQIEDLTREAMGFSEKRGD SLNVVNSPFNSSDESGGELPFWQQQAFIDQLLAAGRWLLVLLVAWLLWRKAVRPQLTRRA EAMKAVQQQAQAREEVEDAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRVVA LVIRQWINNDHE >gi|299857048|gb|ADWS01000016.1| GENE 43 46263 - 46577 451 104 aa, chain + ## HITS:1 COG:ECs2676 KEGG:ns NR:ns ## COG: ECs2676 COG1677 # Protein_GI_number: 15831930 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar hook-basal body protein # Organism: Escherichia coli O157:H7 # 1 104 1 104 104 144 99.0 5e-35 MSAIQGIEGVISQLQATAMSARAQDSLPQPTISFAGQLHAALDRISDTQTAARTQAEKFT LGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV >gi|299857048|gb|ADWS01000016.1| GENE 44 46970 - 47638 506 222 aa, chain - ## HITS:1 COG:ZyedK KEGG:ns NR:ns ## COG: ZyedK COG2135 # Protein_GI_number: 15802366 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 1 222 1 222 222 445 98.0 1e-125 MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKVLLLSERDEHLHLDPVF WGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIYR ADGQPVFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIHDRRPLVLSPEAAREWMRQDI GGKEASEIAASGCVPANQFSWHPVSRAVGNIKNQGAELIQPV >gi|299857048|gb|ADWS01000016.1| GENE 45 47745 - 47978 287 77 aa, chain - ## HITS:1 COG:ECs2669 KEGG:ns NR:ns ## COG: ECs2669 COG0425 # Protein_GI_number: 15831923 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 77 1 77 77 144 98.0 5e-35 MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVMSDCPQSINNIPLDARNHGYT VLDIQQDGPTIRYLIQK >gi|299857048|gb|ADWS01000016.1| GENE 46 47975 - 49180 1547 401 aa, chain - ## HITS:1 COG:yedE KEGG:ns NR:ns ## COG: yedE COG2391 # Protein_GI_number: 16129876 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Escherichia coli K12 # 1 401 1 401 401 706 99.0 0 MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQLLQLFGVHA EEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVKLRMPRSRIRIMQAIIGGI IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSWFGARFTLLPIFRIPVKMQKV SAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQPKLGLAMLFGVGFGLLIERAQI CFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYVQLGVEPKIMWAGPNAVIGGLLFGF GIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTILAYYWDDFAPALATDWDKINLLKT FGPMGGLLVTYLLLFTALMLIIGWEKRFFRRAAPQTAKEIA >gi|299857048|gb|ADWS01000016.1| GENE 47 49367 - 49780 545 137 aa, chain + ## HITS:1 COG:no KEGG:SDY_1087 NR:ns ## KEGG: SDY_1087 # Name: yedD # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 137 1 137 137 265 100.0 4e-70 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT AECAAALDKAPLPTPLP >gi|299857048|gb|ADWS01000016.1| GENE 48 49814 - 51301 1486 495 aa, chain - ## HITS:1 COG:amyA KEGG:ns NR:ns ## COG: amyA COG0366 # Protein_GI_number: 16129874 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 495 1 495 495 1030 99.0 0 MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPAYKGASGGYSVGYDSYD LFDLGEFDQKGSIPTKYGDKAQLLAAIDALKRNDIAVLLDVVVNHKMGADEKEAIRVQRV NADDRTQIDEEIIECEGWTRYTFPARAGQYSKFIWDFKCFSGIDHIENPDEDGIFKIVND YTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKYWARWVMEQTQCDGFRLDAVKHI PAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQTYIDQVEGKTMLFDAPLQMKFHEAS RMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLREN GVPSVFYPDLYGAHYEDVGGDGQTYPIDMPIIEQLDELILARQRFAHGVQTLFFDHPNCI AFSRSGTDEYPGCVVVMSNGDDGEKTINLGENYGNKTWRDFLGNRQESVVTDENGEATFF CNGGSVSVWVIEEVI >gi|299857048|gb|ADWS01000016.1| GENE 49 51379 - 51744 450 121 aa, chain - ## HITS:1 COG:no KEGG:EcolC_1713 NR:ns ## KEGG: EcolC_1713 # Name: not_defined # Def: flagellar biosynthesis protein FliT # Organism: E.coli_ATCC8739 # Pathway: Flagellar assembly [PATH:ecl02040] # 1 120 1 120 121 205 99.0 3e-52 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEINPSTTM QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNF L >gi|299857048|gb|ADWS01000016.1| GENE 50 51744 - 52154 442 136 aa, chain - ## HITS:1 COG:ECs2664 KEGG:ns NR:ns ## COG: ECs2664 COG1516 # Protein_GI_number: 15831918 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellin-specific chaperone FliS # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 219 96.0 1e-57 MYTASGSKAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARLFMQDNNQQGKGVSLSK AINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLRNDVSAVEEVEALMRNIAD AWKESLLSPSLIQDPV >gi|299857048|gb|ADWS01000016.1| GENE 51 52169 - 53581 1377 470 aa, chain - ## HITS:1 COG:STM1960 KEGG:ns NR:ns ## COG: STM1960 COG1345 # Protein_GI_number: 16765298 # Func_class: N Cell motility # Function: Flagellar capping protein # Organism: Salmonella typhimurium LT2 # 1 470 1 467 467 522 75.0 1e-148 MASFTSLGVGSNLPLDTLLNNLTIAEKKRLNPITQQQSDNTARLTAYGTLKSALEKFQTA NTALNKADLFKSTTVTSSNEDLKVSTEAGAAPGIYTISVTQLAQAQSLRTDSPTIIASTK DALGDESSDTRTIKITQDGRKEPLEIKLNKDQTSLDEISKAINDADSGISASIVKVKDGD YQLVLTASEGLANKMTISVEGDSKLNDLLAYDSKTNTGNMKELVNAQNAQLNVNGIDIER SSNKITDAPQGVTLDLTQKVTDVRVTVTKSNDKATEAIKGWVDSYNSLIDTFNTLTKYKE VDPGAEAQDKNNGALLGDSVVRTIQSGIRAQFANGASDGAFKTLNELGIKQDGTTGKLKI DDDKLKKVLNENTASVRELLVGDGKETGITTKIATEVKGYLADDGIIDSAQDSINATLKK LTKQYLSVSASIDDTVARYTAQFTQLDTMMSKLNNTSTYLSQQFTAMSNS >gi|299857048|gb|ADWS01000016.1| GENE 52 53836 - 55314 1501 492 aa, chain + ## HITS:1 COG:STM2771 KEGG:ns NR:ns ## COG: STM2771 COG1344 # Protein_GI_number: 16766083 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Salmonella typhimurium LT2 # 1 492 1 506 506 329 53.0 9e-90 MAQVINTNSLSLLTQNNLNKSQSSLSSAIERLSSGLRINSAKDDAAGQAIANRFTANIKG LTQASRNANDGISVAQTTEGALNEINNNLQRIRELSVQATNGTNSDSDLSSIQAEITQRL EEIDRVSEQTQFNGVKVLAENNEMKIQVGANDGETITINLAKIDAKTLGLDGFNIDGAQK ATGSDLISKFKATGTDNYDVGGKTYTVNVESGAVKNDANKDVFVSAADGSLTTSSDTKVS GESIDATELAKLAIKLADKGSIEYKGITFTNNTGAELDANGKGVLTANIDGQDVQFTIDS NAPTGAGATITTDTAVYKNSAGQFTTTKVENKAATLSDLDLNAAKKTGSTLVVNGATYNV SADGKTVTDTTPGAPKVMYLSKSEGGSPILVNEDAAKSLQSTTNPLETIDKALAKVDNLR SDLGAVQNRFDSAITNLGNTVNNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQA NQTTQNVLSLLR >gi|299857048|gb|ADWS01000016.1| GENE 53 55479 - 56198 781 239 aa, chain + ## HITS:1 COG:ECs2661 KEGG:ns NR:ns ## COG: ECs2661 COG1191 # Protein_GI_number: 15831915 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 416 100.0 1e-116 MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL >gi|299857048|gb|ADWS01000016.1| GENE 54 56247 - 56795 287 182 aa, chain + ## HITS:1 COG:no KEGG:G2583_2372 NR:ns ## KEGG: G2583_2372 # Name: fliZ # Def: protein FliZ # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 182 14 195 195 366 98.0 1e-100 MVQHLKRRPLSRYLKDFKHSQTHCAHCRKLLDRITLVRDGKIVNKIEISRLDTLLDENGW QTEQKSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVREYVVRLRRLGNHL HEQNISLEQLQDGFLDEILAPWLPTTSTNNYRIALRKYQHYQRQTCSGLVQKSSSLPASD IY >gi|299857048|gb|ADWS01000016.1| GENE 55 56883 - 57683 1220 266 aa, chain + ## HITS:1 COG:ECs2659 KEGG:ns NR:ns ## COG: ECs2659 COG0834 # Protein_GI_number: 15831913 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 488 99.0 1e-138 MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD GKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF STPYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDP TKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVN DAIAEMQKDGTLQALSEKWFGADVTK >gi|299857048|gb|ADWS01000016.1| GENE 56 57788 - 58774 1116 328 aa, chain + ## HITS:1 COG:yedO KEGG:ns NR:ns ## COG: yedO COG2515 # Protein_GI_number: 16129866 # Func_class: E Amino acid transport and metabolism # Function: 1-aminocyclopropane-1-carboxylate deaminase # Organism: Escherichia coli K12 # 1 328 33 360 360 647 100.0 0 MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAA DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLD LFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC EGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS QKRFKDEGPILFIHTGGAPALFAYHPHV >gi|299857048|gb|ADWS01000016.1| GENE 57 58789 - 59457 703 222 aa, chain + ## HITS:1 COG:yecS KEGG:ns NR:ns ## COG: yecS COG0765 # Protein_GI_number: 16129865 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 222 1 222 222 396 100.0 1e-110 MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYIS IFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWE AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS RTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQEREPK >gi|299857048|gb|ADWS01000016.1| GENE 58 59454 - 60206 660 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 246 2 241 245 258 51 6e-68 MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTI TVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEE ATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELV GEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALFADPQQPRT RQFLEKFLLQ >gi|299857048|gb|ADWS01000016.1| GENE 59 60472 - 61158 421 228 aa, chain + ## HITS:1 COG:sdiA KEGG:ns NR:ns ## COG: sdiA COG2771 # Protein_GI_number: 16129863 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli K12 # 1 228 13 240 240 446 98.0 1e-125 MLLRFQRMEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPESWVSYYQ AKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGF LSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILKWTA EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI >gi|299857048|gb|ADWS01000016.1| GENE 60 61225 - 61449 368 74 aa, chain - ## HITS:1 COG:no KEGG:ECDH10B_2056 NR:ns ## KEGG: ECDH10B_2056 # Name: yecF # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 74 1 74 74 103 100.0 1e-21 MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLKMEKQLALIEDETQAAV FSKTVKQIKQAYRQ >gi|299857048|gb|ADWS01000016.1| GENE 61 61908 - 62564 513 218 aa, chain + ## HITS:1 COG:uvrY KEGG:ns NR:ns ## COG: uvrY COG2197 # Protein_GI_number: 16129861 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli K12 # 1 218 1 218 218 416 100.0 1e-116 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ >gi|299857048|gb|ADWS01000016.1| GENE 62 62627 - 64393 1508 588 aa, chain + ## HITS:1 COG:ECs2651 KEGG:ns NR:ns ## COG: ECs2651 COG0322 # Protein_GI_number: 15831905 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1193 100.0 0 MYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEH NYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETL ALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGK DDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAG MACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFN LSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTA LASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAM NQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADR KAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIE GVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH >gi|299857048|gb|ADWS01000016.1| GENE 63 64450 - 64998 264 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 9 175 486 665 904 106 38 5e-22 MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQST RFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIAREIIISALREWMAELGKRSS VAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVAAVLTLWSMLQYLSAARADLL EQ >gi|299857048|gb|ADWS01000016.1| GENE 64 65646 - 66311 761 221 aa, chain + ## HITS:1 COG:yecA KEGG:ns NR:ns ## COG: yecA COG3318 # Protein_GI_number: 16129858 # Func_class: R General function prediction only # Function: Predicted metal-binding protein related to the C-terminal domain of SecA # Organism: Escherichia coli K12 # 1 221 1 221 221 437 100.0 1e-122 MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPEQWLVAVWGGA DYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFG YMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAALDLHA YWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQCCLH >gi|299857048|gb|ADWS01000016.1| GENE 65 66373 - 67551 1147 392 aa, chain - ## HITS:1 COG:ECs2615 KEGG:ns NR:ns ## COG: ECs2615 COG0814 # Protein_GI_number: 15831869 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 392 12 403 403 643 99.0 0 MAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVPADTGLGTLA KRYLGRYGQWLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSATAGVLLFTFVA GGVVCVGTSLVDLFNRFLFSAKIIFLVVMLVLLLPHIHKVNLLTLPLQQGLALSAIPVIF TSFGFHGSVPSIVSYMDGNVRKLRWVFITGSAIPLVAYIFWQVATLGSIDSTTFMGLLAN HAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLADLFQRSNTVGGR LQTGAITFLPPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVK GGRPALVVVFLCGIAVIGVQFLIAAGLLPEVG >gi|299857048|gb|ADWS01000016.1| GENE 66 67775 - 68014 317 79 aa, chain + ## HITS:1 COG:no KEGG:SSON_1212 NR:ns ## KEGG: SSON_1212 # Name: yecH # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 79 1 79 79 144 100.0 1e-33 MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSAEGMTAGELVAFLAAKG KFIPSKDGFSTDQSKICRH >gi|299857048|gb|ADWS01000016.1| GENE 67 68052 - 68549 682 165 aa, chain - ## HITS:1 COG:ECs2613 KEGG:ns NR:ns ## COG: ECs2613 COG1528 # Protein_GI_number: 15831867 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Escherichia coli O157:H7 # 1 165 1 165 165 290 99.0 6e-79 MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDY LTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITLKINELAHAAMTNQDYPTFNFL QWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELSTLDTQN >gi|299857048|gb|ADWS01000016.1| GENE 68 69507 - 69758 304 83 aa, chain + ## HITS:1 COG:no KEGG:B21_01860 NR:ns ## KEGG: B21_01860 # Name: yecJ # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 83 1 83 83 138 100.0 5e-32 MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQLKNIDFTNHPAAADPV TMRAIQKAIALIELKFTPQGESH >gi|299857048|gb|ADWS01000016.1| GENE 69 69837 - 70340 515 167 aa, chain - ## HITS:1 COG:ECs2610 KEGG:ns NR:ns ## COG: ECs2610 COG1528 # Protein_GI_number: 15831864 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 296 100.0 1e-80 MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLRAQAQSNVTQMMRMFNF MKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLAQLADEAKELNDDSTVNFL RDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLNVVSHQLH >gi|299857048|gb|ADWS01000016.1| GENE 70 71137 - 72126 1227 329 aa, chain + ## HITS:1 COG:araF KEGG:ns NR:ns ## COG: araF COG1879 # Protein_GI_number: 16129851 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 329 1 329 329 634 100.0 0 MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIK IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKG KPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMD ALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATE GQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVEP PKFTEVTDVVLITRDNFKEELEKKGLGGK >gi|299857048|gb|ADWS01000016.1| GENE 71 72196 - 73710 183 504 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 275 477 20 217 245 75 25 1e-12 MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPT TGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSLL NYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREID NLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDHDALVQAM VGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSELMK GLFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISAR RKHVLGGCVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKV ILLDEPTRGIDVGAKHEIYNVIYALAAQGVAVLFASSDLPEVLGVADRIVVMREGEIAGE LLHEQADERQALSLAMPKVSQAVA >gi|299857048|gb|ADWS01000016.1| GENE 72 73725 - 74711 1037 328 aa, chain + ## HITS:1 COG:araH KEGG:ns NR:ns ## COG: araH COG1172 # Protein_GI_number: 16132221 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 328 2 329 329 519 99.0 1e-147 MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISM SGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGLLLGILCGLVN GFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFGLPAPIWLT VACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILA SRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISP FAQYVVRGLILLAAVIFDRYKQKAKRTV >gi|299857048|gb|ADWS01000016.1| GENE 73 74878 - 75678 655 266 aa, chain + ## HITS:1 COG:otsB KEGG:ns NR:ns ## COG: otsB COG1877 # Protein_GI_number: 16129849 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphatase # Organism: Escherichia coli K12 # 1 266 1 266 266 531 100.0 1e-151 MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALIS GRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGA ELEAKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQQGKCVVEIKPRGTSKGEAIA AFMQEAPFIGRTPVFLGDDLTDESGFAVVNRLGGMSVKIGTGATQASWRLAGVPDVWSWL EMITTALQQKRENNRSDDYESFSRSI >gi|299857048|gb|ADWS01000016.1| GENE 74 75653 - 77077 1211 474 aa, chain + ## HITS:1 COG:otsA KEGG:ns NR:ns ## COG: otsA COG0380 # Protein_GI_number: 16129848 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphate synthase # Organism: Escherichia coli K12 # 1 474 1 474 474 959 100.0 0 MSRLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGN ITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPL LQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDY DLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGP LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS RGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMS LAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAESQQRDKVATFPKLA >gi|299857048|gb|ADWS01000016.1| GENE 75 77084 - 77512 377 142 aa, chain - ## HITS:1 COG:ECs2603 KEGG:ns NR:ns ## COG: ECs2603 COG0589 # Protein_GI_number: 15831857 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 142 1 142 142 270 98.0 7e-73 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV MQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHKHHFDLVICGNHNHSFFSRAS CSAKRVIASSEVDVLLVPLTGD >gi|299857048|gb|ADWS01000016.1| GENE 76 78292 - 78642 300 116 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2071 NR:ns ## KEGG: EC55989_2071 # Name: flhD # Def: transcriptional activator FlhD # Organism: E.coli_55989 # Pathway: Two-component system [PATH:eck02020]; Flagellar assembly [PATH:eck02040] # 1 116 4 119 119 196 100.0 3e-49 MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAET NQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA >gi|299857048|gb|ADWS01000016.1| GENE 77 78645 - 79223 368 192 aa, chain + ## HITS:1 COG:no KEGG:ECSP_2465 NR:ns ## KEGG: ECSP_2465 # Name: flhC # Def: transcriptional activator FlhC # Organism: E.coli_O157_TW14359 # Pathway: Two-component system [PATH:etw02020]; Flagellar assembly [PATH:etw02040] # 1 192 1 192 192 385 100.0 1e-106 MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFS TDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQCPQAEEGPLLALTRA WTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSQNPADII PQLLDEQRVQAV >gi|299857048|gb|ADWS01000016.1| GENE 78 79350 - 80237 988 295 aa, chain + ## HITS:1 COG:ECs2600 KEGG:ns NR:ns ## COG: ECs2600 COG1291 # Protein_GI_number: 15831854 # Func_class: N Cell motility # Function: Flagellar motor component # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 546 99.0 1e-155 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETSKMMQC VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQTTTEEA >gi|299857048|gb|ADWS01000016.1| GENE 79 80234 - 81160 655 308 aa, chain + ## HITS:1 COG:ECs2599 KEGG:ns NR:ns ## COG: ECs2599 COG1360 # Protein_GI_number: 15831853 # Func_class: N Cell motility # Function: Flagellar motor protein # Organism: Escherichia coli O157:H7 # 1 308 1 308 308 587 100.0 1e-168 MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAE YFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRG DLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIA PVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVG MAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVAPQVSVP TMPSAEPR >gi|299857048|gb|ADWS01000016.1| GENE 80 81171 - 83129 1644 652 aa, chain + ## HITS:1 COG:cheA KEGG:ns NR:ns ## COG: cheA COG0643 # Protein_GI_number: 16129840 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein histidine kinase and related kinases # Organism: Escherichia coli K12 # 1 652 3 654 654 1196 99.0 0 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA EQAPTGRVEREKTTRSSESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG AGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI QEMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA >gi|299857048|gb|ADWS01000016.1| GENE 81 83150 - 83653 624 167 aa, chain + ## HITS:1 COG:ECs2597 KEGG:ns NR:ns ## COG: ECs2597 COG0835 # Protein_GI_number: 15831851 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 293 100.0 1e-79 MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTN LRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAP EFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDSAASEVA >gi|299857048|gb|ADWS01000016.1| GENE 82 83798 - 85459 1470 553 aa, chain + ## HITS:1 COG:tar KEGG:ns NR:ns ## COG: tar COG0840 # Protein_GI_number: 16129838 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 1 553 1 553 553 897 100.0 0 MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLM LQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATS RNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNAMGEAFAQYALSSEKLYRDIV TDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLTPLAKIIAHIREIAGGNLANTLT IDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASAL EETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIA DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIE DSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDR VTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAASPLTNKPQTPSRPASEQPPAQPR LRIAEQDPNWETF >gi|299857048|gb|ADWS01000016.1| GENE 83 85505 - 87106 1575 533 aa, chain + ## HITS:1 COG:tap KEGG:ns NR:ns ## COG: tap COG0840 # Protein_GI_number: 16129837 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 1 533 1 533 533 829 99.0 0 MFNRIRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNQVEQSNQQRAALAQTRAVM LQASTALNKAGTLTALSYPADDIKTLMTTARASLTQSTTLFKSFMAMTAGNEHVRALQKE TEKSFARWHNDLEHQATWLESNQLSDFLTAPVQESQNAFDVNFEAWQLEINHVLEAASAQ SQRNYQISALVFISMIIVAAIYISSALWWTRKMIVQPLAIIGSHFDSIAAGNLARPIAVY GRNEITAIFASLKTMQQALRGTVSDVRKGSQEMHIGIAEIVAGNNDLSSRTEQQAASLAQ TAASMEQLTATVGQNADNARQASELAKNAATTAQAGGVQVSTMTHTMQEIATSSQKIGDI ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKGLIEES VNRVQQGSKLVNNAAATMIDIVSSVTRVNDIMGEIASASEEQQRGIEQVAQAVSQMDQVT QQNASLVEEAAVATEQLANQADHLSSRVAVFTLEEHEVARHESAQLQIAPVVS >gi|299857048|gb|ADWS01000016.1| GENE 84 87170 - 87985 597 271 aa, chain + ## HITS:1 COG:cheR KEGG:ns NR:ns ## COG: cheR COG1352 # Protein_GI_number: 16129836 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methylase of chemotaxis methyl-accepting proteins # Organism: Escherichia coli K12 # 1 271 16 286 286 541 99.0 1e-154 MTERLALSDAHFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLLES NQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYRVWSAAASTGEEPYSIAM TLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGL VRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQNTQQEILRRFVPLLKPD GLLFAGHSENFSHLERRFTLRGQTVYALSKD >gi|299857048|gb|ADWS01000016.1| GENE 85 87988 - 89037 783 349 aa, chain + ## HITS:1 COG:cheB KEGG:ns NR:ns ## COG: cheB COG2201 # Protein_GI_number: 16129835 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain # Organism: Escherichia coli K12 # 1 349 1 349 349 655 99.0 0 MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNPDVLTLDVEMP RMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAIDFVTKPQLGIREGMLAYS EMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIAIGASTGGTEAIRHVLQPLPL SSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGERVLPGHAYIAPGDRHMELSRSG ANYQIKIHDGPAVNRHRPSVDVLFHSVAKQAGRNAVGVILTGMGNDGAAGMLAMRQAGAW TLAQNEASCVVFGMPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI >gi|299857048|gb|ADWS01000016.1| GENE 86 89052 - 89441 525 129 aa, chain + ## HITS:1 COG:ECs2592 KEGG:ns NR:ns ## COG: ECs2592 COG0784 # Protein_GI_number: 15831846 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Escherichia coli O157:H7 # 1 129 1 129 129 234 100.0 4e-62 MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNM PNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKL NKIFEKLGM >gi|299857048|gb|ADWS01000016.1| GENE 87 89452 - 90096 783 214 aa, chain + ## HITS:1 COG:cheZ KEGG:ns NR:ns ## COG: cheZ COG3143 # Protein_GI_number: 16129833 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein # Organism: Escherichia coli K12 # 1 214 1 214 214 345 100.0 3e-95 MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPDARDRLYYVVQ MTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPIDLADARELVTDTRQFLAD VPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIERQLLMVLLENIPEQESRPKR ENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF >gi|299857048|gb|ADWS01000016.1| GENE 88 90298 - 91446 1107 382 aa, chain + ## HITS:1 COG:flhB KEGG:ns NR:ns ## COG: flhB COG1377 # Protein_GI_number: 16129832 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Escherichia coli K12 # 1 382 1 382 382 694 99.0 0 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFYLWHHWPQMMRLMAESPIT AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP VQPTHLPVPEALDFINEKPTHE >gi|299857048|gb|ADWS01000016.1| GENE 89 91439 - 93517 1993 692 aa, chain + ## HITS:1 COG:flhA KEGG:ns NR:ns ## COG: flhA COG1298 # Protein_GI_number: 16129831 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhA # Organism: Escherichia coli K12 # 1 692 1 692 692 1265 99.0 0 MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFILDLLFTFNIALSIMVLL VAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVG GNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDE AKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVINVVGGLLVGVLQHGMSMGHAAE SYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLG LLGLVPGMPNLVFLLFTAGLLGLAWWIRGREQKAPVEPKPVKMAENNTVVEATWNDVQLE DSLGMEVGYRLIPMVDFQQDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRI LMKGVEIGSGDAYPGRWLAINPGTAAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYT VVEASTVVATHLNHLISQHAAELFGRQEAQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKV LQNLLDEKVPIRDMRTILETLAEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVI GLDTPLERLLLQALQGGGGLEPGLADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSR FLRRSLPQLVVLSNLELSDNRHIRMTATIGGK >gi|299857048|gb|ADWS01000016.1| GENE 90 93517 - 93909 155 130 aa, chain + ## HITS:1 COG:no KEGG:B21_01838 NR:ns ## KEGG: B21_01838 # Name: flhE # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 130 1 130 130 218 100.0 4e-56 MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLSTRQPASGLMTLVAWRY QLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPLRFIWEVPGGGRLIPPLKV QRNEVIVNYR >gi|299857048|gb|ADWS01000016.1| GENE 91 94029 - 94517 204 162 aa, chain - ## HITS:1 COG:yecT KEGG:ns NR:ns ## COG: yecT COG3755 # Protein_GI_number: 16129829 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 162 8 169 169 310 98.0 5e-85 MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDTDINVIKSCLRQEYNLV DAQLNKAYGEAYRYIEQVPRTGVKKPDTEQLNLLKKSQRAWLDFRDKECELILSNEDVQD LSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLTRG >gi|299857048|gb|ADWS01000016.1| GENE 92 94694 - 96427 2256 577 aa, chain - ## HITS:1 COG:argS KEGG:ns NR:ns ## COG: argS COG0018 # Protein_GI_number: 16129828 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 577 1 577 577 1146 99.0 0 MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGMMAVAKKLGMAPRQLAE QVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHVQQALASDRLDVATPEKQTIVVDYS APNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQEN AGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQ ITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPM GVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPE SVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKL ANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQ LAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPIL SAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM >gi|299857048|gb|ADWS01000016.1| GENE 93 96643 - 97209 428 188 aa, chain + ## HITS:1 COG:yecM KEGG:ns NR:ns ## COG: yecM COG3102 # Protein_GI_number: 16129827 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 188 3 190 190 370 98.0 1e-103 MANWQSIDELQDIASDLPRFTHALDELSRRLGLNITPLTADHISLRCHQNVTAERWRRGF EQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEKRYPHEGWEHIEIVLPG DPETLNARALALLSDEGLSLPGISVKTSSPKGEHERLPNPTLAVTDGKTTIKFHPWSIEE IVASEQSA >gi|299857048|gb|ADWS01000016.1| GENE 94 97223 - 97969 443 248 aa, chain + ## HITS:1 COG:cutCm KEGG:ns NR:ns ## COG: cutCm COG3142 # Protein_GI_number: 16132223 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Escherichia coli K12 # 1 248 1 248 248 495 99.0 1e-140 MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRP RRGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTF HRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAHRDAPIIMAGAGVR AENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSSDEHADEYSRYIVDGAAVAEMKG IIERHQAK >gi|299857048|gb|ADWS01000016.1| GENE 95 98357 - 99457 540 366 aa, chain + ## HITS:1 COG:ECs2583 KEGG:ns NR:ns ## COG: ECs2583 COG3005 # Protein_GI_number: 15831837 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 728 98.0 0 MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHSMSKPFEEYQGTVHFSN QKGIRAECADCHIPKSGMDYLFSKLKASKDIYHEFVSGKIDSDDKFETHRQEMAETVWKE LKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKGGETCIDCHKGIAHFPPEIKMDDN AAHELESQAATSVTNGAHIYPFKTSRIGELATVNPGTDLTVVDASGKQPIVLLQGYQMQG SENTLYLAAGQRLALATLSEEGIKALTVNGEWQADEYGNQWRQASLQGALTDPALADRKP LWQYAEKLDDTYCAGCHAPIAADHYTVNAWPSIAKGMGARTSMSENELDILTRYFQYNTK DITEKQ >gi|299857048|gb|ADWS01000016.1| GENE 96 99482 - 101911 2609 809 aa, chain + ## HITS:1 COG:bisZ KEGG:ns NR:ns ## COG: bisZ COG0243 # Protein_GI_number: 16129825 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 809 7 815 815 1619 98.0 0 MTLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRWGAMNVEVKDGKIVSST GALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNPLQPAKGRGEDTYVQVSWEQALK LIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAA QVIMPHVVGSVEVYEQQTSWPLILENSQAVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLK KSGKPVIAIDPIRSETIEFFGDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKVFLEKYT TGYPQFEEYLTGKSDNTPKSAAWAAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQY GEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRVGGVLPEMSAAIAGQASEAAD DGGMTAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQ KPEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARN DFDVFADLAELLKPGGKEIYTEGKDEMAWLKFFYYAAQKGARAQRVTMPMFNAFWQQNKL IEMRRSEKNEQYVRYADFRADPVKNALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDE WKGTADEKQLQLLTAHPAHRLHSQLNYAELRKKYAVADREPITIHTEDAARFGIANGDLV RVWNKRGQILTGAVVTDGIKKGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANAC AGNSALVYIEKYTGNAPKLTAFDKPAVQA Prediction of potential genes in microbial genomes Time: Sun May 15 22:17:25 2011 Seq name: gi|299857047|gb|ADWS01000017.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont16.1, whole genome shotgun sequence Length of sequence - 101573 bp Number of predicted genes - 86, with homology - 86 Number of transcription units - 36, operones - 18 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 4/0.600 - CDS 3 - 714 468 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 2 1 Op 2 8/0.000 - CDS 788 - 2005 1454 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase - Prom 2025 - 2084 2.2 3 1 Op 3 4/0.600 - CDS 2134 - 3276 1443 ## COG1960 Acyl-CoA dehydrogenases 4 1 Op 4 . - CDS 3307 - 4821 1643 ## COG1292 Choline-glycine betaine transporter - Prom 4845 - 4904 10.8 + Prom 5158 - 5217 3.9 5 2 Op 1 29/0.000 + CDS 5295 - 6065 828 ## COG2086 Electron transfer flavoprotein, beta subunit 6 2 Op 2 9/0.000 + CDS 6080 - 7021 892 ## COG2025 Electron transfer flavoprotein, alpha subunit 7 2 Op 3 12/0.000 + CDS 7072 - 8358 1357 ## COG0644 Dehydrogenases (flavoproteins) 8 2 Op 4 4/0.600 + CDS 8355 - 8642 352 ## COG2440 Ferredoxin-like protein 9 2 Op 5 4/0.600 + CDS 8701 - 10032 1442 ## COG0477 Permeases of the major facilitator superfamily + Prom 10101 - 10160 4.4 10 3 Op 1 7/0.000 + CDS 10197 - 10670 517 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 11 3 Op 2 4/0.600 + CDS 10663 - 12525 1035 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 + Prom 12634 - 12693 4.6 12 4 Tu 1 . + CDS 12718 - 13197 678 ## COG0262 Dihydrofolate reductase + Term 13386 - 13425 -0.9 - Term 13277 - 13317 -0.6 13 5 Tu 1 . - CDS 13496 - 13765 207 ## ECO111_0051 hypothetical protein 14 6 Op 1 . - CDS 13999 - 14598 427 ## ECO111_0052 hypothetical protein 15 6 Op 2 8/0.000 - CDS 14623 - 15471 785 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 16 6 Op 3 8/0.000 - CDS 15478 - 15855 319 ## COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport 17 6 Op 4 12/0.000 - CDS 15858 - 16679 699 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 18 6 Op 5 13/0.000 - CDS 16676 - 17665 461 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 19 6 Op 6 16/0.000 - CDS 17665 - 18951 1370 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 20 6 Op 7 . - CDS 19004 - 21358 2101 ## COG1452 Organic solvent tolerance protein OstA - Prom 21503 - 21562 2.4 + Prom 21339 - 21398 3.3 21 7 Tu 1 . + CDS 21613 - 22428 859 ## COG1076 DnaJ-domain-containing proteins 1 + Term 22530 - 22574 6.1 22 8 Op 1 7/0.000 - CDS 22545 - 23204 218 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 23 8 Op 2 5/0.333 - CDS 23216 - 26122 3622 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 24 9 Op 1 3/0.667 - CDS 26287 - 28638 1872 ## COG0417 DNA polymerase elongation subunit (family B) - Term 28643 - 28683 5.8 25 9 Op 2 5/0.333 - CDS 28713 - 29408 696 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 29509 - 29568 2.6 - Term 29465 - 29501 -0.5 26 10 Op 1 7/0.000 - CDS 29577 - 31079 1584 ## COG2160 L-arabinose isomerase 27 10 Op 2 . - CDS 31090 - 32790 1665 ## COG1069 Ribulose kinase - Prom 32938 - 32997 4.2 + Prom 32897 - 32956 4.8 28 11 Op 1 4/0.600 + CDS 33078 - 34007 676 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 34011 - 34070 3.3 29 11 Op 2 . + CDS 34093 - 34857 852 ## COG0586 Uncharacterized membrane-associated protein - Term 34907 - 34945 1.3 30 12 Op 1 11/0.000 - CDS 34971 - 35669 283 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 31 12 Op 2 14/0.000 - CDS 35653 - 37263 1640 ## COG1178 ABC-type Fe3+ transport system, permease component 32 12 Op 3 2/0.667 - CDS 37239 - 38222 1045 ## COG4143 ABC-type thiamine transport system, periplasmic component - Term 38229 - 38280 9.0 33 13 Tu 1 . - CDS 38386 - 40041 1407 ## COG4533 ABC-type uncharacterized transport system, periplasmic component + Prom 40049 - 40108 3.1 34 14 Tu 1 . + CDS 40130 - 40261 153 ## ECIAI1_0070 hypothetical protein + Term 40307 - 40339 1.5 + Prom 40288 - 40347 8.0 35 15 Tu 1 . + CDS 40381 - 41541 859 ## COG0477 Permeases of the major facilitator superfamily - Term 41551 - 41582 4.8 36 16 Op 1 30/0.000 - CDS 41590 - 42195 858 ## COG0066 3-isopropylmalate dehydratase small subunit 37 16 Op 2 10/0.000 - CDS 42206 - 43606 1624 ## COG0065 3-isopropylmalate dehydratase large subunit 38 16 Op 3 11/0.000 - CDS 43609 - 44700 1248 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 39 16 Op 4 3/0.667 - CDS 44700 - 45332 810 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 40 16 Op 5 . - CDS 45244 - 46272 907 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 41 17 Tu 1 . + CDS 47093 - 48055 810 ## COG0583 Transcriptional regulator + Term 48058 - 48116 17.7 + Prom 48098 - 48157 9.5 42 18 Op 1 32/0.000 + CDS 48373 - 50097 1441 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 43 18 Op 2 3/0.667 + CDS 50100 - 50591 513 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Term 50617 - 50649 1.5 + Prom 50683 - 50742 5.7 44 19 Tu 1 . + CDS 50771 - 51775 1079 ## COG1609 Transcriptional regulators + Prom 52273 - 52332 4.1 45 20 Op 1 29/0.000 + CDS 52377 - 52835 266 ## COG2001 Uncharacterized protein conserved in bacteria 46 20 Op 2 12/0.000 + CDS 52840 - 53778 1099 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 47 20 Op 3 12/0.000 + CDS 53775 - 54140 311 ## COG3116 Cell division protein 48 20 Op 4 26/0.000 + CDS 54156 - 55922 1645 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 49 20 Op 5 26/0.000 + CDS 55909 - 57396 1486 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 50 20 Op 6 28/0.000 + CDS 57393 - 58751 1315 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 51 20 Op 7 28/0.000 + CDS 58745 - 59827 1356 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 52 20 Op 8 25/0.000 + CDS 59830 - 61146 1331 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 53 20 Op 9 31/0.000 + CDS 61146 - 62390 1478 ## COG0772 Bacterial cell division membrane protein 54 20 Op 10 26/0.000 + CDS 62387 - 63454 946 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 55 20 Op 11 11/0.000 + CDS 63508 - 64983 1506 ## COG0773 UDP-N-acetylmuramate-alanine ligase 56 20 Op 12 18/0.000 + CDS 64976 - 65896 1069 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 57 20 Op 13 25/0.000 + CDS 65898 - 66728 618 ## COG1589 Cell division septal protein 58 20 Op 14 35/0.000 + CDS 66725 - 67987 1176 ## COG0849 Actin-like ATPase involved in cell division 59 20 Op 15 11/0.000 + CDS 68048 - 69199 1339 ## COG0206 Cell division GTPase + Prom 69210 - 69269 1.8 60 20 Op 16 . + CDS 69300 - 70217 819 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase + Term 70244 - 70301 2.1 + Prom 70264 - 70323 4.2 61 21 Op 1 . + CDS 70372 - 70959 285 ## G2583_0101 secretion monitor protein + Term 70990 - 71018 0.5 62 21 Op 2 8/0.000 + CDS 71021 - 73726 3477 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) + Term 73748 - 73778 3.0 63 21 Op 3 . + CDS 73786 - 74175 337 ## PROTEIN SUPPORTED gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 74207 - 74251 3.7 64 22 Op 1 7/0.000 - CDS 74275 - 74472 100 ## COG3024 Uncharacterized protein conserved in bacteria 65 22 Op 2 7/0.000 - CDS 74482 - 75225 744 ## COG4582 Uncharacterized protein conserved in bacteria 66 22 Op 3 . - CDS 75225 - 75845 625 ## COG0237 Dephospho-CoA kinase - Prom 75947 - 76006 4.8 + Prom 75803 - 75862 3.0 67 23 Tu 1 . + CDS 76070 - 77113 989 ## COG0516 IMP dehydrogenase/GMP reductase + Term 77122 - 77159 7.7 68 24 Op 1 24/0.000 - CDS 77148 - 78350 845 ## COG1459 Type II secretory pathway, component PulF 69 24 Op 2 8/0.000 - CDS 78340 - 79725 860 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 70 24 Op 3 5/0.333 - CDS 79735 - 80175 487 ## COG4969 Tfp pilus assembly protein, major pilin PilA - Prom 80252 - 80311 3.5 71 25 Tu 1 . - CDS 80378 - 81271 460 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 - Prom 81292 - 81351 2.0 + Prom 81089 - 81148 2.0 72 26 Op 1 6/0.133 + CDS 81359 - 81910 501 ## COG3023 Negative regulator of beta-lactamase expression 73 26 Op 2 . + CDS 81907 - 82761 807 ## COG3725 Membrane protein required for beta-lactamase induction - Term 82754 - 82799 2.5 74 27 Tu 1 . - CDS 82804 - 84174 1461 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 84266 - 84325 5.2 + Prom 84445 - 84504 7.4 75 28 Tu 1 . + CDS 84718 - 85482 681 ## COG2186 Transcriptional regulators + Term 85487 - 85526 2.8 + Prom 85507 - 85566 1.7 76 29 Op 1 13/0.000 + CDS 85643 - 88306 3421 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component 77 29 Op 2 30/0.000 + CDS 88321 - 90213 2196 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes + Term 90220 - 90253 5.2 + Prom 90284 - 90343 7.8 78 29 Op 3 . + CDS 90538 - 91962 682 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 91986 - 92041 5.0 - Term 91985 - 92014 -0.9 79 30 Tu 1 . - CDS 92033 - 93790 644 ## EC55989_0110 hypothetical protein - Prom 94004 - 94063 4.4 + Prom 93979 - 94038 8.6 80 31 Tu 1 . + CDS 94145 - 96742 3095 ## COG1049 Aconitase B + Term 96778 - 96815 6.1 + Prom 96768 - 96827 4.1 81 32 Tu 1 . + CDS 96917 - 97279 467 ## COG3112 Uncharacterized protein conserved in bacteria + Term 97435 - 97473 2.2 - Term 97271 - 97312 10.2 82 33 Op 1 9/0.000 - CDS 97317 - 98111 777 ## COG1586 S-adenosylmethionine decarboxylase 83 33 Op 2 . - CDS 98127 - 98993 847 ## COG0421 Spermidine synthase - Prom 99032 - 99091 4.8 - Term 99040 - 99073 3.8 84 34 Tu 1 . - CDS 99099 - 99446 336 ## ECSE_0122 hypothetical protein - Prom 99588 - 99647 2.0 + Prom 99514 - 99573 4.8 85 35 Tu 1 . + CDS 99612 - 101162 1597 ## COG2132 Putative multicopper oxidases + Term 101228 - 101266 3.0 - Term 101215 - 101252 2.2 86 36 Tu 1 . - CDS 101336 - 101542 125 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|299857047|gb|ADWS01000017.1| GENE 1 3 - 714 468 237 aa, chain - ## HITS:1 COG:ECs0040 KEGG:ns NR:ns ## COG: ECs0040 COG0318 # Protein_GI_number: 15829294 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 1 231 6 236 522 505 100.0 1e-143 MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIR KGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFY PMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILF TSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAF >gi|299857047|gb|ADWS01000017.1| GENE 2 788 - 2005 1454 405 aa, chain - ## HITS:1 COG:caiB KEGG:ns NR:ns ## COG: caiB COG1804 # Protein_GI_number: 16128032 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 1 405 1 405 405 831 99.0 0 MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQ LSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVI AHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAA LAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYK CADGYIVMELVGITQIEECFKDIGLAHLLSTPEIPEGTQLIHRIECPYGPLVEEKLDAWL AAHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKF KNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED >gi|299857047|gb|ADWS01000017.1| GENE 3 2134 - 3276 1443 380 aa, chain - ## HITS:1 COG:ECs0042 KEGG:ns NR:ns ## COG: ECs0042 COG1960 # Protein_GI_number: 15829296 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 1 380 1 380 380 788 100.0 0 MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEH GGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMW NSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVY TEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHE RFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEA AWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVS GGSDEMQILTLGRAVLKQYR >gi|299857047|gb|ADWS01000017.1| GENE 4 3307 - 4821 1643 504 aa, chain - ## HITS:1 COG:caiT KEGG:ns NR:ns ## COG: caiT COG1292 # Protein_GI_number: 16128034 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli K12 # 1 504 1 504 504 935 100.0 0 MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMV VMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPP FGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVG EKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWI ILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRM LFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTW ILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATV TLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGG CPLFFVNIMVTLSFIKDAKQNWKD >gi|299857047|gb|ADWS01000017.1| GENE 5 5295 - 6065 828 256 aa, chain + ## HITS:1 COG:ECs0044 KEGG:ns NR:ns ## COG: ECs0044 COG2086 # Protein_GI_number: 15829298 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli O157:H7 # 1 256 13 268 268 426 100.0 1e-119 MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTAL SVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGD GSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAV STDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGD GEEQIAAFAENLRKVI >gi|299857047|gb|ADWS01000017.1| GENE 6 6080 - 7021 892 313 aa, chain + ## HITS:1 COG:fixB KEGG:ns NR:ns ## COG: fixB COG2025 # Protein_GI_number: 16128036 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli K12 # 1 313 1 313 313 601 99.0 1e-172 MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGVQAIQLGANHVWKLNGKPD DRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGK ATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRT ATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEH ERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDA VKILPALTAALAR >gi|299857047|gb|ADWS01000017.1| GENE 7 7072 - 8358 1357 428 aa, chain + ## HITS:1 COG:fixC KEGG:ns NR:ns ## COG: fixC COG0644 # Protein_GI_number: 16128037 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli K12 # 1 428 1 428 428 812 99.0 0 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIP GFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSLRSYSVLRSKFDAWLMEQAEE AGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTD VAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCG LHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIA GDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDM RMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKD GMKGVTVL >gi|299857047|gb|ADWS01000017.1| GENE 8 8355 - 8642 352 95 aa, chain + ## HITS:1 COG:ECs0047 KEGG:ns NR:ns ## COG: ECs0047 COG2440 # Protein_GI_number: 15829301 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Escherichia coli O157:H7 # 1 95 1 95 95 200 100.0 4e-52 MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDY AGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG >gi|299857047|gb|ADWS01000017.1| GENE 9 8701 - 10032 1442 443 aa, chain + ## HITS:1 COG:yaaU KEGG:ns NR:ns ## COG: yaaU COG0477 # Protein_GI_number: 16128039 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 443 1 443 443 834 100.0 0 MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGA GTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVI GADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAA IPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRR HFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPM LWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPN ELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAF APETRGMSLAQTSNMTIRGQRMG >gi|299857047|gb|ADWS01000017.1| GENE 10 10197 - 10670 517 157 aa, chain + ## HITS:1 COG:yabF KEGG:ns NR:ns ## COG: yabF COG2249 # Protein_GI_number: 16128040 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 1 157 20 176 176 312 99.0 2e-85 MLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWID KVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNW LPPFAMHCTFICDDETLEGQARRYKQRLLEWQEAHHG >gi|299857047|gb|ADWS01000017.1| GENE 11 10663 - 12525 1035 620 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 6 586 9 612 618 403 38 1e-111 MDSHTLVQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAE IGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVAELIGM TLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLAASSASTTMGA FALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLS MAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLLENPLRIVILL LGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSL TLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLS SGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQL TEMVKEHFPHLQIIARARDVDHYIRLHQAGVEKPERETFEGALKTGRLALESLGLGPYEA RERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQG TEEGKHTGNMADEPETKPSS >gi|299857047|gb|ADWS01000017.1| GENE 12 12718 - 13197 678 159 aa, chain + ## HITS:1 COG:folA KEGG:ns NR:ns ## COG: folA COG0262 # Protein_GI_number: 16128042 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Escherichia coli K12 # 1 159 1 159 159 332 100.0 1e-91 MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNI ILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVE GDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR >gi|299857047|gb|ADWS01000017.1| GENE 13 13496 - 13765 207 89 aa, chain - ## HITS:1 COG:no KEGG:ECO111_0051 NR:ns ## KEGG: ECO111_0051 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 89 67 155 155 152 100.0 5e-36 MAEDVWITESKTTQLIDIWQQLKQLYPPETIPYAQKLPTKELLELLLSSPDDLRIIEIPD IIGDVFDDQTWIRLFKKHFADVIQLRCDV >gi|299857047|gb|ADWS01000017.1| GENE 14 13999 - 14598 427 199 aa, chain - ## HITS:1 COG:no KEGG:ECO111_0052 NR:ns ## KEGG: ECO111_0052 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 199 1 199 199 411 100.0 1e-114 MADYFEIRADYNQHTITIYQAYNDAIADVAVRDGRFGAPFSFNRMTWIKPSFMWMMERSN WGLKKDQQHILAIRIKRTFFDTLLEQAVLTTPEAHVYPHAGIWETLFAQANVYVQWDPER SINGKKLEHRSLQLGISRNLISQFNEDAIVAIDDLTPLVRKCHNLLINGKTTQAKSFLPP EKIYPVSAAARKALGMKNS >gi|299857047|gb|ADWS01000017.1| GENE 15 14623 - 15471 785 282 aa, chain - ## HITS:1 COG:ECs0054 KEGG:ns NR:ns ## COG: ECs0054 COG0639 # Protein_GI_number: 15829308 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Escherichia coli O157:H7 # 1 282 1 282 282 592 100.0 1e-169 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVR LVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAH AGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAF TRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGI YALDTGCCWGGSLTCLRWEDKQYFVQPSNRHKDLGEGEAVAS >gi|299857047|gb|ADWS01000017.1| GENE 16 15478 - 15855 319 125 aa, chain - ## HITS:1 COG:ECs0055 KEGG:ns NR:ns ## COG: ECs0055 COG2967 # Protein_GI_number: 15829309 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein affecting Mg2+/Co2+ transport # Organism: Escherichia coli O157:H7 # 1 125 1 125 125 241 100.0 2e-64 MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRET EVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAV PTLIH >gi|299857047|gb|ADWS01000017.1| GENE 17 15858 - 16679 699 273 aa, chain - ## HITS:1 COG:ksgA KEGG:ns NR:ns ## COG: ksgA COG0030 # Protein_GI_number: 16128045 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Escherichia coli K12 # 1 273 1 273 273 538 100.0 1e-153 MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLD QLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNIST PLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSA FTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTG MGIDPAMRAENISVAQYCQMANYLAENAPLQES >gi|299857047|gb|ADWS01000017.1| GENE 18 16676 - 17665 461 329 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 7 324 9 326 346 182 34 7e-45 MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRPYS PNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLARACDGCLNGEFAALITGP VHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPAL LHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKL NGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTA LELAGRGEADVGSFITALNLAIKMIVNTQ >gi|299857047|gb|ADWS01000017.1| GENE 19 17665 - 18951 1370 428 aa, chain - ## HITS:1 COG:ECs0058 KEGG:ns NR:ns ## COG: ECs0058 COG0760 # Protein_GI_number: 15829312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 773 100.0 0 MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQL PDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAY DGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHIL IPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELP GIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTD EQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRL NKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRAS AYVKILSN >gi|299857047|gb|ADWS01000017.1| GENE 20 19004 - 21358 2101 784 aa, chain - ## HITS:1 COG:imp KEGG:ns NR:ns ## COG: imp COG1452 # Protein_GI_number: 16128048 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Escherichia coli K12 # 1 784 1 784 784 1554 100.0 0 MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAK GDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILK GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTW SVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYED EHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFS VGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNT RDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNR VMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGL FRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWEND DKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYAS PEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQ YSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPY QNTL >gi|299857047|gb|ADWS01000017.1| GENE 21 21613 - 22428 859 271 aa, chain + ## HITS:1 COG:STM0094 KEGG:ns NR:ns ## COG: STM0094 COG1076 # Protein_GI_number: 16763484 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Salmonella typhimurium LT2 # 1 271 1 270 270 504 95.0 1e-143 MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFE VMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRS VCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQ FGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAK GLPPEMMEMAKQKAQEIQQAYELIKQQKGFK >gi|299857047|gb|ADWS01000017.1| GENE 22 22545 - 23204 218 219 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 16 218 83 281 285 88 31 1e-16 MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESV HRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWP NRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRF YASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF >gi|299857047|gb|ADWS01000017.1| GENE 23 23216 - 26122 3622 968 aa, chain - ## HITS:1 COG:ECs0063 KEGG:ns NR:ns ## COG: ECs0063 COG0553 # Protein_GI_number: 15829317 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Escherichia coli O157:H7 # 1 968 1 968 968 1915 100.0 0 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL RLIVVTHQ >gi|299857047|gb|ADWS01000017.1| GENE 24 26287 - 28638 1872 783 aa, chain - ## HITS:1 COG:polB KEGG:ns NR:ns ## COG: polB COG0417 # Protein_GI_number: 16128054 # Func_class: L Replication, recombination and repair # Function: DNA polymerase elongation subunit (family B) # Organism: Escherichia coli K12 # 1 783 1 783 783 1631 99.0 0 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM LGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERY RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIETQGYD VIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCR FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE PYQEYVRQTIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL GLF >gi|299857047|gb|ADWS01000017.1| GENE 25 28713 - 29408 696 231 aa, chain - ## HITS:1 COG:araD KEGG:ns NR:ns ## COG: araD COG0235 # Protein_GI_number: 16128055 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 231 1 231 231 474 100.0 1e-134 MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVS IETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHAD YFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNA EDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ >gi|299857047|gb|ADWS01000017.1| GENE 26 29577 - 31079 1584 500 aa, chain - ## HITS:1 COG:araA KEGG:ns NR:ns ## COG: araA COG2160 # Protein_GI_number: 16128056 # Func_class: G Carbohydrate transport and metabolism # Function: L-arabinose isomerase # Organism: Escherichia coli K12 # 1 500 1 500 500 1058 99.0 0 MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEI TAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDF MNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCR FGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMT PATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQG YGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAV EEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLP KLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDT RLPAFKDALRWNEVYYGFRR >gi|299857047|gb|ADWS01000017.1| GENE 27 31090 - 32790 1665 566 aa, chain - ## HITS:1 COG:ECs0067 KEGG:ns NR:ns ## COG: ECs0067 COG1069 # Protein_GI_number: 15829321 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Escherichia coli O157:H7 # 1 566 1 566 566 1099 98.0 0 MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIES MEAALKTVLAELSVEQRAAVVGIGVDTTGSTPAPIDADGNVLALRPEFAENPNAMFVLWK DHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDTAVAQSAASWIEL CDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFT DTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDI LIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQH PELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLA TDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPL QIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQ QWAMSAEQHYLPTSAPAQAAQAVATL >gi|299857047|gb|ADWS01000017.1| GENE 28 33078 - 34007 676 309 aa, chain + ## HITS:1 COG:ECs0068 KEGG:ns NR:ns ## COG: ECs0068 COG2207 # Protein_GI_number: 15829322 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 18 309 1 292 292 622 100.0 1e-178 MQYGQLVSSLNGGSMKSMAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMK GYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAY WHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRR MEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISV LSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEK VNDVAVKLS >gi|299857047|gb|ADWS01000017.1| GENE 29 34093 - 34857 852 254 aa, chain + ## HITS:1 COG:ECs0069 KEGG:ns NR:ns ## COG: ECs0069 COG0586 # Protein_GI_number: 15829323 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli O157:H7 # 1 253 1 253 254 445 99.0 1e-125 MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAW LAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVG PTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWL LLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPL MPVYIDILRKVVGG >gi|299857047|gb|ADWS01000017.1| GENE 30 34971 - 35669 283 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 20 217 22 226 245 113 35 3e-24 MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDS VDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGID NLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQK MTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTNELLSGKASASALLGITG >gi|299857047|gb|ADWS01000017.1| GENE 31 35653 - 37263 1640 536 aa, chain - ## HITS:1 COG:thiP KEGG:ns NR:ns ## COG: thiP COG1178 # Protein_GI_number: 16128061 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Escherichia coli K12 # 1 536 1 536 536 886 98.0 0 MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAIWQDSYLCHVVRFSF WQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGW LASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRG WHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDP ARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALL LLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELR ARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYA LKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVV ALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD >gi|299857047|gb|ADWS01000017.1| GENE 32 37239 - 38222 1045 327 aa, chain - ## HITS:1 COG:tbpA KEGG:ns NR:ns ## COG: tbpA COG4143 # Protein_GI_number: 16128062 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type thiamine transport system, periplasmic component # Organism: Escherichia coli K12 # 13 327 13 327 327 618 99.0 1e-177 MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAANWGPGPVVKKAFEADCNCELKLVALEDG VSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPF DYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAP QAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGH YLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPA TTLEFTPAEVAAQRQAWISEWQRAVSR >gi|299857047|gb|ADWS01000017.1| GENE 33 38386 - 40041 1407 551 aa, chain - ## HITS:1 COG:ECs0074 KEGG:ns NR:ns ## COG: ECs0074 COG4533 # Protein_GI_number: 15829328 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 551 1 551 552 1110 99.0 0 MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVG RGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRH ILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHW RFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLP LLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNTTNQLKIQAFDDFFGYRALIDEVN VWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVL SPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAG IMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHC IPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFD FKSAWFAPPDP >gi|299857047|gb|ADWS01000017.1| GENE 34 40130 - 40261 153 43 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_0070 NR:ns ## KEGG: ECIAI1_0070 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 43 57 99 99 84 97.0 1e-15 MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES >gi|299857047|gb|ADWS01000017.1| GENE 35 40381 - 41541 859 386 aa, chain + ## HITS:1 COG:setA KEGG:ns NR:ns ## COG: setA COG0477 # Protein_GI_number: 16128064 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 386 7 392 392 656 99.0 0 MARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWIGLFYTVNAIAGIGVS LWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRHYLTLITCGVLLASLANTAMPQLFA LAREYADNSAREVVMFSSVMRAQLSLAWVIGPPLAFMLALNYGFTVMFSIAAGIFTLSLV LIAFMLPSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSEL GLPDKLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFHSRMA LMTLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSW GHFAVYWVIAVISVVALFLTAKVKDV >gi|299857047|gb|ADWS01000017.1| GENE 36 41590 - 42195 858 201 aa, chain - ## HITS:1 COG:leuD KEGG:ns NR:ns ## COG: leuD COG0066 # Protein_GI_number: 16128065 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Escherichia coli K12 # 1 201 1 201 201 413 100.0 1e-115 MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPD FVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLL PVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIG LTLQHDDAIAAYEAKQPAFMN >gi|299857047|gb|ADWS01000017.1| GENE 37 42206 - 43606 1624 466 aa, chain - ## HITS:1 COG:leuC KEGG:ns NR:ns ## COG: leuC COG0065 # Protein_GI_number: 16128066 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Escherichia coli K12 # 1 466 1 466 466 927 100.0 0 MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGLRAHGRPVRQPGKTFAT MDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNHPYQGIVHVMGPEQGVTLP GMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIEVQGKAAPGITA KDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMTLCNMAIEMGAKAGLVAPDETTF NYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTVVTLQAEEISPQVTWGTNPGQVISV NDNIPDPASFADPVERASAEKALAYMGLKPGIPLTEVAIDKVFIGSCTNSRIEDLRAAAE IAKGRKVAPGVQALVVPGSGPVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLNP GERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVTGHFADIRNIK >gi|299857047|gb|ADWS01000017.1| GENE 38 43609 - 44700 1248 363 aa, chain - ## HITS:1 COG:leuB KEGG:ns NR:ns ## COG: leuB COG0473 # Protein_GI_number: 16128067 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Escherichia coli K12 # 1 363 2 364 364 739 99.0 0 MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPA TVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHLKLFSNLRPAKLYQGLEAF CPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAFDTEVYHRFEIERIARIAF ESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQF DVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIA QILSLALLLRYSLDADDAACAIERAINRALEEGIRTGDLARGAAAVSTDEMGDIIARYVA EGV >gi|299857047|gb|ADWS01000017.1| GENE 39 44700 - 45332 810 210 aa, chain - ## HITS:1 COG:ECs0078 KEGG:ns NR:ns ## COG: ECs0078 COG0119 # Protein_GI_number: 15829332 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Escherichia coli O157:H7 # 1 210 314 523 523 409 99.0 1e-114 MTPESIGLNQIQLNLTSRSGRAAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDY DLEALAFIGKQQEEPEHFRLDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVY QAINRITDYNVELVKYSLTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMV HVLNNIWRAAEVEKELQRKAQHNENNKETV >gi|299857047|gb|ADWS01000017.1| GENE 40 45244 - 46272 907 342 aa, chain - ## HITS:1 COG:ECs0078 KEGG:ns NR:ns ## COG: ECs0078 COG0119 # Protein_GI_number: 15829332 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Escherichia coli O157:H7 # 1 306 1 306 523 600 100.0 1e-171 MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVMEVGFPVSSPGDFESVQT IARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIATSPMHIATKLRSTLDEVIE RAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAINAGATTINIPDTVGYTMPFEF AGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAVHAGARQVEGAMNGIGERAGNCS LEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQICNMPIPANKAIVGSGAFAHSSGIH QDGVLKKPRKLRNHDTRIYWSEPNPAESDLSFGACGGETSHG >gi|299857047|gb|ADWS01000017.1| GENE 41 47093 - 48055 810 320 aa, chain + ## HITS:1 COG:leuO KEGG:ns NR:ns ## COG: leuO COG0583 # Protein_GI_number: 16128070 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 320 54 373 373 628 99.0 1e-180 MTVELSMPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVS NAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPGSGFEPASSERVF HLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRP EFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQA SIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKQNSRTCYLSWHEA AGRDKGHQWMEEQLVSICKR >gi|299857047|gb|ADWS01000017.1| GENE 42 48373 - 50097 1441 574 aa, chain + ## HITS:1 COG:ilvI KEGG:ns NR:ns ## COG: ilvI COG0028 # Protein_GI_number: 16132273 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli K12 # 1 574 1 574 574 1167 99.0 0 MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADG LARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVG ISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVDLPKDILNPANKLPYVWPESV SMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLPVVSS LMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATV LHIDIDPTSISKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRAR QCLKYDTHSEKIKPQAVIETLWRLTKGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGL GTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYLGM VKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNNRL VFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT >gi|299857047|gb|ADWS01000017.1| GENE 43 50100 - 50591 513 163 aa, chain + ## HITS:1 COG:ECs0082 KEGG:ns NR:ns ## COG: ECs0082 COG0440 # Protein_GI_number: 15829336 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 163 1 163 163 281 99.0 3e-76 MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQI EKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLY TVQLAGTSDKLDAFLASIRDVAKIVEVARSGVVGLSRGDKIMR >gi|299857047|gb|ADWS01000017.1| GENE 44 50771 - 51775 1079 334 aa, chain + ## HITS:1 COG:ECs0084 KEGG:ns NR:ns ## COG: ECs0084 COG1609 # Protein_GI_number: 15829338 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 655 100.0 0 MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGR TRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDA IIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAE TVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYANSYEREAAAQLFEKWLETHPMPQ ALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDVAERV LEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS >gi|299857047|gb|ADWS01000017.1| GENE 45 52377 - 52835 266 152 aa, chain + ## HITS:1 COG:ECs0085 KEGG:ns NR:ns ## COG: ECs0085 COG2001 # Protein_GI_number: 15829339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 296 100.0 7e-81 MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPCLLLYPLPEWEIIEQKL SRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHAGLTKEVMLVGQFNKFELW DETTWHQQVKEDIDAEQLATGDLSERLQDLSL >gi|299857047|gb|ADWS01000017.1| GENE 46 52840 - 53778 1099 312 aa, chain + ## HITS:1 COG:ECs0086 KEGG:ns NR:ns ## COG: ECs0086 COG0275 # Protein_GI_number: 15829340 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Escherichia coli O157:H7 # 1 312 2 313 313 593 100.0 1e-169 MENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAI AVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRD GPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTK ELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISF HSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKLGGRQLRALGKLMPGEEEVAENPRAR SSVLRIAERTNA >gi|299857047|gb|ADWS01000017.1| GENE 47 53775 - 54140 311 121 aa, chain + ## HITS:1 COG:ECs0087 KEGG:ns NR:ns ## COG: ECs0087 COG3116 # Protein_GI_number: 15829341 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 # 1 121 1 121 121 224 100.0 4e-59 MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFICIILTAVTVVTTAHHT RLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIATEKLQMQHVDPSQENIVVQ K >gi|299857047|gb|ADWS01000017.1| GENE 48 54156 - 55922 1645 588 aa, chain + ## HITS:1 COG:ECs0088 KEGG:ns NR:ns ## COG: ECs0088 COG0768 # Protein_GI_number: 15829342 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1162 100.0 0 MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAWLQVISPDMLVKEGDMR SLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAGGISVGDRWKALANALNIP LDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHLREESRRYYPSGEVTAHLIG FTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERL QALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPKEAMRNRTIT DVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPYRINGHEIKDVARYSELTLTGVLQKSS NVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWSDIERATFSFGYG LMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGG GVKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKY YGGAVSAPVFGAIMGGVLRTMNIEPDALTTGDKNEFVINQGEGTGGRS >gi|299857047|gb|ADWS01000017.1| GENE 49 55909 - 57396 1486 495 aa, chain + ## HITS:1 COG:murE KEGG:ns NR:ns ## COG: murE COG0769 # Protein_GI_number: 16128078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Escherichia coli K12 # 1 495 1 495 495 930 98.0 0 MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGV AAIIAEAKGEATDGEIREMHGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGK TTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVEQGATFC AMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQAIIN ADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKAIDVNYHDSGATIRFSSSWGDGEIE SHLMGAFNVSNLLLALATLLALGYPLADLLKTAARLQPVCGRMEVFTAPGKPTVVVDYAH TPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEE PRAIINDILAGMLDAGHAKVMEGRAEAVTCAVMQAKENDVVLVAGKGHEDYQIVGNQRLD YSDRVTVARLLGVIA >gi|299857047|gb|ADWS01000017.1| GENE 50 57393 - 58751 1315 452 aa, chain + ## HITS:1 COG:murF KEGG:ns NR:ns ## COG: murF COG0770 # Protein_GI_number: 16128079 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Escherichia coli K12 # 1 452 1 452 452 814 99.0 0 MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALKGERFDAHDFADQAKAG GAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAA ILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAAL VNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNADNNDWLNWQSVIGSRKVWRFS PNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMSVGATL DAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLVVGD MAELGAESEACHVQVGEAAKAAGIDRVLSVGKQSHAISTASGVGEHFADKTALITRLKSL IAEQQVITILVKGSRSAAMEEVVRALQENGTC >gi|299857047|gb|ADWS01000017.1| GENE 51 58745 - 59827 1356 360 aa, chain + ## HITS:1 COG:STM0125 KEGG:ns NR:ns ## COG: STM0125 COG0472 # Protein_GI_number: 16763515 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Salmonella typhimurium LT2 # 1 360 1 360 360 642 97.0 0 MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIAHLQKLSFGQVVRND GPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVLVVLVGYGVIGFVDDYRKV VRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQLVVPFFKDVMPQLGLFYILLA YFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWATGNMNFASYLHIPYLRHAGELV IVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVE TLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR >gi|299857047|gb|ADWS01000017.1| GENE 52 59830 - 61146 1331 438 aa, chain + ## HITS:1 COG:murD KEGG:ns NR:ns ## COG: murD COG0771 # Protein_GI_number: 16128081 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Escherichia coli K12 # 1 438 1 438 438 845 99.0 0 MADYQGKNVVIIGLGLTGLSCVDFFLARGLTPRVMDTRMTPPGLDKLPEAVERHTGSLND EWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT TLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELSSFQLETTSSLQAVAATILNV TEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHL NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGL PHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLQVDGTLHLLLGGDGKSADFSPLARYL NGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQF KNFEQRGNEFARLAKELG >gi|299857047|gb|ADWS01000017.1| GENE 53 61146 - 62390 1478 414 aa, chain + ## HITS:1 COG:ECs0093 KEGG:ns NR:ns ## COG: ECs0093 COG0772 # Protein_GI_number: 15829347 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Escherichia coli O157:H7 # 1 414 1 414 414 735 100.0 0 MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMYDRTLLWLTFGLAAIGF IMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRLPMEFWQRYSATMLLGSII LLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYIANYLVRKGDEVRNNLRGFLK PMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAKLWQFIAIIGMGISAVVLLILAE PYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGELWGQGLGNSVQKLEYLPEAHTDFIF AIIGEELGYVGVVLALLMVFFVAFRAMSIGRKALEIDHRFSGFLACSIGIWFSFQALVNV GAAAGMLPTKGLTLPLISYGGSSLLIMSTAIMMLLRIDYETRLEKAQAFVRGSR >gi|299857047|gb|ADWS01000017.1| GENE 54 62387 - 63454 946 355 aa, chain + ## HITS:1 COG:murG KEGG:ns NR:ns ## COG: murG COG0707 # Protein_GI_number: 16128083 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Escherichia coli K12 # 1 355 1 355 355 652 99.0 0 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFI RISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIP VVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGNPVRTDVLALPLPQQRLAGRE GPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKV TEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGA AKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRAARA >gi|299857047|gb|ADWS01000017.1| GENE 55 63508 - 64983 1506 491 aa, chain + ## HITS:1 COG:ECs0095 KEGG:ns NR:ns ## COG: ECs0095 COG0773 # Protein_GI_number: 15829349 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Escherichia coli O157:H7 # 1 491 1 491 491 906 99.0 0 MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQL MNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRH GIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDA SFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELL PRVGRQTTTYGFNEDADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAA VAVATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVD ATIKAARAGWPDKNLVMLFQPHRFTRTRDLYDDFANVLTQVDTLLMLEVYPAGEAPIPGA DSRSLCRTIRGRGKIDPILVPDPAQVAEMLAPVLTGNDLILVQGAGNIGKIARSLAEIKL KPQTPEEEQHD >gi|299857047|gb|ADWS01000017.1| GENE 56 64976 - 65896 1069 306 aa, chain + ## HITS:1 COG:ddlB KEGG:ns NR:ns ## COG: ddlB COG1181 # Protein_GI_number: 16128085 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli K12 # 1 306 1 306 306 580 99.0 1e-165 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFI ALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRA EFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIE KWLSGPEFTVAILGEEILPSIRIQPAGTFYDYEAKYLSDETQYFCPAGLEASQEANLQAL VLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR ILELAD >gi|299857047|gb|ADWS01000017.1| GENE 57 65898 - 66728 618 276 aa, chain + ## HITS:1 COG:ECs0097 KEGG:ns NR:ns ## COG: ECs0097 COG1589 # Protein_GI_number: 15829351 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Escherichia coli O157:H7 # 1 265 1 265 276 491 100.0 1e-139 MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWVVLGWMEDAQRLPLSKL VLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQRLPWIKQVSVRKQWPDELK IHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPMLYGPEGSANEVLQGYREMGQM LAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMKRLARFVELYPVLQQQAQTDGKR ISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ >gi|299857047|gb|ADWS01000017.1| GENE 58 66725 - 67987 1176 420 aa, chain + ## HITS:1 COG:ECs0098 KEGG:ns NR:ns ## COG: ECs0098 COG0849 # Protein_GI_number: 15829352 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Escherichia coli O157:H7 # 1 420 1 420 420 818 100.0 0 MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSRGMDKGGVNDLESVVKC VQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEEEVTQEDVENVVHTAKSVR VRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHLITCHNDMAKNIVKAVERCGL KVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDIAVYTGGALRHTKVIPYAGNVVT SDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVEVPSVGGRPPRSLQRQTLAEVIEPR YTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFHTQVRIGA PLNITGLTDYAQEPYYSTAVGLLHYGKESHLNGEAEVEKRVTASVGSWIKRLNSWLRKEF >gi|299857047|gb|ADWS01000017.1| GENE 59 68048 - 69199 1339 383 aa, chain + ## HITS:1 COG:ECs0099 KEGG:ns NR:ns ## COG: ECs0099 COG0206 # Protein_GI_number: 15829353 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Escherichia coli O157:H7 # 1 383 1 383 383 642 100.0 0 MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNTDAQALRKTAVGQTIQI GSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAAGMGGGTGTGAAPVVAEVA KDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSLITIPNDKLLKVLGRGISLLD AFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGSGVASGEDRAEEAA EMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFASDNATVVIGTSLDP DMNDELRVTVVATGIGMDKRPEITLVTNKQVQQPVMDRYQQHGMAPLTQEQKPVAKVVND NAPQTAKEPDYLDIPAFLRKQAD >gi|299857047|gb|ADWS01000017.1| GENE 60 69300 - 70217 819 305 aa, chain + ## HITS:1 COG:ECs0100 KEGG:ns NR:ns ## COG: ECs0100 COG0774 # Protein_GI_number: 15829354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 636 100.0 0 MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIPIMDGSAAPFVYLLLDAGI DELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTIDFNHPAIDSSNQRYAMNFSAD AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDDAELPLAFKAP SAVLA >gi|299857047|gb|ADWS01000017.1| GENE 61 70372 - 70959 285 195 aa, chain + ## HITS:1 COG:no KEGG:G2583_0101 NR:ns ## KEGG: G2583_0101 # Name: secM # Def: secretion monitor protein # Organism: E.coli_O55_H7 # Pathway: Protein export [PATH:eok03060]; Bacterial secretion system [PATH:eok03070] # 1 195 33 227 227 384 98.0 1e-106 MLWTAGFNDKICALNTFEYDRDGNNVSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALS NAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSF AMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVW ISQAQGIRAGPQRLT >gi|299857047|gb|ADWS01000017.1| GENE 62 71021 - 73726 3477 901 aa, chain + ## HITS:1 COG:secA KEGG:ns NR:ns ## COG: secA COG0653 # Protein_GI_number: 16128091 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Escherichia coli K12 # 1 901 1 901 901 1719 99.0 0 MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKGEVL ENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNA LTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNN EYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVN KIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYS PANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK EGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIR KDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLN AKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEVAALENPTVEQIEKIKAD WQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFAS DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY SQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPI AEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLA AMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEEL EQQRRMEAERLAQMQQLSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRL Q >gi|299857047|gb|ADWS01000017.1| GENE 63 73786 - 74175 337 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Haemophilus influenzae R2866] # 2 126 4 128 136 134 48 2e-30 MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGI TPQHFSLFEKLEYEFPDRHITLWFWLVESWEGEPWGKEGQPGEWMSLVGLNADDFPPANE PVIAKLKRL >gi|299857047|gb|ADWS01000017.1| GENE 64 74275 - 74472 100 65 aa, chain - ## HITS:1 COG:ECs0105 KEGG:ns NR:ns ## COG: ECs0105 COG3024 # Protein_GI_number: 15829359 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 65 1 65 65 117 100.0 7e-27 MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEEKRIPSSGDLSESDDWS EEPKQ >gi|299857047|gb|ADWS01000017.1| GENE 65 74482 - 75225 744 247 aa, chain - ## HITS:1 COG:yacF KEGG:ns NR:ns ## COG: yacF COG4582 # Protein_GI_number: 16128095 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 247 1 247 247 484 100.0 1e-137 MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFFRNVSELLDVFERGEVR TELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIAL VRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAP FRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDTENGQVPERL DFELACC >gi|299857047|gb|ADWS01000017.1| GENE 66 75225 - 75845 625 206 aa, chain - ## HITS:1 COG:ECs0107 KEGG:ns NR:ns ## COG: ECs0107 COG0237 # Protein_GI_number: 15829361 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 360 100.0 1e-100 MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGAPALHAIADHFGANMIA ADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVENSL YKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQATREARLAVADDVIDNNGAPD AIASDVARLHAHYLQLASQFVSQEKP >gi|299857047|gb|ADWS01000017.1| GENE 67 76070 - 77113 989 347 aa, chain + ## HITS:1 COG:guaC KEGG:ns NR:ns ## COG: guaC COG0516 # Protein_GI_number: 16128097 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Escherichia coli K12 # 1 347 1 347 347 697 100.0 0 MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSWSGVPIIAANMDTVGTF SMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVSTGTSDADFEKTKQILDLN PALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVVTGEMCEELILSGADIVKVGI GPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGADFVM LGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMKRHVGGVAEYRAAEGKTVKLPLRGP VENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRIFNNL >gi|299857047|gb|ADWS01000017.1| GENE 68 77148 - 78350 845 400 aa, chain - ## HITS:1 COG:ECs0110 KEGG:ns NR:ns ## COG: ECs0110 COG1459 # Protein_GI_number: 15829364 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 712 98.0 0 MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLSLKRIAINSAQWRGDKS AEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAHDLEQGIAFSNALLPWSEV FPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTEKVKSALRYPIIILAMAIMVVVAM LHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWGWLLVLFGFLLAIANKLLMRRPTW LIARQKLLLRIPIMGSLMRGQKLTQIFTILALTQSAGITFLQGVESVRETMRCPYWVQLL TQIQHDISNGHPIWLALKNAGEFSPLCLQLVRTGEASGSLDLMLDNLAHHHRDNTMALAD NLAALLEPALLIITGGIIGTLVVAMYLPIFHLGDAMSGMG >gi|299857047|gb|ADWS01000017.1| GENE 69 78340 - 79725 860 461 aa, chain - ## HITS:1 COG:hofB KEGG:ns NR:ns ## COG: hofB COG2804 # Protein_GI_number: 16128100 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Escherichia coli K12 # 1 461 1 461 461 884 98.0 0 MNIPQLTALCLRYQGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQME GHASRTQQTLPVAVQEKHQPKAELLARTLQSALEQRASDIHIEPADNAYRIRLRIDGVLH PLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKV VLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQTLN TADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAE IAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRR QQGEPIHIPVNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVES LETHARQAGMCTLFENGCLAVEQGLTTFEELIRVLGMPHGE >gi|299857047|gb|ADWS01000017.1| GENE 70 79735 - 80175 487 146 aa, chain - ## HITS:1 COG:ppdD KEGG:ns NR:ns ## COG: ppdD COG4969 # Protein_GI_number: 16128101 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Escherichia coli K12 # 1 146 1 146 146 292 99.0 2e-79 MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEH GGLDTCDGGSNGIPSPTTTHYVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGW TRNCNIQSDSALQQACEDVFRFDDAN >gi|299857047|gb|ADWS01000017.1| GENE 71 80378 - 81271 460 297 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 27 295 15 283 286 181 37 1e-44 MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATV ITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERT ALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAVLCGGGANHRLGLS DAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALKAGADIIMLDNFET EQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVDFISVGALTKHVQALDLSMRFR >gi|299857047|gb|ADWS01000017.1| GENE 72 81359 - 81910 501 183 aa, chain + ## HITS:1 COG:ampD KEGG:ns NR:ns ## COG: ampD COG3023 # Protein_GI_number: 16128103 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Escherichia coli K12 # 1 183 1 183 183 384 100.0 1e-107 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK ETT >gi|299857047|gb|ADWS01000017.1| GENE 73 81907 - 82761 807 284 aa, chain + ## HITS:1 COG:ampE KEGG:ns NR:ns ## COG: ampE COG3725 # Protein_GI_number: 16128104 # Func_class: V Defense mechanisms # Function: Membrane protein required for beta-lactamase induction # Organism: Escherichia coli K12 # 1 284 1 284 284 514 99.0 1e-146 MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLGMTIIAMGVTFLLLRA LQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVP AGCDEREYLRELQNALLWINFRFYLAALFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQT PHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLA QFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV >gi|299857047|gb|ADWS01000017.1| GENE 74 82804 - 84174 1461 456 aa, chain - ## HITS:1 COG:aroP KEGG:ns NR:ns ## COG: aroP COG1113 # Protein_GI_number: 16128105 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 456 2 457 457 826 100.0 0 MEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFL IMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFW YPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGG PQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV IYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYN SCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGL LMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVIML MTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH >gi|299857047|gb|ADWS01000017.1| GENE 75 84718 - 85482 681 254 aa, chain + ## HITS:1 COG:ECs0117 KEGG:ns NR:ns ## COG: ECs0117 COG2186 # Protein_GI_number: 15829371 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 402 100.0 1e-112 MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEA KGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAAYYAALRST DEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQN VRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSREES RRERSLRRLEQRKN >gi|299857047|gb|ADWS01000017.1| GENE 76 85643 - 88306 3421 887 aa, chain + ## HITS:1 COG:ECs0118 KEGG:ns NR:ns ## COG: ECs0118 COG2609 # Protein_GI_number: 15829372 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Escherichia coli O157:H7 # 1 887 1 887 887 1837 100.0 0 MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEARKGGVNVAAGTGISNY INTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDV CFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGLSSYPH PKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESK GAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWD ELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWAL NRGGHDPKKIYAAFKKAQETKGKATVILAHTIKGYGMGDAAEGKNIAHQVKKMNMDGVRH IRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQRQKLHGYLPSRQPNFTEKLELPSLQ DFGALLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYS PNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGCSWLAAATSYSTNNLPMIPFYIYY SMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYD PAYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETI EGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHP LETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRH HFEVDASYVVVAALGELAKRGEIDKKVVADAIAKFNIDADKVNPRLA >gi|299857047|gb|ADWS01000017.1| GENE 77 88321 - 90213 2196 630 aa, chain + ## HITS:1 COG:ECs0119 KEGG:ns NR:ns ## COG: ECs0119 COG0508 # Protein_GI_number: 15829373 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Escherichia coli O157:H7 # 1 630 1 630 630 945 99.0 0 MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVS VGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAAAAAKDVNVPDIGSDEVEV TEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVSTGSLIMVFEVA GEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDEVEVTEVMVKVGDKVAAEQSLIT VEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEGAAPAAAPAKQEAAAPAPA AKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIRRLAREFGVNLAKVKGTGRKGRILRED VQAYVKEAIKRAEAAPAATGGGIPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLSRNW VMIPHVTHFDKTDITELEAFRKQQNEEAAKRKLDVKITPVVFIMKAVAAALEQMPRFNSS LSEDGQRLTLKKYINIGVAVDTPNGLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTA GEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFVPRLMLPISLS FDHRVIDGADGARFITIINNTLSDIRRLVM >gi|299857047|gb|ADWS01000017.1| GENE 78 90538 - 91962 682 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 452 3 444 458 267 33 2e-70 MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVA KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT GANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLV MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTA VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQ LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGE LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK >gi|299857047|gb|ADWS01000017.1| GENE 79 92033 - 93790 644 585 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0110 NR:ns ## KEGG: EC55989_0110 # Name: yacH # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 585 1 585 585 967 99.0 0 MKMTLPFKPHVLALICSAGLCAASTGLYIKSRTVEAPVEPQSTQQTAPDITAVTLPATVS APPVTPAVVKSAFSTAQIDQWVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQ GDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQRLRQ LAQQTGSLKSSTEQKVITTTKKAVPVTQTVTAPAIPSNTVSTASPIITEPATTVISIEPA NPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEPFIDSFVRGFGYSMGVATTYALFSS IDWDDDDHDHHHHDDDDYHHHDGGHRDGNGWQHNGDNINIDVNNFNRITGEHLTDKNMAW RHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAASQFQQRTHAAPV ITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRE KMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQRPLNQQQRDNARQRIQSASPEQRQ VFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSERGARRQER >gi|299857047|gb|ADWS01000017.1| GENE 80 94145 - 96742 3095 865 aa, chain + ## HITS:1 COG:acnB KEGG:ns NR:ns ## COG: acnB COG1049 # Protein_GI_number: 16128111 # Func_class: C Energy production and conversion # Function: Aconitase B # Organism: Escherichia coli K12 # 1 865 1 865 865 1705 100.0 0 MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEFLLDLLTNRVPPGVDEA AYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPLIDALDDAKLAPIAAKALS HTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRPALAEKLTVTVFKVTGETNTD DLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVGPIKQIEALQQKGFPLAYVGDVV GTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGGKIAPIFFNTMEDAGALPIEVDVSN LNMGDVIDVYPYKGEVRNHETGELLATFELKTDVLIDEVRAGGRIPLIIGRGLTTKAREA LGLPHSDVFRQAKDVAESDRGFSLAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPM TRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVNTHHTLPDFIMNRGGVSLRPGDGVIH SWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKM QPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAFELTDASA ERSAAGCTIKLNKEPIIEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEA DADAEYAAVIDIDLADIKEPILCAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAA GKLLDAHKGQLPTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVA DGATVVSTSTRNFPNRLGTGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDT YRYLNFNQLSQYTEKADGVIFQTAV >gi|299857047|gb|ADWS01000017.1| GENE 81 96917 - 97279 467 120 aa, chain + ## HITS:1 COG:ECs0123 KEGG:ns NR:ns ## COG: ECs0123 COG3112 # Protein_GI_number: 15829377 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 120 17 136 136 217 100.0 3e-57 MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAG HEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK >gi|299857047|gb|ADWS01000017.1| GENE 82 97317 - 98111 777 264 aa, chain - ## HITS:1 COG:ECs0124 KEGG:ns NR:ns ## COG: ECs0124 COG1586 # Protein_GI_number: 15829378 # Func_class: E Amino acid transport and metabolism # Function: S-adenosylmethionine decarboxylase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 537 100.0 1e-153 MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIG ANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYP ESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGMKHF IDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTDSE RQEITAALWKEMREIYYGRNMPAV >gi|299857047|gb|ADWS01000017.1| GENE 83 98127 - 98993 847 288 aa, chain - ## HITS:1 COG:speE KEGG:ns NR:ns ## COG: speE COG0421 # Protein_GI_number: 16128114 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Escherichia coli K12 # 1 288 1 288 288 602 100.0 1e-172 MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDE FIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQY LPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKR CLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDND ALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS >gi|299857047|gb|ADWS01000017.1| GENE 84 99099 - 99446 336 115 aa, chain - ## HITS:1 COG:no KEGG:ECSE_0122 NR:ns ## KEGG: ECSE_0122 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 115 42 156 156 231 100.0 8e-60 MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALV FFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK >gi|299857047|gb|ADWS01000017.1| GENE 85 99612 - 101162 1597 516 aa, chain + ## HITS:1 COG:yacK KEGG:ns NR:ns ## COG: yacK COG2132 # Protein_GI_number: 16128116 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Escherichia coli K12 # 1 516 1 516 516 1051 100.0 0 MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDARNRIQLTIGAGQSTFG GKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEVDGGPQGIIP PGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDD VPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCN ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV SQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLD MMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKP MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNVS EVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV >gi|299857047|gb|ADWS01000017.1| GENE 86 101336 - 101542 125 68 aa, chain - ## HITS:1 COG:Z5089 KEGG:ns NR:ns ## COG: Z5089 COG2801 # Protein_GI_number: 15804202 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 68 158 225 225 132 91.0 1e-31 MERFFRSLKTEWVPTNGYAGKDEARQQINDYILNYYNSVRPHHYNGGLTPEESENRYHFY CKTVANIT Prediction of potential genes in microbial genomes Time: Sun May 15 22:18:16 2011 Seq name: gi|299857046|gb|ADWS01000018.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont17.1, whole genome shotgun sequence Length of sequence - 93338 bp Number of predicted genes - 78, with homology - 77 Number of transcription units - 43, operones - 16 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 2/0.938 + CDS 46 - 225 242 ## COG5433 Transposase + Prom 231 - 290 3.4 2 2 Op 1 2/0.938 + CDS 325 - 1182 219 ## COG5433 Transposase + Prom 1199 - 1258 3.0 3 2 Op 2 . + CDS 1281 - 1508 226 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog - Term 1322 - 1348 -1.0 4 3 Tu 1 . - CDS 1512 - 2081 409 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family - Prom 2132 - 2191 2.8 + Prom 2081 - 2140 3.3 5 4 Tu 1 . + CDS 2254 - 3099 648 ## COG2162 Arylamine N-acetyltransferase 6 5 Op 1 4/0.250 - CDS 3195 - 4088 792 ## COG0384 Predicted epimerase, PhzC/PhzF homolog 7 5 Op 2 12/0.000 - CDS 4168 - 4848 487 ## COG2181 Nitrate reductase gamma subunit 8 5 Op 3 12/0.000 - CDS 4845 - 5540 871 ## COG2180 Nitrate reductase delta subunit 9 5 Op 4 13/0.000 - CDS 5540 - 7084 1474 ## COG1140 Nitrate reductase beta subunit 10 5 Op 5 10/0.000 - CDS 7081 - 10821 3695 ## COG5013 Nitrate reductase alpha subunit 11 5 Op 6 2/0.938 - CDS 10903 - 12291 982 ## COG2223 Nitrate/nitrite transporter 12 6 Op 1 2/0.938 - CDS 12615 - 13910 259 ## COG4886 Leucine-rich repeat (LRR) protein 13 6 Op 2 3/0.688 - CDS 13970 - 14260 372 ## COG3203 Outer membrane protein (porin) - Prom 14299 - 14358 5.8 14 7 Tu 1 . - CDS 14519 - 15343 671 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 15572 - 15631 4.2 + Prom 15387 - 15446 6.2 15 8 Op 1 5/0.000 + CDS 15632 - 16219 629 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 16 8 Op 2 16/0.000 + CDS 16268 - 18679 2663 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 17 8 Op 3 12/0.000 + CDS 18692 - 19576 920 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 18 8 Op 4 . + CDS 19569 - 20222 870 ## COG2864 Cytochrome b subunit of formate dehydrogenase + Term 20243 - 20284 9.0 - Term 20236 - 20267 3.4 19 9 Tu 1 . - CDS 20273 - 20557 278 ## COG3093 Plasmid maintenance system antidote protein 20 10 Tu 1 . - CDS 20703 - 21713 953 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 21774 - 21833 4.0 - Term 21805 - 21840 6.5 21 11 Tu 1 . - CDS 21847 - 23544 1899 ## COG0281 Malic enzyme - Prom 23627 - 23686 4.3 - Term 23627 - 23678 8.4 22 12 Op 1 . - CDS 23701 - 23838 230 ## PROTEIN SUPPORTED gi|15801657|ref|NP_287675.1| 30S ribosomal subunit S22 23 12 Op 2 . - CDS 23940 - 24155 298 ## B21_01451 hypothetical protein - Prom 24272 - 24331 4.8 + Prom 24229 - 24288 7.6 24 13 Tu 1 . + CDS 24500 - 24931 531 ## COG1764 Predicted redox protein, regulator of disulfide bond formation + Term 24947 - 24986 6.5 25 14 Op 1 17/0.000 - CDS 24987 - 25913 617 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 26 14 Op 2 44/0.000 - CDS 25906 - 26892 467 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 27 14 Op 3 49/0.000 - CDS 26889 - 27782 788 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 28 14 Op 4 38/0.000 - CDS 27782 - 28804 315 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 29 14 Op 5 3/0.688 - CDS 28806 - 30356 1720 ## COG0747 ABC-type dipeptide transport system, periplasmic component 30 14 Op 6 1/1.000 - CDS 30370 - 30951 426 ## COG2173 D-alanyl-D-alanine dipeptidase - Term 31170 - 31195 -0.5 31 15 Op 1 5/0.000 - CDS 31209 - 33608 2045 ## COG2202 FOG: PAS/PAC domain 32 15 Op 2 2/0.938 - CDS 33633 - 35015 1195 ## COG2199 FOG: GGDEF domain - Prom 35164 - 35223 5.6 33 16 Tu 1 . - CDS 35388 - 36542 819 ## COG1649 Uncharacterized protein conserved in bacteria - Term 36778 - 36812 5.2 34 17 Op 1 7/0.000 - CDS 36838 - 38373 1547 ## COG0531 Amino acid transporters 35 17 Op 2 . - CDS 38529 - 39929 1602 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins - Prom 40042 - 40101 6.0 + Prom 39731 - 39790 5.6 36 18 Tu 1 . + CDS 39862 - 40008 89 ## - Term 40091 - 40132 8.8 37 19 Tu 1 . - CDS 40140 - 41537 1287 ## COG1858 Cytochrome c peroxidase - Prom 41557 - 41616 4.1 + Prom 41771 - 41830 6.6 38 20 Tu 1 . + CDS 41942 - 43591 1634 ## COG1626 Neutral trehalase + Term 43595 - 43644 8.4 - Term 43583 - 43632 8.4 39 21 Tu 1 . - CDS 43642 - 44244 400 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 44302 - 44361 4.3 + Prom 44649 - 44708 1.8 40 22 Op 1 3/0.688 + CDS 44782 - 45663 705 ## COG0583 Transcriptional regulator 41 22 Op 2 4/0.250 + CDS 45712 - 46725 1056 ## COG1295 Predicted membrane protein + Term 46728 - 46776 6.5 + Prom 46929 - 46988 5.4 42 23 Tu 1 . + CDS 47136 - 48458 1621 ## COG0477 Permeases of the major facilitator superfamily - Term 48598 - 48634 4.0 43 24 Op 1 4/0.250 - CDS 48692 - 50752 1587 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis 44 24 Op 2 . - CDS 50822 - 51589 659 ## COG2200 FOG: EAL domain - Prom 51727 - 51786 2.8 + Prom 51537 - 51596 2.6 45 25 Tu 1 . + CDS 51821 - 52750 1013 ## COG0524 Sugar kinases, ribokinase family + Term 52812 - 52857 -0.4 - Term 52798 - 52845 1.7 46 26 Op 1 5/0.000 - CDS 52846 - 54300 1502 ## COG0612 Predicted Zn-dependent peptidases - Prom 54320 - 54379 4.0 - Term 54509 - 54550 6.1 47 26 Op 2 3/0.688 - CDS 54563 - 55849 1488 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 55938 - 55997 3.6 - Term 55954 - 56007 4.3 48 27 Op 1 5/0.000 - CDS 56032 - 58020 1937 ## COG2200 FOG: EAL domain 49 27 Op 2 4/0.250 - CDS 58102 - 61575 3256 ## COG0457 FOG: TPR repeat 50 27 Op 3 . - CDS 61557 - 62663 1097 ## COG3405 Endoglucanase Y 51 27 Op 4 . - CDS 62670 - 65009 2347 ## ECO103_4260 cellulose synthase regulator protein 52 27 Op 5 1/1.000 - CDS 65020 - 67638 2401 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 53 27 Op 6 . - CDS 67635 - 68387 630 ## COG1192 ATPases involved in chromosome partitioning 54 27 Op 7 . - CDS 68399 - 68587 227 ## SSON_3856 hypothetical protein - Prom 68767 - 68826 4.3 + Prom 69087 - 69146 7.2 55 28 Op 1 . + CDS 69337 - 70431 844 ## SBO_3535 putative protease 56 28 Op 2 . + CDS 70428 - 70619 211 ## ECO103_4265 hypothetical protein 57 28 Op 3 . + CDS 70616 - 72295 1240 ## ECH74115_4904 hypothetical protein + Term 72477 - 72536 0.3 - Term 72293 - 72331 7.0 58 29 Tu 1 . - CDS 72382 - 72579 101 ## ECSE_3808 hypothetical protein - Prom 72768 - 72827 2.3 + Prom 72774 - 72833 4.2 59 30 Tu 1 . + CDS 72965 - 74236 1074 ## COG0814 Amino acid permeases - Term 74226 - 74256 1.7 60 31 Op 1 44/0.000 - CDS 74266 - 75270 801 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 61 31 Op 2 44/0.000 - CDS 75267 - 76250 575 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 62 31 Op 3 49/0.000 - CDS 76261 - 77163 1277 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 63 31 Op 4 38/0.000 - CDS 77173 - 78192 355 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 - Term 78244 - 78279 -0.1 64 31 Op 5 . - CDS 78343 - 79950 2123 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 80116 - 80175 3.2 65 32 Tu 1 . - CDS 80302 - 80808 -144 ## EcSMS35_3865 hypothetical protein - TRNA 81031 - 81107 85.1 # Pro CGG 0 0 - Term 80990 - 81020 4.3 66 33 Tu 1 . - CDS 81199 - 82890 1706 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 83064 - 83123 7.4 - Term 83099 - 83129 3.0 67 34 Tu 1 . - CDS 83214 - 84422 1477 ## COG0477 Permeases of the major facilitator superfamily - Prom 84460 - 84519 3.5 68 35 Tu 1 . - CDS 84651 - 85349 478 ## COG5571 Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion - Prom 85426 - 85485 3.1 + Prom 85294 - 85353 6.5 69 36 Op 1 5/0.000 + CDS 85507 - 86070 357 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) 70 36 Op 2 . + CDS 86067 - 86507 436 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 86570 - 86605 6.1 71 37 Tu 1 . - CDS 86476 - 88809 1897 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 88927 - 88986 5.7 + Prom 88835 - 88894 2.4 72 38 Tu 1 . + CDS 88962 - 89621 213 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 + Term 89631 - 89670 7.6 + Prom 89643 - 89702 3.3 73 39 Tu 1 . + CDS 89725 - 90699 902 ## COG1052 Lactate dehydrogenase and related dehydrogenases + Term 90716 - 90757 3.0 - Term 90709 - 90739 0.2 74 40 Tu 1 . - CDS 90749 - 91459 695 ## SBO_3556 hypothetical protein - Prom 91617 - 91676 5.0 75 41 Tu 1 4/0.250 + CDS 91893 - 92183 237 ## COG2944 Predicted transcriptional regulator + Term 92210 - 92241 4.1 + Prom 92244 - 92303 5.2 76 42 Tu 1 . + CDS 92464 - 92676 301 ## COG1278 Cold shock proteins + Term 92703 - 92738 4.9 - Term 92824 - 92855 4.1 77 43 Op 1 . - CDS 92864 - 93076 151 ## ECSE_3831 small toxic polypeptide 78 43 Op 2 . - CDS 93118 - 93306 103 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|299857046|gb|ADWS01000018.1| GENE 1 46 - 225 242 59 aa, chain + ## HITS:1 COG:ybfD KEGG:ns NR:ns ## COG: ybfD COG5433 # Protein_GI_number: 16128681 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 59 1 59 253 119 98.0 1e-27 MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHPDVLK >gi|299857046|gb|ADWS01000018.1| GENE 2 325 - 1182 219 285 aa, chain + ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 285 94 378 378 556 97.0 1e-158 MRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVLGQIKTDEKSNEIT AIPELLNMMDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLK ELNNSEHDSYAMSEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQ KKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRQGNAAELF SGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGRRLS >gi|299857046|gb|ADWS01000018.1| GENE 3 1281 - 1508 226 75 aa, chain + ## HITS:1 COG:ZydcE KEGG:ns NR:ns ## COG: ZydcE COG1942 # Protein_GI_number: 15801678 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Escherichia coli O157:H7 EDL933 # 1 75 14 88 88 133 100.0 7e-32 MPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEI APQMEALIKKPGYSM >gi|299857046|gb|ADWS01000018.1| GENE 4 1512 - 2081 409 189 aa, chain - ## HITS:1 COG:yddH KEGG:ns NR:ns ## COG: yddH COG1853 # Protein_GI_number: 16129421 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli K12 # 1 189 17 205 205 383 96.0 1e-106 MSRFIPIELHHASRLLNHGPTVMITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKST WTRELIERNGKFGIVIPGVAATNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEK CLAWMECRLLPATSAQQKYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFV TSGKRVTAG >gi|299857046|gb|ADWS01000018.1| GENE 5 2254 - 3099 648 281 aa, chain + ## HITS:1 COG:nhoA KEGG:ns NR:ns ## COG: nhoA COG2162 # Protein_GI_number: 16129422 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Arylamine N-acetyltransferase # Organism: Escherichia coli K12 # 1 281 1 281 281 550 97.0 1e-157 MTPILNHYFARINWSGAAAVNIDTLRALHLKHNCTIPFENLDVLLPREIQLDDQSLEEKL VIARRGGYCFEQNGVFERVLRELEFNVRSLLGRVVLSNPLALPPRTHRLLLVELEEEKWI ADVGFGGQTLTAPIRLVSDLVQTTPHGDYRLLQEGDDWVLQFNHHQHWQSMYRFDLCKQQ QSDYVMGNFWSAHWPQSHFRHHLLMCRHLPDGGKLTLTNFHFTHYENGHAVEQRNLPDVA SLYAVMQEQFGLGVDDAKHGFTVDELALVMAAFDTHPEAGK >gi|299857046|gb|ADWS01000018.1| GENE 6 3195 - 4088 792 297 aa, chain - ## HITS:1 COG:yddE KEGG:ns NR:ns ## COG: yddE COG0384 # Protein_GI_number: 16129423 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Escherichia coli K12 # 1 297 1 297 297 597 98.0 1e-171 MKPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGHSETAFLLHSDDSDVRI RYFTPTVEVPICGHATVAAHYVRAKVLGLGNCTIWQTSLAGKHRVTIEKHNDDYRISLEQ GTPGFEPPLEGETREAIINALHLTEDDILPGLPIQVATTGHSKVMIPLKPEVDIDALSPD LAALSAISKQIGCNGFFPFQIRPGKNETDGRMFSPAIGIVEDPVTGNANGPMGAWLVHHN VLPHDGNVLCVKGHQGRALGRDGMIEVTVTIRDNQPEKVTISGTAVILFHAEWAIEL >gi|299857046|gb|ADWS01000018.1| GENE 7 4168 - 4848 487 226 aa, chain - ## HITS:1 COG:ECs2068 KEGG:ns NR:ns ## COG: ECs2068 COG2181 # Protein_GI_number: 15831322 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Escherichia coli O157:H7 # 1 226 1 226 226 420 100.0 1e-117 MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQMLDKRGMVIWSNLFHIGI LGIFFGHLFGMLTPHWMYAWFLPVAAKQLMAMVLGGICGVLTLIGGAGLLWRRLTNQRVR ATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKLVGWAQSIVTFRGGSSEMLNG VAFVFRLHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRSRR >gi|299857046|gb|ADWS01000018.1| GENE 8 4845 - 5540 871 231 aa, chain - ## HITS:1 COG:narW KEGG:ns NR:ns ## COG: narW COG2180 # Protein_GI_number: 16129425 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Escherichia coli K12 # 1 231 1 231 231 442 99.0 1e-124 MQILKVIGLLMEYPDELLWECKEDALALIRRDAPMLTDFTHNLLNAPLLDKQAEWCEVFD RGRTTSLLLFEHVHAESRDRGQAMVDLLAEYEKVGLQLDCRELPDYLPLYLEYLSVLPDD QAKEGLLNVAPILALLGGRLKQREAPWYALFDALLQLAGSSLSSDSVTKQVNSEERDDTR QALDAVWEEEQVKFIEDNATACDNSPLNQYQRRFSQDVAPQYVDISAGGGK >gi|299857046|gb|ADWS01000018.1| GENE 9 5540 - 7084 1474 514 aa, chain - ## HITS:1 COG:ECs2070 KEGG:ns NR:ns ## COG: ECs2070 COG1140 # Protein_GI_number: 15831324 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 1097 99.0 0 MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTGREGMEYAWFNNVETKPGIGYPKNWEDQE EWQGGWVRDVNGKIRPRLGSKMGVITKIFANPVVPQIDDYYEPFTFDYEHLHSAPEGKHI PTARPRSLIDGKRMDKVIWGPNWEELLGGEFEKRARDRNFEAMQKEMYGQFENTFMMYLP RLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRGWRLCISGCPYKKIYFNWKSGKS EKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYDADRIEEAASTEREVDLYERQCEVFL DPHDPSVIEEALKQGIPQNVIEAAQRSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSP IQSYADAGGLPKSEGVLPAIESLRIPVQYLANMLSAGDTGPVLRALKRMMAMRHYMRSQT VEGVTDTRAIDEVGLSVAQVEEMYRYLAIANYEDRFVIPTSHREMAGDAFAERNGCGFTF GDGCHGSDSKFNLFNSSRIDAINITEVRDKAEGE >gi|299857046|gb|ADWS01000018.1| GENE 10 7081 - 10821 3695 1246 aa, chain - ## HITS:1 COG:narZ KEGG:ns NR:ns ## COG: narZ COG5013 # Protein_GI_number: 16129427 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Escherichia coli K12 # 1 1246 1 1246 1246 2609 99.0 0 MSKLLDRFRYFKQKGETFADGHGQVMHSNRDWEDSYRQRWQFDKIVRSTHGVNCTGSCSW KIYVKNGLVTWEIQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLIRKRLIE LWREALKQHSDPVLAWASIMNDPQKCLSYKQVRGRGGFIRSNWQELNQLIAAANVWTIKT YGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFYDWYCDLPPASPMTWGEQTDVPE SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTIAITPDYSEVAKLCDQWLAPKQ GTDSALAMAMGHVILKEFHLDNPSDYFINYCRRYSDMPMLVMLEPRDDGSYVPGRMIRAS DLVDGLGESNNPQWKTVAVNTAGELVVPNGAIGFRWGEKGKWNLESIAAGTETELSLTLL GQHDAVAGVAFPYFGGIENPHFRSVKHNPVLVRQLPVKNLTLVDGNTCPVVSVYDLVLAN YGLDRGLEDENSAKDYAEIKPYTPAWGEQITGVPRQYIESIAREFADTAHKTHGRSMIIL GAGVNHWYHMDMNYRGMINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWLPLAFALDWNR PPRQMNSTSFFYNHSSQWRYEKVSAQELLSPLADASKYSGHLIDFNVRAERMGWLPSAPQ LGRNPLGIKAEADKAGLSPTEFTAQALKSGDLRMACEQPDSGSNHPRNLFVWRSNLLGSS GKGHEYMQKYLLGTESGIQGEELGASDGIKPEEVEWQTAAIEGKLDLLVTLDFRMSSTCL FSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESRSDWEIYKGIAKAFSQVCVGH LGKETDVVLQPLLHDSPAELSQPCEVLDWRKGECDLIPGKTAPNIVAVERDYPATYERFT SLGPLMDKLGNGGKGISWNTQDEIDFLGKLNYTKRDGPAQGRPLIDTAIDASEVILALAP ETNGHVAVKAWQALGEITGREHTHLALHKEDEKIRFRDIQAQPRKIISSPTWSGLESDHV SYNAGYTNVHELIPWRTLSGRQQLYQDHPWMRAFGESLVAYRPPIDTRSVSEMRQIPPNG FPEKALNFLTPHQKWGIHSTYSENLLMLTLSRGGPIVWISETDARELTIVDNDWVEVFNA NGALTARAVVSQRVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSVTRVCPKPTHMIGG YAQLAWGFNYYGTVGSNRDEFIMIRKMKNVNWLDDEGRDQVQEAKK >gi|299857046|gb|ADWS01000018.1| GENE 11 10903 - 12291 982 462 aa, chain - ## HITS:1 COG:narU KEGG:ns NR:ns ## COG: narU COG2223 # Protein_GI_number: 16129428 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Escherichia coli K12 # 1 462 1 462 462 774 99.0 0 MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNL NKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIA VQNTNTPFGVFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGA IARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAG LGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQKEAVTETAAALGFISAIGAVGGFFIPQ AFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK >gi|299857046|gb|ADWS01000018.1| GENE 12 12615 - 13910 259 431 aa, chain - ## HITS:1 COG:ECs2073 KEGG:ns NR:ns ## COG: ECs2073 COG4886 # Protein_GI_number: 15831327 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Escherichia coli O157:H7 # 81 431 67 417 419 528 90.0 1e-150 MKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPL AQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQLTHFNATNYDRLV KLSLNSNTLESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSAAHNQLEFVQLES CEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNTLLINNNLLSEIK IFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPI IKQSKNLNFLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFEVHSDGIDVDNEL FHYPINKAYTPYNIHTYKTEEVVNQRNIKVKNMTLDEINNTYCNNDYYNQAIREEPIDLL DRSFSSSSWPF >gi|299857046|gb|ADWS01000018.1| GENE 13 13970 - 14260 372 96 aa, chain - ## HITS:1 COG:ECs2076 KEGG:ns NR:ns ## COG: ECs2076 COG3203 # Protein_GI_number: 15831330 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 94 1 94 366 170 97.0 5e-43 MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLG FKGETQINDQMIGFGHWEYDFKGYNDEANGWRGNNL >gi|299857046|gb|ADWS01000018.1| GENE 14 14519 - 15343 671 274 aa, chain - ## HITS:1 COG:ECs2077 KEGG:ns NR:ns ## COG: ECs2077 COG0697 # Protein_GI_number: 15831331 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 274 20 293 293 475 99.0 1e-134 MVGLIRGVSEELGPVGGAAAIYSLSGLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICL ALSLGYAATRHQAIEVGMVNYLWPSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGG DNGLHYDEIINNITTSPLSYFLAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWV YYFLTPQPEMVFSTPVMIKLISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSAL AAVLLSAPLSFSFWQGALMVCGGSLLCWLATRRG >gi|299857046|gb|ADWS01000018.1| GENE 15 15632 - 16219 629 195 aa, chain + ## HITS:1 COG:fdnG KEGG:ns NR:ns ## COG: fdnG COG0243 # Protein_GI_number: 16129433 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 195 1 195 1015 412 100.0 1e-115 MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAKEIRNTCTYCSVGCGLL MYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYVNSENRLRYPEYRAPGSDK WQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLSTGMLCASGASNETGMLTQKF ARSLGMLAVDNQARV >gi|299857046|gb|ADWS01000018.1| GENE 16 16268 - 18679 2663 803 aa, chain + ## HITS:1 COG:ECs2078 KEGG:ns NR:ns ## COG: ECs2078 COG0243 # Protein_GI_number: 15831332 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 803 213 1015 1015 1672 99.0 0 MTNHWVDIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIY APIRSGTDITFLSGVLRYLIENDKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQ YDKSSWNYQFDENGYAKRDETLTHPRCVWNLLKAHVSRYTPDVVENICGTPKADFLKVCE VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLADQVNYWSNYPKFFVSLMKSF YGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDKNKVVSC LSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDGSIANSGRW LQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNYKQPHEPQSDE VAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYTGSWTEQGNQMAN RDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLIQWNGSKWTGNDIPD FGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETPLGTNPLHPNVVSNPVV RLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIAQPEQFVEISETLAAAKGI NNGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGIPIHWGFEGVARKGYIANTLT PNVGDANSQTPEYKAFLVNIEKA >gi|299857046|gb|ADWS01000018.1| GENE 17 18692 - 19576 920 294 aa, chain + ## HITS:1 COG:fdnH KEGG:ns NR:ns ## COG: fdnH COG0437 # Protein_GI_number: 16129434 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 294 1 294 294 612 100.0 1e-175 MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVG HCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQ YANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCP TGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEGVGGTHVMYVLHHADQPELYHGL PKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHYIGIGPNKEVDDDEEDHHE >gi|299857046|gb|ADWS01000018.1| GENE 18 19569 - 20222 870 217 aa, chain + ## HITS:1 COG:STM1568 KEGG:ns NR:ns ## COG: STM1568 COG2864 # Protein_GI_number: 16764912 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 217 1 217 218 408 98.0 1e-114 MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFF GIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSI MSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVKGSI KGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI >gi|299857046|gb|ADWS01000018.1| GENE 19 20273 - 20557 278 94 aa, chain - ## HITS:1 COG:yddM KEGG:ns NR:ns ## COG: yddM COG3093 # Protein_GI_number: 16129436 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Escherichia coli K12 # 1 94 27 120 120 169 100.0 1e-42 MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVI GSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ >gi|299857046|gb|ADWS01000018.1| GENE 20 20703 - 21713 953 336 aa, chain - ## HITS:1 COG:adhP KEGG:ns NR:ns ## COG: adhP COG1064 # Protein_GI_number: 16129437 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli K12 # 1 336 11 346 346 606 99.0 1e-173 MKAAVVTKDHHVDVTYKTLRSLKHGEALLKMECCGVCHTDLHVKNGDFGDKTGVILGHEG IGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETLCRSVKNAGYSVDGGMAEE CIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKIRPGQWIAIYGLGGLGNLALQY AKNVFNAKVIAIDVNDEQLKLATEMGADLAINSRTEDAAKIVQEKTGGAHSAVVTAVAKA AFNSAVDAVRAGGRVVAVGLPPESMSLDIPRLVLDGIEVVGSLVGTRQDLTEAFQFAAEG KVVPKVALRPLADINTIFTEMEEGKIRGRMVIDFRH >gi|299857046|gb|ADWS01000018.1| GENE 21 21847 - 23544 1899 565 aa, chain - ## HITS:1 COG:sfcA KEGG:ns NR:ns ## COG: sfcA COG0281 # Protein_GI_number: 16129438 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Escherichia coli K12 # 1 565 10 574 574 1142 100.0 0 MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERA WIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYR RSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYT ACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVF LGAGSAGCGIAEMIISQTQREGLSEEAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRE NLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPT SRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGAS RITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVKTS AEALQQAIDDNFWQAEYRDYRRTSI >gi|299857046|gb|ADWS01000018.1| GENE 22 23701 - 23838 230 45 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15801657|ref|NP_287675.1| 30S ribosomal subunit S22 [Escherichia coli O157:H7 EDL933] # 1 45 1 45 45 93 100 4e-18 MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAEK >gi|299857046|gb|ADWS01000018.1| GENE 23 23940 - 24155 298 71 aa, chain - ## HITS:1 COG:no KEGG:B21_01451 NR:ns ## KEGG: B21_01451 # Name: bdm # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 71 1 71 71 129 100.0 4e-29 MFTYYQAENSTAEPALVNAIEQGLRAQHGVVTEDDILMELTKWVEASDNDILSDIYQQTI NYVVSGQHPTL >gi|299857046|gb|ADWS01000018.1| GENE 24 24500 - 24931 531 143 aa, chain + ## HITS:1 COG:osmC KEGG:ns NR:ns ## COG: osmC COG1764 # Protein_GI_number: 16129441 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli K12 # 1 143 1 143 143 270 100.0 5e-73 MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEKGTNPEELIGAAHAACF SMALSLMLGEAGFTPTSIDTTADVSLDKVDAGFAITKIALKSEVAVPGIDASTFDGIIQK AKAGCPVSQVLKAEITLDYQLKS >gi|299857046|gb|ADWS01000018.1| GENE 25 24987 - 25913 617 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 291 8 310 329 242 40 6e-63 MSDTLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQ LLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRVITEPLWIAKRSSEQQRRA LAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLDEPTSALDISVQAQ ILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDAQQVLTAPAHPYTR LLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFFYERCPLATHGCEVRQSLAIREDGR ELRCWRAL >gi|299857046|gb|ADWS01000018.1| GENE 26 25906 - 26892 467 328 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 20 316 33 324 329 184 37 1e-45 MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLQ TGSYCVHRGQISLLGDDVLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIR HHQPISRREARAKAIALLEEMQIPDAVEVMSRYPFELSGGMRQRVMIALAFSCEPQLIIA DEPTTALDVTLQLQVLRLLKHKARASGTAVLFISHDMVVVSQLCDSVYVMYAGSVIESGV TADIIHHPRHPYTIGLLQCAPEHGVPRQPLPAIPGTVPNLTHLPEGCAFRDRCYAAGAQC ENVPALTACGDNNQRCACWYPQQEVISV >gi|299857046|gb|ADWS01000018.1| GENE 27 26889 - 27782 788 297 aa, chain - ## HITS:1 COG:ECs2089 KEGG:ns NR:ns ## COG: ECs2089 COG1173 # Protein_GI_number: 15831343 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 297 2 298 298 537 99.0 1e-153 MLSEETSAVRPQKQTRFNGAELVWMLKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAI DLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVL GGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALV VRQYTYVQAAKTFGASRWHLISWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQ PSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGGKQS >gi|299857046|gb|ADWS01000018.1| GENE 28 27782 - 28804 315 340 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 70 332 46 310 320 125 29 6e-28 MTFWSILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDRASNAIVENIRQQLGLD QPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFCALLLALLIGIPLGI LSAVWRNRWLDHLVRLMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDDWLDPPTHV TGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTAR ASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQAL DFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRIGRGGGE >gi|299857046|gb|ADWS01000018.1| GENE 29 28806 - 30356 1720 516 aa, chain - ## HITS:1 COG:ddpA KEGG:ns NR:ns ## COG: ddpA COG0747 # Protein_GI_number: 16129446 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 516 1 516 516 1006 99.0 0 MKRSIPFRPTLLALVLATNFPVAHAAVPKDMLVIGKATDPQTLDPAVTIDNNDWTVTYPS YQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDNAKFADGTPVTAEAVKLSF ERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFLYTLANDGASIINPAVLKEHA ADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYPGNKPNFKRVSVKIIGESASRRL QLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLRVTYLYLNNSKAPLNQADLRRAISW STDYQGMVNGILSGNGKQMRGPIPEGMWGYDATAMQYNHDETKAKAEWDKVTSKPTSLTF LYSDNDPNWEPIALATQSSLNKLGINVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADP YMFMNYWFESDKKGLPGNRSFYENSEVDKLLRNALATTDQTQRTRDYQQAQKIVIDDAAY VYLFQKNYQLAMNKEVKGFVFNPMLEQVFNINTMSK >gi|299857046|gb|ADWS01000018.1| GENE 30 30370 - 30951 426 193 aa, chain - ## HITS:1 COG:ECs2092 KEGG:ns NR:ns ## COG: ECs2092 COG2173 # Protein_GI_number: 15831346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine dipeptidase # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 397 100.0 1e-111 MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLS GLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGA GFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISSEWWHFELPQAASYPLLADQ FTCFISPGTQHVS >gi|299857046|gb|ADWS01000018.1| GENE 31 31209 - 33608 2045 799 aa, chain - ## HITS:1 COG:ECs2094_1 KEGG:ns NR:ns ## COG: ECs2094_1 COG2202 # Protein_GI_number: 15831348 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 705 100.0 0 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM PIHWASSSHGAEVQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK PIMIDDKPFPLTLSIGISYDVGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPQHGHVPPSRFIPLAEE IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR PLPAEEIPGWMSSVLPLKI >gi|299857046|gb|ADWS01000018.1| GENE 32 33633 - 35015 1195 460 aa, chain - ## HITS:1 COG:ECs2095_2 KEGG:ns NR:ns ## COG: ECs2095_2 COG2199 # Protein_GI_number: 15831349 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 # 269 460 1 192 192 367 100.0 1e-101 MEMYFKRMKDEWTGLVEQADPLIRAKAAEIALAHAHYLSIEFYRIVRIDPHAEEFLSNEQ VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE EKERQIASILSWEIDIIYKVLLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL >gi|299857046|gb|ADWS01000018.1| GENE 33 35388 - 36542 819 384 aa, chain - ## HITS:1 COG:ECs2096 KEGG:ns NR:ns ## COG: ECs2096 COG1649 # Protein_GI_number: 15831350 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 384 56 439 439 759 99.0 0 MRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLGINTVFFQVKPDGT ALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSVNTKPGTIR ELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRYPVDGVQFD DYFYTESPGSLLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEFGVSP AGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLDYIAPQIYWPFSRSAARYDVLA KWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMINGGVPELKKQLDLNDAVPEISGTIL FREDYLNKPQTQQAVSYLQSRWGS >gi|299857046|gb|ADWS01000018.1| GENE 34 36838 - 38373 1547 511 aa, chain - ## HITS:1 COG:xasA KEGG:ns NR:ns ## COG: xasA COG0531 # Protein_GI_number: 16129451 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 511 1 511 511 895 100.0 0 MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLC AAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKW PALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLH SGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLL LMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLG VLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTG GGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGL LTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHDRKGKANTGVTLE PINSQNAPKGHFFLHPRARSPHYIVMNDKKH >gi|299857046|gb|ADWS01000018.1| GENE 35 38529 - 39929 1602 466 aa, chain - ## HITS:1 COG:gadA KEGG:ns NR:ns ## COG: gadA COG0076 # Protein_GI_number: 16131389 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Escherichia coli K12 # 1 466 1 466 466 1000 100.0 0 MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNL ATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVG TNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREI PMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDM HIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELV FNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKL GPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVV MRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT >gi|299857046|gb|ADWS01000018.1| GENE 36 39862 - 40008 89 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAFAPKRESSSSERKSVNSFWSISNSLNLFEGNKKVGFIRNGSKALQA >gi|299857046|gb|ADWS01000018.1| GENE 37 40140 - 41537 1287 465 aa, chain - ## HITS:1 COG:yhjA KEGG:ns NR:ns ## COG: yhjA COG1858 # Protein_GI_number: 16131390 # Func_class: P Inorganic ion transport and metabolism # Function: Cytochrome c peroxidase # Organism: Escherichia coli K12 # 1 465 1 465 465 967 99.0 0 MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNKVLGFLREKGCD YCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVM QYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYASNDTAPEHRNEPVQPIPQKL PTDAQKVVLGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF NSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKAQFLEVYPQG FSGENITDAIAEFEKTLITPDSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIIL GGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGDVP TLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ >gi|299857046|gb|ADWS01000018.1| GENE 38 41942 - 43591 1634 549 aa, chain + ## HITS:1 COG:ECs4399 KEGG:ns NR:ns ## COG: ECs4399 COG1626 # Protein_GI_number: 15833653 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 1109 99.0 0 MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMIEGLPASDALTPADRYL ELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRDFDLRKFVENHFWLPEVYS SEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQSYIVPGGRFSETYYWDSYFT MLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYYLSRSQPPVFALMVELFEEDGVR GARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLEDV ETAKNSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLFKLES AIANISALKGEKETEALFRQKASARRDAVNRYLWDDENGIYRDYDWRREQLALFSAAAIV PLYVGMANHEQADRLANAVRSRLLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMY GDDLLGDEIARSWLKTVNQFYLEQHKMIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVR RLIGLYGEP >gi|299857046|gb|ADWS01000018.1| GENE 39 43642 - 44244 400 200 aa, chain - ## HITS:1 COG:yhjB KEGG:ns NR:ns ## COG: yhjB COG2197 # Protein_GI_number: 16131392 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli K12 # 1 200 1 200 200 394 100.0 1e-110 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL YRRLEVKNRTQAAMMLNISS >gi|299857046|gb|ADWS01000018.1| GENE 40 44782 - 45663 705 293 aa, chain + ## HITS:1 COG:yhjC KEGG:ns NR:ns ## COG: yhjC COG0583 # Protein_GI_number: 16131393 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 293 31 323 323 585 99.0 1e-167 MQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYY QRAKDVLSNLSELDGLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPGIELELS SHDRPVDILHDGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTS HAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLAAGLAGLGIIQIPRIAV REALRAGRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEHLD >gi|299857046|gb|ADWS01000018.1| GENE 41 45712 - 46725 1056 337 aa, chain + ## HITS:1 COG:ECs4402 KEGG:ns NR:ns ## COG: ECs4402 COG1295 # Protein_GI_number: 15833656 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 337 1 337 337 663 100.0 0 MTQENEIKRPTQDLEHEPIKQLDNSEKGGKVSQALETVTTTAEKVQRQPVIAHLIRATER FNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLA ATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWV KYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFA NYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMKSPSGAAFGSVL GLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGKTQP >gi|299857046|gb|ADWS01000018.1| GENE 42 47136 - 48458 1621 440 aa, chain + ## HITS:1 COG:yhjE KEGG:ns NR:ns ## COG: yhjE COG0477 # Protein_GI_number: 16131395 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 440 1 440 440 683 100.0 0 MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATAAVIVFPHIFFPQGDPT AATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLLTMGISTVVIGLLPGYATI GIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRALYGSFPQLGAPIGFFFANGT FLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHESPVFEKVAKAKKQVKIPLG TLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFSTAAAPVGLGLPRNEVLWMLMMAVIG FGVMVPVAGLLADAFGRRKSMVIITTLIILFALFAFNPLLGSGNPILVFAFLLLGLSLMG LTFGPMGALLPELFPTEVRYTGASFSYNVASILGASVAPYIAAWLQTNYGLGAVGLYLAA MAGLTLIALLLTHETRHQSL >gi|299857046|gb|ADWS01000018.1| GENE 43 48692 - 50752 1587 686 aa, chain - ## HITS:1 COG:yhjG KEGG:ns NR:ns ## COG: yhjG COG2982 # Protein_GI_number: 16131396 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli K12 # 1 686 6 691 691 1327 100.0 0 MSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVW ERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPW IKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVS KADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGML ALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLP DTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQ LRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDADVRFK GRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQGRADIQ ARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNL MEIVGLNVGNYIVGAIFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASF ASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPA AALLALISPSEGEANQCRTILSQMKK >gi|299857046|gb|ADWS01000018.1| GENE 44 50822 - 51589 659 255 aa, chain - ## HITS:1 COG:yhjH KEGG:ns NR:ns ## COG: yhjH COG2200 # Protein_GI_number: 16131397 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 1 255 2 256 256 508 100.0 1e-144 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPS QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI LRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKI ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS RPAPIETLNTAVLAL >gi|299857046|gb|ADWS01000018.1| GENE 45 51821 - 52750 1013 309 aa, chain + ## HITS:1 COG:ECs4406 KEGG:ns NR:ns ## COG: ECs4406 COG0524 # Protein_GI_number: 15833660 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 309 74 382 382 626 99.0 1e-179 MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFS QQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAA ICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANGGKVIFDNNYRPRLWASKEET QQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAG EGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRGA IIPREAMPA >gi|299857046|gb|ADWS01000018.1| GENE 46 52846 - 54300 1502 484 aa, chain - ## HITS:1 COG:ECs4407 KEGG:ns NR:ns ## COG: ECs4407 COG0612 # Protein_GI_number: 15833661 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Escherichia coli O157:H7 # 1 484 15 498 498 898 99.0 0 MMATAGYVQADALQPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQ SGYSHAIPRIALTQSGGLDAAQARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDL LKEALSYLANATGKLTITPETINHALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPAD PLKQPVEAEKIKDFYQKWYTPDAMTLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPT LSPLRAEAVSIMTDAVRQDRLSIMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALS ASNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNAL VAQKKLELQKLFAAYARADTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLN QDLRQQLSNDMALILLQPKGEPEFNMKALQAAWDQIMAPSTTAATTSVATDDVHPEVTDI PPAQ >gi|299857046|gb|ADWS01000018.1| GENE 47 54563 - 55849 1488 428 aa, chain - ## HITS:1 COG:dctA KEGG:ns NR:ns ## COG: dctA COG1301 # Protein_GI_number: 16131400 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Escherichia coli K12 # 1 428 1 428 428 733 100.0 0 MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKLIKMIIAPVIFCTVVTG IAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPGAGMNVDPATLDAKAVAVY ADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLFGFALHRLGSKGQLIFNVIES FSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVLVLGS IAKATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSF NLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLIVLLLSSKGAAGVTGSGFIVLAATLSA VGHLPVAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWVKELDHKKLDDVLNNRAPD GKTHELSS >gi|299857046|gb|ADWS01000018.1| GENE 48 56032 - 58020 1937 662 aa, chain - ## HITS:1 COG:ECs4409_3 KEGG:ns NR:ns ## COG: ECs4409_3 COG2200 # Protein_GI_number: 15833663 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 400 662 1 263 263 508 99.0 1e-143 MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSA ILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQI SLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINR LILHPLRNIARELNAIPAQELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNE NAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLV EKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHC SIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNAL ENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVL EESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRR IDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPED SSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLE EK >gi|299857046|gb|ADWS01000018.1| GENE 49 58102 - 61575 3256 1157 aa, chain - ## HITS:1 COG:ZyhjLm KEGG:ns NR:ns ## COG: ZyhjLm COG0457 # Protein_GI_number: 15804991 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli O157:H7 EDL933 # 1 1157 1 1154 1154 2120 98.0 0 MRKFTLNIFTLSLGLAVMPMVEAAPTAQQQLLEQVRLGEATHREDLVQQSLYRLELIDPN NPDVVAARFRSLLRQGDIDGAQKQLDRLSQLAPSSNAYKSSRTTMLLSTPDGRQALQQAR LQATTGHAEEAVASYNKLFNGAPPEGDIAVEYWSTVAKIPARRGEAINQLKRINADAPGN TGLQNNLALLLFSSDRRDEGFAVLEQMAKSNAGREGASKIWYGQIKDMPVSDASVSALKK YLSIFSDGDSVAAAQSQLAEQQKQLADPAFRARAQGLAAVDSGMAGKAIPELQQAVRANP KDSEALGALGQAYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDA ALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDSGNTN AVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQA AALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLS GHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRESGKEAEAEAMLRQQP PSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGLTEVDIAAGDTAAARSQL AKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKSQPPSMESAMVLRDGAKF EAQAGDPKQALETYKDAMVASGVTTTRPQDNDTFTRLTRNDEKDDWLKRGVRSDAADLYR QQDLNVTLEHDYWGSSGTGGYSDLKAHTTMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNA DGKWDDNWGTCTLQDCSGNRSQSDSGASVAVGWRNDVWSWDIGTTPMGFNVVDVVGGISY SDDIGPLGYTVNAHRRPISSSLLAFGGQKDSPSNTGKKWGGVRADGVGLSLSYDKGEANG VWASLSVDQLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLG QGGYYSPQEYLSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEE AARQSNDGGSSQGFGYTARALLERRVTSNWFVGTAIDIQQAKDYAPSHFLLYVRYSAAGW QGDMDLPPQPLIPYADW >gi|299857046|gb|ADWS01000018.1| GENE 50 61557 - 62663 1097 368 aa, chain - ## HITS:1 COG:ECs4411 KEGG:ns NR:ns ## COG: ECs4411 COG3405 # Protein_GI_number: 15833665 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Escherichia coli O157:H7 # 1 368 1 368 368 724 99.0 0 MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYG MFFALAANDRVAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVW MAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNP SYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLIS SYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGF SAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW GQECANSH >gi|299857046|gb|ADWS01000018.1| GENE 51 62670 - 65009 2347 779 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4260 NR:ns ## KEGG: ECO103_4260 # Name: bcsB # Def: cellulose synthase regulator protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 779 1 779 779 1516 99.0 0 MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTEQNPQVGQVMLGVQGAD APVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGMRSDEVVTKAMLNLEYTPS PSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPINPLFITDFNRVRLEFVGHYQD VCENPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPVPFFDPRDNRTNTLPMVFAGAPD VGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRNAIVFATNDKRPDFLRDHPAVKAPV IEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGESVVVNEVKPLLPRKPYDA PNWVRTDRPVTFGELKTYEEQLQSSGLEPAAINVSLNLPPDLYLMRSTGIDMDINYRYTM PPVKDSSRMDISLNNQFLQSFNLSSKQEANRLLLRIPVLQGLLDGKTDVSIPALKLGATN QLRFDFEYMNPMPGGSVDNCITFQPVQNHVVIGDDSTIDFSKYYHFIPMPDLRAFANAGF PFSRMADLSQTITVMPKAPNEAQMETLLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDAD IMIIGGIPDKLKDDKQIDLLVQATESWVKTPMRQTPFPGIVPDESDRAAETRSTLTSSGA MAAVIGFQSPYNDQRSVIALLADSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLR VGDVYYVGHLPWFERLWYALANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE >gi|299857046|gb|ADWS01000018.1| GENE 52 65020 - 67638 2401 872 aa, chain - ## HITS:1 COG:yhjO KEGG:ns NR:ns ## COG: yhjO COG1215 # Protein_GI_number: 16131405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 872 17 888 888 1811 100.0 0 MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILAWIFIPLEHPRWQRIRA EHKNLYPHINASRPRPLDPVRYLIQTCWLLIGASRKETPKPRRRAFSGLQNIRGRYHQWM NELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSLILALICVTQPFNPLAQFIFL MLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAE TYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVDIFVPTYNEDLNVVKNTIYASLGID WPKDKLNIWILDDGGREEFRQFAQNVGVKYIARTTHEHAKAGNINNALKYAKGEFVSIFD CDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQ DGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAA GLATESLSAHIGQRIRWARGMVQIFRLDNPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIF LTAPLAFLLLHAYIIYAPALMIALFVLPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWY IAPPTLVALINPHKGKFNVTAKGGLVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYG PPTEMLTVVVSMVWVFYNLIVLGGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCT VQDFSDGGLGIKINGQAQILEGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQ QHIDFVQCTFARADTWALWQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRV LTSLVSWVVSFIPRRPERSETAQPSDQALAQQ >gi|299857046|gb|ADWS01000018.1| GENE 53 67635 - 68387 630 250 aa, chain - ## HITS:1 COG:yhjQ KEGG:ns NR:ns ## COG: yhjQ COG1192 # Protein_GI_number: 16131406 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Escherichia coli K12 # 9 250 1 242 242 477 99.0 1e-134 MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWAR AMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQW ILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQ DDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYS GLKTPVGSAS >gi|299857046|gb|ADWS01000018.1| GENE 54 68399 - 68587 227 62 aa, chain - ## HITS:1 COG:no KEGG:SSON_3856 NR:ns ## KEGG: SSON_3856 # Name: yhjR # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 62 1 62 62 108 100.0 7e-23 MNNNEPDTLPDPAIGYIFQNDIVALKQAFSLPDIDYADISQREQLAAALKRWPLLAEFAQ QK >gi|299857046|gb|ADWS01000018.1| GENE 55 69337 - 70431 844 364 aa, chain + ## HITS:1 COG:no KEGG:SBO_3535 NR:ns ## KEGG: SBO_3535 # Name: yhjS # Def: putative protease # Organism: S.boydii # Pathway: not_defined # 1 364 160 523 523 735 99.0 0 MLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEI QPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPL ARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESVQ GQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPV PGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRM VWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAV ERSS >gi|299857046|gb|ADWS01000018.1| GENE 56 70428 - 70619 211 63 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4265 NR:ns ## KEGG: ECO103_4265 # Name: bcsF # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 63 1 63 63 104 100.0 9e-22 MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPRYVKPAGTLRRTEKARA TKK >gi|299857046|gb|ADWS01000018.1| GENE 57 70616 - 72295 1240 559 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_4904 NR:ns ## KEGG: ECH74115_4904 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 559 1 559 559 1090 100.0 0 MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPIPR YSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIG AIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAA TVAATGGAPVVGDMPAQTAPPTTANLNAWLNNFYNAEAKRKSTFPSSLPADAQPFELLVI NICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQ PANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQTELMDQTNLPVILLGFD GSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDE LDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAP HQGAPIVIDQPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQ YQDKPYVRLNGGDWVPYPQ >gi|299857046|gb|ADWS01000018.1| GENE 58 72382 - 72579 101 65 aa, chain - ## HITS:1 COG:no KEGG:ECSE_3808 NR:ns ## KEGG: ECSE_3808 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 65 16 80 80 127 100.0 9e-29 MHLTTSRGPFLNLNNSRIAAKRCHYNTGGYMTLAELGMAFWHDLAAPVIAGILASMIVNW LNKRK >gi|299857046|gb|ADWS01000018.1| GENE 59 72965 - 74236 1074 423 aa, chain + ## HITS:1 COG:yhjV KEGG:ns NR:ns ## COG: yhjV COG0814 # Protein_GI_number: 16131411 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli K12 # 1 423 1 423 423 702 99.0 0 MQHNTLSKHNQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGLKGIWVFITAAIIAYPA TWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVVFDS ASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLFKISGPMVVVKVGIIVVFGFA MIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKREADKVLATRL ALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAFEQNISALALAAQVIPGHIIHITST VLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRIIDTKKINSRMLTLAICAFIVITLTIWV SFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKVAQLEKLRGFKAWLILLYGILLCLSPLLK LIE >gi|299857046|gb|ADWS01000018.1| GENE 60 74266 - 75270 801 334 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 328 2 329 329 313 47 3e-84 MSTQEATSQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCG KSTLGRLLTMIEMPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQ ILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDP DVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRC VEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCR RRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR >gi|299857046|gb|ADWS01000018.1| GENE 61 75267 - 76250 575 327 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 315 11 324 329 226 40 4e-58 MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYP GRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ GGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP TTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAE EPALNMLADGRQSKCHYPLDDAGRPTL >gi|299857046|gb|ADWS01000018.1| GENE 62 76261 - 77163 1277 300 aa, chain - ## HITS:1 COG:ECs4422 KEGG:ns NR:ns ## COG: ECs4422 COG1173 # Protein_GI_number: 15833676 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 300 1 300 300 486 100.0 1e-137 MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAEQ FRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGVILG LIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIGNAALALTFVALPHYVRLT RAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFL GMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLKQ >gi|299857046|gb|ADWS01000018.1| GENE 63 77173 - 78192 355 339 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 66 333 43 310 320 141 29 1e-32 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK >gi|299857046|gb|ADWS01000018.1| GENE 64 78343 - 79950 2123 535 aa, chain - ## HITS:1 COG:dppA KEGG:ns NR:ns ## COG: dppA COG0747 # Protein_GI_number: 16131416 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 535 1 535 535 1091 100.0 0 MRISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPL YNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVF SFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAM DFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQID TLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQ KKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAK ALLKEAGLEKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKR AKDGEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDH NKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE >gi|299857046|gb|ADWS01000018.1| GENE 65 80302 - 80808 -144 168 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_3865 NR:ns ## KEGG: EcSMS35_3865 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 86 168 5 87 87 155 93.0 4e-37 MRTSGGWEVRLERSERTLRQQRPAGRATKWRVILYHRPNSKSLLNEQAFLHLQLMRMRTS GGREVRLDVGLIRRVSVASGNGTALIVGCGVNALFDLHATHFPAKFAPHISLSINGFVTE TIVFFYICLNLFLRYLWLALAFSAVRFSVHGINRSDIHLFLRFFSLNA >gi|299857046|gb|ADWS01000018.1| GENE 66 81199 - 82890 1706 563 aa, chain - ## HITS:1 COG:yhjW KEGG:ns NR:ns ## COG: yhjW COG2194 # Protein_GI_number: 16131417 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 563 12 574 574 1155 99.0 0 MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWKGVSAVVELAATVLVTF FLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYGIIASVMTTDIDLSKEVVG LNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRSLAVVVLAGIMVWAPIRLLDI QQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAWARVDESSDNNSLLNPAKKFTYQ APQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKLAQEKNLAAFRGYSCDTATKLSLRC MFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDLYAMQSEMWFYSNTMADNIAYREQIGA EPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLIILHTKGSHFNYTQRYPRSFAQWKPECIG VDSGCTKAQMINSYDNSVTYVDHFISSVIDQVRDKKAIVFYAADHGESINEREHLHGTPR ELAPPEQFRVPMMVWMSDKYLENPANAQAFAQLKKEADMKVPRRHVELYDTIMGCLGYTS PDGGINENNNWCHIPQAKEAAAN >gi|299857046|gb|ADWS01000018.1| GENE 67 83214 - 84422 1477 402 aa, chain - ## HITS:1 COG:yhjX KEGG:ns NR:ns ## COG: yhjX COG0477 # Protein_GI_number: 16131418 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 402 1 402 402 678 99.0 0 MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLA ISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSNNLMMLWLSAGVLVGLADGAGYLL TLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLETVGLEKTFVIWGAIALVMIV FGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDI AQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFA PLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSIFGSIIA SLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHGSL >gi|299857046|gb|ADWS01000018.1| GENE 68 84651 - 85349 478 232 aa, chain - ## HITS:1 COG:ECs4433 KEGG:ns NR:ns ## COG: ECs4433 COG5571 # Protein_GI_number: 15833687 # Func_class: N Cell motility # Function: Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion # Organism: Escherichia coli O157:H7 # 1 232 3 234 234 426 99.0 1e-119 MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGHSTERYTWDSDHQPDYND ILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSM YNEFGDSTTTLTDPLWHASVSSLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRM TATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF >gi|299857046|gb|ADWS01000018.1| GENE 69 85507 - 86070 357 187 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 1 181 1 181 185 142 38 8e-33 MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACF HQFDPVKVAAMQEEDVERLVQDGGIIRHRGKIQAIIGNARAYLQMEQNGEPFADFVWSFV NHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGCC CYPGNKP >gi|299857046|gb|ADWS01000018.1| GENE 70 86067 - 86507 436 146 aa, chain + ## HITS:1 COG:yiaC KEGG:ns NR:ns ## COG: yiaC COG0454 # Protein_GI_number: 16131421 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 146 1 146 146 280 97.0 7e-76 MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAYLANAQNWVWEEDGKLL GFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRYPHLMLEVYQKNQPAIDFYRAQGF HIVDCAWQDETQLPTWIMSWPVVQTL >gi|299857046|gb|ADWS01000018.1| GENE 71 86476 - 88809 1897 777 aa, chain - ## HITS:1 COG:bisC KEGG:ns NR:ns ## COG: bisC COG0243 # Protein_GI_number: 16131422 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 39 777 1 739 739 1520 98.0 0 MANSSSRYSVLTAAHWGPMLVETDGETVFSSHGALATGMENSLQSAVRDQVHSNTRVRFP MVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQHKRIREAYGPASIFAGSYGWRSN GVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSD VVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVA PHMGTDVALMLGIAHTLVENGWHDEAFLTRCTTGYAVFASYLLGESDGIAKNAEWAAEIC GVNAAKIRELAALFHQNTTMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLS YHFANGGNPTRRSAVLSSMQGSLPGGCDAVDKIPVARIVEALENPGGAYQHNGMNRHFPD IRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDL TMTGDYSNQHLVPMKQVVPPRYEARNDFDVFAELSERWEKGGYARFTEGKSQLQWLETFY NVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERFIRFADFCRDPLAHPLKTASGKI EIFSQRIADYGYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELY AVANREPVTIHPDDAQARGITEGDMVRVWNSRGQILAGAVISEGIKPGVICIHEGAWPDL DLTADGICKNGAVNVLTKDLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS >gi|299857046|gb|ADWS01000018.1| GENE 72 88962 - 89621 213 219 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 113 214 243 344 347 86 37 4e-16 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG VDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL >gi|299857046|gb|ADWS01000018.1| GENE 73 89725 - 90699 902 324 aa, chain + ## HITS:1 COG:ECs4438 KEGG:ns NR:ns ## COG: ECs4438 COG1052 # Protein_GI_number: 15833692 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 324 5 328 328 645 100.0 0 MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVDAAL LEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVE VAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHH KEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPV VDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAAC AVDNLIDALQGKVEKNCVNPHVAD >gi|299857046|gb|ADWS01000018.1| GENE 74 90749 - 91459 695 236 aa, chain - ## HITS:1 COG:no KEGG:SBO_3556 NR:ns ## KEGG: SBO_3556 # Name: yiaF # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 236 41 276 276 432 99.0 1e-120 MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQK KQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV LAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVM VGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ >gi|299857046|gb|ADWS01000018.1| GENE 75 91893 - 92183 237 96 aa, chain + ## HITS:1 COG:ECs4440 KEGG:ns NR:ns ## COG: ECs4440 COG2944 # Protein_GI_number: 15833694 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 164 100.0 5e-41 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME >gi|299857046|gb|ADWS01000018.1| GENE 76 92464 - 92676 301 70 aa, chain + ## HITS:1 COG:ECs4441 KEGG:ns NR:ns ## COG: ECs4441 COG1278 # Protein_GI_number: 15833695 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 122 100.0 1e-28 MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAK GPAAGNVTSL >gi|299857046|gb|ADWS01000018.1| GENE 77 92864 - 93076 151 70 aa, chain - ## HITS:1 COG:no KEGG:ECSE_3831 NR:ns ## KEGG: ECSE_3831 # Name: not_defined # Def: small toxic polypeptide # Organism: E.coli_SE11 # Pathway: not_defined # 1 70 1 70 70 132 98.0 4e-30 MPEHHKVSLLLVGNQHRGLGMPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYEL AAFLACNLKE >gi|299857046|gb|ADWS01000018.1| GENE 78 93118 - 93306 103 62 aa, chain - ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 62 222 283 283 124 98.0 5e-29 MVECFFGTLKSECFYLDEFSNISELKDAVTEYIEYYNSRRISLKLKGLTPIEYRNQTYMP RV Prediction of potential genes in microbial genomes Time: Sun May 15 22:19:31 2011 Seq name: gi|299857045|gb|ADWS01000019.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont18.1, whole genome shotgun sequence Length of sequence - 92903 bp Number of predicted genes - 84, with homology - 84 Number of transcription units - 42, operones - 14 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 6/0.120 - CDS 464 - 1009 486 ## COG4635 Flavodoxin 2 1 Op 2 4/0.560 - CDS 1021 - 2472 1446 ## COG0168 Trk-type K+ transport systems, membrane components 3 1 Op 3 2/0.880 - CDS 2511 - 3053 526 ## COG1739 Uncharacterized conserved protein 4 1 Op 4 . - CDS 3125 - 4456 1659 ## COG0006 Xaa-Pro aminopeptidase - Prom 4578 - 4637 3.3 + Prom 4524 - 4583 6.1 5 2 Op 1 20/0.000 + CDS 4646 - 6835 2746 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 6 2 Op 2 . + CDS 6845 - 8008 1341 ## COG0183 Acetyl-CoA acetyltransferase + Term 8169 - 8201 2.1 7 3 Op 1 6/0.120 - CDS 8200 - 8901 727 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 8 3 Op 2 . - CDS 8947 - 10440 1566 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases - Prom 10515 - 10574 3.9 + Prom 10454 - 10513 6.4 9 4 Tu 1 . + CDS 10607 - 11095 381 ## COG0250 Transcription antiterminator + Term 11130 - 11167 1.0 10 5 Op 1 2/0.880 - CDS 11092 - 11874 577 ## COG0084 Mg-dependent DNase - Term 11882 - 11909 1.5 11 5 Op 2 28/0.000 - CDS 11916 - 12692 810 ## COG0805 Sec-independent protein secretion pathway component TatC 12 5 Op 3 16/0.000 - CDS 12695 - 13210 428 ## COG1826 Sec-independent protein secretion pathway components 13 5 Op 4 6/0.120 - CDS 13214 - 13483 200 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 - Term 13506 - 13540 -1.0 14 5 Op 5 10/0.040 - CDS 13562 - 15202 1584 ## COG0661 Predicted unusual protein kinase 15 5 Op 6 7/0.120 - CDS 15199 - 15804 693 ## COG3165 Uncharacterized protein conserved in bacteria 16 5 Op 7 5/0.440 - CDS 15818 - 16573 363 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 - Prom 16600 - 16659 3.2 17 5 Op 8 4/0.560 - CDS 16668 - 18080 1546 ## COG1322 Uncharacterized protein conserved in bacteria - Prom 18128 - 18187 3.0 - Term 18185 - 18219 5.2 18 6 Tu 1 . - CDS 18236 - 18997 977 ## COG2820 Uridine phosphorylase - Prom 19244 - 19303 6.5 + Prom 19172 - 19231 5.3 19 7 Tu 1 . + CDS 19259 - 20074 798 ## COG0412 Dienelactone hydrolase and related enzymes + Term 20161 - 20198 1.8 - Term 20073 - 20105 6.3 20 8 Tu 1 . - CDS 20113 - 22374 2524 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 22422 - 22481 3.0 + Prom 22399 - 22458 4.9 21 9 Tu 1 . + CDS 22492 - 23445 706 ## COG0583 Transcriptional regulator 22 10 Op 1 3/0.720 - CDS 23333 - 24232 1054 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 23 10 Op 2 5/0.440 - CDS 24308 - 25108 923 ## COG0561 Predicted hydrolases of the HAD superfamily 24 10 Op 3 . - CDS 25116 - 26138 622 ## COG2267 Lysophospholipase - Prom 26284 - 26343 3.6 + Prom 26117 - 26176 4.9 25 11 Tu 1 . + CDS 26249 - 26869 563 ## COG1280 Putative threonine efflux protein + Term 26878 - 26919 6.4 - Term 26866 - 26907 2.6 26 12 Op 1 4/0.560 - CDS 26931 - 27551 733 ## COG1280 Putative threonine efflux protein 27 12 Op 2 5/0.440 - CDS 27615 - 29450 1898 ## COG0514 Superfamily II DNA helicase - Prom 29473 - 29532 4.5 - Term 29460 - 29493 4.5 28 13 Tu 1 . - CDS 29577 - 30446 926 ## COG2829 Outer membrane phospholipase A - Prom 30559 - 30618 4.3 + Prom 30523 - 30582 5.2 29 14 Op 1 1/0.920 + CDS 30611 - 31078 464 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 30 14 Op 2 . + CDS 31130 - 32017 1022 ## COG2962 Predicted permeases + Term 32025 - 32070 8.5 - Term 32015 - 32054 5.0 31 15 Tu 1 . - CDS 32064 - 32408 124 ## EC55989_4295 conserved hypothetical protein, putative membrane protein - Prom 32545 - 32604 12.5 + Prom 32487 - 32546 9.8 32 16 Tu 1 . + CDS 32686 - 32964 82 ## ECSP_4872 hypothetical protein - Term 32933 - 32980 5.5 33 17 Tu 1 . - CDS 32989 - 33165 237 ## COG0598 Mg2+ and Co2+ transporters - Prom 33293 - 33352 4.4 + Prom 33203 - 33262 5.4 34 18 Op 1 . + CDS 33322 - 34170 274 ## ECIAI1_4008 hypothetical protein 35 18 Op 2 . + CDS 34167 - 34646 159 ## ECIAI1_4007 hypothetical protein - Term 34653 - 34692 6.0 36 19 Tu 1 . - CDS 34700 - 35650 1237 ## COG0598 Mg2+ and Co2+ transporters 37 20 Tu 1 . + CDS 36020 - 36784 748 ## COG3698 Predicted periplasmic protein - Term 36893 - 36917 -1.0 38 21 Tu 1 5/0.440 - CDS 36931 - 39093 2320 ## COG0210 Superfamily I DNA and RNA helicases - Term 39104 - 39147 5.0 39 22 Op 1 8/0.080 - CDS 39177 - 39893 517 ## COG1011 Predicted hydrolase (HAD superfamily) 40 22 Op 2 10/0.040 - CDS 39893 - 40789 826 ## COG4973 Site-specific recombinase XerC 41 22 Op 3 4/0.560 - CDS 40786 - 41493 677 ## COG3159 Uncharacterized protein conserved in bacteria 42 22 Op 4 1/0.920 - CDS 41490 - 42314 779 ## COG0253 Diaminopimelate epimerase 43 22 Op 5 . - CDS 42351 - 42554 212 ## COG5567 Predicted small periplasmic lipoprotein - Prom 42661 - 42720 4.0 44 23 Tu 1 . + CDS 42904 - 43458 421 ## ECO103_4357 hypothetical protein + Prom 43709 - 43768 2.4 45 24 Op 1 . + CDS 43940 - 45304 909 ## ECSE_4090 hypothetical protein 46 24 Op 2 . + CDS 45301 - 46614 299 ## ECIAI1_3995 conserved hypothetical protein; putative exported protein 47 24 Op 3 . + CDS 46662 - 46982 569 ## COG1965 Protein implicated in iron transport, frataxin homolog 48 25 Tu 1 . - CDS 47022 - 49568 2393 ## COG3072 Adenylate cyclase - Prom 49722 - 49781 5.3 + Prom 49753 - 49812 3.8 49 26 Op 1 23/0.000 + CDS 49955 - 50896 984 ## COG0181 Porphobilinogen deaminase 50 26 Op 2 10/0.040 + CDS 50893 - 51633 497 ## COG1587 Uroporphyrinogen-III synthase 51 26 Op 3 11/0.040 + CDS 51655 - 52848 1359 ## COG2959 Uncharacterized enzyme of heme biosynthesis 52 26 Op 4 . + CDS 52851 - 54047 1367 ## COG3071 Uncharacterized enzyme of heme biosynthesis + Term 54058 - 54092 4.6 53 27 Tu 1 . - CDS 54971 - 56206 819 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Prom 56245 - 56304 3.2 - TRNA 56353 - 56429 92.7 # Pro TGG 0 0 - TRNA 56472 - 56558 69.1 # Leu CAG 0 0 - TRNA 56579 - 56654 84.9 # His GTG 0 0 - TRNA 56713 - 56789 89.5 # Arg CCG 0 0 54 28 Tu 1 . - CDS 56892 - 58277 1383 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 58378 - 58437 4.5 - Term 58413 - 58449 7.6 55 29 Op 1 . - CDS 58468 - 59208 863 ## COG1922 Teichoic acid biosynthesis proteins 56 29 Op 2 . - CDS 59211 - 60563 1354 ## ECH74115_5227 putative common antigen polymerase 57 29 Op 3 . - CDS 60560 - 61639 746 ## ECO111_4619 4-alpha-L-fucosyltransferase 58 29 Op 4 6/0.120 - CDS 61636 - 62886 1079 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 59 29 Op 5 4/0.560 - CDS 62888 - 64018 1267 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 60 29 Op 6 4/0.560 - CDS 64023 - 64697 412 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 61 29 Op 7 16/0.000 - CDS 64675 - 65556 946 ## COG1209 dTDP-glucose pyrophosphorylase 62 29 Op 8 4/0.560 - CDS 65575 - 66642 1198 ## COG1088 dTDP-D-glucose 4,6-dehydratase 63 29 Op 9 10/0.040 - CDS 66642 - 67904 1184 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 64 29 Op 10 4/0.560 - CDS 67901 - 69031 973 ## COG0381 UDP-N-acetylglucosamine 2-epimerase - Term 69039 - 69076 10.8 65 30 Op 1 5/0.440 - CDS 69087 - 70133 948 ## COG3765 Chain length determinant protein 66 30 Op 2 . - CDS 70145 - 71248 803 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 67 30 Op 3 . - CDS 71260 - 71478 143 ## ECO103_4381 hypothetical protein 68 30 Op 4 6/0.120 - CDS 71488 - 72747 1424 ## COG1158 Transcription termination factor - Prom 72929 - 72988 3.8 - Term 72988 - 73021 0.2 69 31 Tu 1 . - CDS 73074 - 73403 469 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 73514 - 73573 4.6 + Prom 73339 - 73398 2.4 70 32 Tu 1 . + CDS 73534 - 74799 1288 ## COG0513 Superfamily II DNA and RNA helicases 71 33 Tu 1 . + CDS 74933 - 76417 1611 ## COG0248 Exopolyphosphatase + Term 76427 - 76471 3.2 - Term 76362 - 76400 4.2 72 34 Tu 1 . - CDS 76464 - 78485 2048 ## COG0210 Superfamily I DNA and RNA helicases - Prom 78512 - 78571 3.2 + Prom 78479 - 78538 1.8 73 35 Tu 1 . + CDS 78702 - 79151 107 ## COG3692 Uncharacterized protein conserved in bacteria + Term 79225 - 79266 6.0 + Prom 79263 - 79322 4.8 74 36 Tu 1 . + CDS 79350 - 79631 273 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 79635 - 79675 10.6 - Term 79623 - 79661 10.2 75 37 Tu 1 . - CDS 79718 - 81193 2081 ## COG0059 Ketol-acid reductoisomerase - Prom 81247 - 81306 8.1 + Prom 81240 - 81299 4.4 76 38 Tu 1 . + CDS 81343 - 82236 749 ## COG0583 Transcriptional regulator + Term 82254 - 82291 6.1 - Term 82165 - 82195 1.0 77 39 Op 1 8/0.080 - CDS 82288 - 83832 1577 ## COG1171 Threonine dehydratase 78 39 Op 2 5/0.440 - CDS 83835 - 85685 2091 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 79 39 Op 3 5/0.440 - CDS 85750 - 86679 1123 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 80 39 Op 4 7/0.120 - CDS 86699 - 86962 239 ## COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit 81 39 Op 5 . - CDS 86959 - 88605 1393 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Prom 89079 - 89138 3.2 82 40 Tu 1 . + CDS 89195 - 90715 798 ## COG0606 Predicted ATPase with chaperone activity + Term 90964 - 90997 -0.2 83 41 Tu 1 . - CDS 90740 - 91078 438 ## COG3085 Uncharacterized protein conserved in bacteria - Prom 91157 - 91216 6.9 + Prom 91113 - 91172 6.1 84 42 Tu 1 . + CDS 91197 - 92036 658 ## COG0583 Transcriptional regulator + Term 92105 - 92138 3.1 - TRNA 92132 - 92207 82.1 # Trp CCA 0 0 - TRNA 92216 - 92292 90.7 # Asp GTC 0 0 - 5S_RRNA 92346 - 92476 99.0 # EU285519 [D:5957..6097] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. - LSU_RRNA 92557 - 92903 100.0 # CP000946 [R:4420328..4423307] # 23S ribosomal RNA # Escherichia coli ATCC 8739 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Predicted protein(s) >gi|299857045|gb|ADWS01000019.1| GENE 1 464 - 1009 486 181 aa, chain - ## HITS:1 COG:ECs4778 KEGG:ns NR:ns ## COG: ECs4778 COG4635 # Protein_GI_number: 15834032 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism # Function: Flavodoxin # Organism: Escherichia coli O157:H7 # 1 181 1 181 181 356 98.0 1e-98 MKTLILFSTRDGQTREIASYLASELKELGIQTDVANVHRIEEPQWENYDRVVIGASIRYG HYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTNSYARKFLMNSQWRPDHCA VIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTDWEQVANFAREIAHLTDKPTL K >gi|299857045|gb|ADWS01000019.1| GENE 2 1021 - 2472 1446 483 aa, chain - ## HITS:1 COG:ECs4777 KEGG:ns NR:ns ## COG: ECs4777 COG0168 # Protein_GI_number: 15834031 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Escherichia coli O157:H7 # 1 483 1 483 483 848 100.0 0 MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFFVALAIGSMLWWPNRKE KGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGL DSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAE TAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINT IIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFTLVVICTLVLWFHNVYSS ALMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRIL LLFKQGNRELKRLVHPNAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIATGV DDFSAFASVVATLNNLGPGLGVVADNFTSMNPVAKWILIANMLFGRLEVFTLLVLFTPTF WRE >gi|299857045|gb|ADWS01000019.1| GENE 3 2511 - 3053 526 180 aa, chain - ## HITS:1 COG:yigZ KEGG:ns NR:ns ## COG: yigZ COG1739 # Protein_GI_number: 16131694 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 180 26 205 205 325 99.0 3e-89 MLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPML AQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCE YSQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE >gi|299857045|gb|ADWS01000019.1| GENE 4 3125 - 4456 1659 443 aa, chain - ## HITS:1 COG:pepQ KEGG:ns NR:ns ## COG: pepQ COG0006 # Protein_GI_number: 16131693 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli K12 # 1 443 1 443 443 927 100.0 0 MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLDDHPYPFKVNPQFKAWV PVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTEDVEVIALPKADGIGSLLP AARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRSFKTEYELACMREAQKMAVNG HRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIVALNEHAAVLHYTKLDHQAPEEM RSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKDVNDEQLALIATMKAGVSYVDYHIQ FHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMPHGIGHPLGLQVHDVAGFMQDDSGTHL AAPAKYPYLRCTRILQPGMVLTIEPGIYFIESLLAPWREGQFSKHFNWQKIEALKPFGGI RIEDNVVIHENNVENMTRDLKLA >gi|299857045|gb|ADWS01000019.1| GENE 5 4646 - 6835 2746 729 aa, chain + ## HITS:1 COG:fadB_2 KEGG:ns NR:ns ## COG: fadB_2 COG1250 # Protein_GI_number: 16131692 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 307 729 1 423 423 839 99.0 0 MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSN KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAANGYALGGGCEC VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALK IGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMV AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVK GKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL NKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVRP DTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYL LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKP KKEEDAAVEDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVY GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPA RPVGDLKTA >gi|299857045|gb|ADWS01000019.1| GENE 6 6845 - 8008 1341 387 aa, chain + ## HITS:1 COG:ECs4773 KEGG:ns NR:ns ## COG: ECs4773 COG0183 # Protein_GI_number: 15834027 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli O157:H7 # 1 387 1 387 387 730 99.0 0 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQ TLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEH MGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAAT QSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLRPAFDPVSGTVTAGTSSA LSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSVS DIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM ERKDVQFGLATMCIGLGQGIATVFERV >gi|299857045|gb|ADWS01000019.1| GENE 7 8200 - 8901 727 233 aa, chain - ## HITS:1 COG:ECs4772 KEGG:ns NR:ns ## COG: ECs4772 COG0543 # Protein_GI_number: 15834026 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Escherichia coli O157:H7 # 1 233 1 233 233 480 100.0 1e-136 MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDERDKRPFSMASTPDEKGF IELHIGASEINLYAKAVMDRILKDHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARS ILLTALARNPNRDITIYWGGREEQHLYDLCELEALSLKHPGLQVVPVVEQPEAGWRGRTG TVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSERNAREDRLFGDAFAFI >gi|299857045|gb|ADWS01000019.1| GENE 8 8947 - 10440 1566 497 aa, chain - ## HITS:1 COG:ubiD KEGG:ns NR:ns ## COG: ubiD COG0043 # Protein_GI_number: 16131689 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Escherichia coli K12 # 1 497 1 497 497 1036 100.0 0 MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSM PVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNM PTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLITWGLTVTRGPHKERQNLGIYR QQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLS EYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGYIEQGETAPEGPYGDHTGYYNEVDS FPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEG CSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTR MDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIKKDPDVVAH IDAIWDELAIFNNGKSA >gi|299857045|gb|ADWS01000019.1| GENE 9 10607 - 11095 381 162 aa, chain + ## HITS:1 COG:ECs4770 KEGG:ns NR:ns ## COG: ECs4770 COG0250 # Protein_GI_number: 15834024 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 330 100.0 9e-91 MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFD PEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPATPYPGDKVIITE GAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL >gi|299857045|gb|ADWS01000019.1| GENE 10 11092 - 11874 577 260 aa, chain - ## HITS:1 COG:ZtatD KEGG:ns NR:ns ## COG: ZtatD COG0084 # Protein_GI_number: 15804431 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli O157:H7 EDL933 # 1 260 5 264 264 534 99.0 1e-152 MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAG VHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADL NMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVARGIYIGITGWVCDE RRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGED AAWLAATTDANVKTLFGIAF >gi|299857045|gb|ADWS01000019.1| GENE 11 11916 - 12692 810 258 aa, chain - ## HITS:1 COG:ECs4768 KEGG:ns NR:ns ## COG: ECs4768 COG0805 # Protein_GI_number: 15834022 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 465 100.0 1e-131 MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMI ATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYI GMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCW MGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKG RNREEENDAEAESEKTEE >gi|299857045|gb|ADWS01000019.1| GENE 12 12695 - 13210 428 171 aa, chain - ## HITS:1 COG:ECs4767 KEGG:ns NR:ns ## COG: ECs4767 COG1826 # Protein_GI_number: 15834021 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Escherichia coli O157:H7 # 1 171 1 171 171 267 100.0 9e-72 MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQ DSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNE AAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKTAAPSPSSSDKP >gi|299857045|gb|ADWS01000019.1| GENE 13 13214 - 13483 200 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 79 3 81 83 81 51 1e-14 MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFT AKTIADKQADTNQEQAKTEDAKRHDKEQV >gi|299857045|gb|ADWS01000019.1| GENE 14 13562 - 15202 1584 546 aa, chain - ## HITS:1 COG:ECs4765 KEGG:ns NR:ns ## COG: ECs4765 COG0661 # Protein_GI_number: 15834019 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Escherichia coli O157:H7 # 1 546 1 546 546 1109 100.0 0 MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLA LQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEA WFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRL LPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGM MVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEH PENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFE FAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLY PQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQH SVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFV GWRKTR >gi|299857045|gb|ADWS01000019.1| GENE 15 15199 - 15804 693 201 aa, chain - ## HITS:1 COG:yigP KEGG:ns NR:ns ## COG: yigP COG3165 # Protein_GI_number: 16131683 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 201 1 201 201 375 100.0 1e-104 MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGFSTSLILVFSERQVDVL GEWAGDADCTVIAYASVLPKLRDRQQLTALIRSGELEVQGDIQVVQNFVALADLAEFDPA ELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEAITEEWRMAPGPLEVAWFAEE TAAVERAVDALTKRLEKLEAK >gi|299857045|gb|ADWS01000019.1| GENE 16 15818 - 16573 363 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 28 250 1 221 221 144 34 2e-33 MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSG VRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYV QANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLS KAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTA GVVALHRGYKF >gi|299857045|gb|ADWS01000019.1| GENE 17 16668 - 18080 1546 470 aa, chain - ## HITS:1 COG:ECs4762 KEGG:ns NR:ns ## COG: ECs4762 COG1322 # Protein_GI_number: 15834016 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 470 6 475 475 804 99.0 0 MVYSVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR GLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR >gi|299857045|gb|ADWS01000019.1| GENE 18 18236 - 18997 977 253 aa, chain - ## HITS:1 COG:udp KEGG:ns NR:ns ## COG: udp COG2820 # Protein_GI_number: 16131680 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Escherichia coli K12 # 1 253 1 253 253 489 100.0 1e-138 MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKLASHREFTTWRAELDGK PVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGAS LHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSDTFYPGQERYDTYSGRVVRHF KGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKQTESH AVKIVVEAARRLL >gi|299857045|gb|ADWS01000019.1| GENE 19 19259 - 20074 798 271 aa, chain + ## HITS:1 COG:ECs4760 KEGG:ns NR:ns ## COG: ECs4760 COG0412 # Protein_GI_number: 15834014 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Escherichia coli O157:H7 # 1 271 23 293 293 546 98.0 1e-155 MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPAYHARPKQSDGPLPVVI VVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQV LADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLN SPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNA DYRPSYHAESAKDGWQRMLEWFKQYGGKKSL >gi|299857045|gb|ADWS01000019.1| GENE 20 20113 - 22374 2524 753 aa, chain - ## HITS:1 COG:metE KEGG:ns NR:ns ## COG: metE COG0620 # Protein_GI_number: 16131678 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Escherichia coli K12 # 1 753 1 753 753 1516 98.0 0 MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLTVGRELRARHWDQQKQAGIDLLP VGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFN TNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPVLLGPVTYLWLGKVKGEQFDR LSLLNDILPVYQQMLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQVKLLL TTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVVELHKRLPSDWLLSAGLINGRNVWRAD LSEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCHELALLR DALNSGDTAALAEWSAPIQARRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRAR FKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIRQAIVEQERLGLDVL VHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYA QSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDE PALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDAD VITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERL WVNPDCGLKTRGWPETRAALANMVQAAQNLRRG >gi|299857045|gb|ADWS01000019.1| GENE 21 22492 - 23445 706 317 aa, chain + ## HITS:1 COG:ECs4758 KEGG:ns NR:ns ## COG: ECs4758 COG0583 # Protein_GI_number: 15834012 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 613 99.0 1e-175 MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTP QGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQWLTPALENFHKNWPQVEM DFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFDYEVRLVLAPDHPLAAKTRIT PEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSVDNTLLLIQMVAARMGIAALPHW VVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQPITEAFIRSARNHACDHLPFVKSAE RPTYDAPTVRPGSPARL >gi|299857045|gb|ADWS01000019.1| GENE 22 23333 - 24232 1054 299 aa, chain - ## HITS:1 COG:ECs4757 KEGG:ns NR:ns ## COG: ECs4757 COG0697 # Protein_GI_number: 15834011 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 540 100.0 1e-153 MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFLPFLRTRGNSLKTVGLY MLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIYDIMSKRRLRWGYAFSALL AVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKRLMETRPMPQHNAFAWFYLGA FLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIGYFMWNYGATQVDAGTLGIMNNM HVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVHRKWVAPRSSQTADDRRRDCALSE >gi|299857045|gb|ADWS01000019.1| GENE 23 24308 - 25108 923 266 aa, chain - ## HITS:1 COG:Z5347 KEGG:ns NR:ns ## COG: Z5347 COG0561 # Protein_GI_number: 15804418 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 266 40 305 305 556 99.0 1e-158 MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKS YMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEE MRFFKEAVFKYALYEPGLLEPEGVSKVFFTCDSHEQLLPLEQAINARWGDRVNVSFSTLT CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGSAHQRLKD LHPELEVIGTNAEDAVPHYLRKLYLS >gi|299857045|gb|ADWS01000019.1| GENE 24 25116 - 26138 622 340 aa, chain - ## HITS:1 COG:ECs4755 KEGG:ns NR:ns ## COG: ECs4755 COG2267 # Protein_GI_number: 15834009 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Escherichia coli O157:H7 # 1 340 1 340 340 699 99.0 0 MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVRFVRFRAQHHDRVVVIC PGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADPHLGHVNRFNDYVDDLAAF WQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIALTAPMFGIVIRMPSFMARQI LNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRYRRNLRFYADDPTIRVGGPTYHW VRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNRMHDRFCELRTAAGHPVEGGRPLVI KGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSGNRSTEV >gi|299857045|gb|ADWS01000019.1| GENE 25 26249 - 26869 563 206 aa, chain + ## HITS:1 COG:ECs4754 KEGG:ns NR:ns ## COG: ECs4754 COG1280 # Protein_GI_number: 15834008 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 352 100.0 3e-97 MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVG LGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNL TNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPK QMKALNKIFGSLFMLVGALLASARHA >gi|299857045|gb|ADWS01000019.1| GENE 26 26931 - 27551 733 206 aa, chain - ## HITS:1 COG:ECs4753 KEGG:ns NR:ns ## COG: ECs4753 COG1280 # Protein_GI_number: 15834007 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 364 100.0 1e-101 MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGL HLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLL TNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGY QRLAKWIDGFAGALFAGFGIHLIISR >gi|299857045|gb|ADWS01000019.1| GENE 27 27615 - 29450 1898 611 aa, chain - ## HITS:1 COG:ECs4752 KEGG:ns NR:ns ## COG: ECs4752 COG0514 # Protein_GI_number: 15834006 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Escherichia coli O157:H7 # 1 611 1 611 611 1253 99.0 0 MNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQ IPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRL LYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFM ALTATADDTTRQDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKS GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGM GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG QLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQI ALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIH LGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAK LRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMAL IRAHVDGDDEE >gi|299857045|gb|ADWS01000019.1| GENE 28 29577 - 30446 926 289 aa, chain - ## HITS:1 COG:ECs4751 KEGG:ns NR:ns ## COG: ECs4751 COG2829 # Protein_GI_number: 15834005 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 572 100.0 1e-163 MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYL IYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQL SNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYT RLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGY GGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF >gi|299857045|gb|ADWS01000019.1| GENE 29 30611 - 31078 464 155 aa, chain + ## HITS:1 COG:ECs4750 KEGG:ns NR:ns ## COG: ECs4750 COG2050 # Protein_GI_number: 15834004 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli O157:H7 # 1 155 7 161 161 295 100.0 2e-80 MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAFKNQPMMVGNWAQSILH GGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGERFTAT SSLLRAGNKVAVARVELHNEEQLYIASATATYMVG >gi|299857045|gb|ADWS01000019.1| GENE 30 31130 - 32017 1022 295 aa, chain + ## HITS:1 COG:ECs4749 KEGG:ns NR:ns ## COG: ECs4749 COG2962 # Protein_GI_number: 15834003 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 509 99.0 1e-144 MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQW SYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF LGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGML IETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRKS >gi|299857045|gb|ADWS01000019.1| GENE 31 32064 - 32408 124 114 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4295 NR:ns ## KEGG: EC55989_4295 # Name: not_defined # Def: conserved hypothetical protein, putative membrane protein # Organism: E.coli_55989 # Pathway: not_defined # 1 114 1 114 114 182 100.0 4e-45 MYFYSINNILGNGFYMGNGNFWQLFLGKEPYSKKSDFVKAWLLWWAITILVLFILSLTTT LNLRSIGIGLSFGFCQILGRYTMSLGWSKYWGVLGVLPVTNIVLFLILIFFKKR >gi|299857045|gb|ADWS01000019.1| GENE 32 32686 - 32964 82 92 aa, chain + ## HITS:1 COG:no KEGG:ECSP_4872 NR:ns ## KEGG: ECSP_4872 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 92 37 128 128 145 97.0 5e-34 MNDINLALSFILVINNTYVNINIGAKRIRDTGCKAIYFVLISLGLTLFSIISAAIEGVRC ESLSVQLNVAWILFTTIILSAIPSAKMSLSAH >gi|299857045|gb|ADWS01000019.1| GENE 33 32989 - 33165 237 58 aa, chain - ## HITS:1 COG:STM3952 KEGG:ns NR:ns ## COG: STM3952 COG0598 # Protein_GI_number: 16767222 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Salmonella typhimurium LT2 # 9 58 267 316 316 104 92.0 5e-23 MLNLPIRKLFPTRIASSYGMNFEFMPELKWSFGYPGAIIFMILAGLTPYLYFKRKNWL >gi|299857045|gb|ADWS01000019.1| GENE 34 33322 - 34170 274 282 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_4008 NR:ns ## KEGG: ECIAI1_4008 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 282 3 284 284 549 99.0 1e-155 MNNILLPPINIPCTLFETISLFDDFSADDMQYGDMVEQDFLSLGLSDISAKVDPYRLIKY HFPGPGSINVAFSASSSGTKISQRECTDILFSEMKELAKMLSFFGQYKTLIEDLIEHFRY GNGSNFHSQQLNLSFHEKINKYGYNSPIRIIKECIENGINSTPSTGYQPLILQSIKTKLL SSRLNKFNDFEDSFNGLGISVHDISAQKISLLSFQKYAIGWSATIHFVAQDHFGLDVTDI KNKTYSKYRFFRIWFFLQRHKDFAFKPFFTNFNTIERIENYL >gi|299857045|gb|ADWS01000019.1| GENE 35 34167 - 34646 159 159 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_4007 NR:ns ## KEGG: ECIAI1_4007 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 159 1 159 159 316 100.0 2e-85 MKSKLQKIILCLFLLCCIYNLWTLRPVQILYTYSDAGNSVFLVVDHLPWTDSDKINWYLK