Prediction of potential genes in microbial genomes Time: Sat Jul 9 16:29:08 2011 Seq name: gi|224531373|gb|GG658179.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.1, whole genome shotgun sequence Length of sequence - 505762 bp Number of predicted genes - 472, with homology - 460 Number of transcription units - 143, operones - 92 average op.length - 4.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 16 - 75 5.4 1 1 Op 1 . + CDS 117 - 938 787 ## COG1792 Cell shape-determining protein 2 1 Op 2 . + CDS 928 - 1503 562 ## FN1493 hypothetical protein 3 1 Op 3 1/0.171 + CDS 1500 - 2159 544 ## COG1381 Recombinational DNA repair protein (RecF pathway) 4 1 Op 4 1/0.171 + CDS 2159 - 2638 739 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 5 1 Op 5 1/0.171 + CDS 2635 - 3093 598 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 6 1 Op 6 1/0.171 + CDS 3095 - 4027 1352 ## COG0223 Methionyl-tRNA formyltransferase 7 1 Op 7 1/0.171 + CDS 4024 - 4884 1109 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 8 1 Op 8 . + CDS 4877 - 5356 703 ## COG4492 ACT domain-containing protein 9 1 Op 9 . + CDS 5369 - 5812 528 ## COG0511 Biotin carboxyl carrier protein 10 1 Op 10 . + CDS 5836 - 7119 1596 ## COG1253 Hemolysins and related proteins containing CBS domains 11 1 Op 11 . + CDS 7116 - 7439 404 ## gi|257465823|ref|ZP_05630134.1| hypothetical protein FgonA2_00055 12 1 Op 12 9/0.000 + CDS 7450 - 7962 761 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 13 1 Op 13 1/0.171 + CDS 7979 - 10156 2377 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 14 1 Op 14 . + CDS 10168 - 11307 1267 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 15 1 Op 15 . + CDS 11313 - 11678 677 ## gi|257465827|ref|ZP_05630138.1| hypothetical protein FgonA2_00075 + Term 11707 - 11752 5.6 16 1 Op 16 . + CDS 11760 - 12230 732 ## COG2606 Uncharacterized conserved protein + Term 12258 - 12306 9.4 - Term 12374 - 12438 -0.9 17 2 Tu 1 . - CDS 12620 - 14251 1264 ## Lebu_0003 hypothetical protein - Prom 14359 - 14418 80.4 + Prom 14991 - 15050 80.4 18 3 Tu 1 . + CDS 15180 - 16835 1853 ## Lebu_0945 hypothetical protein + Term 16839 - 16887 10.2 - Term 16837 - 16867 -0.7 19 4 Tu 1 . - CDS 16873 - 17649 849 ## COG0251 Putative translation initiation inhibitor, yjgF family 20 5 Op 1 7/0.000 - CDS 17708 - 19009 1374 ## COG0001 Glutamate-1-semialdehyde aminotransferase 21 5 Op 2 2/0.000 - CDS 19006 - 19983 1247 ## COG0113 Delta-aminolevulinic acid dehydratase 22 5 Op 3 6/0.000 - CDS 19967 - 21445 1510 ## COG0007 Uroporphyrinogen-III methylase 23 5 Op 4 4/0.000 - CDS 21464 - 22363 815 ## COG0181 Porphobilinogen deaminase 24 5 Op 5 . - CDS 22375 - 23367 1010 ## COG0373 Glutamyl-tRNA reductase + Prom 23421 - 23480 8.2 25 6 Tu 1 . + CDS 23528 - 24397 240 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit + Prom 24462 - 24521 4.8 26 7 Op 1 26/0.000 + CDS 24547 - 25551 1744 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 25562 - 25599 6.2 27 7 Op 2 . + CDS 25614 - 26813 1959 ## COG0126 3-phosphoglycerate kinase 28 7 Op 3 . + CDS 26876 - 27037 209 ## gi|257465840|ref|ZP_05630151.1| hypothetical protein FgonA2_00140 29 7 Op 4 . + CDS 27009 - 27239 423 ## gi|315916998|ref|ZP_07913238.1| predicted protein + Term 27247 - 27290 4.4 30 7 Op 5 . + CDS 27303 - 28250 1039 ## COG0679 Predicted permeases + Term 28280 - 28330 10.7 + Prom 28307 - 28366 12.7 31 8 Op 1 2/0.000 + CDS 28429 - 29214 1039 ## COG1349 Transcriptional regulators of sugar metabolism 32 8 Op 2 3/0.000 + CDS 29224 - 30501 1399 ## COG3395 Uncharacterized protein conserved in bacteria 33 8 Op 3 2/0.000 + CDS 30516 - 31514 419 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 34 8 Op 4 . + CDS 31546 - 32904 2013 ## COG2610 H+/gluconate symporter and related permeases 35 8 Op 5 . + CDS 32940 - 33908 1279 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 36 9 Op 1 . - CDS 35422 - 35904 708 ## COG0780 Enzyme related to GTP cyclohydrolase I 37 9 Op 2 1/0.171 - CDS 35905 - 36600 979 ## COG0603 Predicted PP-loop superfamily ATPase 38 9 Op 3 1/0.171 - CDS 36609 - 37184 840 ## COG0302 GTP cyclohydrolase I 39 9 Op 4 22/0.000 - CDS 37185 - 37853 175 ## PROTEIN SUPPORTED gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 40 9 Op 5 . - CDS 37855 - 38283 478 ## COG0720 6-pyruvoyl-tetrahydropterin synthase - Prom 38306 - 38365 10.0 - Term 38443 - 38472 0.5 41 10 Tu 1 . - CDS 38480 - 39274 918 ## COG0501 Zn-dependent protease with chaperone function - Prom 39301 - 39360 12.9 - Term 39339 - 39371 4.2 42 11 Tu 1 . - CDS 39396 - 39650 464 ## - Prom 39701 - 39760 11.2 + Prom 39848 - 39907 9.5 43 12 Op 1 8/0.000 + CDS 39937 - 40503 733 ## COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 44 12 Op 2 6/0.000 + CDS 40523 - 41329 964 ## COG0368 Cobalamin-5-phosphate synthase 45 12 Op 3 2/0.000 + CDS 41344 - 41925 685 ## COG0406 Fructose-2,6-bisphosphatase 46 12 Op 4 1/0.171 + CDS 41938 - 42996 1199 ## COG2038 NaMN:DMB phosphoribosyltransferase 47 12 Op 5 1/0.171 + CDS 43014 - 43697 734 ## COG2003 DNA repair proteins 48 12 Op 6 1/0.171 + CDS 43698 - 44615 1369 ## COG1774 Uncharacterized homolog of PSP1 49 12 Op 7 . + CDS 44615 - 45280 659 ## COG4123 Predicted O-methyltransferase + Term 45284 - 45319 4.0 - Term 45261 - 45317 13.3 50 13 Op 1 . - CDS 45328 - 45672 400 ## Ilyop_0312 domain of unknown function DUF2023 51 13 Op 2 . - CDS 45692 - 46189 962 ## COG0716 Flavodoxins - Prom 46216 - 46275 15.0 + Prom 46213 - 46272 15.7 52 14 Op 1 . + CDS 46385 - 48367 3009 ## COG0556 Helicase subunit of the DNA excision repair complex 53 14 Op 2 1/0.171 + CDS 48376 - 49590 1180 ## COG1570 Exonuclease VII, large subunit 54 14 Op 3 5/0.000 + CDS 49571 - 50245 931 ## COG0457 FOG: TPR repeat 55 14 Op 4 13/0.000 + CDS 50264 - 51115 1084 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 56 14 Op 5 6/0.000 + CDS 51130 - 53379 2810 ## COG0550 Topoisomerase IA 57 14 Op 6 5/0.000 + CDS 53401 - 54708 1838 ## COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation 58 14 Op 7 1/0.171 + CDS 54730 - 55518 669 ## COG4974 Site-specific recombinase XerD 59 14 Op 8 . + CDS 55532 - 56620 1139 ## COG1161 Predicted GTPases 60 14 Op 9 . + CDS 56617 - 57009 478 ## FN1073 hypothetical protein 61 14 Op 10 . + CDS 57037 - 58443 1906 ## COG2509 Uncharacterized FAD-dependent dehydrogenases 62 14 Op 11 . + CDS 58445 - 59449 702 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 + Term 59464 - 59516 -0.9 + Prom 59456 - 59515 4.8 63 15 Op 1 21/0.000 + CDS 59544 - 60557 1504 ## COG0280 Phosphotransacetylase 64 15 Op 2 1/0.171 + CDS 60582 - 61784 1612 ## COG0282 Acetate kinase + Prom 61794 - 61853 7.2 65 16 Op 1 23/0.000 + CDS 61907 - 65248 4205 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 66 16 Op 2 . + CDS 65280 - 65486 189 ## COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit + Term 65502 - 65541 7.7 + Prom 65552 - 65611 8.5 67 17 Tu 1 . + CDS 65634 - 65708 96 ## + Term 65780 - 65824 7.2 68 18 Op 1 . + CDS 66209 - 67597 2093 ## COG1757 Na+/H+ antiporter 69 18 Op 2 . + CDS 67594 - 68256 819 ## gi|257452329|ref|ZP_05617628.1| hypothetical protein F3_04625 + Term 68274 - 68321 7.1 - Term 68254 - 68316 9.0 70 19 Tu 1 . - CDS 68447 - 68692 577 ## FN1796 hypothetical protein - Prom 68712 - 68771 10.5 + Prom 68707 - 68766 10.4 71 20 Op 1 . + CDS 68847 - 69650 1077 ## COG0253 Diaminopimelate epimerase 72 20 Op 2 1/0.171 + CDS 69643 - 71223 1876 ## COG0038 Chloride channel protein EriC 73 20 Op 3 . + CDS 71238 - 72617 1458 ## COG0534 Na+-driven multidrug efflux pump 74 20 Op 4 . + CDS 72614 - 73840 1786 ## COG2195 Di- and tripeptidases 75 20 Op 5 17/0.000 + CDS 73877 - 75190 1384 ## COG0168 Trk-type K+ transport systems, membrane components 76 20 Op 6 1/0.171 + CDS 75203 - 75862 921 ## COG0569 K+ transport systems, NAD-binding component 77 20 Op 7 24/0.000 + CDS 75878 - 77770 2441 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 78 20 Op 8 . + CDS 77772 - 78476 1044 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 79 20 Op 9 . + CDS 78495 - 82517 4042 ## Ilyop_0607 protein of unknown function DUF490 80 20 Op 10 . + CDS 82588 - 84711 2809 ## COG4775 Outer membrane protein/protective antigen OMA87 81 20 Op 11 . + CDS 84756 - 85235 845 ## FN1910 hypothetical protein 82 20 Op 12 . + CDS 85256 - 86257 1474 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 83 20 Op 13 . + CDS 86330 - 86944 757 ## COG5011 Uncharacterized protein conserved in bacteria 84 20 Op 14 . + CDS 86938 - 88212 1494 ## COG0172 Seryl-tRNA synthetase 85 20 Op 15 . + CDS 88199 - 88726 118 ## FN0109 hypothetical protein 86 20 Op 16 . + CDS 88702 - 89691 1628 ## COG0191 Fructose/tagatose bisphosphate aldolase 87 20 Op 17 . + CDS 89708 - 89785 75 ## + Prom 89788 - 89847 2.1 88 21 Op 1 12/0.000 + CDS 89871 - 92075 2844 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase 89 21 Op 2 . + CDS 92091 - 92606 679 ## COG0602 Organic radical activating enzymes + Term 92714 - 92765 2.1 + Prom 92780 - 92839 13.4 90 22 Tu 1 . + CDS 93001 - 93099 102 ## + Term 93130 - 93182 1.9 + Prom 93119 - 93178 4.2 91 23 Op 1 . + CDS 93204 - 95096 2319 ## COG0370 Fe2+ transport system protein B 92 23 Op 2 . + CDS 95125 - 95286 299 ## + Term 95294 - 95333 7.0 + Prom 96319 - 96378 7.3 93 24 Tu 1 . + CDS 96519 - 96866 313 ## FN1859 major outer membrane protein + Term 96905 - 96939 4.0 + Prom 96898 - 96957 9.2 94 25 Tu 1 . + CDS 96982 - 98622 1506 ## Lebu_0945 hypothetical protein + Term 98641 - 98688 4.2 - Term 98683 - 98717 4.0 95 26 Tu 1 . - CDS 98756 - 99310 506 ## FN1859 major outer membrane protein + Prom 100128 - 100187 16.2 96 27 Op 1 1/0.171 + CDS 100231 - 100827 844 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 97 27 Op 2 1/0.171 + CDS 100824 - 101300 659 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 98 27 Op 3 12/0.000 + CDS 101297 - 101764 640 ## COG0802 Predicted ATPase or kinase 99 27 Op 4 . + CDS 101745 - 102413 182 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase + Prom 102433 - 102492 5.7 100 28 Tu 1 . + CDS 102516 - 102836 364 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 102843 - 102880 3.2 + Prom 102842 - 102901 10.4 101 29 Op 1 . + CDS 102931 - 106545 4892 ## FN0610 hypothetical protein 102 29 Op 2 . + CDS 106560 - 108473 2811 ## COG0441 Threonyl-tRNA synthetase + Term 108485 - 108533 10.1 + Prom 108520 - 108579 9.4 103 30 Op 1 . + CDS 108603 - 112007 3293 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 104 30 Op 2 . + CDS 112023 - 113783 1821 ## Ilyop_1473 hypothetical protein 105 30 Op 3 . + CDS 113800 - 117234 3769 ## COG0587 DNA polymerase III, alpha subunit 106 30 Op 4 . + CDS 117247 - 117654 577 ## Ilyop_1471 biotin/lipoyl attachment domain-containing protein 107 30 Op 5 4/0.000 + CDS 117678 - 119021 1940 ## COG0439 Biotin carboxylase 108 30 Op 6 . + CDS 119090 - 119452 612 ## COG1302 Uncharacterized protein conserved in bacteria + Term 119461 - 119493 3.2 109 30 Op 7 . + CDS 119502 - 120038 657 ## Ilyop_1468 hypothetical protein 110 30 Op 8 . + CDS 120040 - 120264 331 ## gi|257452281|ref|ZP_05617580.1| hypothetical protein F3_04385 111 30 Op 9 . + CDS 120273 - 120677 699 ## COG0781 Transcription termination factor + Term 120683 - 120721 8.2 - Term 120671 - 120708 8.0 112 31 Tu 1 . - CDS 120753 - 121310 572 ## COG1971 Predicted membrane protein - Prom 121334 - 121393 8.0 + Prom 121147 - 121206 7.8 113 32 Op 1 1/0.171 + CDS 121395 - 122897 2033 ## COG0606 Predicted ATPase with chaperone activity 114 32 Op 2 1/0.171 + CDS 122944 - 123912 956 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT 115 32 Op 3 1/0.171 + CDS 123915 - 125297 1397 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 116 32 Op 4 1/0.171 + CDS 125287 - 125808 598 ## COG1555 DNA uptake protein and related DNA-binding proteins 117 32 Op 5 . + CDS 125820 - 126680 1423 ## COG1281 Disulfide bond chaperones of the HSP33 family 118 32 Op 6 1/0.171 + CDS 126667 - 127425 968 ## COG0084 Mg-dependent DNase 119 32 Op 7 . + CDS 127422 - 127766 387 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 120 32 Op 8 . + CDS 127776 - 127985 344 ## gi|257452271|ref|ZP_05617570.1| hypothetical protein F3_04335 121 32 Op 9 . + CDS 127995 - 128069 82 ## 122 32 Op 10 . + CDS 128116 - 129096 1347 ## COG1186 Protein chain release factor B + Term 129102 - 129143 8.1 - Term 129090 - 129131 0.5 123 33 Tu 1 . - CDS 129149 - 130012 933 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 130106 - 130165 9.7 + Prom 130093 - 130152 9.8 124 34 Tu 1 . + CDS 130183 - 131682 1957 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 131692 - 131729 5.7 + Prom 131735 - 131794 10.2 125 35 Tu 1 . + CDS 131837 - 133654 2221 ## COG0326 Molecular chaperone, HSP90 family + Term 133669 - 133723 7.8 126 36 Tu 1 . - CDS 133626 - 133751 95 ## - Prom 133780 - 133839 7.5 + Prom 133727 - 133786 6.7 127 37 Tu 1 . + CDS 133811 - 135109 1654 ## COG1362 Aspartyl aminopeptidase + Term 135166 - 135199 0.0 + Prom 135141 - 135200 3.2 128 38 Tu 1 . + CDS 135234 - 135455 247 ## PG1526 hypothetical protein + Term 135467 - 135496 1.4 - Term 135448 - 135491 11.2 129 39 Tu 1 . - CDS 135500 - 136381 1277 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 136508 - 136567 12.0 + Prom 136356 - 136415 12.3 130 40 Op 1 . + CDS 136546 - 138231 945 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 131 40 Op 2 . + CDS 138239 - 139288 892 ## COG0859 ADP-heptose:LPS heptosyltransferase 132 41 Op 1 . - CDS 139305 - 140039 473 ## FN1240 lipopolysaccharide core biosynthesis protein RfaY 133 41 Op 2 . - CDS 140036 - 141244 1079 ## COG0438 Glycosyltransferase - Prom 141271 - 141330 8.0 + Prom 141230 - 141289 12.9 134 42 Op 1 . + CDS 141434 - 142393 933 ## Sterm_3101 ADP-heptose:LPS heptosyltransferase-like protein 135 42 Op 2 . + CDS 142386 - 143342 641 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 136 42 Op 3 . + CDS 143343 - 144290 803 ## CGSHiEE_07675 N-acetylneuraminic acid synthase-like protein 137 42 Op 4 . + CDS 144313 - 145107 787 ## COG3475 LPS biosynthesis protein + Prom 145166 - 145225 6.5 138 43 Op 1 . + CDS 145338 - 145682 332 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 139 43 Op 2 . + CDS 145702 - 146406 775 ## COG1083 CMP-N-acetylneuraminic acid synthetase 140 43 Op 3 11/0.000 + CDS 146425 - 147288 744 ## COG1209 dTDP-glucose pyrophosphorylase 141 43 Op 4 11/0.000 + CDS 147344 - 148771 1270 ## COG1091 dTDP-4-dehydrorhamnose reductase 142 43 Op 5 . + CDS 148799 - 149905 1130 ## COG1088 dTDP-D-glucose 4,6-dehydratase 143 43 Op 6 . + CDS 149908 - 150462 507 ## FN1240 lipopolysaccharide core biosynthesis protein RfaY 144 43 Op 7 . + CDS 150443 - 150634 185 ## gi|257465952|ref|ZP_05630263.1| hypothetical protein FgonA2_00700 145 43 Op 8 . + CDS 150654 - 152291 1810 ## FN1654 hypothetical protein + Term 152314 - 152352 6.4 146 44 Op 1 3/0.000 - CDS 152327 - 153193 528 ## COG4750 CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes 147 44 Op 2 1/0.171 - CDS 153190 - 154122 681 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 148 44 Op 3 . - CDS 154106 - 155902 1652 ## COG1213 Predicted sugar nucleotidyltransferases 149 44 Op 4 . - CDS 155966 - 157369 1611 ## FN0687 hypothetical protein - Prom 157390 - 157449 4.5 + Prom 157366 - 157425 9.5 150 45 Op 1 38/0.000 + CDS 157523 - 159010 1929 ## COG0747 ABC-type dipeptide transport system, periplasmic component 151 45 Op 2 49/0.000 + CDS 159023 - 159937 809 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 152 45 Op 3 4/0.000 + CDS 159939 - 160715 890 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 153 45 Op 4 1/0.171 + CDS 160716 - 161417 313 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 154 45 Op 5 . + CDS 161417 - 162166 269 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 155 45 Op 6 . + CDS 162193 - 162996 935 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 156 45 Op 7 . + CDS 162968 - 163228 196 ## FN0686 integral membrane protein 157 45 Op 8 . + CDS 163222 - 164667 2311 ## COG4145 Na+/panthothenate symporter + Term 164676 - 164715 6.1 158 46 Op 1 . + CDS 164722 - 165123 721 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 159 46 Op 2 . + CDS 165127 - 166146 1270 ## COG2855 Predicted membrane protein - Term 165872 - 165909 2.3 160 47 Tu 1 . - CDS 166148 - 166579 597 ## COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) - Prom 166664 - 166723 10.0 + Prom 166664 - 166723 12.9 161 48 Op 1 32/0.000 + CDS 166794 - 167255 614 ## COG0779 Uncharacterized protein conserved in bacteria 162 48 Op 2 22/0.000 + CDS 167272 - 168333 658 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 163 48 Op 3 15/0.000 + CDS 168335 - 168856 446 ## PROTEIN SUPPORTED gi|237742963|ref|ZP_04573444.1| ribosomal protein L7Ae 164 48 Op 4 32/0.000 + CDS 168873 - 171014 3173 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 165 48 Op 5 1/0.171 + CDS 171030 - 171398 602 ## COG0858 Ribosome-binding factor A 166 48 Op 6 1/0.171 + CDS 171403 - 173079 1884 ## COG0608 Single-stranded DNA-specific exonuclease 167 48 Op 7 29/0.000 + CDS 173090 - 174379 2100 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) + Term 174393 - 174446 12.2 168 49 Op 1 24/0.000 + CDS 174513 - 175100 1012 ## COG0740 Protease subunit of ATP-dependent Clp proteases 169 49 Op 2 18/0.000 + CDS 175109 - 176380 267 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 170 49 Op 3 4/0.000 + CDS 176390 - 178702 2773 ## COG0466 ATP-dependent Lon protease, bacterial type 171 49 Op 4 3/0.000 + CDS 178713 - 179327 658 ## COG0218 Predicted GTPase 172 49 Op 5 . + CDS 179311 - 181974 3109 ## COG0525 Valyl-tRNA synthetase 173 49 Op 6 1/0.171 + CDS 182020 - 182892 970 ## COG0583 Transcriptional regulator 174 49 Op 7 . + CDS 182906 - 183484 766 ## COG0279 Phosphoheptose isomerase + Term 183526 - 183563 3.0 - Term 183509 - 183556 9.4 175 50 Tu 1 . - CDS 183578 - 183760 256 ## gi|315917139|ref|ZP_07913379.1| predicted protein - Prom 183805 - 183864 15.2 + Prom 183803 - 183862 12.8 176 51 Op 1 . + CDS 183943 - 185322 2137 ## COG1362 Aspartyl aminopeptidase 177 51 Op 2 . + CDS 185332 - 185799 664 ## COG0350 Methylated DNA-protein cysteine methyltransferase 178 51 Op 3 . + CDS 185796 - 186062 435 ## CLD_0905 hypothetical protein 179 51 Op 4 . + CDS 186056 - 187102 1560 ## COG0502 Biotin synthase and related enzymes 180 51 Op 5 . + CDS 187146 - 188543 1798 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 181 51 Op 6 1/0.171 + CDS 188540 - 189742 1534 ## COG1160 Predicted GTPases 182 51 Op 7 . + CDS 189753 - 190505 954 ## COG0708 Exonuclease III 183 51 Op 8 . + CDS 190519 - 191334 1082 ## COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase 184 51 Op 9 5/0.000 + CDS 191362 - 194628 3526 ## COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 185 51 Op 10 27/0.000 + CDS 194641 - 196068 1591 ## COG0286 Type I restriction-modification system methyltransferase subunit 186 51 Op 11 . + CDS 196080 - 197567 1431 ## COG0732 Restriction endonuclease S subunits 187 51 Op 12 . + CDS 197570 - 197833 334 ## gi|257452210|ref|ZP_05617509.1| hypothetical protein F3_04030 188 51 Op 13 . + CDS 197847 - 198215 525 ## Clocel_4011 hypothetical protein 189 51 Op 14 . + CDS 198241 - 199149 1070 ## COG3586 Uncharacterized conserved protein + Prom 199244 - 199303 3.3 190 52 Tu 1 . + CDS 199342 - 199443 75 ## + Term 199457 - 199504 -0.8 - Term 199450 - 199482 3.1 191 53 Tu 1 . - CDS 199513 - 200775 2009 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Prom 201089 - 201148 16.1 192 54 Op 1 . + CDS 201238 - 202233 1476 ## COG1052 Lactate dehydrogenase and related dehydrogenases 193 54 Op 2 . + CDS 202261 - 203442 1500 ## COG0786 Na+/glutamate symporter + Term 203472 - 203519 10.1 + Prom 203446 - 203505 2.7 194 55 Tu 1 . + CDS 203529 - 205037 1290 ## COG1404 Subtilisin-like serine proteases + Prom 205090 - 205149 8.2 195 56 Op 1 . + CDS 205211 - 207196 2341 ## COG3711 Transcriptional antiterminator 196 56 Op 2 . + CDS 207216 - 207521 482 ## gi|257452201|ref|ZP_05617500.1| hypothetical protein F3_03985 197 56 Op 3 9/0.000 + CDS 207563 - 207979 738 ## COG0511 Biotin carboxyl carrier protein 198 56 Op 4 1/0.171 + CDS 207997 - 209139 1783 ## COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 199 56 Op 5 21/0.000 + CDS 209198 - 210163 1515 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 200 56 Op 6 3/0.000 + CDS 210165 - 210962 1168 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 201 56 Op 7 