HQNEIKNQHPLPEGSWHTWYVIDIGNGFTDYKKYIEGPYEDLYCFPTIKSNDNCIVKNYL MVINEYPYRNTHIGINDFTEYQLTQENKIERVFNPHDFK >gi|299857045|gb|ADWS01000019.1| GENE 36 34700 - 35650 1237 316 aa, chain - ## HITS:1 COG:ECs4746 KEGG:ns NR:ns ## COG: ECs4746 COG0598 # Protein_GI_number: 15834000 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 607 100.0 1e-174 MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQSELGQSLATRPELEDIE ASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLFTLRERELPAFRLYRMRAR SQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSRVIMEGHQGDEYDEALSTLAE LEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQAREILRDIESLLPHNESLFQKVNFL MQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSYGMNFEFMPELKWSFGYPGAIIFMI LAGLAPYLYFKRKNWL >gi|299857045|gb|ADWS01000019.1| GENE 37 36020 - 36784 748 254 aa, chain + ## HITS:1 COG:ECs4745 KEGG:ns NR:ns ## COG: ECs4745 COG3698 # Protein_GI_number: 15833999 # Func_class: S Function unknown # Function: Predicted periplasmic protein # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 520 100.0 1e-147 MAHRLLIGKGMITLNLKRIFLALTLLPLFAVAADDCALSDPTLTVQAYTVNPQTERVKMY WQKANGEAWGTLHALLADMNSQGQVQMAMNGGIYDESYAPLGLYIENGQQKVALNLASGE GNFFIRPGGVFYVAGDKVGIVRLDAFKTSKEIQFAVQSGPMLMENSVINPRIHPNVASRK IRNGVGINKHGNAVFLLSQQATNFYDFACYAKAKLNVEQLLYLDGTISHMYMKGGAIPWQ RYPFVTMISVERKG >gi|299857045|gb|ADWS01000019.1| GENE 38 36931 - 39093 2320 720 aa, chain - ## HITS:1 COG:uvrD KEGG:ns NR:ns ## COG: uvrD COG0210 # Protein_GI_number: 16131665 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli K12 # 1 720 1 720 720 1434 99.0 0 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY VGVTRAMQKLTLTYAETRRLYGKDVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV >gi|299857045|gb|ADWS01000019.1| GENE 39 39177 - 39893 517 238 aa, chain - ## HITS:1 COG:yigB KEGG:ns NR:ns ## COG: yigB COG1011 # Protein_GI_number: 16131664 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli K12 # 1 238 1 238 238 486 100.0 1e-137 MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHPALRSFQNEDLQRLRQA VREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHD TLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHGRSKPFSDMYFLAAEKLNVPI GEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI >gi|299857045|gb|ADWS01000019.1| GENE 40 39893 - 40789 826 298 aa, chain - ## HITS:1 COG:xerC KEGG:ns NR:ns ## COG: xerC COG4973 # Protein_GI_number: 16131663 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerC # Organism: Escherichia coli K12 # 1 298 1 298 298 587 99.0 1e-167 MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENGLQSWQQCDVTMVRNFA VRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVSAPKAPRHLPKNIDVDDMN RLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDINHLDLESGEVWVMGKGSKERRLP IGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPH KLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK >gi|299857045|gb|ADWS01000019.1| GENE 41 40786 - 41493 677 235 aa, chain - ## HITS:1 COG:yigA KEGG:ns NR:ns ## COG: yigA COG3159 # Protein_GI_number: 16131662 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 235 1 235 235 445 100.0 1e-125 MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA VGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV >gi|299857045|gb|ADWS01000019.1| GENE 42 41490 - 42314 779 274 aa, chain - ## HITS:1 COG:ECs4739 KEGG:ns NR:ns ## COG: ECs4739 COG0253 # Protein_GI_number: 15833993 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Escherichia coli O157:H7 # 1 274 2 275 275 568 100.0 1e-162 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL >gi|299857045|gb|ADWS01000019.1| GENE 43 42351 - 42554 212 67 aa, chain - ## HITS:1 COG:Z5325 KEGG:ns NR:ns ## COG: Z5325 COG5567 # Protein_GI_number: 15804397 # Func_class: N Cell motility # Function: Predicted small periplasmic lipoprotein # Organism: Escherichia coli O157:H7 EDL933 # 1 67 1 67 67 109 98.0 1e-24 MKNVFKALTVLITLFSLTGCGLKGPLYFPPADKNAPPPTKPVETQTQSTVPDKNDRATGD GPSQVNY >gi|299857045|gb|ADWS01000019.1| GENE 44 42904 - 43458 421 184 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4357 NR:ns ## KEGG: ECO103_4357 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 184 1 184 184 347 100.0 1e-94 MGLFTQLEKFDQKLTRGYARWGRWVWRTLIVVPVLVVLWNIGQAVWGGPRGGVILEIHSE IDRPILGFSVNGVAGANAFANGGGSTTCCGDVSGDTAEVIWTLSTTRTQYNAGMRLEKRN MTLPLPKREWGEDFLHVHFMPGDKVLLGWSKDSFSPYEDLHNGGYKTRVRQDVKDKLYGT GKMN >gi|299857045|gb|ADWS01000019.1| GENE 45 43940 - 45304 909 454 aa, chain + ## HITS:1 COG:no KEGG:ECSE_4090 NR:ns ## KEGG: ECSE_4090 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 454 49 502 502 920 99.0 0 MVYLRPYKETNLSLPDVNYKSLRRLPNLLIDPTTLDKWDKVPPLTDLTTDYLYEGAQAWY PHYSWHSDGRYILYAGEVVQNPPDKPPVDVASFKAWGDFAADKHSLYFEGKRTDNNGGGN RLDIKTLHQVEFRPPWDPDLLGLILRDANFLYINGHRLADPDSFRVLAQKSWDQRGKFST AFNPCVAMPFGPWDTLARTRTKILINGEQLDADPDTFSVVRWMPGSLLTWRDKNGLQRKV LDKENLAWDEDLTKHCLDFSLLEKKVFWRKGPACKQEELPGLDPEQFQPISDAVAQYQDS LYTIIETESGDRKLEIVKLDDPNLIINKRFNAGKRHGYLLTRAEGWPYHSGLHVFESDGP LILLDNRSPDEREAHLNDHPFLRRWYARDNRYIYSFDGAQLWRYRTADPKQVRLIWKEQH SGYGYGVNYKTGYLDGKITDDGEFIPAPRNEATK >gi|299857045|gb|ADWS01000019.1| GENE 46 45301 - 46614 299 437 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3995 NR:ns ## KEGG: ECIAI1_3995 # Name: not_defined # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 437 1 437 437 897 100.0 0 MKGQIITVALILLGHTFLTPAVQAIGFDYYNDHGVMSYGKGYWGDKKIIAQFPEMSRADL RLVKNISGKTGYIPSDEISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQAMGR FAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNSTTLVDSKNLYLSGRRQGSSSNVTV LEKRWWGINPRLMSVNRNLYSNDLLIRSGQNIYLNGVHLTANADSFEIIRWIPHSLLVFR DNKGMHRYPFGQLSGKAIPVDDDVSFEVGESRVRWRKQLTSDRQWSKWIDLPGIEPEQFH LITGNIAQYKDRLYVTKLSIFGEDQLEIIPLDTPDLVIDRSFNGGKQHAYFIRQLRSKSL QIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPSPCPAKTRVREENVREVQNRDIIIPV TDESCRNAAAEVQTLKP >gi|299857045|gb|ADWS01000019.1| GENE 47 46662 - 46982 569 106 aa, chain + ## HITS:1 COG:STM3943 KEGG:ns NR:ns ## COG: STM3943 COG1965 # Protein_GI_number: 16767214 # Func_class: P Inorganic ion transport and metabolism # Function: Protein implicated in iron transport, frataxin homolog # Organism: Salmonella typhimurium LT2 # 1 106 1 106 106 193 94.0 5e-50 MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQV WLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR >gi|299857045|gb|ADWS01000019.1| GENE 48 47022 - 49568 2393 848 aa, chain - ## HITS:1 COG:ECs4736 KEGG:ns NR:ns ## COG: ECs4736 COG3072 # Protein_GI_number: 15833990 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate cyclase # Organism: Escherichia coli O157:H7 # 1 848 1 848 848 1779 99.0 0 MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHYHHPLMPGYLDGNVPKG ICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMGSTSSVGQSCSSDLDIWVC HQSWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENRFRHNESGSLGGEDCGSTQHI LLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTLYAQGVLTPNEWLDLGGLSSLSA EEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYPNPRLLAKDIKQRLHDGEIVSFGLD PYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVCEKLSRERACVGWRRAVLSQLVSEWGW DEARLAMLDNRANWKIDQVREAHNELLDAMMQSYRNLIRFARRNNLSVSASPQDIGVLTR KLYAAFEALPGKVTLVNPQISPDLSEPNLTFIYVPPGRANRSGWYLYNRAPNIESIISHQ PLEYNRYLNKLVAWAWFNGLLTSRTRLYIKGNGIVDLPKLQEMVADVSHHFPLRLPAPTP KALYSPCEIRHLAIIVNLEYDPTAAFRNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRN SWNEVRTLHFNGEQSMIEALKTILGKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSE CIELRLSSTRQETGRFKALRVSGQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSV QVETNHVKLPAVVDGFASEGIIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELV RDVSRFYSSSHDRFTYGSSFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQDNDT PLLQQYFS >gi|299857045|gb|ADWS01000019.1| GENE 49 49955 - 50896 984 313 aa, chain + ## HITS:1 COG:ECs4735 KEGG:ns NR:ns ## COG: ECs4735 COG0181 # Protein_GI_number: 15833989 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Escherichia coli O157:H7 # 1 313 8 320 320 591 99.0 1e-169 MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKG LFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALP AGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLE SRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHKTALRVTAERAMNTRLEG GCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNGAR EILAEVYNGDAPA >gi|299857045|gb|ADWS01000019.1| GENE 50 50893 - 51633 497 246 aa, chain + ## HITS:1 COG:hemD KEGG:ns NR:ns ## COG: hemD COG1587 # Protein_GI_number: 16131656 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Escherichia coli K12 # 1 246 1 246 246 471 99.0 1e-133 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA LLRALQ >gi|299857045|gb|ADWS01000019.1| GENE 51 51655 - 52848 1359 397 aa, chain + ## HITS:1 COG:hemX KEGG:ns NR:ns ## COG: hemX COG2959 # Protein_GI_number: 16131655 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Escherichia coli K12 # 1 397 1 393 393 583 98.0 1e-166 MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAIAIALAAGVGLYGWGKQ QAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLKQANRQQETLAKQLDEVQQ KVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAALLKSADASLADMNDPSLITV RRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRLADNDSDGSPMDSDGEELSSSIS EWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQDIYLRENIRSRLLVAAQAVPRHQQE TYRQALENVSTWVRAYYDTDDATTKAFLDEVDQLSQQNISMDLPETLQSQAMLEKLMQTR VRNLLAQPAAGTTEAKPAPAPAPAPQGDTPAAAPQGE >gi|299857045|gb|ADWS01000019.1| GENE 52 52851 - 54047 1367 398 aa, chain + ## HITS:1 COG:ECs4732 KEGG:ns NR:ns ## COG: ECs4732 COG3071 # Protein_GI_number: 15833986 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Escherichia coli O157:H7 # 12 398 12 398 398 728 100.0 0 MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEW LLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVN YLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRVRLQLARNENHAARHGVDKLL EVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQAR ADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLL PIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPD AYDYAWLADALDRLHKPEEAAAMRRDGLMLTLQNNPPQ >gi|299857045|gb|ADWS01000019.1| GENE 53 54971 - 56206 819 411 aa, chain - ## HITS:1 COG:ECs4730 KEGG:ns NR:ns ## COG: ECs4730 COG0641 # Protein_GI_number: 15833984 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli O157:H7 # 1 411 1 411 411 873 98.0 0 MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTHMDDDTLEAYVRHYIAA SEPQNEVAFTWQGGEPTLLGLDFYRRAVKLQAKYGAGRKISNSFQTNGVLLDDKWCAFLA ENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQ PLQVYDFLCDAGVEFIQFIPVVERLADETAASDGLKLHAPGDIQGELTEWSVRPDEFGEF LVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHY VYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLD ASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASDIMQAHLLVVNK >gi|299857045|gb|ADWS01000019.1| GENE 54 56892 - 58277 1383 461 aa, chain - ## HITS:1 COG:ECs4729 KEGG:ns NR:ns ## COG: ECs4729 COG1113 # Protein_GI_number: 15833983 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 461 1 461 461 808 100.0 0 MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIM RSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFP EMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVIGLGVIFFGFGNGG QSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV LWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCN SGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVAGVAVSIAILLIGSCLNYIIPNPQRVF VYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRSILFPWANYVTMAFLICVLIG MYFNEDTRMSLFVGIIFMLAVTAIYKVFGLNRHGKAHKLEE >gi|299857045|gb|ADWS01000019.1| GENE 55 58468 - 59208 863 246 aa, chain - ## HITS:1 COG:wecG KEGG:ns NR:ns ## COG: wecG COG1922 # Protein_GI_number: 16131650 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Teichoic acid biosynthesis proteins # Organism: Escherichia coli K12 # 1 246 1 246 246 472 98.0 1e-133 MNNNTMAPTYTLRGLQLIGWRDMQHALDYLFADGHLKQGTLVAINAEKMLTIEDNAEVRE LINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMARAGKEGTPVFLVGGKPEV LAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASGAQIVTVAMGSPKQEIFMRDC RLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWLYRLLSQPSRIKRQLRLLRYLRW HYTGNL >gi|299857045|gb|ADWS01000019.1| GENE 56 59211 - 60563 1354 450 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_5227 NR:ns ## KEGG: ECH74115_5227 # Name: wzyE # Def: putative common antigen polymerase # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 450 1 450 450 749 100.0 0 MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSVLVFR FDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADVPRRPLFTMNRVETNLTWVIL MGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKRFFYFFIPAMLVVYFLRQDSK AWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVLGIVGM FWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYDNIDFQGLAPIVRDFYVF IPSWLWPGRPSMVLNSANYFTWEVLNNHSGLAISPTLIGSLVVMGGALFIPLGAIVVGLI IKWFDWLYELGNRETNRYKAAILHSFCFGAIFNMIVLAREGLDSFVSRVVFFIVVFGACL MIAKLLYWLFESAGLIHKRTKSSLRTQVEG >gi|299857045|gb|ADWS01000019.1| GENE 57 60560 - 61639 746 359 aa, chain - ## HITS:1 COG:no KEGG:ECO111_4619 NR:ns ## KEGG: ECO111_4619 # Name: rffT # Def: 4-alpha-L-fucosyltransferase # Organism: E.coli_O111_H- # Pathway: not_defined # 1 359 1 359 359 752 100.0 0 MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDDGLSDSCPALSVQFFPG KKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPSQFFWHIWGADLYELSSGL RYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGELLYFPTRMDPSLNTMANDRQR EGKMTILVGNSGDLSNEHVAALRAVHQQFGDTVKVVVPMGYPPNNEAYIEEVRQAGLELF SEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQGIGTLCLLIQAGIPCVLNRENPFWQ DMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKNTIAFFSPNYLQGWQRALAIAAGEGA >gi|299857045|gb|ADWS01000019.1| GENE 58 61636 - 62886 1079 416 aa, chain - ## HITS:1 COG:wzxE KEGG:ns NR:ns ## COG: wzxE COG2244 # Protein_GI_number: 16131648 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 1 416 1 416 416 696 99.0 0 MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFRQLITVLGVLAGAGIFN GVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAAAPISQGLFGNTDYQGLVR LVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGVLAYYVSYRLGGYEGALLGLA LIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLSKFTLMALITSVTLPVAYIMMRK LLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTEKRDITREVVKSLKFV LPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASL RFYILAEISQFTLLMVFAHWLIPAHGALGAAQAYMATYIVYFSLCCGVFLLWRRRA >gi|299857045|gb|ADWS01000019.1| GENE 59 62888 - 64018 1267 376 aa, chain - ## HITS:1 COG:wecE KEGG:ns NR:ns ## COG: wecE COG0399 # Protein_GI_number: 16131647 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 376 1 376 376 796 99.0 0 MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTASLE MAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRPDTMNIDETLIEAAITDKT RVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET KNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA AYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGRIELPSIPDGCVQNAHMFYIKLRDI DDRSALINFLKEAEIMAVFHYIPLHGCPAGERFGEFHGEDRYTTKESERLLRLPLFYNLS PVNQRTVIATLLNYFS >gi|299857045|gb|ADWS01000019.1| GENE 60 64023 - 64697 412 224 aa, chain - ## HITS:1 COG:ECs4723 KEGG:ns NR:ns ## COG: ECs4723 COG0454 # Protein_GI_number: 15833977 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 44 224 1 181 181 319 97.0 3e-87 MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDVLAPWSRVQAKIAASNTGELDALQ QLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASR RFYAQWIENAVRGTFDHQCLILRAASGGIRGYVSLRELNATDARIGLLAGRGVGAELMQT ALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVESTAYWLYR >gi|299857045|gb|ADWS01000019.1| GENE 61 64675 - 65556 946 293 aa, chain - ## HITS:1 COG:rffH KEGG:ns NR:ns ## COG: rffH COG1209 # Protein_GI_number: 16131645 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Escherichia coli K12 # 1 293 1 293 293 596 100.0 1e-170 MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGY FQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQGFSPKL RHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISLEEKPKQPKSNWAVTGLYFYDSKV VEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQTV EKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKTGYGQYLLELLRARPRQY >gi|299857045|gb|ADWS01000019.1| GENE 62 65575 - 66642 1198 355 aa, chain - ## HITS:1 COG:rffG KEGG:ns NR:ns ## COG: rffG COG1088 # Protein_GI_number: 16131644 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Escherichia coli K12 # 1 355 1 355 355 736 98.0 0 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSEHFAFEKVDI CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLT EDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL PTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVA TTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLR YAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQVQDGSYQGERLGLKG >gi|299857045|gb|ADWS01000019.1| GENE 63 66642 - 67904 1184 420 aa, chain - ## HITS:1 COG:ECs4720 KEGG:ns NR:ns ## COG: ECs4720 COG0677 # Protein_GI_number: 15833974 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 420 1 420 420 850 99.0 0 MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKT AVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILEST SPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPERVLPGQVMVELIKNDRVIGGM TPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPFWVI DQVKAAVADCLAATDKRASELKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVV EPNIHQLPKKLTGLCTLAQLDEALATADVLVMLVDHSQFKVINGDNVHQQYVVDAKGVWR >gi|299857045|gb|ADWS01000019.1| GENE 64 67901 - 69031 973 376 aa, chain - ## HITS:1 COG:ECs4719 KEGG:ns NR:ns ## COG: ECs4719 COG0381 # Protein_GI_number: 15833973 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Escherichia coli O157:H7 # 1 376 15 390 390 749 99.0 0 MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNI MQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGL RTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWV RDQVMSSDTLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQ IVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSL GKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLKDENEYQTMSRAHNPYGDGQ ACSRILEALKNNRISL >gi|299857045|gb|ADWS01000019.1| GENE 65 69087 - 70133 948 348 aa, chain - ## HITS:1 COG:ECs4718 KEGG:ns NR:ns ## COG: ECs4718 COG3765 # Protein_GI_number: 15833972 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli O157:H7 # 1 348 2 349 349 679 99.0 0 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSATAI TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA FASQRAASHLNEELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK >gi|299857045|gb|ADWS01000019.1| GENE 66 70145 - 71248 803 367 aa, chain - ## HITS:1 COG:ECs4717 KEGG:ns NR:ns ## COG: ECs4717 COG0472 # Protein_GI_number: 15833971 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 614 99.0 1e-176 MNLLTVSTDLISIFLFTTLFLFFARKVAKKVSLVDKPNFRKRHQGLIPLVGGISVYAGIC FTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRATIQAAVGIVMMVFGNLYLS SLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDGLLGGLSCVSFAAIGMILWFD GQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDAGSTLIGFTVIWILLETTQGKTH PISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPDRQHIHHLIMRAGFTSRQAFVLITL AAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLYGYCIKRAWKVARFIKRVKRRLRRNRG GSPNLTK >gi|299857045|gb|ADWS01000019.1| GENE 67 71260 - 71478 143 72 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4381 NR:ns ## KEGG: ECO103_4381 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 72 1 72 72 135 100.0 6e-31 MPKTPRVYVAFCFYICNLNAALAMLGKFLEFAGMLCNLHIKWLIFAQDWWVRNGLSLLNK GLRGYTSANNFL >gi|299857045|gb|ADWS01000019.1| GENE 68 71488 - 72747 1424 419 aa, chain - ## HITS:1 COG:ECs4716 KEGG:ns NR:ns ## COG: ECs4716 COG1158 # Protein_GI_number: 15833970 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Escherichia coli O157:H7 # 1 419 1 419 419 815 100.0 0 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKRS >gi|299857045|gb|ADWS01000019.1| GENE 69 73074 - 73403 469 109 aa, chain - ## HITS:1 COG:ECs4714 KEGG:ns NR:ns ## COG: ECs4714 COG0526 # Protein_GI_number: 15833968 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 109 19 127 127 221 100.0 2e-58 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLN IDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA >gi|299857045|gb|ADWS01000019.1| GENE 70 73534 - 74799 1288 421 aa, chain + ## HITS:1 COG:rhlB KEGG:ns NR:ns ## COG: rhlB COG0513 # Protein_GI_number: 16131636 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli K12 # 1 421 1 421 421 862 100.0 0 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS G >gi|299857045|gb|ADWS01000019.1| GENE 71 74933 - 76417 1611 494 aa, chain + ## HITS:1 COG:ECs4712 KEGG:ns NR:ns ## COG: ECs4712 COG0248 # Protein_GI_number: 15833966 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Escherichia coli O157:H7 # 1 494 1 494 494 959 99.0 0 MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAAGLNSENALSNEAMERG WQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQEILGCPVQVISGEEEARLI YQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSLSMGCVTWLERYFADRNLGQE NFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQALQEIMMAQGMDERITLEKLQQLK QRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIFTELNIQCMTLAGGALREGLVYGML HLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVAANFFDQVEKEWHLEAISRDLLISACQ LHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPAQKKLLATLLLNQTNPVDLSSLHQQNAVP PRVAEQLCRLLRLAIIFASRRRDDLVPEMTLQANHELLTLTLPQGWLTQHPLGKEIIAQE SQWQSYVHWPLEVH >gi|299857045|gb|ADWS01000019.1| GENE 72 76464 - 78485 2048 673 aa, chain - ## HITS:1 COG:rep KEGG:ns NR:ns ## COG: rep COG0210 # Protein_GI_number: 16131634 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli K12 # 1 673 1 673 673 1321 99.0 0 MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAA REMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKEL TEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGERDRIFAHCYGLYDAHLKACNV LDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVV GDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEK RLFSELGYGTELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEK FLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKK LGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRLAEREPIAAVRDLIH GMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMM ERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGI TRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHL ANLKAMMAAKRGK >gi|299857045|gb|ADWS01000019.1| GENE 73 78702 - 79151 107 149 aa, chain + ## HITS:1 COG:yifNm KEGG:ns NR:ns ## COG: yifNm COG3692 # Protein_GI_number: 16132261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 149 15 163 163 280 95.0 5e-76 MAINFSPKVGEILECNFGNYPVSQNGQFSTKYYDGRIPPEMIKNRLVVVLNGKINGNACI VVPLSTTRDHDKLNRGMHVEIASNVNNGLQFFDQQIRWAKADLVQQVSRNRLNRARTYRG YLNQCLPHELVADIQRAVIKSINAISLIN >gi|299857045|gb|ADWS01000019.1| GENE 74 79350 - 79631 273 93 aa, chain + ## HITS:1 COG:ECs4709 KEGG:ns NR:ns ## COG: ECs4709 COG0760 # Protein_GI_number: 15833963 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli O157:H7 # 1 93 1 93 93 188 100.0 2e-48 MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVP AFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN >gi|299857045|gb|ADWS01000019.1| GENE 75 79718 - 81193 2081 491 aa, chain - ## HITS:1 COG:ilvC KEGG:ns NR:ns ## COG: ilvC COG0059 # Protein_GI_number: 16131632 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Escherichia coli K12 # 1 491 1 491 491 964 99.0 0 MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQDKKVVIVGCGAQGLNQGLNMRDSG LDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVVNLTPDKQHSDVVRTVQP LMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPE NDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKL VEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDRLSNPAKLRAYALSEQLKEIMAPLF QKHMDDIISGEFSSGMMADWANDDKKLLTWREETGKTAFETAPQYEGKIGEQEYFDKGVL MIAMVKAGVELAFETMVDSGIIEESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYG NYLFSYACVPLLKPFMAELQPGDLGKAIPEGAVDNAQLRDVNEAIRSHAIEQVGKKLRGY MTDMKRIAVAG >gi|299857045|gb|ADWS01000019.1| GENE 76 81343 - 82236 749 297 aa, chain + ## HITS:1 COG:ECs4707 KEGG:ns NR:ns ## COG: ECs4707 COG0583 # Protein_GI_number: 15833961 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 561 99.0 1e-160 MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVRDNRTVTLTEA GEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAAYSHLPPILDRFRAEHPSV EIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSMLENLAVVLIAPALPCPVRNQ VSAEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPMIYATVGGHEAMVSMVALGCGVA LLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCAQKKRLHEPLIEAFWRILPNHK >gi|299857045|gb|ADWS01000019.1| GENE 77 82288 - 83832 1577 514 aa, chain - ## HITS:1 COG:ECs4706 KEGG:ns NR:ns ## COG: ECs4706 COG1171 # Protein_GI_number: 15833960 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 1009 100.0 0 MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHS FKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDA VRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHL DRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAE GVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYI AQHNIRGERLAHILSGANVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLG GRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVR YMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTHWNISLFHYRSHGTDYGRVLAAFE LGDHEPDFETRLNELGYDCHDETNNPAFRFFLAG >gi|299857045|gb|ADWS01000019.1| GENE 78 83835 - 85685 2091 616 aa, chain - ## HITS:1 COG:ECs4705 KEGG:ns NR:ns ## COG: ECs4705 COG0129 # Protein_GI_number: 15833959 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli O157:H7 # 1 616 1 616 616 1211 99.0 0 MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLV AEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCIS NCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPKVSDSQ SDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIV ELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSD IDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQT LEQYDVMLTQDDAVKNMFRAGPAGIRTTQAFSQDCRWDSLDDDRANGCIRSLEHAYSKDG GLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRY EGPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGSIGL IEDGDLIAIDIPNRGIQLQVSDAELAARREAQEARGDKAWTPKNRERQVSFALRAYASLA TSADKGAVRDKSKLGG >gi|299857045|gb|ADWS01000019.1| GENE 79 85750 - 86679 1123 309 aa, chain - ## HITS:1 COG:ECs4704 KEGG:ns NR:ns ## COG: ECs4704 COG0115 # Protein_GI_number: 15833958 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 643 99.0 0 MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQR LHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDV IIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGY QEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIDVREQ VLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAFFGLFTGETEDK WGWLDQVNQ >gi|299857045|gb|ADWS01000019.1| GENE 80 86699 - 86962 239 87 aa, chain - ## HITS:1 COG:ECs4703 KEGG:ns NR:ns ## COG: ECs4703 COG3978 # Protein_GI_number: 15833957 # Func_class: S Function unknown # Function: Acetolactate synthase (isozyme II), small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 143 100.0 8e-35 MMQHQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQNINIELTVASPRSVDLL FSQLNKLVDVAHVAICQSTTTSQQIRA >gi|299857045|gb|ADWS01000019.1| GENE 81 86959 - 88605 1393 548 aa, chain - ## HITS:1 COG:ECs4702 KEGG:ns NR:ns ## COG: ECs4702 COG0028 # Protein_GI_number: 15833956 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 548 1 548 548 1106 99.0 0 MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAAMAAIGYARA TGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDVLGLSLA CTKHSFLVQSLEELPRIMAEAFDVASSGRPGPVLVDIPKDIQLASGDLEPWFTTVENEVT FPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLATTKMPATCTLKGLGAVEAD YPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDPAEM NKLRQAHVALQGDLNALLPALQQPLNINDWQLHCAQLRDEHAWRYDHPGDAIYAPLLLKQ LSDRKPADCVVTTDVGQHQMWAAQHIAHTRPENFITSSGLGTMGFGLPAAVGAQVARPND TVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQERYSETTLTD NPDFLMLASAFGIPGQHITRKDQVEAALDTMLNSDGPYLLHVSIDELENVWPLVPPGASN SEMLEKLS >gi|299857045|gb|ADWS01000019.1| GENE 82 89195 - 90715 798 506 aa, chain + ## HITS:1 COG:yifB KEGG:ns NR:ns ## COG: yifB COG0606 # Protein_GI_number: 16131625 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Escherichia coli K12 # 1 506 11 516 516 981 99.0 0 MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEY PAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVP GAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHLQAVCAFLEGKHALERPKPTD AVSRALQHDLSDVVGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFL DELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCT PEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKR QNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDII TRQHLQEAVSYRAIDRLLIHLQKLLT >gi|299857045|gb|ADWS01000019.1| GENE 83 90740 - 91078 438 112 aa, chain - ## HITS:1 COG:ECs4699 KEGG:ns NR:ns ## COG: ECs4699 COG3085 # Protein_GI_number: 15833953 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 208 100.0 2e-54 MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLF VAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD >gi|299857045|gb|ADWS01000019.1| GENE 84 91197 - 92036 658 279 aa, chain + ## HITS:1 COG:ECs4698 KEGG:ns NR:ns ## COG: ECs4698 COG0583 # Protein_GI_number: 15833952 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 279 1 279 279 536 100.0 1e-152 MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAA GEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTG LQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDL NYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLH TVVDSTTLSRPLYAIWLQNSDKNTLIRDLLKINVLDEVY Prediction of potential genes in microbial genomes Time: Sun May 15 22:20:42 2011 Seq name: gi|299857044|gb|ADWS01000020.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont19.1, whole genome shotgun sequence Length of sequence - 84805 bp Number of predicted genes - 78, with homology - 78 Number of transcription units - 40, operones - 22 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 150 - 180 3.0 1 1 Tu 1 . - CDS 355 - 2745 2611 ## COG4993 Glucose dehydrogenase - Prom 2782 - 2841 3.7 + Prom 2753 - 2812 6.4 2 2 Tu 1 . + CDS 2951 - 3487 854 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase + Term 3496 - 3534 4.2 3 3 Tu 1 . - CDS 3528 - 4190 628 ## COG0288 Carbonic anhydrase - Prom 4286 - 4345 5.4 + Prom 4201 - 4260 4.2 4 4 Op 1 45/0.000 + CDS 4299 - 5225 946 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 5 4 Op 2 3/0.846 + CDS 5222 - 5992 865 ## COG0842 ABC-type multidrug transport system, permease component + Term 6000 - 6039 6.6 6 5 Op 1 4/0.615 + CDS 6097 - 6537 284 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA + Term 6551 - 6590 2.8 7 5 Op 2 . + CDS 6601 - 7830 896 ## COG0726 Predicted xylanase/chitin deacetylase + Term 7844 - 7881 2.1 8 6 Tu 1 . - CDS 7834 - 8214 455 ## COG0853 Aspartate 1-decarboxylase - Prom 8274 - 8333 2.7 9 7 Op 1 . + CDS 8164 - 8367 77 ## ECH74115_0140 hypothetical protein 10 7 Op 2 . + CDS 8431 - 9390 709 ## COG5464 Uncharacterized conserved protein + Term 9392 - 9436 2.1 - Term 9417 - 9459 10.2 11 8 Op 1 19/0.000 - CDS 9464 - 10315 972 ## COG0414 Panthothenate synthetase 12 8 Op 2 3/0.846 - CDS 10327 - 11121 899 ## COG0413 Ketopantoate hydroxymethyltransferase - Prom 11149 - 11208 4.4 - Term 11184 - 11229 7.1 13 9 Op 1 . - CDS 11234 - 12508 286 ## COG3539 P pilus assembly protein, pilin FimA 14 9 Op 2 . - CDS 12561 - 13157 249 ## SSON_0145 putative fimbrial protein 15 9 Op 3 . - CDS 13184 - 13786 380 ## B21_00135 hypothetical protein 16 9 Op 4 6/0.154 - CDS 13801 - 14184 222 ## COG3539 P pilus assembly protein, pilin FimA - Prom 14312 - 14371 3.6 - Term 14298 - 14336 -0.9 17 10 Op 1 10/0.000 - CDS 14387 - 16987 1557 ## COG3188 P pilus assembly protein, porin PapC 18 10 Op 2 7/0.154 - CDS 17022 - 17714 446 ## COG3121 P pilus assembly protein, chaperone PapD - Prom 17751 - 17810 7.8 - Term 17779 - 17833 6.4 19 11 Tu 1 3/0.846 - CDS 17867 - 18415 392 ## COG3539 P pilus assembly protein, pilin FimA 20 12 Op 1 7/0.154 - CDS 18820 - 19299 203 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 21 12 Op 2 1/1.000 - CDS 19296 - 20660 1397 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 20685 - 20744 3.5 22 13 Op 1 3/0.846 - CDS 20753 - 21649 548 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Term 21655 - 21687 3.0 23 13 Op 2 6/0.154 - CDS 21716 - 22171 655 ## COG1734 DnaK suppressor protein - Prom 22225 - 22284 2.3 - Term 22249 - 22284 -0.1 24 14 Op 1 3/0.846 - CDS 22349 - 23053 373 ## COG1489 DNA-binding protein, stimulates sugar fermentation 25 14 Op 2 . - CDS 23068 - 23598 485 ## COG1514 2'-5' RNA ligase - Prom 23620 - 23679 4.3 26 15 Tu 1 . + CDS 23627 - 26101 1974 ## COG1643 HrpA-like helicases + Prom 26196 - 26255 1.7 27 16 Tu 1 . + CDS 26297 - 28831 2969 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Prom 28971 - 29030 6.2 28 17 Op 1 7/0.154 + CDS 29051 - 31294 2526 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 29 17 Op 2 14/0.000 + CDS 31345 - 32142 232 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 30 17 Op 3 33/0.000 + CDS 32142 - 33032 806 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 31 17 Op 4 . + CDS 33029 - 35011 1873 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component + Term 35064 - 35095 -0.1 - Term 35005 - 35039 8.3 32 18 Tu 1 . - CDS 35046 - 36326 1433 ## COG0001 Glutamate-1-semialdehyde aminotransferase - Prom 36435 - 36494 5.4 + Prom 36317 - 36376 3.8 33 19 Op 1 3/0.846 + CDS 36551 - 37972 1463 ## COG0038 Chloride channel protein EriC 34 19 Op 2 . + CDS 38054 - 38398 469 ## COG0316 Uncharacterized conserved protein + Term 38410 - 38446 8.2 35 20 Tu 1 . - CDS 38445 - 38990 587 ## COG2860 Predicted membrane protein - Prom 39036 - 39095 2.5 36 21 Op 1 5/0.385 - CDS 39106 - 39906 765 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 37 21 Op 2 . - CDS 39899 - 40597 706 ## COG0775 Nucleoside phosphorylase - Prom 40698 - 40757 4.3 + Prom 40550 - 40609 2.0 38 22 Tu 1 . + CDS 40681 - 42198 1043 ## COG0232 dGTP triphosphohydrolase + Prom 42220 - 42279 2.7 39 23 Tu 1 . + CDS 42328 - 43752 1601 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 43763 - 43798 6.5 + Prom 43784 - 43843 3.0 40 24 Tu 1 . + CDS 43907 - 45064 1116 ## COG3835 Sugar diacid utilization regulator + Term 45176 - 45210 -0.5 41 25 Tu 1 . - CDS 45153 - 45539 447 ## ECIAI1_0162 hypothetical protein - Prom 45568 - 45627 3.6 - Term 45806 - 45846 10.6 42 26 Op 1 5/0.385 - CDS 45854 - 46678 1075 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase 43 26 Op 2 9/0.077 - CDS 46709 - 49381 2127 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase - Term 49406 - 49439 4.5 44 26 Op 3 . - CDS 49443 - 50237 830 ## COG0024 Methionine aminopeptidase - Prom 50353 - 50412 4.6 + Prom 50312 - 50371 3.5 45 27 Op 1 38/0.000 + CDS 50407 - 51330 1594 ## PROTEIN SUPPORTED gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 + Term 51505 - 51538 3.1 + Prom 51503 - 51562 3.8 46 27 Op 2 24/0.000 + CDS 51588 - 52439 1001 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 52450 - 52483 5.2 + Prom 52484 - 52543 4.9 47 27 Op 3 . + CDS 52586 - 53311 1037 ## COG0528 Uridylate kinase - Term 53328 - 53358 -0.7 48 28 Tu 1 . - CDS 53491 - 53688 56 ## ECIAI39_0174 hypothetical protein - Prom 53839 - 53898 2.1 + Prom 53467 - 53526 5.4 49 29 Op 1 8/0.154 + CDS 53603 - 54160 837 ## COG0233 Ribosome recycling factor + Prom 54170 - 54229 2.1 50 29 Op 2 7/0.154 + CDS 54252 - 55448 934 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase + Term 55553 - 55582 0.4 + Prom 55455 - 55514 3.9 51 30 Op 1 32/0.000 + CDS 55637 - 56395 515 ## COG0020 Undecaprenyl pyrophosphate synthase 52 30 Op 2 12/0.000 + CDS 56516 - 57265 609 ## COG0575 CDP-diglyceride synthetase 53 30 Op 3 18/0.000 + CDS 57277 - 58629 932 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 54 30 Op 4 17/0.000 + CDS 58659 - 61091 2542 ## COG4775 Outer membrane protein/protective antigen OMA87 + Prom 61101 - 61160 2.1 55 30 Op 5 15/0.000 + CDS 61213 - 61698 604 ## COG2825 Outer membrane protein 56 30 Op 6 18/0.000 + CDS 61702 - 62727 905 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase + Term 62754 - 62805 7.1 + Prom 62746 - 62805 4.0 57 31 Op 1 25/0.000 + CDS 62832 - 63287 466 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 58 31 Op 2 11/0.000 + CDS 63291 - 64079 766 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 59 31 Op 3 11/0.000 + CDS 64079 - 65227 1123 ## COG0763 Lipid A disaccharide synthetase 60 31 Op 4 6/0.154 + CDS 65224 - 65820 717 ## COG0164 Ribonuclease HII 61 31 Op 5 7/0.154 + CDS 65857 - 69339 3574 ## COG0587 DNA polymerase III, alpha subunit 62 31 Op 6 3/0.846 + CDS 69352 - 70311 1352 ## COG0825 Acetyl-CoA carboxylase alpha subunit + Term 70332 - 70361 1.2 + Prom 70330 - 70389 3.5 63 32 Op 1 1/1.000 + CDS 70410 - 72551 1943 ## COG1982 Arginine/lysine/ornithine decarboxylases 64 32 Op 2 2/0.923 + CDS 72608 - 72997 429 ## COG0346 Lactoylglutathione lyase and related lyases + Term 73017 - 73049 4.7 65 33 Tu 1 . + CDS 73062 - 74360 1094 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control + Term 74572 - 74630 1.3 - Term 74355 - 74399 6.6 66 34 Op 1 . - CDS 74409 - 74663 313 ## COG4568 Transcriptional antiterminator 67 34 Op 2 . - CDS 74656 - 74856 155 ## ECIAI39_0458 hypothetical protein - Prom 74928 - 74987 3.3 + Prom 74941 - 75000 1.8 68 35 Op 1 5/0.385 + CDS 75022 - 75567 737 ## COG4681 Uncharacterized protein conserved in bacteria 69 35 Op 2 4/0.615 + CDS 75564 - 75986 269 ## COG1186 Protein chain release factor B 70 35 Op 3 . + CDS 76000 - 76710 689 ## COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance + Term 76811 - 76852 3.3 - Term 76728 - 76766 -0.8 71 36 Tu 1 . - CDS 76865 - 77689 441 ## EcHS_A0197 hypothetical protein - Term 77697 - 77737 9.0 72 37 Tu 1 6/0.154 - CDS 77743 - 79461 2171 ## COG0442 Prolyl-tRNA synthetase - Term 79479 - 79509 2.7 73 38 Op 1 . - CDS 79572 - 80279 609 ## COG1720 Uncharacterized conserved protein 74 38 Op 2 . - CDS 80276 - 80680 363 ## EC55989_0194 outer membrane lipoprotein - Prom 80705 - 80764 2.5 - Term 80727 - 80763 6.7 75 39 Op 1 22/0.000 - CDS 80798 - 81613 1114 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 76 39 Op 2 32/0.000 - CDS 81653 - 82306 883 ## COG2011 ABC-type metal ion transport system, permease component 77 39 Op 3 . - CDS 82299 - 83330 1182 ## COG1135 ABC-type metal ion transport system, ATPase component + Prom 83292 - 83351 3.9 78 40 Tu 1 . + CDS 83518 - 84093 511 ## COG0241 Histidinol phosphatase and related phosphatases + SSU_RRNA 84457 - 84805 100.0 # AE014073 [R:3400189..3401730] # 16S ribosomal RNA # Shigella flexneri 2a str. 2457T # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella. Predicted protein(s) >gi|299857044|gb|ADWS01000020.1| GENE 1 355 - 2745 2611 796 aa, chain - ## HITS:1 COG:ECs0128 KEGG:ns NR:ns ## COG: ECs0128 COG4993 # Protein_GI_number: 15829382 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Escherichia coli O157:H7 # 1 796 1 796 796 1526 100.0 0 MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYPIAGLVMLGVAWMLWRS KRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGIWLILPFVWRRLVIPASGA VAALVVALLISGSILTWAGFNDPQEINGTLSADATPAEAISPVADQDWPAYGRNQEGQRF SPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFALD AASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILPVNDGRLI AINAENGKLCETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRE TSGVIRGFDVNTGELLWAFDPGAKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPM GVTTPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMDLPAQPTLADITV NGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTPTQPFSELSFRPT KDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPN REVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPF GLPCKQPAWGYISALDLKTNEVVWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAG NVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGT KMGDYIVAYALPDDVK >gi|299857044|gb|ADWS01000020.1| GENE 2 2951 - 3487 854 178 aa, chain + ## HITS:1 COG:ECs0129 KEGG:ns NR:ns ## COG: ECs0129 COG0634 # Protein_GI_number: 15829383 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 178 5 182 182 337 100.0 9e-93 MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSH EVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREP KSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIGKVILLDE >gi|299857044|gb|ADWS01000020.1| GENE 3 3528 - 4190 628 220 aa, chain - ## HITS:1 COG:yadF KEGG:ns NR:ns ## COG: yadF COG0288 # Protein_GI_number: 16128119 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli K12 # 1 220 1 220 220 457 100.0 1e-129 MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGEL FVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLINNWL LHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWA YGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHANHK >gi|299857044|gb|ADWS01000020.1| GENE 4 4299 - 5225 946 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 302 1 304 311 369 63 1e-101 MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSG RVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKY LKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLK DLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDLAPKS PLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLSEQGIQVLSMRNKANRLEELFVSLV NEKQGDRA >gi|299857044|gb|ADWS01000020.1| GENE 5 5222 - 5992 865 256 aa, chain + ## HITS:1 COG:ECs0132 KEGG:ns NR:ns ## COG: ECs0132 COG0842 # Protein_GI_number: 15829386 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 431 100.0 1e-121 MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQ FIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFV GILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTP LTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAF YLICWSLIQRGRGLRS >gi|299857044|gb|ADWS01000020.1| GENE 6 6097 - 6537 284 146 aa, chain + ## HITS:1 COG:yadI KEGG:ns NR:ns ## COG: yadI COG2893 # Protein_GI_number: 16128122 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli K12 # 1 146 1 146 146 301 99.0 3e-82 MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNMLSRMMCDALHEADSGEG VIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMACRETMTSSEFRERIVELG GPEVSSLWHQQQKNPPFVLKHNLYEY >gi|299857044|gb|ADWS01000020.1| GENE 7 6601 - 7830 896 409 aa, chain + ## HITS:1 COG:yadE KEGG:ns NR:ns ## COG: yadE COG0726 # Protein_GI_number: 16128123 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli K12 # 1 409 1 409 409 828 98.0 0 MYKQAVILLLMLFTASVSAALPARYMQTIENAAIWAQIGDKMVTVGNIRAGQIIAVEPTA ASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSAG SAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLTYHHILR DEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD GLKSVSRYAYPVLKQYGMKATAFVVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQS HTHFLHRVDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAA NDAGFHLAVTTMQGKVKPGDNPLLLKRLYILRTDSLETMSRLVSNQPQG >gi|299857044|gb|ADWS01000020.1| GENE 8 7834 - 8214 455 126 aa, chain - ## HITS:1 COG:ECs0135 KEGG:ns NR:ns ## COG: ECs0135 COG0853 # Protein_GI_number: 15829389 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Escherichia coli O157:H7 # 1 126 1 126 126 249 100.0 8e-67 MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAI AAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMKRTAKA IPVQVA >gi|299857044|gb|ADWS01000020.1| GENE 9 8164 - 8367 77 67 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_0140 NR:ns ## KEGG: ECH74115_0140 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 7 67 1 61 64 92 93.0 5e-18 MSHFHAVEFALQHRANHNFYLSTLSLTKQAMPALRKFSRSIARFLFSVYSSDGIYISSLR TVPKRAM >gi|299857044|gb|ADWS01000020.1| GENE 10 8431 - 9390 709 319 aa, chain + ## HITS:1 COG:yadD KEGG:ns NR:ns ## COG: yadD COG5464 # Protein_GI_number: 16128125 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 20 319 1 300 300 578 98.0 1e-165 MARLDWILPSRKTTRKAGKMDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDL NTLHLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAA MHRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITIT PDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHT EQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKGMSRED VAEMTNLSLAEIDKVINLI >gi|299857044|gb|ADWS01000020.1| GENE 11 9464 - 10315 972 283 aa, chain - ## HITS:1 COG:panC KEGG:ns NR:ns ## COG: panC COG0414 # Protein_GI_number: 16128126 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Escherichia coli K12 # 1 283 1 283 283 548 100.0 1e-156 MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEAKARADVVVVSIFVNPM QFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNGTETHTYVDVPGLSTMLEG ASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIRKMVADMGFDIEIVGVPIMRA KDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAGERDLDEIITIAGQELNEKGFRA DDIQIRDADTLLEVSETSKRAVILVAAWLGDARLIDNKMVELA >gi|299857044|gb|ADWS01000020.1| GENE 12 10327 - 11121 899 264 aa, chain - ## HITS:1 COG:ECs0138 KEGG:ns NR:ns ## COG: ECs0138 COG0413 # Protein_GI_number: 15829392 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 511 97.0 1e-145 MKPTTIASLQKCKQDKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPV TVEDIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLV ETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVL ECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAETGDI RAAVRQYMAEVESGVYPGEEHSFH >gi|299857044|gb|ADWS01000020.1| GENE 13 11234 - 12508 286 424 aa, chain - ## HITS:1 COG:yadC KEGG:ns NR:ns ## COG: yadC COG3539 # Protein_GI_number: 16128128 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 424 1 412 412 475 64.0 1e-134 MKKFFRHFLFLILCLSCYTASAGTDDNVGYIVGNSYGVGPSDQKWRETGPNGDATVIFRY ATSTNNLVFYKPTQLGPTGVKLQWSQLDTASGGGFLYCNRSDSTSGSAMRIENAMVDSGK MYGSHKLFNTSVPGLYYTLLISNMWSAYGTVTNVSSPGIYIGDSAEQYFSWYNPSEDVLY WSCNNANSTRKYWAVGGIYQTLTIEFYTDTNFDPTVTQQIKLSSSSNYLYSFKAYGAGQG INEHSYFIKIDFDLLNVKLTNPTCFTAMLSGTSVTGSTVKMGEYSAEQIRNGATPVPFDI SLQNCVRVTNIETKLVSTKVGTENGQLLGNTLTGNDAAKGVGVLIEGLATSKNPLMTLKP NDSNSVYKDYDPRGKDDTTGGVYPDQDTGITYPLHFQATLQQDGTIPIEAGEFKATSTFQ VTYP >gi|299857044|gb|ADWS01000020.1| GENE 14 12561 - 13157 249 198 aa, chain - ## HITS:1 COG:no KEGG:SSON_0145 NR:ns ## KEGG: SSON_0145 # Name: yadK # Def: putative fimbrial protein # Organism: S.sonnei # Pathway: not_defined # 1 198 1 198 198 387 99.0 1e-106 MHPTQRKLMKRIILFLSLQFPITYPAIAGQDIDLVANVKNSTCKSGISNQGNIDLGVVGV GYFSDNVTPESYQPGGKEFTVTVSDCALQGTGDVLNQLHIDFRALSGVMAAGSRQIFANE VATGAKNVGVVLFSIQDPTNIFNVISSAGNSRSVYTVMTSALHNSSWKFYARMQKIDPAL DVISGQVMSHILVDVYYE >gi|299857044|gb|ADWS01000020.1| GENE 15 13184 - 13786 380 200 aa, chain - ## HITS:1 COG:no KEGG:B21_00135 NR:ns ## KEGG: B21_00135 # Name: yadL # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 200 1 200 200 308 100.0 9e-83 MTFKNLRYGLSSSVVLAASLFSVPSYAATDSIGLTVITTVEIGTCTATLVNDSDQDISVV DFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRATCEGTANDGAGFANGSTA ADKASAVAVEVWSTETPATGSATQFSCVTPASQEVTISNAANAVVYYPMSARLVVEKNKT VSNVTAGKFSAPATFTVTYN >gi|299857044|gb|ADWS01000020.1| GENE 16 13801 - 14184 222 127 aa, chain - ## HITS:1 COG:yadM KEGG:ns NR:ns ## COG: yadM COG3539 # Protein_GI_number: 16128131 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 127 77 203 203 233 100.0 7e-62 MGLDKIANKTTESQADFKLVASGCSSGISWIDTTLTGNASSSSPKLIIPQSGDSSSTTSN IGMGFKKRTTDDATFLKPNSAEKIRWSTDEMQPDKGLEMTVALRETDAGQGVPGNFRALA TFNFIYQ >gi|299857044|gb|ADWS01000020.1| GENE 17 14387 - 16987 1557 866 aa, chain - ## HITS:1 COG:htrE KEGG:ns NR:ns ## COG: htrE COG3188 # Protein_GI_number: 16128132 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 866 1 865 865 1635 97.0 0 MTIKPTKNYHNHLTRIATFCALLYCNSAFCAELVEYDHTFLMGQNASNIDLSRYSEGNPA IPGMYDVSVYVNDQPIINQSITFIEIEGKKNAQACITLKNLLQFHINSPDINNEKAVLLA RDETLGNCLNLTEIIPQASVRYDVNEQRLDIDVPQAWVMKNYQNYVDPSLWENGINAAML SYNLNGYHSETPGRRNDSIYAAFNGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYIQRD IASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTI TQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVTVEESDGSKRTFSQPFSSVVQMLRPGV GRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTGYTGIQITDNNYTAGLLGLGLNTSV GAFSFDVTHSNVRIPDDKTYQGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDALT LIDEVKHPEQDLEPKSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQN RSNYSIGYSNSASWGSYSVSAQRSWNEDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSID TQMSSDFKGNNQLNVSSSGYSDNARVSYSVNTGYTMNKASKDLSYVGGYASYESPWGSLA GSVSANSDNSRQVSLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNST IDRWGYGVTSALSPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSA IMNITRSDGKNIPFAADIYDEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEESKPVSCL AHYQQSSEAEKIAQSIILNGIRCQIQ >gi|299857044|gb|ADWS01000020.1| GENE 18 17022 - 17714 446 230 aa, chain - ## HITS:1 COG:ecpD KEGG:ns NR:ns ## COG: ecpD COG3121 # Protein_GI_number: 16128133 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 230 17 246 246 444 98.0 1e-125 MAFSSSSIADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVP FTATPPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQL AFRTRIKLFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASG KRYPIDVKMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL >gi|299857044|gb|ADWS01000020.1| GENE 19 17867 - 18415 392 182 aa, chain - ## HITS:1 COG:yadN KEGG:ns NR:ns ## COG: yadN COG3539 # Protein_GI_number: 16128134 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 182 13 194 194 305 100.0 4e-83 MLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNKDGLILLQTATVGEIDAGVLNDT VGAKAKPFSITVDCSKANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINNPSDGVNIALHN IDGSTIKQVQINNPGDVYTKALDATTKSAVYDFKASYVRAVADQTATAGYVKTNTAYTIT YQ >gi|299857044|gb|ADWS01000020.1| GENE 20 18820 - 19299 203 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 4 139 122 255 278 82 38 5e-15 MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILAVSSFYRTPPLGPQDQPDYLNAAVA LETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMK NRGFMLWPLFEIAPELAFPDGETLREVLHTRAFDKLSKW >gi|299857044|gb|ADWS01000020.1| GENE 21 19296 - 20660 1397 454 aa, chain - ## HITS:1 COG:ECs0147 KEGG:ns NR:ns ## COG: ECs0147 COG0617 # Protein_GI_number: 15829401 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Escherichia coli O157:H7 # 1 454 1 454 454 862 100.0 0 MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD LLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNV SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGV IRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESL KLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMR VNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTR DIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAP PDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA >gi|299857044|gb|ADWS01000020.1| GENE 22 20753 - 21649 548 298 aa, chain - ## HITS:1 COG:yadB KEGG:ns NR:ns ## COG: yadB COG0008 # Protein_GI_number: 16128137 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 298 11 308 308 605 99.0 1e-173 MTDTQYIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETI LRQLEHYGLHWDGDVLWQSQRHHAYREALAWLHEQGLSYYCTCTRARIQSIGGIYDGHCR VLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLAREDFIIHRRDGLFAYNLAVVVDD HFQGVTEIVRGADLIEPTVRQISLYQLFGWKVPDYIHLPLALSPQGAKLSKQNHAPALPK GDPRPVLIAALQFLGQQAEAHWQDFSVEQILQSAVKNWRLTAVPESAIVNSTFSNASC >gi|299857044|gb|ADWS01000020.1| GENE 23 21716 - 22171 655 151 aa, chain - ## HITS:1 COG:ECs0149 KEGG:ns NR:ns ## COG: ECs0149 COG1734 # Protein_GI_number: 15829403 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Escherichia coli O157:H7 # 1 151 1 151 151 261 100.0 5e-70 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE IGIRRLEARPTADLCIDCKTLAEIREKQMAG >gi|299857044|gb|ADWS01000020.1| GENE 24 22349 - 23053 373 234 aa, chain - ## HITS:1 COG:ECs0150 KEGG:ns NR:ns ## COG: ECs0150 COG1489 # Protein_GI_number: 15829404 # Func_class: R General function prediction only # Function: DNA-binding protein, stimulates sugar fermentation # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 464 99.0 1e-131 MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTK RKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRI DFMLQADSRPDCYIEVKSVTYAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAV LHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL >gi|299857044|gb|ADWS01000020.1| GENE 25 23068 - 23598 485 176 aa, chain - ## HITS:1 COG:ligT KEGG:ns NR:ns ## COG: ligT COG1514 # Protein_GI_number: 16128140 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 2'-5' RNA ligase # Organism: Escherichia coli K12 # 1 176 4 179 179 336 100.0 1e-92 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ >gi|299857044|gb|ADWS01000020.1| GENE 26 23627 - 26101 1974 824 aa, chain + ## HITS:1 COG:ECs0152 KEGG:ns NR:ns ## COG: ECs0152 COG1643 # Protein_GI_number: 15829406 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Escherichia coli O157:H7 # 1 824 1 824 824 1481 98.0 0 MLQCGAKNVNPLERFVSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHP GINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLT RMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQ QMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEI QRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIR LVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGICLHLIAKEQAERAA AQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPTVNLLAAKRLLQMLGALEGERLS AQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMGNSDLGVAFSRNQPAW QQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDGRYQLANGMGAMLDADDA LSRHEWLIAPLLLQGSASPDARILLALPVDIDELVQRCPQLVQQSDTVEWDDAQGTLKAW RRLQIGQLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVLNWTAEAEQLRLRLLCAGKWLP EYDWPAVDDESLLAALETWLLPHMTGVHSLRGLKSLDIYQALRGLLDWGMQQRLDSELPA HYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATNPTIAQGRVPLVLELLSPAQRPLQIT RDLSAFWKGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS >gi|299857044|gb|ADWS01000020.1| GENE 27 26297 - 28831 2969 844 aa, chain + ## HITS:1 COG:ECs0153 KEGG:ns NR:ns ## COG: ECs0153 COG0744 # Protein_GI_number: 15829407 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Escherichia coli O157:H7 # 1 844 1 844 844 1521 100.0 0 MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEEPMPRKGKGKGKGRKPR GKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTIS KNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHL ATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEH DGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDAR YSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIY NPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPRGGVISPQPAFMQLVRQ ELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRF SGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIAL RQPNGQVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPK DQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAER AVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTI TWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGM RVLPVWTSDPQSLCQQSEMQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDM FGSN >gi|299857044|gb|ADWS01000020.1| GENE 28 29051 - 31294 2526 747 aa, chain + ## HITS:1 COG:ECs0154 KEGG:ns NR:ns ## COG: ECs0154 COG1629 # Protein_GI_number: 15829408 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 1 747 1 747 747 1461 99.0 0 MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAAT IAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTY DHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGG LLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKG SEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFN EGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSK QCAALAPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDI NAWFGYDDSVPLLNLYNPVNTDFDFNAKDPANSGPYRILNKQKQTGVYVQDQAQWDKVLV TLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVG KDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRA RGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPL SGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDRE YVASCFNTYGCFWGAERQVVATATFRF >gi|299857044|gb|ADWS01000020.1| GENE 29 31345 - 32142 232 265 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 9 235 274 507 563 94 29 2e-18 MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRH QPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRF GAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDI AHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGET LEMIYGIPMGILPHPAGAAPVSFVY >gi|299857044|gb|ADWS01000020.1| GENE 30 32142 - 33032 806 296 aa, chain + ## HITS:1 COG:fhuD KEGG:ns NR:ns ## COG: fhuD COG0614 # Protein_GI_number: 16128145 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 296 1 296 296 578 98.0 1e-165 MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWLPVELLLALGIVPYGVA DTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSSEMLARIAPGR GFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYEDFILSMKPRFVKRGARPLLLT TLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFDH DNSKDMDALMATPLWQAMPFVRTGRFQRVPAVWFYGATLSAMHFVRVLDNAIGGKA >gi|299857044|gb|ADWS01000020.1| GENE 31 33029 - 35011 1873 660 aa, chain + ## HITS:1 COG:fhuB KEGG:ns NR:ns ## COG: fhuB COG0609 # Protein_GI_number: 16128146 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli K12 # 1 660 1 660 660 967 99.0 0 MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSPDIDVIEQMIFHYSLLP RLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGITVTTLWAIPGAMASQFA ALVGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAINQLLVIFHHDQLQSMFLWST GTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALSLA IVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWLSDQIILWLTR VWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDMKVNDRVAAERQHVLAFALAGGVLLLM AVVVALSFGRDAHGWTWASGALLEDLMPWRWPRIMAALFAGVMLAVAGCIIQRLTGNPMA SPEVLGISSGAAFGVVLMLFLVPGNAFGWLLPAGSLGAAVTLLIIMIAAGRGGFSPHRML LAGMALSTAFTMLLMMLQASGDPRMAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPL CRRWLTILPLGGDTARAVGMALTPTRIALLLLAACLTATATMTIGPLSFVGLMAPHIARM MGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR >gi|299857044|gb|ADWS01000020.1| GENE 32 35046 - 36326 1433 426 aa, chain - ## HITS:1 COG:ECs0158 KEGG:ns NR:ns ## COG: ECs0158 COG0001 # Protein_GI_number: 15829412 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Escherichia coli O157:H7 # 1 426 1 426 426 848 99.0 0 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWG PMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATM SAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKHTLTCT YNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPEFLPGLRALCDEFGALLIIDEVM TGFRVALAGAQDYYGVEPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSG NPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAEEAGIPLVVNHVGGMFGIFFT DAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAFEAGFMSVAHSMEDINNTIDAAR RVFAKL >gi|299857044|gb|ADWS01000020.1| GENE 33 36551 - 37972 1463 473 aa, chain + ## HITS:1 COG:yadQ KEGG:ns NR:ns ## COG: yadQ COG0038 # Protein_GI_number: 16128148 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Escherichia coli K12 # 1 473 1 473 473 789 100.0 0 MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGTLVGLAAVAFDKGVAWL QNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQR PVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLAT GAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALID VGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGG LCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPM LALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQ LILPMIITGLGATLLAQFTGGKPLYSAILARTLAKQEAEQLARSKAASASENT >gi|299857044|gb|ADWS01000020.1| GENE 34 38054 - 38398 469 114 aa, chain + ## HITS:1 COG:STM0204 KEGG:ns NR:ns ## COG: STM0204 COG0316 # Protein_GI_number: 16763594 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 114 16 129 129 221 99.0 4e-58 MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDM TIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI >gi|299857044|gb|ADWS01000020.1| GENE 35 38445 - 38990 587 181 aa, chain - ## HITS:1 COG:yadS KEGG:ns NR:ns ## COG: yadS COG2860 # Protein_GI_number: 16128150 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 181 27 207 207 296 100.0 1e-80 MDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLP KWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILR TEIYATACIIGGIVHATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENG R >gi|299857044|gb|ADWS01000020.1| GENE 36 39106 - 39906 765 266 aa, chain - ## HITS:1 COG:yadT KEGG:ns NR:ns ## COG: yadT COG0614 # Protein_GI_number: 16128151 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 266 1 266 266 479 99.0 1e-135 MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKI EQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALR QLAPWSPQPDKAEQAAQSLQDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVL EVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLT SDWFERASPRIILAAQQLCNALSQVD >gi|299857044|gb|ADWS01000020.1| GENE 37 39899 - 40597 706 232 aa, chain - ## HITS:1 COG:STM0207 KEGG:ns NR:ns ## COG: STM0207 COG0775 # Protein_GI_number: 16763597 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Salmonella typhimurium LT2 # 1 232 1 232 232 412 96.0 1e-115 MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGAT LLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFK ADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAH VCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG >gi|299857044|gb|ADWS01000020.1| GENE 38 40681 - 42198 1043 505 aa, chain + ## HITS:1 COG:dgt KEGG:ns NR:ns ## COG: dgt COG0232 # Protein_GI_number: 16128153 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Escherichia coli K12 # 1 505 1 505 505 1011 99.0 0 MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERN AAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDELTGPFESIVEMSCLMHDIG NPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAALRLRDGEEPLNELRRKIRQDL CHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWWRGETPETHHYLMKKPGYYLSEE AYIARLRKELNLALYSRFPLTWIMEAADDISYCVADLEDAVEKRIFTVEQLYHHLHEAWG QHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFMYLRVNTLNKLVPYAAQRFIDNLPAIF AGTFNHALLEDASECSDLLKLYKNVAVKHVFSHPDVEQLELQGYRVISGLLEIYRPLLSL SLSDFTELVEKERVKRFPIESRLFHKLSTRHRLAYVEAVSKLPSDSPEFPLWEYYYRCRL LQDYISGMTDLYAWDEYRRLMAVEQ >gi|299857044|gb|ADWS01000020.1| GENE 39 42328 - 43752 1601 474 aa, chain + ## HITS:1 COG:ECs0165 KEGG:ns NR:ns ## COG: ECs0165 COG0265 # Protein_GI_number: 15829419 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli O157:H7 # 1 474 1 474 474 780 100.0 0 MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPMLEKVMPSVVSINVEGS TTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIID ADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMAD SDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGAL VNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNS ELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVG SKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGT PAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ >gi|299857044|gb|ADWS01000020.1| GENE 40 43907 - 45064 1116 385 aa, chain + ## HITS:1 COG:yaeG KEGG:ns NR:ns ## COG: yaeG COG3835 # Protein_GI_number: 16128155 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sugar diacid utilization regulator # Organism: Escherichia coli K12 # 1 385 7 391 391 733 99.0 0 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG DWQANELARPLARLKAMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE LTGLDLGNFDDRLLLYVALQLDEER >gi|299857044|gb|ADWS01000020.1| GENE 41 45153 - 45539 447 128 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0162 NR:ns ## KEGG: ECIAI1_0162 # Name: yaeH # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 128 1 128 128 218 100.0 6e-56 MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVAD GVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEA DLEKLTRK >gi|299857044|gb|ADWS01000020.1| GENE 42 45854 - 46678 1075 274 aa, chain - ## HITS:1 COG:dapD KEGG:ns NR:ns ## COG: dapD COG2171 # Protein_GI_number: 16128159 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Escherichia coli K12 # 1 274 1 274 274 521 100.0 1e-148 MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALRVAEKIDGQWVTHQWLK KAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEGFRVVPPAAVRQGAFIARN TVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIED NCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSVVVSGNLPS KDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID >gi|299857044|gb|ADWS01000020.1| GENE 43 46709 - 49381 2127 890 aa, chain - ## HITS:1 COG:glnD KEGG:ns NR:ns ## COG: glnD COG2844 # Protein_GI_number: 16128160 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Escherichia coli K12 # 1 890 1 890 890 1785 99.0 0 MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQRWLGDAFDNGISAEQL IEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHPLSDIDLLILSRKKLPDDQ AQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVATNLIESRLLIGDVALFLELQK HIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPDIKSSPGGLRDIHTLQWVARRHF GATSLDEMVGFGFLTSAERAELNECLHILWRIRFALHLVVSRYDNRLLFDRQLSVAQRLN YSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLFDEAILALPADEKPRPIDDEFQLRGTL IDLRDETLFMRQPEAILRMFYTMVRNSAITGIYSTTLRQLRHARRHLQQPLCNIPEARKL FLSILRHPGAVRRGLLPMHRHSVLGAYMPQWSHIVGQMQFDLFHAYTVDEHTIRVMLKLE SFASEETRQRHPLCVDVWPRLPSTELIFIAALFHDIAKGRGGDHSILGAQDVVHFAELHG LNSRETQLVAWLVRQHLLMSVTAQRRDIQDPEVIKQFAEEVQTENRLRYLVCLTVADICA TNETLWNSWKQSLLRELYFATEKQLRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEAL HQIWSRCRANYFVRHSPNQLAWHARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYL FAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQ SSWQPPQPRRQPAKLRHFTVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGI SLHGARITTIGERVEDLFIIATADRRALNNELQQEVHQRLTEALNPNDKG >gi|299857044|gb|ADWS01000020.1| GENE 44 49443 - 50237 830 264 aa, chain - ## HITS:1 COG:ECs0170 KEGG:ns NR:ns ## COG: ECs0170 COG0024 # Protein_GI_number: 15829424 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 537 100.0 1e-153 MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACL GYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTI MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEE PQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVV TDNGCEILTLRKDDTIPAIISHDE >gi|299857044|gb|ADWS01000020.1| GENE 45 50407 - 51330 1594 307 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 [Escherichia coli CFT073] # 1 307 1 307 307 618 99 1e-176 MVSMTYLWYKARRTSDPFRIHRLDGSDNLTLCNNTHVSAHIPGCPLGSVIWDTWRHNPNF YIEVLIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEAL AELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRL KDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIK EANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAE ESFVEAE >gi|299857044|gb|ADWS01000020.1| GENE 46 51588 - 52439 1001 283 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 280 1 279 283 390 71 1e-107 MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADG VIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKAQFEEERV ALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKGADEELVKHIAMHVAASKPEF IKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMEPSK TVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEVAAMSKQS >gi|299857044|gb|ADWS01000020.1| GENE 47 52586 - 53311 1037 241 aa, chain + ## HITS:1 COG:ECs0173 KEGG:ns NR:ns ## COG: ECs0173 COG0528 # Protein_GI_number: 15829427 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Escherichia coli O157:H7 # 1 241 1 241 241 460 100.0 1e-130 MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNL FRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDSYSWA EAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPT ATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLIT E >gi|299857044|gb|ADWS01000020.1| GENE 48 53491 - 53688 56 65 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_0174 NR:ns ## KEGG: ECIAI39_0174 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 60 12 71 92 92 98.0 3e-18 MRILLIWVLNASTHLSMRTSASFLISLITLRILENLSQSDQTVTHSGSVLSIALIKHITG NRLDY >gi|299857044|gb|ADWS01000020.1| GENE 49 53603 - 54160 837 185 aa, chain + ## HITS:1 COG:ECs0174 KEGG:ns NR:ns ## COG: ECs0174 COG0233 # Protein_GI_number: 15829428 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 296 100.0 1e-80 MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVE DSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGE AEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEA ELMQF >gi|299857044|gb|ADWS01000020.1| GENE 50 54252 - 55448 934 398 aa, chain + ## HITS:1 COG:dxr KEGG:ns NR:ns ## COG: dxr COG0743 # Protein_GI_number: 16128166 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Escherichia coli K12 # 1 398 1 398 398 759 100.0 0 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEA SAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTI LLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVS ILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN ASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFC KLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALN LSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS >gi|299857044|gb|ADWS01000020.1| GENE 51 55637 - 56395 515 252 aa, chain + ## HITS:1 COG:ECs0176 KEGG:ns NR:ns ## COG: ECs0176 COG0020 # Protein_GI_number: 15829430 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Escherichia coli O157:H7 # 1 252 2 253 253 509 100.0 1e-144 MLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNG IEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQ ERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHV CMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRER RFGGTEPGDETA >gi|299857044|gb|ADWS01000020.1| GENE 52 56516 - 57265 609 249 aa, chain + ## HITS:1 COG:ECs0177 KEGG:ns NR:ns ## COG: ECs0177 COG0575 # Protein_GI_number: 15829431 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Escherichia coli O157:H7 # 1 249 1 249 249 418 100.0 1e-117 MLAAWEWGQLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWW IVALLLVLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLY VMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVA PVTLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC LLLLVFRTL >gi|299857044|gb|ADWS01000020.1| GENE 53 57277 - 58629 932 450 aa, chain + ## HITS:1 COG:ECs0178 KEGG:ns NR:ns ## COG: ECs0178 COG0750 # Protein_GI_number: 15829432 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 870 99.0 0 MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYV IALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAILAYWLVF IIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTI TVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAASKAGL QAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIG FVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKTWQLMKLTVSMLGKLITGDVKLNNLSG PISIAKGAGMTAELGVVYYLPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKIKGGPVS ERVQDFCYRIGSILLVLLMGLALFNDFSRL >gi|299857044|gb|ADWS01000020.1| GENE 54 58659 - 61091 2542 810 aa, chain + ## HITS:1 COG:ECs0179 KEGG:ns NR:ns ## COG: ECs0179 COG4775 # Protein_GI_number: 15829433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Escherichia coli O157:H7 # 1 810 1 810 810 1609 100.0 0 MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDIS NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQI NIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTK VTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTS KDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKE RNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQ PQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVT IPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTV RGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPL GPLVFSYAQPFKKYDGDKAEQFQFNIGKTW >gi|299857044|gb|ADWS01000020.1| GENE 55 61213 - 61698 604 161 aa, chain + ## HITS:1 COG:STM0225 KEGG:ns NR:ns ## COG: STM0225 COG2825 # Protein_GI_number: 16763615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 209 90.0 2e-54 MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSNTLENEFKGRASELQRM ETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFEQDRARRSNEERGKLVTRI QTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQVK >gi|299857044|gb|ADWS01000020.1| GENE 56 61702 - 62727 905 341 aa, chain + ## HITS:1 COG:lpxD KEGG:ns NR:ns ## COG: lpxD COG1044 # Protein_GI_number: 16128172 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Escherichia coli K12 # 1 341 1 341 341 650 100.0 0 MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVNPKYREHLGLCQASAVV MTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGA NAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGA DGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHN VVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGMVMRPITEPGV YSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLERKVNQQD >gi|299857044|gb|ADWS01000020.1| GENE 57 62832 - 63287 466 151 aa, chain + ## HITS:1 COG:ZfabZ KEGG:ns NR:ns ## COG: ZfabZ COG0764 # Protein_GI_number: 15799862 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 EDL933 # 1 151 1 151 151 295 100.0 2e-80 MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPI FPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKT RRGLTRFKGVALVDGKVVCEATMMCARSREA >gi|299857044|gb|ADWS01000020.1| GENE 58 63291 - 64079 766 262 aa, chain + ## HITS:1 COG:lpxA KEGG:ns NR:ns ## COG: lpxA COG1043 # Protein_GI_number: 16128174 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Escherichia coli K12 # 1 262 1 262 262 511 100.0 1e-145 MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDN EIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMIN AHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQD VPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLIYRSGKTLDEVKPEIAELA ETYPEVKAFTDFFARSTRGLIR >gi|299857044|gb|ADWS01000020.1| GENE 59 64079 - 65227 1123 382 aa, chain + ## HITS:1 COG:lpxB KEGG:ns NR:ns ## COG: lpxB COG0763 # Protein_GI_number: 16128175 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Escherichia coli K12 # 1 382 1 382 382 744 99.0 0 MTEQRPLTIALVAGETSGDILGAGLIRALKERVPNARFVGVAGPRMQAEGCEAWYEMEEL AVMGIVEVLGRLRRLLHIRADLTKRFGELKPDIFVGIDAPDFNITLEGNLKKQGIKTIHY VSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVPCRFIGHTMADAMPLDPDKNA ARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQLLRQTYPDLEIVVPLVNAKRREQ FERIKAEVAPDLSVHLLDGMGREAMVASDAALLASGTAALECMLAKCPMVVGYRMKPFTF WLAKRLVKTDYVSLPNLLAGRELVKELLQEECEPQKLAAALLPLLANGKTSHAMHDTFRE LHQQIRCNADEQAAQAVLELAQ >gi|299857044|gb|ADWS01000020.1| GENE 60 65224 - 65820 717 198 aa, chain + ## HITS:1 COG:rnhB KEGG:ns NR:ns ## COG: rnhB COG0164 # Protein_GI_number: 16128176 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Escherichia coli K12 # 1 198 1 198 198 369 99.0 1e-102 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAELHIAPEYVLIDGNRCPKLPMPAM AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT EHHRRSFGPVKRALGLAS >gi|299857044|gb|ADWS01000020.1| GENE 61 65857 - 69339 3574 1160 aa, chain + ## HITS:1 COG:ECs0186 KEGG:ns NR:ns ## COG: ECs0186 COG0587 # Protein_GI_number: 15829440 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Escherichia coli O157:H7 # 1 1160 1 1160 1160 2374 99.0 0 MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA GIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDW LIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEES YLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM RSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGL EERLAFLFPDEEERVKRRPEYDERLETELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM AKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG VGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLD DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD RLLNDLRGLIGSEQVELEFD >gi|299857044|gb|ADWS01000020.1| GENE 62 69352 - 70311 1352 319 aa, chain + ## HITS:1 COG:ECs0187 KEGG:ns NR:ns ## COG: ECs0187 COG0825 # Protein_GI_number: 15829441 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Escherichia coli O157:H7 # 1 319 1 319 319 619 100.0 1e-177 MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGA WQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQK GRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEA IARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKS ADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVL STEDLKNRRYQRLMSYGYA >gi|299857044|gb|ADWS01000020.1| GENE 63 70410 - 72551 1943 713 aa, chain + ## HITS:1 COG:ldcC KEGG:ns NR:ns ## COG: ldcC COG1982 # Protein_GI_number: 16128179 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli K12 # 1 713 1 713 713 1511 100.0 0 MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQY TDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLI DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVH AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIF ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNP GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDAD ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH DLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM PGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG >gi|299857044|gb|ADWS01000020.1| GENE 64 72608 - 72997 429 129 aa, chain + ## HITS:1 COG:ECs0189 KEGG:ns NR:ns ## COG: ECs0189 COG0346 # Protein_GI_number: 15829443 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Escherichia coli O157:H7 # 1 129 10 138 138 271 100.0 3e-73 MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFS FPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPD GLPLELYEQ >gi|299857044|gb|ADWS01000020.1| GENE 65 73062 - 74360 1094 432 aa, chain + ## HITS:1 COG:mesJ KEGG:ns NR:ns ## COG: mesJ COG0037 # Protein_GI_number: 16128181 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Escherichia coli K12 # 1 432 1 432 432 778 96.0 0 MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAW VTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQ CETFLLALKRGSGPAGLSAMGEVSEFAGTRLIRPLLARTRGELAQWALAHGLRWIEDESN QDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAEQESLLDELLADDLAHCQTSQGT LQIAPMLAMSDARRAAIIRRWLAGQNAPMPSRDALVRIWQEVALAREDASPCLRFGAFEI RRYQSQLWWINSVTGQSETIVPWQTWLQPLELPAGLGSVQLTAGGDIRPPRADEAVSVRF KAPGLLHIVGRNGGRKLKKIWQELGVPPWLRDTTPLLFYGETLIAAAGVFVTQEGVAEGE NGVSFVWQKTLS >gi|299857044|gb|ADWS01000020.1| GENE 66 74409 - 74663 313 84 aa, chain - ## HITS:1 COG:ECs0191 KEGG:ns NR:ns ## COG: ECs0191 COG4568 # Protein_GI_number: 15829445 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli O157:H7 # 1 84 3 86 86 155 100.0 1e-38 MNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDLVSRKNVEYLVVEAAGET RELRLDKITSFSHPEIGTVVVSES >gi|299857044|gb|ADWS01000020.1| GENE 67 74656 - 74856 155 66 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_0458 NR:ns ## KEGG: ECIAI39_0458 # Name: yaeP # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 66 1 66 66 107 100.0 1e-22 MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALSEAVREKAAYAAANLLV SDYVNE >gi|299857044|gb|ADWS01000020.1| GENE 68 75022 - 75567 737 181 aa, chain + ## HITS:1 COG:yaeQ KEGG:ns NR:ns ## COG: yaeQ COG4681 # Protein_GI_number: 16128183 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 181 1 181 181 330 99.0 7e-91 MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRG LCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVVLFTYNSRAAQIWWQQNQ SKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQP S >gi|299857044|gb|ADWS01000020.1| GENE 69 75564 - 75986 269 140 aa, chain + ## HITS:1 COG:yaeJ KEGG:ns NR:ns ## COG: yaeJ COG1186 # Protein_GI_number: 16128184 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Escherichia coli K12 # 1 140 1 140 140 208 97.0 2e-54 MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAAS HHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKARRPTRPTRASKERRLA SKAQKSSVKAMRGKVRSGRE >gi|299857044|gb|ADWS01000020.1| GENE 70 76000 - 76710 689 236 aa, chain + ## HITS:1 COG:ECs0194 KEGG:ns NR:ns ## COG: ECs0194 COG3015 # Protein_GI_number: 15829448 # Func_class: M Cell wall/membrane/envelope biogenesis; P Inorganic ion transport and metabolism # Function: Uncharacterized lipoprotein NlpE involved in copper resistance # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 466 99.0 1e-131 MVKKAIVTAMAVISLFTLMGCNNRAEVDALSPAQAAELKPMPQSWRGVLPCADCEGIETS LFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEML DREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELE RGYLAARGHSEKPMLLSVEGHFTLEANPDTGAPTKVLAPDTAGKFYPNQDCSSLGQ >gi|299857044|gb|ADWS01000020.1| GENE 71 76865 - 77689 441 274 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A0197 NR:ns ## KEGG: EcHS_A0197 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 274 1 274 274 526 100.0 1e-148 MDKPKAYCRLFLPSFLLLSACTVDISQPDPSATAVDAEAKTWAVKFQHQSSFTEQSIKEI TAPDLKPGDLLFSSSLGVTSFGIRVFSTSSVSHVAIFLGDNNVAEATGAGVQIVSLKKAM KHSDKLFVLRVPDLTPQQATDITAFANKIKDSGYNYRGIVEFIPFMVTRQMCSLNPFSED FRQQCVSGLAKAQLSSVGEGDKKSWFCSEFVTDAFAKAGHPLTLAQSGWISPADLMHMRI GDVSAFKPETQLQYVGHLKPGIYIKAGRFVGLTQ >gi|299857044|gb|ADWS01000020.1| GENE 72 77743 - 79461 2171 572 aa, chain - ## HITS:1 COG:ECs0196 KEGG:ns NR:ns ## COG: ECs0196 COG0442 # Protein_GI_number: 15829450 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 572 1 572 572 1133 99.0 0 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIA PKEPRAAAAQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPLVALLVRG DHELNEVKAEKLPQVASPLTFATEEEIRAVVKAGPGSLGPVNMPIPVVIDRTVAAMSDFA AGANIDGKHYFGINWDRDVATPEVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTK YSEALKASVQGEDGRNQILTMGCYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILP MNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLD NDDIEYKYRRNGEKQLIKTGDIVEYLVKQIKG >gi|299857044|gb|ADWS01000020.1| GENE 73 79572 - 80279 609 235 aa, chain - ## HITS:1 COG:ECs0197 KEGG:ns NR:ns ## COG: ECs0197 COG1720 # Protein_GI_number: 15829451 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 469 99.0 1e-132 MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWIL FVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILK LGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRY PQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR >gi|299857044|gb|ADWS01000020.1| GENE 74 80276 - 80680 363 134 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0194 NR:ns ## KEGG: EC55989_0194 # Name: rcsF # Def: outer membrane lipoprotein # Organism: E.coli_55989 # Pathway: Two-component system [PATH:eck02020] # 1 134 1 134 134 220 100.0 1e-56 MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVG KPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYR QAVCIGSALNITAK >gi|299857044|gb|ADWS01000020.1| GENE 75 80798 - 81613 1114 271 aa, chain - ## HITS:1 COG:yaeC KEGG:ns NR:ns ## COG: yaeC COG1464 # Protein_GI_number: 16128190 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 1 271 1 271 271 505 99.0 1e-143 MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLD VELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSKK IKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIV ELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVEDKDSPYVNLIVTREDNKDA ENVKKFVQAYQSDEVYEAANKVFNGGAVKGW >gi|299857044|gb|ADWS01000020.1| GENE 76 81653 - 82306 883 217 aa, chain - ## HITS:1 COG:yaeE KEGG:ns NR:ns ## COG: yaeE COG2011 # Protein_GI_number: 16128191 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Escherichia coli K12 # 1 217 1 217 217 310 100.0 9e-85 MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIV NIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLI EASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG YIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK >gi|299857044|gb|ADWS01000020.1| GENE 77 82299 - 83330 1182 343 aa, chain - ## HITS:1 COG:ECs0201 KEGG:ns NR:ns ## COG: ECs0201 COG1135 # Protein_GI_number: 15829455 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 343 1 343 343 677 100.0 0 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEG SVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRR VTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSIL ELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKF IQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQ MDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEVLGYV >gi|299857044|gb|ADWS01000020.1| GENE 78 83518 - 84093 511 191 aa, chain + ## HITS:1 COG:ECs0202 KEGG:ns NR:ns ## COG: ECs0202 COG0241 # Protein_GI_number: 15829456 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 395 100.0 1e-110 MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIAR GKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSA RDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLP QAIKKQQKPAQ Prediction of potential genes in microbial genomes Time: Sun May 15 22:21:25 2011 Seq name: gi|299857043|gb|ADWS01000021.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont20.1, whole genome shotgun sequence Length of sequence - 77760 bp Number of predicted genes - 107, with homology - 104 Number of transcription units - 40, operones - 26 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 154 - 582 139 ## SNSL254_p_0082 hypothetical protein - Prom 717 - 776 3.5 - Term 714 - 755 7.1 2 2 Op 1 . - CDS 783 - 1166 293 ## SNSL254_p_0078 type IV conjugative transfer system protein TraA 3 2 Op 2 . - CDS 1179 - 1676 203 ## SNSL254_p_0077 type IV conjugative transfer system protein TraV 4 2 Op 3 . - CDS 1754 - 3070 574 ## SNSL254_p_0076 type IV conjugative transfer system protein TraB 5 2 Op 4 . - CDS 3067 - 3984 457 ## SNSL254_p_0075 hypothetical protein 6 2 Op 5 . - CDS 3968 - 4594 480 ## SNSL254_p_0074 type IV conjugative transfer system protein TraE 7 2 Op 6 . - CDS 4591 - 4872 123 ## SNSL254_p_0073 type IV conjugative transfer system protein TraL - Prom 4939 - 4998 2.0 - Term 4958 - 5001 6.3 8 3 Op 1 . - CDS 5016 - 5348 247 ## SNSL254_p_0072 hypothetical protein 9 3 Op 2 . - CDS 5393 - 5536 79 ## - Prom 5644 - 5703 1.8 - Term 5679 - 5714 2.3 10 4 Op 1 . - CDS 5717 - 6379 366 ## SNSL254_p_0071 hypothetical protein 11 4 Op 2 . - CDS 6379 - 6756 307 ## SNSL254_p_0070 hypothetical protein - Term 6907 - 6948 4.0 12 5 Op 1 . - CDS 6998 - 7174 67 ## gi|165938104|ref|ZP_02226664.1| hypothetical protein YPIP275_2874 13 5 Op 2 . - CDS 7222 - 7851 519 ## SNSL254_p_0068 putative type IV conjugative transfer system coupling factor 14 5 Op 3 . - CDS 7808 - 8353 321 ## SNSL254_p_0067 hypothetical protein 15 5 Op 4 . - CDS 8403 - 10268 861 ## SNSL254_p_0066 type IV conjugative transfer system protein TraD 16 5 Op 5 . - CDS 10265 - 13237 974 ## SNSL254_p_0065 type IV conjugative transfer system protein TraI - Prom 13398 - 13457 3.0 + Prom 13321 - 13380 4.5 17 6 Op 1 . + CDS 13405 - 14022 435 ## SNSL254_p_0064 putative lipoprotein 18 6 Op 2 . + CDS 14004 - 14237 174 ## gi|237640254|ref|YP_002891109.1| hypothetical protein peH4H_0066 19 6 Op 3 . + CDS 14237 - 16429 722 ## COG0550 Topoisomerase IA 20 6 Op 4 . + CDS 16444 - 16932 313 ## SNSL254_p_0062 hypothetical protein + Term 16939 - 16973 6.0 - Term 16925 - 16959 6.0 21 7 Op 1 . - CDS 17023 - 17322 114 ## SNSL254_p_0061 hypothetical protein 22 7 Op 2 . - CDS 17327 - 17533 97 ## ASA_P4G027 hypothetical protein 23 7 Op 3 . - CDS 17534 - 18022 343 ## SNSL254_p_0060 hypothetical protein - Prom 18143 - 18202 4.9 24 8 Op 1 . - CDS 18207 - 18863 215 ## SNSL254_p_0059 hypothetical protein 25 8 Op 2 . - CDS 18863 - 20290 410 ## SNSL254_p_0058 C-5 cytosine-specific DNA methylase family protein 26 8 Op 3 . - CDS 20294 - 20509 104 ## SNSL254_p_0057 hypothetical protein - Term 20721 - 20755 2.1 27 9 Op 1 . - CDS 20803 - 21087 132 ## SNSL254_p_0056 hypothetical protein 28 9 Op 2 . - CDS 21120 - 21626 246 ## SNSL254_p_0055 hypothetical protein 29 9 Op 3 . - CDS 21619 - 22293 423 ## SNSL254_p_0054 hypothetical protein 30 9 Op 4 . - CDS 22268 - 22549 237 ## gi|237640243|ref|YP_002891098.1| hypothetical protein peH4H_0055 31 9 Op 5 . - CDS 22542 - 22790 100 ## SNSL254_p_0053 hypothetical protein - Prom 22947 - 23006 4.8 + Prom 23105 - 23164 6.5 32 10 Tu 1 . + CDS 23246 - 23389 92 ## + Term 23407 - 23450 6.1 33 11 Tu 1 . + CDS 23547 - 24116 303 ## SNSL254_p_0052 hypothetical protein + Term 24122 - 24149 1.5 - Term 24105 - 24143 4.3 34 12 Op 1 . - CDS 24169 - 24441 59 ## SNSL254_p_0051 hypothetical protein 35 12 Op 2 25/0.000 - CDS 24490 - 25671 851 ## COG1475 Predicted transcriptional regulators 36 12 Op 3 . - CDS 25675 - 26460 616 ## COG1192 ATPases involved in chromosome partitioning - Prom 26518 - 26577 9.5 - Term 26585 - 26611 -0.7 37 13 Op 1 . - CDS 26634 - 26945 202 ## SNSL254_p_0048 hypothetical protein 38 13 Op 2 . - CDS 26927 - 27376 270 ## gi|134044457|ref|YP_001101744.1| hypothetical protein YR71pYR1_0050 39 13 Op 3 . - CDS 27390 - 28634 419 ## COG0863 DNA modification methylase 40 13 Op 4 . - CDS 28627 - 28989 221 ## gi|134044534|ref|YP_001101742.1| hypothetical protein YR71pYR1_0048 41 13 Op 5 . - CDS 28992 - 29234 96 ## gi|134044626|ref|YP_001101741.1| hypothetical protein YR71pYR1_0047 - Prom 29280 - 29339 1.9 42 14 Op 1 . - CDS 29472 - 29669 134 ## gi|134044535|ref|YP_001101740.1| hypothetical protein YR71pYR1_0046 43 14 Op 2 . - CDS 29669 - 30607 842 ## YpsIP31758_B0093 DNA-binding protein - Prom 30629 - 30688 4.0 - Term 30667 - 30706 2.8 44 15 Op 1 . - CDS 30724 - 31269 57 ## pQBR0132 hypothetical protein 45 15 Op 2 . - CDS 31272 - 31646 56 ## gi|134044628|ref|YP_001101737.1| hypothetical protein YR71pYR1_0043 - Prom 31734 - 31793 2.4 - Term 31799 - 31843 -0.0 46 16 Tu 1 . - CDS 31853 - 32071 109 ## gi|118614808|ref|YP_908591.1| hypothetical protein P99018ORF_180 - Prom 32315 - 32374 1.6 - Term 32270 - 32323 1.3 47 17 Op 1 . - CDS 32409 - 32834 171 ## gi|118614807|ref|YP_908590.1| hypothetical protein P99018ORF_179 48 17 Op 2 . - CDS 32834 - 33181 232 ## gi|229516114|ref|ZP_04405564.1| hypothetical protein VCC_000128 49 17 Op 3 . - CDS 33193 - 34326 307 ## gi|258624183|ref|ZP_05719133.1| hypothetical protein VMB_04340 50 17 Op 4 . - CDS 34371 - 34565 238 ## gi|134044458|ref|YP_001101732.1| hypothetical protein YR71pYR1_0038 51 17 Op 5 . - CDS 34614 - 35006 415 ## gi|118614804|ref|YP_908587.1| hypothetical protein P99018ORF_176 52 17 Op 6 . - CDS 35068 - 36531 1018 ## COG0464 ATPases of the AAA+ class 53 17 Op 7 . - CDS 36605 - 37048 247 ## gi|229516106|ref|ZP_04405556.1| hypothetical protein VCC_000120 - Term 38047 - 38083 4.0 54 18 Op 1 . - CDS 38099 - 38596 354 ## SNSL254_p_0032 hypothetical protein 55 18 Op 2 . - CDS 38599 - 39087 87 ## COG4333 Uncharacterized protein conserved in bacteria - Prom 39150 - 39209 3.7 + Prom 39101 - 39160 4.1 56 19 Tu 1 . + CDS 39184 - 39519 387 ## SNSL254_p_0030 hypothetical protein + Term 39547 - 39595 0.9 57 20 Op 1 . - CDS 39534 - 40004 195 ## SNSL254_p_0029 hypothetical protein 58 20 Op 2 . - CDS 39997 - 40368 152 ## SNSL254_p_0028 hypothetical protein 59 20 Op 3 . - CDS 40379 - 40573 229 ## SNSL254_p_0027 hypothetical protein - Term 40697 - 40736 5.0 60 21 Tu 1 . - CDS 40914 - 41462 322 ## SNSL254_p_0026 hypothetical protein - Prom 41494 - 41553 4.4 + Prom 41545 - 41604 2.5 61 22 Op 1 4/0.000 + CDS 41625 - 41975 178 ## COG4683 Uncharacterized protein conserved in bacteria 62 22 Op 2 . + CDS 41980 - 42282 284 ## COG1396 Predicted transcriptional regulators + Term 42284 - 42323 6.2 - Term 42651 - 42689 1.8 63 23 Op 1 . - CDS 42691 - 42963 255 ## COG0776 Bacterial nucleoid DNA-binding protein 64 23 Op 2 . - CDS 43021 - 43548 218 ## COG1525 Micrococcal nuclease (thermonuclease) homologs 65 23 Op 3 . - CDS 43551 - 43742 187 ## gi|300925742|ref|ZP_07141600.1| conserved domain protein 66 23 Op 4 . - CDS 43768 - 44625 317 ## SNSL254_p_0020 hypothetical protein 67 23 Op 5 . - CDS 44612 - 44839 95 ## SNSL254_p_0019 hypothetical protein 68 23 Op 6 . - CDS 44842 - 45360 224 ## SNSL254_p_0018 hypothetical protein 69 23 Op 7 . - CDS 45357 - 45803 263 ## SNSL254_p_0017 hypothetical protein 70 23 Op 8 . - CDS 45803 - 46162 121 ## SNSL254_p_0016 hypothetical protein - Term 46171 - 46203 4.7 71 24 Op 1 . - CDS 46220 - 46648 203 ## SNSL254_p_0015 putative lipoprotein 72 24 Op 2 . - CDS 46682 - 47542 574 ## COG1651 Protein-disulfide isomerase 73 24 Op 3 . - CDS 47558 - 48517 391 ## COG0616 Periplasmic serine proteases (ClpP class) 74 24 Op 4 . - CDS 48517 - 49371 165 ## SNSL254_p_0012 hypothetical protein 75 24 Op 5 . - CDS 49376 - 49669 267 ## SNSL254_p_0011 hypothetical protein 76 24 Op 6 . - CDS 49680 - 50060 230 ## SNSL254_p_0010 hypothetical protein - Prom 50168 - 50227 2.4 77 25 Op 1 . - CDS 50250 - 50771 167 ## SNSL254_p_0009 hypothetical protein 78 25 Op 2 . - CDS 50774 - 51295 233 ## SNSL254_p_0008 hypothetical protein 79 25 Op 3 . - CDS 51300 - 51908 391 ## SNSL254_p_0007 hypothetical protein - Prom 52114 - 52173 4.0 80 26 Tu 1 . - CDS 52407 - 52592 122 ## - Prom 52644 - 52703 1.6 81 27 Op 1 . + CDS 53001 - 53291 163 ## SNSL254_p_0006 phosphoadenosine phosphosulfate reductase family protein 82 27 Op 2 . + CDS 53353 - 53742 183 ## SNSL254_p_0005 hypothetical protein - Term 54714 - 54739 -0.5 83 28 Op 1 . - CDS 54779 - 55843 616 ## SNSL254_p_0003 plasmid replication protein RepA 84 28 Op 2 . - CDS 55864 - 56151 200 ## SNSL254_p_0002 hypothetical protein 85 28 Op 3 . - CDS 56156 - 56695 226 ## SNSL254_p_0001 hypothetical protein - Prom 56871 - 56930 4.2 86 29 Tu 1 . + CDS 57194 - 58177 581 ## SNSL254_p_0198 hypothetical protein + Term 58292 - 58329 1.8 87 30 Tu 1 . + CDS 58489 - 58908 167 ## SNSL254_p_0196 hypothetical protein + Term 58914 - 58951 7.4 - Term 58897 - 58944 12.1 88 31 Op 1 . - CDS 58968 - 59282 106 ## SeHA_C1597 putative regulator protein - Prom 59357 - 59416 2.8 89 31 Op 2 . - CDS 59516 - 60181 399 ## SNSL254_p_0193 hypothetical protein 90 31 Op 3 . - CDS 60135 - 60668 195 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 91 31 Op 4 . - CDS 60668 - 60940 127 ## SNSL254_p_0191 hypothetical protein + Prom 61577 - 61636 5.6 92 32 Tu 1 . + CDS 61656 - 62018 103 ## SNSL254_p_0190 hypothetical protein + Term 62019 - 62048 3.5 - Term 62004 - 62039 7.4 93 33 Op 1 . - CDS 62056 - 65670 1300 ## SNSL254_p_0189 type IV conjugative transfer system protein TraG 94 33 Op 2 . - CDS 65683 - 67116 693 ## SNSL254_p_0188 type IV conjugative transfer system protein TraH 95 33 Op 3 . - CDS 67118 - 67891 375 ## SNSL254_p_0187 type IV conjugative transfer system protein TraF 96 34 Op 1 . - CDS 68269 - 69780 405 ## COG0210 Superfamily I DNA and RNA helicases 97 34 Op 2 . - CDS 69789 - 70067 93 ## SNSL254_p_0185 hypothetical protein 98 34 Op 3 . - CDS 70067 - 71107 808 ## SNSL254_p_0184 hypothetical protein - Prom 71162 - 71221 5.7 - Term 71204 - 71237 2.9 99 35 Tu 1 . - CDS 71260 - 71460 158 ## SNSL254_p_0183 DNA replication terminus site-binding protein - Prom 71698 - 71757 2.6 100 36 Op 1 . - CDS 72452 - 72943 189 ## SNSL254_p_0182 hypothetical protein 101 36 Op 2 . - CDS 72940 - 73230 109 ## SNSL254_p_0181 putative exonuclease 102 37 Tu 1 . - CDS 73814 - 74557 254 ## COG0582 Integrase 103 38 Op 1 . - CDS 74827 - 75363 227 ## SNSL254_p_0179 hypothetical protein 104 38 Op 2 . - CDS 75356 - 75643 103 ## SNSL254_p_0178 hypothetical protein 105 38 Op 3 . - CDS 75662 - 75943 271 ## SNSL254_p_0177 hypothetical protein - Prom 76066 - 76125 7.8 + Prom 76081 - 76140 3.5 106 39 Tu 1 . + CDS 76213 - 76815 326 ## SNSL254_p_0176 hypothetical protein + Term 76824 - 76866 2.9 - Term 76790 - 76820 1.0 107 40 Tu 1 . - CDS 76831 - 77253 147 ## SNSL254_p_0175 hypothetical protein - Prom 77298 - 77357 3.1 Predicted protein(s) >gi|299857043|gb|ADWS01000021.1| GENE 1 154 - 582 139 142 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0082 NR:ns ## KEGG: SNSL254_p_0082 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 128 1 128 1828 247 100.0 9e-65 MINFKPKIPAMLGALAVLTAGAAHAELLEYTFKAPDGTQRSLTPNANYANPTGNISFALS AGIDRKVKISVLRSDGTVVSTATSHLLGATDRITVGGKSYYGAELQLPAPVGGAYTIRAE ILASDGSTGKRQRSTVLTLIYW >gi|299857043|gb|ADWS01000021.1| GENE 2 783 - 1166 293 127 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0078 NR:ns ## KEGG: SNSL254_p_0078 # Name: traA # Def: type IV conjugative transfer system protein TraA # Organism: S.enterica_Newport # Pathway: not_defined # 1 127 1 127 127 209 100.0 2e-53 MNANQLANASSKNNALFLFLGLMVVAFLLVPDQAHAGTGGTAFDDVWVTLKDWTQGTLGR IVAGAMILVGVVGGIARQSLMAFAMGIGGGMGLYNSPTVVESIMSATLEHAEKVIPAVVQ LSNGLGV >gi|299857043|gb|ADWS01000021.1| GENE 3 1179 - 1676 203 165 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0077 NR:ns ## KEGG: SNSL254_p_0077 # Name: traV # Def: type IV conjugative transfer system protein TraV # Organism: S.enterica_Newport # Pathway: not_defined # 1 165 28 192 192 296 100.0 2e-79 MLGVGAALLILSGCSTFNIGKDEYSCPGMPNGVQCMSARDVYAATNDGNVPRPMKPEEVE AKAEADGEGSSNVSANSSSSGDPVIDNYVAPRLPDRPIPIRTPAQVMRIWVAPWEDTNGD LIVTGYVYTEIEPRRWVIGDGTPQSEPVLRPLQTVQHEPKSETTK >gi|299857043|gb|ADWS01000021.1| GENE 4 1754 - 3070 574 438 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0076 NR:ns ## KEGG: SNSL254_p_0076 # Name: traB # Def: type IV conjugative transfer system protein TraB # Organism: S.enterica_Newport # Pathway: not_defined # 1 438 1 438 438 800 100.0 0 MIKRFWTQLDPNKKRWVSIAGGVFVLFAVVTMFSGEPKKEEKRGRQETIKHVLTDKNTRE IGIDSLSADVKMVSRENSDLKKELERVKKELEETKTTAGKSSDVGREMTRLRQDLDRLTQ KNMELAKKVETGAAGGKTSSSSEDARADVNGASGGDGQFMEKKLDYKDPASFFRDAPLPD SKGGAPATGKGDGRDATKPGIQIVSYSQKAPEVEEKDNKDDESIYLPSGSILTGVLINGM DAPTSQGARRDPFPSTLRIQKEAILPNRFRADVRECFLIVSGYGDLSSERAYLRGETFSC VRDDGGVIEAKLDSYAVGEDGKAGVRGRVVSKQGQIIAKSLMAGFLGGVSEAFDVNPVPV VSTNPGSNTQYQSVFSDQMLQGAAVKGASKALDRIAQFYIDMAEGIFPVIEVDAGRQVDI IVTKGTKLQIRSTGGTKK >gi|299857043|gb|ADWS01000021.1| GENE 5 3067 - 3984 457 305 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0075 NR:ns ## KEGG: SNSL254_p_0075 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 305 1 305 305 567 100.0 1e-160 MKNNAKLSLLALSLALGTSMAYASDDIPVVPASVMKKDVPAPVTSGQSSHEVVGSMNENP LLTMKPGVNQIIPIAVGHPNRIVTPFSNPEIVSTSLTGATDNGQCGEVCIKENVVYVATD KQYPVTMFITEKGSEAQALSLTMVPRRIPPREVFLKLDGGVGITGAFANTKAETWEQSQP YVETIRSVFRKIALGEVPQGYTLNRIPAGAAVPSCAHPGVKVDFSKGQYMMGHHLNVFIG VALNVSDQPIEFKEALCGSWDVAAVTTWPLNVLEPGQKTEIYVAKKQKRGLAPTSKRPSL LGGAQ >gi|299857043|gb|ADWS01000021.1| GENE 6 3968 - 4594 480 208 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0074 NR:ns ## KEGG: SNSL254_p_0074 # Name: traE # Def: type IV conjugative transfer system protein TraE # Organism: S.enterica_Newport # Pathway: not_defined # 1 208 1 208 208 389 100.0 1e-107 MNLKKYLKTWEGTQTENKWGRIFQGGLIAIVFLLVVQVFSKETIVTIQPFTLTEEAWVTK SNASQSYKEAWGFAFAQLLGNVTPGTVDFVKERITPLLSPSIYQDVIDAIEIQAQQIKND RVTMRFEPRFVEYEPKSDKVFVYGYSYVKGASSNEERSERSYEFAIKISNYAPVLDYIDT YVGKPRTKTVLEQLQRKEENRRKHEEQR >gi|299857043|gb|ADWS01000021.1| GENE 7 4591 - 4872 123 93 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0073 NR:ns ## KEGG: SNSL254_p_0073 # Name: traL # Def: type IV conjugative transfer system protein TraL # Organism: S.enterica_Newport # Pathway: not_defined # 1 93 1 93 93 179 100.0 2e-44 MKPVKIPRRVDEPPHLLLWSADELAPMLLGLTIGVIIGKALICFLGGLLVTNLYRRFRDN HPDGYLLHMIYWAGFIMTKAKSLKNPFVRRYLP >gi|299857043|gb|ADWS01000021.1| GENE 8 5016 - 5348 247 110 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0072 NR:ns ## KEGG: SNSL254_p_0072 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 110 12 121 121 184 100.0 9e-46 MNAVLMCIFIVPVAVAFWLSAFAAGFDWSQWVKLAADTANRAASDPAKALGTVQTYWGIL SFFLLAAYSLMFKFKANANKEVKTLEVARPANEVSVAASEKHSEAVPQNQ >gi|299857043|gb|ADWS01000021.1| GENE 9 5393 - 5536 79 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSAQAHVRESESSSGSFISWQFLVWQVMFVIGVVAGMNLEHAFNFLG >gi|299857043|gb|ADWS01000021.1| GENE 10 5717 - 6379 366 220 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0071 NR:ns ## KEGG: SNSL254_p_0071 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 25 220 1 196 196 399 100.0 1e-110 MRKRDFFFGEVYEGSGGATLRLSDMEPLARKVSAEFFTAQLNRILKEHDGQLTLSDGTSY PSFWSFIDKVDPEQVGFVEIYARQDVNDNVEATLACDIVLVNGVITVKPHWCAYKDIRAD EVISTLLVPLHLKALQGKAYIRWDDGETEPLLQNDDYQAELENVFSVSKYPSAMSWGDTA DQKVKQYKMDLECATDVGRRGVSSEQAWDAYRELRYNRTV >gi|299857043|gb|ADWS01000021.1| GENE 11 6379 - 6756 307 125 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0070 NR:ns ## KEGG: SNSL254_p_0070 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 125 1 125 125 236 100.0 2e-61 MKVTNRLQLLALGLCIAGTAIAAPDVLNDDAKLKNLEKVCPDCQMVAKDVLNLRVENCQL KDTSSAMMIGTMQNDPMFSFMLAVHTAAGSEAYKTVVGAAGNHVDCENPLNWIKLTQQAI KGGKV >gi|299857043|gb|ADWS01000021.1| GENE 12 6998 - 7174 67 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|165938104|ref|ZP_02226664.1| ## NR: gi|165938104|ref|ZP_02226664.1| hypothetical protein YPIP275_2874 [Yersinia pestis biovar Orientalis str. IP275] # 20 58 1 39 39 68 97.0 2e-10 MRHPIERLPGDTSPILVCVVALLGAELEFGEGAHCLRRKDDLCDAGNVVLGAGGVPLG >gi|299857043|gb|ADWS01000021.1| GENE 13 7222 - 7851 519 209 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0068 NR:ns ## KEGG: SNSL254_p_0068 # Name: not_defined # Def: putative type IV conjugative transfer system coupling factor # Organism: S.enterica_Newport # Pathway: not_defined # 1 209 1 209 209 380 100.0 1e-104 MKKPWLLVAWLLVIELLAILLLIPGDWTDRAIKRESELVEQSLGVEARDWIQNKASTWFR SSVIDSGFYEGMYQTLIPSEEERQKSKGMQDMGKGWFVWVKGRMEAFVNVIYQFYTRLAL LAAWAPYMLILFVPAVYDGMMTWRIKRTNFDYASPVLHRYSVRGTMYLMAGLFIAFFIPI ALDPVVIPMTMMTCCVLVGLTFGNLQKRV >gi|299857043|gb|ADWS01000021.1| GENE 14 7808 - 8353 321 181 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0067 NR:ns ## KEGG: SNSL254_p_0067 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 181 14 194 194 368 100.0 1e-101 MVDVNPFDRVMNELKSRGRKNAHILSILQFDWPASEAIIEKLSCYITDGIKANQEPVIYP IIEEALHRYSQLVFHEQREKYEDPARIGAFLETLITETCRALEVQIVDSGGDSWSVDSGE SFSLWLSSHPGELSINPQPHEDETSLRGLLYELITCESVKTVLRRTDYEEAVVAGRMAAG Y >gi|299857043|gb|ADWS01000021.1| GENE 15 8403 - 10268 861 621 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0066 NR:ns ## KEGG: SNSL254_p_0066 # Name: traD # Def: type IV conjugative transfer system protein TraD # Organism: S.enterica_Newport # Pathway: not_defined # 1 621 1 621 621 1271 100.0 0 MTMSYDPLAYEMPWRPNYEKNAVAGWLAASGAALAVEQVSTMPPEPFYWMTGICGVMAMA RLPKAIKLHLLQKHLKGRDLEFISIAELQKYIKDTPDDMWLGSGFLWENRHAQRVFEILK RDWTSIVGRESTVKKVVRKIQGKKKELPIGQPWIHGVEPKEEKLMQPLKHTEGHSLIVGT TGSGKTRMFDILISQAILRGEAVIIIDPKGDKEMRDNARRACEAMGQPERFVSFHPAFPE ESVRIDPLRNFTRVTEIASRLAALIPSEAGADPFKSFGWQALNNIAQGLVITHDRPNLTK LRRFLEGGAAGLVIKAVQAYSERVMPDWEAEAAAYLEKVKNGSREKIAFALMKFYYDIIQ PEHPNSDLEGLLSMFQHDQTHFSKMVANLLPIMNMLTSGELGPLLSPDSSDLSDERQITD SAKIINNAQVAYLGLDSLTDNMVGSAMGSIFLSDLTAVAGDRYNYGVNNRPVNIFVDEAA EVINDPFIQLLNKGRGAKLRLFVATQTFADFAARLGSKDKALQVLGNINNTFALRIVDGE TQEYIADNLPKTRLKYVMRTQGQNSDGKEPIMHGGNQGERLMEEEADLFPAQLLGMLPNL EYIAKISGGTIVKGRLPILTQ >gi|299857043|gb|ADWS01000021.1| GENE 16 10265 - 13237 974 990 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0065 NR:ns ## KEGG: SNSL254_p_0065 # Name: traI # Def: type IV conjugative transfer system protein TraI # Organism: S.enterica_Newport # Pathway: not_defined # 1 990 1 990 990 1771 100.0 0 MLKALNKLFGGRSGVIETAPSVRVLPLKDVEDEEIPRYPPFAKGLPVAPLDKILATQAEL IEKVRNSLGFTVDDFNRLVLPVIQRYAAFVHLLPASESHHHRGAGGLFRHGLEVAFWAAQ ASESVIFSIEGTPRERRDNEPRWRLASCFSGLLHDVGKPLSDVSITDKDGSITWNPYSES LHDWAHRHEIDRYFIRWRDKRHKRHEQFSLLAVDRIIPAETREFLSKSGPSIMEAMLEAI SGTSVNQPVTKLMLRADQESVSRDLRQSRLDVDEFSYGVPVERYVFDAIRRLVKTGKWKV NEPGAKVWHLNQGVFIAWKQLGDLYDLISHDKIPGIPRDPDTLADILIERGFAVPNTVQE KGERAYYRYWEVLPEMLQEAAGSVKILMLRLESNDLVFTTEPPAAVAAEVVGDVEDAEIE FVDPEEVDDDQEEDVSALNDDMLAAEQEAEKALAGLGFGDAMEMLKSTSDAVEEKPEQKD AGSTESSKPDAGKKGKPQSKPGKAKPKSDTEKQPHKPEAKEDLSPQDIAKNAPPLANDNP LQALKDVGGGLGDIDFPFDAFSASAETASTDATNSEIPDVAMPGKQEKQPKQDFVPQEQN SLQGDDFPMFGSSDEPPSWAIEPLPMLTDAPEQTTPAPAMPPTDKPNLHEKDAKTLLVEM LAGYGEASALLEQAIMPVLEGKTTLGEVLCLMKGQAVILYPDGARSLGAPSEVLSKLSHA NAIVPDPIMPGRKVRDFSGVKAIVLAEQLSDAVVAAIKDAEASMGGYQDAFELVSPPGLD ASKNKSAPKQQSRKKAQQQKPEVNAGKPSPEQKAKGKDSQPQQKEKKVDVTSPVEEPQRQ PVQEKQNVARLPKREVQPVAPEPKVEREKELGHVEVREREEPEVREFEPPKAKTNPKDIN AEDFLPSGVTPQKALQMLKDMIQKRSGRWLVTPVLEEDGCLVTSDKAFDMIAGENIGISK HILCGMLSRAQRRPLLKKRQGKLYLEVNET >gi|299857043|gb|ADWS01000021.1| GENE 17 13405 - 14022 435 205 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0064 NR:ns ## KEGG: SNSL254_p_0064 # Name: not_defined # Def: putative lipoprotein # Organism: S.enterica_Newport # Pathway: not_defined # 1 205 1 205 205 420 100.0 1e-116 MRQLIAILGVAILAGCASNAPEQKPQPQTAPAENDKPARVSRELSMAWDNMGRGGAALRQ PGYIHVLGDGNVSATMNKVKDDSAGSDKTPAGIKQHGDVNEAINTFKSMNKGKGYSLYEL SRWERYCDGGKGMDEHDWRFVEAEGTTNIPKDVVTGCIPPTHTYKDYLNAWTHFCTSQAV TDADRRIVRESVRPYSVVNPCKALK >gi|299857043|gb|ADWS01000021.1| GENE 18 14004 - 14237 174 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237640254|ref|YP_002891109.1| ## NR: gi|237640254|ref|YP_002891109.1| hypothetical protein peH4H_0066 [Escherichia coli] # 1 77 1 77 77 124 100.0 2e-27 MQSSEIRNQTELGRKAELFDALLIMLQEAGSRGNSSEAAYVISGVLENLSRDYPEVKGLA QSWTELANLESKMRGAA >gi|299857043|gb|ADWS01000021.1| GENE 19 14237 - 16429 722 730 aa, chain + ## HITS:1 COG:XF1776 KEGG:ns NR:ns ## COG: XF1776 COG0550 # Protein_GI_number: 15838376 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Xylella fastidiosa 9a5c # 82 675 30 606 619 453 40.0 1e-127 MDLYICEKPSQAKDLAGVMKASQRGDGFLHDGGNRVITWAFGHLLELYMPDDYDERYKSW SLETLPIAPESWRYNVRKSAFKQYKIVEGLVKKASTIYISTDYDREGEAIARSLLDRFRY SGPIRRVCLTALDESSIKKALNNVKDGKDTVSLYYAALARQRADWLVGMNVSRLYTVLAR DVGFNHTLHVGRVITPTVALVCQRDREIAGFTPSPYWTLGVNVSVQNGQFAAQWIPPEEC SDEQGRCVNKAYAEQVASQVNGANAVISKAETKPGKESAPLPFDLTSLQQYASKRWGYTA QQVLDAAQALYETHKATTYPRTDSRYLPESQKEDIPDILQALILSDQNVSGLVAGADPHR KARVFNDAKVTAHHAIIPTPARTDISAMSEIEFNLYDAIRRFYIAQFYSEFEFTKTSIEV QCGRHLFASAGKTPTKQGWKVLFASDSESSPKDEGEDTDAPVEQEKLPRVSQGEPALLNG AELANKMTRPAPHFTEATLLAAMENIARFVTEEKFKQILKDTAGLGTPATRASIIQGAVD KGYFKRQKKVLLATDKAHALIAVLPPAIKSPGMTAAWEQELEKVASGSGNMSVFMKQIST WICQMVEQLKVAAPVLTKEGGAMAKAFEGAKPPSHECFNCGGEMHRIKGKNGFFWGCQNE ACKKTFPDNRGKPEKRIAAEDCPDCPDCGSPMRLRKGKAPGKKRASKFWGCTAYPDCKGT MPFKKSDFMD >gi|299857043|gb|ADWS01000021.1| GENE 20 16444 - 16932 313 162 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0062 NR:ns ## KEGG: SNSL254_p_0062 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 162 1 162 162 291 100.0 6e-78 MFGKIILTAMLTTSSATAEDAGKNIASGLATASTRQIGQAIMPTLAIGSAIAKSAGKGMV LGFAETSASYISHDDLSATRSYQNPEAVDMAKGLGTLKDVPDFLYVITDVNANMADKCKR VWEPQSLALSQLIVELVALRKTNNKGSYEQALSHLDCSIFTN >gi|299857043|gb|ADWS01000021.1| GENE 21 17023 - 17322 114 99 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0061 NR:ns ## KEGG: SNSL254_p_0061 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 8 99 1 92 92 184 100.0 1e-45 MSYQVVIMKKRILHLPVKKIYFDQIKSGEKPDEYRLVTDYWIKRLEGREYDEVHVKCGYP KAGDMSRIEIRPWRGFSRNVITHPHFGDYPVEVFAIHVN >gi|299857043|gb|ADWS01000021.1| GENE 22 17327 - 17533 97 68 aa, chain - ## HITS:1 COG:no KEGG:ASA_P4G027 NR:ns ## KEGG: ASA_P4G027 # Name: not_defined # Def: hypothetical protein # Organism: A.salmonicida # Pathway: not_defined # 7 64 5 61 64 66 58.0 3e-10 MGFGVDKIDRQSWLVKFRRAKCQDTLDTMRDAAIRNYEGNIRVIADIVLAHEARETEIEK GMFCLIVR >gi|299857043|gb|ADWS01000021.1| GENE 23 17534 - 18022 343 162 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0060 NR:ns ## KEGG: SNSL254_p_0060 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 162 44 205 205 306 100.0 1e-82 MYREGRGLKPYEHEYARRLVLGLSGPLPRELRGKPVTVISDVSRPKKVKRQPKQFVKTVN GVTLERQLVADARDQLEMQTGVWLKQPQLIELMEESGIDETLADFGEAETQIREMLADAL AMKLVGRSWPKCGALYNAAEKSDVNFSSELDAAAKEAGYMVR >gi|299857043|gb|ADWS01000021.1| GENE 24 18207 - 18863 215 218 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0059 NR:ns ## KEGG: SNSL254_p_0059 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 218 1 218 218 427 100.0 1e-118 MAVIYYGEGTHDAGFVGFRVARTVGVADDYRQEYFSLREYSYATAHRLAYSLDRKWEAEA EEVKRQNKTCKRRRNSGPNIIAEGLRAYISIENRSRMGVKRTYFAPCFLVTKPGYGNGDI VFRISTHGYAEAYEKAVEKYCEIHDLTDEQYVELLDRMPSTEVFTGYLLNALLIRGHRAT KAEILSKLGAAKNEDDITNSKGKSGHNRVRCPEYRWAQ >gi|299857043|gb|ADWS01000021.1| GENE 25 18863 - 20290 410 475 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0058 NR:ns ## KEGG: SNSL254_p_0058 # Name: not_defined # Def: C-5 cytosine-specific DNA methylase family protein # Organism: S.enterica_Newport # Pathway: Cysteine and methionine metabolism [PATH:see00270]; Metabolic pathways [PATH:see01100] # 1 475 1 475 475 976 100.0 0 MLPIVSPSVVTKQLAFNRVGDKRKVRVSSNFLDVMGFKPGMGIAVEPGEGMGGFSVIPAT DELQTHQVYQRRYQPKSRSNNPLETVIEFSGQGLIDKCFPRYTERFHVEMRKGRVVFTPV ANRAFAIADRFRKTSPFRAFVALTGGVDIHVMESLGWKAEIVLEHRPVEARDRASGRNLS EVHALNTLVNSSPRILLNEDIHHLELDRLGALLAECPPIGLAHYSLGCDDHSNAKSPRDK ERSLEDLSTMLDMVYPALKQIEVVNPAVVLVENVPNFKASGAGAMMGTTLRRMGYFLTEM VLNGLDFGAYQGRERYYMVASVFPGFVPPKPEQRAGGRLWPVIEKHLGDCADVTALKSIQ ARESTSRRMPAFLTRESTSCPTILKSQDRGVKDAVYIQDGGRIYKPSVDLVQELMSIPDS FDISWMAKEQATETLGQSVDYRLHSAVMAAVRDHLNVNCGRHTVVQHGIRSKEGK >gi|299857043|gb|ADWS01000021.1| GENE 26 20294 - 20509 104 71 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0057 NR:ns ## KEGG: SNSL254_p_0057 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 71 96 166 166 114 98.0 1e-24 MPFGVYTTRLAALKFAKVSLQEEVQYCEAELKKAQTEEDTQELQEELAENQRLLKAAGAM VKREQNKKKRG >gi|299857043|gb|ADWS01000021.1| GENE 27 20803 - 21087 132 94 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0056 NR:ns ## KEGG: SNSL254_p_0056 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 94 10 103 103 176 98.0 3e-43 MLDESPDMPLQFKWRKFGGAIFTATQTMEHVKEGRKLGPTPAGMLPQEVWLNRLIAMEET LPRGKFFDRFRRRDKNEQYDLAADHLRLVGQKKR >gi|299857043|gb|ADWS01000021.1| GENE 28 21120 - 21626 246 168 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0055 NR:ns ## KEGG: SNSL254_p_0055 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 168 1 168 168 335 100.0 3e-91 MIDLTCRLCAGSGVYDFSPSKETCGMCQGHGKFVDAKAMLVAAIELAKKQREPVIEVVMG LVLQGVDVRGKEPGERFKAAQAFNAPGHNLLRYGWDAWELYALHEGVSPELASLGRSVMR EWHSHSWGRFSGEVGFNAAEIMIKQAKDNPEKAEERWAFLLSEEWMVE >gi|299857043|gb|ADWS01000021.1| GENE 29 21619 - 22293 423 224 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0054 NR:ns ## KEGG: SNSL254_p_0054 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 224 1 224 224 416 100.0 1e-115 MDENKLNIETVDGHNELVVSFLSRMVSLSDEEKQTVLSCLPDTGKQTITQLYEALRSQGH QDLAEKVEPYLQQGVFGPIFDNAKSKVFVRDEAPFFLMDENPLNWDDAKAFNRLRMSTTC VLGRGGWTIGERFDDRFDTEVGGTQLIVTQSLNEKGEIEGGLPTSMSLNDFAEFPKQPRP PQIVDYQEDKRYTLEEAEAIPELAPVVQRLKERIEEYEERRAHD >gi|299857043|gb|ADWS01000021.1| GENE 30 22268 - 22549 237 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237640243|ref|YP_002891098.1| ## NR: gi|237640243|ref|YP_002891098.1| hypothetical protein peH4H_0055 [Escherichia coli] # 1 93 1 93 93 188 100.0 9e-47 MSKRYAVVPHPKLKREYKGRLVRTTRVLKNGWGLIPLGAVATVTHQSPKGSELTFEPCDC CGLKAIISHVSMDSIEFIEPITEEEDGREQAQH >gi|299857043|gb|ADWS01000021.1| GENE 31 22542 - 22790 100 82 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0053 NR:ns ## KEGG: SNSL254_p_0053 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 82 44 125 125 171 100.0 1e-41 MTTFHCHKTVHSKSGGEWDEEGNYAPSGQESMCAGAAAYLMKIGRPTVAMRIAFAFGDAK VSDWDEAQELVVEPLVQGDRNE >gi|299857043|gb|ADWS01000021.1| GENE 32 23246 - 23389 92 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLQGNTNTNKRIPLAAFMKWPLAKRQDFIDREMSGCPDFIKTSLLRH >gi|299857043|gb|ADWS01000021.1| GENE 33 23547 - 24116 303 189 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0052 NR:ns ## KEGG: SNSL254_p_0052 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 179 23 201 211 372 100.0 1e-102 MGTSRFVEAFIDQWAYLQTGLYPAKEEIPEELQPVAFELSHVLSAAIKRDPTSDVLGYVL SMSGFHKKGTNYFPTPPEIGRLMSLIVGSQSSADFYEPCCGSGINAIHWMENLIENHGPE ALREASIYLEDIDPLMVKCCMIQLFHYFESRNTTPKTLSIVGIDTLSRRTKNIAYYAEKP PATAATVAA >gi|299857043|gb|ADWS01000021.1| GENE 34 24169 - 24441 59 90 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0051 NR:ns ## KEGG: SNSL254_p_0051 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 90 3 92 92 171 100.0 6e-42 MKISQDMKRKFALVNALSKTEKPSLQDLHKATNIPESTIKRQLSALRDEFGMNILFVRES TGERGATGYYMLTDWGILDRSSFLNRYGKL >gi|299857043|gb|ADWS01000021.1| GENE 35 24490 - 25671 851 393 aa, chain - ## HITS:1 COG:BS_yyaA KEGG:ns NR:ns ## COG: BS_yyaA COG1475 # Protein_GI_number: 16081151 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 22 168 28 176 283 81 37.0 2e-15 MALNNLKGLSELAKAAKGKKGKEVLTVPVDDVVSKVQVRKRFRNIEELAATLLTEGQQSP IIVFPKNEEGKFVIQKGERRWRACKHAGIETIDLVVNDKVQNNLDETAGELIENIQRDDL TPVEIAEALNLFIEEGWKQKDIADRLGKNITFVSTHLSLLKLPDCVRELYDNEVCSDTET LNNLRLLFDLNEERCRAVCAVAMSDGITRKQSRELLNDAKRIKDEMEKGPLTGSHQNDEL GAGNTDEQSLNSGGDGTSEQTGNDDLNLAQEELEGGKNSNGQDDDDEDPLRDEEGEHKDP VKQPDNSGKDKDEEGGDALPPLPKDKEWKNVRADSLIFAVNVNLDGETKRGVIMTDRVAL VPSTVWVKTLDGEGKEKHVHVPVSDIELLSVEG >gi|299857043|gb|ADWS01000021.1| GENE 36 25675 - 26460 616 261 aa, chain - ## HITS:1 COG:BB0431 KEGG:ns NR:ns ## COG: BB0431 COG1192 # Protein_GI_number: 15594776 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Borrelia burgdorferi # 3 260 2 248 250 114 31.0 1e-25 MAKVISFANQKGGVGKSTLCIQQAFYLALQKKKKVLVLDMDGQGNTSSRLAPRRELEDGD YEPILTGTKTAELFAYELDGIEVMHCPCGADLIHTPKNDPDLFEMEAVPLDQAMNPARHL AELFENYDYVLIDCPPSLGRKLVAALVMSTHVACPVKLSGFAVDGVEGLLNTIIGVREAY NQNLEILGIVINDMDRSVNHDKALKSLENTVPDLLFENKIMHRPPLDTATTDGIPVWELR YGHVAAKEVEAVLEELLEKVG >gi|299857043|gb|ADWS01000021.1| GENE 37 26634 - 26945 202 103 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0048 NR:ns ## KEGG: SNSL254_p_0048 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 103 1 103 103 201 98.0 9e-51 MDTQELNHMIAEAYSRDLQKPELVSFKEVSRWGRKYGFPVVCTLADESEEKQIHWAASLL IQVAGTWPREDMPELLTPERGSALFNDAMQLLANGLGAANQLR >gi|299857043|gb|ADWS01000021.1| GENE 38 26927 - 27376 270 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|134044457|ref|YP_001101744.1| ## NR: gi|134044457|ref|YP_001101744.1| hypothetical protein YR71pYR1_0050 [Yersinia ruckeri] # 1 143 1 143 143 279 94.0 3e-74 MNLSIIARVLRQLAIIFVLSVLLVAGYIYYAGKQHQQAAINFWGEQYQPDAISTQIDWGF IGNWVIPRGGPIISPGIAGVCPNTPLPVVPLKTGPDGRGYVLCGIGSEAVATSFDVNDIQ DEEIRNTLKTMFEEEFEKTVKGDKWTLKN >gi|299857043|gb|ADWS01000021.1| GENE 39 27390 - 28634 419 414 aa, chain - ## HITS:1 COG:all1290 KEGG:ns NR:ns ## COG: all1290 COG0863 # Protein_GI_number: 17228785 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Nostoc sp. PCC 7120 # 191 386 2 191 200 119 32.0 7e-27 MSSQLELFHVQEAYAKADKPLSNEELYDSVAELAGIPKSALNEQSEIGKAKVKRSKLKRQ IRWYQQTLKSMNLLQKVDGERGVWELSSKTKKGLHEALGGVRLVAYSTNLGLAVWSNNKS FFSDLDEPVHLCVTSPPFPLRIQRGYGNVDEAKWVDFITQALEPIVKNLVPGGSVVLNVS NDIFEAKSPSRSLYVERMVLALHDRLGLSLMDRWPWINLSKPPSPTHWACVNRYQLCAGW EPVYWFTNDPDRVRSDNRRVLIPHTEKHQKLMAQGGDNRVVSYGDGAYRLRGNAFSNVTE GRIPKNVIQRGHRCADTLELRRIARELGLPPHPAMFPTDIPEMAIRFLTEEGDLVVDPFS GSNKSGLAAERNNRRWIACDIILEYIRTQAEMFTGFDGFWMNPAIAAVGGGALN >gi|299857043|gb|ADWS01000021.1| GENE 40 28627 - 28989 221 120 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|134044534|ref|YP_001101742.1| ## NR: gi|134044534|ref|YP_001101742.1| hypothetical protein YR71pYR1_0048 [Yersinia ruckeri] # 1 120 1 120 120 237 98.0 2e-61 MRSVFVWLKAGAILAFLFFGIAGAVNRVYWVNSQGLSQGSMSSTLVKEKFGLDLGAMCRY DKPQHVEFKVLPDQTIQFRCSWFEGGGLTWWPFYTEHDVKSAEATSVLNDIFQGTEGHDE >gi|299857043|gb|ADWS01000021.1| GENE 41 28992 - 29234 96 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|134044626|ref|YP_001101741.1| ## NR: gi|134044626|ref|YP_001101741.1| hypothetical protein YR71pYR1_0047 [Yersinia ruckeri] # 1 80 1 80 80 145 97.0 1e-33 MAKLKVYGGITYGAEGQFRTVVAATSKSKAASILNITIYQMNSWWTETFNKYEVEAAMSE PGAIFSKPLDGRDPFVKQEG >gi|299857043|gb|ADWS01000021.1| GENE 42 29472 - 29669 134 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|134044535|ref|YP_001101740.1| ## NR: gi|134044535|ref|YP_001101740.1| hypothetical protein YR71pYR1_0046 [Yersinia ruckeri] # 1 65 1 65 65 98 100.0 1e-19 MGRCTVEDAIQLLEGGTIVAVVPASSGPDTLVVSSIRLESGLTVQFSPPAAASVSVQLAE LDDEQ >gi|299857043|gb|ADWS01000021.1| GENE 43 29669 - 30607 842 312 aa, chain - ## HITS:1 COG:no KEGG:YpsIP31758_B0093 NR:ns ## KEGG: YpsIP31758_B0093 # Name: not_defined # Def: DNA-binding protein # Organism: Y.pseudotuberculosis_IP31758 # Pathway: not_defined # 20 265 29 282 385 118 33.0 3e-25 MAVINSLRALKGVTAPEELKKGDGFTISPQLLLEEEGFNTRGAFCEDYYERPDIKAGIRV LADAYKRGDYVPPIIVKVIDGKVYVREGHRRRRAILLAIEEGADIQFVQVVEHKGDEAEQ SLLIATSNDGLPLSPLERAVIYARLANWGWSDQMIAQRVGRSAEHVRIARALLEMPLELK RMIQEGSVAATYAQELYNEHGTNAVEILKKAQEEQASGNDGKKAPKKLTKKSVEKGPRLG KKVVEAMHRGVSSITSRLDNIKPNDDGETFTLTLSREDVDAFQELKAKLAELEPKTDESN EDQQELDLAGNQ >gi|299857043|gb|ADWS01000021.1| GENE 44 30724 - 31269 57 181 aa, chain - ## HITS:1 COG:no KEGG:pQBR0132 NR:ns ## KEGG: pQBR0132 # Name: not_defined # Def: hypothetical protein # Organism: P.fluorescens_SBW25 # Pathway: not_defined # 16 177 16 180 191 117 41.0 1e-25 MEQIRKGLTLEYAKEKREKLLAELKSDEHYSQTETVAYGHHDPLSVPVAACDSCHGRAQM QKVIGPPVRWNMVCLGCGKAIQQIQKRPWQAAMAWNQINLGTQDYRQLPLFGLGSLSPES ARQRMVGIRRNLELRKSLAGIERTIAHKEGQRPPGKEYQQRLEAYLQWAMLALRLLKVKA S >gi|299857043|gb|ADWS01000021.1| GENE 45 31272 - 31646 56 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|134044628|ref|YP_001101737.1| ## NR: gi|134044628|ref|YP_001101737.1| hypothetical protein YR71pYR1_0043 [Yersinia ruckeri] # 1 124 66 189 189 234 96.0 1e-60 MATLAMKMFEPRLFVSASEKGWFPLSLFVSIPFYFYLSYLLEIEEKRRTFRANVIGFLRG VSEEIRRSTREHRDQGEIRHGGTELGSIDELQRGEAKEPEVISSTSDQKEQGTPKRDKRK IILD >gi|299857043|gb|ADWS01000021.1| GENE 46 31853 - 32071 109 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|118614808|ref|YP_908591.1| ## NR: gi|118614808|ref|YP_908591.1| hypothetical protein P99018ORF_180 [Photobacterium damselae subsp. piscicida] # 1 72 106 177 177 139 98.0 6e-32 MSLNRYANRAGCYPQFREGDEIAIEVTEQRPRKAGAGKGFPSIQVLKASEGVLSEPEQPI EIQKDKRKIILD >gi|299857043|gb|ADWS01000021.1| GENE 47 32409 - 32834 171 141 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|118614807|ref|YP_908590.1| ## NR: gi|118614807|ref|YP_908590.1| hypothetical protein P99018ORF_179 [Photobacterium damselae subsp. piscicida] # 1 141 1 141 141 256 98.0 5e-67 MTRAAMAALLSALVIGLVSDLSAQELVVSQVAIDKSTEVEKEATFHNRKWVLRTGQVSGF FICQGDNKDIYYRHDRVGAHCQKTSTGWRNVLGLRDDVPEVELSVYLGTVEGVPVKVLHQ EVDGYDLKVQYKVARKGSANE >gi|299857043|gb|ADWS01000021.1| GENE 48 32834 - 33181 232 115 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|229516114|ref|ZP_04405564.1| ## NR: gi|229516114|ref|ZP_04405564.1| hypothetical protein VCC_000128 [Vibrio cholerae RC9] # 1 115 5 119 119 224 100.0 1e-57 MSKKRIVIKNGEVCGFADEVSFKGLEVQEYSKTRVSRIVPTSGILMIAFYVIRGLCSDES KIAAWTRVWRCQWKVLIDGKSYGPFSSRADAISFEKDEIYKQGKFFADATHEAAV >gi|299857043|gb|ADWS01000021.1| GENE 49 33193 - 34326 307 377 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|258624183|ref|ZP_05719133.1| ## NR: gi|258624183|ref|ZP_05719133.1| hypothetical protein VMB_04340 [Vibrio mimicus VM603] # 1 377 18 394 394 680 99.0 0 MVAAPAAFASDFVTGVMVGQMLSDDSGSKKVEDTGPESKTVIDYHDGQPVVTKVEAFKSN KWRKLDGPQGGYFVCPGEYRSYSGRLRCRVHDDGLNGFMGGMTDAQELPLQEALTKLEGK PISLQTIEVHGNNLAVKYQLAPPAQTHVKTQDLGVVKQDGEMQKVASQPPALSIETAPKS EPPKQIGAAQDTDRNTSAFQSPFEEVSDSMIGLMDSSFVKVIAGLMLVFGVASGIMRQSP SGIVMGIMPAIMIMTAPTVIRTMFDTGAASTKPVEDSGSSFPFFLVAIVPVLIFFAYRAF MNNRSDSEIDELLREARRAERAERPSNEPPSVDELRERQQQNPEREPVVVSSSAPAPKVQ KEEPIEVQPGKRKIILD >gi|299857043|gb|ADWS01000021.1| GENE 50 34371 - 34565 238 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|134044458|ref|YP_001101732.1| ## NR: gi|134044458|ref|YP_001101732.1| hypothetical protein YR71pYR1_0038 [Yersinia ruckeri] # 1 64 1 64 64 90 100.0 3e-17 MKKVNIKIKGGKIAADFTGFQGKTCEALEQRIRPEELEVEEKELKPEYHFNAGQTQHETE QNEW >gi|299857043|gb|ADWS01000021.1| GENE 51 34614 - 35006 415 130 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|118614804|ref|YP_908587.1| ## NR: gi|118614804|ref|YP_908587.1| hypothetical protein P99018ORF_176 [Photobacterium damselae subsp. piscicida] # 1 130 1 130 130 220 100.0 2e-56 MSHIVKGKVQVAYKDKELLLKALEGVGVVVENEKLYRVGAGYTFEKYPIVLIDQNNKEHR IGYKEKNGVWEQYQENYGSYGRWTQQASSKVQDRYIAFHYEQQLKEEGFSVTVKQHHDGT LELEAEEAVW >gi|299857043|gb|ADWS01000021.1| GENE 52 35068 - 36531 1018 487 aa, chain - ## HITS:1 COG:all1872 KEGG:ns NR:ns ## COG: all1872 COG0464 # Protein_GI_number: 17229364 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Nostoc sp. PCC 7120 # 9 462 3 482 503 219 33.0 1e-56 MSDITQQMDKLEIPIKLSFPVINVSTFELGRAESVFSDIAKKVGKHFIVMPFKKLPDPGT MKAMVDESKKSSKNGVVVFDTFFFDRQRANPETLPALKSSLTYLENEGINYIIAGKDVFN EEFVYHIDLPAMSNQEILKLLQTCEDNVKDGGVFESNERAVIANHALGLSHTQMKNVFTY SAYLKFKGEEYLGEIRKEKAHILRDVGLDVLEAIDIGNVGGLENLKEFLQIRKAGWDKDL PVKGVLLAGVPGGGKSLTAKAAAGVLGTTLVRLDMGRFYSKYLGETERQFNRALQTIEQI APVVVLIDEMEKFFGNADGEHEVSKRLLGSFLYWLQERKKKIFIVATANRVQSLPPELMR AGRWDRAFFIDLPSVAERQKIFEIHLAKQKANIAAFDMPTLLRTTEGYTGAEIEQAVIDA MYLANAQDKELNNEALVDAVTRITPTSETRREDINQIRSLRDQGFYPANNFDVQEQNGSG RKLAIED >gi|299857043|gb|ADWS01000021.1| GENE 53 36605 - 37048 247 147 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|229516106|ref|ZP_04405556.1| ## NR: gi|229516106|ref|ZP_04405556.1| hypothetical protein VCC_000120 [Vibrio cholerae RC9] # 12 147 179 314 314 231 100.0 1e-59 MSSMSNSSASSEIDDAKRAVKAFANALGDHRDIVGSLHHSMATEFIDLGMDFAGLNDGFD FGSVFSLFSLSSASSSLDKVESRVESLMPDLRRAASNSAAEYARVNEEFFGLKQQACCQV HELLVTNGIDVSVKRVESAVNSYRVGR >gi|299857043|gb|ADWS01000021.1| GENE 54 38099 - 38596 354 165 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0032 NR:ns ## KEGG: SNSL254_p_0032 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 165 1 165 165 298 100.0 4e-80 MSMLEARYFVAKISDAQAVLCDEELATLERLIRKVDDGRRANGKSSLTCVVVEEDWPNWQ QTVDSVLSLADGKDNDWTNATPEQIKAFWVDDSVWKTLDGRDKWIEDLDLLVDGSPVASE WEPFGLESGQSVVIRGGWIEGNALSDDGVPLVQAFVAWKQGQDNH >gi|299857043|gb|ADWS01000021.1| GENE 55 38599 - 39087 87 162 aa, chain - ## HITS:1 COG:SMb20554 KEGG:ns NR:ns ## COG: SMb20554 COG4333 # Protein_GI_number: 16264281 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 2 155 15 162 169 103 40.0 2e-22 MSAIISKCGMYRYRLERDVQPEGLVFGYFGVNGSTATATEDDHTVRKWIGFTKVNGGRRF IVGNAFAFRATDVRELATAVDPVGPENEIHLERIIRDADVLVPCWGSRTKLPKSLHVHLD RLLEQLVASGKPVLAFGVTGSGDPKHPLMLGYSTKLVPWGGK >gi|299857043|gb|ADWS01000021.1| GENE 56 39184 - 39519 387 111 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0030 NR:ns ## KEGG: SNSL254_p_0030 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 111 1 111 111 183 98.0 2e-45 MKHVLNIALMAVVVLGLAMLEATNWGYAVLAIPAVIWAKPVLNLLHKLPVLAAAFWILVA VFAWQAALVGILFYGVLATPKAPANTNGKKSRKANLMGTYSYDFKTGECFS >gi|299857043|gb|ADWS01000021.1| GENE 57 39534 - 40004 195 156 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0029 NR:ns ## KEGG: SNSL254_p_0029 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 156 1 156 156 274 100.0 9e-73 MSDLYEPLEFVFCGFRKGDAGLFISVATLRDGVLGREMYFSKGKSKRRWVVGGIYSGASF SDNGAKGLDDAHYVKAWEVQGDKIEWQAKSEQAEALARSEKLEADDRKRNELEELMLPIR KQYGALTKRRDRAGAAALEEAVLRALRAPIRKAEEK >gi|299857043|gb|ADWS01000021.1| GENE 58 39997 - 40368 152 123 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0028 NR:ns ## KEGG: SNSL254_p_0028 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 123 1 123 123 235 98.0 4e-61 MGKKVHIICGKCGSDEMNFVINGHCPDDPQNVASMSCSNCCELTGIAEWSEFNGRELKGE AVALSTPANVNALLGLLRQAMDSVEYRLYGGGMSLSGNDAAELIDLQERAEKVLSVLRSD QHE >gi|299857043|gb|ADWS01000021.1| GENE 59 40379 - 40573 229 64 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0027 NR:ns ## KEGG: SNSL254_p_0027 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 64 1 64 64 117 100.0 1e-25 MDEKITYEEMLEQLDQKGIRVTNGARRLYVALNNGVKAEVLGNCGPATISLVDGMIVVEE QTLH >gi|299857043|gb|ADWS01000021.1| GENE 60 40914 - 41462 322 182 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0026 NR:ns ## KEGG: SNSL254_p_0026 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 182 1 182 182 345 96.0 6e-94 MNNLPLLLDAREAIDYYHQHPDMTDAEKAYVVAFLSGEGRSNSQIREELGIEKVYTVTHL KRAGTLSEEELTLWLRNPRKITLGHVRAVAKLPISKREKLLRDLLHTRTPVHTYEAIAKG KEVDRDADIKRLETLMSDATGRPIKIRYNPAKRSGELTLGFFTLDDLDDVCKALGFDPSE QM >gi|299857043|gb|ADWS01000021.1| GENE 61 41625 - 41975 178 116 aa, chain + ## HITS:1 COG:YPPCP1.09c KEGG:ns NR:ns ## COG: YPPCP1.09c COG4683 # Protein_GI_number: 16082688 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 116 1 115 115 124 53.0 6e-29 MWVIETTDTFDEWFDALDDTDRANVLASMMVLRDRGPMLSRPYADTVNGSSYSNMKELRV QSKGDPIRAFFAFDPKRKGILLCAGNKTGDEKRFYEVMIPIADREFAAHLDKLKKE >gi|299857043|gb|ADWS01000021.1| GENE 62 41980 - 42282 284 100 aa, chain + ## HITS:1 COG:YPPCP1.08c KEGG:ns NR:ns ## COG: YPPCP1.08c COG1396 # Protein_GI_number: 16082687 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 3 100 2 99 99 85 45.0 2e-17 MARTLDQMLATEKPEVVAKAQKAATEMLLNIHLAELRDRMNLTQGEIAASLGVRQPTVSE MEKPGRDLKLSSIKRYVEASGGKLRLDVELPDGTHYGFAV >gi|299857043|gb|ADWS01000021.1| GENE 63 42691 - 42963 255 90 aa, chain - ## HITS:1 COG:YPO3154 KEGG:ns NR:ns ## COG: YPO3154 COG0776 # Protein_GI_number: 16123316 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 90 1 90 90 100 67.0 9e-22 MNKSELIMKVAEDADISKAKAEAAVNALINSVKEVLKAGGTVALTGFGTFHVKERAARTG RNPQTGENIQIAAANIPGFKAGKGLKDSVN >gi|299857043|gb|ADWS01000021.1| GENE 64 43021 - 43548 218 175 aa, chain - ## HITS:1 COG:HI1296 KEGG:ns NR:ns ## COG: HI1296 COG1525 # Protein_GI_number: 16273209 # Func_class: L Replication, recombination and repair # Function: Micrococcal nuclease (thermonuclease) homologs # Organism: Haemophilus influenzae # 28 174 24 157 178 109 40.0 2e-24 MRFGFAKKTGISAFLSAMLVLAPHVWAETFTAKVVGVSDGDTVKVLTEQSCDTGKDCRSG KIQYRVRLAEIDTPEKKQPYGSKAKQALSDLVFGRMIKVEQIDKDRYGRLVANLYVDGKW VNAEMVRSGSAWVYRQYAKTPELFKLETEAKADKRGLWALPESERTPPWEWRRKH >gi|299857043|gb|ADWS01000021.1| GENE 65 43551 - 43742 187 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300925742|ref|ZP_07141600.1| ## NR: gi|300925742|ref|ZP_07141600.1| conserved domain protein [Escherichia coli MS 182-1] # 1 61 39 99 100 108 91.0 1e-22 MRYQVFKTKEGGLPVFTAPWYWLASAIAHWSSLNWDACRIVDSKADKTMLCWAKALPAAK KME >gi|299857043|gb|ADWS01000021.1| GENE 66 43768 - 44625 317 285 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0020 NR:ns ## KEGG: SNSL254_p_0020 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 285 1 285 285 547 92.0 1e-154 MQIRDYMTKLFEAFGDVEEVTREMLLEQAELIHTISDKCQSTGLFLDSQVRFNQFVQEIE ADDNVEDRLLHAWCWVMDRIVKAPTSFHMDGAVILTMPLVARYLPPVEREPETIVVNLDE DYKAPVGNQTLCELIMERRHWPQGATCATQEADGEILYWDAPVQVVEEGRKAAGKHGMMA EIGLKHQVDFWFSDMAETRLATDWNTAVITPHCLLLSYLDVLQKNKVPFDEGVRLAAEWV TQLGGESRKDTEEEPEADATVLSLGRATAHCFKPYPDTQNFYYEA >gi|299857043|gb|ADWS01000021.1| GENE 67 44612 - 44839 95 75 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0019 NR:ns ## KEGG: SNSL254_p_0019 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 75 2 76 76 139 94.0 4e-32 MIIATKSGLLVAAELIKEEAGYWLLQPRDQKTPVRVNKQDDNKRAFTHMGDALRWAGDPE LAKQFDAEGEEHANS >gi|299857043|gb|ADWS01000021.1| GENE 68 44842 - 45360 224 172 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0018 NR:ns ## KEGG: SNSL254_p_0018 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 172 1 172 172 298 98.0 4e-80 MTTNTQNANANQVRSLRDMLVPALLFYVVMTAMFVGLDAFMDKPTSMNLPFMPFLVSMVS FTSDARRAWDWRNGTKVVAVLTAVAMLLAFIYQLAVGEVNLLGVGIYPATAILLLAITWV IRAIGKTAPFQFLGRHLARFGASKWVQRTAAVIVLAGGLAITVYAYWLNHGS >gi|299857043|gb|ADWS01000021.1| GENE 69 45357 - 45803 263 148 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0017 NR:ns ## KEGG: SNSL254_p_0017 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 148 1 148 148 238 97.0 6e-62 MLKRGIINLAASYIIVDALLRNAAIWIFGLSFSIGGTYVAGEASTWGVYLATSGAMTLCS VVTAYLLVTYHRWGLMTARVWLLLSACLNGYAVYLSSHNIQLVVALLSSLFIALWMLKTL EQPAVKGTYKVIADLHRQLWGMLKGQTQ >gi|299857043|gb|ADWS01000021.1| GENE 70 45803 - 46162 121 119 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0016 NR:ns ## KEGG: SNSL254_p_0016 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 119 1 119 119 228 99.0 5e-59 MELQEAKNALDSLHPHKASAPLRLVIHQPGGIGGTPTVGVKAIHAGFDWDSNTILIYPEE QLTRLTPDEVAAITKSVSKGQSWHSYQQFKKYREQLAEATEEINRLRAELGRYQNNGRG >gi|299857043|gb|ADWS01000021.1| GENE 71 46220 - 46648 203 142 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0015 NR:ns ## KEGG: SNSL254_p_0015 # Name: not_defined # Def: putative lipoprotein # Organism: S.enterica_Newport # Pathway: not_defined # 1 142 1 142 142 246 92.0 3e-64 MIKITTKLGCLLAGLLVLSACSSVPQTSNEYTKALDDTKQVCAACALVGNDLLVALNKSC DKPITPETLTSVMNSNSMFAAMMAINSIGGTDLYQVYRDAAIDTLRCNEMDTWPERTKVR FQQPDMQKALALRVSVRQQNAN >gi|299857043|gb|ADWS01000021.1| GENE 72 46682 - 47542 574 286 aa, chain - ## HITS:1 COG:PA0982 KEGG:ns NR:ns ## COG: PA0982 COG1651 # Protein_GI_number: 15596179 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Pseudomonas aeruginosa # 105 271 11 175 182 101 35.0 1e-21 MTEQSTKSLRLGVFAAIILGLVGTGFGIYQLVKEKDLAQEIANVKSTVNQVKDAEGVTFK SKAEFEAAVAESINKFVAQKQQADIDQKYAQFEAAPEKVEDGKHIYGDLGARFTLVEFSD MECPFCKQFHDTPKQIVDASKGNVNWQWKHMPLDFHNPAAHKEALAAECIAEQKGNRGFW VFVNEIFHHSKGNGAGVSDLASVVTGVGADLDAFRECLSSGKHEDKVQADIQKAKSYGVN GTPATFVVDNQTGKSQLLGGAQPAQAIMAVMRKMMIESQQDDSANQ >gi|299857043|gb|ADWS01000021.1| GENE 73 47558 - 48517 391 319 aa, chain - ## HITS:1 COG:PA2973 KEGG:ns NR:ns ## COG: PA2973 COG0616 # Protein_GI_number: 15598169 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Pseudomonas aeruginosa # 4 301 13 305 326 287 49.0 2e-77 MAENKEIPWEKELIEKYMFTLHKEQVKDRRWRTMLRVLRASGFVLLMIGFIILASNPGGM PWQSAKAGAPHTAYINIRGEIAAGTLADADHLIPSIQAAFDNPNSQAVVLRINSPGGSPV QAGRIYEEVKAQRALHPEKKVYAIIDDIGASGGYYIASAADEIYADRASLVGSIGVISSG FGFTGLMDRLGIERRAITSGEHKALLDPFSPLTSDMKKFWEGVLSKTHQQFIERVKAGRG DRLKDAPEVFSGLLWNGEQAKEIGLIDGLGSLNSVARDVIHQSNLVDYTPTEDIIRRLTQ RAKLEASSFVQELSAVKVY >gi|299857043|gb|ADWS01000021.1| GENE 74 48517 - 49371 165 284 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0012 NR:ns ## KEGG: SNSL254_p_0012 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 284 1 284 284 553 98.0 1e-156 MGVVRVPYLLAELKERGCADESALAQVMQPGCRIGEEDLRKLAANLGLEVSELAPAPENA ANTRFKAKLRGGLASFLFEYDGCFRHAEGSSHAEMLGIEQEDDIGLPSRAADAMLLEKML YQVIARAKYMLGKIDSKFVRSEQAIEFREQLAPGIFRPGYRGFRFKEAAAGDLPTVMIDG RKFNCVASIARAHGLDPVTVRRRIADTRKAADKLSNDEWKLILAKKKGKGKPFTYLDRTY SNIAQFCREHQLNTNLVYQKVKDRADSADEEFWGQIIETCKRKD >gi|299857043|gb|ADWS01000021.1| GENE 75 49376 - 49669 267 97 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0011 NR:ns ## KEGG: SNSL254_p_0011 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 97 1 97 97 149 100.0 2e-35 MEKVKSVDAVEFTAADKKAMTHAAYAQCFFILAQVMAFPSLGVAGAMVAALCGMMPWLTK FAKEAPSKAFGMVMASLCLAPVYGKLCELVVHAIQGA >gi|299857043|gb|ADWS01000021.1| GENE 76 49680 - 50060 230 126 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0010 NR:ns ## KEGG: SNSL254_p_0010 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 126 32 157 157 233 99.0 2e-60 MAGGMTLIQFMAWKQQDAVRSRFKAAKDAFEALNVIAFDKHWVGSTATVAKVSNMITPPE RLDKPWAVQVLAVTKGGTWFAVDLQVTGTDKVQMLSLHQLSEKAAKTMLAFDLEVYEKFF GKPDVA >gi|299857043|gb|ADWS01000021.1| GENE 77 50250 - 50771 167 173 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0009 NR:ns ## KEGG: SNSL254_p_0009 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 173 1 173 173 339 98.0 3e-92 MKAVLWIFVLIIAPFVIAKVDQWRKRGIGDTWAWWKSENMPYELRSATLFLSEQDISTTQ PVPMHGRVDQVYKAKNGVLIPLDTKLRQVNHIYESDIIQLSVYRVILSHKYKAPVAKYGY VRTVVETADGDRVRYIKTNLLSEKEVVKLWHRYQSIRSGQVKTSCSCGGKFHM >gi|299857043|gb|ADWS01000021.1| GENE 78 50774 - 51295 233 173 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0008 NR:ns ## KEGG: SNSL254_p_0008 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 173 1 173 173 335 97.0 4e-91 MEFDYDKSVSNAHLEAAGWGMDAFNHSNPFESHVIYVRDYRNDHIRLFTIKKADFDTIKL PLHLTSDMLASVIAEFVSKAAKGKLNTKESDTLAPALVGYAKSTETYRSWRRVSGTTERL HMVINIYAGSGLLRPFIARAPETVLTTQELLVFSSQVKNMDVSNHPEWFRGLR >gi|299857043|gb|ADWS01000021.1| GENE 79 51300 - 51908 391 202 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0007 NR:ns ## KEGG: SNSL254_p_0007 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 66 202 1 137 137 281 97.0 8e-75 MKTIKRFIVWVNYGLEGWSIFGSSDDWDEAVSIRSEAIDECNIDEEDIILAENKNELVVK PAAKQMTEWHRELEAVLMTLDDCQMECDGMTWAVSHLLNDAGVPHDCMYGFVRNEQTKDI VTPHFWVVLDDGWLVDLRLRMWLGDHDNIPHGVFHPDNEPGFFYKGDPVQNHKGMRLGKA VLDIMTDGKISHVKVPERQDGE >gi|299857043|gb|ADWS01000021.1| GENE 80 52407 - 52592 122 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGVAIGIVFEHFALKAALKPREVHWDTQFFPELTTVITHEGPIHQRTTFLTINIMVPELH L >gi|299857043|gb|ADWS01000021.1| GENE 81 53001 - 53291 163 96 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0006 NR:ns ## KEGG: SNSL254_p_0006 # Name: not_defined # Def: phosphoadenosine phosphosulfate reductase family protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 96 232 327 327 201 100.0 5e-51 MTCIYNSQRIWSTIRHYWPERAGKIAQYEQTFGVTVSRKKIDVIDLGSAVAPIQISDVEA LEQVSREDYTLPIFVPEGQKWVLPGGAFGREACGSD >gi|299857043|gb|ADWS01000021.1| GENE 82 53353 - 53742 183 129 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0005 NR:ns ## KEGG: SNSL254_p_0005 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 2 129 17 144 144 167 97.0 1e-40 MVLVRRSSRKGMDLELTWLQSLKVVLVRGAVALGLGFGIGRLVLMGMQYGFLSESVLREH ALVSVAVVLICGLGSFVAFHWIIGRISGRSISVVSVIKAVVYESGYFVLSMLILLVILVL FGLAYETFL >gi|299857043|gb|ADWS01000021.1| GENE 83 54779 - 55843 616 354 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0003 NR:ns ## KEGG: SNSL254_p_0003 # Name: repA # Def: plasmid replication protein RepA # Organism: S.enterica_Newport # Pathway: not_defined # 1 354 1 354 354 700 99.0 0 MSKRTKDKDLEKLDVIKDSPQMSLFEIIESPAKKDDYSNTIEIYDALPKYIWDQKREHED LSNAVVTRQCTIRGQHFTVKVKPAIIEKDDGRTVLIYAGQREEILEDALRKLAVNGKGHI IEGKAGVMFTLYELQKELSKMGHGYNLNEIKEAIQVCRGATLECISDDGEAFISSSFFPM VGLTTRGEFRKKGGNARCYVQFNPLVNESIMNLSFRQYNYKIGMQIRSPLARYIYKRMSH YWTQASPDSPYTPSLISFLTQSPRELSPRMPENVRAMKLALEALIKQEVISDYDANQIKD GRRVIDVRYVIRPHENFVKQVMASNKRKQQTELRAIKQGMIDHDIIDEPQRKGR >gi|299857043|gb|ADWS01000021.1| GENE 84 55864 - 56151 200 95 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0002 NR:ns ## KEGG: SNSL254_p_0002 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 95 1 95 95 142 100.0 5e-33 MTASVAATELAKLGKCEAMIKKVASHPRPALSKRPQSPQGTDSTLRGEFAHFRYEAAALR FMSGTAGAKRRIYQLVFSATVAAGALTMLAAWTTS >gi|299857043|gb|ADWS01000021.1| GENE 85 56156 - 56695 226 179 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0001 NR:ns ## KEGG: SNSL254_p_0001 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 179 1 179 179 295 100.0 7e-79 MSLPTERWLDLLDPKLEEERSEITEDLLEAEGREFVAEVRSKLDHALAVLAVEAQQEADM YWNAHKSAREEASEDEQGRVGTRVRILGVSLVAEWYRNRFVEQVPGQKKRVLSTHIKKGR GHAYSMSHFKKEPVWAQELIQQVETRYAVLRQRATALAKIRRALNEYERQLNKTHSDEV >gi|299857043|gb|ADWS01000021.1| GENE 86 57194 - 58177 581 327 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0198 NR:ns ## KEGG: SNSL254_p_0198 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 327 1 327 327 620 99.0 1e-176 MSQFVLGLDIGYSNLKMAMGYKGEEARTVVMPVGAGPLELMPQQLTGGAGTCIQVVIDGE KWVAGVEPDRLQGWERELHGDYPSTNPYKALFYAALLMSEQKEIDVLVTGLPVSQYMDVE RREALKARLEGEHQITPKRSVAVKSVVVVPQPAGAYMDVVSSTKDEDLLEIIQGGKTVVI DPGFFSVDWVALEEGEVRYHSSGTSLKAMSVLLQETDRLIQEDHGGAPGIEKIEKAIRAG KAEIFLYGEKVSIKDYFKKASTKVAQNALIPMRKSMREDGMDADVVLLAGGGAEAYQDAA KELFPKSRIVLPNESVASNARGFWFCG >gi|299857043|gb|ADWS01000021.1| GENE 87 58489 - 58908 167 139 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0196 NR:ns ## KEGG: SNSL254_p_0196 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 139 1 139 139 204 100.0 6e-52 MKDHEEFSTLSAAERRELIIAELKRKSRIRTLLRGLPLDEVREIIDRMKGVLNELEEEYK KREEEEKEKRAQAERIMSDMESCGVDIGLLNEMFTSRSEPDNAKYSKDGVSWSGQGRRPD AFKGLGAVELERYRIPQKK >gi|299857043|gb|ADWS01000021.1| GENE 88 58968 - 59282 106 104 aa, chain - ## HITS:1 COG:no KEGG:SeHA_C1597 NR:ns ## KEGG: SeHA_C1597 # Name: not_defined # Def: putative regulator protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 90 83 172 180 176 90.0 2e-43 MQLYFNIGGEAVLRSVNIKALNKAFRMYHAIRKEVPGMKGARWAPFDITDAWCLASELRS GDAMLEVCDNCKCTYFTSVNQRTCVECPFCKEQGRHGGGEKECA >gi|299857043|gb|ADWS01000021.1| GENE 89 59516 - 60181 399 221 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0193 NR:ns ## KEGG: SNSL254_p_0193 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 20 221 1 202 202 386 100.0 1e-106 MVAESWLSIATFVICEGGGMLELDIIGAWDARAVNLDQEEADRNVYEFDLTLWNLLSTLA KERPDDAASQFSLGMDTVQKLSLATPSQLEALASGVLISFKLETAEQNIITRLSGDYDPV VFINHSVDEFDAAYWLLFNRVASRDPEMAKEVFGVSRELAELVAKATDSQLRHMSGTTVT HFTLRFAPSIIEEILDDSREELTHPVLKKLQQSLQGRGRWR >gi|299857043|gb|ADWS01000021.1| GENE 90 60135 - 60668 195 177 aa, chain - ## HITS:1 COG:SMc03045 KEGG:ns NR:ns ## COG: SMc03045 COG0741 # Protein_GI_number: 15964430 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Sinorhizobium meliloti # 13 169 15 169 188 66 29.0 2e-11 MKNKAKALVLSAALLSSTANAIDLSGTIFDKAAKAYNLDPLLVYSVALAESASGRGNGSI SPWPWTLRVPGLPFYAKSEDQAKAKLAEFQQQYGRAIDVGFMQVSIRWNGHRVSSPADLL DPETNVMVGAEVLSEAIQSSPNDLELGVGRYHAWEDEIRARNYGSRVLAIYRNLRDL >gi|299857043|gb|ADWS01000021.1| GENE 91 60668 - 60940 127 90 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0191 NR:ns ## KEGG: SNSL254_p_0191 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 90 1 90 90 155 100.0 4e-37 MDKCQLIDIPSDPEKKREWIKYKLKIQGLSLAALGRKHKTSRQVVSTALYKPSPRWEHEI ATALGVKPSEIWPERYDEEHEIPLRHKEAS >gi|299857043|gb|ADWS01000021.1| GENE 92 61656 - 62018 103 120 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0190 NR:ns ## KEGG: SNSL254_p_0190 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 120 1 120 120 228 100.0 6e-59 MKHVVNILLLGMVLLGIAMMADTPWGLGVALAPFGVWGARFLFLVHKSLWAAVIFWGGIA YFQWQVALVVGALFGLTCFIRVARSAYKEAPPTRRRKKQTGGFQDSYDFDQRFHIGAGDE >gi|299857043|gb|ADWS01000021.1| GENE 93 62056 - 65670 1300 1204 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0189 NR:ns ## KEGG: SNSL254_p_0189 # Name: traG # Def: type IV conjugative transfer system protein TraG # Organism: S.enterica_Newport # Pathway: not_defined # 1 1204 1 1204 1204 2042 100.0 0 MGSFSIHSIGDSAFLEQILIAVSMITGTGDFEKMVSIGLLLGVLMICIQSVFQGAKQINL QQVLVGWILYACFFGPTTTVTIEDAYTGQVRVVANVPIGVGFAGGVISNVGYTITNLFET GYGVIVPNVTESHFSETLKLLNDVRRRAYDTGVFTALNSANGGGYVDVRRSWNNYIRECT LTKVDLNLMSLDELMNRSTDSALRFNSQLYGTRLYLSTANPDGADYTCTDGWVAISTATA NLSSPVVVDALNSLLGIDTSTGDNALTKLTDSLQAMGATTTSSIDYLKAAVLEPLYYEAA AGRYQDLQDYGSALMVNQAIQQRNTQWAAEQSMFMTVVRPMLTFFEGFIYAITPIIAFII VMGSFGLQLAGKYVQTILWIQLWMPVLSIINLFVHTAASNEMSSLSAGGLNSMYALSSTG DVLQHWIATGGMLAAATPVISLFIVTGSTYAFTSLASRISGSDHVDEKMQTPDLLKQGPV MQSQPAYNHNQFSGAIANGAESMISTFSLGSTLASGVSSAQALQSQKSEAFQSTLGRGFS DGVSQDQAYSRLSNVGRNVSSQNTAQSQLINQQAKNFMDKFQVDDSHSDAVKGAFAMQAM GTLDVDEAASMLMPMVGKARAAMKAAAGVKSNSTALVPAGGNGESGGGSDVLDIKAQAKG ATESSTQDSSSWSASDVSQFMKGVSYSQTDSQALTNQLAQGFSRSGSESFKQTWGDSLSQ NLSKSASELVSASDTFTTMSQLQNQMGSMTNTDFKTLGGAVAQTPAAMNQLNDYFRNAAP QSVKDEAASLQQRYQAYGMSPQVAQAAARMTAMTNSKNYEQGKELGGYQAALQAINTASG RNGAFSGDAYGNNGIEGPNVQGLPGQVQGAVGSGPNIPTGFRENVAGMAGTNPASEAGQL PTNSPLVQNEHAAGTSALHNQAQQTERNVSAPELKKAQDNLMNSLPEMSWSASAWGAWDN SSDWMGRRAEQAGGALIAGGQAGADAFSRAMDQMRTMTPEQRDQFIAATQRGDQAVQEEF GWAGDAMVGMAKLGRNVMGAAASGYDAAKEWLTGKSDLSEAAKGMSIEERGAFYAAALSS AAEAGGGAAQQFMNQYGDEFKETMQSIAQSRYGLTESQAAVYAESFDTNEGRMNQAVQNL KMEYAERNPDGSPMMQGGQPVLSQQNEEFTDKLVNVLQNSTEAGDRSGSYLTAVRGYNIA NQRF >gi|299857043|gb|ADWS01000021.1| GENE 94 65683 - 67116 693 477 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0188 NR:ns ## KEGG: SNSL254_p_0188 # Name: traH # Def: type IV conjugative transfer system protein TraH # Organism: S.enterica_Newport # Pathway: not_defined # 1 477 1 477 477 897 100.0 0 MVTHKTLKRSLLALSVAASLVMAPTGAIAANGLQSQMDKLFNEMSNTTPPGVYESQRRGV LAGGRFTAKTRIFDENLVSFAPPSWKAGCGGVDLFGGSLSFINADQIVQLLRAVAANAKG YAFQLALDNVFPDGAKWIENFQKKVQALNQHLGNSCQLAQGFVNDLTSGMDLKHKTDASI TATTSGLYEDFFGSKQETSGKSPLEELKANKPDEYNKMIGNIVWKQLKSNNANTWFQYGD NTLLEAIMSLTGTVIIGDLVNDPNSTGTGAKTTPLTTLPGNKITLSDLISGGSVEIYSCD SDTTNCLSAGSSNKTVVLKGIKNQITDMLLGTSSTPGVIYKYATNSGTLTDPEKAFVSNL PGGIGTIVRNLSVLSQDGANLFATESSGAIALTMMYSFSEEFFRAARIAMANSKSPYKKE ALELLAQSQQQIRAEYTILSSQYGDLASQIEKYNNLLDNIRKQKYMLATLSNPPSTN >gi|299857043|gb|ADWS01000021.1| GENE 95 67118 - 67891 375 257 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0187 NR:ns ## KEGG: SNSL254_p_0187 # Name: traF # Def: type IV conjugative transfer system protein TraF # Organism: S.enterica_Newport # Pathway: not_defined # 1 257 86 342 342 504 100.0 1e-142 MFSAEWFRENLPKYKDLAWNNPTVENVRTFLYLQRFAIDRSEQFSDATELAVVGDPFLDE ITRRPAATFASQQVDRDAGNAKNMLLKSVAERVGIFFFYKSDDDYSDLQAPLIKMLEQGE GFSIIPVSMDGKPLPSGLFPHYKTDEGHAKQLGIVTFPAVYLASPDGQFAPIGQGPMSLP ELNHRILVAAKRNGWVTDEEFNRTRPVLNLENNIAERLASPELGSDLKQLSQASGDKDNF VPPEQLMKYIRDKLQEN >gi|299857043|gb|ADWS01000021.1| GENE 96 68269 - 69780 405 503 aa, chain - ## HITS:1 COG:SPBC336.01 KEGG:ns NR:ns ## COG: SPBC336.01 COG0210 # Protein_GI_number: 19112913 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Schizosaccharomyces pombe # 8 471 274 777 878 182 31.0 2e-45 MKQLPPDTPEQSLITQYKGPRLVVKVYAGTGKTTTLVKYAHNNLDSRILYLAYNRAIRDE AREKFPANVDCKTSHQLAYATIGRGYQHKLSGNLRLTDIAQAVNTKNWTFAKDILDTLNA FMCSADMRILYTHFARADTGKVLTSKQERYQIQVVEGAELIWKRMTNVQDPFPTVHDCYL KQYQLGMPNLSRRYTTILFDEAQDANPVTSSIVLQQNCKVILVGDRHQQIYRFRGANNAL DSKELMNADQLYLTHSFRFGPNVSLVANALLELKGETRPVVGRGPADQVLMFLPGDVGHR AILHRTVMGVIETALSATESGAQVFWVGGIDAYQINELQDLYWFSMAEPDRVKNKKLLDE YEDYFEYQEVAKATKDPEMMRAVKIINSYDEIPERLTTLRRNTVKEEFGADITVSTAHRC KGLEWDFVQLYDDFPDVLDPELDPMARDDEINLLYVASTRAMRILALNSAVEMVIRYITQ KRMVEKQMKMAAEATEVEEDTTK >gi|299857043|gb|ADWS01000021.1| GENE 97 69789 - 70067 93 92 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0185 NR:ns ## KEGG: SNSL254_p_0185 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 92 1 92 92 155 100.0 3e-37 MARKAKYSEEWRHRAAALQTKIEEAMTLATSSIGDYRWLHRLHSWVTEVAQGKAPDWWTD LDCEVSLPREEKRISTFLSTQKKRITLQMCLS >gi|299857043|gb|ADWS01000021.1| GENE 98 70067 - 71107 808 346 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0184 NR:ns ## KEGG: SNSL254_p_0184 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 346 1 346 346 366 100.0 1e-100 MARKLVEFDDVAAAAQKLKDAGKRPTVIAIRDIIGKGSFTTISTYLKQWSEEHSLDEELV EVVLPESVMSDAELFLQKIYTVAKASADEQLERERELLRQKEIEYQEDMQQAVDMANDAT ERAELLEEQLEALTNKKSELDAALGKAENSLSLKSAELERSLADIDKLEKRIVELEGKLE AKAADLTRAQDHLEQAKSENRSLSQKLATTEGELEEQKGKSIEQTEKLRAAQEQKTSLKE QLENVQAKLAQSQDSLATAKAHGESAERECQRLSGEVEKLDAKLSSAEAEARALVQDKGM MAGQLQEKDQQAKSLEQRLNDALTKISGLEQELAKAGKGGKKKEEN >gi|299857043|gb|ADWS01000021.1| GENE 99 71260 - 71460 158 66 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0183 NR:ns ## KEGG: SNSL254_p_0183 # Name: not_defined # Def: DNA replication terminus site-binding protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 66 226 291 291 127 98.0 1e-28 MANVMAAGVLKTVTAPMPLIVLQDKDVQLKLLRNFDASEQRKTRSDKAASEILGTFGGVT IESFPG >gi|299857043|gb|ADWS01000021.1| GENE 100 72452 - 72943 189 163 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0182 NR:ns ## KEGG: SNSL254_p_0182 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 163 1 163 163 322 100.0 3e-87 MTEQSYGESLKFFSDWQKDPAKRTGLNVQHTLTRGEYPTVSIEIAPIRASGSSPDWKSKI TVQLTRGELTAFCSVLFGLRSKAEGSYHGDAKNKSFAVYNNGKAGVAIILSERGNQLQNF INDDDRMELAVFAVRQLSNAWKVTPSDAIALLRQSAWMDRNLS >gi|299857043|gb|ADWS01000021.1| GENE 101 72940 - 73230 109 96 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0181 NR:ns ## KEGG: SNSL254_p_0181 # Name: not_defined # Def: putative exonuclease # Organism: S.enterica_Newport # Pathway: not_defined # 1 96 194 289 289 167 100.0 1e-40 MLRQTASAFGDQLSWWQEQNCLCAMKLAADAFGSTNRHGTISLADATCEAGVSWKGRAHS AATDAIATADLVTEIAKVQRDLVVQLQELQSKGNLE >gi|299857043|gb|ADWS01000021.1| GENE 102 73814 - 74557 254 247 aa, chain - ## HITS:1 COG:alr7203 KEGG:ns NR:ns ## COG: alr7203 COG0582 # Protein_GI_number: 17233219 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Nostoc sp. PCC 7120 # 13 244 82 312 319 157 38.0 2e-38 MAVLEMLGDAGKAPATINTYLSALKGVALEAWTMKQIDTDSFQHIKQVRSVRGSRLPKGR ALERHEIRSLFFTCESDSSAKGLRDAAILGVLLGCGLRRSEIVALDMGSMIYKDRALKVL GKGNKERMAYVPGGAWKRLDKWVEEVRGTHEGPLFPRIRRFDDVTGERMSDQAIYHILET RRVEAGLEMFAPHDLRRTFASSMLDNGEDIVTVKDAMGHSSIATTQKYDRRGDERLKRAS QRLDIAD >gi|299857043|gb|ADWS01000021.1| GENE 103 74827 - 75363 227 178 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0179 NR:ns ## KEGG: SNSL254_p_0179 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 178 1 178 178 370 100.0 1e-102 MLSKKVFFISQAEAERLEPVPGAAMISITDPDKSPAALGQWGQLYRDSFYDGGYSENTIH TMKAAFRMNYASYIDSSQAEKLSTFLDGLVGSGIDQIFVHCYYGESRSGAVALYLQNKHG FTPNKPITKPNRTVYELLCNPTKFEPLMQSYETQHMEEELPLHLKIWDFLLVAVGLRR >gi|299857043|gb|ADWS01000021.1| GENE 104 75356 - 75643 103 95 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0178 NR:ns ## KEGG: SNSL254_p_0178 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 95 1 95 95 191 98.0 8e-48 MLNKNKFEKVLKRILDKNFERCSICRKPFPGPCHTFAGLDSDNKVQNVGSCCRTSIVDLR HGGVYTTAPVDTQEGQSQAHELLATHPCKGMMGHA >gi|299857043|gb|ADWS01000021.1| GENE 105 75662 - 75943 271 93 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0177 NR:ns ## KEGG: SNSL254_p_0177 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 93 1 93 93 174 100.0 7e-43 MIFDVRATFEVALQTDTHLVLIDLDQGASVTNDADAVIAWLAANLEGGIGKRKVYYRDTD GRFDELKVNAGAFAGFAPCSEGQQTTLAGMLGQ >gi|299857043|gb|ADWS01000021.1| GENE 106 76213 - 76815 326 200 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0176 NR:ns ## KEGG: SNSL254_p_0176 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 200 1 200 200 407 100.0 1e-112 MYKSLEDLMAGIYEMAAPDGIICNEVSKFLAANQVKPEDISSGIWFFLWLKSAPKDAKPI QKEIPGFGVVLNMPTYGGTLNEAITGLIENECRQIELAEGHPSLEAWVESVLAGRDDGEE NEAAANIVDLLNGCHDLLDTAIINYLFKVGKINEQEILSLIYYGELCDHSLVGTPFSTLH IPSENNVHERNIIPIKKGAS >gi|299857043|gb|ADWS01000021.1| GENE 107 76831 - 77253 147 140 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_p_0175 NR:ns ## KEGG: SNSL254_p_0175 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 79 140 1 62 62 125 100.0 6e-28 MAAAASCSSVYAATLPTSEVDAYILAMNTMSPITAKYTIQYKQAVEQKCNTALSVEQLNS KAFTNVVQAMVSSETVDRMGLDAAGGSLQDTLSVIGKNVTCSDLNAPFKALLDDKDFTRK HQHLSKVLHTWNEVVSQSKP Prediction of potential genes in microbial genomes Time: Sun May 15 22:27:17 2011 Seq name: gi|299857042|gb|ADWS01000022.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont21.1, whole genome shotgun sequence Length of sequence - 68346 bp Number of predicted genes - 67, with homology - 67 Number of transcription units - 36, operones - 9 average op.length - 4.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 276 - 304 1.0 1 1 Tu 1 . - CDS 320 - 730 183 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 865 - 924 7.1 + Prom 914 - 973 6.9 2 2 Op 1 . + CDS 1065 - 1238 105 ## ECDH10B_1224 hypothetical protein 3 2 Op 2 . + CDS 1240 - 1584 354 ## EcSMS35_1978 hypothetical protein 4 2 Op 3 . + CDS 1594 - 1923 451 ## ECO111_1498 hypothetical protein + Term 1937 - 1973 5.2 5 3 Tu 1 . - CDS 1980 - 4010 1127 ## COG3468 Type V secretory pathway, adhesin AidA 6 4 Tu 1 . - CDS 4418 - 4627 133 ## EC55989_1260 conserved hypothetical protein; putative exported protein - Prom 4680 - 4739 6.5 - Term 4896 - 4930 -0.1 7 5 Tu 1 . - CDS 5027 - 5245 129 ## c1611 hypothetical protein - Prom 5274 - 5333 6.7 8 6 Tu 1 . - CDS 5377 - 6900 535 ## COG2200 FOG: EAL domain - Prom 7138 - 7197 4.4 - Term 7089 - 7120 1.8 9 7 Tu 1 . - CDS 7232 - 7408 253 ## B21_01150 hypothetical protein - Prom 7505 - 7564 4.9 10 8 Tu 1 . - CDS 7593 - 7859 243 ## B21_01149 hypothetical protein - Prom 7879 - 7938 3.7 - Term 8055 - 8097 3.3 11 9 Tu 1 . - CDS 8203 - 8439 231 ## ECO103_1265 hypothetical protein - Prom 8562 - 8621 6.5 + Prom 8521 - 8580 6.8 12 10 Tu 1 . + CDS 8753 - 9964 583 ## COG2200 FOG: EAL domain + Term 9974 - 10030 2.4 + Prom 10043 - 10102 6.2 13 11 Tu 1 . + CDS 10169 - 10900 365 ## COG0789 Predicted transcriptional regulators + Prom 10932 - 10991 2.6 14 12 Tu 1 . + CDS 11121 - 11525 180 ## COG5562 Phage envelope protein + Term 11743 - 11773 1.8 - Term 12588 - 12624 7.2 15 13 Tu 1 . - CDS 12647 - 13897 1554 ## COG0538 Isocitrate dehydrogenases - Prom 14012 - 14071 4.4 + Prom 14018 - 14077 6.5 16 14 Op 1 3/0.583 + CDS 14099 - 14722 468 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 17 14 Op 2 6/0.167 + CDS 14732 - 15193 446 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 18 14 Op 3 4/0.500 + CDS 15247 - 16353 1308 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 19 14 Op 4 9/0.000 + CDS 16389 - 17030 735 ## COG2915 Uncharacterized protein involved in purine metabolism 20 14 Op 5 4/0.500 + CDS 17034 - 18404 1659 ## COG0015 Adenylosuccinate lyase + Term 18414 - 18457 9.1 + Prom 18454 - 18513 5.8 21 15 Op 1 40/0.000 + CDS 18572 - 19243 838 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 22 15 Op 2 2/0.833 + CDS 19243 - 20703 1206 ## COG0642 Signal transduction histidine kinase 23 16 Tu 1 . + CDS 20779 - 21900 1307 ## COG2850 Uncharacterized conserved protein + Term 21922 - 21948 -0.7 24 17 Tu 1 . - CDS 22046 - 23275 1533 ## COG2195 Di- and tripeptidases - Prom 23382 - 23441 5.9 + Prom 23399 - 23458 4.0 25 18 Op 1 30/0.000 + CDS 23543 - 24661 1182 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 26 18 Op 2 36/0.000 + CDS 24675 - 25502 980 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 27 18 Op 3 25/0.000 + CDS 25499 - 26293 847 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 28 18 Op 4 . + CDS 26290 - 27336 1425 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 27341 - 27383 7.7 29 19 Op 1 . + CDS 27394 - 27855 154 ## ECO111_1399 putative inner membrane protein 30 19 Op 2 . + CDS 27930 - 28640 415 ## ECO103_1166 putative inner membrane protein 31 20 Op 1 5/0.250 - CDS 28779 - 29600 675 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 32 20 Op 2 5/0.250 - CDS 29616 - 30527 833 ## COG1940 Transcriptional regulator/sugar kinase 33 20 Op 3 23/0.000 - CDS 30556 - 31794 1286 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 34 20 Op 4 23/0.000 - CDS 31800 - 32501 226 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 35 20 Op 5 . - CDS 32494 - 33693 1278 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component - Prom 33719 - 33778 4.4 + Prom 33767 - 33826 2.5 36 21 Tu 1 . + CDS 33955 - 35028 1012 ## COG4763 Predicted membrane protein + Prom 35032 - 35091 2.7 37 22 Tu 1 . + CDS 35156 - 38602 3774 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) + Prom 38667 - 38726 4.9 38 23 Tu 1 . + CDS 38749 - 39708 821 ## COG1376 Uncharacterized protein conserved in bacteria + Term 39770 - 39803 0.8 - Term 39713 - 39752 10.2 39 24 Tu 1 . - CDS 39791 - 40048 265 ## ECO103_1157 hypothetical protein - Prom 40157 - 40216 9.8 + Prom 40093 - 40152 10.0 40 25 Tu 1 . + CDS 40211 - 40921 467 ## COG1309 Transcriptional regulator + Term 40968 - 41004 -0.4 - Term 40921 - 40960 3.1 41 26 Tu 1 . - CDS 40983 - 41522 572 ## COG3134 Predicted outer membrane lipoprotein - Prom 41583 - 41642 2.2 - Term 41637 - 41682 3.9 42 27 Tu 1 . - CDS 41749 - 43053 1267 ## COG1252 NADH dehydrogenase, FAD-containing subunit - Prom 43093 - 43152 5.2 - Term 43392 - 43448 1.2 43 28 Op 1 2/0.833 - CDS 43453 - 43995 612 ## COG3150 Predicted esterase 44 28 Op 2 5/0.250 - CDS 44018 - 45043 1074 ## COG1472 Beta-glucosidase-related glycosidases 45 28 Op 3 6/0.167 - CDS 45054 - 45851 275 ## COG0510 Predicted choline kinase involved in LPS biosynthesis 46 28 Op 4 6/0.167 - CDS 45859 - 46500 606 ## COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) 47 28 Op 5 4/0.500 - CDS 46514 - 46891 160 ## COG5633 Predicted periplasmic lipoprotein 48 28 Op 6 . - CDS 46894 - 47253 479 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases + Prom 47431 - 47490 4.2 49 29 Tu 1 . + CDS 47587 - 49776 2072 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid + Term 49794 - 49823 2.8 - Term 49781 - 49811 3.0 50 30 Tu 1 . - CDS 49836 - 51269 1590 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 51364 - 51423 5.6 51 31 Op 1 10/0.000 - CDS 51564 - 52361 777 ## COG0084 Mg-dependent DNase 52 31 Op 2 22/0.000 - CDS 52372 - 53376 730 ## COG0470 ATPase involved in DNA replication 53 31 Op 3 10/0.000 - CDS 53373 - 54014 766 ## COG0125 Thymidylate kinase 54 31 Op 4 6/0.167 - CDS 54004 - 55026 1063 ## COG1559 Predicted periplasmic solute-binding protein 55 31 Op 5 5/0.250 - CDS 55029 - 55838 497 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 55858 - 55917 2.9 - Term 55905 - 55932 -0.1 56 32 Op 1 27/0.000 - CDS 55958 - 57199 1221 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 57220 - 57279 1.9 - Term 57238 - 57278 9.2 57 32 Op 2 22/0.000 - CDS 57287 - 57523 407 ## COG0236 Acyl carrier protein - Prom 57562 - 57621 4.9 - Term 57679 - 57705 -0.6 58 32 Op 3 26/0.000 - CDS 57734 - 58468 252 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 59 32 Op 4 14/0.000 - CDS 58481 - 59410 1000 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 60 32 Op 5 16/0.000 - CDS 59426 - 60379 898 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 61 32 Op 6 14/0.000 - CDS 60447 - 61487 577 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 62 32 Op 7 20/0.000 - CDS 61598 - 61771 292 ## PROTEIN SUPPORTED gi|15801206|ref|NP_287223.1| 50S ribosomal protein L32 63 32 Op 8 . - CDS 61823 - 62344 466 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein - Prom 62489 - 62548 5.4 + Prom 62319 - 62378 3.1 64 33 Tu 1 . + CDS 62504 - 63127 442 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 65 34 Tu 1 . - CDS 63239 - 64198 187 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit - Prom 64299 - 64358 3.6 66 35 Tu 1 . + CDS 64771 - 67956 3070 ## COG1530 Ribonucleases G and E + Term 67977 - 68008 3.2 - Term 68068 - 68110 9.1 67 36 Tu 1 . - CDS 68152 - 68346 222 ## COG1344 Flagellin and related hook-associated proteins Predicted protein(s) >gi|299857042|gb|ADWS01000022.1| GENE 1 320 - 730 183 136 aa, chain - ## HITS:1 COG:ECs3515 KEGG:ns NR:ns ## COG: ECs3515 COG3468 # Protein_GI_number: 15832769 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 23 136 1458 1571 1571 220 97.0 6e-58 MNPLVWCLRADVAAELRSLRRYYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEIE PCLKAAVRKEFVDDNRVKVNSDGNFVNDLSGRRGIYQAGIKASFSSTLSGHFGVGYSHGA GVESPWNAVAGVNWSF >gi|299857042|gb|ADWS01000022.1| GENE 2 1065 - 1238 105 57 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_1224 NR:ns ## KEGG: ECDH10B_1224 # Name: ymgI, ECK4403 # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 57 1 57 57 74 100.0 1e-12 MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIEDEIIVCATYLIPDI >gi|299857042|gb|ADWS01000022.1| GENE 3 1240 - 1584 354 114 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_1978 NR:ns ## KEGG: EcSMS35_1978 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 114 1 114 114 110 100.0 1e-23 MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGA VTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK >gi|299857042|gb|ADWS01000022.1| GENE 4 1594 - 1923 451 109 aa, chain + ## HITS:1 COG:no KEGG:ECO111_1498 NR:ns ## KEGG: ECO111_1498 # Name: ymgD # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 109 1 109 109 195 100.0 3e-49 MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNA SVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK >gi|299857042|gb|ADWS01000022.1| GENE 5 1980 - 4010 1127 676 aa, chain - ## HITS:1 COG:b1170 KEGG:ns NR:ns ## COG: b1170 COG3468 # Protein_GI_number: 16129133 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 334 652 5 323 338 580 94.0 1e-165 MAKGEITTHGTESYAAYANGTVVKAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTV SFNQGEIYTTGPDAATAKIYNGGTVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSS LRSANEILYHKNETSNVTITDSEVSSAADVFINNIKGHLTVDATNSKITGSANISTDVNT HTYLSLSDNSTWDIKADSTVSNLTVDNSTVYISRADGRDVEPTRLTITENYVGNNGVLHL RTELGDDNSATDKVVIDGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSR IFAGAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSAPTVAPTPVLRLEAGSYVA NLAAANTLFVMRLNDRAGEMRYIDPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRY VSQLGAELLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSVRGYCAGLYATWFA DDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAK YTWIFQPQAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDD FEPFVEMNWIHNSKDFAVSMNGVKVEQDGASNLGEIKLGVNGNLNPAASVWGNVGVQLGD NGYNDTAVMVGLKYKF >gi|299857042|gb|ADWS01000022.1| GENE 6 4418 - 4627 133 69 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1260 NR:ns ## KEGG: EC55989_1260 # Name: not_defined # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_55989 # Pathway: not_defined # 1 69 1 69 69 128 100.0 8e-29 MKLKKLSGFSLGLIALAVGNAYAEQFIQHDEYKHAVAIKDGKVKDIDNALVITTGNGSYG YPLQERVAS >gi|299857042|gb|ADWS01000022.1| GENE 7 5027 - 5245 129 72 aa, chain - ## HITS:1 COG:no KEGG:c1611 NR:ns ## KEGG: c1611 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 72 13 84 84 108 97.0 5e-23 MNNSNNLDYFTLYIIFSIAFMLITLLVILIAKPSTGLGEVLVTINLLNALVWLAINLVNR LRERLVNHRDQQ >gi|299857042|gb|ADWS01000022.1| GENE 8 5377 - 6900 535 507 aa, chain - ## HITS:1 COG:ycgG_2 KEGG:ns NR:ns ## COG: ycgG_2 COG2200 # Protein_GI_number: 16129131 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 237 507 1 271 271 551 99.0 1e-156 MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAV NIAGKECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLL LAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNVPLKGVRYVLRVADDIIGPTG DVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAAFLLD RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFI PLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRD SFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHID YIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG YYFYKPVTYIDLVKIILSKPKVKVVVE >gi|299857042|gb|ADWS01000022.1| GENE 9 7232 - 7408 253 58 aa, chain - ## HITS:1 COG:no KEGG:B21_01150 NR:ns ## KEGG: B21_01150 # Name: ymgC # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 58 25 82 82 96 100.0 3e-19 MTHGYVDSHIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVLS >gi|299857042|gb|ADWS01000022.1| GENE 10 7593 - 7859 243 88 aa, chain - ## HITS:1 COG:no KEGG:B21_01149 NR:ns ## KEGG: B21_01149 # Name: ymgB # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 88 1 88 88 135 100.0 4e-31 MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS LETTSDILKADVIRKTLEIVLRYTADDM >gi|299857042|gb|ADWS01000022.1| GENE 11 8203 - 8439 231 78 aa, chain - ## HITS:1 COG:no KEGG:ECO103_1265 NR:ns ## KEGG: ECO103_1265 # Name: ycgZ # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 78 1 78 78 145 100.0 5e-34 MHQNSVTLDSAGAITRYFAKANLPTQQETLGEIVTEILKDGRNLSRKSLCAKLLCRLEHA TGEEEQKHYNALIGLLFE >gi|299857042|gb|ADWS01000022.1| GENE 12 8753 - 9964 583 403 aa, chain + ## HITS:1 COG:ycgF_2 KEGG:ns NR:ns ## COG: ycgF_2 COG2200 # Protein_GI_number: 16129126 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 161 403 1 243 243 476 98.0 1e-134 MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCTLSPTINDHFAFHPIV DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFAMAHALELGDKMIS INLLPMTLVNEPDAVSFLLDEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK >gi|299857042|gb|ADWS01000022.1| GENE 13 10169 - 10900 365 243 aa, chain + ## HITS:1 COG:ycgE KEGG:ns NR:ns ## COG: ycgE COG0789 # Protein_GI_number: 16129125 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 243 1 243 243 475 100.0 1e-134 MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNG VPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHV YLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARLWL EAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIF HAP >gi|299857042|gb|ADWS01000022.1| GENE 14 11121 - 11525 180 134 aa, chain + ## HITS:1 COG:ycgX KEGG:ns NR:ns ## COG: ycgX COG5562 # Protein_GI_number: 16129124 # Func_class: R General function prediction only # Function: Phage envelope protein # Organism: Escherichia coli K12 # 1 134 1 134 134 265 100.0 1e-71 MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT LLYIEDVENNKPLI >gi|299857042|gb|ADWS01000022.1| GENE 15 12647 - 13897 1554 416 aa, chain - ## HITS:1 COG:ECs1608 KEGG:ns NR:ns ## COG: ECs1608 COG0538 # Protein_GI_number: 15830862 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 416 1 416 416 842 99.0 0 MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYKGE RKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQ ELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLR EEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGA FKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIA CMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSA EMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGDAIIKNM >gi|299857042|gb|ADWS01000022.1| GENE 16 14099 - 14722 468 207 aa, chain + ## HITS:1 COG:ymfC KEGG:ns NR:ns ## COG: ymfC COG1187 # Protein_GI_number: 16129098 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli K12 # 1 207 1 207 207 400 100.0 1e-112 MQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQ GVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVT LNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFP TLRLIRYAMGDYSLDNLANGEWREVTD >gi|299857042|gb|ADWS01000022.1| GENE 17 14732 - 15193 446 153 aa, chain + ## HITS:1 COG:ECs1606 KEGG:ns NR:ns ## COG: ECs1606 COG0494 # Protein_GI_number: 15830860 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 314 100.0 3e-86 MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISA QPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRS PLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI >gi|299857042|gb|ADWS01000022.1| GENE 18 15247 - 16353 1308 368 aa, chain + ## HITS:1 COG:trmU KEGG:ns NR:ns ## COG: trmU COG0482 # Protein_GI_number: 16129096 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Escherichia coli K12 # 1 368 16 383 383 748 100.0 0 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII EQRLPLPV >gi|299857042|gb|ADWS01000022.1| GENE 19 16389 - 17030 735 213 aa, chain + ## HITS:1 COG:ycfC KEGG:ns NR:ns ## COG: ycfC COG2915 # Protein_GI_number: 16129095 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in purine metabolism # Organism: Escherichia coli K12 # 1 213 1 213 213 380 100.0 1e-105 MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSIIDMNPSSTLAVFGGSEA NLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSAKGALDTLGNRINGLQRQL EHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRATLLAGIRAAVL WHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL >gi|299857042|gb|ADWS01000022.1| GENE 20 17034 - 18404 1659 456 aa, chain + ## HITS:1 COG:ECs1603 KEGG:ns NR:ns ## COG: ECs1603 COG0015 # Protein_GI_number: 15830857 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 931 100.0 0 MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFA ADAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKEKVAEIPELHAVSEFIHFA CTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQYRDIPLLSRTHGQPATPSTI GKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQ WNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPH KVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQST LKGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAEGMK QFIDGLALPEEEKARLKAMTPANYIGRAITMVDELK >gi|299857042|gb|ADWS01000022.1| GENE 21 18572 - 19243 838 223 aa, chain + ## HITS:1 COG:ECs1602 KEGG:ns NR:ns ## COG: ECs1602 COG0745 # Protein_GI_number: 15830856 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 223 1 223 223 416 99.0 1e-116 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGL SLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNS GLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYP DAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGYLFELR >gi|299857042|gb|ADWS01000022.1| GENE 22 19243 - 20703 1206 486 aa, chain + ## HITS:1 COG:phoQ KEGG:ns NR:ns ## COG: phoQ COG0642 # Protein_GI_number: 16129092 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 486 1 486 486 956 100.0 0 MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFY TLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFH EIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVVVDT IPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLN PATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSV SDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGV NISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGI PLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQH SAPKDE >gi|299857042|gb|ADWS01000022.1| GENE 23 20779 - 21900 1307 373 aa, chain + ## HITS:1 COG:ycfD KEGG:ns NR:ns ## COG: ycfD COG2850 # Protein_GI_number: 16129091 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 373 4 376 376 749 100.0 0 MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGK WQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGG GVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILY IPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPA DVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQG EVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAML AALVNSGYWFFEG >gi|299857042|gb|ADWS01000022.1| GENE 24 22046 - 23275 1533 409 aa, chain - ## HITS:1 COG:ECs1572 KEGG:ns NR:ns ## COG: ECs1572 COG2195 # Protein_GI_number: 15830826 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 1 408 1 408 408 833 99.0 0 MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEMGLINVTLSEKGTLMA TLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVL HQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNIPHGDIRVAFTPDEEVGKGAK HFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIVGNNVHPGTAKGVMVNALSLAAR IHAEVPADESPEMTEGYEGFYHLASMKGTVDRADMHYIIRDFDRKQFEARKRKMMEIAKK VGKGLHPDCYIELVIEDSYYNMREKVVEHPHIIDIAQQAMRDCDIEPELKPIRGGTDGAQ LSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELTAQRKS >gi|299857042|gb|ADWS01000022.1| GENE 25 23543 - 24661 1182 372 aa, chain + ## HITS:1 COG:ECs1571 KEGG:ns NR:ns ## COG: ECs1571 COG3842 # Protein_GI_number: 15830825 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 372 7 378 378 733 99.0 0 MNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGL ETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP RVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQM QNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAG FIGEINMFNATVIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEIND DNHAEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVE SWEVVLADEEHK >gi|299857042|gb|ADWS01000022.1| GENE 26 24675 - 25502 980 275 aa, chain + ## HITS:1 COG:ECs1570 KEGG:ns NR:ns ## COG: ECs1570 COG1176 # Protein_GI_number: 15830824 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli O157:H7 # 1 271 11 281 287 444 99.0 1e-124 MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLLDPLYFEVLLHSLN MALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYL NEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGAS KLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDW PFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE >gi|299857042|gb|ADWS01000022.1| GENE 27 25499 - 26293 847 264 aa, chain + ## HITS:1 COG:ECs1500 KEGG:ns NR:ns ## COG: ECs1500 COG1177 # Protein_GI_number: 15830754 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 431 100.0 1e-121 MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAA QHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFM LLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPL AMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVL SLVMVIASQLIARDKTKGNTGDVK >gi|299857042|gb|ADWS01000022.1| GENE 28 26290 - 27336 1425 348 aa, chain + ## HITS:1 COG:potD KEGG:ns NR:ns ## COG: potD COG0687 # Protein_GI_number: 16129086 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 348 1 348 348 651 99.0 0 MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYE SNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKLSNFSNLDPDMLNKPFD PNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKL GYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGSAFVARQAG TPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAA RKLLSPEVANDKTLYPDAETIKNGEWQNDVGAASSIYEEYYQKLKAGR >gi|299857042|gb|ADWS01000022.1| GENE 29 27394 - 27855 154 153 aa, chain + ## HITS:1 COG:no KEGG:ECO111_1399 NR:ns ## KEGG: ECO111_1399 # Name: yfmA # Def: putative inner membrane protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 153 1 153 153 303 99.0 2e-81 MSQDSKVLSRAFLGIGLILLVISAIIFYYHFTFTKSAVHTEGIIVDAVWYNNHSNDVDDN GSWYPVVAFRPTPDYTLIFNSNIGSDFYEDSEGDRVNVYYPPGHPEQAEINNPWVNFFKW GFVGIAGIIFGSVGLIITLPSTKKSRRKRKSRP >gi|299857042|gb|ADWS01000022.1| GENE 30 27930 - 28640 415 236 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1166 NR:ns ## KEGG: ECO103_1166 # Name: ycfZ # Def: putative inner membrane protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 236 27 262 262 469 100.0 1e-131 MKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVILPDINNEASLRQNGKAMLAHASS SLSNVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINN ALAVLQAQILKQPTPPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSWIFCYTTRF IYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR >gi|299857042|gb|ADWS01000022.1| GENE 31 28779 - 29600 675 273 aa, chain - ## HITS:1 COG:ycfY KEGG:ns NR:ns ## COG: ycfY COG0846 # Protein_GI_number: 16129083 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Escherichia coli K12 # 1 273 1 273 279 543 100.0 1e-154 MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVLVLTGAGISAESGIRTF RAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQPEIQPNAAHLALAKLQDAL GDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQVLDWTGDVTPEDKCHCCQFP APLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELN LEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGL >gi|299857042|gb|ADWS01000022.1| GENE 32 29616 - 30527 833 303 aa, chain - ## HITS:1 COG:ycfX KEGG:ns NR:ns ## COG: ycfX COG1940 # Protein_GI_number: 16129082 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli K12 # 1 303 1 303 303 625 100.0 1e-179 MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEADQRFGCKGSV GIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFT QYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRLPVDALTMMGLDFPLRRCGCG QHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVCLGNI LTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPVARVPRIERARHGDAGGMRGAAFLH LTD >gi|299857042|gb|ADWS01000022.1| GENE 33 30556 - 31794 1286 412 aa, chain - ## HITS:1 COG:lolE KEGG:ns NR:ns ## COG: lolE COG4591 # Protein_GI_number: 16129081 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Escherichia coli K12 # 1 412 3 414 414 759 100.0 0 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ EQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQP KRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAG EVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDI AVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLS SDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ >gi|299857042|gb|ADWS01000022.1| GENE 34 31800 - 32501 226 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 6 216 9 210 309 91 29 1e-17 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE >gi|299857042|gb|ADWS01000022.1| GENE 35 32494 - 33693 1278 399 aa, chain - ## HITS:1 COG:ECs1494 KEGG:ns NR:ns ## COG: ECs1494 COG4591 # Protein_GI_number: 15830748 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Escherichia coli O157:H7 # 1 399 1 399 399 698 99.0 0 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRMMVPSASQFTPMGRIPS QRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE >gi|299857042|gb|ADWS01000022.1| GENE 36 33955 - 35028 1012 357 aa, chain + ## HITS:1 COG:ycfT KEGG:ns NR:ns ## COG: ycfT COG4763 # Protein_GI_number: 16129078 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 357 1 357 357 630 100.0 0 MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLSKCWIYFNLYLAPFRMP VFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSN ASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIFSRLALPLFALFVLLSVAVNF VPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTIS LLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMN AARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR >gi|299857042|gb|ADWS01000022.1| GENE 37 35156 - 38602 3774 1148 aa, chain + ## HITS:1 COG:mfd KEGG:ns NR:ns ## COG: mfd COG1197 # Protein_GI_number: 16129077 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Escherichia coli K12 # 1 1148 1 1148 1148 2276 99.0 0 MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEIS QFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPH SFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPY RLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRD PEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTL ARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPD LAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASD RGRYLMIGAAEHGFVDKVRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIG QPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENA PLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFE TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTL LAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKF KDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPP ARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAI GHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLG EEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDV NTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARILLDVARLRQQAQKLGIRKLEG NEKGGVIEFAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMR ELEENAIA >gi|299857042|gb|ADWS01000022.1| GENE 38 38749 - 39708 821 319 aa, chain + ## HITS:1 COG:ECs1491 KEGG:ns NR:ns ## COG: ECs1491 COG1376 # Protein_GI_number: 15830745 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 319 2 320 320 598 100.0 1e-171 MIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAK KYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKN SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNII NTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMD VRSGMPVDVRRHQVSPQTL >gi|299857042|gb|ADWS01000022.1| GENE 39 39791 - 40048 265 85 aa, chain - ## HITS:1 COG:no KEGG:ECO103_1157 NR:ns ## KEGG: ECO103_1157 # Name: ycfR # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 85 1 85 85 127 100.0 9e-29 MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADE MGAKSFRITSVTGPNTLHGTAVIYK >gi|299857042|gb|ADWS01000022.1| GENE 40 40211 - 40921 467 236 aa, chain + ## HITS:1 COG:ECs1489 KEGG:ns NR:ns ## COG: ECs1489 COG1309 # Protein_GI_number: 15830743 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 483 99.0 1e-137 MGSGLVNGGDYFYNNLSFTVTRYNGIMATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQ HGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVE SALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQ RQARGEIPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK >gi|299857042|gb|ADWS01000022.1| GENE 41 40983 - 41522 572 179 aa, chain - ## HITS:1 COG:ycfJ KEGG:ns NR:ns ## COG: ycfJ COG3134 # Protein_GI_number: 16129073 # Func_class: S Function unknown # Function: Predicted outer membrane lipoprotein # Organism: Escherichia coli K12 # 1 179 1 179 179 300 100.0 1e-81 MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVT HRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESD TYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPLDSNGQLILNNKV >gi|299857042|gb|ADWS01000022.1| GENE 42 41749 - 43053 1267 434 aa, chain - ## HITS:1 COG:ndh KEGG:ns NR:ns ## COG: ndh COG1252 # Protein_GI_number: 16129072 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Escherichia coli K12 # 1 434 1 434 434 863 100.0 0 MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLD EGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDTLVM ALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGA TGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLG VRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEP TLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKNYQYK DHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLV GSINRVIRPRLKLH >gi|299857042|gb|ADWS01000022.1| GENE 43 43453 - 43995 612 180 aa, chain - ## HITS:1 COG:ECs1486 KEGG:ns NR:ns ## COG: ECs1486 COG3150 # Protein_GI_number: 15830740 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 180 20 199 199 375 100.0 1e-104 MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDE RPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKIDRPEEYADIATKCVTNFR EKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG >gi|299857042|gb|ADWS01000022.1| GENE 44 44018 - 45043 1074 341 aa, chain - ## HITS:1 COG:ycfO KEGG:ns NR:ns ## COG: ycfO COG1472 # Protein_GI_number: 16129070 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli K12 # 1 341 1 341 341 672 99.0 0 MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNHLVVA VDQEGGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGWLMASEMIAMDIDISFAPV LDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETP CDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSDVDPRPASGSPYWLKTVLRQELG FDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAEGV TRLYHKGSFSRQELMDSARWKAISTRLNQLHERWQEEKAGH >gi|299857042|gb|ADWS01000022.1| GENE 45 45054 - 45851 275 265 aa, chain - ## HITS:1 COG:ECs1484 KEGG:ns NR:ns ## COG: ECs1484 COG0510 # Protein_GI_number: 15830738 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Escherichia coli O157:H7 # 2 265 11 274 274 497 98.0 1e-140 MRDELLSRFFPQFHPVTTFHSGLSGGSFLIEHQGQRFVVRQPHDPDAPRFAFLRQYRALS QLPACIAPKPHLYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLL ELYWQQSDPARRTVGWLRRLKRLRKAREPRPLRLSPLHMDVHAGNLVHSASGLKLIDWEY AGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLLMLKAGWFEY RWRQTGDQQFIRLADDTWRQLLIKQ >gi|299857042|gb|ADWS01000022.1| GENE 46 45859 - 46500 606 213 aa, chain - ## HITS:1 COG:ECs1483 KEGG:ns NR:ns ## COG: ECs1483 COG3417 # Protein_GI_number: 15830737 # Func_class: R General function prediction only # Function: Collagen-binding surface adhesin SpaP (antigen I/II family) # Organism: Escherichia coli O157:H7 # 1 213 1 213 213 364 99.0 1e-101 MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPS PIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSVLLVDSVNNRTNGSLNAAE ATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGAHYVLYSS ASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ >gi|299857042|gb|ADWS01000022.1| GENE 47 46514 - 46891 160 125 aa, chain - ## HITS:1 COG:ECs1482 KEGG:ns NR:ns ## COG: ECs1482 COG5633 # Protein_GI_number: 15830736 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 125 1 125 125 226 100.0 1e-59 MRKGCFGLVSLALLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSA SSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVR LYLYL >gi|299857042|gb|ADWS01000022.1| GENE 48 46894 - 47253 479 119 aa, chain - ## HITS:1 COG:ECs1481 KEGG:ns NR:ns ## COG: ECs1481 COG0537 # Protein_GI_number: 15830735 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 205 100.0 2e-53 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQ ALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL >gi|299857042|gb|ADWS01000022.1| GENE 49 47587 - 49776 2072 729 aa, chain + ## HITS:1 COG:ECs1480 KEGG:ns NR:ns ## COG: ECs1480 COG4773 # Protein_GI_number: 15830734 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Escherichia coli O157:H7 # 1 729 1 729 729 1407 99.0 0 MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDY SVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTQGISKSQADSDRALY YSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAINM VRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS EKTFFSGIVDADLGDLTMLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDW AYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNY GPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIF PDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELG LKSDWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAI TDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYT DTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGAPRN FSITGTYQF >gi|299857042|gb|ADWS01000022.1| GENE 50 49836 - 51269 1590 477 aa, chain - ## HITS:1 COG:ptsG_1 KEGG:ns NR:ns ## COG: ptsG_1 COG1263 # Protein_GI_number: 16129064 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 397 1 397 397 739 100.0 0 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMP LIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVLG GIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQ TFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRY MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPI EFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIV GIGYAIVYYTIFRVLIKALDLKTPGREDATEDAKATGTSEMAPALVAAFGGKENITNLDA CITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNH >gi|299857042|gb|ADWS01000022.1| GENE 51 51564 - 52361 777 265 aa, chain - ## HITS:1 COG:ECs1478 KEGG:ns NR:ns ## COG: ECs1478 COG0084 # Protein_GI_number: 15830732 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli O157:H7 # 1 265 1 265 265 528 100.0 1e-150 MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNV VFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIG RELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIV TFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVE ELAQVTTDNFARLFHIDASRLQSIR >gi|299857042|gb|ADWS01000022.1| GENE 52 52372 - 53376 730 334 aa, chain - ## HITS:1 COG:ECs1477 KEGG:ns NR:ns ## COG: ECs1477 COG0470 # Protein_GI_number: 15830731 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 607 99.0 1e-173 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG HCRGCQLMQAGTHPDYYTLAPEKGKNMLGIDAVREVTEKLNEHARLGGAKVVWVTDAALL TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ APARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL MSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL >gi|299857042|gb|ADWS01000022.1| GENE 53 53373 - 54014 766 213 aa, chain - ## HITS:1 COG:tmk KEGG:ns NR:ns ## COG: tmk COG0125 # Protein_GI_number: 16129061 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Escherichia coli K12 # 1 213 1 213 213 399 100.0 1e-111 MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSV GDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHML ATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAAQ DKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA >gi|299857042|gb|ADWS01000022.1| GENE 54 54004 - 55026 1063 340 aa, chain - ## HITS:1 COG:yceG KEGG:ns NR:ns ## COG: yceG COG1559 # Protein_GI_number: 16129060 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Escherichia coli K12 # 1 340 1 340 340 652 99.0 0 MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYAD KIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRL SDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWMYTANTTDVALLKR AHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAK TPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKNAQ >gi|299857042|gb|ADWS01000022.1| GENE 55 55029 - 55838 497 269 aa, chain - ## HITS:1 COG:ECs1474 KEGG:ns NR:ns ## COG: ECs1474 COG0115 # Protein_GI_number: 15830728 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 542 98.0 1e-154 MFLINGYKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFW PQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEG MTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNADEALVLDSEGWVTECCAANLF WRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEEALQADEMVICNALMP VMPVRACGDVSFSSATLYEYLAPLCERPN >gi|299857042|gb|ADWS01000022.1| GENE 56 55958 - 57199 1221 413 aa, chain - ## HITS:1 COG:ECs1473 KEGG:ns NR:ns ## COG: ECs1473 COG0304 # Protein_GI_number: 15830727 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 1 413 1 413 413 729 100.0 0 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHT SLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAY GDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLV LEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGY VNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRD QAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI >gi|299857042|gb|ADWS01000022.1| GENE 57 57287 - 57523 407 78 aa, chain - ## HITS:1 COG:ECs1472 KEGG:ns NR:ns ## COG: ECs1472 COG0236 # Protein_GI_number: 15830726 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Escherichia coli O157:H7 # 1 78 1 78 78 108 100.0 2e-24 MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEA EKITTVQAAIDYINGHQA >gi|299857042|gb|ADWS01000022.1| GENE 58 57734 - 58468 252 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 243 4 242 242 101 29 1e-20 MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNV TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKA VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA PGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG MYMV >gi|299857042|gb|ADWS01000022.1| GENE 59 58481 - 59410 1000 309 aa, chain - ## HITS:1 COG:fabD KEGG:ns NR:ns ## COG: fabD COG0331 # Protein_GI_number: 16129055 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Escherichia coli K12 # 1 309 1 309 309 532 100.0 1e-151 MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTW QTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKF MQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAG AACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNG DAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEP SAMAAALEL >gi|299857042|gb|ADWS01000022.1| GENE 60 59426 - 60379 898 317 aa, chain - ## HITS:1 COG:ECs1469 KEGG:ns NR:ns ## COG: ECs1469 COG0332 # Protein_GI_number: 15830723 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 612 100.0 1e-175 MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAAT RAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALS VADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPGIISTHLH ADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDW LVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVL LEAFGGGFTWGSALVRF >gi|299857042|gb|ADWS01000022.1| GENE 61 60447 - 61487 577 346 aa, chain - ## HITS:1 COG:ZplsX KEGG:ns NR:ns ## COG: ZplsX COG0416 # Protein_GI_number: 15801207 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Escherichia coli O157:H7 EDL933 # 1 346 1 346 346 631 99.0 0 MGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDAITPLLAKADFEQRSRLQIIPAQSVIA SDARPSQAIRASRGSSMRMALELVKEGRAQACVSAGNTGALMGLAKLLLKPLEGIERPAL VTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVEIPNPRVALLNIGEEEV KGLDSIRDASAVLKTIPSINYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFL SLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQ RAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGFELLDGGKSGTLR >gi|299857042|gb|ADWS01000022.1| GENE 62 61598 - 61771 292 57 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15801206|ref|NP_287223.1| 50S ribosomal protein L32 [Escherichia coli O157:H7 EDL933] # 1 57 1 57 57 117 100 2e-25 MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK >gi|299857042|gb|ADWS01000022.1| GENE 63 61823 - 62344 466 173 aa, chain - ## HITS:1 COG:ECs1466 KEGG:ns NR:ns ## COG: ECs1466 COG1399 # Protein_GI_number: 15830720 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 318 99.0 2e-87 MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAV LNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL AMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEVQKPNPFAVLASLKRK >gi|299857042|gb|ADWS01000022.1| GENE 64 62504 - 63127 442 207 aa, chain + ## HITS:1 COG:yceF KEGG:ns NR:ns ## COG: yceF COG0424 # Protein_GI_number: 16129050 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli K12 # 1 207 1 207 207 418 100.0 1e-117 MAIINTLYLMEKNMPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLR LAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLA LFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGR DPNTLVGLPLIALCQMLRREGKNPLMG >gi|299857042|gb|ADWS01000022.1| GENE 65 63239 - 64198 187 319 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 95 309 83 284 285 76 29 3e-13 MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPAYKL EAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLS FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALV RGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGR THQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRI EAPMDDGLKRCLQKLRNAH >gi|299857042|gb|ADWS01000022.1| GENE 66 64771 - 67956 3070 1061 aa, chain + ## HITS:1 COG:rne KEGG:ns NR:ns ## COG: rne COG1530 # Protein_GI_number: 16129047 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Escherichia coli K12 # 1 1061 1 1061 1061 1483 99.0 0 MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY GAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEAL QWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS LSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQME TPHYHVLRVRKGEETPTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPDVPPA PTPAEPAAPVVAPAPKAAPATPATPAQPGLLSRFFGALKALFSGSEETKPTEQPAPKAEA KPERQQDRRKPRQNNRRDRNERRDTRSERTEGSDNREENRRNRRQAQQQTAETRESRQQA EVTEKARTTDEQQAPRRERSRRRNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRR KQRQLNQKVRYEQSVAEEAVVAPVVEETAAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQ QEENNADNRDNGGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASG KVWIRYPIVRPQDVQVEEQREQEEVHVQPMVTEVPVAAAIEPVVSAPVVEEVAGVVEAPV QVAEPQPEVVETTHPEVIAAAVTEQPQVITESDVAVAQEVAEQAEPVVEPQEETADIEEV VETAEVVVAEPEVVAQPAAPVVAEVAAEVETVAAVEPEVTVEHNHATAPMTRAPAPEYVP EAPRHSDWQRPTFAFEGKGAAGGHTATHHASAAPARPQPVE >gi|299857042|gb|ADWS01000022.1| GENE 67 68152 - 68346 222 64 aa, chain - ## HITS:1 COG:ECs1461 KEGG:ns NR:ns ## COG: ECs1461 COG1344 # Protein_GI_number: 15830715 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Escherichia coli O157:H7 # 1 64 254 317 317 106 98.0 1e-23 VNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLF QLNK Prediction of potential genes in microbial genomes Time: Sun May 15 22:28:05 2011 Seq name: gi|299857041|gb|ADWS01000023.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont22.1, whole genome shotgun sequence Length of sequence - 67673 bp Number of predicted genes - 70, with homology - 69 Number of transcription units - 45, operones - 14 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 294 268 ## APECO1_O1CoBM79 hypothetical protein 2 1 Op 2 . + CDS 279 - 1301 114 ## APECO1_O1CoBM78 hypothetical protein - Term 1444 - 1479 -0.3 3 2 Tu 1 . - CDS 1555 - 1821 179 ## COG1662 Transposase and inactivated derivatives, IS1 family - Prom 1967 - 2026 2.0 4 3 Tu 1 . + CDS 2004 - 2219 77 ## SbBS512_E3230 putative IS1 encoded protein + Term 2437 - 2470 1.3 5 4 Op 1 . - CDS 2281 - 2538 243 ## ECO103_4296 outer membrane porin L 6 4 Op 2 3/0.571 - CDS 2606 - 4009 1127 ## COG2211 Na+/melibiose symporter and related transporters 7 4 Op 3 3/0.571 - CDS 4052 - 5437 1488 ## COG2211 Na+/melibiose symporter and related transporters 8 4 Op 4 . - CDS 5483 - 7519 2096 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases - Prom 7604 - 7663 6.5 - Term 7574 - 7621 -0.7 9 5 Tu 1 2/0.714 - CDS 7718 - 8620 422 ## COG2017 Galactose mutarotase and related enzymes - Term 8627 - 8668 7.4 10 6 Op 1 3/0.571 - CDS 8758 - 9999 1292 ## COG2942 N-acyl-D-glucosamine 2-epimerase 11 6 Op 2 4/0.286 - CDS 10016 - 10894 966 ## COG3684 Tagatose-1,6-bisphosphate aldolase 12 6 Op 3 . - CDS 10918 - 11814 906 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases + Prom 11898 - 11957 4.1 13 7 Op 1 3/0.571 + CDS 11982 - 12878 592 ## COG0524 Sugar kinases, ribokinase family 14 7 Op 2 1/0.786 + CDS 12912 - 13697 499 ## COG1349 Transcriptional regulators of sugar metabolism + Prom 13713 - 13772 2.1 15 8 Op 1 2/0.714 + CDS 13796 - 14395 728 ## COG1011 Predicted hydrolase (HAD superfamily) 16 8 Op 2 7/0.143 + CDS 14389 - 15261 720 ## COG1295 Predicted membrane protein 17 8 Op 3 5/0.214 + CDS 15258 - 15695 432 ## COG1490 D-Tyr-tRNAtyr deacylase 18 8 Op 4 . + CDS 15740 - 16681 1105 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 19 9 Tu 1 . - CDS 16745 - 17653 324 ## COG0657 Esterase/lipase 20 10 Tu 1 . + CDS 18194 - 18484 270 ## COG2944 Predicted transcriptional regulator + Term 18525 - 18574 1.2 + Prom 18834 - 18893 7.0 21 11 Tu 1 . + CDS 19088 - 19306 70 ## SFV_3606 hypothetical protein + Prom 19338 - 19397 4.8 22 12 Tu 1 . + CDS 19525 - 19767 125 ## SSON_4059 hypothetical protein 23 13 Op 1 9/0.000 - CDS 20097 - 21026 1016 ## COG3058 Uncharacterized protein involved in formate dehydrogenase formation 24 13 Op 2 12/0.000 - CDS 21023 - 21658 574 ## COG2864 Cytochrome b subunit of formate dehydrogenase 25 13 Op 3 16/0.000 - CDS 21655 - 22557 975 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 26 13 Op 4 5/0.214 - CDS 22570 - 24984 2759 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 27 13 Op 5 . - CDS 25033 - 25620 507 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 25837 - 25896 4.7 + Prom 25610 - 25669 4.4 28 14 Tu 1 . + CDS 25814 - 26647 603 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity + Term 26654 - 26700 8.4 + Prom 26658 - 26717 9.8 29 15 Tu 1 . + CDS 26800 - 27840 912 ## EcE24377A_4426 putative lipoprotein - Term 27848 - 27886 9.3 30 16 Op 1 3/0.571 - CDS 27890 - 29638 1065 ## COG3711 Transcriptional antiterminator 31 16 Op 2 2/0.714 - CDS 29638 - 30708 1082 ## COG1363 Cellulase M and related proteins 32 16 Op 3 7/0.143 - CDS 30698 - 32149 1501 ## COG1299 Phosphotransferase system, fructose-specific IIC component 33 16 Op 4 1/0.786 - CDS 32160 - 32606 337 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 32797 - 32856 5.1 - Term 32863 - 32898 7.4 34 17 Op 1 4/0.286 - CDS 32907 - 33221 330 ## COG3254 Uncharacterized conserved protein 35 17 Op 2 5/0.214 - CDS 33231 - 34055 969 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 34153 - 34212 5.3 36 18 Op 1 6/0.143 - CDS 34230 - 35489 1350 ## COG4806 L-rhamnose isomerase 37 18 Op 2 . - CDS 35486 - 36955 1235 ## COG1070 Sugar (pentulose and hexulose) kinases - Prom 37013 - 37072 2.4 38 19 Tu 1 . + CDS 37243 - 38079 488 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 37914 - 37969 1.8 39 20 Tu 1 . - CDS 38027 - 38161 102 ## - Prom 38399 - 38458 2.9 40 21 Tu 1 . + CDS 38153 - 39001 553 ## COG2207 AraC-type DNA-binding domain-containing proteins 41 22 Tu 1 . - CDS 38998 - 40032 1351 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 40204 - 40263 6.4 + Prom 40207 - 40266 7.2 42 23 Tu 1 . + CDS 40317 - 40937 573 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 40992 - 41028 6.4 + Prom 41007 - 41066 7.3 43 24 Tu 1 . + CDS 41191 - 42180 965 ## ECSE_4198 2-keto-3-deoxygluconate permease + Term 42199 - 42243 8.0 + Prom 42234 - 42293 3.7 44 25 Tu 1 . + CDS 42329 - 43003 570 ## COG2258 Uncharacterized protein conserved in bacteria + Term 43032 - 43095 0.8 - Term 42965 - 43000 -0.7 45 26 Op 1 40/0.000 - CDS 43109 - 44482 1419 ## COG0642 Signal transduction histidine kinase 46 26 Op 2 . - CDS 44479 - 45177 816 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 45234 - 45293 2.1 + Prom 45241 - 45300 2.0 47 27 Tu 1 . + CDS 45327 - 45827 248 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein + Term 45868 - 45898 4.3 + Prom 45896 - 45955 4.3 48 28 Tu 1 . + CDS 45975 - 46877 536 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 46925 - 46972 1.3 + Prom 46919 - 46978 4.2 49 29 Tu 1 . + CDS 47058 - 48020 1241 ## COG0205 6-phosphofructokinase + Term 48206 - 48234 0.6 + Prom 48222 - 48281 6.6 50 30 Tu 1 . + CDS 48339 - 49328 1272 ## COG1613 ABC-type sulfate transport system, periplasmic component + Term 49338 - 49400 1.8 + Prom 49352 - 49411 4.8 51 31 Tu 1 . + CDS 49435 - 50190 558 ## COG2134 CDP-diacylglycerol pyrophosphatase - Term 50201 - 50235 5.2 52 32 Tu 1 . - CDS 50245 - 51012 885 ## COG0149 Triosephosphate isomerase - Term 51038 - 51068 2.1 53 33 Tu 1 . - CDS 51120 - 51719 611 ## B21_03754 hypothetical protein - Prom 51743 - 51802 5.8 + Prom 51737 - 51796 2.5 54 34 Tu 1 3/0.571 + CDS 51820 - 52260 431 ## COG3152 Predicted membrane protein + Prom 52377 - 52436 3.3 55 35 Op 1 3/0.571 + CDS 52472 - 52771 349 ## COG3691 Uncharacterized protein conserved in bacteria 56 35 Op 2 . + CDS 52798 - 53226 387 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 53257 - 53309 4.6 57 36 Tu 1 4/0.286 - CDS 53231 - 53977 880 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Term 54018 - 54053 5.1 58 37 Op 1 4/0.286 - CDS 54074 - 55213 1350 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 59 37 Op 2 18/0.000 - CDS 55219 - 56727 1886 ## COG0554 Glycerol kinase 60 37 Op 3 . - CDS 56750 - 57595 780 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) - Prom 57701 - 57760 5.3 61 38 Tu 1 . + CDS 58026 - 58265 501 ## COG3074 Uncharacterized protein conserved in bacteria + Term 58327 - 58355 1.0 - Term 58311 - 58347 2.3 62 39 Tu 1 7/0.143 - CDS 58350 - 58835 555 ## COG0684 Demethylmenaquinone methyltransferase - Prom 58861 - 58920 6.7 63 40 Tu 1 6/0.143 - CDS 58928 - 59854 1078 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase - Term 59859 - 59892 2.9 64 41 Op 1 24/0.000 - CDS 59921 - 61252 1202 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 65 41 Op 2 7/0.143 - CDS 61262 - 61792 596 ## COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit - Prom 61812 - 61871 1.7 - Term 61816 - 61847 4.1 66 42 Op 1 6/0.143 - CDS 61885 - 62739 756 ## COG3087 Cell division protein - Prom 62874 - 62933 2.3 67 42 Op 2 . - CDS 62936 - 63961 909 ## COG1609 Transcriptional regulators - Prom 64050 - 64109 5.2 68 43 Tu 1 . - CDS 64117 - 66315 2013 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase - Prom 66340 - 66399 2.8 + Prom 66398 - 66457 5.2 69 44 Tu 1 . + CDS 66518 - 66730 384 ## PROTEIN SUPPORTED gi|15804527|ref|NP_290567.1| 50S ribosomal protein L31 + Term 66734 - 66797 5.0 + Prom 66804 - 66863 3.2 70 45 Tu 1 . + CDS 66890 - 67673 575 ## COG3209 Rhs family protein Predicted protein(s) >gi|299857041|gb|ADWS01000023.1| GENE 1 1 - 294 268 97 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM79 NR:ns ## KEGG: APECO1_O1CoBM79 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 97 425 521 521 199 100.0 2e-50 NDGNYQQNCDERYADVLCSRSRVFADHDNSRSTFEICLYQDNADLCDALFRGTRRTLTVQ DYMLANKAEAAFQLLQLHAEKLTVPDYIQEALAWIRE >gi|299857041|gb|ADWS01000023.1| GENE 2 279 - 1301 114 340 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM78 NR:ns ## KEGG: APECO1_O1CoBM78 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 339 1 339 345 686 99.0 0 MDKRVIFAVAGSGKTTLLIRRLREDRRTLILTFTVNNEAHLRAQIIRRFGYIPYGIRVMT WFEFLHGFCFRPFLQEQLSSRGLSFNQPPSRIPRTNIRHYQDPAGRLYHRRLAHLLTARG LLPDIRTRLARYYDELFVDEVQDFAGHDFNFLLELCRAEISVLCCGDFYQHTFDTSRDGN VNATLHEDITRYEARFRAAGIMVDCETLSRTWRCSATVCEFITGQLNIRISAHGTHTTQI EIVTDEARSAALHADNTMIKLFYREHHRYGCHSMNWGGSKGLDHFQDVCIVMGANHWMRL IQQKLAALPPSSRNRLYVACSRARGNIYFIPESHLRRFRN >gi|299857041|gb|ADWS01000023.1| GENE 3 1555 - 1821 179 88 aa, chain - ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|299857041|gb|ADWS01000023.1| GENE 4 2004 - 2219 77 71 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E3230 NR:ns ## KEGG: SbBS512_E3230 # Name: not_defined # Def: putative IS1 encoded protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 35 71 1 37 37 64 94.0 1e-09 MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGG AFAVTHHPVSS >gi|299857041|gb|ADWS01000023.1| GENE 5 2281 - 2538 243 85 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4296 NR:ns ## KEGG: ECO103_4296 # Name: ompL # Def: outer membrane porin L # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 77 1 77 230 154 100.0 8e-37 MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYT FQREDELKHGYNEIEGWGDAANLLI >gi|299857041|gb|ADWS01000023.1| GENE 6 2606 - 4009 1127 467 aa, chain - ## HITS:1 COG:yihO KEGG:ns NR:ns ## COG: yihO COG2211 # Protein_GI_number: 16131716 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli K12 # 1 463 3 465 487 889 99.0 0 MSDHNPLTLKLNLREKIAYGMGDVGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAK FFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIATLQFIATTFCLPVKTTIAT ALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQGGATIGLLICTVAFIPLQSLF SDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTAPTGHKASILKSFCAIFRNPPLLV LCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWMGFFSMGCILVGVLLVPVTVKCFGK KQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCVAFFGTAFVNSLNWALVPDTVDYGEWK TGIRAEGSVYTGYTFFRKISAALAGFLPGIMLTQIGYVPNIAQSDATLQGLRQLIFIWPC ALAIIAALTMGFFYTLNEKRFALIIEEINQRKNKEMATEEKTASVTL >gi|299857041|gb|ADWS01000023.1| GENE 7 4052 - 5437 1488 461 aa, chain - ## HITS:1 COG:yihP KEGG:ns NR:ns ## COG: yihP COG2211 # Protein_GI_number: 16131717 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli K12 # 1 461 8 468 468 874 98.0 0 MSHITTEDPATLRLPFKEKLSYGIGDLASNILLDIGTLYLLKFYTDVLGLPGTYGGIIFL ISKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFILYASFPVTLLAIANFVGTPFDVTGKTV MATILFMLYGLFFSMMNCSYGAMVPAITKNPNERASLAAWRQGGATLGLLLCTVGFVPVM NLIEGNQKLGYIFAATLFSLFGLLFMWICYSGVKERYVEIQPTNPAQKPGLLQSFRAIAG NRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSYMGFFSMGCIFIGVFLMPGA VRRFGKKKVYIGGLLIWVLGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTV EYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYVPNVAQADHTIEGLRQL IFIYPSALAVVTIVAMGCFYSLNEKMYVRIVEEIEARKRTA >gi|299857041|gb|ADWS01000023.1| GENE 8 5483 - 7519 2096 678 aa, chain - ## HITS:1 COG:yihQ KEGG:ns NR:ns ## COG: yihQ COG1501 # Protein_GI_number: 16131718 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Escherichia coli K12 # 1 678 1 678 678 1417 99.0 0 MDTPRPQLLDFQFHQNNDSFTLHFQQRLILTHSKDNPCLWIGSGIADIDMFRGNFSIKDK LQEKIALTDAIVSQSPDGWLIHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLR LAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWT FFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGK RVMWNWKWNSENYPQLDSRIKQWNQEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASG GDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCGGWMADFGEYLPTDTYLHNGI SAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGN RPGDNWQFDGDAETIAHFARMTSVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHT YTLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWTGEAFRGGEVTVNAPIGKPPV FYRADSEWAALFASLKSI >gi|299857041|gb|ADWS01000023.1| GENE 9 7718 - 8620 422 300 aa, chain - ## HITS:1 COG:yihR KEGG:ns NR:ns ## COG: yihR COG2017 # Protein_GI_number: 16131719 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli K12 # 1 300 9 308 308 595 97.0 1e-170 MQITNMHCSGQTVSLAAGDYHATIVTVGAGLAELTFQGCHLVIPHKPEEMPLAHLGKVLI PWPNRIANGCYRYQGQEYQLPINEHSSKAAIHGLLAWRDWQISELTATSVTLTAFLPPSY GYPFMLASQVVYSLNAHTGLSVEIASQNIGTVAAPYGVGIHTYLTCNLTSVDEYLFQLPA NQVYAVDEHVNPTTLHHVDELDLNFTQAKTIAATKIDHTFKTANDLWEITITHPQQALSV SLCCDQPWVQIYSGEKLQRQGLAVEPMSCPPNAFNSGIDLLLLEPGKPHRLFFNIYGQRK >gi|299857041|gb|ADWS01000023.1| GENE 10 8758 - 9999 1292 413 aa, chain - ## HITS:1 COG:yihS KEGG:ns NR:ns ## COG: yihS COG2942 # Protein_GI_number: 16131720 # Func_class: G Carbohydrate transport and metabolism # Function: N-acyl-D-glucosamine 2-epimerase # Organism: Escherichia coli K12 # 1 413 6 418 418 836 100.0 0 MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVY SVAAAMGRPGAYSLVDHGIKAMNGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGA ASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRGGNANMHAVEA FLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVY TVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSW WQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLDINAK >gi|299857041|gb|ADWS01000023.1| GENE 11 10016 - 10894 966 292 aa, chain - ## HITS:1 COG:yihT KEGG:ns NR:ns ## COG: yihT COG3684 # Protein_GI_number: 16131721 # Func_class: G Carbohydrate transport and metabolism # Function: Tagatose-1,6-bisphosphate aldolase # Organism: Escherichia coli K12 # 1 292 1 292 292 556 100.0 1e-158 MNKYTINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSVLTDFKVNAAKALSPYA SAILVDQQFCYRQVVEQNAIAKSCAMIVAADEFIPGNGIPVDSVVIDRKINPLQIKQDGG KALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDA AKELGDSGADLYKVEMPLYGKGPQQELLCASQRLNDHINMPWVILSSGVDEKLFPRAVRV AMTAGASGFLAGRAVWASVVGLPDNELMLRDVCAPKLQQLGDIVDEMMAKRR >gi|299857041|gb|ADWS01000023.1| GENE 12 10918 - 11814 906 298 aa, chain - ## HITS:1 COG:yihU KEGG:ns NR:ns ## COG: yihU COG2084 # Protein_GI_number: 16131722 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli K12 # 1 298 1 298 298 542 99.0 1e-154 MAAIAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEF IITMLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVP VGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINSGGPGMGIRVKLINNYMSIA LNALSAEAAVLCEALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHK DLGIALDVANQLHVPMPLGAASREVYSQARAAGRGRQDWSAILEQVRVSAGMTAKVKM >gi|299857041|gb|ADWS01000023.1| GENE 13 11982 - 12878 592 298 aa, chain + ## HITS:1 COG:yihV KEGG:ns NR:ns ## COG: yihV COG0524 # Protein_GI_number: 16131723 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 1 298 3 300 300 572 100.0 1e-163 MIRVACVGITVMDRIYYVEGLPTESGKYVARNYTEVGGGPAATAAVAAARLGAQVDFIGR VGDDDTGNSLLAELESWGVNTRYTKRYNQAKSSQSAIMVDTKGERIIINYPSPDLLPDAE WLEEIDFSQWDVVLADVRWHDGAKKAFTLARQAGVMTVLDGDITPQDISELVALSDHAAF SEPGLARLTGVKEMASALKQAQTLTNGHVYVTQGSAGCDWLENGGRQHQPAFKVDVVDTT GAGDVFHGALAVALATSGDLAESVRFASGVAALKCTRPGGRAGIPDCDQTRSFLSLFV >gi|299857041|gb|ADWS01000023.1| GENE 14 12912 - 13697 499 261 aa, chain + ## HITS:1 COG:ECs4807 KEGG:ns NR:ns ## COG: ECs4807 COG1349 # Protein_GI_number: 15834061 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 261 9 269 269 486 100.0 1e-137 MSLTELTGNPRHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGG AGRASSVVNTAFEQREVSQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNHNH LRIITNSLRVAHILYHNPRFEVMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAI ESDGALMEFDVNEANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDELPP AALKSRLQDSQIEIILPQEDA >gi|299857041|gb|ADWS01000023.1| GENE 15 13796 - 14395 728 199 aa, chain + ## HITS:1 COG:yihX KEGG:ns NR:ns ## COG: yihX COG1011 # Protein_GI_number: 16131725 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli K12 # 1 199 8 206 206 414 100.0 1e-116 MLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEA LCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEE YPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGIT SILVKDKTTIPDYFAKVLC >gi|299857041|gb|ADWS01000023.1| GENE 16 14389 - 15261 720 290 aa, chain + ## HITS:1 COG:ECs4809 KEGG:ns NR:ns ## COG: ECs4809 COG1295 # Protein_GI_number: 15834063 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 528 100.0 1e-150 MLKTIQDKARHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAA FPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNKMTAVGACGLIVTALLLMYSI DSALNTIWRSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQAAEQEEDDEP >gi|299857041|gb|ADWS01000023.1| GENE 17 15258 - 15695 432 145 aa, chain + ## HITS:1 COG:ECs4810 KEGG:ns NR:ns ## COG: ECs4810 COG1490 # Protein_GI_number: 15834064 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Escherichia coli O157:H7 # 1 145 1 145 145 276 100.0 8e-75 MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNT QTGRFAADMQVSLVNDGPVTFWLQV >gi|299857041|gb|ADWS01000023.1| GENE 18 15740 - 16681 1105 313 aa, chain + ## HITS:1 COG:ECs4811 KEGG:ns NR:ns ## COG: ECs4811 COG0454 # Protein_GI_number: 15834065 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 313 17 329 329 625 100.0 1e-179 MYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEQGNLVAVGR LYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKL GFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQLQQAWYEHIPLSEKMGVRIQ QYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLMLRERHLGGTIILADAHI RYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDETPGAVFEGTYIVLPAK PFGPYEEGGNEEE >gi|299857041|gb|ADWS01000023.1| GENE 19 16745 - 17653 324 302 aa, chain - ## HITS:1 COG:STM4032 KEGG:ns NR:ns ## COG: STM4032 COG0657 # Protein_GI_number: 16767297 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Salmonella typhimurium LT2 # 1 299 1 299 309 479 76.0 1e-135 MALEKGIAELVEKFIAAGRPSSRQQSIAQRREGYIASAVLAGETETRVDIQTIELEGMTL RIVSPLNAPTLLPTIIYYYGGCFVSGGFATHDNQLRQLAYYGQCRVIAVQYRLAPEHTFP AAHDDAQRGAEIVWQHAERLGVDKQRITLAGDSAGGHLALVTALRLKRAGEWQPAQLILI YPMLDATAHFESYIRNGHDYIITRDTLLSGFEMYLPGIERRHPEASPLWRDDFNGLPPVH IITAEYDPLCDEGEALYHRMTGQGVQCTCQRYLGVIHGFFQLGGISEAARSALRDVAWRA GR >gi|299857041|gb|ADWS01000023.1| GENE 20 18194 - 18484 270 96 aa, chain + ## HITS:1 COG:STM4033 KEGG:ns NR:ns ## COG: STM4033 COG2944 # Protein_GI_number: 16767298 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 13 94 1 82 84 135 87.0 2e-32 MDKALFERLTHSMAQMNEIIEGTRQPSRTFEVDAMKIKEIRRASGLSQSKFADLISVSVD TLRNWEQGRRSPTGPAKALLRAIANDPQHVLQALNR >gi|299857041|gb|ADWS01000023.1| GENE 21 19088 - 19306 70 72 aa, chain + ## HITS:1 COG:no KEGG:SFV_3606 NR:ns ## KEGG: SFV_3606 # Name: yiiE # Def: hypothetical protein # Organism: S.flexneri_8401 # Pathway: not_defined # 1 72 49 120 120 126 95.0 2e-28 MAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKRGRQRGET VGVDDQCKEHKE >gi|299857041|gb|ADWS01000023.1| GENE 22 19525 - 19767 125 80 aa, chain + ## HITS:1 COG:no KEGG:SSON_4059 NR:ns ## KEGG: SSON_4059 # Name: yiiF # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 80 1 80 80 143 100.0 2e-33 MNSLAGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPG IWQGCEEDGVEYQRKLREEW >gi|299857041|gb|ADWS01000023.1| GENE 23 20097 - 21026 1016 309 aa, chain - ## HITS:1 COG:ECs4817 KEGG:ns NR:ns ## COG: ECs4817 COG3058 # Protein_GI_number: 15834071 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in formate dehydrogenase formation # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 618 100.0 1e-177 MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLRELAENNPLGDYLRFAALI AHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKHWQKLLMALIAELKPEMSG PALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFIWAALSLYWAQMANLIPGKAR AEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLCETEWHVVRVKCSNCEQSGKLHY WSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAVADDLASLVLDARMEQEGYARSSIN PFLFPGEGE >gi|299857041|gb|ADWS01000023.1| GENE 24 21023 - 21658 574 211 aa, chain - ## HITS:1 COG:ECs4818 KEGG:ns NR:ns ## COG: ECs4818 COG2864 # Protein_GI_number: 15834072 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 390 100.0 1e-108 MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARILHPFV GVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAII FLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITA MVEGWVTSAWAKKHHPRWYREVRKTTEKKAE >gi|299857041|gb|ADWS01000023.1| GENE 25 21655 - 22557 975 300 aa, chain - ## HITS:1 COG:fdoH KEGG:ns NR:ns ## COG: fdoH COG0437 # Protein_GI_number: 16131733 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 300 1 300 300 630 100.0 1e-180 MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKACQVACSEWNDIRDTVG NNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCSDPGCLKACPAEGAIIQ YANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKCTLCVDRVVVGQEPACVKTCP TGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGL PENPEISETVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRADEEENNLHEEKDEERK >gi|299857041|gb|ADWS01000023.1| GENE 26 22570 - 24984 2759 804 aa, chain - ## HITS:1 COG:fdoG KEGG:ns NR:ns ## COG: fdoG COG0243 # Protein_GI_number: 16131734 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 804 213 1016 1016 1682 99.0 0 MTNHWVDIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYY APIRSGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRK YDKSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCE YIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSMMKAF FGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNKNKVIGC LSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENGSIVNSGRW LQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNYAIPHEPKSEE VAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIFAGSWTPEGNQMA RRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQLLKWDGTKWTGWDIP DYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPA ARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAILQPEQFVEIGESLANKLG IAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIGIPIHWGYEGVAKKGFIANTL TPFVGDANTQTPEFKSFLVNVEKV >gi|299857041|gb|ADWS01000023.1| GENE 27 25033 - 25620 507 195 aa, chain - ## HITS:1 COG:fdoG KEGG:ns NR:ns ## COG: fdoG COG0243 # Protein_GI_number: 16131734 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 195 1 195 1016 412 100.0 1e-115 MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLL MYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDK WQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKF SRALGMLAVDNQARV >gi|299857041|gb|ADWS01000023.1| GENE 28 25814 - 26647 603 277 aa, chain + ## HITS:1 COG:ECs4821 KEGG:ns NR:ns ## COG: ECs4821 COG1526 # Protein_GI_number: 15834075 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 572 100.0 1e-163 MKKTQQKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVALVYNGISHVVMMASPK DLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSSRRFMGLKERRRALAGRTG CGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDFQPVGQLTGCTHAAAWMLPSG ELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSSRASYEMVQKSAMCGVEILFAVS AATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLSN >gi|299857041|gb|ADWS01000023.1| GENE 29 26800 - 27840 912 346 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_4426 NR:ns ## KEGG: EcE24377A_4426 # Name: not_defined # Def: putative lipoprotein # Organism: E.coli_E24377A # Pathway: not_defined # 1 346 1 346 346 617 99.0 1e-175 MKRNLLSSAIIVAIMALGLTGCDDKKAETETPPPANSQPAAPAPEAPVAKAEAKPETPAQ PVVDEQAVFDEKMDVYIKCYNKLQIPVQSSLARYADWLKDFKQGPTGEERTVYGIYGISE SNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTQENYKDDAFAK GKTLHQTFLKNLEAFEAVAESYHAAIQEINDKRQLAELKNIEEREGKTFHYYSLAVMISA KQINNLISQEKFDVDAAMKKVSELETLVAQAKEADKGGMNFSFINSAGQYQLEAKKYVRR IRDKVPYSDWDKEQLQDANSSWMVEDSFPRALREYNEMVDDYNSLR >gi|299857041|gb|ADWS01000023.1| GENE 30 27890 - 29638 1065 582 aa, chain - ## HITS:1 COG:ZfrvR_1 KEGG:ns NR:ns ## COG: ZfrvR_1 COG3711 # Protein_GI_number: 15804486 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli O157:H7 EDL933 # 1 463 1 463 463 896 98.0 0 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW PLMQGDYLSSLILAIYALRNQLTDIWPQYPGNEIKQIVEQCGLFLGDNAVRTLTGLIEKQ HQQAQVISADHVLGLLQRVPGIASLNIIDTQLVENITGHLLRCLAAPVWIAEHRQSSMNN LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI ATINQLAIERDVLHCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA AADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG >gi|299857041|gb|ADWS01000023.1| GENE 31 29638 - 30708 1082 356 aa, chain - ## HITS:1 COG:frvX KEGG:ns NR:ns ## COG: frvX COG1363 # Protein_GI_number: 16131738 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Escherichia coli K12 # 1 356 1 356 356 727 98.0 0 MNIELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGSFVARKGNKGPKVAVVG HMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHKGFKIPGVIGSVAPHALTE KQKQQPLSFDEMFIDIGANSREEAEKRGVEIGDFISPEANFACWGEDKVVGKALDNRIGC AMMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEHIKPDVVIVLDTAVAGDVPGIDN IKYPLKLGQGPGLMLFDKRYFPNQKLVAVLKNCAAHNDLPLQFSTMKTGATDGGRYNVMG GGRPVVALCLPTRYLHANSGMISKADYDALLTLIRDFLTTLTAEKVNAFSQFRQVD >gi|299857041|gb|ADWS01000023.1| GENE 32 30698 - 32149 1501 483 aa, chain - ## HITS:1 COG:frvB_2 KEGG:ns NR:ns ## COG: frvB_2 COG1299 # Protein_GI_number: 16131739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 129 483 1 355 355 629 100.0 1e-180 MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAA DYVILATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSELPTNSQLFAADSGVKLGK QEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFGLPYTDMSKGAPSFTWVVESI GYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAI GYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIP PSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDWYAIVGVVALMPPVAAGLA TFIAPKLFTRQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITGVLVIAF GIKRLAPGLGIFDPLIGLMSPVGSFYLVLAIGLALNISFIIVLKGLWLRRKAKAAQQELV HEH >gi|299857041|gb|ADWS01000023.1| GENE 33 32160 - 32606 337 148 aa, chain - ## HITS:1 COG:frvA KEGG:ns NR:ns ## COG: frvA COG1762 # Protein_GI_number: 16131740 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 1 148 1 148 148 286 97.0 1e-77 MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGV AVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRK IIHQDFIHQLQQGDADQVLALLNQTLSS >gi|299857041|gb|ADWS01000023.1| GENE 34 32907 - 33221 330 104 aa, chain - ## HITS:1 COG:yiiL KEGG:ns NR:ns ## COG: yiiL COG3254 # Protein_GI_number: 16131741 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 104 1 104 104 198 99.0 2e-51 MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFATVEIES EERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP >gi|299857041|gb|ADWS01000023.1| GENE 35 33231 - 34055 969 274 aa, chain - ## HITS:1 COG:ECs4829 KEGG:ns NR:ns ## COG: ECs4829 COG0235 # Protein_GI_number: 15834083 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 274 1 274 274 567 98.0 1e-162 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIALYHDNFHPQPRYIPLSQ PMPLLANTPFIVTGSGKFFRNVQLDPAANLGVVKVDSDGAGYHILWGLTNEAVPTSELPA HFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGV GILPWMVPGTDEIGQATAQEMQKHSLVLWSFHGVFGSGPTLDETFGLIDTAEKSAQVLVK VYSMGGMKQTISREELIALGKRFGVTPLASALAL >gi|299857041|gb|ADWS01000023.1| GENE 36 34230 - 35489 1350 419 aa, chain - ## HITS:1 COG:rhaA KEGG:ns NR:ns ## COG: rhaA COG4806 # Protein_GI_number: 16131743 # Func_class: G Carbohydrate transport and metabolism # Function: L-rhamnose isomerase # Organism: Escherichia coli K12 # 1 419 1 419 419 850 98.0 0 MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQ ATGNYPGKARNASELRTDLEQAMRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVE WAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHCKASRRVSAYFGEQLGTPS VMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVG SNEFYLGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVL LDDETQAIASEIVRHDLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAEL RKLEAAGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSEWLESVRAYEKAILSQRG >gi|299857041|gb|ADWS01000023.1| GENE 37 35486 - 36955 1235 489 aa, chain - ## HITS:1 COG:ECs4831 KEGG:ns NR:ns ## COG: ECs4831 COG1070 # Protein_GI_number: 15834085 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli O157:H7 # 1 489 1 489 489 1004 98.0 0 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFKNGLHSQNGYVTWNVDSLESAI RLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRSNGLMAQAQQQLGK RDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMNWEYTNAT TTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGL WLLQRVLQERQINDLPALIAATQALPACRFIINPNDDRFINPEAMCSEIQAACRETAQPI PESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIR VIAGPVEASTLGNIGIQLMTLDELNNVDNFRQVVSTTANLTTFTPNPDSEIAHYVAQIHS TRQTKELCA >gi|299857041|gb|ADWS01000023.1| GENE 38 37243 - 38079 488 278 aa, chain + ## HITS:1 COG:rhaS KEGG:ns NR:ns ## COG: rhaS COG2207 # Protein_GI_number: 16131745 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 278 1 278 278 534 100.0 1e-152 MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL EDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVT DIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ >gi|299857041|gb|ADWS01000023.1| GENE 39 38027 - 38161 102 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRHRGYLGQRTKLIIRNMAYKYVEKIRVIAENHPVPDEYHAVTS >gi|299857041|gb|ADWS01000023.1| GENE 40 38153 - 39001 553 282 aa, chain + ## HITS:1 COG:ECs4833 KEGG:ns NR:ns ## COG: ECs4833 COG2207 # Protein_GI_number: 15834087 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 282 31 312 312 576 99.0 1e-164 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFSASAGQPHWRLGS VGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD >gi|299857041|gb|ADWS01000023.1| GENE 41 38998 - 40032 1351 344 aa, chain - ## HITS:1 COG:rhaT KEGG:ns NR:ns ## COG: rhaT COG0697 # Protein_GI_number: 16131747 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 344 1 344 344 601 98.0 1e-172 MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPN FWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI INGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLVLAVM CGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVIIMGGGAIINLGFCFIRLAKVK DLSLKADFSLAKPLITHNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYV LCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVAANIVGIGMAN >gi|299857041|gb|ADWS01000023.1| GENE 42 40317 - 40937 573 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 206 1 201 201 225 54 6e-58 MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITK LDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKA AASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQN RRPDYIKEFWNVVNWDEAAARFAAKK >gi|299857041|gb|ADWS01000023.1| GENE 43 41191 - 42180 965 329 aa, chain + ## HITS:1 COG:no KEGG:ECSE_4198 NR:ns ## KEGG: ECSE_4198 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: E.coli_SE11 # Pathway: not_defined # 1 329 13 341 341 500 99.0 1e-140 MEMQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCM GASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAM DMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPF LVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTG IPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVT SILVPILTSIWSRKVKARAAKIEILGTVK >gi|299857041|gb|ADWS01000023.1| GENE 44 42329 - 43003 570 224 aa, chain + ## HITS:1 COG:yiiM KEGG:ns NR:ns ## COG: yiiM COG2258 # Protein_GI_number: 16131750 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 224 11 234 234 462 100.0 1e-130 MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQAEKKVHGGPDRALCHY PREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPC YKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWH MPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK >gi|299857041|gb|ADWS01000023.1| GENE 45 43109 - 44482 1419 457 aa, chain - ## HITS:1 COG:ECs4837 KEGG:ns NR:ns ## COG: ECs4837 COG0642 # Protein_GI_number: 15834091 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 816 100.0 0 MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELAND PPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQK KKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLL WLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQ RLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQK NALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRN ALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLG LAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS >gi|299857041|gb|ADWS01000023.1| GENE 46 44479 - 45177 816 232 aa, chain - ## HITS:1 COG:ECs4838 KEGG:ns NR:ns ## COG: ECs4838 COG0745 # Protein_GI_number: 15834092 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 232 1 232 232 410 100.0 1e-114 MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGI DTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHW SEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREH LSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS >gi|299857041|gb|ADWS01000023.1| GENE 47 45327 - 45827 248 166 aa, chain + ## HITS:1 COG:ECs4839 KEGG:ns NR:ns ## COG: ECs4839 COG3678 # Protein_GI_number: 15834093 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli O157:H7 # 1 151 2 152 167 211 100.0 5e-55 MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSHMFDGISLTEHQRQQMR DLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKMANEQIARQVEMAKVRNQM YRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSLKLLSSSNSRSQ >gi|299857041|gb|ADWS01000023.1| GENE 48 45975 - 46877 536 300 aa, chain + ## HITS:1 COG:ECs4840 KEGG:ns NR:ns ## COG: ECs4840 COG0053 # Protein_GI_number: 15834094 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Escherichia coli O157:H7 # 1 300 1 300 300 558 100.0 1e-159 MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVV RYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIV TIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADA LFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSWPGVSGAHDLRTRQSG PTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSVVPREGKRSMLS >gi|299857041|gb|ADWS01000023.1| GENE 49 47058 - 48020 1241 320 aa, chain + ## HITS:1 COG:ECs4841 KEGG:ns NR:ns ## COG: ECs4841 COG0205 # Protein_GI_number: 15834095 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 634 100.0 0 MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSD MINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPC IGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSSHQRISVVEVMGRYCGDLTLA AAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFIEKETG RETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHHDIIDA IENMKRPFKGDWLDCAKKLY >gi|299857041|gb|ADWS01000023.1| GENE 50 48339 - 49328 1272 329 aa, chain + ## HITS:1 COG:sbp KEGG:ns NR:ns ## COG: sbp COG1613 # Protein_GI_number: 16131755 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 329 1 329 329 647 99.0 0 MNKWGVGLTFLLAATNVMAKDIQLLNVSYDPTRELYEQYNKAFSAHWKQQTGDNVVIRQS HGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWIKRLPDNSAPYTSTIVFLV RKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAQDFVRA LYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLAANELGKDKFEIVTPSESILAEP TVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAKNYYRPRDAEVAKKYENAFPKLKLF TIDEEFGGWTKAQKEHFANGGTFDQISKR >gi|299857041|gb|ADWS01000023.1| GENE 51 49435 - 50190 558 251 aa, chain + ## HITS:1 COG:ECs4843 KEGG:ns NR:ns ## COG: ECs4843 COG2134 # Protein_GI_number: 15834097 # Func_class: I Lipid transport and metabolism # Function: CDP-diacylglycerol pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 511 99.0 1e-145 MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKP NAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVP DRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDKNLANISSRWLPLPGGLRGHEYLAR RVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQSDNSFVLLATQRNLLTLNRASAE EIQDHECEILR >gi|299857041|gb|ADWS01000023.1| GENE 52 50245 - 51012 885 255 aa, chain - ## HITS:1 COG:ECs4844 KEGG:ns NR:ns ## COG: ECs4844 COG0149 # Protein_GI_number: 15834098 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 454 100.0 1e-128 MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIM LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQG LTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATP AQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKAD AFAVIVKAAEAAKQA >gi|299857041|gb|ADWS01000023.1| GENE 53 51120 - 51719 611 199 aa, chain - ## HITS:1 COG:no KEGG:B21_03754 NR:ns ## KEGG: B21_03754 # Name: yiiQ # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 199 1 199 199 349 100.0 3e-95 MKPGCTLFFLLCSALTVTTTAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSL PLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAK AKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYYTETEGALRYVVADNGEKGLT FAVEPIKLALSESLEGLNK >gi|299857041|gb|ADWS01000023.1| GENE 54 51820 - 52260 431 146 aa, chain + ## HITS:1 COG:ECs4846 KEGG:ns NR:ns ## COG: ECs4846 COG3152 # Protein_GI_number: 15834100 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 146 1 146 146 259 99.0 8e-70 MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDIQTAAFCLVCLLWPTAA VTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVGRFVPTLILVMMLIDLGAF IGTQGENKYGKDTQDVKYKADNKSSN >gi|299857041|gb|ADWS01000023.1| GENE 55 52472 - 52771 349 99 aa, chain + ## HITS:1 COG:ECs4847 KEGG:ns NR:ns ## COG: ECs4847 COG3691 # Protein_GI_number: 15834101 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 99 1 99 99 160 100.0 6e-40 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAAASSADEG ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA >gi|299857041|gb|ADWS01000023.1| GENE 56 52798 - 53226 387 142 aa, chain + ## HITS:1 COG:yiiT KEGG:ns NR:ns ## COG: yiiT COG0589 # Protein_GI_number: 16131761 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli K12 # 1 142 1 142 142 280 100.0 4e-76 MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQ LLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLM PAYRGMINKMSADLLIVPFIDK >gi|299857041|gb|ADWS01000023.1| GENE 57 53231 - 53977 880 248 aa, chain - ## HITS:1 COG:ECs4849 KEGG:ns NR:ns ## COG: ECs4849 COG1018 # Protein_GI_number: 15834103 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 503 99.0 1e-142 MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEIDGERVQRAYSYVNSPDN PDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPDCETLWMLATGTAIGP YLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGS LTGRIPALIESGELESAIGLPMNKETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPG HMTAEHYW >gi|299857041|gb|ADWS01000023.1| GENE 58 54074 - 55213 1350 379 aa, chain - ## HITS:1 COG:glpX KEGG:ns NR:ns ## COG: glpX COG1494 # Protein_GI_number: 16131763 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Escherichia coli K12 # 44 379 1 336 336 631 99.0 0 MPNEAFMPHPVVPKRAGATPHTSIIPPIPCATLRAIPYCLEFAMRRELAIEFSRVTESAA LAGYKWLGRGDKNTADGAAVNAMRIMLNQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRG DAVDIAVDPIEGTRMTAMGQANALAVLAVGDKGCFLNAPDMYMEKLIVGPGAKGTVDLNL PLADNLRNVAAALGKPLSELTVTILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCM PDSEVDVLYGIGGAPEGVVSAAVIRALDGDMNGRLLARHDVKGDNEENRRIGEQELARCK AMGIEAGKVLRLGDMARSDNVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRR IQSIHYLDRKDPEMQVHIL >gi|299857041|gb|ADWS01000023.1| GENE 59 55219 - 56727 1886 502 aa, chain - ## HITS:1 COG:ECs4851 KEGG:ns NR:ns ## COG: ECs4851 COG0554 # Protein_GI_number: 15834105 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Escherichia coli O157:H7 # 1 502 1 502 502 1023 100.0 0 MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSST LVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDG LEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVH VTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPI SGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVN YALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPY ARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLM QFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTER NYRYAGWKKAVKRAMAWEEHDE >gi|299857041|gb|ADWS01000023.1| GENE 60 56750 - 57595 780 281 aa, chain - ## HITS:1 COG:ECs4852 KEGG:ns NR:ns ## COG: ECs4852 COG0580 # Protein_GI_number: 15834106 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli O157:H7 # 1 281 1 281 281 533 100.0 1e-151 MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTA GVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHH IVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAP LLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGP IVGAIVGAFAYRKLIGRHLPCDICVVEEKETTTPSEQKASL >gi|299857041|gb|ADWS01000023.1| GENE 61 58026 - 58265 501 79 aa, chain + ## HITS:1 COG:ECs4853 KEGG:ns NR:ns ## COG: ECs4853 COG3074 # Protein_GI_number: 15834107 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 79 3 81 81 85 100.0 2e-17 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKE QQNGWQERLQALLGRMEEV >gi|299857041|gb|ADWS01000023.1| GENE 62 58350 - 58835 555 161 aa, chain - ## HITS:1 COG:ECs4856 KEGG:ns NR:ns ## COG: ECs4856 COG0684 # Protein_GI_number: 15834110 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Escherichia coli O157:H7 # 1 161 1 161 161 299 100.0 1e-81 MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRV LVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAA GEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDIE >gi|299857041|gb|ADWS01000023.1| GENE 63 58928 - 59854 1078 308 aa, chain - ## HITS:1 COG:menA KEGG:ns NR:ns ## COG: menA COG1575 # Protein_GI_number: 16131768 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Escherichia coli K12 # 1 308 1 308 308 572 100.0 1e-163 MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPLVALLALITAGLLQILS NLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIITVVLICLSGLALVAVACHT LADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLVFFGWLSVMGSWYLQAHTLIP ALILPATACGLLATAVLNINNLRDINSDRENGKNTLVVRLGEVNARRYHACLLMGSLVCL ALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDPVAMRPMLERTVKGALLTNLLFVLG IFLSQWAA >gi|299857041|gb|ADWS01000023.1| GENE 64 59921 - 61252 1202 443 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 4 443 8 466 466 467 52 1e-131 MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTG VGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNR YRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDLAAA PMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELK QDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTD HILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMA TEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQTIII DADYVSKHLDALVADEDLSRFIL >gi|299857041|gb|ADWS01000023.1| GENE 65 61262 - 61792 596 176 aa, chain - ## HITS:1 COG:ECs4859 KEGG:ns NR:ns ## COG: ECs4859 COG5405 # Protein_GI_number: 15834113 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease HslVU (ClpYQ), peptidase subunit # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 332 100.0 3e-91 MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFEL FERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDL IAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELSYKA >gi|299857041|gb|ADWS01000023.1| GENE 66 61885 - 62739 756 284 aa, chain - ## HITS:1 COG:ECs4860 KEGG:ns NR:ns ## COG: ECs4860 COG3087 # Protein_GI_number: 15834114 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 # 1 284 36 319 319 389 99.0 1e-108 MVAIAAAVLVTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPG VRAPTEPSAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQR QRQAQQLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDLLQTPA HTTAQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDS KITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG >gi|299857041|gb|ADWS01000023.1| GENE 67 62936 - 63961 909 341 aa, chain - ## HITS:1 COG:ECs4861 KEGG:ns NR:ns ## COG: ECs4861 COG1609 # Protein_GI_number: 15834115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 686 99.0 0 MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGR NVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLII TKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLY EQGHKRIGCIAGPEEMPLCHYRLQGYVQALHRCGIMVDPQYIARGDFTFEAGSKAMQQLL DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPR YEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIRGSTRALP >gi|299857041|gb|ADWS01000023.1| GENE 68 64117 - 66315 2013 732 aa, chain - ## HITS:1 COG:priA KEGG:ns NR:ns ## COG: priA COG1198 # Protein_GI_number: 16131773 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Escherichia coli K12 # 1 732 1 732 732 1464 98.0 0 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNEL KAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPATNAPMWYWFA TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQANNQ VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI LSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRK VKWVLDVDPIEG >gi|299857041|gb|ADWS01000023.1| GENE 69 66518 - 66730 384 70 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804527|ref|NP_290567.1| 50S ribosomal protein L31 [Escherichia coli O157:H7 EDL933] # 1 70 1 70 70 152 100 5e-36 MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRF NKRFNIPGSK >gi|299857041|gb|ADWS01000023.1| GENE 70 66890 - 67673 575 261 aa, chain + ## HITS:1 COG:ECs4864 KEGG:ns NR:ns ## COG: ECs4864 COG3209 # Protein_GI_number: 15834118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 261 1 261 1394 530 98.0 1e-150 MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPG ETDIALPAPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRS LYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQ GPWWVLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDG AGRHFRLVLTTQAQRAEEARQ Prediction of potential genes in microbial genomes Time: Sun May 15 22:28:55 2011 Seq name: gi|299857040|gb|ADWS01000024.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont23.1, whole genome shotgun sequence Length of sequence - 66570 bp Number of predicted genes - 56, with homology - 55 Number of transcription units - 27, operones - 13 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.500 - CDS 3 - 693 736 ## COG1064 Zn-dependent alcohol dehydrogenases 2 1 Op 2 11/0.000 - CDS 780 - 1736 850 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 3 1 Op 3 21/0.000 - CDS 1733 - 2704 921 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 4 1 Op 4 16/0.000 - CDS 2697 - 4181 190 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 - Term 4190 - 4220 3.0 5 1 Op 5 1/1.000 - CDS 4230 - 5213 1103 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 5294 - 5353 4.8 6 2 Tu 1 . - CDS 5467 - 5877 271 ## COG4405 Uncharacterized protein conserved in bacteria - Prom 6069 - 6128 5.9 7 3 Op 1 3/0.500 - CDS 6176 - 7558 1446 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 8 3 Op 2 . - CDS 7568 - 8518 1110 ## COG0549 Carbamate kinase - Prom 8575 - 8634 6.6 9 4 Op 1 . - CDS 8661 - 10079 1742 ## ECO103_0299 hypothetical protein 10 4 Op 2 . - CDS 10079 - 11626 1992 ## COG0074 Succinyl-CoA synthetase, alpha subunit 11 4 Op 3 . - CDS 11616 - 12479 361 ## EC55989_0322 hypothetical protein 12 4 Op 4 . - CDS 12519 - 13124 602 ## COG0666 FOG: Ankyrin repeat - Prom 13158 - 13217 4.0 13 5 Op 1 . + CDS 13382 - 13879 415 ## B21_00276 hypothetical protein 14 5 Op 2 . + CDS 13971 - 14903 884 ## COG0583 Transcriptional regulator 15 6 Tu 1 . - CDS 14945 - 16033 827 ## COG2200 FOG: EAL domain - Term 16103 - 16155 5.1 16 7 Tu 1 . - CDS 16175 - 20224 3019 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 20245 - 20304 3.3 17 8 Tu 1 . - CDS 20731 - 22764 2071 ## COG1292 Choline-glycine betaine transporter - Prom 22816 - 22875 3.0 + Prom 22747 - 22806 5.0 18 9 Op 1 6/0.000 + CDS 22875 - 23480 566 ## COG1309 Transcriptional regulator 19 9 Op 2 10/0.000 + CDS 23494 - 24966 1664 ## COG1012 NAD-dependent aldehyde dehydrogenases 20 9 Op 3 . + CDS 24980 - 26650 1627 ## COG2303 Choline dehydrogenase and related flavoproteins + Term 26757 - 26787 0.4 + Prom 26677 - 26736 1.8 21 10 Tu 1 . + CDS 26863 - 27183 184 ## ECO111_0344 putative inner membrane protein + Term 27344 - 27372 1.6 + Prom 27399 - 27458 4.7 22 11 Tu 1 . + CDS 27503 - 27700 106 ## EC55989_0311 hypothetical protein + Term 27881 - 27924 1.0 - Term 27622 - 27660 8.8 23 12 Op 1 13/0.000 - CDS 27774 - 28469 596 ## COG1556 Uncharacterized conserved protein 24 12 Op 2 17/0.000 - CDS 28462 - 29889 1116 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 25 12 Op 3 3/0.500 - CDS 29900 - 30619 513 ## COG0247 Fe-S oxidoreductase - Prom 30742 - 30801 7.4 26 13 Tu 1 . - CDS 31146 - 32000 325 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 32110 - 32169 7.7 + Prom 32051 - 32110 4.4 27 14 Op 1 . + CDS 32226 - 33551 383 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 28 14 Op 2 . + CDS 33648 - 33896 93 ## G2583_0402 hypothetical protein 29 14 Op 3 . + CDS 33908 - 34501 536 ## COG3059 Predicted membrane protein 30 15 Tu 1 . - CDS 34665 - 35531 678 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 35583 - 35642 4.9 + Prom 35583 - 35642 2.9 31 16 Tu 1 . + CDS 35780 - 36637 423 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 36694 - 36734 8.4 - Term 36673 - 36735 9.6 32 17 Tu 1 . - CDS 36758 - 41011 2950 ## ECSE_0316 putative invasin - Prom 41218 - 41277 7.3 + Prom 41967 - 42026 4.4 33 18 Tu 1 . + CDS 42127 - 42228 105 ## 34 19 Op 1 6/0.000 + CDS 42588 - 42854 457 ## PROTEIN SUPPORTED gi|191165768|ref|ZP_03027607.1| 50S ribosomal protein L31 type B 35 19 Op 2 . + CDS 42851 - 42994 241 ## PROTEIN SUPPORTED gi|26246304|ref|NP_752343.1| 50S ribosomal protein L36 + Term 43020 - 43057 2.8 + Prom 43876 - 43935 6.1 36 20 Op 1 . + CDS 44079 - 44621 222 ## COG2771 DNA-binding HTH domain-containing proteins 37 20 Op 2 . + CDS 44696 - 45283 602 ## ECIAI1_0294 common pilus ECP + Term 45300 - 45332 3.0 38 21 Op 1 . + CDS 45341 - 46009 450 ## JW0286 hypothetical protein 39 21 Op 2 . + CDS 46035 - 48560 1907 ## ECO103_0268 putative outer membrane usher protein 40 21 Op 3 . + CDS 48574 - 50193 943 ## ECIAI1_0291 putative surface or exported protein 41 21 Op 4 . + CDS 50162 - 50872 365 ## ECSE_0307 hypothetical protein + Term 51120 - 51160 3.2 - Term 51713 - 51742 -0.9 42 22 Tu 1 . - CDS 51762 - 52133 234 ## COG3477 Predicted periplasmic/secreted protein 43 23 Op 1 15/0.000 + CDS 52791 - 53480 454 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 44 23 Op 2 12/0.000 + CDS 53477 - 54433 585 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 45 23 Op 3 6/0.000 + CDS 54430 - 56628 1646 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 46 23 Op 4 2/0.500 + CDS 56638 - 57594 549 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 47 23 Op 5 . + CDS 57573 - 57983 309 ## COG0583 Transcriptional regulator - Term 58459 - 58498 3.4 48 24 Tu 1 . - CDS 58513 - 59025 -134 ## DP2255 hypothetical protein - Prom 59119 - 59178 3.6 49 25 Op 1 . - CDS 59704 - 62037 1144 ## COG3378 Predicted ATPase 50 25 Op 2 . - CDS 62052 - 62375 187 ## SNSL254_A4846 hypothetical protein 51 25 Op 3 . - CDS 62372 - 62596 256 ## ECO26_5446 hypothetical protein 52 25 Op 4 . - CDS 62596 - 62787 217 ## ECO26_5445 putative repressor protein - Term 62985 - 63013 -1.0 53 26 Tu 1 . - CDS 63141 - 63401 256 ## COG3311 Predicted transcriptional regulator 54 27 Op 1 . + CDS 64305 - 65057 545 ## ECO26_5443 putative head size determination protein 55 27 Op 2 . + CDS 65054 - 65608 253 ## ECO26_5442 putative polarity suppression protein 56 27 Op 3 . + CDS 65610 - 65882 187 ## ECO26_5441 putative transcription activator + Term 65906 - 65934 -1.0 Predicted protein(s) >gi|299857040|gb|ADWS01000024.1| GENE 1 3 - 693 736 230 aa, chain - ## HITS:1 COG:ECs0379 KEGG:ns NR:ns ## COG: ECs0379 COG1064 # Protein_GI_number: 15829633 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli O157:H7 # 1 230 1 230 349 443 99.0 1e-124 MKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP GHEIVGRVVAVGDQVEKHAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPD EPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGV VGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADE >gi|299857040|gb|ADWS01000024.1| GENE 2 780 - 1736 850 318 aa, chain - ## HITS:1 COG:ECs0378 KEGG:ns NR:ns ## COG: ECs0378 COG1172 # Protein_GI_number: 15829632 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 491 99.0 1e-139 MKKSWRNNVEFYLIGLLVLTVAAFSITMPEIFWSISNFQSVASQMPVLGILALAMAVTML CGGINLSIIATANACSLVMAWVATQYPPGIATVVATLLAGAGAAVIIGLCNGVLIAGIRV SPILATLGMMTLLKGINILVTGGSAIANYPSWVLWLNHAQWFGIPLPMWLFAAVALGLWI LLEKTPLGKAIYLIGSNERATLYSGINTRRVLIWVYVISALLCAVAAFLMMSKLNSAKAS YGESYLLVSILAAVLGGVNPDGGSGRIIGMVLALFLLQIIESGFNILGISPYLTMALWGT LLLCFIQVRGMLGLDRVV >gi|299857040|gb|ADWS01000024.1| GENE 3 1733 - 2704 921 323 aa, chain - ## HITS:1 COG:ECs0377 KEGG:ns NR:ns ## COG: ECs0377 COG1172 # Protein_GI_number: 15829631 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 534 100.0 1e-151 MAELKKRHEFWLALLIVVLFVGLAWRSDEFLTFGNLYDLANNYAMLTILACGLFVVLISG GIDISFPAMTIIAQYGMVLLLQKIGGNFAVAFALAGCIGILLGLINALLVNRLRVPSIII TISTLNIFYGLLLWLSKGVWLYDFPPWFEQGVMLFKYTDADGYDYGLGLPLIAMITVVLL TAFIMNFTSVGRKIYALGGNRESASRIGFSVLKLQLFVYGYMGLMSGAAGVVQSWTVMTV APDSLLGYELTVLAAVVLGGTSLLGGRGTLTGTLLGVVLLAVMQNGLNLLGVSSYWQTLI TGIIIVASISATAWSQHQNRSLL >gi|299857040|gb|ADWS01000024.1| GENE 4 2697 - 4181 190 494 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 254 477 8 224 312 77 25 1e-13 METFLSLRHINKTFHATRALRDVSLDFMSGEVHCLAGQNGCGKSTLIKIMSGVYRPDEGA EITLGGKNWSKLTPAASVAQGIQVIYQDLSLFPNLSVWENIAVNHYHHGLFVNRRRLREV AQAAMTSINVTLPLDTLVSELSIARCQLVAICRALAQDARLIVMDEPTASLTHQEVQGLL QVVHQLRERGICVVFVSHRLEEVMEVSDRISVLKDGELVGTFPAAEMTTKQLGFLMSGQE FEYQVRELWQGKSSTPVLEVRNLSRHGEYLNINLRVEAGEVVSIVGLLGAGRTELCLSLF GMTRPDAGEILINGQPVTLHSNQDAIRHGIGYVSEDRMSRGLVMAQSIEDNIISTVFHKV KDRFGFLSETKVRDLVDRLIKALTIKVSDPHLPVNTLSGGNAQRVSIAKWLAIGPRLLIL DSPTVGVDIANKAGIYGIISDLAAHGIAVLMICDEIEEAWYQSHRILVMQKGQITHSFLP DSSSQARIAEVVNG >gi|299857040|gb|ADWS01000024.1| GENE 5 4230 - 5213 1103 327 aa, chain - ## HITS:1 COG:ECs0374 KEGG:ns NR:ns ## COG: ECs0374 COG1879 # Protein_GI_number: 15829628 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 327 2 328 328 627 99.0 1e-180 MNKRFVINMVSSLLLGAALISAPLQAAEKVVVNISKVDGMPWFNRMGEGVVEAGKAFGVN ASQVGPSSTDAPQQVKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAGIVVLTNESPG QPSANWDIEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKEH YPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKNK VAVYGMMIPSQAASLIKSGDITEGITYDPASAGYALAAVASTLLKGEEIKPGLEMQNLGK ADVDMDKRIIRFHKVLLVNKDNIDSLY >gi|299857040|gb|ADWS01000024.1| GENE 6 5467 - 5877 271 136 aa, chain - ## HITS:1 COG:Z0414 KEGG:ns NR:ns ## COG: Z0414 COG4405 # Protein_GI_number: 15800048 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 136 1 136 136 279 99.0 8e-76 MTIKEKFSQKYPHASFCTFGDSAALADHLATLIATGVKTASCGSLAGCIEDNAFPMIGEY KIVENSRGEPVCVIRVIGLHLLRFSDVTVELARKEGEGDLSLEYWRNEHRRFFQAEGSYS PEMDVIFEEYALIDVV >gi|299857040|gb|ADWS01000024.1| GENE 7 6176 - 7558 1446 460 aa, chain - ## HITS:1 COG:yahJ KEGG:ns NR:ns ## COG: yahJ COG0402 # Protein_GI_number: 16128309 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 460 1 460 460 915 98.0 0 MKESNSRREFLSQSGKMVTAAALFGTSVPLAHAAVAGTLNCEANNTMKITDPHYYLDNVL LETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDM HIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTI ARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAAINYMVETVEKTPQL KGKLTISHAFALATLNEQQVDALANRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTG TDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKA QDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG >gi|299857040|gb|ADWS01000024.1| GENE 8 7568 - 8518 1110 316 aa, chain - ## HITS:1 COG:yahI KEGG:ns NR:ns ## COG: yahI COG0549 # Protein_GI_number: 16128308 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 316 1 316 316 578 98.0 1e-165 MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLD LRRAEIAHEREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDK NDPGFAHPTKPIGAFFSESQRDKLQKANPDWCFVEDAGRGYRRVVASPEPKRIVEAPAIK ALIQQGFVVIGAGGGGIPVVRTEAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEK VCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIITTPEC LPAALRGETGTHIIKT >gi|299857040|gb|ADWS01000024.1| GENE 9 8661 - 10079 1742 472 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0299 NR:ns ## KEGG: ECO103_0299 # Name: yahG # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 472 1 472 472 944 100.0 0 MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLAD KIAAANQQALERIIQSHPVLIGFDQAINVVPGMTPKTILHAGPPITWEKMCGAMKGAVTG ALVFEGLAKDLDEATELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAY TNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPMLRDAMKIIGEIDLRLMLAQALHMGDE CHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAH GIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAIT ETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAID ITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV >gi|299857040|gb|ADWS01000024.1| GENE 10 10079 - 11626 1992 515 aa, chain - ## HITS:1 COG:yahF KEGG:ns NR:ns ## COG: yahF COG0074 # Protein_GI_number: 16128305 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli K12 # 1 515 1 515 515 972 98.0 0 MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELEQA KNGDLMIVINGKAGADNEQLLVEIEELFNSKAQSGSHEARYATIASAKKHIPESNLAVIS VNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAA LCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAI GMLENDPQTEIIALISKPPAPAVARKVLERARACRKPVVVCFLGRVETPVDEQGLQFARG SKEAALKAVMLSGVKQENLDLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETMFAV MEKHGDVYSNIQPDPEFRLQDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEA RDPEVAVIVMDFVLGFGSHEDPVGSTIEAIKEAKAIAAAEGRELIILAYVLGTDLDTPSL EQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA >gi|299857040|gb|ADWS01000024.1| GENE 11 11616 - 12479 361 287 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0322 NR:ns ## KEGG: EC55989_0322 # Name: yahE # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 287 1 287 287 599 100.0 1e-170 MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFD DLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAVNFHLIAWLQWHDIIHQHL GENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNEKQNIAAAVASMIGLGIGLTPSADD YLTGLALILFIPGHPSEKYKEEFYLGMQRGRNNTTLLSAITLEAALQQRCRENIHRFIHN IIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS >gi|299857040|gb|ADWS01000024.1| GENE 12 12519 - 13124 602 201 aa, chain - ## HITS:1 COG:yahD KEGG:ns NR:ns ## COG: yahD COG0666 # Protein_GI_number: 16128303 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli K12 # 1 201 1 201 201 395 100.0 1e-110 MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALID AGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSI VKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTP LELARERGFEEIAQLLIAAGA >gi|299857040|gb|ADWS01000024.1| GENE 13 13382 - 13879 415 165 aa, chain + ## HITS:1 COG:no KEGG:B21_00276 NR:ns ## KEGG: B21_00276 # Name: yahC # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 165 1 165 165 252 100.0 3e-66 MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLA VNYSGMVWAFFAALAAGWLASVSGLSAFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLG MTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTKRDGY >gi|299857040|gb|ADWS01000024.1| GENE 14 13971 - 14903 884 310 aa, chain + ## HITS:1 COG:yahB KEGG:ns NR:ns ## COG: yahB COG0583 # Protein_GI_number: 16128301 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 310 1 310 310 629 99.0 1e-180 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE LTESGRYFFRKATDLLNDFYAIKRSIDTISQGIEARVRICINQLLDTPKHTARLLQVLKK QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG IGFLPDYMVREAMAQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG IYQDLLHREN >gi|299857040|gb|ADWS01000024.1| GENE 15 14945 - 16033 827 362 aa, chain - ## HITS:1 COG:ZyahA_2 KEGG:ns NR:ns ## COG: ZyahA_2 COG2200 # Protein_GI_number: 15800038 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 EDL933 # 98 362 1 265 265 556 99.0 1e-158 MASHDLSVFLEEFGATVNLTLPGIVSEKERLLLKLLMEGMSVTEISQYRNRSAKTISHQK KQLYEKLGIQSDITFWRDIFFQYHPQVISGTGNKNNFYIPDNRCHHIVTPEAISLALENH EFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQT ADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVKKLGNDKIKLVLELTERNPIP VTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGH IVDNIIELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKA GG >gi|299857040|gb|ADWS01000024.1| GENE 16 16175 - 20224 3019 1349 aa, chain - ## HITS:1 COG:ECs0362_2 KEGG:ns NR:ns ## COG: ECs0362_2 COG3468 # Protein_GI_number: 15829616 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 813 1349 1 537 537 898 99.0 0 MAFNALLFMQSWFYLDVLLEIVMNKIYRLKWNRSRNCWSVCSELGSRVKGKKSRAVLISA ISLYSSLVFADDVIVNQDKAIDFGKENQSIDYRITVTDNANLVINATDTSRPRLTLASGG GLDITGGKVTINGPLNFLLKGTGFLNVSNAGSELYADDLYESNSGMRHDRGYFNVSNGGK IHVKGTSRLTYLQGNVSGEGSQVNSKTFFMGVYGSYGGNQYLSVNNGGEVNASEKISLGY YDQNSDTTLAVSEGGKISAPTISLSTNSELALGAQEGSAAKAAGIIDAEKIEFVWAKTSE KKITLNHTDKNATISADIISDSEGLGYINALNGTTYLTGDNSAFSGKVKIEQNGALGITQ NIGTAEINNRGKLHLKADDSMTFANKISGNGTISIDSGTVALTGNNYAFSGYIDVASGAV AVISEDKNIGRADLDVDGKLQINANKDWVFDNDLQGRGIVEINMGNHEFSFDEFAYTDWF QGSLAFQNTTFNLEKNAEFLQRGGITAGQGSLVTVGKGAHSISTLGFSGGTVDFGALTAG AQMTEGTVNVSKTLDLRGEGVIQVSDSDVVSSVSRDIDSALSLTEVDDGNSTIKLVDAQG AEVLGDAGNLQLQDKNGQILSSSAQRDIQQNGQKAAVGTYDYRLTSGVNNDGLYIGYGLT QLDLHATDSDALVLSSNGKSENAADLSAKITGSGDLAFSSQKDQTVSLSNKDNDYTGVTD LRSGTLLLNNDNVLGNTHELRLAAETELDMNGHSQTVGTLNGSADSLLSLNGGSLTVTNG GTSTGSLTGSGELNIQGGTLDIAGDNSNLTANVNIANSANVLVSHAQGLGSANVENNGTL ALNNSAEKRAAASVNYTLGGNLTNNGTLMTGMSGQQAGNVLVVKGNYHGNNGQLVMNTVL NGDDSVTDKLVVEGDTSGTTAVTVNNAGGTGAKTLNGIELIHVDGKSEGEFVQAGRIVAG AYDYTLARGQGANSGNWYLTSGSDSPELQPEPDPMPNPEPNPNPEPNPNPTPTPGPDLNV DNDLRPEAGSYIANLAAANTMFTTRLHERLGNTYYTDMVTGEQKQTTMWMRHEGGHNKWR DGSGQLKTQSNRYVLQLGGDVAQWSQNGSDSWHVGVMAGYGNSDSKTISSRTGYRAKASV NGYSTGLYATWYADDESRNGAYLDSWAQYSWFDNTVKGDDLQSESYKSKGFTASLEAGYK HKLAEFNGSQGTRNEWYVQPQAQVTWMGVKADKHRESNGTLVHSNGDGNVQTRLGVKTWL KSHHKMDDGKSREFQPFVEVNWLHNSKDFSTSMDGVSVTQDGARNIAEIKTGVEGQLNAN LNVWGNVGVQVADRGYNDTSAMVGIKWQF >gi|299857040|gb|ADWS01000024.1| GENE 17 20731 - 22764 2071 677 aa, chain - ## HITS:1 COG:ECs0360 KEGG:ns NR:ns ## COG: ECs0360 COG1292 # Protein_GI_number: 15829614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli O157:H7 # 1 677 1 677 677 1331 99.0 0 MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFGWYYLL AATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQ YMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYP IFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIAL SVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFM GMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFT FTLLWLSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLF YVTSADSGALVLGNFTSQLKDINSDAPSWLRVFWSVAIGLLTLGMLMTNGISALQNTTVI MGLPFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGT RYTKQMMETVCYPAMEEVAQELRLRGAYVELKSLPPEEGQQLGHLDLLVHMGEEQNFVYQ IWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNF IHLHREAPGHSVMFPDA >gi|299857040|gb|ADWS01000024.1| GENE 18 22875 - 23480 566 201 aa, chain + ## HITS:1 COG:ECs0359 KEGG:ns NR:ns ## COG: ECs0359 COG1309 # Protein_GI_number: 15829613 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 7 201 1 195 195 360 99.0 1e-99 MNGVAKMPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKN GLLEATMRDITSQLRDAVLNRLHALPQGSAEQRLQAIVGGNFDETQVSSAAMKAWLAFWA SSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPREQAQEAGYGLAALIDGLWLRAALSGKP LDKPLAHSLTRHFITQHLPTD >gi|299857040|gb|ADWS01000024.1| GENE 19 23494 - 24966 1664 490 aa, chain + ## HITS:1 COG:betB KEGG:ns NR:ns ## COG: betB COG1012 # Protein_GI_number: 16128297 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 490 1 490 490 954 99.0 0 MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIW AAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLI PALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEV TPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMAN SAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKA AFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKG DGFDNGAWVAPTVFTDCRDEMTIVREEIFGPVMSLLTYESEDEVIRRANDTDYGLAAGIV TADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQ VEMAKFQSIF >gi|299857040|gb|ADWS01000024.1| GENE 20 24980 - 26650 1627 556 aa, chain + ## HITS:1 COG:betA KEGG:ns NR:ns ## COG: betA COG2303 # Protein_GI_number: 16128296 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Escherichia coli K12 # 1 556 1 556 556 1167 99.0 0 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY NWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLD CLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQ QEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDGKRAVGVEWLEG DSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHL EMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNI QYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQD WQEFRDAIRITREIMHQPALDQYRGREISPGTECQTDEQLDEFVRNHAETAFHPCGTCKM GYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPRS TAGYFVANGMPVRAKK >gi|299857040|gb|ADWS01000024.1| GENE 21 26863 - 27183 184 106 aa, chain + ## HITS:1 COG:no KEGG:ECO111_0344 NR:ns ## KEGG: ECO111_0344 # Name: ykgH # Def: putative inner membrane protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 106 1 106 221 201 98.0 9e-51 MREQIKQDIDLIEILFYLKKKVRVILFIIAICMAMMLLFLYINKDNIKVSYSLKINQTTP GILVNCDSNNNFACQTAMTEDVIQRITTFFHTSPDVKNSEIKLEWS >gi|299857040|gb|ADWS01000024.1| GENE 22 27503 - 27700 106 65 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0311 NR:ns ## KEGG: EC55989_0311 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 65 1 65 65 122 98.0 5e-27 MNTNKTLGSNTQHSDRECLYKAEVTMTGKGTRFQEWMPVFFTVNILALLMPGYLQKSSIT MTERG >gi|299857040|gb|ADWS01000024.1| GENE 23 27774 - 28469 596 231 aa, chain - ## HITS:1 COG:ykgG KEGG:ns NR:ns ## COG: ykgG COG1556 # Protein_GI_number: 16128293 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 231 52 282 282 438 99.0 1e-123 MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQQRCDAFIQFASDVMLT RCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNAVVWDPAKGAEN ISQAEQAKVGVVYAEYGLTESGGVVLFSAAGRGRSLSLLPESSLFILRKSTILPRVAQLA EKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLIIEDC >gi|299857040|gb|ADWS01000024.1| GENE 24 28462 - 29889 1116 475 aa, chain - ## HITS:1 COG:ykgF KEGG:ns NR:ns ## COG: ykgF COG1139 # Protein_GI_number: 16128292 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Escherichia coli K12 # 1 475 1 475 475 998 99.0 0 MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDELGHWEEWRDRAAQIRD HVLSNLDAYLYQLSEKVTQNGGHVWFAKTKEDATRYILQVAQRKNARKVVKSKSMVTEEI GVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHKDRHQIRRVLHERLGYEGPET PEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAVMG MERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGRSE VLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVISPLLGGYKDFKDLPY ACSLCTACDSVCPVRIPLSKLILRHRRVMAEKGITAKAEQRAIKMFAYANSHPGLWKVGM MAGAHAASWFINGGKTPLKFGAISDWMEARDLPEADGESFRSWFKKHQAQEKKNG >gi|299857040|gb|ADWS01000024.1| GENE 25 29900 - 30619 513 239 aa, chain - ## HITS:1 COG:ECs0344 KEGG:ns NR:ns ## COG: ECs0344 COG0247 # Protein_GI_number: 15829598 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 485 99.0 1e-137 MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQPAINSGYIKEAIPGMK NLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAEKVAARMQDLTSFIVNKLG VVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGLELLTFAEQDTCCGFGGTFSV KMAEISGEMVKEKVVHLMEVRPEYLIGADVSCLLNISGRLQREGQKVKVMHIAEVLMSR >gi|299857040|gb|ADWS01000024.1| GENE 26 31146 - 32000 325 284 aa, chain - ## HITS:1 COG:ECs0343 KEGG:ns NR:ns ## COG: ECs0343 COG2207 # Protein_GI_number: 15829597 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 563 99.0 1e-160 MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFT LRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFLTSLPETLFLAPVNHSVEY NWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLG AVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSR EMLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQLAP >gi|299857040|gb|ADWS01000024.1| GENE 27 32226 - 33551 383 441 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 433 1 444 458 152 26 6e-36 MNKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQ HTDFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHG EKIFINTGAQTVVPPIPGITTTPGVYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANF GSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHVERISHHENQVQVHSEHAQ LAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKQLHTTADNIWAMGDVTGGLQFT YISLDDYRIVRDELLGEGRRSTDDRKNVPYSVFMTPPLSRVGMTEEQARESGADIQVVTL PVAAIPRARVMNDTRGVLKAIVDNKTQRILGASLLCVDSHEMINIVKMVMDAGLPYSILR DQIFTHPSMSESLNDLFSLVK >gi|299857040|gb|ADWS01000024.1| GENE 28 33648 - 33896 93 82 aa, chain + ## HITS:1 COG:no KEGG:G2583_0402 NR:ns ## KEGG: G2583_0402 # Name: ykgI # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 82 2 83 83 122 98.0 3e-27 MVFYMFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLEDAIADIARKYNA SSWKVTSMRIDNNSTATAVLYK >gi|299857040|gb|ADWS01000024.1| GENE 29 33908 - 34501 536 197 aa, chain + ## HITS:1 COG:ykgB KEGG:ns NR:ns ## COG: ykgB COG3059 # Protein_GI_number: 16128286 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 197 4 200 200 385 98.0 1e-107 MEKYLHMLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSITPFVANSPLMSFFYEHP EDYKQYLTHEGEYKPEARAWQSANNTYGFSNGLGVVEVIIALLVLANPVNRWLGLLGGLM AFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLVLKDTLMLAGAVMIMADSARE ILKQRSNESSSTLKTEY >gi|299857040|gb|ADWS01000024.1| GENE 30 34665 - 35531 678 288 aa, chain - ## HITS:1 COG:ECs0338 KEGG:ns NR:ns ## COG: ECs0338 COG0656 # Protein_GI_number: 15829592 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli O157:H7 # 1 286 1 286 289 594 99.0 1e-170 MEFSVLSNNLKMPMMGFGVFQVTDKNVCKQSVLNAIRTGYRLIDTAAVYGNEDAVGEAVR EAISEGLCTRDELFITSKLWVQDMLNQDTAAAGIEASLKKSGLEYFDLYLLHQAMRDYFS AWRALEDAYEEGKLKAIGVSNFYPHVLANFCETVRVKPMVNQVELHPYFAQPEALATMKY YNVQPEAWAPLGGGRHKPFENNLLQSIADAHQKSISQVILRWNIQRGVVVIPKSTHQQRI EENFAIWDFSLTEKEMAQISSLDLGYVGESVKHFNPEFVRGCLAVKNS >gi|299857040|gb|ADWS01000024.1| GENE 31 35780 - 36637 423 285 aa, chain + ## HITS:1 COG:ECs0337 KEGG:ns NR:ns ## COG: ECs0337 COG2207 # Protein_GI_number: 15829591 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 285 12 296 296 569 97.0 1e-162 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLI RQQQKTECRLVNFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMNNFKTDIYFVS TFEPSTKSVDLLTVETFAGTVCKQTDSEMPKEWTINRGLYASFRYEGEWEHYPEWARNLY LMELPARGLARVNGSDIERFYYNENFVEIDSNNIVCEIFIPVRPV >gi|299857040|gb|ADWS01000024.1| GENE 32 36758 - 41011 2950 1417 aa, chain - ## HITS:1 COG:no KEGG:ECSE_0316 NR:ns ## KEGG: ECSE_0316 # Name: not_defined # Def: putative invasin # Organism: E.coli_SE11 # Pathway: not_defined # 1 1417 1 1417 1417 2484 99.0 0 MSRYKTGHKQPRFRYSVLARCVAWANISVQVLFPLAVTFTPVMAARAQHAVQPRLSMGNT TVTADNNVEKNVASFAANAGTFLSSQPDSDATRNFITGMATAKANQEIQEWLGKYGTARV KLNVDKDFSLKDSSLEMLYPIYDTPTNMLFTQGAIHRTDDRTQSNIGFGWRHFSGNDWMA GVNTFIDHDLSRSHTRIGVGAEYWRDYLKLSANGYIRASGWKKSPDIEDYQERPANGWDI RAEGYLPAWPQLGASLMYEQYYGDEVGLFGKDKRQKDPHAISAEVTYTPVPLLTLSAGHK QGKSGENDTRFGLEVNYRIGEPLEKQLDTDSIRERRMLAGSRYDLVERNNNIVLEYRKSE VIRIALPERIEGKGGQTLSLGLVVSKATHGLKNVQWEAPSLLAEGGKITGQGSQWQVTLP AYRPGKDNYYAISAVAYDNKGNASKRVQTEVVITGAGMSADRTALTLDGQSRIQMLANGN EQRPLVLSLRDAEGQPVTGMKDQIKTELTFKPAGNIVTRTLKATKSQAKPTLGEFTETEA GVYQSVFTTGTQSGEATITVSVDGMSKTVTAELRATMMDVANSTLSANEPSGDVVADGQQ AYTLTLTAVDTDGNPVTGEASRLRFVPQDTNGVTIGTISEIKPGVYSATVSSTRAGNVVV RAFSEQYQLGTLQQTLKFVAGPLDAAHSSITLNPDKPVVGGTVTAIWTVKDAYDNPVTSL TPEAPSLAGAAAVGSTASGWTNNGDGTWTAQITLGSTAGELEVMPKLNGQDAAANAAKVT VVADALSSNQSKVSVAEDHVKAGESTTVTLIAKDAHGNAISGLSLSASLTGTASEGATVS SWTEKGDGSYVATLTTGGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNK APTVKTTTELTFTVKDAYGNPVTGMKPDAPVFSGAASTGTERPSTGDWTETSNGVYVATL TLGSAAGQLSVMPRVNGQNAVAQPLVLNVAGDASKAEIRDMTVKVDNQLANGQSTNQVTL TVVDTYGNPLQGQNVTLTLPKGVTSKTGNTVTTDAAGKADIELMSTVAGEHSITASVNNA QKTVTVKFKADFSTGQASLEVDSAAPKVANGKDAFTLTATVEDKNGNPVPGSLVTFNLPR GVKPLTGDNVWVKANGEGKAELQVVSVTAGTYEITASAGNSQPSDTQTITFVADKATATV SGIEVMGNYALADGKAKQTYKVTVTDANNNLVKDSEVTLTASPASLNLEPNGTATTNEQG QAIFTATTTVAATYTLKAQVSQTNGQVSTKTAESKFVADDKNAVLTASSDMQSLVADGKS TAKLEVTLMSANNPVGGNMWVDIQTPEGVTEKDYQFLPSKNDHFVSGKITRKFSTSKPGV YTFTFNALTYGGYEMKPVTVTITAVDADTAKDEEAMK >gi|299857040|gb|ADWS01000024.1| GENE 33 42127 - 42228 105 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKENKVQQISHKLINIVVFVAIVEYAYLFLHFY >gi|299857040|gb|ADWS01000024.1| GENE 34 42588 - 42854 457 88 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|191165768|ref|ZP_03027607.1| 50S ribosomal protein L31 type B [Escherichia coli B7A] # 1 88 1 88 88 180 98 2e-44 MMKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTG KLRTVASEGNVARFTQRFGRFVSTKKGS >gi|299857040|gb|ADWS01000024.1| GENE 35 42851 - 42994 241 47 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|26246304|ref|NP_752343.1| 50S ribosomal protein L36 [Escherichia coli CFT073] # 1 47 1 47 47 97 97 2e-19 MMKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKKR >gi|299857040|gb|ADWS01000024.1| GENE 36 44079 - 44621 222 180 aa, chain + ## HITS:1 COG:ECs0324 KEGG:ns NR:ns ## COG: ECs0324 COG2771 # Protein_GI_number: 15829578 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 180 17 196 196 331 98.0 6e-91 MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLNTDSLSEFIN RDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFL RKDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ >gi|299857040|gb|ADWS01000024.1| GENE 37 44696 - 45283 602 195 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_0294 NR:ns ## KEGG: ECIAI1_0294 # Name: ecpA # Def: common pilus ECP # Organism: E.coli_IAI1 # Pathway: not_defined # 1 195 1 195 195 289 100.0 4e-77 MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEG IKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTG DTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFTIISGTTNGTTAVTDYSTLPEGI WSGDVSVQFDATWTS >gi|299857040|gb|ADWS01000024.1| GENE 38 45341 - 46009 450 222 aa, chain + ## HITS:1 COG:no KEGG:JW0286 NR:ns ## KEGG: JW0286 # Name: yagY # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 222 1 222 222 417 99.0 1e-115 MKKHLLPLALLFSGIPPAQALDVGDISSFMNSDSSTLSKTIKNSTDSGRLINIRLERLSS PLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDA QRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLTNTGNATLRILAYGPCLKAAN GKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK >gi|299857040|gb|ADWS01000024.1| GENE 39 46035 - 48560 1907 841 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0268 NR:ns ## KEGG: ECO103_0268 # Name: ecpC # Def: putative outer membrane usher protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 841 1 841 841 1548 99.0 0 MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYI HLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASVSEQTRQQLMALANAPFNE ALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSEDIGQSSVNTLSSNLSYNLGVY NNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRF AGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLT RDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEVIVNGRVISKRPQRVNKLFSRGRGVGA PLAWQVWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSLSTLSWAATGYGYDNQAVGET RLTLPLGGAINVNLQNMLASDSSWSSIGSISATLPGGFSSLWVNQEKTRIGNQLRRSDAD NRAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQNVYSGTFGSLGLRAGIQRY NNGDSNANTGKYIALDLSLPLGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSR AISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYINTNLTANGSVGWQGKNIAASG RTDGNAGVIFNTGLEDDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSY DIVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENG EFVMDVDKKYPTIDFRYSGNKTCEVALELNQARGAVWVGDVVCSGLSSWAAVTQTGEENE S >gi|299857040|gb|ADWS01000024.1| GENE 40 48574 - 50193 943 539 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_0291 NR:ns ## KEGG: ECIAI1_0291 # Name: yagW # Def: putative surface or exported protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 539 9 547 547 1042 100.0 0 MIIFALIWPVTELRAAVSKTTWADAPAREFVFVENNSDDNFFVTPGGALDPRLTGANRWT GLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDMWLENSPVSSPLTGLRCINWYAGCNMT TSLILPQTTDASGFYGATVTSGGAKWMHGMLSDAFYQYLQQMPVGSSFTMTINACQTSVN YDASSGARCKDQATGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLGEGNADCRT QTIGSLSGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSLNGSSWKPV SNTAYYYTFNEMKSADSIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTTSPESGWYE FSTSNTLIIKPRDFSISIISDEYTQTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIK VTGPAQVIGGRSYCVFSSDDGKAKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWL TTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN >gi|299857040|gb|ADWS01000024.1| GENE 41 50162 - 50872 365 236 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0307 NR:ns ## KEGG: ECSE_0307 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 236 16 251 251 472 99.0 1e-132 MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRI AISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFRE VPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWSFDKVTGTVSNTGNTWFKLLI KPGCDSTEEEGDAWYLRPGDVVRQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD >gi|299857040|gb|ADWS01000024.1| GENE 42 51762 - 52133 234 123 aa, chain - ## HITS:1 COG:ECs0317 KEGG:ns NR:ns ## COG: ECs0317 COG3477 # Protein_GI_number: 15829571 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Escherichia coli O157:H7 # 1 123 82 204 204 246 99.0 8e-66 MGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQL FVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLG SNR >gi|299857040|gb|ADWS01000024.1| GENE 43 52791 - 53480 454 229 aa, chain + ## HITS:1 COG:ECs0316 KEGG:ns NR:ns ## COG: ECs0316 COG2080 # Protein_GI_number: 15829570 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 431 98.0 1e-121 MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPHSTLAASVPAATPAPEI MPLTLKVNGKTEQLEVDTRTTLLDALRENLHLIGTKKGCDHGQCGACTVLVNGRRLNACL TLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGYCTSGQICSSVAALKEIQDGI PSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILAAIEDAAGEIKS >gi|299857040|gb|ADWS01000024.1| GENE 44 53477 - 54433 585 318 aa, chain + ## HITS:1 COG:yagS KEGG:ns NR:ns ## COG: yagS COG1319 # Protein_GI_number: 16128270 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli K12 # 1 318 1 318 318 597 99.0 1e-171 MKAFTYERVNTPAEAALSAQRVPCAKFIAGGTNLLDLMKLEIETPTHLIDVNGLGLDKIE VTDAGGLRIGALVRNTDLAAHERVRRDYAVLSRALLAGASGQLRNQATTAGNLLQRTRCP YFYDTNQPCNKRLPGSGCAALEGFSRQHAVVGVSEACIATHPSDMAVAMRLLDAVVETIT PEGKTRSITLADFYHPPGKTPHIETALLPGELIVAVTLPPPLGGKHIYRKVRDRASYAFA LVSVAAIIQPDGSGRVALGGVAHKPWRIEAADAQLSQGAQAVYDTLFASAHPTAENTFKL LLAKRTLASVLAEARAQA >gi|299857040|gb|ADWS01000024.1| GENE 45 54430 - 56628 1646 732 aa, chain + ## HITS:1 COG:yagR KEGG:ns NR:ns ## COG: yagR COG1529 # Protein_GI_number: 16128269 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli K12 # 1 732 1 732 732 1404 100.0 0 MKFDKPAGENPIDQLKVVGRPHDRIDGPLKTTGTARYAYEWHEEAPNAAYGYIVGSAIAK GRLTALDTDAAQKAPGVLAVITASNAGALGKGDKNTARLLGGPTIEHYHQAIALVVAETF EQARAAASLVQAHYRRNKGAYSLADEKQAVNQPPEDTPDKNVGDFDGAFTSAAVKIDATY TTPDQSHMAMEPHASMAVWDGNKLTLWTSNQMIDWCRTDLAKTLKVPVENVRIISPYIGG GFGGKLFLRSDALLAALAARAVKRPVKVMLPRPSIPNNTTHRPATLQHLRIGADQSGKIT AISHESWSGNLPGGTPETAVQQSELLYAGANRHTGLRLATLDLPEGNAMRAPGEAPGLMA LEIAIDELAEKAGIDPVEFRILNDTQVDPADPTRCFSRRQLIECLRTGADKFGWKQRNAT PGQVRDGEWLVGHGVAAGFRNNLLEKSGARVHLEQNGTVTVETDMTDIGTGSYTILAQTA AEMLGVPLEQVAVHLGDSSFPVSAGSGGQWGANTSTSGVYAACMKLREMIASAVGFDPEQ SQFADGKITNGTRSATLHEATAGGRLTAEESIEFGTLSKEYQQSTFAGHFVEVGVHSATG EVRVRRMLAVCAAGRILNPKTARSQVIGAMTMGMGAALMEELAVDDRLGYFVNHDMAGYE VPVHADIPKQEVIFLDDTDPISSPMKAKGVGELGLCGVSAAIANAVYNATGIRVRDYPIT LDKLLDKLPDVV >gi|299857040|gb|ADWS01000024.1| GENE 46 56638 - 57594 549 318 aa, chain + ## HITS:1 COG:yagQ KEGG:ns NR:ns ## COG: yagQ COG1975 # Protein_GI_number: 16128268 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Escherichia coli K12 # 1 318 1 318 318 611 99.0 1e-175 MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQ MVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGEGSPWFDIVLPCGGGITLT LHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVRL MIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAA REAKPFYLGALGSYRTHTLRLQKLHELGWSREETTQIRAPVGIFPKARDAHTLALSVLAE VASVRLHQEEDSCLPPSS >gi|299857040|gb|ADWS01000024.1| GENE 47 57573 - 57983 309 136 aa, chain + ## HITS:1 COG:yagP KEGG:ns NR:ns ## COG: yagP COG0583 # Protein_GI_number: 16128267 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 135 1 135 136 250 99.0 5e-67 MPAPVVLILAAGRGERFLASGGNTHKCIGWRQSPEVAPYRWPFEENGRTFDLAIEPQITT NDLRLMLRLALAGGGITIATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPK LRALIDYVKEWRQQLV >gi|299857040|gb|ADWS01000024.1| GENE 48 58513 - 59025 -134 170 aa, chain - ## HITS:1 COG:no KEGG:DP2255 NR:ns ## KEGG: DP2255 # Name: not_defined # Def: hypothetical protein # Organism: D.psychrophila # Pathway: not_defined # 1 165 207 374 384 213 57.0 2e-54 MLGAGGFNVKLLKIHGSLNWLQCSRCMRLYVGFNKKIGVARGATCRHCDKNHDAVNKENR LISNLIMPTFLKDLSNPQYKIIWQNAGIELSEADKIIFIGYSLPNADFEMRQLLSRMIKR SVKIEVVTYERDKEKEKDIKKYWQAFFGEREVKVHLCGASQFIEQSLYLE >gi|299857040|gb|ADWS01000024.1| GENE 49 59704 - 62037 1144 777 aa, chain - ## HITS:1 COG:Z0339_2 KEGG:ns NR:ns ## COG: Z0339_2 COG3378 # Protein_GI_number: 15799978 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 EDL933 # 370 771 1 402 408 788 94.0 0 MSGMKVSQAVKAARGHWAQILPALGVNILKNRHQPCPVCGGKDRFRFDDQEGRGTWFCNQ CGAGDGLALVTRALNVDISEAADRIHGLTHGLFIANSEVRTLTADTDSGKDAAAALAARL LQASRESAGNTYLTHKGFPEHVCHELTSAHKTGGVMFRPGDLIVPLYNADGELVNIQLIS GNGSKCFLKGGQVKEAYHLIEGGGSSVRRVWIAEGYATALTIHHLTGEAVMVAFSSVNFL SLASVAHNKYPGYQLIIAADRDLNGSGQNRAEAAAKACQCDIVLPPVFGDWNDALAHYGE ESTRKAILEALKPHNASPFDTMSEAEFTAMSVSEKAQRVREHYRDALAVDPNGQLLSRYE SGAWKVISQSDFARDVAALFQRLGAPFSSGKIASLVETLKLIVPQQQNPARHLIGFRNGV LDTRTGLFSPHCKENWLRTVCEVDFTPPVKGETLETHAPAFWRWLDRAAGHKPAKRDIIL AALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAAL IGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYQNAYSTHIPAVILAVNNNPMRFTD RSGGVSRRRVILHFPEQIAPEERDPQLKDKIARELAVIVRQLMQRFSDPMSARTLLQSQQ NSDEALTIKRDADPAFDFCGYLEALPDTNGMFMGNANIVPRQPRTYLYHAYLVYMEANGY KNTLSLTMFGKGLPLMLKEYGLQYEKRRTNQGMQTNLALREECNADWLPKCSLEITK >gi|299857040|gb|ADWS01000024.1| GENE 50 62052 - 62375 187 107 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_A4846 NR:ns ## KEGG: SNSL254_A4846 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 1 107 1 107 107 196 100.0 2e-49 MKSRTLSLSLRVALYRRAVACAWLSACYQQNRHLQLTLDEIETAIARELEGFYLRQHGQT KGMEIACALLSDLMESGPLMSCPALSQLGIAVMDELCVRHIKKPVLH >gi|299857040|gb|ADWS01000024.1| GENE 51 62372 - 62596 256 74 aa, chain - ## HITS:1 COG:no KEGG:ECO26_5446 NR:ns ## KEGG: ECO26_5446 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 74 1 74 74 133 98.0 2e-30 MNHAAISYDDIVRLKHLRNVGEFVTGMAVLQDCYEKPASAQCEQLVSLIYLMTEQLDGVV QRCQDDLMNMEVVQ >gi|299857040|gb|ADWS01000024.1| GENE 52 62596 - 62787 217 63 aa, chain - ## HITS:1 COG:no KEGG:ECO26_5445 NR:ns ## KEGG: ECO26_5445 # Name: not_defined # Def: putative repressor protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 63 120 182 182 105 92.0 4e-22 MATILTPSHPQFIFVFAAVRRAERKPRISMLRIVASDESHARLSLVHEYVLCLAARLPVR EVM >gi|299857040|gb|ADWS01000024.1| GENE 53 63141 - 63401 256 86 aa, chain - ## HITS:1 COG:ECs0299 KEGG:ns NR:ns ## COG: ECs0299 COG3311 # Protein_GI_number: 15829553 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 86 1 86 86 122 75.0 2e-28 MHTISVSTQAPAAPVLPVPTQQERFIRLPEVMHLCGLSRSTIYDLISRDAFPQQISLGGK NVAWVQSEVSAWMAARIAAREQGVHA >gi|299857040|gb|ADWS01000024.1| GENE 54 64305 - 65057 545 250 aa, chain + ## HITS:1 COG:no KEGG:ECO26_5443 NR:ns ## KEGG: ECO26_5443 # Name: not_defined # Def: putative head size determination protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 250 1 250 250 444 97.0 1e-123 MTTVNQIPDVNITPSLPPKIREAVEKVKAAKAVWQEERRKQTEAAAMTETIRKRQEDTKT ETQALNDEWRNLFRENQGNMTPRMKKLRAEIALGRETLDEFEDLLAAQAAENEFLPWKTA DAANRYISEHNRLIETHAVWLWNEFMKEHGQKLIQILGLLKMTLGRSASSVIGVVHTVND PESVLKQFISEQLTTPALSCNVSSTDDIALPGISIYADDKAIQDARQSPSPAARSRMLKQ RDMVKGGEKE >gi|299857040|gb|ADWS01000024.1| GENE 55 65054 - 65608 253 184 aa, chain + ## HITS:1 COG:no KEGG:ECO26_5442 NR:ns ## KEGG: ECO26_5442 # Name: not_defined # Def: putative polarity suppression protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 184 1 184 184 323 95.0 3e-87 MNTGTITKEALNDYRAAIKSWLTLRNVQSTSQLRLAALLDTEEKPAAYASQLEDLREHLV LLEWQINCAARDGLYAHQIVLESCVTSATENFMSEHGDALTDALAPFLCAPYGLEAAMKI LRTAVARQTEVRTPVISAAYKSIIDETGLTVDASMRADASASFTPAQHKVFLARLNRLNE KGVC >gi|299857040|gb|ADWS01000024.1| GENE 56 65610 - 65882 187 90 aa, chain + ## HITS:1 COG:no KEGG:ECO26_5441 NR:ns ## KEGG: ECO26_5441 # Name: not_defined # Def: putative transcription activator # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 90 1 90 90 143 95.0 2e-33 MALKCPECGAVAHARTSAYEAPSVKRSWYQCQSLECSCTFTALESVDTIIMKPRRNEQAS DKAKMPEKQQQTLNRYGSASKLSNRQQIPV Prediction of potential genes in microbial genomes Time: Sun May 15 22:30:36 2011 Seq name: gi|299857039|gb|ADWS01000025.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont24.1, whole genome shotgun sequence Length of sequence - 62729 bp Number of predicted genes - 60, with homology - 57 Number of transcription units - 34, operones - 13 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 66 - 869 411 ## ECSE_1455 putative phage tail fiber protein 2 1 Op 2 . + CDS 869 - 1450 348 ## COG5525 Bacteriophage tail assembly protein + Term 1474 - 1510 -0.8 3 2 Tu 1 . - CDS 2270 - 2467 155 ## - Prom 2550 - 2609 5.0 4 3 Op 1 3/0.600 + CDS 3184 - 4467 1341 ## COG0477 Permeases of the major facilitator superfamily + Term 4476 - 4511 4.2 + Prom 4477 - 4536 2.4 5 3 Op 2 . + CDS 4556 - 6016 1245 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Term 6009 - 6044 5.2 6 4 Tu 1 . - CDS 6051 - 6254 378 ## ECIAI1_1560 putative selenium carrying protein - Prom 6296 - 6355 1.5 - Term 6388 - 6423 6.7 7 5 Tu 1 5/0.300 - CDS 6432 - 7118 674 ## COG1802 Transcriptional regulators - Prom 7144 - 7203 5.5 - Term 7166 - 7202 3.0 8 6 Op 1 . - CDS 7207 - 7953 877 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity 9 6 Op 2 . - CDS 7965 - 8183 58 ## - Prom 8243 - 8302 2.7 10 7 Tu 1 . + CDS 8090 - 10135 1772 ## COG0339 Zn-dependent oligopeptidases - Term 10126 - 10179 2.2 11 8 Tu 1 . - CDS 10180 - 10446 121 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + Prom 10849 - 10908 9.1 12 9 Tu 1 . + CDS 10969 - 11361 318 ## COG3111 Uncharacterized conserved protein + Term 11373 - 11414 6.2 + Prom 11529 - 11588 6.9 13 10 Tu 1 . + CDS 11616 - 12506 374 ## COG2199 FOG: GGDEF domain + Term 12624 - 12654 2.1 - Term 12654 - 12697 10.4 14 11 Tu 1 . - CDS 12725 - 12820 88 ## - Prom 12880 - 12939 4.6 15 12 Tu 1 . - CDS 12947 - 14134 910 ## COG0477 Permeases of the major facilitator superfamily - Prom 14200 - 14259 3.7 + Prom 14113 - 14172 4.7 16 13 Tu 1 . + CDS 14329 - 15228 806 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 15231 - 15281 4.3 - Term 15219 - 15269 7.3 17 14 Tu 1 . - CDS 15273 - 15686 252 ## COG2188 Transcriptional regulators - Prom 15860 - 15919 3.7 18 15 Op 1 10/0.000 + CDS 16229 - 16480 319 ## COG1440 Phosphotransferase system cellobiose-specific component IIB + Prom 16482 - 16541 3.8 19 15 Op 2 . + CDS 16595 - 17212 249 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 20 15 Op 3 13/0.000 + CDS 17190 - 17918 528 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 21 15 Op 4 . + CDS 17946 - 18257 337 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Term 18261 - 18300 6.0 22 16 Op 1 1/0.900 + CDS 18313 - 19986 1276 ## COG4580 Maltoporin (phage lambda and maltose receptor) 23 16 Op 2 . + CDS 20011 - 21450 1007 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Term 21454 - 21505 -0.8 24 17 Op 1 . - CDS 21507 - 21725 136 ## SbBS512_E1673 hypothetical protein 25 17 Op 2 3/0.600 - CDS 21757 - 22140 287 ## COG2207 AraC-type DNA-binding domain-containing proteins 26 17 Op 3 . - CDS 22160 - 22594 393 ## COG1846 Transcriptional regulators - Prom 22622 - 22681 7.1 + Prom 22714 - 22773 5.4 27 18 Tu 1 . + CDS 22806 - 23471 638 ## COG2095 Multiple antibiotic transporter + Term 23476 - 23501 -0.5 - Term 23460 - 23493 3.8 28 19 Tu 1 . - CDS 23496 - 24686 867 ## COG2814 Arabinose efflux permease - Prom 24719 - 24778 6.6 29 20 Tu 1 . - CDS 24836 - 25543 312 ## B21_01495 hypothetical protein - Prom 25699 - 25758 4.8 30 21 Tu 1 . - CDS 26029 - 26910 666 ## COG0583 Transcriptional regulator - Prom 26943 - 27002 3.8 + Prom 26928 - 26987 2.4 31 22 Op 1 3/0.600 + CDS 27011 - 28399 1352 ## COG1012 NAD-dependent aldehyde dehydrogenases 32 22 Op 2 . + CDS 28475 - 29389 587 ## COG2066 Glutaminase 33 22 Op 3 . + CDS 29389 - 29748 257 ## B21_01491 hypothetical protein + Prom 29771 - 29830 3.5 34 23 Tu 1 . + CDS 29887 - 31305 1279 ## COG2199 FOG: GGDEF domain + Prom 31307 - 31366 3.4 35 24 Tu 1 . + CDS 31532 - 32983 1693 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases + Term 33000 - 33033 3.8 + Prom 33014 - 33073 3.9 36 25 Tu 1 . + CDS 33191 - 34105 617 ## COG3781 Predicted membrane protein 37 26 Op 1 3/0.600 - CDS 34109 - 34867 585 ## COG4106 Trans-aconitate methyltransferase 38 26 Op 2 5/0.300 - CDS 34924 - 35214 379 ## COG1359 Uncharacterized conserved protein 39 26 Op 3 6/0.300 - CDS 35238 - 36113 840 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 40 26 Op 4 16/0.000 - CDS 36140 - 37162 1096 ## COG1879 ABC-type sugar transport system, periplasmic component 41 26 Op 5 11/0.000 - CDS 37174 - 38166 1032 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 42 26 Op 6 21/0.000 - CDS 38166 - 39194 972 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 43 26 Op 7 . - CDS 39188 - 40723 183 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 40927 - 40986 4.8 + Prom 40789 - 40848 5.9 44 27 Op 1 5/0.300 + CDS 40972 - 41925 839 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 45 27 Op 2 1/0.900 + CDS 42004 - 43143 882 ## COG1070 Sugar (pentulose and hexulose) kinases 46 27 Op 3 . + CDS 43145 - 43597 220 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 43603 - 43648 -0.9 + Prom 43897 - 43956 6.8 47 28 Op 1 . + CDS 44128 - 45585 820 ## COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain 48 28 Op 2 1/0.900 + CDS 45447 - 49547 2968 ## COG3468 Type V secretory pathway, adhesin AidA + Term 49557 - 49593 7.1 + Prom 49658 - 49717 5.4 49 29 Op 1 8/0.200 + CDS 49756 - 50022 266 ## COG1396 Predicted transcriptional regulators 50 29 Op 2 1/0.900 + CDS 50022 - 50216 145 ## COG3550 Uncharacterized protein related to capsule biosynthesis enzymes + Prom 50282 - 50341 3.1 51 30 Tu 1 2/0.700 + CDS 50364 - 51344 350 ## COG3550 Uncharacterized protein related to capsule biosynthesis enzymes + Prom 52017 - 52076 5.6 52 31 Tu 1 . + CDS 52294 - 52857 331 ## COG3539 P pilus assembly protein, pilin FimA + Term 52899 - 52945 -0.4 + Prom 53001 - 53060 4.0 53 32 Op 1 10/0.000 + CDS 53218 - 53928 406 ## COG3121 P pilus assembly protein, chaperone PapD 54 32 Op 2 6/0.300 + CDS 53970 - 56621 1191 ## COG3188 P pilus assembly protein, porin PapC 55 32 Op 3 4/0.500 + CDS 56635 - 57165 358 ## COG3539 P pilus assembly protein, pilin FimA 56 32 Op 4 . + CDS 57178 - 57681 217 ## COG3539 P pilus assembly protein, pilin FimA 57 32 Op 5 . + CDS 57740 - 58654 266 ## ECO103_1629 putative fimbrial-like adhesin protein + Term 58686 - 58733 0.2 + Prom 58733 - 58792 9.9 58 33 Tu 1 . + CDS 58988 - 61267 1255 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 61281 - 61324 8.2 + Prom 61409 - 61468 5.0 59 34 Op 1 . + CDS 61515 - 61712 142 ## SSON_1623 hypothetical protein 60 34 Op 2 . + CDS 61787 - 62548 338 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 62596 - 62632 3.0 Predicted protein(s) >gi|299857039|gb|ADWS01000025.1| GENE 1 66 - 869 411 267 aa, chain + ## HITS:1 COG:no KEGG:ECSE_1455 NR:ns ## KEGG: ECSE_1455 # Name: not_defined # Def: putative phage tail fiber protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 267 866 1132 1132 459 99.0 1e-128 MKAHYRNGGLFYRSSRDGYGFEEGWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQ GQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTD LGTKTTSSFDYGTKSTNNTGAHTHSLSGSTNAAGNHSHRDGRRFNPSVFKDTYQYGYTSS GQNTWGVQGSVGMSTGWLANTSTDGNHSHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHG HTITVNAAGNAENTVKNIAFNYIVRLA >gi|299857039|gb|ADWS01000025.1| GENE 2 869 - 1450 348 193 aa, chain + ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 50 192 103 245 247 269 93.0 2e-72 MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNS DESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEA EKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVNTT TAPDIEWPVAPIG >gi|299857039|gb|ADWS01000025.1| GENE 3 2270 - 2467 155 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDGESFNFDDNDIEFIASMYASCKLSGSIAPIMHIMVSIPKNKKKQFYERVEHYCSLYSN KNPPS >gi|299857039|gb|ADWS01000025.1| GENE 4 3184 - 4467 1341 427 aa, chain + ## HITS:1 COG:ydfJ KEGG:ns NR:ns ## COG: ydfJ COG0477 # Protein_GI_number: 16129502 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 427 1 427 427 788 100.0 0 MDFQLYSLGAALVFHEIFFPESSTAMALILAMGTYGAGYVARIVGAFIFGKMGDRIGRKK VLFITITMMGICTTLIGVLPTYAQIGVFAPILLVTLRIIQGLGAGAEISGAGTMLAEYAP KGKRGIISSFVAMGTNCGTLSATAIWAFMFFILSKEELLAWGWRIPFLASVVVMVFAIWL RMNLKESPVFEKVNDSNQPTAKPAPAGSMFQSKSFWLATGLRFGQAGNSGLIQTFLAGYL VQTLLFNKAIPTDALMISSILGFMTIPFLGWLSDKIGRRIPYIIMNTSAIVLAWPMLSII VDKSYAPSTIMVALIVIHNCAVLGLFALENITMAEMFGCKNRFTRMAISKEIGGLIASGF GPILAGIFCTMTESWYPIAIMIMAYSVIGLISALKMPEVKDRDLSALEDAAEDQPRVVRA AQPSRSL >gi|299857039|gb|ADWS01000025.1| GENE 5 4556 - 6016 1245 486 aa, chain + ## HITS:1 COG:ydfI KEGG:ns NR:ns ## COG: ydfI COG0246 # Protein_GI_number: 16129501 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli K12 # 1 486 1 486 486 974 98.0 0 MGNNLLSAKATLPVYDRNNLAPRIIHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLI GGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQMDGLETVLAAMCEPQIAIV SLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATGVIVEALARRKAAGLPAFTVM SCDNMPENGHVMRDVVTSYAKAVDVKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQL TGVGDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLA YLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKVQGVDLQDYANRLIERYSNPALR HRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVAGWMRYVGGVDEQGNPIEISD PLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTAKVTEAYLSLLAHGAKATV AKYSVK >gi|299857039|gb|ADWS01000025.1| GENE 6 6051 - 6254 378 67 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_1560 NR:ns ## KEGG: ECIAI1_1560 # Name: ydfZ # Def: putative selenium carrying protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 67 1 67 67 114 100.0 1e-24 MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLD LIRLGMN >gi|299857039|gb|ADWS01000025.1| GENE 7 6432 - 7118 674 228 aa, chain - ## HITS:1 COG:ECs2149 KEGG:ns NR:ns ## COG: ECs2149 COG1802 # Protein_GI_number: 15831403 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 414 100.0 1e-116 MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLA ENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQ RIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEML LRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE >gi|299857039|gb|ADWS01000025.1| GENE 8 7207 - 7953 877 248 aa, chain - ## HITS:1 COG:ydfG KEGG:ns NR:ns ## COG: ydfG COG4221 # Protein_GI_number: 16129498 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Escherichia coli K12 # 1 248 1 248 248 504 100.0 1e-143 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAA IEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPG MVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV GGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSY AGLNVHRQ >gi|299857039|gb|ADWS01000025.1| GENE 9 7965 - 8183 58 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPGDSDDWQFDQNEEPDTAVCFAQGKDSLLSFSSPEREVFHSVGLLITECNLANQYYPLL SITCYVIDTQKR >gi|299857039|gb|ADWS01000025.1| GENE 10 8090 - 10135 1772 681 aa, chain + ## HITS:1 COG:ECs2147 KEGG:ns NR:ns ## COG: ECs2147 COG0339 # Protein_GI_number: 15831401 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Escherichia coli O157:H7 # 1 681 1 681 681 1321 99.0 0 MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIAAIALNPQTPDFNNTIL ALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAELANDIYLNGELFARVDAVW QRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFNQRLLAAN KSGGLVVNDIAQLAGMSEQEIALAAVAAREKGLDNKWLIPLLNTTQQPALAEMRDRATRE KLFIAGWTRAEKNDGNDTRAIIQRLVEIRAQQAKLLGFPHYAAWKIADQMAKTPEAALNF MREIVPAARQRASDELASIQAVIDKQQGGFSAQPWDWAFYAEQVRREKFDLDEAQLKPYF ELNTVLNEGVFWTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDS KSGGAWMGNFVEQSTLNETHPVIYNVCNYQKPAAGEPALLLWDDVITLFHEFGHTLHGLF ARQRYATLSGTNTPRDFVEFPSQINEHWATHPQVFARYARHYQSGAAMPDELQQKMRNAS LFNKGYEMSELLSAALLDMRWHCLEENEAMQDVDDFELRALVAENMDLPAIPPRYRSSYF AHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQGGLTRENGQRFREAILSRGNSEDLERLY RQWRGKAPQIMPMLQHRGLNI >gi|299857039|gb|ADWS01000025.1| GENE 11 10180 - 10446 121 88 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 8 88 823 902 904 51 38 1e-13 MNDILRWKVAAEMATGAIERADADVSIAITGYGGPEGGEDGTPAGTVWFAWHIKGQTYTA VMHFAGDCETVLALAVRFALVQLLQLLL >gi|299857039|gb|ADWS01000025.1| GENE 12 10969 - 11361 318 130 aa, chain + ## HITS:1 COG:ydeI KEGG:ns NR:ns ## COG: ydeI COG3111 # Protein_GI_number: 16129495 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 130 1 130 130 244 99.0 3e-65 MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKNMHD GASVSLRGNLISHKGEDRYVFRDKSGEINVVIPAAVFDGREVQPDQMINISGSLDKKSAP AVVRVTHLQK >gi|299857039|gb|ADWS01000025.1| GENE 13 11616 - 12506 374 296 aa, chain + ## HITS:1 COG:ydeH_2 KEGG:ns NR:ns ## COG: ydeH_2 COG2199 # Protein_GI_number: 16129494 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 121 296 1 176 176 361 99.0 1e-99 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNTEPLNLYLMLLDIDRFKLVNDTYGHLI GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV >gi|299857039|gb|ADWS01000025.1| GENE 14 12725 - 12820 88 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLGNMNVFMAVLGIILFSGFLAAYFSHKWDD >gi|299857039|gb|ADWS01000025.1| GENE 15 12947 - 14134 910 395 aa, chain - ## HITS:1 COG:ydeF KEGG:ns NR:ns ## COG: ydeF COG0477 # Protein_GI_number: 16129493 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 395 1 395 395 659 99.0 0 MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFS LGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFATVLKAW FADNLSSTSKTKIFSINYTMLNIGWTIGPPLGTLLVMQSINLPFWLAAICSAFPMLFIQI WVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGD FAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLVGFIFSGNSLLL WGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGVVLTSL PPSSLFVILALVIIAAWVLMLKGIRARPWGQPALC >gi|299857039|gb|ADWS01000025.1| GENE 16 14329 - 15228 806 299 aa, chain + ## HITS:1 COG:ECs2140 KEGG:ns NR:ns ## COG: ECs2140 COG0697 # Protein_GI_number: 15831394 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 465 96.0 1e-131 MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNL LLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLHGKQLAGI ALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVIW SALIPIIPFFVASLILDGSASMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYE TWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFGLRWRKAVKVRG >gi|299857039|gb|ADWS01000025.1| GENE 17 15273 - 15686 252 137 aa, chain - ## HITS:1 COG:ECs4624 KEGG:ns NR:ns ## COG: ECs4624 COG2188 # Protein_GI_number: 15833878 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 3 137 98 232 238 105 35.0 2e-23 MKFEVQDASPTIATELNLVTGEQVYYIKRLRFIEDNAAQLEETWMSVARFPDLTVSHMQK SKFSYIENECGIKIIGTFETFSPTFPTPEIASILRISPRDPILKIQTQAVDSNSIPLDYS LLYSNIFEFQVKYFFPR >gi|299857039|gb|ADWS01000025.1| GENE 18 16229 - 16480 319 83 aa, chain + ## HITS:1 COG:lin2905 KEGG:ns NR:ns ## COG: lin2905 COG1440 # Protein_GI_number: 16801964 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 77 21 95 100 73 50.0 8e-14 MIDHANAISLEVNISALAIAEAKGKIKNNEVDVVLLGPQVRFQKPEIEAVAQGKMPVAVI EMKDYGTMNGQAVLEFAMKLLQE >gi|299857039|gb|ADWS01000025.1| GENE 19 16595 - 17212 249 205 aa, chain + ## HITS:1 COG:lin2906 KEGG:ns NR:ns ## COG: lin2906 COG1455 # Protein_GI_number: 16801965 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 195 1 195 450 258 68.0 4e-69 MGLMASFERGMERFLVPVAIKLNSQKHVAAVRDGFVFTFPIIMASSLIILINFAILSPDG FIAGLLHLNSIFPNLEKAQAIFTPVMNGSVNIMSIMITFLVARNMAISYEQDDLLCGLTA IGAFFIVYTPYQMIDGQAFLTTKYLGAQGLFVAVIVALITSEIFCRLARNPKITITMPAA VPPAVARSFKVLLPIFFCHGVLFRT >gi|299857039|gb|ADWS01000025.1| GENE 20 17190 - 17918 528 242 aa, chain + ## HITS:1 COG:lin2906 KEGG:ns NR:ns ## COG: lin2906 COG1455 # Protein_GI_number: 16801965 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 2 235 200 433 450 319 71.0 3e-87 MVFFSALNYCLTLISPAGLNDLIYTLIQTPLKHMGTNIFAVIILGAVGNFLWVLGIHGPN TTSAIRETVFSEANLENLSWAAQHGTTWGVPYPITWTSINDAFANCGGSGMTLGLLLAIF IASKRAEYRDLAKMSFIPGIFNINEPIMFGLPIVLNPIMMVPFIMVPIVNCAIGYFFVSM EIIPPVAYAVPWTTPGPLIAFLGTGGNWLALLVSFLCLGVATMIYLPFVIAANKVNNMTT NV >gi|299857039|gb|ADWS01000025.1| GENE 21 17946 - 18257 337 103 aa, chain + ## HITS:1 COG:YPO2680 KEGG:ns NR:ns ## COG: YPO2680 COG1447 # Protein_GI_number: 16122885 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Yersinia pestis # 3 102 16 115 115 82 51.0 2e-16 MFADEELVMELLVNAGQARSDAMEAIRCAGQKDWQGATQLMASSESACLQAHKIQTALIS QDEGCGKIKVNLILIHAQDHLMNAILCQDLAREIISLRKELHA >gi|299857039|gb|ADWS01000025.1| GENE 22 18313 - 19986 1276 557 aa, chain + ## HITS:1 COG:yieC KEGG:ns NR:ns ## COG: yieC COG4580 # Protein_GI_number: 16131588 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli K12 # 20 557 19 538 538 547 53.0 1e-155 MNIKTLNVSLLSFSIITALFPLNAMATKLTIEQRLELLENELSQNKQELKATQNELGVYK SRLSTLQKSITENKYKSASLAEISATSPVADNIKNENGEQNSFTAAHTINGSQQVAVIES KGDKTTIESVTLKDISKYIKDDIGFSYQGYFRSGWGTGNHGSPQTYAAGSLGRFGNEMSG WFDLTLNQRVYNQDGKTANAVVTYDGNVGEQYNDAWFGDSANENIMQFSDIYLTTRGFLP FAPEADFWVGKHKLPQYEIQMLDWKTLTTDVAAGVGIENWALGVGLFDMSLSRDDVDVYS RDFSRTSQMNTNSVDVRYRNIPLWDDATLSLMAKYSAPNKTDQQQDNENDNSYFEMKDSW MLTSVLRQNLQRDTFNEFTLQVANNSYASSFASFSDASNTMAHGRYYYGDHTNGIAWRLI SQGEMYLTDNIIMANALVYSHGEDVYSYESGAHSDFDSIRTVIRPAWIWNTWNQTGLELG WFKQQNKTQQGVTLNESAYKTTLWHALKVGESILGSRPEIRFYGTYINILDNELSNFKFN ENSKDEFMAGIQAEVWW >gi|299857039|gb|ADWS01000025.1| GENE 23 20011 - 21450 1007 479 aa, chain + ## HITS:1 COG:SP0303 KEGG:ns NR:ns ## COG: SP0303 COG2723 # Protein_GI_number: 15900236 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 1 479 1 477 478 739 71.0 0 MSGFKKGFLWGGAVAAHQLEGGWNEGGKGISIADVMTAGAHGVPREVTEGVIDGLNYPNH EAIDFYHRYKTDIQLFAEMGFKCFRTSIAWTRIFPQGDEQEPNEEGLQFYDDLFDECLKQ GMEPVVTLSHFEMPYHLVTKYGGWRNRKLIDFFIRFASTVFTRYKEKVKYWMTFNEINNQ VNFSESLCPFTNSGILYSPEEDINEREQIMYQAVHYELVASALAVQTGKSINPEFNIGCM IAMCPIYPLTCAPNDMMMATKAMHRRYWFTDVHARGYYPQHMLNYFARKGFNLDITPEDN AILASGCVDFIGFSYYMSFTTQFSPDNPQLDYVEPRDLVSNPYIDTSEWGWQIDPAGLRY SLNWFWDHFQLPLFIVENGFGAVDQRQADGTVNDHYRIDYFASHIREMKKAVVEDGVDLI GYTPWGCIDLVSAGTGEMKKRYGMIYVDKDNEGKGTLERIRKASFYWYRDLIANNGENI >gi|299857039|gb|ADWS01000025.1| GENE 24 21507 - 21725 136 72 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E1673 NR:ns ## KEGG: SbBS512_E1673 # Name: marB # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 71 1 71 79 121 100.0 7e-27 MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEQPPFDLNHMGTGSDKSD ALGVPYYNQHAM >gi|299857039|gb|ADWS01000025.1| GENE 25 21757 - 22140 287 127 aa, chain - ## HITS:1 COG:ECs2138 KEGG:ns NR:ns ## COG: ECs2138 COG2207 # Protein_GI_number: 15831392 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 127 3 129 129 233 100.0 9e-62 MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLH PLNHYNS >gi|299857039|gb|ADWS01000025.1| GENE 26 22160 - 22594 393 144 aa, chain - ## HITS:1 COG:STM1520 KEGG:ns NR:ns ## COG: STM1520 COG1846 # Protein_GI_number: 16764865 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 144 1 144 144 258 91.0 3e-69 MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFKVLCSIRCAACITPVEL KKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTSGAAICEQCHQLVGQDLH QELTKNLTADEVATLEHLLKKVLP >gi|299857039|gb|ADWS01000025.1| GENE 27 22806 - 23471 638 221 aa, chain + ## HITS:1 COG:marC KEGG:ns NR:ns ## COG: marC COG2095 # Protein_GI_number: 16129488 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Escherichia coli K12 # 1 221 1 221 221 366 100.0 1e-101 MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQSLMASVYVFAIMMVAYY AGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSPEAKSKSEELEDEPSANIA FVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAPPLIFFLVAVILWGSLRSSGA IMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIKTYH >gi|299857039|gb|ADWS01000025.1| GENE 28 23496 - 24686 867 396 aa, chain - ## HITS:1 COG:ydeA KEGG:ns NR:ns ## COG: ydeA COG2814 # Protein_GI_number: 16129487 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 396 1 396 396 572 100.0 1e-163 MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGIMLTIYAWV VALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFTVLVISRIGVAFAHAIFWS ITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIVGQYFGWRMTFFAIGIGALIT LLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIA GFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIH LGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQVSLHW SMSMIGYVGAVPAFAALIWSIIIFRRWPVTLEEQTQ >gi|299857039|gb|ADWS01000025.1| GENE 29 24836 - 25543 312 235 aa, chain - ## HITS:1 COG:no KEGG:B21_01495 NR:ns ## KEGG: B21_01495 # Name: yneK # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 235 137 371 371 446 97.0 1e-124 MGRVFQTGVERVLFLFLNDFIEQFPMINPGVPIKRAHTPHIEPLPPDHHTAADYLRQFDL LVLNFISRGNFVILPRLWNNSEVHRWFVNKDPNLITAILDITDSELKEDLLQSLMDSLGS NKHVLPEVCICFLSLLAEQESPHFQDLFFFFANMLLHYHQFMNPNESDLNGVLMPASLSD DKIIKHMARRTLELFVKNETPPKVTHEDLVKNRPRSPVRPPIPATSKTPDLPERH >gi|299857039|gb|ADWS01000025.1| GENE 30 26029 - 26910 666 293 aa, chain - ## HITS:1 COG:ECs2133 KEGG:ns NR:ns ## COG: ECs2133 COG0583 # Protein_GI_number: 15831387 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 293 1 293 293 582 98.0 1e-166 MDLTQLEMFNAVAEAGSITQAAAIVHRVPSNLTTRLRQLETELGVDLFIRENQRLRLSPA GHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAVRIPATLAEFNHRYPKIQF SLSTGPSGTMLEGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIVTPQGHAPVIRASQV NGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVVAGAGIALIPRSMLE SMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTLPLEAFIQLLDVPDSAKQGYQ >gi|299857039|gb|ADWS01000025.1| GENE 31 27011 - 28399 1352 462 aa, chain + ## HITS:1 COG:yneI KEGG:ns NR:ns ## COG: yneI COG1012 # Protein_GI_number: 16129484 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 462 9 470 470 887 99.0 0 MTITPATHAISINPATGEQLSVLPWAGANDIENALQLAAAGFRDWRETNIDYRAEKLRGI GKALRARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQA VIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLKHAPNVMGCAQLIAQVFKDAG IPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDP FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDP RDEENALGPMARFDLRDELHHQVEKTLAQGARLLLGGEKMAGAGNYYPPTVLANVTPEMT AFREEMFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFIN GYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDRI >gi|299857039|gb|ADWS01000025.1| GENE 32 28475 - 29389 587 304 aa, chain + ## HITS:1 COG:ECs2131 KEGG:ns NR:ns ## COG: ECs2131 COG2066 # Protein_GI_number: 15831385 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Escherichia coli O157:H7 # 1 304 5 308 308 612 100.0 1e-175 MDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIAICTVDGQLFQAGDAQERFSI QSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLVQLEMEQGIPRNPFINAGALVVC DMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARSEFEHSARNAAIAWLMKSFGNFHHD VTTVLQNYFHYCALKMSCVELARTFVFLANQGKAIHIDEPVVTPMQARQINALMATSGMY QNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAIAVWSPELDDAGNSLAGIAVLEQLTKQLG RSVY >gi|299857039|gb|ADWS01000025.1| GENE 33 29389 - 29748 257 119 aa, chain + ## HITS:1 COG:no KEGG:B21_01491 NR:ns ## KEGG: B21_01491 # Name: yneG # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 119 1 119 119 239 100.0 3e-62 MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGK QTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVVQMNQP >gi|299857039|gb|ADWS01000025.1| GENE 34 29887 - 31305 1279 472 aa, chain + ## HITS:1 COG:Z2182_2 KEGG:ns NR:ns ## COG: Z2182_2 COG2199 # Protein_GI_number: 15801615 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 EDL933 # 288 472 1 185 185 383 98.0 1e-106 MHVHPISTFRLFQEGHLLRNSIAIFALTTLFYFIGAELRLVHELSLFWPLNGVMAGVFAR YVWLNRLHYYAISYVAMLVYDAITTEWGLVSLVINFSNMMFIVTVALLVVRDKRLGKNKY EPVSALRLFNYCLIAALLCAIVGAIGSVSIDSLDFWPLLADWFSEQFSTGVLIVPCMLTL AIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTF VTGAVEIVLVANSVIDISVGSPFSIPEMFSARLGIATMAICPIMVSFSVAAINSLMKQVA LRADFDYLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSV FALHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYL TVSIGVGSGRASYRTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV >gi|299857039|gb|ADWS01000025.1| GENE 35 31532 - 32983 1693 483 aa, chain + ## HITS:1 COG:ECs2128 KEGG:ns NR:ns ## COG: ECs2128 COG0246 # Protein_GI_number: 15831382 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 483 1 483 483 994 99.0 0 MKTLNRRDFPGAQYPERIIQFGEGNFLRAFVDWQIDLLNEHTDLNSGVVVVRPIETSFPP SLSTQDGLYTTIIRGLNEKGEAVSDARLIRSVNREISVYSEYDEFLKLAHNPEMRFVFSN TTEAGISYHAGDKFDDAPAVSYPAKLTRLLFERFSHFNGALDKGWIIIPCELIDYNGDAL RELVLRYAQEWALPEAFIQWLDQANSFCSTLVDRIVTGYPRDEVAKLEEELGYHDGFLDT AEHFYLFVIQGPKSLATELRLDKYPLNVLIVDDIKPYKERKVAILNGAHTALVPVAFQAG LDTVGEAMNDAEICAFVEKAIYEEIIPVLDLPRDELESFASAVTGRFRNPYIKHQLLSIA LNGMTKFRTRILPQLLAGQKAKGTLPARLTFALAALIAFYRGERNGETYPVQDDAHWLER YQQLWSQHRDRVIGTQELVAIVLAEKDHWEQDLTQVPGLVEQVANDLDAILEKGMREAVR PLC >gi|299857039|gb|ADWS01000025.1| GENE 36 33191 - 34105 617 304 aa, chain + ## HITS:1 COG:yneE KEGG:ns NR:ns ## COG: yneE COG3781 # Protein_GI_number: 16129479 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 304 18 321 321 594 99.0 1e-170 MIVRPQQHWLRRIFVWHGSVLSKISSRLLLNFLFSIAVIFMLPWYTHLGIKFTLAPFSIL GVAIAIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKTTLPDSASVREFARLQIAF AHCLRMTLRKQPQAEVLAHYLKTEDLQPVLASNSPANRILLIMGEWLAVQRRNGQLSDIL FISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFI SVLISYTFISLDCLAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDEAEIPAKILPDRH YQLT >gi|299857039|gb|ADWS01000025.1| GENE 37 34109 - 34867 585 252 aa, chain - ## HITS:1 COG:tam KEGG:ns NR:ns ## COG: tam COG4106 # Protein_GI_number: 16129478 # Func_class: R General function prediction only # Function: Trans-aconitate methyltransferase # Organism: Escherichia coli K12 # 1 252 1 252 252 489 98.0 1e-138 MSDWNPSLYLHFAAERSRPAVELLARVPLENIEYVADLGCGPGNSTALLNQRWPAARITG IDSSPAMIAEARSALPDCQFVEADIRNWQPVQALDLIFANASLQWLPDHYELFPHLVSLL NPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVHAYYDILSEAGCEVDIWR TTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLKRYHQMLEEQYPLQENGQILLA FPRLFIVARRTE >gi|299857039|gb|ADWS01000025.1| GENE 38 34924 - 35214 379 96 aa, chain - ## HITS:1 COG:ECs2125 KEGG:ns NR:ns ## COG: ECs2125 COG1359 # Protein_GI_number: 15831379 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 188 98.0 2e-48 MHVTLVEINVHEDKIDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDED AVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP >gi|299857039|gb|ADWS01000025.1| GENE 39 35238 - 36113 840 291 aa, chain - ## HITS:1 COG:yneB KEGG:ns NR:ns ## COG: yneB COG1830 # Protein_GI_number: 16129476 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Escherichia coli K12 # 1 291 1 291 291 592 98.0 1e-169 MADLDDIKDGKDFRTDQPQQNIPFILKGCGALDWGMQSRLSRIFNPKTGKTVMLAFDHGY FQGPTTGLERIDINIAPLFEHADVLMCTRGILRSVVPPATNKPVVLRASGANSILAELSN EAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDM VRDQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVAGCPVPIVIAGGKKLPEREALEMCW QAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHNETADRAYELYLSEKQ >gi|299857039|gb|ADWS01000025.1| GENE 40 36140 - 37162 1096 340 aa, chain - ## HITS:1 COG:ECs2123 KEGG:ns NR:ns ## COG: ECs2123 COG1879 # Protein_GI_number: 15831377 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 340 1 340 340 643 99.0 0 MTLHRFKKIALLSALGIAAISMNVQAAESIAFIPKLVGVGFFTSGGNGAQQAGKELSVDV TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIQGVG QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF >gi|299857039|gb|ADWS01000025.1| GENE 41 37174 - 38166 1032 330 aa, chain - ## HITS:1 COG:ydeZ KEGG:ns NR:ns ## COG: ydeZ COG1172 # Protein_GI_number: 16129474 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 330 1 330 330 511 100.0 1e-145 MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGG IDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITL GTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLW LHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDL GASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGAL LIVVVVGRSVSLHRQQIKEWLARRANNPLP >gi|299857039|gb|ADWS01000025.1| GENE 42 38166 - 39194 972 342 aa, chain - ## HITS:1 COG:ydeY KEGG:ns NR:ns ## COG: ydeY COG1172 # Protein_GI_number: 16129473 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 342 1 342 342 539 99.0 1e-153 MLKFIQNNREITALLAVVLLFVFPGFLDRQYLSVQTLTMVYSSAQILILLAMGATLVMLT RNIDVSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAIVA TLGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLFGVSAIGWLTIILVAFMAWLLAKT AFGRSFYATGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTGTGL EMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGLVLLAV LVFDGRLRCALERNLRRQKYARFMTPPPSVKPASSGKNREAA >gi|299857039|gb|ADWS01000025.1| GENE 43 39188 - 40723 183 511 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 268 481 1 217 245 75 27 9e-13 MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGI TPADSGTLEIGGNNYVRLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQK MKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLF SRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTIALSGKTSELSTDDIIQAITPVV REKSLSASQKLWLELPGNRPQHAAGTPVLTLENLTGEGFRNVSLTLNAGEILGLAGLVGA GRTELAETLYGLRTLRGGRIMLNGKEINKLTTGERLLRGLVYLPEDRQSSGLNLDASLAW NVCALTHNLRGFWAKTAKDNATLERYRRALNIKFNQPEQAARTLSGGNQQKILIAKCLEA SPQALIVDEPTRGVDVSARNDIYQLLRSIAAQNVAVLLISSDMEEIELMADRVYVMHQGE ITHSALTGRDINVETIMRVAFGDSQRQEASC >gi|299857039|gb|ADWS01000025.1| GENE 44 40972 - 41925 839 317 aa, chain + ## HITS:1 COG:ECs2119 KEGG:ns NR:ns ## COG: ECs2119 COG2390 # Protein_GI_number: 15831373 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 589 100.0 1e-168 MTINDSVISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGII RVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQML AIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASS ADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGA VGDILGYFFDAKGDVVTDIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGY INALVTDQDTAAAILRS >gi|299857039|gb|ADWS01000025.1| GENE 45 42004 - 43143 882 379 aa, chain + ## HITS:1 COG:ydeV KEGG:ns NR:ns ## COG: ydeV COG1070 # Protein_GI_number: 16129470 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 369 1 369 530 751 99.0 0 MARLFTPSESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLN KNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNEGAPIWACANVDARAAREV SELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYMLS GELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCG LKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLGAPVTDPEMNVRVNPHV IPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWGVMP IFSDRMRFKNLVSRCAFLY >gi|299857039|gb|ADWS01000025.1| GENE 46 43145 - 43597 220 150 aa, chain + ## HITS:1 COG:ydeV KEGG:ns NR:ns ## COG: ydeV COG1070 # Protein_GI_number: 16129470 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 150 381 530 530 308 99.0 2e-84 MSIDPDKCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILA DVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTPDPEKHELYQD SRDKWQAVYQDQLGLVDHGLTTSLWKAPGL >gi|299857039|gb|ADWS01000025.1| GENE 47 44128 - 45585 820 485 aa, chain + ## HITS:1 COG:AGl3085 KEGG:ns NR:ns ## COG: AGl3085 COG4625 # Protein_GI_number: 15891657 # Func_class: S Function unknown # Function: Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 58 386 353 677 1341 69 27.0 2e-11 MNRIYRVIWNCNLQVFQACSELTRRAGKTSTVNLRKSSGLTTKFSRLTLGVLLALSGSAS GASLEVDNDQITNIDTDVAYDAYLVGWYGTGVLNILAGGNASLTTITTSVIGANEDSEGT VNVLGGTWRLYDSGNNARPLNVGQSGTGTLNIKQKGHVDGGYLRLGSSTGGVGTVNVEGE DSVLTTELFEIGSYGTGSLNITDKGYVTSSIVAILGYQAGSNGQVVVEKGGEWLIKNNDS SIEFQIGNQGTGEATIREGGLITAENTIIGGNATGIGTLNVQDQDSVITVRRLYNGYFGN GTLNISNNGLINNKEYSLVGVQDGSHGVVNVTDKGHWNFLGTGEAFRYIYIGDAGDGELN VSREGKVDSGIITAGMKETGTGNITVKDKNSVITNLGTNLGYDGHGEMNISNEGLVVSNG GSSLGYGETGVGNVSITTGGCGRSIRMSIPPLVLRASETSILAMAVSSYRKILLFWAIKQ AVSAH >gi|299857039|gb|ADWS01000025.1| GENE 48 45447 - 49547 2968 1366 aa, chain + ## HITS:1 COG:ydeU KEGG:ns NR:ns ## COG: ydeU COG3468 # Protein_GI_number: 16129468 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 901 1366 1 466 466 847 100.0 0 MWEVNKNVYTTIGVAGVGNLNISDGGKFVSQNITFLGDKASGIGTLNLMDATSSFDTVGI NVGNFGSGIVNVSNGATLNSTGYGFIGGNASGKGIVNISTDSLWNLKTSSTNAQLLQVGV LGKGELNITTGGIVKARDTQIALNDKSKGVVRVDGQNSLLETFNMYVGTSGTGTLTLTNS GTLNVEGGEVYLGVFEPAVGTLNIGAAHGEAAADAGYITNATKVEFGSGEGVFVFNHTNN SDAGYQVDMLITGDDKDGKVIHDAGHTVFNAGNTYSGKTLVNDGLLTIASHTADGVTGMG SSEVTIASPGTLDILASTNSAGDYTLTNALKGDGLMRVQLSSYDKMFGFTHATGTEFAGV AQLKDSTFTLERDNTAALTHAMLQSDSENTTSVKVGEQSIGGLAMNGGTLIFDTDIPAAT LAEGYISVDTLVVGAGDYTWKGRNYQVNGTGDVLIDVPKPWNDPMANNPLTTLNLLEHDD SHVGVQLVKAQTVIGSGGSLTLRDLQGDEVEADKTLHIAQNGTVVAEGDHGFRLTTAPGD GLYVNYGLKALNIHGGQKLTLAEHGGAYGATADMSAKIGGEGDLAINTVRQVSLSNGQND YQGATYVQMGTLRTDADGALGNTRELNISNAAIVDLNGSTQTVETFTGQMGSTVLFKEGA LTVNKGGISQGELTGGGNLNVTGGTLAIEGLNARYNALTSISPNAEVSLDNTQGLGRGNI ANDGLLTLKNVTGELRNSISGKGIVSATARTDVELDGDNSRFVGQFNIDTGSALSVNEQK NLGDASVINNGLLTISTERSWAMTHSISGSGDVTKLGTGILTLNNDSAAYQGTTDIVGGE IAFGSDSAINMASQHINIHNSGVMSGNVTTAGDVNVMPGGTLRVAKTTIGGNLENGGTVQ MNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGG VGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTP ADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQG SASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQ HSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSA DDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIE TEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGA RNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW >gi|299857039|gb|ADWS01000025.1| GENE 49 49756 - 50022 266 88 aa, chain + ## HITS:1 COG:hipB KEGG:ns NR:ns ## COG: hipB COG1396 # Protein_GI_number: 16129467 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 88 1 88 88 137 97.0 4e-33 MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKI LQSLELSMTLCDTKNASPESTEQQDLEW >gi|299857039|gb|ADWS01000025.1| GENE 50 50022 - 50216 145 64 aa, chain + ## HITS:1 COG:hipA KEGG:ns NR:ns ## COG: hipA COG3550 # Protein_GI_number: 16129466 # Func_class: R General function prediction only # Function: Uncharacterized protein related to capsule biosynthesis enzymes # Organism: Escherichia coli K12 # 1 64 1 64 440 139 100.0 2e-33 MPKLVTWMNNQRVGELTKLANGAHTFKYAPEWLASRYARPLSLSLPLQRGNITSDAVFNF FDNL >gi|299857039|gb|ADWS01000025.1| GENE 51 50364 - 51344 350 326 aa, chain + ## HITS:1 COG:hipA KEGG:ns NR:ns ## COG: hipA COG3550 # Protein_GI_number: 16129466 # Func_class: R General function prediction only # Function: Uncharacterized protein related to capsule biosynthesis enzymes # Organism: Escherichia coli K12 # 1 326 115 440 440 666 98.0 0 MAWEKLTEARLEEVLTAYKADIPLGMIREENDFRISVAGAQEKTALLRIGNDWCIPKGIT PTTHIIKLPIGEIRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGRVRALAVE RFDRRWNTERTVLLRLPQEDMCQTFGLPSSVKYESDGGPGIARIMAFLMGSSEALRDRYD FIKFQVFQWLIGATDGHAKNFSVFIQAGGSYRLTPFYDIISAFPVLGGTGIHISDLKLAM GLNASKGKKTAIDKIYPRHFLATAKVLRFPEVQMHEILSDFARMIPAALDNVKTSLPTDF PENLVTAVETNVLRLHGRLSREYGSK >gi|299857039|gb|ADWS01000025.1| GENE 52 52294 - 52857 331 187 aa, chain + ## HITS:1 COG:ECs2113 KEGG:ns NR:ns ## COG: ECs2113 COG3539 # Protein_GI_number: 15831367 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 285 100.0 3e-77 MKLKHVGMIVVSVLAMSSAAVSAAEGDESVTTTVNGGVIHFKGEVVNAACAIDSESMNQT VELGQVRSSRLAKAGDLSSAVGFNIKLNDCDTNVSSNAAVAFLGTTVTSNDDTLALQSSA AGSAQNVGIQILDRTGEVLILDGATFSAKTDLIDGTNILPFQARYIALGQSVAGTANADA TFKVQYL >gi|299857039|gb|ADWS01000025.1| GENE 53 53218 - 53928 406 236 aa, chain + ## HITS:1 COG:Z2201 KEGG:ns NR:ns ## COG: Z2201 COG3121 # Protein_GI_number: 15801632 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 EDL933 # 1 236 4 239 239 437 99.0 1e-122 MQTTRTPYSISFMATVLLLLLFACHSTVANAAVALGATRVIYPANQKQVLLPVTNNDPAS VYLIQSWIENAGDQKDTQFVITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKA IPAMEKDQKNENTLQLAIISRIKMFYRPTNLAMAPEEAPAMLRFRRSGSKLTLINPTPYF ITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAATGDISFQTINDYGALTPRIKATMQ >gi|299857039|gb|ADWS01000025.1| GENE 54 53970 - 56621 1191 883 aa, chain + ## HITS:1 COG:Z2203 KEGG:ns NR:ns ## COG: Z2203 COG3188 # Protein_GI_number: 15801633 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 EDL933 # 1 883 1 883 883 1667 98.0 0 MTAFRAAFKAYRMHQVLILPRFARLTIALGLATAVFPVDAEYYFNPRFLSNDLAESVDLS AFTKGREAPPGTYRVDIYLNDEFMTSRDITFIADDNNADLIPCLSTDLLVSLGIKKSALL DNKEHSAEKHVPDNSACTPLQDRLADASTEFDVGQQHLSLSVPQIYVGRMARGYVSPELW EEGINAGLLNYSFNGNSINNRSNHNAGKSNYAYLNLQSGINIGSWRLRDNSTWSYNSGSS NSSNSNKWQHINTSAERDIIPLRSRLTVGDSYTDGDIFDSVNFRGLKINSTEAMLPDSQH GFAPVIHGIARGTAQVSVKQNGYDVYQTTVPPGPFTIDDINSAANGGDLQVTIKEADGSI QTLYVPYSSVPVLQRAGYTRYALAMGEYRSGNNLQSSPKFIQGSLMHGLEGNWTPYGGMQ IAEDYQAFNLGIGKDLGLFGAFSFDITQANTTLADGTRHSGQSVKSVYSKSFYQTGTNIQ VAGYRYSTQGFYNLSDSAYSRMSGYTVKPPTGDTNEQTQFIDYFNLFYSKRGQEQISISQ QLGNYGTTFFSASRQSYWNTSRSDQQISFGLNVPFGDITTSLNYSYSNNIWQNDRDHLLA FTLNVPFSHWMRTDSQSAFRNSNASYSMSNDLKGGMTNLSGVYGTLLPDNNLNYSVQVGN THGGNTSSGTSGYSSLNYRGAYGNTNVGYSRNGDSSQIYYGMSGGIIAHADGITFGQPLG DTMVLVKAPGADNVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETV VTVIPTHGAIARATFNAQIGGKVLMTLKYGNKSVPFGAIVTHGENKNGSIVAENGQVYLT GLPQSGKLQVSWGKDKNSNCIVEYKLPEVSPGTLLNQQTAICR >gi|299857039|gb|ADWS01000025.1| GENE 55 56635 - 57165 358 176 aa, chain + ## HITS:1 COG:ydeS KEGG:ns NR:ns ## COG: ydeS COG3539 # Protein_GI_number: 16129463 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 176 1 176 176 337 99.0 6e-93 MKYNNIIFLGLCLGLTTYSALSADSVIKISGRVLDYGCTVSSDSLNFTVDLQKNSARQFP TTGSTSPVVPFQITLSECSKGTTGVRVAFNGIEDAENNTLLKLDEGSNTASGLGIEILDA NMRPVKLNDLHAGMQWIPLVPEQNNILPYSARLKSTQKSVNPGLVRASATFTLEFQ >gi|299857039|gb|ADWS01000025.1| GENE 56 57178 - 57681 217 167 aa, chain + ## HITS:1 COG:ydeR KEGG:ns NR:ns ## COG: ydeR COG3539 # Protein_GI_number: 16129462 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 167 1 167 167 308 100.0 3e-84 MKRLHKRFLLATFCALFTATLQAADVTITVNGRVVAKPCTIQTKEANVNLGDLYTRNLQQ PGSASGWHNITLSLTDCPVETSAVTAIVTGSTDNTGYYKNEGTAENIQIELRDDQDAALK NGDSKTVIVDEITRNAQFPLKARAITVNGNASQGTIEALINVIYTWQ >gi|299857039|gb|ADWS01000025.1| GENE 57 57740 - 58654 266 304 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1629 NR:ns ## KEGG: ECO103_1629 # Name: ydeQ # Def: putative fimbrial-like adhesin protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 304 1 304 304 573 100.0 1e-162 MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDL SQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGD KTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNNVVM PTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLSFYLSGATTDSSRQVFANTAPDA TKASGVGVSLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVAAGTVQSVIGVT FIYE >gi|299857039|gb|ADWS01000025.1| GENE 58 58988 - 61267 1255 759 aa, chain + ## HITS:1 COG:ydeP KEGG:ns NR:ns ## COG: ydeP COG0243 # Protein_GI_number: 16129460 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 759 1 759 759 1563 99.0 0 MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHS ASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSD CYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSN MCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKM IAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDA ASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAER TIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKP SAEFLARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPL TQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKSGAQAVTVEDSMSMIHASRGV LKPAGVMLKSECAVVAGIAQATLPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRH PGGFHLINAAAERRWMTPSGKANFITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGM DDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMAD RSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN >gi|299857039|gb|ADWS01000025.1| GENE 59 61515 - 61712 142 65 aa, chain + ## HITS:1 COG:no KEGG:SSON_1623 NR:ns ## KEGG: SSON_1623 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 65 1 65 65 88 100.0 8e-17 MYATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLGISEMGRIARDLTHFII NSLQD >gi|299857039|gb|ADWS01000025.1| GENE 60 61787 - 62548 338 253 aa, chain + ## HITS:1 COG:ydeO KEGG:ns NR:ns ## COG: ydeO COG2207 # Protein_GI_number: 16129458 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 253 1 253 253 506 99.0 1e-143 MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFTENTIKK YLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERNHHNFSELLLFSCLSIFAA CKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLKQEQTTFSQ ILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVSKEYRCQSHT GMNTGNTMSALAI Prediction of potential genes in microbial genomes Time: Sun May 15 22:31:27 2011 Seq name: gi|299857038|gb|ADWS01000026.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont25.1, whole genome shotgun sequence Length of sequence - 61754 bp Number of predicted genes - 52, with homology - 52 Number of transcription units - 32, operones - 11 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 6/0.000 - CDS 3 - 1110 805 ## COG3188 P pilus assembly protein, porin PapC - Term 1148 - 1185 7.8 2 1 Op 2 3/0.667 - CDS 1192 - 1755 648 ## COG3539 P pilus assembly protein, pilin FimA - Prom 1933 - 1992 8.4 - Term 2374 - 2418 10.1 3 2 Tu 1 . - CDS 2430 - 2900 454 ## COG2062 Phosphohistidine phosphatase SixA - Prom 3018 - 3077 5.5 4 3 Op 1 20/0.000 - CDS 3118 - 5262 1644 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 5 3 Op 2 3/0.667 - CDS 5262 - 6572 1284 ## COG0183 Acetyl-CoA acetyltransferase - Prom 6601 - 6660 6.0 - Term 6694 - 6734 11.1 6 4 Tu 1 . - CDS 6752 - 7036 428 ## COG3691 Uncharacterized protein conserved in bacteria + Prom 7248 - 7307 6.4 7 5 Tu 1 . + CDS 7408 - 8748 1370 ## COG2067 Long-chain fatty acid transport protein + Term 8770 - 8802 5.6 + Prom 9024 - 9083 9.9 8 6 Tu 1 . + CDS 9113 - 10171 454 ## ECO103_2809 hypothetical protein + Term 10318 - 10349 1.0 - Term 10296 - 10348 11.0 9 7 Tu 1 . - CDS 10353 - 11108 882 ## COG2853 Surface lipoprotein - Prom 11187 - 11246 4.3 10 8 Tu 1 . + CDS 11403 - 12335 978 ## COG2116 Formate/nitrite family of transporters + Term 12436 - 12503 21.3 + TRNA 12411 - 12482 58.1 # Arg CCT 0 0 + Prom 12413 - 12472 77.2 11 9 Op 1 . + CDS 12669 - 13943 415 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 12 9 Op 2 . + CDS 13974 - 14855 113 ## EFER_0815 hypothetical protein from phage origin + Prom 14869 - 14928 2.3 13 10 Tu 1 . + CDS 14958 - 15173 132 ## EFER_0814 hypothetical protein from phage origin + Term 15192 - 15227 1.7 - Term 15178 - 15215 4.5 14 11 Tu 1 . - CDS 15223 - 15417 162 ## EFER_0813 conserved hypothetical protein from phage origin - Prom 15437 - 15496 4.3 + Prom 15373 - 15432 3.3 15 12 Op 1 . + CDS 15534 - 15710 147 ## EFER_0812 phage immunity repressor protein (fragment) 16 12 Op 2 . + CDS 15703 - 16062 201 ## EFER_0811 hypothetical protein from phage origin 17 12 Op 3 . + CDS 16094 - 16378 197 ## SeSA_A0379 hypothetical protein 18 12 Op 4 . + CDS 16375 - 16758 455 ## EFER_0809 conserved hypothetical protein from phage origin + Term 16856 - 16900 4.1 + Prom 16920 - 16979 1.7 19 13 Tu 1 . + CDS 17019 - 19427 1561 ## COG5519 Superfamily II helicase and inactivated derivatives + Prom 19563 - 19622 5.0 20 14 Op 1 . + CDS 19828 - 20571 644 ## EFER_0807 putative capsid morphogenesis protein from phage ( head size determination protein) 21 14 Op 2 . + CDS 20568 - 21119 263 ## EFER_0806 putative polarity suppression protein from phage origin 22 14 Op 3 . + CDS 21125 - 21397 178 ## EFER_0805 putative activator from phage origin ( Ogr family transcription activator) + Term 21419 - 21449 1.0 + Prom 21934 - 21993 5.7 23 15 Tu 1 . + CDS 22158 - 23354 241 ## PCC8801_4362 hypothetical protein + Term 23367 - 23432 4.1 - Term 24054 - 24105 -0.7 24 16 Op 1 4/0.250 - CDS 24339 - 25586 554 ## COG0477 Permeases of the major facilitator superfamily - Term 25600 - 25638 -0.4 25 16 Op 2 . - CDS 25658 - 26572 405 ## COG0524 Sugar kinases, ribokinase family - Prom 26726 - 26785 3.9 + Prom 26689 - 26748 5.6 26 17 Tu 1 . + CDS 26788 - 28221 661 ## COG1621 Beta-fructosidases (levanase/invertase) 27 18 Tu 1 . - CDS 28229 - 29179 576 ## COG1609 Transcriptional regulators - Prom 29324 - 29383 5.5 + Prom 29303 - 29362 4.6 28 19 Op 1 4/0.250 + CDS 29467 - 29685 218 ## COG2610 H+/gluconate symporter and related permeases 29 19 Op 2 . + CDS 29703 - 31031 1207 ## COG3048 D-serine dehydratase 30 20 Op 1 19/0.000 - CDS 31139 - 32677 555 ## COG0477 Permeases of the major facilitator superfamily 31 20 Op 2 . - CDS 32677 - 33840 746 ## COG1566 Multidrug resistance efflux pump + Prom 34083 - 34142 6.9 32 21 Tu 1 . + CDS 34256 - 34870 345 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 35081 - 35121 -0.9 + Prom 35400 - 35459 3.4 33 22 Tu 1 . + CDS 35529 - 38468 1073 ## COG0642 Signal transduction histidine kinase + Term 38475 - 38513 4.4 - Term 38461 - 38501 4.8 34 23 Op 1 2/0.917 - CDS 38524 - 39669 466 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase - Term 39678 - 39714 2.2 35 23 Op 2 3/0.667 - CDS 39743 - 40687 594 ## COG0679 Predicted permeases 36 23 Op 3 4/0.250 - CDS 40757 - 42451 1073 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Term 42469 - 42497 0.5 37 23 Op 4 . - CDS 42505 - 43755 1035 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase - Prom 43781 - 43840 8.4 - Term 44165 - 44213 10.3 38 24 Tu 1 . - CDS 44267 - 44899 566 ## SDY_2573 hypothetical protein - Prom 44990 - 45049 7.2 39 25 Tu 1 . - CDS 45547 - 45789 291 ## SDY_2575 hypothetical protein - Prom 45831 - 45890 4.3 40 26 Tu 1 . + CDS 46142 - 47062 857 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 47096 - 47136 4.1 - Term 47500 - 47531 4.1 41 27 Tu 1 . - CDS 47554 - 48792 1287 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 49000 - 49059 4.7 + Prom 48948 - 49007 6.5 42 28 Op 1 9/0.000 + CDS 49187 - 50866 1458 ## COG3275 Putative regulator of cell autolysis 43 28 Op 2 3/0.667 + CDS 50881 - 51615 772 ## COG3279 Response regulator of the LytR/AlgR family 44 28 Op 3 . + CDS 51628 - 52485 527 ## COG2207 AraC-type DNA-binding domain-containing proteins 45 29 Op 1 3/0.667 - CDS 52488 - 54983 2662 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 46 29 Op 2 3/0.667 - CDS 55008 - 56045 888 ## COG1363 Cellulase M and related proteins 47 29 Op 3 3/0.667 - CDS 56045 - 57130 1134 ## COG0006 Xaa-Pro aminopeptidase 48 29 Op 4 7/0.000 - CDS 57145 - 58392 1477 ## COG1299 Phosphotransferase system, fructose-specific IIC component 49 29 Op 5 3/0.667 - CDS 58414 - 58740 550 ## COG1445 Phosphotransferase system fructose-specific component IIB - Prom 58804 - 58863 3.1 - Term 58910 - 58945 5.1 50 30 Tu 1 . - CDS 58959 - 59924 1122 ## COG0837 Glucokinase - Prom 59959 - 60018 2.5 + Prom 59894 - 59953 5.0 51 31 Tu 1 . + CDS 60128 - 61384 943 ## COG0038 Chloride channel protein EriC + Term 61427 - 61460 1.3 + Prom 61400 - 61459 2.6 52 32 Tu 1 . + CDS 61499 - 61754 245 ## ECDH10B_2555 hypothetical protein Predicted protein(s) >gi|299857038|gb|ADWS01000026.1| GENE 1 3 - 1110 805 369 aa, chain - ## HITS:1 COG:yfcUm KEGG:ns NR:ns ## COG: yfcUm COG3188 # Protein_GI_number: 16132272 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 369 1 370 881 712 97.0 0 MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVE PGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELVAQFGLKEDVAKNLQWSHD AKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWDPPSRWDDGISGIVADYSINA QTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDEFSGDETQKKWEW SRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVA HTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMP YLTRPGQVR >gi|299857038|gb|ADWS01000026.1| GENE 2 1192 - 1755 648 187 aa, chain - ## HITS:1 COG:yfcV KEGG:ns NR:ns ## COG: yfcV COG3539 # Protein_GI_number: 16130272 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 187 1 187 187 294 97.0 6e-80 MSKFVKTAIAAAMVMGVFTSTATIAAVNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIG AEKLKNNGTTTPKSFQIRLQDCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNN VSLAIGDSLGTSYKSGMGIDQKIVKDTSTNKGKAKQTLNFKAWLVGAADAPDLGNFEANT TFQITYL >gi|299857038|gb|ADWS01000026.1| GENE 3 2430 - 2900 454 156 aa, chain - ## HITS:1 COG:sixA KEGG:ns NR:ns ## COG: sixA COG2062 # Protein_GI_number: 16130273 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Escherichia coli K12 # 1 156 6 161 161 303 100.0 9e-83 MRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGD CLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETP PMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKAI >gi|299857038|gb|ADWS01000026.1| GENE 4 3118 - 5262 1644 714 aa, chain - ## HITS:1 COG:yfcX_2 KEGG:ns NR:ns ## COG: yfcX_2 COG1250 # Protein_GI_number: 16130274 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 308 714 1 407 407 789 99.0 0 MEMTSAFTLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSA KPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELA LACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAL KLGLVDDVVPHSILLEVAVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKT QGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG SDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGKV RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG IDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPA IYPLIGAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLG GPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARGESFWKTTATDLQ >gi|299857038|gb|ADWS01000026.1| GENE 5 5262 - 6572 1284 436 aa, chain - ## HITS:1 COG:yfcY KEGG:ns NR:ns ## COG: yfcY COG0183 # Protein_GI_number: 16130275 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 436 1 436 436 793 99.0 0 MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIE QLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRA GIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYST GLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVE DNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGY LRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSE RFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVT ACAAGGLGAAMVLEAE >gi|299857038|gb|ADWS01000026.1| GENE 6 6752 - 7036 428 94 aa, chain - ## HITS:1 COG:yfcZ KEGG:ns NR:ns ## COG: yfcZ COG3691 # Protein_GI_number: 16130276 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 94 9 102 102 159 98.0 2e-39 MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFASRAEAEQTLAALTEKARSVESEPCK ITPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR >gi|299857038|gb|ADWS01000026.1| GENE 7 7408 - 8748 1370 446 aa, chain + ## HITS:1 COG:ECs3227 KEGG:ns NR:ns ## COG: ECs3227 COG2067 # Protein_GI_number: 15832481 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Escherichia coli O157:H7 # 1 446 3 448 448 837 99.0 0 MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSGEGAIADDAGNVSRNPA LITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTAWVPNMHFVAPINDQFGWG ASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYRLNNAWSFGLGFNAVYARAKI ERFAGDLGQLVAGQIMQSPAGQTPQGQALAATANGIDSNTKIAHLNGNQWGFGWNAGILY ELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYGLPIPTATGGATQSGYLTLNLPEMW EVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATSTSGDTLFQKHEGFKDAYRIALGTTYYY DDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAFNKDASVDIGVSYMHGQSV KINEGPYQFESEGKAWLFGTNFNYAF >gi|299857038|gb|ADWS01000026.1| GENE 8 9113 - 10171 454 352 aa, chain + ## HITS:1 COG:no KEGG:ECO103_2809 NR:ns ## KEGG: ECO103_2809 # Name: yfdF # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 352 1 352 352 625 98.0 1e-178 MLPSISINNTSATYPESINENNNDEINGLVQEFKNLFNGKEGISTCIKHLLELIKNAIRV NDDPYRFNINNSSVTYIDIGSNDTDHINIGIDNQEPIELPANYKDKELVRTIINDNIVEK THDINNKEMIFSALKEIYDGDPSFIFDKISHKLRHTVTEFDESGNSEPTDLFTWYGKDKK GDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGDSLTQYCSEKARNASAWFESSKA IMAESFATGSDHQVVNELNGERLREPNEVFKRLGRAIRYNFQVDDAKFRRDNVKEIISTL FANKVDVDHPENKYKDFKDLEDKVEKRLQNRQTEYQNEINQLSAPGVNFDDI >gi|299857038|gb|ADWS01000026.1| GENE 9 10353 - 11108 882 251 aa, chain - ## HITS:1 COG:ECs3229 KEGG:ns NR:ns ## COG: ECs3229 COG2853 # Protein_GI_number: 15832483 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 513 99.0 1e-145 MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWR DYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGM ANPKLQRTEPHRFGSTLGHYGAGYGPYVQLPFYGSFTLRDDGGDMADGLYPVLSWLTWPM SVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYFQRHDFIANGGELKPQENPNAQA IQDDLKDIDSE >gi|299857038|gb|ADWS01000026.1| GENE 10 11403 - 12335 978 310 aa, chain + ## HITS:1 COG:ECs3230 KEGG:ns NR:ns ## COG: ECs3230 COG2116 # Protein_GI_number: 15832484 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 594 100.0 1e-170 MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHIRQDGEKELERDAMALL WSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTA VLPVMQKPTMSNVGLLMRLWGVVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVM KNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILY LVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKAEARQKAERAE NIKKNDKNPA >gi|299857038|gb|ADWS01000026.1| GENE 11 12669 - 13943 415 424 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 15 405 16 401 406 164 30 1e-39 MAINVLSPKQIENAKPKTNDYKLTDGGSLYLLVRKTGGKYWRMNYRFDGKQVTLALGVYP DVSLATARKRRDEARQLLADGRDPREAKKPKKEDPISPTFESVAREWHSRTIGHPEWKEI TRKKILREMENHLFPAIGSKPIDTLKTRDLMPMLVEMTEKGIGATTSRVKTTMTSIFRYA VQRGIVDYNPAHDLKGAITTPKVRHRPALPLERLPELLAKTRSYTGRPLTRLAVLFSLHT FVRSSELRHARWEEIDIENGLWTIPGQREEIAGVKFSERGAKMGAAHYVPLSSQAIGVLE DIRKISGEYLLVFPGDSNPYKPMSENTVNKALRTMGYDTQSDVCLHGFRAMACSALTESG LWSRDAVERQMSHQERNEVRAAYVHLAQHMQERRRMMQWWSNYLELNKDEFHAPYDLSGI NIIN >gi|299857038|gb|ADWS01000026.1| GENE 12 13974 - 14855 113 293 aa, chain + ## HITS:1 COG:no KEGG:EFER_0815 NR:ns ## KEGG: EFER_0815 # Name: not_defined # Def: hypothetical protein from phage origin # Organism: E.fergusonii # Pathway: not_defined # 1 293 1 293 293 590 98.0 1e-167 MQHSKENETIFLGNLWIDKKIPPLEYCSFERASRLLECEIDDLLHLYEIGAFNIAFKADG LAVRFNVNFLYKNQKMEIDLIHPVLTNQSLEMEFSTIWYDLKDDSFEHFENGLQIIGFAC GIWYADDMISDIKNGLAIDPDYEFRLKPVKIRDNVLMATASYEGNKVIDIPFEDLLIMRR DLELIWKSVKTGIPMPSLLTKRISSEPKIPKRLNNTAEHHAKNRGGLLNAAIYILAKYPS ECRGERKEISPEKWTNAIIKHLGELPPIFITNEQEILRKLRLAVNHAGLKQKG >gi|299857038|gb|ADWS01000026.1| GENE 13 14958 - 15173 132 71 aa, chain + ## HITS:1 COG:no KEGG:EFER_0814 NR:ns ## KEGG: EFER_0814 # Name: not_defined # Def: hypothetical protein from phage origin # Organism: E.fergusonii # Pathway: not_defined # 1 71 1 71 71 129 100.0 3e-29 MTLKTYPITGHARPRATADFLQISTVTLWRWEKNNPEFPKSIRISKRVSVYDAQEIRQWV KAQSAGLEEVV >gi|299857038|gb|ADWS01000026.1| GENE 14 15223 - 15417 162 64 aa, chain - ## HITS:1 COG:no KEGG:EFER_0813 NR:ns ## KEGG: EFER_0813 # Name: not_defined # Def: conserved hypothetical protein from phage origin # Organism: E.fergusonii # Pathway: not_defined # 1 64 1 64 64 107 100.0 1e-22 MGVIDVSTHKNERRGNPPFQFRLDPELRELMEQAQQQDGDESLAAWIKRILRKELQSRGL EPKN >gi|299857038|gb|ADWS01000026.1| GENE 15 15534 - 15710 147 58 aa, chain + ## HITS:1 COG:no KEGG:EFER_0812 NR:ns ## KEGG: EFER_0812 # Name: not_defined # Def: phage immunity repressor protein (fragment) # Organism: E.fergusonii # Pathway: not_defined # 1 58 19 76 76 107 100.0 1e-22 MAKQKCTWLFAAINRSQRNARPVMLRITADNERSARRRLAPDYVLSFAGRIPCGGEHA >gi|299857038|gb|ADWS01000026.1| GENE 16 15703 - 16062 201 119 aa, chain + ## HITS:1 COG:no KEGG:EFER_0811 NR:ns ## KEGG: EFER_0811 # Name: not_defined # Def: hypothetical protein from phage origin # Organism: E.fergusonii # Pathway: not_defined # 1 119 11 129 129 232 99.0 4e-60 MRNYPHPGERWQHERGWTVTIIRLIEASPSVALVNPEFSCEVLIRHDSDNQLSSCPLAWF EQRYTRLFDVPLFKPAPAPAGGSGSGPLTLHPSVLFIRWRERSIWCSAEPDDGHYSKFL >gi|299857038|gb|ADWS01000026.1| GENE 17 16094 - 16378 197 94 aa, chain + ## HITS:1 COG:no KEGG:SeSA_A0379 NR:ns ## KEGG: SeSA_A0379 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 94 1 94 94 164 91.0 1e-39 MNISNGHNGAQGQTLPEKHNTGAFAYGLSEDGFGKLTRARNACDMLQLLFSEYPSQAGAL DAGFAPGVAALMEYLRADLTDIAHSCALIEGGAR >gi|299857038|gb|ADWS01000026.1| GENE 18 16375 - 16758 455 127 aa, chain + ## HITS:1 COG:no KEGG:EFER_0809 NR:ns ## KEGG: EFER_0809 # Name: not_defined # Def: conserved hypothetical protein from phage origin # Organism: E.fergusonii # Pathway: not_defined # 1 127 1 127 127 216 94.0 3e-55 MNQPQVSIFPAEMTTALYRWAIASAWRQKMLNETGNDQYGPHSLTVERIEMAIALHIECA LINEYGEAQGAAAALALLTDMLEPSLLTAPPVLTARGCEVMAEMYRTLPAAFDVCCSTGV TLYQGEV >gi|299857038|gb|ADWS01000026.1| GENE 19 17019 - 19427 1561 802 aa, chain + ## HITS:1 COG:STM2745 KEGG:ns NR:ns ## COG: STM2745 COG5519 # Protein_GI_number: 16766057 # Func_class: L Replication, recombination and repair # Function: Superfamily II helicase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 238 800 126 686 689 649 58.0 0 MLNVPDVQELPVKPARQKAPKRDMGLTVAALMKESHTGESAYLTGKGFAGYPASLTGSVQ HISGKDFPAGSLLLPLTTNTGAVTGAQLIAPTGEKSILPGSTMKGAFVSLSPLPSEPPVQ VVITEGYATALTVSQLTAGCVVAAISAGNLPNVAQSLRARWPEVKIIIAGDNDFQDGGEN PGRAFAERAAKSVGGWMTLPPGEIKADWNDFHREHGITRAREAFRNGLVLCGEGRTQLPH GFRLTQEYLWYEKQVQRNGETEIQNVKICSPLRVTAITCDADGGNFGRLLEWEDTWGECR RWAMPMEMLSGSGEELRRVLLVNGLSYISTTGEARARLMEYISLCKPERRVTCVSRTGWH GQVYVLQDEVSGEGAEGVILQTTSVQGRDFRVSGTTEEWREHVSRYCTGNSRVAFAVSLA FAAPLLRLVGMDGGGYHLKGESTDGKTTTMKAATSVCGGPDYWQTWRATGNALEGCASRR NDAAMMLDEIREVDGREAGNIAYMLANGQGKGRAGTDGELRTRKQWRLLFFSTGELSLTE HAAKAGERTFAGMEVRMIQIPSDSGKFGVFEELHGFDSGKALAEHLEWATSCYYGSPFRE WLKALTADLNGLTAQAKSLMKEYAAALTPKDAGNQVGRAVNRFALVAMAGELATRLGITG WPEGEALRATRVCLNAWLKDRGHTANQEDIAALEQVRSFFTANQYSRFADWYDERNRPGN MVGWRRVEKGSTAQGTEAVTTFYVMPSGWKEICRGFDPRKVARLCADRGYLLPSTDGKLQ TTIRPPEMNPRRLYVFNSEVPG >gi|299857038|gb|ADWS01000026.1| GENE 20 19828 - 20571 644 247 aa, chain + ## HITS:1 COG:no KEGG:EFER_0807 NR:ns ## KEGG: EFER_0807 # Name: not_defined # Def: putative capsid morphogenesis protein from phage ( head size determination protein) # Organism: E.fergusonii # Pathway: not_defined # 1 247 1 247 247 432 100.0 1e-120 MNNTAVNNNLSTFPAVTQRALETMNTARNAWLEARRQQKAAADNIATIRQRRAEMEATTN TLNEEWRTLFRESQGVVSKEMKKLRTEIALGRETLEDFDELLAAQESENALLPQKAAELA GKYIHAHNILVDIRAKQIWEDFMQSHGKALIQTLSLLKSTMGREASAVVGVVNSVNDPDT VLKDFIHKHITRPALANDAMPEQDPVFKLAGVAPDYAARLDFSNQLSPAAMHKIKVRQEL AEKEKAV >gi|299857038|gb|ADWS01000026.1| GENE 21 20568 - 21119 263 183 aa, chain + ## HITS:1 COG:no KEGG:EFER_0806 NR:ns ## KEGG: EFER_0806 # Name: not_defined # Def: putative polarity suppression protein from phage origin # Organism: E.fergusonii # Pathway: not_defined # 1 183 1 183 183 347 97.0 2e-94 MTARGTPDQALTSFRNARILWAGHSESRKAVEQQIASLLTATEKPADYARQLELLRERLD VLKWQINCAARECIYSQHLLMEACTEAALSNFMQANGAALTSALAPFLKGRGGVDVAFRI LRSALVRQLAITPPEIVGDYREILDESGLMPDPGMIRDCQGSYTPAQHLRFQQRLNDIND IQE >gi|299857038|gb|ADWS01000026.1| GENE 22 21125 - 21397 178 90 aa, chain + ## HITS:1 COG:no KEGG:EFER_0805 NR:ns ## KEGG: EFER_0805 # Name: not_defined # Def: putative activator from phage origin ( Ogr family transcription activator) # Organism: E.fergusonii # Pathway: not_defined # 1 90 4 93 93 153 100.0 2e-36 MALKCPECGTVAHARTAAYEAPSVKRSWYQCQNLECSCTFTALESVDKIIMKPRRNEQEP DKSQTPVKQQQTLNRYGSASKLSSRQQIPV >gi|299857038|gb|ADWS01000026.1| GENE 23 22158 - 23354 241 398 aa, chain + ## HITS:1 COG:no KEGG:PCC8801_4362 NR:ns ## KEGG: PCC8801_4362 # Name: not_defined # Def: hypothetical protein # Organism: Cyanothece_PCC8801 # Pathway: not_defined # 1 395 1 414 422 134 30.0 7e-30 MNFEFVKEVFESNGIQCKVQEDKLYLQIDGKDVEVRFNEGYDEAISNFAKSRQYRYDLEK RTLIGYRTVEVFVQRLNQNIFETPSFEFKSNSSKTVQLSRATKEFSLSHFKSEDYKNFID KIVKRRLINRVRLGYVYFHTIVWTPITIKYNLKRKIEQQKMLDDALKCFDSCLFKLAVDY GQAWELYKQRRSLNIAYTSEDEVELNIPFASYDINLVNYYKVAVSSQFPSQSFLSYYHVL EYNFLSVSEEELQAKLRSNIQSTNFSGSLADIESIINTVKKHNDKSDEKDMLIRVLKKYI EPDELKQFIENFEESIGEKHYTKARKIFGENLSINIKNNEHMIPNTAHVLKHIRNALVHS SDKYNREDCHIPLTESEELVSFYIPLVSFLAEKIICAK >gi|299857038|gb|ADWS01000026.1| GENE 24 24339 - 25586 554 415 aa, chain - ## HITS:1 COG:ECs3241 KEGG:ns NR:ns ## COG: ECs3241 COG0477 # Protein_GI_number: 15832495 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 415 1 415 415 744 100.0 0 MALNIPFRNAYYRFASSYSFLFFISWSLWWSLYAIWLKGHLGLTGTELGTLYSVNQFTSI LFMMFYGIVQDKLGLKKPLIWCMSFILVLTGPFMIYVYEPLLQSNFSVGLILGALFFGLG YLAGCGLLDSFTEKMARNFHFEYGTARAWGSFGYAIGAFFAGIFFSISPHINFWLVSLFG AVFMMINMCFKDKDHQCVAADAGGVKKEDFIAVFKDRNFWVFVIFIVGTWSFYNIFDQQL FPVFYAGLFESHDVGTRLYGYLNSFQVVLEALCMAIIPFFVNRVGPKNALLIGVVIMALR ILSCALFVNPWIISLVKLLHAIEVPLCVISVFKYSVANFDKRLSSTIFLIGFQIASSLGI VLLSTPTGILFDHAGYQTVFFAISGIVCLMLLFGIFFLSKKREQIVMETPVPSAI >gi|299857038|gb|ADWS01000026.1| GENE 25 25658 - 26572 405 304 aa, chain - ## HITS:1 COG:ECs3242 KEGG:ns NR:ns ## COG: ECs3242 COG0524 # Protein_GI_number: 15832496 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 304 1 304 304 611 99.0 1e-175 MSAKVWVLGDAVVDLLPESDGRLLPCPGGAPANVAVGIARLGGTSGFIGRVGDDPFGALM QRTLLTEGVDITYLKQDEWHRTSTVLVDLNDQGERSFTFMVRPSADLFLETTDLPCWRHG EWLHLCSIALSAEPSRTSAFTAMTAIRHAGGFVSFDPNIREDLWQDEHLLRLCLRQALQL ADVVKLSEEEWRLISGKTQNDRDICALAKEYEIAMLLVTKGAEGVVVCYRGQVHHFAGMS VNCVDSTGAGDAFVAGLLTGLSSTGLSTDEREMRRIIDLAQRCGALAVTAKGAMTALPCR QELE >gi|299857038|gb|ADWS01000026.1| GENE 26 26788 - 28221 661 477 aa, chain + ## HITS:1 COG:ECs3243 KEGG:ns NR:ns ## COG: ECs3243 COG1621 # Protein_GI_number: 15832497 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 967 98.0 0 MTQSRLHAAQNALAKLHEHRGNTFYPHFHLAPPAGWMNDPNGLIWFNDRYHAFYQHHPMS EHWGPMHWGHATSDDMIHWQHEPIALAPGDDNDKDGCFSGSAVDDNGVLSLIYTGHVWLD GAGNDDAIREVQCLATSRDGIHFEKQGVILTPPEGIMHFRDPKVWREADTWWMVVGAKDP GNTGQILLYRGSSLREWTFDRVLAHADAGESYMWECPDFFSLGDQHYLMFSPQGMNAEGY SYRNRFQSGVIPGMWSPGRLFAQSGHFTELDNGHDFYAPQSFLAKDGRRIVIGWMDMWES PMPSKREGWAGCMTLARELSESNGKLLQRPVHEAESLRQQHQSVSPRTISNKYVLQENAQ AVEIQLQWALKNSDAEHYGLQLGTGMRLYIDNQSERLVLWRYYPHENLDGYRSIPLPQRD TLALRIFIDTSSVEVFINDGEAVMSSRIYPQPEERELSLYASHGVAVLQHGALWLLG >gi|299857038|gb|ADWS01000026.1| GENE 27 28229 - 29179 576 316 aa, chain - ## HITS:1 COG:ECs3244 KEGG:ns NR:ns ## COG: ECs3244 COG1609 # Protein_GI_number: 15832498 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 316 16 331 331 624 99.0 1e-179 MTVSRVMHNAESVRPATRDRVLQAIQTLNYVPDLSARKMRAQGRKPSTLAVLAQDTATTP FSVDILLAIEQTASEFGWNSFLINIFSEDDAARAARQLLAHRPDGIIYTTMGLRHITLPE SLYGENIVLANCVADDPALPSYIPDDYTAQYESTQHLLAAGYRQPLCFWLPESALATGYR RQGFEQAWRDAGRDLAEVKQFHMATGDDHYTDLASLLNAHFKPGKPDFDVLICGNDRAAF VAYQVLLAKGVRIPQDVAVMGFDNLVGVGHLFLPPLTTIQLPHDIIGREAALHIIEGREG GRVTRIPCPLLIRCST >gi|299857038|gb|ADWS01000026.1| GENE 28 29467 - 29685 218 72 aa, chain + ## HITS:1 COG:dsdX KEGG:ns NR:ns ## COG: dsdX COG2610 # Protein_GI_number: 16130297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 72 374 445 445 126 100.0 9e-30 MLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVV ALAGTFLLSFII >gi|299857038|gb|ADWS01000026.1| GENE 29 29703 - 31031 1207 442 aa, chain + ## HITS:1 COG:dsdA KEGG:ns NR:ns ## COG: dsdA COG3048 # Protein_GI_number: 16130298 # Func_class: E Amino acid transport and metabolism # Function: D-serine dehydratase # Organism: Escherichia coli K12 # 1 442 1 442 442 871 100.0 0 MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFA PYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKAR GGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSA RIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDEN SRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVH CFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGF YTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHL VWATGGGMVPEEEMNQYLAKGR >gi|299857038|gb|ADWS01000026.1| GENE 30 31139 - 32677 555 512 aa, chain - ## HITS:1 COG:emrY KEGG:ns NR:ns ## COG: emrY COG0477 # Protein_GI_number: 16130299 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 512 1 512 512 910 99.0 0 MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTISGFLGASTDEGTWVIT SFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMA GPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPILGGYICDNFSWGWIFLINVP MGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVGGLQIMLDKGRDLDWFNSSTIII LTVVSVISLISLVIWESTSENPILDLSLFKSRNFTIGIVSITCAYLFYSGAIVLMPQLLQ ETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNKIDMRLLVTFSFLMYAVCYYWRSVTFM PTIDFTGIILPQFFQGFAVACFFLPLTTISFSGLPDNKFANASSMSNFFRTLSGSVGTSL TMTLWGRRESLHHSQLTATIDQFNPVFNSSSQIMDKYYGSLSGVLNEINNEITQQSLSIS ANEIFRMAAIAFILLTVLVWFAKPPFTAKGIG >gi|299857038|gb|ADWS01000026.1| GENE 31 32677 - 33840 746 387 aa, chain - ## HITS:1 COG:emrK KEGG:ns NR:ns ## COG: emrK COG1566 # Protein_GI_number: 16130300 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 387 1 387 387 710 99.0 0 MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQ VSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSA EVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKAL VMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVV PARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQN ATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTRNEDIAEMPDLASTVTSMPA YTSKALVIDTSPIEKEISNIISHNGQL >gi|299857038|gb|ADWS01000026.1| GENE 32 34256 - 34870 345 204 aa, chain + ## HITS:1 COG:ECs3248 KEGG:ns NR:ns ## COG: ECs3248 COG2197 # Protein_GI_number: 15832502 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 204 1 204 204 392 100.0 1e-109 MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNG IQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGY CYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTYKS RLMEKLECKSLMDLYTFAQRNKIG >gi|299857038|gb|ADWS01000026.1| GENE 33 35529 - 38468 1073 979 aa, chain + ## HITS:1 COG:evgS_2 KEGG:ns NR:ns ## COG: evgS_2 COG0642 # Protein_GI_number: 16130302 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 313 732 1 420 420 840 99.0 0 MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWLDT GNLAFLNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQ TGLNFSPITVSHNIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVFVMQKAP DSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDALVATQLN SRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKW IKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLENQISFR KALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEV TAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAVYICGWQDITETRDLINAL EVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATG QSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPD HYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLVHIDDNHAVIKMTIMDSGSGLSQ EEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEI SQQVATVEAKAEHPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKV SMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLSCGMNLCLF KPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLP AAFQALEAGDNRTFHQCIHRIHGAANILNLQKLINISHQLEITPVSDDSKPEILQLLNSV KEHIAELDQEIAVFCQKND >gi|299857038|gb|ADWS01000026.1| GENE 34 38524 - 39669 466 381 aa, chain - ## HITS:1 COG:yfdE KEGG:ns NR:ns ## COG: yfdE COG1804 # Protein_GI_number: 16130303 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 1 381 14 394 394 796 100.0 0 MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQ SLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEIN PRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYL FSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATGKSPQRLGNRHPYMAPFD VFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKT QAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPH VMPGAATLDQHGEQIRQEFSS >gi|299857038|gb|ADWS01000026.1| GENE 35 39743 - 40687 594 314 aa, chain - ## HITS:1 COG:ECs3252 KEGG:ns NR:ns ## COG: ECs3252 COG0679 # Protein_GI_number: 15832506 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 314 1 314 314 531 100.0 1e-151 MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYALPAALFVSITRANREM IFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPI YGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKKNSNLSALISAAKEPVVWAPV LATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHKFEFSAEIAYNTFLKLIL MPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFV VTAPLWIYVSRLVS >gi|299857038|gb|ADWS01000026.1| GENE 36 40757 - 42451 1073 564 aa, chain - ## HITS:1 COG:ECs3253 KEGG:ns NR:ns ## COG: ECs3253 COG0028 # Protein_GI_number: 15832507 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 564 1 564 564 1079 99.0 0 MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYA AAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEE LDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEA LTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESTQI PFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQ LDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMH EKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTW GVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRG DGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQSRKPTIINV VIDPAAGTESGHITKLNPKQVAGN >gi|299857038|gb|ADWS01000026.1| GENE 37 42505 - 43755 1035 416 aa, chain - ## HITS:1 COG:yfdW KEGG:ns NR:ns ## COG: yfdW COG1804 # Protein_GI_number: 16130306 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 1 416 1 416 416 830 100.0 0 MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYF TMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLI FGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPPLVSAAALGDSNTGMHLLIGL LAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAVP RGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTCKAIGKPEWITDPAYSTAHA RQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVE QPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEHTAAVLQELGYSDDEIAAMKQNHAI >gi|299857038|gb|ADWS01000026.1| GENE 38 44267 - 44899 566 210 aa, chain - ## HITS:1 COG:no KEGG:SDY_2573 NR:ns ## KEGG: SDY_2573 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 210 1 210 210 326 100.0 3e-88 MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAERISEQGLYAMRDVQ VARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISE SYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKL LDKKQYYEANLALKGAEDGIIVDSEALFVN >gi|299857038|gb|ADWS01000026.1| GENE 39 45547 - 45789 291 80 aa, chain - ## HITS:1 COG:no KEGG:SDY_2575 NR:ns ## KEGG: SDY_2575 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 80 1 80 80 111 100.0 7e-24 MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIF MFLAPACGLMIRFMVGYGRR >gi|299857038|gb|ADWS01000026.1| GENE 40 46142 - 47062 857 306 aa, chain + ## HITS:1 COG:ECs3258 KEGG:ns NR:ns ## COG: ECs3258 COG1560 # Protein_GI_number: 15832512 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli O157:H7 # 1 306 23 328 328 625 100.0 1e-179 MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRIGAMARPFLKRRESIAR KNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDSRVRKWFDVEGLDNLKRAQ MQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQLMEWVQTRGRMRSNKAMIGRN NLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVT MVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKIIEKEIMRAPEQYLWIHRRFKTRPVG ESSLYI >gi|299857038|gb|ADWS01000026.1| GENE 41 47554 - 48792 1287 412 aa, chain - ## HITS:1 COG:yfdZ KEGG:ns NR:ns ## COG: yfdZ COG0436 # Protein_GI_number: 16130311 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 412 1 412 412 845 99.0 0 MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCT VAQRPDTHGYSTSRGIPRLRRAISHWYQDRYDVEIDPESEAIVTIGSKEGLAHLMLATLD HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFP SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFF TLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIA EQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSP GIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRADGLLPASSKHIHENAE >gi|299857038|gb|ADWS01000026.1| GENE 42 49187 - 50866 1458 559 aa, chain + ## HITS:1 COG:ECs3260 KEGG:ns NR:ns ## COG: ECs3260 COG3275 # Protein_GI_number: 15832514 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Escherichia coli O157:H7 # 1 559 7 565 565 1123 100.0 0 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG WINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGF IVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAI TNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLW EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQS KINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDY IAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECG NRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEI AFYIPNQRTPVASQATLLL >gi|299857038|gb|ADWS01000026.1| GENE 43 50881 - 51615 772 244 aa, chain + ## HITS:1 COG:ECs3261 KEGG:ns NR:ns ## COG: ECs3261 COG3279 # Protein_GI_number: 15832515 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 483 100.0 1e-136 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ LMHL >gi|299857038|gb|ADWS01000026.1| GENE 44 51628 - 52485 527 285 aa, chain + ## HITS:1 COG:ECs3262 KEGG:ns NR:ns ## COG: ECs3262 COG2207 # Protein_GI_number: 15832516 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 285 1 285 285 575 99.0 1e-164 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG NLLEAKQQRMVEGEMLFIPARAANLPINNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRNVVNMPPGNSQPRGD FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG >gi|299857038|gb|ADWS01000026.1| GENE 45 52488 - 54983 2662 831 aa, chain - ## HITS:1 COG:ECs3263_2 KEGG:ns NR:ns ## COG: ECs3263_2 COG1080 # Protein_GI_number: 15832517 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli O157:H7 # 98 683 1 586 586 1114 99.0 0 MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEVTFINHRQNAKADAKSSLALIGTGTLFN DSCSLNISGSDEEQARRVLEEYIQVRFIDSDSVQPTQAELTAHPLPRSLSRLNPDLLYGN VLASGVGVGTLTLLQSDSLDSYRAIPASVQDSTRLEHSLATLAEQLNQQLRERDGESKTI LSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQVCAKLSASASDYLRERVSDIRD ISEQLLHITWPELKPRNNLVLEKPTILVAEDLTPSQFLSLDLKNLAGMILEKTGRTSHTL ILARASAIPVLSGLPLDAIARYAGQPAVLDAQCGVLAINPNDAVSGYYQVAQTLADKRQK QQAQAAAQLAYSRDNKRIDIAANIGTALEAPGAFANGAEGVGLFRTEMLYMDRDSAPDEQ EQFEAYQQVLLAAGDKPIIFRTMDIGGDKSIPYLNIPQEENPFLGYRAVRIYPEFAGLFR TQLRAILRAASFGNAQLMIPMVHSLDQILWVKGEIQKAIVELKRDGLRHAETITLGIMVE VPSVCYIIDHFCDEVDFFSIGSNDMTQYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTT AHQRGKWVGICGELGGESRYLPLLLGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQ ACECRSAQEIEALLTAFTPEEDVRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEH PFELEEDVWQREEIVTTGVGFGVAIPHTKSQWIRHSSISIARLAKPIDWQSEMGEVELVI MLTLGANEGMNHVKVFSQLARKLVNKNFRQSLFAAQDAQSILTLLETELTF >gi|299857038|gb|ADWS01000026.1| GENE 46 55008 - 56045 888 345 aa, chain - ## HITS:1 COG:ypdE KEGG:ns NR:ns ## COG: ypdE COG1363 # Protein_GI_number: 16130316 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Escherichia coli K12 # 1 345 1 345 345 673 99.0 0 MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGSVLIRLNESTGPKVMIC AHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDV SAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCYLLVTLLRE LHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDTACWAKNFDYSAANHRQIG NGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQADMFSNGGTDGGAVHLTGTGVPTVVM GPATRHGHCAASIADCRDILQMQQLLSALIQRLTRETVVQLTDFR >gi|299857038|gb|ADWS01000026.1| GENE 47 56045 - 57130 1134 361 aa, chain - ## HITS:1 COG:ypdF KEGG:ns NR:ns ## COG: ypdF COG0006 # Protein_GI_number: 16130317 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli K12 # 1 361 1 361 361 702 98.0 0 MTLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGSGYVVISRESAHILVDSRYYVEVE ARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSELNAKLVSAT PDVLRQIKTPEEVEIIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKAS FDTIVASGWRGALPHGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESH PLFDVYQIVLQAQLAAISAIRPGVRCQQIDDAARRVITEAGFGDYFGHNTGHAIGIEVHE DPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTPQGAEVLYAMPKTVLLTGE A >gi|299857038|gb|ADWS01000026.1| GENE 48 57145 - 58392 1477 415 aa, chain - ## HITS:1 COG:ECs3266 KEGG:ns NR:ns ## COG: ECs3266 COG1299 # Protein_GI_number: 15832520 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli O157:H7 # 1 415 1 415 415 702 99.0 0 MAIKKRSATVVPGASGAAAAVKNPQASKSSFWGELPQHVMSGISRMVPTLIMGGVILAFS QLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVAN SIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKW MNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGAL MYAMGIAVATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRR LTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLG AVQWFPESAIWAWPLVTNLGVYMAGIALGAVITALMVVFLRLMMFRKGKLLIDSL >gi|299857038|gb|ADWS01000026.1| GENE 49 58414 - 58740 550 108 aa, chain - ## HITS:1 COG:ECs3267 KEGG:ns NR:ns ## COG: ECs3267 COG1445 # Protein_GI_number: 15832521 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 169 99.0 1e-42 MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATI IIHSVAVTPEDNERFESRDVYEITLQDAIKNAVGIIKEIEEMIASEQQ >gi|299857038|gb|ADWS01000026.1| GENE 50 58959 - 59924 1122 321 aa, chain - ## HITS:1 COG:ECs3268 KEGG:ns NR:ns ## COG: ECs3268 COG0837 # Protein_GI_number: 15832522 # Func_class: G Carbohydrate transport and metabolism # Function: Glucokinase # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 655 99.0 0 MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGC IAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFG GAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFASNSEEEAIILEILRAE IGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALSLFCVI MGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIV HDNPGLLGSGAHLRQTLGHIL >gi|299857038|gb|ADWS01000026.1| GENE 51 60128 - 61384 943 418 aa, chain + ## HITS:1 COG:ECs3269 KEGG:ns NR:ns ## COG: ECs3269 COG0038 # Protein_GI_number: 15832523 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Escherichia coli O157:H7 # 1 418 1 418 418 635 99.0 0 MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASALQNLLWQRLPGTLGIAQDSPLWII GVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPGLIVALILGLAGGVSLGPE HPIMTVNIALAVAIGARLLPRVNRMEWTILASAGTIGALFGTPVAAALIFSQTLNGSSEV PLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQMEMTDILSGAIVAAIAIAAGMVA VWCLPRLHAMMNQMKNPVLVLGIGGFILGILGVIGGPVSLFKGLDEMQQMVANQAFSTSD YFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVALGLMLHEHVPAVPAAITVSCAILGIV LVVTRDGWLSLFMAAVVVPNTTLLPLLCIVMLPAWLLLAGKPMMMVNRPKQQPPHDNV >gi|299857038|gb|ADWS01000026.1| GENE 52 61499 - 61754 245 85 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_2555 NR:ns ## KEGG: ECDH10B_2555 # Name: ypeC # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 85 1 85 108 138 100.0 6e-32 MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYE WRKNRWWRHDNGYHRGWDKRKAYER Prediction of potential genes in microbial genomes Time: Sun May 15 22:32:28 2011 Seq name: gi|299857037|gb|ADWS01000027.