1/0.171 + CDS 210984 - 212741 2593 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 202 56 Op 8 1/0.171 + CDS 212763 - 214001 1556 ## COG0786 Na+/glutamate symporter 203 56 Op 9 4/0.000 + CDS 214030 - 214824 1039 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) + Term 214829 - 214881 3.2 204 56 Op 10 2/0.000 + CDS 214903 - 216228 1873 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 205 56 Op 11 . + CDS 216240 - 217388 1530 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 206 56 Op 12 . + CDS 217406 - 217996 820 ## COG3291 FOG: PKD repeat + Term 218017 - 218060 6.2 207 57 Op 1 . + CDS 218075 - 219055 1305 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 208 57 Op 2 4/0.000 + CDS 219091 - 220074 1202 ## COG0502 Biotin synthase and related enzymes 209 57 Op 3 12/0.000 + CDS 220064 - 220759 787 ## COG0132 Dethiobiotin synthetase 210 57 Op 4 . + CDS 220743 - 222086 1744 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 211 57 Op 5 . + CDS 222098 - 222913 1255 ## ELI_2339 hypothetical protein + Term 223048 - 223097 14.2 + Prom 223026 - 223085 4.2 212 58 Tu 1 . + CDS 223114 - 225651 3232 ## COG0474 Cation transport ATPase + Term 225658 - 225705 7.2 + Prom 225697 - 225756 5.4 213 59 Tu 1 . + CDS 225782 - 226243 667 ## Smon_1033 hypothetical protein + Prom 226245 - 226304 7.7 214 60 Op 1 1/0.171 + CDS 226336 - 227850 2098 ## COG0747 ABC-type dipeptide transport system, periplasmic component 215 60 Op 2 . + CDS 227863 - 228891 1523 ## COG1363 Cellulase M and related proteins + Term 228900 - 228937 6.4 + Prom 228952 - 229011 12.4 216 61 Op 1 1/0.171 + CDS 229038 - 229568 328 ## COG1106 Predicted ATPases 217 61 Op 2 . + CDS 229580 - 230293 564 ## COG1106 Predicted ATPases 218 61 Op 3 . + CDS 230296 - 230940 291 ## FN1197 hypothetical protein 219 61 Op 4 . + CDS 230988 - 231464 290 ## gi|257466025|ref|ZP_05630336.1| hypothetical protein FgonA2_01075 + Term 231515 - 231554 9.1 + Prom 231752 - 231811 9.2 220 62 Tu 1 . + CDS 231874 - 234174 2954 ## COG5295 Autotransporter adhesin + Term 234363 - 234400 -0.8 + Prom 234239 - 234298 7.1 221 63 Tu 1 . + CDS 234508 - 235647 1218 ## COG0675 Transposase and inactivated derivatives + Term 235779 - 235817 1.1 + Prom 235834 - 235893 8.7 222 64 Op 1 1/0.171 + CDS 235939 - 236526 833 ## COG0517 FOG: CBS domain 223 64 Op 2 . + CDS 236547 - 239081 3479 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 224 64 Op 3 . + CDS 239092 - 241023 2208 ## COG3855 Uncharacterized protein conserved in bacteria + Term 241044 - 241091 0.3 + Prom 241025 - 241084 12.5 225 65 Op 1 1/0.171 + CDS 241111 - 242541 1800 ## COG2067 Long-chain fatty acid transport protein 226 65 Op 2 . + CDS 242572 - 243138 763 ## COG1309 Transcriptional regulator + Term 243144 - 243176 4.0 - Term 243132 - 243164 3.2 227 66 Op 1 5/0.000 - CDS 243169 - 244317 979 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 244370 - 244429 2.1 228 66 Op 2 . - CDS 244476 - 245270 742 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 245306 - 245365 17.7 + Prom 245302 - 245361 11.2 229 67 Op 1 . + CDS 245440 - 245844 478 ## COG0824 Predicted thioesterase 230 67 Op 2 . + CDS 245907 - 247115 860 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 231 67 Op 3 . + CDS 247126 - 247587 571 ## Ilyop_1758 GCN5-related N-acetyltransferase 232 67 Op 4 1/0.171 + CDS 247580 - 248221 695 ## COG0177 Predicted EndoIII-related endonuclease 233 67 Op 5 20/0.000 + CDS 248282 - 249454 1887 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 234 67 Op 6 1/0.171 + CDS 249499 - 249876 680 ## COG0822 NifU homolog involved in Fe-S cluster formation + Prom 249899 - 249958 3.2 235 68 Op 1 . + CDS 249993 - 251138 1449 ## COG1686 D-alanyl-D-alanine carboxypeptidase 236 68 Op 2 . + CDS 251155 - 251577 417 ## FN0731 hypothetical protein 237 68 Op 3 . + CDS 251574 - 251693 79 ## gi|257452168|ref|ZP_05617467.1| hypothetical protein F3_03820 + Term 251703 - 251749 1.4 + Prom 251695 - 251754 10.1 238 69 Op 1 1/0.171 + CDS 251853 - 252962 1436 ## COG3055 Uncharacterized protein conserved in bacteria 239 69 Op 2 2/0.000 + CDS 252966 - 253973 1016 ## COG1609 Transcriptional regulators 240 69 Op 3 9/0.000 + CDS 253987 - 254976 368 ## PROTEIN SUPPORTED gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 241 69 Op 4 1/0.171 + CDS 254994 - 256847 694 ## PROTEIN SUPPORTED gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 242 69 Op 5 4/0.000 + CDS 256851 - 257753 329 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 243 69 Op 6 3/0.000 + CDS 257750 - 258622 1283 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 244 69 Op 7 . + CDS 258632 - 259309 1083 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase + Term 259310 - 259345 3.5 + Prom 259327 - 259386 2.9 245 70 Tu 1 . + CDS 259407 - 259868 711 ## COG2731 Beta-galactosidase, beta subunit + Prom 259896 - 259955 3.7 246 71 Op 1 2/0.000 + CDS 260002 - 261420 2219 ## COG0469 Pyruvate kinase 247 71 Op 2 . + CDS 261454 - 262761 2170 ## COG0148 Enolase + Term 262790 - 262827 6.4 + Prom 262842 - 262901 9.8 248 72 Op 1 . + CDS 262922 - 263149 384 ## FN1099 hypothetical protein 249 72 Op 2 . + CDS 263134 - 263403 412 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 250 72 Op 3 . + CDS 263467 - 263565 241 ## 251 72 Op 4 . + CDS 263567 - 264280 813 ## FN0557 hypothetical protein + Term 264290 - 264329 6.0 - Term 264271 - 264321 9.5 252 73 Op 1 . - CDS 264324 - 265631 2074 ## COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH 253 73 Op 2 2/0.000 - CDS 265662 - 266588 381 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 254 73 Op 3 . - CDS 266613 - 267233 674 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 267258 - 267317 9.8 + Prom 267304 - 267363 11.3 255 74 Op 1 . + CDS 267393 - 267851 550 ## COG0219 Predicted rRNA methylase (SpoU class) 256 74 Op 2 . + CDS 267855 - 268424 820 ## COG0817 Holliday junction resolvasome, endonuclease subunit 257 74 Op 3 . + CDS 268437 - 269465 1420 ## COG2008 Threonine aldolase 258 74 Op 4 . + CDS 269476 - 270585 1081 ## COG1323 Predicted nucleotidyltransferase 259 74 Op 5 3/0.000 + CDS 270582 - 271340 727 ## COG2211 Na+/melibiose symporter and related transporters 260 74 Op 6 1/0.171 + CDS 271371 - 271871 560 ## COG2211 Na+/melibiose symporter and related transporters 261 74 Op 7 . + CDS 271874 - 273028 753 ## COG0658 Predicted membrane metal-binding protein + Term 273116 - 273150 -0.5 + Prom 273092 - 273151 5.5 262 75 Op 1 . + CDS 273190 - 273756 768 ## COG1739 Uncharacterized conserved protein 263 75 Op 2 . + CDS 273783 - 274850 576 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 264 75 Op 3 . + CDS 274912 - 275136 263 ## COG1314 Preprotein translocase subunit SecG + Term 275150 - 275208 0.2 + Prom 275155 - 275214 4.8 265 76 Op 1 1/0.171 + CDS 275237 - 276469 1612 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 266 76 Op 2 13/0.000 + CDS 276471 - 277712 1686 ## COG0124 Histidyl-tRNA synthetase 267 76 Op 3 . + CDS 277716 - 279500 2367 ## COG0173 Aspartyl-tRNA synthetase + Term 279511 - 279558 5.2 - Term 279499 - 279544 3.2 268 77 Tu 1 . - CDS 279602 - 280177 525 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase - Prom 280201 - 280260 8.0 + Prom 280159 - 280218 12.8 269 78 Op 1 4/0.000 + CDS 280273 - 280674 521 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 270 78 Op 2 . + CDS 280677 - 282011 1309 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 271 79 Tu 1 . - CDS 282036 - 283628 1699 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain - Prom 283648 - 283707 9.1 + Prom 283661 - 283720 8.8 272 80 Op 1 17/0.000 + CDS 283748 - 284722 972 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 273 80 Op 2 24/0.000 + CDS 284706 - 285446 222 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 274 80 Op 3 . + CDS 285430 - 286185 647 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Term 286353 - 286397 -0.8 + Prom 286191 - 286250 6.0 275 81 Op 1 7/0.000 + CDS 286423 - 287730 1789 ## COG2233 Xanthine/uracil permeases 276 81 Op 2 . + CDS 287749 - 288315 813 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Term 288395 - 288448 12.3 277 82 Tu 1 . - CDS 288426 - 289664 1139 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 289887 - 289946 6.0 278 83 Op 1 1/0.171 + CDS 289972 - 290715 1203 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 279 83 Op 2 . + CDS 290702 - 292228 1852 ## COG2385 Sporulation protein and related proteins 280 83 Op 3 1/0.171 + CDS 292247 - 295093 3378 ## COG0178 Excinuclease ATPase subunit 281 83 Op 4 . + CDS 295102 - 295683 976 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 282 83 Op 5 . + CDS 295704 - 296297 753 ## COG0406 Fructose-2,6-bisphosphatase 283 83 Op 6 . + CDS 296307 - 297581 1392 ## FN0825 putative cytoplasmic protein 284 83 Op 7 24/0.000 + CDS 297578 - 298651 1377 ## COG0845 Membrane-fusion protein 285 83 Op 8 36/0.000 + CDS 298626 - 299300 319 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 286 83 Op 9 . + CDS 299369 - 300523 1424 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 287 83 Op 10 17/0.000 + CDS 300542 - 301024 514 ## COG0500 SAM-dependent methyltransferases + Prom 301120 - 301179 3.4 288 83 Op 11 . + CDS 301201 - 301707 456 ## COG0500 SAM-dependent methyltransferases 289 84 Op 1 . - CDS 303204 - 304712 1650 ## COG0747 ABC-type dipeptide transport system, periplasmic component 290 84 Op 2 . - CDS 304734 - 305891 1120 ## Ilyop_1346 hypothetical protein 291 84 Op 3 11/0.000 - CDS 305898 - 306632 924 ## COG0818 Diacylglycerol kinase 292 84 Op 4 7/0.000 - CDS 306635 - 307129 777 ## COG0319 Predicted metal-dependent hydrolase 293 84 Op 5 . - CDS 307141 - 309240 739 ## PROTEIN SUPPORTED gi|163762592|ref|ZP_02169656.1| ribosomal protein S21 294 84 Op 6 . - CDS 309251 - 311329 2703 ## COG1199 Rad3-related DNA helicases - Prom 311429 - 311488 12.6 + Prom 311401 - 311460 9.9 295 85 Tu 1 . + CDS 311559 - 313028 2127 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 313055 - 313098 10.5 - Term 313040 - 313086 8.1 296 86 Tu 1 . - CDS 313087 - 313185 60 ## - Prom 313304 - 313363 4.2 + Prom 313030 - 313089 5.6 297 87 Op 1 . + CDS 313211 - 315280 2742 ## COG0480 Translation elongation factors (GTPases) 298 87 Op 2 . + CDS 315308 - 316681 1600 ## COG0006 Xaa-Pro aminopeptidase + Term 316687 - 316720 4.5 - Term 316673 - 316708 5.8 299 88 Op 1 . - CDS 316715 - 318673 2273 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain 300 88 Op 2 . - CDS 318701 - 319165 456 ## COG4807 Uncharacterized protein conserved in bacteria 301 88 Op 3 . - CDS 319165 - 320376 1660 ## COG0426 Uncharacterized flavoproteins - Prom 320401 - 320460 6.6 + Prom 320352 - 320411 10.2 302 89 Tu 1 . + CDS 320595 - 321542 1645 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase + Term 321560 - 321610 10.8 + Prom 321564 - 321623 9.1 303 90 Op 1 1/0.171 + CDS 321698 - 322132 340 ## COG2826 Transposase and inactivated derivatives, IS30 family + Prom 322139 - 322198 3.4 304 90 Op 2 . + CDS 322295 - 322633 293 ## COG2826 Transposase and inactivated derivatives, IS30 family + Prom 322654 - 322713 6.4 305 91 Op 1 38/0.000 + CDS 322753 - 324297 1431 ## COG0747 ABC-type dipeptide transport system, periplasmic component 306 91 Op 2 49/0.000 + CDS 324301 - 325269 629 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 307 91 Op 3 13/0.000 + CDS 325273 - 326073 554 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 308 91 Op 4 . + CDS 326086 - 327762 367 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 327775 - 327815 -0.7 + Prom 327813 - 327872 11.1 309 92 Op 1 1/0.171 + CDS 328021 - 328344 181 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 310 92 Op 2 2/0.000 + CDS 328393 - 328743 385 ## COG1695 Predicted transcriptional regulators 311 92 Op 3 . + CDS 328747 - 329538 682 ## COG0500 SAM-dependent methyltransferases 312 93 Op 1 . - CDS 329590 - 330138 764 ## COG2849 Uncharacterized protein conserved in bacteria - Prom 330166 - 330225 7.8 313 93 Op 2 . - CDS 330227 - 330502 512 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 330599 - 330658 9.7 + Prom 330548 - 330607 7.5 314 94 Op 1 41/0.000 + CDS 330662 - 330925 497 ## COG0234 Co-chaperonin GroES (HSP10) 315 94 Op 2 . + CDS 330936 - 332555 1554 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Prom 332572 - 332631 3.4 316 94 Op 3 . + CDS 332654 - 333373 1019 ## FN0558 TraT complement resistance protein precursor + Term 333408 - 333453 6.2 + Prom 333438 - 333497 10.4 317 95 Op 1 1/0.171 + CDS 333541 - 335235 2544 ## COG1109 Phosphomannomutase 318 95 Op 2 2/0.000 + CDS 335219 - 336316 1131 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 319 95 Op 3 14/0.000 + CDS 336329 - 337009 854 ## COG0325 Predicted enzyme with a TIM-barrel fold 320 95 Op 4 1/0.171 + CDS 337021 - 337587 808 ## COG1799 Uncharacterized protein conserved in bacteria 321 95 Op 5 . + CDS 337591 - 338589 1319 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 322 95 Op 6 1/0.171 + CDS 338657 - 339256 890 ## COG0344 Predicted membrane protein 323 95 Op 7 1/0.171 + CDS 339268 - 340269 1431 ## COG0240 Glycerol-3-phosphate dehydrogenase 324 95 Op 8 . + CDS 340295 - 341113 986 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 325 95 Op 9 . + CDS 341129 - 342250 1127 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) + Term 342272 - 342313 5.6 326 96 Op 1 2/0.000 + CDS 342328 - 343257 616 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 327 96 Op 2 1/0.171 + CDS 343279 - 343818 392 ## COG0514 Superfamily II DNA helicase 328 96 Op 3 . + CDS 343796 - 345061 1201 ## COG0514 Superfamily II DNA helicase 329 96 Op 4 23/0.000 + CDS 345058 - 346227 1578 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 330 96 Op 5 . + CDS 346220 - 346903 241 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 331 96 Op 6 . + CDS 346980 - 347522 508 ## PROTEIN SUPPORTED gi|34763431|ref|ZP_00144379.1| PROBABLE SIGMA(54) MODULATION PROTEIN; SSU ribosomal protein S30P + Term 347539 - 347572 4.0 332 97 Op 1 . + CDS 347599 - 348795 1493 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 333 97 Op 2 . + CDS 348798 - 349574 1230 ## FN1064 hypothetical protein 334 97 Op 3 . + CDS 349576 - 350037 822 ## FN1065 hypothetical protein + Term 350054 - 350101 10.5 - Term 350040 - 350089 7.1 335 98 Op 1 . - CDS 350109 - 350873 957 ## COG2116 Formate/nitrite family of transporters 336 98 Op 2 2/0.000 - CDS 350901 - 351878 1380 ## COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 337 98 Op 3 6/0.000 - CDS 351888 - 352691 971 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 338 98 Op 4 . - CDS 352719 - 353726 947 ## COG1145 Ferredoxin - Prom 353748 - 353807 10.4 - Term 353777 - 353806 -0.2 339 99 Op 1 1/0.171 - CDS 353822 - 354508 558 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 340 99 Op 2 1/0.171 - CDS 354525 - 355604 786 ## COG0859 ADP-heptose:LPS heptosyltransferase 341 99 Op 3 . - CDS 355591 - 356358 967 ## COG1183 Phosphatidylserine synthase - Prom 356391 - 356450 7.0 + Prom 356293 - 356352 8.4 342 100 Tu 1 . + CDS 356493 - 357719 1548 ## FN0173 hypothetical protein + Prom 357823 - 357882 11.1 343 101 Op 1 1/0.171 + CDS 357909 - 360062 2458 ## COG0210 Superfamily I DNA and RNA helicases 344 101 Op 2 4/0.000 + CDS 360078 - 360905 976 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase 345 101 Op 3 25/0.000 + CDS 360918 - 361343 697 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 346 101 Op 4 5/0.000 + CDS 361359 - 362132 1334 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 347 101 Op 5 5/0.000 + CDS 362132 - 362935 910 ## COG3494 Uncharacterized protein conserved in bacteria 348 101 Op 6 1/0.171 + CDS 362946 - 364019 1341 ## COG0763 Lipid A disaccharide synthetase 349 101 Op 7 . + CDS 364016 - 365785 260 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 350 101 Op 8 8/0.000 + CDS 365785 - 366534 1056 ## COG0689 RNase PH 351 101 Op 9 . + CDS 366506 - 367090 321 ## PROTEIN SUPPORTED gi|162456259|ref|YP_001618626.1| putative ribosomal protein 352 101 Op 10 . + CDS 367104 - 367952 838 ## COG1737 Transcriptional regulators + Term 368001 - 368037 0.1 + Prom 368029 - 368088 14.4 353 102 Op 1 . + CDS 368186 - 368914 747 ## COG2071 Predicted glutamine amidotransferases 354 102 Op 2 . + CDS 368942 - 370498 1838 ## COG2978 Putative p-aminobenzoyl-glutamate transporter + Term 370512 - 370572 13.5 + Prom 370565 - 370624 9.5 355 103 Op 1 8/0.000 + CDS 370681 - 372423 183 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 356 103 Op 2 1/0.171 + CDS 372410 - 374104 204 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 374124 - 374167 4.4 + Prom 374151 - 374210 10.2 357 104 Op 1 27/0.000 + CDS 374286 - 375794 2008 ## COG0286 Type I restriction-modification system methyltransferase subunit 358 104 Op 2 1/0.171 + CDS 375784 - 376266 265 ## COG0732 Restriction endonuclease S subunits + Prom 376868 - 376927 80.3 359 105 Op 1 . + CDS 376994 - 378019 1148 ## COG3943 Virulence protein 360 105 Op 2 2/0.000 + CDS 378106 - 379095 1084 ## COG0582 Integrase 361 105 Op 3 . + CDS 379107 - 379634 513 ## COG0732 Restriction endonuclease S subunits + Prom 380511 - 380570 80.4 362 106 Op 1 . + CDS 380630 - 380791 182 ## gi|317058591|ref|ZP_07923076.1| conserved hypothetical protein + Prom 380881 - 380940 5.5 363 106 Op 2 . + CDS 381111 - 384260 3665 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases + Term 384289 - 384353 16.4 - Term 384283 - 384334 7.6 364 107 Op 1 . - CDS 384358 - 385827 648 ## PROTEIN SUPPORTED gi|39938628|ref|NP_950394.1| ribosomal protein L13 365 107 Op 2 . - CDS 385839 - 386390 613 ## FN0534 hypothetical protein - Prom 386556 - 386615 6.5 + Prom 386346 - 386405 7.5 366 108 Op 1 . + CDS 386541 - 387185 600 ## FN1272 TetR family transcriptional regulator 367 108 Op 2 13/0.000 + CDS 387201 - 388472 1547 ## COG1538 Outer membrane protein 368 108 Op 3 27/0.000 + CDS 388488 - 389582 1602 ## COG0845 Membrane-fusion protein 369 108 Op 4 . + CDS 389605 - 392655 4151 ## COG0841 Cation/multidrug efflux pump 370 108 Op 5 . + CDS 392668 - 393051 541 ## FN1276 hypothetical protein 371 108 Op 6 . + CDS 393066 - 393596 645 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold 372 108 Op 7 . + CDS 393562 - 393945 364 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold 373 108 Op 8 . + CDS 393942 - 394898 864 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold + Prom 394900 - 394959 7.7 374 109 Op 1 4/0.000 + CDS 394985 - 396184 1450 ## COG0153 Galactokinase 375 109 Op 2 4/0.000 + CDS 396184 - 397677 1669 ## COG4468 Galactose-1-phosphate uridyltransferase 376 109 Op 3 . + CDS 397689 - 398678 1366 ## COG1087 UDP-glucose 4-epimerase 377 109 Op 4 . + CDS 398694 - 398978 406 ## Hac_1467 hypothetical protein 378 109 Op 5 . + CDS 399050 - 399439 804 ## COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase + Term 399464 - 399511 3.2 + Prom 399493 - 399552 8.9 379 110 Tu 1 . + CDS 399576 - 400745 1713 ## COG1301 Na+/H+-dicarboxylate symporters + Term 400761 - 400819 11.6 + Prom 400796 - 400855 8.9 380 111 Tu 1 . + CDS 400878 - 401684 933 ## COG3315 O-Methyltransferase involved in polyketide biosynthesis + Term 401778 - 401820 -0.6 381 112 Tu 1 . - CDS 401698 - 402918 650 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 403069 - 403128 12.7 + Prom 402927 - 402986 14.0 382 113 Tu 1 . + CDS 403188 - 406502 3928 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 406522 - 406558 7.5 383 114 Op 1 . - CDS 408072 - 409391 1431 ## COG1253 Hemolysins and related proteins containing CBS domains 384 114 Op 2 25/0.000 - CDS 409458 - 411188 2365 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) - Term 411203 - 411239 5.2 385 114 Op 3 . - CDS 411256 - 411519 465 ## COG1925 Phosphotransferase system, HPr-related proteins - Prom 411556 - 411615 7.6 386 115 Tu 1 . - CDS 411634 - 412656 1651 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases - Prom 412717 - 412776 9.5 + Prom 412676 - 412735 13.7 387 116 Op 1 30/0.000 + CDS 412775 - 413914 1303 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 388 116 Op 2 36/0.000 + CDS 413916 - 414761 890 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 389 116 Op 3 1/0.171 + CDS 414751 - 415527 727 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 390 116 Op 4 . + CDS 415616 - 416425 1168 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 391 116 Op 5 . + CDS 416425 - 416853 596 ## gi|257466185|ref|ZP_05630496.1| Heat