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont26.1, whole genome shotgun sequence Length of sequence - 58581 bp Number of predicted genes - 55, with homology - 54 Number of transcription units - 30, operones - 12 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 696 - 733 6.0 2 2 Op 1 41/0.000 - CDS 763 - 2409 2383 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 3 2 Op 2 . - CDS 2453 - 2746 451 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 2866 - 2925 6.0 + Prom 2898 - 2957 2.3 4 3 Tu 1 . + CDS 3022 - 4278 1112 ## COG0531 Amino acid transporters - Term 4241 - 4285 -0.4 5 4 Tu 1 . - CDS 4294 - 4770 365 ## COG3030 Protein affecting phage T7 exclusion by the F plasmid - Prom 4827 - 4886 3.1 + Prom 4890 - 4949 5.7 6 5 Tu 1 . + CDS 5107 - 6543 1686 ## COG1027 Aspartate ammonia-lyase + Term 6567 - 6604 7.1 + Prom 6566 - 6625 3.7 7 6 Tu 1 . + CDS 6661 - 7962 1222 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 7972 - 8003 3.1 8 7 Op 1 7/0.167 + CDS 8078 - 8416 274 ## COG1324 Uncharacterized protein involved in tolerance to divalent cations 9 7 Op 2 3/0.667 + CDS 8392 - 10089 1625 ## COG4232 Thiol:disulfide interchange protein 10 7 Op 3 2/0.667 + CDS 10126 - 10701 707 ## COG1309 Transcriptional regulator + Term 10830 - 10897 30.2 + TRNA 10808 - 10883 84.1 # Phe GAA 0 0 + Prom 11744 - 11803 2.2 11 8 Tu 1 . + CDS 11845 - 13038 636 ## COG3710 DNA-binding winged-HTH domains + Term 13112 - 13145 3.4 12 9 Op 1 10/0.000 + CDS 13403 - 14737 1372 ## COG0531 Amino acid transporters + Term 14753 - 14808 3.0 13 9 Op 2 4/0.333 + CDS 14817 - 16964 2438 ## COG1982 Arginine/lysine/ornithine decarboxylases + Term 16972 - 17015 6.3 14 10 Tu 1 3/0.667 + CDS 17023 - 18480 1304 ## COG3104 Dipeptide/tripeptide permease + Prom 18575 - 18634 5.5 15 11 Tu 1 . + CDS 18717 - 20234 1583 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 20251 - 20286 6.7 - Term 20239 - 20274 6.7 16 12 Op 1 . - CDS 20353 - 20526 175 ## ECH74115_5644 hypothetical protein 17 12 Op 2 . - CDS 20554 - 20850 197 ## ECUMN_4661 hypothetical protein - Prom 20939 - 20998 1.7 + Prom 20801 - 20860 2.9 18 13 Tu 1 . + CDS 20956 - 21147 77 ## gi|293407852|ref|ZP_06651692.1| predicted protein 19 14 Op 1 5/0.167 - CDS 21077 - 21349 333 ## COG2388 Predicted acetyltransferase 20 14 Op 2 . - CDS 21361 - 21591 199 ## COG3592 Uncharacterized conserved protein 21 14 Op 3 . - CDS 21646 - 21780 61 ## EcSMS35_4593 hypothetical protein + Prom 21689 - 21748 2.9 22 15 Op 1 9/0.000 + CDS 21772 - 23403 1503 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism 23 15 Op 2 3/0.667 + CDS 23400 - 24119 278 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 24 16 Op 1 4/0.333 + CDS 24690 - 26030 1449 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 26040 - 26081 6.0 25 16 Op 2 3/0.667 + CDS 26108 - 27754 507 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase + Prom 27795 - 27854 2.5 26 17 Tu 1 . + CDS 27877 - 28506 645 ## COG3647 Predicted membrane protein - Term 28581 - 28622 6.1 27 18 Tu 1 4/0.333 - CDS 28645 - 30054 941 ## COG2211 Na+/melibiose symporter and related transporters 28 19 Tu 1 . - CDS 30169 - 31521 1255 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 29 20 Tu 1 . + CDS 31807 - 32715 814 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 32759 - 32818 7.8 30 21 Tu 1 . + CDS 32914 - 35181 2126 ## COG1982 Arginine/lysine/ornithine decarboxylases + Term 35299 - 35330 1.1 + Prom 35370 - 35429 6.1 31 22 Op 1 . + CDS 35506 - 36267 272 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 36304 - 36363 3.9 32 22 Op 2 . + CDS 36404 - 37741 1458 ## COG0531 Amino acid transporters + Term 37763 - 37810 8.2 33 23 Op 1 3/0.667 + CDS 37845 - 39488 1520 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 34 23 Op 2 40/0.000 + CDS 39485 - 40153 902 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 35 23 Op 3 . + CDS 40163 - 41254 883 ## COG0642 Signal transduction histidine kinase 36 24 Tu 1 . - CDS 41230 - 41319 95 ## - Prom 41341 - 41400 1.6 37 25 Tu 1 . - CDS 41431 - 42933 1695 ## COG0477 Permeases of the major facilitator superfamily - Prom 43063 - 43122 3.2 38 26 Op 1 . - CDS 43197 - 44075 436 ## ECO111_4980 hypothetical protein 39 26 Op 2 . - CDS 44072 - 46300 1602 ## COG0699 Predicted GTPases (dynamin-related) - Prom 46476 - 46535 8.7 40 27 Tu 1 . + CDS 46702 - 47037 457 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism + Prom 47113 - 47172 2.5 41 28 Tu 1 . + CDS 47197 - 47640 509 ## COG2764 Uncharacterized protein conserved in bacteria + Prom 47661 - 47720 4.5 42 29 Op 1 15/0.000 + CDS 47773 - 48561 261 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 43 29 Op 2 8/0.000 + CDS 48586 - 49602 1060 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component 44 29 Op 3 3/0.667 + CDS 49664 - 50443 810 ## COG3639 ABC-type phosphate/phosphonate transport system, permease component 45 29 Op 4 5/0.167 + CDS 50464 - 51189 619 ## COG2188 Transcriptional regulators 46 29 Op 5 9/0.000 + CDS 51190 - 51642 490 ## COG3624 Uncharacterized enzyme of phosphonate metabolism 47 29 Op 6 8/0.000 + CDS 51639 - 52223 636 ## COG3625 Uncharacterized enzyme of phosphonate metabolism 48 29 Op 7 8/0.000 + CDS 52223 - 53287 1137 ## COG3626 Uncharacterized enzyme of phosphonate metabolism 49 29 Op 8 7/0.167 + CDS 53280 - 54125 898 ## COG3627 Uncharacterized enzyme of phosphonate metabolism 50 29 Op 9 7/0.167 + CDS 54122 - 54880 376 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Prom 54892 - 54951 1.9 51 30 Op 1 6/0.167 + CDS 54991 - 55671 223 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 52 30 Op 2 7/0.167 + CDS 55668 - 56804 1080 ## COG3454 Metal-dependent hydrolase involved in phosphonate metabolism 53 30 Op 3 3/0.667 + CDS 56804 - 57361 441 ## COG3709 Uncharacterized component of phosphonate metabolism 54 30 Op 4 3/0.667 + CDS 57348 - 57782 560 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 55 30 Op 5 . + CDS 57784 - 58542 513 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I Predicted protein(s) >gi|299857037|gb|ADWS01000027.1| GENE 1 272 - 625 364 117 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_4377 NR:ns ## KEGG: ECIAI1_4377 # Name: yjeI # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 117 1 117 117 198 100.0 6e-50 MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQ HGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN >gi|299857037|gb|ADWS01000027.1| GENE 2 763 - 2409 2383 548 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 548 1 547 547 922 87 0.0 MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG MGGMGGMM >gi|299857037|gb|ADWS01000027.1| GENE 3 2453 - 2746 451 97 aa, chain - ## HITS:1 COG:ECs5123 KEGG:ns NR:ns ## COG: ECs5123 COG0234 # Protein_GI_number: 15834377 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 158 100.0 2e-39 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVK VGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA >gi|299857037|gb|ADWS01000027.1| GENE 4 3022 - 4278 1112 418 aa, chain + ## HITS:1 COG:yjeH KEGG:ns NR:ns ## COG: yjeH COG0531 # Protein_GI_number: 16131966 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 418 1 418 418 702 100.0 0 MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFA ILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSW QLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGN IELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVL HFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQH NPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCML AGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLLPKRKTPENGITT >gi|299857037|gb|ADWS01000027.1| GENE 5 4294 - 4770 365 158 aa, chain - ## HITS:1 COG:yjeG KEGG:ns NR:ns ## COG: yjeG COG3030 # Protein_GI_number: 16132265 # Func_class: R General function prediction only # Function: Protein affecting phage T7 exclusion by the F plasmid # Organism: Escherichia coli K12 # 1 158 1 158 158 241 100.0 3e-64 MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQ KMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSR MPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD >gi|299857037|gb|ADWS01000027.1| GENE 6 5107 - 6543 1686 478 aa, chain + ## HITS:1 COG:ECs5120 KEGG:ns NR:ns ## COG: ECs5120 COG1027 # Protein_GI_number: 15834374 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Escherichia coli O157:H7 # 1 478 16 493 493 932 100.0 0 MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAM ANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLE LMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSLIKLVDAINQLREGFERKAVE FQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGLN TPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRL LSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQ LNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIG HHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNLMHPAYKAKRYTDESEQ >gi|299857037|gb|ADWS01000027.1| GENE 7 6661 - 7962 1222 433 aa, chain + ## HITS:1 COG:ECs5119 KEGG:ns NR:ns ## COG: ECs5119 COG2704 # Protein_GI_number: 15834373 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 433 1 433 433 705 100.0 0 MLVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGNIPFDVISIIMAVIAAI SAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFAGTGNISLATLPVIAEVAK EQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGHGISYLHLLSVVIPSTLLAVL VMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIEIKSGAKTSVWLFLLGVVGVVIY AIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVICKVDTDNILNSSTFKAGMSACICI LGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLAVIFFFASALLYSQAATAKALMPMALA LNVSPLTAVASFAAVSGLFILPTYPTLVAAVQMDDTGTTRIGKFVFNHPFFIPGTLGVAL AVCFGFVLGSFML >gi|299857037|gb|ADWS01000027.1| GENE 8 8078 - 8416 274 112 aa, chain + ## HITS:1 COG:ECs5118 KEGG:ns NR:ns ## COG: ECs5118 COG1324 # Protein_GI_number: 15834372 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tolerance to divalent cations # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 198 100.0 2e-51 MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEY EVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR >gi|299857037|gb|ADWS01000027.1| GENE 9 8392 - 10089 1625 565 aa, chain + ## HITS:1 COG:dsbD KEGG:ns NR:ns ## COG: dsbD COG4232 # Protein_GI_number: 16131961 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Escherichia coli K12 # 1 565 1 565 565 1092 98.0 0 MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFTFDFQQNQHDLNLTWQIKDGYYL YRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTLPVTINQASAGATLTVSYQ GCADAGFCYPPETKTVPLSEVVANNAASQPVSVSQQEQHTAQLPFSALWALLIGIGIAFT PCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMALTYTALGLVVAAAGLQFQAALQ HPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLI CSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYALGMGLPLMLITVFGNRLLPKSGPWMEQ VKTAFGFVILALPVFLLERVIGDVWGLRLWSALGVAFFGWAFITSLQAKRGWMRVVQIIL LAAALVSVRPLQDWAFGATHTAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWC VACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQ EHPQARVTGFMDAETFSAHLRDRQP >gi|299857037|gb|ADWS01000027.1| GENE 10 10126 - 10701 707 191 aa, chain + ## HITS:1 COG:ECs5116 KEGG:ns NR:ns ## COG: ECs5116 COG1309 # Protein_GI_number: 15834370 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 191 9 199 199 368 99.0 1e-102 MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQI DVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQ QKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILR FARCRQGGALT >gi|299857037|gb|ADWS01000027.1| GENE 11 11845 - 13038 636 397 aa, chain + ## HITS:1 COG:cadC_1 KEGG:ns NR:ns ## COG: cadC_1 COG3710 # Protein_GI_number: 16131959 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Escherichia coli K12 # 1 65 116 180 180 104 98.0 3e-22 MLSSPPPIPEAVPATDSPSHSLNIQNTATPPEQSPVKSKRFTTFWVWFFFLLSLGICVAL VAFSTLDTRLPMSKSRILLNPRDIDINMVNKSCNSWSSPYQLSYAIGVGDLVATSLNTFS TFMVHDKINYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSIKLVDNADGSTMLDKRYVIT NGNQLAIQNDLLESLSKALNQPWPQRMQETLQQILPHRGALLTNFYQAHDYLLHGDDKSL NRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLT AFNLRPGANTLYWIENGIFQTSVPYVVPYLDKFLASE >gi|299857037|gb|ADWS01000027.1| GENE 12 13403 - 14737 1372 444 aa, chain + ## HITS:1 COG:ECs5114 KEGG:ns NR:ns ## COG: ECs5114 COG0531 # Protein_GI_number: 15834368 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 761 100.0 0 MSSAKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWIISIIGAMSLAYVYARL ATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDPVP AGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFDAATYAANWNT ADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVYIAATQ VLSGMYPSSVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRA ANDGNFPKVYGEVDSNGIPKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIAVL LTMLPYFYSCVDLIRFEGVNIRNFVSLICSVLGCVFCFIALMGASSFELAGTFIVSLIIL MFYARKMHERQSHSMDNHTASNAH >gi|299857037|gb|ADWS01000027.1| GENE 13 14817 - 16964 2438 715 aa, chain + ## HITS:1 COG:ECs5113 KEGG:ns NR:ns ## COG: ECs5113 COG1982 # Protein_GI_number: 15834367 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 715 1 715 715 1494 100.0 0 MNVIAILNHMGVYFKEEPIRELHRALERLNFQIVYPNDRDDLLKLIENNARLCGVIFDWD KYNLELCEEISKMNENLPLYAFANTYSTLDVSLNDLRLQISFFEYALGAAEDIANKIKQT TDEYINTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDI SISVSELGSLLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILI DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVH AVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIY ETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA GKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNID NEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIG IDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHH NLPDLMYRAFEVLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINANMILPYPPGVPLVM PGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEESKK >gi|299857037|gb|ADWS01000027.1| GENE 14 17023 - 18480 1304 485 aa, chain + ## HITS:1 COG:yjdL KEGG:ns NR:ns ## COG: yjdL COG3104 # Protein_GI_number: 16131956 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 485 1 485 485 888 99.0 0 MKTPSQPRAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDNHAISLFSAYASLVYVT PILGGWLADRLLGNRTAVIAGALLMTLGHVVLGIDTNSTFSLYLALAIIICGYGLFKSNI SCLLGELYDENDHRRDGGFSLLYAAGNIGSIAAPIACGLAAQWYGWHVGFALAGGGMFIG LLIFLSGHRHFQSTRSMDKKALTSVKFALPVWSWLVVMLCLAPVFFTLLLENDWSGYLLA IVCLIAAQIIARMMVKFPEHRRALWQIVLLMFVGTLFWVLAQQGGSTISLFIDRFVNRQA FNIEVPTALFQSVNAIAVMLAGVVLAWLASPESRGNSTLRVWLKFAFGLLLMACGFMLLA FDARHAAADGQASMGVMISGLALMGFAELFIDPVAIAQITRLKMSGVLTGIYMLATGAVA NWLAGVVAQQTTESQISGMAIAAYQRFFSQMGEWTLACVAIIVVLAFATRFLFSTPTNMI QESND >gi|299857037|gb|ADWS01000027.1| GENE 15 18717 - 20234 1583 505 aa, chain + ## HITS:1 COG:ECs5111 KEGG:ns NR:ns ## COG: ECs5111 COG1190 # Protein_GI_number: 15834365 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Escherichia coli O157:H7 # 1 505 1 505 505 996 99.0 0 MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQE LESLNIEVSVAGRMMTRRIMGKASFVTLQDVGDRIQLYVARDSLPEGVYNDQFKKWDLGD IIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKS RQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRT LAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGI TVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG REIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID RMIMLFTNSHTIRDVILFPAMRPQK >gi|299857037|gb|ADWS01000027.1| GENE 16 20353 - 20526 175 57 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_5644 NR:ns ## KEGG: ECH74115_5644 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 57 1 57 57 68 100.0 6e-11 MALFSKILIFYVIGVNISFVIIWFISHEKTHIRLLSAFLVGITWPMSLPVALLFSLF >gi|299857037|gb|ADWS01000027.1| GENE 17 20554 - 20850 197 98 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_4661 NR:ns ## KEGG: ECUMN_4661 # Name: yjdK # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 98 1 98 98 172 100.0 3e-42 MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTS LAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK >gi|299857037|gb|ADWS01000027.1| GENE 18 20956 - 21147 77 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293407852|ref|ZP_06651692.1| ## NR: gi|293407852|ref|ZP_06651692.1| predicted protein [Escherichia coli B354] # 1 63 1 63 63 110 90.0 3e-23 MTWDKKTRSLPILCASPYPSDALLHHSAESMKNIVTLYSPINCEYHHTPAFYQIRVSQMG IVG >gi|299857037|gb|ADWS01000027.1| GENE 19 21077 - 21349 333 90 aa, chain - ## HITS:1 COG:ECs5109 KEGG:ns NR:ns ## COG: ECs5109 COG2388 # Protein_GI_number: 15834363 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 163 100.0 8e-41 MEIREGHNKFYINDEQGKQIAEIVFVPTGENLAIIEHTDVDESLKGQGIGKQLVAKVVEK MRREKRKIIPLCPFAKHEFDKTREYDDIRS >gi|299857037|gb|ADWS01000027.1| GENE 20 21361 - 21591 199 76 aa, chain - ## HITS:1 COG:ECs5108 KEGG:ns NR:ns ## COG: ECs5108 COG3592 # Protein_GI_number: 15834362 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 76 1 76 76 153 96.0 6e-38 MDQALLDEGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVVTVV KVIDTCPSGALKCRHK >gi|299857037|gb|ADWS01000027.1| GENE 21 21646 - 21780 61 44 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_4593 NR:ns ## KEGG: EcSMS35_4593 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 44 1 44 44 79 100.0 3e-14 MSHQLPCVTNFLSIISDEAGNSKGVRMIGYIGEETLATETASAV >gi|299857037|gb|ADWS01000027.1| GENE 22 21772 - 23403 1503 543 aa, chain + ## HITS:1 COG:ECs5107 KEGG:ns NR:ns ## COG: ECs5107 COG3290 # Protein_GI_number: 15834361 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Escherichia coli O157:H7 # 1 543 1 543 543 1065 99.0 0 MRHSLPYRMLRKRPMKLSTTVILMVSAVLFSVLLVVHLIYFSQISDMTRDGLANKALAMA RTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPF KGDDILKALNGKENVAINRGFLAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQINDSR WSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDD RGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRL LLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHEFMNKLHVILG LLHLKSYKQLEDYILKTANNYQEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSE SLLPDSGSEDQVATLITTLGNLIENALEALGPEPGGEISVTLHYRHGWLHCEVNDDGPGI APDKIDHIFDKGVSTKGSERGVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWDGER SNR >gi|299857037|gb|ADWS01000027.1| GENE 23 23400 - 24119 278 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 2 225 1 222 226 111 36 8e-24 MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQ KENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGW RQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFS TDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ >gi|299857037|gb|ADWS01000027.1| GENE 24 24690 - 26030 1449 446 aa, chain + ## HITS:1 COG:ECs5105 KEGG:ns NR:ns ## COG: ECs5105 COG2704 # Protein_GI_number: 15834359 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 446 1 446 446 743 100.0 0 MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQPGKPPVDVMLVIIAVVA ASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTILCGTGHVVYTILPIIYDV AIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLGNVTFDGRHLEFLDLLAITIP STLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREYVYGDTATLLDKKLPKSNWLAMW IFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMFMLLTGALIIILTKTNPASISKNEV FRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLGEMVKEYPWAYAIVLLLVSKFVNSQAA ALAAIVPVALAIGVDPAYIVASAPACYGYYILPTYPSDLAAIQFDRSGTTHIGRFVINHS FILPGLIGVSVSCVFGWIFAAMYGFL >gi|299857037|gb|ADWS01000027.1| GENE 25 26108 - 27754 507 548 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 69 531 31 482 508 199 32 2e-50 MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEPEALTLLAQQAFHDASF MLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVLPTCQDTGTAIIVGKKGQR VWTGGGDEEALSKGVYNTYIEDNLRYSQNAALDMYKEVNTGTNLPAQIDLYAVDGDEYKF LCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAET NLKTVKLASAHYYDELPTEGNEHGQAFRDVQLEQELLEEAQKLGLGAQFGGKYFAHDIRV IRLPRHGASCPVGMGVSCSADRNIKAKINREGIWIEKLEHNPGQYIPQELRQAGEGEAVK VDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLKELIDAGKELPQYIKDHPIY YAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACHKHGGF YLGSIGGPAAVLAQQSIKHLECVAYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVN KQCANCTK >gi|299857037|gb|ADWS01000027.1| GENE 26 27877 - 28506 645 209 aa, chain + ## HITS:1 COG:ECs5103 KEGG:ns NR:ns ## COG: ECs5103 COG3647 # Protein_GI_number: 15834357 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 396 100.0 1e-110 MTRTLKPLILNTGALALTLILIYTGISAHDKLTWLMEVTPVIIVVPLLLATAKRYPLTPL LYTLIFFHAIILMVGGQYTYAKVPIGFEVQEWLGLSRNPYDKLGHFFQGLVPALVAREIL VRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQGADDFLGTQGDQWDTQSDMF CALLGALTTVIFLARFHCRQLRRFGLITG >gi|299857037|gb|ADWS01000027.1| GENE 27 28645 - 30054 941 469 aa, chain - ## HITS:1 COG:ECs5102 KEGG:ns NR:ns ## COG: ECs5102 COG2211 # Protein_GI_number: 15834356 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 1 469 1 469 469 854 99.0 0 MTTKLSYGLGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGW IVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEGTTQIVFVCVTYILWGMTYTIMD IPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVNYVGGGDRGFGFQMFTL VLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHLTLKAIVALIYKNDQLSCLLGMALAYN VASNIITGFAIYYFSYVIGDADLFPYYLSYAGAANLVTLVFFPRLVKSLSRRILWAGASI LPVLSCGVLLLMALMSYHNVVLIVIAGILLNVGTALFWVLQVIMVADTVDYGEYKLHVRC ESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSTQALLGMQFIMIALPTLFFMV TLILYFRFYRLNGDTLRRIQIHLLDKYRKVPPEPVHADIPVGAVSDVKA >gi|299857037|gb|ADWS01000027.1| GENE 28 30169 - 31521 1255 450 aa, chain - ## HITS:1 COG:ECs5101 KEGG:ns NR:ns ## COG: ECs5101 COG1486 # Protein_GI_number: 15834355 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 # 1 450 2 451 451 955 99.0 0 MTAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAG ASGKITCHTQQKEALQDADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIM RALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAE ELARDLNIDPATLRYRCAGINHMAFYLELERKTADGSYVNLYPELLAAYEAGQAPKPNIH GNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIERYKVPLDEYPKRCVE QLANWHKELEEYKNASRIDIKPSREYASTIMNAIWTGEPSVIYGNVRNDGLIDNLPQGCC VEVACLVDANGIQPTKVGTLPSHLAALMQTNINVQTLLTEAILTENRDRVYHAAMMDPHT AAVLGIDEIYALVDDLIAAHGDWLPGWLHR >gi|299857037|gb|ADWS01000027.1| GENE 29 31807 - 32715 814 302 aa, chain + ## HITS:1 COG:melR KEGG:ns NR:ns ## COG: melR COG2207 # Protein_GI_number: 16131944 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 302 1 302 302 610 100.0 1e-174 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF PG >gi|299857037|gb|ADWS01000027.1| GENE 30 32914 - 35181 2126 755 aa, chain + ## HITS:1 COG:adiA KEGG:ns NR:ns ## COG: adiA COG1982 # Protein_GI_number: 16131943 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli K12 # 1 755 2 756 756 1601 99.0 0 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFS YQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMDRDLLELVDEFAWILEDTA DFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDY YGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQA CMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKIS ESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY ADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHAT TSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWN KEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILA PGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCS FKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPM AEITPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSY LRSLQSWDHHFPGFEHETEGTEIIDGIYHVMCVKA >gi|299857037|gb|ADWS01000027.1| GENE 31 35506 - 36267 272 253 aa, chain + ## HITS:1 COG:ECs5098 KEGG:ns NR:ns ## COG: ECs5098 COG2207 # Protein_GI_number: 15834352 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 493 100.0 1e-139 MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISH DIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRA LLFTVLSRFLDSKKFLSLMMYMLRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLK KKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTP LHYVSQHRERTVA >gi|299857037|gb|ADWS01000027.1| GENE 32 36404 - 37741 1458 445 aa, chain + ## HITS:1 COG:ECs5097 KEGG:ns NR:ns ## COG: ECs5097 COG0531 # Protein_GI_number: 15834351 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 445 1 445 445 780 100.0 0 MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVY AKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA AWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV LSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQT AKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIF TLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVI TAMYALNYNRLHKNPYPLDAPISKD >gi|299857037|gb|ADWS01000027.1| GENE 33 37845 - 39488 1520 547 aa, chain + ## HITS:1 COG:ZyjdB KEGG:ns NR:ns ## COG: ZyjdB COG2194 # Protein_GI_number: 15804706 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli O157:H7 EDL933 # 1 547 11 557 557 1080 99.0 0 MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDSLHNVLVFLSMPVVAFS VINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDRSMIANIIDTTPAESYALM TPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGANILVSVLLILLVAALFYKDYA SLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVRIGEDAHRNPLMQNEKRKNLTIL IVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTASCGTATAVSVPCMFSDMPREHYKE ELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACDRVPHQNVTALNLPGQCINGECYDEVL FHGLEEYINNLQGDGVIVLHTIGSHGPTYYNRYPPQFRKFTPTCDTNEIQTCSKEQLVNT YDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGLPYAIAPDSQK QVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQ TCRRVSE >gi|299857037|gb|ADWS01000027.1| GENE 34 39485 - 40153 902 222 aa, chain + ## HITS:1 COG:ECs5095 KEGG:ns NR:ns ## COG: ECs5095 COG0745 # Protein_GI_number: 15834349 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 432 100.0 1e-121 MKILIVEDDTLLLQGLILAAQTEGYACDGVTTARMAEQSLEAGHYSLVVLDLGLPDEDGL HFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRRHN NQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSRLMLKAGSPVHREILYNDIYN WDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVANEEN >gi|299857037|gb|ADWS01000027.1| GENE 35 40163 - 41254 883 363 aa, chain + ## HITS:1 COG:ECs5094 KEGG:ns NR:ns ## COG: ECs5094 COG0642 # Protein_GI_number: 15834348 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 363 1 363 363 677 99.0 0 MHFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQIQLFEQALRDNRNNDRHIMR EIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQKELEARTADNLTPIAIHSATL EIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKTHHIDVAPLV ARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPE SAADITVQGDATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDGGAVMAVEDEGPGIDESK CGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAWVRLKKDQNVA NQI >gi|299857037|gb|ADWS01000027.1| GENE 36 41230 - 41319 95 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNRVYESLTTVFSVLVVSSFLYIWFATF >gi|299857037|gb|ADWS01000027.1| GENE 37 41431 - 42933 1695 500 aa, chain - ## HITS:1 COG:ECs5093 KEGG:ns NR:ns ## COG: ECs5093 COG0477 # Protein_GI_number: 15834347 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 500 1 500 500 973 99.0 0 MLKRKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGAD PSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYD TIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGA GVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDRE GLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLI IIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVALFVLAIPAFILINSNVIGLIFAGLLM LAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESSQNLMMP AYYLMVVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHYDNIEQKIDNIDHE IADLQAKRTRLVQQHPRIDE >gi|299857037|gb|ADWS01000027.1| GENE 38 43197 - 44075 436 292 aa, chain - ## HITS:1 COG:no KEGG:ECO111_4980 NR:ns ## KEGG: ECO111_4980 # Name: yjcZ # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 292 1 292 292 560 98.0 1e-158 MTKTLLDGPGRVLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNG GMLNAPLSLRLTMVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALY EWFSARCRWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAF GDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTIPTGGDHADFL SWLGKWTTADKQPVCWSVTQRWQTVALGMPRLCSAQRLAGAMVEEIFSVNLA >gi|299857037|gb|ADWS01000027.1| GENE 39 44072 - 46300 1602 742 aa, chain - ## HITS:1 COG:ZyjdA_1 KEGG:ns NR:ns ## COG: ZyjdA_1 COG0699 # Protein_GI_number: 15804701 # Func_class: R General function prediction only # Function: Predicted GTPases (dynamin-related) # Organism: Escherichia coli O157:H7 EDL933 # 1 275 1 275 275 511 99.0 1e-144 MYTQTLYELSQEAERLLQLSRQQLQLLEKMSLSVPGDDAPQLALPWSQPNIAERHAMLNN ELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVL HFSHVAPIDCLIQQLQQRLRDCDIKHLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPI FHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGP NEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFD QQDRNSDDADQVRALISGTLMKGCITPQQIFPVSSMWGYLANRARHELANNGKLPAPEQQ RWVEDFAHAALGRRWRHDDLADLEHIRHAADQLWEDSLFAQPIQALLHAAYANASLYALR SAAHKLLNYAQQARGYLDFRAHGLNVACEQLRQNIHQVEESLQLLQLNQAQVSGEVKHEI ELALTSANHFLRQQQDALNAQLAALFQDDSEPLSEIRTCCETLLQTAQNTISRDFTLRFA ELESTLCRVLTDVIRPIEQQVKMELSESGFRPGFHFPVFHGVVPHFNTRQLFSEVISRQD ATDEQSTRLGVVRETFSRWLNQPDWGRGNEKSPTETVDYSVLQRALSAEVDLYCQQMAKV LAEQVDESVTAGMNTFFAEFASCLTELQTRLRESLALRQQNESVVRLMQQQLQQTVMTHG WIYTDAQLLRDDIQTLFTAERY >gi|299857037|gb|ADWS01000027.1| GENE 40 46702 - 47037 457 111 aa, chain + ## HITS:1 COG:ECs5090 KEGG:ns NR:ns ## COG: ECs5090 COG2824 # Protein_GI_number: 15834344 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 216 100.0 8e-57 MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDAEPAQESDELIVKDANGNLLADGDSVTI IKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN >gi|299857037|gb|ADWS01000027.1| GENE 41 47197 - 47640 509 147 aa, chain + ## HITS:1 COG:phnB KEGG:ns NR:ns ## COG: phnB COG2764 # Protein_GI_number: 16131933 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 147 1 147 147 295 99.0 3e-80 MPLSPYLSFAGNCADAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIA HANVRIAGSDIMMSDAMPSGKASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETF WAHGFGKVTDKFGVPWMINVVKQQPTQ >gi|299857037|gb|ADWS01000027.1| GENE 42 47773 - 48561 261 262 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 231 1 214 305 105 31 8e-22 MQTIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSA GSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRT CFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPI ASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQF DNERFDHLYRSINRIEENAKAA >gi|299857037|gb|ADWS01000027.1| GENE 43 48586 - 49602 1060 338 aa, chain + ## HITS:1 COG:phnD KEGG:ns NR:ns ## COG: phnD COG3221 # Protein_GI_number: 16131931 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 338 1 338 338 642 100.0 0 MNAKIIASLAFTSMFSLSTLLSPAHAEEQEKALNFGIISTESQQNLKPQWTPFLQDMEKK LGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRANGQVFAQTVAADGSPGYW SVLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVPGYYVFAKNNISASDFKRTVN AGHETNALAVANKQVDVATNNTENLDKLKTSAPEKLKELKVIWKSPLIPGDPIVWRKNLS ETTKDKIYDFFMNYGKTPEEKAVLERLGWAPFRASSDLQLVPIRQLALFKEMQGVKSNKG LNEQDKLAKTTEIQAQLDDLDRLNNALSAMSSVSKAVQ >gi|299857037|gb|ADWS01000027.1| GENE 44 49664 - 50443 810 259 aa, chain + ## HITS:1 COG:ECs5086 KEGG:ns NR:ns ## COG: ECs5086 COG3639 # Protein_GI_number: 15834340 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 259 18 276 276 462 99.0 1e-130 MQTITIAPSKRSWFSLLSWAVVLAVLVVSWQGAEMAPLTLIKDGGNMATFAADFFPPDFS QWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWWVYQPVRRLMDACRAINEM VFAMLFVVAVGLGPFAGVLALFIHTTGVLSKLLSEAVEAIEPGPVEGIRATGANKLEEIL YGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIGVTLWEAIRGFQFQQTCALMVLI IVTVSLLDFLSQRLRKHFI >gi|299857037|gb|ADWS01000027.1| GENE 45 50464 - 51189 619 241 aa, chain + ## HITS:1 COG:phnF KEGG:ns NR:ns ## COG: phnF COG2188 # Protein_GI_number: 16131928 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 241 1 241 241 468 100.0 1e-132 MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAARFEVNRHTLRRAIDQLV EKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPTSEKLLSVLRPASGHVADA LGITEGENVIHLRTLRRVNGVALCLIDHYFADLTLWPTLQRFDSGSLHDFLREQTGIALR RSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDGESSPAEYSVSLTRADMIEFTME H >gi|299857037|gb|ADWS01000027.1| GENE 46 51190 - 51642 490 150 aa, chain + ## HITS:1 COG:ECs5084 KEGG:ns NR:ns ## COG: ECs5084 COG3624 # Protein_GI_number: 15834338 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 258 97.0 3e-69 MHADTATRQHWMSVLAHSQPAELAARLKALNITADYEVIRAAETGLVQIQARMGGTGERF FAGDATLTRAAVRLTDGTLGYSWVLGRDKQHAERCALIDALMQQSRYFQNLSETLIAPLD ADRMARIAARQAEVNASRVDFFTMVRGDNA >gi|299857037|gb|ADWS01000027.1| GENE 47 51639 - 52223 636 194 aa, chain + ## HITS:1 COG:ECs5083 KEGG:ns NR:ns ## COG: ECs5083 COG3625 # Protein_GI_number: 15834337 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 194 1 194 194 350 99.0 8e-97 MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDT PVWLAAPLSNDIVSQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAG ATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHELTERPHPFPLGIDLILTCGE RLLAIPRTTHVEVC >gi|299857037|gb|ADWS01000027.1| GENE 48 52223 - 53287 1137 354 aa, chain + ## HITS:1 COG:ECs5082 KEGG:ns NR:ns ## COG: ECs5082 COG3626 # Protein_GI_number: 15834336 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 354 1 354 354 678 98.0 0 MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELA ALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTEMRLERRISAVYKDIPGGQLLGP TYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLVKFEKDSGAQPDDITR TPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIVPEELG FAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYG EHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEKNHG >gi|299857037|gb|ADWS01000027.1| GENE 49 53280 - 54125 898 281 aa, chain + ## HITS:1 COG:ECs5081 KEGG:ns NR:ns ## COG: ECs5081 COG3627 # Protein_GI_number: 15834335 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 281 1 281 281 572 99.0 1e-163 MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVI GESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATLIQTRHRIPETPLTEDQI IIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGR YVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP CAICGSTHSYLDEVALDDAGNRMFVCSDTDYCRQQSEAKSQ >gi|299857037|gb|ADWS01000027.1| GENE 50 54122 - 54880 376 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 19 251 36 267 329 149 35 4e-35 MNKPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQQG EIHYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGERLMATGARHYGD IRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMDEPTGGLDVSV QARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLTDRVLDDPHHP YTQLLVSSVLQN >gi|299857037|gb|ADWS01000027.1| GENE 51 54991 - 55671 223 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 219 1 209 245 90 29 2e-17 MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLP DEGQIQIKHGDEWVDLVTAPARKVVEIRKTTIGWVSQFLRVIPRISALEVVMQPLLDTGV PREACAAKAARLLTRLNVPERLWHQAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASL DAKNSAAVVELIHEAKARGAAIVGIFHDEAVRNDVADRLHPMGASS >gi|299857037|gb|ADWS01000027.1| GENE 52 55668 - 56804 1080 378 aa, chain + ## HITS:1 COG:ECs5078 KEGG:ns NR:ns ## COG: ECs5078 COG3454 # Protein_GI_number: 15834332 # Func_class: P Inorganic ion transport and metabolism # Function: Metal-dependent hydrolase involved in phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 729 97.0 0 MIINNVKLVLENEVVHGSLEVQDGEIRAFAESQSRLPEAMDGEGGWLLPGLIELHTDNLD KFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINTIEE TQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLVSLMDHSPGQRQFANREKYRE YYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAALCHARQIALASHDDATHAHVAES HQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVRGGSHSGNVAASELAQLGLLDILSS DYYPASLLDAAFRVADDESNRFTLPQAVRLVTKNPAQALNLQDRGVIGEGKRADLVLAHR QGNHIHIDHVWRQGKRVF >gi|299857037|gb|ADWS01000027.1| GENE 53 56804 - 57361 441 185 aa, chain + ## HITS:1 COG:phnN KEGG:ns NR:ns ## COG: phnN COG3709 # Protein_GI_number: 16131920 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized component of phosphonate metabolism # Organism: Escherichia coli K12 # 1 185 1 185 185 356 98.0 2e-98 MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASAGSENHIALSEREFFTR AGQNLLALSWHANGLYYGVGIEIDLWLHAGFDVVVNGSRAHLPQARARYQSALLPVCLQV SPEILRQRLENRGRENASEINARLARAARYTPQDCHTLNNDGSLRQSVDTLLTLIHQKEK HHACL >gi|299857037|gb|ADWS01000027.1| GENE 54 57348 - 57782 560 144 aa, chain + ## HITS:1 COG:phnO KEGG:ns NR:ns ## COG: phnO COG0454 # Protein_GI_number: 16131919 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 144 1 144 144 285 100.0 2e-77 MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRDPNMRYHLALLDGEVVG MIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVK RHDAHRFYLREGYEQSHFRFTKAL >gi|299857037|gb|ADWS01000027.1| GENE 55 57784 - 58542 513 252 aa, chain + ## HITS:1 COG:ECs5075 KEGG:ns NR:ns ## COG: ECs5075 COG1235 # Protein_GI_number: 15834329 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 509 95.0 1e-144 MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGRHDL TDRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDVIPVYGPPDEQGCDDLFKHPGLLDFS HTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGLPEKTLKFLLNNH PQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQFDAWLMENALPSGF EVGFDGMEIGVA Prediction of potential genes in microbial genomes Time: Sun May 15 22:33:09 2011 Seq name: gi|299857036|gb|ADWS01000028.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont27.1, whole genome shotgun sequence Length of sequence - 58119 bp Number of predicted genes - 54, with homology - 54 Number of transcription units - 22, operones - 10 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 3/0.636 - CDS 1 - 1105 919 ## COG3501 Uncharacterized protein conserved in bacteria 2 1 Op 2 1/0.818 - CDS 1117 - 3762 1297 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Term 3912 - 3945 5.4 3 2 Op 1 1/0.818 - CDS 3953 - 4444 678 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 4 2 Op 2 1/0.818 - CDS 4502 - 6154 1160 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 5 2 Op 3 8/0.000 - CDS 6167 - 6832 571 ## COG3455 Uncharacterized protein conserved in bacteria 6 2 Op 4 1/0.818 - CDS 6829 - 8166 1030 ## COG3522 Uncharacterized protein conserved in bacteria 7 2 Op 5 6/0.000 - CDS 8184 - 9722 1515 ## COG3517 Uncharacterized protein conserved in bacteria 8 2 Op 6 . - CDS 9781 - 10281 503 ## COG3516 Uncharacterized protein conserved in bacteria - Prom 10371 - 10430 6.6 - TRNA 10916 - 10992 86.1 # Met CAT 0 0 - TRNA 11026 - 11102 86.1 # Met CAT 0 0 - TRNA 11136 - 11212 86.1 # Met CAT 0 0 + Prom 11332 - 11391 4.2 9 3 Op 1 . + CDS 11421 - 12518 1193 ## COG2821 Membrane-bound lytic murein transglycosylase + Term 12555 - 12588 4.1 10 3 Op 2 1/0.818 + CDS 12595 - 13068 313 ## COG2071 Predicted glutamine amidotransferases 11 3 Op 3 4/0.273 + CDS 13095 - 13652 536 ## COG1396 Predicted transcriptional regulators 12 4 Op 1 6/0.000 + CDS 13927 - 15414 1632 ## COG1012 NAD-dependent aldehyde dehydrogenases 13 4 Op 2 4/0.273 + CDS 15416 - 16696 1508 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 14 4 Op 3 . + CDS 16734 - 17999 1240 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases + Term 18206 - 18241 3.1 - Term 17843 - 17871 -1.0 15 5 Tu 1 . - CDS 18119 - 19096 792 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Prom 19199 - 19258 3.7 + Prom 19072 - 19131 3.8 16 6 Op 1 . + CDS 19263 - 19931 1015 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription 17 6 Op 2 . + CDS 19985 - 20209 300 ## ECDH10B_1422 phage shock protein B 18 6 Op 3 . + CDS 20209 - 20568 527 ## COG1983 Putative stress-responsive transcriptional regulator 19 6 Op 4 . + CDS 20577 - 20798 222 ## ECDH10B_1424 peripheral inner membrane phage-shock protein 20 6 Op 5 1/0.818 + CDS 20873 - 21187 434 ## COG0607 Rhodanese-related sulfurtransferase + Term 21201 - 21234 3.6 + Prom 21207 - 21266 3.9 21 7 Op 1 7/0.000 + CDS 21372 - 22148 549 ## COG0366 Glycosidases 22 7 Op 2 2/0.727 + CDS 22196 - 23077 528 ## COG0366 Glycosidases 23 7 Op 3 35/0.000 + CDS 23091 - 24383 1599 ## COG1653 ABC-type sugar transport system, periplasmic component 24 7 Op 4 38/0.000 + CDS 24404 - 25285 963 ## COG1175 ABC-type sugar transport systems, permease components 25 7 Op 5 5/0.091 + CDS 25272 - 26114 901 ## COG0395 ABC-type sugar transport system, permease component 26 7 Op 6 3/0.636 + CDS 26145 - 27197 1269 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 27 7 Op 7 16/0.000 + CDS 27215 - 28003 960 ## COG1082 Sugar phosphate isomerases/epimerases 28 7 Op 8 4/0.273 + CDS 28025 - 29068 801 ## COG0673 Predicted dehydrogenases and related proteins 29 7 Op 9 11/0.000 + CDS 29134 - 31332 1399 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) 30 7 Op 10 3/0.636 + CDS 31329 - 31988 597 ## COG0637 Predicted phosphatase/phosphohexomutase 31 7 Op 11 . + CDS 32002 - 33084 1049 ## COG3839 ABC-type sugar transport systems, ATPase components 32 7 Op 12 . + CDS 33129 - 34034 952 ## B21_01307 hypothetical protein - Term 34074 - 34127 5.5 33 8 Tu 1 . - CDS 34145 - 35143 808 ## COG1609 Transcriptional regulators - Prom 35172 - 35231 3.8 + Prom 35072 - 35131 2.2 34 9 Op 1 9/0.000 + CDS 35298 - 36695 1192 ## COG3106 Predicted ATPase 35 9 Op 2 5/0.091 + CDS 36692 - 37753 1120 ## COG3768 Predicted membrane protein + Term 37806 - 37848 1.9 + Prom 37813 - 37872 6.5 36 10 Tu 1 . + CDS 37901 - 39442 1412 ## COG3283 Transcriptional regulator of aromatic amino acids metabolism + Term 39452 - 39490 10.2 - Term 39431 - 39484 11.2 37 11 Tu 1 . - CDS 39486 - 39992 692 ## COG2077 Peroxiredoxin - Prom 40021 - 40080 2.3 + Prom 39989 - 40048 4.3 38 12 Tu 1 . + CDS 40111 - 41076 941 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 39 13 Op 1 1/0.818 - CDS 41051 - 41779 352 ## COG2866 Predicted carboxypeptidase 40 13 Op 2 1/0.818 - CDS 41861 - 42043 145 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 41 13 Op 3 . - CDS 42114 - 43031 1074 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 43100 - 43159 2.4 + Prom 42975 - 43034 3.2 42 14 Tu 1 . + CDS 43172 - 44071 266 ## COG0583 Transcriptional regulator + Term 44212 - 44240 -0.9 43 15 Tu 1 . + CDS 44408 - 46021 1432 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 46033 - 46075 -0.6 - Term 45836 - 45870 0.3 44 16 Tu 1 . - CDS 46072 - 47103 773 ## COG0668 Small-conductance mechanosensitive channel - Prom 47233 - 47292 4.3 + Prom 47059 - 47118 4.8 45 17 Tu 1 . + CDS 47347 - 47604 301 ## ECSP_1858 predicted inner membrane protein + Term 47615 - 47644 2.8 - Term 47602 - 47632 3.0 46 18 Op 1 7/0.000 - CDS 47654 - 48604 991 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 48642 - 48701 3.7 - Term 48674 - 48734 10.1 47 18 Op 2 4/0.273 - CDS 48756 - 49508 850 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 49534 - 49593 6.2 48 19 Op 1 2/0.727 - CDS 49703 - 50218 281 ## COG0350 Methylated DNA-protein cysteine methyltransferase 49 19 Op 2 4/0.273 - CDS 50229 - 51755 1092 ## COG2978 Putative p-aminobenzoyl-glutamate transporter 50 19 Op 3 3/0.636 - CDS 51792 - 53237 1018 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 51 19 Op 4 . - CDS 53237 - 54547 987 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 54611 - 54670 2.3 + Prom 54560 - 54619 2.3 52 20 Tu 1 . + CDS 54723 - 55631 651 ## COG0583 Transcriptional regulator + Term 55877 - 55913 -0.4 + Prom 55805 - 55864 4.7 53 21 Tu 1 . + CDS 55961 - 56524 589 ## COG2840 Uncharacterized protein conserved in bacteria 54 22 Tu 1 . - CDS 56545 - 57777 914 ## COG2199 FOG: GGDEF domain - Prom 57990 - 58049 3.1 Predicted protein(s) >gi|299857036|gb|ADWS01000028.1| GENE 1 1 - 1105 919 368 aa, chain - ## HITS:1 COG:YPO0970_1 KEGG:ns NR:ns ## COG: YPO0970_1 COG3501 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 6 368 10 376 571 443 61.0 1e-124 MGIQNFDHSHHKLKIRGLQSPVDVLTFTGREQLSASFRYDIEFTSTDKAITPESVLMQDG ALSLTAPPVQGMPVQAPLRTLYGVITGFKHLSSSQDEARYEVRLEPRMALLTRSRQNAIY QNLTVPQIVEKILRERHQMRGQDFVFNLKSEYPAREQVMQYGEDDLTFVSRLLSEVGIWF RFATDARLKIEVIEFYDDQSGYERGLTLPLRHPSGLFDGETEAVWGLNTAYSVVEKSVTT RDYNYRTATAEMMTEQHDATGGDNTTYGEAYHYADNFLQKGDKEAAESGAFYARIRHERY LNEQAILQGQSTSSLLMPGLEIRVQGDDAPAVFRKGVLITGVTASAARDRSYELTFTAIP YSERYGYR >gi|299857036|gb|ADWS01000028.1| GENE 2 1117 - 3762 1297 881 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 12 870 5 805 815 504 35 1e-142 MTGNHPAALLRRLNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRY EWDIDTLWQSLLAHLDTLPRSVRERPQLSEPLTALIRQAWLIASLEGDDPQIRSQHLLMA LTEKPMLPACNDLWVLLSLSRVQLERLRPLLDAQSDECPARQPQVTEPLTSAQPEAATTD APAKTLTGKQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPI LVGEPGVGKTALVEGLALRIAEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVI DAVQKSPEPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYF ERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAQHHGVHMLDSAIQTAVRLSRRYLTG RQLPDKAVDLLDTAGARVRMSLDTLPEPLTQLQARLTALDIEREAIEQDSVFYPETSPER LAELTDLRDELQAEAGHLEAQYQQEKRLAQQIMALRQEGADSTDLQQQLRTHQGFAPLLA LDVDARAVATVVADWTGIPLSSLLRDEQSDLLSMEQSLENRVVGQSPALCAIAQRLRAAK TGLTPENGPQGVFLLTGPSGTGKTETALTLADTLFGGEKSLITINLSEYQEPHTVSQLKG SPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREID FRNTVILMTANLGSDHIMQLLEEKPDATDADLHELLYPLLRDHFQPALMARFQTVIYRPL GQEAMRTIVEMKLAQVVRRLRQHYGLETEINDSLYDALTAACLLPDTGARNIDSLLNQQI LPVLSQQLLAQQAAHRKPAQLQLGWDEEDGIVLEFTTEEMQ >gi|299857036|gb|ADWS01000028.1| GENE 3 3953 - 4444 678 163 aa, chain - ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 163 1 163 163 281 83.0 3e-76 MAIPAYLWLKDDGGADIKGSVDVQGREGSIEVVALDHDVYIPTDNNTGKLTGTRTHKPFI FTKEIDASSPYLYKAVTTGQTLKTAEFKFYRINDAGQEVEYFNITLDNVKLVRVAPLMHD IKEPSKEKHNHLERIEFRYEKITWTYKDGNIIHSDSWNERPSA >gi|299857036|gb|ADWS01000028.1| GENE 4 4502 - 6154 1160 550 aa, chain - ## HITS:1 COG:YPO0974_2 KEGG:ns NR:ns ## COG: YPO0974_2 COG2885 # Protein_GI_number: 16121278 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Yersinia pestis # 430 550 1 123 139 172 69.0 1e-42 MRNTLKQAVVLWGMVLLLVLWSVFISPSGVLRWAGAAAIVLAVAALLIYRRRQAWTEMTG DAGLSSLPPETYRQPVVLVCGDMSAHLFTDSPVRQVSEGLYLHVPDEEQLVAQVERLLTL RPAWASQLAVAYTVMPGMYRDAAVLTGRLRRFAHSMATVRRRAGVNVPWLLWSGLSGSPL PERANSPWFICTGGEIHVATSAETASPAQWLTQTSTQERSQQLCYLLKAESLMQWLNLNM LAALNGPETKCPPLAMAVGLVPSLPAVDNNLWQLWITARTGLTTDIADTGTDATLPFPDA LLRRLPRQSGFTPLRRACVTMLGITTVAGIAALCLSATENRQLLRHIGDDLHQFYAVPAE EFITKARRLSVLKDDAIMLDGYYREGEPLRLGLGLYPGEQIRQPVLRAIRDWRPPEQKME VTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGYTDATGDE KSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNRRVEISLV PRSDACQDVK >gi|299857036|gb|ADWS01000028.1| GENE 5 6167 - 6832 571 221 aa, chain - ## HITS:1 COG:YPO0975 KEGG:ns NR:ns ## COG: YPO0975 COG3455 # Protein_GI_number: 16121279 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 8 218 13 226 228 199 50.0 3e-51 MKKETDINIDALLRDTFLTVVELRQGTTVRHGMELYRHCQRQVEGVRERLKDAGFSRESV EHITYAQCALLDETVLSRSGMDDGQAIWMKDPLQSHFFNTLQAGELLYERMKQVLQEPAP AQAVLTCFHRVLLLGFRGRYQDPVAPERDQLISTLNGLVAPFGVLPETAVLNVPLSTRQH PLLHSPFFWLVTLTLLLAGVWWGLHHWLNVLVDELLPQSLR >gi|299857036|gb|ADWS01000028.1| GENE 6 6829 - 8166 1030 445 aa, chain - ## HITS:1 COG:YPO0976 KEGG:ns NR:ns ## COG: YPO0976 COG3522 # Protein_GI_number: 16121280 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 444 1 449 450 520 59.0 1e-147 MKIHRPLWAEGTFLSSQQFQQQARWEAFSNDSIAQLCIRHPWGIANVLFDRDALMSGKLK TQAVRLRFADGTLIDSDVSDVLPLACDLHALTNDSAVVLLALPLAHGNGGNLGQGEQTER PLRYRQEWQKVQDIYGSDSEDMAVERHALSLRFAHDNNQDYITCPLARLVRDVQGNWTQD EGYIPPLLAFNAHDGLVQRLDTLLLQLRAKCQRLMAMRRESNQRMADFAVADVSLFWLLN ALNSAEPVLSDFLRYPAVHPELVWRELARLAGALLTFSLEHNVSAVPPYVHESPSTVFPP LFSLLSELLEASLPSRVIALDLGSLPGNRWKADLHDPRLREEADFYLSVRSSLPAHQVLH QLPLVCKIGAPDDVTLLINVALNGVPLVPLTSVPAALPLRLENQYFALDMHSDAAKSMLE SGCCMIYTPGTMGDLKPELFAVLRT >gi|299857036|gb|ADWS01000028.1| GENE 7 8184 - 9722 1515 512 aa, chain - ## HITS:1 COG:YPO1466 KEGG:ns NR:ns ## COG: YPO1466 COG3517 # Protein_GI_number: 16121741 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 512 3 516 516 864 79.0 0 MSVQQEHATSETATLTTTESGGVYQSLFDKINLTPVSSIQEIDLWQNSETLADASPDERV TAAIHVLLSCLAKSGENVVKLDKSLLDFHIDDLDQKISKQLDAVMHHPEFQKVESLWRGT WFVVQRTDFRKNVRIELLDISKEHLRQDFDDSPEIIQSGLYRHTYIQEYDTPGGEPVASL ISSYEFDNSPQDIALLRNISRVSAASHMPFIGSVGPKFFLKNSMEEVAAIKDIGNYFDRA EYIKWKSFRDTDDSRYVGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTNAS FAFAANMVKSFVNNGWCVQIRGPQAGGAVADLPIHLYDLGTGNQVKIPSEVMIPETREFE FSNLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIAHYL KIIQRENIGTTKDRRVLELELNTWIRTLVTEMTDPGDELQASHPLRDGKVIVEDIEDNPG FFRVRLFAVPHFQIEGMDINLSLVSQMPKAKA >gi|299857036|gb|ADWS01000028.1| GENE 8 9781 - 10281 503 166 aa, chain - ## HITS:1 COG:YPO1465 KEGG:ns NR:ns ## COG: YPO1465 COG3516 # Protein_GI_number: 16121740 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 164 3 165 166 213 73.0 1e-55 MADSFQNEVPAARVNIKLDLHTGNAKKKVELPLKLLAVGDYSNGKEQRPLSERDKIDINK NNFNSVMAEFSPAVNLTVEDTLSGSGNEQNIALEFKSLKDFEPEQVAKNIPQLRVLLAMR NLLRDLKSNLLDNATFRRELENILKDPTLSSELRDELAKIAPQENV >gi|299857036|gb|ADWS01000028.1| GENE 9 11421 - 12518 1193 365 aa, chain + ## HITS:1 COG:ECs3673 KEGG:ns NR:ns ## COG: ECs3673 COG2821 # Protein_GI_number: 15832927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Escherichia coli O157:H7 # 1 365 1 365 365 740 100.0 0 MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLVNQPDAVGAPINAGDFA EQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGIDAWQMEGADNYGNVQFTG YYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGALSDKYILAYSNSLMDNFIMD VQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDRGEVKKEDMSMQAIRHWGETHSE AEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRASVASDRSIIPPGTTLLAEVPLLDN NGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIGPEAGHRAGWYNHYGRVWVLKTAPGAG NVFSG >gi|299857036|gb|ADWS01000028.1| GENE 10 12595 - 13068 313 157 aa, chain + ## HITS:1 COG:ycjL KEGG:ns NR:ns ## COG: ycjL COG2071 # Protein_GI_number: 16129259 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Escherichia coli K12 # 10 157 111 258 258 298 100.0 4e-81 MSVVISDAWRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSH EVQVEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFAL GVQWHPEWNSSEYALSRILFEGFITACQHHIAEKQRL >gi|299857036|gb|ADWS01000028.1| GENE 11 13095 - 13652 536 185 aa, chain + ## HITS:1 COG:ycjC KEGG:ns NR:ns ## COG: ycjC COG1396 # Protein_GI_number: 16129260 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 185 1 185 185 344 100.0 5e-95 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH TPTTF >gi|299857036|gb|ADWS01000028.1| GENE 12 13927 - 15414 1632 495 aa, chain + ## HITS:1 COG:aldH KEGG:ns NR:ns ## COG: aldH COG1012 # Protein_GI_number: 16129261 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 495 1 495 495 959 97.0 0 MNFHHLAYWQDKALSLAIETRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDID RAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDD IPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGP ALAAGNSVVLKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHDDIDAI AFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQKAASATAAGIFYNQGQ VCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDSAHADSVHGFIREG EGKGQLLLDGRNAKLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEDQALQLAND SQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHAL EKFTELKTIWISLEA >gi|299857036|gb|ADWS01000028.1| GENE 13 15416 - 16696 1508 426 aa, chain + ## HITS:1 COG:ordL KEGG:ns NR:ns ## COG: ordL COG0665 # Protein_GI_number: 16129262 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 1 426 1 426 426 870 99.0 0 MTEHTSSYYAASANKYAPFDTLNESISCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASR IGFGASGRNGGQLVNSYSRDIDVIEKSYGMDTARMLGSMMFEGGEIIRERIKRYQIDCDY RPGGLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDHSGGH IHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAGNAYLGD KVEPELAKRSMPCGTQVITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTADNRLLYGG GVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYRWTGNFLLTLSRMPQFGRLDTNIYYM QGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPFPGGRTLRVPFTAMGAAYYSL RDRLGV >gi|299857036|gb|ADWS01000028.1| GENE 14 16734 - 17999 1240 421 aa, chain + ## HITS:1 COG:goaG KEGG:ns NR:ns ## COG: goaG COG0160 # Protein_GI_number: 16129263 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Escherichia coli K12 # 1 421 1 421 421 794 99.0 0 MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPD LVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKI ARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQ DSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEV QSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGN PLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFND PQTGKPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDVQFDAAMKILQDALS D >gi|299857036|gb|ADWS01000028.1| GENE 15 18119 - 19096 792 325 aa, chain - ## HITS:1 COG:ECs1880 KEGG:ns NR:ns ## COG: ECs1880 COG1221 # Protein_GI_number: 15831134 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 325 6 330 330 641 100.0 0 MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPF ISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKL LRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLR ERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRH GTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLPLDLREFQMQQEKELLQLSLQQGKY NQKRAAELLGLTYHQFRALLKKHQI >gi|299857036|gb|ADWS01000028.1| GENE 16 19263 - 19931 1015 222 aa, chain + ## HITS:1 COG:ECs1881 KEGG:ns NR:ns ## COG: ECs1881 COG1842 # Protein_GI_number: 15831135 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 280 100.0 2e-75 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRR IEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKK EIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEA EAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMKQDNQ >gi|299857036|gb|ADWS01000028.1| GENE 17 19985 - 20209 300 74 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_1422 NR:ns ## KEGG: ECDH10B_1422 # Name: pspB # Def: phage shock protein B # Organism: E.coli_DH10B # Pathway: not_defined # 1 74 1 74 74 125 98.0 4e-28 MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELLQSEQQRLAQLADEAKRMRERIQAL ESILDAEHPNWRDR >gi|299857036|gb|ADWS01000028.1| GENE 18 20209 - 20568 527 119 aa, chain + ## HITS:1 COG:ECs1883 KEGG:ns NR:ns ## COG: ECs1883 COG1983 # Protein_GI_number: 15831137 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 228 100.0 3e-60 MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIIL SFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL >gi|299857036|gb|ADWS01000028.1| GENE 19 20577 - 20798 222 73 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_1424 NR:ns ## KEGG: ECDH10B_1424 # Name: pspD # Def: peripheral inner membrane phage-shock protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 73 1 73 73 112 100.0 6e-24 MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVARRPLKMLLAVALEPLL SRAANKLAQRYKR >gi|299857036|gb|ADWS01000028.1| GENE 20 20873 - 21187 434 104 aa, chain + ## HITS:1 COG:pspE KEGG:ns NR:ns ## COG: pspE COG0607 # Protein_GI_number: 16129269 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 104 1 104 104 206 100.0 1e-53 MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAVPDKN DTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKVKG >gi|299857036|gb|ADWS01000028.1| GENE 21 21372 - 22148 549 258 aa, chain + ## HITS:1 COG:ycjM KEGG:ns NR:ns ## COG: ycjM COG0366 # Protein_GI_number: 16129270 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 256 1 256 568 548 100.0 1e-156 MGPLPRKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVL ITYADQFHSNDLKPLPTFNQFYHQWLQSIFSHVHLLPFYPWSSDDGFSVIDYHQVASEAG EWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQHPGFEDFFIAVDPQTDLSAVTRPR ALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLAKGAEYVRLDAV GFMWKEPGTSCIHLEKHI >gi|299857036|gb|ADWS01000028.1| GENE 22 22196 - 23077 528 293 aa, chain + ## HITS:1 COG:ycjM KEGG:ns NR:ns ## COG: ycjM COG0366 # Protein_GI_number: 16129270 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 293 276 568 568 603 99.0 1e-172 MIITETNVPHKDNIAYFGAGDDEAHMVYQFSLPPLVLHAVQKQNVEALCAWAQNLTLPSS NTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVT YMDALSRRESSDEERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAIN RKKYHSKEITRELNDEATLRHAVYHELSRLITLRRSHNEFHPDNNFTIDTINSSVMRIQR SNADGNCLTGLFNVSKNIQHVNITNLHGRDLISEVDILGNEITLRPWQVMWIK >gi|299857036|gb|ADWS01000028.1| GENE 23 23091 - 24383 1599 430 aa, chain + ## HITS:1 COG:ycjN KEGG:ns NR:ns ## COG: ycjN COG1653 # Protein_GI_number: 16129271 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 430 1 430 430 813 99.0 0 MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGI TVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEG AFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLND PANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGNITLDTPEMMQALTYYRDLAAN TMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTS LTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKA LGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLPGTLQASQ KKLDELIEQH >gi|299857036|gb|ADWS01000028.1| GENE 24 24404 - 25285 963 293 aa, chain + ## HITS:1 COG:ECs1890 KEGG:ns NR:ns ## COG: ECs1890 COG1175 # Protein_GI_number: 15831144 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 293 1 293 293 487 99.0 1e-138 MNRLFSGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNY VRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPS ISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFI SFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYL LTTKVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILLTRKRVNLNGNK >gi|299857036|gb|ADWS01000028.1| GENE 25 25272 - 26114 901 280 aa, chain + ## HITS:1 COG:ycjP KEGG:ns NR:ns ## COG: ycjP COG0395 # Protein_GI_number: 16129273 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Escherichia coli K12 # 1 280 1 280 280 460 99.0 1e-129 MATNKRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLKHYV DIFNPMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMF SGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDG LNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTP DYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG >gi|299857036|gb|ADWS01000028.1| GENE 26 26145 - 27197 1269 350 aa, chain + ## HITS:1 COG:ycjQ KEGG:ns NR:ns ## COG: ycjQ COG1063 # Protein_GI_number: 16129274 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 350 1 350 350 697 99.0 0 MKKLVATAPRVAALVEYEDRAILANEVKIRVRFGAPKHGTEVVDFRAASPFIDEDFNGEW QMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVTDYAVGDSVCGYGPLSETVIINAV NNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDFVVVVGLGAIGQIAIQLAKRA GASVVIGVDPIAYRCDIARRHGADFCLNPIGTDVGKEIKTLTGKQGADVIIETSGYADAL QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRI EETCWELLMNGYLNCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVTF >gi|299857036|gb|ADWS01000028.1| GENE 27 27215 - 28003 960 262 aa, chain + ## HITS:1 COG:ycjR KEGG:ns NR:ns ## COG: ycjR COG1082 # Protein_GI_number: 16129275 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Escherichia coli K12 # 1 262 4 265 265 545 99.0 1e-155 MKIGTQNQAFFPENILEKFRYIKEMGFDGFEIDGKLLVNNLEEVKAAIKETGLPVTTACG GYDGWIGDFIEERRLNGLKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDG DRKMVSDSLRVLEQVAARTGTVVYLEPLNRYQDHMINTLADARRYIVENDLKHVQIIGDF YHMNIEEDNLAQALHDNRDLLGHVHIADNHRYQPGSGTLDFHALFEQLRADNYQGYVVYE GRIRAEDPAQAYRDSLAWLRTC >gi|299857036|gb|ADWS01000028.1| GENE 28 28025 - 29068 801 347 aa, chain + ## HITS:1 COG:ycjS KEGG:ns NR:ns ## COG: ycjS COG0673 # Protein_GI_number: 16129276 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 347 5 351 351 730 99.0 0 MTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDP QAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKLGK VLAYDFHHRFALDTQQLRDQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLI DIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFH NGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQRELADDNR HLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL >gi|299857036|gb|ADWS01000028.1| GENE 29 29134 - 31332 1399 732 aa, chain + ## HITS:1 COG:ECs1895 KEGG:ns NR:ns ## COG: ECs1895 COG1554 # Protein_GI_number: 15831149 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Escherichia coli O157:H7 # 1 732 24 755 755 1460 97.0 0 MAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDILGMEIAINGEVF SLSREAWQRELDFASGELRRSVVWRTSNGTGYTIASRRFVSADQLPLIVLEITITPLDAD ASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCMVSGDVQ QCYTAKERRLQQHTSAQLHAGETVTLQKLVWIDWRDDRQAVLDEWGSASLRQLEMCAQQS YDQLLAVSTENWRQWWQKRRITVNGGEAHDQQALDYALYHLRIMTPAHDERSSIAAKGLT GEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWES ARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMA LLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNNNAFTSYMAYYNVQQALSIARQFG CSDDAFIHRAEMFLKELWLPETQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDYSR AEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCG LLAQGYHFWREGTEIDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPAL PEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLRLNGQLISVAEESVFCLGDFILP FNGTATTHQEDE >gi|299857036|gb|ADWS01000028.1| GENE 30 31329 - 31988 597 219 aa, chain + ## HITS:1 COG:ycjU KEGG:ns NR:ns ## COG: ycjU COG0637 # Protein_GI_number: 16129278 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli K12 # 1 219 1 219 219 416 98.0 1e-116 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHG GKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLAALRAQQIPVGLASVSLN APTILAALELREFFTFYADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI NASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV >gi|299857036|gb|ADWS01000028.1| GENE 31 32002 - 33084 1049 360 aa, chain + ## HITS:1 COG:ECs1897 KEGG:ns NR:ns ## COG: ECs1897 COG3839 # Protein_GI_number: 15831151 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 360 1 360 360 712 98.0 0 MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGD LLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQ ILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKL HQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVAGFIGSPAM NFIRGTIDGDKFVTETLKLTIPEEKLAVLKTQGSLHKPIVMGIRPEDIHPDAQEENNISA KISVAELTGAEFMLYTTVGGHELVVRAGALNDYHAGENITIHFDMTKCHFFDAETEIALR >gi|299857036|gb|ADWS01000028.1| GENE 32 33129 - 34034 952 301 aa, chain + ## HITS:1 COG:no KEGG:B21_01307 NR:ns ## KEGG: B21_01307 # Name: ompG # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 301 1 301 301 595 99.0 1e-169 MKKLLPCTALVMCAGMACAQAEEKNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAA NGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYV DEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQY TFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSN WDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYS F >gi|299857036|gb|ADWS01000028.1| GENE 33 34145 - 35143 808 332 aa, chain - ## HITS:1 COG:ycjW KEGG:ns NR:ns ## COG: ycjW COG1609 # Protein_GI_number: 16129281 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 332 1 332 332 635 99.0 0 MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEELQYQPNKLARALTSSGF DAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQTSHNPAEDLQKCESKIKQK MIKGIIMLSSPADESFFAQLDKYDIPVVVIGKVEGQYAHVYSVDTDNFGDSIALTDALIE SGHQNIACLHAPLDVHVSVDRVNGYKQSLAAHNIAVRDEWIVDGGYTHETALQAARELLS QSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAVVGYSNETLSFILTPAPGGIDIPTQ ELGQQSCELLFRLISGKPSPQNITVATHMTLK >gi|299857036|gb|ADWS01000028.1| GENE 34 35298 - 36695 1192 465 aa, chain + ## HITS:1 COG:ECs1900 KEGG:ns NR:ns ## COG: ECs1900 COG3106 # Protein_GI_number: 15831154 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 465 1 465 465 961 99.0 0 MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVRE ERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRH FKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSVKWRMMCEGLDP LAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDAWG ESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFN DMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQD AWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARL PGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR >gi|299857036|gb|ADWS01000028.1| GENE 35 36692 - 37753 1120 353 aa, chain + ## HITS:1 COG:ycjF KEGG:ns NR:ns ## COG: ycjF COG3768 # Protein_GI_number: 16129283 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 353 1 353 353 659 99.0 0 MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDEAPEEEGQVEAVMDAAL RPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVALGGCAAGALIIGAGVGSVV TEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQQAGIDQSHPALQRWYASIHE TQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMIAVSPLALVDMAFIAWRNLRLIN RIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRAAQGIG AGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRRQLIGQVKETLQKGKTPSEK >gi|299857036|gb|ADWS01000028.1| GENE 36 37901 - 39442 1412 513 aa, chain + ## HITS:1 COG:tyrR KEGG:ns NR:ns ## COG: tyrR COG3283 # Protein_GI_number: 16129284 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of aromatic amino acids metabolism # Organism: Escherichia coli K12 # 1 513 1 513 513 1012 99.0 0 MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFAELEFESFSSLMAEIRR IAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKVDMANPASCQLFAQKLDRL RNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLMEITPVYLQDENDQHVLTGAVV MLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVEQAQKLAMLSAPLLITGDTGTGK DLFAYACHQASPRAGKPYLALNCASIPEDAVESELFGHAPEGKKGFFEQANGGSVLLDEI GEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGMFREDLYYRL NVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRYAWPGNVRQLK NAIYRALTQLDGYELRPQDILLPDYDAATVAVGEDAMEGSLDEITSRFERSVLTQLYRNY PSTRKLAKRLGVSHTAIANKLREYGLSQKKNEE >gi|299857036|gb|ADWS01000028.1| GENE 37 39486 - 39992 692 168 aa, chain - ## HITS:1 COG:ECs1903 KEGG:ns NR:ns ## COG: ECs1903 COG2077 # Protein_GI_number: 15831157 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 168 1 168 168 310 100.0 9e-85 MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGV CAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGV AIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA >gi|299857036|gb|ADWS01000028.1| GENE 38 40111 - 41076 941 321 aa, chain + ## HITS:1 COG:ycjG KEGG:ns NR:ns ## COG: ycjG COG4948 # Protein_GI_number: 16129286 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 321 15 335 335 591 99.0 1e-169 MRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELEEEGIKGTGECTPYPRYGESDASVMA QIMSVVPQLEKGLTREELQKILPAGAARNALDCALWDLAARKQQQSLADLIGITLPGTVI TAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISERMVAIRTAVPDATLIVDANES WRAEGLAARCQLLADLGVAMLEQPLPAQDDAALENFIHPLPICADESCHTRSNLKALKGR YEMVNIKLDKTGGLTEALALATEARAQGFSLMLGCMLCTSRAISAALPLVPQVSFADLDG PTWLAVDVEPALQFTTGELHL >gi|299857036|gb|ADWS01000028.1| GENE 39 41051 - 41779 352 242 aa, chain - ## HITS:1 COG:ECs1905 KEGG:ns NR:ns ## COG: ECs1905 COG2866 # Protein_GI_number: 15831159 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 242 21 262 262 486 99.0 1e-137 MTVNRPRAERGAFPPGTEHYGRSLLGAPLIWFPATAASRESGLILAGTHGDENSSVVTLS CALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFPAANWKEGETVYRWNSAAE ERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPLACIEDPRHSELGEWLAQAFE LPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDEASEKYLFAMANLLRWHPKDAIR PS >gi|299857036|gb|ADWS01000028.1| GENE 40 41861 - 42043 145 60 aa, chain - ## HITS:1 COG:ECs1906 KEGG:ns NR:ns ## COG: ECs1906 COG0702 # Protein_GI_number: 15831160 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 46 9 54 220 94 100.0 3e-20 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNKMQTTSGKKVIQDR >gi|299857036|gb|ADWS01000028.1| GENE 41 42114 - 43031 1074 305 aa, chain - ## HITS:1 COG:ycjY KEGG:ns NR:ns ## COG: ycjY COG1073 # Protein_GI_number: 16129288 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 305 6 310 310 582 99.0 1e-166 MNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVVSHPGGGVKEQTAGTYAKKLAEK GFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAG YTANAAIQDRRIKAIGTVSAVNIGSMFRNGWENNVKSIDALPYVEAGSNARTSDISSGEY AIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYL TQPMQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPF FEETL >gi|299857036|gb|ADWS01000028.1| GENE 42 43172 - 44071 266 299 aa, chain + ## HITS:1 COG:ycjZ KEGG:ns NR:ns ## COG: ycjZ COG0583 # Protein_GI_number: 16129289 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 299 1 299 299 566 99.0 1e-161 MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEERLGLRLLTRTTRSVVP TEAGEHLLSVLGPMLHDIDSALASLSELQNRPSGTIRITTVEHAAKTILLPAMRTFLKSH PEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRIGPDIPMAIVGSPDYFSRRSV PTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVRMEGQLLLNTIDLIIDAAIDGHG LAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYYPHRRHAGSAFSLFIDRLKYKGAV >gi|299857036|gb|ADWS01000028.1| GENE 43 44408 - 46021 1432 537 aa, chain + ## HITS:1 COG:mppA KEGG:ns NR:ns ## COG: mppA COG4166 # Protein_GI_number: 16129290 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 537 8 544 544 1065 100.0 0 MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDEPASLDPAKAVGLPEIQ VIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNAKWADGTPVTAQDFVYSWQ RLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTAVDAHTLKIQLDKPLPWFVNL TANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERVVNEKLVVVPNTHYWDNAKTVLQ KVTFLPINQESAATKRYLAGDIDITESFPKNMYQKLLKDIPGQVYTPPQLGTYYYAFNTQ KGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPAWHFTPDVTAGFTPEPSPFEQMSQEEL NAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQKIAIAVASMWKKNLGVDVKLQNQEWKTY IDSRNTGNFDVIRASWVGDYNEPSTFLTLLTSTHSGNISRFNNPAYDKVLAQASTENTVK ARNADYNAAEKILMEQAPIAPIYQYTNGRLIKPWLKGYPINNPEDVAYSRTMYIVKH >gi|299857036|gb|ADWS01000028.1| GENE 44 46072 - 47103 773 343 aa, chain - ## HITS:1 COG:ECs1912 KEGG:ns NR:ns ## COG: ECs1912 COG0668 # Protein_GI_number: 15831166 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 343 1 343 343 672 100.0 0 MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSI INYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSR IIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFS IGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTT IGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWA EWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPEQGR >gi|299857036|gb|ADWS01000028.1| GENE 45 47347 - 47604 301 85 aa, chain + ## HITS:1 COG:no KEGG:ECSP_1858 NR:ns ## KEGG: ECSP_1858 # Name: ynaJ # Def: predicted inner membrane protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 85 1 85 85 132 100.0 4e-30 MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMI FVYSLVFTVLLAIPLGIYFLGGEEQ >gi|299857036|gb|ADWS01000028.1| GENE 46 47654 - 48604 991 316 aa, chain - ## HITS:1 COG:ECs1914 KEGG:ns NR:ns ## COG: ECs1914 COG0589 # Protein_GI_number: 15831168 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 630 99.0 1e-180 MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTTLLSPDERTAM RQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQEVISGEHDLVLKMAHQHD RLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAVNLASEEPYHNALNEKLVKET IELAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYNDAIRGQHLLAMKALRQKFGINE NMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK PDQYQTPVELDDEEDD >gi|299857036|gb|ADWS01000028.1| GENE 47 48756 - 49508 850 250 aa, chain - ## HITS:1 COG:ECs1915 KEGG:ns NR:ns ## COG: ECs1915 COG0664 # Protein_GI_number: 15831169 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 501 100.0 1e-142 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA QLAGHTRNVA >gi|299857036|gb|ADWS01000028.1| GENE 48 49703 - 50218 281 171 aa, chain - ## HITS:1 COG:ogt KEGG:ns NR:ns ## COG: ogt COG0350 # Protein_GI_number: 16129296 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Escherichia coli K12 # 1 171 1 171 171 344 98.0 4e-95 MLRLLEEKIATPLGPLLVICDEQFRLRAVEWEEYSERMVQLLDIHYRKEGYERISATNPG GLSDKLRDYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPCGQVMHYGQLAEQLGRPGA ARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKEWLLRHEGYLLL >gi|299857036|gb|ADWS01000028.1| GENE 49 50229 - 51755 1092 508 aa, chain - ## HITS:1 COG:abgT KEGG:ns NR:ns ## COG: abgT COG2978 # Protein_GI_number: 16129297 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Escherichia coli K12 # 13 508 15 510 510 855 99.0 0 MSMSSIPSSSQSGKLYGWVERIGNKVPHPFLLFIYLIIVLMVTTAILSAFGVSAKNPTDG TPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAGLAERVGLLPALMVKMASH VNARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVGRHPIAGLLAAIAGVGCGFTA NLLIVTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMASSVVVLTIVGGLITDKIIEPRL GQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAIALMVIPENGILRDPINHTVMPSPF IKGIVPLIILFFFVVSLAYGIATRTIRRQADLPHLMIEPMKEMAGFIVMVFPLAQFVAMF NWSNMGKFIAVGLTDILESSGLSGIPAFVGLALLSSFLCMFIASGSAIWSILAPIFVPMF MLLGFHPAFAQILFRIADSSVLPLAPVSPFVPLFLGFLQRYKPDAKLGTYYSLVLPYPLI FLVVWLLMLLAWYLVGLPIGPGIYPRLS >gi|299857036|gb|ADWS01000028.1| GENE 50 51792 - 53237 1018 481 aa, chain - ## HITS:1 COG:abgB KEGG:ns NR:ns ## COG: abgB COG1473 # Protein_GI_number: 16129298 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli K12 # 1 481 1 481 481 951 98.0 0 MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLASALESAGFTVTRNVGN IPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTPGENGHGCGHNLLGTAAFA AAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFN TRTLANIQASWCFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITN SGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMTETTVECRFDKACSSY LPNRTLENAMYHALSHFGTPEWNSEELAFAKQIQATLTPNDRQNSLNNIAATGGENGKAF ALRHRETVLANEVAPYAATDNVLAASTDVGDVSWKLPVAQCFSPCFAVGTPLHTWQLVSQ GRTSIAHKGMLLAAKTMAATTVNLFIDSGLLQECQQEHQQVTDTQPYHCPIPKNVTPSPL K >gi|299857036|gb|ADWS01000028.1| GENE 51 53237 - 54547 987 436 aa, chain - ## HITS:1 COG:ECs1922 KEGG:ns NR:ns ## COG: ECs1922 COG1473 # Protein_GI_number: 15831176 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 436 6 441 441 773 99.0 0 MESLNQFVNSLAPKLSHWRRDFHHYAESGWVEFRTATLVAEELQQLGYSLALGREVVNES SRMGLPDELTLQREFERARQQGALAQWIAVFEGGFTGIVATLDTGRPGPVMAFRVDMDAL DLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGLAHTLKQFESGLHGVIKLIFQ PAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAA HAGAKPEDGHNALLAAAQATLALHAIAPHSEGASRVNVGVMQAGSGRNVVPASALLKVET RGASDVINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSPQWVAWLQSQAAQVAG VNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDFDEQVLAIAV ETLARTALNFPWTRGI >gi|299857036|gb|ADWS01000028.1| GENE 52 54723 - 55631 651 302 aa, chain + ## HITS:1 COG:ECs1923 KEGG:ns NR:ns ## COG: ECs1923 COG0583 # Protein_GI_number: 15831177 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 302 1 302 302 581 99.0 1e-166 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP AIGARSIKQLLDYSWTMPTPYGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF LSILPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL QS >gi|299857036|gb|ADWS01000028.1| GENE 53 55961 - 56524 589 187 aa, chain + ## HITS:1 COG:ECs1924 KEGG:ns NR:ns ## COG: ECs1924 COG2840 # Protein_GI_number: 15831178 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 375 99.0 1e-104 MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQLDNFLTTGFLDIIPLSQ PLEFRREGLQHGVQDKLRSGKYPQQASLNLLRQPVEECRKMMFSFIQQAMADGLRNVLII HGKGRDDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRKTAQAKQENWE RHAKRSR >gi|299857036|gb|ADWS01000028.1| GENE 54 56545 - 57777 914 410 aa, chain - ## HITS:1 COG:ydaM_3 KEGG:ns NR:ns ## COG: ydaM_3 COG2199 # Protein_GI_number: 16129302 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 241 410 1 170 170 345 100.0 6e-95 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQLRTGPYSVSSQKELPK YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTEAEPVIIFEGIEAPATLGLKASRS ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA Prediction of potential genes in microbial genomes Time: Sun May 15 22:33:40 2011 Seq name: gi|299857035|gb|ADWS01000029.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont28.1, whole genome shotgun sequence Length of sequence - 54614 bp Number of predicted genes - 56, with homology - 56 Number of transcription units - 29, operones - 9 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 1528 - 1570 0.4 2 2 Tu 1 . - CDS 1596 - 2624 924 ## COG1509 Lysine 2,3-aminomutase - Prom 2669 - 2728 3.3 + Prom 2563 - 2622 3.7 3 3 Tu 1 . + CDS 2666 - 3232 593 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 3239 - 3279 10.5 + Prom 3439 - 3498 4.2 4 4 Tu 1 . + CDS 3520 - 3666 122 ## COG5510 Predicted small secreted protein + Term 3674 - 3711 6.2 + Prom 3706 - 3765 3.4 5 5 Tu 1 . + CDS 3841 - 4158 395 ## COG2076 Membrane transporters of cations and cationic drugs 6 6 Op 1 3/0.778 - CDS 4155 - 4688 655 ## COG3040 Bacterial lipocalin - Prom 4709 - 4768 2.0 - Term 4737 - 4766 2.1 7 6 Op 2 3/0.778 - CDS 4777 - 5910 777 ## COG1680 Beta-lactamase class C and other penicillin binding proteins - Term 5919 - 5953 8.1 8 7 Op 1 10/0.000 - CDS 5973 - 6332 422 ## COG3080 Fumarate reductase subunit D 9 7 Op 2 10/0.000 - CDS 6343 - 6738 504 ## COG3029 Fumarate reductase subunit C 10 7 Op 3 36/0.000 - CDS 6749 - 7483 853 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 11 7 Op 4 . - CDS 7476 - 9284 1989 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 9449 - 9508 3.4 + Prom 9407 - 9466 7.1 12 8 Tu 1 . + CDS 9609 - 10586 983 ## COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) + Term 10619 - 10647 -1.0 + Prom 10625 - 10684 3.9 13 9 Tu 1 . + CDS 10850 - 12307 1386 ## COG0531 Amino acid transporters + Term 12414 - 12461 5.7 - Term 12306 - 12357 10.8 14 10 Op 1 5/0.333 - CDS 12458 - 15781 3494 ## COG3264 Small-conductance mechanosensitive channel 15 10 Op 2 2/0.889 - CDS 15803 - 16771 1010 ## COG0688 Phosphatidylserine decarboxylase - Prom 16802 - 16861 2.2 16 10 Op 3 . - CDS 16868 - 17920 1001 ## COG1162 Predicted GTPases - Prom 18000 - 18059 2.7 + Prom 17913 - 17972 1.9 17 11 Tu 1 . + CDS 18015 - 18560 789 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) + TRNA 18771 - 18846 93.7 # Gly GCC 0 0 + TRNA 18883 - 18958 93.7 # Gly GCC 0 0 + TRNA 18994 - 19069 93.7 # Gly GCC 0 0 18 12 Tu 1 . - CDS 19339 - 20478 878 ## COG1600 Uncharacterized Fe-S protein - Prom 20503 - 20562 5.0 + Prom 20226 - 20285 3.9 19 13 Op 1 6/0.111 + CDS 20492 - 22024 1044 ## PROTEIN SUPPORTED gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 20 13 Op 2 13/0.000 + CDS 21996 - 22457 504 ## COG0802 Predicted ATPase or kinase 21 13 Op 3 10/0.000 + CDS 22476 - 23813 1016 ## COG0860 N-acetylmuramoyl-L-alanine amidase 22 13 Op 4 12/0.000 + CDS 23823 - 25670 1698 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 23 13 Op 5 15/0.000 + CDS 25708 - 26613 543 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 24 13 Op 6 16/0.000 + CDS 26699 - 27007 300 ## COG1923 Uncharacterized host factor I protein + Term 27029 - 27074 6.2 25 13 Op 7 8/0.000 + CDS 27084 - 28364 733 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 26 13 Op 8 21/0.000 + CDS 28450 - 29709 1471 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 27 13 Op 9 11/0.000 + CDS 29712 - 30716 1318 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Term 30746 - 30784 7.2 28 13 Op 10 6/0.111 + CDS 30798 - 30995 223 ## COG3242 Uncharacterized protein conserved in bacteria + Prom 31016 - 31075 4.0 29 14 Tu 1 . + CDS 31099 - 32397 1518 ## COG0104 Adenylosuccinate synthase + Prom 32523 - 32582 4.2 30 15 Op 1 2/0.889 + CDS 32602 - 33027 266 ## COG1959 Predicted transcriptional regulator 31 15 Op 2 7/0.111 + CDS 33066 - 35507 1249 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 + Prom 35588 - 35647 7.1 32 16 Tu 1 . + CDS 35687 - 36418 455 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 + Term 36433 - 36474 7.4 + Prom 36431 - 36490 6.9 33 17 Op 1 6/0.111 + CDS 36545 - 36946 343 ## COG3789 Uncharacterized protein conserved in bacteria 34 17 Op 2 . + CDS 36965 - 37663 897 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription + Term 37669 - 37707 6.1 35 18 Op 1 . + CDS 37714 - 38373 667 ## ECO103_4976 hypothetical protein 36 18 Op 2 5/0.333 + CDS 38391 - 38789 357 ## COG3766 Predicted membrane protein 37 18 Op 3 5/0.333 + CDS 38799 - 39437 350 ## COG5463 Predicted integral membrane protein 38 18 Op 4 1/0.889 + CDS 39440 - 40603 1098 ## COG0754 Glutathionylspermidine synthase 39 18 Op 5 . + CDS 40687 - 42312 1127 ## COG1960 Acyl-CoA dehydrogenases 40 19 Tu 1 . - CDS 42429 - 42716 270 ## SSON_4370 hypothetical protein - Prom 42781 - 42840 4.3 41 20 Tu 1 . - CDS 42853 - 43182 170 ## EcE24377A_4749 hypothetical protein - Prom 43209 - 43268 2.6 + Prom 43147 - 43206 3.7 42 21 Tu 1 . + CDS 43364 - 44113 492 ## COG1073 Hydrolases of the alpha/beta superfamily 43 22 Tu 1 . - CDS 44110 - 44865 828 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 44890 - 44949 3.5 - Term 44912 - 44963 11.1 44 23 Tu 1 . - CDS 44973 - 46037 1200 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 46206 - 46265 6.3 + Prom 46217 - 46276 7.8 45 24 Op 1 11/0.000 + CDS 46392 - 47789 1693 ## COG3037 Uncharacterized protein conserved in bacteria 46 24 Op 2 13/0.000 + CDS 47805 - 48110 348 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 47 24 Op 3 8/0.000 + CDS 48120 - 48584 597 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 48 24 Op 4 9/0.000 + CDS 48598 - 49248 912 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 49 24 Op 5 8/0.000 + CDS 49258 - 50112 1084 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 50 24 Op 6 . + CDS 50112 - 50798 722 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Term 51005 - 51029 -1.0 - Term 50856 - 50886 3.0 51 25 Tu 1 . - CDS 50927 - 51202 265 ## LF82_3468 UPF0379 protein YjfY - Prom 51254 - 51313 4.0 + Prom 51378 - 51437 3.1 52 26 Tu 1 . + CDS 51529 - 51924 680 ## PROTEIN SUPPORTED gi|221800783|ref|NP_418621.2| 30S ribosomal subunit protein S6 + Term 52051 - 52095 0.3 53 27 Op 1 27/0.000 + CDS 52250 - 52477 385 ## PROTEIN SUPPORTED gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 54 27 Op 2 . + CDS 52519 - 52968 720 ## PROTEIN SUPPORTED gi|15804792|ref|NP_290833.1| 50S ribosomal protein L9 + Term 52982 - 53034 13.3 - Term 52982 - 53012 5.0 55 28 Tu 1 . - CDS 53039 - 53596 142 ## ECO26_5371 hypothetical protein 56 29 Tu 1 . + CDS 54180 - 54440 207 ## COG1309 Transcriptional regulator Predicted protein(s) >gi|299857035|gb|ADWS01000029.1| GENE 1 337 - 1206 808 289 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4700 NR:ns ## KEGG: EC55989_4700 # Name: yjeJ # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 289 1 289 289 551 100.0 1e-155 MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELRDLLIALESRMHQKHKL DAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNTLELTDNQGENLTFVLTLH DGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSLLDFLPLYDVDCQENGNLEYD TYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKTREATPGKEIEAITRRMLDFSQR LKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHLRVQSTSKTAPQAK >gi|299857035|gb|ADWS01000029.1| GENE 2 1596 - 2624 924 342 aa, chain - ## HITS:1 COG:yjeK KEGG:ns NR:ns ## COG: yjeK COG1509 # Protein_GI_number: 16131971 # Func_class: E Amino acid transport and metabolism # Function: Lysine 2,3-aminomutase # Organism: Escherichia coli K12 # 1 342 1 342 342 671 98.0 0 MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFI DRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVPGLLHKYHNRALLLVKGGC AVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLT QLEAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAM AKLRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSD DEARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLDLQLRQQ >gi|299857035|gb|ADWS01000029.1| GENE 3 2666 - 3232 593 188 aa, chain + ## HITS:1 COG:ECs5128 KEGG:ns NR:ns ## COG: ECs5128 COG0231 # Protein_GI_number: 15834382 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 377 100.0 1e-105 MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTD SAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNG QPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRS GEYVSRVK >gi|299857035|gb|ADWS01000029.1| GENE 4 3520 - 3666 122 48 aa, chain + ## HITS:1 COG:STM4336 KEGG:ns NR:ns ## COG: STM4336 COG5510 # Protein_GI_number: 16767585 # Func_class: S Function unknown # Function: Predicted small secreted protein # Organism: Salmonella typhimurium LT2 # 1 48 1 48 48 62 95.0 2e-10 MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ >gi|299857035|gb|ADWS01000029.1| GENE 5 3841 - 4158 395 105 aa, chain + ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 105 51 155 155 160 100.0 4e-40 MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMALLAWAMKSLPVGTAYA VWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKLSTH >gi|299857035|gb|ADWS01000029.1| GENE 6 4155 - 4688 655 177 aa, chain - ## HITS:1 COG:ECs5130 KEGG:ns NR:ns ## COG: ECs5130 COG3040 # Protein_GI_number: 15834384 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Escherichia coli O157:H7 # 1 177 1 177 177 365 99.0 1e-101 MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWYEIARFDHRFERGLEKV TATYSLRDDGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRAALKVSFFGPFYGGYNVIA LDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSKFIWVQQPGS >gi|299857035|gb|ADWS01000029.1| GENE 7 4777 - 5910 777 377 aa, chain - ## HITS:1 COG:ECs5131 KEGG:ns NR:ns ## COG: ECs5131 COG1680 # Protein_GI_number: 15834385 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 727 98.0 0 MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYFTWG YADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLSDPATKYWPELTAKQWNGI TLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAVK PSGLSFEQAMQTRVFQPLKLNHTWINVPPPEEKNYAWGYREGKAVHVSPGALDAEAYGVK STIEDMARWVRSNMNPRDINDKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSII NGSGNKIALAAHPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNY PNPARVAAAWQILNALQ >gi|299857035|gb|ADWS01000029.1| GENE 8 5973 - 6332 422 119 aa, chain - ## HITS:1 COG:ECs5132 KEGG:ns NR:ns ## COG: ECs5132 COG3080 # Protein_GI_number: 15834386 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit D # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 207 99.0 3e-54 MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQ SFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGIVTI >gi|299857035|gb|ADWS01000029.1| GENE 9 6343 - 6738 504 131 aa, chain - ## HITS:1 COG:ECs5133 KEGG:ns NR:ns ## COG: ECs5133 COG3029 # Protein_GI_number: 15834387 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit C # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 225 100.0 2e-59 MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGF VDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVA TIVILFVALYW >gi|299857035|gb|ADWS01000029.1| GENE 10 6749 - 7483 853 244 aa, chain - ## HITS:1 COG:ECs5134 KEGG:ns NR:ns ## COG: ECs5134 COG0479 # Protein_GI_number: 15834388 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 516 100.0 1e-146 MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRM AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY NEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIAT LKPR >gi|299857035|gb|ADWS01000029.1| GENE 11 7476 - 9284 1989 602 aa, chain - ## HITS:1 COG:frdA KEGG:ns NR:ns ## COG: frdA COG1053 # Protein_GI_number: 16131979 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Escherichia coli K12 # 1 602 1 602 602 1170 100.0 0 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDH DSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGM KIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGT LVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGS GILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR KGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMG GIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGN GNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAMEEGCGIYRTPELMQKTIDKL AELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGC TERDDVNFLKHTLAFRDADGTTRLEYSDVKITTLPPAKRVYGGEADAADKAEAANKKEKA NG >gi|299857035|gb|ADWS01000029.1| GENE 12 9609 - 10586 983 325 aa, chain + ## HITS:1 COG:ECs5136 KEGG:ns NR:ns ## COG: ECs5136 COG2269 # Protein_GI_number: 15834390 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Truncated, possibly inactive, lysyl-tRNA synthetase (class II) # Organism: Escherichia coli O157:H7 # 1 325 11 335 335 662 100.0 0 MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRF VGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRP HYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKLDLSN VADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVYY KGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALG VDRLVMLALGAETLAEVIAFSVDRA >gi|299857035|gb|ADWS01000029.1| GENE 13 10850 - 12307 1386 485 aa, chain + ## HITS:1 COG:ECs5137 KEGG:ns NR:ns ## COG: ECs5137 COG0531 # Protein_GI_number: 15834391 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 485 30 514 514 854 99.0 0 MIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKEKGGIYSWM NNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVG LLAVAWMILVTVVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINF LASPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGY SLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASLSLGVWFARI TGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVF ILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTRMSAM IATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRMANKP ELALD >gi|299857035|gb|ADWS01000029.1| GENE 14 12458 - 15781 3494 1107 aa, chain - ## HITS:1 COG:ECs5138 KEGG:ns NR:ns ## COG: ECs5138 COG3264 # Protein_GI_number: 15834392 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 1107 1 1107 1107 2057 99.0 0 MRLIITFLMAWCLSWGAYAATAPDSKQISQELEQAKAAKPAQPEVVEALQSALNALEERK GSLERIKQYQEVIDNYPKLSATLRAQLNNMRDEPRSVSPGMSTDALNQEILQVSSQLLDK SRQAQQEQERAREIADSLNQLPQQQTDARRQLNEIERRLGTLTGNTPLNQAQNFALQSDS ARLKALVDELELAQLSANNRQELARLRSELAEKESQQLDAYLQALRNQLNSQRQLEAERA LESTELLAENSADLPKDIVAQFKINRELSAALNQQAQRMDLVASQQRQATSQTLQVRQAL NTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDLLNKQPLL RQIHQADGQPLTAEQNRILEAQLRTQRELLNSLLQGGDTLLLELTKLKVSNGQLEDALKE VNEATHRYLFWTSDVRPMTIAWPLEIAQDLRRLISLDTFSQLGKASVMMLTSKETILPLF GALILVGCSIYSRRYFTRFLERSAAKVGKVTQDHFWLTLRTLFWSILVASPLPVLWMTLG YGLREAWPYPLAVAIGDGVTATVPLLWVVMICATFARPNGLFIAHFGWPRERVSRGMRYY LMSIGLIVPLIMALMMFDNLDDREFSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKE GSGDNITNHMLWNMMIGAPLVAILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRR WMLIQRRRLAFDRAKHRRAEMLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLR LVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILV FIITTQLVRNLPALLELAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKL QWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTIS DWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLV IDNPAPEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQ MRLESLNGKQTGRTLTSAGKGRQAGSL >gi|299857035|gb|ADWS01000029.1| GENE 15 15803 - 16771 1010 322 aa, chain - ## HITS:1 COG:ECs5139 KEGG:ns NR:ns ## COG: ECs5139 COG0688 # Protein_GI_number: 15834393 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Escherichia coli O157:H7 # 1 322 1 322 322 664 100.0 0 MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTASY RTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAG NYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFA RNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVA LLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSVTKIGQPLAVSTETFVTPDAEPAPL PAEEIEAEHDASPLVDDKKDQV >gi|299857035|gb|ADWS01000029.1| GENE 16 16868 - 17920 1001 350 aa, chain - ## HITS:1 COG:ECs5140 KEGG:ns NR:ns ## COG: ECs5140 COG1162 # Protein_GI_number: 15834394 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Escherichia coli O157:H7 # 14 350 1 337 337 692 99.0 0 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVS DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD >gi|299857035|gb|ADWS01000029.1| GENE 17 18015 - 18560 789 181 aa, chain + ## HITS:1 COG:orn KEGG:ns NR:ns ## COG: orn COG1949 # Protein_GI_number: 16131987 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Escherichia coli K12 # 1 181 24 204 204 367 100.0 1e-102 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK L >gi|299857035|gb|ADWS01000029.1| GENE 18 19339 - 20478 878 379 aa, chain - ## HITS:1 COG:yjeS KEGG:ns NR:ns ## COG: yjeS COG1600 # Protein_GI_number: 16131988 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli K12 # 1 379 1 379 379 784 100.0 0 MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWLDKQYHGEMDWMARHGM LRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVSRYALGRDYHKLLRNRLKK LGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLVD IPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEELRPLMG NRIYGCDDCQLICPWNRYSQLTTEEDFSPRKPLHAPELIELFAWSEEKFLKVTEGSAIRR IGHLRWLRNIAVALGNAPWDETILTALESRKGEHPLLDEHIAWAIAQQIERRNACIVEVQ LPKKQRLVRVIEKGLPRDA >gi|299857035|gb|ADWS01000029.1| GENE 19 20492 - 22024 1044 510 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 [Vibrio cholerae MZO-2] # 8 494 3 490 490 406 43 1e-112 MKKNPVSIPHTVWHADDIRRGEREAADALGLTLYELMLRAGEAAFQVCRSAYPDARHWLV LCGHGNNGGDGYVVARLATAVGIEVTLLAQESDKPLPEEAALAREAWLNAGGEIHASNIV WPESVDLIVDALLGTGLQQAPRESISQLIDHANSHPAPIAAVDIPSGLLAETGATPGAVI NADHTITFIALKPGLLTGKARDVTGQLHFDSLGLDSWLAGQETKIQRFSAEQLSHWLKPR RPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLVRVLTRSENIAPLLTARPELM VHELTMDSLTESLEWADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPD KRHNRVITPHPGEAARLLGCSVAEIESDRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDAL GIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGM LATDLFSTLQRIVNPEVTDKNHDESSNSAP >gi|299857035|gb|ADWS01000029.1| GENE 20 21996 - 22457 504 153 aa, chain + ## HITS:1 COG:ECs5144 KEGG:ns NR:ns ## COG: ECs5144 COG0802 # Protein_GI_number: 15834398 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 313 100.0 1e-85 MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTFSRGFLQALGHQGNVKS PTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFANDAICLVEWPQQGTGVLPDP DVEIHIDYQAQGREARVSAVSSAGELLLARLAG >gi|299857035|gb|ADWS01000029.1| GENE 21 22476 - 23813 1016 445 aa, chain + ## HITS:1 COG:amiB KEGG:ns NR:ns ## COG: amiB COG0860 # Protein_GI_number: 16131991 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli K12 # 1 445 1 445 445 814 99.0 0 MMYRIRNWLVATLLLLCTPVGAATLSDIQVSNGNQQARITLSFIGDPDYAFSHQSKRTVA LDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDLTENGKTEAVKRQNGSNYT VVFTINADAPPPPPPPPVVAKRVETPAVVAPRVSEPARNPFKTESNRTTGVISSNTVTRP AARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGVL TRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMASWLE QHEKQSELLGGAGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEIHK RRPEHASLGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAICKGLRNYFLAHP MQSAPQGATAQTASTVTTPDRTLPN >gi|299857035|gb|ADWS01000029.1| GENE 22 23823 - 25670 1698 615 aa, chain + ## HITS:1 COG:mutL KEGG:ns NR:ns ## COG: mutL COG0323 # Protein_GI_number: 16131992 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Escherichia coli K12 # 1 615 1 615 615 1160 99.0 0 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQLTPGEAPVC AQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQSDAQHVTIRAVPLPLRQQNLQILIP ELIGYLAKQSVFEPGNIAQWIARNLMSEHAQWSMAQAITLLADVERLCPQLVKTPPGGLL QSVDLHPAIKALKDE >gi|299857035|gb|ADWS01000029.1| GENE 23 25708 - 26613 543 301 aa, chain + ## HITS:1 COG:miaA KEGG:ns NR:ns ## COG: miaA COG0324 # Protein_GI_number: 16131993 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Escherichia coli K12 # 1 301 16 316 316 580 100.0 1e-165 MGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDP SQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQ QAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPY QVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMW SYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIA G >gi|299857035|gb|ADWS01000029.1| GENE 24 26699 - 27007 300 102 aa, chain + ## HITS:1 COG:ECs5148 KEGG:ns NR:ns ## COG: ECs5148 COG1923 # Protein_GI_number: 15834402 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Escherichia coli O157:H7 # 1 102 1 102 102 177 100.0 5e-45 MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS TVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE >gi|299857035|gb|ADWS01000029.1| GENE 25 27084 - 28364 733 426 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 50 398 55 407 425 286 46 1e-76 MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGE GKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLER VEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRID VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNT VLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTER LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPA LIDYLI >gi|299857035|gb|ADWS01000029.1| GENE 26 28450 - 29709 1471 419 aa, chain + ## HITS:1 COG:ECs5150 KEGG:ns NR:ns ## COG: ECs5150 COG0330 # Protein_GI_number: 15834404 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 419 1 419 419 671 99.0 0 MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKG TGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEP GLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVEMNVQYRVTNPEKYLFSVTSP DDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQA ARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILE AQGEVARFAKLLPEYKAAPEITRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLK GGNAPAAKSDNGTSNLLRLPPASSSTTSGASNTSSTSQGDIMDQRRANAQRNDYQRQGE >gi|299857035|gb|ADWS01000029.1| GENE 27 29712 - 30716 1318 334 aa, chain + ## HITS:1 COG:ECs5151 KEGG:ns NR:ns ## COG: ECs5151 COG0330 # Protein_GI_number: 15834405 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 566 100.0 1e-161 MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIE TVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLK RKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAE RVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHRS QGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRSL RAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR >gi|299857035|gb|ADWS01000029.1| GENE 28 30798 - 30995 223 65 aa, chain + ## HITS:1 COG:ECs5152 KEGG:ns NR:ns ## COG: ECs5152 COG3242 # Protein_GI_number: 15834406 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 65 1 65 65 80 100.0 6e-16 MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRRFGGGLVVAGVVVYYML RKTIG >gi|299857035|gb|ADWS01000029.1| GENE 29 31099 - 32397 1518 432 aa, chain + ## HITS:1 COG:ECs5153 KEGG:ns NR:ns ## COG: ECs5153 COG0104 # Protein_GI_number: 15834407 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 867 100.0 0 MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGI LRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREK ARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAE AVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVT SSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA TTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTP LAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDR TETMILRDPFDA >gi|299857035|gb|ADWS01000029.1| GENE 30 32602 - 33027 266 141 aa, chain + ## HITS:1 COG:ECs5154 KEGG:ns NR:ns ## COG: ECs5154 COG1959 # Protein_GI_number: 15834408 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 278 100.0 3e-75 MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVKIINQLSRAGYVTAVRG KNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLTELD NYTLADLVEENQPLYKLLLVE >gi|299857035|gb|ADWS01000029.1| GENE 31 33066 - 35507 1249 813 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 21 728 4 705 730 485 37 1e-136 MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVELHIEGEEQLEGLRRRLR AMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIH GDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEAGVGFVVPDDSRLSFDILIPP DQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYIWPQA VEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA DVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMVCEMTVS SKGRLTGYKFYEAVMSSHARLTYTKVWHILQGDQDLREQYAPLVKHLEELHNLYKVLDKA REERGGISFESEEAKFMFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEP ALFRIHDKPSTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESVADRPDAEMLQTMLL RSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETG GYHYSMEEMLQLGQHCSMAERRADEATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFF VRLDDLFIDGLVHVSSLDNDYYRFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKI DFSLISSERAPRNVGKTAREKAKKGDAGKKGGKRRQVGKKVNFEPDSAFRGEKKTKPKAA KKDARKAKKPSAKTQKIAAATKAKRAAKKKVAE >gi|299857035|gb|ADWS01000029.1| GENE 32 35687 - 36418 455 243 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 3 242 7 246 255 179 40 2e-44 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR QRS >gi|299857035|gb|ADWS01000029.1| GENE 33 36545 - 36946 343 133 aa, chain + ## HITS:1 COG:ECs5157 KEGG:ns NR:ns ## COG: ECs5157 COG3789 # Protein_GI_number: 15834411 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 228 99.0 2e-60 MTWNPLALATALQTVPEQNIDVTNSESALIIKMNDYGDLQINILFTSRQMIIETFICPVS SISNPDEFNTFLLRNQKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEITSLVDN ALDLAEITEEYSH >gi|299857035|gb|ADWS01000029.1| GENE 34 36965 - 37663 897 232 aa, chain + ## HITS:1 COG:yjfJ KEGG:ns NR:ns ## COG: yjfJ COG1842 # Protein_GI_number: 16132004 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Escherichia coli K12 # 1 232 1 232 232 291 100.0 7e-79 MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSH DKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDG VEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQ AERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE >gi|299857035|gb|ADWS01000029.1| GENE 35 37714 - 38373 667 219 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4976 NR:ns ## KEGG: ECO103_4976 # Name: yjfK # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 219 1 219 219 422 100.0 1e-117 MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSH IDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAK VMGAMILNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDT YEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG >gi|299857035|gb|ADWS01000029.1| GENE 36 38391 - 38789 357 132 aa, chain + ## HITS:1 COG:ECs5160 KEGG:ns NR:ns ## COG: ECs5160 COG3766 # Protein_GI_number: 15834414 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 132 1 132 132 220 100.0 6e-58 MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNNTAASLAFSGTLLGYVI PLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSEKIINHNTAAGMFMGTAAL AGGIFNAACMTW >gi|299857035|gb|ADWS01000029.1| GENE 37 38799 - 39437 350 212 aa, chain + ## HITS:1 COG:ECs5161 KEGG:ns NR:ns ## COG: ECs5161 COG5463 # Protein_GI_number: 15834415 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli O157:H7 # 1 212 1 212 212 372 94.0 1e-103 MARKRKSRNNSKIGHGAISRIGRPHNPFEPRRNRYAQKYLTLVLMGGAVFLIVKGWSESS DVDNDGDGTFYSTVQDCIDDGNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYY DNVEQSWIPVISGFLLSRVIRKDRDEQFVYNSGGSSFASRPVWRNTSGDYSWRSGSGKKE SYSSGGFTTKKASTVSRGGYGRSSSARGHWGG >gi|299857035|gb|ADWS01000029.1| GENE 38 39440 - 40603 1098 387 aa, chain + ## HITS:1 COG:ECs5162 KEGG:ns NR:ns ## COG: ECs5162 COG0754 # Protein_GI_number: 15834416 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Escherichia coli O157:H7 # 1 387 1 387 387 801 99.0 0 MLRHNVPVRRDLDQIAANNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMC LEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNAD TPTSLYESAYFQWLWLEDARRSGIIPRDADQYNAIQERLISRFSELYSREPFYFCCCQDT DEDRSTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRD DNGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFEGEKPQIAAGESYV RKPIYSREGGNVTIFDGQNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDE ACGMGIREDNTLITKDTSRFVPHYIAG >gi|299857035|gb|ADWS01000029.1| GENE 39 40687 - 42312 1127 541 aa, chain + ## HITS:1 COG:aidB KEGG:ns NR:ns ## COG: aidB COG1960 # Protein_GI_number: 16132009 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli K12 # 1 541 6 546 546 1102 99.0 0 MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLELGR LANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEEDARSGAFVARAAR FMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQKRGLLI GMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGGLSCFFV PRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRF DCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLAR AWDRRADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPV NSIWEGSGNIMCLDVLRVLNKQAGVYDLLLEAFVEVKGQDRYFDRAVRRLQQQLRKPAEE LGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGGVRLSEQIQNDLLLRATGGVC V >gi|299857035|gb|ADWS01000029.1| GENE 40 42429 - 42716 270 95 aa, chain - ## HITS:1 COG:no KEGG:SSON_4370 NR:ns ## KEGG: SSON_4370 # Name: yjfN # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 95 6 100 100 172 100.0 2e-42 MELTMKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERI VALKADEQGASWYRIITMYEDQQPDNWRVQAILYA >gi|299857035|gb|ADWS01000029.1| GENE 41 42853 - 43182 170 109 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_4749 NR:ns ## KEGG: EcE24377A_4749 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 109 34 142 142 202 100.0 4e-51 MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTNHPQEIRRDQTQGLQRIGSVS TMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYSQAILYRK >gi|299857035|gb|ADWS01000029.1| GENE 42 43364 - 44113 492 249 aa, chain + ## HITS:1 COG:ECs5166 KEGG:ns NR:ns ## COG: ECs5166 COG1073 # Protein_GI_number: 15834420 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli O157:H7 # 1 249 1 249 249 498 99.0 1e-141 MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQAGLRVIMP DAPDHGSRFSGDAARRLNQFWQILLQSMQEFTTLRAAIAEEKWLLDDRLAVGGASMGAMT ALGITARHPTVRCTASMMGSGYFTSLARSLFPPLIPETTAQQNEFNNIVAPLAEWEATNH LEQLSDRPLLLWHGLDDDVVPADESLRLQQALSETGRDKLLTCSWQPGVRHRITPEALDA AVTFFRQHL >gi|299857035|gb|ADWS01000029.1| GENE 43 44110 - 44865 828 251 aa, chain - ## HITS:1 COG:ECs5167 KEGG:ns NR:ns ## COG: ECs5167 COG1349 # Protein_GI_number: 15834421 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 482 100.0 1e-136 MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLDESGKLKKVRNGAEAIT QQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCGSTAFLLGREMCGKPVQII TNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSENSLYAGHWMFTSGKGLTAEGL YKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLFSRADQIDMLITGKNANPEILQQ LEAQGVSILRV >gi|299857035|gb|ADWS01000029.1| GENE 44 44973 - 46037 1200 354 aa, chain - ## HITS:1 COG:ECs5168 KEGG:ns NR:ns ## COG: ECs5168 COG2220 # Protein_GI_number: 15834422 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Escherichia coli O157:H7 # 1 354 3 356 356 752 100.0 0 MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCV DFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHN DHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHAL DAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEH QIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWE MKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL >gi|299857035|gb|ADWS01000029.1| GENE 45 46392 - 47789 1693 465 aa, chain + ## HITS:1 COG:sgaT KEGG:ns NR:ns ## COG: sgaT COG3037 # Protein_GI_number: 16132015 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 465 20 484 484 806 99.0 0 MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSG ILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVL LRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKP TQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVM TIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNG ISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPM FFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPM MQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQSA >gi|299857035|gb|ADWS01000029.1| GENE 46 47805 - 48110 348 101 aa, chain + ## HITS:1 COG:ECs5170 KEGG:ns NR:ns ## COG: ECs5170 COG3414 # Protein_GI_number: 15834424 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Escherichia coli O157:H7 # 1 101 1 101 101 194 99.0 3e-50 MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHI AGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKAHFPQDVK >gi|299857035|gb|ADWS01000029.1| GENE 47 48120 - 48584 597 154 aa, chain + ## HITS:1 COG:ECs5171 KEGG:ns NR:ns ## COG: ECs5171 COG1762 # Protein_GI_number: 15834425 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 287 96.0 5e-78 MKLRDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYYQAILDAVEQHGPYFVL APGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVDILITMAAVDANTHQEVGIMQ IVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA >gi|299857035|gb|ADWS01000029.1| GENE 48 48598 - 49248 912 216 aa, chain + ## HITS:1 COG:ECs5172 KEGG:ns NR:ns ## COG: ECs5172 COG0269 # Protein_GI_number: 15834426 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 420 100.0 1e-117 MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVL ADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWE QAQQWRDAGIQQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLF KGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG >gi|299857035|gb|ADWS01000029.1| GENE 49 49258 - 50112 1084 284 aa, chain + ## HITS:1 COG:ECs5173 KEGG:ns NR:ns ## COG: ECs5173 COG3623 # Protein_GI_number: 15834427 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 580 99.0 1e-165 MLSKQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLDWSRDQRLAL VNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYD VYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF QLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK QSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGMVEAA >gi|299857035|gb|ADWS01000029.1| GENE 50 50112 - 50798 722 228 aa, chain + ## HITS:1 COG:ECs5174 KEGG:ns NR:ns ## COG: ECs5174 COG0235 # Protein_GI_number: 15834428 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 458 98.0 1e-129 MQKLKQQVFEANMELPRYGLVTFTWGNVSAIDRERELVVIKPSGVAYETMKADDMVVVDM SGKVVEGEYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYF FGDIPCTRGLSEEEVQGEYERNTGKVIIETLGYAEPLHTPGIVVYQHGPFAWGKDAHDAV HNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRKHGPNAYYGQK >gi|299857035|gb|ADWS01000029.1| GENE 51 50927 - 51202 265 91 aa, chain - ## HITS:1 COG:no KEGG:LF82_3468 NR:ns ## KEGG: LF82_3468 # Name: yjfY # Def: UPF0379 protein YjfY # Organism: E.coli_LF82 # Pathway: not_defined # 1 91 1 91 91 141 100.0 6e-33 MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYINHNFATESEARQALNEE TDAQGATYYHVILMREPGSNGNMHASADIYR >gi|299857035|gb|ADWS01000029.1| GENE 52 51529 - 51924 680 131 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|221800783|ref|NP_418621.2| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12 substr. MG1655] # 1 131 1 131 135 266 100 2e-70 MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANET ADDAEAGDSEE >gi|299857035|gb|ADWS01000029.1| GENE 53 52250 - 52477 385 75 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. Sakai] # 1 75 1 75 75 152 100 3e-36 MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK RARYLSLLPYTDRHQ >gi|299857035|gb|ADWS01000029.1| GENE 54 52519 - 52968 720 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804792|ref|NP_290833.1| 50S ribosomal protein L9 [Escherichia coli O157:H7 EDL933] # 1 149 1 149 149 281 100 4e-75 MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAE VLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNG VLRTTGEHEVSFQVHSEVFAKVIVNVVAE >gi|299857035|gb|ADWS01000029.1| GENE 55 53039 - 53596 142 185 aa, chain - ## HITS:1 COG:no KEGG:ECO26_5371 NR:ns ## KEGG: ECO26_5371 # Name: yjfZ # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 185 80 264 264 382 99.0 1e-105 MNGDNSFGWNHEATLDNIHAQKYNKAHAGARLTAELKYLLQDVESFEPNSKYTIHEVVLG PGYGTPDYTGQTIGYVVTLPAQMPNCWSSELPTIDLYIDQLRTVTGVSNALGFIIAALLN AYSDLPHDLKIGLRSLSNSAAIYSGLGFERVPQDRDIRSDRMHLTPANHPDLWTQENGEW IYLRN >gi|299857035|gb|ADWS01000029.1| GENE 56 54180 - 54440 207 86 aa, chain + ## HITS:1 COG:ECs5181 KEGG:ns NR:ns ## COG: ECs5181 COG1309 # Protein_GI_number: 15834435 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 10 86 1 77 131 152 96.0 2e-37 MHSENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKYNIFKPGIDPLQVNINIAALGG YYLINQHTLGLVYLVRRKTPSFRAGI Prediction of potential genes in microbial genomes Time: Sun May 15 22:34:14 2011 Seq name: gi|299857034|gb|ADWS01000030.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont29.1, whole genome shotgun sequence Length of sequence - 54166 bp Number of predicted genes - 65, with homology - 65 Number of transcription units - 36, operones - 12 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 162 - 464 477 ## EC55989_0797 DNA packaging protein from bacteriophage origin - Term 474 - 502 1.0 2 1 Op 2 . - CDS 506 - 1186 854 ## EC55989_0796 major head coat protein from bacteriophage origin 3 1 Op 3 . - CDS 1179 - 1538 455 ## EC55989_0796 major head coat protein from bacteriophage origin - Term 1547 - 1572 -0.5 4 1 Op 4 . - CDS 1594 - 1926 311 ## ECUMN_1420 head decoration protein from bacteriophage origin 5 1 Op 5 4/0.500 - CDS 1936 - 3255 1220 ## COG0616 Periplasmic serine proteases (ClpP class) 6 1 Op 6 . - CDS 3236 - 4837 1019 ## COG5511 Bacteriophage capsid protein 7 1 Op 7 . - CDS 4834 - 5040 175 ## SSON_2429 putative head-tail joining protein of prophage 8 1 Op 8 4/0.500 - CDS 5037 - 6782 1559 ## COG5525 Bacteriophage tail assembly protein - Prom 6839 - 6898 1.7 9 2 Tu 1 . - CDS 6937 - 7482 352 ## COG4220 Phage DNA packaging protein, Nu1 subunit of terminase - Prom 7568 - 7627 6.1 + Prom 8077 - 8136 3.1 10 3 Tu 1 . + CDS 8161 - 8571 136 ## COG5562 Phage envelope protein + Term 8630 - 8666 1.7 - Term 8807 - 8857 4.8 11 4 Op 1 . - CDS 8858 - 9040 155 ## ECED1_1711 conserved hypothetical protein from phage origin 12 4 Op 2 . - CDS 9112 - 9609 384 ## ECED1_1712 conserved hypothetical protein from phage origin, putative KilA, N-terminal domain - Prom 9803 - 9862 6.1 - Term 9748 - 9780 3.8 13 5 Tu 1 . - CDS 9864 - 10049 122 ## ECO26_0865 putative lipoprotein Rz1 precursor 14 6 Op 1 . - CDS 10266 - 10763 283 ## COG3772 Phage-related lysozyme (muraminidase) 15 6 Op 2 . - CDS 10763 - 10978 186 ## APECO1_513 phage lysis protein - Prom 11011 - 11070 1.5 + Prom 11318 - 11377 7.7 16 7 Tu 1 . + CDS 11550 - 12632 1054 ## COG3203 Outer membrane protein (porin) + Term 12684 - 12713 -0.3 - Term 12672 - 12701 0.5 17 8 Tu 1 . - CDS 12821 - 13204 300 ## SSON_2441 hypothetical protein - Prom 13256 - 13315 2.1 18 9 Tu 1 . - CDS 13427 - 13654 257 ## COG4570 Holliday junction resolvase 19 10 Op 1 . - CDS 13786 - 14076 143 ## ECH74115_1608 hypothetical protein 20 10 Op 2 . - CDS 14069 - 14239 138 ## EFER_2709 prophage protein NinE 21 10 Op 3 . - CDS 14239 - 14694 287 ## ECSE_0581 hypothetical protein - Prom 14795 - 14854 1.6 - Term 14804 - 14844 6.4 22 11 Tu 1 . - CDS 14887 - 15669 53 ## EcE24377A_0818 hypothetical protein - Prom 15694 - 15753 4.8 23 12 Tu 1 . - CDS 15844 - 16059 68 ## ECUMN_0597 hypothetical protein - Prom 16218 - 16277 3.2 24 13 Tu 1 . - CDS 16279 - 16518 141 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 16636 - 16695 4.7 - Term 17992 - 18029 5.5 25 14 Op 1 . - CDS 18061 - 18393 237 ## COG2076 Membrane transporters of cations and cationic drugs 26 14 Op 2 . - CDS 18461 - 18763 73 ## EC55989_0771 Ren protein from phage origin 27 14 Op 3 . - CDS 18760 - 19461 433 ## ECH74115_1601 replication protein P 28 14 Op 4 . - CDS 19458 - 20462 490 ## ECUMN_0591 replication protein O frm phage origin 29 14 Op 5 . - CDS 20474 - 21013 461 ## EC55989_0768 regulatory protein CII (modular protein) from bacteriophage origin; putative coiled-coil 30 14 Op 6 . - CDS 21083 - 21313 112 ## ECUMN_0589 Cro - Prom 21334 - 21393 4.6 31 15 Tu 1 . + CDS 21352 - 22107 345 ## COG2932 Predicted transcriptional regulator + Term 22229 - 22258 -0.5 32 16 Op 1 . + CDS 22702 - 22908 196 ## ECIAI1_0759 putative prophage Kil protein (modular protein) 33 16 Op 2 . + CDS 22985 - 23281 319 ## ECUMN_1389 host-nuclease inhibitor protein gam from bacteriophage origin 34 16 Op 3 . + CDS 23287 - 24072 681 ## ECUMN_0583 recombination protein bet from phage origin 35 17 Tu 1 . + CDS 24225 - 24749 386 ## EC55989_0762 exonuclease from phage origin + Term 24810 - 24844 3.4 36 18 Op 1 . + CDS 24901 - 25092 109 ## EC55989_0761 conserved hypothetical protein from phage origin 37 18 Op 2 . + CDS 25169 - 25384 195 ## ECB_00489 hypothetical protein + Term 25407 - 25433 -0.6 + Prom 25404 - 25463 2.6 38 18 Op 3 . + CDS 25483 - 25704 148 ## COG1734 DnaK suppressor protein - Term 25843 - 25880 4.0 39 19 Tu 1 . - CDS 25915 - 26445 126 ## G2583_0942 hypothetical protein - Prom 26558 - 26617 5.7 + Prom 26673 - 26732 2.4 40 20 Tu 1 . + CDS 26760 - 26927 124 ## ECS88_2556 hypothetical protein 41 21 Tu 1 . + CDS 27769 - 28233 147 ## COG0582 Integrase + Prom 28249 - 28308 6.8 42 22 Tu 1 . + CDS 28368 - 29651 1294 ## COG4677 Pectin methylesterase - Term 29814 - 29868 7.3 43 23 Tu 1 . - CDS 29885 - 32146 2214 ## COG1048 Aconitase A - Prom 32182 - 32241 4.7 44 24 Op 1 3/0.625 - CDS 32329 - 33762 1705 ## COG0471 Di- and tricarboxylate transporters 45 24 Op 2 . - CDS 33838 - 34890 741 ## COG2828 Uncharacterized protein conserved in bacteria - Prom 35078 - 35137 4.8 + Prom 34971 - 35030 6.7 46 25 Tu 1 . + CDS 35074 - 36027 580 ## COG0583 Transcriptional regulator + Term 36143 - 36189 5.0 - Term 36020 - 36055 6.4 47 26 Tu 1 . - CDS 36068 - 37063 950 ## COG2706 3-carboxymuconate cyclase + Prom 37054 - 37113 6.0 48 27 Tu 1 . + CDS 37218 - 38036 901 ## COG0561 Predicted hydrolases of the HAD superfamily 49 28 Op 1 13/0.000 - CDS 38037 - 39095 1106 ## COG4148 ABC-type molybdate transport system, ATPase component 50 28 Op 2 23/0.000 - CDS 39098 - 39787 648 ## COG4149 ABC-type molybdate transport system, permease component 51 28 Op 3 . - CDS 39787 - 40296 538 ## COG0725 ABC-type molybdate transport system, periplasmic component 52 28 Op 4 . - CDS 40283 - 40561 330 ## COG0725 ABC-type molybdate transport system, periplasmic component - Prom 40653 - 40712 4.3 - Term 40686 - 40721 4.5 53 29 Tu 1 . - CDS 40728 - 40877 114 ## ECSE_0815 hypothetical protein - Prom 40899 - 40958 6.1 + Prom 40825 - 40884 3.0 54 30 Op 1 4/0.500 + CDS 41006 - 41794 861 ## COG2005 N-terminal domain of molybdenum-binding protein 55 30 Op 2 . + CDS 41862 - 43334 178 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Prom 43414 - 43473 7.5 56 31 Op 1 3/0.625 + CDS 43595 - 44611 1027 ## COG1087 UDP-glucose 4-epimerase 57 31 Op 2 8/0.000 + CDS 44621 - 45667 792 ## COG1085 Galactose-1-phosphate uridylyltransferase 58 31 Op 3 6/0.000 + CDS 45671 - 46819 1120 ## COG0153 Galactokinase 59 31 Op 4 4/0.500 + CDS 46813 - 47853 1124 ## COG2017 Galactose mutarotase and related enzymes + Term 47858 - 47896 6.1 + Prom 47964 - 48023 4.1 60 32 Tu 1 . + CDS 48058 - 48810 1103 ## COG0588 Phosphoglycerate mutase 1 + Term 48831 - 48871 7.1 - Term 48823 - 48855 2.8 61 33 Tu 1 . - CDS 48968 - 50020 981 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 50061 - 50120 6.1 62 34 Tu 1 . + CDS 50336 - 50716 339 ## B21_00695 hypothetical protein + Term 50738 - 50771 2.1 + Prom 50747 - 50806 6.0 63 35 Tu 1 . + CDS 50830 - 51771 776 ## COG1230 Co/Zn/Cd efflux system component + Term 51780 - 51816 4.7 64 36 Op 1 5/0.375 - CDS 51768 - 52472 569 ## COG3201 Nicotinamide mononucleotide transporter 65 36 Op 2 . - CDS 52525 - 53568 543 ## COG0379 Quinolinate synthase - Prom 53651 - 53710 4.5 - TRNA 53973 - 54048 99.5 # Lys TTT 0 0 - TRNA 54082 - 54157 99.5 # Lys TTT 0 0 Predicted protein(s) >gi|299857034|gb|ADWS01000030.1| GENE 1 162 - 464 477 100 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0797 NR:ns ## KEGG: EC55989_0797 # Name: fI # Def: DNA packaging protein from bacteriophage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 91 14 104 144 140 100.0 1e-32 MTKDELIARLQVLGEQLNRDVSLTGTKEELVLRVAELEEELDDTDDAAGQDTSVSPENAL TGHENEVVSAQPDTVIDTAALVTVVALVTLHCSGTLNLAT >gi|299857034|gb|ADWS01000030.1| GENE 2 506 - 1186 854 226 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0796 NR:ns ## KEGG: EC55989_0796 # Name: E # Def: major head coat protein from bacteriophage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 226 125 350 350 449 100.0 1e-125 MRDEELAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAANNITQSGGTEWSKRDK STYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVKEKLDTRRGSNSELETAVKDL GEAVSYKGMYGDTAIVVYSGQYVENDVKKNFLPDNTMVLGNTQARGLRTYGCIQDADAQR EGINASARYPKNWVTTGDPAREFTMIQSAPLMLLADPDAFVSVQLA >gi|299857034|gb|ADWS01000030.1| GENE 3 1179 - 1538 455 119 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0796 NR:ns ## KEGG: EC55989_0796 # Name: E # Def: major head coat protein from bacteriophage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 105 10 114 350 215 100.0 5e-55 MSMYTTAQLLAANEQKFKFDPLFLRLFFRESYPFTTEKVYLSQIPGLVNMALYVSPIVSG EVIRSRGGSTSEFTPGYVKPKHEVNPQMTLRRLPDEDPQNLADPASGLPPPSHHPAEHA >gi|299857034|gb|ADWS01000030.1| GENE 4 1594 - 1926 311 110 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1420 NR:ns ## KEGG: ECUMN_1420 # Name: D # Def: head decoration protein from bacteriophage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 110 3 112 112 173 99.0 1e-42 MTSKETFTHYQPLGNSDPAHTATAPGGLSAKAPAMTPLMLDTSTRKLVAWDGTTDGAAVG ILAVAADQTSTTLTFYKSGTFRYEDVLWPEAASDETKKRTAFAGTAISIV >gi|299857034|gb|ADWS01000030.1| GENE 5 1936 - 3255 1220 439 aa, chain - ## HITS:1 COG:ECs1633 KEGG:ns NR:ns ## COG: ECs1633 COG0616 # Protein_GI_number: 15830887 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli O157:H7 # 1 439 1 439 439 731 98.0 0 MTAELRNLPHIASMAFNEPLMLEPAYARVFFCALAGQLGISRLADAVSGDSLTAGEAPAA LALSVDDDGPRQARSYQVMNGIAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASD PIVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSAGQLLASAASRRLV TQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHLPDDVRETLQSRMD ATRRMFAQKVSAYTGLSVQAVLDTEAAVYSGQEAIDAGLADELVNSTDAITVMRDALDAR KSRLSGGRMTKETQSTTVSATASQADVTGVVQATEGENASAAQPDVNAQITAAVAAENSR IMGILNCEEAHGREEQACVLAETPGMTVETARRILAAAPQSAQARSDTALDRLMQGAPAP LAAGNPASDAVNDLLNTPV >gi|299857034|gb|ADWS01000030.1| GENE 6 3236 - 4837 1019 533 aa, chain - ## HITS:1 COG:ECs1632 KEGG:ns NR:ns ## COG: ECs1632 COG5511 # Protein_GI_number: 15830886 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Escherichia coli O157:H7 # 1 533 1 533 533 1017 98.0 0 MKTPTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRAWNPPSESVDAALLPNFTRGNARA DDLVRNNGYAANAIQLHQDHIVGSFFRLSHRPSWRYLGIGEEEARAFSREVEAAWKEFAE DDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTSSSRLFRTQFRMVSPKRISNP NNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQKWTWIPRELPGGRASFIHVFEPV EDGQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGANS QEQRERLTGWIGEIAAYYAAAPVRLGGAKVPHLMPGDSLNLQTAQDTDNGYSVFEQSLLR YIAAGLGVSYEQLSRNYAQMSYSTARASANESWAYFMGRRKFVASRQASQMFLCWLEEAI VRRVVTLPSKARFSFQEARSAWGNCDWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECA KRGDDYQEIFAQQVRETMERRAAGLKPPAWAAAAFESGLRQSTEEEKSDSRAA >gi|299857034|gb|ADWS01000030.1| GENE 7 4834 - 5040 175 68 aa, chain - ## HITS:1 COG:no KEGG:SSON_2429 NR:ns ## KEGG: SSON_2429 # Name: not_defined # Def: putative head-tail joining protein of prophage # Organism: S.sonnei # Pathway: not_defined # 1 68 1 68 68 102 100.0 3e-21 MTRQEELAAARAALHDLMTGKRVATVQKDGRRVEFTATSVSDLKKYIAELEVQTGMTQRR RGPAGFYV >gi|299857034|gb|ADWS01000030.1| GENE 8 5037 - 6782 1559 581 aa, chain - ## HITS:1 COG:ECs1630 KEGG:ns NR:ns ## COG: ECs1630 COG5525 # Protein_GI_number: 15830884 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli O157:H7 # 1 581 61 641 641 1170 99.0 0 MNAMGSDYIREVNVVKSARIGYSKMLLGVYAYFIEHKQRNTLIWLPTDGDAENFMKTHVE PTIRDIPSLLALAPWYGKKHRDNTLTMKRFSNGRGFWCLGGKAAKNYREKSVDVAGYDEL AAFDEDIEQEGSPTFLGDKRIEGSVWPKSIRGSTPKVRGTCQIERAASESPHFMRFHVAC PHCGEEQYLKFGDKETPFGLKWTPDDPSSVFYLCEHNACVIRQQELDFTDARYICEKTGI WTRDGILWFSSSGEEIEPPDSVTFHIWTAYSPFTTWVQIVKDWMKTKGDTGKRKTFVNTT LGETWEAKIGERPDAEVMAERKEHYSAPVPDRVAYLTAGIDSQLDRYEMRVWGWGPGEES WLIDRQIIMGRHDDEQTLLRVDEAINKTYTRRNGAEMSISRICWDTGGIDPTIVYERSKK HGLFRVIPIKGASVYGKPVASMPRKRNKNGVYLTEIGTDTAKEQIYNRFTLTPEGDEPLP GAVHFPNNPDIFDLTEAQQLTAEEQVEKWVDGRKKILWDSKKRRNEALDCFVYALAALRI SISRWQLDLSALLASLQEEDGAATNKKTLADYARALSGEDE >gi|299857034|gb|ADWS01000030.1| GENE 9 6937 - 7482 352 181 aa, chain - ## HITS:1 COG:nohB KEGG:ns NR:ns ## COG: nohB COG4220 # Protein_GI_number: 16128543 # Func_class: L Replication, recombination and repair # Function: Phage DNA packaging protein, Nu1 subunit of terminase # Organism: Escherichia coli K12 # 1 181 1 181 181 326 98.0 2e-89 MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENE KLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR IAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS G >gi|299857034|gb|ADWS01000030.1| GENE 10 8161 - 8571 136 136 aa, chain + ## HITS:1 COG:ybcV KEGG:ns NR:ns ## COG: ybcV COG5562 # Protein_GI_number: 16128541 # Func_class: R General function prediction only # Function: Phage envelope protein # Organism: Escherichia coli K12 # 1 135 15 149 150 193 77.0 8e-50 MAQVAIFKQIFDKVRNNLNYHWFYSELKRHNVSHYIYYLATENIHLVLENDNTVLIKGQG KVVNVRFSKNKCLIEATLKGFKSGELSFYEYRKNLATAGVFRWITNIHENKRYYYTFDNS LLFTENIQNTTQIFPH >gi|299857034|gb|ADWS01000030.1| GENE 11 8858 - 9040 155 60 aa, chain - ## HITS:1 COG:no KEGG:ECED1_1711 NR:ns ## KEGG: ECED1_1711 # Name: not_defined # Def: conserved hypothetical protein from phage origin # Organism: E.coli_ED1a # Pathway: not_defined # 1 60 26 85 85 87 93.0 1e-16 MMEALASVDEFGEQLRLNGCVNHHFVSYMMRNSIMQAFMDMAKAERKEERRRKRAEAKAK >gi|299857034|gb|ADWS01000030.1| GENE 12 9112 - 9609 384 165 aa, chain - ## HITS:1 COG:no KEGG:ECED1_1712 NR:ns ## KEGG: ECED1_1712 # Name: not_defined # Def: conserved hypothetical protein from phage origin, putative KilA, N-terminal domain # Organism: E.coli_ED1a # Pathway: not_defined # 1 165 24 188 188 340 97.0 1e-92 MKSLTLFNQPIRIGEDGMICLTDMWKASGKSESESPYHYLRNKQTKEFLAELEKNHESVV FTERGVHGGTYGGKFVAYDYAAWLNPGFKYAAYKVLDDYFTGELQHRNSLSAQLNMKCHE FDQKKDMASFCGQGLAAWRYTKPVLVAEINSLANQLQITIPGLPG >gi|299857034|gb|ADWS01000030.1| GENE 13 9864 - 10049 122 61 aa, chain - ## HITS:1 COG:no KEGG:ECO26_0865 NR:ns ## KEGG: ECO26_0865 # Name: not_defined # Def: putative lipoprotein Rz1 precursor # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 61 1 61 61 90 95.0 2e-17 MLTRLSKVSVLMFLLGVSACKSPPPVQSLRPEPAAWAMEKAQDLQQMLNSIITVSEVEST R >gi|299857034|gb|ADWS01000030.1| GENE 14 10266 - 10763 283 165 aa, chain - ## HITS:1 COG:ybcS KEGG:ns NR:ns ## COG: ybcS COG3772 # Protein_GI_number: 16128538 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Escherichia coli K12 # 1 165 1 165 165 303 96.0 9e-83 MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDI IPGKTYTEAECKALLNKDLAMVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLL RKINQGDIKGACDQLRRWAYAGGKQWKGLMTRREIEREVCLWGQQ >gi|299857034|gb|ADWS01000030.1| GENE 15 10763 - 10978 186 71 aa, chain - ## HITS:1 COG:no KEGG:APECO1_513 NR:ns ## KEGG: APECO1_513 # Name: not_defined # Def: phage lysis protein # Organism: E.coli_APEC # Pathway: not_defined # 1 71 30 100 100 134 100.0 1e-30 MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI KEDKRKAARGE >gi|299857034|gb|ADWS01000030.1| GENE 16 11550 - 12632 1054 360 aa, chain + ## HITS:1 COG:nmpC KEGG:ns NR:ns ## COG: nmpC COG3203 # Protein_GI_number: 16128536 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 342 21 367 375 550 90.0 1e-156 MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYAR LGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYG VAYDIGAWTDVLPEFGGDTWTQTDVFMTGRTTGVATYRNNDFFGLVDGLNFAAQYQGKND RTDVTEANGDGFGFSTTYEYEGFGVGATYAKSDRTNNQVIYGNNSLNASGQNAEVWAAGL KYDANNIYLATTYSETQNMTVFGNNHIANKAQNFEVVAQYQFDFGLRPSVAYLQSKGKDL GAWGDQDLVEYIDVGATYYFNKNMSTFVDYKINLIDKSDFTKASGVATDDIVAVGMVYQF >gi|299857034|gb|ADWS01000030.1| GENE 17 12821 - 13204 300 127 aa, chain - ## HITS:1 COG:no KEGG:SSON_2441 NR:ns ## KEGG: SSON_2441 # Name: ybcQ # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 127 1 127 127 252 100.0 2e-66 MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQCCDDDAMIICGCMARL KKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMD IVVNNSN >gi|299857034|gb|ADWS01000030.1| GENE 18 13427 - 13654 257 75 aa, chain - ## HITS:1 COG:ECs1619 KEGG:ns NR:ns ## COG: ECs1619 COG4570 # Protein_GI_number: 15830873 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 75 46 120 120 152 97.0 2e-37 MLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVV KGGKLELTITELGDE >gi|299857034|gb|ADWS01000030.1| GENE 19 13786 - 14076 143 96 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_1608 NR:ns ## KEGG: ECH74115_1608 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 96 1 96 96 184 100.0 8e-46 MADLRKAARSRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDE IDRRTHFVDAAYAKECALEGMARTQVIWLKEGVIKA >gi|299857034|gb|ADWS01000030.1| GENE 20 14069 - 14239 138 56 aa, chain - ## HITS:1 COG:no KEGG:EFER_2709 NR:ns ## KEGG: EFER_2709 # Name: not_defined # Def: prophage protein NinE # Organism: E.fergusonii # Pathway: not_defined # 1 56 28 83 83 99 98.0 3e-20 MATPLIRVMNGHIYRVPNRRKRKPELKPSEIPTLLGYTASLVDKKWLRLAARRNHG >gi|299857034|gb|ADWS01000030.1| GENE 21 14239 - 14694 287 151 aa, chain - ## HITS:1 COG:no KEGG:ECSE_0581 NR:ns ## KEGG: ECSE_0581 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 151 1 151 151 316 98.0 2e-85 MNLPQDGIKLHRGNFTAIGRQIQPYLEDGKCFRMVLKPWRERRSLSQNALSHMWYSEISE YLISKGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTIQSLRHTSDLDTGEMYVFL CKVEAWAMNIGCHLTIPQSCEFQQLRDKQEA >gi|299857034|gb|ADWS01000030.1| GENE 22 14887 - 15669 53 260 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_0818 NR:ns ## KEGG: EcE24377A_0818 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 260 1 260 260 558 99.0 1e-158 MDNINKHGLSRRIPETIKRQIRQRCGFGCVICGFGFYDYEHFKPDFVDAKVHDPNGMTLL CSQCNQKRARGRLSAQTVEIADRNPKCLQAGFANEMFDFHNEPITVKFAGVTFHNCQNLI VVNEQPILSVKPSPIPHGPMLLSGIFCNSIGKETLLIDENEWKAKSDNWDVECTGPRITI RRGPGEFALVLKMEPPTGLIVERLDMLYEGVRMKGDKDLLEVSINGGPLHRWQSCSMSNC HTGLAIQGGIRAANDPLYCA >gi|299857034|gb|ADWS01000030.1| GENE 23 15844 - 16059 68 71 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0597 NR:ns ## KEGG: ECUMN_0597 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 71 132 202 202 118 84.0 8e-26 MLITYQNVTPLLQVAEHREAGRFTSIEQEYPQILNRARAILVRETAHVKLQPWQDDKWSR VLPHLPQNLFQ >gi|299857034|gb|ADWS01000030.1| GENE 24 16279 - 16518 141 79 aa, chain - ## HITS:1 COG:ybcK KEGG:ns NR:ns ## COG: ybcK COG1961 # Protein_GI_number: 16128527 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Escherichia coli K12 # 1 79 430 508 508 154 89.0 4e-38 MSSLGDFHAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKTI SAQQAISTLKYMVDGEVYF >gi|299857034|gb|ADWS01000030.1| GENE 25 18061 - 18393 237 110 aa, chain - ## HITS:1 COG:ECs1614 KEGG:ns NR:ns ## COG: ECs1614 COG2076 # Protein_GI_number: 15830868 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 187 99.0 3e-48 MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAY AIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSRSTPH >gi|299857034|gb|ADWS01000030.1| GENE 26 18461 - 18763 73 100 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0771 NR:ns ## KEGG: EC55989_0771 # Name: not_defined # Def: Ren protein from phage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 100 1 100 100 175 100.0 5e-43 MTGKEAIIHYLGTHKKFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRF ATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ >gi|299857034|gb|ADWS01000030.1| GENE 27 18760 - 19461 433 233 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_1601 NR:ns ## KEGG: ECH74115_1601 # Name: not_defined # Def: replication protein P # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 233 1 233 233 433 97.0 1e-120 MKNIAAQMVNFDREQMRRIANNMPEQYDEKPQVQQVAQIINGVFSQLLATFPASLANRDQ NELNEIRRQWVLAFWENGITTMEQVNAGMRVARRQNRPFLPSPGQFVAWCREEASVTAGL PNASELVDMVYEYCRKRGLYPDAESYPWKSNAHYWLVTNLYQNMRANALTDAELRRKAAD ELSCMTARINRGEAIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGARV >gi|299857034|gb|ADWS01000030.1| GENE 28 19458 - 20462 490 334 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0591 NR:ns ## KEGG: ECUMN_0591 # Name: not_defined # Def: replication protein O frm phage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 334 6 339 339 644 97.0 0 MAKAGLLEQNRLSGANRNTLIAGGIMANTAEIFNFPVPDAAQKEPRVADLDDGYTRIANE LLEAVMLAGLTQHQLLVFLAVMRKTYGFNKKLDWVSNEQLSELTGILPHKCSAAKSVLVK RGIFIQSGRNIGINNVVSEWSTLPESGKKNKVYLKEVNLPESGKKSLPKSGKGVYPNQVN TKDKLTKDNIKPFSSENSGESSDQPENDFPLEKLDAAIQSGSKWGTAEDLTAAEWMFNMV KTIAPSARKPNFAGWANDIRLMRERDGRNHRDMCVLFRWACQDNFWSGNVLSPAKLRDKW TQLEINRNKQQAGVTTGKSKLDLTNTDWIYGVDL >gi|299857034|gb|ADWS01000030.1| GENE 29 20474 - 21013 461 179 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0768 NR:ns ## KEGG: EC55989_0768 # Name: not_defined # Def: regulatory protein CII (modular protein) from bacteriophage origin; putative coiled-coil # Organism: E.coli_55989 # Pathway: not_defined # 1 179 1 179 179 346 100.0 2e-94 MQPLTYQQTSGFSPTAVINRSQTKQVPGHEKIRDAVRAWSAVDNQDVVATLIVNEYREQG GGTIDFPDDVSRARQKLFRFLDNKFDSEKYRNNVRELTPAILAVLPLEYRGYLVEQDSFM ARLAEMEKELSEAKQAVILNAPRHQKLKEISEGIVSMFRVDPDLAGPLMAMVTTMLGAI >gi|299857034|gb|ADWS01000030.1| GENE 30 21083 - 21313 112 76 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0589 NR:ns ## KEGG: ECUMN_0589 # Name: cro # Def: Cro # Organism: E.coli_UMN026 # Pathway: not_defined # 1 76 1 76 76 137 100.0 1e-31 MNPAIKTAINIVGSQKKLGAACEVSQQAVYKWLHNKAKVSPEHVGSIVTATGGVVKAYQI RPDLPKLFPHTEKNAA >gi|299857034|gb|ADWS01000030.1| GENE 31 21352 - 22107 345 251 aa, chain + ## HITS:1 COG:STM0898 KEGG:ns NR:ns ## COG: STM0898 COG2932 # Protein_GI_number: 16764259 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 23 251 1 231 231 160 40.0 2e-39 MVVFSQQPFSFDGIKPWLYIWTMKTTLSERLKEARLARGLTQKALGDLVGVSQAAIQKIE TGKANQTTKIVEIANALGVRAEWLSSGVGNMSDSTVQPIQSTVSHSKYFKIDVLDIEVSA GPGVINREFVEVLRSVEYSFDDARHMFDGRKAENIRIINVRGDSMSGTIEPGDLLFVDIT VKSFDGDGIYAFLYDDTAHVKRLQMMKNKLLVISDNKSYSPWDPIEKDEMNRVFIFGKVI GSMPQTYRKHG >gi|299857034|gb|ADWS01000030.1| GENE 32 22702 - 22908 196 68 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_0759 NR:ns ## KEGG: ECIAI1_0759 # Name: not_defined # Def: putative prophage Kil protein (modular protein) # Organism: E.coli_IAI1 # Pathway: not_defined # 1 68 69 136 136 132 100.0 4e-30 MVHQHYGTQTVNRGAVMPGMLVKHKDGTWTASANLRGRLYLHRGIERTYTRDLLVEVFLD GRGNGLNH >gi|299857034|gb|ADWS01000030.1| GENE 33 22985 - 23281 319 98 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1389 NR:ns ## KEGG: ECUMN_1389 # Name: gam # Def: host-nuclease inhibitor protein gam from bacteriophage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 98 41 138 138 168 98.0 6e-41 MNAYYIQDRLEAQSWARHYQQIAREEKEAELADDMEKGLPQHLFESLCIDHLQRHGASKK AITRAFDDDVEFQERMAEHIRYMVETIARHQVDIDSEV >gi|299857034|gb|ADWS01000030.1| GENE 34 23287 - 24072 681 261 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0583 NR:ns ## KEGG: ECUMN_0583 # Name: not_defined # Def: recombination protein bet from phage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 261 1 261 261 527 100.0 1e-148 MSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWT KEIYAFPDKQNGIVPVVGVDGWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVT EWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCARLAFGFAGIYDKDEAERIVE NTAYTAERQPERDITPVNDETMQEINTLLIALDKTWDDDLLPLCSQIFRRDIRASSELTQ AEAVKALGFLKQKATEQKVAA >gi|299857034|gb|ADWS01000030.1| GENE 35 24225 - 24749 386 174 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0762 NR:ns ## KEGG: EC55989_0762 # Name: not_defined # Def: exonuclease from phage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 174 53 226 226 367 99.0 1e-100 MKMSYFHTLLAEVCTGVAPEVNAKALAWGKQYENDARALFEFTSGVNVTESPIIYRDESM RTACSPDGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYF ANYDPRMKREGLHYVVIERNEKYMANFDEMVPEFIEKMDVALAEIGFVFGEQWR >gi|299857034|gb|ADWS01000030.1| GENE 36 24901 - 25092 109 63 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0761 NR:ns ## KEGG: EC55989_0761 # Name: not_defined # Def: conserved hypothetical protein from phage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 63 1 63 63 98 100.0 9e-20 MHKASPVELRTSIEMAHSLAQNGVRFVPIPVETDEEFHTLAASLSQKLEMMVAKAEADER DQV >gi|299857034|gb|ADWS01000030.1| GENE 37 25169 - 25384 195 71 aa, chain + ## HITS:1 COG:no KEGG:ECB_00489 NR:ns ## KEGG: ECB_00489 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 71 34 104 104 143 100.0 2e-33 MTPQQENALRSIARQANSEIKKARQQFPDKNVDDICRSVLKKHRETVTLMGFTPTHLSLA IGMLNGVFKER >gi|299857034|gb|ADWS01000030.1| GENE 38 25483 - 25704 148 73 aa, chain + ## HITS:1 COG:ECs0805 KEGG:ns NR:ns ## COG: ECs0805 COG1734 # Protein_GI_number: 15830059 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Escherichia coli O157:H7 # 1 73 1 73 73 114 98.0 6e-26 MADIIDSASEIEELQRNTAIKMRRLNHQAISATHCCECGDPIDERRRLVVQGCRTCASCQ EDLELISKQRGSK >gi|299857034|gb|ADWS01000030.1| GENE 39 25915 - 26445 126 176 aa, chain - ## HITS:1 COG:no KEGG:G2583_0942 NR:ns ## KEGG: G2583_0942 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 176 25 200 200 334 98.0 7e-91 MKKDSYPYLICMTVSGLIFIFLFFWWRADIYRVTFLNQSISHYYILFSMGIAFLLSLFWV KKGIVKQRGWKSLSAYLKVYAGMCIFAGFFLIIPLTTLTYFLPGETSSYVAPYRYTSGSS KSCSGAEVDDPDLHENIRICYPYGNYEYDNIIYVEKKINILGAVVTYAQTARDDTE >gi|299857034|gb|ADWS01000030.1| GENE 40 26760 - 26927 124 55 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2556 NR:ns ## KEGG: ECS88_2556 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 55 1 55 55 100 98.0 2e-20 MHFRVTGEWNGEPFNRVIEAENISDCYDHWMLWAQIAHADVTNIRIEELKEHQAA >gi|299857034|gb|ADWS01000030.1| GENE 41 27769 - 28233 147 154 aa, chain + ## HITS:1 COG:Z0946 KEGG:ns NR:ns ## COG: Z0946 COG0582 # Protein_GI_number: 15800482 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 EDL933 # 1 154 134 287 287 303 99.0 9e-83 MELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHVDALGISMKETLDKC KEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQI SDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK >gi|299857034|gb|ADWS01000030.1| GENE 42 28368 - 29651 1294 427 aa, chain + ## HITS:1 COG:ybhC KEGG:ns NR:ns ## COG: ybhC COG4677 # Protein_GI_number: 16128740 # Func_class: G Carbohydrate transport and metabolism # Function: Pectin methylesterase # Organism: Escherichia coli K12 # 1 427 1 427 427 823 100.0 0 MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFA SLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPG EYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWY MYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQV QINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEF RVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIR DSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSK VVAEAKK >gi|299857034|gb|ADWS01000030.1| GENE 43 29885 - 32146 2214 753 aa, chain - ## HITS:1 COG:ybhJ KEGG:ns NR:ns ## COG: ybhJ COG1048 # Protein_GI_number: 16128739 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 753 9 761 761 1550 99.0 0 MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDS LASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGG IFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDI DYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSV DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIA LPFHPSNVYKIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGC SGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAF CGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLK VCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAG NVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIA EEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP VTEITLYMESLTAEEREIIKAGSLINFNKNRQM >gi|299857034|gb|ADWS01000030.1| GENE 44 32329 - 33762 1705 477 aa, chain - ## HITS:1 COG:ybhI KEGG:ns NR:ns ## COG: ybhI COG0471 # Protein_GI_number: 16128738 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli K12 # 1 477 1 477 477 798 100.0 0 MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIA VAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKI GNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLM MSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVI YTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAI VVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFD GHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYG GMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML >gi|299857034|gb|ADWS01000030.1| GENE 45 33838 - 34890 741 350 aa, chain - ## HITS:1 COG:ybhH KEGG:ns NR:ns ## COG: ybhH COG2828 # Protein_GI_number: 16128737 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 350 1 350 350 678 100.0 0 MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKV AIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVR IRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQ IDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGL GDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIV PSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP >gi|299857034|gb|ADWS01000030.1| GENE 46 35074 - 36027 580 317 aa, chain + ## HITS:1 COG:ybhD KEGG:ns NR:ns ## COG: ybhD COG0583 # Protein_GI_number: 16128736 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 317 22 338 338 647 99.0 0 MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLT KAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYP NIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKK QLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGIS ALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDN LWTNIVERQRHALQEIG >gi|299857034|gb|ADWS01000030.1| GENE 47 36068 - 37063 950 331 aa, chain - ## HITS:1 COG:ybhE KEGG:ns NR:ns ## COG: ybhE COG2706 # Protein_GI_number: 16128735 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Escherichia coli K12 # 1 331 1 331 331 679 100.0 0 MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRV LAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV DVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHIS VYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH >gi|299857034|gb|ADWS01000030.1| GENE 48 37218 - 38036 901 272 aa, chain + ## HITS:1 COG:ECs0794 KEGG:ns NR:ns ## COG: ECs0794 COG0561 # Protein_GI_number: 15830048 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 272 1 272 272 554 99.0 1e-158 MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALD TPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGH VIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELG LECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAM GNADDAVKARANIVIGDNTTDSIAQFIYSHLI >gi|299857034|gb|ADWS01000030.1| GENE 49 38037 - 39095 1106 352 aa, chain - ## HITS:1 COG:ECs0793 KEGG:ns NR:ns ## COG: ECs0793 COG4148 # Protein_GI_number: 15830047 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 352 1 352 352 667 99.0 0 MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGR VLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMAKSMVDQFDKLVALLGIEP LLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINI PMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVL EHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKV VNSYDDNGQVEVELEVGGKTLWARISPWARDELVIKPGLWLYAQIKSVSITA >gi|299857034|gb|ADWS01000030.1| GENE 50 39098 - 39787 648 229 aa, chain - ## HITS:1 COG:ECs0792 KEGG:ns NR:ns ## COG: ECs0792 COG4149 # Protein_GI_number: 15830046 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 370 100.0 1e-102 MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPV VVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDV KLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRT IPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR >gi|299857034|gb|ADWS01000030.1| GENE 51 39787 - 40296 538 169 aa, chain - ## HITS:1 COG:ECs0791 KEGG:ns NR:ns ## COG: ECs0791 COG0725 # Protein_GI_number: 15830045 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 3 169 91 257 257 310 97.0 1e-84 MRLNKKAIDTASRQTLLGNSLVVVAPKASEQKDFIIDSKTNWTSLLNGGRLAVGDPEHVP AGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVVSKGVKVVA TFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK >gi|299857034|gb|ADWS01000030.1| GENE 52 40283 - 40561 330 92 aa, chain - ## HITS:1 COG:ECs0791 KEGG:ns NR:ns ## COG: ECs0791 COG0725 # Protein_GI_number: 15830045 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 92 1 92 257 157 97.0 4e-39 MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSF ASSSTLARQIEAGAPADLFISADQKWMDYAVE >gi|299857034|gb|ADWS01000030.1| GENE 53 40728 - 40877 114 49 aa, chain - ## HITS:1 COG:no KEGG:ECSE_0815 NR:ns ## KEGG: ECSE_0815 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 49 3 51 51 77 100.0 1e-13 MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH >gi|299857034|gb|ADWS01000030.1| GENE 54 41006 - 41794 861 262 aa, chain + ## HITS:1 COG:ECs0789 KEGG:ns NR:ns ## COG: ECs0789 COG2005 # Protein_GI_number: 15830043 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 451 100.0 1e-127 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSE HILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISR FSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLI LLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATS LQQGQNVTAYFNADSVIIATLC >gi|299857034|gb|ADWS01000030.1| GENE 55 41862 - 43334 178 490 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 276 465 21 199 311 73 28 3e-12 MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSALARALVGELPLLKGER QSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTTAEIIQDEVKDAPRCMQLA QQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLAS LHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSEQLEGV QLPEPDEPSARHALPTNEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKS TLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTTVRNVIL SGYFDSIGIYQAVSDRQQKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHP TLLILDEPLQGLDPLNRQLIRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGG LYRYVLTKIY >gi|299857034|gb|ADWS01000030.1| GENE 56 43595 - 44611 1027 338 aa, chain + ## HITS:1 COG:galE KEGG:ns NR:ns ## COG: galE COG1087 # Protein_GI_number: 16128727 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Escherichia coli K12 # 1 338 1 338 338 706 100.0 0 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP VGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYW ADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD >gi|299857034|gb|ADWS01000030.1| GENE 57 44621 - 45667 792 348 aa, chain + ## HITS:1 COG:ECs0786 KEGG:ns NR:ns ## COG: ECs0786 COG1085 # Protein_GI_number: 15830040 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 702 99.0 0 MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVR VTGDKNPDYTRTYVFTNDFAALMSDTPDAPESNDPLMRCQSARGTSRVICFSPDHSKTLP ELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAE REDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH VLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV >gi|299857034|gb|ADWS01000030.1| GENE 58 45671 - 46819 1120 382 aa, chain + ## HITS:1 COG:ECs0785 KEGG:ns NR:ns ## COG: ECs0785 COG0153 # Protein_GI_number: 15830039 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 773 99.0 0 MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRD DRKVRVMAADYENQLDEFSLNAPIVAHENYQWANYVRGVVKHLQLRNNSFGGVDMVISGN VPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISAL GKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTLVGSEYNTRREQCETGARFFQQP ALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTVEAASALEQGDLKRMGELMAESHAS MRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGGGFGGCIVALIPEELVPAVQQAVAEQY EAKTGIKETFYVCKPSQGAGQC >gi|299857034|gb|ADWS01000030.1| GENE 59 46813 - 47853 1124 346 aa, chain + ## HITS:1 COG:galM KEGG:ns NR:ns ## COG: galM COG2017 # Protein_GI_number: 16128724 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli K12 # 1 346 1 346 346 711 100.0 0 MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPLSDGSVREALLGCASPE CYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQ NDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITYRATVDKPCPVNMTNHVYFNL DGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRK VKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYTTAPALQFYSGNFLGGTPSRGTEPY ADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEEYSSLTEYQFIAE >gi|299857034|gb|ADWS01000030.1| GENE 60 48058 - 48810 1103 250 aa, chain + ## HITS:1 COG:ECs0783 KEGG:ns NR:ns ## COG: ECs0783 COG0588 # Protein_GI_number: 15830037 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 470 100.0 1e-133 MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVL KRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFA VTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVI IAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYLGNADEIAAKA AAVANQGKAK >gi|299857034|gb|ADWS01000030.1| GENE 61 48968 - 50020 981 350 aa, chain - ## HITS:1 COG:ECs0782 KEGG:ns NR:ns ## COG: ECs0782 COG0722 # Protein_GI_number: 15830036 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 1 350 1 350 350 717 100.0 0 MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGP CSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQIN DGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLS CPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPN YSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVM VESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG >gi|299857034|gb|ADWS01000030.1| GENE 62 50336 - 50716 339 126 aa, chain + ## HITS:1 COG:no KEGG:B21_00695 NR:ns ## KEGG: B21_00695 # Name: ybgS # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 126 1 126 126 146 100.0 2e-34 MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDN NGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTK TDGTTQ >gi|299857034|gb|ADWS01000030.1| GENE 63 50830 - 51771 776 313 aa, chain + ## HITS:1 COG:ZybgR KEGG:ns NR:ns ## COG: ZybgR COG1230 # Protein_GI_number: 15800461 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Escherichia coli O157:H7 EDL933 # 4 307 2 305 311 529 99.0 1e-150 MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGSLALLADAGHMLTDTAA LLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVE GGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIWT GWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPVSLDIAELKRRMCREIPEVRNVH HVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYLMDHYQIEHATIQMEYQPCHGPDCH LNEGVSGHSHHHH >gi|299857034|gb|ADWS01000030.1| GENE 64 51768 - 52472 569 234 aa, chain - ## HITS:1 COG:pnuC KEGG:ns NR:ns ## COG: pnuC COG3201 # Protein_GI_number: 16128719 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Escherichia coli K12 # 1 234 6 239 239 391 99.0 1e-109 MQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEKISNYFFGLINVTLFGIIFFQI QLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIRWLPLPKALSWLAVCVVSIGLMTV FINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFPFWDSCMMVLSIVAMILMTRKYVENW LLWVIINVISVVIFALQGVYAMSLEYIILTFIALNGSRMWINSARERGSRALSH >gi|299857034|gb|ADWS01000030.1| GENE 65 52525 - 53568 543 347 aa, chain - ## HITS:1 COG:nadA KEGG:ns NR:ns ## COG: nadA COG0379 # Protein_GI_number: 16128718 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Escherichia coli K12 # 1 347 1 347 347 697 99.0 0 MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVMVAHYYTDPEIQQLAEE TGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEKTILMPTLQAECSLDLGCP VEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIDHLDSLGEKIIWAPDKH LGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEYPDAAILVHPESPQAIVDMADAV GSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPDKELLEAPTAGEGATCRSCAHCPWM AMNGLQSIAEALEQEGSNHEVHVDERLRERALVPLNRMLDFAATLRG Prediction of potential genes in microbial genomes Time: Sun May 15 22:35:38 2011 Seq name: gi|299857033|gb|ADWS01000031.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont30.1, whole genome shotgun sequence Length of sequence - 51506 bp Number of predicted genes - 41, with homology - 41 Number of transcription units - 24, operones - 6 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 877 573 ## COG0598 Mg2+ and Co2+ transporters + Term 979 - 1023 2.2 2 2 Tu 1 . + CDS 1430 - 2728 1042 ## COG0513 Superfamily II DNA and RNA helicases + Term 2911 - 2954 -0.2 - Term 2809 - 2846 3.1 3 3 Tu 1 . - CDS 2857 - 3792 946 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Prom 3881 - 3940 3.5 - Term 3929 - 3960 2.4 4 4 Tu 1 . - CDS 3968 - 4402 420 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 4424 - 4483 4.2 - Term 4504 - 4534 2.5 5 5 Tu 1 . - CDS 4543 - 5676 1229 ## COG3203 Outer membrane protein (porin) - Prom 5810 - 5869 9.2 - Term 5974 - 6005 3.2 6 6 Tu 1 . - CDS 6043 - 9567 3093 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 9714 - 9773 4.7 + Prom 9682 - 9741 3.0 7 7 Tu 1 . + CDS 9841 - 10107 180 ## COG3042 Putative hemolysin + Term 10333 - 10390 6.2 8 8 Op 1 . - CDS 10104 - 10538 201 ## PROTEIN SUPPORTED gi|163801140|ref|ZP_02195040.1| 50S ribosomal protein L25 - Prom 10560 - 10619 2.3 9 8 Op 2 . - CDS 10637 - 11626 1180 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 11666 - 11725 8.5 + Prom 11632 - 11691 4.4 10 9 Op 1 . + CDS 11834 - 14473 2266 ## ECIAI1_1381 hypothetical protein 11 9 Op 2 . + CDS 14470 - 14655 262 ## LF82_3556 uncharacterized protein YnbE 12 9 Op 3 . + CDS 14615 - 14989 253 ## COG3784 Uncharacterized protein conserved in bacteria + Term 15116 - 15181 14.2 - Term 15118 - 15156 6.2 13 10 Tu 1 . - CDS 15161 - 16066 540 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 16133 - 16192 4.1 + Prom 16136 - 16195 4.2 14 11 Tu 1 . + CDS 16302 - 17801 1165 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 17826 - 17852 1.0 - Term 17814 - 17840 1.0 15 12 Tu 1 . - CDS 17859 - 20132 2502 ## COG3733 Cu2+-containing amine oxidase - Prom 20295 - 20354 3.4 - Term 20321 - 20376 6.7 16 13 Tu 1 . - CDS 20380 - 22425 1496 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 22613 - 22672 8.5 + Prom 22428 - 22487 7.1 17 14 Op 1 5/0.091 + CDS 22710 - 23639 704 ## COG3396 Uncharacterized conserved protein 18 14 Op 2 5/0.091 + CDS 23651 - 23938 336 ## COG3460 Uncharacterized enzyme of phenylacetate metabolism 19 14 Op 3 4/0.182 + CDS 23947 - 24693 806 ## COG3396 Uncharacterized conserved protein 20 14 Op 4 2/0.545 + CDS 24708 - 25205 525 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme 21 14 Op 5 1/0.727 + CDS 25213 - 26283 976 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 22 14 Op 6 12/0.000 + CDS 26280 - 27047 718 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 23 14 Op 7 7/0.000 + CDS 27050 - 27835 786 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 24 14 Op 8 1/0.727 + CDS 27840 - 29264 1089 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 25 14 Op 9 1/0.727 + CDS 29254 - 29676 343 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 26 14 Op 10 1/0.727 + CDS 29676 - 30881 1111 ## COG0183 Acetyl-CoA acetyltransferase 27 14 Op 11 2/0.545 + CDS 30908 - 32221 1107 ## COG1541 Coenzyme F390 synthetase + Prom 32234 - 32293 2.4 28 15 Op 1 1/0.727 + CDS 32322 - 33272 775 ## COG3327 Phenylacetic acid-responsive transcriptional repressor 29 15 Op 2 . + CDS 33254 - 33844 529 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily + Term 33890 - 33927 5.2 + Prom 33899 - 33958 3.9 30 16 Op 1 . + CDS 34074 - 34934 752 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 34943 - 34982 6.2 31 16 Op 2 . + CDS 34998 - 37304 832 ## ECO103_1539 hypothetical protein + Prom 37334 - 37393 4.3 32 17 Tu 1 . + CDS 37475 - 38080 213 ## COG0558 Phosphatidylglycerophosphate synthase + Term 38105 - 38152 5.0 + Prom 38352 - 38411 4.5 33 18 Op 1 3/0.364 + CDS 38452 - 38976 188 ## COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 34 18 Op 2 5/0.091 + CDS 38992 - 40749 1055 ## COG0500 SAM-dependent methyltransferases 35 18 Op 3 . + CDS 40763 - 42055 423 ## COG0671 Membrane-associated phospholipid phosphatase + Term 42103 - 42147 4.1 36 19 Tu 1 . - CDS 42106 - 42711 760 ## COG1182 Acyl carrier protein phosphodiesterase - Prom 42860 - 42919 4.0 + Prom 42805 - 42864 2.3 37 20 Tu 1 . + CDS 42911 - 46813 4081 ## COG1643 HrpA-like helicases + Prom 46847 - 46906 6.5 38 21 Tu 1 . + CDS 47085 - 47885 438 ## COG1434 Uncharacterized conserved protein + Prom 47914 - 47973 5.0 39 22 Tu 1 . + CDS 48082 - 49521 1387 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 49750 - 49789 -0.0 - Term 49521 - 49554 4.4 40 23 Tu 1 . - CDS 49563 - 50564 1147 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 50710 - 50769 5.2 + Prom 50669 - 50728 2.3 41 24 Tu 1 . + CDS 50753 - 51283 270 ## COG3038 Cytochrome B561 Predicted protein(s) >gi|299857033|gb|ADWS01000031.1| GENE 1 2 - 877 573 291 aa, chain + ## HITS:1 COG:ECs1926 KEGG:ns NR:ns ## COG: ECs1926 COG0598 # Protein_GI_number: 15831180 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Escherichia coli O157:H7 # 1 291 37 327 327 595 100.0 1e-170 EAHPCWLHLNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGS TDERPDQLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTD HSSEFIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERL PWMSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMV FLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL >gi|299857033|gb|ADWS01000031.1| GENE 2 1430 - 2728 1042 432 aa, chain + ## HITS:1 COG:ECs1927 KEGG:ns NR:ns ## COG: ECs1927 COG0513 # Protein_GI_number: 15831181 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 432 26 457 457 842 99.0 0 MTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELAD QVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLD ALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAI EIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVG QSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVH VHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSILPLEAEMATL CIDGGKKAKMRPGDVLGALTGDIGLDGVDIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGK IKGKTCRVRLLK >gi|299857033|gb|ADWS01000031.1| GENE 3 2857 - 3792 946 311 aa, chain - ## HITS:1 COG:ECs1928 KEGG:ns NR:ns ## COG: ECs1928 COG0037 # Protein_GI_number: 15831182 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 639 98.0 0 MSQNQEISKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILR NLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKIVEENTYGIVKEKIPEGKT TCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDG KHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIE TMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGDLAFDREEIPLQPAGWQPEEDENQL DELRLNVVEVK >gi|299857033|gb|ADWS01000031.1| GENE 4 3968 - 4402 420 144 aa, chain - ## HITS:1 COG:ECs1997 KEGG:ns NR:ns ## COG: ECs1997 COG0589 # Protein_GI_number: 15831251 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 144 25 168 168 258 99.0 2e-69 MNRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPA MDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILEMAKKIPAHMIIIASHRPDI TTYLLGSNAAAVVRHAECSVLVVR >gi|299857033|gb|ADWS01000031.1| GENE 5 4543 - 5676 1229 377 aa, chain - ## HITS:1 COG:ompN KEGG:ns NR:ns ## COG: ompN COG3203 # Protein_GI_number: 16129338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 377 1 377 377 619 99.0 1e-177 MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYFSDNSAKDGDQSYARLG FKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGLKFADYGSFDYGRNYGVMY DIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFFGLINGLNFAVQYQGNNEGAS NGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAYTSSDRTNDQVNHTAAGGDKADA WTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVANKTQNFEVTAQYQFDFGLRPAVSFL MSKGRDLHAAGGADNPAGVDDKDLVKYADVGATYYFNKNMSTYVDYKINLLDEDDSFYAA NGISTDDIVALGLVYQF >gi|299857033|gb|ADWS01000031.1| GENE 6 6043 - 9567 3093 1174 aa, chain - ## HITS:1 COG:ECs2000_1 KEGG:ns NR:ns ## COG: ECs2000_1 COG0674 # Protein_GI_number: 15831254 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Escherichia coli O157:H7 # 1 411 1 411 411 835 99.0 0 MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSE AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIF GDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSRVPFIHFFDGFRTSHEINKIV PLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYDAVYDHVE QAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRL YRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVI GGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDVTNLSLPLPENTLPNSAKLEA LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL ISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSADEVWSRLPQEVQAVLNQKKARF YVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVER NWQALALARESVEEVPLQPVNPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALP PDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPAS LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE KINYDFFLNLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML IANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRL LDQFADKIPAELLTALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLI GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQP EVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD >gi|299857033|gb|ADWS01000031.1| GENE 7 9841 - 10107 180 88 aa, chain + ## HITS:1 COG:STM1649 KEGG:ns NR:ns ## COG: STM1649 COG3042 # Protein_GI_number: 16764993 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Salmonella typhimurium LT2 # 38 88 1 51 51 63 92.0 1e-10 MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEANCAMIGGSLSVARQLD GTAIGMCALPNGKRCSEQSLAAGSCGSY >gi|299857033|gb|ADWS01000031.1| GENE 8 10104 - 10538 201 144 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163801140|ref|ZP_02195040.1| 50S ribosomal protein L25 [Vibrio campbellii AND4] # 1 144 1 147 147 82 29 6e-15 MRTTMKKVAALVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKPVTNDKNPPEISF GEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELDNTISEMLKEGAQVD LTANQLTLATAKQTLTYKLADLMN >gi|299857033|gb|ADWS01000031.1| GENE 9 10637 - 11626 1180 329 aa, chain - ## HITS:1 COG:ECs2002 KEGG:ns NR:ns ## COG: ECs2002 COG1052 # Protein_GI_number: 15831256 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 669 100.0 0 MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANGCEAVCIFVNDDGSRPV LEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDPEAVAEHAIGMMMTLNRRI HRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLAFDPYPSAA ALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEAAFDQMKNGVMIVNTSRGALIDS QAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVIQDDVFRRLSACHNVLFTGHQAFLT AEALTSISQTTLQNLSNLEKGETCPNELV >gi|299857033|gb|ADWS01000031.1| GENE 10 11834 - 14473 2266 879 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1381 NR:ns ## KEGG: ECIAI1_1381 # Name: ydbH # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 879 1 879 879 1691 99.0 0 MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRIALDESPRITRKGLIIP DLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKLPQTEQSPAAPKTLAQWQS MLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGEKVKFQGQLKGQQLTVSELDV VAFENQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQEPSLVDAELDWQENSGQLIVLA RDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLSGRLGVKVDNWQAGLENALISGRLS VLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTGEAKQADLILYARLPAQLSGSLTDPTL AFEPGALLRSKGRVIDSLDIDEIRWPLAGVKVTQRGVDGRLQAILQAHENELGDFVLHMD GLANDFLPDAGRWQWRYWGKGSFTPMNATWDVAGKGEWHDSTITLTDLSTGFDQLQYGTM TVEKPRLILDKPVVWVRDAQHPSFSGALSLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYF LFKGDLHAGEIGPVRVNGRWDGIRLRGNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQV AFSAAPEQGFRAGGHGVLKGGSAWMPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAE VINLVTAKNITADLQGRYPWTEEEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNL SSSELVSAVNPKQFAMSGAFSGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVK DNMTAGSAINWLRYMEISRSSTKINLDNLGLLTMQANITGTSRVDGKSGTVNLNYYHEEN IFTLWRSLRFGDNLQAWLEQNARLPGNDCPQGKECEEKQ >gi|299857033|gb|ADWS01000031.1| GENE 11 14470 - 14655 262 61 aa, chain + ## HITS:1 COG:no KEGG:LF82_3556 NR:ns ## KEGG: LF82_3556 # Name: ynbE # Def: uncharacterized protein YnbE # Organism: E.coli_LF82 # Pathway: not_defined # 1 61 1 61 61 96 96.0 2e-19 MKILLAALTSSFMLAACTPRIEVAAPKEPITINMNVKIEHEIIIKADKDVEELLETRSDL F >gi|299857033|gb|ADWS01000031.1| GENE 12 14615 - 14989 253 124 aa, chain + ## HITS:1 COG:ydbL KEGG:ns NR:ns ## COG: ydbL COG3784 # Protein_GI_number: 16129344 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 16 124 2 110 110 199 99.0 2e-51 MSKSCLKLVAIFSEAMMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVAL KTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKW VRKF >gi|299857033|gb|ADWS01000031.1| GENE 13 15161 - 16066 540 301 aa, chain - ## HITS:1 COG:feaR KEGG:ns NR:ns ## COG: feaR COG2207 # Protein_GI_number: 16129345 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 301 1 301 301 609 99.0 1e-174 MNPAMDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTW QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL LPRTLLEQYFPHQKPVCAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF R >gi|299857033|gb|ADWS01000031.1| GENE 14 16302 - 17801 1165 499 aa, chain + ## HITS:1 COG:feaB KEGG:ns NR:ns ## COG: feaB COG1012 # Protein_GI_number: 16129346 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 499 2 500 500 1001 100.0 0 MTEPHVAVLSQVQQFLDRQHGLYIDGRPGPAQSEKRLAIFDPATGQEIASTADANEADVD NAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQHSEELAQLETLEQGKSIAISRAFE VGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPLMIG MWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSH PHVAKISFTGSTATGKGIARTAADHLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFL NQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVGPGMSPVAQINPLVSRAHCDKVCSF LDDAQAQQAELIRGSNGPAGEGYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVADGEEA LQLANDTEYGLTASVWTQNLSQALEYSDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRD FGPDWLDGWCETKSVCVRY >gi|299857033|gb|ADWS01000031.1| GENE 15 17859 - 20132 2502 757 aa, chain - ## HITS:1 COG:tynA KEGG:ns NR:ns ## COG: tynA COG3733 # Protein_GI_number: 16129347 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Cu2+-containing amine oxidase # Organism: Escherichia coli K12 # 1 757 1 757 757 1538 99.0 0 MGSPSLYSARKTTLALAVALSFAWQAPVFAHGGEAHMVPMDKTLKEFGADVQWDDYAQLF TLIKDGAYVKVKPGAQTAIVNGQPLALQVPVVMKDNKAWVSDTFINDVFQSGLDQTFQVE KRPHPLNALTADEIKQAVEIVKASADFKPNTRFTEISLLPPDKEAVWAFALENKPVDQPR KADVIMLDGKHIIEAVVDLQNNKLLSWQPIKDAHGMVLLDDFASVQNIINNSEEFAAAVK KRGITDAKKVITTPLTVGYFDGKDGLKQDARLLKVISYLDVGDGNYWAHPIENLVAVVDL EQKKIVKIEEGPVVPVPMTARPFDSRDRVAPAVKPMQIIEPEGKNYTITGDMIHWRNWDF HLSMNSRVGPMISTVTYNDNGTKRKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMG TLTSPIARGKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERYAGPEYKHQEMGQPNVST ERRELVVRWISTVGNYDYIFDWIFHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTR YGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKPNTAGGPRTSTMQVNQYNI GNEQDAAQKFDPGTIRLLSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHR LSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHV ARAEEWPIMPTEWVHTLLKPWNFFDETPTLGALKKDK >gi|299857033|gb|ADWS01000031.1| GENE 16 20380 - 22425 1496 681 aa, chain - ## HITS:1 COG:maoC_1 KEGG:ns NR:ns ## COG: maoC_1 COG1012 # Protein_GI_number: 16129348 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 500 1 500 500 931 99.0 0 MQQLASFLSGTWQSGRGRSRLIHHAISGEALWEVTSEGLDMAAARQFAIEKGAPALRAMT FIERAAMLKVVAKHLLSEKERFYALSAQTGATRSDSWVDIEGGIGTLFTYASLGSRELPD DTLWPEDELIPLSKEGGFAARHLLTSKSGVAVHINAFNFPCWGMLEKLAPTWLGGMPAII KPATATAQLTQAMVKSIVDSGLVPEGAISLICGSAGDLLDHLDSQDVVTFTGSAATGQML RVQPNIVAKSIPFTMEADSLNCCVLGEDVTPDQPEFALFIREVVREMTTKAGQKCTAIRR IIVPQALVNAVSDALVARLQKVVVGDPAQEGVKMGALVNAEQRADVQEKVNILLAAGCEI RLGGQADLSAAGAFFPPTLLYCPQPDETPAVHATEAFGPVATLMPAQNQQHALQLACAGG GSLAGTLVTADPQIARQFIADAARTHGRIQILNEESAKESTGHGSPLPQLLHGGPGRAGG GEELGGLRAVKHYMQRTAVQGSPTMLAAISKQWVRGAKVEEDRIHPFRKYFEELQPGDSL LTPRRTMTEADIVNFACLSGDHFYAHMDKIAAAESIFGERVVHGYFVLSAAAGLFVDAGV GPVIANYGLENLRFIEPVKPGDTIQVRLTCKRKTLKKQRSAEEKPTGVVEWAVEVFNQHQ TPVALYSILTLVARQHGDFVD >gi|299857033|gb|ADWS01000031.1| GENE 17 22710 - 23639 704 309 aa, chain + ## HITS:1 COG:ydbO KEGG:ns NR:ns ## COG: ydbO COG3396 # Protein_GI_number: 16129349 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 309 1 309 309 625 99.0 1e-179 MTQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLR RKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGRMKYSSIFNYPTLSWADIGV IGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQKQML QDAINRFWWPALMMFGPNDDNSPNSARSLAWKIKRFTNDELRQRFVDNTIPQVEMLGMTV PDPDLHFDTESGHYRFGEIDWQEFNEVINGRGICNQERLDAKRKAWEEGTWVREAALAHA QKQLARKVA >gi|299857033|gb|ADWS01000031.1| GENE 18 23651 - 23938 336 95 aa, chain + ## HITS:1 COG:ynbF KEGG:ns NR:ns ## COG: ynbF COG3460 # Protein_GI_number: 16129350 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme of phenylacetate metabolism # Organism: Escherichia coli K12 # 1 95 1 95 95 189 100.0 8e-49 MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEI VASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM >gi|299857033|gb|ADWS01000031.1| GENE 19 23947 - 24693 806 248 aa, chain + ## HITS:1 COG:ydbP KEGG:ns NR:ns ## COG: ydbP COG3396 # Protein_GI_number: 16129351 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 248 1 248 248 485 99.0 1e-137 MNQLTAYTLRLGDNCLVLSQRLGEWCGHAPELEIDLALANIGLDLLGQARNFLSYAAELA GEGDEDTLAFTRDERQFSNLLLVEQPNGNFADTIARQYFIDAWHVALFTRLMESRDPQLA AISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAIDKLWRFTAELFDADEIDIALS EEGIAVDPRTLRAAWEAEVFAGINEATLNVPQEQAYRTGGKKGLHTEHLGPMLAEMQYLQ RVLPGQQW >gi|299857033|gb|ADWS01000031.1| GENE 20 24708 - 25205 525 165 aa, chain + ## HITS:1 COG:paaD KEGG:ns NR:ns ## COG: paaD COG2151 # Protein_GI_number: 16129352 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Escherichia coli K12 # 1 165 3 167 167 325 98.0 2e-89 MQRLATIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCP ATEHLIGAIREAMTTHGFTPVQVVLQLDPAWTTDWMTPDARERLRQYGISPPAGHSCHAH LPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFDYFKCI >gi|299857033|gb|ADWS01000031.1| GENE 21 25213 - 26283 976 356 aa, chain + ## HITS:1 COG:paaE KEGG:ns NR:ns ## COG: paaE COG1018 # Protein_GI_number: 16129353 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 356 1 356 356 708 98.0 0 MTTFHSLTVAKVEPETRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSIC RSYLPGEISVAVKAIEGGRFSRYAREHIRQGMTLEVMVPQGHFGYQPQAERQGRYLAIAA GSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQALADLKDKYPQRLQLLCIFSQ ETLDSDLLHGRIDGEKLQSLGASLINFRLYDEAFICGPAAMMDETEAALKALGMPDKTIH LERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIVLNADDESILDAALRQGADLPYACK GGVCATCKCKVLRGKVAMETNYSLEPDELAAGYVLSCQALPLTSDVVVDFDAKGMA >gi|299857033|gb|ADWS01000031.1| GENE 22 26280 - 27047 718 255 aa, chain + ## HITS:1 COG:ydbS KEGG:ns NR:ns ## COG: ydbS COG1024 # Protein_GI_number: 16129354 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 1 255 1 255 255 429 98.0 1e-120 MSELIVSRQQQVLLLTLNRPAARNALNNALLTQLVNELEAAAIDTSISVCVITGNARFFA AGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAG ENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPS DLTLEYALQLASKMARHSPLALQAAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEG ISAFLQKRTPDFKGR >gi|299857033|gb|ADWS01000031.1| GENE 23 27050 - 27835 786 261 aa, chain + ## HITS:1 COG:paaG KEGG:ns NR:ns ## COG: paaG COG1024 # Protein_GI_number: 16129355 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 1 261 2 262 262 489 99.0 1e-138 MEFILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFC AGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGC DIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMI WQVVDDETLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLDTQLDLERDYQRLAGRS ADYREGVSAFLAKRSPQFTGK >gi|299857033|gb|ADWS01000031.1| GENE 24 27840 - 29264 1089 474 aa, chain + ## HITS:1 COG:ydbU KEGG:ns NR:ns ## COG: ydbU COG1250 # Protein_GI_number: 16129356 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 1 474 2 475 475 913 98.0 0 MINVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKL TAETCERTLKRLIPVTDIHALAAANLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTS SISITAIAAEVKNPERVAGLHFFNPAPVMKLVEVVSGLATAAEVVEQLCELTLSWGKQPV RCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPIGPLELTDLIGQDV NFAVTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDWRAEREAVVGLEAVSDS FSPMKVEKKSDGVTEIDDVLLIETQGETAQALATRLARPVVVIDKMAGKVVTIAAAAVNP DSATHKAIYYLQQQGKTVLQIADYPGMLIWRTVAMIINEALDALQKGVASEQDIDTAMRL GVNYPYGPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYES >gi|299857033|gb|ADWS01000031.1| GENE 25 29254 - 29676 343 140 aa, chain + ## HITS:1 COG:paaI KEGG:ns NR:ns ## COG: paaI COG2050 # Protein_GI_number: 16129357 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 140 1 140 140 254 98.0 3e-68 MSHKAWQNAHAMYENDACAKALGIDIISMDEGFAVVTMTVTVQMLNGHQSCHGGQLFSLA DTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQK TVALFRGKSHRIGGTIIGEA >gi|299857033|gb|ADWS01000031.1| GENE 26 29676 - 30881 1111 401 aa, chain + ## HITS:1 COG:paaJ KEGG:ns NR:ns ## COG: paaJ COG0183 # Protein_GI_number: 16129358 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 401 1 401 401 733 99.0 0 MREAFICDGIRTPIGRYGGALSGVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQA GEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESM SRAPFVMGKATNAFSRQAEMFDTTIGWRFVNPLMAQQFGTDSMPETAENVAELLKISRED QDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKA PFRANGVITAGNASGVNDGAAALIIASEQMAAAQGLTPRARIVAMATAGVEPRLMGLGPV PATRRVLERAGLSIHDMDVIELNEAFAAQALGVLRELGLPDDAPHVNPNGGAIALGHPLG MSGARLALAASHELHRRNGRYALCTMCIGVGQGIAMILERV >gi|299857033|gb|ADWS01000031.1| GENE 27 30908 - 32221 1107 437 aa, chain + ## HITS:1 COG:paaK KEGG:ns NR:ns ## COG: paaK COG1541 # Protein_GI_number: 16129359 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Escherichia coli K12 # 1 437 1 437 437 912 100.0 0 MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDL RKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARS LRAAGGSPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLIRDFQPDM IMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGL SEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPHDGTPLADGEHGELLFTTLTKEALPVI RYRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQL EVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRIKSMVGISTDVMIVNCGSIPR SEGKACRVFDLRNIVGA >gi|299857033|gb|ADWS01000031.1| GENE 28 32322 - 33272 775 316 aa, chain + ## HITS:1 COG:paaX KEGG:ns NR:ns ## COG: paaX COG3327 # Protein_GI_number: 16129360 # Func_class: K Transcription # Function: Phenylacetic acid-responsive transcriptional repressor # Organism: Escherichia coli K12 # 1 316 1 316 316 627 100.0 1e-179 MSKLDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLAALLEGLGFGERFVRTA LFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYRAEQPAWDGKWLLLLSEGLDK STLADVKKQLIWQGFGALAPSLMASPSQKLADVQTLLHEAGVADNVICFEAQIPLALSRA ALRARVEECWHLTEQNAMYETFIQSFRPLVPLLKEAADELTPERAFHIQLLLIHFYRRVV LKDPLLPEELLPAHWAGHTARQLCINIYQRVAPAALAFVSEKGETSVGELPAPGSLYFQR FGGLNIEQEALCQFIR >gi|299857033|gb|ADWS01000031.1| GENE 29 33254 - 33844 529 196 aa, chain + ## HITS:1 COG:paaY KEGG:ns NR:ns ## COG: paaY COG0663 # Protein_GI_number: 16129361 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli K12 # 1 196 1 196 196 388 98.0 1e-108 MPIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQD NCVMHGFPEQDTVVEEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAF VKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREVE PGRQRLVFDENLRPKQ >gi|299857033|gb|ADWS01000031.1| GENE 30 34074 - 34934 752 286 aa, chain + ## HITS:1 COG:ECs2008 KEGG:ns NR:ns ## COG: ECs2008 COG0667 # Protein_GI_number: 15831262 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 556 98.0 1e-158 MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYG PHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVL DVVNLRVIMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVC VQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLGATPMQVALA WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLDGISRE >gi|299857033|gb|ADWS01000031.1| GENE 31 34998 - 37304 832 768 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1539 NR:ns ## KEGG: ECO103_1539 # Name: ydbD # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 768 1 768 768 1506 99.0 0 MFKARICGWIGLLPLFMLSLPVQAELRCVANTVDIEPFFSAATAEDKQQVEQAINSSVNL VPFGLSASDWKVHRGDLVVEGNIESNQKLIVLGNLTVKGNISTFSLSNPWVILGNVTATN IVTDSPLLITGSINASGLVFIDSYYDNPSSIKGSINARGIFINDIIAPVVASSTNSEFMV RASDKNDTENVKKALMIINPDAYYWGLINDEDALKEIFKRSNIRMAGNVCNQMKKEALFR PKPSPELVQELQMLDEGNVAAFEGRDIATFDLAIMRTLPRLKGISANLRKQLINSNDEQT IESMARYMPDNEILELTDQQLGYQPVVLGLLDREPLSVEIMTRMSRLPDGVGPLNLALRE NLPLDIVMTLAKRDWDMIIQELYKDAWLLPESIIDGYIRSDDSSIRQVGAGGQLTYNQAM QLANDSSNNVVTSLAFKLAEMKHHGQLLRMTPQESDKVAAYLYQKFENDDDLIRVLFLAL PDNLQFNFVKRMEKKSPAYFCCRDMQVIHSDAALQRLLTRFNDPEGWSNLAKNQYLSTSM KQKIWQRALSHRKNNPKADSAAYETSADMILSELISHGEVDDQMLLNATALIRLEDWDFL ESALVSCDNLPAVVLKELQQNTPRNDIWAKFFLRQENSSRAQVDEALRVYYALDPDALAQ LDVLAKQPDRIWWSTLAKSNLTFFKFGALNNRHTPPAVLAAEIDPEWWIVAMNNPRFPVD VLKARLKRDPLLALELVNPELDLVRQLALNGKTRAIREQAMRKLDELY >gi|299857033|gb|ADWS01000031.1| GENE 32 37475 - 38080 213 201 aa, chain + ## HITS:1 COG:ECs2010 KEGG:ns NR:ns ## COG: ECs2010 COG0558 # Protein_GI_number: 15831264 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Escherichia coli O157:H7 # 1 201 3 203 203 338 98.0 3e-93 MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLVAQPILFMLLPI VLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILML FCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIAS ILLLWTAINRCRSVLLMSAER >gi|299857033|gb|ADWS01000031.1| GENE 33 38452 - 38976 188 174 aa, chain + ## HITS:1 COG:ynbB KEGG:ns NR:ns ## COG: ynbB COG4589 # Protein_GI_number: 16129370 # Func_class: R General function prediction only # Function: Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase # Organism: Escherichia coli K12 # 1 174 125 298 298 303 98.0 8e-83 MGDPSGFLHTVSAIFWGWIMTVFALSHAAWLLMLPTTNIQGGALLVLFLLALTESNDIAQ YLWGKSCGRRKVVPKVSPGKTLEGLVGGVITTMIASLIIGPLLTPLNTLQALLAGLLIGI SGFCGDVVMSAIKRDIGVKDSGKLLPGHGGLLDRIDSLIFTAPVFFYFIRYCCY >gi|299857033|gb|ADWS01000031.1| GENE 34 38992 - 40749 1055 585 aa, chain + ## HITS:1 COG:ynbC_2 KEGG:ns NR:ns ## COG: ynbC_2 COG0500 # Protein_GI_number: 16129371 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 275 585 1 311 311 631 98.0 1e-180 MENSRIHGEHFFTSSDNTALFYRHWPALQPGAKKVIVLFHRGHEHSGRLQHLVDELAMPD TVFYAWDARGHGQTSGPRGYSPSLARSVQDVDEFVRFAASDSQVGLDEVVVIAQSVGAVL VATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDR QRVASFNNDPLITRAIAVNILLDLYKTSERIIRDAAAITLPTQLLISGDDYVVHRQPQID FYQRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGP SADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGAHSAGLHLGMSTGFDSGSSLDYVYQNQ PQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGR YVLDALANEPAVSDILLRDYSELNVAQGQAMIAQRGMSGRVRFEQGDAFNPEELSALTPR PTLAIVSGLYELFPENEQVKNSLAGLANAIEPGGILIYTGQPWHPQLEMIAAVLTSHKDG KPWVMRVRSQGEMDSLVRDAGFDKCTQRIDEWGIFTVSMAVRRDN >gi|299857033|gb|ADWS01000031.1| GENE 35 40763 - 42055 423 430 aa, chain + ## HITS:1 COG:ynbD_1 KEGG:ns NR:ns ## COG: ynbD_1 COG0671 # Protein_GI_number: 16129372 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli K12 # 1 342 1 342 342 653 99.0 0 MLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDIPSQVFGWETAIPFLPWTIVPYWSL DLLYGFSLFVCSTTFEQRRLVHRLILATVMACCGFLLYPLKFSFIRPEVSGVTGWLFSQL ELFDLPYNQSPSLHIILCWLLWRHFRQHLAERWRKVCGGWFLLIAISTLTTWQHHFIDVI TGLAVGMLIDWMVPVDRRWNYQKPDQRRIKIALPYVVGAGSCIVLMELMVMIQLWWSVWL CWPVLSLLIIGRGYGGLGAITTGKDSQGKLPPAVYWLTLPCRIGMWLSMRWFCRRLEPVS KMTAGVYLGAFPRHIPAQNAVLDVTFEFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVA MLETLREEQGSVLVHCALGLSRSALVVAAWLLCYGHCKTVDEAISYIRARRSHIVLKEDH KAMLKLWENR >gi|299857033|gb|ADWS01000031.1| GENE 36 42106 - 42711 760 201 aa, chain - ## HITS:1 COG:acpD KEGG:ns NR:ns ## COG: acpD COG1182 # Protein_GI_number: 16129373 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Escherichia coli K12 # 1 201 1 201 201 384 99.0 1e-107 MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALR PSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFR YTENGPEGLVTGKKAIVITSRGGLHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYG PEMAAKAQSDAKAAIDSIVAA >gi|299857033|gb|ADWS01000031.1| GENE 37 42911 - 46813 4081 1300 aa, chain + ## HITS:1 COG:hrpA KEGG:ns NR:ns ## COG: hrpA COG1643 # Protein_GI_number: 16129374 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Escherichia coli K12 # 20 1300 1 1281 1281 2543 99.0 0 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGE REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ ASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDW HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEK VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG >gi|299857033|gb|ADWS01000031.1| GENE 38 47085 - 47885 438 266 aa, chain + ## HITS:1 COG:ydcF KEGG:ns NR:ns ## COG: ydcF COG1434 # Protein_GI_number: 16129375 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 266 1 266 266 550 100.0 1e-156 MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAGNAVMPTIDAACKIARD QQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIE DQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRMTGDNPDAPRWLSYP GFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVDFP AEVIHAWQTLKHDAVLIEAMESRSLR >gi|299857033|gb|ADWS01000031.1| GENE 39 48082 - 49521 1387 479 aa, chain + ## HITS:1 COG:ECs2021 KEGG:ns NR:ns ## COG: ECs2021 COG1012 # Protein_GI_number: 15831275 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 479 1 479 479 944 99.0 0 MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEW EALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWAR RYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF TPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAT AAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQ FVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEG KGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNL NVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS >gi|299857033|gb|ADWS01000031.1| GENE 40 49563 - 50564 1147 333 aa, chain - ## HITS:1 COG:ECs2022 KEGG:ns NR:ns ## COG: ECs2022 COG0057 # Protein_GI_number: 15831276 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 333 1 333 333 640 99.0 0 MSKVGINGFGRIGRLVLRRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDF TEDSLIVDGKSISVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLIS APAGEMKTIVYNVNDDTLDGNDTIVSVASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYT GTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIGLVIPELSGKLKGHAQRVPVKTGSV TELVSILGKKVTAEEVNNALKQATTNNESFGYTDEEIVSSDIIGSHFGSVFDATQTEITA VGDLQLVKTVAWYDNEYGFVTQLIRTLEKFAKL >gi|299857033|gb|ADWS01000031.1| GENE 41 50753 - 51283 270 176 aa, chain + ## HITS:1 COG:STM1639 KEGG:ns NR:ns ## COG: STM1639 COG3038 # Protein_GI_number: 16764983 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Salmonella typhimurium LT2 # 1 175 1 175 176 281 84.0 3e-76 MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMVHVSCGISILVLMVVRL LLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGLVMMYNRGNPWFAFGLTMP YASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHYFWKDNTLLRMMPRKRS Prediction of potential genes in microbial genomes Time: Sun May 15 22:36:19 2011 Seq name: gi|299857032|gb|ADWS01000032.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont31.1, whole genome shotgun sequence Length of sequence - 48925 bp Number of predicted genes - 37, with homology - 37 Number of transcription units - 22, operones - 9 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 1 - 1548 99.0 # CP000946 [D:1183661..1186643] # 23S ribosomal RNA # Escherichia coli ATCC 8739 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. - TRNA 1655 - 1730 88.8 # Ala TGC 0 0 - TRNA 1773 - 1849 88.4 # Ile GAT 0 0 - SSU_RRNA 1918 - 3459 99.0 # CP000266 [D:214329..215870] # 16S ribosomal RNA # Shigella flexneri 5 str. 8401 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella. 1 1 Op 1 2/0.778 - CDS 3833 - 4690 696 ## COG0796 Glutamate racemase 2 1 Op 2 . - CDS 4635 - 6479 1580 ## COG4206 Outer membrane cobalamin receptor protein - Prom 6715 - 6774 3.3 + Prom 6764 - 6823 6.0 3 2 Tu 1 . + CDS 6848 - 7948 1158 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Term 7940 - 7980 9.3 4 3 Op 1 . - CDS 7988 - 8347 384 ## LF82_3412 inner membrane protein YijD 5 3 Op 2 . - CDS 8347 - 9051 651 ## COG1309 Transcriptional regulator - Prom 9273 - 9332 4.2 + Prom 9237 - 9296 4.2 6 4 Tu 1 . + CDS 9328 - 10728 431 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Term 10438 - 10463 -0.8 7 5 Op 1 9/0.000 - CDS 10711 - 11628 922 ## COG0583 Transcriptional regulator - Prom 11662 - 11721 5.1 8 5 Op 2 7/0.111 - CDS 11880 - 13163 1031 ## COG0477 Permeases of the major facilitator superfamily 9 5 Op 3 . - CDS 13230 - 14444 1181 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 14692 - 14751 10.5 10 6 Op 1 2/0.778 - CDS 14942 - 16315 1788 ## COG0165 Argininosuccinate lyase 11 6 Op 2 8/0.000 - CDS 16376 - 17149 1040 ## COG0548 Acetylglutamate kinase 12 6 Op 3 . - CDS 17160 - 18164 910 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Prom 18276 - 18335 6.1 + Prom 18210 - 18269 3.3 13 7 Tu 1 . + CDS 18318 - 19469 1006 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 19477 - 19519 3.5 + Prom 19554 - 19613 5.3 14 8 Tu 1 . + CDS 19860 - 22472 3102 ## COG2352 Phosphoenolpyruvate carboxylase + Term 22490 - 22523 5.2 + Prom 22570 - 22629 4.3 15 9 Tu 1 . + CDS 22655 - 24388 2059 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase + Term 24393 - 24451 4.3 + Prom 24419 - 24478 4.5 16 10 Tu 1 . + CDS 24537 - 25388 801 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 25467 - 25501 -1.0 17 11 Op 1 2/0.778 - CDS 25375 - 25716 372 ## COG1445 Phosphotransferase system fructose-specific component IIB 18 11 Op 2 11/0.000 - CDS 25718 - 26596 520 ## COG1180 Pyruvate-formate lyase-activating enzyme 19 11 Op 3 4/0.444 - CDS 26562 - 28859 2219 ## COG1882 Pyruvate-formate lyase 20 11 Op 4 7/0.111 - CDS 28910 - 29230 566 ## COG1445 Phosphotransferase system fructose-specific component IIB 21 11 Op 5 . - CDS 29245 - 30324 1306 ## COG1299 Phosphotransferase system, fructose-specific IIC component - Prom 30489 - 30548 3.3 + Prom 30389 - 30448 4.2 22 12 Op 1 2/0.778 + CDS 30633 - 33134 2525 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 23 12 Op 2 3/0.556 + CDS 33146 - 33808 798 ## COG0176 Transaldolase 24 12 Op 3 1/0.889 + CDS 33819 - 34922 1270 ## COG0371 Glycerol dehydrogenase and related enzymes + Term 35097 - 35140 3.1 + Prom 34963 - 35022 3.5 25 13 Tu 1 . + CDS 35197 - 35814 550 ## COG3738 Uncharacterized protein conserved in bacteria 26 14 Tu 1 1/0.889 - CDS 35841 - 36746 892 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 36785 - 36830 14.1 27 15 Tu 1 4/0.444 - CDS 36840 - 39020 2817 ## COG0376 Catalase (peroxidase I) - Prom 39163 - 39222 4.6 - Term 39223 - 39277 12.1 28 16 Tu 1 . - CDS 39349 - 40239 931 ## COG0685 5,10-methylenetetrahydrofolate reductase - Prom 40390 - 40449 6.0 - Term 40403 - 40437 2.2 29 17 Op 1 5/0.444 - CDS 40588 - 43020 2683 ## COG0527 Aspartokinases 30 17 Op 2 . - CDS 43023 - 44183 1169 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 44220 - 44279 4.8 + Prom 44266 - 44325 7.3 31 18 Op 1 . + CDS 44460 - 44777 438 ## COG3060 Transcriptional regulator of met regulon + Term 44787 - 44825 -0.8 32 18 Op 2 . + CDS 44837 - 45445 689 ## ECO111_4763 putative peptidoglycan peptidase 33 19 Tu 1 7/0.111 + CDS 45590 - 45862 80 ## COG3677 Transposase and inactivated derivatives 34 20 Tu 1 . + CDS 46068 - 46382 156 ## COG1662 Transposase and inactivated derivatives, IS1 family + Term 46452 - 46515 2.1 - Term 46602 - 46636 5.3 35 21 Op 1 2/0.778 - CDS 46676 - 47569 487 ## COG3209 Rhs family protein 36 21 Op 2 . - CDS 47617 - 48459 281 ## COG1413 FOG: HEAT repeat - Prom 48605 - 48664 3.0 37 22 Tu 1 . - CDS 48693 - 48830 116 ## EcolC_0233 hypothetical protein Predicted protein(s) >gi|299857032|gb|ADWS01000032.1| GENE 1 3833 - 4690 696 285 aa, chain - ## HITS:1 COG:ECs4898 KEGG:ns NR:ns ## COG: ECs4898 COG0796 # Protein_GI_number: 15834152 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Escherichia coli O157:H7 # 1 285 5 289 289 529 99.0 1e-150 MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPY GEKSEEFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKFDFPVVGVVPAIKP AARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSL DALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLE HEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFETLEKLAVLG >gi|299857032|gb|ADWS01000032.1| GENE 2 4635 - 6479 1580 614 aa, chain - ## HITS:1 COG:btuB KEGG:ns NR:ns ## COG: btuB COG4206 # Protein_GI_number: 16131804 # Func_class: H Coenzyme transport and metabolism # Function: Outer membrane cobalamin receptor protein # Organism: Escherichia coli K12 # 1 614 1 614 614 1153 99.0 0 MIKKASLLTAFSVTAFSAWAQDTSPDTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQST SVNDVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDGVRLNLAGVSGSADLSQFP IALVQRVEYIRGPRSAVYGSDAIGGVVNIITTRDEPGTEISAGWGSNSYQNYDVSTQQQL GDKTRVTLLGDYAHTHGYDVVAYGNTGTQAQTDNDGFLSKTLYGALEHNFTDAWSGFVRG YGYDNRTNYDAYYSPGSPLLDTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNYDPH YGRYDSSATLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTTPGTGYVEDGYDQRNTGI YLTGLQQVGDFTFEGAARSDDNSQFGRHGTWQTSAGWEFIEGYRFIASYGTSYKAPNLGQ LYGFYGNPNLDPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLIDYDDHTLKYYNEGKAR IKGVEATANFDTGPLTHTVSYDYVDARNAITDTPLLRRAKQQVKYQLDWQLYDFDWGITY QYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYETVYGYQ TAGREYTLSGSYTF >gi|299857032|gb|ADWS01000032.1| GENE 3 6848 - 7948 1158 366 aa, chain + ## HITS:1 COG:trmA KEGG:ns NR:ns ## COG: trmA COG2265 # Protein_GI_number: 16131803 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 366 1 366 366 738 100.0 0 MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLY HIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLRHKLFQIDYLTTLSNQAVV SLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTKIELDQDYIDERLPVAGKEMI YRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEI AKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDP PRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECG VLLTAK >gi|299857032|gb|ADWS01000032.1| GENE 4 7988 - 8347 384 119 aa, chain - ## HITS:1 COG:no KEGG:LF82_3412 NR:ns ## KEGG: LF82_3412 # Name: yijD # Def: inner membrane protein YijD # Organism: E.coli_LF82 # Pathway: not_defined # 1 119 1 119 119 222 100.0 4e-57 MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMP VGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE >gi|299857032|gb|ADWS01000032.1| GENE 5 8347 - 9051 651 234 aa, chain - ## HITS:1 COG:ECs4894 KEGG:ns NR:ns ## COG: ECs4894 COG1309 # Protein_GI_number: 15834148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 409 100.0 1e-114 MFILWYSASSTFGKDSDIVMGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREA GIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIV FSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE >gi|299857032|gb|ADWS01000032.1| GENE 6 9328 - 10728 431 466 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 7 453 4 443 458 170 26 1e-41 MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHWGTIPSKALRHAV SRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQGFYERNHCEILQGNARFV DEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTHPRIYDSDSILSMHHEPRHVL IYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEY EKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALQNIGLETDSRGQLKVNSMYQ TAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVG KTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEI IHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF >gi|299857032|gb|ADWS01000032.1| GENE 7 10711 - 11628 922 305 aa, chain - ## HITS:1 COG:ECs4890 KEGG:ns NR:ns ## COG: ECs4890 COG0583 # Protein_GI_number: 15834144 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 596 100.0 1e-170 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL PALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDKV LKQAV >gi|299857032|gb|ADWS01000032.1| GENE 8 11880 - 13163 1031 427 aa, chain - ## HITS:1 COG:ECs5316 KEGG:ns NR:ns ## COG: ECs5316 COG0477 # Protein_GI_number: 15834570 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 2 426 21 447 453 458 56.0 1e-129 MDVDVSTSVAGNKPQRIRRIQTVTLVLLFMAGIVNFLDRSSLSVAGEAIRGELGLSATEF GVLLSAFSLSYGFSQLPSGILLDRFGPRIVLGAGLIFWSLMQALTGMVNSFSHFILMRIG LGIGEAPFMPAGVKSITDWYAQKERGTALGIFNSSTVIGQAIAPPALVLMQLAWGWRTMF VIIGVAGILVGICWYAWYRNRAQFVLTDEERTYLSAPVKPRPQLQFSEWLALFKHRTTWG MILGFSGVNYTGWLYIAWLPGYLQAEQGFSLAKTGWVAAIPFLAAAVGMWVNGIVVDRLA KKGYDLAKTRKTAIVCGLMMSALGTLLVVQSSSPAQAVAFISMALFCVHFAGTSAWGLVQ VMVSETKVASIAGIQNFGSFVFASFAPIVTGWVVDTTHSFNLALVIAACVTFTGALCYFF IVKDRIE >gi|299857032|gb|ADWS01000032.1| GENE 9 13230 - 14444 1181 404 aa, chain - ## HITS:1 COG:rspA KEGG:ns NR:ns ## COG: rspA COG4948 # Protein_GI_number: 16129539 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 404 1 404 404 813 91.0 0 MKIIAADVFVTCPGRNFVTLKITTESGLCGLGDATLNGRELSVASYLKDHLCPQLIGRDA SRIEDIWQFFYKGAYWRRGPVTMSAISAIDMALWDIKAKAANMPLYQLLGGASREGVMVY CHTTGRTIDEVLEDYAKHQQMGFKAIRVQCGVPGMQTTYGLAKGKGLAYEPATKGLWPEE QLWSSEKYLDFTPKLFEAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRLFWMEDP TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRI ADFASLYQVRTGSHGPSDLSPVCHAAALHFDLWVPNFGVQEYMGYSEQMLEVFPHSWRFE EGYMHPGDEPGLGISFDEKLAAKYPYDPAYLPVARLEDGTLWNW >gi|299857032|gb|ADWS01000032.1| GENE 10 14942 - 16315 1788 457 aa, chain - ## HITS:1 COG:argH KEGG:ns NR:ns ## COG: argH COG0165 # Protein_GI_number: 16131798 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Escherichia coli K12 # 1 456 1 456 457 881 99.0 0 MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEE ALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLW CKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDE SRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLS AAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQ GALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAA QQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLDELQKFSPVIDED VYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARLE >gi|299857032|gb|ADWS01000032.1| GENE 11 16376 - 17149 1040 257 aa, chain - ## HITS:1 COG:ECs4888 KEGG:ns NR:ns ## COG: ECs4888 COG0548 # Protein_GI_number: 15834142 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 257 2 258 258 453 100.0 1e-127 MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKK KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGH VGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSD VSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAE QLPALFNGMPMGTRILA >gi|299857032|gb|ADWS01000032.1| GENE 12 17160 - 18164 910 334 aa, chain - ## HITS:1 COG:argC KEGG:ns NR:ns ## COG: argC COG0002 # Protein_GI_number: 16131796 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Escherichia coli K12 # 1 334 1 334 334 656 100.0 0 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPL QPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGF THQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVI NATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGIL ETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKGVPALKNVVGLPFCDIGFAVQGEHL IIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI >gi|299857032|gb|ADWS01000032.1| GENE 13 18318 - 19469 1006 383 aa, chain + ## HITS:1 COG:argE KEGG:ns NR:ns ## COG: argE COG0624 # Protein_GI_number: 16131795 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli K12 # 1 383 1 383 383 798 99.0 0 MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGTRN KFNMLASCGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFI LDALRDVDVTKLKKPLYILATADEETSMAGARYFAETTALRPDCAIIGEPTSLQPVRAHK GHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQLRDNLKERYHYEAFTVPYPTLN LGHIHGGDASNRICACCELHMDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHP PIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEAPFIQTLCPTLVLGPGSINQAHQPDEY LETRFIKPTRELITQVIHHFCWH >gi|299857032|gb|ADWS01000032.1| GENE 14 19860 - 22472 3102 870 aa, chain + ## HITS:1 COG:ppc KEGG:ns NR:ns ## COG: ppc COG2352 # Protein_GI_number: 16131794 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Escherichia coli K12 # 1 870 14 883 883 1699 99.0 0 MLGKVLGETIKDALGEHILERVETIRKLSKSSRAGNDANRQELLTTLQNLSNDELLPVAR AFSQFLNLANTAEQYHSISPKGEAASNPEVIARTLRKLKNQPELSEDTIKKAVESLSLEL VLTAHPTEITRRTLIHKMVEVNACLKQLDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRK LRPSPVDEAKWGFAVVENSLWQGVPNYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDR DGNPNVTADITRHVLLLSRWKATDLFLKDIQVLVSELSMVEATPELLALVGEEGAAEPYR YLMKNLRSRLMATQAWLEARLKGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIAN GDLLDTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRE LNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEA GIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAA SWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQ GEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDLYRGYVR ENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLG AGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWP LGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQA EKEGQEPDPRVEQALMVTIAGIAAGMRNTG >gi|299857032|gb|ADWS01000032.1| GENE 15 22655 - 24388 2059 577 aa, chain + ## HITS:1 COG:yijP KEGG:ns NR:ns ## COG: yijP COG2194 # Protein_GI_number: 16131793 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 577 1 577 577 1143 99.0 0 MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTNGIRDSLLFSSLWLIPV FLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYF SLKIVLIALAYTAMAVLLWTRLRPVYIPKPWRYIVSFALLYGLILHPIAMNTFIKNKPFE KTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNENNALPPLANFKDESGNEPRTLV LVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLTVFNNVVTSRPYTIEILQQALTFAN EKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMTARNTMLTVFSRQTDKQYYMNQQRTQS AREYDTNVLKPFQDVLNDPAPKKLIIVHLLGTHIKYKYRYPENQGKFDGNTDHVPPGLSA EELESYNDYDNANLYNDHVVASLIKDFKAADPNGFLVYFSDHGEEVYDTPPHKTQGRNED NPTRHMYTIPFLLWTSEKWQATHPRDFSQDVDRKYSLAELIHTWSDLAGLSYDGYDPTRS VVNPQFKETTRWIGNPYKKNALIDYDTLPYGDQVGNQ >gi|299857032|gb|ADWS01000032.1| GENE 16 24537 - 25388 801 283 aa, chain + ## HITS:1 COG:ECs4883 KEGG:ns NR:ns ## COG: ECs4883 COG2207 # Protein_GI_number: 15834137 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 548 99.0 1e-156 MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATL VPGDVLYVAAGGWNFPQWKTPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE >gi|299857032|gb|ADWS01000032.1| GENE 17 25375 - 25716 372 113 aa, chain - ## HITS:1 COG:frwD KEGG:ns NR:ns ## COG: frwD COG1445 # Protein_GI_number: 16131791 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Escherichia coli K12 # 1 113 1 113 113 206 99.0 1e-53 MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALGTENRLADEDIRRADVA LLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVLSAPQQTHLILE >gi|299857032|gb|ADWS01000032.1| GENE 18 25718 - 26596 520 292 aa, chain - ## HITS:1 COG:ECs4881 KEGG:ns NR:ns ## COG: ECs4881 COG1180 # Protein_GI_number: 15834135 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 599 99.0 1e-171 MTSSAGQRISCNVVETRRDDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESI SGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGG VTLSGGEVLMQAEFATHFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVLFDLKIMD ATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLKIRQ IHLLPFHQYGEPKYRLLGKTWSMKEVPAPSSADVTTMREMAERAGFQVTVGG >gi|299857032|gb|ADWS01000032.1| GENE 19 26562 - 28859 2219 765 aa, chain - ## HITS:1 COG:ECs4880 KEGG:ns NR:ns ## COG: ECs4880 COG1882 # Protein_GI_number: 15834134 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli O157:H7 # 1 765 1 765 765 1545 99.0 0 MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRAKATAYILEHVEISIRD EELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFAISEEDKRIYREELFPYWE KRSMKDFINGQMTDEVKAATSTQIFSINQTDKGQGHIIIDYPRLLNHGLGELVAQMQQHC QQQPENHFYQAALLLLEASQKHILRYAELAETMAANCTDAQRREELLTIAEISRHNAEHK PQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYMLPFYQASLTQGEDPAFLKELLESL WVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLTENGRSAVNVLSFLCLDAYQSVQLPQP NLGVRTNALIDTPFLMKTAETIRLGTGIPQIFNDEVVVPAFLNRGVSLEDARDYSVVGCV ELSIPGRTYGLHDIAMFNLLKVMEICLHENEGNAALTYEGLLEQIRAKISHYITLMVEGS NICDIGHRDWAPVPLLSSFISDCLEKGRDITDGGARYNFSGVQGIGIANLSDSLHALKGM VFEQQRLSFDELLSVLKANFATPEGEKVRARLINRFEKYGNDIDEVDNISAELLRHYCKE VEKYQNPRGGYFTPGSYTVSAHVPLGSVVGATPDGRFAGEQLADGGLSPMLGQDAQGPTA VLKSVSKLDNTLLSNGTLLNVKFTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNAD TLREAQQRPQDYAGLVVRVAGYSAFFVELSKEIQDDIIRRTAHQL >gi|299857032|gb|ADWS01000032.1| GENE 20 28910 - 29230 566 106 aa, chain - ## HITS:1 COG:STM4113 KEGG:ns NR:ns ## COG: STM4113 COG1445 # Protein_GI_number: 16767378 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 106 1 106 106 160 95.0 7e-40 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGAIGLENELTAEDVASADMV ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA >gi|299857032|gb|ADWS01000032.1| GENE 21 29245 - 30324 1306 359 aa, chain - ## HITS:1 COG:frwC KEGG:ns NR:ns ## COG: frwC COG1299 # Protein_GI_number: 16131787 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 1 359 1 359 359 566 100.0 1e-161 MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGAVPDAVADPNLKKLFDI GVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAGFFGALIAGIIGGIVVHYL KKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGALTNSLTQWLQGMQQGSIVML AVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVAIAAVGICIPPLGMGLATLIGRKN FSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVIPSIMVGSVCGAVTAALVGAQCYAG WGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVLKSLARKNGSSTDEKEDDLDLDFEIN >gi|299857032|gb|ADWS01000032.1| GENE 22 30633 - 33134 2525 833 aa, chain + ## HITS:1 COG:ECs4877_1 KEGG:ns NR:ns ## COG: ECs4877_1 COG1080 # Protein_GI_number: 15834130 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli O157:H7 # 123 688 1 566 566 1097 99.0 0 MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRKGNAKSALALIGTDTLA GDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDELEPLPVSLTNLNPQIIRA RTVCSGSAGGILTPISSLDLNALGNLPAAKGVDAEQSALENGLTLVLKNIEFRLLDSDGA TSAILEAHRSLAGDTSLREHLLAGVSAGLSCAEAIVTSANHFCEEFARSSSSYLQERALD VRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTTS HTVILARSFNIPTLVGVDIDALTPWQHQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDA LREQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAP GESELYNIFCQALESANGRSIIVRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYAS LFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIPFDEKIQLGI MLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYA VQAVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRKL LNQAMACRTSLEVEHLLAQFRMTQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGR CRYPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFI IMLTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL >gi|299857032|gb|ADWS01000032.1| GENE 23 33146 - 33808 798 220 aa, chain + ## HITS:1 COG:talC KEGG:ns NR:ns ## COG: talC COG0176 # Protein_GI_number: 16131784 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli K12 # 1 220 1 220 220 382 98.0 1e-106 MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLPRLQKAIGDEGILFAQT MSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKMLKKEGITTLGTAVYSAAQGLLA ALAGAKYVAPYVNRVDAQGGDGIRTVQELQALLEMHAPESMVLAASFKTPRQALDCLLAG CESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTTRL >gi|299857032|gb|ADWS01000032.1| GENE 24 33819 - 34922 1270 367 aa, chain + ## HITS:1 COG:gldA KEGG:ns NR:ns ## COG: gldA COG0371 # Protein_GI_number: 16131783 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 1 367 14 380 380 702 100.0 0 MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFAQSTVEKSFKDAGLVVE IAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKALAHFMGVPVAIAPTIAST DAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGAPARLLAAGIGDALATWFEAR ACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVIEANTYL SGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENAPVEEIETVAALS HAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGETIHNMPGGATPDQVYAALLVADQYGQ RFLQEWE >gi|299857032|gb|ADWS01000032.1| GENE 25 35197 - 35814 550 205 aa, chain + ## HITS:1 COG:ECs4873 KEGG:ns NR:ns ## COG: ECs4873 COG3738 # Protein_GI_number: 15834127 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 418 98.0 1e-117 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYMQL TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWQLKRPDSNIDHR RVPNLETWFTRHDKTRPISKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN IGAGAQEEDVLFSWRMVGHYRYFVK >gi|299857032|gb|ADWS01000032.1| GENE 26 35841 - 36746 892 301 aa, chain - ## HITS:1 COG:yijE KEGG:ns NR:ns ## COG: yijE COG0697 # Protein_GI_number: 16131781 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 301 12 312 312 485 99.0 1e-137 MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLR GRGMRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGE RLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYTRHPR VDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLK NLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVSRKKKEAVSVKS I >gi|299857032|gb|ADWS01000032.1| GENE 27 36840 - 39020 2817 726 aa, chain - ## HITS:1 COG:ECs4871 KEGG:ns NR:ns ## COG: ECs4871 COG0376 # Protein_GI_number: 15834125 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase (peroxidase I) # Organism: Escherichia coli O157:H7 # 1 726 1 726 726 1428 100.0 0 MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVDLLNQHSNRSNPLGEDF DYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIRMAWHGAGTYRSIDGRGGA GRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFG FGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLS AAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGPTSNVGPDPEAAPIEEQGLGWAST YGSGVGADAITSGLEVVWTQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIP DPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKS RYIGPEVPKEDLIWQDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRG GDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVEKA ASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQ QLTLTAPEMTALVGGMRVLGANFDGSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESK ELFEGRDRETGEVKYTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNL DRFDLL >gi|299857032|gb|ADWS01000032.1| GENE 28 39349 - 40239 931 296 aa, chain - ## HITS:1 COG:metF KEGG:ns NR:ns ## COG: metF COG0685 # Protein_GI_number: 16131779 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Escherichia coli K12 # 1 296 1 296 296 611 100.0 1e-175 MSFFHASQRDALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTY GANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGD LPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRA ITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFD GLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRPGL >gi|299857032|gb|ADWS01000032.1| GENE 29 40588 - 43020 2683 810 aa, chain - ## HITS:1 COG:metL_1 KEGG:ns NR:ns ## COG: metL_1 COG0527 # Protein_GI_number: 16131778 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli K12 # 1 448 1 448 448 881 100.0 0 MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDMMVVSAAGSTTNQLINW LKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAFVSDLERLAALLDSGINDA VYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAERAAQPQVDEGLSYPLLQQLL VQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADP RKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSEIDLQLRCSYTPDQGSTRIER VLASGTGARIVTSHDDVCLIEFQVPASQDFKLAHKEIDQILKRAQVRPLAVGVHNDRQLL QFCYTSEVADSALKILDEAGLPGELRLRQGLALVAMVGAGVTRNPLHCHRFWQQLKGQPV EFTWQSDDGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLVLFGKGNIGSRWLELFARE QSTLSARTGFEFVLAGVVDSRRSLLSYDGLDASRALAFFNDEAVEQDEESLFLWMRAHPY DDLVVLDVTASQQLADQYLDFASHGFHVISANKLAGASDSNKYRQIHDAFEKTGRHWLYN ATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLT EPDPRDDLSGKDVMRKLVILAREAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNE QMVQRLEAAREMGLVLRYVARFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRD NPLVIRGPGAGRDVTAGAIQSDINRLAQLL >gi|299857032|gb|ADWS01000032.1| GENE 30 43023 - 44183 1169 386 aa, chain - ## HITS:1 COG:metB KEGG:ns NR:ns ## COG: metB COG0626 # Protein_GI_number: 16131777 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli K12 # 1 386 1 386 386 771 99.0 0 MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRA LAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVL FVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPA LQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYL LLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAML SFELDGDEQTLRRFLSGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLL RISTGIEDGEDLIADLENGFRAANKG >gi|299857032|gb|ADWS01000032.1| GENE 31 44460 - 44777 438 105 aa, chain + ## HITS:1 COG:ECs4867 KEGG:ns NR:ns ## COG: ECs4867 COG3060 # Protein_GI_number: 15834121 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of met regulon # Organism: Escherichia coli O157:H7 # 1 105 1 105 105 198 100.0 2e-51 MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCE AFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY >gi|299857032|gb|ADWS01000032.1| GENE 32 44837 - 45445 689 202 aa, chain + ## HITS:1 COG:no KEGG:ECO111_4763 NR:ns ## KEGG: ECO111_4763 # Name: yiiX # Def: putative peptidoglycan peptidase # Organism: E.coli_O111_H- # Pathway: not_defined # 1 202 1 202 202 366 99.0 1e-100 MKIRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKP YVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFS WSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERYGKNIPLEETVVS PQAVFDAPQLTTVAKEWPLFSW >gi|299857032|gb|ADWS01000032.1| GENE 33 45590 - 45862 80 90 aa, chain + ## HITS:1 COG:YPO0981 KEGG:ns NR:ns ## COG: YPO0981 COG3677 # Protein_GI_number: 16121285 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 86 1 86 87 120 68.0 8e-28 MVTVNLHCPRCQSVQVYRHGQNPKRHDRFRGRDCHRVFQLSYCYEPRKPGVKDQIAEMTF NGAGVRDTARTLKIGINTVIRTLKNSRHEE >gi|299857032|gb|ADWS01000032.1| GENE 34 46068 - 46382 156 104 aa, chain + ## HITS:1 COG:ECs1301 KEGG:ns NR:ns ## COG: ECs1301 COG1662 # Protein_GI_number: 15830555 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli O157:H7 # 1 59 61 119 145 86 69.0 1e-17 MLTTDEWGSYARELPKEKHLTGKIFTQHIERNNLTLRTRIKRLARRTICFSRSVELHEKV IGAFIENICSTNWSHHPSDKLSLDDYQTEYTAKDFYLILLFFLK >gi|299857032|gb|ADWS01000032.1| GENE 35 46676 - 47569 487 297 aa, chain - ## HITS:1 COG:ECs4864 KEGG:ns NR:ns ## COG: ECs4864 COG3209 # Protein_GI_number: 15834118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 297 1098 1394 1394 607 97.0 1e-173 MLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLAL ISTEGATAWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY ITQDPIGLKGGWNLYTYPLSPVNSMDPLGLYEFKSKNIDDIGIFALAMCNGESINENKEY GGLICKKQGEYLPMNPISSNDNDSVDLRNIKCPEGSERVGDYHTHGFYSDDKGNKVTKEN DVYDSLNFSSKDLTNSYMNGMGKKEYSSYLGTPNNTYLKYNPKAKGNGVTIIRQGSN >gi|299857032|gb|ADWS01000032.1| GENE 36 47617 - 48459 281 280 aa, chain - ## HITS:1 COG:ZyibA KEGG:ns NR:ns ## COG: ZyibA COG1413 # Protein_GI_number: 15804135 # Func_class: C Energy production and conversion # Function: FOG: HEAT repeat # Organism: Escherichia coli O157:H7 EDL933 # 1 280 1 280 280 514 100.0 1e-146 MSNTYQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAI EFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCK KNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAA FAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDD IIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKRS >gi|299857032|gb|ADWS01000032.1| GENE 37 48693 - 48830 116 45 aa, chain - ## HITS:1 COG:no KEGG:EcolC_0233 NR:ns ## KEGG: EcolC_0233 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ATCC8739 # Pathway: not_defined # 1 45 35 79 122 87 100.0 1e-16 MRKYESEGKYTVRNLVKNKAIALELAEIYVKNRYGQDAAEEEKPY Prediction of potential genes in microbial genomes Time: Sun May 15 22:36:43 2011 Seq name: gi|299857031|gb|ADWS01000033.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont32.1, whole genome shotgun sequence Length of sequence - 48207 bp Number of predicted genes - 43, with homology - 42 Number of transcription units - 23, operones - 13 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 1037 335 ## COG3209 Rhs family protein 2 1 Op 2 . + CDS 1125 - 1391 183 ## JW3449 hypothetical protein 3 2 Tu 1 . + CDS 1496 - 1741 97 ## COG1413 FOG: HEAT repeat + Prom 1847 - 1906 6.5 4 3 Tu 1 . + CDS 1987 - 3123 345 ## COG5433 Transposase + Prom 3267 - 3326 5.9 5 4 Op 1 . + CDS 3392 - 5629 1863 ## ECUMN_0642 bacteriophage N4 adsorption protein B 6 4 Op 2 . + CDS 5616 - 8588 2387 ## COG0457 FOG: TPR repeat 7 4 Op 3 . + CDS 8589 - 9479 546 ## EC55989_0552 hypothetical protein + Term 9490 - 9530 8.1 + Prom 9484 - 9543 2.2 8 5 Tu 1 2/0.875 + CDS 9662 - 10423 406 ## COG2207 AraC-type DNA-binding domain-containing proteins - TRNA 10469 - 10545 89.4 # Arg TCT 0 0 + Prom 10521 - 10580 1.7 9 6 Tu 1 . + CDS 10788 - 11420 289 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 10 7 Op 1 4/0.750 - CDS 11423 - 11938 207 ## COG3539 P pilus assembly protein, pilin FimA 11 7 Op 2 6/0.125 - CDS 11949 - 12956 736 ## COG3539 P pilus assembly protein, pilin FimA 12 7 Op 3 10/0.000 - CDS 12969 - 15578 1446 ## COG3188 P pilus assembly protein, porin PapC 13 7 Op 4 7/0.125 - CDS 15609 - 16301 206 ## COG3121 P pilus assembly protein, chaperone PapD - Prom 16335 - 16394 6.0 - Term 16338 - 16386 0.1 14 8 Tu 1 . - CDS 16521 - 17063 249 ## COG3539 P pilus assembly protein, pilin FimA - Prom 17307 - 17366 7.4 + Prom 17248 - 17307 5.5 15 9 Op 1 2/0.875 + CDS 17544 - 18410 867 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 16 9 Op 2 1/1.000 + CDS 18412 - 18624 297 ## COG2501 Uncharacterized conserved protein + Term 18633 - 18666 6.1 17 10 Tu 1 . + CDS 18732 - 19253 322 ## COG1988 Predicted membrane-bound metal-dependent hydrolases - Term 19242 - 19277 7.4 18 11 Tu 1 . - CDS 19289 - 20674 1797 ## COG0215 Cysteinyl-tRNA synthetase - Prom 20709 - 20768 3.6 + Prom 20668 - 20727 4.3 19 12 Op 1 8/0.125 + CDS 20848 - 21342 609 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 20 12 Op 2 5/0.125 + CDS 21345 - 22067 621 ## COG2908 Uncharacterized protein conserved in bacteria + Prom 22083 - 22142 3.4 21 13 Op 1 29/0.000 + CDS 22185 - 22694 576 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 22 13 Op 2 . + CDS 22691 - 23758 1368 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 23 14 Op 1 . - CDS 23895 - 24788 913 ## COG0549 Carbamate kinase 24 14 Op 2 . - CDS 24785 - 25600 474 ## ECSE_0545 hypothetical protein 25 14 Op 3 . - CDS 25611 - 26870 1287 ## ECO103_0491 hypothetical protein 26 14 Op 4 . - CDS 26880 - 28547 1707 ## COG0074 Succinyl-CoA synthetase, alpha subunit - Prom 28725 - 28784 4.9 + Prom 28711 - 28770 5.8 27 15 Op 1 4/0.750 + CDS 28864 - 29913 918 ## COG2055 Malate/L-lactate dehydrogenases 28 15 Op 2 4/0.750 + CDS 29935 - 31170 1023 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 29 15 Op 3 . + CDS 31181 - 31966 959 ## COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization + Term 32009 - 32040 4.1 - Term 32045 - 32078 3.1 30 16 Op 1 2/0.875 - CDS 32095 - 33240 1082 ## COG1929 Glycerate kinase 31 16 Op 2 2/0.875 - CDS 33262 - 34563 987 ## COG2233 Xanthine/uracil permeases - Term 34573 - 34605 3.0 32 17 Op 1 2/0.875 - CDS 34620 - 35981 1583 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 33 17 Op 2 . - CDS 36041 - 37495 1247 ## COG1953 Cytosine/uracil/thiamine/allantoin permeases - Prom 37550 - 37609 8.1 34 18 Op 1 8/0.125 - CDS 37664 - 38542 1043 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 35 18 Op 2 8/0.125 - CDS 38642 - 39418 772 ## COG3622 Hydroxypyruvate isomerase 36 18 Op 3 4/0.750 - CDS 39431 - 41212 2146 ## COG3960 Glyoxylate carboligase - Prom 41233 - 41292 4.7 - Term 41259 - 41289 3.0 37 19 Op 1 4/0.750 - CDS 41302 - 42117 696 ## COG1414 Transcriptional regulator 38 19 Op 2 . - CDS 42195 - 42677 507 ## COG3194 Ureidoglycolate hydrolase - Prom 42739 - 42798 4.3 + Prom 42784 - 42843 5.0 39 20 Op 1 4/0.750 + CDS 42907 - 43833 554 ## COG0583 Transcriptional regulator + Term 43844 - 43893 2.7 40 20 Op 2 . + CDS 43902 - 44996 1166 ## COG2603 Predicted ATPase + Prom 45019 - 45078 3.0 41 21 Tu 1 . + CDS 45112 - 45483 328 ## SDY_0400 hypothetical protein + Term 45590 - 45631 5.1 42 22 Tu 1 . + CDS 46759 - 46983 76 ## 43 23 Tu 1 . - CDS 46911 - 48206 783 ## COG3209 Rhs family protein Predicted protein(s) >gi|299857031|gb|ADWS01000033.1| GENE 1 3 - 1037 335 344 aa, chain + ## HITS:1 COG:rhsB KEGG:ns NR:ns ## COG: rhsB COG3209 # Protein_GI_number: 16131354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 344 1068 1411 1411 719 99.0 0 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE QMQNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNQLNEENPHQLQQ LIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNLYGYQLNPISDIDPLGL SMWEDAKSGACTNGLCGTLSAMIGPDKFDSIDSTAYDALNKINSQSICEDKEFAGLICKD NSGRYFSTAPNRGERKGSYPFNSPCPNGTEKVSAYHTHGADSHGEYWDEIFSGKDEKIVK SKDNNIKSFYLGTPSGNFKAIDNHGKEITNRKGLPNVCRVHGNM >gi|299857031|gb|ADWS01000033.1| GENE 2 1125 - 1391 183 88 aa, chain + ## HITS:1 COG:no KEGG:JW3449 NR:ns ## KEGG: JW3449 # Name: yhhH # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 88 40 127 127 172 100.0 4e-42 MRKYESEGKYTVRNLVKNKAIALELAEIYVKNRYGQDAAEEEKPYEITELTTSWVVEGTI HSDQIAGGVFIIEIGKNDGRILNFGHGK >gi|299857031|gb|ADWS01000033.1| GENE 3 1496 - 1741 97 81 aa, chain + ## HITS:1 COG:ZyibA KEGG:ns NR:ns ## COG: ZyibA COG1413 # Protein_GI_number: 15804135 # Func_class: C Energy production and conversion # Function: FOG: HEAT repeat # Organism: Escherichia coli O157:H7 EDL933 # 1 81 1 81 280 149 96.0 1e-36 MSNTYQKRKASKEYGLYNKCKKLNDDELFRLLDDRNSLKRISSARVLQLRGGQDAVRLAI EFCTDKNYIRRDIGAFILGQI >gi|299857031|gb|ADWS01000033.1| GENE 4 1987 - 3123 345 378 aa, chain + ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 378 1 378 378 766 99.0 0 MELKKLMEHISIIPDYRQTWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQ YGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKS RRRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAIPELLNMLDIKGKIITTDAMGCQKDI AEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPEHDSYAISEKSHGREEIRLHIV CDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIR NHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRK AAMDRNYLASVLAGSGLS >gi|299857031|gb|ADWS01000033.1| GENE 5 3392 - 5629 1863 745 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0642 NR:ns ## KEGG: ECUMN_0642 # Name: nfrB # Def: bacteriophage N4 adsorption protein B # Organism: E.coli_UMN026 # Pathway: not_defined # 1 745 1 745 745 1505 99.0 0 MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRRIKRKLSVYRRYPRMSY RELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPDTQRDVDEV CARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR LFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSELHGKDVPVREALAGQVPSAGVGT CFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKEKGMTEIFVRFPVVDEAKEREQRKF LQHARTSNMICVREYFPDTFSTAVRQKSRWIIGIVFQGFKTHKWTSSLTLNYFLWRDRKG AISNFVSFLAMLVMLQLLLLLAYESLWPNAWHFLSIFSGSAWLMTLLWLNFGLMVNRIVQ RVIFVTGYYGLTQGLLSVLRLFWGNLINFMANWRALKQVLQHGDPRRVAWDKTTHDFPSV TGDTRSLRPLGQILLENQVITEEQLDTALRNRVEGLRLGGSMLMQGLISAEQLAQALAEQ NGVAWESIDAWQIPSSLIAEMPASVALHYAVLPLRLENDELIVGSEDGIDPVSLAALTRK VGRKVRYVIVLRGQIVTGLRHWYARRRDHDPRAMLYNAVQHQWLTEQQTGEIWRQYVPHQ FLFAEILTTLGHINRSAINVLLLRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVS MQSLLLKAGLNTEQVAQLESENEGE >gi|299857031|gb|ADWS01000033.1| GENE 6 5616 - 8588 2387 990 aa, chain + ## HITS:1 COG:nfrA KEGG:ns NR:ns ## COG: nfrA COG0457 # Protein_GI_number: 16128551 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli K12 # 1 990 1 990 990 1844 99.0 0 MKENNLNRVIGWSGLLLTSLLSTSALADNIGTSAEELGLSDYRHFVIYPRLDKALKAQKN NDEATAIREFEYIHQQVPDNIPLTLYLAEAYRHFGHDDRARLLLEDQLKRHPGDARLERS LAAIPVEVKSVTTVEELLAQQKACDAAPTLRCRSEVGQNALRLAQLPVARAQLNDATFAA SPEGKTLRTDLLQRAIYLKQWSQADTLYNEARQQNTLSAAERRQWFDVLLAGQLDDRILA LQSQGIFTDPQSYITYATALAYRGEKARLQHYLNENKPLFTTDAQEKSWLYLLSKYSANP VQALANYTVQFADNRQYVVGATLPVLLKEGQYDAAQKLLATLPANEMLEERYAVSVATRN KAESLRLARLLYQQEPANLTRLDQLTWQLMQNEQSREAADLLLQRYPFQGDARVSQTLMA RLASLLESHPYLATPAKVAILSKPLPLAEQRQWQSQLPGIADNCPAIVRLLGDMSPSYDA AAWNRLAKCYRDTLPGVALYAWLQAEQRQPNAWQHRAVAYQAYQVEDYATALAAWQKISL HDMSNEDLLAAANTAQAAGNGAARDRWLQQAEQRGLGNNALYWWLHAQRYIPGQPELALS DLTRSINIAPSANAYVARATIYRQRHNVPAAVSDLRAALELEPNNSNIQAALGYALWDSG DIAQSREMLEQAHKGLPDDPALIRQLAYVNQRLDDMPATQHYARLVIDDIDNQALITPLT PEQNQQRFNFRRLHEEVGRRWTFSFDSSIGLRSGAMSTANNNVGGAAPGKSYRSYGQLEA EYRIGRNMLLEGDLLSVYSRVFADTGENGVMMPVKNPMSGTGLRWKPLRDQIFFLAVEQQ LPLNGQNGASDTMLRASASFFNGGKYSDEWHPNGSGWFAQNLYLDAAQYIRQDIQAWTAD YRVSWHQKVANGQTIEPYAHVQDNGYRDKGTQGAQLGGVGVRWNIWTGETHYDAWPHKVS LGVEYQHTFKAINQRNGERNNAFLTIGVHW >gi|299857031|gb|ADWS01000033.1| GENE 7 8589 - 9479 546 296 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0552 NR:ns ## KEGG: EC55989_0552 # Name: ybcH # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 296 1 296 296 581 100.0 1e-164 MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRLQGFDTLVLQWT RYGDAFTQPEQRTLLFKRAAAAQQAGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAA DLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAAHQPLLTWLNNAQRLISDVSAKPVYI SSFFAGNMSPDGYRQLLEHVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSSAPAS GIVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDTLYFSLRYLPVAHGILEY >gi|299857031|gb|ADWS01000033.1| GENE 8 9662 - 10423 406 253 aa, chain + ## HITS:1 COG:ECs0598 KEGG:ns NR:ns ## COG: ECs0598 COG2207 # Protein_GI_number: 15829852 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 452 99.0 1e-127 MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNVIELSTLNHVLITHINR NIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSKPCEAELTRV LLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPSLLK KKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYGLTP LNYLAKQRQKVMW >gi|299857031|gb|ADWS01000033.1| GENE 9 10788 - 11420 289 210 aa, chain + ## HITS:1 COG:ZfimZ KEGG:ns NR:ns ## COG: ZfimZ COG2197 # Protein_GI_number: 15800272 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 EDL933 # 1 210 22 231 231 394 100.0 1e-110 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT VSAHKSNIYGKLGLHSIVELIDYAKLYELI >gi|299857031|gb|ADWS01000033.1| GENE 10 11423 - 11938 207 171 aa, chain - ## HITS:1 COG:sfmF KEGG:ns NR:ns ## COG: sfmF COG3539 # Protein_GI_number: 16128518 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 171 1 171 171 322 97.0 3e-88 MRRALFSCFCGLLWISSGWAADPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQ LLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTIAIELRNSDR SRLALGAASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN >gi|299857031|gb|ADWS01000033.1| GENE 11 11949 - 12956 736 335 aa, chain - ## HITS:1 COG:sfmH KEGG:ns NR:ns ## COG: sfmH COG3539 # Protein_GI_number: 16128517 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 11 335 1 325 325 642 99.0 0 MKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKS GWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLNDYLLGAMSLVDSVMDIQFP PQNYILMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPL VTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAV KCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAA AAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ >gi|299857031|gb|ADWS01000033.1| GENE 12 12969 - 15578 1446 869 aa, chain - ## HITS:1 COG:ECs0594 KEGG:ns NR:ns ## COG: ECs0594 COG3188 # Protein_GI_number: 15829848 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 869 1 869 869 1720 99.0 0 MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFLLENGTSVADLSRFERG NHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFP ELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIALLSSAHGYIPPEEWDEGIPAL LLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQR AIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVRGIARTAAQLT IRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDEHDGNQQNYTIPYSTVPILQREG RFKFDLTAGDFRSGNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLG NWGAVSLDVTHARSQLADDSRHEGDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDV AYRRMEGYEYDYDYDGEHRDEPIIVNYHNLRFSRKDRLQLNISQSLNDFGSLYISGTHQK YWNTSDSDTWYQVGYTSSWVGISYSLSFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYT WENALDRAYASFNANRNSNGQNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANW QAAYGTLGVGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIEN QTGILTDWRGYAVMPYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTR IGVRALITVTQGGKPVPFGSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGNGANS RCIAHYVLPKQSLQQAVTVISAVCTHPGS >gi|299857031|gb|ADWS01000033.1| GENE 13 15609 - 16301 206 230 aa, chain - ## HITS:1 COG:sfmC KEGG:ns NR:ns ## COG: sfmC COG3121 # Protein_GI_number: 16128515 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 230 1 230 230 438 100.0 1e-123 MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNS WIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKN ALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNL QVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN >gi|299857031|gb|ADWS01000033.1| GENE 14 16521 - 17063 249 180 aa, chain - ## HITS:1 COG:ECs0592 KEGG:ns NR:ns ## COG: ECs0592 COG3539 # Protein_GI_number: 15829846 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 180 12 191 191 264 100.0 8e-71 MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTD IFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVG IEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE >gi|299857031|gb|ADWS01000033.1| GENE 15 17544 - 18410 867 288 aa, chain + ## HITS:1 COG:folD KEGG:ns NR:ns ## COG: folD COG0190 # Protein_GI_number: 16128513 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Escherichia coli K12 # 1 288 1 288 288 570 100.0 1e-162 MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEE VGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDV DGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELL LAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKV VGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE >gi|299857031|gb|ADWS01000033.1| GENE 16 18412 - 18624 297 70 aa, chain + ## HITS:1 COG:ybcJ KEGG:ns NR:ns ## COG: ybcJ COG2501 # Protein_GI_number: 16128512 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 70 8 77 77 127 100.0 7e-30 MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVS FAGHSVQVVA >gi|299857031|gb|ADWS01000033.1| GENE 17 18732 - 19253 322 173 aa, chain + ## HITS:1 COG:ybcI KEGG:ns NR:ns ## COG: ybcI COG1988 # Protein_GI_number: 16128511 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 173 1 173 173 287 98.0 5e-78 MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGF THSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWS DERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMVLMGMLWWRRR >gi|299857031|gb|ADWS01000033.1| GENE 18 19289 - 20674 1797 461 aa, chain - ## HITS:1 COG:cysS KEGG:ns NR:ns ## COG: cysS COG0215 # Protein_GI_number: 16128510 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 461 1 461 461 917 99.0 0 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK LKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAE IIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMD FVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIA QSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRS QLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLF DMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALI QLRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK >gi|299857031|gb|ADWS01000033.1| GENE 19 20848 - 21342 609 164 aa, chain + ## HITS:1 COG:ECs0587 KEGG:ns NR:ns ## COG: ECs0587 COG0652 # Protein_GI_number: 15829841 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 328 100.0 2e-90 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMK QKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGY CVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE >gi|299857031|gb|ADWS01000033.1| GENE 20 21345 - 22067 621 240 aa, chain + ## HITS:1 COG:ECs0586 KEGG:ns NR:ns ## COG: ECs0586 COG2908 # Protein_GI_number: 15829840 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 489 98.0 1e-138 MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMA AAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCT DDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVV SAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF >gi|299857031|gb|ADWS01000033.1| GENE 21 22185 - 22694 576 169 aa, chain + ## HITS:1 COG:ECs0585 KEGG:ns NR:ns ## COG: ECs0585 COG0041 # Protein_GI_number: 15829839 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 280 100.0 1e-75 MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEE NGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLA IGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA >gi|299857031|gb|ADWS01000033.1| GENE 22 22691 - 23758 1368 355 aa, chain + ## HITS:1 COG:purK KEGG:ns NR:ns ## COG: purK COG0026 # Protein_GI_number: 16128506 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Escherichia coli K12 # 1 354 1 354 355 690 98.0 0 MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTR ELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLADRSEWPAVFERLGELAIVK RRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLT HNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELA PRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNSPSVMINLIGSDVNYDWLKLPLV HLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVMWAQSKFS >gi|299857031|gb|ADWS01000033.1| GENE 23 23895 - 24788 913 297 aa, chain - ## HITS:1 COG:arcC KEGG:ns NR:ns ## COG: arcC COG0549 # Protein_GI_number: 16128505 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 297 1 297 297 548 98.0 1e-156 MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLAL QNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQP EKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVI CSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQCAIR HATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEDTLAGEAGTCISL >gi|299857031|gb|ADWS01000033.1| GENE 24 24785 - 25600 474 271 aa, chain - ## HITS:1 COG:no KEGG:ECSE_0545 NR:ns ## KEGG: ECSE_0545 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 271 1 271 271 529 99.0 1e-149 MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQ FDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETG LFGPLALAASDPLTAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAA WYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAV AIDSLLALGHTSGADTLLGFWLGQQLLQGKP >gi|299857031|gb|ADWS01000033.1| GENE 25 25611 - 26870 1287 419 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0491 NR:ns ## KEGG: ECO103_0491 # Name: ylbE # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 419 1 419 419 817 100.0 0 MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKG ACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDG NRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGI TMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAA MDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMG DSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQG ACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG >gi|299857031|gb|ADWS01000033.1| GENE 26 26880 - 28547 1707 555 aa, chain - ## HITS:1 COG:ECs0580 KEGG:ns NR:ns ## COG: ECs0580 COG0074 # Protein_GI_number: 15829834 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 555 1 555 555 1020 98.0 0 MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNAT PNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQSLTQVRRWDSACQKLSDASL ALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMI AGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISA LTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVW FASSLDEAARLACLLSRVTARRNAITPASSGFICGLYTGGTLAAEAAGLLAGHLGVEADD THHHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPALRNQLIADLGAKPQVRVLLLDVVIG FGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVS SLPEATLLAAALIRPLSPATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPV AGGNKKLARLLERLQ >gi|299857031|gb|ADWS01000033.1| GENE 27 28864 - 29913 918 349 aa, chain + ## HITS:1 COG:ylbC KEGG:ns NR:ns ## COG: ylbC COG2055 # Protein_GI_number: 16128501 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 1 349 1 349 349 706 99.0 0 MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGG TNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAI SYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQ AWGKVLDARSRNMSIPDTWAVDKNGAPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLL GLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFN QVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ >gi|299857031|gb|ADWS01000033.1| GENE 28 29935 - 31170 1023 411 aa, chain + ## HITS:1 COG:ylbB KEGG:ns NR:ns ## COG: ylbB COG0624 # Protein_GI_number: 16128500 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli K12 # 1 411 1 411 411 872 99.0 0 MITHFRQAIEETLPWLSSFGADPTGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVG NLYGRLNGTEYPQEVILSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEV VAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPR QDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVY AFSRICHQSVEKAKRMGDPLVLTFGKVEPHPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQ QLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDA QIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK >gi|299857031|gb|ADWS01000033.1| GENE 29 31181 - 31966 959 261 aa, chain + ## HITS:1 COG:ylbA KEGG:ns NR:ns ## COG: ylbA COG3257 # Protein_GI_number: 16128499 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in glyoxylate utilization # Organism: Escherichia coli K12 # 1 261 1 261 261 497 99.0 1e-141 MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFV DYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFV NAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMN MHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYG VGRGEAFSYIYSKDCNRDVEI >gi|299857031|gb|ADWS01000033.1| GENE 30 32095 - 33240 1082 381 aa, chain - ## HITS:1 COG:ECs0576 KEGG:ns NR:ns ## COG: ECs0576 COG1929 # Protein_GI_number: 15829830 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Escherichia coli O157:H7 # 1 381 1 381 381 647 98.0 0 MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNI VTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRH ALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECD PRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEIN VCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTA GGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGET NLFNSARNIACAIKIGQGIKN >gi|299857031|gb|ADWS01000033.1| GENE 31 33262 - 34563 987 433 aa, chain - ## HITS:1 COG:ECs0575 KEGG:ns NR:ns ## COG: ECs0575 COG2233 # Protein_GI_number: 15829829 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Escherichia coli O157:H7 # 1 433 3 435 435 745 99.0 0 MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFA QAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTVLIGFS GLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVM CLVLGMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPG IILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFS PFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLL FSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLA VLMDNLIPWERIE >gi|299857031|gb|ADWS01000033.1| GENE 32 34620 - 35981 1583 453 aa, chain - ## HITS:1 COG:ybbX KEGG:ns NR:ns ## COG: ybbX COG0044 # Protein_GI_number: 16128496 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli K12 # 1 453 1 453 453 941 99.0 0 MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHT HISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDA AQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELG QPVLVHCENALICDALGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHV CHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGM WEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMF GKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGA RITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ >gi|299857031|gb|ADWS01000033.1| GENE 33 36041 - 37495 1247 484 aa, chain - ## HITS:1 COG:ECs0572 KEGG:ns NR:ns ## COG: ECs0572 COG1953 # Protein_GI_number: 15829826 # Func_class: F Nucleotide transport and metabolism; H Coenzyme transport and metabolism # Function: Cytosine/uracil/thiamine/allantoin permeases # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 813 99.0 0 MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTF SIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWF GLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLLFWLVNVGIGFGGGKVL NKFTAILNPCIYIVFGGMAIWAISLVGLGPIFDYIPSGIQKAENSGFLFLVVINAVVAVW AAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDI VQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLL ICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDN GFNLTAFSVTLVAVILSLGGKFIPFMEPLSRVSWFVGVIVAFAAYALLKKRTTAEKTGEQ KTIG >gi|299857031|gb|ADWS01000033.1| GENE 34 37664 - 38542 1043 292 aa, chain - ## HITS:1 COG:ybbQ KEGG:ns NR:ns ## COG: ybbQ COG2084 # Protein_GI_number: 16128493 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli K12 # 1 292 1 292 292 551 100.0 1e-157 MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIF IMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVS GGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNI EAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLN LALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSALVQALELMANHKLA >gi|299857031|gb|ADWS01000033.1| GENE 35 38642 - 39418 772 258 aa, chain - ## HITS:1 COG:ECs0569 KEGG:ns NR:ns ## COG: ECs0569 COG3622 # Protein_GI_number: 15829823 # Func_class: G Carbohydrate transport and metabolism # Function: Hydroxypyruvate isomerase # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 550 98.0 1e-156 MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKQVLASNKLEHTLHN LPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKINCLVGKTPAGFSSEQIHA TLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQALKLIDDVGCCNLKIQYDIY HMQRMEGELTNTMTQWADKIGHLQIADNPHRGEPGTGEINYEYLFTVIENSDYNGWVGCE YKPQTTTEAGLRWMDPYR >gi|299857031|gb|ADWS01000033.1| GENE 36 39431 - 41212 2146 593 aa, chain - ## HITS:1 COG:ECs0568 KEGG:ns NR:ns ## COG: ECs0568 COG3960 # Protein_GI_number: 15829822 # Func_class: R General function prediction only # Function: Glyoxylate carboligase # Organism: Escherichia coli O157:H7 # 1 593 1 593 593 1202 99.0 0 MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEG YTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITGQAPRARLHKEDFQAVDIE AIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLVDLPFDVQVAEIEFDPDMYEP LPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMG WGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVH IDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEWVAECQQRKRTLL RKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGP LGWTIPAALGVCAADPKRNVVAISGDFDFQFLIEELAVGAQFKIPYIHVLVNNAYLGLIR QSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKA LMAQYRVPVVVEVILERVTNISMGSELDNVMEFEDIADNAADAPTETCFMHYE >gi|299857031|gb|ADWS01000033.1| GENE 37 41302 - 42117 696 271 aa, chain - ## HITS:1 COG:ECs0567 KEGG:ns NR:ns ## COG: ECs0567 COG1414 # Protein_GI_number: 15829821 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 271 1 271 271 526 99.0 1e-149 MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRL LKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVA IRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQ FTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCLASAIYDDVGSVVAAISISGPSS RLTEDRFVSQGELVRDTARDISTALGLKAHP >gi|299857031|gb|ADWS01000033.1| GENE 38 42195 - 42677 507 160 aa, chain - ## HITS:1 COG:ECs0566 KEGG:ns NR:ns ## COG: ECs0566 COG3194 # Protein_GI_number: 15829820 # Func_class: F Nucleotide transport and metabolism # Function: Ureidoglycolate hydrolase # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 331 100.0 3e-91 MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDRTLISINRAQ PANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHR NVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA >gi|299857031|gb|ADWS01000033.1| GENE 39 42907 - 43833 554 308 aa, chain + ## HITS:1 COG:ECs0565 KEGG:ns NR:ns ## COG: ECs0565 COG0583 # Protein_GI_number: 15829819 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 308 1 308 308 612 100.0 1e-175 MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTA AGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYP FTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLA NVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGF LPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFL EIFGNPRS >gi|299857031|gb|ADWS01000033.1| GENE 40 43902 - 44996 1166 364 aa, chain + ## HITS:1 COG:ybbB KEGG:ns NR:ns ## COG: ybbB COG2603 # Protein_GI_number: 16128487 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli K12 # 1 364 1 364 364 714 98.0 0 MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMNNDERAAVGTCYKQQGS DAALALGHKLVAGEIRQQRMDAWRAACLQNPQGILCCARGGQRSHIVQSWLYAAGIDYPL VEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQQQPNGVDLEGLARHRGSAFG RTLQPQLSQASFENLLAAEMLKTDARQDLRLWVLEDESRMIGSNHLPECLRERMTQAAIA VVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQEYCEYLHHGLSAIKRRLGLQRYNE LAAQLDTALTTQLTTGSTDGHLAWLVPLLKEYYDPMYRYQLEKKAEKVVFRGEWAEVAEW VKAR >gi|299857031|gb|ADWS01000033.1| GENE 41 45112 - 45483 328 123 aa, chain + ## HITS:1 COG:no KEGG:SDY_0400 NR:ns ## KEGG: SDY_0400 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 123 13 135 135 238 100.0 4e-62 MLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRR APNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGVFISDSGVRSVWLLHNLENLK RRY >gi|299857031|gb|ADWS01000033.1| GENE 42 46759 - 46983 76 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPYNGKIDQSHLNLISSYLHKYQIIYPMLFDGLVDLFFLLALHLRDLTLMDQYHSPDSAG THTDSIPPSSPIGS >gi|299857031|gb|ADWS01000033.1| GENE 43 46911 - 48206 783 431 aa, chain - ## HITS:1 COG:rhsE KEGG:ns NR:ns ## COG: rhsE COG3209 # Protein_GI_number: 16129415 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 417 98 514 682 809 96.0 0 RLHRETVRSFGSMAGSNAAYELTSTYTPAGQLQSQHLNSLVYDRDYGWNDNGDLVRISGP RQTREYGYSATGRLESVRTLAPDLDIRIPYATDPAGNRLPDPELHPDSTLTAWPDNRIAE DAHYVYHYDEYGRLTEKTDLIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQHGEPLVESR YLYDPLGRRMAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTVQTDTTRIQTVYEPG SFTPLIRVETENGEREKAQRRSLAETLQQEGSENGHGVVFPAELVRLLDRLEEEIRADRV SSESRAWLAQCGLTVEQLARQVEPEYTPARKVHFYHCDHRGLPLALISEDGNTAWSAEYD EWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPLQGRYITQDPIGLEGGMES VCVPAESGEWY Prediction of potential genes in microbial genomes Time: Sun May 15 22:37:29 2011 Seq name: gi|299857030|gb|ADWS01000034.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont33.1, whole genome shotgun sequence Length of sequence - 46618 bp Number of predicted genes - 50, with homology - 50 Number of transcription units - 27, operones - 10 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 143 60 ## COG2963 Transposase and inactivated derivatives + Prom 80 - 139 1.8 2 2 Tu 1 . + CDS 230 - 1060 763 ## COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold 3 3 Tu 1 . - CDS 1712 - 1987 88 ## ECP_2011 putative transposase - Term 3155 - 3199 1.5 4 4 Tu 1 . - CDS 3384 - 3788 206 ## ECS88_2074 hypothetical protein - Prom 3811 - 3870 4.7 + Prom 3771 - 3830 4.0 5 5 Op 1 . + CDS 3974 - 4156 149 ## ECO26_2889 putative transposase 6 5 Op 2 9/0.000 + CDS 4170 - 5192 686 ## COG4584 Transposase and inactivated derivatives 7 5 Op 3 1/0.286 + CDS 5192 - 5971 570 ## COG1484 DNA replication protein + Term 6038 - 6069 1.0 8 6 Tu 1 . + CDS 6072 - 6413 121 ## COG3547 Transposase and inactivated derivatives + Prom 6582 - 6641 1.7 9 7 Tu 1 . + CDS 6768 - 6902 69 ## ECO26_2889 putative transposase 10 8 Tu 1 . - CDS 6912 - 7304 173 ## EcHS_A2131 hypothetical protein - Term 7399 - 7444 -0.9 11 9 Tu 1 . - CDS 7470 - 8039 471 ## ECS88_4881 hypothetical protein 12 10 Op 1 . + CDS 9753 - 9959 291 ## COG3311 Predicted transcriptional regulator + Term 10003 - 10031 0.5 13 10 Op 2 . + CDS 10046 - 10648 474 ## ECO26_2894 hypothetical protein 14 11 Tu 1 . - CDS 10970 - 12454 400 ## ECUMN_4878 hypothetical protein - Prom 12646 - 12705 3.9 15 12 Tu 1 2/0.143 + CDS 13683 - 14555 674 ## COG3596 Predicted GTPase + Term 14660 - 14696 3.4 + Prom 14603 - 14662 3.3 16 13 Tu 1 . + CDS 14883 - 18002 2340 ## COG3468 Type V secretory pathway, adhesin AidA 17 14 Op 1 . + CDS 18123 - 20639 1623 ## ECO26_2902 hypothetical protein 18 14 Op 2 . + CDS 20715 - 21170 247 ## ECED1_4883 hypothetical protein + Term 21196 - 21234 7.6 19 15 Op 1 . + CDS 21249 - 21482 88 ## EC55989_3360 hypothetical protein + Term 21506 - 21544 7.1 20 15 Op 2 . + CDS 21582 - 22400 645 ## ECO26_2908 hypothetical protein 21 15 Op 3 . + CDS 22455 - 22940 454 ## ECO111_0312 hypothetical protein 22 15 Op 4 . + CDS 22956 - 23432 458 ## COG2003 DNA repair proteins 23 15 Op 5 . + CDS 23495 - 23716 316 ## EC55989_2261 conserved hypothetical protein; CP4-44 prophage 24 16 Op 1 . + CDS 23879 - 24247 204 ## ECP_0337 hypothetical protein 25 16 Op 2 . + CDS 24337 - 24714 171 ## c5149 hypothetical protein 26 16 Op 3 . + CDS 24711 - 24914 279 ## ECS88_4640 hypothetical protein + Term 25069 - 25107 5.0 - Term 25761 - 25795 6.9 27 17 Tu 1 2/0.143 - CDS 25812 - 26141 542 ## COG2926 Uncharacterized protein conserved in bacteria - Prom 26246 - 26305 3.9 28 18 Op 1 4/0.000 - CDS 26313 - 27371 898 ## COG1289 Predicted membrane protein - Prom 27497 - 27556 4.1 - Term 27444 - 27478 1.1 29 18 Op 2 3/0.000 - CDS 27569 - 28042 403 ## COG3449 DNA gyrase inhibitor - Prom 28066 - 28125 6.3 30 18 Op 3 . - CDS 28161 - 29327 945 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 29519 - 29578 2.8 + Prom 29388 - 29447 2.9 31 19 Tu 1 . + CDS 29536 - 30963 1246 ## COG2925 Exonuclease I + Term 30970 - 31009 5.8 32 20 Op 1 10/0.000 - CDS 31006 - 31233 300 ## COG0425 Predicted redox protein, regulator of disulfide bond formation 33 20 Op 2 2/0.143 - CDS 31247 - 32305 749 ## COG2391 Predicted transporter component - Prom 32418 - 32477 8.1 - Term 32415 - 32473 13.1 34 21 Op 1 4/0.000 - CDS 32484 - 33842 1506 ## COG0531 Amino acid transporters - Prom 34041 - 34100 4.2 - Term 33988 - 34020 2.3 35 21 Op 2 2/0.143 - CDS 34109 - 35038 751 ## COG0583 Transcriptional regulator 36 21 Op 3 . - CDS 35084 - 35908 766 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Term 35952 - 35989 1.5 37 22 Op 1 6/0.000 - CDS 35991 - 36245 114 ## COG4115 Uncharacterized protein conserved in bacteria 38 22 Op 2 . - CDS 36242 - 36493 287 ## COG2161 Antitoxin of toxin-antitoxin stability system - Prom 36513 - 36572 8.2 39 23 Op 1 18/0.000 + CDS 36972 - 37871 1111 ## COG0040 ATP phosphoribosyltransferase 40 23 Op 2 19/0.000 + CDS 37877 - 39181 1253 ## COG0141 Histidinol dehydrogenase 41 23 Op 3 13/0.000 + CDS 39178 - 40248 1153 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 42 23 Op 4 18/0.000 + CDS 40248 - 41315 1329 ## COG0131 Imidazoleglycerol-phosphate dehydratase 43 23 Op 5 25/0.000 + CDS 41315 - 41905 727 ## COG0118 Glutamine amidotransferase 44 23 Op 6 23/0.000 + CDS 41905 - 42642 822 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 45 23 Op 7 24/0.000 + CDS 42624 - 43400 886 ## COG0107 Imidazoleglycerol-phosphate synthase 46 23 Op 8 . + CDS 43394 - 44005 639 ## COG0139 Phosphoribosyl-AMP cyclohydrolase + Term 44010 - 44040 5.0 - Term 43998 - 44028 5.0 47 24 Tu 1 . - CDS 44110 - 44379 169 ## COG1943 Transposase and inactivated derivatives - Prom 44616 - 44675 3.8 - Term 44708 - 44736 3.0 48 25 Tu 1 . - CDS 44753 - 45733 1081 ## COG3765 Chain length determinant protein - Prom 45773 - 45832 4.4 + Prom 45777 - 45836 4.4 49 26 Tu 1 . + CDS 45936 - 46493 504 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Term 46197 - 46224 -0.8 50 27 Tu 1 . - CDS 46428 - 46616 92 ## COG1662 Transposase and inactivated derivatives, IS1 family Predicted protein(s) >gi|299857030|gb|ADWS01000034.1| GENE 1 2 - 143 60 47 aa, chain - ## HITS:1 COG:b0298 KEGG:ns NR:ns ## COG: b0298 COG2963 # Protein_GI_number: 16128283 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 47 4 50 102 62 100.0 3e-10 MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLY >gi|299857030|gb|ADWS01000034.1| GENE 2 230 - 1060 763 276 aa, chain + ## HITS:1 COG:STM3550 KEGG:ns NR:ns ## COG: STM3550 COG1735 # Protein_GI_number: 16766836 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Salmonella typhimurium LT2 # 1 276 69 344 344 497 88.0 1e-141 MDRKPIEDVIFEINNFISLGGRTIVDATGSESIGRDAQALREVALKTGLNIVASSGPYLE KFESQRIHKTVDELAATIDKELNQGIGDTDIRAGMIGEIGVSPTFTEAEHNSLRAASLAQ INNPHVAMNIHMPGWLRRGDEVLDIVLGEMGVSPNKVSLAHSDPSGKDVAYQRKMLDKGV WLEFDMIGLDITFPKEGIAPGVQETADAVAHLIELGYADQLVLSHDVFLKQMWAKNGGNG WGFVPDVFLAYLAERGVDKTILKKLCIDNPGRLLTA >gi|299857030|gb|ADWS01000034.1| GENE 3 1712 - 1987 88 91 aa, chain - ## HITS:1 COG:no KEGG:ECP_2011 NR:ns ## KEGG: ECP_2011 # Name: not_defined # Def: putative transposase # Organism: E.coli_536 # Pathway: not_defined # 9 91 203 285 285 158 98.0 4e-38 MAGNGGPGGGTGSETIVRDTVAKWRKGWNPPVTTAARLPSVFRVSRWLMPWRIIRGEENY ASRFISLMCEKEPELKIAQQLVLEFYRILKT >gi|299857030|gb|ADWS01000034.1| GENE 4 3384 - 3788 206 134 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2074 NR:ns ## KEGG: ECS88_2074 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 130 30 159 165 256 94.0 1e-67 MRILNCYMANDSKGHFVTAKEAAKHNRQDVLCCVSCGCPLTLKRGNDGQPPWFEHDQMTV AAKILLRCTWLDPAEKEARRLHLQGMTVPDYTVKVRKWFCVMCDEDYEGEKCCPRCGTGV YSRDRGAAGGQLEG >gi|299857030|gb|ADWS01000034.1| GENE 5 3974 - 4156 149 60 aa, chain + ## HITS:1 COG:no KEGG:ECO26_2889 NR:ns ## KEGG: ECO26_2889 # Name: not_defined # Def: putative transposase # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 37 1 37 322 77 100.0 2e-13 MSQPGSLCVDIDVSKAILDIAASSAIEQFSVGNDSDGVTNGAIVIHTQRLKSDPGGNLLS >gi|299857030|gb|ADWS01000034.1| GENE 6 4170 - 5192 686 340 aa, chain + ## HITS:1 COG:YPO2026 KEGG:ns NR:ns ## COG: YPO2026 COG4584 # Protein_GI_number: 16122267 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 340 1 340 340 679 99.0 0 MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEY RDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEP GRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPR EVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML ALPPEKKEYDVHPGENLVNFDKHPLHHPLSIYDSFCRGVA >gi|299857030|gb|ADWS01000034.1| GENE 7 5192 - 5971 570 259 aa, chain + ## HITS:1 COG:YPO2025 KEGG:ns NR:ns ## COG: YPO2025 COG1484 # Protein_GI_number: 16122266 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Yersinia pestis # 1 259 2 260 260 471 100.0 1e-133 MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQA MYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAI AMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQ EEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGE SYRLRQKRKAGVIAEANPE >gi|299857030|gb|ADWS01000034.1| GENE 8 6072 - 6413 121 113 aa, chain + ## HITS:1 COG:all0306 KEGG:ns NR:ns ## COG: all0306 COG3547 # Protein_GI_number: 17227802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 2 107 47 146 320 83 41.0 1e-16 MYAIALVLMKATGGLETAIVCALQAEGFELAVVNPRQARDFARAMGYLAKTDSIDARVLS QMAEVLNRHPERERFIRALPDTECQVLTAMVVRRRQLITMLVAERNRLHPAHP >gi|299857030|gb|ADWS01000034.1| GENE 9 6768 - 6902 69 44 aa, chain + ## HITS:1 COG:no KEGG:ECO26_2889 NR:ns ## KEGG: ECO26_2889 # Name: not_defined # Def: putative transposase # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 44 279 322 322 91 100.0 1e-17 MRLLAAGKPKKVALVTCIRKLLTILNAMLRKNEEWNESYHHVAP >gi|299857030|gb|ADWS01000034.1| GENE 10 6912 - 7304 173 130 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A2131 NR:ns ## KEGG: EcHS_A2131 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 130 1 130 130 249 100.0 2e-65 MYAKSFLALDGNGRLTGARTAQAAPYAHYTCHLCGSALRYHPQYDTELPWFEHTDDRLTE HGQQCPYVRPERREIQLIKRLQQFVPDALPVVRKASWHCRQCHHDYYGERYCTHCQTGGF SLPRTAQQLS >gi|299857030|gb|ADWS01000034.1| GENE 11 7470 - 8039 471 189 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4881 NR:ns ## KEGG: ECS88_4881 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 188 13 200 201 380 98.0 1e-104 MTYKYNPFWQQRIRETVRHALNVHPRLTALRVDLRLPDVPAATDATVISRFINALKARID AYQKRKHREGKRVHPTTLHYVWAREFGEFKGKKHYHLMLLVNRDTWCRAGDYRAPESLAG MIKQAWCSALGVDVGCHATLVHFPAWPAVWLARNDDTGFQQVLERANYLAKEHTKAHCTG ERNFGCSRG >gi|299857030|gb|ADWS01000034.1| GENE 12 9753 - 9959 291 68 aa, chain + ## HITS:1 COG:Z1188 KEGG:ns NR:ns ## COG: Z1188 COG3311 # Protein_GI_number: 15800709 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 9 58 15 64 65 78 68.0 3e-15 MITPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKDGDFPAPIKMGRSSRWLKSEVEAWLQ ARIAQSRP >gi|299857030|gb|ADWS01000034.1| GENE 13 10046 - 10648 474 200 aa, chain + ## HITS:1 COG:no KEGG:ECO26_2894 NR:ns ## KEGG: ECO26_2894 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 200 50 249 249 420 100.0 1e-116 MKPQYQTRYELLHESYQKWLTGFTRHAVSWGVCHPNIYYFHNLTPGWVSFNGEKPEIAIV PQSLHRLIYGPDKRTTPPLDDDLIVNLCTSEHLLVHHPMLEGILLSECERLRQRSLANKL ISLFRQFGGTELRLKLVWLCWLDLMTGNCLDDWTENLKRKSEKELEEWIINRQKQSAALT DLMDQYVLLAYRTTVDDKRT >gi|299857030|gb|ADWS01000034.1| GENE 14 10970 - 12454 400 494 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_4878 NR:ns ## KEGG: ECUMN_4878 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 494 24 517 517 998 100.0 0 MSFGQPCDEFPLSSLPPLIRDAVIEAQQITQAPLGLVAASALGAVSLVCQNLIDVCRLNT LRGPVSLFFLTLAESGERKTAVDKLLMKPLYQQEMQLYSRYKSELAVWKNKEELLKAQKK ALLSKLNKELRKGADESETLRQLEVLQKNSAEEPVRYKFIFNDATTAAIKNQLCGKWRSV GIMSDEAGIIFDGYTLSELPFINKMWDGSVLSVDRKNEPEQMIENARMTLSLMVQPGLFD RYMERKGSVARDSGFLARCLISKPATTQGKRFINGAVIPGGSLTAFHERLMELARGSIEK SSEDERYCLHFSPEAQKIFIEHYNVLEQDLSPSGPLSPFRGHVSKKTENIARIAALFQYF SYGEGKISADIMTSAVVISSWYTDEYKKLFALPDESELQQKDAEELFDWLIEECRGECPP RVRKNYILQCGPGRFRNRKKLNALLNILESQFRLSVVPEGKTMYVLLPQIASLKLSDVSG IFTSGYHYNKLRAK >gi|299857030|gb|ADWS01000034.1| GENE 15 13683 - 14555 674 290 aa, chain + ## HITS:1 COG:ECs1395 KEGG:ns NR:ns ## COG: ECs1395 COG3596 # Protein_GI_number: 15830649 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 552 96.0 1e-157 MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTRHEPVIGIMGKSGAGKSSLCNALFQGE VTPVSDVHAGTREVRRFRLSGHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLW LIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIRE KTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRS QAREQFTGAVDRIFDTAESVCVASVVRTALRAVRDTVVSVARAVWNWIFF >gi|299857030|gb|ADWS01000034.1| GENE 16 14883 - 18002 2340 1039 aa, chain + ## HITS:1 COG:flu KEGG:ns NR:ns ## COG: flu COG3468 # Protein_GI_number: 16129941 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 1 1039 53 1091 1091 1677 99.0 0 MKRHLNTCYRLVWNHITGAFVVASELARARGKRGGVAVALSLAAVTSLPVLAADIVVHPG ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRTEGTANTTVVYAGGD QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA MDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG DLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA DIVALGTRHSMKASTDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQ PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLDLQAGLEARVRENITLGVQAGYAHS VSGSSAEGYNGQATLNVTF >gi|299857030|gb|ADWS01000034.1| GENE 17 18123 - 20639 1623 838 aa, chain + ## HITS:1 COG:no KEGG:ECO26_2902 NR:ns ## KEGG: ECO26_2902 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 838 1 838 838 1641 99.0 0 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG PMQLEVPRDQYAGAVETMRNKIREGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIE SVTYDIAEGSVVSLAAGGISFALTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTT QQLHRLSVVQGMLKHIDFSTASPTVRLALQKGTGAGNISALNKVMKGTLVTSLALVAVTT GPDMIKMLRGRISGAQFIRNLAVASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVL GGMIASAVSGKIAGALVEEDRVKILAMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQN ALEIIFAAGIQQRAATNMLIKPLVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA >gi|299857030|gb|ADWS01000034.1| GENE 18 20715 - 21170 247 151 aa, chain + ## HITS:1 COG:no KEGG:ECED1_4883 NR:ns ## KEGG: ECED1_4883 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 151 1 151 151 310 100.0 1e-83 MIHLFKTCMITAFILGLTWSAPLRAQDQRYISIRNTDTIWLPGNICAYQFRLDNGGNDEG FGPLTITLQLKDKYGQTLVTRKMETEAFGDSNATRTTDAFLETECVENVATTEIIKATEE SNGHRVSLPLSVFNPQDYHPLLITVSGKNVN >gi|299857030|gb|ADWS01000034.1| GENE 19 21249 - 21482 88 77 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3360 NR:ns ## KEGG: EC55989_3360 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 77 1 77 77 154 100.0 1e-36 MPGYTEYVLAEGSFSYGQAVAVITAYRNVFIQDDPGMHFRRVIRNAEGQRRWRCRNSEPD AGKVLNTRLASDGLLRQ >gi|299857030|gb|ADWS01000034.1| GENE 20 21582 - 22400 645 272 aa, chain + ## HITS:1 COG:no KEGG:ECO26_2908 NR:ns ## KEGG: ECO26_2908 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 272 1 272 272 530 99.0 1e-149 MRLASRFGYANQIRRDRPLTHEELMHYVPGIFGEDKHTSRSQNYTYIPTITVLESLQREG FQPFFACQTRVRDPGRRGYTKHMLRLRRAGEINGEHVPEIILLNSHDGTSSYQMLPGYFR FVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFDRIEEKRDAMQSLVLPPPARQ ALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK RIHTRAIHSIDTDIKLNRALWVMAETLLESLR >gi|299857030|gb|ADWS01000034.1| GENE 21 22455 - 22940 454 161 aa, chain + ## HITS:1 COG:no KEGG:ECO111_0312 NR:ns ## KEGG: ECO111_0312 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 161 1 161 161 320 92.0 1e-86 MKTISHNSTTSSVSVTAASGNDQPQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGW MDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAAC LMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID >gi|299857030|gb|ADWS01000034.1| GENE 22 22956 - 23432 458 158 aa, chain + ## HITS:1 COG:ECs1403 KEGG:ns NR:ns ## COG: ECs1403 COG2003 # Protein_GI_number: 15830657 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 300 99.0 6e-82 MQQLSFLPGEMTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFR VLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKAD RLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL >gi|299857030|gb|ADWS01000034.1| GENE 23 23495 - 23716 316 73 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2261 NR:ns ## KEGG: EC55989_2261 # Name: yeeT # Def: conserved hypothetical protein; CP4-44 prophage # Organism: E.coli_55989 # Pathway: not_defined # 1 73 1 73 73 150 100.0 1e-35 MKIITRGEAMRIHQQHPTSRLFPFCTGKYRWHGSAEAYTGREVQDIPGVLAVFAERRKDS FGPYVRLMSVTLN >gi|299857030|gb|ADWS01000034.1| GENE 24 23879 - 24247 204 122 aa, chain + ## HITS:1 COG:no KEGG:ECP_0337 NR:ns ## KEGG: ECP_0337 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 122 1 122 122 252 100.0 3e-66 MSDALSGTMLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGLFSDADAY HLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCKADTLGSGGYVYLAVYPTPET KK >gi|299857030|gb|ADWS01000034.1| GENE 25 24337 - 24714 171 125 aa, chain + ## HITS:1 COG:no KEGG:c5149 NR:ns ## KEGG: c5149 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 125 1 125 125 246 97.0 2e-64 MKTLPDTHVREASSCPSPVTIWQTLLSRLLGQHYGLTLNDTPFADERVIEQHIEAGISLC DAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKH PEAKR >gi|299857030|gb|ADWS01000034.1| GENE 26 24711 - 24914 279 67 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4640 NR:ns ## KEGG: ECS88_4640 # Name: yeeW # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 66 1 66 140 109 93.0 2e-23 MKLALTLEADSVNVQALNMGRIVVDVDGVNLAELINKVAENGDSLRVVDDRDSTETPATY ASPHQLL >gi|299857030|gb|ADWS01000034.1| GENE 27 25812 - 26141 542 109 aa, chain - ## HITS:1 COG:ECs2809 KEGG:ns NR:ns ## COG: ECs2809 COG2926 # Protein_GI_number: 15832063 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 23 131 131 177 100.0 4e-45 METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEA IQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGEMKNGEAK >gi|299857030|gb|ADWS01000034.1| GENE 28 26313 - 27371 898 352 aa, chain - ## HITS:1 COG:yeeA KEGG:ns NR:ns ## COG: yeeA COG1289 # Protein_GI_number: 16129949 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 352 1 352 352 686 99.0 0 MRADKSLSPFEIRVYRHYRIVHGTRVALAFLLTFLIIRLFTIPESTWSLVTMVVIMGPIS FWGNVVPRAFERIGGTVLGSILGLIALQLELISLPLMLVWCAAAMFLCGWLALGKKPYQG LLIGVTLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFTGIWPQRAFIHWRIQLAKSLTE YNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQTINRN LVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPVFANTEK LNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK >gi|299857030|gb|ADWS01000034.1| GENE 29 27569 - 28042 403 157 aa, chain - ## HITS:1 COG:sbmC KEGG:ns NR:ns ## COG: sbmC COG3449 # Protein_GI_number: 16129950 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Escherichia coli K12 # 1 157 1 157 157 315 98.0 2e-86 MNYEIKQEDKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVPKEWVAVYYDNPDETPA EKLRCDTVVTVPGYFTLPENSEGVILTEISGGQYAVAVARVVGDDFAKPWYQFFNSLLQD SAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPKHH >gi|299857030|gb|ADWS01000034.1| GENE 30 28161 - 29327 945 388 aa, chain - ## HITS:1 COG:ECs2812 KEGG:ns NR:ns ## COG: ECs2812 COG1686 # Protein_GI_number: 15832066 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 388 3 390 390 799 99.0 0 MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEIELYDRDKQV AHWPLVTLESVGEGSMFSRLSDYFHHKA >gi|299857030|gb|ADWS01000034.1| GENE 31 29536 - 30963 1246 475 aa, chain + ## HITS:1 COG:sbcB KEGG:ns NR:ns ## COG: sbcB COG2925 # Protein_GI_number: 16129952 # Func_class: L Replication, recombination and repair # Function: Exonuclease I # Organism: Escherichia coli K12 # 1 475 1 475 475 978 99.0 0 MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQ PGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNF YDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNA HDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWR GNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNAAIPVKL VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFAEAEPFTPS DNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLD YAEQQRWLEHRRQVFTPEFLQGYADELQMLAQQYADDKEKVALLKALWQYAEEIV >gi|299857030|gb|ADWS01000034.1| GENE 32 31006 - 31233 300 75 aa, chain - ## HITS:1 COG:ECs2814 KEGG:ns NR:ns ## COG: ECs2814 COG0425 # Protein_GI_number: 15832068 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 124 100.0 6e-29 MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATEAIPQWAAEEGHAITDY QQIGDAAWSITVQKA >gi|299857030|gb|ADWS01000034.1| GENE 33 31247 - 32305 749 352 aa, chain - ## HITS:1 COG:yeeE KEGG:ns NR:ns ## COG: yeeE COG2391 # Protein_GI_number: 16129954 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Escherichia coli K12 # 1 352 1 352 352 622 99.0 1e-178 MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYLAKNNRMFYALLIAISVQSVGVFALI QAGLLTYEAGAFPWLGTVIGGYIFGLGIVLAGGCATGTWYRAGEGLIGSWIALFTYMVMS AVMRSPHASGLNQTLQHYSTEHNSIAETFNLSVWPLVAVLLVITLWVVMKELKKPKLKVA TLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGITSPTANILQFL VAGDVKYINWGVFLVLGIFVGSFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAG GCSIGNGLVMTAMMTWQGWIGLVFMILGVWTASWLVYVRPQRKARLATAAAN >gi|299857030|gb|ADWS01000034.1| GENE 34 32484 - 33842 1506 452 aa, chain - ## HITS:1 COG:ECs2816 KEGG:ns NR:ns ## COG: ECs2816 COG0531 # Protein_GI_number: 15832070 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 452 3 454 454 816 100.0 0 MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVSGLTDGHVPTAYAFALI AILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSSLLDYLFAPMINILLAKIY FEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIVVLQVVLIAVILGMVVYGVFE GEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFDGISNLSEETKDAERVIPRAIFL TALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEIMLYVAGKAFQVGALIFSTITVLAS GMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWRTPAMNIILVGAIALLAINFDLVMATA LINFGALVAFTFVNLSVISQFWIREKRNKTLKDHFQYLFLPMCGALTVGALWVNLEESSM VLGLIWAAIGLIYLACVTKSFRNPVPQYEDVA >gi|299857030|gb|ADWS01000034.1| GENE 35 34109 - 35038 751 309 aa, chain - ## HITS:1 COG:yeeY KEGG:ns NR:ns ## COG: yeeY COG0583 # Protein_GI_number: 16129956 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 309 8 316 316 619 100.0 1e-177 MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFT RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHS VTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLA LEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVYA KSDDGKSAI >gi|299857030|gb|ADWS01000034.1| GENE 36 35084 - 35908 766 274 aa, chain - ## HITS:1 COG:ECs2818 KEGG:ns NR:ns ## COG: ECs2818 COG0451 # Protein_GI_number: 15832072 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 274 1 274 274 528 99.0 1e-150 MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDS DDLDALMDVDALVITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQ GTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLAGLVGPGRHPGRFFAGKTAPD GEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMARLLGLEPPQFRN SLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE >gi|299857030|gb|ADWS01000034.1| GENE 37 35991 - 36245 114 84 aa, chain - ## HITS:1 COG:AGc3658 KEGG:ns NR:ns ## COG: AGc3658 COG4115 # Protein_GI_number: 15889305 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 84 1 88 89 107 56.0 5e-24 MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGKPEPLKHNLSGFWSRRI TEEHRLVYAVTDDSLLIAACRYHY >gi|299857030|gb|ADWS01000034.1| GENE 38 36242 - 36493 287 83 aa, chain - ## HITS:1 COG:yefM KEGG:ns NR:ns ## COG: yefM COG2161 # Protein_GI_number: 16129958 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Antitoxin of toxin-antitoxin stability system # Organism: Escherichia coli K12 # 1 83 10 92 92 140 100.0 8e-34 MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPAN ARRLMDSIDSLKSGKGTEKDIIE >gi|299857030|gb|ADWS01000034.1| GENE 39 36972 - 37871 1111 299 aa, chain + ## HITS:1 COG:hisG KEGG:ns NR:ns ## COG: hisG COG0040 # Protein_GI_number: 16129960 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 299 1 299 299 574 100.0 1e-164 MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPG LVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPL SLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEAN GLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQGVIQARESKYIMMHAPTERLDE VIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME >gi|299857030|gb|ADWS01000034.1| GENE 40 37877 - 39181 1253 434 aa, chain + ## HITS:1 COG:ECs2821 KEGG:ns NR:ns ## COG: ECs2821 COG0141 # Protein_GI_number: 15832075 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Escherichia coli O157:H7 # 1 434 1 434 434 789 99.0 0 MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDDALREYSAKFDK TTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQV TRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLCSPPPIADEILYAAQLCGVQD VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVL VIADSGATPDFVASDLLSQAEHGPDSQVILLTPDADMAHQVAEAVERQLAELPRAETARQ ALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGD YASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKVGFSALASTIETLAAAERLTAHK NAVTLRVNALKEQA >gi|299857030|gb|ADWS01000034.1| GENE 41 39178 - 40248 1153 356 aa, chain + ## HITS:1 COG:hisC KEGG:ns NR:ns ## COG: hisC COG0079 # Protein_GI_number: 16129962 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Escherichia coli K12 # 1 356 1 356 356 712 100.0 0 MSTVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQQTLNRYPECQP KAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETI GVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI VVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVI APYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYI LARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAEQV >gi|299857030|gb|ADWS01000034.1| GENE 42 40248 - 41315 1329 355 aa, chain + ## HITS:1 COG:hisB_2 KEGG:ns NR:ns ## COG: hisB_2 COG0131 # Protein_GI_number: 16129963 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Escherichia coli K12 # 149 355 1 207 207 431 99.0 1e-121 MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELMKLQKAGYKLVMITNQDGLG TQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAM DRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQLTKRDRYAHVVRNTKETQI DVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEH FFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL >gi|299857030|gb|ADWS01000034.1| GENE 43 41315 - 41905 727 196 aa, chain + ## HITS:1 COG:hisH KEGG:ns NR:ns ## COG: hisH COG0118 # Protein_GI_number: 16129964 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Escherichia coli K12 # 1 196 1 196 196 417 100.0 1e-117 MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRER ELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR VYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYGEPFTAAVQKDNFYGVQFHPE RSGAAGAKLLKNFLEM >gi|299857030|gb|ADWS01000034.1| GENE 44 41905 - 42642 822 245 aa, chain + ## HITS:1 COG:ECs2825 KEGG:ns NR:ns ## COG: ECs2825 COG0106 # Protein_GI_number: 15832079 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Escherichia coli O157:H7 # 1 245 2 246 246 461 98.0 1e-130 MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKR QIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSPERVKGWFERFG ADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLA GSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALLEGKFTVKEAIA CWQNA >gi|299857030|gb|ADWS01000034.1| GENE 45 42624 - 43400 886 258 aa, chain + ## HITS:1 COG:ECs2826 KEGG:ns NR:ns ## COG: ECs2826 COG0107 # Protein_GI_number: 15832080 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 499 95.0 1e-141 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV VDKSWVARVAEVIDIPFCVAGGIKSAEDAAKILSFGADKISINSPALADPELITRLADRF GVQCIVVGIDTWYDATTGKYHVNQYTGDECRTRVTHWETLEWVQEVQKRGAGEIVLNMMN QDGVRNGYDLEQLKKVRAVCHVPLIASGGAGTMEHFLEAFRDANVDGALAASVFHKQIIN IGELKTYLADQGVEIRVC >gi|299857030|gb|ADWS01000034.1| GENE 46 43394 - 44005 639 203 aa, chain + ## HITS:1 COG:ZhisI_1 KEGG:ns NR:ns ## COG: ZhisI_1 COG0139 # Protein_GI_number: 15802505 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Escherichia coli O157:H7 EDL933 # 1 112 1 112 112 214 86.0 1e-55 MLTEQQQAQLDWEKTDGLLPVVVQHAVSGEVLMLGYMNQEALAKTVDSGKVTFFSRTKQR LWTKGETSGHFLNVVSITPDCDNDTLLVLANPIGPTCHKGTSSCFGEASHQWLFLYQLEQ LLAERKTADPSSSYTAKLYASGTKRIAQKVGEEGVETALAATVHDREELTNEASDLMYHL LVLLQDQELDLTAVIENLRKRHK >gi|299857030|gb|ADWS01000034.1| GENE 47 44110 - 44379 169 89 aa, chain - ## HITS:1 COG:YPO3280 KEGG:ns NR:ns ## COG: YPO3280 COG1943 # Protein_GI_number: 16123437 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 89 64 152 152 181 96.0 2e-46 MLVEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQ DYIKHQLEEDKMGEQLSIPYPGSPFTGRK >gi|299857030|gb|ADWS01000034.1| GENE 48 44753 - 45733 1081 326 aa, chain - ## HITS:1 COG:STM2079 KEGG:ns NR:ns ## COG: STM2079 COG3765 # Protein_GI_number: 16765409 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Salmonella typhimurium LT2 # 1 326 1 326 327 383 68.0 1e-106 MTQNNNTPVNSSNGPEQIDLLDLVLQLWRGKWVIGAFVAVFIIIAGIYITVAKEKWTSSA IISQPDAAQIATYANALNILYGSAAPSMQDIQNRAIGRFNSSFSALAQALENQEMPEKLT IDSTVKGQALPLSVTYQGESAEAAQKQLAQYIQQVDEQMAKELALDLKDNIKQQIATLND SLENQEKVAQEQKDLRIQQITEALKNAEAAKITTPQIQQTQDVTQETMFLLGSEALKSMI DNEASRPLVFPGAYYQTKQKLLDIEKLNVKPDTIHVYRYVMKPDLPIRRDSPKKAITLIL AVLLGGIIGSGVVLGRNALRNYKPKA >gi|299857030|gb|ADWS01000034.1| GENE 49 45936 - 46493 504 185 aa, chain + ## HITS:1 COG:BH3709 KEGG:ns NR:ns ## COG: BH3709 COG0451 # Protein_GI_number: 15616271 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Bacillus halodurans # 1 165 4 169 343 217 66.0 1e-56 MVTGAAGFIGSHVSKRLLDAGHQVVGIDNLNDYYDVNLKLARLDLLKSGNFTFHKMELAD REAMAALFASEKFERVIHLAAQAGVRYSLENPHAYADANLVGHLNVLEGCRHNKVQHLLY ASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSGNDSNLLIVFYVQIMPDDLVM QLHRF >gi|299857030|gb|ADWS01000034.1| GENE 50 46428 - 46616 92 62 aa, chain - ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 62 106 167 167 116 100.0 1e-26 YESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKH YQ Prediction of potential genes in microbial genomes Time: Sun May 15 22:38:31 2011 Seq name: gi|299857029|gb|ADWS01000035.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont34.1, whole genome shotgun sequence Length of sequence - 45857 bp Number of predicted genes - 55, with homology - 54 Number of transcription units - 23, operones - 10 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1269 584 ## APECO1_O1CoBM79 hypothetical protein - Term 1292 - 1325 3.3 2 2 Op 1 . - CDS 1344 - 1760 431 ## COG1487 Predicted nucleic acid-binding protein, contains PIN domain 3 2 Op 2 . - CDS 1757 - 1987 249 ## EcSMS35_A0140 plasmid maintenance protein VagC - Prom 2059 - 2118 4.4 + Prom 2253 - 2312 4.5 4 3 Tu 1 . + CDS 2338 - 6162 915 ## EpC_26330 conserved uncharacterized protein + Term 6177 - 6215 3.0 - Term 6164 - 6202 -0.8 5 4 Op 1 . - CDS 6207 - 6623 307 ## COG1487 Predicted nucleic acid-binding protein, contains PIN domain 6 4 Op 2 . - CDS 6620 - 6850 214 ## EcSMS35_A0140 plasmid maintenance protein VagC - Prom 6880 - 6939 5.1 + Prom 6872 - 6931 3.9 7 5 Op 1 . + CDS 7115 - 7615 233 ## KPK_A0162 hypothetical protein 8 5 Op 2 . + CDS 7628 - 8401 553 ## KPK_A0163 hypothetical protein + Term 8413 - 8444 -0.9 + Prom 8465 - 8524 4.0 9 6 Tu 1 . + CDS 8568 - 9701 337 ## APECO1_O1CoBM87 hypothetical protein + Term 9725 - 9756 2.4 - Term 9526 - 9563 -0.4 10 7 Tu 1 . - CDS 9735 - 10223 225 ## SCV19 hypothetical protein - Prom 10279 - 10338 2.8 + Prom 10648 - 10707 9.7 11 8 Op 1 . + CDS 10814 - 11032 319 ## COG5302 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid 12 8 Op 2 . + CDS 11034 - 11339 331 ## ECSE_P2-0011 plasmid maintenance protein CcdB 13 8 Op 3 . + CDS 11340 - 12146 553 ## COG0582 Integrase 14 9 Tu 1 . + CDS 12920 - 13675 273 ## COG5527 Protein involved in initiation of plasmid replication + Term 13861 - 13924 2.9 + Prom 14104 - 14163 3.4 15 10 Op 1 25/0.000 + CDS 14263 - 15429 579 ## COG1192 ATPases involved in chromosome partitioning 16 10 Op 2 . + CDS 15429 - 16400 307 ## COG1475 Predicted transcriptional regulators + Term 16449 - 16494 4.6 + Prom 16890 - 16949 2.1 17 11 Tu 1 . + CDS 17075 - 18001 701 ## EcE24377A_C0015 hypothetical protein + Term 18011 - 18048 8.5 18 12 Op 1 . + CDS 18386 - 19069 607 ## COG0863 DNA modification methylase 19 12 Op 2 . + CDS 19070 - 19291 253 ## p1ECUMN_0136 hypothetical protein 20 12 Op 3 . + CDS 19305 - 19739 467 ## ECSE_P1-0049 hypothetical protein 21 12 Op 4 . + CDS 19790 - 20566 519 ## ECSE_P2-0030 hypothetical protein + Term 20574 - 20604 3.3 22 13 Op 1 . + CDS 20983 - 21408 444 ## SC126 antirestriction protein KlcA 23 13 Op 2 . + CDS 21455 - 21877 473 ## EcE24377A_E0028 putative DNA methylase 24 13 Op 3 . + CDS 21874 - 22065 165 ## ECH74115_B0058 hypothetical protein + Term 22133 - 22190 14.7 - Term 22669 - 22722 11.8 25 14 Tu 1 . - CDS 22931 - 23086 75 ## ECH74115_B0060 hypothetical protein - Prom 23106 - 23165 1.7 26 15 Op 1 . + CDS 23100 - 23330 147 ## EcSMS35_A0060 hypothetical protein 27 15 Op 2 . + CDS 23382 - 24743 1097 ## EcE24377A_E0031 hypothetical protein 28 15 Op 3 . + CDS 24791 - 25354 377 ## EcSMS35_A0058 hypothetical protein 29 15 Op 4 . + CDS 25380 - 25592 121 ## EcSMS35_A0057 hypothetical protein + Prom 26559 - 26618 6.2 30 16 Tu 1 . + CDS 26638 - 27459 492 ## APECO1_O1CoBM24 hypothetical protein + Term 27460 - 27522 19.1 - Term 27588 - 27626 -1.0 31 17 Tu 1 . - CDS 27758 - 28267 172 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 28431 - 28490 8.1 32 18 Tu 1 . + CDS 28691 - 29074 268 ## p1ECUMN_0116 conjugal transfer protein TraM + Prom 29108 - 29167 5.6 33 19 Tu 1 . + CDS 29208 - 29885 98 ## p1ECUMN_0115 co,jugation transfer regulator protein + Term 29893 - 29921 0.5 34 20 Op 1 . + CDS 30018 - 30200 68 ## PSLT076 conjugal transfer protein TraY 35 20 Op 2 . + CDS 30234 - 30596 439 ## EcSMS35_A0039 conjugal transfer pilin subunit TraA 36 20 Op 3 . + CDS 30601 - 30912 293 ## EcSMS35_A0038 conjugal transfer pilus assembly protein TraL 37 20 Op 4 . + CDS 30934 - 31500 579 ## EcSMS35_A0037 conjugal transfer pilus assembly protein TraE 38 20 Op 5 . + CDS 31487 - 32215 520 ## p1ECUMN_0108 conjugal transfer protein TraK 39 20 Op 6 . + CDS 32215 - 33666 1352 ## EcSMS35_A0035 conjugal transfer pilus assembly protein TraB 40 20 Op 7 . + CDS 33656 - 34222 266 ## p1ECUMN_0106 conjugal transfer protein TraP 41 20 Op 8 . + CDS 34209 - 34520 168 ## ECSE_P2-0070 conjugal transfer protein TrbD 42 20 Op 9 . + CDS 34520 - 35035 291 ## UTI89_P113 conjugal transfer protein TraV + Term 35058 - 35086 2.1 + Prom 35053 - 35112 3.1 43 21 Op 1 . + CDS 35170 - 35391 123 ## COG1734 DnaK suppressor protein 44 21 Op 2 . + CDS 35384 - 35488 76 ## 45 21 Op 3 . + CDS 35551 - 38178 2334 ## COG3451 Type IV secretory pathway, VirB4 components 46 21 Op 4 . + CDS 38175 - 38561 285 ## APECO1_O1CoBM40 conjugal transfer protein TrbI 47 21 Op 5 . + CDS 38558 - 39190 455 ## p1ECUMN_0096 conjugal transfer pilus assembly protein TraW 48 21 Op 6 . + CDS 39187 - 40179 827 ## APECO1_O1CoBM42 conjugal transfer pilus assembly protein TraU 49 21 Op 7 . + CDS 40209 - 40514 73 ## p1ECUMN_0094 conserved hypothetical protein, putative membrane protein 50 21 Op 8 . + CDS 40523 - 41161 468 ## p1ECUMN_0093 conjugal transfer pilus assembly protein TrbC 51 21 Op 9 . + CDS 41158 - 43008 944 ## p1ECUMN_0092 conjugal transfer mating pair stabilization protein TraN 52 21 Op 10 . + CDS 43035 - 43292 99 ## APECO1_O1CoBM45 conjugal transfer protein TrbE 53 21 Op 11 . + CDS 43285 - 44028 624 ## pECS88_0084 conjugal pilus assembly protein TraF + Prom 44032 - 44091 2.4 54 22 Tu 1 . + CDS 44158 - 45138 593 ## COG3039 Transposase and inactivated derivatives, IS5 family 55 23 Tu 1 . + CDS 45595 - 45780 63 ## COG1662 Transposase and inactivated derivatives, IS1 family Predicted protein(s) >gi|299857029|gb|ADWS01000035.1| GENE 1 3 - 1269 584 422 aa, chain - ## HITS:1 COG:no KEGG:APECO1_O1CoBM79 NR:ns ## KEGG: APECO1_O1CoBM79 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 422 1 422 521 823 100.0 0 MPLITRLMLQNFKKFPELDLRFSNDRNILVGDNESGKSTILLALDLVLSDSRHRVEALGV ESLLSQSAVRHFQEGERRADQLPVLTADVFLSNGGEPDLNGRQNLAGIDADGLRMRIAPM MEEYGQDIHHVLQQDPDNFPYEYYSVQFSTFSGGHFAGFRRYLRHLFLDSARIDNEHAAQ EYTRTVYSVNVPVADRYRLENSYRQQKMHFCARHLSAINDTLKTYQFGVRSGAKSGLEAN LDITEDGISIRHRGKGRQCFIKTEFALQRHQQQGGEIHALLLEEPENHLSHVSMKRLVNQ LATERQTQVFIATHSSHISSRLDLRKAILLGATRPVLMNELSAETAAFFMKAPDNNVLEF ALARRVLLVEGDAEFILIEAFYHRLYGRAPEDDGVHIIAIGGTSFRRYLELARLLENRVA AL >gi|299857029|gb|ADWS01000035.1| GENE 2 1344 - 1760 431 138 aa, chain - ## HITS:1 COG:STM3033 KEGG:ns NR:ns ## COG: STM3033 COG1487 # Protein_GI_number: 16766335 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Salmonella typhimurium LT2 # 5 136 4 131 132 107 41.0 6e-24 MNKIYMLDTNICSFIMREQPEALLKHLEQSVLRGHRIVVSAITYSEMRFGATGPKASPRH VQLVDAFCERLDAVLPWDRAAVDATTEIKVALRLAGTPIGPNDTAIAGHAIAACAILVTN NVREFERVPGLVLEDWVR >gi|299857029|gb|ADWS01000035.1| GENE 3 1757 - 1987 249 76 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_A0140 NR:ns ## KEGG: EcSMS35_A0140 # Name: vagC # Def: plasmid maintenance protein VagC # Organism: E.coli_SECEC # Pathway: not_defined # 1 76 1 76 76 132 96.0 3e-30 MRTVSIFKNGNNRAIRLPRDLDFEGVSELEIVREGDSIILRPVRPTWGSFLELEKADPDF MTEREDVVSDEGRVNL >gi|299857029|gb|ADWS01000035.1| GENE 4 2338 - 6162 915 1274 aa, chain + ## HITS:1 COG:no KEGG:EpC_26330 NR:ns ## KEGG: EpC_26330 # Name: not_defined # Def: conserved uncharacterized protein # Organism: E.pyrifoliae # Pathway: not_defined # 26 970 36 969 1270 330 28.0 2e-88 MRRPSRTEALMPVLSANKAQEEQINTSYEPLTPSVITDEKAQSYIEALNFACSRPDIRNI AVTGPYGAGKSSVLLTWERAEDNDFRVMTVSLADFEMQRAYPGDSLSVEGKPDYDDNEKK AGKAEEKTIEYSILQQLLYKEKKSVLPYSRLERISDVSACQIAMMTASLLFILASTATGL LFLFPDYIREKLSLSPELSQFLLELPVLARFGSAGIFLFTALFFALKKLHRTGVFDRRVS IDKVDILKGAITTRPAAPSLLNVYIDEIVYFFEQTQYNVVIFEDLDRHNDGAIFIKLREI NQLINNCLPTDNPVRFIYAVRDNLFITPESRTKFFDFVIPVIPVMDSENASEHFLSKFTL DELRQEGFKDCLARLALFIPDMRVMHNIANEFRLYRNIVNNGGDLKRLISLITYKNLYAE DYHRIDQKKGMLYSIVSEYTSGKLREDYCNNLKNKIETCLTELSKLHNEEVVTEHELRSE ILRPYISEKTAPRLHIMTGTGGQYDFDDVIQNENTFLSLLSNQIISIKPSGYNITITTID KKTAQVMKEEYQERIAIIQKKLNNDVSRLEENIKKNRCEIQNASSYDLAFFINKMGRSGF ERYIACCSTPEQHDGESITDNAANIDFIYFLLSHGYLSTDYMAYRSVFMPGSLSTEDNNF IRAVTSGRLPDETAKMPLSNIANTVAKLHGLGILMHDNAWHPQILWYLMRNDTNSLKTIM RMQAEVGAERRMVRLANEIFPLWEPAAQREYIRLMVDGDGHLSTMIHQIGRLNDTVAEQN LLPVLLSLPILSWEAVSQITREELQRLIDLQFNLVTSLPENCAQFFCENLRNSGCRLTNI PLARSDSGQETLHLVVQKKLWTYSTLNLQNICFSLSHESENNSDTFRKKPVALIKSLRIP NLEKYVYENISSFIRDVFIHSEENDLIPDFLNSTFVDWDDAKYMTESMSFVLEDVSVILN KENTETTEISYDQNLYSLLAHHNHITPCWNNVISLLSEDASIAGDTFCEWLNINYSLLPN DSLPLTDVQFSQLLIKAVTSPHISKEALIAITMAFRITLINVPENLPLNNAAVLIKQKWL APTSTVFEQLYQALYEEGDKLTSLLYALICARPVLLSDNYELVLFSDDQFDLGITRLILN GDKIADEVCISILNWLWEKDEALLSEAPLLSQQALIRFSTKITDDRQKQALLMQCLKNDG GSHKFIRQVLMTFGHQDYAAFLTERNYRSIPRSDAMWQLAVQLGNSGFIRPPKLTHADTR IRIEPFFNAENEYD >gi|299857029|gb|ADWS01000035.1| GENE 5 6207 - 6623 307 138 aa, chain - ## HITS:1 COG:STM3033 KEGG:ns NR:ns ## COG: STM3033 COG1487 # Protein_GI_number: 16766335 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Salmonella typhimurium LT2 # 5 136 4 131 132 110 41.0 5e-25 MNKIYMLDTNICSFIMREQPEAVLKNLEQAVLRGHRIVVSAITYSEMRFGATGPKASPRH VQLVDAFCARLDAILPWDRAAVDATTEVKVALRLAGTPIGPNDTAIAGHAIATGAILVTN NVREFERVPGLVLEDWAG >gi|299857029|gb|ADWS01000035.1| GENE 6 6620 - 6850 214 76 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_A0140 NR:ns ## KEGG: EcSMS35_A0140 # Name: vagC # Def: plasmid maintenance protein VagC # Organism: E.coli_SECEC # Pathway: not_defined # 1 76 1 76 76 126 89.0 2e-28 MRTVSIFKNGNNRAIRLPRDLDFEGVSELEIVREGDRIILRPLRPSWSSFLELEKADPGF MTEREDVVCDEGRFNL >gi|299857029|gb|ADWS01000035.1| GENE 7 7115 - 7615 233 166 aa, chain + ## HITS:1 COG:no KEGG:KPK_A0162 NR:ns ## KEGG: KPK_A0162 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 166 1 166 166 253 80.0 2e-66 MGNYSDFETDFVQRTLALIDQYNEMIEVLGKPFREQYNYTLTLNCLLGLIVLPKERALSF LLADRLTRQLKAEMGLHESQLPGPEMNLRELIHKMRNSVAHFCVQVESASDAHLVDWIVF RESQKDGEVYASFSAPELLPFLKYYATLLLDNMARRRAPDVNILDL >gi|299857029|gb|ADWS01000035.1| GENE 8 7628 - 8401 553 257 aa, chain + ## HITS:1 COG:no KEGG:KPK_A0163 NR:ns ## KEGG: KPK_A0163 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 30 257 1 228 228 419 85.0 1e-116 MLILDCSSRTQALHTLSAGFGCSPEKLKKVLLSLDLESIYELNPRQLVDAPQYLREYVCA ELGEPGPFTRALWFHGTRTFAGNTFPAGLLALNQSESLAMKMLLDLAPNEMVRTHLKEWD VPGGVPDEMFQLRTGDKIHWGPFGHLVRELHFNASENGLHDYLWLPELVEDVCKAYQKKY GHDLKPHYLSVLHPCIVWFEADIVYEKGVLETALSYAYTSVRDLPPDGNATFGIDCDGKS VSRSAIARIEFLQPGQM >gi|299857029|gb|ADWS01000035.1| GENE 9 8568 - 9701 337 377 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM87 NR:ns ## KEGG: APECO1_O1CoBM87 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 372 1 371 377 610 79.0 1e-173 MHFYVDETGQTGRNLFDKTQPVLSYGVLSSDANLDKVAEADLAVIRKTLGVQRLHAAELG LHRLSDLVDTLLVLQKKHRIRFDIWQVVKRDHAIISFFDQVFDQGMNPAVPWSAYWTPLR YPLLLNLASLFDDELASNAWTARLEAHDERASELFCTVSDELISRTAASALDHRSKQLIT DALNWASANFEQLGYNCKTNKERLRIMPNMIGFQSVLHGICSRLGAPERKASIIVDQQSQ FNTTQRELNEFYYQIRDMPWELGPGLPVMNMKNMPAEPLVFQSGTKSAGLELVDIYLWTF KRFMEDKALTKPLSRLVYTNLKTARTNSVSIQSVASRFKELLGKLPVPSAEIMRQAQELR DFDEARRMPYVVSGSPD >gi|299857029|gb|ADWS01000035.1| GENE 10 9735 - 10223 225 162 aa, chain - ## HITS:1 COG:no KEGG:SCV19 NR:ns ## KEGG: SCV19 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 162 12 173 173 147 46.0 1e-34 MDTSLIGPILTALLAAAGFYCKFWFTRYQASRDQAQKVSRAIEDVLSKMAALFGQKKPAR ILREEFSAVIAPLHQEMRILDDMTSRLPLKWLQREQRHVLYHARWLQRYLDSRRGGSDGD FFLLLHDVAMGTDYQVADILASQHDCKQRRGSQLPVNLKTCP >gi|299857029|gb|ADWS01000035.1| GENE 11 10814 - 11032 319 72 aa, chain + ## HITS:1 COG:PSLT027 KEGG:ns NR:ns ## COG: PSLT027 COG5302 # Protein_GI_number: 17233413 # Func_class: R General function prediction only # Function: Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid # Organism: Salmonella typhimurium LT2 # 1 72 1 72 72 110 90.0 7e-25 MKQRITVTVDSDSYQLLKAYDVNISGLVSTTMQNEARRLRAERWKAENQEGMAEVARFIE MNGSFADENRDW >gi|299857029|gb|ADWS01000035.1| GENE 12 11034 - 11339 331 101 aa, chain + ## HITS:1 COG:no KEGG:ECSE_P2-0011 NR:ns ## KEGG: ECSE_P2-0011 # Name: not_defined # Def: plasmid maintenance protein CcdB # Organism: E.coli_SE11 # Pathway: not_defined # 1 101 10 110 110 196 99.0 2e-49 MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDKVSRELYPVVHIGDES WRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI >gi|299857029|gb|ADWS01000035.1| GENE 13 11340 - 12146 553 268 aa, chain + ## HITS:1 COG:PSLT031 KEGG:ns NR:ns ## COG: PSLT031 COG0582 # Protein_GI_number: 17233417 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 14 265 6 257 260 392 87.0 1e-109 MSGSVIHSQSAVMVPAVYSAGQPASLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSAL LHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG RMPAGQQTHRLVPLSDSWYVSQLQTMVATLKIPMERRNRRTGRTEKARIWEVTDRTVRTW IGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV FALDVAARHRVQFAMPESDAVAMLKQLS >gi|299857029|gb|ADWS01000035.1| GENE 14 12920 - 13675 273 251 aa, chain + ## HITS:1 COG:NMB0495 KEGG:ns NR:ns ## COG: NMB0495 COG5527 # Protein_GI_number: 15676404 # Func_class: L Replication, recombination and repair # Function: Protein involved in initiation of plasmid replication # Organism: Neisseria meningitidis MC58 # 114 241 57 183 327 63 27.0 3e-10 MAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGIC EIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKRAH SPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNPYAMRLYESLCQYRKPDGSGI VSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIEKKKGRQTTHIVF SFRDITSMTTG >gi|299857029|gb|ADWS01000035.1| GENE 15 14263 - 15429 579 388 aa, chain + ## HITS:1 COG:YPCD1.13c KEGG:ns NR:ns ## COG: YPCD1.13c COG1192 # Protein_GI_number: 16082703 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Yersinia pestis # 1 386 1 386 388 581 69.0 1e-166 MKLMETLNQCINAGHEMTKAIAIAQFNDDSPEARKITRRWRIGEAADLVGVSSQAIRDAE KAGRLPHPDMEIRGRVEQRVGYTIEQINHMRDVFGTRLRRAEDVFPPVIGVAAHKGGVYK TSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLHIHAEDTLLPFYLGEKDDVT YAIKPTCWPGLDIIPSCLALHRIETELMGKFDEGKLPTDPHLMLRLAIETVAHDYDVIVI DSAPNLGIGTINVVCAADVLIVPTPAELFDYTSALQFFDMLRDLLKNVDLKGFEPDVRIL LTKYSNSNGSQSPWMEEQIRDAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTG AWRNALSIWEPVCNEIFDRLIKPRWEIR >gi|299857029|gb|ADWS01000035.1| GENE 16 15429 - 16400 307 323 aa, chain + ## HITS:1 COG:YPCD1.12c KEGG:ns NR:ns ## COG: YPCD1.12c COG1475 # Protein_GI_number: 16082702 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 1 320 1 316 320 270 49.0 4e-72 MKRAPVIPKHTLNTQPVGDTSLSTPAAPMVDSLIARVGVMARGNAITLPVCGRDVKFTLE VLRGDSVEKTSRVWSGNERDQELLTEDSLDDLIPSFLLTGQQTPAFGRRVSGVIEIADGS RRRKAAALTESDYRVLVGELDDEQMAALSRLGNDYRPTSAYERGQRYASRLQNEFAGNIS ALADAENISRKIITRCINTAKLPKSVVALFSHPGELSARSGDALQKAFTDKEELLKQQAS NLHEQKKAGVIFEAEEVITLLTSVLKTSSASRTSLSSRHQFAPGATVLYKGDKMVLNLDR SRVPTECIEKIEAILKELEKPAP >gi|299857029|gb|ADWS01000035.1| GENE 17 17075 - 18001 701 308 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_C0015 NR:ns ## KEGG: EcE24377A_C0015 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 308 1 308 308 615 98.0 1e-175 MPNWCSNRMHFSGEPAQIAEIKRLASGAVTPLYRRATNEGIQLFLAGSAGLLQTTEDVQF EPCPGLTDAGRGVVSPENIAFTRWLTHLQNGVLLDEQNCLMLHELWLQSGTGQRRWEGLP DEVRETITVHFTAKRGDWCGFWSNEDVSVWWNRLCDNVLPEKTMPFDLLTVLPTRLDVEV NGFNGGVLNGVPSAYHWYTEQYGVKWPVGYEVNISRQGENFIQVDFDTPWCQPESNVVAE LSRRFGCTLEHWYAEQGCNFCGWQRYERGELVDVLWGELEWSSPTDDDELPEVTAPEWIV DKVAHYGG >gi|299857029|gb|ADWS01000035.1| GENE 18 18386 - 19069 607 227 aa, chain + ## HITS:1 COG:YPMT1.64c KEGG:ns NR:ns ## COG: YPMT1.64c COG0863 # Protein_GI_number: 16082855 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Yersinia pestis # 1 227 1 225 225 427 88.0 1e-120 MSRFVLGNCIDVMTRIPDNAIDFILTDPPYLVGFRDRSGRTIAGDKTDEWLQPACNEMYR VLKKDALMVSFYGWNRVDRFMAAWKNAGFSVVGHLVFTKNYTSKAAYVGYRHECAYILAK GRPRLPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHPNAIVLDPFAGSGSTCVA ALQSGRRYIGIELLEQYHRAGQQRLAAVQRAMQQGAANDDWFMPEAA >gi|299857029|gb|ADWS01000035.1| GENE 19 19070 - 19291 253 73 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0136 NR:ns ## KEGG: p1ECUMN_0136 # Name: yfeB # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 73 1 73 73 125 100.0 5e-28 MNYAGHEKLRADVAEVANTMCDLRARLNDMEHRCRFDSDVLVERLTRQTLYRANRLFMEA YTEILELDSCFKD >gi|299857029|gb|ADWS01000035.1| GENE 20 19305 - 19739 467 144 aa, chain + ## HITS:1 COG:no KEGG:ECSE_P1-0049 NR:ns ## KEGG: ECSE_P1-0049 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 144 1 144 144 253 93.0 2e-66 MYGTCETLCRELAAKYPGDAPLMLVIWSPEEIQALADGMEISLTDHEIRTVLARMEDIPE DQRTESGISSAAVMEIISNVSENRQVTVPAELLASLIQTAEQALWKREWAARDNGLAVPE CVTRRQAVVNQARTLLKNNTHENN >gi|299857029|gb|ADWS01000035.1| GENE 21 19790 - 20566 519 258 aa, chain + ## HITS:1 COG:no KEGG:ECSE_P2-0030 NR:ns ## KEGG: ECSE_P2-0030 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 258 1 258 258 475 97.0 1e-133 MNENSTLNALICRHARNLLLAQGWPEETDVDQRNPNYPGWISIYVRLDAPRLATLLINRH GGVLPPLLASAIQRLTGTGAELVLSGSQWQSLPVLPADGTQVSFPYAGEWLTEDEIRAVL DAVHDAVRSICYQVAEDARRIRAALTTTGQTLLTRQTRRFRLVVKESDHPCWLDEDDENL PVVLDAIVNRGARFSSVEMYLVSECIEHILSSGLACDVLRIPDEPPRRWFDRGVLREVVR EARTEIRSMADALAKIRK >gi|299857029|gb|ADWS01000035.1| GENE 22 20983 - 21408 444 141 aa, chain + ## HITS:1 COG:no KEGG:SC126 NR:ns ## KEGG: SC126 # Name: klcA # Def: antirestriction protein KlcA # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 141 1 141 141 292 100.0 3e-78 MQYAKPVTLNVEECDRLSFLPYLFGNDFLYAEAYVYALAQKMMPEYQGGFWHFIRLPDGG GYMMPDGDRFHMVNGANWFDRTVSADAAGIILTSLVINRQLWLYHDSGDAGLTQLYRMRD AQLWRHIEFHPECNAIYAALD >gi|299857029|gb|ADWS01000035.1| GENE 23 21455 - 21877 473 140 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_E0028 NR:ns ## KEGG: EcE24377A_E0028 # Name: not_defined # Def: putative DNA methylase # Organism: E.coli_E24377A # Pathway: not_defined # 1 140 122 261 261 252 95.0 3e-66 MYCTVKEIIREVLDTDVPDSECVFAVVLTRGDVRHIAQDWSLTDDELETVMQRLDDAFEY GADVSVVHGVVRELMEEKRASRQVTVPAVMLEKVMALAGSEMKRLYAVGSENGGDGDAFV REEREAMDVVLQALDGETMS >gi|299857029|gb|ADWS01000035.1| GENE 24 21874 - 22065 165 63 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_B0058 NR:ns ## KEGG: ECH74115_B0058 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 63 1 63 63 113 96.0 2e-24 MNISTETREILRNYRAVINARRREMGQKPLTIAQIVDEICDFVANQQAVFLGGHYILQGS RNR >gi|299857029|gb|ADWS01000035.1| GENE 25 22931 - 23086 75 51 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_B0060 NR:ns ## KEGG: ECH74115_B0060 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 3 51 1 49 49 62 71.0 5e-09 MTLINETVKTVRAVSAVWIKQVPDLLFSYLRLTFSGVFLLLFLRSHYLPAG >gi|299857029|gb|ADWS01000035.1| GENE 26 23100 - 23330 147 76 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0060 NR:ns ## KEGG: EcSMS35_A0060 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 76 1 76 76 128 100.0 7e-29 MTVSIVSPSAAAVKPRRHPRFRREDIPAPEIDPVLKAFGRHIARSFHRGRGVHIPAMKNT AFGQVLRTLELKRAFN >gi|299857029|gb|ADWS01000035.1| GENE 27 23382 - 24743 1097 453 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_E0031 NR:ns ## KEGG: EcE24377A_E0031 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 453 1 453 453 846 98.0 0 MTLAAITMTAPEAASPVQMYRATYSPDDNKLRLYAVSRLDPETYKKVHDAGFRWAPKQAL FVAPAWTPGREDVLLSLAGEIEDEDSTLAERQEARAERFTGYSGKRASESAQALDEVERL AAMIPPGQPILVGHHSERRARRDAQRIENGMKRAVMLFERAEYWEERARSALLHAKYKER PDVRWRRIKKIEADLRKAEKTIAQSQKYLTMWRAESLDLNMAKLISSHDHISACFPLDTY PRPAEKSQYEGSRSLWSALDDDIITTEQAREIAIRCHERQIQHQQRWVNHYQNRLIYERA MLDESGGVVTRTQDFEPGGQVFSRGEWLTIIRVNKSNGAVSSVTTPNYSFLGYSGTMKVT PDRITDYKAPSAEEAAVASQAAKRPPVVNYPGEGFREMTKAQWAALPRDCKAVRSVAEAE DHGAYRYRRTMDNNFRLVNVYISDMKITEIPQK >gi|299857029|gb|ADWS01000035.1| GENE 28 24791 - 25354 377 187 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0058 NR:ns ## KEGG: EcSMS35_A0058 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 187 1 187 187 360 97.0 1e-98 MHSQLRERIRLMRARLDNAAPVAEIRAESQLFVTPAPVCDRLVMLAEISNRDHILEPSAG TGAILRAIRDTAPGAMCDAVEINSGLVRYLRENFNGVRVQCGDFMEWLPVQYYSRVIMNP PFSHGQDIRHILRAFSLLRPGGVLVAVCLNGPRQQEKLLPFSDVREELPRGTFAYTDVPT MIIRLRA >gi|299857029|gb|ADWS01000035.1| GENE 29 25380 - 25592 121 70 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0057 NR:ns ## KEGG: EcSMS35_A0057 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 8 43 17 52 82 68 86.0 6e-11 MPVCPRREKTRAGGAERGRAHAPPLSLRGRSDGGFCFFMPVICLLLMLLFLLLLLLLLLL LLLFFFFLLL >gi|299857029|gb|ADWS01000035.1| GENE 30 26638 - 27459 492 273 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM24 NR:ns ## KEGG: APECO1_O1CoBM24 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 273 39 311 311 558 100.0 1e-158 MRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSERYTYIPTINIINKLRDEG FQPFFACQSRVRDLGRREYSKHMLRLRREGHINGQEVPEIILLNSHDGSSSYQMIPGIFR FVCTNGLVCGNNFGEIRVPHKGDIVGQVIEGAYEVLGVFDKVTDNMEAMKEIHLNSDEQH LFGRAALMVRYEDENKTPVTPEQIITPRRREDKQNDLWTTWQRVQENMIKGGLSGRSASG KNTRTRAITGIDGDIRINKALWVIAEQFRKWKS >gi|299857029|gb|ADWS01000035.1| GENE 31 27758 - 28267 172 169 aa, chain - ## HITS:1 COG:PSLT072 KEGG:ns NR:ns ## COG: PSLT072 COG0741 # Protein_GI_number: 17233503 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Salmonella typhimurium LT2 # 1 155 1 155 156 238 73.0 6e-63 MKKWMLAICLMFINEICQATDCFDLAGRDYKIDPDLLRAISWQESRYRVNAIGINPVTGY GSGLMQVDSQHFNELARYGIKPEHLTTDPCMNIYTGAYYLAIAFKKWGVTWEAVGAYNAG FRKTERQNQRRLAYASDVYRIYTGIKSSKGIRLPATKKSLPEINSVQNN >gi|299857029|gb|ADWS01000035.1| GENE 32 28691 - 29074 268 127 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0116 NR:ns ## KEGG: p1ECUMN_0116 # Name: traM # Def: conjugal transfer protein TraM # Organism: E.coli_UMN026 # Pathway: not_defined # 1 126 1 126 127 205 94.0 3e-52 MAKVQAYVSDEIVYKINKIVERRRAEGAKSTDVSFSSISTMLLELGLRVYETQMERKESA FNQTEFNKLLLECVVKTQSSVAKILGIESLSPHVSGNPKFEYANMVEDIREKVSSEMERF FPENDEG >gi|299857029|gb|ADWS01000035.1| GENE 33 29208 - 29885 98 225 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0115 NR:ns ## KEGG: p1ECUMN_0115 # Name: traJ # Def: co,jugation transfer regulator protein # Organism: E.coli_UMN026 # Pathway: not_defined # 2 223 27 248 248 306 68.0 3e-82 MRERPLNSQSVNKYILNVQNIYRNSPVPVCVRNKKRKILYANGAFIELFSKEDKPFSGES YVRLQVEIFLSSLELECQSLGHGSAFCRRFNFHGEIYQIRMENVSFYNEESVVLWQINIF PDYPFFRVEKENYYHRDSYVQSVISNMTAKSLVVFCFYALGYKHINIAKELKITEVASKK RIKKINADINKRLGSFDLFRNKCIKTGVMYEILNVLSEYMGVKKM >gi|299857029|gb|ADWS01000035.1| GENE 34 30018 - 30200 68 60 aa, chain + ## HITS:1 COG:no KEGG:PSLT076 NR:ns ## KEGG: PSLT076 # Name: traY # Def: conjugal transfer protein TraY # Organism: S.typhimurium # Pathway: not_defined # 1 60 47 106 106 94 93.0 1e-18 MYLDEDTNNRLIRAKDRSGRSKTIEVQIRLRDHLKRFPDFYNEEIFREVIEENESTFKEL >gi|299857029|gb|ADWS01000035.1| GENE 35 30234 - 30596 439 120 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0039 NR:ns ## KEGG: EcSMS35_A0039 # Name: traA # Def: conjugal transfer pilin subunit TraA # Organism: E.coli_SECEC # Pathway: not_defined # 1 119 1 119 119 170 99.0 2e-41 MDAFLSVQGASAPVKKKSFFSKFTRLNMLRLARAVIPAAVLMMFFPQLAMAAQGQDLMAS GNTTVKATFGKDSSVVKWVVLAEVLVGAVMYMMTKNVKFLAGFAIISVFIAVGMAVVGLK >gi|299857029|gb|ADWS01000035.1| GENE 36 30601 - 30912 293 103 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0038 NR:ns ## KEGG: EcSMS35_A0038 # Name: traL # Def: conjugal transfer pilus assembly protein TraL # Organism: E.coli_SECEC # Pathway: not_defined # 1 103 1 103 103 207 99.0 1e-52 MSGDENKLKKYRFPETLTNQSRWFGLPLDELIPAAICIGWGITTSKYLFGIGAAVLVYFG IKKLKKGRGSSWLRDLIYWYMPTALLRGIFHNVPDSCFRQWVK >gi|299857029|gb|ADWS01000035.1| GENE 37 30934 - 31500 579 188 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0037 NR:ns ## KEGG: EcSMS35_A0037 # Name: traE # Def: conjugal transfer pilus assembly protein TraE # Organism: E.coli_SECEC # Pathway: not_defined # 1 188 1 188 188 362 99.0 4e-99 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLKYIRPGAQNQMKVILAEEAKRIK NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF GETDDEKK >gi|299857029|gb|ADWS01000035.1| GENE 38 31487 - 32215 520 242 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0108 NR:ns ## KEGG: p1ECUMN_0108 # Name: traK # Def: conjugal transfer protein TraK # Organism: E.coli_UMN026 # Pathway: not_defined # 1 242 1 242 242 449 99.0 1e-125 MRKNNTAIIFGSLFFSCSVMAANGTLSPTVVPMVNGGQASIAISNTSPNLFTVPGDRIIA VNSLDGALTNNEQTASGGVVVATVNKKPFTFILETERGLNLSIQAVPREGAGRTIQLVSD LRGTGEEAGAWETSTPYESLLVTISQAVRGGKLPAGWYQVPVTKETLQAPAGLSSVADAV WTGNHLKMVRFAVENKTLSALNIRESDFWQPGTRAVMFSQPASQLLAGACMDVYVIRDGE GN >gi|299857029|gb|ADWS01000035.1| GENE 39 32215 - 33666 1352 483 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0035 NR:ns ## KEGG: EcSMS35_A0035 # Name: traB # Def: conjugal transfer pilus assembly protein TraB # Organism: E.coli_SECEC # Pathway: not_defined # 1 477 1 475 475 807 96.0 0 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV KALGANPVTATGEPVPQTPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP PPQVMYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKNGKTIDMPIK GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALEQS QSTAEEGNPESPVPNPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGDKNPQGGDAGKEGG NGG >gi|299857029|gb|ADWS01000035.1| GENE 40 33656 - 34222 266 188 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0106 NR:ns ## KEGG: p1ECUMN_0106 # Name: traP # Def: conjugal transfer protein TraP # Organism: E.coli_UMN026 # Pathway: not_defined # 2 188 10 196 196 313 86.0 2e-84 MAGDALTFRVAFVVRWLLWVVRFVVIWPLATMALMALFVLWKDNTTPGKLLVKEINFVRQ TAPAGQFPVSECWFSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVTAFWATLAL MYVSLAAITGKYPVRPGKMKCVRVGTADEHLKEVYTEDTSLSEKIRKCHVYFPDDRANRN NGDKNEHA >gi|299857029|gb|ADWS01000035.1| GENE 41 34209 - 34520 168 103 aa, chain + ## HITS:1 COG:no KEGG:ECSE_P2-0070 NR:ns ## KEGG: ECSE_P2-0070 # Name: not_defined # Def: conjugal transfer protein TrbD # Organism: E.coli_SE11 # Pathway: not_defined # 1 100 1 100 102 130 77.0 2e-29 MNMRNIITARSVPDKSVSDDFMNAVLSNCTTRIVLPALKEFGSESLPHNFNMAAVGVMKK GMSMSLFSSPGNTVVSGQPCAGKTNLTVELISAVVESNKKGEG >gi|299857029|gb|ADWS01000035.1| GENE 42 34520 - 35035 291 171 aa, chain + ## HITS:1 COG:no KEGG:UTI89_P113 NR:ns ## KEGG: UTI89_P113 # Name: traV # Def: conjugal transfer protein TraV # Organism: E.coli_UTI89 # Pathway: not_defined # 1 171 1 171 171 264 91.0 1e-69 MKQISLFIPLLGTLLLSGCAGTSTEFECNATTSDTCMTMEQANEKAKELEQSSEAKPVAA SLPRLAEGNFRTMPVQTVTATPPSGSRPAVTALPEQKLLAPRPLFTAAREVKTIVPVSSV APVTPPRPLRTGEQTAALWIAPYIDNQDVYHQPSSVFFVIKPSAWGKPRIN >gi|299857029|gb|ADWS01000035.1| GENE 43 35170 - 35391 123 73 aa, chain + ## HITS:1 COG:PSLT085 KEGG:ns NR:ns ## COG: PSLT085 COG1734 # Protein_GI_number: 17233451 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Salmonella typhimurium LT2 # 1 73 1 73 73 127 86.0 7e-30 MSDEADEAYSVTEQLTMTGINRIRQKINVHGIPVYLCEACGNPIPEARRKIFPGVTLCVE CQAYQEKQRKHYA >gi|299857029|gb|ADWS01000035.1| GENE 44 35384 - 35488 76 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHKSVAEHIDLIPDEHELIFRKPKSLYMRREMAR >gi|299857029|gb|ADWS01000035.1| GENE 45 35551 - 38178 2334 875 aa, chain + ## HITS:1 COG:PSLT088_2 KEGG:ns NR:ns ## COG: PSLT088_2 COG3451 # Protein_GI_number: 17233453 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Salmonella typhimurium LT2 # 290 872 1 583 593 1135 94.0 0 MNNPLEAVTQAVNSLVTALKLPDESAKANEVLGEMSFPQFSRLLPYRDYNQESGLFMNDT TMGFMLEAIPINGANESIVEALDHMLRTKLPRGVPFCIHLKSSQLVGDRIEYGLREFSWS GEQAERFNAITRAYYMNAAATQFPLPEGMNLPLTLRHYRVFFSYCSPSKKKSRADILEME NLVKIIRASLQGASIATQTVDAQAFIDIVGEMINHNPDSLYPKRRQLDPYSDLNYQCVED SFDLKVRADYLTLGLRENGRNSTARILNFHLARNPEIAFLWNMADNYSNLLNPELSISCP FILTLTLVVEDQVKTHSEANLKYMDLEKKSKTSYAKWFPSVEKEAKEWGELRQRLGSGQS SVVSYFLNITAFCKDNNETALEVEQDILNSFRKNGFELISPRFNHMRNFLTCLPFMAGKG LFKQLKEAGVVQRAESFNVANLMPLVADNPLTPAGLLAPTYRNQLAFIDIFFRGMNNTNY NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDMGDGYKSLCENMGGVYLDGETLRFNP FANITDIDQSAERVRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFL KNASDSEQYAGSPTIRSRLDEMIVLLDQYTANGTYGQYFNSDEPSLRDDAKMVVLELGGL EDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNYKVGEFIEKGYRTA RRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQSAKEFAKYNQLYPDQFQPL QRDMIGKFGAARDQWFSSFLLQVENHSSWHRLFVDPLSRAMYSSDGPDFEFVQQKRKEGL SIHEAVWQLAWKKSGPEMASLEAWLEEHEKYRSVA >gi|299857029|gb|ADWS01000035.1| GENE 46 38175 - 38561 285 128 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM40 NR:ns ## KEGG: APECO1_O1CoBM40 # Name: trbI # Def: conjugal transfer protein TrbI # Organism: E.coli_APEC # Pathway: not_defined # 1 128 1 128 128 208 93.0 4e-53 MTTTQKTTDVTAPRRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTAAFNMKQTVDAFF DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDITREIQQDI ARRMRAEP >gi|299857029|gb|ADWS01000035.1| GENE 47 38558 - 39190 455 210 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0096 NR:ns ## KEGG: p1ECUMN_0096 # Name: traW # Def: conjugal transfer pilus assembly protein TraW # Organism: E.coli_UMN026 # Pathway: not_defined # 1 210 39 248 248 417 98.0 1e-115 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK ERVIRNSLRPPAVPGIGRTEKYSSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKALDSRIYFDQNGVLCQRL GIDQVPARVSAVPGDRFLKVEFIPAEEGRK >gi|299857029|gb|ADWS01000035.1| GENE 48 39187 - 40179 827 330 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM42 NR:ns ## KEGG: APECO1_O1CoBM42 # Name: traU # Def: conjugal transfer pilus assembly protein TraU # Organism: E.coli_APEC # Pathway: not_defined # 1 330 1 330 330 655 98.0 0 MKRRLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFPLSLGSIKVSQGKVPDT ANPSMPIQICPAPPPLFRRIGLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGTA KKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLDIAYLSEIDPTWTDSSLTTIL NPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGSQGSMYPFNGWVSNESSPLQSSL LVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKERWRYQMVNMYPDSGQCHPFGRS VMRWETGKNPPNTKKNFGYLMWRKRNCVFL >gi|299857029|gb|ADWS01000035.1| GENE 49 40209 - 40514 73 101 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0094 NR:ns ## KEGG: p1ECUMN_0094 # Name: not_defined # Def: conserved hypothetical protein, putative membrane protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 101 3 103 103 172 97.0 4e-42 MATMDSKYIQHLRKIGAVLLRLISRTLNLFPFGLVMVPVILFYFAPDSFLAEIIHEWKKA DISEQVTLVRLYLKVTFTCVFMAVFLNYLFSDEFMPVNSRK >gi|299857029|gb|ADWS01000035.1| GENE 50 40523 - 41161 468 212 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0093 NR:ns ## KEGG: p1ECUMN_0093 # Name: trbC # Def: conjugal transfer pilus assembly protein TrbC # Organism: E.coli_UMN026 # Pathway: not_defined # 1 212 5 216 216 385 92.0 1e-106 MNRKIFALFALTAGMHLAVHASENVNTTENRQFLKQQETLSQQLREKPDIQLQAWAEQQV RANPLQHSDNQFLDELVRKQQAAQKDKPQQGAVYFVSFSIPEEGLKRMLGETRHYGIPAT LRGMVNNDLKTTAEAVLSLVKDGATDGVQIDPTLFSQYGIRSVPALVVFCSQGYDIIRGN LRVGQALEKVAATGDCRQVAHDLLAGKGDSGK >gi|299857029|gb|ADWS01000035.1| GENE 51 41158 - 43008 944 616 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0092 NR:ns ## KEGG: p1ECUMN_0092 # Name: traN # Def: conjugal transfer mating pair stabilization protein TraN # Organism: E.coli_UMN026 # Pathway: not_defined # 1 616 1 616 616 1127 93.0 0 MKRILPLILALVTGMAQADSNSDYRAGSDFAHQIKGQGSSSIQGFKPQESIPGYNANPDE TKYYGGVTAGGDGGLKNDGTTEWATGETGKTITESFMNKPKDILSPDAPFIQTGRDVVNR ADSIVGNTGQQCSAQQINRSEFTNYTCERDTMVEEYCSRTASITGDWKYTDEYREVTIPH SQFRFSMNGLKLVFSVTVPVAGTVESASLSVHAGLYFLNSRYDFMNTTFNVQLVTGQSGT FTIPVPSGFSVTQGQVLTGSGCTANGNCLPHGNGDRKVYESLVSGASTFTLKLRMKVRDK EWVPRVEWVESCPFNKADGVLKGTECSEPGGTKTGVMEGKPWSITQACWAYRDKYVTQSA DNGTCQKYVDNPACTLASRQCAFYSDEGTCLHEYATYSCESKTSGKVMVCGGDVFCLDGE CDKAQSGKSSDFGEAVSQLAALAAAGKDVAALNGVDVRAFTGEAKFCRKAAAGFSNCCKD GGWGQDVGLAKCNSEEKALGKAKDNKLTVSVGEFCSKKVLGVCLQKKRSYCQFDSKLAQI VQQQGRNGQLRIGFGSAKHPDCRGITVDELQKIQFDRLDFTNFYEDLMNNQKIPDSGVLT QKVKEQIADQLKQAGQ >gi|299857029|gb|ADWS01000035.1| GENE 52 43035 - 43292 99 85 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM45 NR:ns ## KEGG: APECO1_O1CoBM45 # Name: trbE # Def: conjugal transfer protein TrbE # Organism: E.coli_APEC # Pathway: not_defined # 1 85 2 86 86 146 94.0 3e-34 MKVIFTSNRLVDFLIRLLITAIVISPVIIWSWDTVKETTADGMLAAAFVILYSGVLLFIL YFCFSALTGLQKADERKNDERNEDE >gi|299857029|gb|ADWS01000035.1| GENE 53 43285 - 44028 624 247 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0084 NR:ns ## KEGG: pECS88_0084 # Name: traF # Def: conjugal pilus assembly protein TraF # Organism: E.coli_S88 # Pathway: not_defined # 1 247 11 257 257 478 97.0 1e-134 MNKALLPLLLCCFIFPASGKDAGWQWYNEKISPKEKENKPVPAAPRQEPDIMQKLAALQT ATKRALYEAILYPGVDNFVKYFRLQNYWTQQAGLFTMSAKKAMLAHPELDYNLQYSHYNG TVRNQLAADQAQQRQAIAKLAEYYGIMFFYRGQDPIDGQLAQVINGFRDTYGLSVIPVSV DGVINPLLPDSRTDQGQAQRLGVKYFPAMMLVDPKQGSVRPLSYGFISQDDLAKQFLNVS EDFKPKF >gi|299857029|gb|ADWS01000035.1| GENE 54 44158 - 45138 593 326 aa, chain + ## HITS:1 COG:yi52_g5 KEGG:ns NR:ns ## COG: yi52_g5 COG3039 # Protein_GI_number: 16129331 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Escherichia coli K12 # 1 326 1 326 326 637 99.0 0 MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLETM LRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQ LFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAH IGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWL IAERPGRVKTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKND NQLAMLFTLANLFRVDQMIRQWERSQ >gi|299857029|gb|ADWS01000035.1| GENE 55 45595 - 45780 63 61 aa, chain + ## HITS:1 COG:ECs1372 KEGG:ns NR:ns ## COG: ECs1372 COG1662 # Protein_GI_number: 15830626 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli O157:H7 # 1 61 37 97 167 119 98.0 2e-27 MIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVV V Prediction of potential genes in microbial genomes Time: Sun May 15 22:40:58 2011 Seq name: gi|299857028|gb|ADWS01000036.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont35.1, whole genome shotgun sequence Length of sequence - 45143 bp Number of predicted genes - 49, with homology - 47 Number of transcription units - 18, operones - 10 average op.length - 4.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 329 364 ## HCM2.0049c hypothetical protein 2 1 Op 2 . - CDS 343 - 666 325 ## HCM2.0050c hypothetical protein - Prom 706 - 765 4.1 3 2 Tu 1 . - CDS 989 - 1555 0 ## - Prom 1592 - 1651 3.9 - Term 1779 - 1834 -1.0 4 3 Tu 1 . - CDS 1942 - 5466 709 ## ECUMN_1364 side tail fiber protein from bacteriophage origin 5 4 Op 1 5/0.000 - CDS 5560 - 10287 2171 ## COG4733 Phage-related protein, tail component 6 4 Op 2 6/0.000 - CDS 10305 - 10898 321 ## COG4723 Phage-related protein, tail component 7 4 Op 3 6/0.000 - CDS 10886 - 11683 290 ## COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily 8 4 Op 4 5/0.000 - CDS 11676 - 12374 426 ## COG4672 Phage-related protein - Prom 12395 - 12454 1.6 - Term 12383 - 12419 6.4 9 4 Op 5 1/1.000 - CDS 12457 - 12792 169 ## COG4718 Phage-related protein 10 4 Op 6 . - CDS 12835 - 17412 2749 ## COG3941 Mu-like prophage protein 11 4 Op 7 . - CDS 17420 - 17653 161 ## YPMT1.12c hypothetical protein 12 5 Tu 1 . - CDS 17770 - 18087 465 ## YPDSF_4041 hypothetical protein - Term 18102 - 18133 4.1 13 6 Op 1 . - CDS 18149 - 18895 780 ## COG5492 Bacterial surface proteins containing Ig-like domains 14 6 Op 2 . - CDS 18970 - 19353 204 ## YPDSF_4043 hypothetical protein 15 6 Op 3 . - CDS 19355 - 19828 413 ## HCM2.0062c hypothetical protein 16 6 Op 4 . - CDS 19819 - 20163 211 ## YPMT1.17c hypothetical protein 17 6 Op 5 . - CDS 20243 - 21076 465 ## HCM2.0064c hypothetical protein 18 6 Op 6 . - CDS 21076 - 21510 300 ## HCM2.0065c hypothetical protein 19 6 Op 7 . - CDS 21555 - 22475 393 ## COG5492 Bacterial surface proteins containing Ig-like domains - Term 22482 - 22514 4.6 20 7 Op 1 . - CDS 22549 - 23424 1020 ## YPDSF_4049 hypothetical protein 21 7 Op 2 . - CDS 23450 - 24337 950 ## YPDSF_4050 hypothetical protein 22 7 Op 3 . - CDS 24359 - 25933 908 ## YpAngola_0077 hypothetical protein 23 7 Op 4 . - CDS 25960 - 27216 575 ## YPDSF_4052 hypothetical protein 24 7 Op 5 . - CDS 27216 - 27848 596 ## HCM2.0071c putative DNA-binding protein - Prom 27980 - 28039 9.0 - Term 27853 - 27888 2.5 25 8 Op 1 . - CDS 28044 - 28310 214 ## YPDSF_4054 hypothetical protein 26 8 Op 2 . - CDS 28320 - 29210 460 ## COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain 27 8 Op 3 . - CDS 29216 - 29470 187 ## YPDSF_4056 hypothetical protein 28 8 Op 4 . - CDS 29463 - 30101 583 ## COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain 29 8 Op 5 4/0.000 - CDS 30098 - 30766 618 ## COG1475 Predicted transcriptional regulators 30 8 Op 6 4/0.000 - CDS 30766 - 31308 468 ## COG1475 Predicted transcriptional regulators 31 8 Op 7 . - CDS 31316 - 31447 98 ## COG1475 Predicted transcriptional regulators - Prom 31476 - 31535 6.5 + Prom 31438 - 31497 4.6 32 9 Op 1 . + CDS 31530 - 33089 792 ## COG1061 DNA or RNA helicases of superfamily II 33 9 Op 2 . + CDS 33092 - 33346 267 ## YPDSF_4061 hypothetical protein + Prom 33358 - 33417 5.1 34 9 Op 3 . + CDS 33438 - 34004 296 ## gi|293411878|ref|ZP_06654603.1| predicted protein + Prom 34065 - 34124 4.9 35 10 Op 1 . + CDS 34318 - 34638 238 ## gi|293411877|ref|ZP_06654602.1| predicted protein 36 10 Op 2 . + CDS 34654 - 35253 205 ## gi|293411876|ref|ZP_06654601.1| predicted protein 37 10 Op 3 . + CDS 35250 - 35774 76 ## HCM2.0081 putative transcriptional regulator + Term 35786 - 35824 6.2 + Prom 35807 - 35866 5.7 38 11 Op 1 . + CDS 36070 - 36720 586 ## HCM2.0083 hypothetical protein + Term 36736 - 36760 -1.0 39 11 Op 2 . + CDS 36768 - 36998 217 ## YPDSF_4151 hypothetical protein + Term 37003 - 37035 4.7 40 12 Tu 1 . + CDS 37380 - 37532 99 ## + Term 37590 - 37617 -0.1 - Term 37578 - 37605 -0.9 41 13 Tu 1 . - CDS 37615 - 38097 255 ## HCM2.0085c hypothetical protein - Prom 38239 - 38298 3.5 - Term 38250 - 38301 1.4 42 14 Tu 1 . - CDS 38448 - 38822 309 ## SG0273 hypothetical protein - Prom 38850 - 38909 5.7 - Term 38896 - 38928 3.0 43 15 Op 1 . - CDS 38940 - 39380 470 ## HCM2.0087c hypothetical protein - Term 39390 - 39429 -0.9 44 15 Op 2 . - CDS 39461 - 39772 240 ## HCM2.0088c hypothetical protein - Prom 39804 - 39863 3.8 45 16 Tu 1 . - CDS 39927 - 40256 300 ## gi|293411867|ref|ZP_06654592.1| predicted protein - Prom 40318 - 40377 3.9 46 17 Op 1 . - CDS 41810 - 42415 332 ## azo2628 hypothetical protein 47 17 Op 2 . - CDS 42492 - 42677 190 ## gi|293411865|ref|ZP_06654590.1| predicted protein 48 17 Op 3 . - CDS 42714 - 43013 193 ## HCM2.0094c hypothetical protein - Prom 43046 - 43105 4.6 - Term 43121 - 43153 3.0 49 18 Tu 1 . - CDS 43175 - 45133 2256 ## COG0143 Methionyl-tRNA synthetase Predicted protein(s) >gi|299857028|gb|ADWS01000036.1| GENE 1 2 - 329 364 109 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0049c NR:ns ## KEGG: HCM2.0049c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 108 1 108 230 209 92.0 2e-53 MKTPRGIRNNNPGNLDKGSPWQGLVANPDEPRFCTFKDPVWGIRALAVTLITYHDKRRAK DGSSIDTIREVIERWAPPNENNTDTYINEVSKAVGVTADMIIDLHDYDI >gi|299857028|gb|ADWS01000036.1| GENE 2 343 - 666 325 107 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0050c NR:ns ## KEGG: HCM2.0050c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 107 1 107 107 188 93.0 5e-47 MSNEMAGVTTEQVERIAAIVAREVVGKLGKELREEIGQEVNNQLKTYFGDMTPAQHSIQH SNLDKLLNRLDSISSGFFGGIVSKITSFIITALLLGLAAYGVKNGLQ >gi|299857028|gb|ADWS01000036.1| GENE 3 989 - 1555 0 188 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSPSLSPIVFQRKQVVSLSGGTEFNTQISPDRSPMIFVAYSKAVSLIANRIVRNNQVIYS FGGQGSDSSATIYVFSKGIAKKETWGMSFFNARGEEIYNTANIPLSFTFLNNTEWNSSGG HVFDYPPAIIPTYANVFAVPVPGGAMTMVYGYAAYGNTVSSIFVNQLNGGHSFSVNGRVP VINRNLYN >gi|299857028|gb|ADWS01000036.1| GENE 4 1942 - 5466 709 1174 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1364 NR:ns ## KEGG: ECUMN_1364 # Name: not_defined # Def: side tail fiber protein from bacteriophage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 205 769 208 772 1008 526 92.0 1e-147 MWYREGTITFTQGSNTLVGAGTAWNVTANGVLPGMIVIGPDNKLYEIKRVTSDTNIVLSE PYTGETQSEVPCRIITTYEGDLTQFSARFTALMSRMSADSKSIRSWLTALDEVTIEREDG TEVTVKPLMQIVNEHNENVEWYKNNTDAIDAAGDKAREAAASAAAAAKSANVAGEKASQA SQSASAAASSQSAASASATAAKKSETNAAASQKSAATSASTATTKASEAATSARDAAASK EAAKSSETSAASSAGSAASSATAAGNSAKAAKTSETNARSSETAAGQSASAAAGSKTAAA SSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEATEQASAAARSASAAKTSET NAKASETRAESSKTAAASSASSAASSASSASASKDEATRQASAAKGSATTASTKATEAAG SATAASQSKTAAESAATRAEAAADRAEEIAGAVAMEDASLTTKGVVKLSSAVDSTSESLA ATPKAVKTVKDSSVQKTGDTMGGQLKIGTINALRIFNQAFGLIFRRSEDYIHLIPTNEGE GENGDIGSLRPFSINLRSGLVSIGNGLKVGGSVTGKLTGNADTATKIKTARKIGGVAFDG SADINLPGVNATGNQNTTGNAATATKLQAARTINGVSFDGSANITLTPSNIGALALTGGT LSGGLTAAGEIISKSANGLRIAYGNYGFFIRNDGSNTYFMLTDSGNSLGTYNSLRPFIIS NSTGNVTIATKLNASGGITGSLSGNASTATKLQTARTIGGVSFDGTANINLPGVNAAGNQ NTTGNAATATKLQTARTINGVSFNGSANISIPTITSRGRVTALTGTTQGAATGLQMYEAY NNGYPSTYGNVLHLKGATAVGEGELFIGWSGTSGAHAPVHVRSRRDTDTSSWSEWAQVYT SKDSIPGVNATGNQNTTGNAASATKLQTARTIGGVSFNGTANINLPGVNIAGNQNTTGNA ASATKLQTARTIGGVSFNGTANINLPGVNTTGNQNTTGNAATATKLQTARKIAGVAFDGS ADITLTAANLNAYTKTEVTNLLSSYVKSSSLPSMTVRTSSVSGGDMGMSLSTFISHLKSN GAFSKSYWIGFGDAMGFNAGSINNITGFGAVELAESIIEVFNLPNGDYTIRLTTSHKADY GGVTNAILVYHYRSNRSPSGQWLKFAGTVGATSN >gi|299857028|gb|ADWS01000036.1| GENE 5 5560 - 10287 2171 1575 aa, chain - ## HITS:1 COG:YPMT1.06c KEGG:ns NR:ns ## COG: YPMT1.06c COG4733 # Protein_GI_number: 16082788 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Yersinia pestis # 1 1334 3 1302 1545 1873 75.0 0 MEQFKKKKLPLFIAGAGGKKSSKSSSRTPVEADDTVNSRAMAAILDLLGEGVIGGLVNGA RSIFIDDLPIVNEDGSSNFSGITWDFRDGSQDQTPMSGFDFVETPKSVNIQLKKTHYVTV SIDNDEADRVRVIMKFPSLRSIDKKTGDTNGTTVEYKFQIANGDSTFVDVVAEGEKSVGI KLTAKKTGVYYRSYELKLPKPGRAYKVRVVRITDDNSSQYLYNDTWVDSIGEIVDTPMNY PNSVLVGLKVNSEQFGSTMPSRSYLVRGLKIRVPSNYNESSNTYAGVWDGTFKLLSSSNP AWILFDLLTNARYGLGQYVSESMIDLGQLYQIGRYCDEEVDDGFGGKEKRFAINTQITSR QDAYRLIQDIAGAFRGMVFWAGGMVNIMQDSPSDPVMMFTNSNVKDGLFTYKGSARKDRP SVALVTYNNKEDGYKQNIEYVEDQDAMRRYGERKTEVVAFGCTSRGQAHRVGLWLLYTAR MESDVITFTAGLDASFLMPGETVLIQNKYRAGKRNSGRIVEFTKNSITLDAPVSLAKSGS FIRILNQEGKIVERDVLETGENITKVTFSKALSSAETPVLNGVWTITEPDLEPMRVRIVN IAQGETPGSFDITAVENNPSKYEAIDNGATLIPQNTTVLDPTYSKPSNLQITEGTYLSSP GNLSVKLTATWEGKSPEYWISWRRSDENNVSNWQSARVTEEQYEIVNVAENGRYDFQLYA VSFNGKKTEIISTVYQVLGTMTPPDAPTSLTAVGDYRNVILNWVNPDSVDLDHINVYASQ TNNLDTAKLIAESASTTFTHAGLGDSETWYYWVRASNKRGMLSPPNSNLGTEATTRDVLS FLTGKITSSELGQALLEDINSKVSQEAVDELNEHINQSVESLEGAVNDVKEDIAELDKQF SDNLAGFEIKFNERSDALENAQTELKGEVSATIDKVNEAFEKIDATDAAIVEIENTVSEH DKALANTVEAIKAARDEAAALIAKESEARVEGDAANAKQLEVLQSTVEESSAAVEEMKKT VAEVDRASAELTTNIEALAKTNIDLALRQDEDQHKQMVNNAKIATTQKTFADDMSAMATK IEEIRVEIGEDIKASILEESTARADGDEALAKRVTQLQSKFEGDISAAISTEQEARTSAD EALTTQITQLESKVSNDIVAAIKEEQEARATEDSALASQITQLQAKVDDDISAAIRSEQE ARASGDSALAKQINQLQSKVDGDISAAITQEQEARASADQALSREINSLRAQTGTDIAAA VAVETKARTDADSALSTQITSLTAKANDLKASLARETTARADGDTALTKEVSSLKAQTAK DISAAVAVETQARTDADSALSSQITKLTSQYKEDIKAAVATETKTRTEQDAALATQITNL ESQTAANISAAVTTETKARTQADNALSGRIDTLKAEVNGNTATIQQQATAIADTNKKVST AWTLKMETSTSGGQKYVAGIALGIDTTGLSQFLVQADRFGLVNSVNGKITTPFVIENSIA YMNGAYIKDGTITNAKVGDLQSTNFVSGRSGWRFGKNGTLEINGNSGGNGRLVINGQRID VYDDNNVLRVRIGRL >gi|299857028|gb|ADWS01000036.1| GENE 6 10305 - 10898 321 197 aa, chain - ## HITS:1 COG:YPMT1.07c KEGG:ns NR:ns ## COG: YPMT1.07c COG4723 # Protein_GI_number: 16082789 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Yersinia pestis # 1 196 1 195 195 357 89.0 1e-98 MSELVHVQLGGPMAKHFGRHWHLKVRNTKQALDLIEANKPGFKAWMKRNIKTYDRYHIQI TNKQGHKWSVDESEYQMMGQSDNIAKIRITPVPRGSGGSAFGWFQTVVGAALLVVSAVVM PALAPLGLSLMMGGISQIISPQATNESVRQADNSNSYYFDGPQNTENQGNPVQLIYGEEI LVGSQVVSSSITIDQLM >gi|299857028|gb|ADWS01000036.1| GENE 7 10886 - 11683 290 265 aa, chain - ## HITS:1 COG:YPMT1.08c_1 KEGG:ns NR:ns ## COG: YPMT1.08c_1 COG1310 # Protein_GI_number: 16082790 # Func_class: R General function prediction only # Function: Predicted metal-dependent protease of the PAD1/JAB1 superfamily # Organism: Yersinia pestis # 1 143 1 143 143 285 89.0 8e-77 MGNKAIPELGSDVMQQIYLCAINRYPNEACGFLVRTNGDKYRFMEARNVSENPQNTFVMH VDDIMAAEDAGDVIAIWHSHTDESAEASDADRAGCEATEVPWMILAIRKNVEGDAPFHFS EMNVITPDGFEMPYLGRPYVFGVFDCWMLCRDYLKREFNVELNPNAHLHIPSWYTGDNDI LDQNYRNERLVRLAPGTEPQRGDVFFIQYGKMPDHCAVYIGDGMILHHQIDRLSCRAYYG GMYQKHTTHHLRHRDLLKGDETCLS >gi|299857028|gb|ADWS01000036.1| GENE 8 11676 - 12374 426 232 aa, chain - ## HITS:1 COG:YPMT1.09c KEGG:ns NR:ns ## COG: YPMT1.09c COG4672 # Protein_GI_number: 16082791 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Yersinia pestis # 1 232 12 243 243 482 96.0 1e-136 MGIKADIQSLSPSALIELFVLDMSNTTSGGKLFFHAGTNELMQPVVWQGVTYEPWPIKAS GFDKTGQGTLPRPKIQVSNFAGTVSAEVQANDDLVGCRIIRKMTLARFLDAVNFKDGNPT ADPNQHFPDEMWFIEQKTLETHQVVEFELSSVFDLMGVQLPYRQIIKNTCPWKYRGPECG YTGPYFDKNNQQTSMSGADYCTKRYDACNARRNYFANGVIHFGGFIGATRYG >gi|299857028|gb|ADWS01000036.1| GENE 9 12457 - 12792 169 111 aa, chain - ## HITS:1 COG:YPMT1.10c KEGG:ns NR:ns ## COG: YPMT1.10c COG4718 # Protein_GI_number: 16082792 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Yersinia pestis # 1 111 1 111 111 194 86.0 2e-50 MERQTFNWYPDYESEKSVKPNVTVLNFGDDYEQRQAQGLNRIKEEWSLTFTRSYNEINAV DDFLTERSGVESFYWVNPRGKQIVVVCDSHTVKRYQGYCVLTATFRQVFEA >gi|299857028|gb|ADWS01000036.1| GENE 10 12835 - 17412 2749 1525 aa, chain - ## HITS:1 COG:YPMT1.11c_2 KEGG:ns NR:ns ## COG: YPMT1.11c_2 COG3941 # Protein_GI_number: 16082793 # Func_class: R General function prediction only # Function: Mu-like prophage protein # Organism: Yersinia pestis # 247 683 1 437 450 677 89.0 0 MSQNVEFILSLEDKQFTASIDRAGKLLTRFGEQVTKPAQKIQTFERSLGSVARIIGVLES KLDSTADKLQDVAAGFELASDATRKMRGNITSLNSGLKALIERLDTTTSSVDKLTASLRK VQSELNDFSDWATYASKSASRFGTEAKEASASVSGMNTRLNTTTKRLSNWGVTTSQAAEG LKKVREQMDEVIGRQQLISKPVRVRTSGSGDGGSGRRSGASGHSGKSNEGGMFSGLRGNI FLLGEIGDAARTVTDIMFGWQKPIVEAAAEMERMRVMLRGLNKEKSNPGQAAADDMKYIV DMAQNAPFAMQALTDSFVKFRSAGLDPTDGSLKALVDSVARFGGDSELLKRAAVAVQQMS GKGVVSMEELRQQLGEAVPNAMQAMADAAGITMGELTKAVASGTVEAKQALSLMFVGLRA ENENAAKDMMQTYTGALAQLQTSFTLFADRVGQAGYLDSLSKGMKELASIMNSAEGISFA NSLGSGLTTAIDGLRQLAQWLAKNQELVINLGKVVAAMVAFKLMRAGIMGVVGAGSQMVS TFATMATAIQTPFNLGATAVTRFNRAARMGLAPIPSLIFAIRGAITGLKGAFAGLTAFIA ANPIGAAFTVATVAVAGLITYMTMLRSETSKVVDEIRKIPEAMTAAKRAQMAEYKARLEQ QITQKEQELKSGEKVVYGPGMAGTTVKINQDERKRIENELNDLRKKRDKTTGAIERGDIA VAKRLAKDAAESQIEKIREENRDFAATFAKARQEALEKIQKINDDDSLSDDEKNKLLAPL RETVNKSYLEPAQKLVDSLSSRKNAVEGQIATLNDQLEKAKKEGNTEQIKKLQGSIRGYQ ENLEVVAQELTQAEFERDNAAKTGKGVMSNQGTVLGLGTTDKAAQKALAQYMRNQMDSAT YQRTLPDGTPMMDFEGKPIIGPKQLKTQLNLQKASSASSLEKMSDEERAAAIAALTKARE QDAAAAEKAAQRSANASQRAAKKEQAAQQKLAAGYQKALDKADQLMGQMGESSKATVSFD QSLRDTTKSLTDLANAVPNEFITQEMIDKAKKRLEDLKNATPEYREMFNRRNVEQMISTW APEADSIISAGYTPSREEKVADFEDTYNRNLKALIELRDKASDPKVVALYTKKINQLIAA GNTALIKETGTATQKLALEYENLAEQIESTWTDLFSGLTDVLTDFVINGKMSFSSLSQSI LKDITNMVVKSQITLPLMNMLGMGTTAAGSSQSGNLLTGVASAVANQGVRMGNTVNGDKS VGEATKETSSSVTGLGQTTQQTTSAIGTATNAIGSWVSGLFDSTEAKDAETKAVKDSIFS MQNLSSVTGALSAAFAMLGANASGSGNKWLSFGATVASGLVSAWAGGGFDGLMSGSSGST SGFNNLTSSAADGTNGIPAIPKFANGGIFGKDGVIPLRAYQKGGIANSPQLALFGEGDMN EAYVPLPDGRTIPVTLSTDGMSGGGNVLSPVSIEINVHSDGSTTESGDTESIWNNAAQRM KAIALETIAQEKRPGGSLNPNTQRN >gi|299857028|gb|ADWS01000036.1| GENE 11 17420 - 17653 161 77 aa, chain - ## HITS:1 COG:no KEGG:YPMT1.12c NR:ns ## KEGG: YPMT1.12c # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis # Pathway: not_defined # 1 77 13 89 89 134 93.0 8e-31 MFWMLSRNIDRLRAEEDVRNLQVARASQADGEAVKAFMEGLQLRIGRPVVTDKVFDPSQD KADPDAKEQLMQIFGRG >gi|299857028|gb|ADWS01000036.1| GENE 12 17770 - 18087 465 105 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4041 NR:ns ## KEGG: YPDSF_4041 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 105 1 105 105 174 97.0 7e-43 MTKLLDLDSILPPKKSIKFGGKEYPIVEMTVGLFVSIKQMEGKDLMNMSPVEQVTAYADL VRKVIPSVPDEVLEKLTVPQLQQIFTFAMEVIDEENEKAAGEGAK >gi|299857028|gb|ADWS01000036.1| GENE 13 18149 - 18895 780 248 aa, chain - ## HITS:1 COG:YPMT1.14c KEGG:ns NR:ns ## COG: YPMT1.14c COG5492 # Protein_GI_number: 16082796 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 1 247 1 247 248 336 82.0 2e-92 MSNTHVKNIKLGACKVSFGGVDLGYTKGGVQVEIATETLKVTVDQLGQTTISELIQGRNI TITAPLAESVLKNMVDLMPGSTLSSGEDTVTITSAQGVNLIDVAKELVLTPQDATDYVLT IPKAATAGNFTMTYQSDDVRVFSVEFSAYPDDAGVLGKMSLPKPVESVTLTPSSPTVKVG TKVQLSATFTPADATNKTGVWSSDATDKATVDQNGLVTGKAVGSANITFTTNDGAKKATK AVSVTAAS >gi|299857028|gb|ADWS01000036.1| GENE 14 18970 - 19353 204 127 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4043 NR:ns ## KEGG: YPDSF_4043 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 127 1 127 127 219 83.0 3e-56 MFIEAFASLMQKAKIGTVGTDIFCHYLPANVKSGVLLINPNTGISIDHELQGFYHESFTI IVRGSSITTTVEKANKIIEMFPVEETESGGVYFRLVRPMAMPIIYPKNDGALIEAGIPVE FAGYLLN >gi|299857028|gb|ADWS01000036.1| GENE 15 19355 - 19828 413 157 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0062c NR:ns ## KEGG: HCM2.0062c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 157 1 157 157 263 89.0 2e-69 MGLKYDAHQFKRAGNRLNNSQKAFKRYLIRDMEKLARLVERLSRAMAPLETGSLETAIFA RVIKEGYSGLRIELSVSGAKPRQGHPGVEVGDYAKYMELGKYRLGYLSRMKNVTNPPIAG VKPRVGPHFLERAVEISEKQFSEAILEAARKAGFRRG >gi|299857028|gb|ADWS01000036.1| GENE 16 19819 - 20163 211 114 aa, chain - ## HITS:1 COG:no KEGG:YPMT1.17c NR:ns ## KEGG: YPMT1.17c # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis # Pathway: not_defined # 1 114 39 152 152 214 95.0 8e-55 MNISWQTEIAIYRFGAKNVYGEAQLQFVRKTNVGVVKFEQSNEKSSVRADSSGSRGKASL ELFDAVLVVPLEAAVQLDDVLILEGQKLKVSSVHRRWGLRGRPGHLEVGANIWV >gi|299857028|gb|ADWS01000036.1| GENE 17 20243 - 21076 465 277 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0064c NR:ns ## KEGG: HCM2.0064c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 277 1 277 277 509 92.0 1e-143 MAQIDSYRSGEAVSLSFAFNVLDIESATYTVKDSTGAILVDGEPLEITSGQMSIPVVVSA EYNQLSEKERDLRYVIVKAVASGLTHEERQMYVLLNSFELSIPEQSFATVADAQMQAIDM LNGDTLLSDGEGLMRKRLIEATRRIKTLPFSIRKILRIDFDRYDRPQNMLNVYDIPWGAD GAYRHDLVDWEKMTQEKFEEFPDYFKEALMLAVVNEACEIANGNDVAAAREDGILSESIG ETTNMYRTGKAANVHVARSTWRLLVSYINNRMIVRRA >gi|299857028|gb|ADWS01000036.1| GENE 18 21076 - 21510 300 144 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0065c NR:ns ## KEGG: HCM2.0065c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 144 1 144 144 219 82.0 2e-56 MKPAKIVLLEPQFSGYSGMLCGVQFENGVSVAELPFIDQQRICASMRASTVEGKNVSPSA AYSDRGELTADLITEPAAPDIVPMKRGTPDEPAKQIQAFTREELESIADNEGIAGLRVIG NQVGVKAKGIVEMIEGILKAQGGE >gi|299857028|gb|ADWS01000036.1| GENE 19 21555 - 22475 393 306 aa, chain - ## HITS:1 COG:YPMT1.20c KEGG:ns NR:ns ## COG: YPMT1.20c COG5492 # Protein_GI_number: 16082802 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 1 220 1 220 220 251 80.0 2e-66 MPEQKMKITEEAFSDFTGHMCRAGFTNSISDEPLTERQQSQLSACLQAVPFSQSVNITPA SPSVLVGKTVQLSAGISMGKSASSFTWKSANDQIATVNGTGLVTGVAPGKVKITATDQET QLSASVEVTVNPVAVKSVTVTPDSTSVEKGKSVSLKANVQPSNATNKAVTWSSKNEDKAT VDQSGNVTGVEVGTATIEIVSQDGSKKATATVEVTAPVVAVTGVEIDPNSTTVEANKTVQ LTANVEPAGATNKTVTWESKNTEFATVDSETGVVTGVAAGTATIEVTTQDGSHKATATVE VTAAQE >gi|299857028|gb|ADWS01000036.1| GENE 20 22549 - 23424 1020 291 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4049 NR:ns ## KEGG: YPDSF_4049 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 291 1 291 291 552 94.0 1e-156 MPLLREEAEKLSNNELEQGVIETIIDRDDLFAILPFMKINSKAYLYNREKTLSEATFIDV NDTITEGAATFEEKVAKLRILAGDVDVDKFLATTMADTNNQLAIQVRQKVKGLARAFRRN LIVGDSTTNNKAFDGIPRLMHADQKIDIAGASMTFSMFDELVDAVKDLGADCIMMRSEHL RAYRALLRTVNVGPSEIMMENFGRPMLCHNGVPFIVNDFIPTDAGKASIYCLHLSEENGV TGLYGGDNAGIVVENIGTVQNKDAVRTRVKWYCSLANKHDKAIAALTNVKI >gi|299857028|gb|ADWS01000036.1| GENE 21 23450 - 24337 950 295 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4050 NR:ns ## KEGG: YPDSF_4050 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 295 1 298 298 399 89.0 1e-110 MNLWQMLLARRGLMDVAEAHERGGAGGVAADNEQSTQDPDKQGEQKEQPKGDDEYAGMTQ EELLAELRKTKKAGAELLKENMKRKEKERTLADQLAQYGDIDPARARQLLEAEQAAENAR REAEQAELERRGEFDAVKKQMIEAHQAELAQRDERYTALESENASLKSQLVEMTVGASFS NSLFLRDKVLMTPAKARVIYGSHFEVGEDGSVVGYDKPAGHKERAVLVDGEGKPLPFESA IERIVRADPEADALMRSEAKQGVGSHSKSTYTISQPKNKSTMDKLASGLGKIGLK >gi|299857028|gb|ADWS01000036.1| GENE 22 24359 - 25933 908 524 aa, chain - ## HITS:1 COG:no KEGG:YpAngola_0077 NR:ns ## KEGG: YpAngola_0077 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Angola # Pathway: not_defined # 1 524 1 524 524 972 93.0 0 MELNDKQIKDLVARRHPEYEKKKEHWDFLASTYAGGRGWFTDNIFRYFKEGDQEFKERVE RAYRFNHTREVVNLINKYLFKEDIHRNIEEAPEQIRNFWKRATRQNASIDSFMAAIDLQS SIYGRIWVVVDSTMSGDVESVADEKKKDARAYAYWISPQQMLDVAWDDDGNMLWALIVEV ARDDADPFTSTGQEYQRYRLWTQNEWYLFREEVKKGAGGAGRRQAKVILEDSGEHNLGVV PVFPVDCIGESESPYFSPSLIDDIAYLDRAVANYLSNLDAIIQDQTFSQLAIPVQSLLPG DENHTKVLEMGTKRVFTYDSEGGNQPFYLSPDPKQAQMIITTIKTVINEIYHSVGVAGER TKQDNAQGIDNSSGAAKMYDFQRVNSLLVTKAERLERAERQIMLLVAKWMGADLDEDHSL IAYPESFDIRGLTDEFSVAEKLSLLQAPDSVRRHQMEMLIEKIFPNITEAMKKEFDKDLL NFPPKNDLNTLENKSVLTYDRGAAQESGQDQPRGNGDSSTQENE >gi|299857028|gb|ADWS01000036.1| GENE 23 25960 - 27216 575 418 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4052 NR:ns ## KEGG: YPDSF_4052 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 418 1 418 418 837 96.0 0 MAIPSSLSLVQLHSGQMKVFQSPHRFKVVCAGRRWGKSRLSISTIIRAAAKEKKQRVWYV APTYQMARQILWDDLQEVLPRKWVRKKNDTTMTIVLKNGSEIALKGADKPDTLRGVALHF VVLDEFQDMKADTWYKVLRPTLSSTRGGALIIGTPKGFSEFHKLWTIGQNVELQRKGQWK SWQFVTADSPFVPTAEIEAAKNDMDPKSFAQEYLASFENMSGRVYYPFDRNVHVKPLQFN PRLPIWVGQDFNIDPMSSVILQPQPNGELWAIDELVLFSSNTAEVCDELERRFWRWKSQV TVFPDPAGAYRQHARGESDVDIFKEKGFLRVDYSKKHPPIADRVNAVNRMLMSASGDIRL YIDPKCKHLIDSLEKVIYKPGTRDMDKTGGIEHSADALGYPVHRRYPVKNRVILGGSR >gi|299857028|gb|ADWS01000036.1| GENE 24 27216 - 27848 596 210 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0071c NR:ns ## KEGG: HCM2.0071c # Name: not_defined # Def: putative DNA-binding protein # Organism: S.typhi # Pathway: not_defined # 1 174 1 174 213 246 89.0 3e-64 MTVEKDEVKTRLTPAEWAEAEAKWTSGEYTLSKLEEEYGIRRETLSRHFKKRGLEKGADS VGKMVRESLKSDAELRAKARAEKIEERRTRYDGWAYALGQMVMVEVTTAKREGKPLGAIE DSLKSLQRASNTLAKCFEVSSKALGMDHAENDEEEIPNLVFGELTPSQVAKLRQEDDEPE IIDDELLETLEEEALSEFDATDDGSEGEDE >gi|299857028|gb|ADWS01000036.1| GENE 25 28044 - 28310 214 88 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4054 NR:ns ## KEGG: YPDSF_4054 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 88 1 88 88 112 88.0 3e-24 MTLTDKQKDIIKTLNLGYERGHLLDLDELLEVLPYKTTKQSIQFSIRALIKKGLVEKGHT RQRSDNRYHRRTLGLTTLGRAKAKLLVM >gi|299857028|gb|ADWS01000036.1| GENE 26 28320 - 29210 460 296 aa, chain - ## HITS:1 COG:YPMT1.26c KEGG:ns NR:ns ## COG: YPMT1.26c COG2401 # Protein_GI_number: 16082809 # Func_class: R General function prediction only # Function: ABC-type ATPase fused to a predicted acetyltransferase domain # Organism: Yersinia pestis # 1 296 4 299 299 578 98.0 1e-165 MADIIIKRYRPEEFPRHLDFLERMTVTKGTVEDWHALKSLHYKTDGKPFAPTYYRCELDD RLVGVVVMAYPKLLLAPRHRMFPKLKPTTNTTVANQYWGRYVNNNFAVISRSVVDTQYRG VGVSYRMINLVSRMHDRPIIEIQSSMSKYNPFAMKAGFKFIRPERPKSYESALRVFQRHF RSDPGDNEAIVKELFAMSESRRRRALRDLVADYHKNSSLAKAGRNRGTTIQDIADSLVDE ASIVKLLKDIHNLSFTSPLYGVYRNPDFGRRLPDTLPLLAFDKQPLDKPLEIALPA >gi|299857028|gb|ADWS01000036.1| GENE 27 29216 - 29470 187 84 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4056 NR:ns ## KEGG: YPDSF_4056 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 84 1 84 84 157 98.0 8e-38 MPDLKIVELKPSKETDNNNVEVIRLLEEALQHAREGKSQSLALLMINNDGSVLDCWHNGG RPYVMVGAMESLRLDFINANIERR >gi|299857028|gb|ADWS01000036.1| GENE 28 29463 - 30101 583 212 aa, chain - ## HITS:1 COG:YPMT1.27c KEGG:ns NR:ns ## COG: YPMT1.27c COG2401 # Protein_GI_number: 16082811 # Func_class: R General function prediction only # Function: ABC-type ATPase fused to a predicted acetyltransferase domain # Organism: Yersinia pestis # 1 212 21 232 232 394 98.0 1e-110 MSKYIINVSFQTRVNKTTRTLEIAESFGLGLDEKEWTLYDNLELEVKQGDVVYITGQSGS GKSVVLRELQHQMKDEGLSVASIDDFTFDNEVNVIDQLGKTTSDALGLLSMAGLNDAYLF VRKPSEMSDGQKYRLKIAKLIESGAKVWAADEFGAVLDRVTAQVVASNLQRAARKVGATV MVATTHEDLKNALRPDMQITKHYKERVKVEYA >gi|299857028|gb|ADWS01000036.1| GENE 29 30098 - 30766 618 222 aa, chain - ## HITS:1 COG:YPMT1.28c KEGG:ns NR:ns ## COG: YPMT1.28c COG1475 # Protein_GI_number: 16082812 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 1 222 1 222 222 350 89.0 1e-96 MTKKFEIVYRDPADLIPYEMNAKKHDEQQIRDLAAAIKKRGFDQPITVDKNDVIITGHGR REAAIFAGLERVPVIVRDDLSDDEVRAKRLEDNRLASIDYDAIKLQKELESLVLDDIEVF GFEERELNVLVGSMTEEMDTDSLVIDLGEETKRQKDEHTEISREVAAEEVRVVDVLGFKT LPAGSAIVVGDLLAHMEEMTGESGVDAFVAYAEKISSGEMAA >gi|299857028|gb|ADWS01000036.1| GENE 30 30766 - 31308 468 180 aa, chain - ## HITS:1 COG:YPMT1.29c KEGG:ns NR:ns ## COG: YPMT1.29c COG1475 # Protein_GI_number: 16082813 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 1 180 53 232 232 287 85.0 8e-78 MARELEDGFFEILGGEHRWRAAIEQGISTVPVLSVGKISDVVAKQMSLVDNERYGEDDQI ALQRFIEEIQSELDYQLSEIAPYDDEISMVLAKEAAIDLEALEALSRGSDEPVDTDKREK TERVGAEHQTMRFKVTFDASDRVAETIKNIIKEQAINTGNEMENAGEALVWLVDYYKERM >gi|299857028|gb|ADWS01000036.1| GENE 31 31316 - 31447 98 43 aa, chain - ## HITS:1 COG:YPMT1.29c KEGG:ns NR:ns ## COG: YPMT1.29c COG1475 # Protein_GI_number: 16082813 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 1 43 7 49 232 87 95.0 8e-18 MDVKITILQVDVANLRPNTWNTNSVGAQNFEKLKGSIEKLGFF >gi|299857028|gb|ADWS01000036.1| GENE 32 31530 - 33089 792 519 aa, chain + ## HITS:1 COG:YPMT1.30 KEGG:ns NR:ns ## COG: YPMT1.30 COG1061 # Protein_GI_number: 16082814 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Yersinia pestis # 1 519 1 519 519 1001 93.0 0 MTVRIVSNAVNALISGADDKVKQLVQQMLSYEVETGDWKGTSTMFNWSKNSFPAGFAKPV AANLNKAGIKCVHIRKDKAPALGKPNPAVNPFPYNPDYAYQDQTVETLVREGMMIAQIAT GGGKSNVACKAAARIGRMTLFLTTRSVLMFQMAENFQRSIDYRAENGEPWLKGQKVGVIG SGEFQVSRHINVATVQTLASFLEEPPRDATPDKKSYHLKRRELVKRFLSSVSLLILEEAH ESSGSNFYDIARLCVNADYRLALTATPFMKDSTEANMRLMAVAGRIEIKVTEKYLIDRGI LAKPYFLYHKVAYKPDEARIKAELANKHLNFRVGMSTAYQKAYQLGIVYNLGRNEAIVRE ALLYKQHSLNCMTLVRLKRHGQILMEMMKESGLKVDFIYGESNQTTRQAKLNSLASGEID VLIGSTILDVGVDVPSVGAVILAGGGKAEVEMRQRVGRGLRAKKNQANVCFITDFIDISN KYLLSHSYERKHIIDTTPGFAEGVLPIDGAFDFGVLKRD >gi|299857028|gb|ADWS01000036.1| GENE 33 33092 - 33346 267 84 aa, chain + ## HITS:1 COG:no KEGG:YPDSF_4061 NR:ns ## KEGG: YPDSF_4061 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 84 1 84 92 74 54.0 1e-12 MSEKKTTYCQVALSDKANEKLGKFQIKLKEKKIKMSKAEVINAILETMTMAEFDKVTSAV GVSAKTREKIMRIYENSNMNKKKI >gi|299857028|gb|ADWS01000036.1| GENE 34 33438 - 34004 296 188 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293411878|ref|ZP_06654603.1| ## NR: gi|293411878|ref|ZP_06654603.1| predicted protein [Escherichia coli B354] # 1 188 12 199 199 330 98.0 4e-89 MSWLKELSFVDTTGAKKNHSFWKVSDPSDFLVGANAAFELLNFYQRYPEMKHSPLLYRIT NDMNRSGLLSSESVKGFFSKITPHISFDSANEIDYLPTKPQEQLSVPPEKKERRIASIEN ISKELRTTTLRLLNFLTLLNWIDDQTLIPSTDALDNRVLRLNKKSQFGFVFTKKGEDLIK RKYRLLND >gi|299857028|gb|ADWS01000036.1| GENE 35 34318 - 34638 238 106 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293411877|ref|ZP_06654602.1| ## NR: gi|293411877|ref|ZP_06654602.1| predicted protein [Escherichia coli B354] # 1 106 1 106 106 194 99.0 2e-48 MKKISSEEYFISHIYIYPFKLEPLNIILPTIKGVELEGYTLSSNFNDMGVQKPGTRSYYA YKVKCNNYNALNMLISKLETEIVEGNLNDDHEKLEQIEKLRKCDVK >gi|299857028|gb|ADWS01000036.1| GENE 36 34654 - 35253 205 199 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293411876|ref|ZP_06654601.1| ## NR: gi|293411876|ref|ZP_06654601.1| predicted protein [Escherichia coli B354] # 35 199 1 165 165 301 90.0 1e-80 MKMKLSLLLACICLPAFSANALSDFVSDMQKTYSMFTSEDVVEYKSRGLNQPVWFRFSDN AEETILNGGKERLRLQINGTAVPENVNVSSDEAMKPSGIVLEVQDGTLYCDEMATTGCQV NIRVGNEEPIVTYAKAEGNTSGKVLFIDENISKRIVRDIQKTANSKSVDKKIYVEVPFFV VGNKEFKFGLLKTPLRVSE >gi|299857028|gb|ADWS01000036.1| GENE 37 35250 - 35774 76 174 aa, chain + ## HITS:1 COG:no KEGG:HCM2.0081 NR:ns ## KEGG: HCM2.0081 # Name: not_defined # Def: putative transcriptional regulator # Organism: S.typhi # Pathway: not_defined # 5 174 6 175 175 290 78.0 2e-77 MRTLDITYGIPAEVWPRDYEHAENILMFWRKNNIPVRVTLEDGQVFCMYVQGTMPSRNKL DLCPLPYDKENRIRLPLERISTIESGVIDGIAREFKGRLTIHPDYVDNQPSRRDFFAICR KAYQNDQSIRVYMTDGREIEGVSRGVDACQVTLKLEDGRKILVFFDWVERILPF >gi|299857028|gb|ADWS01000036.1| GENE 38 36070 - 36720 586 216 aa, chain + ## HITS:1 COG:no KEGG:HCM2.0083 NR:ns ## KEGG: HCM2.0083 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 216 1 216 216 333 86.0 4e-90 MANIIISKKSIIEAAAIVSDELREKADLATQTYNEHYKNGTHTKADKANMQAATTKLAYF INNVVNAVEDEKLCSVFYYAIKASKQAPEVFFRDAMTNSYSLEKLVYLVKSIKAGKCVYS VADMSGSRVFALIDMINDEIETFTNGAVFDLMNEAKKANEIKLDAGYTQANQLINLCERL GLVEKVKGMGSAKAGTQQYRFIKNDFYNYLADAFKA >gi|299857028|gb|ADWS01000036.1| GENE 39 36768 - 36998 217 76 aa, chain + ## HITS:1 COG:no KEGG:YPDSF_4151 NR:ns ## KEGG: YPDSF_4151 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 76 1 75 75 69 50.0 4e-11 MFILIAGVNVRNEYFVNRIAGIAGYAGRAVELIDETTRKIDLLSDQERKKADVNDADIFL MLKAFVEMGFEISLHK >gi|299857028|gb|ADWS01000036.1| GENE 40 37380 - 37532 99 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSQATKVIIIFLAHLSDNRWLDSTSFPMFFLRKGECSRFPKKSWPFPVGS >gi|299857028|gb|ADWS01000036.1| GENE 41 37615 - 38097 255 160 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0085c NR:ns ## KEGG: HCM2.0085c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 159 1 159 160 237 71.0 8e-62 MNFIATVNAPAHGNIAVTFSDIEKRVLGAWRDNETVELSAQEKCIIARDIIGNRRYSRVF EKAYVVNSGFGTFVFPVRSGRFCQSKLIEFATQISVWIKTQSSFKFSDDEAVSQGMRIAN NAIKCKNITYTAGVDTWKLFCANFMLNVYASNRIHILDGV >gi|299857028|gb|ADWS01000036.1| GENE 42 38448 - 38822 309 124 aa, chain - ## HITS:1 COG:no KEGG:SG0273 NR:ns ## KEGG: SG0273 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Gallinarum # Pathway: not_defined # 1 124 48 174 174 127 47.0 9e-29 MGLDIYIETQPKNDLNNEASRKQVAYFRKFNALVGWMERNVGEVENCELLELTMNDICLL KAHLMHINESNCEEYLPTREGFFFGSQEYDEGYWHDVGELKELVEDLIKNHDFHNNRLTF CAWW >gi|299857028|gb|ADWS01000036.1| GENE 43 38940 - 39380 470 146 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0087c NR:ns ## KEGG: HCM2.0087c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 16 146 1 130 130 129 51.0 4e-29 MIIEYQNNQYTMEGEMTVKREKLTVDVYYASETAEGKNVAKITVVTYNTETGAEVQASTI VRKGDASGGEYATQYQSILDATDPLLLKIENYFRQVDEEVFETMMSMVNSVFASSLNTST TWIGQYGLRITSGIPADTLIPESVFA >gi|299857028|gb|ADWS01000036.1| GENE 44 39461 - 39772 240 103 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0088c NR:ns ## KEGG: HCM2.0088c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 103 1 103 103 123 64.0 2e-27 MKKSLVLGLDKDQKRKEKPALVAQLTLLDIVANGTSIRLFRETAVSFDKNTFTRYVMNVR RQRGKGWVAFQRMWPEHQLELALMEVNRVAQQEIQRASVMAIA >gi|299857028|gb|ADWS01000036.1| GENE 45 39927 - 40256 300 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293411867|ref|ZP_06654592.1| ## NR: gi|293411867|ref|ZP_06654592.1| predicted protein [Escherichia coli B354] # 37 109 1 73 73 130 94.0 2e-29 MFANIDINQIKKLTQKEFDQFYELEGWSSTLINSRWVLELMTRDDAPALMISDLGDDADF MDMSEFCVDTYNRSQKYYFTCDSENDVISKVYLHLVQHWDVQEFLEVFA >gi|299857028|gb|ADWS01000036.1| GENE 46 41810 - 42415 332 201 aa, chain - ## HITS:1 COG:no KEGG:azo2628 NR:ns ## KEGG: azo2628 # Name: not_defined # Def: hypothetical protein # Organism: Azoarcus_BH72 # Pathway: not_defined # 59 196 14 148 149 91 39.0 2e-17 MLIIYTSNLSDEMDVMETNNQQKKPLNNTYAWILAFIPICFGIPNEEYANYAVLIGSLAA IGLLVADRMAISESGYEPPAILWGIVFMPIYLWKRATITKSSRLPFIIVVTLLAYVFFIV IPKQEDGVIEEAACPVVTTILKEHNGSTAAKCIKVNIDEKVTDKFYRATATLDNGNDINI TLELTGNSKFYVRVPNVYLNN >gi|299857028|gb|ADWS01000036.1| GENE 47 42492 - 42677 190 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293411865|ref|ZP_06654590.1| ## NR: gi|293411865|ref|ZP_06654590.1| predicted protein [Escherichia coli B354] # 1 61 1 61 61 103 96.0 5e-21 MLKEDSYLLKSLEMRGVEPTVKNAHDIYLQFSPELKQLINKYGVNDSSVKAMIDDELDHL I >gi|299857028|gb|ADWS01000036.1| GENE 48 42714 - 43013 193 99 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0094c NR:ns ## KEGG: HCM2.0094c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 99 1 105 105 99 45.0 4e-20 MLNITQAYQVALISSSHTSEEDARRFMIASNELDWVSQIEYGCIVHAGLQDDDWKDELRR YGISEGAIANIQKVLDVGFDSVHFDCAAPVVEGLECWQW >gi|299857028|gb|ADWS01000036.1| GENE 49 43175 - 45133 2256 652 aa, chain - ## HITS:1 COG:ZmetG_1 KEGG:ns NR:ns ## COG: ZmetG_1 COG0143 # Protein_GI_number: 15802593 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Escherichia coli O157:H7 EDL933 # 1 542 26 567 567 1145 98.0 0 MLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDF AGFNISYDNYHSTHSEENRQLSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGT CPKCKAPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAW TRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSF KNLCDKRGDTTSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHG YVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNAD IVNKVVNLASRNAGFINKRFDGVLAGELADPQLYKTFTDAAEVIGEAWESREFGKAIREI MALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEA FLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQVEALVEASKEEVKATAAPVTGPLADD PIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQA LIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK Prediction of potential genes in microbial genomes Time: Sun May 15 22:43:28 2011 Seq name: gi|299857027|gb|ADWS01000037.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont36.1, whole genome shotgun sequence Length of sequence - 45000 bp Number of predicted genes - 43, with homology - 43 Number of transcription units - 15, operones - 7 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . + CDS 1242 - 1811 146 ## JW0693 hypothetical protein + Prom 1958 - 2017 7.9 3 2 Tu 1 2/0.600 + CDS 2037 - 2291 222 ## COG5433 Transposase + Prom 2338 - 2397 8.8 4 3 Tu 1 2/0.600 + CDS 2510 - 3178 241 ## COG5433 Transposase + Term 3218 - 3252 -0.9 + Prom 3245 - 3304 4.0 5 4 Op 1 5/0.000 + CDS 3326 - 3835 348 ## COG3272 Uncharacterized conserved protein 6 4 Op 2 . + CDS 3832 - 5250 779 ## COG0415 Deoxyribodipyrimidine photolyase - Term 5232 - 5276 10.8 7 5 Tu 1 . - CDS 5292 - 6773 1791 ## COG3104 Dipeptide/tripeptide permease - Prom 6886 - 6945 3.0 + Prom 6867 - 6926 3.0 8 6 Op 1 4/0.400 + CDS 7044 - 7787 770 ## COG0327 Uncharacterized conserved protein 9 6 Op 2 21/0.000 + CDS 7810 - 8466 621 ## COG2049 Allophanate hydrolase subunit 1 10 6 Op 3 8/0.000 + CDS 8460 - 9392 910 ## COG1984 Allophanate hydrolase subunit 2 11 6 Op 4 3/0.600 + CDS 9382 - 10116 624 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 12 6 Op 5 . + CDS 10152 - 10943 645 ## COG0266 Formamidopyrimidine-DNA glycosylase - Term 10707 - 10752 1.7 13 7 Tu 1 . - CDS 10940 - 11986 914 ## COG3180 Putative ammonia monooxygenase - Prom 12045 - 12104 5.2 - Term 12090 - 12129 5.2 14 8 Op 1 . - CDS 12138 - 13199 803 ## SSON_0667 hypothetical protein 15 8 Op 2 10/0.000 - CDS 13196 - 13927 592 ## COG3121 P pilus assembly protein, chaperone PapD 16 8 Op 3 6/0.000 - CDS 13942 - 16401 1467 ## COG3188 P pilus assembly protein, porin PapC - Term 16412 - 16441 3.5 17 8 Op 4 3/0.600 - CDS 16452 - 17018 556 ## COG3539 P pilus assembly protein, pilin FimA - Term 17343 - 17382 8.4 18 9 Tu 1 . - CDS 17409 - 18692 1453 ## COG0372 Citrate synthase - Prom 18725 - 18784 2.8 + Prom 18402 - 18461 2.9 19 10 Tu 1 . + CDS 18680 - 18865 73 ## ECSE_0779 hypothetical protein 20 11 Tu 1 . - CDS 18898 - 19005 67 ## EC55989_0704 hypothetical protein - Prom 19121 - 19180 4.7 + Prom 19120 - 19179 5.5 21 12 Op 1 24/0.000 + CDS 19386 - 19790 293 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 22 12 Op 2 22/0.000 + CDS 19784 - 20131 500 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 23 12 Op 3 36/0.000 + CDS 20131 - 21897 2150 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 24 12 Op 4 5/0.000 + CDS 21913 - 22629 651 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit + Term 22637 - 22682 -0.9 25 12 Op 5 21/0.000 + CDS 22830 - 25631 2851 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes 26 12 Op 6 6/0.000 + CDS 25646 - 26863 1648 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 27 12 Op 7 39/0.000 + CDS 26957 - 28123 1433 ## COG0045 Succinyl-CoA synthetase, beta subunit 28 12 Op 8 . + CDS 28123 - 28992 1012 ## COG0074 Succinyl-CoA synthetase, alpha subunit + Term 29068 - 29097 2.1 - Term 28985 - 29034 1.2 29 13 Tu 1 . - CDS 29096 - 29818 668 ## COG2188 Transcriptional regulators - Prom 29869 - 29928 6.8 + Prom 29884 - 29943 4.5 30 14 Op 1 2/0.600 + CDS 29987 - 31903 1888 ## COG1299 Phosphotransferase system, fructose-specific IIC component 31 14 Op 2 . + CDS 31921 - 34554 1757 ## COG0383 Alpha-mannosidase 32 14 Op 3 . + CDS 34579 - 34806 71 ## SSON_0684 hypothetical protein + Prom 35213 - 35272 7.7 33 15 Op 1 31/0.000 + CDS 35400 - 36968 1702 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 34 15 Op 2 3/0.600 + CDS 36984 - 38123 1381 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 35 15 Op 3 2/0.600 + CDS 38138 - 38251 144 ## COG4890 Predicted outer membrane lipoprotein 36 15 Op 4 7/0.000 + CDS 38251 - 38544 199 ## COG3790 Predicted membrane protein + Term 38566 - 38601 4.3 + Prom 38594 - 38653 3.2 37 15 Op 5 13/0.000 + CDS 38808 - 39098 202 ## COG0824 Predicted thioesterase 38 15 Op 6 30/0.000 + CDS 39104 - 39787 729 ## COG0811 Biopolymer transport proteins 39 15 Op 7 8/0.000 + CDS 39791 - 40219 463 ## COG0848 Biopolymer transport protein 40 15 Op 8 8/0.000 + CDS 40284 - 41549 1210 ## COG3064 Membrane protein involved in colicin uptake + Prom 41571 - 41630 4.0 41 15 Op 9 20/0.000 + CDS 41682 - 42974 1254 ## COG0823 Periplasmic component of the Tol biopolymer transport system 42 15 Op 10 13/0.000 + CDS 43009 - 43530 695 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 43 15 Op 11 . + CDS 43540 - 44331 598 ## COG1729 Uncharacterized protein conserved in bacteria + TRNA 44496 - 44571 99.5 # Lys TTT 0 0 + TRNA 44707 - 44782 94.3 # Val TAC 0 0 + TRNA 44785 - 44860 99.5 # Lys TTT 0 0 Predicted protein(s) >gi|299857027|gb|ADWS01000037.1| GENE 1 91 - 1245 645 384 aa, chain + ## HITS:1 COG:ECs0729 KEGG:ns NR:ns ## COG: ECs0729 COG3209 # Protein_GI_number: 15829983 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 384 1016 1399 1399 766 97.0 0 MSLSRKPQVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRVETATGEQAKTQRRSLA DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN NGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRK WVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPA TAGIDDLGEILAKMKQRTSRGIRK >gi|299857027|gb|ADWS01000037.1| GENE 2 1242 - 1811 146 189 aa, chain + ## HITS:1 COG:no KEGG:JW0693 NR:ns ## KEGG: JW0693 # Name: ybfC # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 189 1 189 189 394 100.0 1e-109 MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDI GEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRF RSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYARMTAHLPNKNESYECLIKIQ HELIRSEEK >gi|299857027|gb|ADWS01000037.1| GENE 3 2037 - 2291 222 84 aa, chain + ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 79 1 79 378 160 96.0 6e-40 MELKKLMEHISITPDYRQAWKVVHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQ YGDFENGIPVHDTIARVVSQGKIT >gi|299857027|gb|ADWS01000037.1| GENE 4 2510 - 3178 241 222 aa, chain + ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 222 32 253 378 441 95.0 1e-124 MTIFAVISGAESWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFI NWMRDCHSSNDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDKKSNE ITAIPELLNMLDIKGNIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFP LKELNNPKHDSYAISEKSHGREETRLHIVCDVPDELIDFTFE >gi|299857027|gb|ADWS01000037.1| GENE 5 3326 - 3835 348 169 aa, chain + ## HITS:1 COG:ybgA KEGG:ns NR:ns ## COG: ybgA COG3272 # Protein_GI_number: 16128682 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 169 1 169 169 310 97.0 7e-85 MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVA DIHQWQNLDDFYNQYYQRVIVLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALID SYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRVINLRHSGVL >gi|299857027|gb|ADWS01000037.1| GENE 6 3832 - 5250 779 472 aa, chain + ## HITS:1 COG:phrB KEGG:ns NR:ns ## COG: phrB COG0415 # Protein_GI_number: 16128683 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Escherichia coli K12 # 1 471 1 471 472 946 97.0 0 MTTHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLN GLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERA LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGS IEPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSA SLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSELIWREFYRHLMTYYPSLCKHCPFIA WTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMISASFLVKDLLIDW REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDREGEFIRRWL PELRDVPGKAVHEPWKWAQKAGVMLDYPQPIVDHKEARLRTLAAYEEARKGA >gi|299857027|gb|ADWS01000037.1| GENE 7 5292 - 6773 1791 493 aa, chain - ## HITS:1 COG:ybgH KEGG:ns NR:ns ## COG: ybgH COG3104 # Protein_GI_number: 16128684 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 493 1 493 493 919 99.0 0 MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYNDTHAYELFSAYCSLVYV TPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSN VSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIA GLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYAL IVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVN RDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFC ILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYML LSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALACVGLVQMIWLYQ ALKFRNRALALES >gi|299857027|gb|ADWS01000037.1| GENE 8 7044 - 7787 770 247 aa, chain + ## HITS:1 COG:ECs0735 KEGG:ns NR:ns ## COG: ECs0735 COG0327 # Protein_GI_number: 15829989 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 499 100.0 1e-141 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAV IVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITV MGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFID SAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTF IDIPNPA >gi|299857027|gb|ADWS01000037.1| GENE 9 7810 - 8466 621 218 aa, chain + ## HITS:1 COG:ECs0736 KEGG:ns NR:ns ## COG: ECs0736 COG2049 # Protein_GI_number: 15829990 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Escherichia coli O157:H7 # 1 218 1 218 218 417 100.0 1e-117 MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILRNP ESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDLAVVAAHCGLSEKQVVELH SSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPAGSVGIGGPQTGVYPLATPGG WQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC >gi|299857027|gb|ADWS01000037.1| GENE 10 8460 - 9392 910 310 aa, chain + ## HITS:1 COG:ECs0737 KEGG:ns NR:ns ## COG: ECs0737 COG1984 # Protein_GI_number: 15829991 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 631 99.0 0 MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLVGNDANAPALEITLGQL TVEFETDGGFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTLKRPQHGMRSYLAVAGGID VPPVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKAKRDFMEAQGVKQLLWGNRIRALPGP EYHEFDRASQDAFWRSPWQLSSQSNRMGYRLQGQILKRTTDRELLSHGLLPGVVQVPHNG QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALKARQDQQRYFE QLAWRLHNEN >gi|299857027|gb|ADWS01000037.1| GENE 11 9382 - 10116 624 244 aa, chain + ## HITS:1 COG:ybgL KEGG:ns NR:ns ## COG: ybgL COG1540 # Protein_GI_number: 16128688 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Escherichia coli K12 # 1 244 1 244 244 436 97.0 1e-122 MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACVREAIKNGVAIGAHPSF PDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRHVKPHGMLYNQAAKEAQLA DAIARAVYACDPALILVGLAGSELIRAGKQYGLTTREEVFADRGYQADGSLVPRSQPGAL IENEQQALAQTLEMVQHGRVKSITGEWATVAAQTVCLHGDGEHALAFARRLRATFAKKGI VVAA >gi|299857027|gb|ADWS01000037.1| GENE 12 10152 - 10943 645 263 aa, chain + ## HITS:1 COG:nei KEGG:ns NR:ns ## COG: nei COG0266 # Protein_GI_number: 16128689 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Escherichia coli K12 # 1 263 1 263 263 539 98.0 1e-153 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQHVTHVETRGKALLTHFS NELTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTILLYSASDIEMLTPEQLTTH PFLQRVGPDVLDPNLTPEVVKERVLSPRFRNRQFAGLLLEQAFLAGLGNYLRVEILWQVG LTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGEPCER CGSIIEKTTLSSRPFYWCPGCQH >gi|299857027|gb|ADWS01000037.1| GENE 13 10940 - 11986 914 348 aa, chain - ## HITS:1 COG:abrB KEGG:ns NR:ns ## COG: abrB COG3180 # Protein_GI_number: 16128690 # Func_class: R General function prediction only # Function: Putative ammonia monooxygenase # Organism: Escherichia coli K12 # 1 348 16 363 363 526 98.0 1e-149 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI LGCMIAQNLTGSILTTLAANWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQQIVWFPPVS INLLLTILLAVVAGTAGCMLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA >gi|299857027|gb|ADWS01000037.1| GENE 14 12138 - 13199 803 353 aa, chain - ## HITS:1 COG:no KEGG:SSON_0667 NR:ns ## KEGG: SSON_0667 # Name: ybgO # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 353 11 363 363 726 100.0 0 MSAGKGVLLVICLLFLPLKSALALNCYFGSSGGSVEKSEAIQPFAVPGNAKLGDKIWESD DIKIPVYCDNNTNGNFESEHVYAWVNPYPGVQDRYYQLGVTYNGVDYDANQGKSRIDTNQ CIDSKNIDIYTPEQIIAMGWQNKICSGDPANIHMSRTFLARMRLYVKIREMPPHDYQSTL SDYIVVQFDGAGSVNEDPTAQNLKYHITGLENIRVLDCSVNFSISPETQVIDFGKFNLLD IRRHTMSKTFSIKTTKSQNDQCTDGFKVSSSFYTEETLVEEDKALLIGNGLKLRLLDENA SPYTFNKYAEYADFTSDMLVYEKTYTAELSSIAGTPIEAGPFDTVVLFKINYN >gi|299857027|gb|ADWS01000037.1| GENE 15 13196 - 13927 592 243 aa, chain - ## HITS:1 COG:ybgP KEGG:ns NR:ns ## COG: ybgP COG3121 # Protein_GI_number: 16128692 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 242 1 242 242 446 90.0 1e-125 MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENE KGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNS DHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGR NEKGVLPGFKTVMVAPFSTVNTNTGNYSGSQFYLGYMDDYGALRMTTLNCSGQCHLQAVE AKK >gi|299857027|gb|ADWS01000037.1| GENE 16 13942 - 16401 1467 819 aa, chain - ## HITS:1 COG:ybgQ KEGG:ns NR:ns ## COG: ybgQ COG3188 # Protein_GI_number: 16128693 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 819 1 818 818 1511 95.0 0 MDTVNIYRLSLVSCLVVAMPCALAVEFNLNVLDKSMRDRIDISLLKEKGVIAPGEYFVSV AVNNNQISNGQKINWHKNDDKTIPCINDLLVDKFGLKPEVRQSLPLINQCVDFSSRPEML FNFDQANQQLNITIPQAWLAWHSENWTPPSTWKEGVAGVLMDYNLFASSYRPQDGSSSTN LNAYGTAGINTGAWRLRSDYQLNQTDSDDNHEQSGEISRTYLFRPLPQLGSKLTLGETDF SSNIFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTISQSGRVIYQKKVPPG PFIIDDLNQSVQGTLDVKVTEEDGRVNNFQVSAASTPFLTRQGQVRYKLAAGQPRPSMSH QTENETFFSNEVSWGMLSNTSLYGGLLLSGDDYHSAAIGIGQNMLWLGALSFDVTWASSH FDTQQDERGLSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYLDHKYNDSDAQDEKQ TISLSVGQPITPLNLNLYANLLHQTWWNADASTTANITAGFNVDIGDWRDISISTSFNTT HYEDKDRDNQIYLSISLPFGNGGRVGYDMQNSSHSTTHRMSWNDTLDERNSWGMSAGLQS DRPDNGAQVSGNYQHLSSAGEWDISGTYAANDYSSVSSSWSGSFTATQYGAAFHRRSSTN EPRLMVSTDGVADIPVQGNLDYTNHFGIAVVPLISSYQPSTVAVNMNDLPDGVTVAENVI KETWIEGAIGYKSLASRSGKDVNVIIRNASGQFPPLGADIRQDDSGISVGMVGEEGHAWL SGVAENQNFTVVWGDSQHCSLHLPEHMEDTANRLILPCH >gi|299857027|gb|ADWS01000037.1| GENE 17 16452 - 17018 556 188 aa, chain - ## HITS:1 COG:ybgD KEGG:ns NR:ns ## COG: ybgD COG3539 # Protein_GI_number: 16128694 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 188 1 188 188 283 79.0 1e-76 MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEIHQDDIDKEVELGQVTT SHINQSHHSDAVAVDLRLVNCDLENSSNGSGGKISKVAVTFDSSAKTTGADPILNNTSTG EATGVGVRLMNKDQSNIVLGTATPDIDLAPTSSEQTLNFFAWMEQIDQATPVTPGAVTAN ATYVLDYK >gi|299857027|gb|ADWS01000037.1| GENE 18 17409 - 18692 1453 427 aa, chain - ## HITS:1 COG:gltA KEGG:ns NR:ns ## COG: gltA COG0372 # Protein_GI_number: 16128695 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Escherichia coli K12 # 1 427 1 427 427 901 100.0 0 MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFI DGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITR LFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYS IGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVR TAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFR LMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYP NVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYEKRD FKSDIKR >gi|299857027|gb|ADWS01000037.1| GENE 19 18680 - 18865 73 61 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0779 NR:ns ## KEGG: ECSE_0779 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 61 3 63 63 120 98.0 1e-26 MYQPFKVSLAPYYVRLPELKFAFAHQPGFTRLLFGSPLCERGENLGTELWALAGKGSIDD E >gi|299857027|gb|ADWS01000037.1| GENE 20 18898 - 19005 67 35 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0704 NR:ns ## KEGG: EC55989_0704 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 35 18 52 52 65 100.0 5e-10 MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV >gi|299857027|gb|ADWS01000037.1| GENE 21 19386 - 19790 293 134 aa, chain + ## HITS:1 COG:ECs0746 KEGG:ns NR:ns ## COG: ECs0746 COG2009 # Protein_GI_number: 15830000 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Escherichia coli O157:H7 # 6 134 1 129 129 220 100.0 4e-58 MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSP EGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFV ITVVLSLLAGVLVW >gi|299857027|gb|ADWS01000037.1| GENE 22 19784 - 20131 500 115 aa, chain + ## HITS:1 COG:ECs0747 KEGG:ns NR:ns ## COG: ECs0747 COG2142 # Protein_GI_number: 15830001 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Escherichia coli O157:H7 # 1 115 1 115 115 148 99.0 3e-36 MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVF TLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV >gi|299857027|gb|ADWS01000037.1| GENE 23 20131 - 21897 2150 588 aa, chain + ## HITS:1 COG:ECs0748 KEGG:ns NR:ns ## COG: ECs0748 COG1053 # Protein_GI_number: 15830002 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1153 100.0 0 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI PTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQ ESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAM AKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAH SRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY >gi|299857027|gb|ADWS01000037.1| GENE 24 21913 - 22629 651 238 aa, chain + ## HITS:1 COG:ECs0749 KEGG:ns NR:ns ## COG: ECs0749 COG0479 # Protein_GI_number: 15830003 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 495 100.0 1e-140 MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVC GSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPY LLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYR FLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA >gi|299857027|gb|ADWS01000037.1| GENE 25 22830 - 25631 2851 933 aa, chain + ## HITS:1 COG:ECs0751 KEGG:ns NR:ns ## COG: ECs0751 COG0567 # Protein_GI_number: 15830005 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Escherichia coli O157:H7 # 1 933 1 933 933 1944 100.0 0 MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHS QTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKV ADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEE KRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLK EMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMG FSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAV TGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIF HVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKH PTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHE WDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLA YATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLS EEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPH GYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKS LLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDV AIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLR YAGRPASASPAVGYMSVHQKQQQDLVNDALNVE >gi|299857027|gb|ADWS01000037.1| GENE 26 25646 - 26863 1648 405 aa, chain + ## HITS:1 COG:STM0737 KEGG:ns NR:ns ## COG: STM0737 COG0508 # Protein_GI_number: 16764107 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Salmonella typhimurium LT2 # 1 405 1 402 402 717 96.0 0 MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAV LEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRR LLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVP MTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVK AVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIK ELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNG QVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV >gi|299857027|gb|ADWS01000037.1| GENE 27 26957 - 28123 1433 388 aa, chain + ## HITS:1 COG:ECs0753 KEGG:ns NR:ns ## COG: ECs0753 COG0045 # Protein_GI_number: 15830007 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 728 100.0 0 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGV KVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRR VVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKI FMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDP REAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTE AFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKK LADSGLNIIAAKGLTDAAQQVVAAVEGK >gi|299857027|gb|ADWS01000037.1| GENE 28 28123 - 28992 1012 289 aa, chain + ## HITS:1 COG:ECs0754 KEGG:ns NR:ns ## COG: ECs0754 COG0074 # Protein_GI_number: 15830008 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 508 100.0 1e-144 MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREA VAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI GPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGG DPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAP KGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK >gi|299857027|gb|ADWS01000037.1| GENE 29 29096 - 29818 668 240 aa, chain - ## HITS:1 COG:farR KEGG:ns NR:ns ## COG: farR COG2188 # Protein_GI_number: 16128705 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 240 1 240 240 440 99.0 1e-123 MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILE SIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIFEVIPADDFLQQQLQITAQ DRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEI IPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEYSRNAFNTDDYKFTLIAQRKSSR >gi|299857027|gb|ADWS01000037.1| GENE 30 29987 - 31903 1888 638 aa, chain + ## HITS:1 COG:hrsA_3 KEGG:ns NR:ns ## COG: hrsA_3 COG1299 # Protein_GI_number: 16128706 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 279 638 1 360 360 639 99.0 0 MNLTTLTHRDALCLNARFTSREEAIHALTQRLAALGKISSTEQFLEEVYRRESLGPTALG EGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMQLLT ALTTRLADDEIRARIQSATTPDELLSALDDKGGTQPSASFSNAPTIVCVTACPAGIAHTY MAAEYLEKAGRKLGVNVYVEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIP ALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPL IVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLAD KPALAPGFAAGLAANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVL GTLGAGSLMLFVVGEPVAWINNSLTAWLNGLSGSNALLLGAILGFMCSFDLGGPVNKAAY AFCLGAMANGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGIT EGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAA IGWFGAALVGAAISTAILLIWRRHAVKHGNYLTDGVMP >gi|299857027|gb|ADWS01000037.1| GENE 31 31921 - 34554 1757 877 aa, chain + ## HITS:1 COG:ybgG KEGG:ns NR:ns ## COG: ybgG COG0383 # Protein_GI_number: 16128707 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Escherichia coli K12 # 1 877 1 877 877 1790 97.0 0 MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILE DYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMK IGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVLPL GYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMDKLREI YPQRKFVMSRFEEVFEKIEAQRESLATLKGEFIDGKYMRVHRTIGSTRMDIKIAHARIEN KIVNLLEPLATLAWTLGFEYHHGFLEKMWKEILKNHAHDSIGCCCSDKVHREIVARFELA EDMADNLLRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRASQFNLRDDRGQ PVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQINQIVPSMGYRTLYIEANQPGNVI AAKSDAEGILENAFWQIALNEDGTLQLVDKDSGVRYDRVLQIEESSDDGDEYDYSPAKEE WVMTSATAKPQCEITHEAWQSRAVIRYDMAVPLNLLERSVRQSTGRVGVEMVVTLSHNSR RIDVDINLDNQADDHRLRVLIPTSFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAP VPVWNMLNYAALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLFLRSG RPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKL NKAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVIS CSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA >gi|299857027|gb|ADWS01000037.1| GENE 32 34579 - 34806 71 75 aa, chain + ## HITS:1 COG:no KEGG:SSON_0684 NR:ns ## KEGG: SSON_0684 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 75 1 75 75 144 100.0 7e-34 MRGQIVDKGRFVHAGYGMNALFGLQKQANSIYCRDDVDTGKRSASGNFAFIFTLKPRICG FIFNKIITLGELIII >gi|299857027|gb|ADWS01000037.1| GENE 33 35400 - 36968 1702 522 aa, chain + ## HITS:1 COG:ECs0768 KEGG:ns NR:ns ## COG: ECs0768 COG1271 # Protein_GI_number: 15830022 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Escherichia coli O157:H7 # 1 522 2 523 523 1011 100.0 0 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR >gi|299857027|gb|ADWS01000037.1| GENE 34 36984 - 38123 1381 379 aa, chain + ## HITS:1 COG:ECs0769 KEGG:ns NR:ns ## COG: ECs0769 COG1294 # Protein_GI_number: 15830023 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Escherichia coli O157:H7 # 1 379 1 379 379 699 100.0 0 MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGN QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWD WGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMI ITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAA SNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLA CIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYW KMFGRITKEDIERNTHSLY >gi|299857027|gb|ADWS01000037.1| GENE 35 38138 - 38251 144 37 aa, chain + ## HITS:1 COG:STM0742 KEGG:ns NR:ns ## COG: STM0742 COG4890 # Protein_GI_number: 16764112 # Func_class: S Function unknown # Function: Predicted outer membrane lipoprotein # Organism: Salmonella typhimurium LT2 # 1 36 1 36 37 57 86.0 5e-09 MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI >gi|299857027|gb|ADWS01000037.1| GENE 36 38251 - 38544 199 97 aa, chain + ## HITS:1 COG:ECs0770 KEGG:ns NR:ns ## COG: ECs0770 COG3790 # Protein_GI_number: 15830024 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 169 100.0 1e-42 MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCA GVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF >gi|299857027|gb|ADWS01000037.1| GENE 37 38808 - 39098 202 96 aa, chain + ## HITS:1 COG:ECs0771 KEGG:ns NR:ns ## COG: ECs0771 COG0824 # Protein_GI_number: 15830025 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Escherichia coli O157:H7 # 1 96 39 134 134 177 100.0 3e-45 MLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVN AENTLLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ >gi|299857027|gb|ADWS01000037.1| GENE 38 39104 - 39787 729 227 aa, chain + ## HITS:1 COG:ECs0772 KEGG:ns NR:ns ## COG: ECs0772 COG0811 # Protein_GI_number: 15830026 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Escherichia coli O157:H7 # 1 227 4 230 230 412 100.0 1e-115 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELS RLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENL ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTVSESNKG >gi|299857027|gb|ADWS01000037.1| GENE 39 39791 - 40219 463 142 aa, chain + ## HITS:1 COG:ECs0773 KEGG:ns NR:ns ## COG: ECs0773 COG0848 # Protein_GI_number: 15830027 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Escherichia coli O157:H7 # 11 142 11 142 142 207 100.0 4e-54 MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSND NPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEI IKALNLLHSAGVKSVGLMTQPI >gi|299857027|gb|ADWS01000037.1| GENE 40 40284 - 41549 1210 421 aa, chain + ## HITS:1 COG:tolA KEGG:ns NR:ns ## COG: tolA COG3064 # Protein_GI_number: 16128714 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane protein involved in colicin uptake # Organism: Escherichia coli K12 # 1 421 1 421 421 286 100.0 4e-77 MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAV VEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQA EEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAAKKAAADAKKKAEAEAAKAAA EAQKKAEAAAAALKKKAEAAEAAAAEARKKAATEAAEKAKAEAEKKAAAEKAAADKKAAA EKAAADKKAAEKAAAEKAAADKKAAAEKAAADKKAAAAKAAAEKAAAAKAAAEADDIFGE LSSGKNAPKTGGGAKGNNASPAGSGNTKNNGASGADINNYAGQIKSAIESKFYDASSYAG KTCTLRIKLAPDGMLLDIKPEGGDPALCQAALAAAKLAKIPKPPSQAVYEVFKNAPLDFK P >gi|299857027|gb|ADWS01000037.1| GENE 41 41682 - 42974 1254 430 aa, chain + ## HITS:1 COG:ECs0775 KEGG:ns NR:ns ## COG: ECs0775 COG0823 # Protein_GI_number: 15830029 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Escherichia coli O157:H7 # 1 430 1 430 430 820 100.0 0 MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAA DLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVD TGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPY ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQ NLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAK QDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQ VKFPAWSPYL >gi|299857027|gb|ADWS01000037.1| GENE 42 43009 - 43530 695 173 aa, chain + ## HITS:1 COG:ECs0776 KEGG:ns NR:ns ## COG: ECs0776 COG2885 # Protein_GI_number: 15830030 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 296 100.0 2e-80 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARL QMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY >gi|299857027|gb|ADWS01000037.1| GENE 43 43540 - 44331 598 263 aa, chain + ## HITS:1 COG:ECs0777 KEGG:ns NR:ns ## COG: ECs0777 COG1729 # Protein_GI_number: 15830031 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 393 99.0 1e-109 MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQ QQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQSTSSDQSGAAA STTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLP NANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVY QQVISKYPGTDGAKQAQKRLNAM Prediction of potential genes in microbial genomes Time: Sun May 15 22:43:55 2011 Seq name: gi|299857026|gb|ADWS01000038.