shock protein + Term 416870 - 416930 9.5 - Term 416870 - 416907 5.1 392 117 Tu 1 . - CDS 416910 - 417623 699 ## COG2188 Transcriptional regulators - Prom 417728 - 417787 10.1 + Prom 417603 - 417662 17.5 393 118 Op 1 . + CDS 417775 - 419316 1792 ## COG1640 4-alpha-glucanotransferase 394 118 Op 2 1/0.171 + CDS 419288 - 420085 857 ## COG3568 Metal-dependent hydrolase 395 118 Op 3 . + CDS 420100 - 421674 2386 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 421681 - 421729 14.6 - Term 421666 - 421720 15.2 396 119 Op 1 1/0.171 - CDS 421730 - 422278 909 ## COG2096 Uncharacterized conserved protein 397 119 Op 2 . - CDS 422302 - 422757 653 ## COG0629 Single-stranded DNA-binding protein - Prom 422881 - 422940 9.5 + Prom 422822 - 422881 9.9 398 120 Op 1 1/0.171 + CDS 422912 - 425590 3316 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 399 120 Op 2 1/0.171 + CDS 425603 - 426493 921 ## COG1481 Uncharacterized protein conserved in bacteria 400 120 Op 3 1/0.171 + CDS 426504 - 427469 440 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 401 120 Op 4 1/0.171 + CDS 427438 - 428124 753 ## COG1354 Uncharacterized conserved protein 402 120 Op 5 . + CDS 428097 - 429566 546 ## PROTEIN SUPPORTED gi|163803542|ref|ZP_02197411.1| 30S ribosomal protein S20 403 120 Op 6 . + CDS 429566 - 431011 1578 ## COG1002 Type II restriction enzyme, methylase subunits 404 120 Op 7 . + CDS 431079 - 431759 763 ## FN0710 hypothetical protein 405 120 Op 8 1/0.171 + CDS 431770 - 432942 1577 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 406 120 Op 9 7/0.000 + CDS 432958 - 433497 565 ## COG2059 Chromate transport protein ChrA 407 120 Op 10 . + CDS 433494 - 434018 639 ## COG2059 Chromate transport protein ChrA + Term 434042 - 434089 2.5 - Term 433791 - 433826 2.8 408 121 Tu 1 . - CDS 433969 - 434964 1084 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 435006 - 435065 7.5 + Prom 434941 - 435000 13.2 409 122 Op 1 . + CDS 435096 - 435518 426 ## FN0788 hypothetical protein 410 122 Op 2 1/0.171 + CDS 435597 - 437108 2146 ## COG1288 Predicted membrane protein 411 122 Op 3 . + CDS 437133 - 438569 2128 ## COG2195 Di- and tripeptidases 412 122 Op 4 . + CDS 438594 - 439256 706 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 439261 - 439295 1.9 + Prom 439262 - 439321 6.7 413 123 Op 1 . + CDS 439354 - 441627 2748 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 414 123 Op 2 1/0.171 + CDS 441664 - 442452 923 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 415 123 Op 3 . + CDS 442442 - 443188 981 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 416 123 Op 4 . + CDS 443198 - 443884 702 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 417 123 Op 5 . + CDS 443885 - 446389 3073 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) + Prom 446604 - 446663 9.5 418 124 Tu 1 . + CDS 446738 - 448096 824 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 448173 - 448213 5.1 + Prom 448102 - 448161 8.2 419 125 Op 1 . + CDS 448239 - 449459 1540 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 420 125 Op 2 . + CDS 449472 - 450104 756 ## COG3022 Uncharacterized protein conserved in bacteria + Term 450116 - 450161 5.5 + Prom 450145 - 450204 10.6 421 126 Op 1 . + CDS 450226 - 450999 318 ## PROTEIN SUPPORTED gi|227550465|ref|ZP_03980514.1| ribosomal protein S4e 422 126 Op 2 . + CDS 451008 - 452159 1529 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 423 126 Op 3 . + CDS 452180 - 453226 1278 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 424 127 Tu 1 . - CDS 454712 - 454981 489 ## Ethha_1384 glutaredoxin - Prom 455061 - 455120 11.5 + Prom 455020 - 455079 6.8 425 128 Op 1 . + CDS 455104 - 456657 507 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 426 128 Op 2 . + CDS 456702 - 457073 194 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 427 128 Op 3 . + CDS 457102 - 458865 244 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 458868 - 458919 5.4 + Prom 458895 - 458954 8.3 428 129 Op 1 . + CDS 458984 - 459319 346 ## gi|257466223|ref|ZP_05630534.1| hypothetical protein FgonA2_02125 429 129 Op 2 . + CDS 459327 - 461060 1978 ## Ilyop_0658 hypothetical protein 430 129 Op 3 . + CDS 461063 - 462379 1058 ## COG0534 Na+-driven multidrug efflux pump + Term 462423 - 462489 30.0 + TRNA 462401 - 462477 82.6 # Pro TGG 0 0 + TRNA 462481 - 462555 71.6 # Gln TTG 0 0 + Prom 462482 - 462541 80.4 431 130 Op 1 . + CDS 462704 - 463507 975 ## COG0286 Type I restriction-modification system methyltransferase subunit 432 130 Op 2 . + CDS 463565 - 463846 89 ## SZO_12981 hypothetical protein 433 130 Op 3 . + CDS 463843 - 464397 630 ## COG4283 Uncharacterized conserved protein 434 130 Op 4 . + CDS 464446 - 464952 194 ## Apre_0714 hypothetical protein 435 130 Op 5 . + CDS 464987 - 465121 175 ## gi|257466230|ref|ZP_05630541.1| hypothetical protein FgonA2_02164 + Prom 465180 - 465239 4.2 436 131 Op 1 . + CDS 465274 - 466044 545 ## SEQ_0730 replication initiation protein 437 131 Op 2 . + CDS 466041 - 466889 402 ## COG1484 DNA replication protein 438 131 Op 3 . + CDS 466889 - 467377 539 ## SEQ_0732 hypothetical protein 439 131 Op 4 . + CDS 467374 - 468720 1405 ## COG3505 Type IV secretory pathway, VirD4 components 440 132 Tu 1 . - CDS 468744 - 468896 74 ## + Prom 468839 - 468898 2.0 441 133 Tu 1 . + CDS 468937 - 469155 125 ## CD1849 putative conjugal transfer protein + Prom 469169 - 469228 11.0 442 134 Op 1 . + CDS 469255 - 469866 382 ## HSM_1181 hypothetical protein 443 134 Op 2 . + CDS 469940 - 470779 580 ## COG4271 Predicted nucleotide-binding protein containing TIR -like domain + Term 470797 - 470838 6.1 + Prom 470792 - 470851 3.2 444 135 Op 1 . + CDS 470967 - 471278 404 ## CD1851 putative single-stranded DNA binding protein 445 135 Op 2 . + CDS 471282 - 471497 443 ## CD1852 putative conjugative transposon membrane protein 446 135 Op 3 . + CDS 471510 - 472373 896 ## CDR20291_1789 putative conjugative transposon membrane protein 447 135 Op 4 . + CDS 472386 - 472652 293 ## gi|257466239|ref|ZP_05630550.1| hypothetical protein FgonA2_02219 448 135 Op 5 . + CDS 472656 - 473054 373 ## SZO_12870 conjugative transposon membrane protein 449 135 Op 6 . + CDS 472957 - 475389 1295 ## COG3451 Type IV secretory pathway, VirB4 components 450 135 Op 7 . + CDS 475396 - 477690 1892 ## SEQ_0743 membrane protein 451 135 Op 8 . + CDS 477703 - 477939 344 ## 452 135 Op 9 . + CDS 477920 - 480136 2203 ## CD1858 putative cell surface protein + Term 480175 - 480216 7.3 + Prom 480141 - 480200 7.0 453 136 Op 1 1/0.171 + CDS 480230 - 481936 1304 ## COG0550 Topoisomerase IA 454 136 Op 2 . + CDS 481960 - 482955 784 ## COG0270 Site-specific DNA methylase 455 136 Op 3 . + CDS 482952 - 483338 385 ## SPG_1290 Tn5253 hypothetical protein + Prom 483343 - 483402 5.7 456 137 Op 1 . + CDS 483423 - 484028 344 ## MARTH_orf136 hypothetical protein 457 137 Op 2 . + CDS 484021 - 484263 307 ## MARTH_orf137 hypothetical protein + Prom 484288 - 484347 2.9 458 138 Op 1 . + CDS 484408 - 485028 333 ## MARTH_orf137 hypothetical protein + Term 485048 - 485081 2.5 459 138 Op 2 . + CDS 485101 - 492075 4811 ## COG4646 DNA methylase + Term 492082 - 492118 -1.0 460 139 Tu 1 . + CDS 492631 - 494301 1270 ## COG3344 Retron-type reverse transcriptase + Term 494325 - 494362 -1.0 + Prom 494327 - 494386 1.8 461 140 Op 1 . + CDS 494435 - 495790 1237 ## CD1862 putative conjugative transposon DNA recombination protein + Term 495791 - 495823 -0.9 462 140 Op 2 . + CDS 495842 - 496501 653 ## Smon_0655 hypothetical protein + Term 496506 - 496550 6.1 + Prom 496535 - 496594 5.6 463 141 Op 1 . + CDS 496651 - 496881 240 ## CD1864 putative conjugative transposon regulatory protein 464 141 Op 2 2/0.000 + CDS 496874 - 497935 1132 ## COG0270 Site-specific DNA methylase 465 141 Op 3 . + CDS 497954 - 499177 789 ## COG0270 Site-specific DNA methylase 466 141 Op 4 . + CDS 499191 - 500912 935 ## COG1401 GTPase subunit of restriction endonuclease 467 141 Op 5 . + CDS 500928 - 502130 379 ## Sca_2323 hypothetical protein 468 141 Op 6 . + CDS 502149 - 502976 803 ## Clole_2732 hypothetical protein 469 141 Op 7 . + CDS 502973 - 503500 375 ## gi|257466259|ref|ZP_05630570.1| hypothetical protein FgonA2_02329 + Term 503581 - 503622 5.0 470 142 Op 1 . - CDS 503502 - 504833 1037 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) 471 142 Op 2 . - CDS 504834 - 505193 228 ## Smon_0666 hypothetical protein - Prom 505386 - 505445 9.2 + Prom 505406 - 505465 7.5 472 143 Tu 1 . + CDS 505498 - 505762 270 ## COG1309 Transcriptional regulator Predicted protein(s) >gi|224531373|gb|GG658179.1| GENE 1 117 - 938 787 273 aa, chain + ## HITS:1 COG:FN1496 KEGG:ns NR:ns ## COG: FN1496 COG1792 # Protein_GI_number: 19704828 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Fusobacterium nucleatum # 92 273 10 194 210 127 41.0 2e-29 MKINRNNEGKRIRFTFILLGIICLFLLLFTNVSNYLKNRIENFFLPIQASLYQSKENISD NFETYLNRDQLFKENERLKLENNKLQFILRENKILLEENKRLTSLLEMKQSLTEKIQFAK VYFRKPENMYDQFYIDLGTKDGIKKNMIVSQGEKLIGRIVEVYENSSLVYMITKESIVVS AKSENHMFGVVKGIGEDKLYFEPNVYDDSLKVGDKIYTSGISDIYPGDMYIGYISEIEKG DNSLFTSITIRPSINISNLKEVLVIQSRRNYEN >gi|224531373|gb|GG658179.1| GENE 2 928 - 1503 562 191 aa, chain + ## HITS:1 COG:no KEGG:FN1493 NR:ns ## KEGG: FN1493 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 5 188 2 186 192 102 36.0 6e-21 MKIKKVLLICIFLLSSIFAFGKEYKAIEKVKNFSFEVAEINYLGKKQKKILYKVQMNLPN NFKKEILFPALNKGEIYLYTDKTKTVYLPMFDQKKTTSLEKDEVQVLNVIDILVERLSSD KKFKKAYYEKKNVEFVLEENYKVRIVSYLDVDGYVFPKKWLIEEKGQKVLELTLSKVVID PKLTERDFQIS >gi|224531373|gb|GG658179.1| GENE 3 1500 - 2159 544 219 aa, chain + ## HITS:1 COG:FN1492 KEGG:ns NR:ns ## COG: FN1492 COG1381 # Protein_GI_number: 19704824 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Fusobacterium nucleatum # 4 219 3 231 233 119 31.0 4e-27 MSKFIRNKAFVLGNYSFGEADRNLIVLTEDFGKIQLTVKGILKSKKRDKVATEALSYVDL LLYKKGEQFIISDFSSIENFMAIRQDLDSLSFAFYLLALVNRFVFEGYRVPKIFQLLKNS LYYLNREATKKKQLVLLNYFLFVLMKEEGIFRVDEILIHLNPEEKEIVECIWKKQMENIY KEDRYTEEKLLLLLKKLELYIKEKLDMDVSIEQYMMGGL >gi|224531373|gb|GG658179.1| GENE 4 2159 - 2638 739 159 aa, chain + ## HITS:1 COG:FN1491 KEGG:ns NR:ns ## COG: FN1491 COG1762 # Protein_GI_number: 19704823 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Fusobacterium nucleatum # 1 155 6 160 162 204 69.0 7e-53 MLNIVKITDYMSEDLICLDLTAKTKDEVLKELSTLMGKAPHIGTNSEVIYKALLEREKLG STGIGKGVAIPHAKTDAVEQLTIAFGISREKLDFKSLDEEEVNLFFVFASPNKDSHIYLK VLARISRFIREEEFRNTLLSCKTGKEVIECIREKEGVTL >gi|224531373|gb|GG658179.1| GENE 5 2635 - 3093 598 152 aa, chain + ## HITS:1 COG:FN1490 KEGG:ns NR:ns ## COG: FN1490 COG1327 # Protein_GI_number: 19704822 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Fusobacterium nucleatum # 1 150 1 149 149 174 63.0 8e-44 MRCPFCGSEDTKVVDSRSYLEGNSIKRRRECVVCQRRFSTFERVEEVPLYVIKKDQRRVP FNRDKVMRGLTFATVKRNIGREDLEKIVYEVEKNIQNTLKNEITTRDLGEMILEKLKKID QVAYVRFASVYKEFDDVKSFVELIEEMEREKK >gi|224531373|gb|GG658179.1| GENE 6 3095 - 4027 1352 310 aa, chain + ## HITS:1 COG:FN1489 KEGG:ns NR:ns ## COG: FN1489 COG0223 # Protein_GI_number: 19704821 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Fusobacterium nucleatum # 1 307 8 314 317 365 58.0 1e-101 MRILFMGTPDFAVSSLRKLQEEHEVIAVFTKIDKPNQRGKKIQYTPVKQYALEHNLEVIQ PKSVKDMEIIEKIKEYRPDLIVVVAYGKILPKEILEIPKYGVINVHSSLLPKYRGAAPIH ASIIHGEKESGVSIMYVVEELDAGPVLAQESVEILEEDNCESLHNKLQEIGASLLLKTIS KIEKQEIQAIPQDETKVSFVKPFQKEDCKIDWNQSAREIFNFVRGMDPFPGAFTLYHGKQ LKIGRVEEEKEMILEGKAGEILAFVKGKGIVVATGKGNVVITKAKPENKKMLSGVDLING NFLQEGEHFE >gi|224531373|gb|GG658179.1| GENE 7 4024 - 4884 1109 286 aa, chain + ## HITS:1 COG:Cj0855 KEGG:ns NR:ns ## COG: Cj0855 COG0190 # Protein_GI_number: 15792193 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Campylobacter jejuni # 1 281 1 280 282 263 51.0 4e-70 MKLLDGKKVAAEIKEELKRKIVEEKEKTGKIPGLGIIQIGHNEAASVYVQSQIKGSKALG IQAFLYAFEDDVKEEVVLQKIEELNQTEKIDGIILQLPLPEQISRSHILQAIDVNKDVDG FKTENMGRLHLGEEGFNPCTPEGVITLLKKYDIEIAGKNVTIIGRSNIVGKPMLGLFVNH DATVTICNSLTKNLKEHTLKADIIVVAVGKEKFLTADMVQEGAIVVDVGINRTVTGKIVG DVEFEEVSKKTSYITPVPGGVGSMTVAMLFQNIWKAFIKNRRIVND >gi|224531373|gb|GG658179.1| GENE 8 4877 - 5356 703 159 aa, chain + ## HITS:1 COG:FN1487 KEGG:ns NR:ns ## COG: FN1487 COG4492 # Protein_GI_number: 19704819 # Func_class: R General function prediction only # Function: ACT domain-containing protein # Organism: Fusobacterium nucleatum # 16 158 11 153 153 140 49.0 1e-33 MTKKAKENEKIHDGKRQYYIVDKTILSASIQKVIAVNEMVKNEHISKHEGIRRTGLSRST YYKYKDFIKPFFEGSQEKIFNIHMSLKDRQGLLAQILEVIADDKMNILTIVQNAAVDGIV QLTISLQGTAETPKNIETTLAKIQVIDGVRDLRILGSNS >gi|224531373|gb|GG658179.1| GENE 9 5369 - 5812 528 147 aa, chain + ## HITS:1 COG:VC0296 KEGG:ns NR:ns ## COG: VC0296 COG0511 # Protein_GI_number: 15640324 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Vibrio cholerae # 71 147 120 196 196 89 53.0 3e-18 MKLDLKTMEELAENMNTYQLDSIDLEVGGERFCLKKSISKEANITNVVKTMENAETIEMP VIEEKKEEILGKQIFSPMAGTIYRAPAPDKAPFVEEGMNVKVGDTLCIVEAMKMMNEVKS TESGIITKILAEDGVVVKKGEALFEIK >gi|224531373|gb|GG658179.1| GENE 10 5836 - 7119 1596 427 aa, chain + ## HITS:1 COG:FN1486 KEGG:ns NR:ns ## COG: FN1486 COG1253 # Protein_GI_number: 19704818 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Fusobacterium nucleatum # 1 423 1 426 426 498 65.0 1e-141 MDTYLYIVVLVILVLLSGFFSASETALTAFRSIHLEKFVDEKKDSIVVLLKKWLKDPNPM LTGLLIGNNIVNIMASSIATVVMVTYFGNTGKSILIVTILMTVAILIFGEITPKLIARNH SSEVAGKVISFIYYLTLFLNPLILILVFISKVIGRACGVNMDNAGVMITEEDIISFVNVG QEEGIIEEDEKEMIHSIVGFGETTAKEVMTPRTSMTAFEGSKTIEDIWDTLMEDGFSRIP VYEETIDNILGILYIKDIMSQVKNGNINQPIRELVRPAYFVPETKSIIEILKEFKVKKVH IAMVLDEYGGIGGLLTIEDLIEEIVGEIRDEFDEEEEEFVRKVGDHSYEVDAMIDIETLD KELGIQLPVSEDYESLGGLITTELGRVTEKGDELELENVKLQVLEMDKMRISKVLITCEK EEEPKEE >gi|224531373|gb|GG658179.1| GENE 11 7116 - 7439 404 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257465823|ref|ZP_05630134.1| ## NR: gi|257465823|ref|ZP_05630134.1| hypothetical protein FgonA2_00055 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 107 1 107 107 169 100.0 5e-41 MKKFLGIVFLVILSQGIYAQEQSWEYPFIKALNYEERQEWNLAIEELEKSRALQEENLFV LKELGYCYAKQGEWEKAKECYEKVLFFYPEDSNAKKNLEILLENKTK >gi|224531373|gb|GG658179.1| GENE 12 7450 - 7962 761 170 aa, chain + ## HITS:1 COG:FN1483 KEGG:ns NR:ns ## COG: FN1483 COG0503 # Protein_GI_number: 19704815 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Fusobacterium nucleatum # 1 170 1 170 170 291 80.0 5e-79 MDLKKYVARVENFPKEGIIFRDITPLMNDGEAYQYATEKIVEFAREHQVELVVGPEARGF IFGCPVSYALGIGFVPVRKPKKLPREVVSYAYDLEYGSNTLCMHKDSIKPGQRVLIVDDL LATGGTIEASIHLIEELGGVVAGIAFLIELEELKGREKIKQYPILTLMKY >gi|224531373|gb|GG658179.1| GENE 13 7979 - 10156 2377 725 aa, chain + ## HITS:1 COG:FN1482 KEGG:ns NR:ns ## COG: FN1482 COG0317 # Protein_GI_number: 19704814 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Fusobacterium nucleatum # 2 724 3 725 725 996 68.0 0 MSYWDSFVECVRQNHLEIDLDKVKLAYYLAEESHEGQYRKSGEAYIMHPIEVAKILVGLK SDTDTIIAAILHDIVEDTFITLADIEYNFGKNVAHLVDGVTKLKSLPNGTKNQSENIRKM ILAMTQNLHVILIKLADRLHNMRALKFMKPEKQIAIAQETLEVYAPLAHRLGIAKIKWEL EDLCLYYLHNDKYLEIRSLIDKKKDERKDYIDSFIQTMTRILSDVGIKGQVKGRFKHFYS IYKKMYELGKEFDDIYDLMGVRIIVSNTSDCYHVLGEVHSRYTPVPGRFKDYIAVPKSNN YQSIHTTIVGPLAKFIEIQIRTEEMDKVAEEGVAAHWAYKEKRKTNKDDQIYGWLRNIIE LQQNTSNTEDFVKSVTADIKNDTIFVFSPKGDIVELPNMATTLDFAFAVHTQVGCRCIGA KVNGKIVPLDTKLQNGDRVEIITSKNSKGPSKDWLEIVRTHGAKSKIRKFLKDVNAEEIT KAGRESLEKELVRLGMSLKDLDTDSIILKHMEKNNIKSMEEFYYHVGEKRSKLEIIISKL RSKIEKEKVASEIKLEDIMTKKEEKPSRGKNDFGIVIDGINNTLIRFAKCCTPLPGDEIG GYVTRLTGITVHRKDCMNYQSMLKMDPSREIIVSWDEKLIHTKANKYNFGFTVFVNNRDG ILMDVVNVISNHKIHISSVNSHEINREGKLLASLKFTIEINDKEEYNQLINNISKIRDVL SIERD >gi|224531373|gb|GG658179.1| GENE 14 10168 - 11307 1267 379 aa, chain + ## HITS:1 COG:FN1481 KEGG:ns NR:ns ## COG: FN1481 COG0343 # Protein_GI_number: 19704813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Fusobacterium nucleatum # 3 371 2 370 373 648 83.0 0 MKKLPVTYTLEMTDGKARAGKIQTPHGIIETPVFMPVGTQATVKAMTKEELDDIGTQIIL GNTYHLFLRPGDDLIDRLGGLHQFMSWKKPILTDSGGFQVFSLGALRKIKEEGVYFSSHI DGSKRFISPEKSIEIQNHLGSDIAMLFDECPPGLSTREYLIPSIERTTRWAKRCVEAHQK ADKQGLFAIVQGGIYEDLRQKSLEELLEMDEHFSGYAIGGLAVGEPREDMYRILDSIVEK CPENKPRYLMGVGEPIDMLEAVESGIDMMDCVQPTRIARHGTVFTKHGRLVIKNAEYAED TRALDEECDCYVCRNYSRAYIRHLLKVDEILGARLTSYHNLYFLVQLMKDAREAIKKGEF QKFKKEFIDKYNINIHRRK >gi|224531373|gb|GG658179.1| GENE 15 11313 - 11678 677 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257465827|ref|ZP_05630138.1| ## NR: gi|257465827|ref|ZP_05630138.1| hypothetical protein FgonA2_00075 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 121 1 121 121 149 100.0 7e-35 MKKFLLLAVLALGLVACGQKEEAKVEEATQVEQAVETPAAEEQVITFTREDGEANIVVKS SDNFETATIVIEDQEYAAKRVEAADGVKVATEDEKISVHFKNDYGVLEMDGTEVNLTVVK E >gi|224531373|gb|GG658179.1| GENE 16 11760 - 12230 732 156 aa, chain + ## HITS:1 COG:FN1373 KEGG:ns NR:ns ## COG: FN1373 COG2606 # Protein_GI_number: 19704708 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 155 1 155 162 176 63.0 1e-44 MKKTNAMRELDKAKIQYQYYEYEVDENHLGAIDVALKTGQDITRIFKTLVLVNEKKEMIV ACIPGSDTIDLKKLAKVSSSKKVEMIEMKQLLPMTGYIRGGCSPIGIKKKHRTFLHSSAR NKESIIVSGGMRGLQIELATEDLIAYVGMEVEDIIV >gi|224531373|gb|GG658179.1| GENE 17 12620 - 14251 1264 543 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 2 537 3 538 545 446 48.0 1e-123 MKKIPIGIEDFKMLITDDYFYIDKTKFIEEILNDGSLVKLFTRPRRFGKTLNMSMLKNFF DIRGAEENKKLFDSLYIEKSPVFAEQGKYPVIFISFKGLIGDTLEKLIDSLKVKISKLFA EYRDLIEKLDKFDTALFEKMILREDISEAELSESLLTLTDILYRYYKKQVIVLIDEYDAP LTYAYGQGYYKEAVDFFKTLYGNVLKTNSNLKMGVLTGAIRVAQAGIFSDLNNIETHTIL DEAYDEYFGLLENEVENILIEYKSEDKLEDVKSWYDGYKFGNMEVYNPWSILRYVKYKKL DAYWINTSGNALIKELLLLSDGTVFEDLDNLVNGQEKNIYVNESIALGNDLDPNRIWEIM LFSGYLTVKEKISNESYLIKIPNKEIQSFFKGLFAEIVFKGKSNITSMKAALENKDINTI IRILEKVVLNAISFYDTNKKLENPYQTLLAGFLYALDDYYEMKPNPETGYGRADIILKPR NKKWIGYIFELKRAKTKNLEKEAEKALEQIEEKKYDTILISEGIKEIIKIGLVFDGKKAV AYY >gi|224531373|gb|GG658179.1| GENE 18 15180 - 16835 1853 551 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0945 NR:ns ## KEGG: Lebu_0945 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 4 550 3 552 552 501 49.0 1e-140 MEQKKGLPNGISDFKLLREENYYYIDKTNLIEELQQEIGKTILFTRPRRFGKTLNMSMLQ YFWDIHNAEANRKLFQGLYIESSPYFSEQGKYPVIYLSFKDLKSKSWKDCLEDIKLFIQN LFYQYRHILPKLDSFANARFSKCIKGDSNLAELKFSLKFLTELLSFHYQTKVVLLIDEYD TPIISAYEHGYYEEAISFFRTFYSAALKDNEYLQMGIMTGILRVAKEGIFSGLNNLVVYS ILDEKYSSYFGLTEEEVEEALKYYHMEYNLQEVKEWYDGYRFGNTEIYNPWSIINYISNR KLDAYWINTSSNGMIHQVLEMAERIGSSIFQKLEMLFQQKTIIQRINKGSDFHDLVNMDE IWQLFLHSGYLTINDNEKDNMYELRIPNKEVYSFFQESFIQKFLGNYTTFHSLLRSLEKG DVKELEQTLEEILLSSVSYFDLSKESEKFYHVFMIGLVANFQERYYIKSNRESGEGRYDL ALEPRDRRKTGLLLEFKVANSEEELDKKAKEALLQIQEKRYDTEMQERGIQEIVKLGIAF CGKRVKVITKE >gi|224531373|gb|GG658179.1| GENE 19 16873 - 17649 849 258 aa, chain - ## HITS:1 COG:FN1973 KEGG:ns NR:ns ## COG: FN1973 COG0251 # Protein_GI_number: 19705269 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Fusobacterium nucleatum # 133 258 3 128 128 202 83.0 3e-52 MGAGKISFRKACTLKKYGAIIEIVAKDISKEFETLSNLQIRKKSYDEKDIQGHFLVIAAT NNSVLNHQIVEDCKKRNILVNNISSKEDMTCRFASIYEEEEYQIAISAHGYPKKSKQLRE EIKQYLIQRSDVRMKKIIHTEKAPAALGPYSQAIEANGVLYVSGQIPFVPATMTLVSDDV QAQTRQSLENIGAILAEAGYTFNDVVKASVFIKDMNDFTKINEVYNEYLGEAKPARACVE VARLPKDVKVEIEVIATK >gi|224531373|gb|GG658179.1| GENE 20 17708 - 19009 1374 433 aa, chain - ## HITS:1 COG:FN0540 KEGG:ns NR:ns ## COG: FN0540 COG0001 # Protein_GI_number: 19703875 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Fusobacterium nucleatum # 4 431 4 430 434 596 67.0 1e-170 MKQENSKKYFEEACQYIPGGVNSPVRAFQSVHREAPIFAKKAKGAYLWDEDNNRYLDYIC SWGPMILGHNPDFVLQGVQEAILSGSSFGLPTQKEVELAKLIVQSVPCIEKVRLTTSGTE ATMSAVRLSRAYTKRNKIIKFEGCYHGHSDALLVKSGSGLLTQGFQDSNGIPQSVLQDTI TIPFGNKEKTLEYLQTKEIACIIVEPIPANMGVIESQKDFLQFLREETQNYGSLLIFDEV ISGFRVALGGAQEYFKITPDLCTLGKIIGGGYPVGAFGGKEEIMNLIAPLGQVYHAGTLS GNPISVRAGYETLSYLMQHKSSIYLNITKKTEFLVKEIEKLIQKYEIPAVVQSMPSLFTI FFSKKEKVTNLEDALSSNVDFFTIYFNTLLENGILAPPSQFEAHFISHAHSEDDLKKTLK VIELAFQKIHEVM >gi|224531373|gb|GG658179.1| GENE 21 19006 - 19983 1247 325 aa, chain - ## HITS:1 COG:FN0460 KEGG:ns NR:ns ## COG: FN0460 COG0113 # Protein_GI_number: 19703795 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Fusobacterium nucleatum # 1 320 1 320 322 444 64.0 1e-124 MFQRTRRLRSSAILREMLQNVHLSLQDLIYPIFVEEGENKKEEISSMPGQYRYSIDRLPE LLEDCRELGIKALLLFGIPNHKDEVGSEAYHSHGIVQKALQFIKENYGDQFLLITDVCMC EYTSHGHCGILHEKEVDNDTTLQFLSKIALSHAQAGADIVAPSDMMDGRVQAIRATLDEN GFSYIPIMAYSVKYASSFYGPFRDAADSAPSFGDRKSYQMDFQNDKEFYQEVLSDMEEGA DFIMVKPGMPYLDVLHAVKERISLPLVSYQVSGEYSMIKAAALQGWIDEKKIVLESMLAF KRAGADLIITYYALEIAAWLKENRK >gi|224531373|gb|GG658179.1| GENE 22 19967 - 21445 1510 492 aa, chain - ## HITS:1 COG:FN0644_1 KEGG:ns NR:ns ## COG: FN0644_1 COG0007 # Protein_GI_number: 