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont37.1, whole genome shotgun sequence Length of sequence - 44834 bp Number of predicted genes - 40, with homology - 40 Number of transcription units - 18, operones - 10 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 917 358 ## COG3209 Rhs family protein 2 1 Op 2 . + CDS 929 - 1390 111 ## EC55989_4059 hypothetical protein + Prom 1918 - 1977 5.6 3 2 Tu 1 . + CDS 2097 - 2534 87 ## ECSE_3874 hypothetical protein - Term 2926 - 2960 -0.8 4 3 Op 1 . - CDS 2994 - 4130 968 ## COG1566 Multidrug resistance efflux pump 5 3 Op 2 . - CDS 4133 - 4495 310 ## EcSMS35_3931 hypothetical protein - Prom 4736 - 4795 5.2 6 4 Op 1 11/0.000 + CDS 5032 - 6945 2453 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component + Term 6952 - 6992 6.2 + Prom 6981 - 7040 2.6 7 4 Op 2 7/0.000 + CDS 7175 - 8323 1508 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 8 4 Op 3 . + CDS 8323 - 8910 383 ## COG3722 Transcriptional regulator 9 5 Tu 1 . - CDS 8922 - 9131 208 ## JW3576 hypothetical protein + Prom 9206 - 9265 4.8 10 6 Tu 1 . + CDS 9416 - 9778 527 ## ECSP_4596 hypothetical protein + Prom 10075 - 10134 9.1 11 7 Op 1 . + CDS 10321 - 11004 228 ## ECO103_4578 hypothetical protein 12 7 Op 2 3/0.600 + CDS 11048 - 15898 3674 ## COG5295 Autotransporter adhesin + Term 15995 - 16032 7.1 13 8 Op 1 4/0.400 + CDS 16267 - 17922 1843 ## COG1620 L-lactate permease 14 8 Op 2 5/0.200 + CDS 17922 - 18698 744 ## COG2186 Transcriptional regulators 15 8 Op 3 4/0.400 + CDS 18695 - 19885 1435 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 16 9 Tu 1 . + CDS 20071 - 20544 341 ## COG0219 Predicted rRNA methylase (SpoU class) 17 10 Tu 1 6/0.200 - CDS 20597 - 21418 825 ## COG1045 Serine acetyltransferase - Term 21431 - 21472 6.7 18 11 Op 1 7/0.000 - CDS 21498 - 22517 1032 ## COG0240 Glycerol-3-phosphate dehydrogenase 19 11 Op 2 9/0.000 - CDS 22517 - 22984 500 ## COG1952 Preprotein translocase subunit SecB 20 11 Op 3 7/0.000 - CDS 23047 - 23298 319 ## COG0695 Glutaredoxin and related proteins - Prom 23370 - 23429 2.4 21 11 Op 4 . - CDS 23440 - 23871 418 ## COG0607 Rhodanese-related sulfurtransferase - Prom 23911 - 23970 5.1 + Prom 24026 - 24085 4.2 22 12 Op 1 4/0.400 + CDS 24116 - 25660 1717 ## COG0696 Phosphoglyceromutase 23 12 Op 2 3/0.600 + CDS 25694 - 26953 1264 ## COG4942 Membrane-bound metallopeptidase 24 12 Op 3 . + CDS 26957 - 27916 792 ## COG2861 Uncharacterized protein conserved in bacteria + Term 27918 - 27959 -0.5 25 13 Tu 1 5/0.200 - CDS 27903 - 28934 495 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 29107 - 29166 6.2 - Term 29136 - 29166 3.0 26 14 Op 1 9/0.000 - CDS 29176 - 30201 1105 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 27 14 Op 2 . - CDS 30211 - 31407 1602 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes - Prom 31433 - 31492 3.0 + Prom 31344 - 31403 3.7 28 15 Op 1 6/0.200 + CDS 31621 - 32553 1149 ## COG0451 Nucleoside-diphosphate-sugar epimerases 29 15 Op 2 11/0.000 + CDS 32563 - 33609 997 ## COG0859 ADP-heptose:LPS heptosyltransferase 30 15 Op 3 . + CDS 33613 - 34572 678 ## COG0859 ADP-heptose:LPS heptosyltransferase - Term 34563 - 34606 8.1 31 16 Tu 1 . - CDS 34620 - 34868 97 ## SDY_4054 lipid A-core:surface polymer ligase WaaL 32 17 Op 1 . - CDS 35908 - 36681 218 ## COG3306 Glycosyltransferase involved in LPS biosynthesis 33 17 Op 2 . - CDS 36713 - 37741 654 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 34 17 Op 3 . - CDS 37767 - 38459 517 ## EcE24377A_4128 lipopolysaccharide core biosynthesis protein 35 17 Op 4 5/0.200 - CDS 38469 - 39464 374 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 36 17 Op 5 . - CDS 39481 - 40497 369 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 37 17 Op 6 . - CDS 40513 - 41310 489 ## EcE24377A_4131 lipopolysaccharide core biosynthesis protein RfaP 38 17 Op 7 5/0.200 - CDS 41303 - 42427 848 ## COG0438 Glycosyltransferase 39 17 Op 8 . - CDS 42424 - 43446 515 ## COG0859 ADP-heptose:LPS heptosyltransferase + Prom 43629 - 43688 5.5 40 18 Tu 1 . + CDS 43895 - 44834 709 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase Predicted protein(s) >gi|299857026|gb|ADWS01000038.1| GENE 1 3 - 917 358 304 aa, chain + ## HITS:1 COG:ECs4470 KEGG:ns NR:ns ## COG: ECs4470 COG3209 # Protein_GI_number: 15833724 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 304 1106 1409 1409 623 97.0 1e-178 ILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATA WCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL KGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIES ATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFASQLAKELHTNVIGPDTLW TWWGRGTNGKLKMDTVLTAPTNLNSNKDLMAITTKDLGNWITYGPSGHPISNMQGTPEKP SDIR >gi|299857026|gb|ADWS01000038.1| GENE 2 929 - 1390 111 153 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4059 NR:ns ## KEGG: EC55989_4059 # Name: yibG # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 153 1 153 153 280 100.0 8e-75 MKACLLLFFYFSLIGQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEAS FRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWM EFAVNNGNIDTKSKLQELKKLKRMDRRKNKENP >gi|299857026|gb|ADWS01000038.1| GENE 3 2097 - 2534 87 145 aa, chain + ## HITS:1 COG:no KEGG:ECSE_3874 NR:ns ## KEGG: ECSE_3874 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 145 1 145 145 226 100.0 1e-58 MADKAILWALISASNKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYK IDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKIIDINSVNICS DDKNIKLRVNSTIMAIDDSIKCIDE >gi|299857026|gb|ADWS01000038.1| GENE 4 2994 - 4130 968 378 aa, chain - ## HITS:1 COG:ECs4473 KEGG:ns NR:ns ## COG: ECs4473 COG1566 # Protein_GI_number: 15833727 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 723 100.0 0 MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQKA VIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTL RAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKG SVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTY AAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPV VPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVSVM RKVLLRMTSWMHYLYLDH >gi|299857026|gb|ADWS01000038.1| GENE 5 4133 - 4495 310 120 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_3931 NR:ns ## KEGG: EcSMS35_3931 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 120 35 154 154 238 100.0 6e-62 MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAIHTAGWVSLFTLHVIWP FLWIWATLYQPERGWGMQSHVASQEKATDPEIAALSDRISRLEHQLAAEKKTDYSTFPEI >gi|299857026|gb|ADWS01000038.1| GENE 6 5032 - 6945 2453 637 aa, chain + ## HITS:1 COG:ECs4475_1 KEGG:ns NR:ns ## COG: ECs4475_1 COG2213 # Protein_GI_number: 15833729 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Escherichia coli O157:H7 # 1 492 1 492 492 923 99.0 0 MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLPNETLAKLVGPMITYLL PLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMIAGPLGGWCIKHFDRWVDG KIKSGFEMLVNNFSAGIIGMILAILAFLGIGPIVEALSKMLAAGVNFMVVHDMLPLASIF VEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIEANPGPGMGVLLAYMFFGRGSAK QSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILGGMTGVFTLTILGGGLVSPASPGSI LAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILLKTSKVKEEDDIEAATRRMQDMKAESK GTSPLSAGDVTNDLSHVRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISVTNSAINNL PPDVDLVITHRDLTERAMRQVPQAQHISLTNFLDSGLYTSLTERLVAAQRHTENEVKVKD SLKDSFDDSSANLFKLGAENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDREK LTPTYLGESIAVPHGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEH IQVITSLTNALDDESVIERLAHTTSVDEVLELLAGRK >gi|299857026|gb|ADWS01000038.1| GENE 7 7175 - 8323 1508 382 aa, chain + ## HITS:1 COG:ECs4476 KEGG:ns NR:ns ## COG: ECs4476 COG0246 # Protein_GI_number: 15833730 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 731 99.0 0 MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTV SGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNIIAC ENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRIVPPSASATNDPLEVTVETFS EWIVDKTQFKGTLPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQTIRDAIL DEKIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQKILGRFENPYLKDDVERVGRQPLRK LSAGDRLIKPLLGTLEYSLPHKNLIQGIAGAMHFRSEDDPQAQELAALIADKGPQAALAQ ISGLDANSEVVSEAVTAYKAMQ >gi|299857026|gb|ADWS01000038.1| GENE 8 8323 - 8910 383 195 aa, chain + ## HITS:1 COG:ECs4477 KEGG:ns NR:ns ## COG: ECs4477 COG3722 # Protein_GI_number: 15833731 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 195 1 195 195 367 100.0 1e-101 MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNLL VLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVINRQEYEDAELLMALREEL NHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSLYAMQIQRYQQAVRSTMVLSL TELISRISLKKAFQK >gi|299857026|gb|ADWS01000038.1| GENE 9 8922 - 9131 208 69 aa, chain - ## HITS:1 COG:no KEGG:JW3576 NR:ns ## KEGG: JW3576 # Name: yibT # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 69 1 69 69 121 100.0 6e-27 MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPDESVPLYLQRLEYYRRL YRPKQVEGQ >gi|299857026|gb|ADWS01000038.1| GENE 10 9416 - 9778 527 120 aa, chain + ## HITS:1 COG:no KEGG:ECSP_4596 NR:ns ## KEGG: ECSP_4596 # Name: yibL # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 120 1 120 120 167 100.0 1e-40 MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKL SKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTALGREMGLQEMTGFSKTAF >gi|299857026|gb|ADWS01000038.1| GENE 11 10321 - 11004 228 227 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4578 NR:ns ## KEGG: ECO103_4578 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 227 1 227 227 413 100.0 1e-114 MNLKKIFFSAVTVSVLCALTGCDYIEEGKPESSLLKQQEEHNNKIVLLEKQQAQLKSQLE TIQKQQTGIINSTKTLTHVIKSVKDQQNTFIFTEFNPAKTKYFILNNGSVALAGRVLSID ATENGSVIHISLVNLLSTPISNIGFNATWGGEKPVDAKEFARWQQLLFNTSMKSTLKLLP GQWQDINLTLKGVSPNNLGYLKLAINMENIQFDNLPSAENRQKRSKK >gi|299857026|gb|ADWS01000038.1| GENE 12 11048 - 15898 3674 1616 aa, chain + ## HITS:1 COG:ECs4480 KEGG:ns NR:ns ## COG: ECs4480 COG5295 # Protein_GI_number: 15833734 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 1 1616 1 1588 1588 1999 97.0 0 MNKIFKVIWNPATGNYTVTSETAKSRGKKSGRSKLLISALVAGGMLSSFGALANAGNDNG QGVDYGSGSAGDGWVAIGKGAKANTFMNTSGSSTAVGYDAIAEGQYSSAIGSKTHAIGGA SMAFGVSAISEGDRSIALGASSYSLGQYSMALGRYSKALGKLSIAMGDSSKAEGANAIAL GNATKATEIMSIALGDTANASKAYSMALGASSVASEENAIALGRSSVASGTDSLAFGRQS LASAANAIAIGAETEAAENATAIGNNAKAKGTNSMAMGFGSLADKVNTIALGNGSQALAD NAIAIGQGNKADGVDAIALGNGSQSRGLNTIALGTASNATGDKSLALGSNSSANGINSVA LGADSIADLDNTVSVGNSSLKRKIVNVKNGAIKSDSYDAINGSQLYAISDSVAKRLGGGA AVDVDDGTVTAPTYNLKNGSKNNVGAALAVLDENTLQWDQTKGKYSAAHGTSSPTASVIT DVADGTISASSKDAVNGSQLKATNDDVEANTANIATNTSNIATNTANIATNTTNITNLTD SVGDLQADALLWNETKKAFSAAHGQDTTSKITNVKDADLTADSTDAVNGSQLKTTNDAVA TNTTNIANNTSNIATNTTNISNLTETVTNLGEDALKWDKDNGVFTAAHGTETTSKITNVK DGDLTTGSTDAVNGSQLKTTNDAVATNTTNIATNTTNISNLTETVTNLGEDALKWDKDNG VFTAAHGNNTASKITNILDGTVTATSSDAINGSQLYDLSSNIATYFGGNASVNTDGVFTG PTYKIGETNYYNVGDALAAINSSFSTSLGDALLWDATAGKFSAKHGTNGDASVITDVADG EISDSSSDAVNGSQLHGVSSYVVDALGGGAEVNADGTITAPTYTIANADYDNVGDALNAI DTTLDDALLWDADAGENGAFSAAHGKDKTASVITNVANGAISAASSDAINGSQLYTTNKY IADALGGDAEVNADGTITAPTYTIANAEYNNVGDALDALDDNALLWDETANGGAGAYNAS HDGKASIITNVANGSISEDSTDAVNGSQLNATNMMIEQNTQIINQLAGNTDATYIQENGA GINYVRTNDDGLAFNDASAQGVGATAIGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSV SSRVIAKGSRDTSITENGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTV RQLQNAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVDAN ALNGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGSADGQRQ ITNVAAGSADTDAVNVGQLKVTDAQVSQNTQSITNLDNRVTNLDSRVTNIENGIGDIVTT GSTKYFKTNTDGVDASAQGKDSVAIGSGSIAAADNSVALGTGSVATEENTISVGSSTNQR RITNVAAGKNDTDAVNVAQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGGTTRISNVSA GVNNNDAVNYAQLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMAMTGLPQAYT PGASMASIGGGTYNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAALGAGIQW >gi|299857026|gb|ADWS01000038.1| GENE 13 16267 - 17922 1843 551 aa, chain + ## HITS:1 COG:lldP KEGG:ns NR:ns ## COG: lldP COG1620 # Protein_GI_number: 16131474 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Escherichia coli K12 # 1 551 1 551 551 928 100.0 0 MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAASWTVAIALAVALLFYKM PVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDIIRSSILSITPDQRLQMLI VGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLCLIVNTAPVAFGAMGIPILVA GQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWRGIKETWPAVVVAGGSFAIAQYL SSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFRFGDLGASQVDMTLAHTGYTAGQVL RAWTPFLFLTATVTLWSIPPFKALFASGGALYEWVINIPVPYLDKLVARMPPVVSEATAY AAVFKFDWFSATGTAILFAALLSIVWLKMKPSDAISTFGSTLKELALPIYSIGMVLAFAF ISNYSGLSSTLALALAHTGHAFTFFSPFLGWLGVFLTGSDTSSNALFAALQATAAQQIGV SDLLLVAANTTGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSLIFTCIVGVITT LQAYVLTWMIP >gi|299857026|gb|ADWS01000038.1| GENE 14 17922 - 18698 744 258 aa, chain + ## HITS:1 COG:lldR KEGG:ns NR:ns ## COG: lldR COG2186 # Protein_GI_number: 16131475 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 258 1 258 258 486 99.0 1e-137 MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGV LLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDILEARYAIEASTAWHAAMRA TPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHNIVLLQTMRGFFDVLQSSVKH SRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAMMAHLSFVHTTMKRFDEDQARHA RITRLPGEHYEHSREKNA >gi|299857026|gb|ADWS01000038.1| GENE 15 18695 - 19885 1435 396 aa, chain + ## HITS:1 COG:ECs4483 KEGG:ns NR:ns ## COG: ECs4483 COG1304 # Protein_GI_number: 15833737 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 785 100.0 0 MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSL ETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAI KRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMR RYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWI RDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGD IAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMT LTGAKSISEITQDSLVQGLGKELPTALAPMAKGNAA >gi|299857026|gb|ADWS01000038.1| GENE 16 20071 - 20544 341 157 aa, chain + ## HITS:1 COG:ECs4484 KEGG:ns NR:ns ## COG: ECs4484 COG0219 # Protein_GI_number: 15833738 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 324 100.0 5e-89 MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRH HDFRAFLEAENPQRLFALTTKGTPAHSAVNYQDGDYLMFGPETRGLPASILDALPAEQKI RIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGALLRD >gi|299857026|gb|ADWS01000038.1| GENE 17 20597 - 21418 825 273 aa, chain - ## HITS:1 COG:ECs4485 KEGG:ns NR:ns ## COG: ECs4485 COG1045 # Protein_GI_number: 15833739 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Escherichia coli O157:H7 # 1 273 1 273 273 551 100.0 1e-157 MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPA IAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWL WNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSV TLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVP ARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI >gi|299857026|gb|ADWS01000038.1| GENE 18 21498 - 22517 1032 339 aa, chain - ## HITS:1 COG:ECs4486 KEGG:ns NR:ns ## COG: ECs4486 COG0240 # Protein_GI_number: 15833740 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 339 1 339 339 664 100.0 0 MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATLERDRCNAAFLPDVPFP DTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLEAETGRLL QDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTDQTFADDLQQLLHCGKSFRVY SNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMSRLGAALGADPATF MGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQEKIGQVVEGYRNTKEVRELAHRF GVEMPITEEIYQVLYCGKNAREAALTLLGRARKDERSSH >gi|299857026|gb|ADWS01000038.1| GENE 19 22517 - 22984 500 155 aa, chain - ## HITS:1 COG:ECs4487 KEGG:ns NR:ns ## COG: ECs4487 COG1952 # Protein_GI_number: 15833741 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 309 100.0 1e-84 MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDLDTASSQLADDVYEVVL RVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYCPNILFPYARECITSMVSR GTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA >gi|299857026|gb|ADWS01000038.1| GENE 20 23047 - 23298 319 83 aa, chain - ## HITS:1 COG:ECs4488 KEGG:ns NR:ns ## COG: ECs4488 COG0695 # Protein_GI_number: 15833742 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Escherichia coli O157:H7 # 1 83 1 83 83 173 100.0 9e-44 MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDA QHIGGCDDLYALDARGGLDPLLK >gi|299857026|gb|ADWS01000038.1| GENE 21 23440 - 23871 418 143 aa, chain - ## HITS:1 COG:ECs4489 KEGG:ns NR:ns ## COG: ECs4489 COG0607 # Protein_GI_number: 15833743 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 276 99.0 7e-75 MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLR QRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVIDGSGMQCQEPANALTKAGFA QVFVLKEGVAGWAGENLPLVRGK >gi|299857026|gb|ADWS01000038.1| GENE 22 24116 - 25660 1717 514 aa, chain + ## HITS:1 COG:ECs4490 KEGG:ns NR:ns ## COG: ECs4490 COG0696 # Protein_GI_number: 15833744 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 1008 100.0 0 MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQ MGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLS AGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAALGKGR VASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADTAVAGLQAAYARDENDEFVKATV IRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAA DIKTAVAYPPASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILI NSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEA LDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKA VAGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE >gi|299857026|gb|ADWS01000038.1| GENE 23 25694 - 26953 1264 419 aa, chain + ## HITS:1 COG:ECs4491 KEGG:ns NR:ns ## COG: ECs4491 COG4942 # Protein_GI_number: 15833745 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Escherichia coli O157:H7 # 1 419 9 427 427 602 100.0 1e-172 MTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADERDQLKSIQADIAAKERAVRQKQQQ RASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQ LDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAQLKQTREEVAMQRAEL EEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSIQQGQQQLSELRANESRLRNSI ARAEAAAKARAEREAREAQAVRDRQKEATRKGTTYKPTESEKSLMSRTGGLGAPRGQAFW PVRGPTLHRYGEQLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGK GDMSLYGYNQSALVSVGSQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR >gi|299857026|gb|ADWS01000038.1| GENE 24 26957 - 27916 792 319 aa, chain + ## HITS:1 COG:ECs4492 KEGG:ns NR:ns ## COG: ECs4492 COG2861 # Protein_GI_number: 15833746 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 43 319 1 277 277 529 99.0 1e-150 MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPH AREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGI NNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDD SQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPPDITLVKASSLLNE PQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQH QWQGWGKQPEAAKFNASAN >gi|299857026|gb|ADWS01000038.1| GENE 25 27903 - 28934 495 343 aa, chain - ## HITS:1 COG:yibD KEGG:ns NR:ns ## COG: yibD COG0463 # Protein_GI_number: 16131486 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 343 2 344 344 679 99.0 0 MNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDGSTDNSVEIAKHYAENYP HVRLLHQANAGASVARNRGIEVATGKYVAFVDADDEVYPTMYETLMTMALEDDLDVAQCN ADWCFRETGETWQSIPSDRLRSTGVLTGPDWLRMGLSSRRWTHVVWMGVYRRDVIVKNNI KFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLHNTSVSRLHRQGNKNLNYQRHYIK ITRLLEKLNRNYADKITIYPEFHQQITYEALRVCHAVRKEPDILTRQRMIAEIFTSGMYK RLITNVRSVKVGYQALLWSFRLWQWRDKTRSHHRITRSAFNLR >gi|299857026|gb|ADWS01000038.1| GENE 26 29176 - 30201 1105 341 aa, chain - ## HITS:1 COG:tdh KEGG:ns NR:ns ## COG: tdh COG1063 # Protein_GI_number: 16131487 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 341 1 341 341 709 99.0 0 MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMV VGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGC FAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAA AVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAELGMTEGFDVGLEMS GAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAA LIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSGKVILSWD >gi|299857026|gb|ADWS01000038.1| GENE 27 30211 - 31407 1602 398 aa, chain - ## HITS:1 COG:ECs4495 KEGG:ns NR:ns ## COG: ECs4495 COG0156 # Protein_GI_number: 15833749 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Escherichia coli O157:H7 # 1 398 1 398 398 775 100.0 0 MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPD LIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFE TLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIAT DGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITG TLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRD RLWANARQFREQMSAAGFTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVV PKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGVIA >gi|299857026|gb|ADWS01000038.1| GENE 28 31621 - 32553 1149 310 aa, chain + ## HITS:1 COG:ECs4497 KEGG:ns NR:ns ## COG: ECs4497 COG0451 # Protein_GI_number: 15833751 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 621 99.0 1e-178 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLIQI MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT EYMAWLNRDA >gi|299857026|gb|ADWS01000038.1| GENE 29 32563 - 33609 997 348 aa, chain + ## HITS:1 COG:rfaF KEGG:ns NR:ns ## COG: rfaF COG0859 # Protein_GI_number: 16131491 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 1 348 1 348 348 711 99.0 0 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG HGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGIPHRTGWRGEMRYGLLNDV RVLDKEAWPLMVERYVALAYDKGIMRTAQDLPQPLLWPQLQVSEGEKSYTCNQFSLSSER PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQ AWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSH KARVIRLITGYHKVRKGDAAEGYHQSLIDITPQRVLEELNALLLQEEA >gi|299857026|gb|ADWS01000038.1| GENE 30 33613 - 34572 678 319 aa, chain + ## HITS:1 COG:rfaC KEGG:ns NR:ns ## COG: rfaC COG0859 # Protein_GI_number: 16131492 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 1 317 1 317 319 610 96.0 1e-174 MRVLIVKTSSMGDVLHTLPALTDAQQAIPEIKFDWVVEEGFAQIPSWHAAVERVIPVAIR RWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAALVTRLAHGVKHGMDWQTAR EPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLPTDAGEY AVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLP KMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP LMNLNNLEAAAVYKKITLI >gi|299857026|gb|ADWS01000038.1| GENE 31 34620 - 34868 97 82 aa, chain - ## HITS:1 COG:no KEGG:SDY_4054 NR:ns ## KEGG: SDY_4054 # Name: waaL # Def: lipid A-core:surface polymer ligase WaaL # Organism: S.dysenteriae # Pathway: Lipopolysaccharide biosynthesis [PATH:sdy00540]; Metabolic pathways [PATH:sdy01100] # 1 82 336 417 417 151 96.0 8e-36 MHNEIVESLSTKGKIGLLVLIMFYVAMIYYCIREKKYILLVFPASIMLFGISDVITHAKP IPASWIVCLFLSISFLSKKEPQ >gi|299857026|gb|ADWS01000038.1| GENE 32 35908 - 36681 218 257 aa, chain - ## HITS:1 COG:PM1143 KEGG:ns NR:ns ## COG: PM1143 COG3306 # Protein_GI_number: 15603008 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase involved in LPS biosynthesis # Organism: Pasteurella multocida # 4 178 6 178 222 63 30.0 4e-10 MNLPIYIVSLKRDIERRNKINDVFHRLNINFDFFDAIDAKDPQNKEIIDKMRLSGVGAEM TDGEIACTLSHQLIYKDMIDKNIEWAVILEDDVIVNEKFKKFLQYFNLSEKDKLKHNNLY LLGGQKGLHDYPVLGQSLFSKVKVSTCTFRRVNFNKNKIRRTCSYLMNKDMAQKLLKLTK DYGTYRADSWKLMHQHNIIKEFYLDEIILHPILNEFNSHLESERLLTSEKKQPRTRLQKR MKFIRSWIKVAFFSLLK >gi|299857026|gb|ADWS01000038.1| GENE 33 36713 - 37741 654 342 aa, chain - ## HITS:1 COG:rfaJ KEGG:ns NR:ns ## COG: rfaJ COG1442 # Protein_GI_number: 16131497 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Escherichia coli K12 # 19 338 23 338 338 219 38.0 6e-57 MDLLAESITEVAVSGEIANTDRVLNIAYGIDRNFLFGAAVSMQSVVMHNPDLAVKFHLFT DYIDEDYLQRVNAFTSKNANVEVIIYKVSNAFIDIFPSLKQWSYATFFRLVAFQYLSETI ENLLYIDADVICKGSLAGLLDINFDEDKFAAVIKDVPFMQEKPAKRLAIEGLPGNYFNAG VVYLQLEAWAKNDFMNKAIAMLASDPQHTKYKCLDQDILNILFFGHCIFISGDYDCFYGI DYELKNKSDEDYKKTITDDTKLIHYVGVTKPWNDWTNYPCQKYFNEAYQASCWNDVAFIP ATNEKQYQVKSRHLKRNGNIASSFYYFILYYSKKIARKHFSK >gi|299857026|gb|ADWS01000038.1| GENE 34 37767 - 38459 517 230 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_4128 NR:ns ## KEGG: EcE24377A_4128 # Name: rfaY # Def: lipopolysaccharide core biosynthesis protein # Organism: E.coli_E24377A # Pathway: Lipopolysaccharide biosynthesis [PATH:ecw00540]; Metabolic pathways [PATH:ecw01100] # 1 230 1 230 230 422 100.0 1e-117 MITSIRYRGFSFYYKDNDNKYKEIFDEILAYNFKTVKVLRNIDDTKVSLIDTKYGRYVFK VFAPKTKRNERFLKSFVKGDYYQNLIVETDRVRSAGLTFPNDFYFLAERKIFNYASVFIM LIEYVEGVELNDMPIIPENVKAEIKASMEKLHALNMLSGDPHRGNFIVSKDGVRIIDLSG KSCTAERKARDRLAMERHLGIVNEIKDYGYYSVIYRTKLRKFIKKLKGKA >gi|299857026|gb|ADWS01000038.1| GENE 35 38469 - 39464 374 331 aa, chain - ## HITS:1 COG:STM3717 KEGG:ns NR:ns ## COG: STM3717 COG1442 # Protein_GI_number: 16767002 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Salmonella typhimurium LT2 # 13 331 18 332 336 275 47.0 1e-73 MNEFIKERFSYLADNKKENAPELNVSYGIDKNFLYGAGVSISSVLINNSDINFVFHVFTD YVDDDYLKSFNETAKQFNTSIIVYLIDPKYFADLPTSQFWSYATYFRVLSFEYLSESIST LLYLDADVVCKGSLKPLTEIIFKDEFAAVIPDNDSTQAACAKRLNIPEMNGRYFNAGVIY VNLKKWHEANLTPYLLKLLRGETKYGSLKYLDQDALNIAFNMNNIYLAKDFDTIYTLKNE LYDRSHRKYQQTITDKTVLIHYTGITKPWHSWAGYPSASYFNIAREQSPWKKYPLKEART VAEMQKQYKHLFAHGEYIKGITSLIKYKLKK >gi|299857026|gb|ADWS01000038.1| GENE 36 39481 - 40497 369 338 aa, chain - ## HITS:1 COG:STM3718 KEGG:ns NR:ns ## COG: STM3718 COG1442 # Protein_GI_number: 16767003 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Salmonella typhimurium LT2 # 1 338 1 337 337 359 51.0 4e-99 MSAHYFNPQEMINKTIIFDERPAASVASSFHVAYGIDKNFLFGCGVSITSVLLHNNDVSF VFHVFIDDIPEADIQRLAQLAKSYRTCIQIHLVNCERLKALPTTKNWSIAMYFRFVIADY FIDQQDKILYLDADIACQGNLKPLITMDLANNVAAVVTERDANWWSLRGQSLQCNELEKG YFNSGVLLINTLAWAQESVSAKAMSMLADKAIVSRLTYMDQDILNLILLGKVKFIDAKYN TQFSLNYELKKSFVCPINDETVLIHYVGPTKPWHYWAGYPSAQPFIKAKEASPWKNEPLM RPVNSNYARYCAKHNFKQNKPINGIMNYIYYFYLKIIK >gi|299857026|gb|ADWS01000038.1| GENE 37 40513 - 41310 489 265 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_4131 NR:ns ## KEGG: EcE24377A_4131 # Name: rfaP # Def: lipopolysaccharide core biosynthesis protein RfaP # Organism: E.coli_E24377A # Pathway: Lipopolysaccharide biosynthesis [PATH:ecw00540]; Metabolic pathways [PATH:ecw01100] # 1 265 1 265 265 530 100.0 1e-149 MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAGKSYFLKWHRGTTLKEI IKNLLSLRMPVLGADREWNAIHRLRDVGVDTMYGVAFGEKGMNPLTRTSFIITEDLTPTI SLEDYCADWATNPPDVRVKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFSGKEEE LKISVIDLHRAQLRTRVPRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFAAPLKDILK QEQGLLSQAEAKATKIRERTIRKSL >gi|299857026|gb|ADWS01000038.1| GENE 38 41303 - 42427 848 374 aa, chain - ## HITS:1 COG:ECs4506 KEGG:ns NR:ns ## COG: ECs4506 COG0438 # Protein_GI_number: 15833760 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 374 1 374 374 764 99.0 0 MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGECPDVFELIKVPVKSHT NHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVCYAEKVAQEKGFFYRLTSR YRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAERFHILPPGIYPDRKYSQQPA NSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEALASLPDSLRHNTLLYVVGQDKPR KFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTT AVCGYAHYIVDANCGEAIAEPFRQETLNEILRKALTQSSLRQAWAENARHYADTQDLYSL PEKAADIITGGLDG >gi|299857026|gb|ADWS01000038.1| GENE 39 42424 - 43446 515 340 aa, chain - ## HITS:1 COG:ECs4507 KEGG:ns NR:ns ## COG: ECs4507 COG0859 # Protein_GI_number: 15833761 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 1 340 13 352 352 695 99.0 0 MRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNKKAKASEK IANFFHLIKVLRANKYDLIVNLTDQWMVAILVRLLNTRVKISQDYHHRQSAFWRKSFTHL VPLQGGNVVESNLSVLTPLGLDSLVKQTTMSYPPASWKRMRRELDHAGVGQNYVVIQPTA RQIFKCWDNAKFSAVIDALHARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVT FPELGALIDHAQLFIGVDSAPAHIAAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYR EMPTRDQRDRNEMYLSVIPAADVIAAVDKLLTSSTTGTSL >gi|299857026|gb|ADWS01000038.1| GENE 40 43895 - 44834 709 313 aa, chain + ## HITS:1 COG:ECs4508 KEGG:ns NR:ns ## COG: ECs4508 COG1519 # Protein_GI_number: 15833762 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Escherichia coli O157:H7 # 1 313 1 313 425 610 100.0 1e-174 MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRHPLKPGGIMLHSVSVGE TLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNK VDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRITLI AAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATST HEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSTS TQVVVGDTMGELM Prediction of potential genes in microbial genomes Time: Sun May 15 22:44:32 2011 Seq name: gi|299857025|gb|ADWS01000039.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont38.1, whole genome shotgun sequence Length of sequence - 42427 bp Number of predicted genes - 38, with homology - 38 Number of transcription units - 29, operones - 7 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 14 - 73 3.4 1 1 Tu 1 . + CDS 108 - 965 165 ## COG5433 Transposase + Term 1087 - 1134 1.5 - Term 1071 - 1122 3.0 2 2 Op 1 45/0.000 - CDS 1130 - 2254 1154 ## COG0842 ABC-type multidrug transport system, permease component 3 2 Op 2 10/0.000 - CDS 2254 - 4989 2591 ## COG1131 ABC-type multidrug transport system, ATPase component 4 2 Op 3 . - CDS 4986 - 6053 1119 ## COG0845 Membrane-fusion protein - Prom 6261 - 6320 3.6 5 3 Tu 1 . - CDS 6419 - 8041 54 ## ECIAI1_3633 hypothetical protein - Prom 8119 - 8178 6.0 - Term 8194 - 8236 2.6 6 4 Tu 1 . - CDS 8303 - 8611 63 ## EcolC_0226 hypothetical protein - Prom 8765 - 8824 4.0 7 5 Tu 1 . - CDS 8841 - 9110 128 ## ECSE_3755 hypothetical protein + Prom 10059 - 10118 7.9 8 6 Tu 1 . + CDS 10337 - 11344 474 ## G2583_4217 inner membrane protein YhiM + Term 11365 - 11406 3.0 - Term 11585 - 11630 2.3 9 7 Tu 1 . - CDS 11660 - 12862 992 ## COG2081 Predicted flavoproteins - Prom 12950 - 13009 8.2 + Prom 12925 - 12984 6.9 10 8 Tu 1 . + CDS 13094 - 14593 1529 ## COG0306 Phosphate/sulphate permeases + Term 14610 - 14647 6.9 11 9 Tu 1 . - CDS 14664 - 14945 217 ## G2583_4220 universal stress protein B - Prom 15157 - 15216 2.2 + Prom 15134 - 15193 5.2 12 10 Tu 1 . + CDS 15390 - 15824 605 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 15847 - 15886 7.1 + Prom 15962 - 16021 6.2 13 11 Tu 1 . + CDS 16142 - 17611 1735 ## COG3104 Dipeptide/tripeptide permease + Term 17628 - 17663 7.4 - Term 17616 - 17651 7.4 14 12 Op 1 5/0.286 - CDS 17660 - 18412 720 ## COG0500 SAM-dependent methyltransferases 15 12 Op 2 . - CDS 18420 - 20462 2602 ## COG0339 Zn-dependent oligopeptidases - Prom 20518 - 20577 3.1 + Prom 20547 - 20606 4.1 16 13 Op 1 7/0.000 + CDS 20665 - 21507 928 ## COG2961 Protein involved in catabolism of external DNA 17 13 Op 2 . + CDS 21579 - 22931 502 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 22940 - 22978 8.6 - Term 22928 - 22966 6.1 18 14 Tu 1 . - CDS 22985 - 23134 101 ## EcE24377A_3983 hypothetical protein - Prom 23262 - 23321 4.7 19 15 Tu 1 . + CDS 23096 - 23269 152 ## EC55989_3940 hypothetical protein + Term 23403 - 23431 -1.0 + Prom 23283 - 23342 4.0 20 16 Op 1 7/0.000 + CDS 23577 - 23930 209 ## COG0640 Predicted transcriptional regulators 21 16 Op 2 2/0.429 + CDS 23984 - 25273 1465 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases 22 16 Op 3 . + CDS 25286 - 25711 594 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 23 17 Tu 1 . - CDS 25834 - 26130 296 ## COG0640 Predicted transcriptional regulators - Prom 26355 - 26414 4.4 + Prom 26154 - 26213 3.8 24 18 Tu 1 . + CDS 26238 - 27239 493 ## COG0701 Predicted permeases + Term 27403 - 27450 7.6 + Prom 27586 - 27645 7.8 25 19 Op 1 . + CDS 27819 - 29042 32 ## ECIAI1_3653 hypothetical protein + Prom 29044 - 29103 8.7 26 19 Op 2 . + CDS 29290 - 29856 590 ## COG3065 Starvation-inducible outer membrane lipoprotein + Term 29868 - 29909 9.3 + Prom 29888 - 29947 6.1 27 20 Tu 1 . + CDS 30039 - 30542 319 ## COG2771 DNA-binding HTH domain-containing proteins + Term 30658 - 30703 0.5 28 21 Tu 1 . - CDS 30584 - 31231 606 ## COG1285 Uncharacterized membrane protein - Term 31235 - 31277 7.2 29 22 Op 1 . - CDS 31295 - 31633 345 ## SSON_3577 acid-resistance protein - Prom 31665 - 31724 2.4 - Term 31648 - 31690 0.4 30 22 Op 2 . - CDS 31737 - 32069 481 ## EC55989_3953 acid-resistance protein - Prom 32157 - 32216 5.9 + Prom 32134 - 32193 5.5 31 23 Tu 1 . + CDS 32324 - 32896 513 ## COG3247 Uncharacterized conserved protein + Term 32914 - 32959 12.6 32 24 Tu 1 . + CDS 33695 - 34222 380 ## COG2771 DNA-binding HTH domain-containing proteins + Prom 34392 - 34451 2.8 33 25 Op 1 27/0.000 + CDS 34561 - 35718 1087 ## COG0845 Membrane-fusion protein 34 25 Op 2 . + CDS 35743 - 38856 3043 ## COG0841 Cation/multidrug efflux pump + Term 38868 - 38913 10.6 35 26 Tu 1 . - CDS 38793 - 39074 147 ## gi|293412945|ref|ZP_06655613.1| predicted protein - Term 39120 - 39147 -0.1 36 27 Tu 1 . - CDS 39219 - 39947 213 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 40111 - 40170 7.7 - Term 40093 - 40130 -0.9 37 28 Tu 1 . - CDS 40315 - 41079 33 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 41439 - 41489 10.0 38 29 Tu 1 . - CDS 41509 - 42366 1146 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins Predicted protein(s) >gi|299857025|gb|ADWS01000039.1| GENE 1 108 - 965 165 285 aa, chain + ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 285 94 378 378 568 98.0 1e-162 MRDCHSSNDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIETDEKSNEIT AIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLK ELNNPEHDSYAISEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQ KKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELF SGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS >gi|299857025|gb|ADWS01000039.1| GENE 2 1130 - 2254 1154 374 aa, chain - ## HITS:1 COG:yhhJ KEGG:ns NR:ns ## COG: yhhJ COG0842 # Protein_GI_number: 16131357 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli K12 # 1 374 2 375 375 667 100.0 0 MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTPGSLNLAPIAIADMDQS QLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVN VDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVM AIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPFEIMMAKIWSMGLVVLVVSGLSL VLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQM LSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFT IALLRFRKTIGTMA >gi|299857025|gb|ADWS01000039.1| GENE 3 2254 - 4989 2591 911 aa, chain - ## HITS:1 COG:yhiH_1 KEGG:ns NR:ns ## COG: yhiH_1 COG1131 # Protein_GI_number: 16131358 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Escherichia coli K12 # 18 549 1 532 532 1084 99.0 0 MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISG ARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHD KAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDP LSRSQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWLVAMNAGEVLATGSAEELRQQTQ SATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIP RGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQSFSL YNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAV AVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLM HAGKVLASGTPQELVEKRGAASLEEAFIAYLQEAAGQSNEAEAPPVIHDTTHAPRQGFSL RRLFSYSRREALELRRDPVRSTLALMGTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQ AWTLNLSGSRYFIEQPPLTSYDELDRRMRAGDITVAIENPPNFGRDIARGTPVELGVWID GAMPSRAETVKGYVQAMHQSWLQDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPA VIPLLLMMIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLC GLSVFVFGVPHKGSFLTLTLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQ FSGMIDPVASLEGPGRWIGEVYPTSHFLTIARGTFSKALDLTDLWQLFIPLLIAIPLVMG LSILLLKKQEG >gi|299857025|gb|ADWS01000039.1| GENE 4 4986 - 6053 1119 355 aa, chain - ## HITS:1 COG:yhiI KEGG:ns NR:ns ## COG: yhiI COG0845 # Protein_GI_number: 16131359 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 1 355 1 355 355 566 99.0 1e-161 MDKSKRHLAWWVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDT ILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQS LVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAA IEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVL NMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVET SDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ >gi|299857025|gb|ADWS01000039.1| GENE 5 6419 - 8041 54 540 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_3633 NR:ns ## KEGG: ECIAI1_3633 # Name: yhiJ # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 540 1 540 540 1099 99.0 0 MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKI DDWQIERFQQSIRDDKISFTIQTNHSEKYSMLSDMRAHILRRDNNYQFIVTINSKNYGCY LDNTDINWCSIVYLLNNMTVNDDANDVAVTESYKPVWDWKISQFNVSDIKFETMINPQFA DRTYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFATGHLRIMAEGENFLSQLLNIEDE VLNVLLRENFNEQLDTNVNTIISILNRRDIVLESLQPYLVINKDAVTPCTFLGDQTGDRF SNICGDQFIIDLLKRIMSINENVHVLAGNHETNCNGNYMQNFTRMKPLDEDTYAGIKDYP VCFYDPKYKIMANHHGITFDEQRKRYIIGPITVSIDEMTNALDPVELAAIINKKHHAIIN GKKFKTSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHNGNGGRECIGETG TVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHEKNRNGLMPLIRRRTMLQL >gi|299857025|gb|ADWS01000039.1| GENE 6 8303 - 8611 63 102 aa, chain - ## HITS:1 COG:no KEGG:EcolC_0226 NR:ns ## KEGG: EcolC_0226 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ATCC8739 # Pathway: not_defined # 1 102 434 535 535 207 99.0 1e-52 MDDPLFHLIRSNTLKPTPVYANYFDNTTDFRPARKRIFIYGETLKGEDPSKYIRQKYGHH GVGVDQNQQFDNGIMGLNSLKEARDKNNKIIYSSGLSCFQSH >gi|299857025|gb|ADWS01000039.1| GENE 7 8841 - 9110 128 89 aa, chain - ## HITS:1 COG:no KEGG:ECSE_3755 NR:ns ## KEGG: ECSE_3755 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 89 267 355 529 171 95.0 1e-41 MLYNLLNTRDMILNELHQHVFLKDDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNM EGNKDSRINKNVIVLARNHEINFNGNYTA >gi|299857025|gb|ADWS01000039.1| GENE 8 10337 - 11344 474 335 aa, chain + ## HITS:1 COG:no KEGG:G2583_4217 NR:ns ## KEGG: G2583_4217 # Name: yhiM # Def: inner membrane protein YhiM # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 335 49 383 383 583 100.0 1e-165 MGLICIALGGFVLESSGQSEYFVAGHVLISLAAICLALFTTAFIIISQLTRGVNTFYNTL FPIIGYAGSIITMIWGWALLAGNDVMADEFVAGHVIFGVGMIAACVSTVAASSGHFLLIP KNAAGSKSDGTPVQAYSSLIGNCLIAVPVLLTLLGFIWSITLLRSADITPHYVAGHVLLG LTAICACLIGLVATIVHQTRNTFSTKEHWLWCYWVIFLGSITVLQGIYVLVSSDASARLA PGIILICLGMICYSIFSKVWLLALVWRRTCSLANRIPMIPVFTCLFCLFLASFLAEMAQT DMGYFIPSRVLVGLGAVCFTLFSIVSILEAGSAKK >gi|299857025|gb|ADWS01000039.1| GENE 9 11660 - 12862 992 400 aa, chain - ## HITS:1 COG:yhiN KEGG:ns NR:ns ## COG: yhiN COG2081 # Protein_GI_number: 16131364 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Escherichia coli K12 # 1 400 1 400 400 806 99.0 0 MERFDAIIIGAGAAGIFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPG AYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEK GNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQF GLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGIVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQ IPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVP GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS >gi|299857025|gb|ADWS01000039.1| GENE 10 13094 - 14593 1529 499 aa, chain + ## HITS:1 COG:ECs4365 KEGG:ns NR:ns ## COG: ECs4365 COG0306 # Protein_GI_number: 15833619 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Escherichia coli O157:H7 # 1 499 1 499 499 893 100.0 0 MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVF NFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASS SHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRY WSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLV LIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQ PAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGV SADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTY AQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFT LPAAVLLSGGLYWLSLQFL >gi|299857025|gb|ADWS01000039.1| GENE 11 14664 - 14945 217 93 aa, chain - ## HITS:1 COG:no KEGG:G2583_4220 NR:ns ## KEGG: G2583_4220 # Name: uspB # Def: universal stress protein B # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 93 19 111 111 184 100.0 1e-45 MARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDE FIRRCERVRRQFILTSALCGLVVVSLIALMIWH >gi|299857025|gb|ADWS01000039.1| GENE 12 15390 - 15824 605 144 aa, chain + ## HITS:1 COG:ECs4367 KEGG:ns NR:ns ## COG: ECs4367 COG0589 # Protein_GI_number: 15833621 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 144 1 144 144 271 100.0 3e-73 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK RISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLM SSARQLINTVHVDMLIVPLRDEEE >gi|299857025|gb|ADWS01000039.1| GENE 13 16142 - 17611 1735 489 aa, chain + ## HITS:1 COG:yhiP KEGG:ns NR:ns ## COG: yhiP COG3104 # Protein_GI_number: 16131368 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 489 1 489 489 865 99.0 0 MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQLGFSQEQAFVTFGAFA ALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSLLKPDLIFIALGTIAVGNG LFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIALSLAPVIADRFGYSVTYNLCG AGLIIALLVYIACRGMVKDIGSEPDFKPMSFSKLLYVLLGSVVMIFVCAWLMHNVEVANL VLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNV HHEILGFSINPVSFQALNPFWVVLASPILAGIYTHLGNKGKDLSMPMKFTLGMFMCSLGF LTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMW FLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMLLMVPWLK RMIATPESH >gi|299857025|gb|ADWS01000039.1| GENE 14 17660 - 18412 720 250 aa, chain - ## HITS:1 COG:ECs4369 KEGG:ns NR:ns ## COG: ECs4369 COG0500 # Protein_GI_number: 15833623 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 483 99.0 1e-136 MKICLIDETGTGDGALSVLAVRWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFV GGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNP VVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKS ALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGH RFDIYAGTPV >gi|299857025|gb|ADWS01000039.1| GENE 15 18420 - 20462 2602 680 aa, chain - ## HITS:1 COG:ECs4370 KEGG:ns NR:ns ## COG: ECs4370 COG0339 # Protein_GI_number: 15833624 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Escherichia coli O157:H7 # 1 680 1 680 680 1368 99.0 0 MTNPLLTPFELPPFSKILPEHVVPAVTKALNDCRENVERVVAQGAPYTWENLCQPLAEVD DVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYA TLNTAQKKAVDNALRDFELSGIGLPIEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKL VTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPSYLPVMTYCDNQALREEMYRAYS TRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFENYAFKSLATKMAENPQQVLDFLTD LAKRARPQGEKELAQLRAFAKAEFGVDELQPWDIAYYSEKQKQHLYSISDEQLRPYFPEN KAVNGLFEVVKRIYGITAKERKDVDVWHPDVRFFELYDENNELRGSFYLDLYARENKRGG AWMDDCVGQMRKADGSLQKPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGLHHMLT RIETAGVSGISGVPWDAVELPSQFMENWCWEPEALAFISGHYETGEPLPKELLDKMLAAK NYQAALFILRQLEFGLFDFRLHAEFRPDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFS HIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFK RFRGREPQLDAMLEHYGIKG >gi|299857025|gb|ADWS01000039.1| GENE 16 20665 - 21507 928 280 aa, chain + ## HITS:1 COG:ECs4371 KEGG:ns NR:ns ## COG: ECs4371 COG2961 # Protein_GI_number: 15833625 # Func_class: R General function prediction only # Function: Protein involved in catabolism of external DNA # Organism: Escherichia coli O157:H7 # 1 280 1 280 280 555 99.0 1e-158 MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI AEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE >gi|299857025|gb|ADWS01000039.1| GENE 17 21579 - 22931 502 450 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 5 444 4 442 458 197 31 7e-50 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIR EAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA KTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIAV ELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNADG SLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYA VGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAR EQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFA VALKMGATKKDFDNTVAIHPTAAEEFVTMR >gi|299857025|gb|ADWS01000039.1| GENE 18 22985 - 23134 101 49 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3983 NR:ns ## KEGG: EcE24377A_3983 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 49 1 49 49 68 97.0 8e-11 MRRDRQWMSKRMHSHSIAWRKRVIDKAIIVLGALIALLELIRFLLQLLN >gi|299857025|gb|ADWS01000039.1| GENE 19 23096 - 23269 152 57 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3940 NR:ns ## KEGG: EC55989_3940 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 57 3 59 59 97 100.0 1e-19 MHPLTHPLPVTAHALLLDNGILTPARASVNGTTRTSDQDFESVYAHYQSENASELTG >gi|299857025|gb|ADWS01000039.1| GENE 20 23577 - 23930 209 117 aa, chain + ## HITS:1 COG:arsR KEGG:ns NR:ns ## COG: arsR COG0640 # Protein_GI_number: 16131373 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 117 1 117 117 225 100.0 2e-59 MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLL LDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKVQAIVRNLARQNCSGDSKNICS >gi|299857025|gb|ADWS01000039.1| GENE 21 23984 - 25273 1465 429 aa, chain + ## HITS:1 COG:arsB KEGG:ns NR:ns ## COG: arsB COG1055 # Protein_GI_number: 16131374 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Escherichia coli K12 # 1 429 8 436 436 680 100.0 0 MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAF IAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTP IVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLGFREYASVMV PVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFV LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAG LTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEA MVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWGYYFRTGIIMTLPVLFVTLAA LALRLSFTL >gi|299857025|gb|ADWS01000039.1| GENE 22 25286 - 25711 594 141 aa, chain + ## HITS:1 COG:arsC KEGG:ns NR:ns ## COG: arsC COG1393 # Protein_GI_number: 16131375 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli K12 # 1 141 1 141 141 268 98.0 2e-72 MSNITIYHNPACGTSRNTLEMILNSGTEPTIIYYLETPPTRDELVKLIADMGISVRALLR KNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLEILPDAQ KGAFSKEDGEKVVDEAGKRLK >gi|299857025|gb|ADWS01000039.1| GENE 23 25834 - 26130 296 98 aa, chain - ## HITS:1 COG:mll2166 KEGG:ns NR:ns ## COG: mll2166 COG0640 # Protein_GI_number: 13472009 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 1 95 1 95 106 102 51.0 2e-22 MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVG LVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKIA >gi|299857025|gb|ADWS01000039.1| GENE 24 26238 - 27239 493 333 aa, chain + ## HITS:1 COG:Cj1560 KEGG:ns NR:ns ## COG: Cj1560 COG0701 # Protein_GI_number: 15792865 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Campylobacter jejuni # 47 332 1 274 274 161 34.0 2e-39 MSSWLAMLQDAAEMFVFLAVELSLLFIVISAGVSLIRQKVPDHKIQQMMGARKGRGYLLA ALLGAVTPFCSCSTIPMLRGLLSAKAGFGPTLTFLFVSPLLNPIIVGLMWMTFGWKVTLL YAIIAAGVSVLASIILDSLGFERHIIASKSSSANCCALAKTSPGTTYTPIKVSCCSPAAK AIENPVVTCCSTKAVVSINPIKLATKDALQQFKDVLPYLLLGVLIGSFIYGFIPSAWIAA HAGADNPFAIPLSAVVGIPLYIRAEAVIPLASVLMTKGMGLGALMALIIGSAGASLTEVI LLKSMFRMPMIAAFLTVILGMAILMGYLTQLLF >gi|299857025|gb|ADWS01000039.1| GENE 25 27819 - 29042 32 407 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3653 NR:ns ## KEGG: ECIAI1_3653 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 407 1 407 407 771 100.0 0 MSIDFTPGIINTYHGDIYNCTTNTDNVKTPDTSKWPCDNWEEQQPINSTFSGEGYNPEQF DLAQQQLQQINACHTNTTYTNADYSKVVVQLVSLINNIETISSTPLTQQTQSILNQIHNI RYEKDKDSVCQIIVVVNPEPNNPIITKILVEEGIPEIFSVQTVSSDNKNFAGQRADLPTD IRDIQSLYLKMAKLYIEHSENENRMEALAGCDFIDFNMTGQDMSRLVLTLSNFYFEDLLN INFTDANLFNTIFSHKENPIPKLHKYEQHLDKQINGLFSTLLTINDNSLRAKAEIASRII DFLEAKVVNLSFDDILKYKQEFKKICYKQLQEFTTPSLYNKIQKWATMSKNEFIAFHYET LQPEKISYPFYLKRDLPNEKDINYGVEIEIPSGKRIRLSNHYQNIIP >gi|299857025|gb|ADWS01000039.1| GENE 26 29290 - 29856 590 188 aa, chain + ## HITS:1 COG:ECs4377 KEGG:ns NR:ns ## COG: ECs4377 COG3065 # Protein_GI_number: 15833631 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Starvation-inducible outer membrane lipoprotein # Organism: Escherichia coli O157:H7 # 1 188 12 199 199 381 100.0 1e-106 MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPGLYVGQQARFGGKVI NVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFLDPVNYRNHFVTILGTIQG EQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYGYGAFWPEPGWGAPYYTNAVS QVTPELVK >gi|299857025|gb|ADWS01000039.1| GENE 27 30039 - 30542 319 167 aa, chain + ## HITS:1 COG:ECs4378 KEGG:ns NR:ns ## COG: ECs4378 COG2771 # Protein_GI_number: 15833632 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 167 10 176 176 296 100.0 9e-81 MFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVIIDTLMNNVFHSNFLTQIERLKPVHV IIFSPFNIKRCLGKVPVTFVPRTITIIDFVALINGSYCSVPEANVSLSRKQHQVLSCIAN QMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELVRHQHIDYLV >gi|299857025|gb|ADWS01000039.1| GENE 28 30584 - 31231 606 215 aa, chain - ## HITS:1 COG:ECs4388 KEGG:ns NR:ns ## COG: ECs4388 COG1285 # Protein_GI_number: 15833642 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 381 100.0 1e-106 MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLD HVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGI YGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENED HEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS >gi|299857025|gb|ADWS01000039.1| GENE 29 31295 - 31633 345 112 aa, chain - ## HITS:1 COG:no KEGG:SSON_3577 NR:ns ## KEGG: SSON_3577 # Name: hdeB # Def: acid-resistance protein # Organism: S.sonnei # Pathway: not_defined # 1 112 1 112 112 216 100.0 1e-55 MGYKMNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWW MLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQASNDLPN >gi|299857025|gb|ADWS01000039.1| GENE 30 31737 - 32069 481 110 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3953 NR:ns ## KEGG: EC55989_3953 # Name: hdeA # Def: acid-resistance protein # Organism: E.coli_55989 # Pathway: not_defined # 19 110 19 110 110 157 100.0 7e-38 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM >gi|299857025|gb|ADWS01000039.1| GENE 31 32324 - 32896 513 190 aa, chain + ## HITS:1 COG:ECs4391 KEGG:ns NR:ns ## COG: ECs4391 COG3247 # Protein_GI_number: 15833645 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 293 100.0 1e-79 MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFVSGDILSTVVGALLICS GIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPELGIFAIAAFIAGLFCVAGV IRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVSVTLVSTLVGIELIFSAASLF SFASLFVKQQ >gi|299857025|gb|ADWS01000039.1| GENE 32 33695 - 34222 380 175 aa, chain + ## HITS:1 COG:ECs4392 KEGG:ns NR:ns ## COG: ECs4392 COG2771 # Protein_GI_number: 15833646 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 175 1 175 175 302 100.0 2e-82 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF >gi|299857025|gb|ADWS01000039.1| GENE 33 34561 - 35718 1087 385 aa, chain + ## HITS:1 COG:yhiU KEGG:ns NR:ns ## COG: yhiU COG0845 # Protein_GI_number: 16131385 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 1 385 1 385 385 687 100.0 0 MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPGSVNVLSELPGRTVPYE VAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKALSTASNARI TFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAVEQATINLQYANVTSPITGVS GKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQDFLRMKEEVASGQIKQVQGSTPV QLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIFPNPNGDLLPGMYVTALVDEGSRQN VLLVPQEGVTHNAQGKATALILDKDDVVQLREIEASKAIGDQWVVTSGLQAGDRVIVSGL QRIRPGIKARAISSSQENASTESKQ >gi|299857025|gb|ADWS01000039.1| GENE 34 35743 - 38856 3043 1037 aa, chain + ## HITS:1 COG:ECs4394 KEGG:ns NR:ns ## COG: ECs4394 COG0841 # Protein_GI_number: 15833648 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 1037 1 1037 1037 1895 99.0 0 MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTITVSATYPGADAQTVEDS VTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDIAQVQVQNKLQLAMPSLPE AVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVASNIKDPLSRTAGVGSVQLFGS EYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQLGGMPQAADQQLNASIIVQTRL QTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYSTVARYNGKPAAGIAIKLATGANAL DTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIEISIQEVFKTLVEAIILVFLVMYLFLQ NFRATIIPTIAVPVVILGTFAILSAVGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVI AEDKLPPKEATHKSMGQIQRALVGIAVVLSAVFMPMAFMSGATGEIYRQFSITLISSMLL SVFVAMSLTPALCATILKAAPEGGHKPNALFARFNTLFEKSTQHYTDSTRSLLRCTGRYM VVYLLICAGMAVLFLRTPTSFLPEEDQGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKE KDNVQSVFTVGGFGFSGQGQNNGLAFISLKPWSERVGEENSVTAIIQRAMIALSSINKAV VFPFNLPAVAELGTASGFDMELLDNGNLGHEKLTQARNELLSLAAQSPDQVTGVRPNGLE DTPMFKVNVNAAKAEAMGVALSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRML PDNINQWYVRNASGTMAPLSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMK FMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVM LVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVKMMQKEGKTPIE AIIEAARMRLRPILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFV PVFFVVVEHLFARFKKA >gi|299857025|gb|ADWS01000039.1| GENE 35 38793 - 39074 147 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293412945|ref|ZP_06655613.1| ## NR: gi|293412945|ref|ZP_06655613.1| predicted protein [Escherichia coli B354] # 1 84 1 84 93 143 100.0 3e-33 MFGIIKLTIHTITGMWVSIVLFKLMTNGWSGFYFQCCVLSLVFLTVSWLLSGEWLAGKSK AEPSRSTLLSFTRYAFLKRAKRCSTTTKKTGTK >gi|299857025|gb|ADWS01000039.1| GENE 36 39219 - 39947 213 242 aa, chain - ## HITS:1 COG:ECs4395 KEGG:ns NR:ns ## COG: ECs4395 COG2207 # Protein_GI_number: 15833649 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 242 1 242 242 469 99.0 1e-132 MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFCSPDTRRLDIDELTVCH YLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMF SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGT FS >gi|299857025|gb|ADWS01000039.1| GENE 37 40315 - 41079 33 254 aa, chain - ## HITS:1 COG:ECs4396 KEGG:ns NR:ns ## COG: ECs4396 COG2207 # Protein_GI_number: 15833650 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 254 21 274 274 499 98.0 1e-141 MVNGEYRYFNGGDLVFADASQIRVDKCVENFVLVSRDTLSLFLPMLKEEALNLHAHKKIS SLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQ PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQGLPNRDSAASIVAQG NFYGTDRSAEGIRL >gi|299857025|gb|ADWS01000039.1| GENE 38 41509 - 42366 1146 285 aa, chain - ## HITS:1 COG:ECs2098 KEGG:ns NR:ns ## COG: ECs2098 COG0076 # Protein_GI_number: 15831352 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Escherichia coli O157:H7 # 1 285 182 466 466 612 100.0 1e-175 MRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMH IDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVF NVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLG PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVM RIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT Prediction of potential genes in microbial genomes Time: Sun May 15 22:45:21 2011 Seq name: gi|299857024|gb|ADWS01000040.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont39.1, whole genome shotgun sequence Length of sequence - 40409 bp Number of predicted genes - 37, with homology - 37 Number of transcription units - 18, operones - 10 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 303 - 362 2.9 1 1 Op 1 4/0.333 + CDS 385 - 993 648 ## COG0625 Glutathione S-transferase 2 1 Op 2 7/0.000 + CDS 1091 - 2482 1303 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 3 1 Op 3 2/0.889 + CDS 2479 - 4323 1837 ## COG3276 Selenocysteine-specific translation elongation factor + Term 4374 - 4433 13.1 + Prom 4383 - 4442 10.1 4 2 Op 1 6/0.000 + CDS 4513 - 5664 1334 ## COG1454 Alcohol dehydrogenase, class IV + Term 5680 - 5714 5.1 + Prom 5685 - 5744 2.3 5 2 Op 2 . + CDS 5829 - 7367 1774 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 7376 - 7430 -0.3 - Term 7478 - 7529 -0.6 6 3 Tu 1 . - CDS 7586 - 7789 117 ## EC55989_4045 conserved hypothetical protein, putative membrane protein - Prom 7813 - 7872 6.5 + Prom 7820 - 7879 8.7 7 4 Op 1 . + CDS 7912 - 8235 317 ## EcSMS35_3913 hypothetical protein 8 4 Op 2 . + CDS 8241 - 9377 957 ## COG1566 Multidrug resistance efflux pump + Term 9427 - 9461 -0.7 9 5 Tu 1 . - CDS 9374 - 10348 578 ## COG0583 Transcriptional regulator - Prom 10371 - 10430 10.5 + Prom 10320 - 10379 8.9 10 6 Tu 1 . + CDS 10472 - 11212 703 ## COG3713 Outer membrane protein V 11 7 Op 1 8/0.000 - CDS 11559 - 12254 534 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 12 7 Op 2 9/0.000 - CDS 12248 - 13108 858 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 13 7 Op 3 3/0.778 - CDS 13208 - 13762 627 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 14 7 Op 4 3/0.778 - CDS 13759 - 15255 1370 ## COG1070 Sugar (pentulose and hexulose) kinases 15 7 Op 5 . - CDS 15259 - 15582 367 ## COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component 16 7 Op 6 9/0.000 - CDS 15561 - 16244 259 ## PROTEIN SUPPORTED gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 17 7 Op 7 11/0.000 - CDS 16257 - 17537 754 ## PROTEIN SUPPORTED gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 18 7 Op 8 2/0.889 - CDS 17537 - 18010 271 ## COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - Prom 18053 - 18112 1.5 - Term 18080 - 18118 -0.7 19 8 Op 1 3/0.778 - CDS 18128 - 18595 476 ## COG2731 Beta-galactosidase, beta subunit 20 8 Op 2 . - CDS 18607 - 19605 1045 ## COG2055 Malate/L-lactate dehydrogenases - Prom 19666 - 19725 4.5 + Prom 19596 - 19655 6.0 21 9 Op 1 . + CDS 19806 - 20654 659 ## COG1414 Transcriptional regulator 22 9 Op 2 . + CDS 20756 - 21229 166 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 + Term 21232 - 21277 8.2 23 10 Tu 1 . - CDS 21380 - 22633 1260 ## COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase - Prom 22664 - 22723 2.4 24 11 Tu 1 . - CDS 22811 - 24841 1565 ## COG0366 Glycosidases - Prom 25082 - 25141 5.6 25 12 Tu 1 . + CDS 25413 - 25985 524 ## COG2992 Uncharacterized FlgJ-related protein + Term 26000 - 26041 7.2 26 13 Tu 1 4/0.333 - CDS 26093 - 27271 1013 ## COG1609 Transcriptional regulators - Term 27287 - 27332 8.0 27 14 Op 1 11/0.000 - CDS 27349 - 28530 979 ## COG4214 ABC-type xylose transport system, permease component 28 14 Op 2 11/0.000 - CDS 28508 - 30049 231 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Term 30082 - 30124 7.1 29 14 Op 3 . - CDS 30127 - 31119 964 ## COG4213 ABC-type xylose transport system, periplasmic component - Prom 31338 - 31397 6.9 + Prom 31329 - 31388 4.7 30 15 Op 1 11/0.000 + CDS 31485 - 32807 1461 ## COG2115 Xylose isomerase + Term 32809 - 32846 -0.3 31 15 Op 2 3/0.778 + CDS 32879 - 34333 879 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 34336 - 34384 1.1 + Prom 34366 - 34425 5.8 32 16 Op 1 1/1.000 + CDS 34502 - 34843 338 ## COG4682 Predicted membrane protein 33 16 Op 2 . + CDS 34889 - 35326 489 ## COG4682 Predicted membrane protein 34 17 Tu 1 . - CDS 35368 - 36363 676 ## COG3274 Uncharacterized protein conserved in bacteria - Prom 36495 - 36554 3.8 + Prom 36428 - 36487 4.5 35 18 Op 1 . + CDS 36541 - 36837 317 ## ECO103_4674 putative outer membrane lipoprotein + Prom 36841 - 36900 3.4 36 18 Op 2 19/0.000 + CDS 36932 - 37843 1142 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 37 18 Op 3 . + CDS 37853 - 39922 2870 ## COG0751 Glycyl-tRNA synthetase, beta subunit + Term 39935 - 39978 4.9 Predicted protein(s) >gi|299857024|gb|ADWS01000040.1| GENE 1 385 - 993 648 202 aa, chain + ## HITS:1 COG:yibF KEGG:ns NR:ns ## COG: yibF COG0625 # Protein_GI_number: 16131463 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 202 1 202 202 401 100.0 1e-112 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECW FDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSE DELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPH LVKLVENLFSRESFARTEPPKA >gi|299857024|gb|ADWS01000040.1| GENE 2 1091 - 2482 1303 463 aa, chain + ## HITS:1 COG:ECs4468 KEGG:ns NR:ns ## COG: ECs4468 COG1921 # Protein_GI_number: 15833722 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 843 100.0 0 MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQMLDEAREVIRGSQTLPAW CENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAEAAVEAVAQAMRSPVTLEY DLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEI GGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNENTALLMKVHTSNYSIQGFTKAID EAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEPMPQELIAAGVSLVSFSGDKLLGGP QAGIIVGKKEMIARLQSHPLKRALRADKMTLAALEATLRLYLHPEALSEKLPTLRLLTRS AEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLSQIGSGSLPVDRLPSAALTFTPHDGRGSH LESLAARWRELPVPVIGRIYDGRLWLDLRCLEDEQRFLEMLLK >gi|299857024|gb|ADWS01000040.1| GENE 3 2479 - 4323 1837 614 aa, chain + ## HITS:1 COG:selB KEGG:ns NR:ns ## COG: selB COG3276 # Protein_GI_number: 16131461 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Escherichia coli K12 # 1 614 1 614 614 1211 99.0 0 MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPG HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEA RVNEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREHLLQLPEREHASQHSFRLAID RAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETANAGQRIALN IAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLL EDNLAKLVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLA RAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQ RKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDILSHHGWLHL PDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIV KDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRG NDHLLRDALLFPEK >gi|299857024|gb|ADWS01000040.1| GENE 4 4513 - 5664 1334 383 aa, chain + ## HITS:1 COG:ECs4466 KEGG:ns NR:ns ## COG: ECs4466 COG1454 # Protein_GI_number: 15833720 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 383 1 383 383 707 99.0 0 MASSTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDSMLTKLGMAGDVQKALEERNI FSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHDCAKGIALVAANGGDIRDY EGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIKMAIVDKHVTPLLSVNDSSLM IGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALKAVTMIAENLPLAVEDGSNAKAR EAMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYNLPHGVCNAVLLPHVQVFNSKVAAARL RDCAAAMGVNVTGKNDAEGAEACINAIRELAKKVDIPAGLRDLNVKEEDFAVLATNALKD ACGFTNPIQATHEEIVAIYRAAM >gi|299857024|gb|ADWS01000040.1| GENE 5 5829 - 7367 1774 512 aa, chain + ## HITS:1 COG:aldB KEGG:ns NR:ns ## COG: aldB COG1012 # Protein_GI_number: 16131459 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 512 31 542 542 1071 99.0 0 MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQNLTPVTGQLLCEVASSG KRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETS AADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEPLGVVGQIIPWNFPLLMASWK MAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGVVNVVNGAGGEIGEYLATSKRIA KVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFA FNQGEVCTCPSRALVQESIYERFMERAIRRVESIRSGNPLDSVTQMGAQVSHGQLETILN YIDIGKKEGADVLTGGRRKLLEGELKDGYYLEPTILFGQNNMRVFQEEIFGPVLAVTTFK TMEEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQS GIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF >gi|299857024|gb|ADWS01000040.1| GENE 6 7586 - 7789 117 67 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4045 NR:ns ## KEGG: EC55989_4045 # Name: not_defined # Def: conserved hypothetical protein, putative membrane protein # Organism: E.coli_55989 # Pathway: not_defined # 1 67 4 70 70 109 98.0 3e-23 MAFQQVEVYHIEIMELLTKLMNNSSKTSTVQIKRIKPSIIYRLLLIGLGTPMVIYGLVCP LTIETRE >gi|299857024|gb|ADWS01000040.1| GENE 7 7912 - 8235 317 107 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_3913 NR:ns ## KEGG: EcSMS35_3913 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 107 1 107 107 201 100.0 1e-50 MFLDYFALGVLIFVFLVIFYGIIILHDIPYLIAKKRNHPHADAIHVAGWVSLFTLHVIWP FLWIWATLYRPERGWGMQNHDSSVVQLQQRIAGLEKQLADIKSSSAE >gi|299857024|gb|ADWS01000040.1| GENE 8 8241 - 9377 957 378 aa, chain + ## HITS:1 COG:yiaV KEGG:ns NR:ns ## COG: yiaV COG1566 # Protein_GI_number: 16131457 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 378 1 378 378 726 99.0 0 MDLLIILTYVAFAWAMFKIFKIPVNKWTIPTAALGGIFIVSGLILLMNYNHPYTFKAQKA VISIPVVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRAL GAELDEMAANTQQAKATRDKFAKEYKRYARGSQAKVNPFSERDIDVARQNYLAQEASVKS SAAEQKQIQSQLDSLVLGEHSQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIRPGTY AASLPLRPVMVFIPDQKRQIVAQFRQNSLLRLAPGDDAEVVFNALPGKVFSGKLAAISPA VPGGAYQSTGTLQTLNTAPGSDGVIATIELDEHTDLSALPDGIYAQVAVYSDHFSHVSVM RKVLLRMTSWVHYLYLDH >gi|299857024|gb|ADWS01000040.1| GENE 9 9374 - 10348 578 324 aa, chain - ## HITS:1 COG:yiaU KEGG:ns NR:ns ## COG: yiaU COG0583 # Protein_GI_number: 16131456 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 324 1 324 324 661 100.0 0 MTKLQLKYRELKIISVIAASENISHAATVLGIAQANVSKYLADFESKVGLKVFDRTTRQL MLTPFGTALLPYINDMLDRNEQLNNFIADYKHEKRGRVTIYAPTGIITYLSKHVIDKIKD IGDITLSLKTCNLERNAFYEGVEFPDDCDVLISYAPPKDESLVASFITQYAVTAYASQRY LEKHPISRPDELEHHSCILIDSMMIDDANIWRFNVAGSKEVRDYRVKGNYVCDNTQSALE LARNHLGIVFAPDKSVQSDLQDGTLVPCFQQPYEWWLDLVAIFRKREYQPWRVQYVLDEM LREIRHQLAQSQQLRPEQAAESED >gi|299857024|gb|ADWS01000040.1| GENE 10 10472 - 11212 703 246 aa, chain + ## HITS:1 COG:ECs4460 KEGG:ns NR:ns ## COG: ECs4460 COG3713 # Protein_GI_number: 15833714 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 470 99.0 1e-132 MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDSFYVR QTTLGFILSQSEKNELSLTASWMPLEFDPADNDDYAMQQLDKRDSTAMAGVAWYHHERWG TVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESR RSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITNSPMIDRNESFTFIT GVSWRF >gi|299857024|gb|ADWS01000040.1| GENE 11 11559 - 12254 534 231 aa, chain - ## HITS:1 COG:sgbE KEGG:ns NR:ns ## COG: sgbE COG0235 # Protein_GI_number: 16131454 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 231 1 231 231 464 100.0 1e-131 MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDETRQWMVIKPSGVEYDVMTADDMVVVE IASGKVVEGSKKPSSDTPTHLALYRRYAEIGGIVHTHSRHATIWSQAGLDLPAWGTTHAD YFYGAIPCTRQMTAEEINGEYEYQTGEVIIETFEERGRSPAQIPAVLVHSHGPFAWGKNA ADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKHYLRKHGANAYYGQ >gi|299857024|gb|ADWS01000040.1| GENE 12 12248 - 13108 858 286 aa, chain - ## HITS:1 COG:sgbU KEGG:ns NR:ns ## COG: sgbU COG3623 # Protein_GI_number: 16131453 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli K12 # 1 286 12 297 297 570 97.0 1e-162 MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSTAQRTSLVA AMIETGVGIPSMCLSAHRRFPFGSRDDAVRQRAREIMSKAIRLARDLGIRTIQLAGYDVY YEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWKKWDEMLASPWFTV YPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTEQSPGQFRDVPFGEGCVDFVGIF KTLHKLNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC >gi|299857024|gb|ADWS01000040.1| GENE 13 13208 - 13762 627 184 aa, chain - ## HITS:1 COG:sgbH KEGG:ns NR:ns ## COG: sgbH COG0269 # Protein_GI_number: 16131452 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Escherichia coli K12 # 1 173 1 173 220 325 99.0 2e-89 MSRPLLQLALDHSSLEAAQRDVTQLKDSVDIVEAGTILCLNEGLGAVKALREQCPDKIIV ADWKVADAGETLAQQAFGAGANWMTIICAAPLATVEKGHAMAQRCGGEIQIELFGNWTLD DARDWHRIGVRQAIYHRGRDAQASGQQWGEADLARMKALSDIGLELSITGGITLLTCRCL KIFA >gi|299857024|gb|ADWS01000040.1| GENE 14 13759 - 15255 1370 498 aa, chain - ## HITS:1 COG:lyxK KEGG:ns NR:ns ## COG: lyxK COG1070 # Protein_GI_number: 16131451 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 498 1 498 498 1027 98.0 0 MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIR ELLTHSGVSGEQIVGIGISAQGKGLFLLDKNNKPLGNAILSSDRRAMEIVRRWQEDGIPE KLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTHDYLRWCLTGVKGCEESNISE SNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAVLTGLKAGTPVVGG LFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGLRDGEAHPYVYGRYVNDGEFIVHEA SPTSSGNLEWFTAQWGEISFDEINQAVASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQ AIHTRAHLLQAIYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAHSDVWMQMLADVSGLR IELPQVEETGCFGAALAARVGTGVYRDFSEAQRDLQHPVRTLLPDMTAHQLYQQKYQRYQ HLIAALQGFHARIKEHIL >gi|299857024|gb|ADWS01000040.1| GENE 15 15259 - 15582 367 107 aa, chain - ## HITS:1 COG:yiaO KEGG:ns NR:ns ## COG: yiaO COG1638 # Protein_GI_number: 16131450 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 107 222 328 328 201 96.0 2e-52 MQKYLSLTHHAYSPLLVVINKAKFDGLSPEFQQALISSAQEAGNYQRKLVAEDQQKIIDG MKEAGVEVITDLDRKAFSDALGTQVRDMFVKDVPQGADLLKAVDEVQ >gi|299857024|gb|ADWS01000040.1| GENE 16 15561 - 16244 259 227 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 [Lentisphaera araneosa HTCC2155] # 27 209 49 231 346 104 28 1e-21 MKLRSVTYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELK LKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTL DGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAF KVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFSKCRSTFL >gi|299857024|gb|ADWS01000040.1| GENE 17 16257 - 17537 754 426 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 [Algoriphagus sp. PR1] # 1 419 3 423 431 295 36 4e-79 IMAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMAQTLVNGADSFSLLAI PFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAMIMASLSGSAVADTAAVA ALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGM MMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIWALFLPVIIIGGFRSGLFTPTE AGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTSVVMFLVASAQVSAWLITIAELPM MVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTPTVLILTPVLMPLVKEAGIDPIYFGV MFIINCSIGLITPPIGNVLNVISGVAKLKFDDAVRGVFPYVLVLYSLLVVFVFIPDLIIL PLKWIN >gi|299857024|gb|ADWS01000040.1| GENE 18 17537 - 18010 271 157 aa, chain - ## HITS:1 COG:yiaM KEGG:ns NR:ns ## COG: yiaM COG3090 # Protein_GI_number: 16131448 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, small permease component # Organism: Escherichia coli K12 # 1 157 1 157 157 282 99.0 2e-76 MKKILEAILAINLAVLSCIVFINIILRYGFQTSILSVDELSRCLFVWLTFIGAIVAFMDN AHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLKTIQDWSDYSPILGLPIGL MYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA >gi|299857024|gb|ADWS01000040.1| GENE 19 18128 - 18595 476 155 aa, chain - ## HITS:1 COG:yiaL KEGG:ns NR:ns ## COG: yiaL COG2731 # Protein_GI_number: 16131447 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli K12 # 1 155 1 155 155 307 97.0 4e-84 MIFGHIAQPNPCRLPAAIEKALDFLRATDFNALEPGVVEIDGKNIYAQIIDLTTREAVEN RPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGS YAIFFPQDVHRPGCILQTASEIRKIVVKVALTALN >gi|299857024|gb|ADWS01000040.1| GENE 20 18607 - 19605 1045 332 aa, chain - ## HITS:1 COG:yiaK KEGG:ns NR:ns ## COG: yiaK COG2055 # Protein_GI_number: 16131446 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 1 332 1 332 332 672 99.0 0 MKVTFEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSHGVNRFPRFIQQLENGD IIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAADHGIGLVALRNANHWMRG GSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLIVAIPSTPITMVDMSMSMFSY GMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRILPMGYWKGSGMSIVLDMIATLL SDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPTRDAKLQRIMDYVTTAERADENQAI RLPGHEFTTLLAENRRNGITVDDSVWAKIQAL >gi|299857024|gb|ADWS01000040.1| GENE 21 19806 - 20654 659 282 aa, chain + ## HITS:1 COG:yiaJ KEGG:ns NR:ns ## COG: yiaJ COG1414 # Protein_GI_number: 16131445 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 282 1 282 282 560 98.0 1e-160 MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVH RLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIHIAAPHLEALNIATGETIN FSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGHPDYVKSYWENHQ HEIQPLTRNTITELPAMFDELAHIRESGAAMDREENELGVSCIAVPVFNIHGRVPYAVSI SLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRDDQGAIT >gi|299857024|gb|ADWS01000040.1| GENE 22 20756 - 21229 166 157 aa, chain + ## HITS:1 COG:ECs4456 KEGG:ns NR:ns ## COG: ECs4456 COG1142 # Protein_GI_number: 15833710 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 261 100.0 3e-70 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDL CWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV >gi|299857024|gb|ADWS01000040.1| GENE 23 21380 - 22633 1260 417 aa, chain - ## HITS:1 COG:ECs4455 KEGG:ns NR:ns ## COG: ECs4455 COG3977 # Protein_GI_number: 15833709 # Func_class: E Amino acid transport and metabolism # Function: Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase # Organism: Escherichia coli O157:H7 # 1 417 1 417 417 875 100.0 0 MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLES GKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEAQNIALTNGSQSAFFYLFNLFAGR RADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEET GMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPN IVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLR LSETVIKPFYYQRVQETIAIIRRYLPEDRCLIHKPEGAIFLWLWFKDLPITTEQLYQRLK ARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEAGVKILAEEIERAWAESH >gi|299857024|gb|ADWS01000040.1| GENE 24 22811 - 24841 1565 676 aa, chain - ## HITS:1 COG:ECs4454 KEGG:ns NR:ns ## COG: ECs4454 COG0366 # Protein_GI_number: 15833708 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 676 1 676 676 1361 99.0 0 MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPKGTRPLTLNFDQQCWQP ADAIKLNQMLSLQPCSNTPPQWRLFRDGKYTLQIDTRSGTPTLMISIQNAAEPVANLVRE CPKWDGLPLTLDVSATFPEGAAVRDYYSQQIAIVKNGQITLQPAATSNGLLLLERAETDA PAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQ LGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSA HQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKTLGERWSDWKPAAGQTWHS FNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVF YKNKTDTHAKVIEGFTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAA LREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQ MDTTWQQMAEKLQGFNVLSYLSSHDTRLFREGGDKAAELLLLAPGAVQIFYGDESSRPFG PTGSDPLQGTRSDMNWQDVSGKSAANVAHWQKISQFRARHPAIGAGKQTTLSLKQGYGFV REHGDDKVLVIWAGQQ >gi|299857024|gb|ADWS01000040.1| GENE 25 25413 - 25985 524 190 aa, chain + ## HITS:1 COG:ECs4453 KEGG:ns NR:ns ## COG: ECs4453 COG2992 # Protein_GI_number: 15833707 # Func_class: R General function prediction only # Function: Uncharacterized FlgJ-related protein # Organism: Escherichia coli O157:H7 # 1 190 85 274 274 348 100.0 4e-96 MPYITSQNAAITAERNWLISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLE RVDIIPTSMVATMAAAESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKE SVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQ DNQRLIAAHM >gi|299857024|gb|ADWS01000040.1| GENE 26 26093 - 27271 1013 392 aa, chain - ## HITS:1 COG:xylR_1 KEGG:ns NR:ns ## COG: xylR_1 COG1609 # Protein_GI_number: 16131440 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 265 1 265 265 542 100.0 1e-154 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML >gi|299857024|gb|ADWS01000040.1| GENE 27 27349 - 28530 979 393 aa, chain - ## HITS:1 COG:ECs4451 KEGG:ns NR:ns ## COG: ECs4451 COG4214 # Protein_GI_number: 15833705 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, permease component # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 596 100.0 1e-170 MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFTWTTDGAYLSARNVSNL LRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICDVWLGWPLPLTIIVTLVLG LLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSAAMSQIGQSYLPAS TGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVVGRQALTAIIVLGAIWLLNDYRG VPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMV AIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNG MSMMDVPTFWQYIVKGAILLLAVWMDSATKRRS >gi|299857024|gb|ADWS01000040.1| GENE 28 28508 - 30049 231 513 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 254 483 7 240 329 93 29 2e-18 MPYLLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYE GEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLGNEITHNGIMDYDLMT LRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETSV LLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDDIITMMVG RELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKRVNDVSFSLKRGEILGIAGLVGAGR TETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQAIAQGIAMVPEDRKRDGIVPVMAVGKN ITLAALNKFTGGISQLDDAAEQKCILESIQQLKVKTSSPDLAIGRLSGGNQQKAILARCL LLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMHE GKLKANLINHNLTQEQVMEAALRSEHHVEKQSV >gi|299857024|gb|ADWS01000040.1| GENE 29 30127 - 31119 964 330 aa, chain - ## HITS:1 COG:xylF KEGG:ns NR:ns ## COG: xylF COG4213 # Protein_GI_number: 16131437 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, periplasmic component # Organism: Escherichia coli K12 # 1 330 1 330 330 578 99.0 1e-165 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV PSRLLTPIDVNKNNIKDTVVKDGFHKESEL >gi|299857024|gb|ADWS01000040.1| GENE 30 31485 - 32807 1461 440 aa, chain + ## HITS:1 COG:ECs4448 KEGG:ns NR:ns ## COG: ECs4448 COG2115 # Protein_GI_number: 15833702 # Func_class: G Carbohydrate transport and metabolism # Function: Xylose isomerase # Organism: Escherichia coli O157:H7 # 1 440 1 440 440 901 99.0 0 MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMF GVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFA QMVDVLAAKQEESGVKLLWGTANCFTNPRYGAGAATNPDPEVFSWAATQVVTAMEATHKL GGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK HQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRG DAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAM DTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHNLSPV HQSGRQEQLENLVNHYLFDK >gi|299857024|gb|ADWS01000040.1| GENE 31 32879 - 34333 879 484 aa, chain + ## HITS:1 COG:xylB KEGG:ns NR:ns ## COG: xylB COG1070 # Protein_GI_number: 16131435 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 484 1 484 484 921 99.0 0 MYIGIDLGTSGVKVILLNEQGEVVASQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALG DQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITG NLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVA KRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVG VGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDW VAKLTGLCNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNE LARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGG DVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLL PLMA >gi|299857024|gb|ADWS01000040.1| GENE 32 34502 - 34843 338 113 aa, chain + ## HITS:1 COG:ECs4446 KEGG:ns NR:ns ## COG: ECs4446 COG4682 # Protein_GI_number: 15833700 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 113 5 117 117 190 100.0 7e-49 MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLD NFFTHICQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSV >gi|299857024|gb|ADWS01000040.1| GENE 33 34889 - 35326 489 145 aa, chain + ## HITS:1 COG:ECs4445 KEGG:ns NR:ns ## COG: ECs4445 COG4682 # Protein_GI_number: 15833699 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 145 2 146 146 268 100.0 2e-72 MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQK TVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVA VQKNIRDAGINPPKETQVTQEEYSE >gi|299857024|gb|ADWS01000040.1| GENE 34 35368 - 36363 676 331 aa, chain - ## HITS:1 COG:yiaH KEGG:ns NR:ns ## COG: yiaH COG3274 # Protein_GI_number: 16131432 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 331 1 331 331 605 99.0 1e-173 MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMI SGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWF FFAIAVIYLVSPLIQVKNVGGKMLLVLMVVIGIIANPNTVPQKIDGFEWLPINLYINGDT FYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPI LDIIWIFCATLAASLLLSMLVQRIDRNRLVS >gi|299857024|gb|ADWS01000040.1| GENE 35 36541 - 36837 317 98 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4674 NR:ns ## KEGG: ECO103_4674 # Name: ysaB # Def: putative outer membrane lipoprotein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 98 2 99 99 194 100.0 1e-48 MMNAFFPAMALMVLVGCSTPSPVQKAQRVKVDPLRSLNMEALCKDQAAKRYNTGEQKIDV TAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR >gi|299857024|gb|ADWS01000040.1| GENE 36 36932 - 37843 1142 303 aa, chain + ## HITS:1 COG:ECs4443 KEGG:ns NR:ns ## COG: ECs4443 COG0752 # Protein_GI_number: 15833697 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 303 1 303 303 634 100.0 0 MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMAAAYVQ PSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDN WENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSV YDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPL PLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCN KDK >gi|299857024|gb|ADWS01000040.1| GENE 37 37853 - 39922 2870 689 aa, chain + ## HITS:1 COG:ECs4442 KEGG:ns NR:ns ## COG: ECs4442 COG0751 # Protein_GI_number: 15833696 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Escherichia coli O157:H7 # 1 689 1 689 689 1321 99.0 0 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRA HVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGI QSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGN ADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPN FIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGT LRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHD GEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFAL RRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEG YTVDTIQAVLARRPTRPADFDARMKAVSHFRTLEAAAALAAANKRVSNILAKSDEVLSDR VNASTLKEPEEIKLAMQVVVLRDKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVD DKELRLNRLTMLEKLRELFLRVADISLLQ Prediction of potential genes in microbial genomes Time: Sun May 15 22:45:40 2011 Seq name: gi|299857023|gb|ADWS01000041.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont40.1, whole genome shotgun sequence Length of sequence - 38858 bp Number of predicted genes - 37, with homology - 35 Number of transcription units - 23, operones - 9 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 233 142 ## COG2963 Transposase and inactivated derivatives - Prom 253 - 312 2.2 - Term 398 - 437 4.4 2 2 Tu 1 . - CDS 472 - 1440 517 ## EcE24377A_3406 hypothetical protein - Term 1502 - 1538 -0.7 3 3 Tu 1 . - CDS 1544 - 2233 493 ## COG2378 Predicted transcriptional regulator - Prom 2270 - 2329 2.1 4 4 Tu 1 . - CDS 2425 - 3318 190 ## COG3596 Predicted GTPase - Prom 3415 - 3474 3.1 - Term 3436 - 3474 4.5 5 5 Tu 1 . - CDS 3503 - 3760 89 ## - Prom 3883 - 3942 3.9 + Prom 6175 - 6234 4.8 6 6 Tu 1 . + CDS 6448 - 6618 87 ## + Term 6634 - 6671 0.1 - Term 7409 - 7453 5.7 7 7 Op 1 . - CDS 7518 - 8546 148 ## Pput_0413 hypothetical protein 8 7 Op 2 . - CDS 8550 - 9092 517 ## PROTEIN SUPPORTED gi|27363861|ref|NP_759389.1| ribosomal protein L22 9 7 Op 3 . - CDS 9093 - 9551 284 ## VV1_0392 HD superfamily hydrolase - Prom 9579 - 9638 4.2 - Term 9691 - 9732 -1.0 10 8 Tu 1 . - CDS 9965 - 11164 377 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 - Prom 11235 - 11294 2.0 - TRNA 11332 - 11422 75.2 # SeC(p) TCA 0 0 + Prom 11515 - 11574 8.2 11 9 Op 1 3/0.500 + CDS 11715 - 13097 1311 ## COG2211 Na+/melibiose symporter and related transporters 12 9 Op 2 1/0.875 + CDS 13107 - 13907 767 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Term 13981 - 14019 0.1 13 10 Tu 1 . + CDS 14034 - 15425 1258 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Term 15438 - 15481 6.4 - Term 15427 - 15465 7.5 14 11 Op 1 . - CDS 15477 - 17186 1443 ## LF82_3356 uncharacterized protein yich - Prom 17212 - 17271 1.9 15 11 Op 2 . - CDS 17307 - 18698 1641 ## COG2233 Xanthine/uracil permeases - Prom 18722 - 18781 4.8 + Prom 18787 - 18846 7.0 16 12 Op 1 . + CDS 18978 - 20183 1373 ## COG0786 Na+/glutamate symporter 17 12 Op 2 . + CDS 20186 - 21052 638 ## B21_03462 hypothetical protein + Term 21301 - 21332 1.6 18 13 Op 1 4/0.375 - CDS 21037 - 23118 2117 ## COG1200 RecG-like helicase 19 13 Op 2 5/0.375 - CDS 23124 - 23813 608 ## COG0566 rRNA methylases 20 13 Op 3 18/0.000 - CDS 23820 - 25928 2041 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 21 13 Op 4 25/0.000 - CDS 25947 - 26222 496 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 22 13 Op 5 . - CDS 26277 - 26900 543 ## COG0194 Guanylate kinase - Prom 26941 - 27000 4.6 + Prom 26901 - 26960 2.0 23 14 Tu 1 . + CDS 27158 - 28840 955 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) - Term 28780 - 28817 5.3 24 15 Tu 1 . - CDS 28837 - 29454 862 ## COG2860 Predicted membrane protein - Prom 29621 - 29680 4.9 25 16 Tu 1 . - CDS 29746 - 30570 363 ## EC55989_4110 DNA-damage-inducible protein D - Prom 30630 - 30689 3.9 26 17 Tu 1 . - CDS 30791 - 31654 1168 ## COG1561 Uncharacterized stress-induced protein - Prom 31682 - 31741 5.5 + Prom 31692 - 31751 4.8 27 18 Op 1 6/0.250 + CDS 31781 - 32497 828 ## COG0689 RNase PH + Term 32505 - 32534 2.1 28 18 Op 2 . + CDS 32563 - 33204 846 ## COG0461 Orotate phosphoribosyltransferase + Term 33212 - 33249 7.8 - Term 33200 - 33235 7.4 29 19 Tu 1 . - CDS 33241 - 33837 699 ## COG1309 Transcriptional regulator - Term 33838 - 33873 -0.5 30 20 Op 1 5/0.375 - CDS 33944 - 34402 577 ## COG0756 dUTPase 31 20 Op 2 . - CDS 34380 - 35600 1137 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase - Prom 35631 - 35690 2.2 + Prom 35517 - 35576 2.4 32 21 Op 1 7/0.000 + CDS 35772 - 36440 445 ## COG2003 DNA repair proteins + Prom 36458 - 36517 3.4 33 21 Op 2 16/0.000 + CDS 36657 - 36893 403 ## PROTEIN SUPPORTED gi|15804178|ref|NP_290217.1| 50S ribosomal protein L28 34 21 Op 3 5/0.375 + CDS 36914 - 37081 280 ## PROTEIN SUPPORTED gi|15804177|ref|NP_290216.1| 50S ribosomal protein L33 + Term 37099 - 37140 9.7 + Prom 37097 - 37156 2.2 35 22 Tu 1 . + CDS 37179 - 37988 801 ## COG0266 Formamidopyrimidine-DNA glycosylase - Term 37977 - 38026 4.2 36 23 Op 1 6/0.250 - CDS 38027 - 38506 393 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 37 23 Op 2 . - CDS 38514 - 38855 414 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase Predicted protein(s) >gi|299857023|gb|ADWS01000041.1| GENE 1 2 - 233 142 77 aa, chain - ## HITS:1 COG:ECs4535 KEGG:ns NR:ns ## COG: ECs4535 COG2963 # Protein_GI_number: 15833789 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 77 13 89 116 131 98.0 3e-31 MNKKTKRTFTPEFRLECAQLIVDKGYSYRQASEAMNVGSTTLESWVRQLRRERQGITPSA TPITPDQQRIRELEKQV >gi|299857023|gb|ADWS01000041.1| GENE 2 472 - 1440 517 322 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3406 NR:ns ## KEGG: EcE24377A_3406 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 179 45 214 260 76 28.0 1e-12 MLGASTFNASAAWQVSGTFCQSYTDDGRVLVRVRPATIGLIEQQPQCNGRGSTELAGSNF SVNGSSYPSSVMCNAQSNYQAVQTTTATKDIQNIISMLQDNQSVSINTFGSRSEVNTADF AQACSSIINQKVADFDPQKTYQQDMAKMGYKQDENGQWHKQSKQAYSREADPEIAANYDP KAGVAENSGKGGFYGDGANKNLYGPGSQAQKDAEAANEARRLAAQNRMSKSATGITEPEM QAALAAAKKAYAANYDQETLASADFGSYKQAPSVPDPADKTQKLRVVEYEVFNPGYKTYD KVRVTLNASGAVTGTQVQYEGQ >gi|299857023|gb|ADWS01000041.1| GENE 3 1544 - 2233 493 229 aa, chain - ## HITS:1 COG:yfjR KEGG:ns NR:ns ## COG: yfjR COG2378 # Protein_GI_number: 16130552 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli K12 # 3 227 1 225 233 148 41.0 8e-36 MSVNEQDSRYDRLAIRLSVIISRLLAGETLSLKSLVDEFGVSERTLQRDFNQRLIHLDIL DENGRYRLNDCHPPDHSSGAFSFIRTTGIARIIPVQDRQLMNLLMNESGTSPCLIWHAPL KSHVALPEFFSRLVQAISQKRQITVLVEGQRHEALEPYRLIHYVEEWYLVVCQSGKIRVF ALTSIGAVTLDEVRFKRREDISYLTAGEGFIAALPHFPLISDVIDTFRY >gi|299857023|gb|ADWS01000041.1| GENE 4 2425 - 3318 190 297 aa, chain - ## HITS:1 COG:ykfA KEGG:ns NR:ns ## COG: ykfA COG3596 # Protein_GI_number: 16128238 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 6 296 3 288 288 190 37.0 3e-48 MSKHSDSHDAVNAFQACLSFLPSSSTERILKQLKQSIDYEPVIGIMGKTGAGKSSLCNAL FQEQTCLTSELMACTREPQRLVLTVGERSITLVDLPGVGETPEFDAEYMALYHRLFVELD LVIWVLRADDRARAIDITTHRLLLSNGADPSRFLFVITQAECIPPLPTNSECQERPSPTQ CLSLATISAQIAGQFPSSYPVIAVSAHTGYNLTVLVELMVHALPIQASSAFYRQLKPEHL TKESNDAVRQRFGEMAGNAFDTVINPDSFPSGWTSFLRKLRQKLVQLATVLWDRVFG >gi|299857023|gb|ADWS01000041.1| GENE 5 3503 - 3760 89 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYLLLRRYLRLFFGSAIESPREIVDLYNSFFSLQVVDVGELGEIVSFSYFKGRQSKVNTF FIIPEYVLDTLPRSGDVFGIGSTLS >gi|299857023|gb|ADWS01000041.1| GENE 6 6448 - 6618 87 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDKLNYKVSARMLYLRYSQFIKNESKFIIRYYSILAQLPYTPEWDGDSYVYHKFLV >gi|299857023|gb|ADWS01000041.1| GENE 7 7518 - 8546 148 342 aa, chain - ## HITS:1 COG:no KEGG:Pput_0413 NR:ns ## KEGG: Pput_0413 # Name: not_defined # Def: hypothetical protein # Organism: P.putida_F1 # Pathway: not_defined # 4 337 6 350 355 257 42.0 4e-67 MKKFNYFPIMKTRDAELKAVSKLSSGIFDHILPIYELTKSRKAKIAPDGDIHRRMLTIKD IQGERPFILDLTSNEKYINDQIRQLVDEKDGYYEWRYFINLYNHLNIIPMIHIYDDEDFS EVQNFVSEITKTKKMLALRLPHDLDDYSIFIKPIADSLQDGSKFYVILDAGQVEGTTDRE EEYFLNACSDLEMFNDKIEDIIIACTSFPSSPIKYGHDDRGEIPILEEKIFNKVSESHHV KYGDYASINIEQIEMKGGTFVPRIDISLQEKFIYKRYRRDAGSYPLCAAMMVKDERYKPI GIWADHEISLAAKNTPSGISPSFWIAVRMNYFMSSRVLLRKS >gi|299857023|gb|ADWS01000041.1| GENE 8 8550 - 9092 517 180 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|27363861|ref|NP_759389.1| ribosomal protein L22 [Vibrio vulnificus CMCP6] # 1 180 1 180 180 203 58 1e-51 MAFMTKKLKSSGVISGQDIDMTTASELIVFAKKNNIETSPLDVSRLTNLLGITMRLEPMK GEESGSLKQGKSGNWVMTINSLHHPHRQRFTIAHELGHFIRHTLNRNSFTDTVFFRNEET NKMEAEANRFAAELLMPEIEFSKFIEEKSNQVADIAAHFQVSSMAVRIRAQQLGFSGHNL >gi|299857023|gb|ADWS01000041.1| GENE 9 9093 - 9551 284 152 aa, chain - ## HITS:1 COG:no KEGG:VV1_0392 NR:ns ## KEGG: VV1_0392 # Name: not_defined # Def: HD superfamily hydrolase # Organism: V.vulnificus # Pathway: not_defined # 1 151 72 218 220 84 35.0 2e-15 MVTDGTLLSLDDFWSFQSNLYQTIITVLIALNGIVAAFSFLIIKNSSTAKAKEEARDIAV VEVNQYVESSKFEKEIKRILYEKIEPVQFDLLAQISSIDEIKLSQQEHNQSFEKLEQELD GLKRNLKLIAESISLKDTSDEDGSDFILGRRS >gi|299857023|gb|ADWS01000041.1| GENE 10 9965 - 11164 377 399 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 10 389 14 403 406 149 28 2e-35 MKLTARQVDTAKPKEKPYKLSDGGGLYLEVATSGSRYWRLKYRYAGKEKRLAFGVYPEVS LAEARDKREAAKKVLAAGNDPGEVKKAEKIAQKLGFENTFEAIAREWHQVRADRWSLRYR EEIIDTFEKDVFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV TGRAEYNPAPDLATALATPKKTHFPFLTAEELPHFLKDLAGYTGSIITKTATQIIMLTGV RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVALFESLKPITGLYPLVFI GRNDRTKPISKESINQVIELLGYKGRVTGHGFRHTMSTILHEEGFDSAWIETQLAHVDKN AIRGAYNHAQYLDGRKEMMQWYASFITNLSIASVRNIAS >gi|299857023|gb|ADWS01000041.1| GENE 11 11715 - 13097 1311 460 aa, chain + ## HITS:1 COG:yicJ KEGG:ns NR:ns ## COG: yicJ COG2211 # Protein_GI_number: 16131528 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli K12 # 1 460 20 479 479 877 100.0 0 MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAI SDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLT LLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPL GFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFN ILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTN ALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTG ISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTIVPAICYLLS AIIAKRYYSLTTHNLKTVMEQLAQGKRRCQQQFTSQEVQN >gi|299857023|gb|ADWS01000041.1| GENE 12 13107 - 13907 767 266 aa, chain + ## HITS:1 COG:ZyicI KEGG:ns NR:ns ## COG: ZyicI COG1501 # Protein_GI_number: 15804198 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 EDL933 # 1 266 1 266 772 558 99.0 1e-159 MKISDGNWLIQPGLNLIHPLQVFEVEQQGNEMVVYAAPRDVRERTWQLDTPLFTLRFFSP QEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSL DFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVE TWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYF VIDGPTSKAVLDRYTRFTGRPALPPA >gi|299857023|gb|ADWS01000041.1| GENE 13 14034 - 15425 1258 463 aa, chain + ## HITS:1 COG:yicI KEGG:ns NR:ns ## COG: yicI COG1501 # Protein_GI_number: 16131527 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Escherichia coli K12 # 1 463 310 772 772 989 98.0 0 MKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKR PDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFD GSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYES MAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPW AYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYM LGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHSFLSLPIYVRDNTLL ALGNNDQRPDYAWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAG EAKNWTLCLRNVVKVNGLQGGSQAESEQGLVVTPQGNALTITL >gi|299857023|gb|ADWS01000041.1| GENE 14 15477 - 17186 1443 569 aa, chain - ## HITS:1 COG:no KEGG:LF82_3356 NR:ns ## KEGG: LF82_3356 # Name: yicH # Def: uncharacterized protein yich # Organism: E.coli_LF82 # Pathway: not_defined # 1 569 1 569 569 1073 97.0 0 MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPS HIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFK ADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVLGTKAQIQFSAGSLSLNDVPA TNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADDSWQVENLRMADIRLQSEKSLTD FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASE FIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLE YTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTD HKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ TPQRQTHISLNGRGVPVNILQQWGWPELPITGDGNIQLVASGAIQANATLKPTVNGQLHA VNAEKQQVTQTMNAGVVSSSEVTSTEPVQ >gi|299857023|gb|ADWS01000041.1| GENE 15 17307 - 18698 1641 463 aa, chain - ## HITS:1 COG:ECs4530 KEGG:ns NR:ns ## COG: ECs4530 COG2233 # Protein_GI_number: 15833784 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 784 99.0 0 MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITPALLICQA LGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKT GGADVPTMMAALFGTLMLASCTEMVLSRVLHLARRIITPLVSGVVVMIIGLSLIQVGLTS IGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNPYLRVASLVIAMAAGYALAWFMG MLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLMLVFMITSLETIGDITATSDVSEQPV SGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLI VLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGL GVSQQPLILQFAPEWLKNLLSSGIAAGGITAIVLNLIFPPEKQ >gi|299857023|gb|ADWS01000041.1| GENE 16 18978 - 20183 1373 401 aa, chain + ## HITS:1 COG:ECs4529 KEGG:ns NR:ns ## COG: ECs4529 COG0786 # Protein_GI_number: 15833783 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Escherichia coli O157:H7 # 1 401 1 401 401 619 100.0 1e-177 MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLLVALALLVLKKSMGWEV NFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVVGLLVMQNAIGIGMASLLG LDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEVAMACATFGLVLGGLIGGPVA RYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLIETIALIAICLTVGKIVAQLLAG TAFELPTFVCVLFVGVILSNGLSMMGFYRVFERAVSVLGNVSLSLFLAMALMGLKLWELA SLALPMLAILVVQTIFMALYAIFVTWRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAI TERFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPIFAG >gi|299857023|gb|ADWS01000041.1| GENE 17 20186 - 21052 638 288 aa, chain + ## HITS:1 COG:no KEGG:B21_03462 NR:ns ## KEGG: B21_03462 # Name: ybl159 # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 288 1 288 288 576 100.0 1e-163 MKKRRKEPETLREHCRHIFGDEPPVLCVWETEFDYADAELKALAAKEWQQISEWDLSAYY VLNLVYNEPMQIELFRYLFPLCLAQWHETVLAGGYGDHFEESLMKALCRPYLWQEMMNAS QRQQVRQFLLDTALQRMDNERGFNNVLCWLAVFNTLGGAAPLIRSLWSRWWALDTPGKAV CAIQYAAHLIYPIEANPLWSQEWIGWGHPLGHKDGWSSDNRAFLRQMLTPEMIVAGVQAA AEILRGEPEGAMAARIAQDAYEAMDILTIQIEDLLRDLSCDESGHALE >gi|299857023|gb|ADWS01000041.1| GENE 18 21037 - 23118 2117 693 aa, chain - ## HITS:1 COG:ZrecG KEGG:ns NR:ns ## COG: ZrecG COG1200 # Protein_GI_number: 15804193 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Escherichia coli O157:H7 EDL933 # 1 693 12 704 704 1302 98.0 0 MKGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRYEDRTHLYPIGELLPGV YATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAAMKNSLATGRRVLAYGEAK RGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALDLLDTCAIE ELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQHPAQRRLILEELLAHNLSMLALR AGAQRFHALPLSANDALKNKLLAALPFKPTGAQARVVAEIEHDMALDVPMMRLVQGDVGS GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFAPLGIEVGWLAGKQKGKAR LAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFH PHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRTDIIDRVRHACM TEGRQAYWVCTLIEESELLEAQAAEATWEELKLALPELNVGLVHGRMKPAEKQAVMASFK QGELQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKT PLSKTAQIRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPE VQRLARHIHERYPQQAKALIERWMPETERYSNA >gi|299857023|gb|ADWS01000041.1| GENE 19 23124 - 23813 608 229 aa, chain - ## HITS:1 COG:ECs4526 KEGG:ns NR:ns ## COG: ECs4526 COG0566 # Protein_GI_number: 15833780 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 447 100.0 1e-126 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM ASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQ EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG >gi|299857023|gb|ADWS01000041.1| GENE 20 23820 - 25928 2041 702 aa, chain - ## HITS:1 COG:ECs4525 KEGG:ns NR:ns ## COG: ECs4525 COG0317 # Protein_GI_number: 15833779 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Escherichia coli O157:H7 # 1 702 1 702 702 1414 100.0 0 MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMK LDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFR KMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKT ELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHL YSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKA NGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQ SLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHA CVGARVDRQPYPLSQPLTSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKRD DSVSLGRRLLNHALGGSRKLNEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKN LQHGDASIPPATQSHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCR NIRGYQKEPEKFMAVEWDKETAQEFITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTE EKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN >gi|299857023|gb|ADWS01000041.1| GENE 21 25947 - 26222 496 91 aa, chain - ## HITS:1 COG:ECs4524 KEGG:ns NR:ns ## COG: ECs4524 COG1758 # Protein_GI_number: 15833778 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Escherichia coli O157:H7 # 1 91 1 91 91 112 100.0 2e-25 MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN NQILDVRERQEQQEQEAAELQAVTAIAEGRR >gi|299857023|gb|ADWS01000041.1| GENE 22 26277 - 26900 543 207 aa, chain - ## HITS:1 COG:gmk KEGG:ns NR:ns ## COG: gmk COG0194 # Protein_GI_number: 16131519 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Escherichia coli K12 # 1 207 1 207 207 398 100.0 1e-111 MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHD EFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARS IFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLK TIIRAERLRMSRQKQRHDALISKLLAD >gi|299857023|gb|ADWS01000041.1| GENE 23 27158 - 28840 955 560 aa, chain + ## HITS:1 COG:ECs4522 KEGG:ns NR:ns ## COG: ECs4522 COG0272 # Protein_GI_number: 15833776 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli O157:H7 # 1 560 3 562 562 1053 99.0 0 MKVWMAILISILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV YDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGE IFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMTDRLKELA TAGFTLTQRYTRAVKNADEVARVRNEWWKAKLPFVTDGVVVRGAKEPESRHWLPGQAEWL VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA PGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWL GSKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHRFNLA RKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN AQIKKLGSWLAAQQITGFEP >gi|299857023|gb|ADWS01000041.1| GENE 24 28837 - 29454 862 205 aa, chain - ## HITS:1 COG:yicG KEGG:ns NR:ns ## COG: yicG COG2860 # Protein_GI_number: 16131517 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 205 19 223 223 326 100.0 2e-89 MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVK HPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGHGPIIAVV AAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLVF GFFARLLALRLKLGLPVFYYSHEGH >gi|299857023|gb|ADWS01000041.1| GENE 25 29746 - 30570 363 274 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4110 NR:ns ## KEGG: EC55989_4110 # Name: dinD # Def: DNA-damage-inducible protein D # Organism: E.coli_55989 # Pathway: not_defined # 1 274 5 278 278 503 99.0 1e-141 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD DEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAIDFAIFQNHGYRGLYGGLDQK AIHKRKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK >gi|299857023|gb|ADWS01000041.1| GENE 26 30791 - 31654 1168 287 aa, chain - ## HITS:1 COG:ECs4519 KEGG:ns NR:ns ## COG: ECs4519 COG1561 # Protein_GI_number: 15833773 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 455 99.0 1e-128 MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRSRLTRG KVECTLRYEPDVSAQGEMILNEKLAKQLVTAANWVKMQSDEGEINPVDILRWPGVMAAQE QDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRLEGVTAEVVKVRAHMPEILQW QRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEELDRLEAHVKETYNILKKKEAVGR RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE >gi|299857023|gb|ADWS01000041.1| GENE 27 31781 - 32497 828 238 aa, chain + ## HITS:1 COG:ECs4518 KEGG:ns NR:ns ## COG: ECs4518 COG0689 # Protein_GI_number: 15833772 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 416 100.0 1e-116 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQ ADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVED SAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLLALARGGIESIVATQKAALAN >gi|299857023|gb|ADWS01000041.1| GENE 28 32563 - 33204 846 213 aa, chain + ## HITS:1 COG:ECs4517 KEGG:ns NR:ns ## COG: ECs4517 COG0461 # Protein_GI_number: 15833771 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 213 1 213 213 419 100.0 1e-117 MKPYQRQFIEFALGKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDS GLEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEAKDHGEGGNLVGSALQGRV MLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRGEISAIQEVERDYNCKVIS IITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV >gi|299857023|gb|ADWS01000041.1| GENE 29 33241 - 33837 699 198 aa, chain - ## HITS:1 COG:ECs4516 KEGG:ns NR:ns ## COG: ECs4516 COG1309 # Protein_GI_number: 15833770 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 198 15 212 212 340 100.0 7e-94 MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFD SLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGHALMFEQDR LQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLASQILAFCEGMLSRFVRSEFKY RPTDDFDARWPLIAAQLQ >gi|299857023|gb|ADWS01000041.1| GENE 30 33944 - 34402 577 152 aa, chain - ## HITS:1 COG:ECs4515 KEGG:ns NR:ns ## COG: ECs4515 COG0756 # Protein_GI_number: 15833769 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Escherichia coli O157:H7 # 2 152 1 151 151 298 100.0 2e-81 MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELAPGDTTLVPTGLAIHIA DPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIAQM IFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ >gi|299857023|gb|ADWS01000041.1| GENE 31 34380 - 35600 1137 406 aa, chain - ## HITS:1 COG:ECs4514 KEGG:ns NR:ns ## COG: ECs4514 COG0452 # Protein_GI_number: 15833768 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Escherichia coli O157:H7 # 1 406 25 430 430 765 100.0 0 MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQAVSGYPV SDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTICLATPAPVAV LPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRMLDPLTIVDMAVAHF SPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAARRGANVTLVSGPVSL PTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDEL TIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQ GFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNRR >gi|299857023|gb|ADWS01000041.1| GENE 32 35772 - 36440 445 222 aa, chain + ## HITS:1 COG:ECs4513 KEGG:ns NR:ns ## COG: ECs4513 COG2003 # Protein_GI_number: 15833767 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli O157:H7 # 1 222 3 224 224 432 99.0 1e-121 MKNNAQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER EIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI >gi|299857023|gb|ADWS01000041.1| GENE 33 36657 - 36893 403 78 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804178|ref|NP_290217.1| 50S ribosomal protein L28 [Escherichia coli O157:H7 EDL933] # 1 78 1 78 78 159 100 2e-38 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID KKGIDTVLAELRARGEKY >gi|299857023|gb|ADWS01000041.1| GENE 34 36914 - 37081 280 55 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804177|ref|NP_290216.1| 50S ribosomal protein L33 [Escherichia coli O157:H7 EDL933] # 1 55 1 55 55 112 100 3e-24 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK >gi|299857023|gb|ADWS01000041.1| GENE 35 37179 - 37988 801 269 aa, chain + ## HITS:1 COG:ECs4510 KEGG:ns NR:ns ## COG: ECs4510 COG0266 # Protein_GI_number: 15833764 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 556 100.0 1e-158 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLL LELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL EGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG IHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK GEPCRVCGTPIVATKHAQRATFYCRQCQK >gi|299857023|gb|ADWS01000041.1| GENE 36 38027 - 38506 393 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 2 159 3 160 164 155 46 3e-37 MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATA HLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMP SKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA >gi|299857023|gb|ADWS01000041.1| GENE 37 38514 - 38855 414 113 aa, chain - ## HITS:1 COG:ECs4508 KEGG:ns NR:ns ## COG: ECs4508 COG1519 # Protein_GI_number: 15833762 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Escherichia coli O157:H7 # 1 113 313 425 425 228 100.0 2e-60 MLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVT DATTLAKEVSSLLTDADYRSFYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH Prediction of potential genes in microbial genomes Time: Sun May 15 22:46:29 2011 Seq name: gi|299857022|gb|ADWS01000042.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont41.1, whole genome shotgun sequence Length of sequence - 39032 bp Number of predicted genes - 49, with homology - 45 Number of transcription units - 24, operones - 16 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Op 1 28/0.000 - CDS 206 - 1795 1202 ## COG0419 ATPase involved in DNA repair 3 2 Op 2 . - CDS 2058 - 3143 573 ## COG0420 DNA repair exonuclease - Prom 3256 - 3315 6.6 4 3 Tu 1 . - CDS 3408 - 4043 220 ## HCM2.0130c hypothetical protein - Prom 4069 - 4128 4.1 + Prom 4239 - 4298 2.9 5 4 Tu 1 . + CDS 4365 - 5459 476 ## PSLT023 DNA replication protein - Term 5995 - 6030 5.0 6 5 Op 1 . - CDS 6039 - 6251 235 ## YPMT1.45c hypothetical protein 7 5 Op 2 . - CDS 6251 - 6586 215 ## YPDSF_4079 hypothetical protein 8 5 Op 3 . - CDS 6583 - 6762 66 ## gi|293411946|ref|ZP_06654671.1| conserved hypothetical protein - Prom 6786 - 6845 1.9 9 6 Op 1 . - CDS 6876 - 7076 113 ## HCM2.0003c hypothetical protein 10 6 Op 2 . - CDS 7132 - 7557 383 ## HCM2.0004c hypothetical protein - Prom 7587 - 7646 4.2 - Term 7601 - 7631 3.0 11 7 Op 1 . - CDS 7649 - 8479 918 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 12 7 Op 2 . - CDS 8483 - 8683 255 ## gi|293411942|ref|ZP_06654667.1| conserved hypothetical protein - Prom 8706 - 8765 7.8 - Term 8741 - 8769 3.0 13 8 Op 1 . - CDS 8776 - 11115 1710 ## COG0468 RecA/RadA recombinase 14 8 Op 2 . - CDS 11118 - 11384 288 ## YPDSF_4085 hypothetical protein 15 8 Op 3 . - CDS 11384 - 12328 660 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) - Term 12338 - 12371 4.7 16 9 Op 1 . - CDS 12389 - 13417 838 ## YPDSF_4087 hypothetical protein 17 9 Op 2 . - CDS 13535 - 13966 246 ## HCM2.0012 hypothetical protein - Prom 13992 - 14051 6.6 - Term 14051 - 14082 2.1 18 10 Op 1 . - CDS 14092 - 15261 738 ## COG0587 DNA polymerase III, alpha subunit 19 10 Op 2 . - CDS 15258 - 15992 303 ## gi|268589818|ref|ZP_06124039.1| putative HNH endonuclease domain protein 20 10 Op 3 . - CDS 16041 - 18404 1312 ## COG0587 DNA polymerase III, alpha subunit - Prom 18424 - 18483 1.7 21 11 Op 1 3/0.000 - CDS 18585 - 19820 582 ## COG0714 MoxR-like ATPases 22 11 Op 2 . - CDS 19916 - 22024 694 ## COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) - Prom 22044 - 22103 4.8 23 11 Op 3 . - CDS 22123 - 22335 165 ## HCM2.0018c hypothetical protein - Prom 22355 - 22414 4.8 + Prom 22399 - 22458 4.1 24 12 Tu 1 . + CDS 22586 - 22972 318 ## YPDSF_4096 hypothetical protein - Term 22718 - 22746 -0.0 25 13 Tu 1 . - CDS 22967 - 23809 199 ## COG0582 Integrase - Prom 23966 - 24025 2.0 - Term 23868 - 23916 1.0 26 14 Op 1 . - CDS 24133 - 24336 89 ## 27 14 Op 2 . - CDS 24281 - 24526 253 ## COG0695 Glutaredoxin and related proteins 28 14 Op 3 . - CDS 24526 - 24651 95 ## - Prom 24675 - 24734 4.0 - Term 24672 - 24727 9.6 29 15 Op 1 . - CDS 24764 - 25315 288 ## HCM2.0027c hypothetical protein - Prom 25408 - 25467 2.5 30 15 Op 2 . - CDS 25584 - 26138 269 ## HCM2.0028c putative lipoprotein - Prom 26256 - 26315 4.9 31 16 Tu 1 . + CDS 26194 - 26325 69 ## + Prom 26338 - 26397 1.5 32 17 Tu 1 . + CDS 26514 - 26702 116 ## - TRNA 26747 - 26822 101.0 # Thr TGT 0 0 - TRNA 26827 - 26913 43.7 # Tyr GTA 0 0 - TRNA 26919 - 26993 88.7 # Asn GTT 0 0 33 18 Op 1 . - CDS 27772 - 28062 256 ## HCM2.0031c hypothetical protein 34 18 Op 2 . - CDS 28059 - 28211 166 ## YP_pMT087 hypothetical protein 35 18 Op 3 . - CDS 28208 - 28423 293 ## YPDSF_4100 hypothetical protein 36 18 Op 4 . - CDS 28407 - 28586 142 ## HCM2.0034c hypothetical protein 37 18 Op 5 . - CDS 28583 - 29905 1047 ## YP_pMT090 putative DNA ligase 38 18 Op 6 . - CDS 29902 - 30156 224 ## YPDSF_4102 hypothetical protein - Prom 30321 - 30380 2.6 39 19 Op 1 . - CDS 30440 - 31216 445 ## HCM2.0038c hypothetical protein 40 19 Op 2 . - CDS 31292 - 32431 417 ## HCM2.0040c hypothetical protein - Prom 32491 - 32550 2.2 - Term 32511 - 32550 7.1 41 20 Op 1 . - CDS 32555 - 33895 746 ## HCM2.0041c putative DNA helicase 42 20 Op 2 . - CDS 33939 - 34679 447 ## HCM2.0042c hypothetical protein - Prom 34820 - 34879 9.6 43 21 Tu 1 . + CDS 35280 - 35729 263 ## COG3680 Uncharacterized protein conserved in bacteria + Term 35744 - 35790 11.1 - Term 35645 - 35675 -0.6 44 22 Op 1 . - CDS 35782 - 36141 285 ## HCM2.0045c hypothetical protein 45 22 Op 2 . - CDS 36141 - 36809 572 ## COG1192 ATPases involved in chromosome partitioning - Prom 36866 - 36925 4.7 - Term 36951 - 36979 1.0 46 23 Op 1 . - CDS 36986 - 37738 221 ## EpC_01800 conserved uncharacterized protein 47 23 Op 2 . - CDS 37723 - 38106 168 ## EpC_01790 conserved uncharacterized protein - Prom 38221 - 38280 4.9 48 24 Op 1 . - CDS 38435 - 38686 247 ## gi|293411908|ref|ZP_06654633.1| conserved hypothetical protein 49 24 Op 2 . - CDS 38688 - 39032 248 ## HCM2.0049c hypothetical protein Predicted protein(s) >gi|299857022|gb|ADWS01000042.1| GENE 1 17 - 202 196 61 aa, chain + ## HITS:1 COG:ECs1339 KEGG:ns NR:ns ## COG: ECs1339 COG3436 # Protein_GI_number: 15830593 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 61 477 537 537 140 100.0 6e-34 MFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTN K >gi|299857022|gb|ADWS01000042.1| GENE 2 206 - 1795 1202 529 aa, chain - ## HITS:1 COG:YPMT1.40c KEGG:ns NR:ns ## COG: YPMT1.40c COG0419 # Protein_GI_number: 16082825 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Yersinia pestis # 1 521 12 532 638 712 80.0 0 MAIASAEVELDQRGLVLIQGVNSDDSSASSNGSGKSTLMNSLMWCLYGETAHGVKGDDVL STDHEKNCRVAVTIEDEGKRYAIIRHRKHKEFKNRLIVRGEDGDMTKGKDALTQEFVERL IGASKEVFMASIYASQEAMPDLPGMSDKNLKTIVEEAAGVDRLTRAYAIARERANAAAAR MDVVKTKLESTISTIEATQSEIESAKASSESWEQERSKRYDDALAGLASAEVELTEVELE IRTLPEQIRDTEKAIESERKKLASKEEHDAKLLKVRGAITDIRASIKATENSQADAMNRA RNFKTKAEEVGTKVGSPCPTCGKAYCEEDLSTVKENFIEQARQEIGQAKTLAEAMAKHKT NLEKALSIESALVKTTPDVTAIIARIEELTKQLSSLRHREKEVVAIESLVTRARTEVDRI SKEINPFIALIARHEDNLVSSKSTFKSLKDELKAIQEQTLLLEKARQVYSPAGVRSHILT SVTPFLNTRTAEYLNTLSDGNITAEWSTMDVTKKGEYRDKFVSVNGAPY >gi|299857022|gb|ADWS01000042.1| GENE 3 2058 - 3143 573 361 aa, chain - ## HITS:1 COG:YPMT1.41c KEGG:ns NR:ns ## COG: YPMT1.41c COG0420 # Protein_GI_number: 16082827 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Yersinia pestis # 1 361 1 361 361 627 88.0 1e-179 MTLPYGVISDCHYHKWDAFSTTNAEGLNSRLEIQLEATKEAAIAMKKAGCKYMLVAGDTF HVRGTVSPSVLHYVTETYKWIINELDLTVVMLAGNHDLETNDSVYSANAAASLSSIGVVI VCGKRPHSIKIGDVTVHLISWRNNHAELISDLKALRKSVEGDNHDVVIHTSINKAIPTMP DVGIDAQELKDIGFRLVLSGHYHNHKEVIPGVISVGALTHQNWGDVGSLAGYMIVNPDGS FSHYETSAPKFINLEDYVADDQIRGNYVRFRAVIENDEEGIKYQNILKTMGAKGVVCNFI RKSSMMEGTASTTETSKIDSLGESVSAYCKIVHDTDGGFDLSKLDILCQEILTEAESSEA V >gi|299857022|gb|ADWS01000042.1| GENE 4 3408 - 4043 220 211 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0130c NR:ns ## KEGG: HCM2.0130c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 209 1 209 214 382 86.0 1e-105 MDLKRTRWVRRLEDGSYTIESNSNLNKQKLLCDICGIAAKCPIYETRIKLDKAGVNFHLN SCIRYVPLLAFRKPIIGLDAPYFNTLRSGVTWRDRLSPDKLICLVSADTGKIIRFGKVDK VYSGPVDEMLRKHSRFNHLCMGGEKIEKVEEVIRKSYGHFLTKDSLLTAIYIRHVKREFD LEYHSEEELNLVDPRPKAGVISINAARKKAH >gi|299857022|gb|ADWS01000042.1| GENE 5 4365 - 5459 476 364 aa, chain + ## HITS:1 COG:no KEGG:PSLT023 NR:ns ## KEGG: PSLT023 # Name: repA2 # Def: DNA replication protein # Organism: S.typhimurium # Pathway: not_defined # 33 339 15 315 329 295 52.0 1e-78 MSTKNKKGKNNKEVEDNIDNFEEGSLELYTGELVPNSNNTVQPIALMRLGLFVPTLKGTK YSKRNKPNEIDASKELVQLEVARSEGYSDIKITGPRLDMDHDFKTWVGVVRSLAEYGEPN GRVELSITKFAKFCGYPSSQIRKTLRDRLTNSLLKIMRTTLSFQRTYEEKNVDGSNKISL LMVHLINSVDYNEQKDTVVFYAEPKLAELYRFDHKVLLQLKVINKLPRKETAQALYTFIE SLPTKPAPVSLARLRARLNLSSRNVSSQNQTIRNGLKALQDLGYLEYSEIKRGRSIYIQI HSRNPKLKVAPPKPEDIEPKKPDEKAGEIDAKQNIINKITELSQNLTPENIKMIEILSNS LKLL >gi|299857022|gb|ADWS01000042.1| GENE 6 6039 - 6251 235 70 aa, chain - ## HITS:1 COG:no KEGG:YPMT1.45c NR:ns ## KEGG: YPMT1.45c # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis # Pathway: not_defined # 1 70 2 71 71 122 92.0 3e-27 MALTLAGLEIEKTSGYWRAKGFKQPGILERLEREDGYIVHQRREWRMYDPETGKLTTKAG TLWGLLKKIH >gi|299857022|gb|ADWS01000042.1| GENE 7 6251 - 6586 215 111 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4079 NR:ns ## KEGG: YPDSF_4079 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 111 1 111 111 150 68.0 2e-35 MKTIPFALLFLSSIVVADTTVYQCEMSVADVKNGTLTDVIKAPYGAMVVDSGDQFYVVRD DRVLSSPYLTNRNGKLTGVGEDHFVYNKYKGFYGVHASQQSYLFDDCKEVG >gi|299857022|gb|ADWS01000042.1| GENE 8 6583 - 6762 66 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293411946|ref|ZP_06654671.1| ## NR: gi|293411946|ref|ZP_06654671.1| conserved hypothetical protein [Escherichia coli B354] # 1 59 1 59 59 62 98.0 7e-09 MKIFIEYLLLIVSIAFVIDCIFTGVIRKVFSPVHDVVINALAIVLVFNSAFDVIKEVAA >gi|299857022|gb|ADWS01000042.1| GENE 9 6876 - 7076 113 66 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0003c NR:ns ## KEGG: HCM2.0003c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 65 1 65 91 99 76.0 3e-20 MRVLVRIVTSTVYDVFPLFMVKVDGLNDEETDALIQRTLVEYTGHDADSVMVDDDGVCWH NGNCWT >gi|299857022|gb|ADWS01000042.1| GENE 10 7132 - 7557 383 141 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0004c NR:ns ## KEGG: HCM2.0004c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 4 137 1 134 136 216 76.0 3e-55 MTVIKKLYDAANVALDVIDDEVAKGFPEPDWAHQLRNAIAEMTPPDPTPDETDWQRFIRM YAQEIGPTPTAEQAMLLKYFKEAGEDLPIDDSAYWFHCAWRKYDVIFTQGMGSKDMVVWH LLHIDTAVDRVIEQFFPNQED >gi|299857022|gb|ADWS01000042.1| GENE 11 7649 - 8479 918 276 aa, chain - ## HITS:1 COG:YPMT1.49c KEGG:ns NR:ns ## COG: YPMT1.49c COG0330 # Protein_GI_number: 16082838 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Yersinia pestis # 1 276 1 276 276 510 93.0 1e-144 MKKGLLAVALAAICTMGLTGCDRVEPGYVGIKVNKLGEDKGIGEVVGVGRQWTGLNTELY VFPTFKQMKTYDEPFTFQMSDGTAIGHKIGVAYLVNRDKVTTVFQTYRKGVDDITESDLR QKIADSLNRLASRMTTDSFIDGGKAQLLDNALKDIQKEMSPVGIEVLSLSWVGKPDYPKT VIESINAKVTANQRTLQRQQEVEQRKAEANMLREQANGEADAIRARAQAEADAIRLRGEA LRQNPNVMELEAINKWNGQLPQYMTQGANTPFITVK >gi|299857022|gb|ADWS01000042.1| GENE 12 8483 - 8683 255 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293411942|ref|ZP_06654667.1| ## NR: gi|293411942|ref|ZP_06654667.1| conserved hypothetical protein [Escherichia coli B354] # 1 66 1 66 66 84 95.0 2e-15 MIKIYLLAVATGVSVALIYGLLVPSLISTKSDLAVMFGVIVGFGAPVIGLIAGRKFINSL IKAKGK >gi|299857022|gb|ADWS01000042.1| GENE 13 8776 - 11115 1710 779 aa, chain - ## HITS:1 COG:YPMT1.50c KEGG:ns NR:ns ## COG: YPMT1.50c COG0468 # Protein_GI_number: 16082840 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Yersinia pestis # 487 779 65 357 358 579 94.0 1e-165 MAKGKSALALALKKKIGSNDEIQKVTHWIDTGFPPLNKAISGRYDGGFPCGRIVEVFGPP SAGKCVTADTMLLTERGMVTVKELFEIEGYKATCTTRDVEHNVGLINENGVIEKTSHLTW NNRRKFKRIKLASGGYIEATFRHPIRVVDDLGNVVWRHAEKISVGDTIPSMVGTHQFGDQ HLDANIAKLMGYLIADGYVASENSVNFSNTDPFIKDEYYRLISLVSDKMPVTRKHNGSED HVLFSKEVRSLLFKEYGLEYEKAAGKQVPLSVRRANSEAQIAFLRGYFELECHVNDGRCI EVVSASGLLLQQIRLMLLNLGITSTISEKHVAGYENTYYRLSFSGSNYDLFLSTIGFESP ARLSVATKRDIGFDRTYSGYVPHISGLVKSLYESLTKTTREDYALVDHVIGRGDRVGIDK LREIYVSFIGRKNRFNEHLFAQLAAVIGSNLFYDEVVAIEEGEAPTFDVAMPETHSFWSN GIISHNTFLATAAMISAQKQDGLAVFLDHENSFDVGLAVANGLNADEDDGQWVYKQPDTF EDSVELIGTILKLVRDEELIPESAPICIVADSLASMVPNSKAEKFEKMAEGTAKDKDQLN MNDNTALARATSANFPTLALWARKYNACIIFLNQVRTKIGVMFGDPTTSPGGDSPKFYAS VRIRLGASVMKDGKEKIGQDVGAECIKNKVAPPYGKCTWKFYFDPTRGLDVIESLVEYML EEGYLPKNASGRVEIGDKKYTKSQIVEMYREKPLAEIIAALQAIDDRRAKDNPTESVEE >gi|299857022|gb|ADWS01000042.1| GENE 14 11118 - 11384 288 88 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4085 NR:ns ## KEGG: YPDSF_4085 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 88 1 88 88 123 77.0 2e-27 MLKSIINGATTTPAQLAKEIVFYHGEYAVIALPSILGAAGMKATDREFGLVSEQVVKILA RVSRLLNHDAIVFDESAALKRINETKGA >gi|299857022|gb|ADWS01000042.1| GENE 15 11384 - 12328 660 314 aa, chain - ## HITS:1 COG:YPMT1.51c KEGG:ns NR:ns ## COG: YPMT1.51c COG0258 # Protein_GI_number: 16082842 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Yersinia pestis # 1 314 1 314 314 579 90.0 1e-165 MNYLFVDGNSLGYYHQQSDKLHNGEMEVQAAFGFVKNVRRYASILHARPMILWDGFSDKR RDFYPDYKANRDDDPDMKKMKEGFAIQKPYILKMMTALGVTQLIAKDAEADDLAGLLVAS IAPQPIVEHIYLLTGDSDWLQLVRENVSWVSLREDAKNKQVNFEQFAELTGFATPRAFLE AKALQGDKSDNISGVGGIGAGGAKELLHEWGSVATMVRGINDGSIVVDKGRHKTAFNKLA KNAFNEKTGCRMLEAFKRNITLMNLIETKFPPTEIETIKGNRDVKAFEQLCYELNFRSFL EDLEVFVLPFERYC >gi|299857022|gb|ADWS01000042.1| GENE 16 12389 - 13417 838 342 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4087 NR:ns ## KEGG: YPDSF_4087 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 342 1 342 342 521 82.0 1e-146 MSKTLLDLLNKTREDIAAKRGNNVDLTRLKDGVNYIRIFPNKDDPNGKFFQTFGMHYVKY QNEEGKEATNAYICEQHTHGRACQLCEMVMEGRARHKGNKAMEERIGQMRATPRYLVNGI LSAREDFADAEKCQLIELPSTVFDDICKAITEDIADDIGNPLSKEEGYAFLIKRTGSGRD TKYDVSPKRKVYKGDIEDKFWNTQHDLIAYANQADETRLLSTVRTMGRLIGIAAPTAAAS APAISSTAKTSAAALPGFGSVTGHTEGATAVATAHTPASEPTSLVDEEILRAVETEFKPE ASSAAVAVSVKESEAVAATSVAAASATEDEGLDDLLRELDSL >gi|299857022|gb|ADWS01000042.1| GENE 17 13535 - 13966 246 143 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0012 NR:ns ## KEGG: HCM2.0012 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 143 1 143 143 221 86.0 8e-57 MITDIYEKIMSDLEFDRDNLEEVWRRQPRLLMEYGSKLAHAERSVAEAKLNLEAVEAKLY DTERKNLSMNGIKFNESVLDAKVKTNPQYLSKRQKLDEARHIADIYKHAVAAFSHRRDMI VQASKMAIVELERLGSERFITPR >gi|299857022|gb|ADWS01000042.1| GENE 18 14092 - 15261 738 389 aa, chain - ## HITS:1 COG:NMA0632 KEGG:ns NR:ns ## COG: NMA0632 COG0587 # Protein_GI_number: 15793619 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Neisseria meningitidis Z2491 # 12 173 728 886 1144 125 43.0 1e-28 MKITGVVEESNGLTHERAEEIWNMFEKSGAYAFNKSHSVAYSLISYQSMWLKTHYPAEFF AAALTILGEDKHQGLVKDALTYGIRVLPPDVNVSSNRIEIRTLEDGSQVLYAPFSAVKGC SENGCQAIMRAREKVGGKFESLAQFEEAVEKRACNSRVRESLQKVGAFASIEPGSLPATD PERLRDQAELMGNLVIDAVKASRPFEMNPKRSAEINVLMTRMAAEMGLGDELIRPSIGIK PKIMIILDNANGNDARTGYFMENGYDDFKAKLLTAGDLRMGDLYVTGVCKKVKDKEKDYT KDEIGQFTDFMREEINLVRPTYVLTCGSRATALFNNKNKPSDLVGRKEYLPDLDVTVFYG FNPNILYFRPEEGERLEAILADVAETIKS >gi|299857022|gb|ADWS01000042.1| GENE 19 15258 - 15992 303 244 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|268589818|ref|ZP_06124039.1| ## NR: gi|268589818|ref|ZP_06124039.1| putative HNH endonuclease domain protein [Providencia rettgeri DSM 1131] # 113 216 107 207 230 67 33.0 7e-10 MPSTKYKITEEWLRQRYMVDLMRKEDIAAEAGCSKANIDRLLAKWGIRRGSARISATPAW NRGKNKNNDERMKRLSEARTGTGNPMYGKTSWNAGLRADIDERVATVSKKLTGRTIRAET KEKLAAAKRGKIGEEANNYKGGIIVKTNGYMMQLVGNNGVSQYEYVHRLIAKERLGRELR DDEHVHHINRDTIDNAPGNLVALPEDAHIRLHSEMREEIWSWERQRNWLASNGYEFVKID EVTA >gi|299857022|gb|ADWS01000042.1| GENE 20 16041 - 18404 1312 787 aa, chain - ## HITS:1 COG:aq_1008 KEGG:ns NR:ns ## COG: aq_1008 COG0587 # Protein_GI_number: 15606309 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Aquifex aeolicus # 4 741 8 761 1161 353 32.0 6e-97 MKALMVRTDFSLGESALKAENAVKIAREAGYTAVISADSMNIASVIPLQRAAGDDMAVIC GVKLNIVDDPTYEHRAKLAKESMRCMESLERGRNYSFTALIKNEQGYRDICELMTVANTR EQFYFVPRLSLEQLVSTYAKGNIILLTSDIGSVFQRNDFAKIISTLITAGGKDNFYSVVY PHPTPFYDQINVRAMKVASALKIEPVAFYPAYYESIDDADIKDIAHMVTNNIKIDQPHRL RIPHQRDNAINGRRHLLEALKAFSVRMDVPVTAAMASTTQDSIIDACTWRWHELPPALPK MADDEPATLMKLAVAGLRKRLTTKEFGYTPPASENRVYVERLKYEMDTLTRLGFCGYFLM VRDLMNHSRETGIPVGPGRGSSAGSLVAWCIGITNVDPIRHGLLFERFINPERLDLPDAD LDFSQARRHEVIEYLNERYGEDYVAGIPNFTYLGAASALRDTARIYGVESADMAVSKELK NVEDDSLPLEELREQLASLDKYATKYPDAFNAACKLQSLMRGFGRHAAGMIVAGVPLTER TPVERRGDARCIAFDKRYCEAMGLIKLDVLGLATLDLLDSAKRYIKENTGEDINLDAISL EDRKVLDGFAAGYTQGVFQLESGPMRKLLKDLGGGIEPMSFKTVVATTALFRPGPIQSGM LDDYVSVAKGFMAPHSLHPMLDDISRDTNGVLIYQEQIMAATRILAGFSMAEADSVRKAI GKKDMEKMKSIGGDFIKRAEEGWVTVSLDDGSTRKIHKAARLLCADGERRTYAEAMAINA DITSFDI >gi|299857022|gb|ADWS01000042.1| GENE 21 18585 - 19820 582 411 aa, chain - ## HITS:1 COG:YPMT1.88 KEGG:ns NR:ns ## COG: YPMT1.88 COG0714 # Protein_GI_number: 16082881 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Yersinia pestis # 1 411 1 411 411 702 81.0 0 MTTTALQNEKNPSDYLVCKWCGKSFHYFKSHVANGNCEGIPESVKDADPDTVLKMYTTQF PDEPTLSKKALDAIQAKRAEQKSEMAKSSGLTSSPGYTGTVEYKTDLVAAHELLNVTVEE LGTKRGTPLMVSVNVNTPYPEFVPEVKKGYVYGDFELIKDIFMMLELGIPGYLWGHAGTG KSSLPTQLCALLNRPLIRAQHTASMEEAHVTGQILARDGSTYFEPGLLALAMKHGWVYLA DEYDFAFPQILGVYQPVLEGEALVIKEATPEWRRITPHERFAFIGTGNTNGSGDETGLYQ GTNIQNAANFSRFGIVSNVKYMSKDAEINMLTNAGIVDEYAEKMVKFAGIVRDGYEEHLI SQPIGPRELLLSAKIGMMRGDFVTGIERSFINKLPSASAQAAREVVQKIFG >gi|299857022|gb|ADWS01000042.1| GENE 22 19916 - 22024 694 702 aa, chain - ## HITS:1 COG:YPMT1.87 KEGG:ns NR:ns ## COG: YPMT1.87 COG4547 # Protein_GI_number: 16082880 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) # Organism: Yersinia pestis # 7 701 10 787 788 830 59.0 0 MSKKRSIKEVQDFRDSVKRVVALLSGKNIPVAERGDDAYVRYNDDGEPILVNIPSIPDNA TPALMNAVRGFLDHEVAHILFTDIRVSNKMREKGRVPSWSLWNALEDVFIERKMGQVFNG TRRNLMATQRLIIEKVFKPKASEAIAYCGKDQRALFLNFFLCPVVRAWDGQAPFVDFMDE HWPVIEKPISLLKEHGIDVAVRNMSCTEDCVKVAATIAKILKDTESESKGKESAPGKTSD PSDADQTDASGENSEDNEDHETPSALDNHKSIKSESHSKYKHDNNDSDDSDNSESSETIF DDTENDKEVSDSDASDNAASESLPADHEKRKTTEDGSSDIPTPSKMSLEEALEELDSMED EVGGMTEDALSETIKSELTESSKSEYRPYNRSYDFIGSIDQAEAHIKRLIKTFSDIDLGG YPISRYRIVPEGNQLFDKYIEKHLSSGVSSTLAKDLERAIASRNRVQFIPGQRRGRIHGS SIYRLTMNDDRVFRKKEESKAVNACVQQVIDLSGSMSGETIKLALASAYTIADALDRINV PNIITGFTTFGSHMAAGELKAIKYEFSRFESLMLPIIKNWNEKANSREVRSRMGCVGYTF PLLNNVDGESIASLASLFSGRMEDRKIMLVLSDGAPWAVGRGFDAHLRSVAKQIETQTDI DLMAIGIMTDAPERFYSNHALVTSVDSLGSSVVTELYRIILK >gi|299857022|gb|ADWS01000042.1| GENE 23 22123 - 22335 165 70 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0018c NR:ns ## KEGG: HCM2.0018c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 68 1 68 70 64 52.0 1e-09 MNTTISSLIALEIGHVQKLADECVADILTDLPNEQIQVGVNDTTGFIFELNNKRFTLLNI GSGSLAVRIC >gi|299857022|gb|ADWS01000042.1| GENE 24 22586 - 22972 318 128 aa, chain + ## HITS:1 COG:no KEGG:YPDSF_4096 NR:ns ## KEGG: YPDSF_4096 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 128 1 128 128 152 64.0 3e-36 MSDNKIEFIESRYAAFIAGLIESSPMSQAQIAKTIGYKNANNLSLIKSGKIPLPIDKVRP LALALGIEPSRLMMMVLEERQPELAAFLYKEGTAPLNEDEKQVLAAYNERFGKEKGASQK VVEAIKSL >gi|299857022|gb|ADWS01000042.1| GENE 25 22967 - 23809 199 280 aa, chain - ## HITS:1 COG:YPMT1.85 KEGG:ns NR:ns ## COG: YPMT1.85 COG0582 # Protein_GI_number: 16082877 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Yersinia pestis # 1 280 113 392 392 521 89.0 1e-148 MVNQLVNPLILDGKIVMGRRVFSLMKQFLSWCAFQGMIDVSPLNDMSLNKVAGGAKPTPR ERKLTDAEVWVFWNIWDYFNVCAGTKWAARLCLVSARRPDEVLRAKKSEFNLKRGVWNQG KRNKSAREHSLPLSSLMRTCIEELFEYGKDSQWLVPSNKKIGKDLPMSKVAIAQALRRIL ERPELMELEPFTPRDLRRTARSYFPALGISQEVSRKIMNHSLEGIDRVYDRHDYMDEMRD ALESFSTYIASIVEQPDLDEIDHKFKGDRLSTELIRVNFS >gi|299857022|gb|ADWS01000042.1| GENE 26 24133 - 24336 89 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MANRLADTQNWLHTSAPSDLNGSQEPFLFPPNSLLFPLKFKKQRLNDSIPTMYGIITENE LLLLLIL >gi|299857022|gb|ADWS01000042.1| GENE 27 24281 - 24526 253 81 aa, chain - ## HITS:1 COG:HI1532 KEGG:ns NR:ns ## COG: HI1532 COG0695 # Protein_GI_number: 16273432 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Haemophilus influenzae # 1 76 1 77 87 83 55.0 9e-17 MKVVIYGRDNCSYCKRAVELAKQLKGHGYGDYEYIDITTAGIDKEKLSEIVGKPVETIPQ VLINGQPIGGYTELAAYVSTL >gi|299857022|gb|ADWS01000042.1| GENE 28 24526 - 24651 95 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGNKRKQARRAAHQALKSKPCIHYCEIGTIIVNEQQLHEVK >gi|299857022|gb|ADWS01000042.1| GENE 29 24764 - 25315 288 183 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0027c NR:ns ## KEGG: HCM2.0027c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 183 1 184 184 310 84.0 1e-83 MCRSHGALIDSDYTIYSVEQLKNWKQLAETQQSLLLQMTHQVSQNNYSERDVGVLKAITD IFNYNYLQMLKSEQFRAKVSTDITDPLYAFDNIAHNPFYSFNDVVLETIRMELVGKVNNF WALFREHSAGGLGYYDYIDIPHIRRFYPDQVERYYGIINQTQDLAYEISITAQKLLEIRA KLP >gi|299857022|gb|ADWS01000042.1| GENE 30 25584 - 26138 269 184 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0028c NR:ns ## KEGG: HCM2.0028c # Name: not_defined # Def: putative lipoprotein # Organism: S.typhi # Pathway: not_defined # 1 183 1 183 184 258 68.0 1e-67 MNKRNLNILASLVIMLALTGCNESEIDKITLIGRDKSDLAQNYKAQFQEQTPSIEVFALQ DKNAPNEQEPHTHGNLIDGKVESSLTTNVGKYTFMQIGEMMTREYGKPVATKDRIFDQEA ISGMDCIETKTCGAGKYYEVYRGKDRLVMVINGAGFVNEKEGVTLLSITDKMIKVSRLKE DKRK >gi|299857022|gb|ADWS01000042.1| GENE 31 26194 - 26325 69 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLPLLNEDPKVVKPYLEIFWSQPSKKGAEAPLNFALKKVLLGC >gi|299857022|gb|ADWS01000042.1| GENE 32 26514 - 26702 116 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLPTLQLLWLPVLISGLATPATDCIAVCELASCVAGAFLSAHQSAHQPQRKEHCMTFART YA >gi|299857022|gb|ADWS01000042.1| GENE 33 27772 - 28062 256 96 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0031c NR:ns ## KEGG: HCM2.0031c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 96 1 96 101 149 79.0 4e-35 MSNLTSWEWWLATYFLAAGVAFAFYVGQLVVKLLLIKFASHKRIDDGLWRLGTLVETRYG QLKENETITIQAKRFTATITRTPSRRVALIKKVTTE >gi|299857022|gb|ADWS01000042.1| GENE 34 28059 - 28211 166 50 aa, chain - ## HITS:1 COG:no KEGG:YP_pMT087 NR:ns ## KEGG: YP_pMT087 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Mediaevails # Pathway: not_defined # 1 50 1 50 50 72 72.0 7e-12 MIPYISLAFMGGFLIGFGICRDLIKQELKTKTLCIGKRVYRVVHEIKVKK >gi|299857022|gb|ADWS01000042.1| GENE 35 28208 - 28423 293 71 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4100 NR:ns ## KEGG: YPDSF_4100 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 71 1 71 71 86 69.0 3e-16 MIVLSKREKETLHEISKWPEFPEYWKPKTRAKLERLGLVANVSETWCSANYQLTDKGKVL LQQLVESGVLK >gi|299857022|gb|ADWS01000042.1| GENE 36 28407 - 28586 142 59 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0034c NR:ns ## KEGG: HCM2.0034c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 2 59 1 58 58 80 75.0 2e-14 MMLGWMIAFLAVGFFIGIVVMSSCINDYIKSGVIERRGRIYRIVEITNTLKEIKDDRIK >gi|299857022|gb|ADWS01000042.1| GENE 37 28583 - 29905 1047 440 aa, chain - ## HITS:1 COG:no KEGG:YP_pMT090 NR:ns ## KEGG: YP_pMT090 # Name: not_defined # Def: putative DNA ligase # Organism: Y.pestis_Mediaevails # Pathway: not_defined # 1 440 1 440 440 830 90.0 0 MKKLIALKHKLDEMKAMGTNAKKEALANMDDFEQSMVSLMLNPFIRFGVKKYKVAEPLSE SIPSDEKAIDVLNKLASRELTGNAAIAAVESIVASMCADGQDVFRRFLLKDPKAGVGISL CNKVFENPIPKFEVQLASPYKEKGDKYPFKPNPKAKWPMIGSLKLDGLRVICEVIVDEEE VNFLSRTGNPITSLDHLKPAMLELGKLSGHKHIFFDGEGTAGSFNQSVSALRKKNVQAIG AIYHVFDFFLPEWRAQAKSKEYAKTGMKLKERLAMLVALFKNDRSEGYTQDIHLHPFYII HSHEDFIERFMKRLDDNEEGEMGKDPNSVYEFKRTRSWWKLKDEDSEDGEIIDFEPGDPD SGFANTLGKIVIRLENGVIVRASGIKHKYLDEIWNNKEKYRGRIVEVHCHEKTPDGSLRH PRLKWPRCLRDTEDRIGDKE >gi|299857022|gb|ADWS01000042.1| GENE 38 29902 - 30156 224 84 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4102 NR:ns ## KEGG: YPDSF_4102 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 70 75 156 158 78 62.0 6e-14 MVEEIRKGESLYFEDMTVLIKEVEERNKQARTLKRKRDSVTINSMVKKSTTSQTAITDVY AALLEETTKETHEQIDQHMEVKQQ >gi|299857022|gb|ADWS01000042.1| GENE 39 30440 - 31216 445 258 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0038c NR:ns ## KEGG: HCM2.0038c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 258 1 264 264 209 41.0 1e-52 MKDEIQKLACDIIDKTGLEISESNRLDIIEKAVKTAMDHIATRLVEIPLPGLPYLKVKLH VWGEPSCARRSALVVFISKENPLSLKVQVGAWLDGRVIYTNTVFCLSNDETIEAAIQEAV LAMRSSGLMKNNYEEYLRSISGEKTLSLKADFVTPKNLLEVLLNKGANDAVNVIRESEYA SLCDMCKSQLDLVHIVIDAGKACDGVMAEFAWKVVRIANELPMIEQEAKSYATNHITELL APYRLESNQRKMISWGSW >gi|299857022|gb|ADWS01000042.1| GENE 40 31292 - 32431 417 379 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0040c NR:ns ## KEGG: HCM2.0040c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 378 24 402 403 733 91.0 0 MPVKSGIIVSELKELITELDFEQWLDTEGIVYRRGGVSTRGREVNIKECPVCGSSNWKVY FNLTSGVGKCFAGDHPEEIQFNKLVFLKHYSGKSRRQFEEYVQNALLSQGWAPKKEELVL ASTVELEEPVALPRHYELPIDGRLPDYLVERNISPEMAKYFDLRYCVEGKHAYVDPYTDQ VKGQIFDMRILIPVYDLDGVMKTFQGRDITGTAERRYLFPMQLPASGKFLYNGHNAVGKQ TVVVCEGAFDVMGVKRAIFDEETLRDYVEPIGTFGMHLSGNTTQDAEDQLGAFLTLKARG LRNVIMMWDSEKQAIRNTMAAARRLTSIGLNVKVACLGEEGLDPGGATPEQIIKAYYRAK PYTKQLELQSKVLGIKALS >gi|299857022|gb|ADWS01000042.1| GENE 41 32555 - 33895 746 446 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0041c NR:ns ## KEGG: HCM2.0041c # Name: not_defined # Def: putative DNA helicase # Organism: S.typhi # Pathway: not_defined # 1 445 1 445 446 801 93.0 0 MTELCHTGRGLSEEFDEDFQNRLTAYFCRDHEFLTRAGDLVVPSQFANAANAILVNMVSG YYRMYKSAPSSSAILDMLKRAKRDKTIREELFADVVAAFKRILAEKLSDTSYMVDQVSTF AKSVAFDDALIKAAELKEKGDFQGAMAIMARVQQIGSNEATGIYDYYTSASERLKAREYE ASEEYVPNSITTGLPLLDRLLYQKGWAKREMVLFMGFAKSGKSTAMGEFSINATLAGYNV LYLSLEVHTTILSDRFDARLSETEMSKLVERRDEVHRKLAELGATKGIGSLWVVERPSGS MSPADLDRMLNSMKANGMVPDMVVVDYADLMRASYDLRDDRANIRSIYTDLRALYDKHNV AGITASQTNREGGASEVATMMHAADNIEKVRIADLVITINKTEEEEAKGEARLYFAGSRN QQGGISIRVKQNLEQMRFIERILDVT >gi|299857022|gb|ADWS01000042.1| GENE 42 33939 - 34679 447 246 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0042c NR:ns ## KEGG: HCM2.0042c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 240 1 240 241 431 88.0 1e-119 MSQIFFDTIDNDQYDFMTEWNTAVMDKWVAENIGLSRCKDEAELFETKWFDYRDMHPLMA TCLFTEAYKRQYSNIMLTHGREHFETAPFTTGLKRLPYQELSTANKTSLWKARQFADRYC CSYDYFISTVLSAAARRLWNKLPRPQHLWQPELIEIFEEKLARRATTRLDDSLVSFKHMG DMQFNPIQESYFEWILERLRTIPRSKRIRAIFSAIWLMEIVPERLISAHFPEELEEARRF IDPLSN >gi|299857022|gb|ADWS01000042.1| GENE 43 35280 - 35729 263 149 aa, chain + ## HITS:1 COG:DR1144 KEGG:ns NR:ns ## COG: DR1144 COG3680 # Protein_GI_number: 15806164 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Deinococcus radiodurans # 33 120 137 225 247 73 46.0 9e-14 MMGRISLDAYHHLVLQEETEIAPEHAGLAFLLNSTYKSGMSALALYEATRGVWAKVPRDE NLKYAYATYGGLIMEVYQIECWVKAGSQQYFTRDIALGPDTKRYEFVGRIADEHIRKLYV GKLIKKPPSYGSPFVKVGVVRTEHSVSAA >gi|299857022|gb|ADWS01000042.1| GENE 44 35782 - 36141 285 119 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0045c NR:ns ## KEGG: HCM2.0045c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 119 1 119 119 178 94.0 5e-44 MSMKMGDLAKRKEPDAPAKNTTPLRQPVRPQGRPTRGKEKIKSRTMSLEDEYFELLEMMK FIPRFEKFTRSDVIRAAIFHLAEKSPQEIEDIVKLNEAITAADVTMRTDEIKRELMKKG >gi|299857022|gb|ADWS01000042.1| GENE 45 36141 - 36809 572 222 aa, chain - ## HITS:1 COG:aq_aa35 KEGG:ns NR:ns ## COG: aq_aa35 COG1192 # Protein_GI_number: 10957068 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Aquifex aeolicus # 3 211 2 202 213 69 29.0 4e-12 MTKIFVVGGTKGGPGKSTVAQQIAVCLKVKKKKKVYITDIDIQRTTTSWCEDRRQNEDLE LIPFAYVQDDIIKHLKSLQGRAEFVVVDAGGFDSEIQRQAMLMADVIIIPLRPKRRDLKS LRDIDPIIDNVRNVNDKVKVRAVMNQCPALPSQVSRILAAKEIVETFGIESAPVNLYNRN VYDDAEESGRSIFEMTGSERDKKAEAEFEEFVDYLLSLEEEE >gi|299857022|gb|ADWS01000042.1| GENE 46 36986 - 37738 221 250 aa, chain - ## HITS:1 COG:no KEGG:EpC_01800 NR:ns ## KEGG: EpC_01800 # Name: not_defined # Def: conserved uncharacterized protein # Organism: E.pyrifoliae # Pathway: not_defined # 30 246 1 217 231 234 51.0 2e-60 MAPTLERTYSKNLYEFPHRGETRVSRFGYLINEASLFKISEITIIEPDDDICLYILMEKV GARDQGELMDFILDRGEDGMSDSDIIQAILRSDMLDQSRNTIAGRIALREYTFIEDGVEI DCYQIAGVETERAIRQRGLCNLTYRFLLHWYEHLVCDYNQTIPGAKIWAGPLMRTGDVRI YNAKTETFEDVLGEYGMGKETGFLPWNRGLLLDPELSSWFPNKVQVNVEKFIVLIISRKT RTPVGLYLKD >gi|299857022|gb|ADWS01000042.1| GENE 47 37723 - 38106 168 127 aa, chain - ## HITS:1 COG:no KEGG:EpC_01790 NR:ns ## KEGG: EpC_01790 # Name: not_defined # Def: conserved uncharacterized protein # Organism: E.pyrifoliae # Pathway: not_defined # 2 127 5 130 130 154 63.0 1e-36 MLNEKRSIQTIRDCTSVIATHVLNKRKLEVRKLNNDATAPKDTRFIVTFKDDVENAGASV KPLAEAIFLNDRVRFIVKPAKQYPELARFSDQFSEIIESAIRRFLNTHGSIVSNTTADGT ALRWHLH >gi|299857022|gb|ADWS01000042.1| GENE 48 38435 - 38686 247 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293411908|ref|ZP_06654633.1| ## NR: gi|293411908|ref|ZP_06654633.1| conserved hypothetical protein [Escherichia coli B354] # 1 83 1 83 83 135 96.0 1e-30 MLGSLMTKLKVALITLAAVLFVLVGAYTMGGNAARRAIEEKAKQEDRKRLQSTLDVKNET LDELRSKDASTVHHELHNKWLRD >gi|299857022|gb|ADWS01000042.1| GENE 49 38688 - 39032 248 114 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0049c NR:ns ## KEGG: HCM2.0049c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 114 117 230 230 207 95.0 1e-52 VIRHENGRGPLKTLNTWYAAEVIEEGLRRAGVVKPVKTVKAVPVTKETAGATVTAGIGLA QLADVMPQVSAAMDKAQGHISSGDTVRIIFGIATIVVAGFIAWSQVRKHQKGMV Prediction of potential genes in microbial genomes Time: Sun May 15 22:48:38 2011 Seq name: gi|299857021|gb|ADWS01000043.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont42.1, whole genome shotgun sequence Length of sequence - 36711 bp Number of predicted genes - 32, with homology - 32 Number of transcription units - 14, operones - 9 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 190 - 320 98.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. + Prom 540 - 599 2.8 1 1 Op 1 6/0.250 + CDS 622 - 1650 777 ## COG0812 UDP-N-acetylmuramate dehydrogenase 2 1 Op 2 . + CDS 1647 - 2612 748 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase - Term 2604 - 2634 3.0 3 2 Tu 1 . - CDS 2641 - 3567 868 ## COG1072 Panthothenate kinase - Prom 3758 - 3817 3.2 + Prom 3266 - 3325 2.1 4 3 Tu 1 . + CDS 3574 - 3768 61 ## EcSMS35_4423 hypothetical protein + TRNA 3953 - 4028 91.8 # Thr TGT 0 0 + TRNA 4037 - 4121 67.6 # Tyr GTA 0 0 + TRNA 4238 - 4312 64.8 # Gly TCC 0 0 + TRNA 4319 - 4394 94.8 # Thr GGT 0 0 + Prom 4339 - 4398 60.4 5 4 Op 1 14/0.000 + CDS 4509 - 5693 1638 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 5719 - 5766 8.9 + Prom 5784 - 5843 6.0 6 4 Op 2 46/0.000 + CDS 5923 - 6306 422 ## COG0690 Preprotein translocase subunit SecE 7 4 Op 3 45/0.000 + CDS 6308 - 6853 681 ## COG0250 Transcription antiterminator + Term 6887 - 6939 10.2 + Prom 6861 - 6920 6.1 8 5 Op 1 55/0.000 + CDS 7012 - 7440 705 ## PROTEIN SUPPORTED gi|15804573|ref|NP_290614.1| 50S ribosomal protein L11 9 5 Op 2 43/0.000 + CDS 7444 - 8148 1148 ## PROTEIN SUPPORTED gi|15804574|ref|NP_290615.1| 50S ribosomal protein L1 10 5 Op 3 47/0.000 + CDS 8561 - 9058 798 ## PROTEIN SUPPORTED gi|15804575|ref|NP_290616.1| 50S ribosomal protein L10 11 5 Op 4 28/0.000 + CDS 9125 - 9490 562 ## PROTEIN SUPPORTED gi|15804576|ref|NP_290617.1| 50S ribosomal protein L7/L12 + Term 9501 - 9549 8.6 + Prom 9594 - 9653 2.6 12 6 Op 1 58/0.000 + CDS 9810 - 13838 4095 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 + Term 13858 - 13897 8.9 13 6 Op 2 . + CDS 13915 - 18138 4785 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 18165 - 18190 -0.5 + Prom 18169 - 18228 4.2 14 7 Tu 1 . + CDS 18351 - 18890 199 ## B21_03818 hypothetical protein + Term 19025 - 19065 5.6 - Term 19143 - 19187 4.3 15 8 Op 1 5/0.500 - CDS 19300 - 20433 1013 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 16 8 Op 2 16/0.000 - CDS 20430 - 21200 718 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 17 8 Op 3 5/0.500 - CDS 21202 - 21402 234 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 18 8 Op 4 3/0.750 - CDS 21386 - 22141 710 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 19 8 Op 5 8/0.000 - CDS 22134 - 22769 660 ## COG0352 Thiamine monophosphate synthase 20 8 Op 6 4/0.750 - CDS 22769 - 24664 2027 ## COG0422 Thiamine biosynthesis protein ThiC - Prom 24833 - 24892 3.5 - Term 24833 - 24861 -0.7 21 9 Tu 1 . - CDS 24896 - 25372 489 ## COG3160 Regulator of sigma D - Prom 25426 - 25485 3.2 + Prom 25189 - 25248 2.8 22 10 Op 1 5/0.500 + CDS 25467 - 26240 529 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 23 10 Op 2 4/0.750 + CDS 26280 - 27344 1111 ## COG0407 Uroporphyrinogen-III decarboxylase 24 10 Op 3 4/0.750 + CDS 27354 - 28025 562 ## COG1515 Deoxyinosine 3'endonuclease (endonuclease V) 25 10 Op 4 6/0.250 + CDS 28068 - 28658 567 ## COG3068 Uncharacterized protein conserved in bacteria + Prom 28681 - 28740 1.8 26 11 Op 1 . + CDS 28845 - 29117 442 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 29145 - 29178 3.8 27 11 Op 2 . + CDS 29190 - 29825 378 ## c4958 hypothetical protein + Term 30055 - 30089 -0.7 28 12 Tu 1 . - CDS 29827 - 30252 402 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 30330 - 30389 2.0 + Prom 30281 - 30340 3.5 29 13 Op 1 13/0.000 + CDS 30499 - 31866 1130 ## COG0642 Signal transduction histidine kinase 30 13 Op 2 . + CDS 31863 - 33188 1298 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Term 33364 - 33397 -1.0 - Term 33100 - 33139 1.1 31 14 Op 1 17/0.000 - CDS 33185 - 34474 1554 ## COG0151 Phosphoribosylamine-glycine ligase 32 14 Op 2 . - CDS 34486 - 36075 1741 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) - Prom 36170 - 36229 3.6 Predicted protein(s) >gi|299857021|gb|ADWS01000043.1| GENE 1 622 - 1650 777 342 aa, chain + ## HITS:1 COG:ECs4899 KEGG:ns NR:ns ## COG: ECs4899 COG0812 # Protein_GI_number: 15834153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 710 98.0 0 MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLEDYRG TVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQ NIGAYGVELQRVCAYVDCVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRL PKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKLPDPKVNGNAGSFFKNPVVSAET AKALLAQFPTAPNYPQAGGSVKLAAGWLIDQCQLKGMQMGGAAVHRQQALVLINEDNAKS EDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGEVSAVETIS >gi|299857021|gb|ADWS01000043.1| GENE 2 1647 - 2612 748 321 aa, chain + ## HITS:1 COG:ECs4900_2 KEGG:ns NR:ns ## COG: ECs4900_2 COG0340 # Protein_GI_number: 15834154 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Escherichia coli O157:H7 # 77 321 1 245 245 469 99.0 1e-132 MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSL PEPIQLLNAEQILGQLDGGSVAVLPVIDSTNQYLLDRIGELKSGDACVAEYQQAGRGRRG RKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQ DRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESVVNQGWITLQEAGINLDRNTLAA MLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLL EQDGIIKPWMGGEISLRSAEK >gi|299857021|gb|ADWS01000043.1| GENE 3 2641 - 3567 868 308 aa, chain - ## HITS:1 COG:ZcoaA KEGG:ns NR:ns ## COG: ZcoaA COG1072 # Protein_GI_number: 15804568 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 308 1 308 308 623 100.0 1e-178 MTPYLQFDRNQWAALRDSVPMTLSEDEIARLKGINEDLSLEEVAEIYLPLSRLLNFYISS NLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDG FLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDK TVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRFLKFR EGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILTKSANHA VEEVRLRK >gi|299857021|gb|ADWS01000043.1| GENE 4 3574 - 3768 61 64 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_4423 NR:ns ## KEGG: EcSMS35_4423 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 64 1 64 64 120 98.0 2e-26 MLFYTHKHVSGGHSSIGKAIFAMARHSSVEWVNGQEGNTRWGGIIRKNLCQEAIVEKQCD RYSI >gi|299857021|gb|ADWS01000043.1| GENE 5 4509 - 5693 1638 394 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 406 407 635 77 0.0 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARG ITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHI LLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALE GDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVG EEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIK PHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMV VTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLS >gi|299857021|gb|ADWS01000043.1| GENE 6 5923 - 6306 422 127 aa, chain + ## HITS:1 COG:STM4147 KEGG:ns NR:ns ## COG: STM4147 COG0690 # Protein_GI_number: 16767401 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Salmonella typhimurium LT2 # 1 127 1 127 127 184 96.0 4e-47 MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLRALAVVILIAAAGGVAL LTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVS FITGLRF >gi|299857021|gb|ADWS01000043.1| GENE 7 6308 - 6853 681 181 aa, chain + ## HITS:1 COG:ECs4905 KEGG:ns NR:ns ## COG: ECs4905 COG0250 # Protein_GI_number: 15834159 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Escherichia coli O157:H7 # 1 181 1 181 181 348 100.0 3e-96 MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKS ERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGD KPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEK A >gi|299857021|gb|ADWS01000043.1| GENE 8 7012 - 7440 705 142 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804573|ref|NP_290614.1| 50S ribosomal protein L11 [Escherichia coli O157:H7 EDL933] # 1 142 1 142 142 276 100 2e-73 MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVIT VYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGA DIEAMTRSIEGTARSMGLVVED >gi|299857021|gb|ADWS01000043.1| GENE 9 7444 - 8148 1148 234 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804574|ref|NP_290615.1| 50S ribosomal protein L1 [Escherichia coli O157:H7 EDL933] # 1 234 1 234 234 446 100 1e-125 MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVR GATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDA MRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDF DADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLSASVN >gi|299857021|gb|ADWS01000043.1| GENE 10 8561 - 9058 798 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804575|ref|NP_290616.1| 50S ribosomal protein L10 [Escherichia coli O157:H7 EDL933] # 1 165 1 165 165 311 100 3e-84 MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLL RRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPA SQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDAKEAA >gi|299857021|gb|ADWS01000043.1| GENE 11 9125 - 9490 562 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804576|ref|NP_290617.1| 50S ribosomal protein L7/L12 [Escherichia coli O157:H7 EDL933] # 1 121 1 121 121 221 100 6e-57 MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILK AAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEV K >gi|299857021|gb|ADWS01000043.1| GENE 12 9810 - 13838 4095 1342 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 2 1342 6 1390 1392 1582 58 0.0 MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQME LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIAGKVVAKD YIDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRL SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGIL SKDDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT DEIHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR GGVVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL SEELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK LREFIQRAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLK LGDLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP ESFNVLLKEIRSLGINIELEDE >gi|299857021|gb|ADWS01000043.1| GENE 13 13915 - 18138 4785 1407 aa, chain + ## HITS:1 COG:ECs4911 KEGG:ns NR:ns ## COG: ECs4911 COG0086 # Protein_GI_number: 15834165 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Escherichia coli O157:H7 # 1 1407 1 1407 1407 2776 100.0 0 MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKM GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERLYRSG LASLHARVKVRITEYEKDANGELVAKTSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKA ISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFN SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVL GRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYG RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL SNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANW DPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKI VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR VADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE GERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM LRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFI SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEAPA APQVTAEDASASLAELLNAGLGGSDNE >gi|299857021|gb|ADWS01000043.1| GENE 14 18351 - 18890 199 179 aa, chain + ## HITS:1 COG:no KEGG:B21_03818 NR:ns ## KEGG: B21_03818 # Name: htrC # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 179 1 179 179 347 100.0 1e-94 MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYRFWVTYSLHCFTKDYEH QTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPESNVIHAGYGSYAVIEVDLD GGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVKFFTIAYNLLRNKQLPQPSK >gi|299857021|gb|ADWS01000043.1| GENE 15 19300 - 20433 1013 377 aa, chain - ## HITS:1 COG:ECs4913 KEGG:ns NR:ns ## COG: ECs4913 COG1060 # Protein_GI_number: 15834167 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 762 98.0 0 MKTFSDRWRQLDWDDIRLRINGKTAVDVERALNASQFTRDDMMALLSPAASGYLEQLAQR AQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREM GFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQPLAETEYAELKQLGLDGVMV YQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDNWRVDCYMVA EHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQTICAFRLLAPEIELSLST RESPWFRDRVIPLAINNVSAFSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQ PVWKDWDSYLGRASQRL >gi|299857021|gb|ADWS01000043.1| GENE 16 20430 - 21200 718 256 aa, chain - ## HITS:1 COG:thiG KEGG:ns NR:ns ## COG: thiG COG2022 # Protein_GI_number: 16131821 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Escherichia coli K12 # 1 256 26 281 281 469 99.0 1e-132 MLRIADKTFDSHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKRVDLRQHNDAILEPLIA AGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAEMLV QQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVV DAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAKAFRLAVEAGLLARQSGPGSRSH FAHATSPLTGFLEASA >gi|299857021|gb|ADWS01000043.1| GENE 17 21202 - 21402 234 66 aa, chain - ## HITS:1 COG:ZthiS KEGG:ns NR:ns ## COG: ZthiS COG2104 # Protein_GI_number: 15804582 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Escherichia coli O157:H7 EDL933 # 1 66 1 66 66 92 96.0 2e-19 MQILFNDQPMQCAAGQTVHELLEQLDQRQAGAALAINQQIVPREQWTQHIVQDGDQILLF QVIAGG >gi|299857021|gb|ADWS01000043.1| GENE 18 21386 - 22141 710 251 aa, chain - ## HITS:1 COG:thiF KEGG:ns NR:ns ## COG: thiF COG0476 # Protein_GI_number: 16131822 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Escherichia coli K12 # 7 251 1 245 245 443 99.0 1e-124 MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADD DDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARAD VVLDCTDNMATRQEINAACVVLNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEP ERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGC PVCGGSNADPV >gi|299857021|gb|ADWS01000043.1| GENE 19 22134 - 22769 660 211 aa, chain - ## HITS:1 COG:ECs4916 KEGG:ns NR:ns ## COG: ECs4916 COG0352 # Protein_GI_number: 15834170 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 395 99.0 1e-110 MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGR RYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAGLRLGVSTHDDMEIDVALA ARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYPTVAIGGISLARAPAVIATGV GSIAVVSAITQAADWRLATAQLLEIAGVGDE >gi|299857021|gb|ADWS01000043.1| GENE 20 22769 - 24664 2027 631 aa, chain - ## HITS:1 COG:thiC KEGG:ns NR:ns ## COG: thiC COG0422 # Protein_GI_number: 16131824 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Escherichia coli K12 # 1 631 1 631 631 1308 99.0 0 MSATKLTRREQRAHAQHFIDTLEGTAFPNSKRIYITGTHPGVRVPMREIQLSPTLIGGSK EQPQYEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWIDARGDTEELTVRSSDYTKA RLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITPEMEFIAIRENMGRERIRSEV LRHQHPGMSFGARLPENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL EKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA KWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELT KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY AATQTIEMGMADMSENFRARGGEIYLRKEEA >gi|299857021|gb|ADWS01000043.1| GENE 21 24896 - 25372 489 158 aa, chain - ## HITS:1 COG:ECs4918 KEGG:ns NR:ns ## COG: ECs4918 COG3160 # Protein_GI_number: 15834172 # Func_class: K Transcription # Function: Regulator of sigma D # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 305 100.0 3e-83 MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQS LVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNY LEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA >gi|299857021|gb|ADWS01000043.1| GENE 22 25467 - 26240 529 257 aa, chain + ## HITS:1 COG:yjaD KEGG:ns NR:ns ## COG: yjaD COG2816 # Protein_GI_number: 16131826 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Escherichia coli K12 # 1 257 1 257 257 531 99.0 1e-151 MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQ RRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCR ERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESG IKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTV ARRLIEDTVAMCRAEYE >gi|299857021|gb|ADWS01000043.1| GENE 23 26280 - 27344 1111 354 aa, chain + ## HITS:1 COG:hemE KEGG:ns NR:ns ## COG: hemE COG0407 # Protein_GI_number: 16131827 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Escherichia coli K12 # 1 354 1 354 354 736 100.0 0 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHA LLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDG RRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRLSEQYHR >gi|299857021|gb|ADWS01000043.1| GENE 24 27354 - 28025 562 223 aa, chain + ## HITS:1 COG:nfi KEGG:ns NR:ns ## COG: nfi COG1515 # Protein_GI_number: 16131828 # Func_class: L Replication, recombination and repair # Function: Deoxyinosine 3'endonuclease (endonuclease V) # Organism: Escherichia coli K12 # 1 223 3 225 225 442 100.0 1e-124 MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEVTRAAMVLLKYPSLELV EYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFVDGHGISHPRRLGVASHFG LLVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLAWVWRSKARCNPLFIATGHRV SVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRYTANQP >gi|299857021|gb|ADWS01000043.1| GENE 25 28068 - 28658 567 196 aa, chain + ## HITS:1 COG:yjaG KEGG:ns NR:ns ## COG: yjaG COG3068 # Protein_GI_number: 16131829 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 196 1 196 196 384 99.0 1e-107 MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLT VKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVS KTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRA DLREAGDSNIGIIFQQ >gi|299857021|gb|ADWS01000043.1| GENE 26 28845 - 29117 442 90 aa, chain + ## HITS:1 COG:STM4170 KEGG:ns NR:ns ## COG: STM4170 COG0776 # Protein_GI_number: 16767424 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Salmonella typhimurium LT2 # 1 90 1 90 90 135 98.0 1e-32 MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG RNPQTGKEIKIAAANVPAFVSGKALKDAVK >gi|299857021|gb|ADWS01000043.1| GENE 27 29190 - 29825 378 211 aa, chain + ## HITS:1 COG:no KEGG:c4958 NR:ns ## KEGG: c4958 # Name: yjaH # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 211 23 233 233 416 99.0 1e-115 MLAGALLLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTR EYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRA DQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDV SVAWLEAPEGSQLLLVANSDFCRWQPNEKTF >gi|299857021|gb|ADWS01000043.1| GENE 28 29827 - 30252 402 141 aa, chain - ## HITS:1 COG:ECs4925 KEGG:ns NR:ns ## COG: ECs4925 COG3678 # Protein_GI_number: 15834179 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli O157:H7 # 1 141 48 188 188 219 100.0 1e-57 MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHNDFYAQSS ALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMAEAGIPRG AGMGMGYGGCGGGGHMGMGHW >gi|299857021|gb|ADWS01000043.1| GENE 29 30499 - 31866 1130 455 aa, chain + ## HITS:1 COG:ECs4926 KEGG:ns NR:ns ## COG: ECs4926 COG0642 # Protein_GI_number: 15834180 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 455 4 458 458 860 98.0 0 MQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAAARQTLLEKGSVLIRALESG SRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTIVMHSNSGMVGKQLYSPQEMQQ LHPGDEEAWRRIDSADGEPVLEIYRQFQPMFAAGMHRMRHMQQYAATPQAIFIAFDASNI VSAEDREQRNTLIILFALATVLLASVLSFFWYRRYLRSRQLLQDEMKRKEKLVALGHLAA GVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKPTHL ALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRLTQVLLNLYLNAIQ AIGQHGVISVTVSESGAGVKISVTDSGKGIAADQLEAIFTPYFTTKAEGTGLGLAVVHNI VEQHGGTIQVASQEGKGSTFTLWLPVNITRKDPQG >gi|299857021|gb|ADWS01000043.1| GENE 30 31863 - 33188 1298 441 aa, chain + ## HITS:1 COG:hydG KEGG:ns NR:ns ## COG: hydG COG2204 # Protein_GI_number: 16131834 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 1 441 1 441 441 835 99.0 0 MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMA EMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKA LAHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVAR AIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLD EIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYY RLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRE LENAVERAVVLLTGEYISERELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGN KTEAARQLGITRKTLLAKLSR >gi|299857021|gb|ADWS01000043.1| GENE 31 33185 - 34474 1554 429 aa, chain - ## HITS:1 COG:ECs4928 KEGG:ns NR:ns ## COG: ECs4928 COG0151 # Protein_GI_number: 15834182 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Escherichia coli O157:H7 # 1 429 1 429 429 847 98.0 0 MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQNVAIGVTDIPALLDFA QNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLEGSKAFTKDFLARHKIPTA EYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMTLEEAEAAVHDMLAGNAFGDA GHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTGGMGAYSPAPVVT DEVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKVIEFNCRFGDPETQPIM LRMKSDLVELCLAACEGKLDEKTSEWDERASLGVVMAAGGYPGDYRTGDVIHGLPLEEVE DGKVFHAGTKLADDEQVVTSGGRVLCVTALGHTVAEAQKRAYALMTDIHWDDCFCRKDIG WRAIEREQN >gi|299857021|gb|ADWS01000043.1| GENE 32 34486 - 36075 1741 529 aa, chain - ## HITS:1 COG:ECs4929 KEGG:ns NR:ns ## COG: ECs4929 COG0138 # Protein_GI_number: 15834183 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Escherichia coli O157:H7 # 1 529 1 529 529 1031 99.0 0 MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLLAEKGLPVTEVSDYTGF PEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVVVNLYPFAQTVAREGCSLE DAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEMDDNEGSLTLATRFDLAIKAF EHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNLNFIKKQDMRYGENSHQQAAFYI EENVKEASVATATQVQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGNSI LDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAIISRQFVEVIIAPSASEEALKITAAKQ NVRVLTCGQWGERVPGLDFKRVNGGLLVQDRDLGMVGAEELRVVTQRQPTEQELRDALFC WKVAKFVKSNAIVYAKNNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSSMASDAFFP FRDGIDAAAAAGVTCVIQPGGSIRDDEVIAAADEHGIAMLFTDMRHFRH Prediction of potential genes in microbial genomes Time: Sun May 15 22:48:56 2011 Seq name: gi|299857020|gb|ADWS01000044.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont43.1, whole genome shotgun sequence Length of sequence - 34962 bp Number of predicted genes - 45, with homology - 36 Number of transcription units - 18, operones - 12 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 2107 1280 ## COG0550 Topoisomerase IA 2 1 Op 2 . - CDS 2111 - 3373 375 ## COG0464 ATPases of the AAA+ class - Term 3385 - 3432 -0.5 3 1 Op 3 . - CDS 3456 - 3950 374 ## COG1525 Micrococcal nuclease (thermonuclease) homologs 4 1 Op 4 . - CDS 3947 - 4273 200 ## SbBS512_0051 hypothetical protein - Term 4284 - 4329 9.2 5 1 Op 5 . - CDS 4359 - 4673 114 ## SeSA_B0118 killer protein - Prom 4916 - 4975 5.1 6 2 Op 1 6/0.000 - CDS 5150 - 6985 1458 ## COG3505 Type IV secretory pathway, VirD4 components 7 2 Op 2 . - CDS 6988 - 8022 235 ## COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 8 2 Op 3 . - CDS 8019 - 8186 108 ## 9 2 Op 4 11/0.000 - CDS 8218 - 9432 576 ## COG2948 Type IV secretory pathway, VirB10 components 10 2 Op 5 8/0.000 - CDS 9429 - 10358 584 ## COG3504 Type IV secretory pathway, VirB9 components 11 2 Op 6 . - CDS 10364 - 11092 490 ## COG3736 Type IV secretory pathway, component VirB8 - Term 11169 - 11197 -0.9 12 3 Op 1 . - CDS 11287 - 12342 572 ## SeD_B0099 pilx6 protein 13 3 Op 2 . - CDS 12354 - 12611 153 ## SbBS512_0033 Eex protein 14 3 Op 3 . - CDS 12621 - 13391 785 ## SeD_B0101 pilx5 protein 15 3 Op 4 . - CDS 13401 - 16154 1264 ## COG3451 Type IV secretory pathway, VirB4 components 16 3 Op 5 . - CDS 16179 - 16469 314 ## p2ECUMN_0031 putative Pilx2 protein 17 3 Op 6 . - CDS 16453 - 16797 103 ## SeD_B0104 pilx1 protein - Prom 16980 - 17039 1.5 18 4 Tu 1 . - CDS 17143 - 17379 157 ## p2ECUMN_0033 hypothetical protein 19 5 Op 1 . - CDS 18191 - 19351 692 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) 20 5 Op 2 . - CDS 19354 - 19899 158 ## SeD_B0107 hypothetical protein - Term 20178 - 20218 8.5 21 6 Op 1 . - CDS 20240 - 20497 64 ## p2ECUMN_0038 hypothetical protein 22 6 Op 2 . - CDS 20494 - 20658 137 ## p2ECUMN_0039 hypothetical protein 23 6 Op 3 . - CDS 20733 - 21071 213 ## 24 6 Op 4 . - CDS 21165 - 21407 226 ## SeD_B0112 YajA protein 25 6 Op 5 . - CDS 21397 - 21666 279 ## gi|268318514|ref|YP_003292214.1| hypothetical protein pMAS2027_54 26 6 Op 6 . - CDS 21675 - 22226 285 ## ROD_p2071 hypothetical protein - Term 22244 - 22275 1.0 27 7 Op 1 . - CDS 22286 - 22522 187 ## 28 7 Op 2 . - CDS 22581 - 23096 451 ## SbBS512_0018 DnaJ domain protein - Prom 23154 - 23213 5.5 + Prom 24467 - 24526 5.2 29 8 Op 1 . + CDS 24590 - 25462 222 ## p2ECUMN_0001 PI protein (replication initiation protein) 30 8 Op 2 . + CDS 25471 - 25914 247 ## p2ECUMN_0002 hypothetical protein; putative membrane protein + Prom 25918 - 25977 2.8 31 9 Tu 1 . + CDS 26102 - 26455 240 ## SeD_B0122 hypothetical protein - Term 26311 - 26341 -0.5 32 10 Op 1 . - CDS 26476 - 26760 221 ## 33 10 Op 2 . - CDS 26796 - 27107 208 ## - Prom 27198 - 27257 1.9 34 11 Op 1 . - CDS 27313 - 27597 146 ## ETA_pET490490 stability/partitioning determinant - Prom 27629 - 27688 7.6 35 11 Op 2 . - CDS 27697 - 28359 587 ## COG1192 ATPases involved in chromosome partitioning - Prom 28454 - 28513 4.3 + Prom 28555 - 28614 6.9 36 12 Op 1 . + CDS 28740 - 29402 228 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 29422 - 29463 -0.0 + Prom 29404 - 29463 4.1 37 12 Op 2 . + CDS 29489 - 29728 212 ## SPAB_00769 hypothetical protein - Term 30193 - 30229 6.2 38 13 Tu 1 . - CDS 30251 - 30346 83 ## - Prom 30553 - 30612 6.0 - Term 31071 - 31114 3.1 39 14 Tu 1 . - CDS 31151 - 31429 226 ## - Prom 31553 - 31612 2.4 40 15 Tu 1 . - CDS 31719 - 31973 271 ## - Term 32018 - 32055 -0.8 41 16 Op 1 . - CDS 32083 - 32904 427 ## Aave_2747 zinc metalloproteinase Mpr protein 42 16 Op 2 . - CDS 32901 - 33080 90 ## - Prom 33114 - 33173 5.5 + Prom 33148 - 33207 2.6 43 17 Tu 1 . + CDS 33353 - 34003 198 ## COG0727 Predicted Fe-S-cluster oxidoreductase + Term 34010 - 34044 6.0 - Term 33998 - 34032 5.2 44 18 Op 1 . - CDS 34041 - 34496 495 ## COG2916 DNA-binding protein H-NS 45 18 Op 2 . - CDS 34508 - 34780 143 ## ECH74115_A0022 DNA topoisomerase III (EC:5.99.1.2) - Prom 34875 - 34934 3.8 Predicted protein(s) >gi|299857020|gb|ADWS01000044.1| GENE 1 1 - 2107 1280 702 aa, chain - ## HITS:1 COG:ECs2469 KEGG:ns NR:ns ## COG: ECs2469 COG0550 # Protein_GI_number: 15831723 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Escherichia coli O157:H7 # 1 627 1 611 653 420 40.0 1e-117 MRLFIAEKPSLAKAIFEGLGGNPNTEKKNGYFEHGSDVVTWCYGHMLELYDPQDYDDKYS NWRYSDLPIKAVYPPKYKIKPESEAQTRIILSLIDKADSIVHSGDPDDEGCLLVDEILGY AGNKKPVQRLLVADLNLAPVQKSLSNLQPNDKFRGMTLSALARSLCDQGFGYNMTRGCTL KGREKGYNGVLNVGRVQSAVLGLVNMRTLANQNHTESFYYDVFASLSMNGHQIKAKYQTT DDDQIDEKKRLISEAQAAHIAGRVTGKDAIVTIATTKPENSKPPLPLNLSTLQQLCAKRF GYSAKDTLDVMQGLYETHKLLTYPRSDNRYLSDEHYYQAGDIATAIAATVPELASAIVDM DKGQKHKAFNASKIEAHHAIIPTTKSGAGIQLNEKERNVYNLVSVYFIGLFYPDAIRNKT KIHFDIKGDTFTATQSVLVQKGWEALGKDSDDEDETEDAGTDGFDLSLLKFNDSGLCESA DVDKKKTTPPRYFTESTLLAAMTSAAKFIDDPALRKALEAKDEGSSDRGSIGTEATRAGI LEKLAANTGLISIEKEKGYSELVWKTTKQGQEFCAALPPEITKPDISALWAEKQSQIKAG ELTVEEFIKENDEYVQGLIDELDRNGISISSNATPCPVCNNGFLRKRKGQNGFFWGCSCY PECKTTFPDKDGKPDMEAKSRSEGSMSRLEAPCPSCSKEIII >gi|299857020|gb|ADWS01000044.1| GENE 2 2111 - 3373 375 420 aa, chain - ## HITS:1 COG:YDL126c KEGG:ns NR:ns ## COG: YDL126c COG0464 # Protein_GI_number: 6320077 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Saccharomyces cerevisiae # 161 403 496 730 835 76 28.0 1e-13 MGKLTLVEQALRLHKEYYGEDNFGTVVKDCDYYPKVAEIFINRKNRKIYSNLDIEPVAST VVHTGSSPVMAKAGRIKKLMFKDGSGAYRIHLGQNEVVHIIRFILNSKVRMEYAVGTTKS MSMLHNLCEAGRAKLNRSLPRKGIWKIGCYDGVYYHGKARKEEIENALRFSVHPKFNELE NDFNQFFSDIDFYTRYGQSGMRKVLFTGPPGTGKTTIAKALGAKYQDKYVFVYADDYFKD VCYAAAQKKIPVIIIAEEVDELYRADAGTLSFLDGADTPRNLAGTYVIFSTNYPNRIDPR IRKRPGRIDRIISVGAFRTKAAAACAKMYLPDDINIDLKELGAVLDRTTPAEIKEIINIA IGMIRGTKNELTVDVIKNARAFLKGTLDLSVQEAEEDIEEREEIFKKNGAQPDYSSYLED >gi|299857020|gb|ADWS01000044.1| GENE 3 3456 - 3950 374 164 aa, chain - ## HITS:1 COG:Cj0979c KEGG:ns NR:ns ## COG: Cj0979c COG1525 # Protein_GI_number: 15792306 # Func_class: L Replication, recombination and repair # Function: Micrococcal nuclease (thermonuclease) homologs # Organism: Campylobacter jejuni # 2 160 19 170 175 102 37.0 3e-22 MRHFFNVLSFAVALLPATLCAAQIQGKVIRVLDGDTIEVKTLPAKIVVYEVPIRVRLINI DAPEKKQPFGRWSTNQLKALLAGQSVTVSYTQTDRYGRVLGRVVTANGTEANRQQVLKGA AWVYDRYNTDNSLPALQREAQTQKRGLWADSNPVPPWEWRHKQN >gi|299857020|gb|ADWS01000044.1| GENE 4 3947 - 4273 200 108 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_0051 NR:ns ## KEGG: SbBS512_0051 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 12 108 1 97 97 123 83.0 2e-27 MKIINVPDARSVRIAGIEIIDSVKSVASVFTEILLFMVWFPAIVYGLYRFVIVLWDVSLK PQSLIEFINFMVELYSYVLPSLAVIAVALVVVLSIFKRLSAIWEGRKQ >gi|299857020|gb|ADWS01000044.1| GENE 5 4359 - 4673 114 104 aa, chain - ## HITS:1 COG:no KEGG:SeSA_B0118 NR:ns ## KEGG: SeSA_B0118 # Name: not_defined # Def: killer protein # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 104 1 105 105 132 68.0 5e-30 MKKTVTTAVLLCAFAAGTAHAEEKADPNDPCAMVLCLAGKLDGSSPAECDPMYKSFMSIR KKNKHGFLPDHTADARKKKLNECPAADAGTVSKIISSFGRLKNF >gi|299857020|gb|ADWS01000044.1| GENE 6 5150 - 6985 1458 611 aa, chain - ## HITS:1 COG:XFa0016 KEGG:ns NR:ns ## COG: XFa0016 COG3505 # Protein_GI_number: 10956727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Xylella fastidiosa 9a5c # 72 588 57 556 656 244 31.0 5e-64 MSLKLPDKGQWAFIGLVMCLVTYYTGSVAVYFLNGKTPLYIWKNFDSMLLWRIITESNIR TDIRLTAIPSLLSGMVSSLIVPVFIIWQLNKTDVALYGDAKFASDNDLRKSKLLKWEKEN DTDILVGAYKGKYLWYTAPDFVSLGAGTRAGKGAAIGIPNLLVRKHSLIALDPKQELWKI TSKVREKLLGNKVYLLDPFNSKTHQFNPLFYIDLKEESGAKDLLKLIEILFPSYGLTGAE AHFNNLAGQYWTGLAKLLHFFINYDPSWLGEFGLKPVFSIGSVVDLYSNIDRELILSKRE DLEGTKGLDENALYHLRDALTKIREYHETEDEQRSSIDGSFRKKMSLFYLPTVRKCTDGN DFDLRQLRREDITVYVGVNAEDMSLAYDFLNLFFNFVVEVTLRENPDFDPTLKHDCLMFL DEFPSIGYMPIIKKGSGYIAGFKLKLLTIYQNISQLNEIYGVEGAKTLMSAHPCRIIYAV SEEDDAKKISEKLGYITTKSTGSSKTSGRSTSKSSSESEAQRALVLPQELGTLDFKEEFI ILKGENPVKAEKALYFLDPYFMDRLMMVSPKLTELTASLNKTKKVLGVKGLKYPSKEKML SVGELESEVLL >gi|299857020|gb|ADWS01000044.1| GENE 7 6988 - 8022 235 344 aa, chain - ## HITS:1 COG:SMa1302 KEGG:ns NR:ns ## COG: SMa1302 COG0630 # Protein_GI_number: 16263162 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis # Organism: Sinorhizobium meliloti # 28 331 26 328 329 188 37.0 1e-47 MKDAENRHIVYEIIDEYFHHWLNEVDGLTEIAVNRPDELFVKVSGKWQQHELKMDFKDCM SFAGAISDYHDGGSVTPEYPLRSVTLPGGERVQIVIPPATERETVSITIRKPSSVFIDHD TFVKQGFYSRLNQGGKFRDKEDELSSMFKDNCFEQFVPECLVKGKTMVFCAGTGAGKTTF ANACLQYIPHHLRCISIEDTDEAKFRFHKNHVKLYYPSEGESSTVSSASLLRSGFRMNPD RILMTEVRGAEAWDFLKGSSSGHAGNLTTVHESTPEDAVLGLVQRCYMNPECQNLPYNII LRRVLSNVDVIMSIKYIDEEDNRFASGIYYRDIHFQEYFEKLKE >gi|299857020|gb|ADWS01000044.1| GENE 8 8019 - 8186 108 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLGIRESEIYHHIRKGIPINGVPFPKPLKQIKTHRFNYEEVMRFIEDLKGKGEL >gi|299857020|gb|ADWS01000044.1| GENE 9 8218 - 9432 576 404 aa, chain - ## HITS:1 COG:BMEII0034 KEGG:ns NR:ns ## COG: BMEII0034 COG2948 # Protein_GI_number: 17988378 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB10 components # Organism: Brucella melitensis # 207 398 76 263 265 115 33.0 2e-25 MSEQENKIPTAVEIEQALRERHQKEIEQNDKTDKGDEDDGKSVKRLGIEKLKKSRKGLVI IVAAFLLLAAGVSVYYIPSIIRAMSSGDDKPASNAVSTGSVKRATGLSDDVDPFNTREEP AKTEERKESSGKAETPPEKVQQNFSRALDVAYGGSSSASSNSGGSSSTASNTRNEGDGSD KQAEVQPVNAGQPAQLSKITRVPYDPNLFIPENTAIKCSLDRRFISDLAGKLVCTINEDV YSANRNVKLIEKGTAAYLMYKTGTFNHGQGAVFIAATKLRTRKEPFIDIPLIDTQAAGAL GEAGASGWIDTHFADRFMGAMMVGMIPDVAQAASGAAKSNKDNQTDYTANSRQAFADIAR EAFANSVNIPPTLYKNQGEIITLIVGQDLDFSSIYKLKMVGTRR >gi|299857020|gb|ADWS01000044.1| GENE 10 9429 - 10358 584 309 aa, chain - ## HITS:1 COG:BMEII0033 KEGG:ns NR:ns ## COG: BMEII0033 COG3504 # Protein_GI_number: 17988377 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB9 components # Organism: Brucella melitensis # 46 307 2 239 247 110 28.0 3e-24 MKMNKGALIVALLLVSHVCHAAVTPAASRFDPRNQIVSYNPQNTTVINSAVGYTTTLVFD EDETVISARTGFPQGWEVNKEDNLVYLEVKPVKQTVQKNSTDDNGNQSSEVVSVALDPEN DLERWRTNLFVRTTKRNYSMELNARTFRQPDKIAFVVNYQYPQERRKEQAEIEKKRIEAL NKRQEEQAINRSLENAKSPKNWDYWKRVADGSQSISPDYAYDDGRYTWFGFSPLKKIPSV FVMSGEQETLTNPVVKNSGSFTVVGVPVDQRFVLRMGNQVVGVENRGFGKVRLPAGDTVS PNVEKEVIQ >gi|299857020|gb|ADWS01000044.1| GENE 11 10364 - 11092 490 242 aa, chain - ## HITS:1 COG:BMEII0032 KEGG:ns NR:ns ## COG: BMEII0032 COG3736 # Protein_GI_number: 17988376 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, component VirB8 # Organism: Brucella melitensis # 19 240 22 235 239 85 30.0 1e-16 MGFKLSGLKLPGFNKKKEVTDSSTTFEEKNVLMQEKMNRIYKFGGIAGMAVGVLSLLALN GALPLKSTVVEAYLINGVTGVAERLTSVKKENLSENEALAKYFITQYVKRREGYNYFSLQ HDYDYVLLYSAENVATDYNALINGNQSPKVIYNKAEKTASVQDNPSVIISPSSRRDDKDM GAYIRFKLTIRNVATGQDDYEYWNVRLTYRIEPQVEMASGDRNNNPLKFVVTSYVRDKEV KG >gi|299857020|gb|ADWS01000044.1| GENE 12 11287 - 12342 572 351 aa, chain - ## HITS:1 COG:no KEGG:SeD_B0099 NR:ns ## KEGG: SeD_B0099 # Name: not_defined # Def: pilx6 protein # Organism: S.enterica_Dublin # Pathway: not_defined # 4 351 31 377 377 410 65.0 1e-113 MATSRYFQAAHDVIVKTLDQSLTGQLDNFSSIASQLGKYGISIYILWYAYTTIVGKQKTA VQDFLWNLCRFWLILVFVKNMGGWLDSATQAIDGLKETFAGGDPWKWVDELWEKVQQVAA YLMSKDTSKYVKTDGAIASLLTYAGGIIALLLTSIVYLAAEVTIKILTITAPLFIICLSF GFLRQMFNSWLQLIFSSCFIFLFCGLAIKAGMTFLNGILTISIANADELNLISTGAQAGV AGAFMAWIIWQAKTYASQLAGVGVEGAMQGAAAMGIGAGVFGASRMGRNLLGMGKNAGIG AWKGVRRQDGGFNQSPGVSGKLGNLTGQGVNIGAKRLRQAAIDAAKKKYGG >gi|299857020|gb|ADWS01000044.1| GENE 13 12354 - 12611 153 85 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_0033 NR:ns ## KEGG: SbBS512_0033 # Name: not_defined # Def: Eex protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 64 1 62 71 72 61.0 4e-12 MKKYGLVAALGLTFFLTGCEEVKSVDWWQSHVDDATKKVAECKKSGSDSENCKNAKEGLF RYKQLHPKHVDYKDAFKNVLGKDGS >gi|299857020|gb|ADWS01000044.1| GENE 14 12621 - 13391 785 256 aa, chain - ## HITS:1 COG:no KEGG:SeD_B0101 NR:ns ## KEGG: SeD_B0101 # Name: not_defined # Def: pilx5 protein # Organism: S.enterica_Dublin # Pathway: Bacterial secretion system [PATH:sed03070] # 1 254 1 250 252 345 76.0 9e-94 MKKHIVAALIASVTVISGAQAGVPVAIDANPEWAVEAQRWTERLKQWQDTVNHYQKQINA YKQELLTKTGIRDVQGLVQSAQSVSKELENIYDQGNSFIDDYIKNPEATLSEQARSLLAD YKVTNTCKGLGYTGDLVRGCEASFLSQLAGIEYGNKLESKLREDNQEMADLIDQVKNAQD TKATQDATNAVSLASLKFNKLKFQYEMYRDKQRDLAEYKEKMLQAAFQEKQLGAVNKETP VVDYKAAFEQQSYEMN >gi|299857020|gb|ADWS01000044.1| GENE 15 13401 - 16154 1264 917 aa, chain - ## HITS:1 COG:BMEII0028 KEGG:ns NR:ns ## COG: BMEII0028 COG3451 # Protein_GI_number: 17988372 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Brucella melitensis # 106 913 10 818 831 473 34.0 1e-133 MSTVFKGLTRPALIRGLGVPLYPFLGMCVICVLLGVWIHEAMYALILPGWYAIKRVTKID ERFFDLLYLRMQIKGNPLANKRFNAVHYAGSSYDAVDISKVDNFMKLKDQSSLEELIPYS SHITDNLIVTRNHDLLATWQIDGAYFECVDEADLALLTDQLNTLIRSFDGKPVTFYTHRI RVRKEVRPVFDSKIPFVNRVMNDYYESLSAAEYFENKLYLTVCYKPFSAEDKVTHFLSRK KGNKNIFEEPINDMNEICGRLSTYLSRFHSRRLGLYEENNIVYSEQLTLFQKLLSGRWQK VRVTNSPFYTYLGGKDLFFGNDAGQITASDHARYFRCIEIKDYFQETDAGIFDALMYLPV EYVQTSSFTPIDKQSAIKALDDQIDKLEMTDDAAKSLLADLKVGLDMVSSGYISFGKSHQ TLIVYADSPERLVKDTNIVTTTLEDLGLIVTYSTLSLGAAYFAQLPGNYTLRPRLSSISS LNFAEMESFHNFFTGKEKGNTWGNNLITLGGSGNDIYNLNYHMTTEHQNYFGKNPTLGHT EILGTSNVGKTVVMMTKAFAAQQFGTPESFPPERKLKKLTTVFFDKDRAAEPGIRSMGGA YFRVKEGEPTGWNPAALPPTKRNISFMKDLVRLLCTLNSEPLDDYQNRLISDAVERLMQR SNRSYPISKLRPLILEPDDTETRRHGLKARLNAWVQGGEFGWVFDNPDDTFDVDNLDVFG IDGTEFLDNKVLSSAASFYLIYRVTMLADGRRLLIYMDEFWQWINNEAFRDFVYNKLKTA RKLDMVLVVATQSPDELIKSPIAAAVREQCATHIYLANPKAKRSEYVDELEVRELYFDKI KAIDPLSRQFLVVKNPQRKGESDDFAAFARLDLGKAAYYLPVLSASKPQLELFDEIWKEG MKPEEWLDTYLERANLI >gi|299857020|gb|ADWS01000044.1| GENE 16 16179 - 16469 314 96 aa, chain - ## HITS:1 COG:no KEGG:p2ECUMN_0031 NR:ns ## KEGG: p2ECUMN_0031 # Name: not_defined # Def: putative Pilx2 protein # Organism: E.coli_UMN026 # Pathway: not_defined # 2 96 15 109 109 153 88.0 2e-36 MLKLNKRYLTLSVFMAALMLCVAEPAFADDVSTKTTGFLQKIIDFLTDIRKPAITIIALV IGYIAIFSRQHAAWITPLIIGIIIFIVAPYLPDWLA >gi|299857020|gb|ADWS01000044.1| GENE 17 16453 - 16797 103 114 aa, chain - ## HITS:1 COG:no KEGG:SeD_B0104 NR:ns ## KEGG: SeD_B0104 # Name: not_defined # Def: pilx1 protein # Organism: S.enterica_Dublin # Pathway: Bacterial secretion system [PATH:sed03070] # 1 114 101 213 215 180 75.0 1e-44 MFDPCENLKVSEQILVDCYKRGGDILRGLSCYYSGNPETGTKPESDFNNTSYIQRIGFNP PDNKKNWVVPSVKDAIRKENVTQSIKPKEVTVYPQYAMRGTVLDEKETNDVKTQ >gi|299857020|gb|ADWS01000044.1| GENE 18 17143 - 17379 157 78 aa, chain - ## HITS:1 COG:no KEGG:p2ECUMN_0033 NR:ns ## KEGG: p2ECUMN_0033 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 73 1 73 73 108 95.0 6e-23 MTATRKKTATRRKPQRNTLYLPSASREELDKIALEIGYRRGRRISSSGVVQYLIKKYSSQ AIEELINEDDEDDDDFDD >gi|299857020|gb|ADWS01000044.1| GENE 19 18191 - 19351 692 386 aa, chain - ## HITS:1 COG:XFa0047_1 KEGG:ns NR:ns ## COG: XFa0047_1 COG3843 # Protein_GI_number: 10956757 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Xylella fastidiosa 9a5c # 17 221 10 207 279 75 30.0 1e-13 MGVYVDKEFRVKRKSSEAGRKSAFAHKVKNGGKNYQRNVQERINRKGASKEVVVKISGGA ITRQGVRNSIDYMSRESELPVMSESGQVWKGDEIQEAKEHMIDRANDPQNVFDDKGKENK KVTQNIVFSPPVSAKVKPEDLLESVRKTMHKKYPNHRFVLGYHNDKKEHPHVHVVFRIRD NDGKRADIRKKDLREIRTGFCEELKMKGYDVKATHKQQHGLNQSIKDAHKTAPKRQKGVY EVVDVGYDHYQNDKTKPKQHFIKLKTLNKGVEKTYWGADFGELTTRENVKKGDLVKLKKL GQKEVKIPALDKNGVQHGWKTAHRNEWQLENLGVKGIDRISSSSKELVLNSAEMIKKQQL QMRNFSQIKQSMIQSEQKVKIGIRLG >gi|299857020|gb|ADWS01000044.1| GENE 20 19354 - 19899 158 181 aa, chain - ## HITS:1 COG:no KEGG:SeD_B0107 NR:ns ## KEGG: SeD_B0107 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Dublin # Pathway: not_defined # 1 181 24 204 204 300 83.0 1e-80 MKKVQFRIEESQHDDLLDCLKTLYPDEPGLTVAKGMKLLANALLKSKVKNEDVNVSKDND DFIKTTMYLTGKQRTLIEKAAHRHGWNLSRECRYRIQTTLENELDFFDQELLVMNRCRNA IDKIGRNFHYIIVNDNARVLDKDGFYQDAERLSSEIMSLKSEFENYIMLCKGRTVSNKVE V >gi|299857020|gb|ADWS01000044.1| GENE 21 20240 - 20497 64 85 aa, chain - ## HITS:1 COG:no KEGG:p2ECUMN_0038 NR:ns ## KEGG: p2ECUMN_0038 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 85 1 85 90 119 74.0 5e-26 MKKQEFLDFISAEQRRGAVRFSLGFNSKGEIVLHWTNEAGLRVWSILSGNRGKSPSRANR ERMSNLRRWLHDARQGMEGDTPVAE >gi|299857020|gb|ADWS01000044.1| GENE 22 20494 - 20658 137 54 aa, chain - ## HITS:1 COG:no KEGG:p2ECUMN_0039 NR:ns ## KEGG: p2ECUMN_0039 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 45 17 61 65 70 84.0 2e-11 MSERMLSAIQTVEKGGRPVFPLMPFSAFPEYMALLRKALEKKETKALIEKQEVL >gi|299857020|gb|ADWS01000044.1| GENE 23 20733 - 21071 213 112 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNTYVITFQALNTKKEKITCSAFVHSETLFLAVHSFEDKNRGRGYVITSVSELLSEELTA KNSLKKNINFWFNECGLSKSEVINEVINWKNFAYTLKELEEAKNEAIRELRS >gi|299857020|gb|ADWS01000044.1| GENE 24 21165 - 21407 226 80 aa, chain - ## HITS:1 COG:no KEGG:SeD_B0112 NR:ns ## KEGG: SeD_B0112 # Name: not_defined # Def: YajA protein # Organism: S.enterica_Dublin # Pathway: not_defined # 1 71 1 71 71 84 59.0 1e-15 MSFKPTPEEVKQARIKAGFTQQEAAERFGFTLSAWQAKETSGKTSRGLAAGTYELLLLLA DEHPDYQLVKREKNQDKVTK >gi|299857020|gb|ADWS01000044.1| GENE 25 21397 - 21666 279 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|268318514|ref|YP_003292214.1| ## NR: gi|268318514|ref|YP_003292214.1| hypothetical protein pMAS2027_54 [Escherichia coli] # 1 89 5 93 93 134 94.0 3e-30 MNEVLSDRKNKGNVTYRIVVSEDATRLFIELEKLMKVRSKEADKKTTKKIVFQKSFYYEE FSNVKDEIDDPILLKFYTDTIVKVQNHEF >gi|299857020|gb|ADWS01000044.1| GENE 26 21675 - 22226 285 183 aa, chain - ## HITS:1 COG:no KEGG:ROD_p2071 NR:ns ## KEGG: ROD_p2071 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 6 183 3 180 180 261 67.0 9e-69 MKEQKNFFERYKPVFEIVCRILGNGWRVNLLDDCQYRIKLTSPDFKNYSIHIRMEKGRLV IIGSVDSRSWRSPYHTCTVSPERNPVEIAADIEKKILSDALDNVDMAREYEQQLQQKREK KLILKGMLSRLVHLESWHGTLTGFKVENGLDGNVSERGDGYEMVIRGLSVDQLIKVAGFI KQL >gi|299857020|gb|ADWS01000044.1| GENE 27 22286 - 22522 187 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNKTITEAELINIFESYGAYICPDEIEVTAKECNENGSVLHRGLNAEGWAHLFAKEEAY QQECEAQEAASDDGHFDE >gi|299857020|gb|ADWS01000044.1| GENE 28 22581 - 23096 451 171 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_0018 NR:ns ## KEGG: SbBS512_0018 # Name: not_defined # Def: DnaJ domain protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 171 122 292 292 299 83.0 3e-80 MNIQEALNVFGLSGDLTEKDIKAAYKKAALKYHPDRNPLGAELMKAVNAAFDFLMANIDK INQFQSTDENARYNYGEDLEKVLNTLSGLTGIVYEVIGNWVWISGETKEHKDILKEMGCK WASKKKQWFYRPEEHKSRWNRKEHSIEEIREMYGTAGKRKASGWTRVEASA >gi|299857020|gb|ADWS01000044.1| GENE 29 24590 - 25462 222 290 aa, chain + ## HITS:1 COG:no KEGG:p2ECUMN_0001 NR:ns ## KEGG: p2ECUMN_0001 # Name: not_defined # Def: PI protein (replication initiation protein) # Organism: E.coli_UMN026 # Pathway: not_defined # 5 290 38 333 333 234 46.0 2e-60 MRLIVKTVTGLTKVRHRNEVGVTLASLSLSAKRVLFLALCQIDTKEMLDDDILEVDADFF SKATSLDKYASYAALKEGAKVLSSTTLVLNRDDLKNLADELGILSSKNKIPDRLDLNLTE FCAYYDHLATVRIKFTNTAKRYFSKLIGSENRYTTQVLKSVVLLNSVNSTNLYQVIRKYY SQNSSKKSFDISVDDLKEEMGLYTIEEGEKKYKYPKYSFFVRDVINKSINEIIEKTEINQ LSFSVVGKKGRMAHMLRFEFSINEKSSSFSEDDMAFLEEFDKVVPPKKNK >gi|299857020|gb|ADWS01000044.1| GENE 30 25471 - 25914 247 147 aa, chain + ## HITS:1 COG:no KEGG:p2ECUMN_0002 NR:ns ## KEGG: p2ECUMN_0002 # Name: not_defined # Def: hypothetical protein; putative membrane protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 144 1 144 147 173 59.0 2e-42 MAKIYEFPQGAERSKLKKEIIRERKKRLRETNGNPVIRHAKWFWFYLRLATAGALHLVSV ISLAVLGAFSKAIFWIGGMLCVVTWFHLERQFWTPQNFTIPVIVTLWGLSLFATPLMELL NKKMPWYRLLVPDAKHTSTEATNDDQP >gi|299857020|gb|ADWS01000044.1| GENE 31 26102 - 26455 240 117 aa, chain + ## HITS:1 COG:no KEGG:SeD_B0122 NR:ns ## KEGG: SeD_B0122 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Dublin # Pathway: not_defined # 1 117 24 140 140 166 84.0 2e-40 MKYQVKEFINEKYSKAVNILKDNLKEHYHIFYGLRLSEILFPASEYGSEMFFQEFEAINS VILPLVIFDLIDRKPIMVIGFGEVCGVDSLVDSGIEVVSLDGLSDLLLVEKLTPLFN >gi|299857020|gb|ADWS01000044.1| GENE 32 26476 - 26760 221 94 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKSWLEQQVQNEKLKKVQEEKKDGTIQKGLYRVRIKDKYRWDLWENDFRVVIAYSKDDA ELKFTEMTGFNEHYYIESIEKIVLSDIEKILLEN >gi|299857020|gb|ADWS01000044.1| GENE 33 26796 - 27107 208 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFIFRYIKTLINIYLLYIQPILGMFLIGIGLWGFYAPDEGTCTNLNIELCAVSAIDVLKP AIFVFLGIITVAGWYFTELQPKLRGEGKYMKVKTGVKPEDFVK >gi|299857020|gb|ADWS01000044.1| GENE 34 27313 - 27597 146 94 aa, chain - ## HITS:1 COG:no KEGG:ETA_pET490490 NR:ns ## KEGG: ETA_pET490490 # Name: not_defined # Def: stability/partitioning determinant # Organism: E.tasmaniensis # Pathway: not_defined # 23 93 46 116 116 69 50.0 3e-11 MALKLNRPNIDESQQPATNAETARFISGATRAPVAGKPKLMNFRLPAYFEEILEAEAQRT GQSKTTVLKAALAAFDNLDENLKNHWLLESAKLG >gi|299857020|gb|ADWS01000044.1| GENE 35 27697 - 28359 587 220 aa, chain - ## HITS:1 COG:HP1000 KEGG:ns NR:ns ## COG: HP1000 COG1192 # Protein_GI_number: 15645615 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Helicobacter pylori 26695 # 4 194 2 191 218 71 26.0 1e-12 MGKILLVVSDKGGVGKSTYVANTGSMLVNKGKSVIILKTDKNHDLLSWNEKRTDNGLLTI PVHAAYGNVSNEIKRLSKLCEVLIVDCPGHDSQEFRSALTVSDIVVTLVKPSSDFESETL TSVTEKIRTAQKANAALEPWVLFTRINSAKPRHRKAAIDLDKLLRSDNIWIQPLKTRISE LDVYESACNEGAGVHDVSRASSLSTAKAQIELVAQEIGIL >gi|299857020|gb|ADWS01000044.1| GENE 36 28740 - 29402 228 220 aa, chain + ## HITS:1 COG:AGl1981 KEGG:ns NR:ns ## COG: AGl1981 COG1961 # Protein_GI_number: 15891106 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 206 35 241 250 199 52.0 2e-51 MTQTVPKGFVRAYLRASTTEQDATRALDTINTFAIERGLSICNYYIENESGSKLERPELF RLLKDCQQNDILLVEDVDRLSRLVGEDWNTLKKMIRQKDIRVVAVNVPTTWLASGHNDFD SRMFSAINDMLLDMLAAVARRDYEQRRERQQQGIARAKREGKYKGRQVNQSRYDAINRLI ASGSSWSQIQKVLGCSRATISKAVKQQTVNKMNHEPEGRE >gi|299857020|gb|ADWS01000044.1| GENE 37 29489 - 29728 212 79 aa, chain + ## HITS:1 COG:no KEGG:SPAB_00769 NR:ns ## KEGG: SPAB_00769 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 7 66 21 80 223 85 61.0 7e-16 MPRHYEIDSAWRASIKREPNGRQTVTTEAFVSQLALINFHWSCRQANQWIETYVTVFKDI YTQEGENRTFMLFNPNGGR >gi|299857020|gb|ADWS01000044.1| GENE 38 30251 - 30346 83 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MINLLIIVLRAVAALANALIAILELIRQFID >gi|299857020|gb|ADWS01000044.1| GENE 39 31151 - 31429 226 92 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNTLAALENTFRDMRKHGCQTVMVTQSLADFGRYSYKPRPAFQDWIERLKTGERLPRGRY FVGKKPGGRLVLIDELGGTWTEKVTVIHTNAG >gi|299857020|gb|ADWS01000044.1| GENE 40 31719 - 31973 271 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGHYTIRTNDDEDQAIKKAQEATGQASASKTFMTAILELQRNRDEMAQLRRELAQEKARS QELVSSVKQFRSSLNNLFDLADNP >gi|299857020|gb|ADWS01000044.1| GENE 41 32083 - 32904 427 273 aa, chain - ## HITS:1 COG:no KEGG:Aave_2747 NR:ns ## KEGG: Aave_2747 # Name: not_defined # Def: zinc metalloproteinase Mpr protein # Organism: A.avenae # Pathway: not_defined # 5 271 18 266 268 248 47.0 1e-64 MTRATERAYSELQQAFDFYNQRLFDGELPDCLITFQRGKNTMGYFSYRRFVAADGSGRMI DEIALNPEYFPVYPLIEVMQTLVHEQCHMWQYHYGNPSRKTYHNAQWAAKMESIGLMPSS TGRPGGAKVGQKINDYPIPGGRFQRVTLELFQGQFALSWFDRFPVQVEQQKDMTAVIEQW RETLALAHQNAEAGIDIEAVLSMALLPSVSPQNGSHSDDMAGSNDNDLSVAAFEDKPKRN KVKYQCRGCGAAVWGKAGLNIECGDCELAFIEN >gi|299857020|gb|ADWS01000044.1| GENE 42 32901 - 33080 90 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTEKITDEELADLLEALKRAHGMGVCSKAVKLAQRCADVFPAIVAELQEYRNAAKRTSA >gi|299857020|gb|ADWS01000044.1| GENE 43 33353 - 34003 198 216 aa, chain + ## HITS:1 COG:XF2027 KEGG:ns NR:ns ## COG: XF2027 COG0727 # Protein_GI_number: 15838621 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Xylella fastidiosa 9a5c # 24 153 25 156 210 69 33.0 5e-12 MDIKPNSVIHLEPGETLPGYTNLKPVPDKYFDELKALINKLNTQSGNIYLKLKQMYAFLD RFNKEFVSTFTSCQKGCSSCCKMDVHLTALEATHIAQASKLTARDNPLTTGHESKCPFLS EKGTCSIYNYRPLLCRTYHVLTPPEMCNDLDAQVMQYGSQSANMGNHIYKTIAEWIYFQT YHCTGKLETKDIRDYFPYPREDIQRFLHHNPPRPFC >gi|299857020|gb|ADWS01000044.1| GENE 44 34041 - 34496 495 151 aa, chain - ## HITS:1 COG:ECs3530 KEGG:ns NR:ns ## COG: ECs3530 COG2916 # Protein_GI_number: 15832784 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 14 139 8 134 134 89 51.0 2e-18 MSENETFDATKKLLLNIRSVRVFARETSFEQLLEMQEKLNAVIEERREEAEREAAERAER ERKRQELLQLIAGEGFSPEELLGLSEDAQKTRKKTLPKAPPKYQFDENGETKYWSGRGRT PKPIDEALKAGRSLDEFLIKKDASSTAGDEQ >gi|299857020|gb|ADWS01000044.1| GENE 45 34508 - 34780 143 90 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_A0022 NR:ns ## KEGG: ECH74115_A0022 # Name: topB # Def: DNA topoisomerase III (EC:5.99.1.2) # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 3 90 630 717 718 127 64.0 8e-29 MSRLEAPCPSCSKEIIIRPKGFFCSGCEFKIWSEVSGKKLTQNQVETLIKKGKTGEIKGF TSNKTGKKFDAAIVLQDKTTGKLGFQFSKK Prediction of potential genes in microbial genomes Time: Sun May 15 22:50:45 2011 Seq name: gi|299857019|gb|ADWS01000045.