19703979 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Fusobacterium nucleatum # 2 245 3 246 251 343 68.0 5e-94 MKKKVYLVGAGPGDAGLFTLKGKQLLEEADCIIYDRLIPMEILNFAKKDAELIYLGKENT EGGLLQEKINHRLIEKALEGKMVVRLKGGDSFVFGRGGEEILALVEQGIDFEVVPGITSS ISVPAYAGIPVTHRDVARSFHVFTGHTMKDGTWHNFEVLAKLEGTLVFLMGVKNLDKIVN GLIQYGRDPETPIAIIEKGATEQQKVHVGTLKNIVTLAKERDVKAPAIIIIGEVVSLQEK LNWFEATKKKKILVTRDIKQAPDFSEKLQKHGFFPIEFPLLEIQKHTLSFLKDFFQKYSV ILFNSPNGIRYFLEAIPDLRMIAHCKIGVVGRKTREVAESYKLIPDFMPKEYCVHELAKL SKEYSQEGDHILIFTSDISPCDCEKYSKEYNRKYEKFVLYSTSKKEYSKEEMEQKIKEVD IITLLSSSTVEALYENLEGDLSILEGKQIASIGPVTSKTLRKYGFTVDYEATIYDTNGLV EILKEANNVSKN >gi|224531373|gb|GG658179.1| GENE 23 21464 - 22363 815 299 aa, chain - ## HITS:1 COG:FN0645 KEGG:ns NR:ns ## COG: FN0645 COG0181 # Protein_GI_number: 19703980 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Fusobacterium nucleatum # 3 295 2 293 298 382 66.0 1e-106 MSKQQIILGSRGSILALAQTNWVKEQLEKYHPELSFSIQIIETQGDKDLHSHFGNSQSSL KSFFTKEIEKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPLAE LPQGAIIGTSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKRVK LEEKITEYLDPTIFPPAPAQGALYIQCREKDTEVQKILQSIHNENLEKVLVVEREFSKIF DGGCHTPMGCYSNLQGDTLEFFAMYSHENKRYQTKVVENLSKGKDIARMAAQEIEKMFK >gi|224531373|gb|GG658179.1| GENE 24 22375 - 23367 1010 330 aa, chain - ## HITS:1 COG:FN0646 KEGG:ns NR:ns ## COG: FN0646 COG0373 # Protein_GI_number: 19703981 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Fusobacterium nucleatum # 1 328 2 329 329 332 56.0 7e-91 MNIKNFAVIGISHEILSMQEREEVIKQKPRVLFEELFQAGDIKAYVDLSTCLRVEFYLEL EENKSLEDIQKRFPVQKGLQSKQGEEALLYLAKVVCGFFSVIKGEDQILAQVKQAYAKAL EEEHSSKLCNIIFHKIIELGKKFRSKSNIAHQALSLEAISLRSIRERVPFLQNKKILLLG IGELAQSILALLVKENLSNIYITNRSYHKAEEVSNIYQVNMIDFREKYQWIAEADIIISA TSASHIVLEYEKFLQYKQDKEYFMLDLAVPRDIDPRIADLEKIEVLNLDDIWKISKEHSC FREQLLEDYFYILEEQIESIHKALSYYEQK >gi|224531373|gb|GG658179.1| GENE 25 23528 - 24397 240 289 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 74 277 82 278 285 97 33 1e-18 MHKYIVEPEYDGYEIGEYLKESKGYSGRGLRKLEIYLNGKKIKNTAKKVRKLNRVFIVEK EKETGIRPMDIPLEIVYEDENLLILNKQANLVTHPTTKKVDATLANGVVAYFLKTTGKTM VPRFYNRLDMNTTGLIIVTKNAYSQAYLQEKTEVRKSYQTIVKGIVEQDEFYITKPIGKV GEDLRRIELAVSEGGQEAKTFVKVLKRFPERNRTLLDVTLFTGRTHQIRAHLSLEGYPIV GDDLYGGADDRIKRQLLHAYRLTFQNPKNGEQQEIMIDLAKDMQDYLNG >gi|224531373|gb|GG658179.1| GENE 26 24547 - 25551 1744 334 aa, chain + ## HITS:1 COG:FN0652 KEGG:ns NR:ns ## COG: FN0652 COG0057 # Protein_GI_number: 19703987 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Fusobacterium nucleatum # 1 327 1 327 335 567 90.0 1e-162 MSVKVAINGFGRIGRLALRVMSENPEYDVVAINDLTDAKTLAHLFKYDSAQGRFQGTIDV TEEGFVVNGDSIKVFAKANPEELPWKELGIDVVLECTGFFTSKEKAEAHIKAGAKKVVIS APATGDLKTVVYNVNHDILDGSETVISGASCTTNCLAPMAKVLNDNFGIVEGLMTTIHAY TNDQNTLDAPHKKGDLRRARAAAANIVPNTTGAAKAIGLVIPELKGKLDGAAQRVPVITG SITELVTVLEKSVTVEEINAAMKAAANESFGYNDEDIVSSDVIGCRFGSLFDATQTRVMT VGDKQLVKTVSWYDNEMSYTSQLIRTLGAVTKAK >gi|224531373|gb|GG658179.1| GENE 27 25614 - 26813 1959 399 aa, chain + ## HITS:1 COG:lin2552 KEGG:ns NR:ns ## COG: lin2552 COG0126 # Protein_GI_number: 16801614 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Listeria innocua # 1 399 1 396 396 576 77.0 1e-164 MAKKNIKDLELQGKKVLMRVDFNVPMKDGKITDENRIVAALPTIQYALEQGAKVIAFSHL GKVKTEEDLVSKSLKPVAVRLSELLGKEVKFVAATRGAELETAVNSLQNGEIMMFENTRF EDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHRAHASNVGISSNIGEGKSAAGFLME KEIRFIGGAVDAPERPLVAILGGAKVSDKIGVIENLLEKADKVLVGGAMMFTFLKALGKS TGTSLVEEDKVELAKALLEKANGKLILPVDTVVAKEFNNEAAHRTVSVDEVPADEMGLDV GAGTVELFSKEIASAKTVVWNGPMGVFEMPNYAKGTIGVCEAIAHLQGATTIIGGGDSAA AAISLGYADKFTHISTGGGASLEYLEGKVLPGVASISEK >gi|224531373|gb|GG658179.1| GENE 28 26876 - 27037 209 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257465840|ref|ZP_05630151.1| ## NR: gi|257465840|ref|ZP_05630151.1| hypothetical protein FgonA2_00140 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 53 1 53 53 90 100.0 3e-17 MTAQKKIQYLSILLIVCAFASAIFMKTNTEEVYEGTAKGFHGDIHVQVAAHSK >gi|224531373|gb|GG658179.1| GENE 29 27009 - 27239 423 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315916998|ref|ZP_07913238.1| ## NR: gi|315916998|ref|ZP_07913238.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 76 13 88 88 127 100.0 2e-28 MYKWQHIRNDGNAIEITDIQVKHEDTPDIGGVAISDLVEKVKAEQSVEVEMVAGASYSSQ GFLEAVKEAVAKVPEK >gi|224531373|gb|GG658179.1| GENE 30 27303 - 28250 1039 315 aa, chain + ## HITS:1 COG:FN0623 KEGG:ns NR:ns ## COG: FN0623 COG0679 # Protein_GI_number: 19703958 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Fusobacterium nucleatum # 1 315 4 318 318 273 50.0 3e-73 MENLILAINVVLPILIILTIGYVLKYFNMVDTHSLNKMNSLVFRVFMSSLLFINIYRLDA EAVFQLKNLRFILFPVLGVFCMIFLSYLVYSRTIKDSKKCSVMIQAAYRGNFVLFGIPIA STLYGEEALGITSLLLAAVIPTFNLTAILLLEFYRGEKIKLSKLVSSTYKNPLLLASTLA IICLLLDIHIPNILEVTISSLAKVATPLAFIVLGGSLEMKSVKKHWKYLLTANVVKLMVF PFLLIVASHFLSFTSMEITAFLAATACPAAVASFTMAKEMDADGDLAGEIVVTTSAFSIV TIFFWVLILKNIAWI >gi|224531373|gb|GG658179.1| GENE 31 28429 - 29214 1039 261 aa, chain + ## HITS:1 COG:FN0228 KEGG:ns NR:ns ## COG: FN0228 COG1349 # Protein_GI_number: 19703573 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Fusobacterium nucleatum # 1 254 4 257 258 280 66.0 2e-75 MLSSERYQFIVQYLEEHNSATRKELADLLGVTSMTIGRDLKKLEQKGYLVCTYGGAILPN SLVEEKKYDRKKEENTKIKKRIAEKALEEIRSNMTIILDAGTTTYELACLIAQSSIQNLR VITNDLYIALELYQKENIKLILLGGEVARETGATTSVLSIKQIENYNADIAFLGISSISD NLDITVPTEVKVILKRSIMKISEKNILLTDYSKFGKKKLYKAAHIKNFDSIITDHIFSKK EIEKYGLEKKIIQVDGKDKTI >gi|224531373|gb|GG658179.1| GENE 32 29224 - 30501 1399 425 aa, chain + ## HITS:1 COG:FN0227 KEGG:ns NR:ns ## COG: FN0227 COG3395 # Protein_GI_number: 19703572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 425 1 425 425 536 68.0 1e-152 MAKYIIVADDLTGSNATCSLLKKVGLRAASIFQLPKTKIETTDVISYSTDSRGISKEEAY ERVKDAVSFLKSEETLLYNKRIDSTLRGNIGSEMDAMLEQLEEDRIAVVVPAYPDSGRIV VNKIMLVNGILLENSDAGRDPKTPVNTSCVEELIQKQSKYSSHYFSLQDIAKEEEKLVKE IELYGKENRVLIFDAVTNEDIIKIARLMNRSNLKIITVDPGPFTMYYTKELQKKNNLEKK ILMVIGSATETSKKQIEHILQHEEIFLEKMNPNNFFVEESRQQEIQRVVSMIKKGIDSYD LFLITTTPIGNDEKLNLPEIAKMKGVSVEEISKIISNTLTEAATLVLEEVQKFEGVYSSG GDITLALLEKLNSIGVEIKEEVIPLAAYGRLIGGKFSNMKLVSKGGMVGKEDTIKLCLNQ MKSDI >gi|224531373|gb|GG658179.1| GENE 33 30516 - 31514 419 332 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 6 322 9 323 346 166 33 2e-39 MNKPKIAVPMGDPAGVGPEIVVKTAVAEEIRDLCDLVVIGDRKVLEKAIEICGVNLQIHS MEKVEDGDYRDGILNVIDLHNIDLNIMEYGKVQGMCGKAAFEYIKKSVDLAMSHQVDAIA TTPINKESLRAGNINYIGHTEILGDLSNSRDPLTMFEVANMRVFFLTRHMSLRNACDAIT KERVLEYIQRCTKALKQLGVNGKMAVAGLNPHSGEHGLFGYEEVEEVTPAVEEAQKLGYD VVGPIGADSVFHQALQGRYQAVLSLYHDQGHIATKTYDFERTIAITLDMPFLRTSVDHGT AFDIAGQGIVSAISMIEAVRLAAKYAPNFKNI >gi|224531373|gb|GG658179.1| GENE 34 31546 - 32904 2013 452 aa, chain + ## HITS:1 COG:FN0225 KEGG:ns NR:ns ## COG: FN0225 COG2610 # Protein_GI_number: 19703570 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Fusobacterium nucleatum # 1 440 1 440 452 592 81.0 1e-169 MEQQILLGLFIGILCLIFMIMKTKIHTFLALIIATILVGLIGGVEYSKIIESITKGFGGT LGSIGIIIGFGVMMGQLFEVSGAAKKMALTFLKIFGKGREELAMAITGFLVSIPIFCDSG FVILTPLLKAISKETKKSIVSLGLALATGLVITHSLVPPTPGPVGVAGIFGVNVSSIILW GIVIAAPMMMASLLFAKFSGNKIWQIPTEDGGWTRDRNYIYKGEQEKVFDEDSLPSTFLA FSPIVVPILLILLGTISKTMSLTGKMIDFIQFVGTPVLAVGIGLILTIYGLAKNMDRKSM MEEVETGIKSAGTIILITGAGGAFGMLIRDSGVGDIIANSLVETSLPAILLPFVIATLVR FVQGSGTVAMITAASITAPIIAKLDVNPVFAALAACIGSLFFSYFNDSFFWVINRSIGIT EGKEQLRLYSIASTVAWAVGIVVLLIVNMIFG >gi|224531373|gb|GG658179.1| GENE 35 32940 - 33908 1279 322 aa, chain + ## HITS:1 COG:FN0903_1 KEGG:ns NR:ns ## COG: FN0903_1 COG0794 # Protein_GI_number: 19704238 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Fusobacterium nucleatum # 4 207 3 206 206 270 65.0 4e-72 MLENQEILAIAHGIIDTEIQGLEKLKASMGQELIEAAKIIYESKGKLIITGIGKTGAIGK KIAATLSSTGTTTIFMNSTEGLHGDLGMVNPEDIVIGISNSGESDEILHIIPAIKNIGAR VFAMTGNPNSRLAQEAEIVLFCGVDSEGCPLNLAPMASTTSALALGDALAGILMKMRDFQ PQNFAMYHPGGSLGRRLLSRVKNLMKTGEDLALCSLDTKMKDVIVKMNEKRLGILCVMKG EELVGIITEGDIRRALSREEEFFTFHAEEIMTKQYKKVEQDMLANEALSYMEEGKYQISV MPVFHEGKFVGVVRIHDLLKIK >gi|224531373|gb|GG658179.1| GENE 36 35422 - 35904 708 160 aa, chain - ## HITS:1 COG:BH2241 KEGG:ns NR:ns ## COG: BH2241 COG0780 # Protein_GI_number: 15614804 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Bacillus halodurans # 3 160 8 165 165 254 75.0 4e-68 MRETENLSFLGNQNTKYPQDYAPEMLETFENKHPDNDYFVKFNCPEFTSLCPITGQPDFA NIVISYVPNIKMVESKSLKLYLFSFRNHGDFHEDCMNIIMKDLIKLMNPKYIEVWGKFTP RGGISIDPYCNYGQKGTKWEEIAFHRMANHDMYPEKVDNR >gi|224531373|gb|GG658179.1| GENE 37 35905 - 36600 979 231 aa, chain - ## HITS:1 COG:AF0442 KEGG:ns NR:ns ## COG: AF0442 COG0603 # Protein_GI_number: 11498054 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Archaeoglobus fulgidus # 1 225 1 215 239 169 44.0 4e-42 MKVLVLLSGGLDSTTCLAIAVDKYGADQVVALSASYGQKHTKEILSARAIAKYYQVELLE LNLSKIFSYSNCSLLSHSTEEVPHHSYAEQLNQQEEEILSTYVPFRNGLFLSTAASIALS KECSIILYGAHSDDAAGNAYPDCSPAFNEAMNTAIYEGSGRQVKVEAPFIGLHKKDIVKL GLTLQVPYELTWSCYEGKEHSCGECGTCIDREKAFEENGTIDPLVKIRGGK >gi|224531373|gb|GG658179.1| GENE 38 36609 - 37184 840 191 aa, chain - ## HITS:1 COG:CAC3626 KEGG:ns NR:ns ## COG: CAC3626 COG0302 # Protein_GI_number: 15896860 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Clostridium acetobutylicum # 2 187 3 189 195 238 63.0 4e-63 MIDKKAIQEHVKGLLLALGEDPNREGLLETPKRVANMYEEIFEGIQYSNQELATMFGKTF EGDSETNSDDMVIIRDIEIFSVCEHHLALMYDMKVTVAYIPNKKLLGLSKVARICDMVGK RLQLQERIGRDIAEIMQKVTDSEDIAVLIQGKHSCMTMRGIKKQQSITETSCFLGKFKEN LVLQNRLYQRL >gi|224531373|gb|GG658179.1| GENE 39 37185 - 37853 175 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel] # 3 214 17 222 225 72 29 4e-11 MPKYKVVEIFESINGEGKKAGQLALFIRFQYCNLNCSYCDTKWANSKNSPFTWMSLEEIL SLAKEKRIKNITLTGGEPLLQTDIRSLLEAFSKEKQFEIEIETNGSVPLETFRNIENSPS FTIDYKLPESHMEEYMSLENFSSVHRNDTVKFVVSNRKDLEKAKEIIEQYSLIGKCAVYF SPVFGKIALPSIVDFMKEHHLNGVNMQLQMHKFIWDPEEKGV >gi|224531373|gb|GG658179.1| GENE 40 37855 - 38283 478 142 aa, chain - ## HITS:1 COG:CAC3624 KEGG:ns NR:ns ## COG: CAC3624 COG0720 # Protein_GI_number: 15896858 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Clostridium acetobutylicum # 1 141 1 136 136 160 57.0 6e-40 MYTLSSEASFDSAHFLKDYIGKCRNIHGHRWKVKIEIYAENLQSDGGFRGMVLDFGDIKK ELKEITNYFDHAFILEKNSLKPSLFNALVEEGFRLIEVDFRPTAENFSKFFYEHFEKKGF PVLQATVYETPNNCASYSKGVR >gi|224531373|gb|GG658179.1| GENE 41 38480 - 39274 918 264 aa, chain - ## HITS:1 COG:VCA0581 KEGG:ns NR:ns ## COG: VCA0581 COG0501 # Protein_GI_number: 15601340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Vibrio cholerae # 1 253 1 246 263 123 31.0 4e-28 MKKKSIKIFFLVLFSSFLIACTSTAPLTGRNQLKLVSDESLVARSVHSYNQLIQQARQQG KLANNTNNGRRLNMIGKRVASAVERYMYTNGMGDRVRYLNWEFNLIDSKEINAFAMPGGK IAFYSGIIPVLQTDARIAFVMGHEIGHVIGGHHAEGYSNQQLAGLATTLTNVMVGGAASS LVSDGLSLGLLKFNRTQEYEADKYGMIFMAMAGYNPAEAIQAEARMAALSENSGSDFLST HPANDKRIAALKAFLPEAMKYYQK >gi|224531373|gb|GG658179.1| GENE 42 39396 - 39650 464 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLLVLLALMLGLVACGQKEEAAPAEEQTAVEQAAETVEEAATEATETVEQAAEATTEA AADAADAVKDAAADVKEAATTDKQ >gi|224531373|gb|GG658179.1| GENE 43 39937 - 40503 733 188 aa, chain + ## HITS:1 COG:FN0913 KEGG:ns NR:ns ## COG: FN0913 COG2087 # Protein_GI_number: 19704248 # Func_class: H Coenzyme transport and metabolism # Function: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase # Organism: Fusobacterium nucleatum # 1 188 1 187 187 205 52.0 4e-53 MGRIVYFTGGARSGKSAHSEQYILDRHYDHKIYLATAIVFDEEMKERVKLHVERRGKEWD TLEAYRNLYEVVKTSMKEATRGVILLDCITNMISNLLLDEQEDWDNISQERVQELEKYIL EEISTFLEEIKKTSYDLVVVSNELGMGLVPPYPLGRYFRDICGRANQLVADEAQESYFIV SGTKLRLK >gi|224531373|gb|GG658179.1| GENE 44 40523 - 41329 964 268 aa, chain + ## HITS:1 COG:FN0912 KEGG:ns NR:ns ## COG: FN0912 COG0368 # Protein_GI_number: 19704247 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Fusobacterium nucleatum # 1 256 1 271 278 194 47.0 2e-49 MKGLILLFSFMTRLPVPKMEFDSEELGKSMKFFPVVGLVIGLILYLFARGISFVTGSSFP FLLSVLVLLLEVAITGALHLDGLADTFDGMFSYRSKQKILEIMKDSRLGTNGALALIFYF LLKWSIFAELFYTLGKNYFAIFLVTMPIIARLGSVIHCAFFPYARGTGMGKAFVDYTGKK ELAFSVVLTGVLLAILWYFSKALPLIVALGVSCLILILFQYLFGKLVQHKIGGITGDTLG ALVELSEVMYGFILYVCINAMDWIIFYI >gi|224531373|gb|GG658179.1| GENE 45 41344 - 41925 685 193 aa, chain + ## HITS:1 COG:FN0911 KEGG:ns NR:ns ## COG: FN0911 COG0406 # Protein_GI_number: 19704246 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Fusobacterium nucleatum # 1 192 1 190 191 205 54.0 4e-53 MGKIILVRHGQTQMNADRIYFGKLNPPLNPLGKIQAHEAKKRLETEITSYDFIHASPLER TKETAEIVNFLGKRISFDERLEEINFGIFEGLKYHEIVERYPKEYEESVTNWKTYHYETG ESLETLQKRVIEYIFSLDLEKDHLIVTHWGVICSFLSYVMSENLESYWKFKILNGGVVIL EVKDNFPVLAKLL >gi|224531373|gb|GG658179.1| GENE 46 41938 - 42996 1199 352 aa, chain + ## HITS:1 COG:FN0910 KEGG:ns NR:ns ## COG: FN0910 COG2038 # Protein_GI_number: 19704245 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Fusobacterium nucleatum # 4 349 7 352 354 422 58.0 1e-118 MKGLEDIFVGIQGKNIQSMEITKDILNKKMKPEGSLGILEELVQKIAGIYSYPLPKIQKK CHIVAVADNGIIEEKVSSCPLEYTRLVSEAMLHNIATIGIFTKQLGIDLEVVDIGMKEDI QKEYPNFYRKKIRRGSRNFVQEAAMTEEECEKAILEGFSFIQERREEYDIFSNGEMGIGN TTTSSAVLYALTQKNIHDVVGHGGGLSEEGLFKKKQIIQDACQKYQLFGKSPFDILSSVG GYDIAFLVGCYLGTAFYRKAMIVDGFISAVAALLACRMKAEVQDYCIFSHQSEEPGMKII LEELQETTFLQMKMRLGEGTGAVMVYPILDCALAMFQSLKTPKEVYDMFYEQ >gi|224531373|gb|GG658179.1| GENE 47 43014 - 43697 734 227 aa, chain + ## HITS:1 COG:FN0909 KEGG:ns NR:ns ## COG: FN0909 COG2003 # Protein_GI_number: 19704244 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Fusobacterium nucleatum # 6 227 6 232 232 209 47.0 3e-54 MEILRNEGHRERLRKRYLERGFSSLQEYEVLELLLTYALPRKDTKALSKELLHRFGTLSA VCKAKTEELQSIKGIKENTSILLHFVGDLQKELFRNSLQEEKNIHIQRKEDLISYVRAQI GFENREKFFVLFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPS GNTQPSRQDIALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL >gi|224531373|gb|GG658179.1| GENE 48 43698 - 44615 1369 305 aa, chain + ## HITS:1 COG:FN0908 KEGG:ns NR:ns ## COG: FN0908 COG1774 # Protein_GI_number: 19704243 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Fusobacterium nucleatum # 5 305 12 312 312 367 65.0 1e-101 MMEENIENQEVEIKEEYRVLTVMFEVTKKRYFFEVPEGVEYKKGDYVIVETIRGQEIGLS CGKPMMVAVKSLVLPLKPVIKKASEEERTIYLQQREDAKRAFAIGKEKILHHKLPMKLVE TEYTFDRSKLLFYFTAEGRIDFRDLVKDLANIFKIRIELRQIGVRDEARILGTIGLCGRE LCCRSFINKFDSVSIKMARDQGLVINPTKISGVCGRLLCCINYEYKQYEEALRRFPAVNQ MVASPDGDGKVLSIAPLLGTLYVDVFGKGIFQYRVEEVKFNKKEANKLKNVKSNEEAEHK DLEKE >gi|224531373|gb|GG658179.1| GENE 49 44615 - 45280 659 221 aa, chain + ## HITS:1 COG:FN0907 KEGG:ns NR:ns ## COG: FN0907 COG4123 # Protein_GI_number: 19704242 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Fusobacterium nucleatum # 17 214 19 218 223 142 42.0 6e-34 MEIYDEVFFENGLGFYQEKEGFRFGNDIVLLAEFITEFAKPQQKNLEIGTGNGILPVLLS QKGFLSKEYFAVDILESNIVLAQKNAEKNGIYAQFLCQDIRSFSEKNSYRQIFANPPYMK QDGKLQNDNKKKAIARHEICLSLEEFILSVKKILAPIGALYMVYRSHRLQELLEMCSRHQ LYASKIQFVYHENGKVSNLVLLEIYKGKQTKCEILKAKYIK >gi|224531373|gb|GG658179.1| GENE 50 45328 - 45672 400 114 aa, chain - ## HITS:1 COG:no KEGG:Ilyop_0312 NR:ns ## KEGG: Ilyop_0312 # Name: not_defined # Def: domain of unknown function DUF2023 # Organism: I.polytropus # Pathway: not_defined # 1 108 16 123 125 134 60.0 1e-30 MEIFYHHIYEYQKGVRNLILHSTSKGNLNLVRNKLSAENISFLIYPLGKDKINIFFGDTE CIAVIKKIGKISLTDYTPEEDFILGIMLGYDRRKQCSRYLQMKQENKKLTVHTA >gi|224531373|gb|GG658179.1| GENE 51 45692 - 46189 962 165 aa, chain - ## HITS:1 COG:FN0472 KEGG:ns NR:ns ## COG: FN0472 COG0716 # Protein_GI_number: 19703807 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 165 1 167 167 227 77.0 6e-60 MKTVGIFYGTTGGKTQEVIDIVAAKLGDVKVIDVANGIGELSSFDNIILASPTYGMGDLQ DDWAGCIDELAGMDFSGKVVALIGVGDSAIFGGNYVEAMKHFYDAVSPKGAKIVGAMSTD GYSFEASEAVIDDKFMGLAIDASFDEGEMTEKVEEWLAKIKPEFV >gi|224531373|gb|GG658179.1| GENE 52 46385 - 48367 3009 660 aa, chain + ## HITS:1 COG:FN0224 KEGG:ns NR:ns ## COG: FN0224 COG0556 # Protein_GI_number: 19703569 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Fusobacterium nucleatum # 1 650 5 653 663 924 73.0 0 MFRLCAKYQPTGDQPIAIEKLVKSLERKNRDQVLLGVTGSGKTFTIANVIEKVQRPTLII APNKTLAAQLYQEYKSFFPENAVEYFVSYYDYYQPEAYIKTTDTYIEKDSAVNEEIDKLR NAATAALIMRKDVIIVASVSAIYGLGSPEIYKKMTIPIDLKTGISRSKLIERLIALRYER NDMNFVRGTFRVKGDVVDIYPSYLETGYRLEFWGDDLEAISEIHTLTGEKIKKNLERIVI YAATQYITEEEDLERIITEIREDQVREVKQFQDSGKLLEAQRLQQRVDYDIEMIKEIGYC KGIENYARYLAGKLPGETPNTLLDYFPENFLLVLDESHVGVPQIRGMYNGDISRKTTLVE NGFRLKAALDNRPLQFDEFRARTGQTIYVSATPGDYEIQQSGSSVVEQLIRPTGILDPFI EVRPTKGQVDDLLEEIHKRVVKKQRVLVTTLTKKMAEELTEYYSDLGIKVRYMHSDVDTL DRIEIIKLLRKGEIDVLVGINLLREGLDIPEVSLVAILEADKEGFLRSRRSLIQTIGRAA RNVEGRVILYGDVMTDSMALAMEETKRRRAIQENYNLLHGVEPEAIVKEIAEEMIQLDYG ISEEAFSKKSKKKFHSKEEIEKEIAKCHKKIVKLSKELDFEQAILVRDEMKLLQEMLLSF >gi|224531373|gb|GG658179.1| GENE 53 48376 - 49590 1180 404 aa, chain + ## HITS:1 COG:FN1066 KEGG:ns NR:ns ## COG: FN1066 COG1570 # Protein_GI_number: 19704401 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Fusobacterium nucleatum # 1 403 1 403 404 417 54.0 1e-116 MEYIYKVSDFNLKIKRYLEGNYEFKNMIIEGELSGVTYYKSGHLYFQLKDENSQVKCAAF SYQRRGISDDLQEGEKVRVFADVGFYENRGDFQLLVRGIEKQNTLGKMYADLEKLKKRMA AEGYFSLEHKKTLPSYPKVIGVVTALTGAAVQDIIKTIRKRDPRIDVYIYSAKVQGTGAE QEIIAGIETLNRIPEIDFLIAGRGGGSVEDLWAFNKEDVALAFYHSQKPIISAVGHEVDI LLSDFTADVRAATPTQAVELSVPELEQYYQEIQARYTKLQLLGKQSLLRKKQDLQKRSQN YYLQHFPKSFENYKRELMYREEQLQRNVKWILERKKQEHHLVLQKMIQLNPMNTLQKGYV ILQREKKMLRSVEEINLKDEIEIRMIDGRIKAEVKEKRYENKME >gi|224531373|gb|GG658179.1| GENE 54 49571 - 50245 931 224 aa, chain + ## HITS:1 COG:FN1067 KEGG:ns NR:ns ## COG: FN1067 COG0457 # Protein_GI_number: 19704402 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 82 220 94 232 237 109 38.0 3e-24 MKIRWNKGMKIVCFLALSFSLLATGEIREIEMIGAHENKAIPEKVVTEAVVSKEAKEQVD IGETTEEGVQEEEDKVLTFATVFQKGNYLFVQKQYEKANSVFKSDFSDMKNIFGAATTDR FLGRHAQAIEEYTKVLQINKDFGEAYLGRALSYRDSGKYSEAISDFEKYLSLTQKEDGYL GLGDTYMAMGDYSKAQQVLAQGSSKYPSSVLMKKMMSQAYLKTK >gi|224531373|gb|GG658179.1| GENE 55 50264 - 51115 1084 283 aa, chain + ## HITS:1 COG:FN1068 KEGG:ns NR:ns ## COG: FN1068 COG0758 # Protein_GI_number: 19704403 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Fusobacterium nucleatum # 4 282 10 287 288 282 52.0 7e-76 MYQIHIEDEQYPKLLKEISKPPKTLYCMGDIRLLQADRKIAVVGTRTATDYGKICCQKLV KTLCSADVVTVSGLALGIDAICQQETLHCGGKTIAVVGSGLDEIYPKQNTNLWNRIAKEG LLVSEYPLGTKAFPKNFPERNRIIAGLSKAVVVVESKERGGSLITAELALEENRDVYAIP GDIDSPCSRGCNQLIRDAQAKLLAKMEEILYDYDWNRKEEKEIEVEVSQEAQKILVSLIR EKSLDDLEKELFLSKQVLLSQLMQLEIEGWIKSVSGGKFKKIK >gi|224531373|gb|GG658179.1| GENE 56 51130 - 53379 2810 749 aa, chain + ## HITS:1 COG:FN1069_1 KEGG:ns NR:ns ## COG: FN1069_1 COG0550 # Protein_GI_number: 19704404 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Fusobacterium nucleatum # 6 676 13 683 684 816 66.0 0 MANKNLVIVESPAKAKTIEKILGKNYEVIASFGHICDLPKTKMGVDVDNDFKTSYSTIKG KGEVVKKLKMQAKNANKVYLASDPDREGEAIAWHIANALKLNKEEKNRIEFHEITERAIR EAVKNPKAIDENKVNAQQARRVLDRLVGYEISPFLWKLISPNTSAGRVQSVALKLICDLE DKIQKFIPEKYWDIKGQFDERWLWPLYKIDGKKVDKIKNYEIVKRVQTLQKQKFQVLEAK ISKKSKRPPLALKTSTLQQLASSYLGFSASRTMSLAQKLYEGIDINGSHKGLITYMRTDS TRISQEAKEMAKSYVIETFGKEYVSDVKEKKESKQKIQDAHEAIRPTDVYLTPEILEKVL DKDQAKLYKLIWERFLISELASMKYEQFEIVCAQEEVQFRGSMNKILFDGYYKVFKEEEE LNLEDFPKIEVGDLLELSKLEMKEDMTKPPARLTESSLVKMLETEGIGRPSTYASIIETL KKREYIVMEKRSFIPTEIGYEVKAQLEKYFSKIMNVKFTAELENELDGVEEGTEDWISLL HRFYDGLKEEMDACREAVQAETEKIILSDVLCANGKDYMIAKTGRFGRYLASPVENDDTK ISLKNINISMEQWKQGKIFVKDALEESLKKKAGHRTDVKTESGAYYLLKEGRFGSYLESE NFKEDSLREALPAEIRKDLKAGKIEILDGVYQFAQRIRAIKEEEEALIREAGVCEKCGKP FKVNRGRWGRFLSCTGYPDCKNIRKIEKK >gi|224531373|gb|GG658179.1| GENE 57 53401 - 54708 1838 435 aa, chain + ## HITS:1 COG:FN1070 KEGG:ns NR:ns ## COG: FN1070 COG1206 # Protein_GI_number: 19704405 # Func_class: J Translation, ribosomal structure and biogenesis # Function: NAD(FAD)-utilizing enzyme possibly involved in translation # Organism: Fusobacterium nucleatum # 1 433 1 432 434 624 75.0 1e-178 MKKEVIVVGAGLAGSEATYQLAKRGIPVRLYEMKQQKKTEAHHYDYFAELVCSNSLGGDH LGNASGLMKEELRLLDSLLVRVADETKVPAGQALAVDRHGFSEKITRILRNMENITIVEE EFKEIPKDQYVLIASGPLTSDALFTELLTLTGEESLYFYDAAAPIVSLESIDMNSAYFQS RYGKGEGEYINCPMTREEYEAFYTELIHAERAPLKKFEEEKLFDACMPVEKIAMSGEKSL LFGPLKPKGLINPKTDRMDHAVVQLRQDDKDGKLYNMVGFQTNLKWGEQKRVFSMIPALK QAEFIRYGVMHRNTFINSTKLLEKDLSLKTQNNLYFAGQITGGEGYVAAMATGCMAAINI ANKLQGKEPFILEDVTAIGALIRYITEEKKKFQPMGPNFGIIRSLEGKRIRDKKERYLEM SRIAIEYLKNKIKML >gi|224531373|gb|GG658179.1| GENE 58 54730 - 55518 669 262 aa, chain + ## HITS:1 COG:FN1071 KEGG:ns NR:ns ## COG: FN1071 COG4974 # Protein_GI_number: 19704406 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Fusobacterium nucleatum # 9 259 12 282 290 102 30.0 8e-22 MKEFILWKQKYIHHLELQRGLSQNSLRAIQKDLEQFLNYMEEYQDGELTVLTLKSYFFHL QEKHASNTIQRKISSIKVFLRFLKEENIVQEDFSLYFTKVRKEEDTILFFEKDVWEQFRR IFENNLRDKAIFELLYSTGMKPKEFLSLTYLQIQWEKQEIYFFQKKESRTVFFSHRAKEA LWNYCEEKGMKEGRIWDFSEKTLRNIFKKYREKISGLENMTIYSFRHTFAITLLRAGMPK SELQYLLGLEQGELLQRYETYK >gi|224531373|gb|GG658179.1| GENE 59 55532 - 56620 1139 362 aa, chain + ## HITS:1 COG:FN1072 KEGG:ns NR:ns ## COG: FN1072 COG1161 # Protein_GI_number: 19704407 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Fusobacterium nucleatum # 1 359 1 366 366 448 60.0 1e-126 MGKKCIGCGIPLQNTDSKKDGYTPKDINGKEELYCQRCFRVSHYGEHSSSFLSREDYQKE LQQWVSPKRLALAVFDIIDFEGSFQDDILDILREMDSIVVINKVDLIPGEKHPSEVANWV KGRLASEGISPLDIAIVSCKNNYGMNGVLRKIQHFYPNGVEVLVLGVTNVGKSSVINRLL GKNRVTVSKYPGTTLLSTMNEILGTKLCLIDTPGLIPEGRFSDLMIEEDQLRVIPSTEIS RKTFKLEKDRCIVLGEFVKLRVLNEEEQRPIFSLYASQGVQFHETSLEKASLQKENENCL HLKKKQKFCKEIFTIAAGEELVWKGFAWLSVKRGPLHIEVEYPEGGDIVIRKAFIHPRRV SF >gi|224531373|gb|GG658179.1| GENE 60 56617 - 57009 478 130 aa, chain + ## HITS:1 COG:no KEGG:FN1073 NR:ns ## KEGG: FN1073 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 37 127 59 165 168 75 37.0 5e-13 MRGIIAVLAAIIIGIALMSRPDSLTEMENAEQTALSLKHLRVSLEQYYQEYKIYPENLVQ DEKFMEIYGKTDLDGTRSRGDSKENNEVHITEDFKEVTDDGGWNYNPKTGEIRANLDFDC FHQKIDWHVM >gi|224531373|gb|GG658179.1| GENE 61 57037 - 58443 1906 468 aa, chain + ## HITS:1 COG:MA2677 KEGG:ns NR:ns ## COG: MA2677 COG2509 # Protein_GI_number: 20091498 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Methanosarcina acetivorans str.C2A # 1 466 21 480 485 321 36.0 2e-87 MKKEYDILFLGGGQSGVFGAYEAAKKNPNLKIAIIDRGKMLDKRICPKEKLGYCVNCPTC AIIYGVSGAGAFSDSKFNMDYRVGGDVHTVVGKKIVNDTIDYVVSIYRDFGFQEEPAGLK YNKVMEEIKRKCIENEVQLVDTPTMHLGTDGSRKLYQKMLEFLVEKNVDFIVDAKITDLL VENNEIQGAIVERNKEIEEYYAKNVVVAMGRSGAAKMMKFANKHKISYQVGAIDIGVRAE IPNLVMRDINENFYEAKMIYYSKTYGDKMRTFCSNPGGFIAAEKYGDDVILANGHAFKDR KSENTNLALLCTKHFTEPFKEPFEYATAIARMSAMLTGGKLLVQSYRDLKQGKRSTEESM TRLNIVPTTEDYIPGDISLACPKRILDNIMEFIEVHDKITPGFASGDLLLYFPEIKFRST RLDIDENMQTSVKGLYAAGDSSGYGSGLNIAAVMGILAVRAILEKIGD >gi|224531373|gb|GG658179.1| GENE 62 58445 - 59449 702 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 24 333 8 320 336 275 43 3e-72 MAFWKKLFGKKEEEQEEIEILEEKNKEEERPKGIFASLHEKLFKTREGLFSKMKSLFSSR SIIDEEMYEELEELLIQSDIGLEMTEKIVTDLEKAVKKQEVQNPEEVYPVLKTVMEEYLI ESEEEFPKEENELQVILIVGVNGVGKTTTIGKIAAKLKKEGKKVVLGAGDTFRAAAVEQL EEWAKRSEAEIVKGKEGADPGSVVFDTLTKAEELGADVAIIDTAGRLHNKAYLMKELEKI NNVVRKKIGERHYESLLVIDGTTGQNALNQAREFNEVTHLTGFIITKLDGTAKGGIVFSL SELLKKPIRFIGVGEKIEDLRKFSKKDFIAALFE >gi|224531373|gb|GG658179.1| GENE 63 59544 - 60557 1504 337 aa, chain + ## HITS:1 COG:FN1172 KEGG:ns NR:ns ## COG: FN1172 COG0280 # Protein_GI_number: 19704507 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Fusobacterium nucleatum # 1 334 4 337 337 534 81.0 1e-151 MSFLGQVRKKALQANRRIVLPESFDERVLRAVAEILKEKVAQPILVGNPDQIMNDAKAYE ISLQGARIVDPENFERFEVYVDKLVELRSKKGMTREEATKILKNDINFFGAMMVKMGDAD GMVSGASSPTAKVLRAGIQVIGTKPGMKTVSSVFIMELSQFKEMYGSVLVFGDCSVIPHP NSEQLADIACSSAETALSIANINPRVALLTFSTKGSANHECVDKVIEAGRILRDRHVSFR FDDELQADAALVKSIGEIKAPLSDVSGNANVLIFPNLSAGNIGYKLVQRLAGANAYGPII QGLDAPVNDLSRGCSVNDIVVLTAITSAQACTDCTFE >gi|224531373|gb|GG658179.1| GENE 64 60582 - 61784 1612 400 aa, chain + ## HITS:1 COG:FN1171 KEGG:ns NR:ns ## COG: FN1171 COG0282 # Protein_GI_number: 19704506 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Fusobacterium nucleatum # 1 396 1 396 398 655 79.0 0 MKVLVINCGSSSLKYQLINPDSKEVFAKGLCERIGIEGSKFEYEVPAKDFEIKLQSPMPT HQEALKLVVDNLVDKKHGVIASVEEVDAIGHRVVHGGETFASSVLITEEVMKAIEDNNDL APLHNPANLMGIHTCMKLMPGKPNVAVFDTAFHQTMPAKSFMYPLPYEDYTELKVRKYGF HGTSHLYVSQTMREIMGNPEHSKIIVCHLGNGSSMSAVLDGKSVDTSMGLTPLQGLMMGT RCGDIDPAAVMFIKDKRGLSDKEIDNRLNKQSGFLGIFGKSSDCRDVEDGVAAGDERAIL ADDMFCYRIKSYIGAYAAAMGGVDAICFAGGIGENAAGIREKVLEGLEFLGVKLDKEVNS VRKKGNVKLSTEDSKVLVYKIPTNEELVIARDTFAIVSGK >gi|224531373|gb|GG658179.1| GENE 65 61907 - 65248 4205 1113 aa, chain + ## HITS:1 COG:FN1170_1 KEGG:ns NR:ns ## COG: FN1170_1 COG0674 # Protein_GI_number: 19704505 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Fusobacterium nucleatum # 1 406 1 406 410 733 86.0 0 MAKKMQTMDGNQAAAYASYAFTEVAGIYPITPSSPMAEYTDEWASKGMKNIFGVPVKLVE MQSEAGAAGSVHGSLQAGALTTTYTASQGLLLKIPNMYKIAGELLPGVIHVSARALSAQA LSIFGDHQDIYAARQTGFAMLATNSVQEVMDLAGVAHLTAIKTRVPFMHFFDGFRTSHEI QKVEVMDYEVFKSLVDYDAIQAFRDRALNPEHPVTRGTAQNDDIYFQAREAQNKFYDAVP DVTAHYMAEISKVTGRDYKPFNYYGAADAERIIVAMGSVCEAAEEVIDYLNAKGEKVGML KVHLYRPFSEKYFFDVFPKSVKKIAVLDRTKEPGSLGEPLLLDVKSLFYGKENAPVIVGG RYGLSSKDTTPAQVIAVFDNLKAEQPKDLFTVGIVDDVTFTSLEVGAPVVVSDPSTKACL FYGLGADGTVGANKNSIKIIGDKTDLYAQGYFAYDSKKSGGVTRSHLRFGKNPIKSTYLV STPNFVACSVPAYLNQYDMTSGLREGGKFLLNCVWDKEEALQRIPNNVKRDIARANGKLY IINATKLAHDIGLGQRTNTIMQSAFFKLAEIIPFEDAQQYMKDYAKKSYAKKGDDIVQLN YQAIDIGASGLVEIEVDPAWKDLKVEAKVEEKDCGCSSCSCTPVEKFVEKIAKPVNAIKG YDLPVSAFDGYEDGTFENGTSAFEKRGVAVDVPLWDSTKCIQCNQCSYVCPHAVIRPFLI SEEEKSASPVEFATLKAMGKGLDGLTYRIQVSPLDCVGCGSCVNVCPAPGKAITMQPIAT SIDAEEDKKADYLFNKVEYRSNLMSIDTVKGSQFAQPLFEFHGACPGCGETPYLKAITQL FGDRMMIANATGCSSIYSGSAPATPYTTNSCGEGPSWASSLFEDNAEFGMGMHVAVEALR DRIQTVMEANLDVVPEEMATLFKEWIANRKYSAKTREIRDILVPMLEKTDAAYAKEILEL KQYLIKKSQWIIGGDGWAYDIGYGGLDHVMASSEDVNIIVLDTEVYSNTGGQASKSTPTA AVAKFAAAGKSVKKKDLAAIAMSYGHIYVAQVSMGANQQQYLKAIKEAEAHQGPSIIIAY APCINHGIKKGMSKSQTEMKISNRMWILAIIPI >gi|224531373|gb|GG658179.1| GENE 66 65280 - 65486 189 68 aa, chain + ## HITS:1 COG:FN1421_3 KEGG:ns NR:ns ## COG: FN1421_3 COG1013 # Protein_GI_number: 19704753 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit # Organism: Fusobacterium nucleatum # 3 65 315 377 377 99 66.0 2e-21 MVIDSKEPKWEQYDEYLLGETRYLTLSKSNPEHAKELFAENKFEAQRRWRQYKRLAAMDF SEENRSAE >gi|224531373|gb|GG658179.1| GENE 67 65634 - 65708 96 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKQENIKNHNHHFANFFYYYYYMN >gi|224531373|gb|GG658179.1| GENE 68 66209 - 67597 2093 462 aa, chain + ## HITS:1 COG:FN0352 KEGG:ns NR:ns ## COG: FN0352 COG1757 # Protein_GI_number: 19703695 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 1 458 1 458 459 556 75.0 1e-158 MFDLVQHRKPSLVESLFIILIIFILLGFPMIAIPNMTPHIPVLVSIIFLILYGMFQKVSF KKMQESMIQSVSTSMGAIYLFFFIGILISVLMMSGAIPTLMYFGLDVISTKVFYLSTFCI TAIIGISIGSSLTTVATLGVALMGLSNAFGLNPAITAGAIVSGAFFGDKMSPLSDTTGIA ASIVGVDLFDHIKNMLYTTLPAFVISAIVFGAFSPWNQAGDISSVAAFKEDILSTGLVHS YALLPFLLLLIFSIFKVPAIITIIFSSILSLVIAEIHTSYSLQEIGTFLFSGFSKTGVSE SIASLVSRGGINSMFFTITIIILALSLGGLLFGLGIIPTLLESIAHFLNSASRATICVVI TALGVNFIVGEQYLSILLAGKTFKPVYDKLHLHSKNLSRTLEDAGTVINPLVPWGVCGVF ITSMLGVPTLVYLPFAVFCYSSLILTVVFGFTGLTLTKGGNE >gi|224531373|gb|GG658179.1| GENE 69 67594 - 68256 819 220 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452329|ref|ZP_05617628.1| ## NR: gi|257452329|ref|ZP_05617628.1| hypothetical protein F3_04625 [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] # 1 220 1 220 220 393 98.0 1e-108 MRKKIIVCFFLCCSILSFSARPKSYQVSQKELIHWSYEAAENVFPDSIEGWKHVLVGTLA VETNLGQFKGNSIYGVSQMRNSGFQFVQRELQRNSKERKVFEELAGRSPNTVTLKMLETD HRLSIIYMAFYYKFCAHGKAHPTDKEAAAKIWKQYYNTKFGTGTPQRFLSAYAKQKKYIE QYQKNLEDIPEEIKNTVQEIELLESLEIEENMENNEERKE >gi|224531373|gb|GG658179.1| GENE 70 68447 - 68692 577 81 aa, chain - ## HITS:1 COG:no KEGG:FN1796 NR:ns ## KEGG: FN1796 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 77 1 77 79 67 57.0 2e-10 MERLTLEEVQKYIKEIKEKGLYEKYQAMILDDFEEHHIVYLLEEEEIIALAYKNQVTPYS MKDYYNWYEMNLLIEEDEYGL >gi|224531373|gb|GG658179.1| GENE 71 68847 - 69650 1077 267 aa, chain + ## HITS:1 COG:MTH1334 KEGG:ns NR:ns ## COG: MTH1334 COG0253 # Protein_GI_number: 15679334 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Methanothermobacter thermautotrophicus # 3 263 7 283 289 173 35.0 3e-43 MKFWKMEAAGNDFVIFDGRNIKIEDIQDLAKKLCDRHFGVGADGILFCEESSQADIKMNY YNSDGSRGEMCGNGIRCLSRFIYENKIVDKLKMSIETDNGVKEVVLTVVENEHISQVKVE MGKAIWEKEFQKEILEIEGRSFDFYRVTVGVPHIAILVDEFMKDEELNYWGSLLEKHSSF PRKTNVNFIKVLNEKEVQIKTWERGAGRTLGCATGCSSCGVILQRLQKIKGEVHFYTEGG DVFVQTQDDFVTIYGKANLIFTGDMDV >gi|224531373|gb|GG658179.1| GENE 72 69643 - 71223 1876 526 aa, chain + ## HITS:1 COG:FN1727 KEGG:ns NR:ns ## COG: FN1727 COG0038 # Protein_GI_number: 19705048 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Fusobacterium nucleatum # 7 522 3 516 521 599 62.0 1e-171 MSRKILNVEESLKHIQNSNGKLYFLCLMVGLITGVIVSFYRYALHIFNVLRETFVSPATL HNYPFLIKIWCLFLVVGFFIDFLYQKYPRTSGSGIPQVKGIILGTVHYKHWFAQLLAKFI GGLFGIGAGLSLGREGPSVQLGSYVATGIAKSFHCNRVDENYLITSGASAGLAGAFGAPL AGVMFSLEELHKFLTAKLIICIFVASIASDFIGRRFFGMDTSFSMLAHYPKDINPYLQFA LYILFGVIIAFFGKLFTVTLVKTQNLFQGIKISRWMKVVFVMSTSFLLCLVLPEVTGGGH ELVESLPHLQQGILFLFFVFVIKLLFTSISYATGFAGGIFLPMLVLGAILGKIFALTLLS VFPFTPEMIVHFMVLGMVGYFVSVVRAPITGAVLILEMTGSFDHLLALVTVSVVAFYVTA LLKLAPVYDILYERMPKDDIEETHDVESMGKTLIVVPVAAESYLDGKKISEVEWGEEVLV VALRRSELEKIPKGDTVMQSGDNIVLLLPESIVAEVKEKLLQKGIE >gi|224531373|gb|GG658179.1| GENE 73 71238 - 72617 1458 459 aa, chain + ## HITS:1 COG:FN1726 KEGG:ns NR:ns ## COG: FN1726 COG0534 # Protein_GI_number: 19705047 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 449 1 449 457 498 59.0 1e-140 MSLSHSFLEQESIGRLLWKFSLPAVVGMVVNALYNVVDRIYIGHIERVGHLAITGVGVIF PIVLFSFAFALLVGLGSSANISLHLGKKEKDRAEQFLGNSFVLGSIFSLSFTILLFFIMK ECIYLVGGSDVSYPYAKQYLEIVAIGFLPMTLSYILNAAIRSDGNPKMAMFTLLIGTFVN IILDPIFIFILDMGVRGAALATIISQTVSFLWTIYYFTSSKSVMKLKKKYIRFHFELSKK VIALGSSSFGVQVGVSIINYIMNVILREYGGDLSIGAMAIIQSVMSLLLMPIFGINQGVQ PILGYNYGAKKYDRVKEALFKGIGAATFICVLGFLSIELFSQYWIILFTKETSLLELAEY GLRRQVIVFPIVGFQIVSSIYFQAVGKPKLSFFISMSRQILVLIPCLFLLSSIWGLDGVW YASPLSDFIATIVTFILIKRELKHLEYLKLEKEREEIVE >gi|224531373|gb|GG658179.1| GENE 74 72614 - 73840 1786 408 aa, chain + ## HITS:1 COG:CAC0476 KEGG:ns NR:ns ## COG: CAC0476 COG2195 # Protein_GI_number: 15893767 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Clostridium acetobutylicum # 3 403 2 403 408 481 58.0 1e-135 MREELVNRFLKYVKIYTTSDEASETCPSTERQWDLAKILVEDLKEIGLEDICLDKNGYVM ATLPANIEGAPSIGWIAHMDTAPNYNGNHVNPRIIENYDGKDIILDEEKEIISSVVDFPE LKNYIGKTLIVTDGSSLLGADDKAGVTEILEAVKYLKAHPEIPHGKVRVGFTPDEEIGRG ADLFDIKAFDCDFAYTVDGGEIGELEYENFNAASVHVEITGRDIHPGAAKDKMINSMLLA MEVQSMLPVEQRPEYTTGYEGFFLLDSLQGSVEKTTMDYIIRDHSFEKFTKKKEFIQEVI DFLGKKYPKAKLECHVKDSYFNMREKIEPVMYIIDLAKKSMEELGIIPKVSPIRGGTDGS RLSYEGLPCPNIFTGGHNFHGKHEYICVESMEKARDLIVRITENATKL >gi|224531373|gb|GG658179.1| GENE 75 73877 - 75190 1384 437 aa, chain + ## HITS:1 COG:FN1725 KEGG:ns NR:ns ## COG: FN1725 COG0168 # Protein_GI_number: 19705046 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Fusobacterium nucleatum # 1 437 13 448 448 437 58.0 1e-122 MSPSRKLILGFLLVIIVGVFLLMLPFSLKEGKSLSPLEALFTVVSAVCVTGLSVVDVAEV FSPVGDAILIAFIQIGGLGVMTFSSIVFLLAGQKMTLYTRILLKEERNANSVGEILNFVR LMLLTVFIIESIGAVILMHEFRKIMPYEQAVYYGIFHSISAFCNAGFSLFSNNLENFRGN PVISLTISYLIILGGMGFAIINSFIMMIRKGVSRFTLTSKLAIQISMILTFGGAILFFLL EFSNSATLFPLPWSEKIIASIFQSVTLRTAGFNTIPLANLRSATVFMACIWMLIGASPGS TGGGIKTTTLGVILFYVIGIIRGKEHVEIFNRRLDWDVMNKALALLVVSLSYIALVILLL LVIEPFSMEKIVFEVVSAFGTVGLTMGITPYLTVTSKLLIIVTMFIGRLGPMTIALALGE KKKKARVQYPKEDILIG >gi|224531373|gb|GG658179.1| GENE 76 75203 - 75862 921 219 aa, chain + ## HITS:1 COG:FN1724 KEGG:ns NR:ns ## COG: FN1724 COG0569 # Protein_GI_number: 19705045 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Fusobacterium nucleatum # 1 217 1 217 218 258 58.0 4e-69 MKQYLVIGLGRFGRSVAKTLYESNQEVMAVDVSEDLVQDMINDYKVENAMVLDGTDLTSL QEIGAQNFDTAFVCMRNLESSILTTLNLRELGISKIIAKAGSREHGKVLEKIGASKIVYP EEYMGRRIAQLVMEPNMIEHLRFSSDFLLAEIKAPNLFWNKTLIQLNVRNKYNANIVGIR KANDVFYPNPAAETLIEKGDILVVITDSKTARTLESLGE >gi|224531373|gb|GG658179.1| GENE 77 75878 - 77770 2441 630 aa, chain + ## HITS:1 COG:FN1723 KEGG:ns NR:ns ## COG: FN1723 COG0445 # Protein_GI_number: 19705044 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Fusobacterium nucleatum # 2 630 1 633 633 943 75.0 0 MVQEFDVIVVGAGHAGAEAALAAARLGKKTAIFTISLDNIGVMSCNPSLGGPAKSHLVRE IDALGGEMGRNIDKTYIQIRVLNTKKGPAVRSLRAQADKIRYAKEMKRTIETCENLSAIQ GMVSELLVEDGKAVGIKIREGVEYRAKRIILATGTFLRGLIHIGESHFSGGRMGELSSED LPLSLLKHGLDLQRFKTGTPSRIDARTIDFSVLEEQPGETAKILKFSNRTSDKELKDRRQ ISCYIAHTNEEVHTEIKNNRERSPLFNGTIQGLGPRYCPSIEDKVYRYADKPQHHLFLER EGYDTNEIYLGGLSSSLPVDVQENMIHKIHGFEQARIMRYGYAIEYDYIPPSEIQYSLES RTIPNLFLAGQINGTSGYEEAGAQGLMAGINAVRSIDGKDPIILDRADSYIGTLIDDLVL KGTNEPYRMFTARSEYRLVLREDNADLRLSKIGYEVGLVSEEEYQKVEAKRENVRKIIEA LQQNFVGPGNPRVNERLSEKGEQILKDGASLFEVLRRPEITYEDVEYMTEGTKTFDFTSY DEDTKYQVEVQTKYSGYIERSFKMIEKHKSMEEKRIPQDIDYDSLQNIPKEAKEKLKKIR PNNIGQASRISGVSPADIQVLLIYLKMRGN >gi|224531373|gb|GG658179.1| GENE 78 77772 - 78476 1044 234 aa, chain + ## HITS:1 COG:FN1722 KEGG:ns NR:ns ## COG: FN1722 COG0357 # Protein_GI_number: 19705043 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Fusobacterium nucleatum # 1 234 1 232 232 243 60.0 2e-64 MKEYLQEGIQKLGISLSEKQIENLLTYVTLLLEYNQHTNLTAIREEKAVIEKHILDSLLL QEYIPKDATTAIDIGTGAGFPGMVLAICNPMIHFTLMDSVGKKTKFLEWVKEDLNLQNVE VINARAEDYIQISKRREYYDLGFCRGVSKLAVILEYMIPFLKVGALFLPQKMVGTEEEKE AVNALQILKAQIEKKYTKYLPYSQEERLILQIRKEEKTDKMYPRKVGLITKKPL >gi|224531373|gb|GG658179.1| GENE 79 78495 - 82517 4042 1340 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_0607 NR:ns ## KEGG: Ilyop_0607 # Name: not_defined # Def: protein of unknown function DUF490 # Organism: I.polytropus # Pathway: not_defined # 335 1340 439 1480 1482 384 26.0 1e-104 MKGIFKYKTTVINISVFLTLLVGAIFYAANHLEEAIASVSKLFLGDPILIEKIEIKKDKI RLEGISMDLEGEPFLRIPKIEAERPSFLKLGNITIPEGDIYILRKEDGKLNIDRYLPKEE SKKINLKDYRPITNIPIEKISFETLRTHYEDRVLDPKFQKTISWQGETVFDRKKGISAKL LGSDKEERYQIDYSGEKMPYDVQLDIIGIRPEDYWKPYLKTESIVLETGNLEAHIHSDYY GNTGEIQADIPKLEFLNKKWEAGNLYISLDKNQVNASLDYKENGENKNSIITYDLEKKEA HAEFLDIYYDKISLDLAMQKKWKLDFLAEHSVYPKLEGTLSFDFKEDKIPFSLQSNIVDT DGEYLKNVSYLKLYKKKRFFLNYDIAKANLEKGEGEIPISIYDYKANIIFQAKDNVIEIQ KAKIDSEKNGSILLKGFTDINEKKAEFEYKSDHFCFEKEIEGTEVFAQLALQGNISYDAH LGVKVSSQGEIEKVQYGDYGIEGLRVDMEYEEDEIQVYAFENRFLNAKGSIDIVNQNTNL EIELKDFDNTKVNVSYPEFFVNHARGQVRGNIKNPIADLYIEEGKLSILSQKENQVRGNF HLEDKVVSFQDVNLDQNLFSGEYRIFDNSYHIFANIIEEKLSDYYGFHDLYYRVIGEVEV NGKGRELFATAKSTIDKIYYRGKKLPNIAWEGSYTLGKQGIGKIDLSPIYLQNDKKKRFL SLEAEIDLDQETLSVDIPKQSFYLEDIEDYTTVDFLEGKWTLAGKVKGNYKNPNYDFQME GENLKVKKAPLDYLTLKFHGNTEKLTIDSIKTAYLQNKAEIQGYYGIQDESYDISVKAPK IDWKLLQSFASEYGVENIEGNSNLDFHIRSQQSQGNLFLHNFSFEMPKKYISVKNFTGNI ELHGNEMMVHQISGIVNEGKAVVKGRMQLPKLNEVKKDFSFLKKLDYYFNIDVQELKYRI PEMLSLDISSHLRLESNKLRGNIELLKGKVVDIPNTYQSYWKIIRKFFEEKSSQVVLNSQ SLGQDFEVQESETKLENLLDIDLSLWIQEGIKVDIPELNVAVEDVKGTVVGGLSVVGKEG KYALLGNLEVEKGSLMVNTNIFSLDKAMLSFNENKTYLPNVNPSLLIDSNVDVNGEKVRF SIQGKTDDLRFSIGSSQGNTSGSLNSLITGQIQENESNASYTALLRNIIGGQLTQTVIRP FAKIIRKVFHFEKFRITSNVYNQAKKGDDSSGDLYLGAKIEVEDNLYKDKLYWNFTGTLY DTGLQNTQINSQSKDNKIMDQYDLSLRYPYSETKTFEIGVGKLPSKFYTNQEQIKEKKKL NYHIGVKIEKKMNDFFDIFR >gi|224531373|gb|GG658179.1| GENE 80 82588 - 84711 2809 707 aa, chain + ## HITS:1 COG:FN1911 KEGG:ns NR:ns ## COG: FN1911 COG4775 # Protein_GI_number: 19705216 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Fusobacterium nucleatum # 23 707 3 678 678 820 59.0 0 MKRTLVAMLLFLVSMVSFAAGGSLLVKKLEVLNNQEVPASIILNQMDLKEGKPFSTEVML HDFQTLKASKYLEDVMIQPQAYEGGVNVVVNVVEKKDAQMLLREDGIISVSEQANVDKSL ILSNIMISGNQLVSTSDMKAVLPLKQGGYFSKTAIEDGQKALLATGYFKEVVPSTQKNGN GVEVTYTVVENPVIQGINIHGNTLFSTQDILKALKTKTGEVLNINYLRADRDAIMNLYQD QGYTLSEITDMGLNEKGELEVVVSEGIVRNVSFQKMVTKQKGHRRKPTDDILKTQDYVIQ REIELQSGKIYNSQDYDNTVQNLMRLGIFKNIKSEIRRVPGDPNGRDIVLLIDEDRTAIL QGAISYGSETGVMGTLSLKDNNWKGRAQEFGVNFEKSNKDYTGFTIDFFDPWIRDTDRIS WGWSLYKTSYGDSDSALFNNIDTIGAKINVGKGFARNWRFSLGMKGEYVKEEANKGNFTQ LSNGSWQYNGKNKNNPNERIFDKDAVNDKYWVWSIFPYLTYDTRNNPWNATSGEYAKLQL ETGYAGGYKSGSFSNATLELRKYHRGFWKKNIFAYKVVGGIMTQSTKEGQRFWVGGGNTL RGYDGGTFRGTQKVTATIENRTQINDILGIVFFADAGRAWNQKGRDPEYGNDETFSKGIA TTAGVGLRLNTPMGPLRFDFGWPVGKLQDKYSQDRGMKFYFNMGQSF >gi|224531373|gb|GG658179.1| GENE 81 84756 - 85235 845 159 aa, chain + ## HITS:1 COG:no KEGG:FN1910 NR:ns ## KEGG: FN1910 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 17 159 15 157 157 104 52.0 1e-21 MKKMLMMLGLVSVLSVSAFAEKIAVVDSQEVIGKYSGTKTVGASLDKEAKRYENEINQRQ VALQKEEVALQAKGNKITDAEKKAFQAKVEGFYKYVNTSKETMGKMEYDKMSVIFKKANK AVQAVAAEGKYDYVLERGAVLLGGEDITDKVIKKMEATK >gi|224531373|gb|GG658179.1| GENE 82 85256 - 86257 1474 333 aa, chain + ## HITS:1 COG:FN1909 KEGG:ns NR:ns ## COG: FN1909 COG1044 # Protein_GI_number: 19705214 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Fusobacterium nucleatum # 1 331 1 331 332 475 74.0 1e-134 MSYQINDLVTLLNGTIKGESVERVSGLAPFFHAEEGEVTFAAEEKFLTKLQECKAKVIIV PDVDLPMNLGKTYIVVRDNPRILMPKLLHFFKRPLKKMEKMIEDSAKIGENVSIAPNVYI GHDAVIGDHVVLYPNVFIGEGVEIGAGSILYSNVSIREFVKIGKECIFQPGAVIGSDGFG FVKVQGNNMKIDQIGSVIIEDFVEIGANTTVDRGAIGNTVIKKYTKIDNLVQIAHNDRIG ENCLIVSQVGIAGSTEIGNNVTLAGQTGVAGHIKIGDNIIIGSKSGVSGDVKSNQILSGY PLVDHKEDLKIKVSMKKLPELLKRVKELEKKGK >gi|224531373|gb|GG658179.1| GENE 83 86330 - 86944 757 204 aa, chain + ## HITS:1 COG:sll1084_2 KEGG:ns NR:ns ## COG: sll1084_2 COG5011 # Protein_GI_number: 16329879 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Synechocystis # 4 154 3 162 222 97 36.0 1e-20 MKKRVYFDKYDNMRFISHLDLIRFLERLFQKTNLPIKYSNGFHPRPKMSFGNPISLGTEA FGEIMDIELEEDLSNAEVLRRLNSAQVLGFQVQKVESLEGKGNIVEEYPYTRYSVEGSCS VIDRLEELLQQEEIVEVREKKGKIVTRELKERIVSWERKENGITLTSINISPNAYLELAK ITQQEVRIKRLGYEKAEDKGEELC >gi|224531373|gb|GG658179.1| GENE 84 86938 - 88212 1494 424 aa, chain + ## HITS:1 COG:FN0110 KEGG:ns NR:ns ## COG: FN0110 COG0172 # Protein_GI_number: 19703458 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 424 4 424 424 674 79.0 0 MLEARFIRENREKVQEMLKNRNNSLDLSEFDRLDAERREILSEVEALKRERNTESAKIAQ FKKEGKDASEVIKAMGMTSAKIKELDTKLAEVEEKVNYILMIIPNMYHETTPIGKDEEEN VEIRKWGTPREFAFTPKSHWEIGEELGILDFERGAKLSGSRFVLYRGAAARLERALISFM LDTHTTEHGYTEHLTPFMVKSEVCEGTGQLPKFEEDMYKTTEDNMYLISTSEITMTNIHR KEILDQAELPKYYTAYSPCFRREAGSYGKDVKGLIRVHQFNKVEMVKITDNKTSYDELEK MVNNAETILQKLELPYRVIALCSGDIGFSAAKTYDLEVWLPSQNKYREISSCSNCEDFQA RRMGLKYRPQGENKSEFCHTLNGSGLAVGRTLVAIMENYQQEDGSFLIPKVLVPYMGGME VVKK >gi|224531373|gb|GG658179.1| GENE 85 88199 - 88726 118 175 aa, chain + ## HITS:1 COG:no KEGG:FN0109 NR:ns ## KEGG: FN0109 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 159 2 155 158 117 49.0 2e-25 MLKNKIYLLLFIIIFAINLFFQDWRTLSLSFLFLLCWNIAYNSQFKQQLKRIWILFFFYL STFVIQLYYHQEGKVLVQLFGFYITLEGVQQFLGNFLRILNLILLSWIVANQKIFHGRFA RYQEIIETVIEFVPQVFILFRKKMKIKWFFRYILKKYRKNNNNLRRKKWDTHIVS >gi|224531373|gb|GG658179.1| GENE 86 88702 - 89691 1628 329 aa, chain + ## HITS:1 COG:TP0662 KEGG:ns NR:ns ## COG: TP0662 COG0191 # Protein_GI_number: 15639649 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Treponema pallidum # 4 322 3 330 332 344 53.0 1e-94 MGYTYRELGLSNTREMFAKANREGYAVPAFNFNNMEMALAIVEACAEMGSPVILQCSAGA IKYMGYDVAPLMAKAAVDRARNMGSDIPVALHLDHGADLETVKKCIAAGFSSVMIDASHY DYEENIKVTKEVVEYAHKNAGEYVSVEAELGVLAGIEDDVHAEEHKYTNPEEVIDFVGRT GVDSLAIAIGTSHGAHKFKPGEDPKLRLDVLDAVAEKLGSFPIVLHGSSAVPKKYVDMIK EFGGEMKDAIGIPDSELRGATKSTVAKINVDTDGRLAFTAGVRQVLGTNPKEFDPRKYLG AGQKEMKEYYKTKVQDVFGSEGAYVKGTK >gi|224531373|gb|GG658179.1| GENE 87 89708 - 89785 75 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEQESLKKKILQAFLYVKTQYIVKK >gi|224531373|gb|GG658179.1| GENE 88 89871 - 92075 2844 734 aa, chain + ## HITS:1 COG:FN0311 KEGG:ns NR:ns ## COG: FN0311 COG1328 # Protein_GI_number: 19703656 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Fusobacterium nucleatum # 2 733 1 728 728 1175 77.0 0 MVKKVIKRDGTVIDFDAKRIVHAISMAFKQNSRTIPEELISKIAHQIENLENKIMSVEEI QDLVVKKLMASSEKDIAMAYQSYRTLKTEIRNKEKSIYKQIGELVDASNESLLVENANKD AKTISVQRDLLAGISSRDYYLNKIVPRHIKEAHIKGEIHLHDLDYLLFRETNCELVDIER MLKGGCNIGNAKMLEPNSVDVAVGHIIQIIASVSSNTYGGCSIPYLDRALVPYIQKSFYK HFKRGLHYTEDFEEEKVENILNSYQREEIIYDNQELKETYPKAYRYASDLTEESVKQAMQ GLEYEINSLSTVNGQTPFTTIGIGTETSWEGRLVQKYVFKTRMGGFGKNKETAIFPKIAY AMTEKLNLNPDSPNWDIAQLAFECMTKSIYPDILFVTQEQWEQGTVVYPMGCRAFLSPWK NKEGKEIYAGRFNFGATSMNLPRMAIKHQGDEKGFYQELDRILEICKENSIFRAKYLEKT TADIAPILWMYGALAEKEEKETIADLIWGGYATVSIGYIGLSEVSQLLYGKDFSQDEKVY KKSFAILKYIADKLEQFKAETGLGFAMYGTPSESLCDRFARMDQKEFGNIPGITDKGYYD NSFHVSSKLKMDQFEKLRLEALGHQYSKGGHISYIETDSLQKNIEAIPAILRYAKSVGIH YMGINQPVDKCYVCGYKGEFSATENGFACPQCGNHDNKKMSVIRRVCGYLAQPNSRPFNK GKQKEIMSRVKHNS >gi|224531373|gb|GG658179.1| GENE 89 92091 - 92606 679 171 aa, chain + ## HITS:1 COG:FN0312 KEGG:ns NR:ns ## COG: FN0312 COG0602 # Protein_GI_number: 19703657 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Fusobacterium nucleatum # 1 167 1 167 168 231 63.0 4e-61 MNYSGIKYSDMINGPGIRVSLFVSGCSHACPGCFNKETWNPNYGEKFTEKQKKEIFDYFK KYPMLLRGLSLLGGDPTYKTNIEPLKTFILEFRKNFPEKDIWMWSGYTWEEILSSPSLLS LVKNCDVLVEGKFIETEKDLSLQWRGSRNQRVIDIVKSLKEKAIVLFEEIA >gi|224531373|gb|GG658179.1| GENE 90 93001 - 93099 102 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFNALTGSNQYVGNWPGVTVEKRQGLIRKIKK >gi|224531373|gb|GG658179.1| GENE 91 93204 - 95096 2319 630 aa, chain + ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 1 615 85 700 709 505 42.0 1e-142 MVDASNIERNLYLSTQLSEIGIPMVIALNMMDVVERNQDKIDTEKLSQLLACPIIEISAL RNKNIDTLVETAMKTAGKKQVHIQSFEEEVEELIKKIEDGVSALKDSSYKRWYAIKLFEK DEKAVANLALSSEKEEKVREIREAAEEKYDDDGEGIITDARYHFITSIIGKTVKKGRTGL TNSDKVDRILTNRILALPIFVVLMFGIYYIAVTIVGGPITDWVNDTFFGEMIGENVAGML ESAEVAPWLSSLIVDGIIGGVGGVLGFLPIIAALYVMMAILEDIGYMARIAFILDRIFRK FGLSGKSFIPILIGTGCSVPGIMATRTIENDNDRRMTIMVASFMPCGAKTEIIALFAASL