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont44.1, whole genome shotgun sequence Length of sequence - 33592 bp Number of predicted genes - 31, with homology - 31 Number of transcription units - 17, operones - 9 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 71 - 101 3.0 1 1 Op 1 5/0.000 - CDS 251 - 1027 875 ## COG3022 Uncharacterized protein conserved in bacteria 2 1 Op 2 . - CDS 1097 - 2527 812 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 - Prom 2584 - 2643 4.3 + Prom 2700 - 2759 1.9 3 2 Op 1 5/0.000 + CDS 2806 - 3759 1233 ## COG0176 Transaldolase + Term 3767 - 3807 9.3 + Prom 3785 - 3844 2.4 4 2 Op 2 . + CDS 3874 - 4461 687 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 - Term 4451 - 4488 6.2 5 3 Tu 1 4/0.667 - CDS 4496 - 5062 720 ## COG1584 Predicted membrane protein - Prom 5131 - 5190 4.5 - Term 5091 - 5131 3.2 6 4 Op 1 . - CDS 5211 - 5924 570 ## COG4735 Uncharacterized protein conserved in bacteria 7 4 Op 2 . - CDS 5950 - 6354 408 ## ECO103_0013 hypothetical protein - Prom 6392 - 6451 4.9 8 5 Op 1 31/0.000 + CDS 6731 - 8647 2325 ## COG0443 Molecular chaperone + Term 8676 - 8722 11.0 9 5 Op 2 . + CDS 8736 - 9866 1169 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 9943 - 9975 5.0 - Term 9929 - 9962 5.2 10 6 Tu 1 . - CDS 9970 - 10122 160 ## ECO103_0016 regulatory protein MokC for HokC - Prom 10332 - 10391 4.3 + Prom 10617 - 10676 5.2 11 7 Op 1 5/0.000 + CDS 10708 - 11874 1272 ## COG3004 Na+/H+ antiporter + Term 11890 - 11921 2.4 12 7 Op 2 . + CDS 11940 - 12839 811 ## COG0583 Transcriptional regulator 13 8 Tu 1 . - CDS 12878 - 13303 232 ## ECIAI1_0019 hypothetical protein - Prom 13324 - 13383 9.6 14 9 Op 1 . - CDS 13618 - 13836 61 ## ECUMN_0018 hypothetical protein 15 9 Op 2 . - CDS 13849 - 14856 444 ## COG3188 P pilus assembly protein, porin PapC - Prom 14895 - 14954 4.6 16 10 Tu 1 . - CDS 15427 - 15732 91 ## ECIAI1_0022 hypothetical protein - Term 17260 - 17312 1.3 17 11 Tu 1 . - CDS 17332 - 17595 422 ## PROTEIN SUPPORTED gi|15799705|ref|NP_285717.1| 30S ribosomal protein S20 - Prom 17636 - 17695 3.6 + Prom 17842 - 17901 5.2 18 12 Op 1 16/0.000 + CDS 17924 - 18865 391 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 19 12 Op 2 16/0.000 + CDS 18908 - 21724 3182 ## COG0060 Isoleucyl-tRNA synthetase 20 12 Op 3 7/0.000 + CDS 21724 - 22218 572 ## COG0597 Lipoprotein signal peptidase 21 12 Op 4 7/0.000 + CDS 22306 - 22755 257 ## PROTEIN SUPPORTED gi|225086978|ref|YP_002658248.1| ribosomal protein S2 22 12 Op 5 3/0.667 + CDS 22757 - 23707 441 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P + Term 23736 - 23769 2.1 23 12 Op 6 3/0.667 + CDS 23773 - 24687 704 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Term 24704 - 24743 3.3 + Prom 24708 - 24767 3.9 24 13 Tu 1 . + CDS 24854 - 25675 926 ## COG0289 Dihydrodipicolinate reductase + Term 25725 - 25766 -0.3 + Prom 26042 - 26101 5.5 25 14 Op 1 24/0.000 + CDS 26236 - 27279 1047 ## COG0505 Carbamoylphosphate synthase small subunit 26 14 Op 2 . + CDS 27297 - 30518 4290 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) + Term 30529 - 30563 1.2 27 15 Tu 1 . - CDS 30526 - 30744 121 ## ECO103_0035 hypothetical protein - Prom 30913 - 30972 2.8 + Prom 30531 - 30590 4.8 28 16 Tu 1 . + CDS 30779 - 31174 312 ## ECO103_0036 DNA-binding transcriptional activator CaiF + Term 31282 - 31318 3.0 - Term 31024 - 31056 -1.0 29 17 Op 1 3/0.667 - CDS 31260 - 31817 423 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 30 17 Op 2 5/0.000 - CDS 31856 - 32749 975 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 31 17 Op 3 . - CDS 32750 - 33592 667 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Predicted protein(s) >gi|299857019|gb|ADWS01000045.1| GENE 1 251 - 1027 875 258 aa, chain - ## HITS:1 COG:yaaA KEGG:ns NR:ns ## COG: yaaA COG3022 # Protein_GI_number: 16128000 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 258 1 258 258 508 99.0 1e-144 MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGIN AARFHDWQPDFTPENARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRP LDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVK PKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFF DEDSSSNGELVFKRYEQR >gi|299857019|gb|ADWS01000045.1| GENE 2 1097 - 2527 812 476 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 6 447 8 446 456 317 40 6e-86 MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSLKNSIHPQLGGLTS FQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYKERD VNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSGVQANAVARALSFSFDFPPLV TGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLTSMVICVINIGQLPHVIWSIFES AFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSAPNAAAAAASWPPHPAAQGIVQM IGIFIDTLVICTASAMLILLAGNDTTYMPLEGIQLIQKAMRVLMGSWGAEFVTLVVILFA FSSIVANYIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSLPLMWQLADIIMACMA ITNLTAILLLSPVVHTIASDYLRQRKLGVRPVFDPLRYPDIGRQLSPDAWDDVSQE >gi|299857019|gb|ADWS01000045.1| GENE 3 2806 - 3759 1233 317 aa, chain + ## HITS:1 COG:ECs0008 KEGG:ns NR:ns ## COG: ECs0008 COG0176 # Protein_GI_number: 15829262 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 608 99.0 1e-174 MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAK QQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYN DAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPFVG RILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCD RLTIAPTLLKELAESEGAIERKLSYTGEVKARPARITESEFLWQHNQDPMAVDKLAEGIR KFAIDQEKLEKMIGDLL >gi|299857019|gb|ADWS01000045.1| GENE 4 3874 - 4461 687 195 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 6 191 2 191 194 269 73 2e-71 MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCE LVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSRQV GVIRKQALILNLPGQPKSIKETLEGVKDAAGNVVVHGIFASVPYCIHLLEGPYVETAPEV VAAFRPKSARRDVSE >gi|299857019|gb|ADWS01000045.1| GENE 5 4496 - 5062 720 188 aa, chain - ## HITS:1 COG:ECs0010 KEGG:ns NR:ns ## COG: ECs0010 COG1584 # Protein_GI_number: 15829264 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 299 100.0 2e-81 MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIFYGGIAQIFAGLLEYKK GNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVYLGLWGVFTLFMFFGTLKG ARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLICGASAIYLAMGEVLNEQFGRT VLPIGESH >gi|299857019|gb|ADWS01000045.1| GENE 6 5211 - 5924 570 237 aa, chain - ## HITS:1 COG:yaaW KEGG:ns NR:ns ## COG: yaaW COG4735 # Protein_GI_number: 16128005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 237 1 237 237 394 99.0 1e-110 MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLMRNELFKSMEGHPEQHR RNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKLKADKEMSTFEIEQQLLEQ FLRNTWKNMDEEHKQEFLHAVDARVNELEELLPLLMKDKLLAKGVSHLLSSQLTRILRTH AAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVTIPAVLQIACLRRMVSATQV >gi|299857019|gb|ADWS01000045.1| GENE 7 5950 - 6354 408 134 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0013 NR:ns ## KEGG: ECO103_0013 # Name: yaaI # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 134 1 134 134 246 100.0 2e-64 MKSVFTISASLAISLMLCCTAQANDHKILGVIAMPRNETNDLALKLPVCRIVKRIQLSAD HGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTV NSSDMATLKIIGDD >gi|299857019|gb|ADWS01000045.1| GENE 8 6731 - 8647 2325 638 aa, chain + ## HITS:1 COG:ECs0014 KEGG:ns NR:ns ## COG: ECs0014 COG0443 # Protein_GI_number: 15829268 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 638 1 638 638 1105 99.0 0 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVT NPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVL KKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG LDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV TRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKE PRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPT KHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA DGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGD HLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKASIEAKMQELAQVSQKLME IAQQQHAQQQTAGADASANNAKDDDVVDAEFEEVKDKK >gi|299857019|gb|ADWS01000045.1| GENE 9 8736 - 9866 1169 376 aa, chain + ## HITS:1 COG:ECs0015 KEGG:ns NR:ns ## COG: ECs0015 COG0484 # Protein_GI_number: 15829269 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Escherichia coli O157:H7 # 1 376 1 376 376 698 100.0 0 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDS QKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYN MELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQ QTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAP AGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQTG KLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNEKQKQLLQELQESFGGPTGEHNSPRS KSFFDGVKKFFDDLTR >gi|299857019|gb|ADWS01000045.1| GENE 10 9970 - 10122 160 50 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0016 NR:ns ## KEGG: ECO103_0016 # Name: mokC # Def: regulatory protein MokC for HokC # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 50 20 69 69 74 100.0 1e-12 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE >gi|299857019|gb|ADWS01000045.1| GENE 11 10708 - 11874 1272 388 aa, chain + ## HITS:1 COG:ECs0017 KEGG:ns NR:ns ## COG: ECs0017 COG3004 # Protein_GI_number: 15829271 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 632 99.0 0 MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNML LWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADP ITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYTNDLS MASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLK EKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGK PLGISLFCWLALRLKLAHLPEGTTYQQIMAVGILCGIGFTMSIFIASLAFGSVDPELINW AKLGILVGSISSAVIGYSWLRVRLRPSV >gi|299857019|gb|ADWS01000045.1| GENE 12 11940 - 12839 811 299 aa, chain + ## HITS:1 COG:nhaR KEGG:ns NR:ns ## COG: nhaR COG0583 # Protein_GI_number: 16128014 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 299 3 301 301 627 99.0 1e-180 MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEP SELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVLNAAVVEGE PIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPPE KPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNAIFV APTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFSPAAR >gi|299857019|gb|ADWS01000045.1| GENE 13 12878 - 13303 232 141 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0019 NR:ns ## KEGG: ECIAI1_0019 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 141 179 319 319 282 100.0 3e-75 MTCGFEDQSIDTGRFVLSRINNENYQFHHIRFDCIQGEQGELVFEPSDVEYYFEPVTIQE SGTSILKNELENSEDGAGQVGFQLSNDGTNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRT YGNNVSSGQIMSRVKIVVMYN >gi|299857019|gb|ADWS01000045.1| GENE 14 13618 - 13836 61 72 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0018 NR:ns ## KEGG: ECUMN_0018 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 52 1 52 319 101 90.0 9e-21 MKWLLLITLSLYSFIVQSAPCALTNVGEQRGTYILKSLSMKGNLTAEKLKTPEISLSVQT CKRQPTPLKFIF >gi|299857019|gb|ADWS01000045.1| GENE 15 13849 - 14856 444 335 aa, chain - ## HITS:1 COG:ECs0022 KEGG:ns NR:ns ## COG: ECs0022 COG3188 # Protein_GI_number: 15829276 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 335 482 816 816 641 97.0 0 MQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNNWQHISYTFSASQSYDENNKEEER FNLFISIPFYWGDDIAKTRHQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVNQ QQQNNDTSLGTNLSWRTPIAIIDGSYSHSKNAWQSGGSISSGLVVWSGGINITNQLSDTF AILDAPGLEGAHINGQKYNRTNSKGQVVYDLIIPHRENHLVLDIANSESETELQGNRQII APYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRVD EIPTGIKVALNDEQNLFCTITFQHVIDENKTYICQ >gi|299857019|gb|ADWS01000045.1| GENE 16 15427 - 15732 91 101 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0022 NR:ns ## KEGG: ECIAI1_0022 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 101 373 473 473 202 99.0 4e-51 MLCEDIMPGRWTTQLVNKHLGYRYTGVFKTLASIDDKPSRFEILIPLVQTLVRDNVKLNN DVYKELKKFMHDYDKTSPEMRKYLQSINESMFLMKNIAHQN >gi|299857019|gb|ADWS01000045.1| GENE 17 17332 - 17595 422 87 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15799705|ref|NP_285717.1| 30S ribosomal protein S20 [Escherichia coli O157:H7 EDL933] # 1 87 1 87 87 167 98 1e-40 MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDR QAAKGLIHKNKAARHKANLTAQINKLA >gi|299857019|gb|ADWS01000045.1| GENE 18 17924 - 18865 391 313 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 1 307 1 312 317 155 33 4e-37 MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPL ELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKF LAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLAL AESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGV ANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDE LTAREFFGLTKPA >gi|299857019|gb|ADWS01000045.1| GENE 19 18908 - 21724 3182 938 aa, chain + ## HITS:1 COG:ileS KEGG:ns NR:ns ## COG: ileS COG0060 # Protein_GI_number: 16128020 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 938 1 938 938 1956 100.0 0 MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYA NGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAA EFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHK GAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIW TTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAE LELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPD GTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQ WFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHK DTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGST HSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQG RKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTAR FLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCS VEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPG EREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAV TLYAEPELSAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEK CPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKRKFA >gi|299857019|gb|ADWS01000045.1| GENE 20 21724 - 22218 572 164 aa, chain + ## HITS:1 COG:lspA KEGG:ns NR:ns ## COG: lspA COG0597 # Protein_GI_number: 16128021 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Escherichia coli K12 # 1 164 1 164 164 305 99.0 2e-83 MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSF LADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGF VVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ >gi|299857019|gb|ADWS01000045.1| GENE 21 22306 - 22755 257 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225086978|ref|YP_002658248.1| ribosomal protein S2 [gamma proteobacterium NOR5-3] # 1 144 1 143 148 103 36 1e-21 MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDK TTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDS ITVDFNHPLAGQTVHFDIEVLEIDPALEA >gi|299857019|gb|ADWS01000045.1| GENE 22 22757 - 23707 441 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 298 1 287 632 174 34 7e-43 MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQI SEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIG HAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDA LRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGK SAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENI VFEVPKELRVDIREVD >gi|299857019|gb|ADWS01000045.1| GENE 23 23773 - 24687 704 304 aa, chain + ## HITS:1 COG:yaaF KEGG:ns NR:ns ## COG: yaaF COG1957 # Protein_GI_number: 16128024 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli K12 # 1 304 1 304 304 579 99.0 1e-165 MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEI PLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTL VAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSG IEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAW LVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVKVALDLDVKGFQQWVAEVL ALAS >gi|299857019|gb|ADWS01000045.1| GENE 24 24854 - 25675 926 273 aa, chain + ## HITS:1 COG:dapB KEGG:ns NR:ns ## COG: dapB COG0289 # Protein_GI_number: 16128025 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Escherichia coli K12 # 1 273 1 273 273 470 99.0 1e-132 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGV TVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAAD IAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAH ALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSR MTFANGAVRSALWLSGKESGLFDMRDVLDLNSL >gi|299857019|gb|ADWS01000045.1| GENE 25 26236 - 27279 1047 347 aa, chain + ## HITS:1 COG:ECs0035 KEGG:ns NR:ns ## COG: ECs0035 COG0505 # Protein_GI_number: 15829289 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Escherichia coli O157:H7 # 1 347 36 382 382 716 100.0 0 MTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNT EDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNG MDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCR LTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLL ALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDG TLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK >gi|299857019|gb|ADWS01000045.1| GENE 26 27297 - 30518 4290 1073 aa, chain + ## HITS:1 COG:ECs0036 KEGG:ns NR:ns ## COG: ECs0036 COG0458 # Protein_GI_number: 15829290 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Escherichia coli O157:H7 # 1 1073 1 1073 1073 2123 99.0 0 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA DAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGG IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVG ITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDT AYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP VIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVL GGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIME HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLI EVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKF PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDL AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGR RAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK >gi|299857019|gb|ADWS01000045.1| GENE 27 30526 - 30744 121 72 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0035 NR:ns ## KEGG: ECO103_0035 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 72 1 72 72 135 100.0 7e-31 MTRFEAIKQGHIKIVDISIVCNFTVDKCELNPAYVIKNIDSPKDLLNGQKKRSSSENRIT YSIKLADEKYPP >gi|299857019|gb|ADWS01000045.1| GENE 28 30779 - 31174 312 131 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0036 NR:ns ## KEGG: ECO103_0036 # Name: caiF # Def: DNA-binding transcriptional activator CaiF # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 131 1 131 131 249 100.0 2e-65 MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVAEISCEVK MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQK WQMMLSKSMRR >gi|299857019|gb|ADWS01000045.1| GENE 29 31260 - 31817 423 185 aa, chain - ## HITS:1 COG:ECs0038 KEGG:ns NR:ns ## COG: ECs0038 COG0663 # Protein_GI_number: 15829292 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli O157:H7 # 1 185 19 203 203 365 98.0 1e-101 MVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTD TIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQ LLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTD VTPKR >gi|299857019|gb|ADWS01000045.1| GENE 30 31856 - 32749 975 297 aa, chain - ## HITS:1 COG:caiD KEGG:ns NR:ns ## COG: caiD COG1024 # Protein_GI_number: 16128030 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 1 297 1 297 297 582 98.0 1e-166 MKQQGTTLPANNHAIKQYAFFAGMLSSLKKQKWRKGMSESLHLTRNGSILEITLDRPKAN AIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGF AGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVL RLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAI AALKEIFRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR >gi|299857019|gb|ADWS01000045.1| GENE 31 32750 - 33592 667 280 aa, chain - ## HITS:1 COG:ECs0040 KEGG:ns NR:ns ## COG: ECs0040 COG0318 # Protein_GI_number: 15829294 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 5 280 247 522 522 587 98.0 1e-168 AAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHRLREVMFYL NLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDH NRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFV DRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSE EEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK Prediction of potential genes in microbial genomes Time: Sun May 15 22:51:10 2011 Seq name: gi|299857018|gb|ADWS01000046.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont45.1, whole genome shotgun sequence Length of sequence - 33083 bp Number of predicted genes - 30, with homology - 29 Number of transcription units - 22, operones - 5 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 171 93 ## COG1662 Transposase and inactivated derivatives, IS1 family + Term 356 - 392 6.1 - Term 235 - 286 1.5 2 2 Tu 1 . - CDS 298 - 1635 600 ## COG3385 FOG: Transposase and inactivated derivatives - Prom 1670 - 1729 2.8 - Term 1740 - 1771 4.1 3 3 Tu 1 . - CDS 1798 - 3204 1639 ## COG0362 6-phosphogluconate dehydrogenase - Prom 3256 - 3315 3.5 4 4 Op 1 . - CDS 3318 - 3716 198 ## Ctu_27260 hypothetical protein 5 4 Op 2 3/0.429 - CDS 3703 - 4914 566 ## COG0438 Glycosyltransferase 6 4 Op 3 3/0.429 - CDS 4914 - 6044 696 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 7 4 Op 4 3/0.429 - CDS 6044 - 7147 332 ## COG0451 Nucleoside-diphosphate-sugar epimerases 8 4 Op 5 . - CDS 7149 - 7751 526 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases - Prom 7809 - 7868 5.7 9 5 Tu 1 . + CDS 8236 - 8529 228 ## COG1662 Transposase and inactivated derivatives, IS1 family + Term 8581 - 8617 -0.8 + Prom 8531 - 8590 1.9 10 6 Tu 1 . + CDS 8638 - 9015 244 ## ECIAI1_4075 outer membrane porin L + Term 9077 - 9113 4.8 - Term 9012 - 9054 3.5 11 7 Tu 1 . - CDS 9106 - 10371 1003 ## COG0477 Permeases of the major facilitator superfamily - Prom 10409 - 10468 2.3 12 8 Op 1 . - CDS 10473 - 11453 820 ## JW3844 predicted sugar phosphate isomerase 13 8 Op 2 2/0.571 - CDS 11461 - 12171 545 ## COG2188 Transcriptional regulators - Prom 12253 - 12312 7.8 - Term 12335 - 12364 2.1 14 9 Tu 1 . - CDS 12388 - 14211 2249 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 14446 - 14505 5.8 15 10 Tu 1 5/0.143 + CDS 14584 - 15993 1631 ## COG0174 Glutamine synthetase + Term 16011 - 16042 3.1 + Prom 16077 - 16136 5.2 16 11 Op 1 14/0.000 + CDS 16167 - 17216 1118 ## COG3852 Signal transduction histidine kinase, nitrogen specific 17 11 Op 2 . + CDS 17228 - 18637 1473 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Prom 18669 - 18728 2.9 18 12 Tu 1 . + CDS 18749 - 18859 111 ## + Term 18957 - 18994 2.2 19 13 Tu 1 2/0.571 - CDS 19049 - 20422 1501 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 20523 - 20582 2.1 20 14 Tu 1 . - CDS 20611 - 21120 560 ## COG3078 Uncharacterized protein conserved in bacteria - Prom 21160 - 21219 3.9 + Prom 21504 - 21563 5.1 21 15 Tu 1 . + CDS 21738 - 22334 689 ## COG0218 Predicted GTPase - Term 22455 - 22492 9.4 22 16 Tu 1 . - CDS 22716 - 25502 3301 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains - Prom 25732 - 25791 4.5 23 17 Tu 1 . + CDS 25561 - 25746 61 ## SbBS512_E4336 hypothetical protein + Term 25844 - 25872 -1.0 + Prom 25782 - 25841 4.5 24 18 Tu 1 . + CDS 26055 - 26798 600 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 26802 - 26845 9.1 - Term 26790 - 26833 1.5 25 19 Tu 1 1/0.714 - CDS 26839 - 28269 1158 ## COG5339 Uncharacterized protein conserved in bacteria - Prom 28363 - 28422 11.4 - Term 28364 - 28411 5.1 26 20 Op 1 5/0.143 - CDS 28424 - 29050 802 ## COG0526 Thiol-disulfide isomerase and thioredoxins 27 20 Op 2 5/0.143 - CDS 29067 - 30005 645 ## COG2334 Putative homoserine kinase type II (protein kinase fold) - Prom 30050 - 30109 1.9 28 21 Tu 1 . - CDS 30130 - 30399 417 ## COG3084 Uncharacterized protein conserved in bacteria - Prom 30638 - 30697 1.9 + Prom 30385 - 30444 2.9 29 22 Op 1 11/0.000 + CDS 30469 - 31053 385 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 30 22 Op 2 . + CDS 31035 - 31562 424 ## COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein + Term 31629 - 31662 -0.4 - 5S_RRNA 31666 - 31796 99.0 # EU285519 [D:5957..6097] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. - LSU_RRNA 31877 - 33083 99.0 # CP001063 [R:2772744..2775646] # 23S ribosomal RNA # Shigella boydii CDC 3083-94 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella. Predicted protein(s) >gi|299857018|gb|ADWS01000046.1| GENE 1 1 - 171 93 56 aa, chain + ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 56 112 167 167 106 100.0 1e-23 GKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|299857018|gb|ADWS01000046.1| GENE 2 298 - 1635 600 445 aa, chain - ## HITS:1 COG:yi41 KEGG:ns NR:ns ## COG: yi41 COG3385 # Protein_GI_number: 16132099 # Func_class: L Replication, recombination and repair # Function: FOG: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 24 445 23 437 442 251 38.0 1e-66 MPLLNDLLDFSDHPLMPPPSAQLFAEHLPVEWIQHCLTLSAHATVRRRRLPGDMVIWMVV AMAFFRNEPITDVVRRLNLSADGEAGINLLARSAVTQARQRVGAAPVEWLFHQTAQTWGS ERYLKDDWHGLQLFAIDGAQFRTPDEPELREYYGSANTSTERQSAYPVMRLVALMNLGSH ILVNAVTAPYRRSETVLAHSMLATIPDNSITLFDKLFYSADLLLTLNQQGCNRHWLLPAW KNIAAETEESYGPGDRLLKLKVSLQARKKNPALPEFWYARAVTYEVNGVEKTVLTSLPAD RYKAKEVAELYHSRWEIEVGFRNLKSSPLNNALVLRSRKVELLEQEVWGMLLAYNLIRCE ATKAAEKHKKAASEISFKFAFQFIATEMIVLGNTASPGTIPKRLEHLRGALEVVFITKRP RPSRPRAVKISKTRYPVKRSTAPLK >gi|299857018|gb|ADWS01000046.1| GENE 3 1798 - 3204 1639 468 aa, chain - ## HITS:1 COG:gnd KEGG:ns NR:ns ## COG: gnd COG0362 # Protein_GI_number: 16129970 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Escherichia coli K12 # 1 468 1 468 468 891 95.0 0 MSKQQIGVVGMAVMGRNLALNIESRGYTVSVFNRSRDKTEEVIAENPGKKLVPFYTVKEF VESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF NFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGPDGAGH YVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAETFTEWNKGELNSYLIDITKDIFT KKDEEGKYLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKDQRVAAS KVLSGPQAKPAADKAEFVEKVRRALYLGKIVSYAQGFSQLRAASDENNWDLNYGEIAKIF RAGCIIRAQFLQKITDAYAENAGIANLLLAPYFKKIADEYQQALRDVVAYAVQNGIPVPT FSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRTDKEGVFHTEWLD >gi|299857018|gb|ADWS01000046.1| GENE 4 3318 - 3716 198 132 aa, chain - ## HITS:1 COG:no KEGG:Ctu_27260 NR:ns ## KEGG: Ctu_27260 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 1 131 1 131 134 197 70.0 1e-49 MRLIDTHQLEALYEQAGKSARLRAHLLLHNSHREKVQRLLIALVQGSYVDPHFHELPHQW EMFVVMQGQVQVCLYGKDGEIINQFVAGENTAISVVEFSPGDIHSVECLSPRALMMEVKE GPFDPSFAKAFI >gi|299857018|gb|ADWS01000046.1| GENE 5 3703 - 4914 566 403 aa, chain - ## HITS:1 COG:TM0631 KEGG:ns NR:ns ## COG: TM0631 COG0438 # Protein_GI_number: 15643396 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Thermotoga maritima # 5 393 16 423 434 150 25.0 4e-36 MKLALIIDDYLPNSTRVGAKMFHELAQEFIRRGHDVTVITPDICLQDDVSFSTFQGVKTW RFKSGPLKDVSKIQRAINETLLSYRAWNSIKSQIKKETFDGVVYYSPSIFWGHLVKKIKS RCQCPAYLILRDMFPQWVIDAGMLKAGSLIERYFRVFERSSYRQANRIGLMSDKNLEVFR VNNKGYPCEVLRNWASLTPTVPPQGYIPLRQRLGLDDKVIFFYGGNIGHAQDMGNLMRLA RKMAEHPQAHFLFIGQGDEVELINSLAAEWSLPNFTYLASVNQDEFKFILSEMDIGLFSL SARHSSHNFPGKLLGYMVQSLPILGSVNAGNDLLDVVNQNNAGLIHINGEDDKLHESALL MLKDVAARRQFGLGANALLREQFSVESAAQTIEMRLEACNATH >gi|299857018|gb|ADWS01000046.1| GENE 6 4914 - 6044 696 376 aa, chain - ## HITS:1 COG:PM1009 KEGG:ns NR:ns ## COG: PM1009 COG0381 # Protein_GI_number: 15602874 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Pasteurella multocida # 1 376 1 376 376 545 70.0 1e-155 MKKLKIMSVVGTRPEIIRLSRVLAKLDEHCEHILVHTGQNYDYELNEVFFNDLGVRKPDY FLNAAGKNAAETIGQVIIKVDEVLESEKPEAMLVLGDTNSCISAIPAKRRKVPIFHMEAG NRCFDQRVPEETNRRIVDHTADINMTYSDIAREYLLAEGLPADRIIKTGSPMFEVLTYYM PQIDNSDVLSRLNLRSGEFFVVSAHREENVDSPKQLVKLATILNTIAEKYDLPVIVSTHP RTRNRINEQGIEFHPNINLLKPLGFHDYNHLQKNSRAVLSDSGTITEESSIMNFPAVNIR EAHERPEGFEEASVMMVGLDCERVLQALDILATQPRGETRLLRQVSDYSMPNVSDKVVRI VHSYTDYVKRVVWKEY >gi|299857018|gb|ADWS01000046.1| GENE 7 6044 - 7147 332 367 aa, chain - ## HITS:1 COG:SA0149_1 KEGG:ns NR:ns ## COG: SA0149_1 COG0451 # Protein_GI_number: 15925858 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Staphylococcus aureus N315 # 1 248 1 250 251 218 43.0 1e-56 MKILITGADGFIGRNLCLRLQEAGYCDLVKIDRGSSAADLETGLQDADFVYHLAGINRPK NVDEFAEGNSNLTQQIVDYLLAKHKSIPIMISSSIQAELVNAYGQSKAAAEKHIERYAAE SGAAYFIYRYPNVFGKWCKPNYNSFVATFCHNIANNIDITINDSFAPVNLVYIDDVCSDA IKLLSGKVESGYKTVKPVYSTTVGEVAELLYRFKESRSTLVTEAVGTGFIRALYSTWLSY LPADMFAYSVPSYGDARGVFCEMLKTPSAGQFSFFTAHPGITRGGHYHHTKNEKFLVIRG QACFRFEHVITGERYEMNVSSDEFKIVETVPGWTHDVTNIGADELIVMLWANEIFSRDEP DTIARPL >gi|299857018|gb|ADWS01000046.1| GENE 8 7149 - 7751 526 200 aa, chain - ## HITS:1 COG:PM1007 KEGG:ns NR:ns ## COG: PM1007 COG1086 # Protein_GI_number: 15602872 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Pasteurella multocida # 1 195 145 339 344 279 69.0 2e-75 MVAKSRNVNSDKTVICGTRYGNVMASRGSVIPLFVDLIKAGKALTITDPNMTRFMMTLED AVDLVLYAFEHGNNGDIFVQKAPAATIETLAIALKELLNVEQHPVNVIGTRHGEKLYEAL LSREEMIAAIDMGDYYRVPPDLRDLNYGKYVEQGDSRISAVEDYNSHNTQRLDVEGMKTL LLKLPFIRALRAGEHYDLDA >gi|299857018|gb|ADWS01000046.1| GENE 9 8236 - 8529 228 97 aa, chain + ## HITS:1 COG:ECs1372 KEGG:ns NR:ns ## COG: ECs1372 COG1662 # Protein_GI_number: 15830626 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli O157:H7 # 1 97 71 167 167 179 98.0 8e-46 MAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNL NLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|299857018|gb|ADWS01000046.1| GENE 10 8638 - 9015 244 125 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_4075 NR:ns ## KEGG: ECIAI1_4075 # Name: ompL # Def: outer membrane porin L # Organism: E.coli_IAI1 # Pathway: not_defined # 1 125 106 230 230 234 99.0 1e-60 MYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFE PHYFMRVNDFNSSNGKDHHWEITNTFRYRINENWLPYFELRWLDRNVEPYHREQNQIRIG TKYFF >gi|299857018|gb|ADWS01000046.1| GENE 11 9106 - 10371 1003 421 aa, chain - ## HITS:1 COG:yihN KEGG:ns NR:ns ## COG: yihN COG0477 # Protein_GI_number: 16131714 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 421 1 421 421 773 99.0 0 MLTKKKWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGF FLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMMNWPVLLK SVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIA VGIIIFFVLNDKEEAPSVEVKKEDGASQNTSMTSVLRDKTIWLIAFNVFFVYAVYCGLTF FIPFLKNIYLLPVALVGAYGIINQYCLKMIGGPIGGMISDKILKSPSKYLCYTFIISTAA LVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKTGAAMALGSFIG YAPAMFCFSLYGYILDLNPGIIGYKIVFGIMACFAFSGAVVSVMLVKRISQRKKEMLAAE A >gi|299857018|gb|ADWS01000046.1| GENE 12 10473 - 11453 820 326 aa, chain - ## HITS:1 COG:no KEGG:JW3844 NR:ns ## KEGG: JW3844 # Name: yihM # Def: predicted sugar phosphate isomerase # Organism: E.coli_J # Pathway: not_defined # 1 326 1 326 326 635 100.0 0 MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGE RFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYE GNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFA NMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLIC LGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKE DAINQINHVRNVLQQIKQEANHLLNH >gi|299857018|gb|ADWS01000046.1| GENE 13 11461 - 12171 545 236 aa, chain - ## HITS:1 COG:ECs4794 KEGG:ns NR:ns ## COG: ECs4794 COG2188 # Protein_GI_number: 15834048 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 471 99.0 1e-133 MAENQSTVENAKEKLDRWLKDGITTPGGKLPSERELGELLGIKRMTLRQALLNLEAESKI FRKDRKGWFVTQPRFNYSPELSASFQRAAIEQGREPSWGFTEKSRTSDIPQTLAPLIAVT PSTELYRITGWGALEGHKVFYHETYINPEVAPGFIEQLENHSFSAVWEKCYQKETVVKKL IFKPVRMPGDISKYLGGSAGMPAILIEKHRADQQGNIVQIDIEYWRFEAVDLIINL >gi|299857018|gb|ADWS01000046.1| GENE 14 12388 - 14211 2249 607 aa, chain - ## HITS:1 COG:ECs4793 KEGG:ns NR:ns ## COG: ECs4793 COG1217 # Protein_GI_number: 15834047 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Escherichia coli O157:H7 # 1 607 1 607 607 1205 100.0 0 MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKN TAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYG LKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMA EDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTII DSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPAL SVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSG RGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALG ERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEV GQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTG KKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRA NRAPKDD >gi|299857018|gb|ADWS01000046.1| GENE 15 14584 - 15993 1631 469 aa, chain + ## HITS:1 COG:ECs4792 KEGG:ns NR:ns ## COG: ECs4792 COG0174 # Protein_GI_number: 15834046 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Escherichia coli O157:H7 # 1 469 1 469 469 961 100.0 0 MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKG INESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRSTG IADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWNSSTQYEGGNKGHRPAVKGGY FPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK YVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLSKNGVNLFAGDKYAGLSEQALYYIG GVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVSSPKARRIEVR FPDPAANPYLCFAALLMAGLDGIKNKIHPGEAMDKNLYDLPPEEAKEIPQVAGSLEEALN ELDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV >gi|299857018|gb|ADWS01000046.1| GENE 16 16167 - 17216 1118 349 aa, chain + ## HITS:1 COG:ECs4791 KEGG:ns NR:ns ## COG: ECs4791 COG3852 # Protein_GI_number: 15834045 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrogen specific # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 658 99.0 0 MATGTQPDAGQILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS LNIELMQESLEAGQGFTDNEVTLVLDGRSHILSVTAQRMPDGMILLEMAPMDNQRRLSQE QLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRN LVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQ VLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTL FYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPIRK >gi|299857018|gb|ADWS01000046.1| GENE 17 17228 - 18637 1473 469 aa, chain + ## HITS:1 COG:ECs4790 KEGG:ns NR:ns ## COG: ECs4790 COG2204 # Protein_GI_number: 15834044 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli O157:H7 # 1 469 1 469 469 914 99.0 0 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGM DGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAIS HYQEQQQPRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHA LHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHR LNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQL ENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPDSWATLLAQWADRALRSGHQN LLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME >gi|299857018|gb|ADWS01000046.1| GENE 18 18749 - 18859 111 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS >gi|299857018|gb|ADWS01000046.1| GENE 19 19049 - 20422 1501 457 aa, chain - ## HITS:1 COG:ECs4789 KEGG:ns NR:ns ## COG: ECs4789 COG0635 # Protein_GI_number: 15834043 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 # 1 457 3 459 459 940 100.0 0 MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQAVARYPERPLSLYVHIP FCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNK AQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQR LVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVF NYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFARPDDELAVA QREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQNQKELKQYYQQVDEQGNALWRG IALTRDDCIRRDVIKSLICNFRLDYAPIEKQWDLHFADYFAEDLKLLAPLAKDGLVDVDE KGIQVTAKGRLLIRNICMCFDTYLRQKARMQQFSRVI >gi|299857018|gb|ADWS01000046.1| GENE 20 20611 - 21120 560 169 aa, chain - ## HITS:1 COG:yihI KEGG:ns NR:ns ## COG: yihI COG3078 # Protein_GI_number: 16131706 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 169 1 169 169 211 100.0 8e-55 MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGSRAAGGNTTSGSKGQNA PKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGET LSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQEDMMRLLRGN >gi|299857018|gb|ADWS01000046.1| GENE 21 21738 - 22334 689 198 aa, chain + ## HITS:1 COG:ECs4787 KEGG:ns NR:ns ## COG: ECs4787 COG0218 # Protein_GI_number: 15834041 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 198 13 210 210 374 99.0 1e-104 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEW AVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQK LDTWFSEMQPVEETQDGE >gi|299857018|gb|ADWS01000046.1| GENE 22 22716 - 25502 3301 928 aa, chain - ## HITS:1 COG:polA_2 KEGG:ns NR:ns ## COG: polA_2 COG0749 # Protein_GI_number: 16131704 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Escherichia coli K12 # 289 928 1 640 640 1231 100.0 0 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI HQLMENCTRLDVPLLVEVGSGENWDQAH >gi|299857018|gb|ADWS01000046.1| GENE 23 25561 - 25746 61 61 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E4336 NR:ns ## KEGG: SbBS512_E4336 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 61 20 80 80 101 100.0 8e-21 MSFSPLFVKIFCRSSGSLANRHVDNFVHKLFTSLLIYYHAFYSMMFVFVFHVVKNKAIPN N >gi|299857018|gb|ADWS01000046.1| GENE 24 26055 - 26798 600 247 aa, chain + ## HITS:1 COG:ECs4785 KEGG:ns NR:ns ## COG: ECs4785 COG0204 # Protein_GI_number: 15834039 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Escherichia coli O157:H7 # 1 247 64 310 310 518 100.0 1e-147 MYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMN KYFLKQQLAWVPFLGLACWALDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPT TIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNR QPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLM SSQRQDK >gi|299857018|gb|ADWS01000046.1| GENE 25 26839 - 28269 1158 476 aa, chain - ## HITS:1 COG:yihF KEGG:ns NR:ns ## COG: yihF COG5339 # Protein_GI_number: 16131702 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 476 15 490 490 914 98.0 0 MIHKSATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKKKGEHAYDMTLSYKNFD KGFFNSRFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVN LVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAPAEYGKFSFGEGQFTFNGDGS SLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGESESKFNQINIINHG EDVAQIDAFVAKTMLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVR QFIIQYNIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVKWKNALG ELNANLDISIADPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKRA DKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH >gi|299857018|gb|ADWS01000046.1| GENE 26 28424 - 29050 802 208 aa, chain - ## HITS:1 COG:ECs4783 KEGG:ns NR:ns ## COG: ECs4783 COG0526 # Protein_GI_number: 15834037 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 410 100.0 1e-115 MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLH ISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALGVEDKVTVPLFEGVQKTQT IRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQL NPQGMDTSNMDVFVQQYADTVKYLSEKK >gi|299857018|gb|ADWS01000046.1| GENE 27 29067 - 30005 645 312 aa, chain - ## HITS:1 COG:ECs4782 KEGG:ns NR:ns ## COG: ECs4782 COG2334 # Protein_GI_number: 15834036 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Escherichia coli O157:H7 # 1 312 17 328 328 633 99.0 0 MDALFEQGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQ LVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTG RKQLFIHRPTIGLNEYLIEPRKLFEDATLMPSGLKAAFLKATDELIAAVTAHWREDFTVL RLHGDCHAGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEFS EFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKV LQEPPLQLTPMY >gi|299857018|gb|ADWS01000046.1| GENE 28 30130 - 30399 417 89 aa, chain - ## HITS:1 COG:ECs4781 KEGG:ns NR:ns ## COG: ECs4781 COG3084 # Protein_GI_number: 15834035 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 89 1 89 89 158 100.0 3e-39 MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSA KDAVIPGLQKDYEEDFKTALLRARGVIKE >gi|299857018|gb|ADWS01000046.1| GENE 29 30469 - 31053 385 194 aa, chain + ## HITS:1 COG:mobA KEGG:ns NR:ns ## COG: mobA COG0746 # Protein_GI_number: 16131698 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Escherichia coli K12 # 1 194 1 194 194 394 97.0 1e-110 MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEI YQASGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPEDLAARLNHQRKDA PVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAFMRLAGGHAVDFSDNKDAFIN VNTPEELARWQEKR >gi|299857018|gb|ADWS01000046.1| GENE 30 31035 - 31562 424 175 aa, chain + ## HITS:1 COG:mobB KEGG:ns NR:ns ## COG: mobB COG1763 # Protein_GI_number: 16131697 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein # Organism: Escherichia coli K12 # 6 175 1 170 170 332 99.0 2e-91 MAGKTMIPLLAFAAWSGTGKTTLLKQLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYEL RKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVL FRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQKQNG Prediction of potential genes in microbial genomes Time: Sun May 15 22:51:36 2011 Seq name: gi|299857017|gb|ADWS01000047.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont46.1, whole genome shotgun sequence Length of sequence - 32586 bp Number of predicted genes - 32, with homology - 32 Number of transcription units - 23, operones - 8 average op.length - 2.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 133 58 ## COG1662 Transposase and inactivated derivatives, IS1 family 2 2 Tu 1 . - CDS 152 - 607 55 ## YE1172 putative DNA-binding protein - Prom 792 - 851 8.8 3 3 Op 1 . - CDS 2159 - 3355 64 ## YE1171 putative maturase protein 4 3 Op 2 . - CDS 3357 - 4535 434 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 - TRNA 4699 - 4774 91.5 # Thr CGT 0 0 5 4 Op 1 22/0.000 - CDS 4889 - 6142 1433 ## COG0014 Gamma-glutamyl phosphate reductase 6 4 Op 2 . - CDS 6154 - 7257 1087 ## COG0263 Glutamate 5-kinase - Prom 7409 - 7468 8.4 + Prom 7402 - 7461 5.8 7 5 Tu 1 . + CDS 7545 - 8600 1042 ## COG3203 Outer membrane protein (porin) + Term 8608 - 8642 6.0 8 6 Op 1 . - CDS 8639 - 9040 581 ## SSON_0282 DNA-binding transcriptional regulator Crl 9 6 Op 2 6/0.111 - CDS 9098 - 10342 1155 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 10368 - 10427 3.4 - Term 10389 - 10427 9.1 10 7 Tu 1 . - CDS 10434 - 10892 576 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 10952 - 11011 3.2 + Prom 11002 - 11061 3.6 11 8 Tu 1 . + CDS 11153 - 12610 1796 ## COG2195 Di- and tripeptidases + Term 12623 - 12666 8.3 - Term 12382 - 12425 1.7 12 9 Op 1 5/0.222 - CDS 12667 - 13281 427 ## COG1186 Protein chain release factor B 13 9 Op 2 2/0.889 - CDS 13278 - 14417 780 ## COG1690 Uncharacterized conserved protein - Prom 14485 - 14544 3.2 14 10 Op 1 1/0.889 - CDS 14663 - 15037 257 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 15 10 Op 2 2/0.889 - CDS 15112 - 16167 1008 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 16 10 Op 3 . - CDS 16238 - 17008 725 ## COG1360 Flagellar motor protein - Prom 17100 - 17159 1.7 + Prom 16859 - 16918 1.8 17 11 Tu 1 . + CDS 16968 - 18707 1917 ## COG1298 Flagellar biosynthesis pathway, component FlhA + Prom 18727 - 18786 3.7 18 12 Op 1 . + CDS 18812 - 19090 177 ## ECIAI1_0269 hypothetical protein 19 12 Op 2 . + CDS 19083 - 19439 258 ## COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters + Term 19444 - 19479 6.5 - Term 19433 - 19465 4.3 20 13 Tu 1 . - CDS 19496 - 20269 273 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 20314 - 20373 9.7 + Prom 20365 - 20424 7.8 21 14 Op 1 9/0.000 + CDS 20455 - 20715 390 ## COG3077 DNA-damage-inducible protein J 22 14 Op 2 3/0.667 + CDS 20718 - 20996 103 ## COG3041 Uncharacterized protein conserved in bacteria + Prom 21012 - 21071 3.0 23 15 Tu 1 . + CDS 21152 - 21892 846 ## COG3034 Uncharacterized protein conserved in bacteria + Term 21903 - 21936 2.1 - Term 21762 - 21818 7.6 24 16 Op 1 . - CDS 21863 - 22630 642 ## COG0121 Predicted glutamine amidotransferase - Prom 22744 - 22803 2.4 - Term 22637 - 22667 1.7 25 16 Op 2 . - CDS 22836 - 23414 752 ## COG0279 Phosphoheptose isomerase - Prom 23446 - 23505 4.2 + Prom 23508 - 23567 3.2 26 17 Tu 1 . + CDS 23654 - 26098 2950 ## COG1960 Acyl-CoA dehydrogenases + Term 26107 - 26137 3.0 - Term 26094 - 26124 3.0 27 18 Tu 1 . - CDS 26141 - 26614 562 ## EC55989_0244 C-lysozyme inhibitor - Prom 26657 - 26716 3.9 + Prom 26648 - 26707 6.7 28 19 Tu 1 . + CDS 26768 - 27538 587 ## COG0388 Predicted amidohydrolase 29 20 Tu 1 . - CDS 27580 - 28623 219 ## COG5433 Transposase - Prom 28736 - 28795 7.5 30 21 Tu 1 . - CDS 29199 - 29945 318 ## COG5433 Transposase - Prom 29979 - 30038 5.2 - Term 30006 - 30047 7.6 31 22 Tu 1 . - CDS 30126 - 30359 126 ## ECO103_0232 hypothetical protein - Prom 30432 - 30491 7.8 32 23 Tu 1 . - CDS 30592 - 32586 1144 ## COG3209 Rhs family protein Predicted protein(s) >gi|299857017|gb|ADWS01000047.1| GENE 1 2 - 133 58 43 aa, chain + ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 43 125 167 167 84 100.0 7e-17 IERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|299857017|gb|ADWS01000047.1| GENE 2 152 - 607 55 151 aa, chain - ## HITS:1 COG:no KEGG:YE1172 NR:ns ## KEGG: YE1172 # Name: not_defined # Def: putative DNA-binding protein # Organism: Y.enterocolitica # Pathway: not_defined # 25 151 543 668 668 96 42.0 2e-19 MKGLGEQYKLNPDEFKDLLGISENECFYDLEYFSICSMLHYIGDDVLYLKMKEDIVLAIQ SLISGRNDIKKDTETFMLFLDMMTCPYLTVKHKRIIYRTYVEANTGQKRFTNAVIDSEID SLKNNVIFFNWSGDADLEHVLYKKELRTAYE >gi|299857017|gb|ADWS01000047.1| GENE 3 2159 - 3355 64 398 aa, chain - ## HITS:1 COG:no KEGG:YE1171 NR:ns ## KEGG: YE1171 # Name: not_defined # Def: putative maturase protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 398 1 406 406 318 46.0 2e-85 MLNQSFSVSNLIKLLKKTDPKRYKIGRNSAEYKKYIADKVNGSIETYSFGSISNSRINNK NVYIFKDFMDVLVARKINDNIKRVYSVKQNNRHDIIKKVNTVLSEPVNYYIYRLDIKSFY ESIDKNIVFQRINNNPIISHNTKKFINGLFKHNAFSANNGLPRGMGLSATLSEIFMEEFD AELARLPEVFYASRYVDDIIVFSFYKIPDYKNYFSRILPNGLHLNERKCSEYTIEDTSTK HSEIEFLGYSFIIHHGLKNQRRHVVIRISEEKIKKIKRRIALAVKDYSNNSDAELLKKRI KYLTGNILVNSNSNKTDALYSGIYYNYQHITDKTQLKELDIFKNRMLFSSKGEVGRKILA AGHNLLTAPKKYSFLAGFEKRLLSSFKREDIIKINKVW >gi|299857017|gb|ADWS01000047.1| GENE 4 3357 - 4535 434 392 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 4 386 6 400 406 171 29 4e-42 MPLNDMQIRRAKPEDKPYTLGDGQGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT LADARSRRDEARKLVAEGKNPSDVRKEQKLALQAESENAFEKIAREWHQLKSAKWSAGYA SDIMEAFKNDIFPYVGTRPVSEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPEFLRALESYTGSKLVQIATKLLMITGV RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSTQALDLLHELKIMTGNYRYVFP GRNDPNKPMSEASINQVIKRIGYEGRLTGHGFRHMLSTILHEEGFQSAFIEVQLAHVDRN NIRGTYNHAIYLMERQKMMQWYSDYLRKKKGL >gi|299857017|gb|ADWS01000047.1| GENE 5 4889 - 6142 1433 417 aa, chain - ## HITS:1 COG:ECs0270 KEGG:ns NR:ns ## COG: ECs0270 COG0014 # Protein_GI_number: 15829524 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Escherichia coli O157:H7 # 1 417 1 417 417 771 98.0 0 MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLGE AMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGSVLDSGLRLERRRVPLGVIGVIYE ARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQDALKSCGLPAGAVQAIDNPD RALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESVEIAEALK VIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALAQLQAGPAK VVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIREHGTQHSDAILTRDMRNAQRFVNEVD SSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGIGDYTIRA >gi|299857017|gb|ADWS01000047.1| GENE 6 6154 - 7257 1087 367 aa, chain - ## HITS:1 COG:ECs0269 KEGG:ns NR:ns ## COG: ECs0269 COG0263 # Protein_GI_number: 15829523 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 692 100.0 0 MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHL GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDT LRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPR SNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPG VIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAGEITVDEGATAAILERGSSLLPKGI KSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVH RDDMITR >gi|299857017|gb|ADWS01000047.1| GENE 7 7545 - 8600 1042 351 aa, chain + ## HITS:1 COG:phoE KEGG:ns NR:ns ## COG: phoE COG3203 # Protein_GI_number: 16128227 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 351 1 351 351 625 100.0 1e-179 MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFG FKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALY DVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRD VKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDAN NIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDE DLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF >gi|299857017|gb|ADWS01000047.1| GENE 8 8639 - 9040 581 133 aa, chain - ## HITS:1 COG:no KEGG:SSON_0282 NR:ns ## KEGG: SSON_0282 # Name: crl # Def: DNA-binding transcriptional regulator Crl # Organism: S.sonnei # Pathway: not_defined # 1 133 1 133 133 266 100.0 2e-70 MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNVKPAPEVREFWGWWMEL EAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLREFHEKLRELLTTLNLKLEP ADDFRDEPVKLTA >gi|299857017|gb|ADWS01000047.1| GENE 9 9098 - 10342 1155 414 aa, chain - ## HITS:1 COG:yafA KEGG:ns NR:ns ## COG: yafA COG1073 # Protein_GI_number: 16128225 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 414 1 414 414 867 99.0 0 MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRG IDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQL SGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAP ITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWK LTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVV HTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLS GYWKNDPFSPEEDSRLITSSSGDGKLLEIPFNPVYRNFDKGLQEITDWIEKRLC >gi|299857017|gb|ADWS01000047.1| GENE 10 10434 - 10892 576 152 aa, chain - ## HITS:1 COG:ECs0265 KEGG:ns NR:ns ## COG: ECs0265 COG0503 # Protein_GI_number: 15829519 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 306 100.0 8e-84 MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCI SSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRP LVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR >gi|299857017|gb|ADWS01000047.1| GENE 11 11153 - 12610 1796 485 aa, chain + ## HITS:1 COG:ECs0264 KEGG:ns NR:ns ## COG: ECs0264 COG2195 # Protein_GI_number: 15829518 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 1 485 1 485 485 986 99.0 0 MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKP ATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGM ASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWLQADILINTDSEEEGEIYMGC AGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAE ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLAL LLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEI HCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFN KTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLK EIPAK >gi|299857017|gb|ADWS01000047.1| GENE 12 12667 - 13281 427 204 aa, chain - ## HITS:1 COG:STM0315 KEGG:ns NR:ns ## COG: STM0315 COG1186 # Protein_GI_number: 16763697 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Salmonella typhimurium LT2 # 1 201 1 201 204 323 81.0 1e-88 MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDG DNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADEQEQSDAIRYETLRSSGPG GQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLKSQR RMFHHQIERGNPRRTFTGMAFIEG >gi|299857017|gb|ADWS01000047.1| GENE 13 13278 - 14417 780 379 aa, chain - ## HITS:1 COG:PA5471 KEGG:ns NR:ns ## COG: PA5471 COG1690 # Protein_GI_number: 15600664 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 1 375 1 375 379 454 60.0 1e-127 MGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAF FSVGRFYPALVGNDIGCGMALWQTDILTRKYNADKFEKRLSDLDDVAEESWLEENLPSAF AQHPWRSSLGSIGGGNHFAELQQVDQIFNAELFALAGLDAQHLQLLVHSGSRGVGQSILQ RHIASFSHHGLPQGSDDALRYIAEHDDALAFACINRQMIALRIMQQVKATGSPVLDVAHN FVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWIVQPVANEKTLHSLAHGAGRKW GRTECKGRLAAKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVQAGLII PVARLRPVLTLKNSGGKKG >gi|299857017|gb|ADWS01000047.1| GENE 14 14663 - 15037 257 124 aa, chain - ## HITS:1 COG:yafP KEGG:ns NR:ns ## COG: yafP COG0454 # Protein_GI_number: 16128220 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 124 27 150 150 222 91.0 1e-58 MTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDMLFVDPE YTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGEWFINFYMRY KQQH >gi|299857017|gb|ADWS01000047.1| GENE 15 15112 - 16167 1008 351 aa, chain - ## HITS:1 COG:dinP KEGG:ns NR:ns ## COG: dinP COG0389 # Protein_GI_number: 16128217 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 351 1 351 351 710 99.0 0 MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTG MALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSAT LIAQEIRQTIFSELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAK IPGVGKVSAAKLEAMGLRTCGDVQKCDLVILLKRFGKFGRILWERSQGIDERDVNSERLR KSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQ EHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL >gi|299857017|gb|ADWS01000047.1| GENE 16 16238 - 17008 725 256 aa, chain - ## HITS:1 COG:ECs0256 KEGG:ns NR:ns ## COG: ECs0256 COG1360 # Protein_GI_number: 15829511 # Func_class: N Cell motility # Function: Flagellar motor protein # Organism: Escherichia coli O157:H7 # 1 256 6 261 261 473 98.0 1e-133 MIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVN EKTALLKKKSATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGS AQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEE AGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQP LVQKLDKQQVLSQRTR >gi|299857017|gb|ADWS01000047.1| GENE 17 16968 - 18707 1917 579 aa, chain + ## HITS:1 COG:ECs0257 KEGG:ns NR:ns ## COG: ECs0257 COG1298 # Protein_GI_number: 15829510 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhA # Organism: Escherichia coli O157:H7 # 1 579 1 579 579 1094 99.0 0 MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQT RPKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYV LMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRNQLLASPSVLYTATGIMFVLA VVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPL IEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYA IFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGY QVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSMAPRLAEDLSAALNYSQLLKV YRALLTEGVSLRDIVTIATVLVASSAVTKDHILLAADVRLALRRSITHPFVRKQELTVYT LNNELENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVP PQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALS >gi|299857017|gb|ADWS01000047.1| GENE 18 18812 - 19090 177 92 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_0269 NR:ns ## KEGG: ECIAI1_0269 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 92 8 99 99 184 100.0 9e-46 MIKVSALGSRHRKTFDDVMTEPPKSGIKWDDVVALIKAVGGTIKNNNGSRRKFQIGTTKF STHEPHPKNVMDKGAVAGLKEWFVNCVGVDYE >gi|299857017|gb|ADWS01000047.1| GENE 19 19083 - 19439 258 118 aa, chain + ## HITS:1 COG:ECs4356 KEGG:ns NR:ns ## COG: ECs4356 COG4226 # Protein_GI_number: 15833610 # Func_class: S Function unknown # Function: Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters # Organism: Escherichia coli O157:H7 # 3 115 5 117 119 106 43.0 1e-23 MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMA DCEEDGIAPFREEEEQKRLTLRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAHM >gi|299857017|gb|ADWS01000047.1| GENE 20 19496 - 20269 273 257 aa, chain - ## HITS:1 COG:ECs0254 KEGG:ns NR:ns ## COG: ECs0254 COG0791 # Protein_GI_number: 15829508 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli O157:H7 # 9 257 1 249 249 495 98.0 1e-140 MHDQPLLSMSLPSIPSFVLSGLLLLCLPFSSFASATTSHITFSYAARQRMQNRARLLKQY QTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSS DHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEAKLPRTANEMYH YHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRVSRLAEPFW QDHFLGARRILTEETIL >gi|299857017|gb|ADWS01000047.1| GENE 21 20455 - 20715 390 86 aa, chain + ## HITS:1 COG:dinJ KEGG:ns NR:ns ## COG: dinJ COG3077 # Protein_GI_number: 16128212 # Func_class: L Replication, recombination and repair # Function: DNA-damage-inducible protein J # Organism: Escherichia coli K12 # 1 86 1 86 86 144 98.0 4e-35 MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQ SIKNSEAGVDVHKAKDADDLFDKLGI >gi|299857017|gb|ADWS01000047.1| GENE 22 20718 - 20996 103 92 aa, chain + ## HITS:1 COG:yafQ KEGG:ns NR:ns ## COG: yafQ COG3041 # Protein_GI_number: 16128211 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 92 1 92 92 179 97.0 1e-45 MIQRDIEYSGQFSKDVKLAQKRHKDMNKLKYLMTLLINNALPLPAVYKDHPLQGSWKGYR DAHVEPDWILIYKLTDKLLRFERTGTHAALFG >gi|299857017|gb|ADWS01000047.1| GENE 23 21152 - 21892 846 246 aa, chain + ## HITS:1 COG:ECs0251 KEGG:ns NR:ns ## COG: ECs0251 COG3034 # Protein_GI_number: 15829505 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 491 100.0 1e-139 MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNA YDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTD ANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNY TLPEAK >gi|299857017|gb|ADWS01000047.1| GENE 24 21863 - 22630 642 255 aa, chain - ## HITS:1 COG:yafJ KEGG:ns NR:ns ## COG: yafJ COG0121 # Protein_GI_number: 16128209 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Escherichia coli K12 # 1 255 1 255 255 548 100.0 1e-156 MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPI AKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETG NFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRQKGVFNMLLSDGR YVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKI MPGEWRLFCLGERVV >gi|299857017|gb|ADWS01000047.1| GENE 25 22836 - 23414 752 192 aa, chain - ## HITS:1 COG:ECs0249 KEGG:ns NR:ns ## COG: ECs0249 COG0279 # Protein_GI_number: 15829503 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Escherichia coli O157:H7 # 1 192 1 192 192 373 100.0 1e-103 MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM HFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGIST SGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIH ILIQLIEKEMVK >gi|299857017|gb|ADWS01000047.1| GENE 26 23654 - 26098 2950 814 aa, chain + ## HITS:1 COG:yafH KEGG:ns NR:ns ## COG: yafH COG1960 # Protein_GI_number: 16128207 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli K12 # 1 814 13 826 826 1670 99.0 0 MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNF APMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRL TAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSA YAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKNHYLPRLARGQEIPCFAL TSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEK LLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAG QGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARI AGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQS NFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLF KHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGS LKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLL QNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHN PVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALAKGLIDKDEAAILVKAE ESRLRSINVDDFDPEELATKPVKLPEKVRKVEAA >gi|299857017|gb|ADWS01000047.1| GENE 27 26141 - 26614 562 157 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0244 NR:ns ## KEGG: EC55989_0244 # Name: ivy # Def: C-lysozyme inhibitor # Organism: E.coli_55989 # Pathway: not_defined # 1 157 1 157 157 290 99.0 1e-77 MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKATFNQMVQGHKLPAWV MKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQE KLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK >gi|299857017|gb|ADWS01000047.1| GENE 28 26768 - 27538 587 256 aa, chain + ## HITS:1 COG:ECs0246 KEGG:ns NR:ns ## COG: ECs0246 COG0388 # Protein_GI_number: 15829500 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 529 99.0 1e-150 MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQN DVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHY KAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAIYVANWPAPRSLHWQALLTAR AIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMVALREY REKFPAWQDADEFRLR >gi|299857017|gb|ADWS01000047.1| GENE 29 27580 - 28623 219 347 aa, chain - ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 347 32 378 378 693 98.0 0 MTIFAVISGAESWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFI NWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNE ITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFP LKELNNPEHDSYAMSEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIA EQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAE LFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAESGLS >gi|299857017|gb|ADWS01000047.1| GENE 30 29199 - 29945 318 248 aa, chain - ## HITS:1 COG:b1458 KEGG:ns NR:ns ## COG: b1458 COG5433 # Protein_GI_number: 16129417 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 248 1 248 248 467 99.0 1e-131 MSIQSLLDYISVIPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKK YGDFDNGIPVDDTIARVVSNIDSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKG KRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLNLLYLKKNLITIDAMGCQKDI ASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIV SNVTPELL >gi|299857017|gb|ADWS01000047.1| GENE 31 30126 - 30359 126 77 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0232 NR:ns ## KEGG: ECO103_0232 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 77 84 160 160 106 98.0 3e-22 MVDINLNFFNDILYSVRLKNISKLENMEFCAKKQRVYFSDKNKKASYKIINYGDYYDVDY YDNNLKNEVFDWIGKWS >gi|299857017|gb|ADWS01000047.1| GENE 32 30592 - 32586 1144 664 aa, chain - ## HITS:1 COG:rhsE KEGG:ns NR:ns ## COG: rhsE COG3209 # Protein_GI_number: 16129415 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 664 19 682 682 1278 94.0 0 VHYGYDDKGRLTGERQTVENPETGELLWQHETKHAYNEQGLANRVTPDSLPPVEWLTYGS GYLAGMKLGGTPLVEYTRDRLHRETVRSFGSMAGSNAAYELTSTYTPAGQLQSQHLNSLV YDRDYGWNDNGDLVRISGPRQTREYGYSATGRLESVRTLAPDLDIRIPYATDPAGNRLPD PELHPDSTLTAWPDNRIAEDAHYVYHYDEYGRLTEKTDRIPTGVIRTDDERTHYYHYDSQ HRLVFHTRIQHGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLSRKPEETWYGWDGD RLTTVQTDTTRIQTVYQPGSFAPLIRIETDNGEREKAQCRSLAEKIQQEGSEDGHGVVFP AELVGLLDRLEGKIRANCVSSESRQWLAQCGLTVERLAAQIEPVYLPERKIHLYHCDHRG LPLALISEDGNTAWSAEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRHRYYDP LQGRYITPDPIGLRGGWNMYQYPLNPIQVIDPMGLDAIENMTSGGLIYAVSGVPGLIAAN SITNSAYQFGYDMDAIVGGAHNGAADAMRHCYLMCRMTKTFGSTIADVIGKNHEAAGDRQ GQPAKERIMDLKNNTVGIACGDFSAKCSDACIEKYNTGQLFGLDGIKADNPIKAKQGSSD ASNY Prediction of potential genes in microbial genomes Time: Sun May 15 22:52:02 2011 Seq name: gi|299857016|gb|ADWS01000048.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont47.1, whole genome shotgun sequence Length of sequence - 31670 bp Number of predicted genes - 36, with homology - 34 Number of transcription units - 23, operones - 8 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 12 - 71 2.0 1 1 Tu 1 . + CDS 105 - 1205 843 ## COG0489 ATPases involved in chromosome partitioning - Term 1200 - 1230 5.0 2 2 Tu 1 . - CDS 1243 - 1632 184 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 1660 - 1719 4.4 3 3 Tu 1 . - CDS 1986 - 2201 97 ## - Prom 2340 - 2399 2.8 4 4 Op 1 27/0.000 + CDS 2335 - 3897 1655 ## COG0286 Type I restriction-modification system methyltransferase subunit + Prom 4226 - 4285 7.9 5 4 Op 2 11/0.000 + CDS 4305 - 5141 355 ## COG0732 Restriction endonuclease S subunits + Term 5159 - 5191 -0.9 + Prom 5146 - 5205 3.7 6 4 Op 3 . + CDS 5263 - 8379 2972 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases - Term 8294 - 8327 -0.7 7 5 Tu 1 . - CDS 8438 - 8914 344 ## HCM2.0104c putative DNA modification methylase - Prom 8945 - 9004 3.0 8 6 Tu 1 . - CDS 9018 - 9452 174 ## ECED1_1147 hypothetical protein - Prom 9481 - 9540 4.5 9 7 Op 1 . - CDS 9635 - 9916 157 ## ECH74115_3502 putative outer membrane protein - Term 9935 - 9962 -0.9 10 7 Op 2 . - CDS 9971 - 10540 359 ## HCM2.0105c hypothetical protein - Prom 10578 - 10637 2.8 - Term 10645 - 10676 4.1 11 8 Tu 1 . - CDS 10838 - 11263 568 ## COG3793 Tellurite resistance protein - Prom 11381 - 11440 5.0 - Term 11386 - 11434 -0.2 12 9 Tu 1 . - CDS 11555 - 12049 104 ## gi|293411969|ref|ZP_06654694.1| predicted protein - Term 12065 - 12100 7.2 13 10 Tu 1 . - CDS 12198 - 12668 191 ## COG0328 Ribonuclease HI - Prom 12867 - 12926 4.5 14 11 Tu 1 . - CDS 13374 - 13604 222 ## HCM2.111c hypothetical protein - Prom 13717 - 13776 7.1 - Term 13698 - 13770 15.5 15 12 Tu 1 . - CDS 13791 - 14384 162 ## HCM2.0112c hypothetical protein - Prom 14407 - 14466 8.2 - Term 14440 - 14488 8.2 16 13 Tu 1 . - CDS 14568 - 15377 414 ## HCM2.0113c hypothetical protein - Prom 15414 - 15473 4.1 - Term 15489 - 15527 8.1 17 14 Op 1 . - CDS 15535 - 16083 376 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 18 14 Op 2 . - CDS 16080 - 16874 209 ## Ping_1595 hypothetical protein 19 14 Op 3 . - CDS 16884 - 17303 248 ## HCM2.0115c hypothetical protein - Term 17769 - 17822 -0.1 20 15 Op 1 . - CDS 18009 - 18479 149 ## COG0262 Dihydrofolate reductase 21 15 Op 2 . - CDS 18482 - 18895 211 ## HCM2.0118c hypothetical protein 22 15 Op 3 . - CDS 18897 - 20027 759 ## COG0207 Thymidylate synthase - Prom 20069 - 20128 4.0 - Term 20137 - 20170 -1.0 23 16 Tu 1 . - CDS 20172 - 21041 531 ## HCM2.0120c hypothetical protein 24 17 Op 1 24/0.000 - CDS 21119 - 22261 856 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 22298 - 22357 4.1 - Term 22332 - 22362 3.4 25 17 Op 2 . - CDS 22368 - 24614 1457 ## COG0209 Ribonucleotide reductase, alpha subunit - Term 24704 - 24756 -0.7 26 18 Op 1 . - CDS 24757 - 25326 328 ## YPMT1.38c hypothetical protein 27 18 Op 2 . - CDS 25336 - 26079 104 ## HCM2.0124c hypothetical protein 28 18 Op 3 . - CDS 26069 - 26380 235 ## COG0419 ATPase involved in DNA repair - Prom 26473 - 26532 2.3 + Prom 26362 - 26421 2.7 29 19 Op 1 6/0.000 + CDS 26483 - 26908 198 ## COG2963 Transposase and inactivated derivatives 30 19 Op 2 5/0.000 + CDS 26905 - 27255 285 ## COG3436 Transposase and inactivated derivatives 31 19 Op 3 . + CDS 27286 - 28899 947 ## COG3436 Transposase and inactivated derivatives + Term 28900 - 28937 0.6 32 20 Tu 1 . - CDS 28903 - 29097 80 ## + Prom 29665 - 29724 2.3 33 21 Tu 1 . + CDS 29757 - 30410 473 ## p1ECUMN_0068 conserved hypothetical protein; putative membrane protein; putative CAAX amino terminal protease + Prom 30420 - 30479 5.3 34 22 Op 1 8/0.000 + CDS 30503 - 30760 269 ## COG2336 Growth regulator 35 22 Op 2 . + CDS 30762 - 31094 343 ## COG2337 Growth inhibitor + Prom 31273 - 31332 2.5 36 23 Tu 1 . + CDS 31379 - 31498 100 ## gi|9507664|ref|NP_052995.1| hypothetical protein R100p115 Predicted protein(s) >gi|299857016|gb|ADWS01000048.1| GENE 1 105 - 1205 843 366 aa, chain + ## HITS:1 COG:ECs2919 KEGG:ns NR:ns ## COG: ECs2919 COG0489 # Protein_GI_number: 15832173 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 2 366 15 379 379 689 95.0 0 MSESKSPDALRAMVAGTLANFQHPTLKHNLTTLKALHHVALMDDTLHVELIMPFVWNKPF EDLKEQCSGDLLRITGAKAIDWKLSYNIATLKRVKNQPGINGVKNIIAVSSGKGGVGKSS TAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSI GYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPVTGA VVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEKLAE KYNTQLLGQMPLHISLREDLDNGTPTVISRPDSEFTAIYRDLADRVAAQMYWQGEVIPGE IAFRAV >gi|299857016|gb|ADWS01000048.1| GENE 2 1243 - 1632 184 129 aa, chain - ## HITS:1 COG:STM2230 KEGG:ns NR:ns ## COG: STM2230 COG1974 # Protein_GI_number: 16765558 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Salmonella typhimurium LT2 # 1 129 39 167 167 202 70.0 1e-52 MGFPSPAADYAESRISLDQQIIRHPSATYFMRAADSHHREGILQGALLVVDSSLTPVDGS LLVCALDGEYRVKRYRKYPRQHLEDLRTGKKEALPKDDDGCTGSNAVFGVITHIINDARS GEFDDCPVM >gi|299857016|gb|ADWS01000048.1| GENE 3 1986 - 2201 97 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFGGAMVQYNDGEKVSIQSDGWYGLDSLQKTADKACQQYGKSKAVYQHSANANPHLTPGS GVQNTIWKCEP >gi|299857016|gb|ADWS01000048.1| GENE 4 2335 - 3897 1655 520 aa, chain + ## HITS:1 COG:NMA1038 KEGG:ns NR:ns ## COG: NMA1038 COG0286 # Protein_GI_number: 15793994 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Neisseria meningitidis Z2491 # 3 515 2 514 514 796 75.0 0 MKMTSIQQRAELHRQIWQIANDVRGSVDGWDFKQYVLGALFYRFISENFSSYIEAGDDSI CYAKLDDSVITDDIKDDAIKTKGYFIYPSQLFCNVAAKANTNDRLNADLNSIFVAIESSA YGYPSEADIKGLFADFDTTSNRLGNTVKDKNARLAAVLKGVEGLKLGDFNEHQIDLFGDA YEFLISNYAANAGKSGGEFFTPQHVSKLIAQLAMHGQTHVNKIYDPAAGSGSLLLQAKKQ FDDHIIEEGFFGQEINHTTYNLARMNMFLHNINYDKFDIKLGNTLTEPHFRDEKPFDAIV SNPPYSVKWIGSDDPTLINDERFAPAGVLAPKSKADFAFVLHALNYLSAKGRAAIVCFPG IFYRGGAEQKIRQYLVDNNYVETVISLAPNLFFGTTIAVNILVLSKHKTDTKVQFIDASE LFKKETNNNILTDAHIEQIMQVFASKEDVAHLAKSVAFETVVANDYNLSVSSYVEAKDTR EIIDIAELNAELKTTVSKIDQLRKDIDAIVAEIEGSEVQA >gi|299857016|gb|ADWS01000048.1| GENE 5 4305 - 5141 355 278 aa, chain + ## HITS:1 COG:HI0216 KEGG:ns NR:ns ## COG: HI0216 COG0732 # Protein_GI_number: 16272178 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Haemophilus influenzae # 20 270 139 384 385 317 63.0 1e-86 MVKGSTVYHLYAKDIGKLLIPIPCPNNPEKSLAIQSEIVRILDKFTALTAELTAELSMRK KQYNYYRDQLLSFKEGEVEWKALGEIGEVRMCKRILKSQTSSEGEIPFYKIGTFGKEPDS YISRKLFNEFKEKYSYPKVGEVLISASGTIGRTVIFDGRESYFQDSNIVWIENNEKIVLN KYLFYFYKIAKWGISEGGTIKRLYNDNLRKLMIPVPFPDSPERSLVEQQKIVKLLDKFDA LTNSITEGLPREIELRQKQYEYYRDLLFSFPKPETISN >gi|299857016|gb|ADWS01000048.1| GENE 6 5263 - 8379 2972 1038 aa, chain + ## HITS:1 COG:HI0218 KEGG:ns NR:ns ## COG: HI0218 COG0610 # Protein_GI_number: 16273673 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Haemophilus influenzae # 4 1038 3 1026 1026 1428 73.0 0 MTHQTHTIAESNNFIVLDKYIKAEQTGDSYQSESDLERELIQDLRNQGYEFISVKSQSAM LANVREQLQNLNGVVFNDSEWRRFTEQYLDNPSDGILDKTRKIHIDYICDFIFDDERLEN IYLIDKKNLMRNKVQIIQQFEQTGSHANRYDVTILVNGLPLVQIELKKRGVAIREAFNQI HRYSKESFNSENSLFKYLQLFVISNGTDTRYFANTTKRDKNSFDFTMNWAKSDNTLIKDL KDFTATFFQKHTLLNVLVNYSVFDVSQTLLVMRPYQIAATERILWKIKSSFTAKNWSKPE SGGYIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTMNEYKRFSPDSVNG SENTAGLKRNLDKDDNKIIVTTIQKLNNLMKAESDLPVYNQQVVFIFDECHRSQFGEAQK NLKKKFKRYYQFGFTGTPIFPENALGSETTASVFGRELHSYVITDAIRDEKVLKFKVDYN DVRPQFKSLETETDEKKLSAAENQQAFLHPMRIQEITQYILNNFRQKTHRTFPGSKGFNA MLAVSSVDAAKAYYATFKRLQEEAANKSATYKPLRVATIFSFAANEEQNAIGEISDETFD TSAMDSSAKEFLDAAIREYNSYFKTNFSTDSNGFQNYYRDLAQRVKNQDIDLLIVVGMFL TGFDAPTLNTLFVDKNLRFHGLMQAFSRTNRIYDATKTFGNIVTFRDLERSTIDAITLFG DKNTKNVVLEKSYAEYMEGFTDAATGEAKRGFMAVVSELEQRFPDPASIESEKEKKDFVK LFGEYLRAENILQNYDEFATLKALQQIDLSDPVAVEKFKAEHYVDDEKFAELQTIRLPAE RKIQDYRSAYNDIRDWQRREKEAEKKEKSTTDWDDVVFEVDLLKSQEINLDYILGLIFEH NRQNKGKGEMIEEVKRLIRSSLGNRAKEGLVVDFIQQTNLDDLPDKASIIEAFFTFAQRE QQREAEALIKEENLNEEAAKRYIRTSLKREYATENGTELNETLPKLSPLNPQYKTKKQTV FQKIVTFIEKFKGVGGQI >gi|299857016|gb|ADWS01000048.1| GENE 7 8438 - 8914 344 158 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0104c NR:ns ## KEGG: HCM2.0104c # Name: not_defined # Def: putative DNA modification methylase # Organism: S.typhi # Pathway: not_defined # 1 158 7 164 567 296 89.0 1e-79 MNTALSIIDDTNSNTAIDYRQEMNVIHEIVAECEKEIAFMYQVHDFVYGDERHNMINRLL QLNHRPDEERSRLNRAWLDKVDLEWVKQNIWAEYWRKVTDMTNVLLIMPASRRDEWREQF IEGKQEVIKTDRTGYQMKVKEFVGVPEFKVDTNIPTMV >gi|299857016|gb|ADWS01000048.1| GENE 8 9018 - 9452 174 144 aa, chain - ## HITS:1 COG:no KEGG:ECED1_1147 NR:ns ## KEGG: ECED1_1147 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 144 64 208 208 181 60.0 6e-45 MFIHEHSNGYNALRLHQVNGSPGTITVYAFSDMVLPHSGYGIAMYNSAGAMVYHGEMMPL DAKLITITDPQFTIDMGYPCAVMPAMVGVYNYRRTDYDRPVYVTMTGATGNQVYNGQWYS GNVTWDIKKIYTNKILVINTSKYD >gi|299857016|gb|ADWS01000048.1| GENE 9 9635 - 9916 157 93 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_3502 NR:ns ## KEGG: ECH74115_3502 # Name: not_defined # Def: putative outer membrane protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 93 1 92 92 110 65.0 1e-23 MAYGTGIYNNKGINVTGFLTPIFFLDRFTASSGSKTYSNPPPGKSLHAVWSLMPLNNDNY INLPVPNVTINGNTVSWSNLYTGLGSYIYTYWG >gi|299857016|gb|ADWS01000048.1| GENE 10 9971 - 10540 359 189 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0105c NR:ns ## KEGG: HCM2.0105c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 183 1 184 190 199 61.0 3e-50 MCKKCKAIADEQNALFEEMDANELVKMLAILRGIEDVSIFERVVTALNFESTFEEPTQVV ALAHHFGVHYLAEKERADKLQATLDMVSETQRTDDTNKSEAIIASKDREIAGLKSSLTML MSAFNLMSSQAGYKMPSLNSDDPMAVRQLLGAMADQLDDTKSRLEDMMRELSHRHNLATQ PHKVFQSSN >gi|299857016|gb|ADWS01000048.1| GENE 11 10838 - 11263 568 141 aa, chain - ## HITS:1 COG:Z2379 KEGG:ns NR:ns ## COG: Z2379 COG3793 # Protein_GI_number: 15801792 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein # Organism: Escherichia coli O157:H7 EDL933 # 1 141 22 164 164 95 41.0 2e-20 MLGFFKKKTRKAVIEVKKMENRDAVEATVWGGYMISYANGTCDAKEISILEKTIAALPAF SPFAGEIAQMSANIRAQYEASPRRANAQALRELADVAGTDDAVDVLCLCLDIADQDGIDE PEEQALKKIAQALQLSLDAYL >gi|299857016|gb|ADWS01000048.1| GENE 12 11555 - 12049 104 164 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293411969|ref|ZP_06654694.1| ## NR: gi|293411969|ref|ZP_06654694.1| predicted protein [Escherichia coli B354] # 1 164 1 164 164 261 94.0 7e-69 MARQTYFTSATKRPRSLRQILAELFSGRVMSRLDELETTVRLLNERLDNQASVVANVGAI VASGSSREAKSTRPLVKEKNNKDSSNGKFSKKEAETNGLRSHYSFTGDGSRSSRPEPFDA GFIHHHTSVDDNYHHSSRASCHSGWDDGGCDTSSSSSYSGSCCD >gi|299857016|gb|ADWS01000048.1| GENE 13 12198 - 12668 191 156 aa, chain - ## HITS:1 COG:ECs0210 KEGG:ns NR:ns ## COG: ECs0210 COG0328 # Protein_GI_number: 15829464 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Escherichia coli O157:H7 # 1 152 5 151 155 187 58.0 5e-48 MKIFSDGSCLKNPGGPGGYGIVLQYGGEEREFSDGFHSTTNNRMEMMGALIGLERLKYPC NVILYSDSQYLKNGMTQWMKWWKRNGWMTSDKKPVKNVDLWKRLDEAASRHNVRWKWVKG HAGHRENEICDRLAKIAAFSAADMPHKKDIGFVYNK >gi|299857016|gb|ADWS01000048.1| GENE 14 13374 - 13604 222 76 aa, chain - ## HITS:1 COG:no KEGG:HCM2.111c NR:ns ## KEGG: HCM2.111c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 76 1 76 76 126 84.0 3e-28 MSYPTNVVALVESDFLAQAREMMKDREQAFNLYEWAIKCLHLGEHRELVEQLLGELINEV FALNVQLHGRKNNQSK >gi|299857016|gb|ADWS01000048.1| GENE 15 13791 - 14384 162 197 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0112c NR:ns ## KEGG: HCM2.0112c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 197 1 197 197 361 85.0 7e-99 MIAAEKIKQRKRDNSLRDLWRTPDWLFSAIQRYLGVTFDVDVACNKDNAKLPNFIGVERD ALKSEWGQPGTIAFLNPPYSKISPWIDAAIREQARGVTTVMLIPQSLDTKWYERATECAN ETIILSGGRVAFVEPDVNLGQVEVNINPGGSMLVVFRGFCQDAGHSISKIPLDVMKSLGG YDPANVIRKKRPSKKAA >gi|299857016|gb|ADWS01000048.1| GENE 16 14568 - 15377 414 269 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0113c NR:ns ## KEGG: HCM2.0113c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 269 29 308 308 276 58.0 4e-73 MSSVENVMTNDDLDELTAMLQSLDEPVKKAAQVENTDDIDDLLLGLDAGVAMSSDDVAEE LFNEEKAGDFSSALNELELAHEPINVINAESVEAAENEPEQLGFIEVEECVEVNDELKVQ QSNDSNTNKKARTARGPRFTLSDKDDSFFNKAGLEKDIFLDAYDNAPVKAKDKILNLLNW FSGGPDISVYTVISMRHLLTEKKATSNSIKIALMSNPEKPYPLNTASTQAGQMMAVFPAT GIAVRDGGNLTLNEESPIVKKFVAEYTIG >gi|299857016|gb|ADWS01000048.1| GENE 17 15535 - 16083 376 182 aa, chain - ## HITS:1 COG:RSc1872 KEGG:ns NR:ns ## COG: RSc1872 COG0847 # Protein_GI_number: 17546591 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Ralstonia solanacearum # 6 166 6 166 242 73 33.0 2e-13 MIATGVDIESTGLDFLSGHKIIEIAMVKYEIETQTMVDSFVMRFNPRRSIDPKAQAVHGI SLEDLAAEPLLADHASSVASYLSSSDIWIAHNGEAFDIPFIRHELKSYGFSLPDIPLIDT LFSLWATEDGKRPRLEELAFSLGFIYDHAKAHSALYDTNLMMQCFFKARNKYGFFKLPSE IV >gi|299857016|gb|ADWS01000048.1| GENE 18 16080 - 16874 209 264 aa, chain - ## HITS:1 COG:no KEGG:Ping_1595 NR:ns ## KEGG: Ping_1595 # Name: not_defined # Def: hypothetical protein # Organism: P.ingrahamii # Pathway: not_defined # 6 260 14 279 283 167 38.0 3e-40 MGQPVDITGKRFGKLVALKYSGISNKQGRLWDCICDCGNTCLVSYGKLNHGATISCGCVY NAHRRSVNPHGMSKTPIYRIWLGMRERCEKPTHHAYKWYGGRGIKVCERWQIFENFYADM GERPEGMSLDRKDVNGDYEPENCRWATFEEQANNTRSNLILEHKGEKLTLSQWAKRAEIQ TSTLHYRIKKGWPLDRALNASVDTYANRDSKRLIECRGRTQRITEWAREVGLTATIISQR ILRGWDVEAAIFTPSKRPVKGDKK >gi|299857016|gb|ADWS01000048.1| GENE 19 16884 - 17303 248 139 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0115c NR:ns ## KEGG: HCM2.0115c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 139 1 139 139 204 73.0 7e-52 MFSEMLLEDELDRKTTEALIRVADEHSRSLMSDREARLAIRAIFETAQGLVGTQVGEAIN IAMSQFSEDSKKPLFPMHLMLAGGTVLYVSVCLDSNQINILNTASGKWKDPVVCETSEET LKKAAQFVRSALLKGAKKL >gi|299857016|gb|ADWS01000048.1| GENE 20 18009 - 18479 149 156 aa, chain - ## HITS:1 COG:XF2331 KEGG:ns NR:ns ## COG: XF2331 COG0262 # Protein_GI_number: 15838922 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Xylella fastidiosa 9a5c # 1 121 27 153 188 98 46.0 4e-21 MIAAVGRNYEIGIANELPWRCSTDLKLFKRLTKNATVVMGRKTMESLKRPLPERHNLVLT RSHGFVPNGFYPAGVDDVLRLPEPVWVIGGEQIYSLFMPHVEEIWLSHIGVDVPNADAFF PASMMRNLGFVPVETAYTQRASEEEPGFSQIVYRRS >gi|299857016|gb|ADWS01000048.1| GENE 21 18482 - 18895 211 137 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0118c NR:ns ## KEGG: HCM2.0118c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 137 1 137 137 239 86.0 3e-62 MARGMYVLCEIEGVLANTSHRKSVSDSDAGQFIAGDELIFPTSRMLRGFARSGAEVVLIS SRSETLEAPTKRWLKDFGVDYDWLHLVPNSTSYEKHIKRTLAEHKGDLLIAALVHDPRLR AALADSHHRPVIYEVSK >gi|299857016|gb|ADWS01000048.1| GENE 22 18897 - 20027 759 376 aa, chain - ## HITS:1 COG:STM3001 KEGG:ns NR:ns ## COG: STM3001 COG0207 # Protein_GI_number: 16766303 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Salmonella typhimurium LT2 # 28 376 4 264 264 196 34.0 9e-50 MVTYLCEVFVSLLLNREHTNGQVTNASYAKVIETVLKSGVQADDRTGTGTLSTCYVPSYY MLTGGTVPLISGKAVNLKPLLVELEWYLKGTGNIQFLKDNGVKIWDAWADENGDLGPVYG KQWRRWEDTRIVSHSEYLSKIATFRERGYKVEGYLGISEDRVVLSREIDQLQRIVDTLRM NPTDRRIMLNAWNVGELEDMKLPPCHFVFSLWSRELDFETRLTMATDIGLQHSRLGYESI YTKMLYDLEIDGSVTEAELDELGIPKRILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAK ITGHMAGAFVHFGFDVHLYNNHMEGVCELMQRQAPEHSDPVVIFPNEWSELDDFKWDEIL ILGYAPLPWIKVPVAV >gi|299857016|gb|ADWS01000048.1| GENE 23 20172 - 21041 531 289 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0120c NR:ns ## KEGG: HCM2.0120c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 288 1 288 309 488 81.0 1e-136 MNFTKLTDHLKLATDRLIGFKPEPYELHEGHGVATESIYKMVDQFHELFQHPRRVMPTPE LLRLRASLIHEEAVVEGIPAAMNGDIEQLLDAMADFLYVGVGTMVAIKGGISTGMTYYTQ EQSIDRFMQTIFVPGNTVFDDMAMPFQEAREASCMLEELADKLEKKTVKDSELIQELRRV MNKIYVACMMTYRLADFLGINVVELVGEIHRSNMTKLWPADAEERRHAVANCKYDSSDLG FRHADGTDKMIGFRISDGKILKSPTYSDVDLSSFVEQAKASAMYGMIKK >gi|299857016|gb|ADWS01000048.1| GENE 24 21119 - 22261 856 380 aa, chain - ## HITS:1 COG:PM0719 KEGG:ns NR:ns ## COG: PM0719 COG0208 # Protein_GI_number: 15602584 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Pasteurella multocida # 1 377 1 374 376 446 59.0 1e-125 MSYSTFRLGANDATKEPMFLGQSVNVARYDQQKYRDFEKLIERQLSFFWRPEEVDISSDR IDFNTKLRDHERHIFLSNLRYQTLLDSVQGRSPNATLLPLISIPELETWVETWSFSETIH SRSYTHIIRGMVDDPSIVFDGIVTDEEIINRAISISAEYDRLYGMTCERQSLGEKEFERL YVNEYGWEPYPLHRQLFRTLVSINALEAIRFYVSFACTFAFGERKLLEGNTKIMRFIARD EALHCEGTERMIRFMRTGREGLLWKEIAADEENVIYDTMKSVAEQEMNWADYLFKDGSMI GLNADILKTYVKYRTNLAMNRLGLKALFPEVTTDPLVWMNKWLLTDTLQIAPQEAEQSTY LVGQIDSTVDKASLSQFADL >gi|299857016|gb|ADWS01000048.1| GENE 25 22368 - 24614 1457 748 aa, chain - ## HITS:1 COG:STM2277 KEGG:ns NR:ns ## COG: STM2277 COG0209 # Protein_GI_number: 16765604 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Salmonella typhimurium LT2 # 2 748 28 761 761 962 63.0 0 MYGVEGIRGVSASAVAMGAAASIFDGMTTSQLHEALVKSAADLISPEAPNYSQVAARLNI FKIRKDAFGRYDYPNFYQHIVKNVNKGVYDKDLLTHYSFEEIEELGNYIKPKRDDLFGYA ATVQLQSKYLVQNRVTGEIHEGPQHIYMLVGMCLFQNWEDDCAGKTRMEMVKGFYDVTST FKLSLPTPIMAGVRTPTRQFSSCVLIESGDSLKGISAASAAIIDYVSRRAGIGIGFGRIR ALGSEIRNGEATHTGVIPFLKHFQTAVKSCSQGGVRGGAATAFYPIWHLEVESLLVVKNN RGIDENRVRHLDYGVMSNRLMYRRLVRSENITLFSPHDVPDMYEAFFTDQELFEKLYHKY EADDSIRKKSVPAIELFSSLMQERASTGRIYIANVDHINEHGAFIPALAPVRQSNLCMEI TLPTRPLAFTDDPNGEIALCTLSAFNLGAIRSLESLKEVAFYAVAALDSLLDYQDYPMEA AEVPAKARRSLGIGVTNFAYYLAKNGVRYSDTAGNKLVHETFEAIQYYLLDASCRLAEAK GECDWFEQTKYAIGQLPIDHYRSSLDESGETNFELKMPWEELRERIAKYGLRNSTLTAQM PCETSSQITNSTNGIEPPRGPVSVKSSKDGIVKMVVPEFEKLKEQYEYLWDMPDNRGYLT KVAIIQKFFDQAISANTNYDPSRFEGDKVPMMTLLSDLLLAYKMGVKTLYYHNTRDGAGK RDDDEPQNPLAQAVAVEPEDECDGACKI >gi|299857016|gb|ADWS01000048.1| GENE 26 24757 - 25326 328 189 aa, chain - ## HITS:1 COG:no KEGG:YPMT1.38c NR:ns ## KEGG: YPMT1.38c # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis # Pathway: not_defined # 1 189 1 189 189 337 86.0 2e-91 MSKKISVVGVDPSMSNFGLAVGTLDLETDELEIHGLTLVETKAGSNKKTVRVNSDDLRRA SEIWRVAKPIIDKANMVFCELPVGSQNSRSQTSYGICIGVLACVDKPLIQVTPNEIKHFV GNKLTTSKEEIIQWATKKHPKAPWLRRKQSGQDVLVNKNEHLADAVAAIHTGMQTDQFRQ VRDVLKSLI >gi|299857016|gb|ADWS01000048.1| GENE 27 25336 - 26079 104 247 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0124c NR:ns ## KEGG: HCM2.0124c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 247 1 248 248 212 47.0 1e-53 MSFKLSRSQFLQVFAVMQSIKLINGHTSNGAAPRILWGSNNIDGVQFAALLGLISETPLM QSLKSLPPGCIAPILINPFVEGGYLPNVGPGFIASHETEDLNINSEGFFGGMGAHHCMAF TNLIRLANKRVDSLASPGDAFTGFLIQRRDKKYSADKLQFVGKYGEMVEIELQLPHVLAN DSADSRRLLGIMRHFIASGVKHAADKRVTQENEYSDFANYPQPTLQTAIVANSLEARLLE NPIWGTW >gi|299857016|gb|ADWS01000048.1| GENE 28 26069 - 26380 235 103 aa, chain - ## HITS:1 COG:YPMT1.40c KEGG:ns NR:ns ## COG: YPMT1.40c COG0419 # Protein_GI_number: 16082825 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Yersinia pestis # 3 103 538 638 638 173 93.0 6e-44 MQKKGSSKSFQTLSGGEKRKVRIACSLALQDLVSNRASKNIDLFIGDEIDDALDTAGLER LMGILESKARERGTVLIISHKEMKSWFRETITLEVKEGRSYVV >gi|299857016|gb|ADWS01000048.1| GENE 29 26483 - 26908 198 141 aa, chain + ## HITS:1 COG:ECs1393 KEGG:ns NR:ns ## COG: ECs1393 COG2963 # Protein_GI_number: 15830647 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 243 91.0 8e-65 MELQDWRKEPRKNYSNEFKLRMVELASQPGACVAQIARENGVNDNVIFKWLRLWQNEGRV SRRLPVTTSSDTGVELLPVEITPDEQKEPVAAIAPSLSTSTQTRVSASSCKVEFRHGNMT LENPSPELLTVLIRELTGRGR >gi|299857016|gb|ADWS01000048.1| GENE 30 26905 - 27255 285 116 aa, chain + ## HITS:1 COG:ECs3868 KEGG:ns NR:ns ## COG: ECs3868 COG3436 # Protein_GI_number: 15833122 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 116 1 116 116 224 96.0 3e-59 MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLNDNPFSGHLFIFRGRRGDTVKILWAD ADGLCLFTKRLEEGQFIWPAVRDGKVSITRSQLAMLLDKLDWRQPKTSSRNSLTML >gi|299857016|gb|ADWS01000048.1| GENE 31 27286 - 28899 947 537 aa, chain + ## HITS:1 COG:ECs1339 KEGG:ns NR:ns ## COG: ECs1339 COG3436 # Protein_GI_number: 15830593 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 537 1 537 537 974 95.0 0 MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALTRAEEKIEEDEREIEH LRAQIEKLRRMLFGTRSEKLRREVELAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHR RPLPAHLPREIHRLEPEESCCPECGGKLDYLGEVSAEQLELVSSALKVIRTERVKKACTK CDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNW VDACCQLMTPVNDALYRYVMNTRKIHTDDTPVKVLAPGQKKAKTGRIWTYVRDDRNVGSS SPPAVWFAYSPNRQGKHPEQHLRPFRGILQADAFTGYDRLFSAEREGGALTEVACWAHAR RKIHDVYISSKSATAEEALKRISELYAIEDEIRGLPESERLAVRQQRSKVLLTSLHEWMV EKNGTLSKKSRLGEAFSYVLNQWDALCYYSDDGLAEADNNAAERALRAVCLGKKNFMFFG SDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK >gi|299857016|gb|ADWS01000048.1| GENE 32 28903 - 29097 80 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFKRYIAPCRADGWRFMTLTIVTLWGSPLQFNVDKQNYPSVRRVLYQKQGGPDAPEVSVN GAPY >gi|299857016|gb|ADWS01000048.1| GENE 33 29757 - 30410 473 217 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0068 NR:ns ## KEGG: p1ECUMN_0068 # Name: not_defined # Def: conserved hypothetical protein; putative membrane protein; putative CAAX amino terminal protease # Organism: E.coli_UMN026 # Pathway: not_defined # 1 217 1 217 217 362 100.0 5e-99 MIQTRNQYLQFMLVMLAAWGISWGARFVMEQAVLLYGSGKNYLFFSHGTVLMYLLCVFLV YRRWIAPLPVVGQLRNVGVPWLVGAMAVVYVGVFLLGKALALPAEPFMTKLFADKSIPDV ILTLLTIFILAPLNEETLFRGIMLNVFRSRYCWTMWLGALITSLLFVAAHSQYQNLLTLA ELFLVGLITSVARIRSGGLLLPVLLHMEATTLGLLFG >gi|299857016|gb|ADWS01000048.1| GENE 34 30503 - 30760 269 85 aa, chain + ## HITS:1 COG:AGc1711 KEGG:ns NR:ns ## COG: AGc1711 COG2336 # Protein_GI_number: 15888279 # Func_class: T Signal transduction mechanisms # Function: Growth regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 85 19 103 103 64 38.0 4e-11 MHTTRLKRVGGSVMLTVPPALLNALSLGTDNEVGMVIDNGRLIVEPYRRPQYSLAELLAQ CDPNAEISAEEREWLDAPATGQEEI >gi|299857016|gb|ADWS01000048.1| GENE 35 30762 - 31094 343 110 aa, chain + ## HITS:1 COG:ECs5203 KEGG:ns NR:ns ## COG: ECs5203 COG2337 # Protein_GI_number: 15834457 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Escherichia coli O157:H7 # 2 109 8 115 116 85 44.0 2e-17 MERGEIWLVSLDPTAGHEQQGTRPVLIVTPAAFNRVTRLPVVVPVTSGGNFARTAGFAVS LDGVGIRTTGVVRCDQPRTIDMKARGGKRLERVPETIMNEVLGRLSTILT >gi|299857016|gb|ADWS01000048.1| GENE 36 31379 - 31498 100 39 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|9507664|ref|NP_052995.1| ## NR: gi|9507664|ref|NP_052995.1| hypothetical protein R100p115 [Plasmid R100] # 1 31 1 31 436 63 100.0 4e-09 MANENLDIDSKTAEELYEWYLDDKLIINRRYGDAANLLI Prediction of potential genes in microbial genomes Time: Sun May 15 22:53:12 2011 Seq name: gi|299857015|gb|ADWS01000049.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont48.1, whole genome shotgun sequence Length of sequence - 27620 bp Number of predicted genes - 25, with homology - 25 Number of transcription units - 11, operones - 4 average op.length - 4.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 426 99.0 # CP000800 [D:227600..230523] # 23S ribosomal RNA # Escherichia coli E24377A # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. + 5S_RRNA 507 - 637 99.0 # EU285519 [D:5957..6097] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. + TRNA 830 - 906 90.7 # Asp GTC 0 0 + Prom 833 - 892 80.4 1 1 Tu 1 . + CDS 1069 - 1872 1108 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 1881 - 1914 3.8 - Term 1792 - 1833 5.2 2 2 Tu 1 . - CDS 1869 - 2783 513 ## COG0583 Transcriptional regulator - Prom 2824 - 2883 4.1 + Prom 2906 - 2965 5.7 3 3 Op 1 4/0.714 + CDS 3045 - 3824 471 ## COG3021 Uncharacterized protein conserved in bacteria 4 3 Op 2 . + CDS 3902 - 4672 447 ## COG0500 SAM-dependent methyltransferases + Term 4674 - 4720 8.2 - Term 4653 - 4714 10.5 5 4 Op 1 8/0.429 - CDS 4720 - 6078 786 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 6 4 Op 2 . - CDS 6150 - 6905 397 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 7071 - 7130 2.7 + Prom 6849 - 6908 3.8 7 5 Tu 1 . + CDS 6939 - 7661 395 ## COG0500 SAM-dependent methyltransferases - Term 7593 - 7647 6.0 8 6 Tu 1 . - CDS 7658 - 8125 455 ## COG0328 Ribonuclease HI - Prom 8148 - 8207 2.2 + Prom 8086 - 8145 4.3 9 7 Tu 1 . + CDS 8181 - 8921 783 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Term 9153 - 9204 10.2 + TRNA 9054 - 9130 90.7 # Asp GTC 0 0 + Prom 9356 - 9415 6.1 10 8 Tu 1 . + CDS 9460 - 10245 578 ## ECO103_0210 putative aminopeptidase - Term 10298 - 10335 -0.1 11 9 Op 1 . - CDS 10382 - 10861 -75 ## ECO103_0211 hypothetical protein 12 9 Op 2 . - CDS 10871 - 11785 81 ## EC55989_0217 inner membrane protein YafU 13 9 Op 3 2/0.857 - CDS 11829 - 12311 344 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 14 9 Op 4 5/0.571 - CDS 12335 - 13687 1358 ## COG3515 Uncharacterized protein conserved in bacteria 15 9 Op 5 5/0.571 - CDS 13698 - 17222 3090 ## COG3523 Uncharacterized protein conserved in bacteria 16 9 Op 6 . - CDS 17241 - 18653 1157 ## COG3515 Uncharacterized protein conserved in bacteria 17 9 Op 7 . - CDS 18658 - 19305 522 ## ECO103_0217 hypothetical protein 18 9 Op 8 4/0.714 - CDS 19398 - 22259 518 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 19 10 Op 1 8/0.429 - CDS 22390 - 23028 586 ## COG3455 Uncharacterized protein conserved in bacteria 20 10 Op 2 8/0.429 - CDS 23033 - 24364 1063 ## COG3522 Uncharacterized protein conserved in bacteria 21 10 Op 3 6/0.571 - CDS 24367 - 24891 516 ## COG3521 Uncharacterized protein conserved in bacteria 22 10 Op 4 6/0.571 - CDS 24888 - 26168 874 ## COG3456 Uncharacterized conserved protein, contains FHA domain 23 10 Op 5 9/0.143 - CDS 26193 - 27275 748 ## COG3520 Uncharacterized protein conserved in bacteria 24 10 Op 6 . - CDS 27239 - 27457 116 ## COG3519 Uncharacterized protein conserved in bacteria 25 11 Tu 1 . + CDS 27471 - 27618 79 ## COG2963 Transposase and inactivated derivatives Predicted protein(s) >gi|299857015|gb|ADWS01000049.1| GENE 1 1069 - 1872 1108 267 aa, chain + ## HITS:1 COG:yafB KEGG:ns NR:ns ## COG: yafB COG0656 # Protein_GI_number: 16128194 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli K12 # 1 267 1 267 267 506 98.0 1e-143 MAIPAFGLGTFRLKDDVVISSVKTALELGYRAIDTAQIYDNEAAVGQAIAESGVPRHELY ITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQ GLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMT LAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRKNLESNLKAQNLQLD AKDKKAIAALDCNDRLVSPKGLAPEWD >gi|299857015|gb|ADWS01000049.1| GENE 2 1869 - 2783 513 304 aa, chain - ## HITS:1 COG:yafC KEGG:ns NR:ns ## COG: yafC COG0583 # Protein_GI_number: 16128195 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 304 1 304 304 577 100.0 1e-164 MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLT EEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERYP EVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLFNSYRKIIASPDYISRYGKPE TIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGLSSNSGETLKQLCLSGNGIACLS DYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHVKTAPGGA VREA >gi|299857015|gb|ADWS01000049.1| GENE 3 3045 - 3824 471 259 aa, chain + ## HITS:1 COG:ECs0205 KEGG:ns NR:ns ## COG: ECs0205 COG3021 # Protein_GI_number: 15829459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 259 8 266 266 511 99.0 1e-145 MRYIAGQPAERILPPGSFASIGQALPPGEPLSTEERIRILVWNIYKQQRAEWLSVLKNYG KDAHLVLLQEAQTTPELVQFATANYLAADQVPAFVLPQHPSGVMTLSAAHPVYCCPLRER EPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYSKQLLPIGDQIAHHSGPVIM AGDFNAWSRRRMNALYRFAREMSLRQVRFTDDQRRRAFGRPLDFVFYRGLNVSEASVLVT RASDHNPLLVEFSPGKPDK >gi|299857015|gb|ADWS01000049.1| GENE 4 3902 - 4672 447 256 aa, chain + ## HITS:1 COG:ECs0206 KEGG:ns NR:ns ## COG: ECs0206 COG0500 # Protein_GI_number: 15829460 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 475 96.0 1e-134 MTTQSHHDHVEKQFSSQASEYLTSTVHASGRDLQRLAVRLADYPDTSVLDMGCGAGHASF VAAQNVSAVVAYDLSAQMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSA HHWHDVGAALREVNRILKPGGRMIVMDVMSPGHPVRDIWLQTVEALRDTSHVRNYASGEW LRLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVDAIRIYQQSASTEVRTYFALQND GSFTSDIIMVEAHKAA >gi|299857015|gb|ADWS01000049.1| GENE 5 4720 - 6078 786 452 aa, chain - ## HITS:1 COG:dniR KEGG:ns NR:ns ## COG: dniR COG0741 # Protein_GI_number: 16128198 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli K12 # 1 452 1 452 452 857 100.0 0 MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGDLW AFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVL LPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRL NKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDI LKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGAS GPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVRSGDTLSSIASRLGV STKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVN IKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS >gi|299857015|gb|ADWS01000049.1| GENE 6 6150 - 6905 397 251 aa, chain - ## HITS:1 COG:ECs0208 KEGG:ns NR:ns ## COG: ECs0208 COG0491 # Protein_GI_number: 15829462 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 518 99.0 1e-147 MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVG GVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSK PYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTLVCCAHEYTLSNMKFALSILP HDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEER FAWLRSKKDRF >gi|299857015|gb|ADWS01000049.1| GENE 7 6939 - 7661 395 240 aa, chain + ## HITS:1 COG:ECs0209 KEGG:ns NR:ns ## COG: ECs0209 COG0500 # Protein_GI_number: 15829463 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 240 7 246 246 481 99.0 1e-136 MKPARVPQTVVAPDRWGDLPWGELYRKALERQLNPWFTKMYGFHLLKIGNLSAEINCEAC AVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPWCTDPHRLLRETDRVLIDD GWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQLDWLSLLNFEVLHASRFHVLP WNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQSKNKPRIRQAVGATRQCRKPQA >gi|299857015|gb|ADWS01000049.1| GENE 8 7658 - 8125 455 155 aa, chain - ## HITS:1 COG:ECs0210 KEGG:ns NR:ns ## COG: ECs0210 COG0328 # Protein_GI_number: 15829464 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 313 99.0 8e-86 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALK EHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEW VKGHAGHPENERCDELARAAAMNPTLDDTGYQVEV >gi|299857015|gb|ADWS01000049.1| GENE 9 8181 - 8921 783 246 aa, chain + ## HITS:1 COG:dnaQ KEGG:ns NR:ns ## COG: dnaQ COG0847 # Protein_GI_number: 16128202 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli K12 # 4 246 1 243 243 484 99.0 1e-137 MTAMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRL VDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRD IPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLA MTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFATDEELAAHEARLDLVEKKGG SCLWRA >gi|299857015|gb|ADWS01000049.1| GENE 10 9460 - 10245 578 261 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0210 NR:ns ## KEGG: ECO103_0210 # Name: yafT # Def: putative aminopeptidase # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 261 1 261 261 487 99.0 1e-136 MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTPQQLTDKDLFGNETTLA VSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMRKYYTVSTLSGIPDRQKPL TCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIVYQDTLQTGKYDSALKSTVWS DYKNEKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQ IMQLKQKTYKAMVKDLVNRYQ >gi|299857015|gb|ADWS01000049.1| GENE 11 10382 - 10861 -75 159 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0211 NR:ns ## KEGG: ECO103_0211 # Name: ykfM # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 159 1 159 159 276 99.0 2e-73 MRLHVKLKEFLSMFFMAILFFPAFNASLFFTGVKPLYSIIKCSTEIFYDWRMLILCFGFM SFSFLNVHVILLTIIKSFLIKKTKVVNFATDITIQLTLIFLLIAIVIAPLIAPFVTGYVN ANYHPCGNNTGIFPGAIYIKNGMKCNNEYISRKEDSAVK >gi|299857015|gb|ADWS01000049.1| GENE 12 10871 - 11785 81 304 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0217 NR:ns ## KEGG: EC55989_0217 # Name: yafU # Def: inner membrane protein YafU # Organism: E.coli_55989 # Pathway: not_defined # 1 304 6 309 309 627 99.0 1e-178 MAGLRSNNNTQNAQWADYVGDILRGAQPINQLVPQHPYLNDVPLIDELRHQNTHHVILLT LDVAKKILSPITSFDYIHFITTHPSGIKDTLAWLVNASKLMTEFDDNGKIIFNLNALKYT KASYFEILGEKYIKITTSSPLLLEKLGKYIFSSRAPQVLELAIGWRGALSESIKGVKFCI WFSVAWRTIEFIMSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVIL VGGAILLTGIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNT PPVI >gi|299857015|gb|ADWS01000049.1| GENE 13 11829 - 12311 344 160 aa, chain - ## HITS:1 COG:ECs0216 KEGG:ns NR:ns ## COG: ECs0216 COG3157 # Protein_GI_number: 15829470 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli O157:H7 # 1 159 1 158 159 182 54.0 2e-46 MANISYLSLSGETQGLISAGCSTLDSVGNKAQPEHKDQIMVYALMHSISRSQNVNHHELI ITKPVDKSSPLLAKALSDNEKMAICEFILYRTSKAGIYQPYYKINLSKARISSIDFVTPH AVLEKELEPQERIAFIYEDISWEHTLAGTNAMSKWQDRVQ >gi|299857015|gb|ADWS01000049.1| GENE 14 12335 - 13687 1358 450 aa, chain - ## HITS:1 COG:Z0249 KEGG:ns NR:ns ## COG: Z0249 COG3515 # Protein_GI_number: 15799898 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 440 31 470 499 816 98.0 0 MNSNVLTQTIVTGSDPRGLPEFSAIREEINKASHPSQPELNWKLVESLALAIFKANGVDL HTATYYTLARTRTQGLAGFCEGAELLAAMVSHDWDKFWPQGGPARTEMLDWFNSRTGNIL RQQISFAESDLPLIYRTERALQLICDKLQQVELKRVPRVENLLYFMQNTRKRLGPQLKSN TENAAQTTVRTLIYAPETQASSTPEAVVPPLPGLPEMKVEVRSLTENPPQASVINQGSTV RGFIAGIACSVAVASALWWWQVYPVQQQLLQVNDTAQGAATVWMASPELENYERRLQQLL DTSPVQPLETGMQMMRVADSRWPESLQQQQASTQWNEALKTRAQSSPQLRGWLQTRQDLH AFADLVMQREKEGLTLSYIKNVIWQAERGLGQETPVESLLTQYHDARAQKQNTDALEKQI NERLEGVLSRWLLLKNNVMPEAATGTTAEK >gi|299857015|gb|ADWS01000049.1| GENE 15 13698 - 17222 3090 1174 aa, chain - ## HITS:1 COG:Z0250 KEGG:ns NR:ns ## COG: Z0250 COG3523 # Protein_GI_number: 15799899 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 31 1174 1 1144 1144 2213 98.0 0 MFRLPTPRLLSGLKSALRPAMPRFKVSAFWLLILAWIFLLVWIWWKGPTWTLYEEQWLKP LANRWLATAAWGIIALMWLTVRVMKRLQQLEKMQKQQREEAVDPLSVELNAQQRYLDRWL LRLQRHLDNRRFLWQLPWYMVIGPAGSGKTTLLREGFPSDIIYAPEGARGAEQRLYLTPH VGKQAVIFDIDGTLCAPADADILHRRLWEHALGWLKEKRARQPLNGIILTLDLPDLLTAD KRRREHLLQALRSRLQDIRQHLHCQLPVYVVLTRLDLLQGFAALFQSLNRQDRDAILGVT FTRRAHENDDWRTELNAFWQTWVDRMNLALPDLMVAQTHTRASLFSFSRQMQGSREPLVS LLEGLLDGENMNVMLRGVYLTSSLQRGQMDDIFTQSAARQYRLGNNPLASWPLVDTAPYF TRSLFPQALLAEPNLATESRAWLIRSRRRLTVFSATGGVAALLLITGWHHYYNGNYQSGI TVLKQAKAFMDVPPPQGEDDFGNLQLPLLNPVRDATLAYGDWGDRSRLADMGLYQGRRIG PYVEQTYLQLLEQRYLPSLFNGLVKELNAAPPESEEKLAVLRVMRMLEDKSGRNNQVVKQ YMAKRWSEKFHGQRDIQAQLMSHLDYALAHTDWHAERQAGDGDAISRWTPYDKPVVSAQK ELSKLPVYQRVYQSLKTRALGVLPADLNLRDQVGPTFDQVFTSADDNKLVVPQFLTRYGL QSYFVKQRDELVELTAMDSWVLNLTRSVKYSDADRAEIQRQLTEQYISDYTATWRAGMDN LNIRNFESIGQLTGALEQVISGDQPLQRALTVLRDNTQPGVFSEKLSAKEREEALAEPDY QLLTRLGHEFAPENSTLAVQKDKESTMQAVYQQLTELHRYLLAIQNAPVPGKSALKAVQL RLDQNSSDPIFATRQMAKTLPAPLNRWVGRLADQAWHVVMVEAVHYMEVDWRDSVVKPFN EQLANNYPFNPRSAQDASLDAFERFFKPDGILDTFYQQNLKLFIDNDLSLEDGDNNVIIR EDIIAQLETAQKIRDIFFSKQNGLGTSFAVETVSLSGNKRRSVLNLDGQLVDYSQGRNYT AHLVWPNNMREGNESKLTLIGTSGNAPRSISFSGPWAQFRLFGAGQLTGVQDGNFTVRFS VDGGAMTYRVHTDTEDNPFSGGLFSQFGLSDTLY >gi|299857015|gb|ADWS01000049.1| GENE 16 17241 - 18653 1157 470 aa, chain - ## HITS:1 COG:ECs0220 KEGG:ns NR:ns ## COG: ECs0220 COG3515 # Protein_GI_number: 15829474 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 207 470 1 264 264 456 92.0 1e-128 MAMDLRDPNVWISHLLENLPEEKLASALKDDNPNWEYIDGEIVKLGSLAHSQLDIPELQR RGLVILASESKDFRLLAHLLRTLQHAGDPHLALRLLALYVEHYWAVAAPQNMAHKKRFAS QVIKRFETGIEVFSQNAATAQRDALSGELAKLAQCWQSHNAPELAQATDDLFALYQRAFN RAAPAPVPTPAASGSSPQTTATSESGVTQPSAPAPQIVIDSHDDKAWRDTLLKVAAILCE RQPDSPQGYRLRRHALWQNITSTPQAESDGRTPLAAVSADMVADYHAQLGSADMALWQQV EKSVLLAPYWLDGHCLSAQTALRLGYKQVADAIRDEVIRFLERLPQLTGLLFNDHTPFIS EQTKQWLAASPDAKVAPVAQIGEESKAARACFAEQGLEAALRYLDMLPEGDPRDQFHRQY LAAQLTEEAGLVQLAQQQYRMLFRMGLQMMVADWEPSLLEQLEQKFTAEQ >gi|299857015|gb|ADWS01000049.1| GENE 17 18658 - 19305 522 215 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0217 NR:ns ## KEGG: ECO103_0217 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 215 33 247 247 400 100.0 1e-110 MAGVAVAVATTTPPDATATLQAMQSCRRESAALERLDCYDRLLAPLSPSGFDGALVKAGF VGEAWTRATEQEKHRQGNTTELLVTQVPGERPTVVITTPAIGHVPPRPVLMFSCVDNITR MQVALMHPLDVHDIAVTLNADNRALRSHWFVRENGTLLESSRGLSGIDEIKQLFGAKTLT VDTGADNAAGKLTFNIDGLARAIAPLRDACHWAGE >gi|299857015|gb|ADWS01000049.1| GENE 18 19398 - 22259 518 953 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 521 913 414 789 815 204 32 7e-52 MIQIDLPTLVKRLNLFSRQALEMAASECMSQQAAEITVSHVLIQMLTMPRSDLRVITRQG DIGMEELRQALTVENYTTARSADSYPAFSPMLVEWLKEGWLLASAEMQHSELRGGVLLLA LLHSPLRYIPPAAARLLTGINRDRLQQDFVQWTQESAESVVPDADGKGAGTMTDASDTLL ARYAKNMTADARNGRLDPVLCRDHEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLAL RIVAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVISSPVPVILFIDEAH TLIGAGNQQGGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEP NAAEATIILRGLSAVYEQSHGVLIDDDALQAAATLSERYLSGRQLPDKAIDVLDTACARV AINLSSPPKQISALTTLSHQQEAEIRQLERELRIGLRTDTSRMTEVLVQYDETLTALDEL EAAWHQQQTLVREIIALRQQLLGVAEDDAAPLPDADTVEDTQPESESESESESESESESE SESESESESESESESESESEQDNTGAEPADEAGSEQPEETAETVSPVQRLAHLTAELDAL HNDRLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPKWLGDTIKGQDLAIASL HKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEK HTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEMA DGEGRLIDCKNIVFFLTSNLGYQVIVEHADDPETMQEVLYPVLADFFKPALLARMEVVPY LPLSKETLATIIAGKLARLDNVLRSRFGAEVIIEPEVTDEIMSRVTRAENGARMLESVID GNMLPPLSLLLLQKMAANTAVARIRLSAVDGAFTADVEDAQNDESVTKDETVL >gi|299857015|gb|ADWS01000049.1| GENE 19 22390 - 23028 586 212 aa, chain - ## HITS:1 COG:ECs0224 KEGG:ns NR:ns ## COG: ECs0224 COG3455 # Protein_GI_number: 15829478 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 205 1 205 253 416 96.0 1e-116 MDEGSLSLPPFTGYDEKSQRNYHLALRGNSLNPMIDAATPLLGMVMRLSTMNSQTMPEHL FAQVVTDVQAVEQLLQEQGYEPGVIISFRYILCTFIDEAALGNGWSNKNEWIKQSLLVHF HNEAWGGEKVFILLERLIREPKRYQDLLEFLWICFSLGFRGRYKVAAQDQGEFEQIYRRL YHVLHKLRGDAPFPLLHQDKKPRAGVISSSVA >gi|299857015|gb|ADWS01000049.1| GENE 20 23033 - 24364 1063 443 aa, chain - ## HITS:1 COG:ECs0225 KEGG:ns NR:ns ## COG: ECs0225 COG3522 # Protein_GI_number: 15829479 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 443 1 443 443 885 99.0 0 MATTRNKVMWQEGMLMRPHHFQQQQRYNDYLDNQRFRAMNDLSWGFTELTLNNELLAQGK IMIDSASGTLPDGTVFSIPDQDALPDPLHPQNFPDERSRNIYLALPVASDVRNEISDGRR IGRYRLNYADVRDLHSEEGDARTLTLGQLTPRIMSGAEDMSAYITLPLCRISDRHADGSL TLDDDFIPSCQNIQVSKKLRVYLKEVQGAIGGRASDLANRIGSPAQSGIADVAEFMMLQL LNRNQTRFTHRARRSQLHPEDFYLDLAGLLGELMTFTEPSRLPCPLDVYDHHDLTKTFKT LLPEVKRALHTVLSPRAVNLPLHLRDGIWQADIHDTELLQSATFVLAVAANVPVDQIQRQ FIQQSKISSPEKIRNMVSVQIPGIPLRALMVAPRQLPYHSGFSYFELDKSGQAWTEMAAA GAVALHVSGSFPDLNMQLWAIRG >gi|299857015|gb|ADWS01000049.1| GENE 21 24367 - 24891 516 174 aa, chain - ## HITS:1 COG:ECs0226 KEGG:ns NR:ns ## COG: ECs0226 COG3521 # Protein_GI_number: 15829480 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 174 1 174 174 328 98.0 4e-90 MNRKAFLACVLMCVILTGCETAKKISEVIKNPDIQVGSLKEQPSEITVTLLTEPDTNTNA EGESAAVDVQLVYLTDDSKLLAADYDQIASTPLPDVLGKNYIDHQDFNLLPDTIKTLPPV KLDEKTQFIGVVAYFSDDQATEWKQIETVEGTGHHYRLLVHVRQSSIEMKKEDE >gi|299857015|gb|ADWS01000049.1| GENE 22 24888 - 26168 874 426 aa, chain - ## HITS:1 COG:Z0258 KEGG:ns NR:ns ## COG: Z0258 COG3456 # Protein_GI_number: 15799907 # Func_class: T Signal transduction mechanisms # Function: Uncharacterized conserved protein, contains FHA domain # Organism: Escherichia coli O157:H7 EDL933 # 1 426 8 433 433 816 98.0 0 MPEEKLQTLSLQVINGSELESGRAARCLFTQQGNVGHGPECHWSVQDRQQSIPAQAFTVI LHDGTFCLRPQTAQLWLNQAKVTATSDLIQLRQGDEIQIGRLMVRVHLNRGDIPHYDEEM ATPETIVTNRDMLTDTLLSTEGTPHYPGMTHRHQLADTVVNGFSADPLQALQSESLITTG DPLSGIAAVRPSAPLSDPASNGGINTPFMDLPPIYASPGDRNDDVSAAEMAQRHLAVTPL LRGLGGSLTMSNSDDADDFLEEAGRTLQAAIKGLLDLQQQRNSLSDKHLRPLEDNPLRLN MDYATALDVMFAEGKSPVHLAAPAAVSESLRNVRHHEEANRAAIVESLRVLLDAFSPQNL LRRFVQYRRSHELRQPLDDAGAWQMYSHYYEELASDRQQGFEMLFNEVYAQVYDRVLREK QREPEA >gi|299857015|gb|ADWS01000049.1| GENE 23 26193 - 27275 748 360 aa, chain - ## HITS:1 COG:ECs0228 KEGG:ns NR:ns ## COG: ECs0228 COG3520 # Protein_GI_number: 15829482 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 360 1 360 360 725 98.0 0 MDGKNRAASSYLSPGNPSADKEQNEPLAQVFHNACSYNFFAMAELLHRLAQGEKGTPELS LRDDPTQETLRFSADASLAFPLSDISALKRDTSGAFRMTTTFMGLQGSQSPLPGYYLDHL AWKAVHEQSPVGDFLDMFSHRLTQFVWHIWRKYRYHISFRNGGVDAFSQRMYSLVGLGHR QLRDKLAINHSKMLAYSGILANPGRSPEIICGLVSHCFDLSEVTLQNWQRRKVDIEPDQQ NSLGSYSLKNGEKLAGRSVLGNFVLGTRVPDLSGKFQLSITSLTRKQFLSFLPSGENFLP LTMFVSFILRDQLAWDLHLGLAPEQVGAMRLGDNKSALLGWTSFLGTPEERPSVTIRVRS >gi|299857015|gb|ADWS01000049.1| GENE 24 27239 - 27457 116 72 aa, chain - ## HITS:1 COG:ECs0229 KEGG:ns NR:ns ## COG: ECs0229 COG3519 # Protein_GI_number: 15829483 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 21 72 565 616 616 113 98.0 9e-26 MCCGENITFHQVAKFSVPLHVCEGEMYLLGTVLSHFLSLYASVNSFHMLTVVNTESQETW KWTERTGQHPLI >gi|299857015|gb|ADWS01000049.1| GENE 25 27471 - 27618 79 49 aa, chain + ## HITS:1 COG:ECs3871 KEGG:ns NR:ns ## COG: ECs3871 COG2963 # Protein_GI_number: 15833125 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 49 1 49 114 92 100.0 1e-19 MNKKTKRTFTPEFRLECAQLIVDKGYSYRQASEAMNVGSTTLESWVRQL Prediction of potential genes in microbial genomes Time: Sun May 15 22:53:36 2011 Seq name: gi|299857014|gb|ADWS01000050.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont49.1, whole genome shotgun sequence Length of sequence - 26076 bp Number of predicted genes - 27, with homology - 27 Number of transcription units - 13, operones - 5 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 302 244 ## COG5525 Bacteriophage tail assembly protein + Term 314 - 358 9.4 - Term 302 - 346 5.6 2 2 Tu 1 . - CDS 376 - 768 95 ## COG2199 FOG: GGDEF domain - Prom 887 - 946 6.9 3 3 Op 1 4/0.500 - CDS 2453 - 2929 482 ## COG1881 Phospholipid-binding protein 4 3 Op 2 . - CDS 2988 - 4295 1158 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Prom 4401 - 4460 3.2 + Prom 4261 - 4320 3.2 5 4 Op 1 12/0.000 + CDS 4364 - 5404 1108 ## COG0502 Biotin synthase and related enzymes 6 4 Op 2 6/0.500 + CDS 5401 - 6555 913 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 7 4 Op 3 9/0.000 + CDS 6542 - 7297 493 ## COG0500 SAM-dependent methyltransferases 8 4 Op 4 3/0.833 + CDS 7290 - 7967 447 ## COG0132 Dethiobiotin synthetase + Term 8124 - 8166 1.1 + Prom 8436 - 8495 6.9 9 5 Tu 1 . + CDS 8546 - 10567 2259 ## COG0556 Helicase subunit of the DNA excision repair complex - Term 10593 - 10629 2.4 10 6 Tu 1 . - CDS 10759 - 11667 826 ## COG0391 Uncharacterized conserved protein - Prom 11820 - 11879 3.7 + Prom 11855 - 11914 4.2 11 7 Op 1 6/0.500 + CDS 12064 - 13053 736 ## COG2896 Molybdenum cofactor biosynthesis enzyme 12 7 Op 2 11/0.000 + CDS 13075 - 13587 638 ## COG0521 Molybdopterin biosynthesis enzymes 13 7 Op 3 11/0.000 + CDS 13590 - 14075 638 ## COG0315 Molybdenum cofactor biosynthesis enzyme 14 7 Op 4 21/0.000 + CDS 14068 - 14313 282 ## COG1977 Molybdopterin converting factor, small subunit 15 7 Op 5 5/0.500 + CDS 14315 - 14767 636 ## COG0314 Molybdopterin converting factor, large subunit + Prom 14819 - 14878 1.9 16 8 Tu 1 5/0.500 + CDS 14904 - 15608 773 ## COG0670 Integral membrane protein, interacts with FtsH + Term 15628 - 15658 1.0 + Prom 15642 - 15701 4.0 17 9 Tu 1 . + CDS 15813 - 16526 220 ## COG0670 Integral membrane protein, interacts with FtsH 18 10 Op 1 5/0.500 - CDS 16562 - 17518 992 ## COG0392 Predicted integral membrane protein 19 10 Op 2 8/0.000 - CDS 17518 - 18759 1245 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 20 10 Op 3 . - CDS 18756 - 19517 527 ## COG3568 Metal-dependent hydrolase - Prom 19624 - 19683 1.5 + Prom 19500 - 19559 3.0 21 11 Tu 1 . + CDS 19650 - 20060 467 ## G2583_1019 inner membrane protein YbhQ 22 12 Op 1 22/0.000 - CDS 20022 - 21128 1219 ## COG0842 ABC-type multidrug transport system, permease component 23 12 Op 2 45/0.000 - CDS 21139 - 22272 1366 ## COG0842 ABC-type multidrug transport system, permease component 24 12 Op 3 10/0.000 - CDS 22265 - 24001 343 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 25 12 Op 4 15/0.000 - CDS 23994 - 24989 1261 ## COG0845 Membrane-fusion protein 26 12 Op 5 . - CDS 24992 - 25663 684 ## COG1309 Transcriptional regulator - Prom 25692 - 25751 3.3 + Prom 25714 - 25773 2.9 27 13 Tu 1 . + CDS 25892 - 26075 138 ## COG0513 Superfamily II DNA and RNA helicases Predicted protein(s) >gi|299857014|gb|ADWS01000050.1| GENE 1 3 - 302 244 99 aa, chain + ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 1 99 149 247 247 176 92.0 1e-44 NVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEI ATEEEISLLEAWKKYRVLLNRVDTSTAPDIEWPTGPIIE >gi|299857014|gb|ADWS01000050.1| GENE 2 376 - 768 95 130 aa, chain - ## HITS:1 COG:ycdT_2 KEGG:ns NR:ns ## COG: ycdT_2 COG2199 # Protein_GI_number: 16128989 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 1 126 66 191 202 128 48.0 3e-30 MLDIDNFKSINDKWGHHMGDQVIVMVTRIIKKSIRKEDILGRLGGEEFGIIIKGNTQKLL LSIAERIRKNIEEQCSEKLLSHGPEKITVSIGCFTSKENNLSPSEMLVNADKALYQAKRT GKNKVITHSK >gi|299857014|gb|ADWS01000050.1| GENE 3 2453 - 2929 482 158 aa, chain - ## HITS:1 COG:ybhB KEGG:ns NR:ns ## COG: ybhB COG1881 # Protein_GI_number: 16128741 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Escherichia coli K12 # 1 158 1 158 158 314 100.0 4e-86 MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSG WWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTV HALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS >gi|299857014|gb|ADWS01000050.1| GENE 4 2988 - 4295 1158 435 aa, chain - ## HITS:1 COG:bioA KEGG:ns NR:ns ## COG: bioA COG0161 # Protein_GI_number: 16128742 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Escherichia coli K12 # 7 435 1 429 429 865 99.0 0 MVYKSIMTTDDLAFDQRHIWHPYTSMTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWA AIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCCKLVAMTPQPLECVFLADSGSV AVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLF APAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKM CDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAE TISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVAAIEVQLREQLAPARDAE MVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLT AAVNRAVQDETFFCQ >gi|299857014|gb|ADWS01000050.1| GENE 5 4364 - 5404 1108 346 aa, chain + ## HITS:1 COG:bioB KEGG:ns NR:ns ## COG: bioB COG0502 # Protein_GI_number: 16128743 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Escherichia coli K12 # 1 346 1 346 346 694 100.0 0 MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYC PQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGV KAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKV RDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDA FDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDK DLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL >gi|299857014|gb|ADWS01000050.1| GENE 6 5401 - 6555 913 384 aa, chain + ## HITS:1 COG:ECs0854 KEGG:ns NR:ns ## COG: ECs0854 COG0156 # Protein_GI_number: 15830108 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Escherichia coli O157:H7 # 1 384 1 384 384 671 97.0 0 MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIR AWQQGAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRALLFISGFAANQAVIAAMM AKEDRIVADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQLVVTEGVFSM DGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGV SGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRRDEGDARREKLVSLIA RFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARL RLTLTAAHEMQDIDRLLEVLHGNG >gi|299857014|gb|ADWS01000050.1| GENE 7 6542 - 7297 493 251 aa, chain + ## HITS:1 COG:bioC KEGG:ns NR:ns ## COG: bioC COG0500 # Protein_GI_number: 16128745 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 251 1 251 251 455 98.0 1e-128 MATVNKQAIAAAFGRAAALYEQHADLQRQSADVLLAMLPQRKYTHVLDAGCGPGWMSRHW RERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLS TALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHY QHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLT YHLFLGVIARE >gi|299857014|gb|ADWS01000050.1| GENE 8 7290 - 7967 447 225 aa, chain + ## HITS:1 COG:bioD KEGG:ns NR:ns ## COG: bioD COG0132 # Protein_GI_number: 16128746 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Escherichia coli K12 # 1 225 1 225 225 428 98.0 1e-120 MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGSEKTPEGLRNSDALALQ HNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGG WFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQAIQHAGLTLAGWVANDVTP PGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL >gi|299857014|gb|ADWS01000050.1| GENE 9 8546 - 10567 2259 673 aa, chain + ## HITS:1 COG:ECs0857 KEGG:ns NR:ns ## COG: ECs0857 COG0556 # Protein_GI_number: 15830111 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Escherichia coli O157:H7 # 1 673 1 673 673 1265 100.0 0 MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD QLHQLRELFIAAS >gi|299857014|gb|ADWS01000050.1| GENE 10 10759 - 11667 826 302 aa, chain - ## HITS:1 COG:ybhK KEGG:ns NR:ns ## COG: ybhK COG0391 # Protein_GI_number: 16128748 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 302 1 302 302 548 100.0 1e-156 MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAW GDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRN LLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAI NEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKL AIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQA LG >gi|299857014|gb|ADWS01000050.1| GENE 11 12064 - 13053 736 329 aa, chain + ## HITS:1 COG:ECs0859 KEGG:ns NR:ns ## COG: ECs0859 COG2896 # Protein_GI_number: 15830113 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 682 100.0 0 MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFA SLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVANWRDAGLTGI NVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNW IQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHP DYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARI SAALREKKQTHFLHQNNTGITQNLSYIGG >gi|299857014|gb|ADWS01000050.1| GENE 12 13075 - 13587 638 170 aa, chain + ## HITS:1 COG:ECs0860 KEGG:ns NR:ns ## COG: ECs0860 COG0521 # Protein_GI_number: 15830114 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Escherichia coli O157:H7 # 1 170 1 170 170 341 99.0 4e-94 MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQ VSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREIEGFGEVFRMLSFEEIGTSTLQ SRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTRPCNFHPHLKK >gi|299857014|gb|ADWS01000050.1| GENE 13 13590 - 14075 638 161 aa, chain + ## HITS:1 COG:ECs0861 KEGG:ns NR:ns ## COG: ECs0861 COG0315 # Protein_GI_number: 15830115 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Escherichia coli O157:H7 # 1 161 1 161 161 296 100.0 9e-81 MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARI AGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAAS VAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEADD >gi|299857014|gb|ADWS01000050.1| GENE 14 14068 - 14313 282 81 aa, chain + ## HITS:1 COG:moaD KEGG:ns NR:ns ## COG: moaD COG1977 # Protein_GI_number: 16128752 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, small subunit # Organism: Escherichia coli K12 # 1 81 1 81 81 149 100.0 1e-36 MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWALALEDGKLLAAVNQTLV SFDHPLTDGDEVAFFPPVTGG >gi|299857014|gb|ADWS01000050.1| GENE 15 14315 - 14767 636 150 aa, chain + ## HITS:1 COG:moaE KEGG:ns NR:ns ## COG: moaE COG0314 # Protein_GI_number: 16128753 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Escherichia coli K12 # 1 150 1 150 150 288 99.0 2e-78 MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVKALTLEHYPGMTE KALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKT RAPFWKREATPEGDRWVEARESDQQAAKRW >gi|299857014|gb|ADWS01000050.1| GENE 16 14904 - 15608 773 234 aa, chain + ## HITS:1 COG:ybhL KEGG:ns NR:ns ## COG: ybhL COG0670 # Protein_GI_number: 16128754 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 234 1 234 234 368 100.0 1e-102 MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAANSAAVMELLFTNRVFLI GLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSSIFIVYTAASIASTFVVTA GMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVIVFVG LTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRIFGNRR >gi|299857014|gb|ADWS01000050.1| GENE 17 15813 - 16526 220 237 aa, chain + ## HITS:1 COG:ybhM KEGG:ns NR:ns ## COG: ybhM COG0670 # Protein_GI_number: 16128755 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 237 1 237 237 402 94.0 1e-112 MESYSQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYLEITATKYDSPTMYVAI GLLLVCMYGLSKDINKINAVIAGVIYLFLLSLVAIVVASLAPVPAIIVVFSTAGAMFLIS MLAGLLFNVDPGSHRFIIMMTLTGLALVIIMNAALMSERPVWVISCLMIVLWSGIISHGR NKLLELAGKCHSEELWSPVRCAVTGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH >gi|299857014|gb|ADWS01000050.1| GENE 18 16562 - 17518 992 318 aa, chain - ## HITS:1 COG:ybhN KEGG:ns NR:ns ## COG: ybhN COG0392 # Protein_GI_number: 16128756 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 318 1 318 318 529 99.0 1e-150 MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVV SYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPG STITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVYLW FCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVL LVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGSIIAALLAYRVLYYFIPLLLALICY LLLESQAKKLRAKNEAAM >gi|299857014|gb|ADWS01000050.1| GENE 19 17518 - 18759 1245 413 aa, chain - ## HITS:1 COG:ECs0867 KEGG:ns NR:ns ## COG: ECs0867 COG1502 # Protein_GI_number: 15830121 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli O157:H7 # 1 413 1 413 413 835 100.0 0 MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFEDDVGKQLHAALLAAAQ RGVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLFGMRTNVFRRMHRKIVVID ARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDILQFELENLPGQSAARRWWRRH HKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQARREVIIANAYFFPGYRFLHAL RKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVKGGVQVFEYRRRPLHGKVALMDDHW ATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRDNLNGIIAADCQQVDETMLPKRTWWNL TKSVLAFHFLRHFPALVGWLPAHTPRLAQVDPPAQPTMETQDRVETENTGVKP >gi|299857014|gb|ADWS01000050.1| GENE 20 18756 - 19517 527 253 aa, chain - ## HITS:1 COG:ECs0868 KEGG:ns NR:ns ## COG: ECs0868 COG3568 # Protein_GI_number: 15830122 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 520 100.0 1e-147 MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLH VENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKR GVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWR QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALPLRTWRH LSDHAPLSAEIHL >gi|299857014|gb|ADWS01000050.1| GENE 21 19650 - 20060 467 136 aa, chain + ## HITS:1 COG:no KEGG:G2583_1019 NR:ns ## KEGG: G2583_1019 # Name: ybhQ # Def: inner membrane protein YbhQ # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 136 1 136 136 215 100.0 4e-55 MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGLCALYCVTVVMMLVFQR HPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLLAIAGLAILAGPAVVSLLA KDKKLHHLTSKHRVRR >gi|299857014|gb|ADWS01000050.1| GENE 22 20022 - 21128 1219 368 aa, chain - ## HITS:1 COG:ECs0870 KEGG:ns NR:ns ## COG: ECs0870 COG0842 # Protein_GI_number: 15830124 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 1 368 1 368 368 686 100.0 0 MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEH SVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLI LDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLI AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAI GIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSG YVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAY AMFRRKVM >gi|299857014|gb|ADWS01000050.1| GENE 23 21139 - 22272 1366 377 aa, chain - ## HITS:1 COG:ECs0871 KEGG:ns NR:ns ## COG: ECs0871 COG0842 # Protein_GI_number: 15830125 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 682 100.0 0 MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILL EQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANAT APIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQ HFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAA FLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIAS AVMFIGLTWLKTKRRLD >gi|299857014|gb|ADWS01000050.1| GENE 24 22265 - 24001 343 578 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 330 549 12 233 318 136 34 1e-31 MNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPD SGNATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFA RLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQM VHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHE GNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPDDIRHAEGMPEININETTPRFEDAF IDLLGGAGTSESPLGAILHTVEGTPGETVIEAKELTKKFGDFAATDHVNFAVKRGEIFGL LGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVE QNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPD ILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEAEYCDRIGLVYRGKLIAS GTPDDLKAQSANDEQPDPTMEQAFIQLIHDWDKEHSNE >gi|299857014|gb|ADWS01000050.1| GENE 25 23994 - 24989 1261 331 aa, chain - ## HITS:1 COG:Z1015 KEGG:ns NR:ns ## COG: Z1015 COG0845 # Protein_GI_number: 15800546 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 EDL933 # 1 331 2 332 332 551 99.0 1e-157 MKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVD EGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQ AAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDI AQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPV WVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLV YRLRIVVTDADDALRQGMPVTVQFGNEAGHE >gi|299857014|gb|ADWS01000050.1| GENE 26 24992 - 25663 684 223 aa, chain - ## HITS:1 COG:ECs0874 KEGG:ns NR:ns ## COG: ECs0874 COG1309 # Protein_GI_number: 15830128 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 223 5 227 227 437 100.0 1e-123 MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYL ACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSK FISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFR LGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL >gi|299857014|gb|ADWS01000050.1| GENE 27 25892 - 26075 138 61 aa, chain + ## HITS:1 COG:ECs0875 KEGG:ns NR:ns ## COG: ECs0875 COG0513 # Protein_GI_number: 15830129 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 61 1 61 455 119 100.0 1e-27 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL Q Prediction of potential genes in microbial genomes Time: Sun May 15 22:53:48 2011 Seq name: gi|299857013|gb|ADWS01000051.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont50.1, whole genome shotgun sequence Length of sequence - 25618 bp Number of predicted genes - 27, with homology - 27 Number of transcription units - 24, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 37 - 201 70 ## SbBS512_E1227 hypothetical protein - Prom 373 - 432 3.8 + Prom 206 - 265 3.4 2 2 Tu 1 . + CDS 426 - 1712 1536 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 1729 - 1761 6.3 - Term 1717 - 1749 6.3 3 3 Tu 1 . - CDS 1774 - 1980 263 ## G2583_5047 hypothetical protein - Prom 2132 - 2191 5.0 + Prom 2072 - 2131 5.4 4 4 Tu 1 . + CDS 2305 - 2862 681 ## COG3054 Predicted transcriptional regulator - Term 2806 - 2843 5.1 5 5 Tu 1 . - CDS 2852 - 3592 729 ## COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase - Prom 3629 - 3688 4.3 + Prom 3673 - 3732 5.1 6 6 Op 1 1/1.000 + CDS 3782 - 4297 611 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 7 6 Op 2 . + CDS 4333 - 5724 1424 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases + Term 5761 - 5805 -0.7 - Term 5744 - 5784 4.2 8 7 Tu 1 . - CDS 5853 - 6233 409 ## COG1733 Predicted transcriptional regulators - Prom 6264 - 6323 4.0 + Prom 6189 - 6248 3.1 9 8 Tu 1 . + CDS 6322 - 7182 859 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 10 9 Tu 1 . + CDS 7290 - 8255 919 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 8281 - 8340 5.3 11 10 Tu 1 . + CDS 8363 - 9025 901 ## COG2846 Regulator of cell morphogenesis and NO signaling - Term 9020 - 9057 8.2 12 11 Tu 1 . - CDS 9070 - 10482 1486 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 10671 - 10730 3.7 13 12 Tu 1 . - CDS 10791 - 11411 935 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 11483 - 11542 4.9 + Prom 11546 - 11605 2.8 14 13 Tu 1 . + CDS 11630 - 12268 542 ## COG3061 Cell envelope opacity-associated protein A + Term 12402 - 12432 1.6 - Term 12147 - 12188 2.1 15 14 Tu 1 . - CDS 12403 - 13668 191 ## PROTEIN SUPPORTED gi|163764777|ref|ZP_02171831.1| ribosomal protein L22 - Term 14102 - 14133 4.1 16 15 Tu 1 . - CDS 14142 - 14810 679 ## EC55989_1562 putative lipoprotein - Prom 14895 - 14954 4.5 - Term 14893 - 14952 9.7 17 16 Op 1 4/0.556 - CDS 15113 - 15706 713 ## COG0500 SAM-dependent methyltransferases 18 16 Op 2 . - CDS 15703 - 16695 892 ## COG1275 Tellurite resistance protein and related permeases - Prom 16896 - 16955 4.5 + Prom 16679 - 16738 6.6 19 17 Tu 1 . + CDS 16819 - 17799 617 ## ECO103_1559 putative enzyme 20 18 Op 1 1/1.000 - CDS 17794 - 18330 919 ## PROTEIN SUPPORTED gi|16129386|ref|NP_415944.1| ribosomal-protein-L7/L12-serine acetyltransferase - Term 18354 - 18382 1.3 21 18 Op 2 . - CDS 18393 - 18617 224 ## COG2841 Uncharacterized protein conserved in bacteria + Prom 18440 - 18499 3.8 22 19 Tu 1 . + CDS 18633 - 18836 90 ## SSON_1717 hypothetical protein 23 20 Tu 1 . - CDS 18757 - 20376 1531 ## COG3131 Periplasmic glucans biosynthesis protein - Prom 20491 - 20550 3.9 24 21 Tu 1 . - CDS 20637 - 21980 1042 ## COG5383 Uncharacterized protein conserved in bacteria - Prom 22118 - 22177 4.4 + Prom 22093 - 22152 4.5 25 22 Tu 1 . + CDS 22197 - 23120 527 ## COG0583 Transcriptional regulator - Term 22959 - 23000 -0.7 26 23 Tu 1 . - CDS 23158 - 24798 1133 ## COG0840 Methyl-accepting chemotaxis protein - Prom 24882 - 24941 5.5 - Term 25181 - 25209 -0.9 27 24 Tu 1 . - CDS 25418 - 25591 122 ## SSON_1723 hypothetical protein Predicted protein(s) >gi|299857013|gb|ADWS01000051.1| GENE 1 37 - 201 70 54 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E1227 NR:ns ## KEGG: SbBS512_E1227 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 10 54 182 226 226 89 95.0 5e-17 MQYCLMRYANQALYYPSSAEKIGQFSLPAVRMPYRALGSNLLRRFMQRTAFLPK >gi|299857013|gb|ADWS01000051.1| GENE 2 426 - 1712 1536 428 aa, chain + ## HITS:1 COG:ECs5196 KEGG:ns NR:ns ## COG: ECs5196 COG1253 # Protein_GI_number: 15834450 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli O157:H7 # 1 428 20 447 447 843 100.0 0 MSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAA FSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINP MRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHE LIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGY VDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALV VGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNY ETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDA KDKEESVA >gi|299857013|gb|ADWS01000051.1| GENE 3 1774 - 1980 263 68 aa, chain - ## HITS:1 COG:no KEGG:G2583_5047 NR:ns ## KEGG: G2583_5047 # Name: ytfK # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 68 14 81 81 119 100.0 4e-26 MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQV MRLQTEMA >gi|299857013|gb|ADWS01000051.1| GENE 4 2305 - 2862 681 185 aa, chain + ## HITS:1 COG:ECs5194 KEGG:ns NR:ns ## COG: ECs5194 COG3054 # Protein_GI_number: 15834448 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 183 1 183 184 351 98.0 4e-97 MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGK VRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESN KKLYPWSQFIVDSNGVARGAWQLDEKSSAVVVLDKDGRVQWAKDGALTQEEVQQVMDLLH KLINK >gi|299857013|gb|ADWS01000051.1| GENE 5 2852 - 3592 729 246 aa, chain - ## HITS:1 COG:cysQ KEGG:ns NR:ns ## COG: cysQ COG1218 # Protein_GI_number: 16132036 # Func_class: P Inorganic ion transport and metabolism # Function: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase # Organism: Escherichia coli K12 # 1 246 1 246 246 476 99.0 1e-134 MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDIP VLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVM NVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGS SLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPG FRVSIY >gi|299857013|gb|ADWS01000051.1| GENE 6 3782 - 4297 611 171 aa, chain + ## HITS:1 COG:cpdB KEGG:ns NR:ns ## COG: cpdB COG0737 # Protein_GI_number: 16132035 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Escherichia coli K12 # 1 170 1 170 647 325 98.0 3e-89 MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLIN DARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFN YGLDYLKNALAGAKFPYVNANVIDAKTKQPMFTPYLIKDTEVVDKDGKNRR >gi|299857013|gb|ADWS01000051.1| GENE 7 4333 - 5724 1424 463 aa, chain + ## HITS:1 COG:cpdB KEGG:ns NR:ns ## COG: cpdB COG0737 # Protein_GI_number: 16132035 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Escherichia coli K12 # 1 463 185 647 647 912 99.0 0 MGWDKANLSGKVTVNDITETVRKYVPEMREKGADLVVVLAHSGLSADPYKVMAENSVYYL SEIPGVDAIMFGHAHAVFPSKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDLQLSN DSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMY SYLALVQDDPTVQVVNNAQKAYVEHYIQSDPDLAKLPVLSAAAPFKVGGRKNDPASYVEV EKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGF RTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVATNNY RAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAGDKKL DIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK >gi|299857013|gb|ADWS01000051.1| GENE 8 5853 - 6233 409 126 aa, chain - ## HITS:1 COG:ytfH KEGG:ns NR:ns ## COG: ytfH COG1733 # Protein_GI_number: 16132034 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 126 31 156 156 243 100.0 8e-65 MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREGTHRFSDLRRKIGGVSE KMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAV RDERAA >gi|299857013|gb|ADWS01000051.1| GENE 9 6322 - 7182 859 286 aa, chain + ## HITS:1 COG:ytfG KEGG:ns NR:ns ## COG: ytfG COG0702 # Protein_GI_number: 16132033 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 286 1 286 286 463 98.0 1e-130 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALT SALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLSLADEHIE TEKMLADSGIVYTLLRNGWYTENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAAR VISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKSVTYQNLSEADFAAALKSVGLPDGL ADMLADSDVGASKGGLFDNSKTLSKLIGRPTTTLAESVSHLFNVNN >gi|299857013|gb|ADWS01000051.1| GENE 10 7290 - 8255 919 321 aa, chain + ## HITS:1 COG:ECs5188 KEGG:ns NR:ns ## COG: ECs5188 COG0697 # Protein_GI_number: 15834442 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 321 4 324 324 553 98.0 1e-157 MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLIALPIAWLGRVRLRQLA RRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLPVVIPVFANLLYSQRDGKL AWGKLAPALICIGIGLASVNIAELNHGLPDFDWARYTSGIVLALVSVVCWAWYALRNARW LRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNIQTPDFSLPFGPRPLVFISLMVAI AVLCSWVGALCWNVASQRLPTVILGPLIVFETLAGLLYTFLLRQQMPPLMTLSGIALLVI GVVIAVRAKPEKPLTESVSES >gi|299857013|gb|ADWS01000051.1| GENE 11 8363 - 9025 901 220 aa, chain + ## HITS:1 COG:ytfE KEGG:ns NR:ns ## COG: ytfE COG2846 # Protein_GI_number: 16132031 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Regulator of cell morphogenesis and NO signaling # Organism: Escherichia coli K12 # 1 220 1 220 220 424 100.0 1e-119 MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVEVIEAELAKLAE QPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLT MLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPP PEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALAGE >gi|299857013|gb|ADWS01000051.1| GENE 12 9070 - 10482 1486 470 aa, chain - ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 470 1 470 470 851 100.0 0 MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVY MIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVV AITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGL VMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKD PEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVIN FVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVV MLYVNPSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCW VCMAFFVFVVVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRAAELRK >gi|299857013|gb|ADWS01000051.1| GENE 13 10791 - 11411 935 206 aa, chain - ## HITS:1 COG:ECs5185 KEGG:ns NR:ns ## COG: ECs5185 COG0545 # Protein_GI_number: 15834439 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli O157:H7 # 1 206 54 259 259 395 100.0 1e-110 MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIADALEGKHPAVPVDVVHR ALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTESGLQFRVINQGEGAIPART DRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIEALTLMPVGSKWELTIPQELA YGERGAGASIPPFSTLVFEVELLEIL >gi|299857013|gb|ADWS01000051.1| GENE 14 11630 - 12268 542 212 aa, chain + ## HITS:1 COG:ytfB KEGG:ns NR:ns ## COG: ytfB COG3061 # Protein_GI_number: 16132028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell envelope opacity-associated protein A # Organism: Escherichia coli K12 # 1 212 13 224 224 363 100.0 1e-100 MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVT REAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQP DSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSNLQNGQMVKIRQN ASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR >gi|299857013|gb|ADWS01000051.1| GENE 15 12403 - 13668 191 421 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764777|ref|ZP_02171831.1| ribosomal protein L22 [Bacillus selenitireducens MLS10] # 176 397 6 218 225 78 27 5e-14 MLPRRISVSLFIDQSIIWPVKRLQAFKFQLRPGGQQEREMRRFAGACRFVFNRALALQNE NHEAGNKYIPYGKMASWLVEWKNATETQWLKDSPSQPLQQSLKGLERAYKNFFQKRAAFP RFKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNSRQVTGVVKNVTVSQSCGKWYI SIQTESEVSTPVHPSASMVGLDAGVAKLATLSDGTVFEPVNSFQKNQKTLARLQRQLSRK VKFSNNWQKQKRKIQRLHSRIANIRRDYLHKVTTTVSKNHAMIVIEDLKVSNMSKSAAGT VSQPGRNVRAKSGLNRSILDQGWYEMRRQLEYKQLWRGGQVLAVPPAYTSQRCACCGHTA KENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLACGEMVQSGRSLKQEPTEMIQAT A >gi|299857013|gb|ADWS01000051.1| GENE 16 14142 - 14810 679 222 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1562 NR:ns ## KEGG: EC55989_1562 # Name: ydcL # Def: putative lipoprotein # Organism: E.coli_55989 # Pathway: not_defined # 1 222 1 222 222 434 100.0 1e-120 MRTTSFAKVAALCGLLALSGCASKITQPDKYSGFLNNYSDLKETTSATGKPVLRWVDPSF DQSKYDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMKEAIAQRKPLVTTAGPRSL IFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRLYFEGELIDAATNKPVI KVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK >gi|299857013|gb|ADWS01000051.1| GENE 17 15113 - 15706 713 197 aa, chain - ## HITS:1 COG:tehB KEGG:ns NR:ns ## COG: tehB COG0500 # Protein_GI_number: 16129389 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 197 1 197 197 400 99.0 1e-112 MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDK NAMSIANVERIKSIENLDNLHTRVVDLNNLTFDGQYDFILSTVVLMFLEAKTIPGLIANM QRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERVKYNEDVGELHRTDA NGNRIKLRFATMLARKK >gi|299857013|gb|ADWS01000051.1| GENE 18 15703 - 16695 892 330 aa, chain - ## HITS:1 COG:tehA KEGG:ns NR:ns ## COG: tehA COG1275 # Protein_GI_number: 16129388 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Escherichia coli K12 # 1 330 1 330 330 578 99.0 1e-165 MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGLVILAMIIWGLLTSAFI TRLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFRPLAVCLFSFGVVVQLAYA AWQTAGLWRGSHPEEATTPGLYLPTVANNFISAMACGALGYTDAGLVFLGAGVFSWLSLE PVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSVNGGEGDTLAKMLFGYGLLQLLF MLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGSGSDNGFFHTLAVPLFIFTNFIIAI LLIRTFALLMQGKLLVRTERAVLMKAEDKE >gi|299857013|gb|ADWS01000051.1| GENE 19 16819 - 17799 617 326 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1559 NR:ns ## KEGG: ECO103_1559 # Name: ydcK # Def: putative enzyme # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 326 1 326 326 639 99.0 0 MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCW IYDQNAIAFGGTVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLV YGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVIRYA FIEHRAEVFDFASIEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDG DTVHVRGPKVINGEERITRTPLAGLL >gi|299857013|gb|ADWS01000051.1| GENE 20 17794 - 18330 919 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16129386|ref|NP_415944.1| ribosomal-protein-L7/L12-serine acetyltransferase [Escherichia coli str. K-12 substr. MG1655] # 1 178 1 178 179 358 98 2e-98 MTETIKVSESLELHAVAENHVTPLYQLICKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVM LHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTVEIGYWLDESHQGQGIISQALQALIHH YAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAEFLNDAYDDVNLYARIIDS >gi|299857013|gb|ADWS01000051.1| GENE 21 18393 - 18617 224 74 aa, chain - ## HITS:1 COG:ydcH KEGG:ns NR:ns ## COG: ydcH COG2841 # Protein_GI_number: 16129385 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 20 74 1 55 55 82 100.0 2e-16 MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKD EMLKILQQESVKEV >gi|299857013|gb|ADWS01000051.1| GENE 22 18633 - 18836 90 67 aa, chain + ## HITS:1 COG:no KEGG:SSON_1717 NR:ns ## KEGG: SSON_1717 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 67 1 67 67 124 100.0 1e-27 MADKVYLKYTPSDYSFNLGKNASGIVFNQTAPPEEGAEEKTINSSRGRQHTDVYPALAGN TDTAMFH >gi|299857013|gb|ADWS01000051.1| GENE 23 18757 - 20376 1531 539 aa, chain - ## HITS:1 COG:ECs2029 KEGG:ns NR:ns ## COG: ECs2029 COG3131 # Protein_GI_number: 15831283 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Escherichia coli O157:H7 # 1 539 13 551 551 1131 100.0 0 MAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDT LATMTPQAYNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIH FRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTYQY GLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASITGAYKFTIHCEK SQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGE WICRPLNNPQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGK GTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRT GMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIE PIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS >gi|299857013|gb|ADWS01000051.1| GENE 24 20637 - 21980 1042 447 aa, chain - ## HITS:1 COG:ECs2028 KEGG:ns NR:ns ## COG: ECs2028 COG5383 # Protein_GI_number: 15831282 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 869 99.0 0 MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADEL ARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLA RNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEF VQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP ECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTP KGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHR QAIHPGDDPQPLIERGWVAAQPITYEDFLPVSAAGIFQSNLGNETQARNHGNASREAFEQ ALGCPVLDEFQLYQEAEERSKRRCGLL >gi|299857013|gb|ADWS01000051.1| GENE 25 22197 - 23120 527 307 aa, chain + ## HITS:1 COG:ydcI KEGG:ns NR:ns ## COG: ydcI COG0583 # Protein_GI_number: 16129381 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 307 48 354 354 595 99.0 1e-170 MEKNSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGARLFER GRQGAQLTLPGEQFLTHAVRVLDAINTAGQSLHRKEDLNNDVVRVGALPTAALGILPSVI GQFHQQQKETTLQVATMSNPMILAGLKTGEIDIGIGRMSDPELMTGLNYELLFLESLKLV VRPNHPLLQENVTLSRVLEWPVVVSPEGTAPRQHSDALVQSQGCKIPSGCIETLSASLSR QLTVEYDYVWFVPSGAVKDDLRHATLVALPVPGHGAGEPIGILTRVDATFSSGCQLMINA IRKSMPF >gi|299857013|gb|ADWS01000051.1| GENE 26 23158 - 24798 1133 546 aa, chain - ## HITS:1 COG:trg KEGG:ns NR:ns ## COG: trg COG0840 # Protein_GI_number: 16129380 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 1 546 1 546 546 892 99.0 0 MNTTPSHRLGFLHHIRLVPLFACILGGILVLFALSSALAGYFLWQADRDQRDVTAEIEIR TGLANSSDFLRSARINMIQAGAASRIAEMEAMKRNIAQAESEIKQSQQGYRAYQNRPVKT PADEALDTELNQRFQAYITGMQPMLKYAKNGMFEAIINHESEQIRPLDNAYTDILNKAVK IRSTRANQLAELAHQRTRLGGMFMIGAFVLALVMTLITFMVLRRIVIRPLQHAAQRIEKI ASGDLTMKDEPAGRNEIGRLNRHLQQMQHSLGMTVGTVRQGAEEIYRGTSEISAGNADLS SRTEEQAAAIEQTAASMEQLTATVKQNADNAHHASKLAQEASIKASDGGQTVSGVVKTMG AISTSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSAQ AAKEIEGLISESVRLIDLGSDEVATAGKTMSTIVDAVASVTHIMQEIAAASDEQSRGITQ VSQAISEMDKVTQQNASLVEEASAAAVSLEEQAARLTEAVDVFRLNKHSVSAEPRGAGEP VSFATV >gi|299857013|gb|ADWS01000051.1| GENE 27 25418 - 25591 122 57 aa, chain - ## HITS:1 COG:no KEGG:SSON_1723 NR:ns ## KEGG: SSON_1723 # Name: ydcA # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 57 1 57 57 92 100.0 4e-18 MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCNDGSISASKKTCTN Prediction of potential genes in microbial genomes Time: Sun May 15 22:54:10 2011 Seq name: gi|299857012|gb|ADWS01000052.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont51.1, whole genome shotgun sequence Length of sequence - 22304 bp Number of predicted genes - 24, with homology - 23 Number of transcription units - 7, operones - 2 average op.length - 9.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 283 201 ## APECO1_390 hypothetical protein - Term 172 - 206 3.2 2 2 Tu 1 . - CDS 249 - 521 314 ## c1435 hypothetical protein - Prom 576 - 635 1.8 + Prom 488 - 547 1.6 3 3 Tu 1 . + CDS 627 - 1169 292 ## COG3772 Phage-related lysozyme (muraminidase) 4 4 Tu 1 . + CDS 1292 - 1702 180 ## Ent638_0796 hypothetical protein + Term 1779 - 1831 -0.8 5 5 Tu 1 . - CDS 1871 - 2563 280 ## - Prom 2599 - 2658 7.2 + Prom 2963 - 3022 6.7 6 6 Op 1 . + CDS 3135 - 3629 534 ## ECUMN_1833 conserved hypothetical protein from putative prophage 7 6 Op 2 . + CDS 3629 - 5731 1328 ## COG5525 Bacteriophage tail assembly protein 8 6 Op 3 . + CDS 5728 - 5940 171 ## ECUMN_1831 conserved hypothetical protein from putative prophage 9 6 Op 4 4/0.000 + CDS 5940 - 7448 1294 ## COG5511 Bacteriophage capsid protein 10 6 Op 5 4/0.000 + CDS 7462 - 9420 1818 ## COG0740 Protease subunit of ATP-dependent Clp proteases 11 6 Op 6 . + CDS 9540 - 9830 410 ## COG5471 Uncharacterized conserved protein 12 6 Op 7 . + CDS 9823 - 10098 174 ## ECUMN_1827 conserved hypothetical protein from putative prophage 13 6 Op 8 . + CDS 10110 - 10688 521 ## ECUMN_1826 minor tail protein Z (GPZ) of prophage 14 6 Op 9 . + CDS 10673 - 11086 314 ## ECUMN_1825 minor tail protein U 15 6 Op 10 . + CDS 11098 - 11841 727 ## COG5492 Bacterial surface proteins containing Ig-like domains + Term 11862 - 11891 3.5 16 7 Op 1 . + CDS 11902 - 12288 424 ## EFER_4456 putative minor tail component of putative prophage 17 7 Op 2 . + CDS 12309 - 12626 178 ## ECUMN_1822 putative minor tail protein T of putative prophage 18 7 Op 3 6/0.000 + CDS 12598 - 15663 2710 ## COG5281 Phage-related minor tail protein 19 7 Op 4 5/0.000 + CDS 15663 - 15992 229 ## COG4718 Phage-related protein 20 7 Op 5 6/0.000 + CDS 16002 - 16700 570 ## COG4672 Phage-related protein + Term 16734 - 16783 1.0 21 7 Op 6 6/0.000 + CDS 16850 - 17449 291 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 22 7 Op 7 5/0.000 + CDS 17347 - 17994 597 ## COG4723 Phage-related protein, tail component + Term 18011 - 18047 4.4 23 7 Op 8 2/0.000 + CDS 18055 - 21534 2191 ## COG4733 Phage-related protein, tail component + Term 21555 - 21585 3.0 24 7 Op 9 . + CDS 21603 - 22202 562 ## COG3637 Opacity protein and related surface antigens + Term 22230 - 22261 3.1 Predicted protein(s) >gi|299857012|gb|ADWS01000052.1| GENE 1 2 - 283 201 93 aa, chain + ## HITS:1 COG:no KEGG:APECO1_390 NR:ns ## KEGG: APECO1_390 # Name: ydfR # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 93 22 114 114 182 96.0 3e-45 TLALRDKERFDGEIFDLDISLDRVEGAALEFYEAAARRSIRQVFLDVAAGLCEGDELSPE KRPIILEAQNVWITYKGKLPGRITGSLKTPPKW >gi|299857012|gb|ADWS01000052.1| GENE 2 249 - 521 314 90 aa, chain - ## HITS:1 COG:no KEGG:c1435 NR:ns ## KEGG: c1435 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 90 3 92 92 144 98.0 1e-33 MDNSTISLQELLDCISKLRDDVNALTVAFSYLAFSIPKEQMQPTLASLQLESLNPKWSQQ QQNSFKWLAVLLEEKYAGEITISAESSENQ >gi|299857012|gb|ADWS01000052.1| GENE 3 627 - 1169 292 180 aa, chain + ## HITS:1 COG:ydfQ KEGG:ns NR:ns ## COG: ydfQ COG3772 # Protein_GI_number: 16129513 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Escherichia coli K12 # 1 180 1 177 177 324 88.0 6e-89 MNVKIRYGLSAAVLALIAVRAPAPDILDQFLNEKEGNHTTAYRDGSGIWTICRGATVVDG KPVFPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFP STFYKRLNADDRKGACEAIRWWIKDGGRDCRLTKGQKNGCYGQVERRDQESALACWGLEQ >gi|299857012|gb|ADWS01000052.1| GENE 4 1292 - 1702 180 136 aa, chain + ## HITS:1 COG:no KEGG:Ent638_0796 NR:ns ## KEGG: Ent638_0796 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 3 128 55 180 181 179 69.0 3e-44 MLGQVIATQAFNFNRFNQVAEHANSLNSLIDTSTEKTVIEYREILRREKTCDLPVPADIA GGLLEYTYRLRASAMHTDTGRPNEAYDRTATTSSMTYCQAVLWIKPLLALIEKGNNNFSS IREIDELRYRPSEHGQ >gi|299857012|gb|ADWS01000052.1| GENE 5 1871 - 2563 280 230 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSREGSLDLLQEVEESLGIMRQTQHIKPVKVKAILENLRSSLEYLANDTYDKYISPRSND ERPKIYFPYGKKEFIDKFFSKTLKINPPSSSPLYKIFTSIQDYHTGESWLEMMCNLTNEV KHRQPIPLREESSVKDLSVSVDGFGLITAGSSAKILFKNNHINGKKLEDFTFENGKLQRS GNGVPLNIVITEEKKIRFHGNDHEVIPFIESCLIKIRIFIIEAYNELDKI >gi|299857012|gb|ADWS01000052.1| GENE 6 3135 - 3629 534 164 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1833 NR:ns ## KEGG: ECUMN_1833 # Name: not_defined # Def: conserved hypothetical protein from putative prophage # Organism: E.coli_UMN026 # Pathway: not_defined # 1 154 1 154 164 273 100.0 1e-72 MDRELKNLTLNISQLAALSGVHRQTAAARLQNLPVAGGHESNLKLYRVVDIVSAFLALPP PVAEGEMDAHERKAWYQSERERLKFEQETAQLIPASDVRREFAIWAKAVVQVLETLPDIL ERDCGLQPAAVSRVQSIIDDLRDQIALRVTEAGADDEEELQQEE >gi|299857012|gb|ADWS01000052.1| GENE 7 3629 - 5731 1328 700 aa, chain + ## HITS:1 COG:ECs0825 KEGG:ns NR:ns ## COG: ECs0825 COG5525 # Protein_GI_number: 15830079 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli O157:H7 # 1 700 1 700 700 1392 99.0 0 MLNQETAKAARTDSGYILRAPRRMRVADAVAQYMRVPMGAGNSVPWDPLVAPYVIEPMNC LASREYDAVIFVGPARTGKTIGLIDGWVIYNVICDPADMLIIQMTEEKAREHSKKRLART FRVSPEVVSRLSPNKNDNNVYDRTFLAGNYLKIGWPSVNIMSSSDYKCVALTDYDRFPED IDGEGDAFSLASKRTTTFMSSGMTLVESSPGRDVKDVKWRRTSPHEAPPTTGILSLYNRG DRRRWYWPCPHCGEYFQPCGDVVAGFRDIADPVLASEAAYIQCPSCSGRIMPEQKRELNG RGVWLRDGESINADGSRYGDPRRSRIASFWMEGPAAAYQTLSQLVYKLLTAEQEYETTGS EETLKTVINTDWGLPYLPRASMEQRKSELLEQRAEPVPSRSVPDGVNFLVATVDVQAGRH RRFVVQVTGYGSRGERWIIDRYNITQSLRGDSDGESQRIDPASYPEDWDVLLTDVFHKSW PLASDPSQQMRLMAMAVDSGGEDGVTDNAYKFWRRCRRDGLGKRIYLFKGDSIRRAKLIT RTFPDNTGRTGRRAQAAGDVPLWLLQTDALKDRVNNALWRDSPGPGYVHFPDWLGSWFYD ELTYEERSSDGKWSKPGRGANEAFDLMVYAEALVILHGYEKIRWPDAPEWASRETWLECV PDSIEPSPSPEPVSTPVKKQKRKKTVTDDVNPWLTSGGWL >gi|299857012|gb|ADWS01000052.1| GENE 8 5728 - 5940 171 70 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1831 NR:ns ## KEGG: ECUMN_1831 # Name: not_defined # Def: conserved hypothetical protein from putative prophage # Organism: E.coli_UMN026 # Pathway: not_defined # 1 70 3 72 72 115 100.0 5e-25 MNQNDIEAMIQRYTEAEMAVLDGKSVTFNGQQMTMENLSEIRQGRQEWERRLAALITRRR GHPGYRLARF >gi|299857012|gb|ADWS01000052.1| GENE 9 5940 - 7448 1294 502 aa, chain + ## HITS:1 COG:ECs2961 KEGG:ns NR:ns ## COG: ECs2961 COG5511 # Protein_GI_number: 15832215 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Escherichia coli O157:H7 # 1 502 1 500 500 775 77.0 0 MAILDDVIGVFSPGWKAARLRSRVVIQAYEAVKTTRTHKARRENRTADQLSQYGAVSLRE QARYLDNNHDLVIGVFDKLEERVVGKNGIIVEPHPVLRNGAIARDLAAEIRTRWSEWSVS PEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSLTPSAGVHFWLEALEPDFIPMTS DESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKEVDAERMLHLKFVRRLHQMRGTS LLSGVLIRLSALKEYEDSELTAARIAAALGMYIRKGDGQSYEPDGNGSKDKERELTIQPG IIYDDLKPGEEIGMVKSDRPNPNLETFRNGQLRAVAAGSRLSFSSTARNYNGTYSAQRQE LVESTDGYLILQDWFIGAVTRPMYRAWLKQAVASGVIRLPRDLDRSSLYTAVYSGPVMPW IDPVKEAEAWKIQIRGGAATESDWVRAGGRNPDDVKRRRKAEIDENRKLDLVFDTDPASD KGGSSAATKRQEPQHTDDQSEE >gi|299857012|gb|ADWS01000052.1| GENE 10 7462 - 9420 1818 652 aa, chain + ## HITS:1 COG:ECs0829_1 KEGG:ns NR:ns ## COG: ECs0829_1 COG0740 # Protein_GI_number: 15830083 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Escherichia coli O157:H7 # 1 171 56 226 226 338 97.0 1e-92 MQAGHQSDADIYIYDEIGFWGVTAKQFISDLNTLGDITHINLHINSPGGDVFEGIAIFNA LKTHGASITVYVDGVAASMASVIAMVGNPVIMPENTFMMIHKPFGFTGGDAEDMRTYADL LDKVEAVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQVTPAVKAMACIQSK RTEEFKKMPESIRNMITPPRNSAPRVQDDEPAASRTPVQAAAPVVDENSIRAQVLAEQKA RVNGINDLFAMFGGRYQTLQAQCLADPECSLDQAREKLLNEMGRESTPSNKNTPAHIYAG NGNFVGDGIRQALMARAGFEKTERDNVYNGMTLREYARMSLTERGIGVSGYNPMQMVGAA FTHSTSDFGNILLDVANKAILQGWEDAPETYEQWTRKGQLSDFKIAHRVGMGGFSALRQV REGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDLNMLTDVPMKLGRAAKSTIADL VYAILTSNPKISTDNVSLFDKAKHANVLESAAMDVASLDKARQLMRVQKEGERHLNIRPA FVLVPTAMESVANQVIRSSSVKGADINAGIINPVKDFATVIAEPRLDDNSQTTFYLAASK GSDTIEVAYLNGVDTPYIDQMEGFSVDGVTTKVRIDAGVAPVDHRGLVKCTA >gi|299857012|gb|ADWS01000052.1| GENE 11 9540 - 9830 410 96 aa, chain + ## HITS:1 COG:ECs0830 KEGG:ns NR:ns ## COG: ECs0830 COG5471 # Protein_GI_number: 15830084 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 96 27 122 122 162 97.0 2e-40 MAIVASAAISSGDLVQVGDVFAVALTDIPQGETGDGMTEGVFILPKLKTDDMKTGKKVYL KSGKVQLTNSGSDPLVGVVWADAGTSAEEVPVKLNV >gi|299857012|gb|ADWS01000052.1| GENE 12 9823 - 10098 174 91 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1827 NR:ns ## KEGG: ECUMN_1827 # Name: not_defined # Def: conserved hypothetical protein from putative prophage # Organism: E.coli_UMN026 # Pathway: not_defined # 1 91 1 91 91 177 98.0 1e-43 MSDPFSRLAARMDAITVRKMGKTASINDADMTVIPGETLAELNALSGPAVSLVVFSSGYR PRRGDRVVYDGQQWTVTRHERFNGKPMIFIE >gi|299857012|gb|ADWS01000052.1| GENE 13 10110 - 10688 521 192 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1826 NR:ns ## KEGG: ECUMN_1826 # Name: not_defined # Def: minor tail protein Z (GPZ) of prophage # Organism: E.coli_UMN026 # Pathway: not_defined # 1 192 1 192 192 337 100.0 2e-91 MKGLENAIRNLNSLDTRMVPQASAWAINRVAQKAVSVATRQVAGNTVAGDNQVKGIPLKL VRQRVRVFKASPSGKMTARIRVNRGNLPAIKLGTARVRLARRGGKLQYRGSVLKVGKYLF RDAFIQQLANGRWHVMRRIDGKNRYPIDVVKVPLSGPLTQAFEDARDRIIAAEMPKQLGY ALKQQLRLWLTR >gi|299857012|gb|ADWS01000052.1| GENE 14 10673 - 11086 314 137 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1825 NR:ns ## KEGG: ECUMN_1825 # Name: not_defined # Def: minor tail protein U # Organism: E.coli_UMN026 # Pathway: not_defined # 1 137 1 137 137 264 100.0 7e-70 MADPMNRHTQIRQAVLARLREQCGDSATFFDGLPAFIDAQELPAVAVWLSDAQYTGKMTD EDDWQAVLHIAVFIRAQAPDSELDMWMESTIFPALNDIPALSGLIDTLIPLGFNYQRDNE MATWAMAEITYQITYTN >gi|299857012|gb|ADWS01000052.1| GENE 15 11098 - 11841 727 247 aa, chain + ## HITS:1 COG:Z0972 KEGG:ns NR:ns ## COG: Z0972 COG5492 # Protein_GI_number: 15800508 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Escherichia coli O157:H7 EDL933 # 1 247 3 249 249 391 97.0 1e-109 MTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKDLQPGEMTADAEDDTYL DDEDADWKTTTQGQKSVGDTSATLAWRPGDSGQKKLVQLFDSGEVCAFRIKYPNGTVDVF RGWLSSLGKTIASKDVMTRTVKISGVGRPYLAEEGTETVSVTGLTVAPASASVKVGATTT LTFTVKPDGASDKAISVHSTDPQTATVTLNGLVATVKGVKQGSVSIVGMTSDGDFVAVAA VAVSAAG >gi|299857012|gb|ADWS01000052.1| GENE 16 11902 - 12288 424 128 aa, chain + ## HITS:1 COG:no KEGG:EFER_4456 NR:ns ## KEGG: EFER_4456 # Name: not_defined # Def: putative minor tail component of putative prophage # Organism: E.fergusonii # Pathway: not_defined # 1 128 15 142 142 235 100.0 3e-61 MFLKQGTFNYEKQSVVLSELSGLQRIEYLAFVQQRTAKFDAEEGELPEAERQIAFLRMGM DINAWLVSRSLWNAEQSQDVETLCASVITTWSYDALGAGAEMVLSLSGMGAIENAGDLEH EVLTPEKS >gi|299857012|gb|ADWS01000052.1| GENE 17 12309 - 12626 178 105 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1822 NR:ns ## KEGG: ECUMN_1822 # Name: not_defined # Def: putative minor tail protein T of putative prophage # Organism: E.coli_UMN026 # Pathway: not_defined # 1 105 5 109 109 197 100.0 1e-49 MRLAREFRRADWRRMLSEMSATELGEWGDYFRMQSFSDVWMDAQFASLKALIVRMVSGSS DAAVADFSLLPEENGIPERTDEELMHLGEGISGGVRYGPDSQPGH >gi|299857012|gb|ADWS01000052.1| GENE 18 12598 - 15663 2710 1021 aa, chain + ## HITS:1 COG:ECs0837 KEGG:ns NR:ns ## COG: ECs0837 COG5281 # Protein_GI_number: 15830091 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Escherichia coli O157:H7 # 1 1021 1 1021 1021 1547 98.0 0 MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAASDAERSSARMQRFMERQTQAARQTTQA ASSAATAASVHAQTVEKSAQAHERMAREVEKTRQRMEALSQKMREEQAQAMALAEAQDKA ATAFYRQIDSVKQASAGLQELQRIQQQIRQARNSGGIGQQDYLALISEVTAKTRVLTQAE EEATRQKVAFIRQLKEQATRQNLSSSELLRAKAAQLGVSSAAEVYIRKMEQAGKATHSLG LKSAAARQEIGVLIGELARGNLGALRGSGITLANRAGWIDTLMSPKGMMLGGVIGGIAAA VYGLGKAWYDGQKEGEEFNRQLSLTGHYAGVTAGQLWTLSRAISGNGITQHAAAGALAQV VGSGAFRGNDIGMVARAAAQMERSVGQSVSDTINQFKRLKDDPVNAAKALDNELHFLTAT QLEQIRVLGDQGRSSDAARIAMSALAEETGRRTADIDNNLNALGSTLQILADWWNRFWDA AMNIGREDSLDEQIAALQEKVSRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKE QAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQAVRDAAIQRENERY EKALASGKKKTRETRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA LQQRISDLDGKKLTADEKSVLARKDELIQALTLLDVKQQELQKQTALNELKKKTIQLTSQ LAEEERAQRQQHDLDIATVGMGDQQQQRYQVQLSLRQKYQQQLEQLRRDSEQKGTYNTDD YRKAEQALTESLNRQLNENRRYWQQLEVVQGNWKNGVLRAFQDFTVDADNTAGTAEQVFS SAFSNMGNGLATFVTTGKLNFKSFTSSVLSDMAKILAQATMMKSIKGIGSILGFDLSSLS LNANGGIYQSADLSRYSGTVVNRPTFFAFAKGAGVMGEAGPEAILPLRRDADGKLGVVAD IGGSGMAMFAPQYNIEINNDGTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGAY R >gi|299857012|gb|ADWS01000052.1| GENE 19 15663 - 15992 229 109 aa, chain + ## HITS:1 COG:ECs0838 KEGG:ns NR:ns ## COG: ECs0838 COG4718 # Protein_GI_number: 15830092 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 214 99.0 2e-56 METFHWKVRPDMNVVSEPKVVTVKLGDGYEQRRVAGLNNQLSTYSVTIRVRKCEHPSLKA FLERHGGVRAFQWTPPYDWKPIRVVCRKWSASVGALWVTITADFEQVVA >gi|299857012|gb|ADWS01000052.1| GENE 20 16002 - 16700 570 232 aa, chain + ## HITS:1 COG:ECs0839 KEGG:ns NR:ns ## COG: ECs0839 COG4672 # Protein_GI_number: 15830093 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Escherichia coli O157:H7 # 1 232 1 232 232 476 98.0 1e-134 MQDIPQETHHETTRLTQSALVVLWEIDLTEVGGERYFFCNEQNEKGEPVTWQGRQYQAYP IQGTGFELNGKGSAARPTLTVSNLHGMVTGMAEDLQSLVGGTVVRRKVYARFLDAVNFVN GNSDADPEQEVISRWRIEQCSELSAVSASFVLSTPTETDGAVFPGRIMLANTCTWTYRGD ECGYHGPAVADEYDQPTSDITKDKCSKCLSGCKFRNNVGNFGGFLSINKLSQ >gi|299857012|gb|ADWS01000052.1| GENE 21 16850 - 17449 291 199 aa, chain + ## HITS:1 COG:ECs1986_2 KEGG:ns NR:ns ## COG: ECs1986_2 COG0791 # Protein_GI_number: 15831240 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli O157:H7 # 56 196 1 141 144 262 86.0 3e-70 MSPEDWLSAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHKFRCVPH LTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNMEATGFYRVPLT EAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSLWRHRAW HASAFTGICNDLVAVSTFV >gi|299857012|gb|ADWS01000052.1| GENE 22 17347 - 17994 597 215 aa, chain + ## HITS:1 COG:ECs0841 KEGG:ns NR:ns ## COG: ECs0841 COG4723 # Protein_GI_number: 15830095 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 372 94.0 1e-103 MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPVFRQKLNEGWY QVRIAGRDAGENELSARLNEPLANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPV GWLGAAAVSGMYAAGASMILGGVAQMLAPKARTPTAASTDNGKQNTYFSSLDNMVAQGNV LPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR >gi|299857012|gb|ADWS01000052.1| GENE 23 18055 - 21534 2191 1159 aa, chain + ## HITS:1 COG:ECs1648 KEGG:ns NR:ns ## COG: ECs1648 COG4733 # Protein_GI_number: 15830902 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Escherichia coli O157:H7 # 1 1159 1 1132 1132 2003 86.0 0 MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVEGPVDGLKSVLLNSTPVLDSEGNTN ISGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITRTITSANIDRLRFTFGVQA LVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTTSQYLASVVVDNLPPRPFNIR MRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALVGVQVDSEQFGSQQVSRNYHLRG RILQVPSNYNPQTRQYSGIWDGTFKPAYSNNMAWCLWDMLTHPRYGMGKRLGAADVDKWA LYVIGQHCDQSVPDGFGGTEPRITCNAYLTTQRKAWDVLSDFCSAMRCMPVWNGQTLTFV QDRPSDKAWTYNRSNVVMPDDGAPFRYSFSALKDRHNAVEVNWIDPNNGWETATELVEDT QAIARYGRNVTKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIE ICDDDYAGISTGGRVLAVNSQTRTLTLDREITLPSSGTTLISLVDGSGNPVSVEVQSVTD GVKVKVSRVPDGVAGYSVWGLKLPTLRQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVD NGAHFDGDQSGTVNGVTPPAVQHLTAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAA DDGSERLVSTARTTETTYRFTQLALGNYRLTVRAVNAWGQQGDPASVSFRIAAPAAPSRI ELTPGYFQITATPHLAVYDPTVQFEFWFSEKRIADIRQVETTARYLGTALYWIAASINIR PGHNYYFYVRSVNTVGKSAFVEAVGQPSDDASGYLDFFKGEIGKTHLAQELWTQIDNGQL APDLAEIRTSITDVSNEITQTVNKKLEDQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMQD GRLYIAGIGAGIENTPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNEVFLKY LTAPTITSGGNPPAFSLTPDGRLTAKNADISGNVNANSGTLNNVTINENCQIKGKLSANQ IEGDIVKTVGKAFPRDSRAPERWPSGTITVRIYDDQPFDRQIVIPAVAFRGAKHERENND IYSSCRLIVKKNGAEIYNRTALDNTLVYTGVIDMPAGRGHMTLEFSVSAWLVNDWYPTAS ISDLLVVVMKKSTAGITIS >gi|299857012|gb|ADWS01000052.1| GENE 24 21603 - 22202 562 199 aa, chain + ## HITS:1 COG:ECs0843 KEGG:ns NR:ns ## COG: ECs0843 COG3637 # Protein_GI_number: 15830097 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Escherichia coli O157:H7 # 1 199 1 199 199 344 91.0 6e-95 MRKVCAAILSAAICLAVSGAPAWASEQQATLSAGYLHARTNASGSDNLNGINVKYRYEFT DTLGLITSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGMA YSRVSTFSGDYLRVTDNKGKKHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDVAYEG SGSGDWRTDGFIVAVGYKF Prediction of potential genes in microbial genomes Time: Sun May 15 22:54:48 2011 Seq name: gi|299857011|gb|ADWS01000053.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont52.1, whole genome shotgun sequence Length of sequence - 20273 bp Number of predicted genes - 18, with homology - 18 Number of transcription units - 13, operones - 3 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 151 - 196 8.1 1 1 Tu 1 . - CDS 241 - 501 322 ## EC55989_0846 hypothetical protein 2 2 Op 1 1/1.000 - CDS 766 - 1032 282 ## COG1734 DnaK suppressor protein 3 2 Op 2 2/1.000 - CDS 1106 - 1783 678 ## COG3128 Uncharacterized iron-regulated protein - Term 1790 - 1815 -0.5 4 2 Op 3 . - CDS 1825 - 4107 1896 ## COG4774 Outer membrane receptor for monomeric catechols - Prom 4223 - 4282 3.7 - Term 4323 - 4356 2.2 5 3 Tu 1 . - CDS 4371 - 4631 277 ## ECIAI1_0844 hypothetical protein - Prom 4733 - 4792 8.7 + Prom 4741 - 4800 5.3 6 4 Tu 1 . + CDS 4907 - 5833 766 ## COG3129 Predicted SAM-dependent methyltransferase 7 5 Tu 1 . - CDS 5830 - 8055 1944 ## COG0668 Small-conductance mechanosensitive channel - Prom 8083 - 8142 5.6 - Term 8119 - 8171 4.6 8 6 Op 1 34/0.000 - CDS 8172 - 8894 594 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 9 6 Op 2 31/0.000 - CDS 8891 - 9550 940 ## COG0765 ABC-type amino acid transport system, permease component 10 6 Op 3 4/0.667 - CDS 9689 - 10435 1025 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 10482 - 10541 4.1 - Term 10760 - 10803 9.5 11 7 Tu 1 . - CDS 10839 - 11342 596 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 11382 - 11441 4.8 - Term 11590 - 11632 10.1 12 8 Tu 1 . - CDS 11641 - 12468 882 ## COG5006 Predicted permease, DMT superfamily - Prom 12499 - 12558 2.0 + Prom 12796 - 12855 4.6 13 9 Tu 1 . + CDS 12881 - 13396 537 ## COG3637 Opacity protein and related surface antigens + Term 13400 - 13462 10.7 - Term 13407 - 13434 -0.9 14 10 Tu 1 . - CDS 13445 - 15028 1532 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 15144 - 15203 2.2 + Prom 15509 - 15568 4.1 15 11 Op 1 4/0.667 + CDS 15614 - 16081 498 ## COG1321 Mn-dependent transcriptional regulator 16 11 Op 2 . + CDS 16078 - 17196 996 ## COG0471 Di- and tricarboxylate transporters + Term 17215 - 17247 3.1 - Term 17198 - 17239 3.0 17 12 Tu 1 . - CDS 17255 - 18169 1104 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 18231 - 18290 4.9 + Prom 18216 - 18275 4.1 18 13 Tu 1 . + CDS 18394 - 19986 1919 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 20047 - 20085 3.0 Predicted protein(s) >gi|299857011|gb|ADWS01000053.1| GENE 1 241 - 501 322 86 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0846 NR:ns ## KEGG: EC55989_0846 # Name: ybiJ # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 86 1 86 86 82 100.0 3e-15 MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAA AAGASGYSITSATNNNKLSGTAVIYK >gi|299857011|gb|ADWS01000053.1| GENE 2 766 - 1032 282 88 aa, chain - ## HITS:1 COG:ybiI KEGG:ns NR:ns ## COG: ybiI COG1734 # Protein_GI_number: 16128771 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Escherichia coli K12 # 1 88 1 88 88 158 100.0 3e-39 MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLC IHCQQEKDLQKPAYTGYNRRGSKDSQLR >gi|299857011|gb|ADWS01000053.1| GENE 3 1106 - 1783 678 225 aa, chain - ## HITS:1 COG:ybiX KEGG:ns NR:ns ## COG: ybiX COG3128 # Protein_GI_number: 16128772 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated protein # Organism: Escherichia coli K12 # 1 225 13 237 237 459 100.0 1e-129 MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQQVDTRSTLYAALQNEV LNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVRSHPQNGWMRTDLSATLFL SDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCVTPVTRGVRVASFMWIQSMIR DDKKRAMLFELDNNIQSLKSRYGESEEILSLLNLYHNLLREWSEI >gi|299857011|gb|ADWS01000053.1| GENE 4 1825 - 4107 1896 760 aa, chain - ## HITS:1 COG:ECs0883 KEGG:ns NR:ns ## COG: ECs0883 COG4774 # Protein_GI_number: 15830137 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for monomeric catechols # Organism: Escherichia coli O157:H7 # 1 760 1 760 760 1392 99.0 0 MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSA DPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYM RGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRND SGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDARRDKVKNERYGVAPSIA FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDS DYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWT WSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVEFTRETQTNYGVNPVTLPAVNI YHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATA CGGSGRGAITCPAGVAKGSPVTTVDTAKSGNLVNWKAGALYHLTENGNVYINYAVSQQPP GGNNFALAQSGSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQN DDGTYSQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPE HAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLD FQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF >gi|299857011|gb|ADWS01000053.1| GENE 5 4371 - 4631 277 86 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0844 NR:ns ## KEGG: ECIAI1_0844 # Name: ybiM # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 86 49 134 134 163 100.0 1e-39 MKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDKLAEKAR EQGAKGYVINSAGGNDQMFGTATIYK >gi|299857011|gb|ADWS01000053.1| GENE 6 4907 - 5833 766 308 aa, chain + ## HITS:1 COG:ybiN KEGG:ns NR:ns ## COG: ybiN COG3129 # Protein_GI_number: 16128775 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Escherichia coli K12 # 1 308 28 335 335 636 99.0 0 MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALL AHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPL IGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRRQKESGAIFNGIIHKNEQYD ATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEES KGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQR RRFVNRQR >gi|299857011|gb|ADWS01000053.1| GENE 7 5830 - 8055 1944 741 aa, chain - ## HITS:1 COG:ECs0886_2 KEGG:ns NR:ns ## COG: ECs0886_2 COG0668 # Protein_GI_number: 15830140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 431 741 1 311 311 580 99.0 1e-165 MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQKKAAYGALADVLDNDT SRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEVSRHYGEALSARFGQLYRN ITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKNRERSNW LQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVL RLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANV IIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAFALVWHWLASAYFIVLFF FSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPELQKRLN GWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVG WTVLASLIENRLASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPL LAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVR QDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVAELMENEEIR GLVIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTY QVLPAPGAAPAEPLPPGEPTL >gi|299857011|gb|ADWS01000053.1| GENE 8 8172 - 8894 594 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 233 47 8e-61 MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV DGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGANKEEAEKLAREL LAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQ DLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNPPSQRLQEFLQHVS >gi|299857011|gb|ADWS01000053.1| GENE 9 8891 - 9550 940 219 aa, chain - ## HITS:1 COG:ECs0888 KEGG:ns NR:ns ## COG: ECs0888 COG0765 # Protein_GI_number: 15830142 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 373 100.0 1e-103 MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIE VIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGF REAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI IAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL >gi|299857011|gb|ADWS01000053.1| GENE 10 9689 - 10435 1025 248 aa, chain - ## HITS:1 COG:ECs0889 KEGG:ns NR:ns ## COG: ECs0889 COG0834 # Protein_GI_number: 15830143 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 462 100.0 1e-130 MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKE LKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANN NDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDT PNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYK KWFGTEPK >gi|299857011|gb|ADWS01000053.1| GENE 11 10839 - 11342 596 167 aa, chain - ## HITS:1 COG:ECs0890 KEGG:ns NR:ns ## COG: ECs0890 COG0783 # Protein_GI_number: 15830144 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 305 100.0 3e-83 MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFI AVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKE LADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE >gi|299857011|gb|ADWS01000053.1| GENE 12 11641 - 12468 882 275 aa, chain - ## HITS:1 COG:ECs0891 KEGG:ns NR:ns ## COG: ECs0891 COG5006 # Protein_GI_number: 15830145 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Escherichia coli O157:H7 # 1 275 21 295 295 451 100.0 1e-126 MASIQGGASLAKSLFPLVGAPGVTALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVS LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQ DVSHVDLTGCALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGE ALWHWSVIPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGET LTPIQLLALGAIIAASMGSTLTVRKESKIKELDIN >gi|299857011|gb|ADWS01000053.1| GENE 13 12881 - 13396 537 171 aa, chain + ## HITS:1 COG:ECs0892 KEGG:ns NR:ns ## COG: ECs0892 COG3637 # Protein_GI_number: 15830146 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Escherichia coli O157:H7 # 1 171 1 171 171 301 100.0 4e-82 MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKMGGFNLKYRYEEDNSPL GVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTEYPT YKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF >gi|299857011|gb|ADWS01000053.1| GENE 14 13445 - 15028 1532 527 aa, chain - ## HITS:1 COG:ybiP KEGG:ns NR:ns ## COG: ybiP COG2194 # Protein_GI_number: 16128783 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 527 1 527 527 1073 100.0 0 MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTAAFTAILLLLWRTLPRV QKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFIF ALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQNLAWGGVFKLKDTGYPVFRFA KDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQTYVVVIGESARRDALGAFGGHWD NTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFS NQGQIGEYDTAIASIAKRADEVYFLKEGNFEADKNTKDEALLDMTAQVLAQEHSQPQLIV LHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDDLLRKLYDQLRNSGSSFSLVYF SDHGLAFKERGKDVQYLAHDDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQW TGIKAKEINIKYPFISEKKAGPIYITNFQLQKVDYNHLGTDIFDPKP >gi|299857011|gb|ADWS01000053.1| GENE 15 15614 - 16081 498 155 aa, chain + ## HITS:1 COG:ybiQ KEGG:ns NR:ns ## COG: ybiQ COG1321 # Protein_GI_number: 16128785 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Escherichia coli K12 # 1 155 1 155 155 268 100.0 2e-72 MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQVDM AARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLG VSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK >gi|299857011|gb|ADWS01000053.1| GENE 16 16078 - 17196 996 372 aa, chain + ## HITS:1 COG:ybiR KEGG:ns NR:ns ## COG: ybiR COG0471 # Protein_GI_number: 16128786 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli K12 # 1 372 1 372 372 617 99.0 1e-176 MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHTIITLSGLMLLTKGVEL SGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVALFIVVPLTITLKRLCEIPV NRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFIAQMAPLAGAMMLTLLLLCWC CFPGKALQYHTGVQTPEWKPRLVWSCLGLYIVFLTALEFKQELWGLVIVAAGFALLARRV VLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVSHLSEPGLWLTAIGLSQVISNVPST ILLLNYVPPSLLLVWAVNVGGFGLLPGSLANLIALRMANDRRIWWRFHLYSIPMLLWAAL VGYVLLVILPAN >gi|299857011|gb|ADWS01000053.1| GENE 17 17255 - 18169 1104 304 aa, chain - ## HITS:1 COG:ECs0896 KEGG:ns NR:ns ## COG: ECs0896 COG1376 # Protein_GI_number: 15830150 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 304 3 306 306 595 100.0 1e-170 MKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEYQM GLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIV LPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGL YALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKATT EPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSGMP VRLN >gi|299857011|gb|ADWS01000053.1| GENE 18 18394 - 19986 1919 530 aa, chain + ## HITS:1 COG:ECs0897 KEGG:ns NR:ns ## COG: ECs0897 COG0488 # Protein_GI_number: 15830151 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 530 1 530 530 1053 100.0 0 MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL DPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLE VKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLD EPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS SRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKST LLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRS ILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMA LELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYLRSKGIE Prediction of potential genes in microbial genomes Time: Sun May 15 22:55:00 2011 Seq name: gi|299857010|gb|ADWS01000054.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont53.1, whole genome shotgun sequence Length of sequence - 19997 bp Number of predicted genes - 24, with homology - 24 Number of transcription units - 8, operones - 5 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 207 147 ## ECO111_1337 biofilm formation regulatory protein BssS - Prom 409 - 468 7.8 - Term 448 - 475 1.5 2 2 Op 1 . - CDS 497 - 742 234 ## UTI89_C1186 DNA damage-inducible protein I 3 2 Op 2 . - CDS 816 - 1736 797 ## COG0418 Dihydroorotase - Prom 1899 - 1958 2.1 - Term 1932 - 1963 3.2 4 3 Tu 1 . - CDS 1968 - 2528 631 ## APECO1_145 hypothetical protein - Term 2610 - 2649 8.0 5 4 Op 1 1/1.000 - CDS 2662 - 3309 643 ## COG2999 Glutaredoxin 2 6 4 Op 2 . - CDS 3373 - 4581 1206 ## COG0477 Permeases of the major facilitator superfamily - Prom 4610 - 4669 2.1 + Prom 4662 - 4721 5.5 7 5 Op 1 5/0.667 + CDS 4817 - 5401 1067 ## PROTEIN SUPPORTED gi|15801183|ref|NP_287200.1| ribosomal-protein-S5-alanine N-acetyltransferase 8 5 Op 2 4/1.000 + CDS 5412 - 6059 718 ## COG3132 Uncharacterized protein conserved in bacteria 9 5 Op 3 5/0.667 + CDS 6061 - 6984 703 ## COG0673 Predicted dehydrogenases and related proteins + Term 7047 - 7075 3.0 10 6 Tu 1 . + CDS 7094 - 8629 1013 ## PROTEIN SUPPORTED gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 + Term 8637 - 8677 2.7 - Term 8621 - 8664 10.2 11 7 Op 1 7/0.333 - CDS 8669 - 9085 425 ## COG3418 Flagellar biosynthesis/type III secretory pathway chaperone 12 7 Op 2 8/0.000 - CDS 9090 - 9383 344 ## COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) 13 7 Op 3 . - CDS 9459 - 10118 333 ## COG1261 Flagellar basal body P-ring biosynthesis protein - Prom 10141 - 10200 3.9 14 8 Op 1 24/0.000 + CDS 10273 - 10689 467 ## COG1815 Flagellar basal body protein 15 8 Op 2 9/0.000 + CDS 10693 - 11097 319 ## COG1558 Flagellar basal body rod protein 16 8 Op 3 16/0.000 + CDS 11109 - 11804 805 ## COG1843 Flagellar hook capping protein 17 8 Op 4 8/0.000 + CDS 11829 - 13034 1263 ## COG1749 Flagellar hook protein FlgE 18 8 Op 5 8/0.000 + CDS 13054 - 13809 650 ## COG4787 Flagellar basal body rod protein + Prom 13829 - 13888 3.2 19 8 Op 6 9/0.000 + CDS 13947 - 14729 981 ## COG4786 Flagellar basal body rod protein + Term 14734 - 14773 2.5 20 8 Op 7 9/0.000 + CDS 14782 - 15480 725 ## COG2063 Flagellar basal body L-ring protein 21 8 Op 8 7/0.333 + CDS 15492 - 16589 961 ## COG1706 Flagellar basal-body P-ring protein 22 8 Op 9 9/0.000 + CDS 16589 - 17530 1006 ## COG3951 Rod binding protein 23 8 Op 10 21/0.000 + CDS 17596 - 19239 1487 ## COG1256 Flagellar hook-associated protein 24 8 Op 11 . + CDS 19251 - 19995 663 ## COG1344 Flagellin and related hook-associated proteins Predicted protein(s) >gi|299857010|gb|ADWS01000054.1| GENE 1 3 - 207 147 68 aa, chain - ## HITS:1 COG:no KEGG:ECO111_1337 NR:ns ## KEGG: ECO111_1337 # Name: bssS # Def: biofilm formation regulatory protein BssS # Organism: E.coli_O111_H- # Pathway: not_defined # 1 68 1 68 84 133 100.0 1e-30 MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGTEVGQTLWLTTDVARQF ISILEAGI >gi|299857010|gb|ADWS01000054.1| GENE 2 497 - 742 234 81 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C1186 NR:ns ## KEGG: UTI89_C1186 # Name: not_defined # Def: DNA damage-inducible protein I # Organism: E.coli_UTI89 # Pathway: not_defined # 1 81 20 100 100 156 100.0 2e-37 MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDK QRISEILQETWESADDWFVSE >gi|299857010|gb|ADWS01000054.1| GENE 3 816 - 1736 797 306 aa, chain - ## HITS:1 COG:pyrC KEGG:ns NR:ns ## COG: pyrC COG0418 # Protein_GI_number: 16129025 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase # Organism: Escherichia coli K12 # 1 306 43 348 348 628 99.0 1e-180 MPNLAPPVTTVEAAVAYRQRILDAVPAGHNFTPLMTCYLTDSLDPNELERGFNEGVFTAA KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVM EPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRPHLYC LPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATV FEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETV RWSVKQ >gi|299857010|gb|ADWS01000054.1| GENE 4 1968 - 2528 631 186 aa, chain - ## HITS:1 COG:no KEGG:APECO1_145 NR:ns ## KEGG: APECO1_145 # Name: yceB # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 186 20 205 205 353 100.0 2e-96 MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTN LTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVD ATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGSQGEAMAKKLAKGIEVKPGEI VIPFTD >gi|299857010|gb|ADWS01000054.1| GENE 5 2662 - 3309 643 215 aa, chain - ## HITS:1 COG:ECs1442 KEGG:ns NR:ns ## COG: ECs1442 COG2999 # Protein_GI_number: 15830696 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin 2 # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 427 100.0 1e-120 MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSRYMP ESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLLPRFAKSAFDEFSTPAARK YFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVKPNAVNGELSEDDIQLFPLLR NLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI >gi|299857010|gb|ADWS01000054.1| GENE 6 3373 - 4581 1206 402 aa, chain - ## HITS:1 COG:yceL KEGG:ns NR:ns ## COG: yceL COG0477 # Protein_GI_number: 16129028 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 402 11 412 412 701 100.0 0 MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWAAVMVGIALGLRQFIQQ GLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLLWFSCLLSGLGGTLFDPPR SALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLCAAF NAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLAGYYMLAVQVMLMLPIMVNDVAG APSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHRLMAGLLIMSLSMMPVGMVSGLQQL FTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLAIGGAIGYIGGGWLFDLG KSAHQPELPWMMLGIIGIFTFLALGWQFSQKRAARRLLERDA >gi|299857010|gb|ADWS01000054.1| GENE 7 4817 - 5401 1067 194 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15801183|ref|NP_287200.1| ribosomal-protein-S5-alanine N-acetyltransferase [Escherichia coli O157:H7 EDL933] # 1 194 1 194 194 415 100 1e-115 MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQ ARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGL MFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDH VLTALTTPDWTPGR >gi|299857010|gb|ADWS01000054.1| GENE 8 5412 - 6059 718 215 aa, chain + ## HITS:1 COG:yceH KEGG:ns NR:ns ## COG: yceH COG3132 # Protein_GI_number: 16129030 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 215 1 215 215 394 99.0 1e-110 MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLD NLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSR AARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRESRYMHLFSGEVKDQPAVTDM SNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD >gi|299857010|gb|ADWS01000054.1| GENE 9 6061 - 6984 703 307 aa, chain + ## HITS:1 COG:mviM KEGG:ns NR:ns ## COG: mviM COG0673 # Protein_GI_number: 16129031 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 307 1 307 307 616 99.0 1e-176 MKKLRIGVVGLGGIAQKAWLPVLAAASDWMLQGAWSPTRAKALLICESWRIPYADSLSSL AASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVG FNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFTLLDDYLHVVDTALWLSGGKA SLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAGSQRETVQAVTDGALIDITDMRE WREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIECVQNQTVPQTAGEQAVLAQRIVDKI WRDAMSE >gi|299857010|gb|ADWS01000054.1| GENE 10 7094 - 8629 1013 511 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 [Haemophilus influenzae 22.1-21] # 3 502 5 516 524 394 40 1e-109 MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAF SQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADT ADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAAP YFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPRINFHDAGAMRVVKQMGPAILGV SVSQISLIINTIFASFLASGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFASGNH DEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALIAYSVG LIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLILTQLMNLAFIGPLKHAGLSLSIGLAACL NASLLYWQLRKQKIFTPQPGWMAFLLRLVVAVLVMSGVLLGMLHIMPEWSLGTMPWRLLR LMAVVLAGIAAYFAALAVLGFKVKEFARRTV >gi|299857010|gb|ADWS01000054.1| GENE 11 8669 - 9085 425 138 aa, chain - ## HITS:1 COG:flgN KEGG:ns NR:ns ## COG: flgN COG3418 # Protein_GI_number: 16129033 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar biosynthesis/type III secretory pathway chaperone # Organism: Escherichia coli K12 # 1 138 1 138 138 208 99.0 3e-54 MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLR KKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIERNQQALEMLKPHQEPTLY GANGQTSTTHRGGKKISI >gi|299857010|gb|ADWS01000054.1| GENE 12 9090 - 9383 344 97 aa, chain - ## HITS:1 COG:flgM KEGG:ns NR:ns ## COG: flgM COG2747 # Protein_GI_number: 16129034 # Func_class: K Transcription; N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Negative regulator of flagellin synthesis (anti-sigma28 factor) # Organism: Escherichia coli K12 # 1 97 1 97 97 123 100.0 8e-29 MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLSDAQAKLMQPGSSDINL ERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN >gi|299857010|gb|ADWS01000054.1| GENE 13 9459 - 10118 333 219 aa, chain - ## HITS:1 COG:flgA KEGG:ns NR:ns ## COG: flgA COG1261 # Protein_GI_number: 16129035 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar basal body P-ring biosynthesis protein # Organism: Escherichia coli K12 # 1 219 1 219 219 375 99.0 1e-104 MLTIKRSVAIIAILFSPLSTASNLTSQLHNFFSAQLAGVSDEVRVSIRTAPNLLPPCEQP LLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRG RLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSAN AEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILINL >gi|299857010|gb|ADWS01000054.1| GENE 14 10273 - 10689 467 138 aa, chain + ## HITS:1 COG:flgB KEGG:ns NR:ns ## COG: flgB COG1815 # Protein_GI_number: 16129036 # Func_class: N Cell motility # Function: Flagellar basal body protein # Organism: Escherichia coli K12 # 1 138 1 138 138 228 100.0 2e-60 MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDAT SVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSL SALSGQIKGMMNVLQSGN >gi|299857010|gb|ADWS01000054.1| GENE 15 10693 - 11097 319 134 aa, chain + ## HITS:1 COG:ECs1452 KEGG:ns NR:ns ## COG: ECs1452 COG1558 # Protein_GI_number: 15830706 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 223 100.0 8e-59 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG GVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN TVKSMMLKTLTLGQ >gi|299857010|gb|ADWS01000054.1| GENE 16 11109 - 11804 805 231 aa, chain + ## HITS:1 COG:ECs1453 KEGG:ns NR:ns ## COG: ECs1453 COG1843 # Protein_GI_number: 15830707 # Func_class: N Cell motility # Function: Flagellar hook capping protein # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 312 99.0 3e-85 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN VAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII >gi|299857010|gb|ADWS01000054.1| GENE 17 11829 - 13034 1263 401 aa, chain + ## HITS:1 COG:ECs1454 KEGG:ns NR:ns ## COG: ECs1454 COG1749 # Protein_GI_number: 15830708 # Func_class: N Cell motility # Function: Flagellar hook protein FlgE # Organism: Escherichia coli O157:H7 # 1 401 1 401 401 620 98.0 1e-177 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPTGTAEPAMKLVFNANGVLTSNP TENITTGAINGADPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR >gi|299857010|gb|ADWS01000054.1| GENE 18 13054 - 13809 650 251 aa, chain + ## HITS:1 COG:flgF KEGG:ns NR:ns ## COG: flgF COG4787 # Protein_GI_number: 16129040 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Escherichia coli K12 # 1 251 1 251 251 416 98.0 1e-116 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS TPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTGQLTIQGHPV IGEAGPIAVPEGGEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFR LSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDN AGRANQLLSMS >gi|299857010|gb|ADWS01000054.1| GENE 19 13947 - 14729 981 260 aa, chain + ## HITS:1 COG:ECs1456 KEGG:ns NR:ns ## COG: ECs1456 COG4786 # Protein_GI_number: 15830710 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Escherichia coli O157:H7 # 1 260 1 260 260 434 100.0 1e-122 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY EINSKAVSTTDQMLQKLTQL >gi|299857010|gb|ADWS01000054.1| GENE 20 14782 - 15480 725 232 aa, chain + ## HITS:1 COG:ECs1457 KEGG:ns NR:ns ## COG: ECs1457 COG2063 # Protein_GI_number: 15830711 # Func_class: N Cell motility # Function: Flagellar basal body L-ring protein # Organism: Escherichia coli O157:H7 # 1 232 1 232 232 411 99.0 1e-115 MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAQPINY GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA RADVEASGGNTFNGKGGANASNTFNGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM >gi|299857010|gb|ADWS01000054.1| GENE 21 15492 - 16589 961 365 aa, chain + ## HITS:1 COG:flgI KEGG:ns NR:ns ## COG: flgI COG1706 # Protein_GI_number: 16129043 # Func_class: N Cell motility # Function: Flagellar basal-body P-ring protein # Organism: Escherichia coli K12 # 1 365 1 365 365 556 100.0 1e-158 MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQ TLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGT LLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQLNGGRITNGAVIERELPSQFG VGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQ NMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPDTPFGGG QTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLRA KLEII >gi|299857010|gb|ADWS01000054.1| GENE 22 16589 - 17530 1006 313 aa, chain + ## HITS:1 COG:flgJ_1 KEGG:ns NR:ns ## COG: flgJ_1 COG3951 # Protein_GI_number: 16129044 # Func_class: M Cell wall/membrane/envelope biogenesis; N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Rod binding protein # Organism: Escherichia coli K12 # 1 167 1 167 167 289 99.0 4e-78 MISDSKLLASAAWDAQSLNELKAKAGEDPAANIRPVARQVEGMFVQMMLKSMRDALPKDG LFSSEHTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTPEQPLPEEPTPAAPMKFPLET VVRYQNQALSQLVQKAVPRNYDDSLPGDSKAFLAQLSLPAQLASQQSGVPHHLILAQAAL ESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAKKVKAKFRVYSSYL EALSDYVGLLTRNPRYAAVTTAASAEQGAQALQDAGYATDPHYARKLTNMIQQMKSISDK VSKTYSMNIDNLF >gi|299857010|gb|ADWS01000054.1| GENE 23 17596 - 19239 1487 547 aa, chain + ## HITS:1 COG:flgK KEGG:ns NR:ns ## COG: flgK COG1256 # Protein_GI_number: 16129045 # Func_class: N Cell motility # Function: Flagellar hook-associated protein # Organism: Escherichia coli K12 # 1 547 1 547 547 878 99.0 0 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVNV SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTL VSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLN DQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST ARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQ LALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPAILQNTKNKGDVAIGATVTDASGVLAT DYKISFDNNQWQVTRLASNTTFTVTPDANGKVAFDGLELTFTGTPAVNDSFTLKPVSDAI VNMDVLITDEAKIAMASEEDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYASLVSDIG NKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIF DALINIR >gi|299857010|gb|ADWS01000054.1| GENE 24 19251 - 19995 663 248 aa, chain + ## HITS:1 COG:ECs1461 KEGG:ns NR:ns ## COG: ECs1461 COG1344 # Protein_GI_number: 15830715 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Escherichia coli O157:H7 # 1 248 1 248 317 401 99.0 1e-112 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ LLNLANTTDGNGRYIFAGYKTETAPFSEANGDYVGGTESIKQQVDASRSMVIGHTGDKIF DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSL NNVLTVRA Prediction of potential genes in microbial genomes Time: Sun May 15 22:55:12 2011 Seq name: gi|299857009|gb|ADWS01000055.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont54.1, whole genome shotgun sequence Length of sequence - 15547 bp Number of predicted genes - 13, with homology - 13 Number of transcription units - 6, operones - 3 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 413 - 472 2.4 1 1 Op 1 . + CDS 558 - 1676 873 ## COG2170 Uncharacterized conserved protein 2 1 Op 2 . + CDS 1742 - 1990 307 ## S0495 hypothetical protein + Term 1999 - 2033 -1.0 3 1 Op 3 4/1.000 + CDS 2055 - 2423 300 ## COG2315 Uncharacterized protein conserved in bacteria + Prom 2429 - 2488 3.5 4 1 Op 4 3/1.000 + CDS 2517 - 3170 834 ## COG0778 Nitroreductase + Term 3180 - 3210 3.7 + Prom 3198 - 3257 4.2 5 2 Tu 1 . + CDS 3278 - 4525 1322 ## COG0668 Small-conductance mechanosensitive channel + Term 4566 - 4621 1.8 - Term 4523 - 4561 8.5 6 3 Tu 1 . - CDS 4593 - 5969 1564 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 5999 - 6058 3.5 7 4 Op 1 11/0.000 - CDS 6071 - 9214 3192 ## COG3696 Putative silver efflux pump 8 4 Op 2 3/1.000 - CDS 9226 - 10449 1282 ## COG0845 Membrane-fusion protein 9 4 Op 3 3/1.000 - CDS 10465 - 10797 471 ## COG5569 Uncharacterized conserved protein 10 4 Op 4 . - CDS 10821 - 12203 478 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 - Prom 12318 - 12377 3.9 + Prom 12162 - 12221 2.7 11 5 Op 1 40/0.000 + CDS 12360 - 13043 717 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 12 5 Op 2 2/1.000 + CDS 13033 - 14481 1039 ## COG0642 Signal transduction histidine kinase + Term 14498 - 14533 -0.5 + Prom 15032 - 15091 6.0 13 6 Tu 1 . + CDS 15218 - 15545 288 ## COG3501 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|299857009|gb|ADWS01000055.1| GENE 1 558 - 1676 873 372 aa, chain + ## HITS:1 COG:ECs0619 KEGG:ns NR:ns ## COG: ECs0619 COG2170 # Protein_GI_number: 15829873 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 785 98.0 0 MPLPDFHVSEPFTLGIELKMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLE LATDVCRDINQAAGQFSAMQKVVLQAAADHHLEICGGGTHPFQKWQRQEVCDNERYQRTL ENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFAS SRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRV MDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPH TGDRRPLTEDTLRLLEKIAPSAHKMGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIG LVKKHCEIWAGD >gi|299857009|gb|ADWS01000055.1| GENE 2 1742 - 1990 307 82 aa, chain + ## HITS:1 COG:no KEGG:S0495 NR:ns ## KEGG: S0495 # Name: ybdJ # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 82 1 82 82 100 100.0 1e-20 MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVTMFHLMDLSQLYTLLFCLWFL VLGAIEYFVLRFIWRRWFSLAD >gi|299857009|gb|ADWS01000055.1| GENE 3 2055 - 2423 300 122 aa, chain + ## HITS:1 COG:ECs0617 KEGG:ns NR:ns ## COG: ECs0617 COG2315 # Protein_GI_number: 15829871 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 122 1 122 122 248 100.0 2e-66 MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQK SLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRVR PG >gi|299857009|gb|ADWS01000055.1| GENE 4 2517 - 3170 834 217 aa, chain + ## HITS:1 COG:ECs0616 KEGG:ns NR:ns ## COG: ECs0616 COG0778 # Protein_GI_number: 15829870 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 217 1 217 217 423 100.0 1e-118 MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARV AKSAAGNYVFNERKILDASHVVVFCAKTAMDDAWLKLVVDQEDADGRFATPEAKAANDKG RKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGFDAAILDAEFGLKE KGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV >gi|299857009|gb|ADWS01000055.1| GENE 5 3278 - 4525 1322 415 aa, chain + ## HITS:1 COG:ybdG KEGG:ns NR:ns ## COG: ybdG COG0668 # Protein_GI_number: 16128560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli K12 # 1 415 1 415 415 800 99.0 0 MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVVLRTFEKRAIASSRLWL QIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFSLLD VILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAAVLM LVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIP TWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRFLDEDEMQRLNKAHLLKPYLTSRHQ EINEWNRQQGSTESILNLRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPGDNGLP LEIYAFTNTVVWLEYESIQADIFDHIFAIVEEFGLRLHQSPTGNDIRSLAGAFKQ >gi|299857009|gb|ADWS01000055.1| GENE 6 4593 - 5969 1564 458 aa, chain - ## HITS:1 COG:pheP KEGG:ns NR:ns ## COG: pheP COG1113 # Protein_GI_number: 16128559 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 458 1 458 458 835 99.0 0 MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGY GVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELT AAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGL WLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEK SIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVI LVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSCRGVPINSLMLSGAITSLVVLINY LLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKALLYPFGNYLCIAF LGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKTLRRK >gi|299857009|gb|ADWS01000055.1| GENE 7 6071 - 9214 3192 1047 aa, chain - ## HITS:1 COG:ybdE KEGG:ns NR:ns ## COG: ybdE COG3696 # Protein_GI_number: 16128558 # Func_class: P Inorganic ion transport and metabolism # Function: Putative silver efflux pump # Organism: Escherichia coli K12 # 1 1047 1 1047 1047 2028 99.0 0 MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSDVQVIIKTSYPGQAPQI VENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDPYWARSRVLEYLNQVQGK LPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQDWFLKYELKTIPDVAEVASV GGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAGGSSIELAEAEYMVRASGYLQTL DDFNHIVLKASENGVPVYLRDVAKVQIGPEMRRGIAELNGEGEVAGGVVILRSGKNAREV IAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHV RSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEE WQHQHPDATLDNKTRWQVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGRLFGPLAF TKTYAMAGAALLAIVVIPILMGYWIRGKIPPESSNPLNRFLIRVYHPLLLKVLHWPKTTL LVAALSVLTVLWPLNKVGGEFLPQINEGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVP EVARVFGKTGKAETATDSAPLEMVETTIQLKPQDQWRPGMTMDKIIEELDNTVRLPGLAN LWVPPIRNRIDMLSTGIKSPIGIKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEG GRYINVEINREKAARYGMTVADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSP QALRQLPILTPMKQQITLADVADVKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDL QKAIAEKVQLKPGTSVAFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLI ISSVPFALVGGIWLLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAEPSLNN PQTFSEQKLDEALYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGM ITAPLLSLFIIPAAYKLMWLHRHRVRK >gi|299857009|gb|ADWS01000055.1| GENE 8 9226 - 10449 1282 407 aa, chain - ## HITS:1 COG:ECs0612 KEGG:ns NR:ns ## COG: ECs0612 COG0845 # Protein_GI_number: 15829866 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 407 1 407 407 768 98.0 0 MKKIALIIGSMIAGGIISAAGFTWFDRAEPPAEKTSTAERKILFWYDPMYPNTRFDKPGK SPFMDMDLVPKYADEESSASGVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYQ YAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEG ILERLRLAGMPEADIRRLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQG MDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEV DNADEALKPGMNAWLQLNTASEPMLLIPSQALIDTGNEQRVITVDADGRFVPKRVAVFQA SQGVTALHSGLAEGEKVVSSGLFLIDSEANISGALERMRSESATHAH >gi|299857009|gb|ADWS01000055.1| GENE 9 10465 - 10797 471 110 aa, chain - ## HITS:1 COG:ylcC KEGG:ns NR:ns ## COG: ylcC COG5569 # Protein_GI_number: 16128556 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 110 1 110 110 193 98.0 6e-50 MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVVKGVDLESKKITIHHDP IAAVNWPEMTMRFTITSQTKMSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ >gi|299857009|gb|ADWS01000055.1| GENE 10 10821 - 12203 478 460 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 12 459 11 457 460 188 28 2e-47 MSPCKLLPFCVALALTGCSLAPDYQRPAMPVPQQFSLSQNGLVNAADNYQNAGWRTFFVD NQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTAT TREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAY AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN ALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ QSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYL EVLDAERSLFATRQTLLDLNYARQVNEISLYTALGGGWQQ >gi|299857009|gb|ADWS01000055.1| GENE 11 12360 - 13043 717 227 aa, chain + ## HITS:1 COG:ECs0609 KEGG:ns NR:ns ## COG: ECs0609 COG0745 # Protein_GI_number: 15829863 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 227 1 227 227 432 100.0 1e-121 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGW DIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGA AVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLEFFLRHQGEVLPRSLIASQVW DMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVGYMLEVPDGQ >gi|299857009|gb|ADWS01000055.1| GENE 12 13033 - 14481 1039 482 aa, chain + ## HITS:1 COG:ECs0608 KEGG:ns NR:ns ## COG: ECs0608 COG0642 # Protein_GI_number: 15829862 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 481 1 481 482 921 98.0 0 MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFAEQDINDLKEISATLER VLNHPDETQARRLMTLEDIVSGYSNVLISLADSHGKTVYHSPGAPDIREFARDAIPDKDA RGGEVYLLSGPTIMMPGHGHGHMEHSNWRMINLSVGPLVDGKPIYTLYIALSIDFHLHYI NDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSRQIQNITSKDLDVRLDPQTVPIE LEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELEDV LYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKKMLNLADEVGKVFDFFEALAEDRGVEL RFVGDECQVAGDPLMLRRALSNLLSNALRYTPPGEAIVVRCQTVDHQVQVTVENPGTPIA PEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHKGTVAVTSDARGTRFVIMLPE RE >gi|299857009|gb|ADWS01000055.1| GENE 13 15218 - 15545 288 109 aa, chain + ## HITS:1 COG:ECs0607 KEGG:ns NR:ns ## COG: ECs0607 COG3501 # Protein_GI_number: 15829861 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 1 109 633 194 99.0 3e-50 MSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFAQVLDKMAYL TIWQGDDVQRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFR Prediction of potential genes in microbial genomes Time: Sun May 15 22:55:19 2011 Seq name: gi|299857008|gb|ADWS01000056.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont55.1, whole genome shotgun sequence Length of sequence - 12763 bp Number of predicted genes - 13, with homology - 13 Number of transcription units - 4, operones - 2 average op.length - 5.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.000 + CDS 60 - 491 312 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 2 1 Op 2 2/0.000 + CDS 503 - 1135 433 ## COG0036 Pentose-5-phosphate-3-epimerase 3 1 Op 3 1/0.000 + CDS 1152 - 1934 526 ## COG1349 Transcriptional regulators of sugar metabolism + Prom 2066 - 2125 4.3 4 1 Op 4 . + CDS 2237 - 3025 505 ## COG1414 Transcriptional regulator 5 1 Op 5 2/0.000 + CDS 2976 - 3935 778 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 6 1 Op 6 2/0.000 + CDS 3946 - 5913 1467 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Prom 5915 - 5974 4.0 7 1 Op 7 . + CDS 6020 - 7369 988 ## COG2610 H+/gluconate symporter and related permeases + Term 7371 - 7408 -0.8 + Prom 7580 - 7639 3.7 8 2 Tu 1 . + CDS 7824 - 8702 579 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain + Term 8715 - 8752 6.2 - Term 8703 - 8738 5.0 9 3 Tu 1 . - CDS 8743 - 9747 716 ## ECUMN_4892 putative integral membrane protein; putative sugar permease - Prom 9785 - 9844 3.0 - Term 9786 - 9819 5.1 10 4 Op 1 . - CDS 9851 - 10492 325 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 11 4 Op 2 . - CDS 10523 - 11242 368 ## COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 12 4 Op 3 23/0.000 - CDS 11282 - 11488 125 ## COG2801 Transposase and inactivated derivatives - Prom 11528 - 11587 2.8 - Term 12096 - 12127 -0.8 13 4 Op 4 . - CDS 12148 - 12459 174 ## COG2963 Transposase and inactivated derivatives - Prom 12479 - 12538 3.1 Predicted protein(s) >gi|299857008|gb|ADWS01000056.1| GENE 1 60 - 491 312 143 aa, chain + ## HITS:1 COG:sgcA KEGG:ns NR:ns ## COG: sgcA COG1762 # Protein_GI_number: 16132123 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 1 143 1 143 143 280 98.0 6e-76 MINDIKWVQAQREATDWRQAVEIATRPLVAYGAAQPCYVNGIIENTLNWGPYYLIAPGIA LPHARPEQGANYNQVSITTLRTPVAFGNEECDPVWLLLCVSATDANAHILTIQRISQFID SPQRLAAVGNASTDDALFALVSG >gi|299857008|gb|ADWS01000056.1| GENE 2 503 - 1135 433 210 aa, chain + ## HITS:1 COG:sgcE KEGG:ns NR:ns ## COG: sgcE COG0036 # Protein_GI_number: 16132122 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Escherichia coli K12 # 1 210 1 210 210 399 99.0 1e-111 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHP LSFHFMVARPQRWFNALAEIRPAWIFVHAETLDYPSETLTEIRHTGARAGLVFNPATPID AWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQTECWADGGITLAAAQQL AAAGAQHMVIGRALFSSSDYRATLAQFATL >gi|299857008|gb|ADWS01000056.1| GENE 3 1152 - 1934 526 260 aa, chain + ## HITS:1 COG:sgcR KEGG:ns NR:ns ## COG: sgcR COG1349 # Protein_GI_number: 16132121 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 260 1 260 260 536 99.0 1e-152 MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIANQYPGMIRGHGCLD FDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARV KVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALS LETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPE TIAQRYQRAGCQLFLPHSIK >gi|299857008|gb|ADWS01000056.1| GENE 4 2237 - 3025 505 262 aa, chain + ## HITS:1 COG:yjhI KEGG:ns NR:ns ## COG: yjhI COG1414 # Protein_GI_number: 16132120 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 262 1 262 262 529 99.0 1e-150 MVRKGCNSLVRAEKILTHIAWVGMASYMELLNKFQYPKSSLLNLLNVMVECGFLIKNKNG YYSLGIKNYELGCQALHRQNIFEVTKRPMQELSLKSGLVCHLGAMESISAIYLDKIESPD SVPTSKSWIGKKLELHITALGKALLAWKTREELDYFLEALTLTPHTRNTFTDKKLFLEEL QKTRLRGWAIDNEESTYGAVCLSMPVFNMYNRVNYAISLSGDPVVYSGNKIDSYLELLRK CAEQISYGLGYRNENEHLRKGN >gi|299857008|gb|ADWS01000056.1| GENE 5 2976 - 3935 778 319 aa, chain + ## HITS:1 COG:yjhH KEGG:ns NR:ns ## COG: yjhH COG0329 # Protein_GI_number: 16132119 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Escherichia coli K12 # 1 319 1 319 319 645 99.0 0 MGWDTETKMSIYEKETEVMKKFSGIIPPVSSTFHRDGTLDKKAMREVADFLINKGVDGLF YLGTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGVGSPSTDEAVKLAQHAQAYGADGI VAINPYYWKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENIVG IKDTIDSVGHLRTMINTVKSVRPSFSVFCGYDDHLLNTMLLGGDGAITASANFAPELSVG IYRAWREGDLATAATLNKKLLQLPAIYALETPFVSLIKYSMQCVGLPVETYCLPPILEAS EEAKDKVHVLLTAQGILPV >gi|299857008|gb|ADWS01000056.1| GENE 6 3946 - 5913 1467 655 aa, chain + ## HITS:1 COG:yjhG KEGG:ns NR:ns ## COG: yjhG COG0129 # Protein_GI_number: 16132118 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli K12 # 1 655 1 655 655 1312 99.0 0 MSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELD RDGILLLSTLGGLRGADGKPVALALHQGHYELDIQIKAAAEVIKANHALPYAVYVSDPCD GRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIA TVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAG TSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAM TVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAF MAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADE VIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEK SAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVS TGACIGHVGPEALAGGPIGKLRTGDVIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAI LNARPSHQDLLPDPELPDDTQLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN >gi|299857008|gb|ADWS01000056.1| GENE 7 6020 - 7369 988 449 aa, chain + ## HITS:1 COG:yjhF KEGG:ns NR:ns ## COG: yjhF COG2610 # Protein_GI_number: 16132117 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 449 1 449 449 695 100.0 0 MPLIIVVAGIALLLLLTIKIKLNTFVSLIIVSIAVAIASGMDLSKVVTSVESGLGGTLGH IGLIFGFGVMLGRLLADAGGAQRIALTMLNYFGKNKLDWAVVCSAFIVGIALFFEVGLIL LVPILFAIAREAKISPMFMCVPMLSGLLVAHGFLPPHPGPTVIAREYGADVGLVLIYGII VGIPTFILCGPVLNKFCQRIIPDAFKKEGNIASLGATRRFSESEMPGFGISFLTAMLPVI LMAVVTIIQMTHAKSAADSGLFYNVILFLGNSTIAMLISLLFAIYTMGLGRGKTIPDLMD SCGKAIAGIAGLLLIIGGGGAFKQVLIDSGVGQYISTLVSGMDINPILMAWGVAAFLRIC LGSATVAAISTAGLVIPLLAVHPNTNLALITLATGAGSCICSHVNDASFWMIKDFFGLTT KETLLSWTLMSTLLSISGLIFILLASLVL >gi|299857008|gb|ADWS01000056.1| GENE 8 7824 - 8702 579 292 aa, chain + ## HITS:1 COG:yjhU KEGG:ns NR:ns ## COG: yjhU COG2390 # Protein_GI_number: 16132116 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Escherichia coli K12 # 27 292 1 266 266 531 99.0 1e-151 MGVSRVTVVKYLQTARENGLVHINLDVNVFGSIDAALQIRDKFNLQRVIIVPDGEHAGKR DDTKLMRTRLSRAGGMYLNQVIENGDVLGVAWGRTIHQMSKTMTPKSCKNVTVIQMLGSM PSQPDLTIIESSSQIAYKLSGRVASLHVPAVVSSARLAMELQAEPIIRSNFDVLTRCTKA FFVVGNALDENPLIRVGVLNKKEMQTYRDLGAVGVICGRFYDKEGMPVVADVDQRILGIS LAQLRQIERKIFLAGGERGYDATLGALLGGYVTDLIVDEGTAEFLLACELPH >gi|299857008|gb|ADWS01000056.1| GENE 9 8743 - 9747 716 334 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_4892 NR:ns ## KEGG: ECUMN_4892 # Name: not_defined # Def: putative integral membrane protein; putative sugar permease # Organism: E.coli_UMN026 # Pathway: not_defined # 1 334 1 334 334 582 99.0 1e-165 MFIVESYAVAIIMCFITMICWGSWANTTKLVSNKKWEFPLFYWDYSIGLLLCSLLFAFTL GSMGEAGRSFIPDIQQASSSSLMSAILAGIIFNISNILLVASINLAGMAVAFPVGVGLAL ALGVITTYIGNPQGDPLILFLGVACVVIAIIFTAIAYGRVTQEADKSRRNKGLITAILAG IIMGWFFRFLADSMSDNFSQPASGLMTPYSALVLFAVGLFLSNFVLNTLVMKKPISGEPV NGKMYFSGSLRDHVCGWLGGMIWCVGLAFSLIASGQAGYAISYGLGQGATMIAVIWGVFI WREFASAPAGTNKLLLTMFISYIVGIVLIIAANQ >gi|299857008|gb|ADWS01000056.1| GENE 10 9851 - 10492 325 213 aa, chain - ## HITS:1 COG:fucA KEGG:ns NR:ns ## COG: fucA COG0235 # Protein_GI_number: 16130707 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 212 1 212 215 257 58.0 1e-68 MERIKLAEKIISTCREMNASGLNQGTSGNVSARYTGGMLITPSGIAYSKMTPDMIVFVDD KGIPEAGKIPSSEWLFHLACYKARPELNAVIHTHAVNSTAVAIHNHSIPAIHYMVAVSGT DHIPCIPYYTFGSPELADGVSKGIRESKSLLMQHHGMLAMDVTLEKTLWLAGETETLADL YIKCGGLHHDVPVLSEAEMTIVLEKFKTYGLKA >gi|299857008|gb|ADWS01000056.1| GENE 11 10523 - 11242 368 239 aa, chain - ## HITS:1 COG:SMb20624 KEGG:ns NR:ns ## COG: SMb20624 COG0182 # Protein_GI_number: 16265284 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Sinorhizobium meliloti # 5 228 137 362 364 309 69.0 4e-84 MCEQIGLHGTEVIREIAQKKPAGSVVNILTHCNAGWLATVDWGTALSPIYKAHENGIPVH VWVDETRPRNQGGLTAFELGSHGIPHTLIADNAGGHLMQHGDVDLCIVGTDRTTARGDVC NKIGTYLKALAAHDNHVPFYVALPSPTIDWTIEDGKSIPIEQRDGKEQSHVYGINPQGEL SWVNTAPEGTRCGNYAFDVTPARYITGFITERGVCAASKSALADMFADLKSKALQGEQH >gi|299857008|gb|ADWS01000056.1| GENE 12 11282 - 11488 125 68 aa, chain - ## HITS:1 COG:Z5089 KEGG:ns NR:ns ## COG: Z5089 COG2801 # Protein_GI_number: 15804202 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 68 158 225 225 132 91.0 1e-31 MERFFRSLKTEWVPTNGYAGKDEARQQINDYILNYYNSVRPHHYNGGLTPEESENRYHFY CKTVANIT >gi|299857008|gb|ADWS01000056.1| GENE 13 12148 - 12459 174 103 aa, chain - ## HITS:1 COG:ECs4535 KEGG:ns NR:ns ## COG: ECs4535 COG2963 # Protein_GI_number: 15833789 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 103 13 116 116 163 97.0 7e-41 MNKKTKRTFTPEFRLECAQLIVDKGYSYRQASEAMNVGSTTLESWVRQLRRERQGITPSA TPITPDQQRIRELEKQVRRLEEQNTILKKATALLMSDSLNGSR Prediction of potential genes in microbial genomes Time: Sun May 15 22:55:28 2011 Seq name: gi|299857007|gb|ADWS01000057.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont56.1, whole genome shotgun sequence Length of sequence - 12720 bp Number of predicted genes - 19, with homology - 19 Number of transcription units - 11, operones - 5 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 168 - 605 159 ## ECO26_1774 hypothetical protein + Term 633 - 663 0.3 2 2 Op 1 . - CDS 583 - 903 338 ## ECUMN_1309 hypothetical protein from bacteriophage origin 3 2 Op 2 . - CDS 915 - 1148 133 ## SbBS512_E1430 hypothetical protein - Prom 1242 - 1301 4.7 + Prom 1908 - 1967 5.0 4 3 Op 1 . + CDS 1988 - 2311 82 ## COG4197 Uncharacterized protein conserved in bacteria, prophage-related 5 3 Op 2 . + CDS 2295 - 2720 335 ## ECO103_1180 putative phage regulatory protein + Term 2765 - 2809 2.1 6 4 Op 1 . + CDS 2818 - 3675 341 ## E2348C_1395 predicted replication protein 7 4 Op 2 . + CDS 3682 - 4428 306 ## COG1484 DNA replication protein 8 4 Op 3 . + CDS 4450 - 5220 494 ## SbBS512_E1435 hypothetical protein 9 4 Op 4 . + CDS 5236 - 5661 171 ## SbBS512_E1436 hypothetical protein + Prom 5749 - 5808 3.1 10 5 Tu 1 . + CDS 5836 - 6501 456 ## COG1636 Uncharacterized protein conserved in bacteria + Prom 6511 - 6570 5.0 11 6 Tu 1 . + CDS 6682 - 6894 164 ## G2583_1955 putative cell killing protein encoded within cryptic prophage CP-933M + Term 6965 - 6990 -0.5 - Term 6887 - 6924 3.1 12 7 Tu 1 . - CDS 6936 - 7115 74 ## S2141 hypothetical protein 13 8 Op 1 . + CDS 7408 - 8385 550 ## E2348C_1405 hypothetical protein 14 8 Op 2 . + CDS 8398 - 8772 241 ## COG4570 Holliday junction resolvase 15 8 Op 3 . + CDS 8769 - 9590 327 ## SSON_1260 antitermination protein Q + Term 9673 - 9700 -0.9 + TRNA 9734 - 9809 83.2 # Met CAT 0 0 + TRNA 9915 - 9991 83.9 # Arg TCT 0 0 + Prom 10907 - 10966 6.0 16 9 Tu 1 . + CDS 11121 - 11417 158 ## COG3064 Membrane protein involved in colicin uptake + Prom 11436 - 11495 1.8 17 10 Tu 1 . + CDS 11589 - 11963 118 ## EC55989_1718 putative TolA protein (fragment) of prophage + Term 12090 - 12118 1.0 + Prom 12063 - 12122 5.6 18 11 Op 1 . + CDS 12215 - 12430 270 ## APECO1_513 phage lysis protein 19 11 Op 2 . + CDS 12435 - 12720 289 ## SbBS512_E0945 hypothetical protein Predicted protein(s) >gi|299857007|gb|ADWS01000057.1| GENE 1 168 - 605 159 145 aa, chain + ## HITS:1 COG:no KEGG:ECO26_1774 NR:ns ## KEGG: ECO26_1774 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 54 44 97 98 103 96.0 2e-21 MNQLPRRALSRYGLTFQGNILSVNCQCRMLTRVRRTHSTSPVENSLITNPQEGEMSTEND EIINSLIRQINNFDKALQHAAARSDITLLAISFLASVMDKNEVVRQSLVDYIDSLQPGTF NHESFNHEKEHVKSVINSLILNQKN >gi|299857007|gb|ADWS01000057.1| GENE 2 583 - 903 338 106 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1309 NR:ns ## KEGG: ECUMN_1309 # Name: not_defined # Def: hypothetical protein from bacteriophage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 106 5 110 128 182 90.0 4e-45 MEFKDLPVPFQEMASNVVRSQLATLDLSTVEKETIDNISGNVRRAFIGLYEEKQLSDNQD LHEKYFLDLMDIIDKGFGLLMKKKGIRIEPLENYFATKSINSFDSK >gi|299857007|gb|ADWS01000057.1| GENE 3 915 - 1148 133 77 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E1430 NR:ns ## KEGG: SbBS512_E1430 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 77 1 77 77 133 97.0 2e-30 MTAGFNFNNYAAGFCSATPALRGNEVSMDTIELGNNESLVCGVFPNQDGTFTAMTYTRSK TFKTEAGARRWLTRNTD >gi|299857007|gb|ADWS01000057.1| GENE 4 1988 - 2311 82 107 aa, chain + ## HITS:1 COG:ECs1507 KEGG:ns NR:ns ## COG: ECs1507 COG4197 # Protein_GI_number: 15830761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria, prophage-related # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 211 100.0 3e-55 MKKDNYSFKRACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATKGGVLC EELRPDVDWTYLRRSSCYSQNMSMKQPNDENDHTRSIKRQMIHENQT >gi|299857007|gb|ADWS01000057.1| GENE 5 2295 - 2720 335 141 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1180 NR:ns ## KEGG: ECO103_1180 # Name: not_defined # Def: putative phage regulatory protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 141 1 141 141 270 100.0 1e-71 MKIKHEHIRMAMNAWAYPDGEKVPAAEIARTYFELGMTFPELYDDSHPEALARNTQKIFR WLDKDTPDAVEKMQALLPAIEKAMPPLLVARMRSHSSEYYREIVERRDRLVKDVDDFVAS AVVLYDQMNRGGPAGNAVVMH >gi|299857007|gb|ADWS01000057.1| GENE 6 2818 - 3675 341 285 aa, chain + ## HITS:1 COG:no KEGG:E2348C_1395 NR:ns ## KEGG: E2348C_1395 # Name: not_defined # Def: predicted replication protein # Organism: E.coli_0127 # Pathway: not_defined # 1 285 26 320 320 528 96.0 1e-149 MARLADYSNDEGVSWPAIETIRRQIGARSESTVKSAIAELAKEGWLTKEERKVGGRNVSN IYRLNVEKLEAAAAAARESYKPKRKISPAKNDPSTVDPSNFDGSTVDKKLPIRGAMIDPD PSVLKPDPSDKRSSCPDASQPDPQTAEQDFLTRHPDAVVFSAKKRQWGSQEDLVCAQWIW GRIVSLYEQAASYDGEITRPKEPNWTAWANDVRTMRMLDGRTHRQICEMFGRLQRDSFWV KNIMSPAKLREKWDELVIRLGRSPAQRCVNHISEPDTEIPPGFRG >gi|299857007|gb|ADWS01000057.1| GENE 7 3682 - 4428 306 248 aa, chain + ## HITS:1 COG:ECs1074 KEGG:ns NR:ns ## COG: ECs1074 COG1484 # Protein_GI_number: 15830328 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 480 97.0 1e-135 MKNIAAVGVLERIRRLAPQGSVPPYRTVEEWREWQLAEGRKRSEEINRQNRQLRVEKILN RSGIQPLHSKCSFANYQVQNDGQKYALSQAKSIADELMTGCTNFVFSGKTGTGKNHLAAA MGNRLMVKGRSVIIVTVSDVMSVLHDSYDNGKSGEKFLQELCGVDLLVLDEIGVQRETKN EQVVLHQIIDRRTASLCSVGMLTNLNHAAMSTLLGERIMDRMTMNGGRWVTFNWDSWRPN VSNMRVVK >gi|299857007|gb|ADWS01000057.1| GENE 8 4450 - 5220 494 256 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E1435 NR:ns ## KEGG: SbBS512_E1435 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 256 1 256 256 452 100.0 1e-126 METVSDALKALKKASSHVVAARLGISREEAVNELWELKRKGVVDKTGHTWFLAGEGESRV TEERPVKSEAQDMLTGEVEQKVTADMMIEFIGQDGAKTCEELAGKFGVSTRKVASTLAVV TATGRLARVNQNGKFRYCMPGDNLPAEPKAALVTESDGKAFPQPAGAALPVREAATQEEI KTETVADIVQPLPSFTETQADELIFPSLRRANLALRRAKSDVQKWERVCAALRELNKHRD IVRQITDSSRRVVSEK >gi|299857007|gb|ADWS01000057.1| GENE 9 5236 - 5661 171 141 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E1436 NR:ns ## KEGG: SbBS512_E1436 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 141 1 141 141 250 99.0 1e-65 MAKVFTQEEREKIKGQVVELVRLSGRETLRQLEARTGATRYLMSVLARELVASGDVYNSG YGLFPSEQARKDWQNARKKLSRAKVKKPAVVDPDLIWSLPDGEIRRYDRRLNIICRECRK SEAMQRVLAFYQGNVRYFRRY >gi|299857007|gb|ADWS01000057.1| GENE 10 5836 - 6501 456 221 aa, chain + ## HITS:1 COG:XF2273 KEGG:ns NR:ns ## COG: XF2273 COG1636 # Protein_GI_number: 15838864 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 8 216 8 215 236 359 79.0 3e-99 MTIADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNIHPQKEYL IRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTALYAA ENGFSVISSSLGISRWKNMQQVNECGRRAVAHYPGMVYWDYNWRKQGGSSRMIEISKREK FYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE >gi|299857007|gb|ADWS01000057.1| GENE 11 6682 - 6894 164 70 aa, chain + ## HITS:1 COG:no KEGG:G2583_1955 NR:ns ## KEGG: G2583_1955 # Name: not_defined # Def: putative cell killing protein encoded within cryptic prophage CP-933M # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 70 1 70 70 113 97.0 3e-24 MSHKCRLASYVPKGKGKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRLRTGQTEV AVFTAYEPEE >gi|299857007|gb|ADWS01000057.1| GENE 12 6936 - 7115 74 59 aa, chain - ## HITS:1 COG:no KEGG:S2141 NR:ns ## KEGG: S2141 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 59 99 159 159 90 78.0 2e-17 MPDGKVGIRIVKFGFVRHLFSLLAQQVSGVQADVRIVNQNARKKQNPPKRVKCGCVEDA >gi|299857007|gb|ADWS01000057.1| GENE 13 7408 - 8385 550 325 aa, chain + ## HITS:1 COG:no KEGG:E2348C_1405 NR:ns ## KEGG: E2348C_1405 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 1 325 25 349 349 650 98.0 0 MPVFHNTRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKSLLPFFSDERVIRAAGGAGALSD WLLRHVKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLGQLAHQNLSAW MIDVILHAMNGSQERELSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDI VPGEQTATSILKQRTKNLALLPHAHQEQHPLQEKTVVSIAVDPESPESFMKRPKRRRWVN EKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKSHDIFTLPLCREHHNELHADPLAF EEKHGSQVDLIFRFLDHAFATGVLG >gi|299857007|gb|ADWS01000057.1| GENE 14 8398 - 8772 241 124 aa, chain + ## HITS:1 COG:ECs1523 KEGG:ns NR:ns ## COG: ECs1523 COG4570 # Protein_GI_number: 15830777 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 124 1 124 124 210 88.0 6e-55 MLIDLVLPYPPTVNTYWRRRGSTYFISEEGKRYRRAVALIVRQQRLKLSLSGRLAIKVIA EPPDKRRRDLDNILKAPLDALTHAGVLMDDEQFDEINIVRGQPVSGGRMGVKIYPIMHEE QVKK >gi|299857007|gb|ADWS01000057.1| GENE 15 8769 - 9590 327 273 aa, chain + ## HITS:1 COG:no KEGG:SSON_1260 NR:ns ## KEGG: SSON_1260 # Name: not_defined # Def: antitermination protein Q # Organism: S.sonnei # Pathway: not_defined # 1 273 1 273 284 533 99.0 1e-150 MKLEDLPKYYSPKSPCLTDASASTSKDALSITDVMAAQGMTQNRAEMGFSAFLGKMGISM NDRARATELLADYALSRCDRVAALRKLPAEIKPLVMRIMASYAFEDYARSAASKKQCPCC YGEKFIESVVFTNKVQYPDGKPPVWAKCTKGVYPSYWEEWKKVREVVKVACPECGGKGEV STVCKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGYERLPSTEAFNAICEVTNQITRA SWEKTVKKFYDALVTRFDIEEAWAERQLKKVTR >gi|299857007|gb|ADWS01000057.1| GENE 16 11121 - 11417 158 98 aa, chain + ## HITS:1 COG:tolA KEGG:ns NR:ns ## COG: tolA COG3064 # Protein_GI_number: 16128714 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane protein involved in colicin uptake # Organism: Escherichia coli K12 # 13 98 336 421 421 93 60.0 8e-20 MSSSERTSDVSEDIRLYAHQIKSAIEKQFGDASKYSGKECTLRMHMAPNGLLLEVKRESG DLDLCREAMNAIKNADIPAPPSPEVYKVFQNGVLDFKP >gi|299857007|gb|ADWS01000057.1| GENE 17 11589 - 11963 118 124 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1718 NR:ns ## KEGG: EC55989_1718 # Name: not_defined # Def: putative TolA protein (fragment) of prophage # Organism: E.coli_55989 # Pathway: not_defined # 1 124 8 131 131 249 98.0 3e-65 MLTFWVGFVAGCTPLHPSDCHKTTATGSCSSGRWDDQDEWGAQARGIRAAINAKLDEPHN WKGKICRLHMEFSQDGTALKISTSNGDKAYCEAIKSAAHKAKFPAFNNPKVYRDFQKSGF DMRG >gi|299857007|gb|ADWS01000057.1| GENE 18 12215 - 12430 270 71 aa, chain + ## HITS:1 COG:no KEGG:APECO1_513 NR:ns ## KEGG: APECO1_513 # Name: not_defined # Def: phage lysis protein # Organism: E.coli_APEC # Pathway: not_defined # 1 71 30 100 100 132 95.0 3e-30 MKSMDKISTGIAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI KEDKRKAARGE >gi|299857007|gb|ADWS01000057.1| GENE 19 12435 - 12720 289 95 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E0945 NR:ns ## KEGG: SbBS512_E0945 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 95 1 95 114 177 97.0 1e-43 MTQKYELIVKGIRNFENKVTVTLALRDKERFDGEIFDLDISLDRVEGAALEFYEAAARRS IRQVFLDVAAGLCEGDEQSPEKRPVILEAQDVLIT Prediction of potential genes in microbial genomes Time: Sun May 15 22:56:07 2011 Seq name: gi|299857006|gb|ADWS01000058.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont57.1, whole genome shotgun sequence Length of sequence - 10990 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 3, operones - 2 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 3/0.000 - CDS 2 - 2684 1439 ## COG3209 Rhs family protein 2 1 Op 2 3/0.000 - CDS 2760 - 4901 1596 ## COG3501 Uncharacterized protein conserved in bacteria - Term 5059 - 5100 10.2 3 1 Op 3 . - CDS 5111 - 5629 607 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 4 2 Op 1 . + CDS 6326 - 6826 418 ## COG3516 Uncharacterized protein conserved in bacteria 5 2 Op 2 . + CDS 6861 - 7085 165 ## SSON_0253 hypothetical protein 6 2 Op 3 5/0.000 + CDS 7136 - 8611 1284 ## COG3517 Uncharacterized protein conserved in bacteria 7 2 Op 4 8/0.000 + CDS 8618 - 9031 283 ## COG3518 Uncharacterized protein conserved in bacteria 8 2 Op 5 . + CDS 9035 - 10744 1127 ## COG3519 Uncharacterized protein conserved in bacteria + Term 10794 - 10845 14.7 9 3 Tu 1 . - CDS 10737 - 10943 125 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|299857006|gb|ADWS01000058.1| GENE 1 2 - 2684 1439 894 aa, chain - ## HITS:1 COG:Z0268 KEGG:ns NR:ns ## COG: Z0268 COG3209 # Protein_GI_number: 15799917 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 EDL933 # 1 893 1 888 1404 1597 92.0 0 MGGKPAARQGDMTRKGLDIVQGSAGVLIGAPTGVACSVCPGGITYANPVNPLLGAKVLPG ETDLALPGPLPFILSRAYSSYRTRTPAPVGVFGPGWKAPFDIRLQIRDEGLILNDSGGRS IHFEPLFPGEISYSRSESLWLARGGVAAQHSSQPLSALWQVLPEDVRLSPHVYLATNSLQ GPWWILSWPERVPGADEVLPPPPPAYRVLTGVVDGFGRTLAFHRAAEGDVAGAVTGVTDG AGRRFHLVLTTQAQRAEVFRKQRATSLSSPAGPRSASSSLVFPDTLPAGTGYGTDNGIRL EAVWLTHDPAYPDEQPTAPLARYTYTASGELRAVYDRSGTQVRGFAYDAEHAGRMVAHHY AGRPESRYRYDDTGRVTEQVNPEGLDYRFEYGQDRVTITDSLNRREVLYTEGEGGLKRVV KKEHADGSITRSEYDEAGRLKAQTDAAGRRTEYRLHMASGAVTAVTGPDGRTVRYGYNSQ RQVTSVTYPDGLRSSREYDEKGRLTAETSRSGETTRYSYDDPASELPTGIQDATGSTKQM AWSRYGQLLAFTDCSGYTTRYEYDRYGQQIAVHREEGISTYSSYNPRGQLVSQKDAQGRE TRYEYSAAGDLTATVSPDGKRSTIEYDKRGRPVSVTEGGLTRSMGYDAAGRITVLTNENG SQSTFRYDPVDRLTEQRGFDGRTQRYHYDLTGKLTQSEDEGLITLWHYDASDRITHRTVN GDPAEQWQYDEHGWLTTISHTSEGHRVAVHYGYDDKGRLTGERQTVENPETGEMLWQHET KHAYNEQGLANRVTPDSLPPVEWLTYGSGYLAGMKLGGTPLVEYTRDRLHRETVRSFGSR AGSNAAYELTSTYTPAGQLQSQHLNSLVYDRDYGWNDNGDLVRISGPRQTREYG >gi|299857006|gb|ADWS01000058.1| GENE 2 2760 - 4901 1596 713 aa, chain - ## HITS:1 COG:Z0267 KEGG:ns NR:ns ## COG: Z0267 COG3501 # Protein_GI_number: 15799916 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 713 1 713 713 1421 98.0 0 MSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFQQILDKMAYL TIWQGDDVQRRVKGMVTWFELGENDKNQMLYSMKVCPPLWRTGLRQNFRIFQNEDIESIL GTILQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFFYEEHAQKSTDQS LVLCDTVRYLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTKDYTFKRPGWAGR FDQEGQYQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVARGTSRSPEIWPGR RIALTGHPQANLNREWQVVASELHGEQPQAVPGRSGSGTTLNNHFAVIPADRTWRPQPLL KPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPSNQDSSCWIRVAQAWAGTGFG NLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHQENRTPGSLPGTKTQMTIRSKTYKGSGFN ELKFDDATGKEQVYIHAQKNMNTEVLNNRTTDVINNHAEKIGNNQAITVTNNQIQNIGVN QIQTVGVNQVETVGSNQIIKVGSNQVEKVGIIRALTVGVAYQTTVGGIMNTSVALLQSSQ VGLHKSLMVGMGYSVNVGNNVTFSVGKTMKENTGQTAVYSAGEHLELCCGKARLVLTKDG SIFLNGTHIHLEGESDVNGDAPVINWNCGATQPVPDAPVPKDLPPGMPDMRQF >gi|299857006|gb|ADWS01000058.1| GENE 3 5111 - 5629 607 172 aa, chain - ## HITS:1 COG:ECs0234 KEGG:ns NR:ns ## COG: ECs0234 COG3157 # Protein_GI_number: 15829488 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 348 100.0 2e-96 MPTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEFLHNVTVPTDPQSGQPA GQRAHKPFIFTVALNKAVPLMYNALASGEMLPTTELHWWRTSVEGKQEHYFTTRLTDSTI VDMKLHMPHCQDPAKREFTQLLEVSLAYRKIEWEHVKSGTSGADDWRAPLEA >gi|299857006|gb|ADWS01000058.1| GENE 4 6326 - 6826 418 166 aa, chain + ## HITS:1 COG:ECs0233 KEGG:ns NR:ns ## COG: ECs0233 COG3516 # Protein_GI_number: 15829487 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 286 97.0 1e-77 MSKKFEGSVAPRERINISYVPKTDGQTAEVELPLNMLVVGDTGNTQETSPLDERQAVSIN KHNFGAVMAEAAIGLNFTVPATLKGSTTDDELNVALNIKSLDDFSPDSVARQVPEVNKLL ELREALTALKGPMGNLPAFRTQLQALLENEESREQLLKEIGLVSNK >gi|299857006|gb|ADWS01000058.1| GENE 5 6861 - 7085 165 74 aa, chain + ## HITS:1 COG:no KEGG:SSON_0253 NR:ns ## KEGG: SSON_0253 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 74 1 74 74 138 100.0 6e-32 MTAHKNISGTYHLSVADILQVVYQVCFSPSVEINQDGVAALITTLDRRISDLLDEIIHFC EFQQSASHWQRVLH >gi|299857006|gb|ADWS01000058.1| GENE 6 7136 - 8611 1284 491 aa, chain + ## HITS:1 COG:ECs0231 KEGG:ns NR:ns ## COG: ECs0231 COG3517 # Protein_GI_number: 15829485 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 939 99.0 0 MSLQEEELVSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASA EPVNKLAVDSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVL HVTKQELLEDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQY VSAVGAMAHAPFLSSVSPEFMGLNSWTELTNIKDLYAIFEGPAYTKWRALRDSEDSRYLG LTAPRFLLRQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPN IIGPQSGGAVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAA FFSANSVQKPKHFPGKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLER ELNTWIRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWYQVALSVRPHFKFMGANF ELSLVGRLDRE >gi|299857006|gb|ADWS01000058.1| GENE 7 8618 - 9031 283 137 aa, chain + ## HITS:1 COG:ECs0230 KEGG:ns NR:ns ## COG: ECs0230 COG3518 # Protein_GI_number: 15829484 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 246 99.0 6e-66 MIPDRERTTGSLFERMEASSARNRQGGSIHSLRQSIRQNLRNILNTRSGSCRGAPELGID EPEGAENFRESMSRAIEQCIERYEPRISHAEVQAVVSSASSPLDMTFHITAWVTFNETHE VLEFDMAPNGSQHYRVD >gi|299857006|gb|ADWS01000058.1| GENE 8 9035 - 10744 1127 569 aa, chain + ## HITS:1 COG:ECs0229 KEGG:ns NR:ns ## COG: ECs0229 COG3519 # Protein_GI_number: 15829483 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 12 565 12 565 616 1142 100.0 0 MEFEERYFREELDYLRQLSKLLATEKPHLARFLAEKDADPDIERLLEGVAFLTGNLRQKI EDEFPELTHGLIKMLWPNYLRPVPAMTLIEYTPDMDKSSVPVLIPRNEQFTTNAGEIRVD EVLPSDAKKEEPPPCTFTLCRDIWLLPVRLEQIENRSTTRNGVINITFSVAPGTDFRTLD LNKLRFWLGNDDNYTRDQLYLWFCEYLQGADLTVGEQHIRLPEFMLKAVGFEPQDAMLPW PKNVHSGYRILQEYFCYPDAFLFFDLCGCPALPDGLQAEFFTLQLRFSRPLPVDIRLRRD SLRLYCAPAINLFIHHAEAITLDNRRADYPLVPSRHYPQHYDVFSVNSVVSQVQDMFRKK DLGRPVSTQAARQWPAFESFSHQMEYSRKREVVYWHHRTKTSLFHRGFDHTLAFIHADGS YPSDESLLSNEVVSVSLTCTNRELPSQIRSGDITGTTGKNAAVASFRNITRPTQPLWPVI DGSLHWSLLSAMNLNYLSLLDTDALKQVIANFDRHAIHHPQTARLSQQKLDAIERLETRP VDRLFTGIPVRGLASTLYLHPEPFVVVVK >gi|299857006|gb|ADWS01000058.1| GENE 9 10737 - 10943 125 68 aa, chain - ## HITS:1 COG:Z5089 KEGG:ns NR:ns ## COG: Z5089 COG2801 # Protein_GI_number: 15804202 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 68 158 225 225 132 91.0 1e-31 MERFFRSLKTEWVPTNGYAGKDEARQQINDYILNYYNSVRPHHYNGGLTPEESENRYHFY CKTVANIT Prediction of potential genes in microbial genomes Time: Sun May 15 22:56:11 2011 Seq name: gi|299857005|gb|ADWS01000059.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont58.1, whole genome shotgun sequence Length of sequence - 10364 bp Number of predicted genes - 12, with homology - 11 Number of transcription units - 3, operones - 2 average op.length - 5.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 54 - 431 186 ## COG1662 Transposase and inactivated derivatives, IS1 family + Term 616 - 658 -0.7 + Prom 775 - 834 5.4 2 2 Op 1 . + CDS 926 - 1210 339 ## p1ECUMN_0088 conjugal transfer pilin chaperone TraQ 3 2 Op 2 . + CDS 1197 - 1742 493 ## p1ECUMN_0087 conjugal transfer protein TrbB 4 2 Op 3 . + CDS 1732 - 2019 189 ## p1ECUMN_0086 conjugal transfer protein TrbJ 5 2 Op 4 . + CDS 2000 - 2392 273 ## ECO26_p2-67 conjugal transfer protein TrbF 6 2 Op 5 . + CDS 2379 - 3752 1157 ## p1ECUMN_0084 conjugal transfer pilus assembly protein TraH 7 2 Op 6 . + CDS 3749 - 6568 2059 ## ECO26_p2-71 conjugal transfer mating pair stabilization protein TraG 8 2 Op 7 . + CDS 6571 - 6765 65 ## 9 2 Op 8 . + CDS 6800 - 7084 89 ## ECO26_p2-72 conjugal transfer protein TraS 10 2 Op 9 . + CDS 7116 - 7847 775 ## EcSMS35_A0012 conjugal transfer surface exclusion protein TraT + Prom 7877 - 7936 5.9 11 3 Op 1 . + CDS 8146 - 8829 133 ## p1ECUMN_0080 hypothetical protein 12 3 Op 2 . + CDS 8826 - 10362 1525 ## COG3505 Type IV secretory pathway, VirD4 components Predicted protein(s) >gi|299857005|gb|ADWS01000059.1| GENE 1 54 - 431 186 125 aa, chain + ## HITS:1 COG:insB_g4 KEGG:ns NR:ns ## COG: insB_g4 COG1662 # Protein_GI_number: 16128954 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 125 43 167 167 233 94.0 6e-62 MDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDG WPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLN IKHYQ >gi|299857005|gb|ADWS01000059.1| GENE 2 926 - 1210 339 94 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0088 NR:ns ## KEGG: p1ECUMN_0088 # Name: traQ # Def: conjugal transfer pilin chaperone TraQ # Organism: E.coli_UMN026 # Pathway: not_defined # 1 94 1 94 94 165 97.0 6e-40 MISKCRFSLPRLDITGMWVFALGVWFHIVARLVYSKPWMAFFLAELIAAILVLFGAYQVL DAWIARVSLEEREALEARQQAMMEGQQEGGHVSH >gi|299857005|gb|ADWS01000059.1| GENE 3 1197 - 1742 493 181 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0087 NR:ns ## KEGG: p1ECUMN_0087 # Name: trbB # Def: conjugal transfer protein TrbB # Organism: E.coli_UMN026 # Pathway: not_defined # 1 181 1 181 181 343 99.0 1e-93 MSLTKLLPVILLMMATGVQASTRDEIERLWNPQGMAVQPAQPAADTSARTEKPAPRWFRL SNGRQVNLADWKVVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQGDTAFPEALP VPPDVMQTFFPNIPVATPTTFLVNVNTLEALPLLQGATDAASFMARMDTVLQIYGEEKGA K >gi|299857005|gb|ADWS01000059.1| GENE 4 1732 - 2019 189 95 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0086 NR:ns ## KEGG: p1ECUMN_0086 # Name: trbJ # Def: conjugal transfer protein TrbJ # Organism: E.coli_UMN026 # Pathway: not_defined # 1 95 32 126 126 164 92.0 1e-39 MRNKQVVLLIAGISGIATGIIVSLNIPFIRQGLFYPASPVEIVVSLCLTFSVSVVFFVGA IVGWISVSEIYYSRMTCLHESSEISEGTYDERKNK >gi|299857005|gb|ADWS01000059.1| GENE 5 2000 - 2392 273 130 aa, chain + ## HITS:1 COG:no KEGG:ECO26_p2-67 NR:ns ## KEGG: ECO26_p2-67 # Name: not_defined # Def: conjugal transfer protein TrbF # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 130 1 130 130 151 59.0 6e-36 MKEKINDTEPGIKQIEREIERGCDNAKKYFWLFVVFFAAGLIVRNVMHDFFSAGIDSWKA DPELNNFRYMWNTLMYVIPIMLYALAAGFLAAASLSPLCEIIFGGVRIFLLKRRMRRENT LREGSNNASH >gi|299857005|gb|ADWS01000059.1| GENE 6 2379 - 3752 1157 457 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0084 NR:ns ## KEGG: p1ECUMN_0084 # Name: traH # Def: conjugal transfer pilus assembly protein TraH # Organism: E.coli_UMN026 # Pathway: not_defined # 1 457 4 460 460 841 94.0 0 MLRIKPLLVLCAALLTFTPAASADVNSDMNQFFNKLGFASNTTQPGVWQGQAAGYAYGGS LYARTQVKNIQLISMTLPDINAGCGGIDAYLGSFSFINGDQLQRFVKQIMSNAAGYFFDL ALQTTVPEIKTAKDFLQKMASDINSMNLSSCQVAQGLVGGLFPQTQESQQKVCQDIGSES NIFADWAASRQGCTVGGQSSSVRDKASDKDKERVLKNQNIIWEALKKNRMFDGNKELKEF IMTLTGTLIFGEDSEITPLPARTTDRDILRAIMEGGTAKIYHCNDSDKCLKVVADANVTI ARDKALKSQITKLLTSIQNKAVSDTPLDAREQGFISSTTIPVFKYLIDPQMLGVSNSVVY QLTDYIGYDIMLQYIQELLQQARAMIATGNYPQAVMDNVLENLNQAQQQIAIFQSQVQVQ QDALLVVERQMSYMRQQLSARMLSRYQNNYHFGGNSL >gi|299857005|gb|ADWS01000059.1| GENE 7 3749 - 6568 2059 939 aa, chain + ## HITS:1 COG:no KEGG:ECO26_p2-71 NR:ns ## KEGG: ECO26_p2-71 # Name: not_defined # Def: conjugal transfer mating pair stabilization protein TraG # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 939 1 939 939 1672 95.0 0 MNEVYVIAGGEWLRNNLNAIAAFMSTRTWDSIEKIALTLSVLAVAVMWVQRHNVMDLLGW VAVFVLISLLVNVRTSVQIIDNSDLVKVHRVDNVPVGLAMPLSLTTRIGHAMVVSYEMIF TQPDSVTYSKTGMLFGANLIVKSTDFLSRNPEIINLFQDYVQNCVLGDIYLNHKYTLEDL MASADPYTLIFSRPSPLRGVYDNNNNFITCKDASVTLKDRLNLDTKTGGKTWHYYVQQIF GGRPDPDLLFRQLVSDSYSYFYGSSQSASQIMRQNVTINALKEGITSNAARNGDTASLVN LATTSSMEKQRLAHVSIGHVTMRNLPMVQTILTGIAIGIFPLLVLAAVFNKLTLSVLKGY VFALMWLQTWPLLYAILNSAMTFYAKMNGAPVVLSELSQIQLKYSDLASTAGYLSAMIPP LSWMMVKGLGAGFSSVYSHFASSSISPTASAAGSVVDGNYSYGNMQTENVNGFSWSTNST TSFGQMMYQTGSGATATQTRDGNMVMDASGAMSRLPVGINATRQIAAAQQEMAREASNRA ESALHGFSSSIASAWNTLSQFGSNRGSSDSVTGGADSTMSAQDSMMASRMRSAMESYAKA HNISNEQATQELASRSTRASAGMYGDAHAEWGVKPKILGVGGGLGVRGGGRAGIDWSDDD AHQASSGSRASNDARHDIDARATQDFKEASDYFTSRKVSESGSHTDNNADSRVDQLSAAL NSAKQSYDQYTTNMTRSHEYAEMASRTESMSGQMSEDLSQQFAQYVMKHAPQDAEAILTN TSSPEIAERRRAMAWSFVQEQIQPGVDNAWRESRGDIGKGMESVPSGGGSQDIIADHQGH QAIIEQRTQDSNIRNDVKHQVDNMVTEYKGNIGDTQNSIRGEENIVRGQYSELQNHHKTE ALSQNNKYNEEKSVQERMPGADSPQELMKRAKEYQDKYK >gi|299857005|gb|ADWS01000059.1| GENE 8 6571 - 6765 65 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLCLGDDNEMSSPYCSGNGDTVYRLLSGWLGEGRNSFYAVLHSAMAGTVYMVVLSNTKKT ECVG >gi|299857005|gb|ADWS01000059.1| GENE 9 6800 - 7084 89 94 aa, chain + ## HITS:1 COG:no KEGG:ECO26_p2-72 NR:ns ## KEGG: ECO26_p2-72 # Name: not_defined # Def: conjugal transfer protein TraS # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 94 70 163 163 179 100.0 3e-44 MPVSSLLSPLLSLMVFIIGTLYELRRVSGCISIKKWGQNQLKNQYDGSEKLDFGGIEQPP TTYYNPSTGYPMHGGFDSAGNTFGTRWQDYYDRQ >gi|299857005|gb|ADWS01000059.1| GENE 10 7116 - 7847 775 243 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0012 NR:ns ## KEGG: EcSMS35_A0012 # Name: traT # Def: conjugal transfer surface exclusion protein TraT # Organism: E.coli_SECEC # Pathway: not_defined # 1 243 1 243 243 391 99.0 1e-107 MKTKKLMMVALVSSTLALSGCGAMSTAIKKRNLEVKTQMSETIWLKPDSERTVFLQIKNT SDKDMSGLQGKIADAVKAKGYQVVTSPDKAYYWIQANVLKADKMDLRESQGWLNRGYEGA AVGAALGAGITGYNSNSAGATLGVGLAAGLVGMAADAMVEDVNYTMITDVQIAERTKATV TTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEDQLAKSIA NIL >gi|299857005|gb|ADWS01000059.1| GENE 11 8146 - 8829 133 227 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0080 NR:ns ## KEGG: p1ECUMN_0080 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 211 55 265 267 429 98.0 1e-119 MTTKDYLYSNNIDTDLLVVIGGLIVILFLMMLIMYFINSLRHKKLTEILGKISFPEKSGS NLLKPEAVSCNLLSLCVLAPVLCTPRKLAEVSREIIVASAQEIAWTPGSSRIDGHQGENI TWSLSSQSPADKYDLINKTSRVSPDSGRFYEPDTVLDHRERVRLFIQIQFPHGSDWSEVL RLTDIVTEKVSSGRAAGGYHHRHTGYTWSVSHIILFCPVPDFPGVSS >gi|299857005|gb|ADWS01000059.1| GENE 12 8826 - 10362 1525 512 aa, chain + ## HITS:1 COG:PSLT104_1 KEGG:ns NR:ns ## COG: PSLT104_1 COG3505 # Protein_GI_number: 17233468 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Salmonella typhimurium LT2 # 1 512 1 512 616 992 90.0 0 MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLILWVKISWQTFVNGCIY WWCTTLEGMRDLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVAL VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPII RDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVKSYYDPSIDKILNP LDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDPNRS YSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHN GEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRA FFRSPSHKIAEFAAGEIGEKEHLKASEQYSYG Prediction of potential genes in microbial genomes Time: Sun May 15 22:56:52 2011 Seq name: gi|299857004|gb|ADWS01000060.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont59.1, whole genome shotgun sequence Length of sequence - 9655 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 2, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 127 - 186 4.2 1 1 Op 1 4/0.000 + CDS 217 - 1899 1291 ## COG3119 Arylsulfatase A and related enzymes + Term 1912 - 1944 5.0 2 1 Op 2 1/0.000 + CDS 1951 - 3108 492 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) + Term 3161 - 3200 5.0 + Prom 3267 - 3326 7.4 3 2 Op 1 . + CDS 3492 - 5084 176 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 4 2 Op 2 . + CDS 5122 - 7494 1920 ## ECSE_1585 hypothetical protein + Term 7514 - 7543 -0.5 5 2 Op 3 . + CDS 7551 - 9654 1338 ## COG0612 Predicted Zn-dependent peptidases Predicted protein(s) >gi|299857004|gb|ADWS01000060.1| GENE 1 217 - 1899 1291 560 aa, chain + ## HITS:1 COG:ydeN KEGG:ns NR:ns ## COG: ydeN COG3119 # Protein_GI_number: 16129457 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Escherichia coli K12 # 1 560 12 571 571 1090 100.0 0 MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAFSDFTPTEYSTKGKPNI IVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAIEAAQKSTPTLLSLMDEGV RFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGIPLTETFLPELFQNHGYYTAA VGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQNRGFDYFMGFHAAGTAYYNSPS LFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPFMLYLAYNAPHLPNDNPAPDQYQKQ FNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQYDNTIILFTSDNGAVIDGPLPLNGAQ KGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKLISAMDFYPTALDAADISIPKDLKLDGVS LLPWLQDKKQGEPHKNLTWITSYSHWFDEENIPFWDNYHKFVRHQSDDYPHNPNTEDLSQ FSYTVRNNDYSLVYTVENNQLGLYKLTDLQQKDNLAAANPQVVKEMQGVVREFIDSSQPP LSEVNQEKFNNIKKALSEAK >gi|299857004|gb|ADWS01000060.1| GENE 2 1951 - 3108 492 385 aa, chain + ## HITS:1 COG:ydeM KEGG:ns NR:ns ## COG: ydeM COG0641 # Protein_GI_number: 16129456 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli K12 # 1 385 6 390 390 793 99.0 0 MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIKQYIAASGNQVYFTWQG GEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEWCAFLKEHEFLVGISIDGP QELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTVINNVNVHYPLEVYHFLKSIGS KHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAYGKFMSTIFMQWVKNDVGEIFIR QFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIYECDHFVYPQYKIGNINKSELKTMN SVQLTAQKKRISAKCLKCAYKPICNGGCPKHRITKVNNETVSYFCEGYKILFSTMVPYMN AMVELAKNRVPLYHIMDVAKQMENN >gi|299857004|gb|ADWS01000060.1| GENE 3 3492 - 5084 176 530 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 333 514 2 202 223 72 25 1e-12 MLLIIIILAMILGVVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISVN KTWLIKLLTIRWREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKT LSLSFGFIQSLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHK VGKRIRPLNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELSDNFHTIKENWHRL MNRQRWLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNLSWFIYK YDELAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVANASIRTPDNKIILENLNFHVS PGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKSGLLKEIICKA LPLPVDDKSLSEVLHQVGLGKLAARIHEHDRWGDILSSGEKQRIALARLILRRPKWIFLD ETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWNLADDICDISTVL >gi|299857004|gb|ADWS01000060.1| GENE 4 5122 - 7494 1920 790 aa, chain + ## HITS:1 COG:no KEGG:ECSE_1585 NR:ns ## KEGG: ECSE_1585 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 790 1 790 790 1518 99.0 0 MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVNGNTHYTSESIERLPTG NGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPYQNAYLIDGISATNNLNPA NESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFGRFNGGVIDAKIKRFNADDSK VKLGYRTTRSDWLTSHIDENNKSAFKQGSSGSTYYSPDFKKNFYTLSFNQELADNFGVTA GLSRRQSDITRADYVSNDGIVAGRAQYKNVIDTALSKFTWFASDRFTHDLTLKYTGSSRD YNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLRTTVGWDHISDYTRHDHDIWYTELSCT YGDITGRCTRGGLGHISQAVDNYTFKTRLDWQKFAVGNVSHQPYFGAEYIYSDAWTERHN QSESYVINAAGKKTNHTIYHKGKGSLGIDNYTLYMADHISWRNVSLMPGVRYDYDNYLSN HNISPRFMTEWDIFANQTSMITAGYNRYYGGNILDMGLRDIRNSWTESVSGNKTLTRYQN LKTPYNDELAMGLQQKIGKNVIARANYVYREAHDQISKSSRTDSATKTTITEYNNDGKTK THSFSLSFELAEPLHIRQVDINPQIVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVS YDSVPVADFNNPLKISLNMDFTHQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDY KQYVDEKLDSSLTWDTRLSWTPQFLKQQNLTISADILNVLDSKTAVDTTNTGVATYASGR TFWLDVSMKF >gi|299857004|gb|ADWS01000060.1| GENE 5 7551 - 9654 1338 701 aa, chain + ## HITS:1 COG:pqqL KEGG:ns NR:ns ## COG: pqqL COG0612 # Protein_GI_number: 16129453 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Escherichia coli K12 # 1 701 5 705 931 1278 99.0 0 MRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLGNGLRYMIYPHAHPKDQVNLWLQI HTGSLQEEDNERGVAHFVEHMMFNGTKTWPGNKVIETFESMGLRFGRDVNAYTSYDETVY QVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAERGVITEEWRAHQDAKWRTSQARRP FLLANTRNLDREPIGLMDTVATVTPAQLRQFYQRWYQPNNMTFIVVGDIDSKEALALIKD NLSKLPANKAAENRVWPTKAENHLRFNIINDKENRVNGIALYYRLPMVQVNDEQSFIEQA EWSMLVQLFNQRLQERIQSGELKTISGGTARSVKIAPDYQSLFFRVNARDDNMQDAANAL MAELATIDQHGFSAEELDDVKSTRLTWLKNAVDQQAERDLRMLTSRLASSSLNNTPFLSP EETYQLSKRLWQQITVQSLAEKWQQLRKNQDAFWEQMVNNELAAKKALSPAAILALEKEY ANKKLAAYIFPGRNLSLTVDADPQAEISSKETLAENLTSLTLSNGARVILAKSAGEEQKL QITAVSNKGDLSFPAQQKSLIALANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMN TLLSVSARTNNPEPGFQLINQRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMY ETRYADDRTKLLQENQIVQFTAADALAADRQLFSSPADITF Prediction of potential genes in microbial genomes Time: Sun May 15 22:57:03 2011 Seq name: gi|299857003|gb|ADWS01000061.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont60.1, whole genome shotgun sequence Length of sequence - 8691 bp Number of predicted genes - 8, with homology - 6 Number of transcription units - 1, operones - 1 average op.length - 8.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 9 - 48 -0.7 1 1 Op 1 . - CDS 119 - 676 250 ## EcE24377A_3131 hypothetical protein 2 1 Op 2 . - CDS 698 - 3211 2292 ## COG3501 Uncharacterized protein conserved in bacteria 3 1 Op 3 . - CDS 3265 - 3801 -34 ## 4 1 Op 4 . - CDS 3810 - 5759 930 ## Ctu_27040 hypothetical protein 5 1 Op 5 . - CDS 5800 - 6354 455 ## ECSE_4093 hypothetical protein 6 1 Op 6 . - CDS 6398 - 6997 254 ## ECA4143 hypothetical protein 7 1 Op 7 . - CDS 7048 - 7218 119 ## 8 1 Op 8 . - CDS 7221 - 8690 1138 ## COG3501 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|299857003|gb|ADWS01000061.1| GENE 1 119 - 676 250 185 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3131 NR:ns ## KEGG: EcE24377A_3131 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 159 1 159 200 263 100.0 2e-69 MADKSEKKKETTNKSAKKTLTKKSEKLTPAKDTAPKQVNVDPAIRLKQIRQLVRNNNKSI MGEDYIICQIYKESRFKQFAGKNKHNAKGLMQMQRNAVRQVFKYRQQKIKGRMTTDKETN EAFANADTFYKSDKIFDEKENIKIGTEYLQYWIDKEATIGNDSNLLIVFYVQIMPDDFVM QLHRF >gi|299857003|gb|ADWS01000061.1| GENE 2 698 - 3211 2292 837 aa, chain - ## HITS:1 COG:YPO0970_1 KEGG:ns NR:ns ## COG: YPO0970_1 COG3501 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 4 565 6 571 571 794 69.0 0 MVTPTLNFDHSHHKLKIRGLQSPVDVLTFEGREQLSTPFRYDIQFTSTDKAITPELVLMQ DGAFSLTAPPVQGMPVQTALRTLHGVITGFKHLSSSQDEARYEVRLEPRMALLARSRQNA IYQNQTVPQIVEKILRERHQMRGQDFVFNLKSEYPSREQVMQYGEDDLTFISRLLSEVGI WFRFATDARLKIEVVEFYDDQSGYERGLTLPLRHPSGLFDGETEAVWGLNTAYSVVEKSV TTRDYNYRTATAEMMTEQHDATGGDNTTYGEAYHYADNFLQKGDKEAAESGAFYARIRHE RYLNEQAILKGQSTSSLLIPGLEIRVQGDDAPAVFRKGVLITGVTASAARDRSYELTFTA IPYSERYGYRPALIPRPVMAGTLPARVTSTVKNDIYAHIDKDGRYRVNLDFDRDTWKPGY ESLWVRQSRPYAGDTYGLHLPLLAGTEVSIAFEEGNPDRPYIAGVKHDSAHTDHVTIQNY KRNVLRTPANNKIRLDDERGKEHIKVSTEYGGKSQLNLGHLVDAGKQQRGEGFELRTDMW GAVRAKKGIFISADAQDKAQGQVREMAPAMAILDGAQSQMQSLSTDAQTTNADPADLSSQ IALLQQSVKDLTQAVILLSAPKGVAIASGEHLQLAASKNVIANAGNNADIGVVKNMFIGV GQALSVFVRKAGIKLFANKGAVSVQAQNDLMELLAQKSIEITSTEDEIKITAKKKITLNG GGSYIRLDACGIEAGTPGEYNVKAGYYGRKPKAKLTPELMAFPVIKSEDFNQSFILLDEN TGQPLINWPYELELESGLKMSGITDENGNTELISSDKEEVVNISVFEPDEFLDDDIN >gi|299857003|gb|ADWS01000061.1| GENE 3 3265 - 3801 -34 178 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLYNKINLNDESEVFVILKTISRLFFFIIVAVYFLMFILSLDGGGRLSTLNILAAIGGN TFWCMLVVISLAGSAGICVYMLKKNCLTNSAVTILSTSFIFTTSIFIILFLKAEFVLDWL YCIYIEIFFNGDFYSGQERVLQTVPFMIRTYFLFLMANLFLFWLSFFFLIKNKTLHKA >gi|299857003|gb|ADWS01000061.1| GENE 4 3810 - 5759 930 649 aa, chain - ## HITS:1 COG:no KEGG:Ctu_27040 NR:ns ## KEGG: Ctu_27040 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 12 629 14 599 599 515 44.0 1e-144 MWGMLDTGGGIRAQLAEDNKVGNCGREWHVGFFFDGVGRNIDQDASEQRLSNVARLFRAY PDEDFNTDFVCHNKFYFSGMGTPYNEELISKLYTIMDQSLESMKEDLNDFAKETHEEISK EIRNRRGSWNETLKKIQDKLLDPKELRKKRNDIFKNMAKKSIIESTQWIRDNEIISAFFL TGEVTRINAAKVLFANAFVENSTNKKDSTAIKIKSISVSLYGYDTGAALARKFLDELLEE FCEKEGEDKYLFKKVPVNIVFAGFFDCSRHSPASNNNGLDYFLSLPGKITKNNKLKTAGK IAKVAFGEKAIELDTILPGTVKNALHLVAAYERRLWRSLYQLGSSNTEHKEILLPGCSED VGGGLKPDEQKPSAELCRVALQKMYEAAYDAGVPFPDFETLPSFSETVSRYFLMNEAVEG KSVKEWMKSYDMEVGQCQKETQSASESKVNDTDNKNDLPFDFYLDIYFKWLANQYYLYCT ELYQLDEKLSLAHRKQISGYGPLAGTGINPNPEADEINAQIAELKSHWGWLDDVRRVATG LSNDFNYGRPMDTRMLNHEDIFRPAWKRAELFLDYYHKAWNGEELTDISWLGIDTIHSYF THDLQTVDTGASINESFFLRRMAEYPKSKEKPEEKSEEQSPSPDLSGGD >gi|299857003|gb|ADWS01000061.1| GENE 5 5800 - 6354 455 184 aa, chain - ## HITS:1 COG:no KEGG:ECSE_4093 NR:ns ## KEGG: ECSE_4093 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 184 1 184 184 342 97.0 5e-93 MGLFTRLEKFDQKLTRGYARWGHWVWRMLIAVPVLVVLWNIGQAVWGGPRGGVILEIHSE IDRPILGFSVNGVAGANAFANGGGSTTCCGDVSGDTAEVIWTLDMTHEQYLKGMRLEKRN KTLPLPKREWGENYLHVHFMPGDKVLLGWSKDSFSPYEDLHNGGYKTRVRQDVKDKLYGT GKMN >gi|299857003|gb|ADWS01000061.1| GENE 6 6398 - 6997 254 199 aa, chain - ## HITS:1 COG:no KEGG:ECA4143 NR:ns ## KEGG: ECA4143 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 3 175 67 235 241 88 34.0 2e-16 MVLVGKLPVAGIVFSELPLEQLASRLAVGCMAKTPDGREVLLRYYTPRVLKQLAARPDME WHPVMFSQRESWWMLEDTRWQRLNMPFPAANNSDETVEIITLDEPLWQKIADRGDVSALL REWRTMKTSEHFPPCIQRNMVEKALNKAQAVGLTKPLDQKIYALSYLNGKKAYLESAEFQ AMLEKVKRNEISLSDLSRQ >gi|299857003|gb|ADWS01000061.1| GENE 7 7048 - 7218 119 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTSKQQLADHWLKRNETLNAFILFEGGALSQEMLQIIMEHYKYRRISLYQLPTLKR >gi|299857003|gb|ADWS01000061.1| GENE 8 7221 - 8690 1138 489 aa, chain - ## HITS:1 COG:YPO0970_1 KEGG:ns NR:ns ## COG: YPO0970_1 COG3501 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 262 310 571 571 409 74.0 1e-114 NEQAILKGQSTSSLLIPGLEIRVQGDDAPAVFRKGVLITGVTASAARDRSYELTFTAIPY SERYGYRPALIPRPVMAGTLPARVTSTVKNDIYAHIDKDGRYRVNLDFDRDTWKPGYESL WVRQSRPYAGDTYGLHLPLLAGTEVSIAFEEGNPDRPYIAGVKHDSAHTDHVTIQNYKRN VLRTPANNKIRLDDERGKEHIKVSTEYGGKSQLNLGHLVDAGKEQRGEGFELRTDLWGAV RAKKGIFISADAQDKAQGQVREMADIISELNGLSDKIQKLSDDATTANADPADVAAQIAL ITSRINDLTASVILMHAPKGVAVASGEHLQLAAVKNLQINAGNNADIGVVKNMFIGVGRA LSVFVRKAGIKLIANKGAVSVQAQHDLMELLAKKSIEIVSTEDEIRISAKKKITINGGGS YIRIEGSGIEPGTPGDYNVKAVHYGRQPKASEKVPMPEFPILSAVDSSDFCLECLLNAIK NDDAVVEGA Prediction of potential genes in microbial genomes Time: Sun May 15 22:57:34 2011 Seq name: gi|299857002|gb|ADWS01000062.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont61.1, whole genome shotgun sequence Length of sequence - 8012 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 2, operones - 1 average op.length - 7.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 - CDS 1 - 253 80 ## COG0534 Na+-driven multidrug efflux pump - Prom 465 - 524 80.1 + TRNA 447 - 522 87.1 # Asn GTT 0 0 - Term 524 - 552 0.6 2 1 Op 2 9/0.000 - CDS 560 - 1438 744 ## COG0583 Transcriptional regulator - Prom 1543 - 1602 4.0 3 1 Op 3 3/0.000 - CDS 1612 - 2529 397 ## COG0583 Transcriptional regulator + TRNA 2856 - 2931 87.1 # Asn GTT 0 0 - Term 2931 - 2960 2.1 4 1 Op 4 4/0.000 - CDS 2986 - 3918 510 ## COG1376 Uncharacterized protein conserved in bacteria 5 1 Op 5 11/0.000 - CDS 3983 - 5062 759 ## COG2038 NaMN:DMB phosphoribosyltransferase 6 1 Op 6 8/0.000 - CDS 5074 - 5817 799 ## COG0368 Cobalamin-5-phosphate synthase 7 1 Op 7 . - CDS 5814 - 6356 493 ## COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase - Prom 6453 - 6512 5.6 - Term 6598 - 6633 -0.5 8 2 Tu 1 . - CDS 6824 - 6988 70 ## EcSMS35_1129 hypothetical protein - Prom 7074 - 7133 4.0 Predicted protein(s) >gi|299857002|gb|ADWS01000062.1| GENE 1 1 - 253 80 84 aa, chain - ## HITS:1 COG:ECs2782 KEGG:ns NR:ns ## COG: ECs2782 COG0534 # Protein_GI_number: 15832036 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 84 63 146 430 159 97.0 2e-39 MNISSALRQVVHGTRWHAKRKSYKVLFWREITPLAVPIFMENACVLLMGVLSTFLVSWLG KDAMAGVGLADSFNMVIMAFFAAI >gi|299857002|gb|ADWS01000062.1| GENE 2 560 - 1438 744 292 aa, chain - ## HITS:1 COG:ECs2783 KEGG:ns NR:ns ## COG: ECs2783 COG0583 # Protein_GI_number: 15832037 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 292 25 316 316 564 98.0 1e-161 MLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLA DLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEAD IGIASERLSNDPQLVAFPWFRWHHSLLVPLDHPLTQITPLTLESIAKWPLITYRQGITGR SRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHL FDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKRQVMENSEEEIDYQI >gi|299857002|gb|ADWS01000062.1| GENE 3 1612 - 2529 397 305 aa, chain - ## HITS:1 COG:nac KEGG:ns NR:ns ## COG: nac COG0583 # Protein_GI_number: 16129930 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 305 1 305 305 535 99.0 1e-152 MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIRTKRGVTPTDA GKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTAASSITMPLLQAVRAEFPE IVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLKEDLFLVGTQDCPGQSVD VNAIAKMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGVAVLPE SAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANLSPQAQAVKELLMSVISSPVMEKRQ WQLVS >gi|299857002|gb|ADWS01000062.1| GENE 4 2986 - 3918 510 310 aa, chain - ## HITS:1 COG:erfK KEGG:ns NR:ns ## COG: erfK COG1376 # Protein_GI_number: 16129931 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 310 1 310 310 600 99.0 1e-171 MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQG LSNMLEANPGADVFLPKSGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVF PIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLY AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE PDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPV QISSGSRQMF >gi|299857002|gb|ADWS01000062.1| GENE 5 3983 - 5062 759 359 aa, chain - ## HITS:1 COG:ECs2786 KEGG:ns NR:ns ## COG: ECs2786 COG2038 # Protein_GI_number: 15832040 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 359 1 359 359 625 97.0 1e-179 MQTLADLLNTIPAIDPAAMSRAQRHIDGLLKPVGSLGRLEALAIQLAGMPGLNGIPHVGK KAVLVMCADHGVWEEGVAISPKEVTAIQAENMTRGTTGVCVLAAQAGANVHVIDVGIDTA EPIPGLINMRVARGSGNIASAPAMSRRQAVKLLLDVICYTRELAKNGVTLFGVGELGMAN TTPAAAIVSTITGRAPEEVVGIGANLPTDKLANKIDVVRRAITLNQPNPQDGVDVLAKVG GFDLVGMAGVMLGAASCGLPVLLDGFLSYAAALAACQMSPAIKPYLIPSHLSAEKGARIA LSHLGLEPYLNMEMRLGEGSGAALAMPIIEAACAIYNNMGELAASNIVLPGNTTSDLNS >gi|299857002|gb|ADWS01000062.1| GENE 6 5074 - 5817 799 247 aa, chain - ## HITS:1 COG:ECs2787 KEGG:ns NR:ns ## COG: ECs2787 COG0368 # Protein_GI_number: 15832041 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 413 98.0 1e-115 MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLLGAISGLVFMVLQAWCG VPLAALFSVLVLALMTGGFHLDGLADTCDGVFSARSRDRMLEIMRDSRLGTHGGLALIFV VLAKILVLSELALRGEPILASLAAACAVSRGTAALLMYRHRYAREEGLGNVFIGKIDGRQ TCVTLGLAAIFAAVLLPGMHGVATMVVTMVAIFILGQLLKRTLGGQTGDTLGAAIELGEL VFLLALL >gi|299857002|gb|ADWS01000062.1| GENE 7 5814 - 6356 493 180 aa, chain - ## HITS:1 COG:ECs2788 KEGG:ns NR:ns ## COG: ECs2788 COG2087 # Protein_GI_number: 15832042 # Func_class: H Coenzyme transport and metabolism # Function: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase # Organism: Escherichia coli O157:H7 # 1 180 2 181 181 347 97.0 5e-96 MILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARIEHHRQGRPAHWRTVERW QHLDELIHADINPHEAVLLECVTTMVTNLLFDYGGDKDSDEWDYQAMEQAINAEIQSLIA ACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLVVSGIGVKIK >gi|299857002|gb|ADWS01000062.1| GENE 8 6824 - 6988 70 54 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_1129 NR:ns ## KEGG: EcSMS35_1129 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 54 1 54 54 82 100.0 3e-15 MPLITHLLNVEELSRLLKNVALSVINLFILDDVSEKMEYIPDWVVVTRLNIWWR Prediction of potential genes in microbial genomes Time: Sun May 15 22:57:38 2011 Seq name: gi|299857001|gb|ADWS01000063.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont62.1, whole genome shotgun sequence Length of sequence - 7115 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 4, operones - 2 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 421 - 960 604 ## COG0629 Single-stranded DNA-binding protein 2 1 Op 2 . + CDS 1023 - 1256 169 ## pECS88_0051 hypothetical protein 3 1 Op 3 . + CDS 1322 - 3280 1570 ## COG1475 Predicted transcriptional regulators 4 1 Op 4 . + CDS 3335 - 3769 380 ## ECO111_p3-48 plasmid SOS inhibition protein B 5 1 Op 5 . + CDS 3766 - 4485 435 ## ECO111_p3-49 plasmid SOS inhibition protein A + Prom 4533 - 4592 2.5 6 2 Op 1 23/0.000 + CDS 4645 - 5166 168 ## COG2963 Transposase and inactivated derivatives 7 2 Op 2 . + CDS 5649 - 6014 177 ## COG2801 Transposase and inactivated derivatives + Term 6054 - 6087 0.7 8 3 Tu 1 . - CDS 5947 - 6168 116 ## APECO1_O1CoBM19 hypothetical protein 9 4 Tu 1 . + CDS 6154 - 6366 96 ## APECO1_O1CoBM20 modulator of post-segregation killing protein + Term 6381 - 6408 1.5 Predicted protein(s) >gi|299857001|gb|ADWS01000063.1| GENE 1 421 - 960 604 179 aa, chain + ## HITS:1 COG:BU545 KEGG:ns NR:ns ## COG: BU545 COG0629 # Protein_GI_number: 15617138 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Buchnera sp. APS # 1 113 1 114 171 173 71.0 1e-43 MAVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTEWHRVVL FGKLAEVAGEYLRKGAQVYIEGQLRTRSWEDNGITRYVTEILVKTTGTMQMLGRAAGAQT QPEEGQQFSGQPQPEPQSEAGTKKGGAKTKGRGRKAAQPEPQPQPPEGEDYGFSDDIPF >gi|299857001|gb|ADWS01000063.1| GENE 2 1023 - 1256 169 77 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0051 NR:ns ## KEGG: pECS88_0051 # Name: yubL # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 77 10 86 86 155 98.0 5e-37 MSEYFRILQGLPDGPFTRKHAEAVAAQYRNVFIEDDHGEQFRLVVRNNGAMVWRTWNFED GAGYWMNHVIRDFGILK >gi|299857001|gb|ADWS01000063.1| GENE 3 1322 - 3280 1570 652 aa, chain + ## HITS:1 COG:PSLT068 KEGG:ns NR:ns ## COG: PSLT068 COG1475 # Protein_GI_number: 17233437 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 651 1 655 665 840 66.0 0 MSVTESKAKTERKSSRKPAKTQETVLSALLAQTEEVSVPLASLIKSPLNVRTVPYSVESV SELAESIKGVGLLQNLVVHTLPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKVILQ ELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQTGDLLGYSPRHVQRMLKLADLA PVILDALAEDRITTEHCQALALENDTARQVQVFEAACQSGWGGKPDVRVIRNLITESEVA VAGNSKFRFVGADAFSPDELRTDLFSDDEGGYVDCVALDAALLEKLQAVAEFLREAEGWG WCAGRMEPVGECREDAGTYRCLPEPEAVLTEAEEERLNELMTRYDALENQCEESDLLEAE MKLMRCMAKVRAWTPEMRAGGGVVVSWRYGNVCVQRGVQLRSEDDVADDADRTEQVQEKA SVGGISLPLLTKMSSERTLAVQAALMQQPDKSLALLAWTLCLNVFGSGAYSKPAQISLEC KHYSLTSDAPSGKEGVAFMALMAEKARLAALLPEGWSRDMTTFLSLSQEVLLSLLSFCTA CSLNGVQTRECGHTSRSPLDSLETAIGFHMRDWWQPTKANFFGHLKKPQIIAALNEAGLS GAARDAEKMKKGDAAEHAEHHMKDNCWVPGWMCAPHPQTDTTERTDNLADAA >gi|299857001|gb|ADWS01000063.1| GENE 4 3335 - 3769 380 144 aa, chain + ## HITS:1 COG:no KEGG:ECO111_p3-48 NR:ns ## KEGG: ECO111_p3-48 # Name: psiB # Def: plasmid SOS inhibition protein B # Organism: E.coli_O111_H- # Pathway: not_defined # 1 144 1 144 144 283 98.0 2e-75 MKTELTLNVLQTMSAQEYEDIRAAGSDERRELTHAVMRELDAPDNWMMNGEYGSEFGGFF PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALA ASLDAQGYSVSDIIHILMAEGGQA >gi|299857001|gb|ADWS01000063.1| GENE 5 3766 - 4485 435 239 aa, chain + ## HITS:1 COG:no KEGG:ECO111_p3-49 NR:ns ## KEGG: ECO111_p3-49 # Name: not_defined # Def: plasmid SOS inhibition protein A # Organism: E.coli_O111_H- # Pathway: not_defined # 1 239 1 239 239 415 98.0 1e-115 MSARSQALVPLSTEQQAAWRAVAETEKRRHQGNTLAEYPYAGAFFRCLNGSRRISLSDLR FFMPSLTAEELHGNRLQWLYAIDVLIETQGEVCLLPLPGDAAERLFPSVRFRVRERSRHK SALVMQKYSRQQAREAEQKARAYQALVAQAEIELAFHSPETVGSWHARWSDRVAEHDLET LFWQWGERFPSLAGMERWQWQDMPFWQVIAEAGMAARVVGHAVREMERWMVPNKLREAA >gi|299857001|gb|ADWS01000063.1| GENE 6 4645 - 5166 168 173 aa, chain + ## HITS:1 COG:yi5A KEGG:ns NR:ns ## COG: yi5A COG2963 # Protein_GI_number: 16131428 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 173 1 173 173 321 100.0 3e-88 MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKG VSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTK RNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK >gi|299857001|gb|ADWS01000063.1| GENE 7 5649 - 6014 177 121 aa, chain + ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 121 163 283 283 246 100.0 9e-66 MNMVENMLDQAFKKLNPHEHPVLHSDQGWQYRMRRYQNILKEHGIKQSMSRKGNCLDNAV VECFFGTLKSECFYLDEFSNISELKDAVTEYIEYYNSRRISLKLKGLTPIEYRNQTYMPR V >gi|299857001|gb|ADWS01000063.1| GENE 8 5947 - 6168 116 73 aa, chain - ## HITS:1 COG:no KEGG:APECO1_O1CoBM19 NR:ns ## KEGG: APECO1_O1CoBM19 # Name: sok # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 43 1 43 74 85 100.0 7e-16 MWTRHRDASWWLMKINLLRGYLLSATQHGNKPPSRHEAESLKRVLTPKSWTVKHEAYRSD SDIQLESDLLISG >gi|299857001|gb|ADWS01000063.1| GENE 9 6154 - 6366 96 70 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM20 NR:ns ## KEGG: APECO1_O1CoBM20 # Name: mok # Def: modulator of post-segregation killing protein # Organism: E.coli_APEC # Pathway: not_defined # 1 70 1 70 70 133 100.0 2e-30 MSSPHQDSLLPRFAQGEEGHETTTKFPCLVCVDRVSHTVDIHLSDTKIAVRDSLQRRTQG GGGFHGLRIR Prediction of potential genes in microbial genomes Time: Sun May 15 22:57:51 2011 Seq name: gi|299857000|gb|ADWS01000064.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont63.1, whole genome shotgun sequence Length of sequence - 7097 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 4, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 83 - 2458 1710 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 2 1 Op 2 . + CDS 2478 - 3224 559 ## p1ECUMN_0077 F pilin acetylase 3 1 Op 3 . + CDS 3279 - 3839 466 ## p1ECUMN_0075 conjugal transfer fertility inhibition protein FinO + Prom 4788 - 4847 1.9 4 2 Tu 1 . + CDS 4999 - 5187 81 ## APECO1_O1CoBM63 hypothetical protein + Term 5372 - 5420 0.6 + Prom 5292 - 5351 4.0 5 3 Tu 1 . + CDS 5484 - 5738 171 ## ROD_p1001 negative regulator of repA1 expression + Prom 5919 - 5978 3.0 6 4 Tu 1 . + CDS 6144 - 6899 681 ## EcE24377A_C0025 replication protein Predicted protein(s) >gi|299857000|gb|ADWS01000064.1| GENE 1 83 - 2458 1710 791 aa, chain + ## HITS:1 COG:PSLT108 KEGG:ns NR:ns ## COG: PSLT108 COG0507 # Protein_GI_number: 17233470 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Salmonella typhimurium LT2 # 1 791 965 1752 1752 1241 86.0 0 METLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPASERPRVVGLGP THRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLIN RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDIP MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGKEQVMVPVLN TANIRDGELRRLSTWENNPDALALVDSVYHRIAGISKDDGLITLEDAEGNTRLISPREAV AEGVTLYTPDKIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTRVIRP GQERAEQHIDLAYAITAHGAQGTSETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV YTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAQRLFSTARELRDVAAGRAVLRQAG LAGGDSPARFIAPGRKYPQPYVALPAFDRNGRSAGIWLNPLTTDDGNGLRGFSGEGRVKG RGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVW GDIPDSSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTE LAVRDIAGQERDRTASSERETALPESVLRESQREREAVREVARENLLQERLQQMERDMVR DLQKEKTLGGD >gi|299857000|gb|ADWS01000064.1| GENE 2 2478 - 3224 559 248 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0077 NR:ns ## KEGG: p1ECUMN_0077 # Name: traX # Def: F pilin acetylase # Organism: E.coli_UMN026 # Pathway: not_defined # 13 248 170 405 405 434 98.0 1e-120 MTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLMVLDHINLIFQLKQEWM FLAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQFAYYLAGFPWYEGNILFAF AVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAGLLMLAVSHRLYRAEDRAERL ALVACLLAVIPALNLATSDAAAVAGLVMTVLTVGLVSCAGKSLPRFWPGDFFPVFYACHL AVLGVLAL >gi|299857000|gb|ADWS01000064.1| GENE 3 3279 - 3839 466 186 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0075 NR:ns ## KEGG: p1ECUMN_0075 # Name: finO # Def: conjugal transfer fertility inhibition protein FinO # Organism: E.coli_UMN026 # Pathway: not_defined # 1 186 1 186 186 313 96.0 2e-84 MTEQKRPVLTLKRKTEGETPVRSRKTIINVTTPPKWKVKKQKLAEKAAREAELAAKKAQA RQALSIYLNLPTLDEAVNTLKPWWPGLFDGDTPRLLACGIRDVLLEDVAQRNIPLSHKKL RRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEAYAAARLDKIRRQNRIKAELQ AVLDEK >gi|299857000|gb|ADWS01000064.1| GENE 4 4999 - 5187 81 62 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM63 NR:ns ## KEGG: APECO1_O1CoBM63 # Name: srnB # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 2 62 38 98 103 102 88.0 5e-21 MHFSTTDCSLFFAKMSKFMTKYTLIGLLAVCATVLCFSLIFREQLCELNIHRGNTVVQVT LA >gi|299857000|gb|ADWS01000064.1| GENE 5 5484 - 5738 171 84 aa, chain + ## HITS:1 COG:no KEGG:ROD_p1001 NR:ns ## KEGG: ROD_p1001 # Name: repA2 # Def: negative regulator of repA1 expression # Organism: C.rodentium # Pathway: not_defined # 1 84 1 84 84 125 97.0 4e-28 MSQTENTVTSSSGAKRAYRKGNPLSDAEKQRLSVARKRASFKEVKVFLEPKYKAMLMQMC NEDGLTQAEVLTALIKSEAQKRCM >gi|299857000|gb|ADWS01000064.1| GENE 6 6144 - 6899 681 251 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_C0025 NR:ns ## KEGG: EcE24377A_C0025 # Name: repA # Def: replication protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 251 35 285 285 423 97.0 1e-117 MEKAVGFSSRFDFAIHVAHARSRGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSI TTLAIECGLATESGAGKLSITRATRALTFLSELGLITYQTEYDPLIGCYIPTDITFTLAL FAALDVSEDAVAAARRSRVVWENKQRKKQGLDTLGMDELIAKAWRFVRERFRSYQTELKS RGIKRARARRDANRKRQDIVTLVKRQLTREISEGRFTANREAVKREVERRVKERMILSRN RNYSRLATASP Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:06 2011 Seq name: gi|299856999|gb|ADWS01000065.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont64.1, whole genome shotgun sequence Length of sequence - 5569 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 111 - 141 3.0 1 1 Op 1 3/0.000 - CDS 380 - 1465 1269 ## COG2055 Malate/L-lactate dehydrogenases - Prom 1498 - 1557 2.3 - Term 1560 - 1593 3.0 2 1 Op 2 4/0.000 - CDS 1606 - 2568 981 ## COG0547 Anthranilate phosphoribosyltransferase 3 1 Op 3 . - CDS 2596 - 4746 1952 ## COG1199 Rad3-related DNA helicases - Prom 4773 - 4832 2.5 + Prom 4719 - 4778 2.6 4 2 Tu 1 . + CDS 4899 - 5348 422 ## COG3236 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|299856999|gb|ADWS01000065.1| GENE 1 380 - 1465 1269 361 aa, chain - ## HITS:1 COG:ybiC KEGG:ns NR:ns ## COG: ybiC COG2055 # Protein_GI_number: 16128769 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 1 361 1 361 361 726 99.0 0 MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAGHDSHGIGMIPSYVRSW SQGHLQINHHAKTVKESGAAVTLDGDRAFGQVAAHEAMALGIEKAHKHGIAAVALHNSHH IGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRFGTNPFCVVFPRKDNFPLLLD YATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAVMQESPLGALLTFAEHKGYALA AMCEILGGALSGGKTTHQETLQTSPDAILNCMTTIIINPELFGAPDCNAQTEAFAEWVKA SPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIGMPEETLQAFCQQLA S >gi|299856999|gb|ADWS01000065.1| GENE 2 1606 - 2568 981 320 aa, chain - ## HITS:1 COG:ybiB KEGG:ns NR:ns ## COG: ybiB COG0547 # Protein_GI_number: 16128768 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 320 1 320 320 640 99.0 0 MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEML GFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSED PTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNS AHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCP QINLIDREGMRVLYEKQDPAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCL VATGEAATISDGLARVNQAF >gi|299856999|gb|ADWS01000065.1| GENE 3 2596 - 4746 1952 716 aa, chain - ## HITS:1 COG:ECs0877 KEGG:ns NR:ns ## COG: ECs0877 COG1199 # Protein_GI_number: 15830131 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Escherichia coli O157:H7 # 1 716 1 716 716 1433 99.0 0 MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGK TLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVC PRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAID DDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDP KNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAI PERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLR GLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWA TREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHCEQGKIVIPRMRFEPSIDNEEQHIAEMAAFFREQVESKKHLGMLVL FASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGEHSVLVGLQSFAEGLDL KGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRS HGCWGEVVIYDKRLLTKNYGKRLLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR >gi|299856999|gb|ADWS01000065.1| GENE 4 4899 - 5348 422 149 aa, chain + ## HITS:1 COG:ybiA KEGG:ns NR:ns ## COG: ybiA COG3236 # Protein_GI_number: 16128766 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 149 12 160 160 286 98.0 8e-78 MQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSSP MVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHPELRALLLATAPAKLVEHTENDA YWGDGGNGKGKNRLGYLLMELREQLAIEK Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:09 2011 Seq name: gi|299856998|gb|ADWS01000066.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont65.1, whole genome shotgun sequence Length of sequence - 5475 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 6, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 430 239 ## COG2203 FOG: GAF domain - Prom 529 - 588 4.9 + Prom 529 - 588 3.9 2 2 Tu 1 . + CDS 613 - 867 166 ## COG3042 Putative hemolysin + Term 895 - 951 0.6 3 3 Op 1 3/0.500 - CDS 889 - 1236 417 ## COG3189 Uncharacterized conserved protein 4 3 Op 2 . - CDS 1291 - 2472 602 ## COG2807 Cyanate permease - Prom 2495 - 2554 3.4 + Prom 2836 - 2895 1.7 5 4 Tu 1 . + CDS 2956 - 3390 307 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 3295 - 3328 2.0 6 5 Tu 1 . - CDS 3347 - 3793 607 ## COG2707 Predicted membrane protein - Prom 3893 - 3952 3.1 - Term 3896 - 3943 4.2 7 6 Op 1 2/1.000 - CDS 4068 - 4571 511 ## COG2606 Uncharacterized conserved protein 8 6 Op 2 . - CDS 4614 - 5447 638 ## COG2199 FOG: GGDEF domain Predicted protein(s) >gi|299856998|gb|ADWS01000066.1| GENE 1 1 - 430 239 143 aa, chain - ## HITS:1 COG:ECs2503_1 KEGG:ns NR:ns ## COG: ECs2503_1 COG2203 # Protein_GI_number: 15831757 # Func_class: T Signal transduction mechanisms # Function: FOG: GAF domain # Organism: Escherichia coli O157:H7 # 1 143 1 143 163 283 99.0 9e-77 MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKVDVEARLQHIMFARNSQ KMHIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAARNLGITTFLSTPIHLPDGS FYGTLCAASSEKRQWSERAEQVL >gi|299856998|gb|ADWS01000066.1| GENE 2 613 - 867 166 84 aa, chain + ## HITS:1 COG:yoaF KEGG:ns NR:ns ## COG: yoaF COG3042 # Protein_GI_number: 16129747 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Escherichia coli K12 # 1 84 1 84 84 154 100.0 3e-38 MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQKGGTLIPVQTAQGVSNN CKLPGGETIDEWALWRRDHPAGEK >gi|299856998|gb|ADWS01000066.1| GENE 3 889 - 1236 417 115 aa, chain - ## HITS:1 COG:ECs2501 KEGG:ns NR:ns ## COG: ECs2501 COG3189 # Protein_GI_number: 15831755 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 115 8 122 122 222 99.0 2e-58 MNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEITPSTELRKAFHGEVVD FATFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQNHALVLADWLRSL >gi|299856998|gb|ADWS01000066.1| GENE 4 1291 - 2472 602 393 aa, chain - ## HITS:1 COG:ECs2500 KEGG:ns NR:ns ## COG: ECs2500 COG2807 # Protein_GI_number: 15831754 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 639 99.0 0 MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLL AFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNV LLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLALNGFGWQGALFMLMCFPLMA LFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILIS RGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAH AITWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHD ANGDWSVPLMGVAILSLLMAIFGLCAGRDKEIR >gi|299856998|gb|ADWS01000066.1| GENE 5 2956 - 3390 307 144 aa, chain + ## HITS:1 COG:yeaM KEGG:ns NR:ns ## COG: yeaM COG2207 # Protein_GI_number: 16129744 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 144 130 273 273 250 97.0 5e-67 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGSLGQWAGFFAMSER NLARLIVKETGLSFRQWHQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG QTPGRYIAGLTTVSPQSAKPDPRQ >gi|299856998|gb|ADWS01000066.1| GENE 6 3347 - 3793 607 148 aa, chain - ## HITS:1 COG:yeaL KEGG:ns NR:ns ## COG: yeaL COG2707 # Protein_GI_number: 16129743 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 148 1 148 148 188 100.0 3e-48 MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFPWIEKQGLSIGIIILTI GVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRGVTLMGSQPQLVAGLLVGT VLGVALFRGVPVGPLIAAGLVSLIVGKQ >gi|299856998|gb|ADWS01000066.1| GENE 7 4068 - 4571 511 167 aa, chain - ## HITS:1 COG:ECs2496 KEGG:ns NR:ns ## COG: ECs2496 COG2606 # Protein_GI_number: 15831750 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 317 98.0 6e-87 MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK LVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPELLNFRRTA >gi|299856998|gb|ADWS01000066.1| GENE 8 4614 - 5447 638 277 aa, chain - ## HITS:1 COG:yeaJ_2 KEGG:ns NR:ns ## COG: yeaJ_2 COG2199 # Protein_GI_number: 16129740 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 112 277 1 166 166 324 100.0 1e-88 MSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQS EDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQN VSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGD LAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEI GFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:11 2011 Seq name: gi|299856997|gb|ADWS01000067.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont66.1, whole genome shotgun sequence Length of sequence - 3916 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 2, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 152 - 187 2.0 1 1 Op 1 . - CDS 190 - 552 291 ## COG1087 UDP-glucose 4-epimerase 2 1 Op 2 . - CDS 568 - 1389 707 ## COG1210 UDP-glucose pyrophosphorylase + Prom 1380 - 1439 4.4 3 2 Op 1 . + CDS 1463 - 2167 375 ## COG3316 Transposase and inactivated derivatives 4 2 Op 2 . + CDS 2229 - 2936 372 ## S2721 putative DNA helicase 5 2 Op 3 . + CDS 2923 - 3894 460 ## ECO111_p1-125 replication protein C Predicted protein(s) >gi|299856997|gb|ADWS01000067.1| GENE 1 190 - 552 291 120 aa, chain - ## HITS:1 COG:HI0351 KEGG:ns NR:ns ## COG: HI0351 COG1087 # Protein_GI_number: 16272302 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Haemophilus influenzae # 1 115 1 115 338 164 67.0 4e-41 MAILVTGGAGYIGSHTVLALLARGDEVVVLDNFVNASPQALARVEQICGRQPQLYRGDVR DRALLRQIFALHHISDVIHFAGLKAVGESVEKPLAYYDNNVSGTLVLLDEMRQAGGHCCK >gi|299856997|gb|ADWS01000067.1| GENE 2 568 - 1389 707 273 aa, chain - ## HITS:1 COG:YPO1540 KEGG:ns NR:ns ## COG: YPO1540 COG1210 # Protein_GI_number: 16121813 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Yersinia pestis # 1 268 28 295 297 341 62.0 1e-93 MLPIVDKPLIQKVVHECVQAGVKEIILVTHSSKNAIENHFDTSFELEALLEARVKRQLLD EVRSICPPGVTINSVRQHKPLGLGHAILCARPLVGEHPFIVALPDIWLDTSTFDPATQNL GAMVKRFEESGRSQVLVQPMPLEVLPEYSVINCADAVLAPGQSARMTSIVEKPEDAEKYQ SDLSAVGRYVLSAAIWPILAATGFGAWERIQLSDAIATLLQHRPVEAYRQVGHSYDCGEK LGYAEAFVAGGLSHPQQGEAFRAWLRDLQQRID >gi|299856997|gb|ADWS01000067.1| GENE 3 1463 - 2167 375 234 aa, chain + ## HITS:1 COG:Cgl0933 KEGG:ns NR:ns ## COG: Cgl0933 COG3316 # Protein_GI_number: 19552183 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 233 1 234 236 273 57.0 2e-73 MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEK RLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYISSRRNSKAAYRFLG KILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLK RIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM >gi|299856997|gb|ADWS01000067.1| GENE 4 2229 - 2936 372 235 aa, chain + ## HITS:1 COG:no KEGG:S2721 NR:ns ## KEGG: S2721 # Name: not_defined # Def: putative DNA helicase # Organism: S.flexneri_2457T # Pathway: not_defined # 1 235 41 275 275 390 85.0 1e-107 MLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGAHLSAEERQAVAD GLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRME AIAADTGCSIVFLHHASKGAAMMGAGDQQQASRGSSVLVDNIRWQSYLSSMTSAEAEEWG VDDDQRRFFVRFGVSKANYGAPFADRWFRRHDGGVLKPAVLERQRKSKGVPRGEA >gi|299856997|gb|ADWS01000067.1| GENE 5 2923 - 3894 460 323 aa, chain + ## HITS:1 COG:no KEGG:ECO111_p1-125 NR:ns ## KEGG: ECO111_p1-125 # Name: not_defined # Def: replication protein C # Organism: E.coli_O111_H- # Pathway: not_defined # 1 283 1 283 283 572 100.0 1e-162 MVKPKNKHSLSHVRHDPAHCLAPGLFRALKRGERKRSKLDVTYDYGDGKRIEFSGPEPLG ADDLRILQGLVAMAGPNGLVLGPEPKTEGGRQLRLFLEPKWEAVTADAMVVKGSYRALAK EIGAEVDSGGALKHIQDCIERLWKVSIIAQNGRKRQGFRLLSEYASDEADGRLYVALNPL IAQAVMGGGQHVRISMDEVRALDSETARLLHQRLCGWIDPGKTGKASIDTLCGYVWPSEA SGSTMRKRRQRVREALPELVALGWTVTEFAAGKYDITRPKAAGCPPPLYCKQDIFIFYIQ WLIFLLIGNTMKNTMLRKGLTIF Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:21 2011 Seq name: gi|299856996|gb|ADWS01000068.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont67.1, whole genome shotgun sequence Length of sequence - 3507 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 2826 2023 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 2 1 Op 2 . - CDS 2826 - 3506 641 ## COG3505 Type IV secretory pathway, VirD4 components Predicted protein(s) >gi|299856996|gb|ADWS01000068.1| GENE 1 3 - 2826 2023 941 aa, chain - ## HITS:1 COG:PSLT108 KEGG:ns NR:ns ## COG: PSLT108 COG0507 # Protein_GI_number: 17233470 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Salmonella typhimurium LT2 # 1 941 1 940 1752 1533 87.0 0 MLSFSVVKSAGSAGNYYTDKDNYYVLGSMGERWAGQGAEQLGLQGSVDKDVFTRLLEGRL PDGADLSRMQDGSNKHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQDPQLHTHVVVANVTQHNGEWKTLSSDKV GKTGFSENVLANRIAFGKIYQSELRQRVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQA IREAVGEDASLKSRDVAALDTRKSKQHVDPEVRMAEWMQTLKETGFDIRAYRDAADQRAE IRTQAPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNLKQDE RLSGELITGRRQLLEGMAFPPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ VSGVREQAILTEAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVADSPFTALKLENGWVETPGH SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDEPRTAEKLARHPSFTVVSDQI KARAGETLLETAISLQKAGLHTPAQQAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTG FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEARK >gi|299856996|gb|ADWS01000068.1| GENE 2 2826 - 3506 641 226 aa, chain - ## HITS:1 COG:PSLT104_1 KEGG:ns NR:ns ## COG: PSLT104_1 COG3505 # Protein_GI_number: 17233468 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Salmonella typhimurium LT2 # 1 97 513 609 616 174 85.0 8e-44 ADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQARPKVAPEF IPRDINPEMENRLSAVLAAREAEGRQMASLFEPEVASGEGVTQAEQPQQPQQPQQPQQPQ QPQQPQQPQQPQQPVSSVINDKKSDAGVSVPAGGIEQELKMKPEEEMEQQLPPGISESGE VVDMAAYEAWQQENHPDIQQQMQRREEVNINVHRERGEDVEPGDDF Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:22 2011 Seq name: gi|299856995|gb|ADWS01000069.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont68.1, whole genome shotgun sequence Length of sequence - 3310 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 417 - 626 163 ## ECIAI1_1456 hypothetical protein - Prom 672 - 731 4.5 - Term 775 - 816 -0.4 2 2 Tu 1 . - CDS 823 - 3270 1385 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856995|gb|ADWS01000069.1| GENE 1 417 - 626 163 69 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_1456 NR:ns ## KEGG: ECIAI1_1456 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 69 75 143 143 119 100.0 3e-26 MNEAKEKDLGTYKKSTLKTEKITRGLFSNDEITLIYFSEYSKRIVQEVFVFNVEDKKVKL KGYRYDSIN >gi|299856995|gb|ADWS01000069.1| GENE 2 823 - 3270 1385 815 aa, chain - ## HITS:1 COG:ECs2061 KEGG:ns NR:ns ## COG: ECs2061 COG3209 # Protein_GI_number: 15831315 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 815 591 1400 1400 1497 93.0 0 MKDAQGRETQYEYNAAGDLTAVITPDGNRSETQYDAWGKAVSTTQGGLTRSMEYDAAGRV ISLTNENGSHSDFSYDALDRLVQQGGFDGRTQRYHYDLTGKLTQSEDEGLVTLWYYDESD RITHRTVNGEPAEQWQYDDHGWLTDISHLSEGHRVAVHYGYDDKGRLTGERQTVENPETG ELLWQHETTHAYNEQGLANRVTPDSLPPVEWLTYGSGYLAGMKLGDTPLLEYTRDRMHRE TVRSFGSMAGSNAAYKLTSTYTPAGQLQSQHLNSLVYDRDYGWNDNGDLVRISGPRQTRE YGYSATGRLESVRTLAPDLDIRIPYATDPAGNRLPDPELHPDSTLTAWPDNRIAEDAHYV YHYDEYGRLTEKTDLIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDP LGRRMAKRVWRRERDLTGWMSLSRKPEMTWYGWDGDRLTTVQTDTTRIQTVYQPGSFAPL IRIETDNGEREKAQRRSLAEKLQQEGSEDGHGVVFPAELVRLLDRLEEEIRADRVSSESR AWLAQCGLTVEQLARQVEPEYTPARKVHFYHCDHRGLPLALISEDGNTAWRGEYDEWGNQ LNEENPYYLHQPYRLPGQQHDEESGLYYNRNRYYDPLQGRYITQDPIGLAGGWNLYNYPL NPIIRMDPLGLYNLYQLLYDVWHDDSYGTSSIDITGSGDLISLGGHAGLGVAFAKKKGEM LSDICIYATACGHAGIGGGINAAITYSETKSLPTSGVSNSVGVTVGGGVGGHFAYTYVVD VDNPESSTESVGIGAGVDASVMTLACRTWQECWVN Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:25 2011 Seq name: gi|299856994|gb|ADWS01000070.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont69.1, whole genome shotgun sequence Length of sequence - 3171 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 3/0.000 - CDS 3 - 1395 751 ## COG3209 Rhs family protein 2 1 Op 2 . - CDS 1463 - 3094 1115 ## COG3501 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|299856994|gb|ADWS01000070.1| GENE 1 3 - 1395 751 464 aa, chain - ## HITS:1 COG:ECs0560 KEGG:ns NR:ns ## COG: ECs0560 COG3209 # Protein_GI_number: 15829814 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 464 1 467 1398 879 96.0 0 MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGMTSGNPVNPLLGAKVLPG ETDLALPGPLPFILSRTYSSYRTKTPAPVGVFGPGWKAPSDIRLQLRDDGLILNDNGGRS IHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWGALPPDIRLSPHLYLATNSAQ GPWWILGWSERVPGAEDVLPAPLPPYRELTGLADRFGRTLTYRREAAGDLTGEITGVTDG AGREFRLVLTTQAQRAEEARTSSLSSSDSSRPLSASAFPDTLPGTEYGPDRGIRLSAVWL MHDPAYPESLPAAPLVRYTYTEAGELLAVYDRSNTQVRAFTYDAQHPGRMVAHRYAGRPE MRYRYDDAGRVVEQLNPAGLSYRYQYEQDRITVTDSLNRREVLHTEGGAGLKRVVKKELA DGSVTHSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPD >gi|299856994|gb|ADWS01000070.1| GENE 2 1463 - 3094 1115 543 aa, chain - ## HITS:1 COG:ZvgrE KEGG:ns NR:ns ## COG: ZvgrE COG3501 # Protein_GI_number: 15801686 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 543 172 714 714 1101 97.0 0 MAAEEGIFFYEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQ IRPSSVVTKDYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDG WRNNAEVARGTSRSPEIWPGRRIALTGHPQANLNREWQVVASDLHGEQPQAVPGRRGSGT TLDNHFAVIPADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNP SNQDSSCWIRVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHHENRTPGS LPGTKTQMTIRSKTYKGSGFNELKFDDATGKEQVYIHAQKNMNTEVLNNRTTDVINNHAE TIGNNQMIAVTNNQIQTVGVNQIETVGSNQIIKVGSVQVETIGLVRALTVGVTYQTTVGG IMNTSVALMQSSQIGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQTAIYSAGEHLEL CCGKARLVLTKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDM REY Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:26 2011 Seq name: gi|299856993|gb|ADWS01000071.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont70.1, whole genome shotgun sequence Length of sequence - 3020 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 90 - 133 -0.9 1 1 Tu 1 . - CDS 218 - 1456 1510 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Prom 1659 - 1718 5.0 2 2 Tu 1 . + CDS 1792 - 2994 1545 ## COG1972 Nucleoside permease Predicted protein(s) >gi|299856993|gb|ADWS01000071.1| GENE 1 218 - 1456 1510 412 aa, chain - ## HITS:1 COG:ECs3271 KEGG:ns NR:ns ## COG: ECs3271 COG1914 # Protein_GI_number: 15832525 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Escherichia coli O157:H7 # 1 412 1 412 412 697 100.0 0 MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWAN LMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGF KLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGLLLFVAAAYIVELIFSQPNLA QLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSSLTQHLHGGSRQQRYSATKWDVA IAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATVFGLSLVAAGL SSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLPSFIVILMGLDPTRILVMSQVLLSFGI ALALVPLLIFTSDSKLMGDLVNSKRVKQTGWVIVVLVVALNIWLLVGTALGL >gi|299856993|gb|ADWS01000071.1| GENE 2 1792 - 2994 1545 400 aa, chain + ## HITS:1 COG:nupC KEGG:ns NR:ns ## COG: nupC COG1972 # Protein_GI_number: 16130325 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli K12 # 1 400 1 400 400 653 100.0 0 MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLAWFFLNSDVGLGFVKGF SEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFISALIGILQHIRVLPVIIRA IGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKISRNRMYTMAATAMSTVSMS IVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVDASEENIQMSNLHEGQSFFEMLG EYILAGFKVAIIVAAMLIGFIALIAALNALFATVTGWFGYSISFQGILGYIFYPIAWVMG VPSSEALQVGSIMATKLVSNEFVAMMDLQKIASTLSPRAEGIISVFLVSFANFSSIGIIA GAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLSASIAALVL Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:28 2011 Seq name: gi|299856992|gb|ADWS01000072.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont71.1, whole genome shotgun sequence Length of sequence - 2807 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 128 71 ## COG2963 Transposase and inactivated derivatives - Prom 299 - 358 1.7 + Prom 79 - 138 2.3 2 2 Tu 1 . + CDS 182 - 2614 1078 ## SNSL254_p_0082 hypothetical protein + Term 2755 - 2792 -0.1 3 3 Tu 1 . - CDS 2648 - 2806 104 ## AB57_0287 transposase S26 Predicted protein(s) >gi|299856992|gb|ADWS01000072.1| GENE 1 2 - 128 71 42 aa, chain - ## HITS:1 COG:ECs1393 KEGG:ns NR:ns ## COG: ECs1393 COG2963 # Protein_GI_number: 15830647 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 42 1 42 141 75 88.0 2e-14 MELQDWRKEPRKNYSNEFKLRMVELASQPGACVAQIARENGV >gi|299856992|gb|ADWS01000072.1| GENE 2 182 - 2614 1078 810 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_p_0082 NR:ns ## KEGG: SNSL254_p_0082 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 2 806 109 921 1828 1589 98.0 0 MATYGGQFTLTSTVQTDEYPLTVDVTPPTYSSLAPVYSNYGQVTSGDVWKLGLGGSEDNA FLLSGISDESPIKGVKAKLYRQDGSLYKDVSVNYDDANGQARQSFQSGFFPASDLDEVFT LQFEISDSAGNSYLSPRQKVMFDSITNAPSAPFGVYDPSSTNNLGPGLTGFVAYTEGMTV KTNPIKLAWRVPRDNWHEYREGGINMTNALGEMSKVGEDASYVYLVTTAPYGNTDGNYWR WVNFGQWGGGGIAYNLTLSPSAPKSPRLLGVDYNYSDIGWSSFYRYWVNNSVLPVTVSSI RVKVEPRPYVQTAVHRGSCEIPVGQDSCVIANSFTMAKGTTGYVHDNATVFNPDKSLRSN PLWAEVNWNDQHYPQLSQQFDQNSKVFTLFVNQPGRGAYFDRLRLRSAWIEDSKGNKLSP TGGLIANNWENYTYQWDLKTLPEGQYSLVAAAEEMHGPLTRQPMFQITSDRTPPTMTLSV ADGAAIQTLDDVVITLADAIDPSPKLTSIALVGGPANDKVQLSWREESKGRFRLEYPVMF PSLKEGESYTLTVSGEDAQGNAVQKAVGFEYKPRQVMLADGMDGKVMVPAVTHEFVHADG KRIIETKPLTLSDGAVVTGSYDVFATLRSDAKVPLVVNGVRIEPGQTMGIMSQHDFGASG GRLSIPVKPAVPDVVGSSSLLVMTSAPNSPILVVDINTWKGTAKLSAESWTIRQVIDPVK IYALPESGVPCRFTTKEDVAMAADPIRDPVCLLQWDRTPDEAEQTTQDNNGMKVAGLVGQ AVSIGEQPVEYSLYLFSGDGSKVKVALLQS >gi|299856992|gb|ADWS01000072.1| GENE 3 2648 - 2806 104 52 aa, chain - ## HITS:1 COG:no KEGG:AB57_0287 NR:ns ## KEGG: AB57_0287 # Name: not_defined # Def: transposase S26 # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 52 183 234 234 107 100.0 2e-22 INATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:38 2011 Seq name: gi|299856991|gb|ADWS01000073.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont72.1, whole genome shotgun sequence Length of sequence - 2687 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 215 - 598 97 ## ECO103_3370 hypothetical protein - Prom 807 - 866 5.2 2 2 Tu 1 . - CDS 1133 - 1339 125 ## COG2801 Transposase and inactivated derivatives - Prom 1547 - 1606 6.3 3 3 Op 1 . - CDS 2227 - 2436 199 ## COG1662 Transposase and inactivated derivatives, IS1 family 4 3 Op 2 . - CDS 2437 - 2622 57 ## COG1662 Transposase and inactivated derivatives, IS1 family Predicted protein(s) >gi|299856991|gb|ADWS01000073.1| GENE 1 215 - 598 97 127 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3370 NR:ns ## KEGG: ECO103_3370 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 127 338 464 474 259 100.0 2e-68 MRTFSLISSLDPDFQASVSLSGFEKIYYNYGDSYKDIQDELQALLDANNRYKWDSAHEMG HKVLDEYGEGSSPDYSWTHKGTSTLMQKTIPGNVMPAQGEIDVMKYGKYRPDMYTRLVAA DEDVQGL >gi|299856991|gb|ADWS01000073.1| GENE 2 1133 - 1339 125 68 aa, chain - ## HITS:1 COG:Z5089 KEGG:ns NR:ns ## COG: Z5089 COG2801 # Protein_GI_number: 15804202 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 68 158 225 225 132 91.0 1e-31 MERFFRSLKTEWVPTNGYAGKDEARQQINDYILNYYNSVRPHHYNGGLTPEESENRYHFY CKTVANIT >gi|299856991|gb|ADWS01000073.1| GENE 3 2227 - 2436 199 69 aa, chain - ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 69 99 167 167 126 97.0 8e-30 MTDGWPLYESRLKRKLHVISKRYTQRIERHNLNLRQHLARLGRKLLSFSKSVELHDKVIG HYLNIKHYQ >gi|299856991|gb|ADWS01000073.1| GENE 4 2437 - 2622 57 61 aa, chain - ## HITS:1 COG:ECs1372 KEGG:ns NR:ns ## COG: ECs1372 COG1662 # Protein_GI_number: 15830626 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli O157:H7 # 1 61 37 97 167 119 98.0 2e-27 MIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVV V Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:42 2011 Seq name: gi|299856990|gb|ADWS01000074.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont73.1, whole genome shotgun sequence Length of sequence - 2679 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 2677 561 ## COG5301 Phage-related tail fibre protein Predicted protein(s) >gi|299856990|gb|ADWS01000074.1| GENE 1 1 - 2677 561 892 aa, chain - ## HITS:1 COG:STM4200 KEGG:ns NR:ns ## COG: STM4200 COG5301 # Protein_GI_number: 16767450 # Func_class: R General function prediction only # Function: Phage-related tail fibre protein # Organism: Salmonella typhimurium LT2 # 312 502 162 360 581 63 32.0 1e-09 VVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSRPGTLNDFLGA MTEDDARPEALRRFELMVEEVARNASVVAQNTAAAKKSASDASTSAREAATHATDAAGSA RAASTSAGQAASSAQSATSSAGTASTKATEASKSAAAAESSKSAAATSASAAKTSETNAA ASQQSAATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAK AAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASASASAAGKSAESAAS SASTATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSASSSASS ASASKDEATRQASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDI ASAVALEDASTTKKGIVQLSSATNSTSESLAATPKAVKAAYDLANGKYTAQDATTAQKGI IQLSSATNSTSETLAATPKAVKSAYDNAEKRLQKDQNGADIPDKGRFLNNINAVSKTDFA DKRGMRYVRVNAPAGATSGKYYPVVVMRSAGSVSELASRVIITTATRTAGDPMNNCEFNG FVMPGGWTDRGRYAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDG LSISAPGADLVVNDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKL FATDEIVARGGNQIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGE LVIGTKLSASLNGNALTATKLQTPRLVSGVEFDGSKDITLTAAHVAAFARRATDTYADAD GGVPWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSS Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:43 2011 Seq name: gi|299856989|gb|ADWS01000075.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont74.1, whole genome shotgun sequence Length of sequence - 2559 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 2557 1792 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856989|gb|ADWS01000075.1| GENE 1 1 - 2557 1792 852 aa, chain + ## HITS:1 COG:rhsB KEGG:ns NR:ns ## COG: rhsB COG3209 # Protein_GI_number: 16131354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 852 296 1147 1411 1630 97.0 0 LTHDPEYPENLPAAPLVRYGWTPRGELAVVYDRSGKQVRSFTYDDKYRGRMVAHRHTGRP EIRYRYDSDGRVTEQLNPAGLSYTYQYEKDHITITDSLDRREVLHTQGEAGLKRVVKKEH ADGSVTQSQFDAVGRLKAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHSQLT SATGPDGLEMRRKYDEYGRLIQETAPDGDITRYRYDNPHSDLPCATDDATGSRKTMTWSR YGQLLSFTDCSGYVTRYDHDRFGQVTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYE YNAAGDLTAVIAPDGSRNGTQYDAWGKAICTTQGGLTRSMEYDAAGRVIRLTSENGSHTT FRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVNGETA EQWQYDERGWLTDISHISEGHRVTVHYGYDEKGRLTGERQTVHHPQTEALLWQHETRHAY NAQGLANRCIPDSLPAVEWLTYGSGYLAGMKLGDTPLVEYTRDRLHRETLRRFGRYELTT AYTPAGQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANL DIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRYGRLTEKTDLIPEG GIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW MSLSRKPQVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA DALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP VYTPARKIHLYH Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:44 2011 Seq name: gi|299856988|gb|ADWS01000076.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont75.1, whole genome shotgun sequence Length of sequence - 2601 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 2146 719 ## COG5301 Phage-related tail fibre protein 2 1 Op 2 . + CDS 2146 - 2599 228 ## COG5525 Bacteriophage tail assembly protein Predicted protein(s) >gi|299856988|gb|ADWS01000076.1| GENE 1 2 - 2146 719 714 aa, chain + ## HITS:1 COG:STM4200 KEGG:ns NR:ns ## COG: STM4200 COG5301 # Protein_GI_number: 16767450 # Func_class: R General function prediction only # Function: Phage-related tail fibre protein # Organism: Salmonella typhimurium LT2 # 39 156 167 293 581 66 48.0 2e-10 AGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGVVQLSSATNSTSES QAATPKAVKAAYDLANGKYTAQDATTAQKGIVQLSSATNSASETLAATPKAVKAANDNAN GRVPSARKVNGKALSADITLTPKDIGTLNSTTMSFSGGAGWFKLATVTMPQASSIVYIAL IGGAGYNVGSPHQAGISELVLRAGNGNPKGITGALWKRTAVGLTNFAWINTSGDTYDIYV EIGNYATSVNIHWDCTANASVSVYTSPTYSASKPSSVTYGVVYTMYSSHQKPTPSDIGAL PTTGGTVSGPLSVTGGLTGSLNGNASTATKLQTARSIGGVVFDGSANINLPGVNTTGNQN TTGNAATATKLQTARKISGVPFDGSTDITLTAAHVAAFARRATDTYADADGGVPWNAESG AYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKN LPPESYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKP ASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSLSGSTNAA GNHSHRDGRRFNPSVFKDTYQYGYTSSGQNTWGVQGSVGMSTGALANTSTDGNHSHSLSG TAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA >gi|299856988|gb|ADWS01000076.1| GENE 2 2146 - 2599 228 151 aa, chain + ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 50 150 103 203 247 195 95.0 2e-50 MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNS DEASWHLVEDHRGKTVYDVASGDALFISELGSLPENVTWLSPEGEYQKWNGTAWVKDTEA EKLFRIREAEETKNNLMQVASEHIAPLQDAA Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:46 2011 Seq name: gi|299856987|gb|ADWS01000077.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont76.1, whole genome shotgun sequence Length of sequence - 2555 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 98 - 361 58 ## COG1209 dTDP-glucose pyrophosphorylase + Term 533 - 569 -0.6 + Prom 364 - 423 3.6 2 2 Tu 1 . + CDS 601 - 1767 1399 ## COG1004 Predicted UDP-glucose 6-dehydrogenase + Term 1783 - 1827 5.8 3 3 Tu 1 . - CDS 1819 - 2343 546 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 2378 - 2437 5.7 Predicted protein(s) >gi|299856987|gb|ADWS01000077.1| GENE 1 98 - 361 58 87 aa, chain + ## HITS:1 COG:STM2095 KEGG:ns NR:ns ## COG: STM2095 COG1209 # Protein_GI_number: 16765425 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Salmonella typhimurium LT2 # 16 86 219 292 292 63 41.0 9e-11 MSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPCPEEIAFRRGFINA EQLQLLAEPLKKTGYGQYLLNLIKGLV >gi|299856987|gb|ADWS01000077.1| GENE 2 601 - 1767 1399 388 aa, chain + ## HITS:1 COG:ugd KEGG:ns NR:ns ## COG: ugd COG1004 # Protein_GI_number: 16129969 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli K12 # 1 388 1 388 388 648 83.0 0 MKITISGTGYVGLSNGILIAQNHEVVALDIVQSKVDMLNQKKSPIVDKEIQDYLTHKELN FRATTDKEDAYRDADYVIIATPTDYDPKTNYFNTSTVEAVIKDVIAINPNAVMIIKSTIP VGLTKSIKEELGIDNVFFSPEFLREGRALYDNLHPSRIVIGERSERAERFAALLQEGAIK KDIPVLFTDSTEAEAIKLFANTYLAMRIAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN HYNNPSFGYGGYCLPKDTKQLLANYQAVPNNLISAIVDANRTRKDFISDSILALQPKVVG VYRLIMKSGSDNFRASSIQGIMKRIKAKGVQVIIYEPAMQEDEFFHSRVIRDLNAFKQEA DVIISNRMAEELADVADKVYTRDLFGSD >gi|299856987|gb|ADWS01000077.1| GENE 3 1819 - 2343 546 174 aa, chain - ## HITS:1 COG:BH3709 KEGG:ns NR:ns ## COG: BH3709 COG0451 # Protein_GI_number: 15616271 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Bacillus halodurans # 1 174 162 335 343 223 55.0 1e-58 MSHTYSHLYNLPTTGLRFFTVYGPWGRPDMALFKFTKAMIEGKSIDVYNYGKMKRDFTYI DDIAEAIIRLQDVIPQADADWTVETGSPATSSAPYRVYNIGNSSPVELMDYITALEEALG KEAEKNMMPIQPGDVLETSADTKALYDVIGFKPQISVKDGVKNFVDWYRAFYKV Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:47 2011 Seq name: gi|299856986|gb|ADWS01000078.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont77.1, whole genome shotgun sequence Length of sequence - 2587 bp Number of predicted genes - 6, with homology - 5 Number of transcription units - 3, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 10/0.000 + CDS 12 - 524 297 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 2 1 Op 2 10/0.000 + CDS 521 - 841 277 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 3 1 Op 3 . + CDS 823 - 1377 74 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 4 2 Tu 1 . - CDS 1322 - 1555 79 ## - Prom 1621 - 1680 4.5 + Prom 1632 - 1691 6.5 5 3 Op 1 . + CDS 1845 - 2279 293 ## COG0148 Enolase 6 3 Op 2 . + CDS 2333 - 2548 84 ## pECS88_0016 hypothetical protein Predicted protein(s) >gi|299856986|gb|ADWS01000078.1| GENE 1 12 - 524 297 170 aa, chain + ## HITS:1 COG:STM2863 KEGG:ns NR:ns ## COG: STM2863 COG1108 # Protein_GI_number: 16766169 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 162 116 277 286 244 83.0 7e-65 MNIQTIVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFFDENHARAIGLHPGRL KILFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVTIGSVTSFLG AWVSYFLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRRAHKALEDRS >gi|299856986|gb|ADWS01000078.1| GENE 2 521 - 841 277 106 aa, chain + ## HITS:1 COG:STM2864 KEGG:ns NR:ns ## COG: STM2864 COG1108 # Protein_GI_number: 16766170 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 2 99 3 100 282 135 76.0 1e-32 MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKSWALMGDAMSHAVFPGIVLAWI LGLPLATGAFVAGVFCAVATGYLKDNSRIKQDTVMGIVFLACLPQV >gi|299856986|gb|ADWS01000078.1| GENE 3 823 - 1377 74 184 aa, chain + ## HITS:1 COG:STM2864 KEGG:ns NR:ns ## COG: STM2864 COG1108 # Protein_GI_number: 16766170 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 173 103 275 282 189 63.0 2e-48 MFAAGLILYIAVKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFSF DYQQAQASGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRFHIA LLLATGISILVSMTGVWLSFFIDSAPAPTIVVLFAVMFIMTFTVTSINARTKENAEPRDL LSSD >gi|299856986|gb|ADWS01000078.1| GENE 4 1322 - 1555 79 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFCHYFPHFTALFATPENRHYLLSSPQQLSGNKTYQNHKSVHYSFKRIANKRMLLAECSA NRMITNPVVRHFPLCVR >gi|299856986|gb|ADWS01000078.1| GENE 5 1845 - 2279 293 144 aa, chain + ## HITS:1 COG:ML0255 KEGG:ns NR:ns ## COG: ML0255 COG0148 # Protein_GI_number: 15827047 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Mycobacterium leprae # 8 143 304 439 447 167 54.0 7e-42 MIFLPLTVAEDDWAGWKILHGALGEQIELVGDDLFVTNVKYIQRGIDENLANSALIKLNQ IGSLSETFDAVQLCHDNNWGTFISHRSGETVDSFIADMTVAMRAGHLKTGAPCRGERIEK YNQLMRIEDELGSSAQFAGKSAFK >gi|299856986|gb|ADWS01000078.1| GENE 6 2333 - 2548 84 71 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0016 NR:ns ## KEGG: pECS88_0016 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 71 20 90 90 110 100.0 2e-23 MKAHVFVISMLTGIVVTYAVLLLGCLFIDKTLPTVDVVILSLVVGASAQQLSRVLMSINR TFPYLACSQRI Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:55 2011 Seq name: gi|299856985|gb|ADWS01000079.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont78.1, whole genome shotgun sequence Length of sequence - 2542 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 10/0.000 + CDS 97 - 1380 184 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 2 1 Op 2 . + CDS 1370 - 2500 1296 ## COG0577 ABC-type antimicrobial peptide transport system, permease component Predicted protein(s) >gi|299856985|gb|ADWS01000079.1| GENE 1 97 - 1380 184 427 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 306 424 293 410 413 75 32 4e-14 MLWRMLRQSWGRNLRRKVLAIITVFLASSLISALLAVSIDIGDKMSRELKSYGANILIEP AGQAALPALFSESSNPLSGQDFLDEAELPNIKDIFWRNNIVGFAPMLGGEASVEGEPVRI LGTFFSQPVDIPDEEGYETGQKTVSPYWQVTGDWPQEPAGAEPQTLVGHALARQMGWKPG DKLTLRTEGEAVQVTVSGILSSGGDEDNQLVMPLSTVQHLLGLPGKVQAIRVSALTVPEN ELSRRARENLDALNAEEYDLWYCTAYVSSIAHQLEEAISGAEVRPVWQVAASEGVVIDKI QLLMAVVTVAALVASAMGIASLMTSTIMERAKEIGLMKALGARQWQIMLLFYLEAASSGL AGGALGCIAGWGLAKAIGVMLFDAPLNFAWIVVPCVLVIAVLIALIGTWFPARRIARLYP VEVLYGR >gi|299856985|gb|ADWS01000079.1| GENE 2 1370 - 2500 1296 376 aa, chain + ## HITS:1 COG:YPO1945 KEGG:ns NR:ns ## COG: YPO1945 COG0577 # Protein_GI_number: 16122191 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Yersinia pestis # 1 376 12 387 387 532 75.0 1e-151 MAAKRTMLWLLVWRALRLRFQRVSVVFAALMVGATIVTALSAVWFDINTKMSEELRTFGA NFYIGPGHGSSMPQQELQSILDQAPQGLVHGASPWLYGMARTELEKVVMVGVWFESLQKM VPYWQVTGSWIGVSFDDRNAMIGVKLAERLNVQPGDSITLVDHNQRKNLQIKGIVESGDA TDNMLIVSLDVAQAWLHQPGKISHGLLSVSNDVGQVENYASRLQAQYPDLEIRPVRKVSA SEGQVLDKIKGLMGLVSIVILALSSLCVNTTLMAIVGERAREFALQKALGSSNGDIVRQI LLETSIIALAAVACGWVLGYLLAQLLGLTVFNAAISLRLPVLPITLVLSLLVAILAAIVP VRRAVSVEPAKVLKGE Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:56 2011 Seq name: gi|299856984|gb|ADWS01000080.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont79.1, whole genome shotgun sequence Length of sequence - 2244 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 211 - 246 0.2 1 1 Tu 1 . - CDS 265 - 1170 465 ## COG3173 Predicted aminoglycoside phosphotransferase - Prom 1201 - 1260 3.6 2 2 Tu 1 . - CDS 1292 - 1996 388 ## COG3316 Transposase and inactivated derivatives - Prom 2020 - 2079 4.0 3 3 Tu 1 . + CDS 1973 - 2243 63 ## COG2963 Transposase and inactivated derivatives Predicted protein(s) >gi|299856984|gb|ADWS01000080.1| GENE 1 265 - 1170 465 301 aa, chain - ## HITS:1 COG:BH0381 KEGG:ns NR:ns ## COG: BH0381 COG3173 # Protein_GI_number: 15612944 # Func_class: R General function prediction only # Function: Predicted aminoglycoside phosphotransferase # Organism: Bacillus halodurans # 11 301 7 300 300 207 38.0 2e-53 MTVVTTADTSQLYALAARHGLKLHGPLTVNELGLDYRIVIATVDDGRRWVLRIPRRAEVS AKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTAMVIQPGSSTPDWVVPQDS EVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREFVVNDKRLHRW QRWLDDDSSWPDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVFG EEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFALDSGNEEYLAAAKAQLAAA E >gi|299856984|gb|ADWS01000080.1| GENE 2 1292 - 1996 388 234 aa, chain - ## HITS:1 COG:Cgl0933 KEGG:ns NR:ns ## COG: Cgl0933 COG3316 # Protein_GI_number: 19552183 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 233 1 234 236 272 57.0 4e-73 MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEK RLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLG KILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLK RIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM >gi|299856984|gb|ADWS01000080.1| GENE 3 1973 - 2243 63 90 aa, chain + ## HITS:1 COG:Z2074 KEGG:ns NR:ns ## COG: Z2074 COG2963 # Protein_GI_number: 15801515 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 30 90 20 80 108 100 95.0 6e-22 MPAFEWVHVQLHQQKGMISLSPPTICNSALESQGEYDSQWAAICSIAPKTGCTPETLRVW VRQYERDTGGGDGGLTSAERQRLKELEREN Prediction of potential genes in microbial genomes Time: Sun May 15 22:58:57 2011 Seq name: gi|299856983|gb|ADWS01000081.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont80.1, whole genome shotgun sequence Length of sequence - 2170 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 274 - 333 3.4 1 1 Op 1 . + CDS 427 - 909 173 ## EcE24377A_3132 hypothetical protein 2 1 Op 2 . + CDS 987 - 1940 746 ## ECO103_3367 hypothetical protein 3 1 Op 3 . + CDS 1997 - 2168 92 ## COG2963 Transposase and inactivated derivatives Predicted protein(s) >gi|299856983|gb|ADWS01000081.1| GENE 1 427 - 909 173 160 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3132 NR:ns ## KEGG: EcE24377A_3132 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 160 24 183 183 327 99.0 1e-88 MKTCQLKKNESVQLLSLRTIDGDTLYLKFRNVITGAFLDTPTKSYDFFGDVVLSQCINGS LIFALEYGSPYIKGCLVTGWENGFKGKNSPEGFCFAERNIPEAVWFGKNNILIIIRNQMD VGTWKGKYIIYDNAKKSGERAYSSDNLPSKDGYIIFALNK >gi|299856983|gb|ADWS01000081.1| GENE 2 987 - 1940 746 317 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3367 NR:ns ## KEGG: ECO103_3367 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 316 1 316 404 583 98.0 1e-165 MPVRLNTIPDAESYPAPPARIKWLSALLLMLSVGVAITSLFASDELAKNGPHFWGLACGV PAFIWSLVASVRWLFFITQYIRADAWNKRREEVILQETRRGRRALQILSFSVQTALNGDS VAETTAAFLARQQVLNTYVDLRGEDTVRRSVIPVLTNKPVTGRLSEIISRLFIDIRPQLF LLPPDFHINVLLEIDAPLSGASVRTIWQDEWQKAGLPEARLFSAPEPGLAAVDDWLDNFI QEKTVLLVISVYLEPKTPERTAESSTALLLANRLTQTALTPLALLHRPERITDTEMMASG IAQALDWMPVQPDVVAH >gi|299856983|gb|ADWS01000081.1| GENE 3 1997 - 2168 92 57 aa, chain + ## HITS:1 COG:ECs3871 KEGG:ns NR:ns ## COG: ECs3871 COG2963 # Protein_GI_number: 15833125 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 56 1 56 114 100 100.0 5e-22 MNKKTKRTFTPEFRLECAQLIVDKGYSYRQASEAMNVGSTTLESWVRQLRRERQGIT Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:05 2011 Seq name: gi|299856982|gb|ADWS01000082.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont81.1, whole genome shotgun sequence Length of sequence - 2100 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 250 292 ## Kvar_4576 extracellular solute-binding protein family 1 2 1 Op 2 2/0.000 - CDS 243 - 1316 975 ## COG3839 ABC-type sugar transport systems, ATPase components 3 1 Op 3 . - CDS 1322 - 2098 797 ## COG1409 Predicted phosphohydrolases Predicted protein(s) >gi|299856982|gb|ADWS01000082.1| GENE 1 1 - 250 292 83 aa, chain - ## HITS:1 COG:no KEGG:Kvar_4576 NR:ns ## KEGG: Kvar_4576 # Name: not_defined # Def: extracellular solute-binding protein family 1 # Organism: K.variicola # Pathway: ABC transporters [PATH:kva02010] # 1 83 1 83 436 155 96.0 4e-37 MFKPLTALTVGLSLALSGAALAKEKIDFMFPAPVDGKLTMEMTRVIKQFNDSQQDVEVRG IFTGNYDTTKIKAESAQKAGQPP >gi|299856982|gb|ADWS01000082.1| GENE 2 243 - 1316 975 357 aa, chain - ## HITS:1 COG:AGpA681 KEGG:ns NR:ns ## COG: AGpA681 COG3839 # Protein_GI_number: 16119690 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 346 4 356 360 323 47.0 2e-88 MLSLQNISKRFDGKPALSALSLDIHEGEFVVLVGPSGCGKSTLLRLLAGLEPVSEGQIWL HDENITATTPRDRNFAMIFQNYALFPHLSVRDNITFGMKVRKEEKSSWQPRVDKVAQMLQ LEALLDCKPAKLSGGQRQRVAMARAIVRNPRLFLMDEPLCNLDARLRSEVRDSIMALHQQ LKTSTIYVTHDQTEAMSMADRIVVMNGGHVQQVGHPEYLYANPANLFVAGFIGSPAMNLL SLPCANGEVLLGEQRHPLPPRHRDQTRVWLGVRPEHITDHVEEDHLRLPATVLQRELMGA DYLLHVSTPIGTLRFSRRNRGKVPEKDESLPIGFSPADVHLFHAETQHNLQMETDHV >gi|299856982|gb|ADWS01000082.1| GENE 3 1322 - 2098 797 258 aa, chain - ## HITS:1 COG:RSc1795 KEGG:ns NR:ns ## COG: RSc1795 COG1409 # Protein_GI_number: 17546514 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Ralstonia solanacearum # 3 203 19 227 282 95 32.0 9e-20 KLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYL IPGNHDDKAHFLEHLHPLCPQLGNDPQNMRYVVDDFATRLLFIDSSHAGTSKGWLTDETI GWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLELVERFPSLTRIFCGHN HSLTITQYLQALISTIPGTVHQVPYCHEDTRSYYDLSPASCLMHRQVGEQWVSYQHSLAH HAGPWLYDENISCPTEER Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:08 2011 Seq name: gi|299856981|gb|ADWS01000083.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont82.1, whole genome shotgun sequence Length of sequence - 1978 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 91 - 297 125 ## COG2801 Transposase and inactivated derivatives 2 1 Op 2 . + CDS 294 - 701 342 ## COG3637 Opacity protein and related surface antigens + Term 729 - 760 3.1 - Term 1122 - 1168 1.1 3 2 Tu 1 . - CDS 1263 - 1976 494 ## Z1919 hypothetical protein Predicted protein(s) >gi|299856981|gb|ADWS01000083.1| GENE 1 91 - 297 125 68 aa, chain + ## HITS:1 COG:Z5089 KEGG:ns NR:ns ## COG: Z5089 COG2801 # Protein_GI_number: 15804202 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 68 158 225 225 132 91.0 1e-31 MERFFRSLKTEWVPTNGYAGKDEARQQINDYILNYYNSVRPHHYNGGLTPEESENRYHFY CKTVANIT >gi|299856981|gb|ADWS01000083.1| GENE 2 294 - 701 342 135 aa, chain + ## HITS:1 COG:Z2146 KEGG:ns NR:ns ## COG: Z2146 COG3637 # Protein_GI_number: 15801583 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Escherichia coli O157:H7 EDL933 # 1 135 65 199 199 249 97.0 1e-66 MTTTFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVAYSRV STFSGDYLRVTDNKGKKHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSG DWRTDGFIVGVGYKF >gi|299856981|gb|ADWS01000083.1| GENE 3 1263 - 1976 494 237 aa, chain - ## HITS:1 COG:no KEGG:Z1919 NR:ns ## KEGG: Z1919 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157 # Pathway: not_defined # 1 237 13 249 249 126 94.0 6e-28 ACLVASSFEADADDADDAAELADDAAAVFEDSALVSDAFAFVSDVFAAEADLAAAVACSV ASPAFVVAVEADDAALSADFPAAVALAEACPALVDAALADDAAAVFEPAAAEALCPAAVS EDLAFVSDVFAAFAEFPAAVAEEAALLALDDAFVSDDFAASFEADASLAEVAASDAFVVA ADAEVAADFCDAAAFVSDVFAAPALVAAALFEDSAAAALFDASVAFVDAVPALEDAD Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:12 2011 Seq name: gi|299856980|gb|ADWS01000084.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont83.1, whole genome shotgun sequence Length of sequence - 2036 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:13 2011 Seq name: gi|299856979|gb|ADWS01000085.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont84.1, whole genome shotgun sequence Length of sequence - 1834 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 5/0.000 + CDS 3 - 1091 1006 ## COG0672 High-affinity Fe2+/Pb2+ permease 2 1 Op 2 . + CDS 1132 - 1659 722 ## COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport Predicted protein(s) >gi|299856979|gb|ADWS01000085.1| GENE 1 3 - 1091 1006 362 aa, chain + ## HITS:1 COG:YPO1941 KEGG:ns NR:ns ## COG: YPO1941 COG0672 # Protein_GI_number: 16122187 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Yersinia pestis # 2 351 285 634 639 524 76.0 1e-148 QDAIARYQGGDAKNAILDIQDTYFDRFEASGMENKIGSRDSAFKTTLEAYFTRLVSLMKA GQPVERLNAEASALTQDLQKAVTMLGEGEETQWSLLLYSLMIIVREGLEALLIVAAIVAY MVKNNHQDKLPLIRQSVIVALIASVITAAIFQMLFTNSGASRELLEGITMLIAVVMLFFM SYWLLSKVEARHWKAWLEGKLSHSLSRGSLVGLWLTSFLAVYREGAETVLFYYALIGDAN TVSGHMAIGAGFVIGCVVLLLAWLVMRYSVVRLPLKPFFMFTGSFMYLMAFVFAGKGVLE LVEGKLFQPTLINGFPEISWLGIYPYVETLLPQVVLLLAALVALWVMRRKSAVPGETIKN NP >gi|299856979|gb|ADWS01000085.1| GENE 2 1132 - 1659 722 175 aa, chain + ## HITS:1 COG:YPO1942 KEGG:ns NR:ns ## COG: YPO1942 COG3470 # Protein_GI_number: 16122188 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein probably involved in high-affinity Fe2+ transport # Organism: Yersinia pestis # 1 175 1 175 175 299 88.0 2e-81 MTMKKTLIASAVMASIFIAPAAFAFKEYPAGEPVTMNEMELAAVYLQPIDMEPRGMGLPA AKADVHLEADIHAVEGNKNGFGAGEWIPYLTISYTLVNNDTGEKQEGTFMPMVASDGPHY GANIKMMGVGNYKVTYHIEPPSKAGMHRHTDSETGVGRWWKPFDVSYEFKYVGLN Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:14 2011 Seq name: gi|299856978|gb|ADWS01000086.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont85.1, whole genome shotgun sequence Length of sequence - 1750 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 633 95 ## COG3209 Rhs family protein 2 1 Op 2 . + CDS 702 - 959 70 ## B21_00650 hypothetical protein 3 2 Tu 1 . + CDS 1077 - 1749 452 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856978|gb|ADWS01000086.1| GENE 1 1 - 633 95 210 aa, chain + ## HITS:1 COG:rhsC KEGG:ns NR:ns ## COG: rhsC COG3209 # Protein_GI_number: 16128676 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 210 1188 1397 1397 462 100.0 1e-130 LIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPISNIDPLGL ETLKCIKPLHSMGGTGERSGPDIWGNPFYHQYLCVPDGKGDYTCGGQDQRGESKGDGLWG PGKASNDTKEAAGRCDLVETDNSCVENCLKGKFKEVRPRYSVLPDIFTPINLGLFKNCQD WSNDSLETCKMKCSGNNIGRFIRFVFTGVM >gi|299856978|gb|ADWS01000086.1| GENE 2 702 - 959 70 85 aa, chain + ## HITS:1 COG:no KEGG:B21_00650 NR:ns ## KEGG: B21_00650 # Name: ybfB # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 85 24 108 108 124 100.0 7e-28 MHRLSLLDSTRDVSELISLMSYGMMVICFPTGIVFFIALIFIGTVSDIIGVRIDSKYIMA IIIWLYFLSGGYIQWFVLSKRIINK >gi|299856978|gb|ADWS01000086.1| GENE 3 1077 - 1749 452 224 aa, chain + ## HITS:1 COG:rhsC KEGG:ns NR:ns ## COG: rhsC COG3209 # Protein_GI_number: 16128676 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 224 923 1146 1397 439 98.0 1e-123 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRS RIQTIYQPGSFTPLIRVETATGEQAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:17 2011 Seq name: gi|299856977|gb|ADWS01000087.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont86.1, whole genome shotgun sequence Length of sequence - 1755 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 525 39 ## COG3231 Aminoglycoside phosphotransferase - Prom 739 - 798 4.7 2 2 Tu 1 . - CDS 823 - 1509 331 ## COG0294 Dihydropteroate synthase and related enzymes - Prom 1646 - 1705 2.1 Predicted protein(s) >gi|299856977|gb|ADWS01000087.1| GENE 1 3 - 525 39 174 aa, chain - ## HITS:1 COG:SMc02722 KEGG:ns NR:ns ## COG: SMc02722 COG3231 # Protein_GI_number: 15966137 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aminoglycoside phosphotransferase # Organism: Sinorhizobium meliloti # 1 133 85 217 303 165 60.0 4e-41 MVITAIPGVPAADLSGADLLKAWPSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSR NAVNPDFLPDEDKSTPQLDLLARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQC TGLIDLGRLGTADRYADLALMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRE >gi|299856977|gb|ADWS01000087.1| GENE 2 823 - 1509 331 228 aa, chain - ## HITS:1 COG:RSc1527 KEGG:ns NR:ns ## COG: RSc1527 COG0294 # Protein_GI_number: 17546246 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Ralstonia solanacearum # 1 222 63 282 291 118 35.0 7e-27 MIDLGPASSNPDAAPVSSDTEIERIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAYL NDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAALTG AGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRALTGRG PGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:18 2011 Seq name: gi|299856976|gb|ADWS01000088.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont87.1, whole genome shotgun sequence Length of sequence - 1642 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 216 93 ## COG2963 Transposase and inactivated derivatives - Prom 236 - 295 2.3 2 2 Tu 1 . + CDS 306 - 641 266 ## EcE24377A_0892 hypothetical protein + Term 855 - 885 3.0 3 3 Tu 1 . - CDS 897 - 1640 539 ## COG3547 Transposase and inactivated derivatives Predicted protein(s) >gi|299856976|gb|ADWS01000088.1| GENE 1 3 - 216 93 71 aa, chain - ## HITS:1 COG:ECs4535 KEGG:ns NR:ns ## COG: ECs4535 COG2963 # Protein_GI_number: 15833789 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 71 13 83 116 123 98.0 8e-29 MNKKTKRTFTPEFRLECAQLIVDKGYSYRQASEAMNVGSTTLESWVRQLRRERQGITPSA TPITPDQQRIR >gi|299856976|gb|ADWS01000088.1| GENE 2 306 - 641 266 111 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_0892 NR:ns ## KEGG: EcE24377A_0892 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 111 311 421 421 234 99.0 5e-61 MPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEK NLAYAHKVKAALEKGASPGDFPREDYETNWEGRFTLADLNIHGKRALGMDV >gi|299856976|gb|ADWS01000088.1| GENE 3 897 - 1640 539 247 aa, chain - ## HITS:1 COG:NMB1750 KEGG:ns NR:ns ## COG: NMB1750 COG3547 # Protein_GI_number: 15677594 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 1 242 74 315 316 152 36.0 5e-37 VSVINPALGKAFAQSEGLRNKTDTVDARMLAEFCRQKRPAAWEAPHPLERALRALVVRHQ ALTDMHTQELNRTETAREVQRPSIDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLE SIPGIGEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYESGSSVRGASRMSKAGHVSL RRALYMPAMVATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLAQVAYGVLKSGVPFDAS RHNPVAA Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:21 2011 Seq name: gi|299856975|gb|ADWS01000089.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont88.1, whole genome shotgun sequence Length of sequence - 1751 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 461 - 1045 240 ## COG1309 Transcriptional regulator 2 1 Op 2 . - CDS 1045 - 1608 255 ## ECUMN_4826 conserved hypothetical protein mrx Predicted protein(s) >gi|299856975|gb|ADWS01000089.1| GENE 1 461 - 1045 240 194 aa, chain - ## HITS:1 COG:mlr3373 KEGG:ns NR:ns ## COG: mlr3373 COG1309 # Protein_GI_number: 13472924 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 169 11 183 202 65 30.0 6e-11 MPRPKLKSDDEVLEAATVVLKRCGPIEFTLSGVAKEVGLSRAALIQRFTNRDTLLVRMME RGVEQVRHYLNAIPIGAGPQGLWEFLQVLVRSMNTRNDFSVNYLISWYELQVPELRTLAI QRNRAVVEGIRKRLPPGAPAAAELLLHSVIAGATMQWAVDPDGELADHVLAQIAAILCLM FPEHDDFQLLQAHA >gi|299856975|gb|ADWS01000089.1| GENE 2 1045 - 1608 255 187 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_4826 NR:ns ## KEGG: ECUMN_4826 # Name: not_defined # Def: conserved hypothetical protein mrx # Organism: E.coli_UMN026 # Pathway: not_defined # 1 187 226 412 412 240 100.0 2e-62 MIFVGIVGANGSVIMPALFVDAGRQVAELGLFSSMMGAGGLLGIAIHASVGARISAQNWL AVAFCGSAVGSLLLSQLPGVPVLMLLGALVGLLTGSVSPILNAAIYNRTPPELLGRVLGT VSAVMLSASPMVMLAAGAFVDLAGPLPGLVVSAVFAGLVALLSLRLQFATMAAAATASAP THTEGEH Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:25 2011 Seq name: gi|299856974|gb|ADWS01000090.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont89.1, whole genome shotgun sequence Length of sequence - 1688 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 602 442 ## COG2199 FOG: GGDEF domain + Term 656 - 694 2.0 - Term 818 - 855 6.3 2 2 Tu 1 . - CDS 869 - 1117 347 ## COG2261 Predicted membrane protein - Prom 1160 - 1219 3.6 Predicted protein(s) >gi|299856974|gb|ADWS01000090.1| GENE 1 3 - 602 442 199 aa, chain + ## HITS:1 COG:yeaP_2 KEGG:ns NR:ns ## COG: yeaP_2 COG2199 # Protein_GI_number: 16129748 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 26 199 1 174 174 338 100.0 3e-93 LQLFAGLIAQYIQKEALVEQLREANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHL NHKIMIAFIDLDNFKLINDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEFLVVSL NNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMY QEKKHKQKTPFVAHPALHS >gi|299856974|gb|ADWS01000090.1| GENE 2 869 - 1117 347 82 aa, chain - ## HITS:1 COG:YPO1181 KEGG:ns NR:ns ## COG: YPO1181 COG2261 # Protein_GI_number: 16121476 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 82 26 107 107 99 82.0 2e-21 MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGGWISTLFGFGKVDGFNF GSFVVAVIGAIVVLFIYRKIKS Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:26 2011 Seq name: gi|299856973|gb|ADWS01000091.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont90.1, whole genome shotgun sequence Length of sequence - 1680 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 250 174 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 296 - 355 6.1 + Prom 832 - 891 2.5 2 2 Op 1 . + CDS 1037 - 1303 179 ## COG1662 Transposase and inactivated derivatives, IS1 family 3 2 Op 2 . + CDS 1386 - 1679 258 ## p1ECUMN_0057 conserved hypothetical protein, putative regulatory protein in the aminoacid metabolism Predicted protein(s) >gi|299856973|gb|ADWS01000091.1| GENE 1 1 - 250 174 83 aa, chain - ## HITS:1 COG:STM2861 KEGG:ns NR:ns ## COG: STM2861 COG0803 # Protein_GI_number: 16766167 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Salmonella typhimurium LT2 # 8 83 9 83 305 118 78.0 3e-27 MLSIKKVTMLLGCLVLTCSIAFQASAAEKFKVITTFTIIADMAKNVAGDAAEVSSITKPG AEIHEYQPTPGDIKRAQGAQLIL >gi|299856973|gb|ADWS01000091.1| GENE 2 1037 - 1303 179 88 aa, chain + ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|299856973|gb|ADWS01000091.1| GENE 3 1386 - 1679 258 97 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0057 NR:ns ## KEGG: p1ECUMN_0057 # Name: not_defined # Def: conserved hypothetical protein, putative regulatory protein in the aminoacid metabolism # Organism: E.coli_UMN026 # Pathway: not_defined # 1 97 38 134 165 181 100.0 1e-44 MFDVHVVLDNQIGQLALLGKTLGNKGIGLEGGGIFTVGDECHAHFLVEQGKEAKIALEQA GLLVLAIRTPLIRKLKQEKPGELGEIARVLAENNINI Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:29 2011 Seq name: gi|299856972|gb|ADWS01000092.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont91.1, whole genome shotgun sequence Length of sequence - 1651 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 57 - 542 457 ## COG0526 Thiol-disulfide isomerase and thioredoxins 2 1 Op 2 . + CDS 567 - 1052 377 ## p1ECUMN_0036 hypothetical protein + Prom 1076 - 1135 2.2 3 2 Tu 1 . + CDS 1174 - 1651 425 ## EFER_1153 glucose-1-phosphatase/inositol phosphatase (EC:3.1.3.10) Predicted protein(s) >gi|299856972|gb|ADWS01000092.1| GENE 1 57 - 542 457 161 aa, chain + ## HITS:1 COG:YPO1947 KEGG:ns NR:ns ## COG: YPO1947 COG0526 # Protein_GI_number: 16122193 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Yersinia pestis # 17 157 19 159 165 187 63.0 6e-48 MRWHNVLLLAAAILISGCKEEKLAVGAPAPALAVFDLQGQESGLERWQGKAVYLNFWSAG CGGCLAEMDTLEALSKKWGDKVVVVAVNTDPETVRINDLLAKHQITYPVVRDQLNITQER YQVIGTPTSVLIDSEGRVLELHQGMRKPPELEATFARLAAR >gi|299856972|gb|ADWS01000092.1| GENE 2 567 - 1052 377 161 aa, chain + ## HITS:1 COG:no KEGG:p1ECUMN_0036 NR:ns ## KEGG: p1ECUMN_0036 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 161 1 161 161 277 100.0 1e-73 MAFIWNDESLAILRENAGILTTEQIAQLLHTNITAVRNMAYRLKLSLRVTAYNHRRIAQV QALYASETLSLKEIAAKTGLTASTVQYIVYVKSKNKPYATTEYVSFETENAVHYRVQKEF VDTERSLLDNISDNTRFRELYLTDGTFYCARNIKYEVFISE >gi|299856972|gb|ADWS01000092.1| GENE 3 1174 - 1651 425 159 aa, chain + ## HITS:1 COG:no KEGG:EFER_1153 NR:ns ## KEGG: EFER_1153 # Name: agp # Def: glucose-1-phosphatase/inositol phosphatase (EC:3.1.3.10) # Organism: E.fergusonii # Pathway: Glycolysis / Gluconeogenesis [PATH:efe00010] # 1 158 1 158 413 302 90.0 2e-81 MKKLILAAAVAGAVLLSSAAQAQTTPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNQ WSEWDVPGGQLTTKGGVLEIYMGHYMREWLAELGMVTSGECPTPDTVYTYANSLQRTVAT AQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAV Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:35 2011 Seq name: gi|299856971|gb|ADWS01000093.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont92.1, whole genome shotgun sequence Length of sequence - 1582 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 873 81 ## EcSMS35_1603 IS10 transposase 2 2 Tu 1 . - CDS 883 - 1299 252 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 1366 - 1425 9.7 Predicted protein(s) >gi|299856971|gb|ADWS01000093.1| GENE 1 1 - 873 81 290 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_1603 NR:ns ## KEGG: EcSMS35_1603 # Name: not_defined # Def: IS10 transposase # Organism: E.coli_SECEC # Pathway: not_defined # 1 290 113 402 402 579 100.0 1e-164 SVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKSV EKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKRLTKSNPISCQILLY KSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWVLATNLPVEIRTPKQLVNIYSKRMQIE ETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQANT VRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTHGYALGKL >gi|299856971|gb|ADWS01000093.1| GENE 2 883 - 1299 252 138 aa, chain - ## HITS:1 COG:YPO0456 KEGG:ns NR:ns ## COG: YPO0456 COG2207 # Protein_GI_number: 16120785 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 26 132 3 109 288 138 59.0 3e-33 MYIEQHSRYQNKANNIQLRYDDKQFHTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWY FQRLFKKVTGVTLASYIRARRLTKAAVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFK VTPSYYRRNKLWELEAMH Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:40 2011 Seq name: gi|299856970|gb|ADWS01000094.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont93.1, whole genome shotgun sequence Length of sequence - 1567 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 4, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 387 177 ## COG3316 Transposase and inactivated derivatives - Prom 565 - 624 2.0 2 2 Tu 1 . + CDS 614 - 850 102 ## gi|297622247|ref|YP_003675799.1| hypothetical protein pKOX105p69 3 3 Tu 1 . - CDS 1017 - 1166 66 ## EcSMS35_A0121 dihydrofolate reductase type 5 (EC:1.5.1.3) - Prom 1197 - 1256 2.1 4 4 Tu 1 . - CDS 1345 - 1500 103 ## EcSMS35_A0121 dihydrofolate reductase type 5 (EC:1.5.1.3) Predicted protein(s) >gi|299856970|gb|ADWS01000094.1| GENE 1 3 - 387 177 128 aa, chain - ## HITS:1 COG:Cgl0933 KEGG:ns NR:ns ## COG: Cgl0933 COG3316 # Protein_GI_number: 19552183 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 126 1 128 236 154 60.0 5e-38 MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEK RLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGK ALRGLKHW >gi|299856970|gb|ADWS01000094.1| GENE 2 614 - 850 102 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|297622247|ref|YP_003675799.1| ## NR: gi|297622247|ref|YP_003675799.1| hypothetical protein pKOX105p69 [Klebsiella oxytoca KOX105] # 1 78 81 158 158 150 100.0 2e-35 MVQMLVDPFGQFFDGLLLELVTFPELDVQGPGHLVEVPADSSKLPARFPYGVHFFISEDR HPVQRPQSFLYLNSPANM >gi|299856970|gb|ADWS01000094.1| GENE 3 1017 - 1166 66 49 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_A0121 NR:ns ## KEGG: EcSMS35_A0121 # Name: dhfrV # Def: dihydrofolate reductase type 5 (EC:1.5.1.3) # Organism: E.coli_SECEC # Pathway: One carbon pool by folate [PATH:ecm00670]; Folate biosynthesis [PATH:ecm00790]; Metabolic pathways [PATH:ecm01100] # 1 49 112 160 160 109 100.0 3e-23 MASTLHLSTIDIEPEGDVFFPSIPNTFEVVFEQHFTSNINYCYQIWKKG >gi|299856970|gb|ADWS01000094.1| GENE 4 1345 - 1500 103 51 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_A0121 NR:ns ## KEGG: EcSMS35_A0121 # Name: dhfrV # Def: dihydrofolate reductase type 5 (EC:1.5.1.3) # Organism: E.coli_SECEC # Pathway: One carbon pool by folate [PATH:ecm00670]; Folate biosynthesis [PATH:ecm00790]; Metabolic pathways [PATH:ecm01100] # 1 41 1 41 160 89 100.0 3e-17 MRTLKVSLMAAKAKNGVIGCGPDIPWSAKGEQLLFKALTYNSVASGGSQDV Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:49 2011 Seq name: gi|299856969|gb|ADWS01000095.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont94.1, whole genome shotgun sequence Length of sequence - 1559 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 211 - 270 2.8 1 1 Tu 1 . + CDS 461 - 661 157 ## ASA_P4G104 transposition modulator TnpM + Prom 663 - 722 2.4 2 2 Tu 1 . + CDS 787 - 1347 432 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 1472 - 1524 2.0 3 3 Tu 1 . - CDS 1341 - 1559 102 ## Predicted protein(s) >gi|299856969|gb|ADWS01000095.1| GENE 1 461 - 661 157 66 aa, chain + ## HITS:1 COG:no KEGG:ASA_P4G104 NR:ns ## KEGG: ASA_P4G104 # Name: tnpM # Def: transposition modulator TnpM # Organism: A.salmonicida # Pathway: not_defined # 1 66 129 194 194 120 100.0 2e-26 MNANEPSTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFQARASTATETSVKPDAC DSPPSG >gi|299856969|gb|ADWS01000095.1| GENE 2 787 - 1347 432 186 aa, chain + ## HITS:1 COG:DRC0005 KEGG:ns NR:ns ## COG: DRC0005 COG1961 # Protein_GI_number: 10957532 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Deinococcus radiodurans # 3 184 4 185 185 199 61.0 3e-51 MTGQRIGYIRVSTFDQNPERQLEGVKVDRAFSDKASGKDVKRPQLEALISFARTGDTVVV HSMDRLARNLDDLRRIVQTLTQRGVHIEFVKEHLSFTGEDSPMANLMLSVMGAFAEFERA LIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEAGEQKTKLAREFGISRETLYQ YLRTDQ >gi|299856969|gb|ADWS01000095.1| GENE 3 1341 - 1559 102 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no EFIDAQDDAGKAQVTELHREAQPIGWPAPLSDDREVGIVECVMSDQVVLGVRQRQQAFPL GGGQDGTTWHIY Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:56 2011 Seq name: gi|299856968|gb|ADWS01000096.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont95.1, whole genome shotgun sequence Length of sequence - 1464 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 1463 1003 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856968|gb|ADWS01000096.1| GENE 1 2 - 1463 1003 487 aa, chain + ## HITS:1 COG:ECs4864 KEGG:ns NR:ns ## COG: ECs4864 COG3209 # Protein_GI_number: 15834118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 487 142 628 1394 949 98.0 0 VRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWVLGWCERVPEADEVLPA PLPPYRVLTGLVDRFGRTQTFHHEAAGEFSGEITGVTDGAGRHFRLVLTTQAQRAEEARQ QAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGE LAVVYDRSGKQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQ YEKDHITITDSLNRREVLHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRTQTDAAGRT TEYSPDVVTGLITRITTPDGRASAFYYNHHSQLTSATGPDGLEIRREYDELGRLIQETAP DGDITRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMT AVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNAAGDLTAVIAPDGSRNGTQYDAWG KAICTTQ Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:57 2011 Seq name: gi|299856967|gb|ADWS01000097.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont96.1, whole genome shotgun sequence Length of sequence - 1492 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 3/0.000 - CDS 1 - 454 402 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins - Prom 602 - 661 6.8 - Term 773 - 809 6.3 2 1 Op 2 . - CDS 816 - 1463 504 ## COG0612 Predicted Zn-dependent peptidases Predicted protein(s) >gi|299856967|gb|ADWS01000097.1| GENE 1 1 - 454 402 151 aa, chain - ## HITS:1 COG:ECs2098 KEGG:ns NR:ns ## COG: ECs2098 COG0076 # Protein_GI_number: 15831352 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Escherichia coli O157:H7 # 1 150 1 150 466 320 100.0 4e-88 MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNL ATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVG TNTIGSSEACMLGGMAMKWRWRKRMEAAGKT >gi|299856967|gb|ADWS01000097.1| GENE 2 816 - 1463 504 215 aa, chain - ## HITS:1 COG:ECs2099 KEGG:ns NR:ns ## COG: ECs2099 COG0612 # Protein_GI_number: 15831353 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Escherichia coli O157:H7 # 1 215 717 931 931 388 98.0 1e-108 MALITRYLGSIKHSDSPLAAGKPLTRATDNASVTVKEQNEPVAQFSQWKRYDSRTPVNLA TRMALDAFNVALAKDLRVNIREQASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELL TLANEVMVKRLAKGISEQELNEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTE QEQLLKQMTVENVNTAVKQYLSHPVNTYTGVLLPK Prediction of potential genes in microbial genomes Time: Sun May 15 22:59:58 2011 Seq name: gi|299856966|gb|ADWS01000098.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont97.1, whole genome shotgun sequence Length of sequence - 1408 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 13 - 1062 304 ## COG0477 Permeases of the major facilitator superfamily + Term 1105 - 1139 3.2 - Term 1091 - 1126 4.2 2 2 Tu 1 . - CDS 1175 - 1408 194 ## p1ECUMN_0053 putative transcriptionnal regulator involved in tetracycline resistance Predicted protein(s) >gi|299856966|gb|ADWS01000098.1| GENE 1 13 - 1062 304 349 aa, chain + ## HITS:1 COG:AGl1300 KEGG:ns NR:ns ## COG: AGl1300 COG0477 # Protein_GI_number: 15890776 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 317 53 369 394 200 40.0 3e-51 MQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGA VAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSPFFIAALLNIVAF LVVMFWFRETKNTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYFSAQLIGQIPATVWV LFTENRFGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFL AFISEGWLVFPVLILLAGGGIALPALQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLL FAVIYNHSLPIWDGWIWIIGLAFYCIIILLSMTFMLTPQAQGSKQETSA >gi|299856966|gb|ADWS01000098.1| GENE 2 1175 - 1408 194 77 aa, chain - ## HITS:1 COG:no KEGG:p1ECUMN_0053 NR:ns ## KEGG: p1ECUMN_0053 # Name: tetC # Def: putative transcriptionnal regulator involved in tetracycline resistance # Organism: E.coli_UMN026 # Pathway: not_defined # 1 77 146 222 222 142 100.0 3e-33 ELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLNGWFMHIAIHAKNLKELADKK GQFIAIYRGFLLSLKDK Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:00 2011 Seq name: gi|299856965|gb|ADWS01000099.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont98.1, whole genome shotgun sequence Length of sequence - 1336 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 298 - 357 4.6 1 1 Op 1 . + CDS 407 - 604 88 ## ECUMN_4806 chloramphenicol acetyltransferase (EC:2.3.1.28) 2 1 Op 2 . + CDS 604 - 1065 229 ## COG4845 Chloramphenicol O-acetyltransferase Predicted protein(s) >gi|299856965|gb|ADWS01000099.1| GENE 1 407 - 604 88 65 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_4806 NR:ns ## KEGG: ECUMN_4806 # Name: cat # Def: chloramphenicol acetyltransferase (EC:2.3.1.28) # Organism: E.coli_UMN026 # Pathway: not_defined # 1 55 1 55 219 102 92.0 4e-21 MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFLKTVKKISTSFIRPLF TFLPA >gi|299856965|gb|ADWS01000099.1| GENE 2 604 - 1065 229 153 aa, chain + ## HITS:1 COG:DR2303 KEGG:ns NR:ns ## COG: DR2303 COG4845 # Protein_GI_number: 15807294 # Func_class: V Defense mechanisms # Function: Chloramphenicol O-acetyltransferase # Organism: Deinococcus radiodurans # 1 142 82 222 228 115 41.0 3e-26 MNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIYSQDVAC YGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYTQGDKVLMP LAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:02 2011 Seq name: gi|299856964|gb|ADWS01000100.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont99.1, whole genome shotgun sequence Length of sequence - 1265 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 1265 514 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856964|gb|ADWS01000100.1| GENE 1 2 - 1265 514 421 aa, chain - ## HITS:1 COG:ECs0560 KEGG:ns NR:ns ## COG: ECs0560 COG3209 # Protein_GI_number: 15829814 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 421 106 529 1398 768 94.0 0 VRDDGLILNDNGGRSIHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWASLPPD IRLSPHLYLATNSAQGPWWILGWSERVPGAEDVLPAPLPPYRVLTGLADRFGRTLTYRRE AAGDLAGEITGVTDGAGREFRLVLTTQAQRAEEARTSSLSSSDSSRPLSASPFPDTLPGT EYGPDRGIRLSAVWLMHDPAYPESLPGAPLARYTYTEAGELLAVYDRSNTQVRAFTYDAQ HPGRMVAHRYAGRPEMRYRYDDTGRVVEQLNPAGLSYRYQYEQDRITVTDSLNRREVLHT EGGAGLKRVVKKELADGSVTHSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDG RETKFYYNDGNQLTAVVSPDGLESRREYDEPGRLVSETSRSGETVRYRYDDAHSELPATT T Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:03 2011 Seq name: gi|299856963|gb|ADWS01000101.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont100.1, whole genome shotgun sequence Length of sequence - 1291 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 641 469 ## COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC - Prom 759 - 818 4.8 - Term 842 - 872 3.0 2 2 Tu 1 . - CDS 878 - 1285 266 ## COG0526 Thiol-disulfide isomerase and thioredoxins Predicted protein(s) >gi|299856963|gb|ADWS01000101.1| GENE 1 2 - 641 469 213 aa, chain - ## HITS:1 COG:VC2293 KEGG:ns NR:ns ## COG: VC2293 COG2869 # Protein_GI_number: 15642291 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC # Organism: Vibrio cholerae # 1 213 8 220 257 139 36.0 6e-33 MRKGKIIVASMMVLCVLIFVAAAAWFMLFQGEMTEPTEEEKQAAILHAAGLMKSETQDKK SVETLYHRYIIQRHVNLDSGELVAGSSADTARQKCEKLAPERDPAQVRQRCTVADVFFVK DKNNEIQQVIIPVTGKGAKSMMHAFLALGLDGRTVRNLYYYQQRETPFLGARVEDANWRK QWPGKRLLDNSGHPALKIVQDKPEHADEYTVDG >gi|299856963|gb|ADWS01000101.1| GENE 2 878 - 1285 266 135 aa, chain - ## HITS:1 COG:STM1116 KEGG:ns NR:ns ## COG: STM1116 COG0526 # Protein_GI_number: 16764474 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 2 135 35 168 168 189 74.0 1e-48 MPAMFDSTPLHTLDGETVTLASISEERPVLLYFWASWCGICRFTTPDVARLQSEGESVMT IALRSGNDGEVSRWLSRKRVTFPVVNDSGGEISRNWEISVTPTLVVVSKGQVVTTTSGWT SYWGMKLRLWRAAMF Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:04 2011 Seq name: gi|299856962|gb|ADWS01000102.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont101.1, whole genome shotgun sequence Length of sequence - 1248 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 557 135 ## COG1309 Transcriptional regulator + Term 775 - 816 4.0 2 2 Tu 1 . - CDS 535 - 939 201 ## COG0640 Predicted transcriptional regulators - Prom 1027 - 1086 3.6 Predicted protein(s) >gi|299856962|gb|ADWS01000102.1| GENE 1 3 - 557 135 184 aa, chain + ## HITS:1 COG:AGl1301 KEGG:ns NR:ns ## COG: AGl1301 COG1309 # Protein_GI_number: 15890777 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 179 70 256 261 134 39.0 1e-31 GLTTRKLAQKLGVEQPTLYWHVKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNA KSFRCALLSHRDGAKVHLGTRPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLG CVLEDQEHQVAKEERETPTTDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKC ESGS >gi|299856962|gb|ADWS01000102.1| GENE 2 535 - 939 201 134 aa, chain - ## HITS:1 COG:SMc00080 KEGG:ns NR:ns ## COG: SMc00080 COG0640 # Protein_GI_number: 15964678 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Sinorhizobium meliloti # 19 128 107 221 227 94 44.0 6e-20 MGISLNHGVHAKVSTPVHLRKARTCYDHLAGEVAVKIYDSLCQQQWITENGSMITLSGIQ YFHEMGIDVPSKHSRKICCACLDWSERRFHLGGYVGAALFSLYESKGWLTRHLGYREVTI TEKGYAAFKTHFHI Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:05 2011 Seq name: gi|299856961|gb|ADWS01000103.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont102.1, whole genome shotgun sequence Length of sequence - 1244 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 629 186 ## COG0477 Permeases of the major facilitator superfamily - Prom 679 - 738 6.5 + Prom 678 - 737 6.8 2 2 Tu 1 . + CDS 765 - 1242 255 ## pECS88_0013 aerobactin siderophore biosynthesis protein IucA Predicted protein(s) >gi|299856961|gb|ADWS01000103.1| GENE 1 2 - 629 186 209 aa, chain - ## HITS:1 COG:YPO0988 KEGG:ns NR:ns ## COG: YPO0988 COG0477 # Protein_GI_number: 16121292 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 16 205 20 209 407 189 64.0 3e-48 MSSKIEDTPQKTLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTNLSLSVWAALLMLGSML FLPSSPWWGKQISLTGSKTVVLWALGGYGVSFTLLGLGSVLMATGAVTTAVGLGILIIAR IVYGLTVSAMVPACQVWALQRAGEGNRMAALATISSGLSCGRLFGPLCAAAMLVIHPLAP VWMLMAAPVWAVVMLLRLPGTPPQPTPER >gi|299856961|gb|ADWS01000103.1| GENE 2 765 - 1242 255 159 aa, chain + ## HITS:1 COG:no KEGG:pECS88_0013 NR:ns ## KEGG: pECS88_0013 # Name: iucA # Def: aerobactin siderophore biosynthesis protein IucA # Organism: E.coli_S88 # Pathway: Lysine degradation [PATH:ecz00310] # 1 159 22 180 595 326 100.0 1e-88 MILPSEKSATDVAAQCFLNALIRETKDWQLAEYPPDELIIPLDEQKSLHFRVAYFSPTQH HRFAFPAHLVTASGSYPVDFTTLSRLIIDKLRHQLFLPVPLCETFHQRVLESYAHTQQTI DARHDWAILREKALNFGEAEQALLTGHAFHPAPKSHEPF Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:09 2011 Seq name: gi|299856960|gb|ADWS01000104.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont103.1, whole genome shotgun sequence Length of sequence - 1222 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 + CDS 46 - 351 231 ## COG3486 Lysine/ornithine N-monooxygenase 2 1 Op 2 . + CDS 380 - 1220 698 ## COG1629 Outer membrane receptor proteins, mostly Fe transport Predicted protein(s) >gi|299856960|gb|ADWS01000104.1| GENE 1 46 - 351 231 101 aa, chain + ## HITS:1 COG:YPO0993 KEGG:ns NR:ns ## COG: YPO0993 COG3486 # Protein_GI_number: 16121295 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Lysine/ornithine N-monooxygenase # Organism: Yersinia pestis # 12 64 355 407 442 84 67.0 5e-17 MPLITMHDKNTFKVRDDFTLEWSGPKENNIFVVNASMQTHGIAEPQLSLMAWRSARILNR VMGRDFIRSQYAARPDSVAQRHLGKTQPEAASLTRYTASLG >gi|299856960|gb|ADWS01000104.1| GENE 2 380 - 1220 698 280 aa, chain + ## HITS:1 COG:YPO0994 KEGG:ns NR:ns ## COG: YPO0994 COG1629 # Protein_GI_number: 16121296 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Yersinia pestis # 4 273 2 268 726 363 68.0 1e-100 MISKKYTLWALNPLLLTMMAPAVAQQTDDETFVVSANRSNRTVAEMAQTTWVIENAELEQ QIQGGKELKDALAQLIPGLDVSSRSRTNYGMNVRGRPLVVLVDGVRLNSSRTDSRQLDSI DPFNIDHIEVISGATSLYGGGSTGGLINIVTKKGQPETMMEFEAGTKSGFSSSKDHDERI AGAVSGGNEHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQYSDRLDIMGTGTLNIDE SRQLQLITQYYKSQGDDDYGLNLGKGFSAIRGTSTPFVSN Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:09 2011 Seq name: gi|299856959|gb|ADWS01000105.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont104.1, whole genome shotgun sequence Length of sequence - 1139 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 74 - 133 4.2 1 1 Tu 1 . + CDS 289 - 1138 101 ## COG5433 Transposase Predicted protein(s) >gi|299856959|gb|ADWS01000105.1| GENE 1 289 - 1138 101 283 aa, chain + ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 283 94 376 378 568 99.0 1e-162 MRDCHSSNDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNEIT AIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGTQGRLNKAFEEKFPLK ELNNPEHDSYAISEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQ KKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELF SGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSG Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:10 2011 Seq name: gi|299856958|gb|ADWS01000106.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont105.1, whole genome shotgun sequence Length of sequence - 1080 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 10 - 120 91.0 # AE017194 [D:4654188..4655695] # 5S ribosomal RNA # Bacillus cereus ATCC 10987 # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group. + 5S_RRNA 187 - 248 93.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + TRNA 421 - 496 59.8 # Glu TTC 0 0 + LSU_RRNA 610 - 1080 98.0 # CP000946 [D:468076..471061] # 23S ribosomal RNA # Escherichia coli ATCC 8739 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Predicted protein(s) Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:11 2011 Seq name: gi|299856957|gb|ADWS01000107.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont106.1, whole genome shotgun sequence Length of sequence - 1121 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 57 - 512 226 ## COG1414 Transcriptional regulator 2 1 Op 2 . + CDS 370 - 810 167 ## COG1414 Transcriptional regulator 3 2 Tu 1 . - CDS 856 - 1089 191 ## Aave_3877 2-keto-3-deoxygluconate permease Predicted protein(s) >gi|299856957|gb|ADWS01000107.1| GENE 1 57 - 512 226 151 aa, chain + ## HITS:1 COG:STM3533 KEGG:ns NR:ns ## COG: STM3533 COG1414 # Protein_GI_number: 16766819 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 2 129 4 131 251 119 44.0 2e-27 MIATKTPAIDKAARIFHFIAGKGSATYSEIHQNVGLPQSTTSALLASLTTHAFLRQKNGR YYLGLIFYELGNKAIQDFDFRELAEESLVFLRDQTRLACHLGVLDGSTGIYLAKKRKPEC DYRSQLDGKTTFPAQFLPWESVVGLASGRPH >gi|299856957|gb|ADWS01000107.1| GENE 2 370 - 810 167 146 aa, chain + ## HITS:1 COG:STM3533 KEGG:ns NR:ns ## COG: STM3533 COG1414 # Protein_GI_number: 16766819 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 10 144 116 251 251 129 50.0 2e-30 MVPPASIWRKKESQNAIIVRSWTGKRLSLHSSSLGKVLLAWLPEDHIDALLPTEHLPAFT ARTITTRKALKAELEVVRLQGWAFDNQEDVDDVTCIAAPVFNSDQAVVAAISISGVRFQM PEEKIPEYANAVMKAAGMMSEKLCGI >gi|299856957|gb|ADWS01000107.1| GENE 3 856 - 1089 191 77 aa, chain - ## HITS:1 COG:no KEGG:Aave_3877 NR:ns ## KEGG: Aave_3877 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: A.avenae # Pathway: not_defined # 2 76 275 349 355 75 66.0 6e-13 MDIMLGKGRGTAGIAASSTAGAAVATPLLVAEIAPDFAEAAPAATTLVASCVVITAIVVP VITALWAKHGASRVRAT Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:14 2011 Seq name: gi|299856956|gb|ADWS01000108.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont107.1, whole genome shotgun sequence Length of sequence - 1120 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 12 - 488 414 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 520 - 550 1.0 2 2 Tu 1 . - CDS 547 - 840 211 ## E2348C_1549 transposase of ISEc13 - Prom 895 - 954 5.4 Predicted protein(s) >gi|299856956|gb|ADWS01000108.1| GENE 1 12 - 488 414 158 aa, chain + ## HITS:1 COG:CAC0429 KEGG:ns NR:ns ## COG: CAC0429 COG1653 # Protein_GI_number: 15893720 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Clostridium acetobutylicum # 8 151 297 445 447 72 35.0 3e-13 MRENSKDFELGVAMLPAKEQRAVPIGGASLVSFKGISEAQKKAAYRFLTYLVSPEVNGAW SRFTGYFSPRKASYDTPEMKAYLQQDPRAAIALEQLKYAHPWYSTWETVAVRKAMENQLA AVVNDAKVRPEAAVQAAQKEADALMKPYVDKTALSEVK >gi|299856956|gb|ADWS01000108.1| GENE 2 547 - 840 211 97 aa, chain - ## HITS:1 COG:no KEGG:E2348C_1549 NR:ns ## KEGG: E2348C_1549 # Name: not_defined # Def: transposase of ISEc13 # Organism: E.coli_0127 # Pathway: not_defined # 1 97 361 457 457 196 95.0 2e-49 MLGLRQGGISEETQNDSCEKILAPTEWKLLWVKLEGKPLPSQTPTLKWACLKLAKLGRWY DSKRTGRPGWVVMWDGWFRLQDMVEGYLVMKSLDQEI Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:17 2011 Seq name: gi|299856955|gb|ADWS01000109.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont108.1, whole genome shotgun sequence Length of sequence - 1103 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 264 - 1101 599 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|299856955|gb|ADWS01000109.1| GENE 1 264 - 1101 599 279 aa, chain + ## HITS:1 COG:mlr6273 KEGG:ns NR:ns ## COG: mlr6273 COG2801 # Protein_GI_number: 13475245 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 21 279 15 273 535 152 36.0 8e-37 MATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVY VLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHRE VTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQV QIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVAC DKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRR Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:17 2011 Seq name: gi|299856954|gb|ADWS01000110.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont109.1, whole genome shotgun sequence Length of sequence - 1078 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 1077 254 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 Predicted protein(s) >gi|299856954|gb|ADWS01000110.1| GENE 1 1 - 1077 254 359 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 30 358 106 430 458 102 25 1e-22 RTALLAQQQARVDELRHAKYEGILEGNPAITVLHGSARFKDNRNLIVQLNDGGERVVAFD RCLIATGASPAVPPIPGLKDTPYWTSTEALVSETIPKRLAVIGSSVVALELAQAFARLGA KVTILARSTLFFREDPAIGEAVTAAFRMEGIEVREHTQASQVAYINGEGDGEFVLTTAHG ELRADKLLVATGRAPNTRKLALDATGVTLTPQGAIVIDPGMRTSVEHIYAAGDCTDQPQF VYVAAAAGTRAAINMTGGDAALNLTAMPAVVFTDPQVATVGYSEAEAHHDGIKTDSRTLT LDNVPRALANFDTRGFIKLVVEEGSGRLIGVQAVAPEAGELIQTAALAIRNRMTVQELA Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:18 2011 Seq name: gi|299856953|gb|ADWS01000111.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont110.1, whole genome shotgun sequence Length of sequence - 1071 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 542 - 1060 311 ## COG0477 Permeases of the major facilitator superfamily Predicted protein(s) >gi|299856953|gb|ADWS01000111.1| GENE 1 542 - 1060 311 172 aa, chain - ## HITS:1 COG:YPO0988 KEGG:ns NR:ns ## COG: YPO0988 COG0477 # Protein_GI_number: 16121292 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 7 166 236 395 407 122 51.0 2e-28 MLLAAAMSMMQLGLSPALTRQFDTDTTTISQQVAWLLGLSAIAALIAQFVVLRPQRLTPV ALLLSAGVLMSSGLAIMLTEQLWLFYLGCAVLSFGAALATPAYQLLLNDKLADGAGAGWL AASHTLGYGLCALLVPLASKTGVSIALIVTALFAAVLFTIVSACIWHYRTIK Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:19 2011 Seq name: gi|299856952|gb|ADWS01000112.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont111.1, whole genome shotgun sequence Length of sequence - 1066 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 25/0.000 - CDS 3 - 614 228 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 2 1 Op 2 1/0.000 - CDS 617 - 886 179 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 3 1 Op 3 . - CDS 849 - 1064 139 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin Predicted protein(s) >gi|299856952|gb|ADWS01000112.1| GENE 1 3 - 614 228 204 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 201 7 203 318 92 28 1e-19 MQSAGIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKAIMGFVRLTS GKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGMLRIAKKRDRQ IVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQGDVILLDEPFTGVDVKTEAKI ISLLRELRAEGKTMLVSTHNLGSV >gi|299856952|gb|ADWS01000112.1| GENE 2 617 - 886 179 89 aa, chain - ## HITS:1 COG:STM2861 KEGG:ns NR:ns ## COG: STM2861 COG0803 # Protein_GI_number: 16766167 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Salmonella typhimurium LT2 # 2 89 214 304 305 132 71.0 1e-31 MPINKETPQQVRKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTE NGPVPTYIDLLKVTTSTLVQGIKAGKREK >gi|299856952|gb|ADWS01000112.1| GENE 3 849 - 1064 139 71 aa, chain - ## HITS:1 COG:STM2861 KEGG:ns NR:ns ## COG: STM2861 COG0803 # Protein_GI_number: 16766167 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Salmonella typhimurium LT2 # 1 65 157 221 305 96 67.0 1e-20 QTYQRNADTYKAKITQTLAPLRKQIAELPENQRWMVTSEGAFSYLARDLGLKELYLWPIN ADQQGNTAAGT Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:20 2011 Seq name: gi|299856951|gb|ADWS01000113.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont112.1, whole genome shotgun sequence Length of sequence - 1069 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 215 176 ## SCV20 RepFIB replication protein A 2 2 Tu 1 . + CDS 322 - 1069 348 ## EcSMS35_A0095 repFIB replication protein A Predicted protein(s) >gi|299856951|gb|ADWS01000113.1| GENE 1 3 - 215 176 70 aa, chain + ## HITS:1 COG:no KEGG:SCV20 NR:ns ## KEGG: SCV20 # Name: repA, repC # Def: RepFIB replication protein A # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 17 70 1 54 339 89 79.0 3e-17 TRFSVLFFYCPQAGGFLENENSDIKKLFGEVDKSSGELVTLTPNNNNTVQPVALMRLGVF VPTLKSLKNK >gi|299856951|gb|ADWS01000113.1| GENE 2 322 - 1069 348 249 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0095 NR:ns ## KEGG: EcSMS35_A0095 # Name: repA # Def: repFIB replication protein A # Organism: E.coli_SECEC # Pathway: not_defined # 1 249 77 325 325 468 100.0 1e-131 MDNDFKTWVGIIHSFARHNVIGDKVELPFVEFAKLCGIPSSQSSRRLRERISPSLKRIAG TVISFSRTDEKHTREYITHLVQSAYYDTERDIVQLQADPRLFELYQFDRKVLLQLKAINA LKRRESAQALYTFIESLPRDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLD YTEIQRGRTKFFCIHYRRPRLKAPNDESKENPLQPSPAEKVSPEMAEKLALLEKLGITLD DLEKLFKSR Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:26 2011 Seq name: gi|299856950|gb|ADWS01000114.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont113.1, whole genome shotgun sequence Length of sequence - 1038 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 648 - 980 207 ## COG4584 Transposase and inactivated derivatives Predicted protein(s) >gi|299856950|gb|ADWS01000114.1| GENE 1 648 - 980 207 110 aa, chain - ## HITS:1 COG:YPCD1.97c KEGG:ns NR:ns ## COG: YPCD1.97c COG4584 # Protein_GI_number: 16082780 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 75 102 1 28 308 60 96.0 1e-09 MIKQMRQQGAYIVDIAAQIGCSERTVRRYLKYPEPPARKTCHKMVKLKPFMDYIDMRLAE NVWNSEVIFAEIKAMGYTGGRSMLRYYIQPKRKMRPSKRTRRELPVKRET Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:26 2011 Seq name: gi|299856949|gb|ADWS01000115.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont114.1, whole genome shotgun sequence Length of sequence - 966 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 964 670 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856949|gb|ADWS01000115.1| GENE 1 1 - 964 670 321 aa, chain + ## HITS:1 COG:rhsB KEGG:ns NR:ns ## COG: rhsB COG3209 # Protein_GI_number: 16131354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 321 834 1154 1411 622 98.0 1e-178 TTAYTPAGQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTSVHTTAA NLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIP EGVIRTDDERTHRYHYDSQHRLVHYTRTQYEEPLVESRYLYDPLGRRVAKRVWRRERDLT GWMSLSRKPQVTRYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS LTDTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM DPVYTPARKIHLYHCDHRGLP Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:27 2011 Seq name: gi|299856948|gb|ADWS01000116.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont115.1, whole genome shotgun sequence Length of sequence - 986 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 985 516 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856948|gb|ADWS01000116.1| GENE 1 1 - 985 516 328 aa, chain - ## HITS:1 COG:rhsD KEGG:ns NR:ns ## COG: rhsD COG3209 # Protein_GI_number: 16128481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 328 383 710 1426 604 98.0 1e-173 RYQYEQDRITVTDSLNRREVLHTEGGAGLKRVVKKELADGSVTHSGYDAAGRLTAQTDAA GRRTEYGLNVVSGDITDITTPDGRETKFYYNDGNQLTAVVSPDGLESRREYDEPGRLVSE TSRSGETVRYRYDDAHSELPATTTDATGSTRQMTWSRYGQLLAFTDCSGYQTRYEYDRFG QMTAVHREEGISLYRHYDNRGRLTSVKDAQGRETQYEYNAAGDLTAVITPDGNRSETQYD AWGKAVSTTQGGLTRSMEYDAAGRVISLTNENGSHSDFSYDALDRLVQQGGFDGRTQRYH YDLTGKLTQSEDEGLVTLWYYDESDRIT Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:28 2011 Seq name: gi|299856947|gb|ADWS01000117.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont116.1, whole genome shotgun sequence Length of sequence - 967 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 942 908 ## COG1629 Outer membrane receptor proteins, mostly Fe transport Predicted protein(s) >gi|299856947|gb|ADWS01000117.1| GENE 1 3 - 942 908 313 aa, chain - ## HITS:1 COG:YPO0994 KEGG:ns NR:ns ## COG: YPO0994 COG1629 # Protein_GI_number: 16121296 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Yersinia pestis # 1 313 328 640 726 409 64.0 1e-114 MTAFSSSQQDTDQYGMKLTLNSKPMDGWQITWGLDADHERFTSNQMFFDLAQASASGGLN NKKIYTTGRYPSYDITNLAAFLQSGYDINNLFTLNGGVRYQYTENKIDDFIGYAQQRQIA AGKATSADAIPGGSVDYDNFLFNAGLLMHITERQQAWLNFSQGVELPDPGKYYGRGIYGA AVNGHLPLTKSVNVSDSKLEGVKVDSYELGWRFTGNNLRTQIAAYYSISDKSVVANKDLT ISVVDDKRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGTWQKYDVKTASPSKATA YIGWAPDPWSLRV Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:29 2011 Seq name: gi|299856946|gb|ADWS01000118.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont117.1, whole genome shotgun sequence Length of sequence - 943 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 210 - 392 165 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 444 - 503 1.7 + Prom 625 - 684 2.3 2 2 Tu 1 . + CDS 793 - 943 89 ## Predicted protein(s) >gi|299856946|gb|ADWS01000118.1| GENE 1 210 - 392 165 60 aa, chain - ## HITS:1 COG:STM4486 KEGG:ns NR:ns ## COG: STM4486 COG1064 # Protein_GI_number: 16767731 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Salmonella typhimurium LT2 # 17 60 210 253 339 82 86.0 1e-16 MIGIGGLGHIAIKLLRAMGADRVVNSRDPEALKVLAGQFDLSINTVAVDLDWQPYFEALS >gi|299856946|gb|ADWS01000118.1| GENE 2 793 - 943 89 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNQTMKFSGAVCPSVIPLDDSGQIDLDGARKNIWHAFLIPASTAFCYQVP Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:34 2011 Seq name: gi|299856945|gb|ADWS01000119.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont118.1, whole genome shotgun sequence Length of sequence - 932 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 188 313 ## COG0251 Putative translation initiation inhibitor, yjgF family 2 1 Op 2 . - CDS 213 - 893 528 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase Predicted protein(s) >gi|299856945|gb|ADWS01000119.1| GENE 1 2 - 188 313 62 aa, chain - ## HITS:1 COG:NMA0861 KEGG:ns NR:ns ## COG: NMA0861 COG0251 # Protein_GI_number: 15793831 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Neisseria meningitidis Z2491 # 1 62 1 63 129 64 57.0 6e-11 MKKDIIYTTGAPAPGGALSQAVKAGETIYLAGQVGFDPHTMQVVSTDFDEQARQAFKNLL SV >gi|299856945|gb|ADWS01000119.1| GENE 2 213 - 893 528 226 aa, chain - ## HITS:1 COG:STM3532 KEGG:ns NR:ns ## COG: STM3532 COG0329 # Protein_GI_number: 16766818 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Salmonella typhimurium LT2 # 4 194 76 266 301 134 37.0 1e-31 MSDLPLIAHISSTVEEDMLYLADAAYDSGYDAVMVLPQYYYAQTSRQLLSYFRSLDRKLA GDWFIYNFPARTGCDVDAHLVRMLAESCPRFIGIKDTVDCASHTRAIVNAVTPLRKDFAV FAGFDEYFVPNLMNGGAGVLSGLNNVVPELFAQIMRAYRAGDLNEVAGLHKEIGRLSGIY AIGDDFVSTIKTAISRKYGYMTPVSRNHNGQLTADQADCLDKLFGL Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:34 2011 Seq name: gi|299856944|gb|ADWS01000120.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont119.1, whole genome shotgun sequence Length of sequence - 900 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 18 - 659 350 ## COG0582 Integrase Predicted protein(s) >gi|299856944|gb|ADWS01000120.1| GENE 1 18 - 659 350 213 aa, chain + ## HITS:1 COG:PSLT031 KEGG:ns NR:ns ## COG: PSLT031 COG0582 # Protein_GI_number: 17233417 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 1 207 33 257 260 160 49.0 2e-39 MATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGEARMLTPESFDLNGVR PFVRILSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMR NWLKQAVRRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYT RVFALDMAATLAVPFTGDGRDAAEILRTLPPLR Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:35 2011 Seq name: gi|299856943|gb|ADWS01000121.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont120.1, whole genome shotgun sequence Length of sequence - 849 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 3/0.000 - CDS 34 - 558 248 ## PROTEIN SUPPORTED gi|229250525|ref|ZP_04374554.1| acetyltransferase, ribosomal protein N-acetylase 2 1 Op 2 . - CDS 552 - 848 72 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Predicted protein(s) >gi|299856943|gb|ADWS01000121.1| GENE 1 34 - 558 248 174 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229250525|ref|ZP_04374554.1| acetyltransferase, ribosomal protein N-acetylase [Catenulispora acidiphila DSM 44928] # 9 165 29 184 194 100 33 5e-22 MLSFRIADPVSDAERFTRWMNDPRVEYFWEQSGSLEVQIAYLERQLTSKHAFPLIGCFDD RPFSYFEIYWAAEDRIGRHYSWQPFDRGLHLLVGEQQWRGAHYVQSWLRGVTHYLLLNEP RTQRTVLEPRTDNQRLFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL >gi|299856943|gb|ADWS01000121.1| GENE 2 552 - 848 72 98 aa, chain - ## HITS:1 COG:YPO0991 KEGG:ns NR:ns ## COG: YPO0991 COG1670 # Protein_GI_number: 16121293 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Yersinia pestis # 3 80 49 126 316 97 52.0 6e-21 CDALDQIFIAAPQLSAVVLPWSEWCEEPQALTLFGQVQSDIIHRSAFWQLPLWLSSPANR ASGEMVFDAEREIYFPQPPPPVRRVKFIVVTIHAFAGC Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:36 2011 Seq name: gi|299856942|gb|ADWS01000122.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont121.1, whole genome shotgun sequence Length of sequence - 750 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 748 440 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856942|gb|ADWS01000122.1| GENE 1 1 - 748 440 249 aa, chain + ## HITS:1 COG:rhsB KEGG:ns NR:ns ## COG: rhsB COG3209 # Protein_GI_number: 16131354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 249 887 1135 1411 478 97.0 1e-135 GVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRYGRLT EKTDLIPEGGIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVW RRERDLTGWMSLSRKPQVTRYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV EQMQNQMDP Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:36 2011 Seq name: gi|299856941|gb|ADWS01000123.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont122.1, whole genome shotgun sequence Length of sequence - 727 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 137 - 727 99.0 # CP000946 [D:468076..471061] # 23S ribosomal RNA # Escherichia coli ATCC 8739 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:37 2011 Seq name: gi|299856940|gb|ADWS01000124.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont123.1, whole genome shotgun sequence Length of sequence - 801 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 799 427 ## COG4644 Transposase and inactivated derivatives, TnpA family Predicted protein(s) >gi|299856940|gb|ADWS01000124.1| GENE 1 1 - 799 427 266 aa, chain + ## HITS:1 COG:CAP0093 KEGG:ns NR:ns ## COG: CAP0093 COG4644 # Protein_GI_number: 15004797 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, TnpA family # Organism: Clostridium acetobutylicum # 167 266 2 103 673 77 36.0 4e-14 RQSVILPALNAVERASAEAITRANRRIYDALAEPLADAHRRRLDDLLKRRDNGKTTWLAW LRQSPAKPNSRHMLEHIERLKAWQALDLPTGIERLVHQNRLLKIAREGGQMTPADLAKFE PQRRYATLVALATEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASGKAINAKVRLY GRIGQALIDAKQSGRDAFAAIEAVMSWDSFAESVTEAQKLAQPDDFDFLHRIGESYATLR RYAPEFLAVLKLRAAPAAKNVLDAIE Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:38 2011 Seq name: gi|299856939|gb|ADWS01000125.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont124.1, whole genome shotgun sequence Length of sequence - 790 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 215 224 ## EcE24377A_C0022 CopG family protein 2 1 Op 2 . + CDS 215 - 490 137 ## ECH74115_B0093 RelE/ParE family plasmid stabilization system protein + Prom 496 - 555 1.9 3 2 Tu 1 . + CDS 596 - 788 82 ## EcSMS35_A0105 hypothetical protein Predicted protein(s) >gi|299856939|gb|ADWS01000125.1| GENE 1 3 - 215 224 70 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_C0022 NR:ns ## KEGG: EcE24377A_C0022 # Name: not_defined # Def: CopG family protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 70 23 92 92 119 98.0 4e-26 KVDQMAARLERSRGWVIKQALSAWLAQEEERNRLTLEALDDVTSGQVIDHQAVQAWSDSL STDNPLPVPR >gi|299856939|gb|ADWS01000125.1| GENE 2 215 - 490 137 91 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_B0093 NR:ns ## KEGG: ECH74115_B0093 # Name: not_defined # Def: RelE/ParE family plasmid stabilization system protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 91 1 91 91 165 95.0 5e-40 MELKWTSKALSDLSRLFDFLVLASKPAAARTVQSLTQAPVILLTHPRMGEQLFQFEPREV RRIFAGEYEIRYEINGQTIYVLRLWHTRENR >gi|299856939|gb|ADWS01000125.1| GENE 3 596 - 788 82 64 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_A0105 NR:ns ## KEGG: EcSMS35_A0105 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 64 1 64 93 117 98.0 9e-26 MNYDEITKITAERISDYMTEAVNTDSIAVAEMFHNAAWGARTLWFELVTKIDIDIHKKNR YASY Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:43 2011 Seq name: gi|299856938|gb|ADWS01000126.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont125.1, whole genome shotgun sequence Length of sequence - 777 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 455 153 ## COG2200 FOG: EAL domain 2 1 Op 2 . - CDS 452 - 688 161 ## SeSA_B0043 putative mercury resistance protein Predicted protein(s) >gi|299856938|gb|ADWS01000126.1| GENE 1 2 - 455 153 151 aa, chain - ## HITS:1 COG:all4897_4 KEGG:ns NR:ns ## COG: all4897_4 COG2200 # Protein_GI_number: 17232389 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Nostoc sp. PCC 7120 # 13 141 17 148 272 114 42.0 6e-26 MTSSQPAGWTAAELAQAAARGQLDLHYQPLVDLRDHRIAGAEALMRWRHPRLGLLPPGQF LPLAESFGLMPEIGAWVLGEACRQMHKWQGPAWQPFRLAINVSASQVGPTFDDEVKRVLA DMALPAELLEIELTESVAFGNPALFASFDAL >gi|299856938|gb|ADWS01000126.1| GENE 2 452 - 688 161 78 aa, chain - ## HITS:1 COG:no KEGG:SeSA_B0043 NR:ns ## KEGG: SeSA_B0043 # Name: not_defined # Def: putative mercury resistance protein # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 78 1 78 78 132 100.0 4e-30 MNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGVAALALT GLFVLAVTRLLRAFRGGS Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:46 2011 Seq name: gi|299856937|gb|ADWS01000127.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont126.1, whole genome shotgun sequence Length of sequence - 771 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 354 239 ## COG0789 Predicted transcriptional regulators - Prom 380 - 439 2.6 + Prom 338 - 397 3.0 2 2 Tu 1 . + CDS 426 - 771 255 ## ASA_P4G088 putative mercuric transport protein Predicted protein(s) >gi|299856937|gb|ADWS01000127.1| GENE 1 3 - 354 239 117 aa, chain - ## HITS:1 COG:SMa0281 KEGG:ns NR:ns ## COG: SMa0281 COG0789 # Protein_GI_number: 16262604 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Sinorhizobium meliloti # 4 117 6 118 134 97 49.0 5e-21 MENNLENLTIGVFAKAAGVNVETIRFYQRKGLLREPDKPYGSIRRYGEADVVRVKFVKSA QRLGFSLDEIAELLRLDDGTHCEEASSLAEHKLKDVREKMADLARMETVLSELVCAC >gi|299856937|gb|ADWS01000127.1| GENE 2 426 - 771 255 115 aa, chain + ## HITS:1 COG:no KEGG:ASA_P4G088 NR:ns ## KEGG: ASA_P4G088 # Name: merT # Def: putative mercuric transport protein # Organism: A.salmonicida # Pathway: not_defined # 1 115 19 133 134 204 100.0 5e-52 MSEPQNGRGALFAGGLAAILASTCCLGPLVLVALGFSGAWIGNLTVLEPYRPLFIGAALV ALFFAWKRIYRPVQACKPGEVCAIPQVRATYKLIFWIVAVLVLVALGFPYVVPFF Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:49 2011 Seq name: gi|299856936|gb|ADWS01000128.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont127.1, whole genome shotgun sequence Length of sequence - 740 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 252 - 722 363 ## COG4644 Transposase and inactivated derivatives, TnpA family Predicted protein(s) >gi|299856936|gb|ADWS01000128.1| GENE 1 252 - 722 363 156 aa, chain - ## HITS:1 COG:AGpA506 KEGG:ns NR:ns ## COG: AGpA506 COG4644 # Protein_GI_number: 16119579 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, TnpA family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 151 369 518 527 176 59.0 1e-44 MLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAV FFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAAHALRGNGHAVDDSLLQYL SPLGWEHINLTGDYLWRSSAKIGAGKFRPLRPLQPA Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:50 2011 Seq name: gi|299856935|gb|ADWS01000129.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont128.1, whole genome shotgun sequence Length of sequence - 664 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 1 - 664 99.0 # CP001063 [R:2772744..2775646] # 23S ribosomal RNA # Shigella boydii CDC 3083-94 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella. Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:50 2011 Seq name: gi|299856934|gb|ADWS01000130.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont129.1, whole genome shotgun sequence Length of sequence - 664 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 5 - 662 315 ## COG3486 Lysine/ornithine N-monooxygenase Predicted protein(s) >gi|299856934|gb|ADWS01000130.1| GENE 1 5 - 662 315 219 aa, chain + ## HITS:1 COG:YPO0993 KEGG:ns NR:ns ## COG: YPO0993 COG3486 # Protein_GI_number: 16121295 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Lysine/ornithine N-monooxygenase # Organism: Yersinia pestis # 1 219 110 328 442 276 56.0 1e-74 MNNLYFSHTVENIDFDKKRRLFLVQTSQGEYFARNICLGTGKQPYLPPCVKHMTQSCFHA SEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRNNFNALDEAAFA DEYFTPEYISGFSGLEEDIRHQLLDEQKMTSDGITADSLLTIYRELYHRFEVLRKPRNIR LLPSRSVTTLESSGPGWKLLMEHHLDQGRESLESDVVIF Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:51 2011 Seq name: gi|299856933|gb|ADWS01000131.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont130.1, whole genome shotgun sequence Length of sequence - 637 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 6 - 82 96.0 # AE017194 [D:4654188..4655695] # 5S ribosomal RNA # Bacillus cereus ATCC 10987 # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group. + 5S_RRNA 149 - 210 93.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + TRNA 297 - 372 59.8 # Glu TTC 0 0 Predicted protein(s) Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:52 2011 Seq name: gi|299856932|gb|ADWS01000132.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont131.1, whole genome shotgun sequence Length of sequence - 642 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 326 210 ## COG2367 Beta-lactamase class A - Prom 496 - 555 6.4 Predicted protein(s) >gi|299856932|gb|ADWS01000132.1| GENE 1 2 - 326 210 108 aa, chain - ## HITS:1 COG:SMa1952 KEGG:ns NR:ns ## COG: SMa1952 COG2367 # Protein_GI_number: 16263521 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Sinorhizobium meliloti # 30 108 22 99 281 67 46.0 8e-12 MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRP EERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTE Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:52 2011 Seq name: gi|299856931|gb|ADWS01000133.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont132.1, whole genome shotgun sequence Length of sequence - 633 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 633 449 ## COG4264 Siderophore synthetase component Predicted protein(s) >gi|299856931|gb|ADWS01000133.1| GENE 1 3 - 633 449 210 aa, chain - ## HITS:1 COG:YPO0992 KEGG:ns NR:ns ## COG: YPO0992 COG4264 # Protein_GI_number: 16121294 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Yersinia pestis # 1 208 24 230 582 249 58.0 3e-66 VEYEQVFHAESQGDDRYCINLPGAQWRFIAERGIWGWLWIDAQTLRCADEPVLAQTLLMQ LKQVLSMSDATVAEHMQDLYATLLGDLQLLKARRGLSASDLINLNADRLQCLLSGHPKFV FNKGRRGWGKEALERYAPEYANTFRLHWLAVKREHMIWRCDNEMDIHQLLTAAMDPQEFA RFSQVWQENGLDHNWLPLPVHPWQWQQKSL Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:53 2011 Seq name: gi|299856930|gb|ADWS01000134.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont133.1, whole genome shotgun sequence Length of sequence - 620 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 30 - 618 605 ## COG0395 ABC-type sugar transport system, permease component Predicted protein(s) >gi|299856930|gb|ADWS01000134.1| GENE 1 30 - 618 605 196 aa, chain + ## HITS:1 COG:Rv2039c KEGG:ns NR:ns ## COG: Rv2039c COG0395 # Protein_GI_number: 15609176 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Mycobacterium tuberculosis H37Rv # 17 196 51 230 280 115 35.0 6e-26 MLTTSFSATTFGDDMASLLPRLPLTLDNFRDAWNSADWLSLYANTIIFTFGTFFVQLLTI TTAGYVFACHEFRGKQTLFLLFLVQLMIMPVVMMVPNMLTLKTFGLLNTLIGVMMPYFTS AFGVFLMRKAFLAIPKELEEAALMEGCSWWQVLFRVLLPMSWPSVLAFATVSITYHWNEY LWPLMMLNDPDKQVLT Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:54 2011 Seq name: gi|299856929|gb|ADWS01000135.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont134.1, whole genome shotgun sequence Length of sequence - 611 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 69 - 533 540 ## COG4264 Siderophore synthetase component Predicted protein(s) >gi|299856929|gb|ADWS01000135.1| GENE 1 69 - 533 540 154 aa, chain - ## HITS:1 COG:all0394 KEGG:ns NR:ns ## COG: all0394 COG4264 # Protein_GI_number: 17227890 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Nostoc sp. PCC 7120 # 2 149 458 605 606 58 30.0 4e-09 MLLAHQQNILVQMLGDLPVGFIYRDCQGSAFMPHATEWLDTIDEAQAENIFTREQLLRYF PYYLLVNSTFAVTAALGAAGLDSEANLMARVRTLLAEVRDQVTHKTCLNYVLESPYWNVK GNFFCYLNDHNENTIVDPSVIYFDFANPLQAQEV Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:54 2011 Seq name: gi|299856928|gb|ADWS01000136.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont135.1, whole genome shotgun sequence Length of sequence - 587 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:55 2011 Seq name: gi|299856927|gb|ADWS01000137.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont136.1, whole genome shotgun sequence Length of sequence - 585 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 583 236 ## COG0582 Integrase Predicted protein(s) >gi|299856927|gb|ADWS01000137.1| GENE 1 1 - 583 236 194 aa, chain - ## HITS:1 COG:VCA0291 KEGG:ns NR:ns ## COG: VCA0291 COG0582 # Protein_GI_number: 15601056 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Vibrio cholerae # 2 189 4 191 320 150 40.0 2e-36 VKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERK VSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEH RLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLS RARAWWLKDQAEGR Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:55 2011 Seq name: gi|299856926|gb|ADWS01000138.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont137.1, whole genome shotgun sequence Length of sequence - 579 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 139 - 330 103 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|299856926|gb|ADWS01000138.1| GENE 1 139 - 330 103 63 aa, chain - ## HITS:1 COG:ECs1208 KEGG:ns NR:ns ## COG: ECs1208 COG2801 # Protein_GI_number: 15830462 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 58 91 148 296 114 96.0 5e-26 MAVMGLAGVLRGKKVRTTVSRKTVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYSG VHH Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:56 2011 Seq name: gi|299856925|gb|ADWS01000139.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont138.1, whole genome shotgun sequence Length of sequence - 566 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:56 2011 Seq name: gi|299856924|gb|ADWS01000140.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont139.1, whole genome shotgun sequence Length of sequence - 559 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 543 412 ## COG4264 Siderophore synthetase component Predicted protein(s) >gi|299856924|gb|ADWS01000140.1| GENE 1 3 - 543 412 180 aa, chain - ## HITS:1 COG:YPO0992 KEGG:ns NR:ns ## COG: YPO0992 COG4264 # Protein_GI_number: 16121294 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Yersinia pestis # 1 180 244 423 582 272 72.0 3e-73 MVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYNTSCYRGIPGRYIAAGPLASRW LQQVFATDATLVQSGAVILGEPAAGYVSHEGYAALARAPYRYQEMLGVIWRENPCRWLKP DESPVLMATLMECDENNQPLAGAYIDRSGLDAETWLTQLFRVVVVPLYHLLCRYGVALIA Prediction of potential genes in microbial genomes Time: Sun May 15 23:00:57 2011 Seq name: gi|299856923|gb|ADWS01000141.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont140.1, whole genome shotgun sequence Length of sequence - 535 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 296 241 ## CKO_03092 2-keto-3-deoxygluconate permease 2 1 Op 2 . - CDS 329 - 535 126 ## COG0251 Putative translation initiation inhibitor, yjgF family Predicted protein(s) >gi|299856923|gb|ADWS01000141.1| GENE 1 2 - 296 241 98 aa, chain - ## HITS:1 COG:no KEGG:CKO_03092 NR:ns ## KEGG: CKO_03092 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: C.koseri # Pathway: not_defined # 1 98 1 98 327 129 76.0 3e-29 MNIKKTVEKIPGGMMLAPLFLGAVLHTFWPGTGKYFGSFTNGMITGVVPILAVWLFCMGA SIKISATGTVLKKSGTLVATKIATAWVCAFVFAQLLPE >gi|299856923|gb|ADWS01000141.1| GENE 2 329 - 535 126 68 aa, chain - ## HITS:1 COG:PA5339 KEGG:ns NR:ns ## COG: PA5339 COG0251 # Protein_GI_number: 15600532 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pseudomonas aeruginosa # 3 68 60 125 126 75 54.0 2e-14 VLSVAEAAGGSDRDIVKLNAYLTDVNMFPRFNAIMSEYFSPPYPARATLGIAALPQGAVI EIEAIMVL Prediction of potential genes in microbial genomes Time: Sun May 15 23:01:00 2011 Seq name: gi|299856922|gb|ADWS01000142.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont141.1, whole genome shotgun sequence Length of sequence - 526 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 109 - 513 246 ## COG1175 ABC-type sugar transport systems, permease components Predicted protein(s) >gi|299856922|gb|ADWS01000142.1| GENE 1 109 - 513 246 134 aa, chain - ## HITS:1 COG:mll1715 KEGG:ns NR:ns ## COG: mll1715 COG1175 # Protein_GI_number: 13471670 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 4 116 98 209 307 73 37.0 9e-14 MPGVTLALLLAVALSENHRVNRWLRTAFFFPMIIPMVSAAALWLFIFMPGLGLLDHYLAK LFGPMNNNWLGRSNSALLALALIGVWKFAGYYMLFFLAGLQSIPASTREAALMGGGYPHA GSFLRSRYRCCARR Prediction of potential genes in microbial genomes Time: Sun May 15 23:01:00 2011 Seq name: gi|299856921|gb|ADWS01000143.1| Escherichia coli MS 145-7 E_coliMS145-7-1.0.1_Cont143.1, whole genome shotgun sequence Length of sequence - 501 bp Number of predicted genes - 0