FAGDKGWWFAPFCYFAGIIAVIISGIMLKKTQQFSGDPAPFVMELPEYHLPTPWNVARTV WDRVKAFVIKAGTIILLTTVVIWFLQNISTSFEFVEFSEDSHSILEAVGKVIAPIFAPLG FGHWAATVATITGLVAKEVVVSTFGVVAGLGDVGADDPTMVEYASSIFTSVSALSFMLFN QLSIPCFAALGAIRSEMNSKKWTWFAIAYQLLFSYVIALMVYQFGKVFILGEAFGVGTVV AVIIFALMVYLLCRKSTTKKGEVKRAVEVK >gi|224531373|gb|GG658179.1| GENE 92 95125 - 95286 299 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNMSTLIVLLVLVVIIIVAIRRVKTKGGCSCGKEHDCGCGCGCGHSHEEEKNN >gi|224531373|gb|GG658179.1| GENE 93 96519 - 96866 313 115 aa, chain + ## HITS:1 COG:no KEGG:FN1859 NR:ns ## KEGG: FN1859 # Name: not_defined # Def: major outer membrane protein # Organism: F.nucleatum # Pathway: not_defined # 2 115 259 368 368 136 62.0 3e-31 MKDKEFYMEMEAYLYNSTELYKNGKFDVSFEFEGGYDPYSFHQYKLVENRNDNKERRDYS LYALPYLQANYQATEFVKLYAAAGAEYRNWKDSAESTASHWRWQPTAWAGMKVNF >gi|224531373|gb|GG658179.1| GENE 94 96982 - 98622 1506 546 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0945 NR:ns ## KEGG: Lebu_0945 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 2 544 3 549 552 507 50.0 1e-142 MKKSLPIGITNFQELIQGNYYFIDKTKLIEDILQDGSKVTLFTRPRRFGKTLNMSMLQYF WDIHNAEANRKLFQGLHIESSPYFTEQGKYPVIFLSLKDIKERTWEECKKEIKKWLSDLY DKYHFLRDSFNQRDLKYFEDIWLEKEEGSYSNALKDLSKYLCQYYQKKVVILIDEYDTPI VSAYENGYYEEAIAFFRNLYSAALKDNEYLQVGVMTGILRVAKEGIFSGLNNLAVYGILD EKYSSSFGLTEEEVEQALHYYEMEYNLPKVKEWYDGYRFGKTEIYNPWSIISYIMNKKIE PYWIGTSSNALINQMLEKARKEESDIFQKLENLFQGNSILQKIQKGSDFHDLVHVEEVWQ LFLYSGYLTVAREEEQGFYQLKIPNKEVYSFFQESFIQKFLGNVTNFSALVVALTEKNWN RFEELLQTVLLNSLSYFDMSMEEEKIYHVFMIGLLSILQEHYYIHSNRESGYGRYDISIE PKEKNRAGFLLECKIAKSEEELEKKAKEALLQIQKKRYDTEMKERGIQEIVKLGIAFYGK KVKIKV >gi|224531373|gb|GG658179.1| GENE 95 98756 - 99310 506 184 aa, chain - ## HITS:1 COG:no KEGG:FN1859 NR:ns ## KEGG: FN1859 # Name: not_defined # Def: major outer membrane protein # Organism: F.nucleatum # Pathway: not_defined # 2 184 196 368 368 142 44.0 8e-33 MYAHKWADHRGSGRKGSEVLGLYLESNYELPYGFSVEFNVKPTYTFYGSKQKFTNAKNPV EADVKEKKKAFDMDVELYLYNTTNLYKNGKFAVDFNFEGGYDAYSFHQYRKVAKGNQDLL VASAKREYSLYALPTIEAGYQATEFVKLYAAAGAEYRNWKETNENSAKNWRWQPTAWAGM KVNF >gi|224531373|gb|GG658179.1| GENE 96 100231 - 100827 844 198 aa, chain + ## HITS:1 COG:FN0931 KEGG:ns NR:ns ## COG: FN0931 COG0494 # Protein_GI_number: 19704266 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Fusobacterium nucleatum # 1 196 1 196 205 131 40.0 8e-31 MQIQNVLHAGKYKCAAVMICFYKEKDETYIVLEKRANGIHQGGEISFPGGKRDFKDIDFK ATAIRETSEELGISEDKIEYLGYAGTFIGIFDLFLDVHLCKLKIEKKEELLYNKQEVEYL IFLPLSYLERTEPIMEIAELKNIPKFDVRAYGLPSRYWDTWPYYERNLYFYFYQGEVIWG ITAEILFSWMKGKKKEKL >gi|224531373|gb|GG658179.1| GENE 97 100824 - 101300 659 158 aa, chain + ## HITS:1 COG:FN0930 KEGG:ns NR:ns ## COG: FN0930 COG2870 # Protein_GI_number: 19704265 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Fusobacterium nucleatum # 1 153 7 159 160 220 75.0 7e-58 MILDRKLASIMVEEAKKQGKIVVFTNGCFDILHVGHLRYLQEAKRQGDILIVGVNSDASV RRLKGKDRPINSEKDRAEMLCGLESVDYTVLFEEDTPVALLEELKPSIHVKGGDYKKEDL PETEIVEKHGGEVRILSFVEGKSTTNIVNKIQKNEGCE >gi|224531373|gb|GG658179.1| GENE 98 101297 - 101764 640 155 aa, chain + ## HITS:1 COG:FN0929 KEGG:ns NR:ns ## COG: FN0929 COG0802 # Protein_GI_number: 19704264 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Fusobacterium nucleatum # 1 155 1 153 153 157 61.0 8e-39 MRKKLYFQELDILADSLANYAKEDTFIALIGDLGTGKTHFTQRFAKSLGVIENLKSPTFN YVLGYESGRLPLYHFDVYRLTEAEELYEVGYEDYLRENGVILMEWANLVESELPDEYIRL ELHYTEEENQREVELRYIGNEEKEKELFTYVNFGN >gi|224531373|gb|GG658179.1| GENE 99 101745 - 102413 182 222 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 43 216 1 180 380 74 30 6e-12 MLILGIDTSTKLCSVALYDTEKGILGELNITVPKNHSNVILPMIDQLFLFTEKTIEDVER IAVGIGPGSFTGIRVGMAIAKGLAIGKKIPIVGVSGLDALAASVREKGRVFALLDARKSR VYYRIFEDGKALCEAKDGNLKDILQEYQGAEINYFIGDGALAYQDMILEAYGKKACILSE ESSVARALYFAKMAVDQEEDNLYTLEPMYVCKSQAEKSKENV >gi|224531373|gb|GG658179.1| GENE 100 102516 - 102836 364 106 aa, chain + ## HITS:1 COG:MT4033 KEGG:ns NR:ns ## COG: MT4033 COG0526 # Protein_GI_number: 15843547 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Mycobacterium tuberculosis CDC1551 # 2 88 7 95 116 85 38.0 2e-17 MSGVIHLNESSFSEDLLQNHEKVLINFWAEWCGPCKFVNHILEELAQEENLIICLINVDK NPKLMQKFQIETIPNVLLYSHGKLIEQVKKLDKLIMKEEIRKKILA >gi|224531373|gb|GG658179.1| GENE 101 102931 - 106545 4892 1204 aa, chain + ## HITS:1 COG:no KEGG:FN0610 NR:ns ## KEGG: FN0610 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 16 1169 3 1129 1155 741 37.0 0 MKDKRILLALFLVLSINAATYAQEVEGRADEVEIDLNTNTMTSESGIVLKQSNMKTKVHT VQRDTDAGKAYYRDGIIAQVDNETGKVKIESQEGEANTTGDEAHFYKNFGYLEVAPVTGA EVPNDRVYFGSDHISYKDEKIYIDKGWMTTDFKVINHSQNPKEISYHILSDQIVIEPDKH LTIYDSNLYLGKHKTLPMEFPWFRLNIRGGSKVPLFPNWSEKEYYGWQTSWGVLYGNRSS KLKGGIAPKFADDMGWLIGRSETWYDTKRYGTAQLNVTDLLLHSKVKGKKDSVDAVKYEQ KHKRYHVETKHDYDGEYGSFHFSGINATTSMISSLDELITKYEANKEFDNTAGLRGSGVY LDRPGFDKNVAYYSVNSDLHGMGKNKDIRFQASSRLTTDKKLYTLSTYDNVEDNVFDTKG DNALYTNVSLYQDNTRYKLGGYYNYLYDITPGYTRKYDRSRGEDYGFVALDKKNTLGIQY DEIRGDKLRGLHLWETESNATALKRSNLLGLPIDYTPVAVSEYSIYNQQNGKLLLGDYSC GKLHIKPSIATKREEKQLDLLENEKIVITDNSSANPENYIAKGGYDRFRQYNRFNNEVYE KRKENKANINIIEDDSLNVNVFGGNQKEEIWTREGMISGKIDDVTKLKSESSFYGFDIEK KFGTLALRGDLRQDDYRHSDGSSLRYGLGLNHKVNLYEKEDVKVSNDLDIYMQKYRYSGG KEEDKAQNLYTKKDSYQIKDTLSWDTKAVHTQYSGEYQVDKNPIYHSDKKAEKLKQKINF QVGEDKKIGLFYDRNDRYTNRIVNKFKNYKDLSTENYGGNFDYGPHSFAYERQNIDFQFP KIAKEEIEADSFRYSYRWDDKSLGFSYRTGKDSVLMNEFHDSKVLDIDNKVYGVNFHKNG DIQHHFYFNYENSRHREGSSKVNLEGSRKNIGHTDEINFSYQYRDTRMKDAEYIKYASLE TGKAENELSVQDIERVKSLWEDKKVIEDPFHLTGIRDDAFLFGDGRVNFRFYTSLERNKA RYEKTHNLGDSLQKIKGAMYYTYNRYGLGYTFEENAGWLKNNSQYTWKKKNREHQISLYG KMGKPSESWKVKTYAKFYENLLDKVNADKKHKRALDGIGVEIGKEFDFYEWSVLYERKYS LTTRDYEWRLGLQFTLLTFPDNAIFSLGANKSSQKVRPKTQFMDSVNIEKIVDNELKTEV IMQK >gi|224531373|gb|GG658179.1| GENE 102 106560 - 108473 2811 637 aa, chain + ## HITS:1 COG:FN0611 KEGG:ns NR:ns ## COG: FN0611 COG0441 # Protein_GI_number: 19703946 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 19 635 1 618 620 1003 77.0 0 MKIEFLDGKVQEFHEACNMFVVAKSISNSLAKKAVAAKIDGELYDMSYVLDHDAKVEFIM PESEEGVEVIRHSAAHLMAQAVIRLFPGTKVTIGPAIENGFYYDFDPKEQFTEEDLTRIE EEMKKLSKEDIKVERFMMSREEAIEYFEKLGEHYKVEIIKEIAKGEQLSFYRQGDFVDLC RGPHVPSTGHIKAVKLKSVAGAYWRGDSKNKMLQRIYGYAFATEKDLKDFLKLMEEAEKR DHRKLGKELELFFLSEYGPGFPFFLPKGMVLRNTLIDLWRAEHEKAGYVQIDTPIMLNRE LWEISGHWFNYRENMYTSSIDDVDFAIKPMNCPGGVLAFKYQQHSYRDLPARVAELGKVH RHEFSGALHGLFRVRAFTQDDSHIFMTEEQIESEIIGVVNLIDKFYSKLFGFQYSIELST RPEKSIGTDEIWEKAETALAGALNHLGREFKINEGDGAFYGPKLDFKIKDAIGRTWQCGT IQLDFNLPERFDVTYIGEDGEKHRPVMIHRVIYGSIERFIGILIEHYAGAFPMWLAPVQV KVLTINDECAPYAKEVVAQLKAQGIRAELDDRSESIGYKIREANGRYKIPMQVIIGKNEI EKREVNVRRFGSQAQESMELDAFLAMVKEEAKVKFKD >gi|224531373|gb|GG658179.1| GENE 103 108603 - 112007 3293 1134 aa, chain + ## HITS:1 COG:FN1386 KEGG:ns NR:ns ## COG: FN1386 COG0553 # Protein_GI_number: 19704721 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Fusobacterium nucleatum # 245 1133 1 891 892 880 55.0 0 MNLYYIYHSCFAVEGKSHILIFDYYKIPKEKATEREYFFNRYIRQQEKKVYVFSSHSHED HFNPEIFSWKEENQEIQYILSKDIQGNFPEEIKLFWMGEGEQRDIDDLKIFAYGSTDAGV SFIVYMEEKIIFHAGDFHLWHWEDDTEEEEETMRKEYFRILKTIQKDKHSMIDYAFLPVD PRLGRYTTEGLENFVKELDILQVIPMHFWENYFVMEEAKAILDEYGVQLVAVKQPMEMIH GIFYMLKKEERGYYIDLVDSYGKAVSEEEIELDPIYPYIPMEQKDVFFAGWDKKWDRIFL EDQEELLQFLKEQDHFVKENFEKITWKKGKYSLILCIREKKGEEGIYTSQIELSEVDEDI SIITEDIVANGSFYSLKNKRTGLYDLKDFITELRFPEVEKLMTLAHKHFPEMELRYRDYK TVEVETIIVKPQILIEKIASDNSLYLRISAEVSSMDYKFLKDNDFEEVVTLNLREKKIQI SKIDTSPVRELVEELVKILVKTQRELGIRQAYYLDEDYFLILPENVAREFITKNLLQFAN QYQIAGTDKLKKYNIKAVKPRITGNFHYSIDFLEGEAEIEIEGEKFSIQEVLSSYQKDSY IVLSDGTNALINKRYIEKLERIFKESEDNKVKISFFDLPIIDDIIEEKILSDEYVLQKNF FYGMNHLKEYQVSLPKLNATLRSYQEYGYKWLSYLSEKHLGACLADDMGLGKTLQAIAIL TKLHQEKKKSLIIMPKSLIYNWQSEIEKFSPGLKVGIYYGNHRDLQVMEEQDVILTTYGT VRNDIVLLKEFFFDLVILDESQNIKNIHSQTTRAVMLLQSENRIALSGTPIENNLSELYS LFRFLNPGMFGSLEEFNNTYALPIQKENNPEAVQDLRKKIYPFILRRVKKEVLQDLPDKI EKTIYIDMNVEHKKFYEERRNYYYNMIHASIREKGLGKAQFFILQALNELRQITSCPEVK NSYISSSKKEMLIEQIVEAVENDHKVLVFTNYIGSIENICKSLEEREIAYLSMTGSTKDR QQLVNKFQKNEKYKVFVMTLKTGGVGLNLTAADTIFIYDPWWNKTVENQAIDRAYRLGQD RTVFSYKLILKDTIEEKILQLQELKSKLLDDVISEDNLSNKSFTEKEIEFILGK >gi|224531373|gb|GG658179.1| GENE 104 112023 - 113783 1821 586 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_1473 NR:ns ## KEGG: Ilyop_1473 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 1 584 1 584 586 506 47.0 1e-142 MNQKKERCREAMFQFYQRENLFRLYKTYLLDWIAEGYIGKELDVFSISMIGPTTEKETFL SLLEEVYFSKEIFQKVFTGLDQEVQKIFETLAWGERYYLSFEEKEKYYSEENRFLKELSG KYSFFRLSKDAKNRDYFELHYDILRYIRQFMKKPKEIHLQAVHSPKYMKKENNEEEILEN LTKYFEFYEQGGIALSSSGKILKESKLNMKKYCNISEYYIDAKDLDYLKTETISLFFFLL KDEYKRVDYFQANNIKTIVQDLLSTELVKEEKYAYCSLFLNFLKGVKNIWQHSENLKECF QSILEVLEELESGMLVSVDNIIKSILFQDKFYELIDIQDVKDYIYINEANYERTRITNYD RYRDYIVIPFIKSFFFLLGTLGIFELYYNMPDEDSYLYLKNGYLSKYDGLQYIRLTKLGE YVLGKTEHYEFKKVTEESEILLDEEHLIITLLGDAPTKTMFLERIGQKIASNKYKVTKES FLRNLEENSSLQERIEEFHSKIPNPKPQIWIDFLEELAVKSRAIIWKPEYRVLKLKEDKE LISIVSKDKRFQEFILRGEEYHIFVKEENMGALSKLFKEYGYYMNW >gi|224531373|gb|GG658179.1| GENE 105 113800 - 117234 3769 1144 aa, chain + ## HITS:1 COG:FN1383 KEGG:ns NR:ns ## COG: FN1383 COG0587 # Protein_GI_number: 19704718 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Fusobacterium nucleatum # 3 1137 4 1132 1133 1151 53.0 0 MGDFVHLHLHTEYSLLDGVGKIEDYMKRAKSLRMKAIAITDHGNMFGALEFYQKAQKYGL KPIIGVEIYLSEYPLAEKKGRNFHLILLAENYEGYQNLMKLSSLAYLEGFYYKPRLDKEL LKKYSKGIIALSACMNGEIASYILEGAEESKIEATILEYQDIFGKENFYLEVQAHEEIEQ QQVNEALYAFGKKMKIPLVATNDTHYVNKGEHILQDVIICIQTGSHLSDEKRMRIEMQDL YLKSYEEMYAVLGEQYQEALQNSVEIAKRCQLWIPMHEFQFPDYNLPEGISSLEEYLKKL TYEGLGKRYPQGLDERIVERVEYELSIINKMGYAGYFVVVWDFISFARSRKIPIGPGRGS AAGSLVAYALEITQLDPLEYRLIFERFLNPERISMPDIDIDICQERRQEIIDYVVQKYGQ DKVAQIATFGTLKARAAIRDVGRVMDVELSKIDKAAKCIPMFASLREVLEENIELKTMYQ QDVELKNVINTAMRIENKVRHISTHAAGVLITKKSLTESVPLYADSKNGIVSTQYQMKEL EELGLLKIDFLGLRTLTILQRTQDYIEENTGKKIELSEIPLQDKTVYEMLSKGDSFGVFQ MESRGLRSILKRLQPNSFGDIVALLSLYRPGPLGSGMVDDFIDRKHGKKAIEYPHPSLEE VLKETYGVILYQEQVMKIANIMADYSLGEADLLRRAMGKKNVEIMHENRSKFIERSIKKG YSREKAEEIFDLIDKFAGYGFNKSHSAAYALIAYWTAYCKVHYPKYFYAALLSSEISDID KISFYFADAKAHGVEIETPDVQFPSSRFVVKGDKILFALSAIKNVGTGISEKIKEEREKK GEFRSYEDFVERMKKEGLNKKGLEAFIYAGALDSLSGNRHEKIESLDKVLDYVQRKAKAD DIQQMNLFGDSKKNLVQFSLSRIEEYPMEVLLEKEKEFLGFYVSANPLDRYESLYQSFDF DEFNIIKEENMEREVWLYGIIQNLKKTRTKKGDAMAFADLENYQGQIPMVIFPKVYQENG FLLVDKSIVFVKGKVQIDYFRGEEIKKVIVQKLFSFEHFLSQSSLRVYLHIVEQEMDVYP KLKESLLQYRGGETELYFALQGKEGKKLRKSSFSIHLTLSFLEEVSRIIGKNRIKIKWKE SEHR >gi|224531373|gb|GG658179.1| GENE 106 117247 - 117654 577 135 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_1471 NR:ns ## KEGG: Ilyop_1471 # Name: not_defined # Def: biotin/lipoyl attachment domain-containing protein # Organism: I.polytropus # Pathway: not_defined # 1 134 1 137 139 79 33.0 6e-14 MKLDHHNIQEMMKIVNQYQLEELSYEGEQGKITLKASSNPRIIRKESVEKKEVKKVENSK FIISEAIGKYFFLRENGKAYIEVGQELKVGDTIGYVTSIGISTPLISKFSGVIEEILVKN GDVIDYGKKLIKIQE >gi|224531373|gb|GG658179.1| GENE 107 117678 - 119021 1940 447 aa, chain + ## HITS:1 COG:alr0939 KEGG:ns NR:ns ## COG: alr0939 COG0439 # Protein_GI_number: 17228434 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Nostoc sp. PCC 7120 # 2 442 3 444 447 523 58.0 1e-148 MFQKILVANRGEIAVRIIRAAKELNIKTVAVYSEADRDSLHVRLADEAVCIGGNTSADSY LKIPNIMAAAEATGADAIHPGYGFLSENAKFAEICMSHEITFIGPRIDCIQNMGDKATAR ATAIANEVPVSRGTGIVQDVEEAVKRVEEEIQYPVMIKATAGGGGKGMRIAFSEEELREN MVAAQQEALAAFGNGDVYIEKYIEEPRHVEVQVLGDNYGNVIHLSTRDCSIQRRHQKMIE EAPAFSVPFKIQNEMGEAAVRLAKAIQYNSAGTLEFLVDKNNQYYFMEMNTRVQVEHTVT ELVTGIDIIQLQIRVAAGEKLNIKQQDVAVFGHAIECRINAENPKDFLPSPGIIQQYIAP GGNGIRVDSHSYTGYEISPYYDSMIGKLIAFGVNREEAIAKMKRALSEYIIEGVETTIPF YLEVLNNENYQKGNVTTAFIEENFSGK >gi|224531373|gb|GG658179.1| GENE 108 119090 - 119452 612 120 aa, chain + ## HITS:1 COG:FN1619 KEGG:ns NR:ns ## COG: FN1619 COG1302 # Protein_GI_number: 19704940 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 108 1 108 122 134 82.0 5e-32 MSELGNIRIADEVIKTIAAKAASEVEGVYKLAGGVVDEVSKMLGKKRLTNGVKVEVGEKE CSIEVYIVVEYGYKIPVVAQAVQEAVLKTVSDLSGLKVVEVNVYVQNVMDREEPILEEDL >gi|224531373|gb|GG658179.1| GENE 109 119502 - 120038 657 178 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_1468 NR:ns ## KEGG: Ilyop_1468 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 1 168 1 167 177 84 29.0 2e-15 MGKKLLFFLAWLGIFCIGIFNIIYLVLPSLITRYISISSFMLETAILVLSVLYVLLAVYK LLTKFERNKDYQVETPNGTVVIAASTINKYVVEVLQKNFPVQSTKVRSYNKRSGILIDAK MDMVLSKNVADSIQEVQTKITEEVQDKLGIQIKKIKVHLSNMAVKEEAKVEVSEEEVK >gi|224531373|gb|GG658179.1| GENE 110 120040 - 120264 331 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452281|ref|ZP_05617580.1| ## NR: gi|257452281|ref|ZP_05617580.1| hypothetical protein F3_04385 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_00535 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 74 1 74 74 106 100.0 7e-22 MLEEYIARFVLHMSQSYRKYIGGFFGFLIGVLWLQFGFFPMLFVCLCAILGYKLGDLKIQ KKIKRKILEKLKED >gi|224531373|gb|GG658179.1| GENE 111 120273 - 120677 699 134 aa, chain + ## HITS:1 COG:BS_yqhZ KEGG:ns NR:ns ## COG: BS_yqhZ COG0781 # Protein_GI_number: 16079488 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Bacillus subtilis # 1 129 1 124 131 91 38.0 3e-19 MTRREAREELFKWIFQTEIQGNSVEEAFEHSFLREEIEKDEVSKVFLERYRKGMVEHQEE VAEKIEAAMTDWDLPRIGYVEKSLLKIAVYEIYFEDLPVEIIVNEAVEIAKIYGDVKTHE FINGVLAKVIKMKK >gi|224531373|gb|GG658179.1| GENE 112 120753 - 121310 572 185 aa, chain - ## HITS:1 COG:FN1615 KEGG:ns NR:ns ## COG: FN1615 COG1971 # Protein_GI_number: 19704936 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 181 1 180 183 99 35.0 5e-21 MNFIAVFLIGVGLSMDAFAVSICQGLIQIGQNKKEMEKIAFTFGFFQFGMTFLGGMAGKI LVPFVKNYEHIIPCIIFCGIAIFMLKEGWENRNNSCEAVSHLDSFKTLFLLGVATSIDAL FIGITFALQVNYPLFWASILIGCTTFVISAFGYYFGKSFSNLSKNKAYYLGAFLLFALGI HSFIG >gi|224531373|gb|GG658179.1| GENE 113 121395 - 122897 2033 500 aa, chain + ## HITS:1 COG:FN1614 KEGG:ns NR:ns ## COG: FN1614 COG0606 # Protein_GI_number: 19704935 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Fusobacterium nucleatum # 5 498 5 497 497 573 59.0 1e-163 MNFCIYSSAYLGVTPYVIEVEVDISAGLPTFSIVGLGDTAILESRYRVKTALKNSGYLLS PKRIVINLSPAGLRKEGAQYDFPLAVTLMYLSGYLKDPYQKLKKYLWLGELSLNGKLKSV KGLINTAILAKEKGFQGIIIPKDNLEEASLIEGIQVIALSSLKEVQEFLLDEEERDDRLS ISEEEFIFPYDFSEVKGQSHAKRALEISAAGGHNILMIGSPGSGKSMLAKRLPGILPPMS LEERIEATKLYSISGELDGKKLSLQERPFRAPHHTTTEIAMIGGGKKMMPGEISLASGGI LLLDEMNEFKKSVLEALRQPLEDRVVRITRALYRLEYQADTILVGTSNPCPCGYAFENNC RCTASEKYHYQKKLSGPILDRIDLYVEMRRLTEEELLADREEESSKEIKKRVILARKIQE ERYGNTFHTNAKMTQEERKQYCSLSEEDKEFFKVAFAKLEISARGFTKLLSVARTIADLA GREKIEREDLLEALSYRRKF >gi|224531373|gb|GG658179.1| GENE 114 122944 - 123912 956 322 aa, chain + ## HITS:1 COG:FN1613 KEGG:ns NR:ns ## COG: FN1613 COG2805 # Protein_GI_number: 19704934 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Fusobacterium nucleatum # 1 312 3 310 316 241 45.0 2e-63 MEKLFVKYRKLGASDLHIREEAKLCYRKNGDLYFSEEIVSNRDFDEFCQSLGILKEEQER DSSYEDSFGHRYRLNFAKGEKGRMLSVRIISEFLPEFPSELYIVLKDLFTSKHGLVLVTG STGSGKSTTLRFFLEQYNESYAKKIICLEDPIEFYYQEKKSLFFQREIGRDSESFETAMK AALRQDPDILLIGEIRDLQSLYTALSFAESGHLVFSTLHTGNCVETIHKMISFSSKEKQE EIRQRLSSSLRWTIAQELVKGKEGGRVPIFELLKNTKAVANMISSGREVQLPSVLESSAS QGMCSKEQSRENWIRKGKLERI >gi|224531373|gb|GG658179.1| GENE 115 123915 - 125297 1397 460 aa, chain + ## HITS:1 COG:FN1612 KEGG:ns NR:ns ## COG: FN1612 COG0635 # Protein_GI_number: 19704933 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Fusobacterium nucleatum # 1 454 9 468 469 520 60.0 1e-147 MNKRSIEEFMRVMLPEALEEELKIEEIPDGVKIQIAGKEVEFCYPDLGKAVDDQKQTMVK LALLKAYQKDYVWGGLMGVRPSKIVRRFLKEGFSYKEVLEHLEHFYLVKKEKAKILVDIV KKEETFLHRGASNLYVGIPFCPTKCSYCSFASYEISGGVGRYYKEFVNTLEKEIRFTGEQ LRKQPQQIESVYFGGGTPSTLTEEDLERILKVFREEIDFSFVREFTFEAGREDSITLKKL EILKKYGVDRVSLNPQTFQEKTLARVHRKFNRRHFEEVYEDCKRLGFILNMDFILGLPEE TTEDILDTLEQLKQFDVENITIHSLAFKRASKLAKGSQEREEIDRKKIEEKISSLMREKK LEPYYLYRQKNMLDWGENIGYAKIGMESIFNMEMIEENQNTIALGGGGISKVVVEEENGH DYIERFVNPKDPALYIREMEERQKQKFALFEKYRKEKNEV >gi|224531373|gb|GG658179.1| GENE 116 125287 - 125808 598 173 aa, chain + ## HITS:1 COG:FN1611 KEGG:ns NR:ns ## COG: FN1611 COG1555 # Protein_GI_number: 19704932 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Fusobacterium nucleatum # 24 171 7 154 159 118 48.0 4e-27 MKYRKEIGVFFLCFSFFFLTKYSFAEKEVKIIMSQGNMKENQKGKVDINIANKGEFLAAG IASRYTDGILEYRNAVGAFEHLEELKNIKGIGEATYHKLSKRLEIGTKKNRNPLFINRAD KKILSYYGFSKKEIKAIEKYREKEGRISNNIILKKIITKKQYEKYKDLFRYSK >gi|224531373|gb|GG658179.1| GENE 117 125820 - 126680 1423 286 aa, chain + ## HITS:1 COG:FN1610 KEGG:ns NR:ns ## COG: FN1610 COG1281 # Protein_GI_number: 19704931 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Fusobacterium nucleatum # 1 282 1 280 285 298 53.0 1e-80 MGRVIRGLSKNARFVAVDTTDIVQEAMEIHHCNLLAADSFGRLLTVASLMGNSLKGEDIL TLRTDTNGQIKNILVTADSNGNVKGYLSNNTPDVSDTPLLGEGMLKVIKDFGLKDPYIGF CQMSSHGLAYDLSGYFYTSEQIPTVIAFTVLFRDEHTVEKAGGYMMQLLPNAEESFLEAL EQKVGAIRSIDELFHGGMDLEDIIALLYDDMNSEEKRVVEEYEILEEKEIQYHCNCDRDK FYRALITLGKEEIDKILQEDGKLEAECHFCGKHYEFREEDFKHEEN >gi|224531373|gb|GG658179.1| GENE 118 126667 - 127425 968 252 aa, chain + ## HITS:1 COG:FN1343 KEGG:ns NR:ns ## COG: FN1343 COG0084 # Protein_GI_number: 19704678 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Fusobacterium nucleatum # 1 252 7 258 258 371 75.0 1e-103 MKRIDSHVHLNDERFDVDREEVLQRIQEEMDFVVNIGYDLESSQISLDYARKYPFIYATV GLHPAEEEEYTEELEKIFERMAKEEKVLAIGEIGLDYHWMVKSKEEQQEIFRKQLALAER LGKPVVIHTREAMEDTVKILKEFPTIKGILHCYPGSVETAKQMIDRFYLGIGGVLTFKNA KKLVEVVKEIPLEHLILETDCPYMAPTPYRGQRNEPIYTKEVAMKIAELKGISYEEVVEV TNQNTRKAYGML >gi|224531373|gb|GG658179.1| GENE 119 127422 - 127766 387 114 aa, chain + ## HITS:1 COG:FN1342 KEGG:ns NR:ns ## COG: FN1342 COG0736 # Protein_GI_number: 19704677 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Fusobacterium nucleatum # 1 111 1 120 122 103 55.0 6e-23 MIRGIGTDIIEISRIEKAMKKIQFLQKVFTEKEQEEQKARGEKMESYAAIFSAKEAIVKA MGTGFRGISFTDIEILHDDLGKPLVYLYGIAQNNWHISLSHCKEYAVATAIWEE >gi|224531373|gb|GG658179.1| GENE 120 127776 - 127985 344 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452271|ref|ZP_05617570.1| ## NR: gi|257452271|ref|ZP_05617570.1| hypothetical protein F3_04335 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_00585 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 69 1 69 69 123 100.0 4e-27 MEKKKVIVCRGMTCGKKNQKMWEALSKREDIILEEVRCFGQCKKGPNVKIDGQIYHFMDL EKVEWFLNK >gi|224531373|gb|GG658179.1| GENE 121 127995 - 128069 82 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDILECKREYADLREQLEDIRRSL >gi|224531373|gb|GG658179.1| GENE 122 128116 - 129096 1347 326 aa, chain + ## HITS:1 COG:FN1341 KEGG:ns NR:ns ## COG: FN1341 COG1186 # Protein_GI_number: 19704676 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Fusobacterium nucleatum # 19 324 1 306 308 453 79.0 1e-127 MEEGFWNDKRSSSAVIKTMNEEKALLASFQSLVEEMEEEEVLIEFVEAGDEMSQIELEEK HKQLLKDMESFSTSLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWCNDKKYK VEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTSFASVEV VPEVDESVEVEIEASDIRIDTYRASGAGGQHVNMTDSAVRITHFPTGIVVTCQKERSQLS NRETAMKMLKSKLLEIELKKKEEEMKKIQGEQSEIGWGSQIRSYVFQPYTMVKDHRTGVE IGNIKAVMDGDLDDFMNGYLRWNKKK >gi|224531373|gb|GG658179.1| GENE 123 129149 - 130012 933 287 aa, chain - ## HITS:1 COG:PA3829 KEGG:ns NR:ns ## COG: PA3829 COG1073 # Protein_GI_number: 15599024 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Pseudomonas aeruginosa # 7 284 7 291 307 82 25.0 1e-15 MTIEKFEIYSEKKKLHGRKYLANVEKRKKKTILMCHGFAGIQDLFFPAYAEKFVEEGFDV ITFDYNGFGESEGTTEIVPNHQIQDILNIILYIKRDEILQENKLFLWGTSLGGLYVLKVA TLSKEIAGLYAQITFANGLRNNTLGLDEEGVQKYINQIENIKYKEIKDNKVLLLPLKRLL SDEQSKAFLEDYKDIFPELMATKLSLSTIKQINELCIDNDLAMIQVPVLLGKAMQDKVNS PMEMNFIYEHLQSDKKLLELDCGHYEIYVGEAFEKAIQEQISWFEKI >gi|224531373|gb|GG658179.1| GENE 124 130183 - 131682 1957 499 aa, chain + ## HITS:1 COG:FN1340 KEGG:ns NR:ns ## COG: FN1340 COG0008 # Protein_GI_number: 19704675 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Fusobacterium nucleatum # 2 497 12 514 516 810 78.0 0 MEKKIRTRIAPSPTGDPHVGTAYIALFNLAFANHNGGDFILRIEDTDQNRYTEGSEQMIF DALHWLGLDYAEGPDVGGDYGSYRQSERFDLYVKYAKELVEKGGAYYCFCTSDRLDNLRE RQKAMGKAPGYDGHCRSLTKEEIEAKLAAGEPYVIRLKMPYEGETVIHDRLRGDIVFENN KIDDQVLLKADGFPTYHLANVVDDHLMGITHVIRAEEWIPSTPKHIQLYKAFGWEAPEFI HMPLLRNSDRTKISKRKNPVSLIWYKEEGYIKEGIINFLGLMGYSYGENQEIFSLQEFID NFNIDKVSLGGPVFDLVKLGWVNNHQMRLKDLEELTKLAVPFFEREGYIANFETYKKIVA IQRESAQTLKQLAQESKTFFEDEYELPVVTEDMNKKERKSVEKLHASLEDEVGKKSIALF LEKLNAWKQEQFTAEEAKDLLHSLLDELQEGPGKVFMPLRAVMTGQARGADLYNVLYVIG KERAIKRIHTMLDKKGIQL >gi|224531373|gb|GG658179.1| GENE 125 131837 - 133654 2221 605 aa, chain + ## HITS:1 COG:FN0321 KEGG:ns NR:ns ## COG: FN0321 COG0326 # Protein_GI_number: 19703666 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Fusobacterium nucleatum # 1 605 1 607 607 751 69.0 0 MRKEEKIFQAETKELLHLMIHSIYTNQEIFLRELISNASDALDKFKFQSLTDDSLERGDA LEIHLSMDKEKREISIEDNGIGMTYEEVNENIGTIAKSGSKAFREKLEAAQKSEVDIIGQ FGVGFYSAFIVADEVTLETKSPYGETGVKWSSKGDGAYEVEEIEKENRGSKITLHVKEGE EFDQFLEEWKIKELVKKYSDYIRYQIKMGEDTLNSSQPIWKKAKSEVKEEEYKEFYKSNF HDWQDPLLHFPLKVQGNVEYSALLYIPQKAPFDFYTKNFKRGLQLYTKNVFIMDKCEELI PEYFSFVSGLVDCDSLSLNISREILQQNKELEVISKNLEKKIITELKKLWKNDRETYVKM WEEFGKNIKFGVQDMFGMNKEKLQDLLIFQSTLEDKYVSLKEYVDRMGEAKEILYVAGDD LTTMKSLPKMEALKEQGKEVLLFTDKIDEFTIRVLQEYEGKKFKSISDSDFVLEGSEEKQ EEAKKAAEEHKDLLAEVKDILGDKITEVNFSANIGNVASSLLSKGAISLEMEKVLSEMPG NEKVKAEKVLALNPEHPLIQRLQEEKNEEDKKNLVSVLYNQARLLEGFAVENPAEFIKSM NALLK >gi|224531373|gb|GG658179.1| GENE 126 133626 - 133751 95 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSYNLVLSDDAKKQLKNHPKISLGWFSSFLLFPISTKHSYS >gi|224531373|gb|GG658179.1| GENE 127 133811 - 135109 1654 432 aa, chain + ## HITS:1 COG:CAC0607 KEGG:ns NR:ns ## COG: CAC0607 COG1362 # Protein_GI_number: 15893896 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 1 431 1 431 433 474 53.0 1e-133 MKKEISFAKDLMEFLDKSPCAFFAVEEMKARLQAKGYEELQEQDAWDLKKNGKYYVTKNN SAILAFQIGSGEIEKEGFHIIGSHSDSPCFRVKHNPEMSVEGKYLKLNTEVYGGPILSTW FDRALSLAGRVTVKGKDAFHPKSLFVNIQEDFMTIPNLCIHMNRGVNDGTSWNAQKDTLP FLATLEKGMEVEGALQRKIADLLAVKIEDILGMDLFVYDREKAKIIGMKQEFVQSGRIDN LGMAHASLEALLTSKKSKACNVILVSDNEEVGSMTKQGANSPFLKNTLRRIVLSLGKGEE EFMRALANSFLISSDQAHALHPNYTEKQDLTNRPVLNGGVAIKIAANQAYTSDAHSIAVF TGICQKAKQKYQFFHNRSDMKGGSTIGPITTTQLDIPSVDIGNPILSMHSVRELLGIQDH YSLYQIFQEFYK >gi|224531373|gb|GG658179.1| GENE 128 135234 - 135455 247 73 aa, chain + ## HITS:1 COG:no KEGG:PG1526 NR:ns ## KEGG: PG1526 # Name: not_defined # Def: hypothetical protein # Organism: P.gingivalis # Pathway: Homologous recombination [PATH:pgi03440] # 4 73 406 475 479 89 58.0 5e-17 MGPTIHDTIHDKLESVLEFCKAPKSREEIQSFLKLKNRSHTMKFYIQPLLEGGKLRMTFP EKPKSKYQKYIKK >gi|224531373|gb|GG658179.1| GENE 129 135500 - 136381 1277 293 aa, chain - ## HITS:1 COG:CAC0679 KEGG:ns NR:ns ## COG: CAC0679 COG1597 # Protein_GI_number: 15893967 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Clostridium acetobutylicum # 1 292 1 290 295 306 53.0 3e-83 MQKVKFIYNPISGSANTPKMLDTVIATYQKYNKTIVPFRIGENFPLEMAFEDIHENYEHI LIAGGDGTINRTINLYLQKNLSLPIAILPTGTANDFAKYLSMPMDIEEACEKILKAEVKK VDLGKVNDKYFINVFSFGLFTDVSQKTPTHLKNTFGKLAYYFNGIKEIPRFTKIELRVES EDLTIQTKCFLAFVFNGQTAGNINIAYNSQIDDGLLDVILVKGENLLKLGNLVYNFLRGE HLEEADKENILYFKSKALTLSSIQEITTDIDGEAGPQLPTQITCIPKALNILF >gi|224531373|gb|GG658179.1| GENE 130 136546 - 138231 945 561 aa, chain + ## HITS:1 COG:jhp1312 KEGG:ns NR:ns ## COG: jhp1312 COG2194 # Protein_GI_number: 15612377 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Helicobacter pylori J99 # 224 549 219 550 553 164 33.0 4e-40 MSEYLSIVINQKGNFLFCFLWILIGENIFVWRIEYGKFHKRFFEKLGNAFFFLLMLSFFI TIFSFYFPKISYVILILLGVLSVTEMVFYCEYDSLFTNNTFLVLNETNLQESKEFLHDLF SWKLFRNLCVISFFLVLLPIFLSPIFVQLMDHRIGRYFLFFLLFLGGIDFLQAHRPKKIE RYYMYVPFFRILREYYFFVEQRKANIESLKIQQQVEKELSKIDSKNENIDTLIFVIGESS SRNYLEIYNSYGGYLKNSPYMKARMEKGDLFVFDDVISSESLTALSIPKMMTLKNYEQEK AWYYYPSMISILKKAGYTTYWISNQMKHETVGKVFSSLSDYYFFSEDLDDKTPEKFDGVL LEEGLKILKEEKKKAIFFHLQGSHNTYSKKYPKEFDIDTVENITGRVISLKKKKYLAEYS NSLRYTDFILEKIFTTFSKEKSVCFYLSDHSEEFWENREFRGHSGDKGSRFMVEIPMFIF LSQSVREICPNIEEACKRSLHKPYMSDDIIHTVLGILGIKSSGYEKARDLLSTDFDIARK RMYQGKNYDEFWKLQKVTREV >gi|224531373|gb|GG658179.1| GENE 131 138239 - 139288 892 349 aa, chain + ## HITS:1 COG:FN1247 KEGG:ns NR:ns ## COG: FN1247 COG0859 # Protein_GI_number: 19704582 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 5 326 12 349 379 233 42.0 4e-61 MWKKFQSFMRKYRLIVGKYYWDRKKKHRICLNGNFIQENNIQSLLFLRQDGKVGDMVVHT MIFKAIKTKYPRIKIAVITRGAAQNIIEKNPYVDKIYEYKKKEIKDLAKKIAKEYYDILV DFSFMLRVRDMQLISLCKAKYNFGVNRENWNLFDVNIPFSFQEHISSLYLAFLKKLGIEE VETGYELFFENKQENRREYIVFNPYAASNNRSFHENMILKISEKLLKYTDLDLYIIGEET RRGELKKVSEKLGKRVHTFVSRSISEIFPLIHHAAFVITPDTAIVHIAVALQKEMIAIYR KDRKGDFNSILWGPNFKKAYVLYSSENDVNDWERENWECLENRIKQILK >gi|224531373|gb|GG658179.1| GENE 132 139305 - 140039 473 244 aa, chain - ## HITS:1 COG:no KEGG:FN1240 NR:ns ## KEGG: FN1240 # Name: not_defined # Def: lipopolysaccharide core biosynthesis protein RfaY # Organism: F.nucleatum # Pathway: Lipopolysaccharide biosynthesis [PATH:fnu00540]; Metabolic pathways [PATH:fnu01100] # 1 226 4 218 240 126 39.0 7e-28 MNILKKRMHNSYTVYGKEENLYLAEEFLNQNYETIEIFKDTKRNYVSKIKIQKKYYILKS PRSEQILIQKKILSFFKRGEALSTLLNVNYAIQNFHFTELVMPYVAITKKGFFLKESFLI MEYVEGRDFEKEEDFIKLIDWIQNFHRKGFYHQDLNTSNVCIQNDKLRVFDTQAKRESFS YYHRSYDILTLKQDLLVLEKNFPIEKYYPLPKNIGSLMAKFIKYWKYNPISLYFREKKQK AREK >gi|224531373|gb|GG658179.1| GENE 133 140036 - 141244 1079 402 aa, chain - ## HITS:1 COG:FN1245 KEGG:ns NR:ns ## COG: FN1245 COG0438 # Protein_GI_number: 19704580 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Fusobacterium nucleatum # 5 375 3 369 381 228 38.0 2e-59 MKKIKVLFRSGSLRMGGLERVLVEVLQNINKTDLDIHLLIDDETEEDIFRKDIPLDIPYH FLKSNQFMKQLELVRKEKNKSILSKLKYNLYMHKARKLCKLETLKYISQQGPFNVLIDFD AGATRYMENIPIPHKIVWIHNSIPRLLKKESKIKHFGKRLEKYTKIVAICDDMKEELQHL YPNIAHKITRIYNPFNFDRIEELQQDTSSLTEEQKTLLKNEYCVMVSRLSCIQKDYNTLL KAFQKVKNKGISDFLYIIGDGPDKEKIQKMIQNLNLEDSVFLLGLMKNPYVWMKHSKLLV HASKYEGFGLVLVEALTCGRMVISSDCPTGPREILNEESCGKLVPVGDDTTLADALISFL SDKTARQEKEEHVRSSRNRFHRDTIIREYENLIFSVLGEENI >gi|224531373|gb|GG658179.1| GENE 134 141434 - 142393 933 319 aa, chain + ## HITS:1 COG:no KEGG:Sterm_3101 NR:ns ## KEGG: Sterm_3101 # Name: not_defined # Def: ADP-heptose:LPS heptosyltransferase-like protein # Organism: S.termitidis # Pathway: not_defined # 6 277 22 300 301 74 24.0 7e-12 MQGNGIFITATDGIGDNIVRLCILEKMLTMFGKERCWILCEKKTKDFMRKIGFQHIIVFE PEHRKRVMGKFNLLKKIFQIPLQEIVSLEFDQHDFPIEFFSNTSTTGYDNIFHPEINQYY KRSIENKSGNIENAVLHFYNEYFQEKLSIEEILPDITKYYRGVEEIKGVMTVGIGAGDRY KIMAPSVLGKILQRMIEIKKLHQVILLGFGPKEQKYVEELRKYISFERYYVDTKVGKLSF EETIAEIQKSQYYLGMDSGLFHVAASLRKQTFGLFTKKNPFTHDFWDNVTVFYGKESQVE DYYGNSILNGISIEEILDE >gi|224531373|gb|GG658179.1| GENE 135 142386 - 143342 641 318 aa, chain + ## HITS:1 COG:YPO0187 KEGG:ns NR:ns ## COG: YPO0187 COG0463 # Protein_GI_number: 16120528 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Yersinia pestis # 1 245 1 251 329 124 28.0 3e-28 MNDIELSIIIPVYNVELYLRKCLDTIYPLQMKKEVILIDDGSQDNSFGIMQEYKDKFPEE TIIISQENKGISDVRNRGLEVALGKYVAFLDSDDFIDTIKYEEFFKRLKQEEVDILHGNG FYYQIDEKKEKIFETEDSIFIDTTLLGKEFYEKGYNLQIHRDYVWLNIYRREYLLENSLF FREGITYEDKIFSQEAFWKAEKIRYVPMFFYYYRQNSESITRKPRNVLDYFYVHNCLLDF ALQEKISNLFVTKEIISIVRSLSKKEKVFNEEIYKKLWKLPKKNFLAYRNLLDMYFRKKK LKKINYEDILMKGHKKEG >gi|224531373|gb|GG658179.1| GENE 136 143343 - 144290 803 315 aa, chain + ## HITS:1 COG:no KEGG:CGSHiEE_07675 NR:ns ## KEGG: CGSHiEE_07675 # Name: not_defined # Def: N-acetylneuraminic acid synthase-like protein # Organism: H.influenzae_PittEE # Pathway: not_defined # 78 308 69 289 292 156 42.0 1e-36 MKKYLCISATNYNLLLFCLLKDFLGRTVFWVSPNLYSPDQEDFFLLSEAAFSKERKSENE RRFHQIEKGYFSEGDFEIYAQDHILPSYSFIRGKFSVIEDGTMSYLEVKREYEREKKRWF LSRWKRNMKGKIAKCGVSSKVDKVYLRGILPTPSCIQHKVEYIDIHSLWKKKTEEEKKWI RRFFNFRQSNLELLESKKIILFTQPLSEDKVMTEEEKIEIYRKILEKENVKDVVIKMHPR ELTEYDKHFMGISILQERTPFELYLLHGLKDKKVITLFSTAVYGLKDFEVVFYGTNGNRK LLDRFGEILSTTIMK >gi|224531373|gb|GG658179.1| GENE 137 144313 - 145107 787 264 aa, chain + ## HITS:1 COG:FN1246 KEGG:ns NR:ns ## COG: FN1246 COG3475 # Protein_GI_number: 19704581 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Fusobacterium nucleatum # 1 259 1 261 261 242 54.0 4e-64 MYNPNELRKIQLKKLEMLKDIVHCCEKNNLTYWLDSGTLLGAVRHKGFIPWDDDIDIAMP LEDAKTLNEIYSSEDYEIRSTEIESGVNFYKVISKKDFVCSGDEVLKVDIDIFVMQYYPN SLFLKFFNAFYHLRKNRSEEFQWKLCLENISINLRRKFEKIGYFSSKSLAEKIRKICERN PKKWDFVSYTYDCGFHLYFWKKNEIFPLGVMLFEDTYFKVPKDYHIYLKKLYYSYEKLPP VSRRRPPHYTNYEITLFHKKKEEE >gi|224531373|gb|GG658179.1| GENE 138 145338 - 145682 332 114 aa, chain + ## HITS:1 COG:L142326 KEGG:ns NR:ns ## COG: L142326 COG0110 # Protein_GI_number: 15673486 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Lactococcus lactis # 13 114 100 200 200 77 37.0 6e-15 MMVKFFLEKGSYSTIQLTRGTKVFIGNDTAISHNVRICTSNRNPMDVIFEKDSIEIERGD VIIGDNCWIGANVFICQGVKVGDCVVIGASSVVSKDIPSNSIAAGAPIKILKSK >gi|224531373|gb|GG658179.1| GENE 139 145702 - 146406 775 234 aa, chain + ## HITS:1 COG:Cj1143_2 KEGG:ns NR:ns ## COG: Cj1143_2 COG1083 # Protein_GI_number: 15792468 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-N-acetylneuraminic acid synthetase # Organism: Campylobacter jejuni # 8 224 1 212 218 123 38.0 3e-28 MYCGKKILAIIPARGGSKGIRRKNLIEIGGLPLIVYTLKETQKSKYLDRTIVSTEDLKIK TVVENYGGEVPFLRPMELAQDNSKTIDCIVHAIEVLKSYGEIYEYVVILQCTSPLRKAWH IDEAIEKIIDRGEASLVSVSKVEEHPILMRTLNDDGTLKNLLNINSTVRRQDFSNIYKVD GAIYIQKIDEELNENTSLNDGRLAYIMEKQYSVDIDEYLDIHKVEFYLKELQKD >gi|224531373|gb|GG658179.1| GENE 140 146425 - 147288 744 287 aa, chain + ## HITS:1 COG:MTH1791 KEGG:ns NR:ns ## COG: MTH1791 COG1209 # Protein_GI_number: 15679779 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Methanothermobacter thermautotrophicus # 1 282 1 282 292 382 62.0 1e-106 MRGIILTGGKGTRLYPVTQAISKQILPIYDKPMIYYPLSVLMLAGIREVLIISTPRDLNL FRDLLGDGKKFGLFLSYATQENANGLAEAFLIGESFIGEEGCALILGDNLFYGRAFTETL QKAITLEKGAIIFPYYVQNPKEFGVVEFDEEGKIISLEEKPKHPKSNFIIPGLYFFDSTV VEKAKRVKKSKRGELEILSILEMYLAEKKVFSFHLGRGMMWFDTGTEDSLLDSANFIKTV QQNQRIVIACLEEIAYQKGWITKEMVIQQAEKMKKSKYGKYLFSFIS >gi|224531373|gb|GG658179.1| GENE 141 147344 - 148771 1270 475 aa, chain + ## HITS:1 COG:FN1698 KEGG:ns NR:ns ## COG: FN1698 COG1091 # Protein_GI_number: 19705019 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Fusobacterium nucleatum # 195 468 3 296 298 202 40.0 2e-51 MLKFEKKETELEGVYIIHTVKFEDERGYFSEVYQKDSFRDLGIQENFIQENVSFSKKGTL RGLHFQTKKKQGKLLRVLEGKIYDVIVDLRKESSTYGKYIGIELSSKDQNLLWIPPDFAH GFLSLAEKNIIQYQCTDSYDMEYEEGILWSDQDLNIDWKLDEYGFSEEELIISEKDKKQK KFVDYERFEKEKSILILGGNGQLGKEFQKFLQKKMIEYQAIDKDALDVSNEKKCREFFIQ KHYCCVINCAAYTNVDLAEKEKEECKAVNTDAVRIWTKMCEEKEIPFITFSTDMVFDGKD EFPYTEEDMPNPVNWYGKTKLEGEKFALQYSRSLVIRTSWLFSTEGDNFCKKALLWAKNQ ETLRIVDDQISSPTSVEDIAVFTWKLYQKACFGLYHMSGMGESSKYDQIRYLLSLFSWKG RIERAKTEEFWNLANRPKYSKLCCMKLYGALGLSLPYWKKSIQYFAKNLRDKNLF >gi|224531373|gb|GG658179.1| GENE 142 148799 - 149905 1130 368 aa, chain + ## HITS:1 COG:FN1667 KEGG:ns NR:ns ## COG: FN1667 COG1088 # Protein_GI_number: 19704988 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Fusobacterium nucleatum # 1 362 1 375 399 430 57.0 1e-120 MKTYLLTGAAGFIGSNFIKYMLKKYPERMYILLDKLTYAANLKNIKEELKKANVIFVQGD ICDSLLVKEIFVKYNIDYVVNFAAESHVDRSIANPRIFLETNILGVQNLMDRARECWSIG KDEKGYPIYASGKKFLQISTDEVYGSLEKDIPDGKELSFQEEDLNQLIYGRRETKAYGNQ FFTEETPVNPNSPYSVSKTSADLLVKAYYETYHFPMNITRCSNNYGQFQHEEKLIPLMIK SALSGKELPVYGDGMNVRDWLYIEDHCKAIDMVLSSGREGEIYNIGGFNEKTNLYIIHII LEEIAKYEKSKPRTELIRFVEDRLGHDRRYAINPRKIVQELGWYPETTFEDGIKQTIQHF MKEWKVRN >gi|224531373|gb|GG658179.1| GENE 143 149908 - 150462 507 184 aa, chain + ## HITS:1 COG:no KEGG:FN1240 NR:ns ## KEGG: FN1240 # Name: not_defined # Def: lipopolysaccharide core biosynthesis protein RfaY # Organism: F.nucleatum # Pathway: Lipopolysaccharide biosynthesis [PATH:fnu00540]; Metabolic pathways [PATH:fnu01100] # 2 178 3 174 240 151 47.0 1e-35 MKLQKEKYLGYVLYFYDEKYKEIGKKIIEKQYREIQRLKDTARNFVSVIEIDTEKFIYKE PRNEYRLPQRRYMSFIKKGECLNSLINITYLREVLKITEYIKPFLSIVKRQKGMISYSSL LMEYSSGVSTVGHFDMIVDIMKRIHKLGYYHGDCNPSNFLLEEKGKQKYIRVLDTQGKNG TYKI >gi|224531373|gb|GG658179.1| GENE 144 150443 - 150634 185 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257465952|ref|ZP_05630263.1| ## NR: gi|257465952|ref|ZP_05630263.1| hypothetical protein FgonA2_00700 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 51 1 51 63 65 100.0 1e-09 MGLTKYRAHYDMLTLKLDSYQEMEYPYTIDMAYHVALCIKKMKKLKCIKWLKDKRRVRRE RKK >gi|224531373|gb|GG658179.1| GENE 145 150654 - 152291 1810 545 aa, chain + ## HITS:1 COG:no KEGG:FN1654 NR:ns ## KEGG: FN1654 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 541 28 566 571 503 49.0 1e-141 MKKALPIGITNFQELIEGNYYFIDKTKLIEDILKDRSKVTLFTRPRRFGKTLNMSMLQYF WDIESAEENRKLFQGLHIESSPYFLDQGKYPVIFLSFKDLKAESYDMMLYSIQYAISTLF DQFHFLSKDLQDFNAMIFKKILLGEANIVELQNSIKFLAKVLTQYYQKKVVILVDEYDTP VVSAYEHGYYEKAISFFKVFYSSALKDNEYLQTGIMTGILRVAKEGIFSGLNNLAVYSIL DEKYSSYFGLTEEEVKHALQDYELEYDIQSVKEWYDGYLFGNTEIYNPWSIISYIVNKKI EPYWINTSNNFLVYDLLEKANINIFEELQNVFQGKEIQKTIEHSFHFQDMSNPQEIWQLL VHSGYLKIEKSLGNHRYTLKIPNQEIQSFFEKSFLNRFLGGVDIFYEMITALKERNIEIF EKKLQDIFLTKVSYYDVGQEEKYYHNLVLGMILSLSKEYDIHSNLESGYGRYDISLEPKE KNRVGFILEFKIAKSEEELEKKSKEALLQIQEKRYDIEMKEKGILEIVKLGIAFYGKKVK INEHL >gi|224531373|gb|GG658179.1| GENE 146 152327 - 153193 528 288 aa, chain - ## HITS:1 COG:FN1668 KEGG:ns NR:ns ## COG: FN1668 COG4750 # Protein_GI_number: 19704989 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes # Organism: Fusobacterium nucleatum # 1 287 1 287 290 310 62.0 1e-84 MKRNAIIMAAGTSSRFLPISYEYPKAFLKVKGEILIERQISQLKEAGIQDITIIVGYKAE QFQYLEKKFDVQLVYNCDYSIYNNTSSLIRVLDKLKNTFICSSDNYFSQNVFIEQTDFSY YSAIYQEGKTSEYCLTYNQNNEITKVEIGGENSYVMLGHVYFTEDFSKQFIDILKKEYQL EENRKKLWEQIYMEHLDKLILKIKKYPKNIIYEFDSLDELRQFENNFDSNSKILKEISNF FHCKEKELSNFTKKENTETIFSFYFCYRGEKYVYELEKIENKFNIALV >gi|224531373|gb|GG658179.1| GENE 147 153190 - 154122 681 310 aa, chain - ## HITS:1 COG:FN1669 KEGG:ns NR:ns ## COG: FN1669 COG0697 # Protein_GI_number: 19704990 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 1 309 1 308 308 253 49.0 3e-67 MNIKTKGILFGIISAILWAFNSLLLTIYIQESVYFFAPLFFAFFHDIFSAFYLFLNIFRK KENRKQLLSILRKKAFFIMFGAAILGGPIGMASFLMASKYIGSSYASSISVLYPIAGAIL GKLFFHEFLNSYKKLAILLSILGISILSFTTEGLTAYPHYDLGIFFALLCVFGWAFEGLI ASYFMTEINISSEVAIFIRQLCSSVFYILCVLPFIGGFSMIPLLIPTISILKIILLSAFL GAVSYLFWYKAIDILGGPIGMLLNSSYVVWIVFLEILLARVQIELKFIITLVCILSSIFL LIKDSKGEKE >gi|224531373|gb|GG658179.1| GENE 148 154106 - 155902 1652 598 aa, chain - ## HITS:1 COG:FN1670_1 KEGG:ns NR:ns ## COG: FN1670_1 COG1213 # Protein_GI_number: 19704991 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar nucleotidyltransferases # Organism: Fusobacterium nucleatum # 1 334 1 334 334 298 54.0 2e-80 MNEYLLELIKDFPQITQRQIAKKLQISLGKVNQLIIDLEKDNMIVRKKHKKEQYQILEKG LRYMEKMYQEKYPQTAIILAAGISKNDTIPVSLSKIGNEIILERSIRLLLHRKIEHIVII CGYQAEQFQYLTEQYPQVEILFNPEYKTKGSFFSLQLGLKTYSKNILLLDGDILYEEKAL DHILQFPSNNTILVSSEKGYRNESFVEEVNGKLYHLSKDIRELKNYQGEMLGISKFSKEL SEAILKLEVHNPHFSYEYAIAECASQLPIEVLKIDRLLWADVSFPENFSHITNVLYPAIQ KVENKKEKIHIKNILLEELKIKEEEIDFIEPLGGMTNYNFKVGINHNIYVLRNPGVGLGN LINRKNEYSNISAIQDLQLDADLFYFQEQKGIKITKYIENAETLNPTTAKQNLEKVAVIL KKLHTSNIIFQNTFDVFQEIQKYESRIKSSIETQFPSYTETRKKVLQLEKELNEMGRNFV SCHNDTVAENFIVSQDRIYLIDWEYSGMNELEWDLAAFCLENNLSSELSKKFLQIYFSGK ENVNHYKKVLIYQICQDFLWSLWTILKEEHGDDFGDYGINRYTRCIKLLEVLENEYKN >gi|224531373|gb|GG658179.1| GENE 149 155966 - 157369 1611 467 aa, chain - ## HITS:1 COG:no KEGG:FN0687 NR:ns ## KEGG: FN0687 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 465 1 463 467 456 53.0 1e-126 MYVAVTGRGKARVIQFCEQHRIPGTKKKKTIVIRTLGNYEKMLEKNPNILVELKEEAKRI TEQKKEKTKETSTSLFRFGHSLVKKVWEEMDLNSIFEEKFLQDIFSLVVYRLGSSYTNFR TNRKTPFANLESISYENFYYILEHLAEKKESLIQHLGKFFNKKTARSNELAYYHISSYNY NSYWKDLHGSSRFFLQREKEDLPFSMVLLLDRNGIPISYDLFTKKFILEQQLEEVKQKSG IEKLVILSANRNKIEKKEYILPVDFLDLPFSLQLQIIAEEDWEITETNEETGEVLSKEKT VHFDNQLKVYASWSKKRAFKDYVEGNQKNGYYYISTNDFSIKNTEMLKMFQHIWNIEEKF RITNVDFERKHIHGHFCLCFLCLCIIRYFQYLLGSEGKASIPMIYANKAISNPMVLIEGK DKESRVHPLHLTNSYLKLAKLLGIEKVDEGMSLESFENAINLFINPK >gi|224531373|gb|GG658179.1| GENE 150 157523 - 159010 1929 495 aa, chain + ## HITS:1 COG:FN1359 KEGG:ns NR:ns ## COG: FN1359 COG0747 # Protein_GI_number: 19704694 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 495 1 495 495 723 74.0 0 MKKIAGWKQFCLIALLAAIFSACGKEEAKLDELKTVSAVDIDSLNPYQVVSSASEQLLLN VFEGLIMPASDGSIVPALAESYEISEDGKTYTFTIREGVSFHNGNPMDIHDVEFSLNKMA GKLGDAPTEGLFENIEKIEVLDDKKIAIHLGKPDSSFIYYMKEAIVPDENKDHLTEVAIG TGPYQVGEYQKEQKLVLTKNENYWGEKAEIPKVSILVSPNAETNFLKLLSGEINFLTEID SKRLEELKEFTIASGPRNLCLILALNNQEKPFNDVEVRKAIDLAIDKEKIVQLAMNGHGT VIETNMSPVMKKFLWEGKGEKANPARAKEILEKKGLLPMHFTIKVPNSSKMYLDTAQALR EQLKEAGIQVDLETIEWASWLSDVYTNRKYVASLAGLSGKMEPDAILRRYTSTYKKNFTN FHNDNYDKLVAEAKLSADEKVQIHNYKEAEKILREEQAAVFLMDPDSIIAMEKGLEGFEF YPLPYLNFAKLHFKK >gi|224531373|gb|GG658179.1| GENE 151 159023 - 159937 809 304 aa, chain + ## HITS:1 COG:FN1360 KEGG:ns NR:ns ## COG: FN1360 COG0601 # Protein_GI_number: 19704695 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 304 1 304 305 417 75.0 1e-116 MYYIKKGIRMILSIFFIGTCSFCLLEWIPGDPATAILGVEASAKDIENLRQQLGLDLSFG ERYWNWIYGAFHGNLGTSFKYGESVSKLILERLPLTLSIAIFSIVLVFLVSIPFAFALHN IKNKKIRNFWESILGIFISIPSFWLGILFMYFFGIILRWTSTGYNDSYRSLVLPCCIIAI PKIGWITMHLYANLYKELREEYIKYFYSNGMKKRYLNLYILKNAILPIVPLTGMMLLELV TGVVIIEQIFSIPGIGRLLVSSVFTRDIPLVQGLIFYTSTFLVLMNFGIDILYSLIDPRI RLGE >gi|224531373|gb|GG658179.1| GENE 152 159939 - 160715 890 258 aa, chain + ## HITS:1 COG:FN1361 KEGG:ns NR:ns ## COG: FN1361 COG1173 # Protein_GI_number: 19704696 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 21 258 18 255 255 334 75.0 8e-92 MEKKTKKFLAFFLGIFLLLAISAYHNPYQVSENLTLARPSVEHILGTDNLGRDIFSRLLI GSFYSVSIAFLAVLLASILGSFLGGIAGYFEGYLDETLLFFSETLMSIPAILITLGIIVI FRAGFYSITLAIFILYTPRCINFVRALVKQEKHKNYIKMAKIYGVGHFRILFRHIGPNIF LPILVNFSTNFAGAILTEAGLGYLGFGIQPPYPTLGNMLNQSQSYFLTAPWFTIAPGFVI VVLVYQMNQIAKKYQEKK >gi|224531373|gb|GG658179.1| GENE 153 160716 - 161417 313 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 19 221 38 261 329 125 32 4e-27 MELLHVENLNLWIREKPLLQQISISISDGEIVGLVGESGSGKTLFTKCILGTLPESANLY YDRFEVKAELGAVFQNAFTSLNPTMKIEKQLRHLYLSQYGNDIGWKEKVEELLEKVGLDK NRNVLKKYPHELSGGEQQRVVIVGALLGEPKFLIADEVTTALDVQTKQEIIHLFQTLRDD LGIAILFITHDISLLQNFATKMYVMYQGELVDKEHPYGKKLFQLSQNIWRRER >gi|224531373|gb|GG658179.1| GENE 154 161417 - 162166 269 249 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 234 1 239 245 108 29 5e-22 MLDFENVSKDYGEKAILKNVSFSVKKGEIFGILGQSGAGKSTIGKLLLQMIEKTEGKILF EGKELKEVSRREIQTVFQDPYSSLNPSLTVGQILEEPLLANGIKDKSERRKKVIETLYKV GLLESDTEKYPSELSGGQRQRVCIAGAIILSPKLIVCDEPIASLDLAIQEQILQLIYRIN QEEGITFIFISHNLPAIYRIADRILLLYQGEVQEIQNVLDFFYHPKSEYGKKFLQNTKAI ENHIEKKAV >gi|224531373|gb|GG658179.1| GENE 155 162193 - 162996 935 267 aa, chain + ## HITS:1 COG:BH0086 KEGG:ns NR:ns ## COG: BH0086 COG1521 # Protein_GI_number: 15612649 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Bacillus halodurans # 1 250 1 251 254 143 32.0 3e-34 MIFLIDVGNTNIVIGISDGEKIINTLRTETIKEKDFDYVPVLKDLLCQKEKIRKVEGSIL SSVVPEVTKKLMEAIKSIYKVDTLLVDEIIDESLNIQIDSPEKLGMDLKVDAVAALKKYP SPQLIFDLGTATTCSVLDENSCYIGGAIIPGLKVSLNALIEATSQLPMIDCSIPIAEYIG KNTQDCMRIGALCGHALMLEGFVREIQKKFSKPLHIALTGGLSTIVSQHMNIETTFDPYL TLEGLLYLYQDFHKMGGNNEEQKETDQ >gi|224531373|gb|GG658179.1| GENE 156 162968 - 163228 196 86 aa, chain + ## HITS:1 COG:no KEGG:FN0686 NR:ns ## KEGG: FN0686 # Name: not_defined # Def: integral membrane protein # Organism: F.nucleatum # Pathway: not_defined # 6 81 19 94 104 95 61.0 6e-19 MKSKRKQINKEALLTVGMYLVYFVWWYYFAYCFGEEEVSQYHYILGLPEWFFYSCVLGLV VMNVLVFFVIKFFFQDMDLEEEDKKC >gi|224531373|gb|GG658179.1| GENE 157 163222 - 164667 2311 481 aa, chain + ## HITS:1 COG:FN0685 KEGG:ns NR:ns ## COG: FN0685 COG4145 # Protein_GI_number: 19704020 # Func_class: H Coenzyme transport and metabolism # Function: Na+/panthothenate symporter # Organism: Fusobacterium nucleatum # 10 480 13 483 484 584 67.0 1e-166 MLVSIPILLYLLLMLYIAFRVNKKKRNSNNFAEEYYIGSRDMGGVVLAMTIIATYVGASS FIGGPGVAYKLGLGWVLLACIQVPTAFFTLGILGKKLGILSRKLNAVTLLDVIRARYQSD IVVILSALMLLIFFLGSVVAQFVGGARLFESVTGAPYIVGLILFSVVVITYTTIGGFRAV ALTDAIQGFVMLFATFILFWIILKKGNGMENIMRTIADINPDLLRPDSGGNIAKPFILSF WILVGVGLLGLPATTVRCMGFKDTKALHQAMVIGTSVVGLLMLGMHLVGVMGLAIEPNVE VGDKIIPILALNHLHPILAGVFIGGPLAAIMSTVDSLLIISSSTIIKDLYLHYVEKDAGE AKIKKLSTYCSLGFGVLVFLLAVRPPELLVWINLFALAGQEALFFAPILFGLYWRKANSF GAIASMLAGVSTYLYTTIMKTPIFGMHAVVPALLISVIAFITGSFFGKAPEQKTLKIFFE D >gi|224531373|gb|GG658179.1| GENE 158 164722 - 165123 721 133 aa, chain + ## HITS:1 COG:Cgl1127 KEGG:ns NR:ns ## COG: Cgl1127 COG0494 # Protein_GI_number: 19552377 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 1 129 1 129 131 95 43.0 2e-20 MKKHLQVVGAMLVNKEGRILSTLRPLGKKLGNYWEFPGGKVEPGETKEEAVVREILEELD CHIEVEKEVGENTLDYGDVIITLTVFQCRMKDEVTVKEHDAFVWIKPENLLSLVWAPVDI PILEKIVEEKKGE >gi|224531373|gb|GG658179.1| GENE 159 165127 - 166146 1270 339 aa, chain + ## HITS:1 COG:L178384 KEGG:ns NR:ns ## COG: L178384 COG2855 # Protein_GI_number: 15672357 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 6 330 3 317 331 189 40.0 8e-48 MNVQKIVPGLLLSILIAMISQFLIKLPAFSTLGAALIAILLGMILGNTVCKKSFYDEGTK FSEKRLLEYSIVLNGLILDIIVMKQVGLQGIGFIICLMFLTIGIAYIISRKFGFGKKFSL LMGAGNAVCGSSAIGTVAPILEADSKDKGISITCVNVLGTILMIALPVLSSILYSSDTLL TSALIGGTVQSIGQVIASAKLVNDSVVEMSTIFKLIRVLLLVGIALMFDMLNLEEGKPLF SLKLSKMEGNKKRTKVGIPWFILAFLFCFLLRSTGYIPAPVLFWAKKISTQFEIIALAAI GLRVKFSDILKEGVKAFGVSLLIGLSQVIFALGLIKVFF >gi|224531373|gb|GG658179.1| GENE 160 166148 - 166579 597 143 aa, chain - ## HITS:1 COG:FN1853 KEGG:ns NR:ns ## COG: FN1853 COG2185 # Protein_GI_number: 19705158 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) # Organism: Fusobacterium nucleatum # 7 138 5 136 136 116 45.0 1e-26 MQSQNYKILIGVIGEDIHETGNKIIAQILEHDGFEVINLGIQVSPSSFVEHAKKDDVTAI IVSSLYGKAKEDCKHLMKLFQEDSLFHPPIYLGGYLASPQENWKEVENFFLNLGFTRVYK PGTPIEKTIADLREDLMIPYETF >gi|224531373|gb|GG658179.1| GENE 161 166794 - 167255 614 153 aa, chain + ## HITS:1 COG:FN2023 KEGG:ns NR:ns ## COG: FN2023 COG0779 # Protein_GI_number: 19705319 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 4 153 7 156 156 162 54.0 3e-40 MESVVQKIEKIVIPAAEELGLSLVDVEYMQDGGYWYVRVYVEKLEGDVNLEDCASLSGKI EDAVDQLIDKKFFLEVSSPGIERPLKKESDFIRFTGEKIFVALKHKLNEKRNIEGILRAY ENQTLLLEVDGEELQIPFSEVKKSHLVFDFDEF >gi|224531373|gb|GG658179.1| GENE 162 167272 - 168333 658 353 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 10 352 11 350 537 258 40 4e-67 MTNKDARAFLEALDELEKEKGIEKESLLQAVEQALLTAYKKNYGDEENVEVVIDRENGDV KVYEVKTVVTEEDLYDAALEISLEEAKKISRRAKLGEEVRIEVDCESFRRNAIQNGKQIV IQKVREAERENIYDRFKAQEGEILTGIIRRIDERKNVFIEFGGIETILTAGEQCVSDRYK VGNRIKVYLVEVEKTNKFPKIVISRRHEGLLRKLFELEIPEISSGAIEIKAVAREAGSRA KVAVYSELPNIDIVGACIGQKRARIKNIVDELGGEKIDIVIWKENMEEFVSAVLSPAKVN SVELLEDGETARVLVDESQLSLAIGKSGQNARLAAKLTGMRVDIKVANAELED >gi|224531373|gb|GG658179.1| GENE 163 168335 - 168856 446 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237742963|ref|ZP_04573444.1| ribosomal protein L7Ae [Fusobacterium sp. 4_1_13] # 4 171 8 176 176 176 49 1e-42 MAVERTCIICRKKEEKKTFFRLCQREDKYYWDKTGKAQARGYYVCPSKECLGRLAKHKKI KVEMQDLYEMIKEVERYEKNYIGIFQTMKHSNMLTFGMKMVLEEIEHIHLLIVATDISDK YARQLEEQSSERKIPLEYFGTKEELGKVFGKEEVNVIAVKDKKMARGLVDKMK >gi|224531373|gb|GG658179.1| GENE 164 168873 - 171014 3173 713 aa, chain + ## HITS:1 COG:FN2020 KEGG:ns NR:ns ## COG: FN2020 COG0532 # Protein_GI_number: 19705316 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Fusobacterium nucleatum # 1 713 1 736 737 963 75.0 0 MKLRVHELAKKYAVKNKEFLEILNTEIGIEVTSHLANLDEAQIEKVEEYYSRLSKAEEKE EKKAPKVNKGKDKQHKKNLPITLEEEEEEEIVEVVERKNKKHKKKKGRRTDFVVKTVEAG PAVIEEDGMKIIKVKGEITLGDFAERLKVNSAEIIKKLFLKGQMLTINSPLPFELAEELA MDYDALVEREEEVELEFGEKFDLEIEDKKEDLVERPPVITIMGHVDHGKTSLLDAIRTTN VVSGEAGGITQKIGAYQVERDGKKITFVDTPGHEAFTDMRARGAQVTDIAILVVAADDGV MPQTIEAISHAKAAKVPIIVAVNKIDKPEANPMRVKQELMEQGLVSVEWGGDVEFVEVSA KKKMNLDTLLDTILITSEILELKANFKKRAKAVVLESKLDPKVGPIADILVQEGTLRIGD VIVAGEVQGKVRALVNDKGDRVKSVEVSQPVEIIGFNQVPQAGDTMYVIQNEQHAKRIVE EVAKERKIAETTRKTISLEALSAQLEHENVKELNLVLRADSRGSVEALRDSLMKLSNEEV AVNIIQAAAGAITESDIKLASASNAIIIGFNVRPTTKALREAELANVEIRTSRIIYHITE DIEKALSGMLEPEYKEVYLGRIEIKKVYRISKVGNIAGCIVVDGKVKNDSNIRILRNNIV IFEGKLSSLKRFKDDAKEVIVGQECGLGVENFNDIKEGDVVEAFDMQEVKRSL >gi|224531373|gb|GG658179.1| GENE 165 171030 - 171398 602 122 aa, chain + ## HITS:1 COG:FN2019 KEGG:ns NR:ns ## COG: FN2019 COG0858 # Protein_GI_number: 19705315 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Fusobacterium nucleatum # 1 120 1 119 120 144 68.0 5e-35 MKRQRLAGIEKEISRVISSVLFSEIKNPNIRGLVSVTKVRVTEDLKFADTYFSIMPPIAS EGQKPVEREKILEALEEVRGFFRKRIAEEINLRFVPEVRVKLDDSIEHAIHITKLLNDLK GS >gi|224531373|gb|GG658179.1| GENE 166 171403 - 173079 1884 558 aa, chain + ## HITS:1 COG:FN2018 KEGG:ns NR:ns ## COG: FN2018 COG0608 # Protein_GI_number: 19705314 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Fusobacterium nucleatum # 5 545 8 552 556 560 56.0 1e-159 MGGYNSEKLLSTLLKNRGIQDFSKLHEFINPSVSSFRDPFLFENMETIVSMLEKAKKEGS RICIYGDYDVDGITGTAFLVKVFRQIGMDTLYYIPSRDEEGYGLTKKNIDFLLEKGVKLV ITVDTGYNSLEDIAYAKSKSMEVIISDHHKTVREEGDEDILFLNPKLSQSYEFKFLSGAG VALKIAQALYQRLHLDLNELYQYLDIIMIGTIADVVPMVDENRIIIKNGLRILQKTKVKG LSYLLKYLKFGDKHINTTDVSYYISPLINSLGRVGTSRIAADFFIKEDDFEIYNIIEEMK KLNKKRRELEKNIYDDAIHSIEKNGKKGLKCIFLANRRWHPGVIGVVSSRLSLKFQVPVV LIALEGKLGKASCRSVRNISVYNILEEVKEDLVRYGGHDLAAGFTIEEEKVEKVRQYFME YLSRDTQAVERKKKYTIDMELPLEAIGENLLKDIEKISPFGSENPHPLFLEKNLNFREIR KFGVDQRHFNGTLVKAGREYPAVGFDLGHRIQLDTYLAQTFDIVYYPEKVNLHGEKMIQI RIKDIIIKDEFYDIFIKS >gi|224531373|gb|GG658179.1| GENE 167 173090 - 174379 2100 429 aa, chain + ## HITS:1 COG:FN2017 KEGG:ns NR:ns ## COG: FN2017 COG0544 # Protein_GI_number: 19705313 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Fusobacterium nucleatum # 1 429 1 429 429 382 50.0 1e-106 MKYEVKKLEQSAVAISMKLEGTEFLPIRDKVVAKIGKEVEIKGFRKGHAPADAVLAQYKD AVIDEVTQEVVNSNMETIIREKEIAPISTIRNPKVTMNDDSFEMDFEIDVYPEIKLGEYK GISAEKEAFEFKEEMLTQRMESMRTSKAKLVDCPEDHKAEMGDTVNLAFEGFIDGVPFEG GKADSHQLKLGTKSFIDTFEDQLVGYVKGQEGEVKVNFPEEYHAPELAGKPAIFKVKINA IQKMETPEMNDELAKELGFESVEDLKTKTTENIIAEGTQRAEDEYLGKLILKVVEASEFE VPVSMVQQEIQNEMRRFEQQLQQQGLSLDMYMQMMGGDRKAFEEQIRPMVEPRIKSDLVL AEIARNEKIEATDEDVTEKMAEVAKMYGMEVAKMEEELKAHNQLDAFKYSVRAEIVMKKT IDFIKAEAK >gi|224531373|gb|GG658179.1| GENE 168 174513 - 175100 1012 195 aa, chain + ## HITS:1 COG:FN2016 KEGG:ns NR:ns ## COG: FN2016 COG0740 # Protein_GI_number: 19705312 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Fusobacterium nucleatum # 1 193 1 192 193 280 71.0 1e-75 MYNPTVIDNDGRQERHFDIFSRLLRDRIIFLGTEVNDQVAASLVAQLLYLEAEDPTKDII LYINSPGGSVSAGLAIYDTMNYVKPDIQTVCIGQAASMGAFLLSAGTKGKRFALENSRIM IHQPLGGTGSGYHQATDVQIIAKELQATKEKLASIIAKNSGKTTEEVLEDTERDNYLTAE EAVNYGLIDMVMKAR >gi|224531373|gb|GG658179.1| GENE 169 175109 - 176380 267 423 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 167 412 258 448 466 107 31 8e-22 MKDKELEHCSFCGKSENEVAKLFAGRDGSLICDECIDQCYNMLMMDEEEEYLPATGDTIQ IQQMEMLKPEEIKEKLDDYVIGQERAKKILAVAVYNHYKRLLYKEKQEKKKSKDNDEVEL QKSNVLLIGPTGSGKTLLAQTLARILKVPFAIADATTLTEAGYVGDDVENVLVRLIQAAD YNIENAEKGIIYIDEFDKIARKSENVSITRDVSGEGVQQALLKIIEGTLSQVPPEGGRKH PNQPLIEIDTSNILFIVGGAFEGLGKVIQGRLHKKTLGFGADIQAPKEQVGEGEFLSQVL PEDITKRGIIPELVGRLPIIANLEDLDEKAFINILTKPKNAIVKQYQKLFQMEGVELEFT EEALAEVAHLAMSRKIGARGLRSILENTMLEMMYRLPSDSSIQKVILGKEAVLDHNKVEI IRN >gi|224531373|gb|GG658179.1| GENE 170 176390 - 178702 2773 770 aa, chain + ## HITS:1 COG:FN2014 KEGG:ns NR:ns ## COG: FN2014 COG0466 # Protein_GI_number: 19705310 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Fusobacterium nucleatum # 1 766 1 766 768 988 66.0 0 MEKTSFLPTRDLIIFPGVVTPIYVGRKDSLTTLEEAVKNKNKLILGLQKDPNVEEPDLDK GIYKVGILVSILQVIKMPNNNIKVLVEGESRVKISNVSLTNGHYEADYTFVRELAKKSKE TEAIFRKVFSYFEKYLSFAGKSAVELLVTLKNNKDFSLSFDVIAANLPITTDLKQELVEI FNIRDRGYRLLDILSNEMEIVSLEKKIDDKVKSKMNEAQKAYYLKEKISALKEELGDYSQ DDDILELVDKMKEANLPEEVQKKLENEVKKLSKMQLFSAESSVTRNYIETVLDLPWNNTT EDILDIKVSSDILERDHYGLKEPKTKVLDYLAVKKLNPEAKGSILCLVGPPGVGKTSLVK SIADSMGRAFVRVSLGGVRDEAEIRGHRRTYVGSMPGKIMKALKEAGTNNPVILLDEIDK MSSDMKGDPASAMLEVLDPEQNKSFEDHFVDMPFDLSKVFFVATANSLYPVSRPLIDRME IVELDSYTEYEKLHIAKQYLIKQARKENGLEKISLSITDKAISRIINEYTAEPGVRNLKR QIIKLCRKLARIVVEEGRETIKIGVKDLETYLGKPIYRKETRRKEETRIGSVNGLGVTSV GGCTLPVQAVTVPGKGGLSVTGKLGDVMKESVEVAFNYVKSNLDYYVPHDEEFFAKKNIH IHFPDGATPKDGPSAGIAITTAIISVLCNREIRQDVAMTGEVSLLGDVLPIGGVKEKVLG AHRGGIREVIIPEGNARDQEDIPEEIKGEMKIHIAKTYADVEKIIFADKK >gi|224531373|gb|GG658179.1| GENE 171 178713 - 179327 658 204 aa, chain + ## HITS:1 COG:FN2013 KEGG:ns NR:ns ## COG: FN2013 COG0218 # Protein_GI_number: 19705309 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Fusobacterium nucleatum # 1 192 1 192 194 280 75.0 2e-75 MRIKRADYLKSAVYEKDYPEILNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRT QLINFFTINQEFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISKRKKLVFVLLDIRRIPS EEDMEMLRWLDFHELPFKIIFTKTDKISNNEKFRLLKDIRKKIEFHNEDVFFYSSLSHKG REEVLQFMEDTLKEAGGNVDEGIK >gi|224531373|gb|GG658179.1| GENE 172 179311 - 181974 3109 887 aa, chain + ## HITS:1 COG:FN2011 KEGG:ns NR:ns ## COG: FN2011 COG0525 # Protein_GI_number: 19705307 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 885 1 885 887 1375 75.0 0 MKELSKTYSPKEIESKWYPIWEEKKYFAGKLEEGKENYSIVIPPPNVTGILHMGHVLNNS IQDTLVRYQRMTGKNTLWLPGCDHAGIATQNKVERKLKEEGLTKEDLGREEFLKRTWEWK EEHGGIITTQLRKLGASLDWDRERFTMDEGLSHAVRKIFVDLYKDGLIYQGEYMVNWCPS CGTALADDEVDHEESHGHLWHLKYPVKDSEEFIIIATSRPETMLADVAVAVHPEDDRYKH LIGKMLVLPLVGREIPVIADEYVDREFGTGALKITPAHDPNDFALGQKYHLPIYNMMTAE GKVSDEYPKYAGLDRFEARKVMVKELEESGVLVKIEELNHNVGQCYRCSTVVEPRVSKQW FVKTKPLAEKAIEVVRNGQVKIMPKRMEKIYYSWMENIRDWCISRQLWWGHRIPAWYGPD EHLFVAMDEAEAKEQAKLHYGKEVELRQEEDVLDTWFSSALWPFSTMGWPEKTKELELYY PTSTLVTGADIIFFWVARMIMFGLYEMKDIPFHNVFFHGIVRDDLGRKMSKSLGNSPNPL DLIDQYGADAIRFSMIYNTSQGQDVRFSEKLLEMGRNFANKIWNASRFVMMNLEDFDINT FDVKEVKYELVDEWIISRLQETAKAVETRLENFQLDDAAKAVYEFLRGDFCDWYVEIAKI RLYNLEDVQSKRTAQYVLWSMLESGLRLLHPFMPYISEEIWQSIKKEDAGETIVLAEYPK FEEEKYHQDLEEDFAYIQDVVSSLRNIRAEMGISPAKEAKVVVRSEDDRELQVLEKNRAF LQQLAKISELSYGKEIEKPAESAFRVAKNSVVYMILADLIDKEAEVKKIQDQIAKVQKDL DKVNAKLANEKFVSKAPADILEREKRIQKEYQDKMEKLVENLKNFMI >gi|224531373|gb|GG658179.1| GENE 173 182020 - 182892 970 290 aa, chain + ## HITS:1 COG:FN0503 KEGG:ns NR:ns ## COG: FN0503 COG0583 # Protein_GI_number: 19703838 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 288 8 295 302 333 64.0 2e-91 MDLHYLEIFYEVAKAKSFTKAASELYINQSAVSIQVKKFEEILNTKLFDRSSKKIKLTYT GEALYKMAEEIFDKVKRAEKEISKIIDLDRARLSIGASPVIAEPLLPRLMKGFSKAHEEI EYDLQVSEKENLLRMLKEGDLDVLIIDEERINNPNLEVLTIERVPYVLVSKKEYTNIQEI AKDPLITRKYVPNNNQAISILEEKYRITFEEKIPVFGNLSVIKGMINEEIANAILPYYAV YKEIQNGEYKTVYKITEIKDAYQVVITKDKKGLIQIIKFLNFIQDYRLQY >gi|224531373|gb|GG658179.1| GENE 174 182906 - 183484 766 192 aa, chain + ## HITS:1 COG:FN0502 KEGG:ns NR:ns ## COG: FN0502 COG0279 # Protein_GI_number: 19703837 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Fusobacterium nucleatum # 1 191 1 191 194 272 82.0 3e-73 MQLLDSYKTELALLTKFIEEEEERKETEKVARALAEVFRKKGKALICGNGGSNCDAMHFA EEFTGRFRKERPALPAISLSDSSHITCVGNDYGFDFIFSKGVEAYGQEGDMFLGISTSGN SQNVIEAVKVAKERKMITVALLGKDGGKLKGMCDYEFIIPGKTSDRVQEIHMMILHIIIE GVERILFPENYR >gi|224531373|gb|GG658179.1| GENE 175 183578 - 183760 256 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315917139|ref|ZP_07913379.1| ## NR: gi|315917139|ref|ZP_07913379.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 60 4 63 63 92 100.0 1e-17 MTNFIQNVVDEKTISLLGKEKMTQLLSSLQDLDKEFSSFGESEMKQLVDCLRTKVCELAK >gi|224531373|gb|GG658179.1| GENE 176 183943 - 185322 2137 459 aa, chain + ## HITS:1 COG:BB0366 KEGG:ns NR:ns ## COG: BB0366 COG1362 # Protein_GI_number: 15594711 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Borrelia burgdorferi # 11 457 13 457 458 506 53.0 1e-143 MFDKKQKWTGEEERIIFHFSEDYRQFLSKVKTEREFVKEGIILAEKNGFKAAETFTNYVP GDKVYYVNRNKNLVLVVIGQEDLEQGIHYVVSHIDSPRLDLKANPLYEELDLAYMKTHYY GGIKKYQWASIPLALHGVVVLESGEVIEISLGEEEKEPVFTIPDLLPHLAGKYQGDRKTS EVIQGEELQILVGSMPTKVETEEVKDKIKQNILEILKRNYGMEEADFVSAELELVPAGKA RDIGFDKSLIGAYGQDDRVCGYTSLRAILEITNIPMKTAVCFLADKEEIGSTGSTGLQSD FLNYFTGDILEKTKGSYHEMMLRRTLWNSRALSSDVNVAMDPIFKGVHDAQNAAKVGSGV VVTKYTGARGKSGTNDADAEYVAYIRKILNEGDVCWQTGMLGKVDEGGGGTVAMFLAHLG INTIDIGPGLLAMHSPFEVASKLDIYHTYKAYKVFYQAK >gi|224531373|gb|GG658179.1| GENE 177 185332 - 185799 664 155 aa, chain + ## HITS:1 COG:PA0995 KEGG:ns NR:ns ## COG: PA0995 COG0350 # Protein_GI_number: 15596192 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Pseudomonas aeruginosa # 4 153 5 160 173 158 53.0 3e-39 MKYYIKYVSPVADLYLVEEQGQLVEISYHHLKKKEEMEEKNTELLQEVKRQLEEYFSGRL QNFDLPLKPKGTDFQKQVWKALLTIPYGETKSYGDIAKQIGKEKAVRAVGGANHVNPISI VIPCHRVIGKNGNLTGYGGGLEVKEKLLELERKKV >gi|224531373|gb|GG658179.1| GENE 178 185796 - 186062 435 88 aa, chain + ## HITS:1 COG:no KEGG:CLD_0905 NR:ns ## KEGG: CLD_0905 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B1 # Pathway: not_defined # 3 84 2 83 83 93 60.0 3e-18 MKKRVAVISAILENAIEHQAEFNDVIAKFQKNIHGRMGIPFHQEGISVVSITMIGSMDEI NSFTGKLGSIDSVQVKTAISKKEIEEVC >gi|224531373|gb|GG658179.1| GENE 179 186056 - 187102 1560 348 aa, chain + ## HITS:1 COG:CAC1631 KEGG:ns NR:ns ## COG: CAC1631 COG0502 # Protein_GI_number: 15894909 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Clostridium acetobutylicum # 14 348 15 345 350 259 42.0 5e-69 MLVRQYIDELYERNDLEEEKLLYILDHIQKEEIGYLQKKALQTKEKYYGKKIYLRALIEF TNYCKRECRYCGINRYNTQVERYRLSEEEILKACQRAKELGFHTFVLQGGEDVYFRDEIL VDLVKKIKERFPEFALTLSVGERPYESYQKLKEVGVDRFLLRHETIIPEMYKKLHPQSEL QTRLDCLESLKSLGYQIGAGFMVGLPGYENKDYVKDLLFLKHLSPHMTGIGPFIPHHDTE LRNEKAGSVEKTIIILALVRLLLPKVLLPATTALGTVSEDGRLRGFASGANVVMPNVTPV EFRDKYALYNGKKNTGDEAAEGLRQTCEMIRKNNYEVDMGRGDSKVKY >gi|224531373|gb|GG658179.1| GENE 180 187146 - 188543 1798 465 aa, chain + ## HITS:1 COG:CAC1356 KEGG:ns NR:ns ## COG: CAC1356 COG1060 # Protein_GI_number: 15894635 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Clostridium acetobutylicum # 10 463 13 470 472 447 51.0 1e-125 MERNQEHMKVNREEIFRLLEEGKKVTREQILDILERAKRKEKITHLDIARLLYIEDQDLI QEMFEVAGKIKRDVYGNRVVLFAPLYVSDFCVNNCVYCGYKRENQFHRRKLTMDEVRKEV MILEEMGHKRLALEAGEDPVNCDIEYILECIDTIYDTYNKNGKIRRINVNIAATTVENYR RLKEKGIGTYILFQETFDEEVYRRVHPNCIKGNYEYHTTAFDRAMEAGIEDVGAGVLFGL ADPRFEVLALMMQNEHLEKRFGVGFHTISVPRLRPAERVNLETFPHLLDDEMFKKIVTII RIAVPYTGMILSTRESAEMRELLLKYGISQVSAGSCTGVGGYEEHIKGKQVSQFKLADER SPRQVIEDLMKAGYIPSYCTSCYRTGRVGEKFMEIAKTEKIHNMCKPNALTTLLEYAVDY GDEELLQKVETFVREQASEIENTHIRNFVLKNIDKLKAGERDLYL >gi|224531373|gb|GG658179.1| GENE 181 188540 - 189742 1534 400 aa, chain + ## HITS:1 COG:CAC1651 KEGG:ns NR:ns ## COG: CAC1651 COG1160 # Protein_GI_number: 15894928 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 2 396 4 396 411 298 43.0 2e-80 MMQETANANRKHVAFFGKRNAGKSSLFNLLLGEDYSLVSSHLGTTTDPVYKAMELVGYGP IRLIDTAGLDDIGELGELRVKKSKEVLRKIDMAIYVLDASQEITVEEREEAKKLFQRFHI PYVFVWNKRDMIGEILEAEWKSKYPNDVYLQINPIEKKRQLVDCIVKQLELEEEDPSLIG DLVHYGDSVILVVPIDSEAPKGRLILPQVQILRDCLDHGIKSYVVRDTELEKALEDLKDV KLVITDSQIFHRIADMVPLEIPLISFSILFARQKGELQEFLEGIQVLESLKEKEKAKVLI VESCSHTQSHEDIGTVKIPNLLRKKLNSKIEIVFQQGRNLEEDLRGIDLIIHCGSCMLTR KQMLNRIQIAKEQAIPITNYGIVLAYFSGVLERSIKILKK >gi|224531373|gb|GG658179.1| GENE 182 189753 - 190505 954 250 aa, chain + ## HITS:1 COG:FN0047 KEGG:ns NR:ns ## COG: FN0047 COG0708 # Protein_GI_number: 19703399 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Fusobacterium nucleatum # 1 250 1 250 253 407 77.0 1e-113 MKLISWNVNGIRACLKKGFMEYFEAQDADIFCLQETKCSAGQVELDLKGYHQYWNYAVKK GYSGTAIFTKKEPISVSYGLGIEEHDQEGRVITLEFEDFYMVTVYTPNSKNELERLDYRM VWEDEFRSYLAKLNEAKPVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERSKFTELLKA GFTDSFRYLYPDRLHAYSWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEIHAEQEGS DHCPVALYLK >gi|224531373|gb|GG658179.1| GENE 183 190519 - 191334 1082 271 aa, chain + ## HITS:1 COG:FN1263 KEGG:ns NR:ns ## COG: FN1263 COG4822 # Protein_GI_number: 19704598 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiK, Co2+ chelatase # Organism: Fusobacterium nucleatum # 1 271 11 279 283 232 45.0 7e-61 MKKQAILLIHFGTTHDDTREKTIDAFRKKVELSFADCDVFEAFTSRMIIKRLKARGIVKQ NPLELLQELKEQGYTHIYVQTSHILHGIEYENLKEELASYKKEFEEIKMGEPLLSSVEDY KQVVSALGKRQKTVENQVVVYIGHGTEHAANASYSMMRYVFFQEGYSPFFMGTVEGYPEF PEVLKEIQAQYPLEKPKVILKPFMFVAGEHAKNDIAVDWKKAFEEAGFVVSDVVLEGLGE IPEIQDIFMKHLQEAIENKRESIAEYKKKLS >gi|224531373|gb|GG658179.1| GENE 184 191362 - 194628 3526 1088 aa, chain + ## HITS:1 COG:STM4526 KEGG:ns NR:ns ## COG: STM4526 COG4096 # Protein_GI_number: 16767770 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Salmonella typhimurium LT2 # 2 1085 3 1164 1169 621 33.0 1e-177 MQTNFEFLKKDWELLAKIGEMAEYTLYKDPNTSIMKIRQFGEELVKIMFKVEHISDSQKN MASDRLLALKKYELIPEDIEKILTTLRKKGNKAVHGIYGDEETAETLLSMAVKVAAWFQE VYGSDLSFTSEEIIYQKPKNIDYQEAYESLVKRSEEMNQQLEEWIPKTPSLRSREERRQL IYQKKRIEFTEAETREIIDHQLKEAGWEVNTHSFNYKLHKTLPQKGKNMAIAEWPCKKED GKQGYADYALFCGEVLYGILEAKRMGTDIAGALQRDSRMYAKGFQKMEGVSLCEGAPFGE YKAPFLFSSNGRAYNKDLPEKSGIWFLDSRREENLPKTLRGFYSPRDLQELFRKEEEKAN ETLKQESIDYLLSKNGLGLRYYQVEAIQAVEEALISEKEKALLTMATGTGKTMTALGLIY RLLKTKKYKRILFVVDRSALGIQAGETFKNVKIEQQMTLKQIYDIKELSDKHSEDDTKVH VATVQGLIKRILYNTEEEKKPSVGQYDCIIVDEAHRGYILDKDMSEEESYFHDEKDFQSK YRAVLEYFVADKIALTATPAAHTYHIFGEPVYEYSYSQAVLDGYLVDAEPHYKIVTKLSS DGIHYAKGAEIKLFDEETQEVEVKEVLEDELNFDIEQFNTNVITENFNRAVCSTLVEEIS PEGPEKTLFYAVTDEHADMLVRILREEYEKQGLYSMNHNMIEKITGSVKDVGKLIKKYKN ENYPTIAVTVDLLTTGVDIPKISNLVFLRKVKSRILYHQMLGRATRRCDEIGKECYRVFD AAENYQDLKDFSDMKPVVVNPSLSINDILEQWFEVEEEEVRDWAVQQVIAKLQRKKKRIE DLGEEIFQRNAQNFRGESMNNIESYIQYLKEIPQEKQREVFQKEEAFLVYLDTIPAKKKR KVISEHEDEVLEMYQEFGDWKRPEDYLEGFRKYIQENQEKIQALKILKESPKGFRKKDLK ELIMILGAEGYKDSSLNSAYRSVKNEDIAADILTYVKNVIKGSPIVGKEQKIEDVMGRIK KLNKWNRVQRDILEKIAQSLRNDNYLTEEDFNSGRLKESYGGYERLNNRLNGLLEEIVEI INEEIILN >gi|224531373|gb|GG658179.1| GENE 185 194641 - 196068 1591 475 aa, chain + ## HITS:1 COG:hsdM KEGG:ns NR:ns ## COG: hsdM COG0286 # Protein_GI_number: 16132170 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Escherichia coli K12 # 1 469 1 507 529 391 43.0 1e-108 MTNNEIVQKLWNLCNVLRDDGITYHEYVTELTYMLFLKMACELGTEEEIQIPEAYRWKTL VAYEGIALKNHYQQALLDLGKELGQLGIIYRNAQTRIEEPANLKKLFSEIDKIDWYSVDK EDLGDLYEGLLEKNASEKKSGAGQYFTPRVLIDAIVRMIKPELGETIYDPAAGTLGFIIE ADKYLRNISQDYYGTAENPISEELSQKYKKVFSACELVQDTHRLGSMNALLHGIGGNFLQ GDTLSEFGKQFSHFDIILSNPPFGTKKGGERATRDDLVYATSNKQLNFLEVIYRSLNVTG KARAAVVVPDNVLFEGGVGKEIRQDLLNKCDVHTILRLPTGIFYSQGVKTNVLFFTRGTS DTNNTKEIWYYDLRTNMPSFGKTNPLSKEHFEEFERSFEKREEKETLERWTLVSMEEIMK KDYSLDLGLIQDESVIDSENLPNPIVTAKASIDKLEEAVDLLKSVIHELTLCEQE >gi|224531373|gb|GG658179.1| GENE 186 196080 - 197567 1431 495 aa, chain + ## HITS:1 COG:MA2120 KEGG:ns NR:ns ## COG: MA2120 COG0732 # Protein_GI_number: 20090963 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Methanosarcina acetivorans str.C2A # 26 490 17 480 487 114 27.0 4e-25 MAKKKELTIEEKLQAALVSKEEQPYEIPDSWVWVRLGSICEINMGQSPLGKNVNFEKGIG LIGGPSDMGEQYPDIKRYTIQATKLSTLDDIIVSIRATLGKAIFSDGKYCLGRGVCAIKS KSINPVLLKYYFMYITDYLYQIATGTTFAQISKEDVYNLKFAFSSLSAQQRIVKKLDFLF EKTKKAKKLLQEVKEEIEMRKISILNKAFRGELTKNWREENKTGSVLDLLQEIQNEKMKK WEEECREAEKNGSKKPKKIKLSKIEEMIVPKEEEPYKIPDTWKWVRLREVTENNQYGYTS KSTLEGKIKYLRITDIQNENVDWDTVPYIVEENNNISQFFLRKNDIVIARTGSTTGKSYR IDKIEDVAVFASYLIRIRVIKINSEYLLRFTHSNVYWNQIIELSSGIAQPGVNAQKLENL YFPLPPLEEQQEIVRVLEEVLEKEKKVKELIDLEEQIELLEKSILDKAFRGKLGTQDIND EPALELLKKIIDKEE >gi|224531373|gb|GG658179.1| GENE 187 197570 - 197833 334 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452210|ref|ZP_05617509.1| ## NR: gi|257452210|ref|ZP_05617509.1| hypothetical protein F3_04030 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_00915 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 87 1 87 87 119 100.0 6e-26 MKMEEFIPYFDKKVVVYFTDGTSRYGILSGTESEENEEGEYTGRELLVLDISEHSYMSFL PEEIKKMDIIEKKSLNKYYRKIKYLFS >gi|224531373|gb|GG658179.1| GENE 188 197847 - 198215 525 122 aa, chain + ## HITS:1 COG:no KEGG:Clocel_4011 NR:ns ## KEGG: Clocel_4011 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulovorans # Pathway: not_defined # 1 122 1 121 121 94 47.0 2e-18 MVTFKLIFNDGKIAIYWYFPEGKEENGHGVIIVNQVEHTIKIETLAPDDFQREEPAENLN RLRDEINAMMLENGEPPLTEEELPTATEPMIITFFADHVIKNIREEIKETGTLPKTGMSA WY >gi|224531373|gb|GG658179.1| GENE 189 198241 - 199149 1070 302 aa, chain + ## HITS:1 COG:BMEII0447_2 KEGG:ns NR:ns ## COG: BMEII0447_2 COG3586 # Protein_GI_number: 17988792 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 113 300 1 193 195 128 37.0 1e-29 MSDINVFEIKPKVKELKGSSVVLEKEIQNLIEQNMEEFFGIRFLATEYSITNGRMDSIGI DENNCPVIFEYKRSSSENIINQGLFYLDWLLDHKADFQLLVMNVLGKEAAKEIDWSAPCV FCIAKEFTKFDEHAVNQMQRNIKLVKYNKYGENLMLFEHINVPVLKKDTVSKGKKVKQEK KLSEKDNYNWESRIQKLPKEKQELYFSIRDYILSKGDDISENSLKNYIAFKRVKNFVCML PYKNKISLYLKLNPIEEVLIEDFVRDVKNIGHWGTGDLEIIIQSKEDYEKAKPYLDRAYE KN >gi|224531373|gb|GG658179.1| GENE 190 199342 - 199443 75 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKIPNKEVYSFFQESFIQKFLGNITNFAEKHLK >gi|224531373|gb|GG658179.1| GENE 191 199513 - 200775 2009 420 aa, chain - ## HITS:1 COG:FN0488 KEGG:ns NR:ns ## COG: FN0488 COG0334 # Protein_GI_number: 19703823 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Fusobacterium nucleatum # 1 420 15 439 439 712 86.0 0 MNKETLNPLLSAQAQVKKACDALGADPAVFELLKEPQRIIEISIPVKMDDGSIKTFKGYR SAHNDAVGPFKGGIRFHQNVNADEVKALSIWMSIKCQVTGIPYGGGKGGITVDPSELSQR ELEQLSRGWVRGMYKYLGEKVDVPAPDVNTNGQIMAWMQDEYNKLTGEQTIGVFTGKPLT YGGSQGRNEATGFGVAVTMREACKALGGDLAKSTVAVQGFGNVGRFTVKNIMKLGGKVVA VAEFEKERGAFAVYKEAGFTFDELLAAKEAGSITKVAGAKVITMEEFWALNVDAIAPCAL ENAITAKEAELITAKLICEGANGPITPEADEILYKKGITVTPDILTNAGGVTVSYFEWVQ NLYGYYWTEKEVEEKEERAMVDAFNPIWALKQEKNVSFRQATYMKSIKRIAEAMKVRGWY >gi|224531373|gb|GG658179.1| GENE 192 201238 - 202233 1476 331 aa, chain + ## HITS:1 COG:FN0487 KEGG:ns NR:ns ## COG: FN0487 COG1052 # Protein_GI_number: 19703822 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Fusobacterium nucleatum # 1 331 1 337 338 470 68.0 1e-132 MKVIFYGVRDVEKPIFEAVNKKFGYDMTLIPEYLTDEATTRKAEGNDVVVLRGNCFATKE RLDIYKEMGVKYVMTRTVGTNHIDVPYAKSLGMKTAYVPFYSPNAIAELALSLAMSILRN VTYTGNKTKDKNFIVDKQMFSREVRNCTVGVVGLGRIGMTAAKLFKGLGAKVVGYDLFPK TGVDDIVTQVSMDELLAQSDIITLHAPYIKENGKVITKEAFAKMKDNVILINTGRGELVD TDALVEALESGKVYGAGIDTLDNEVSLFFKDFAGKELPTPAFEKLVAMYPKVIITPHVGS YTDEAALNMIETSFDNIKEYLETGACKNEIK >gi|224531373|gb|GG658179.1| GENE 193 202261 - 203442 1500 393 aa, chain + ## HITS:1 COG:FN0793 KEGG:ns NR:ns ## COG: FN0793 COG0786 # Protein_GI_number: 19704128 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Fusobacterium nucleatum # 3 392 4 395 399 448 64.0 1e-126 MAFTLDMYQTLGLAIILLLLGNWIKSKVGVFQKYFIPAPVIGGFLFSILLLIGHSTGAFD FEFDSNLKNFFMVVFFTSVGFLASFSLLKKGGVGVALFLFTAIILVIIQNGVGVALAKAF GLNPGIGLAAGSIPLTGGHGTSGAFGPYLEERGVVGATVVAIASATYGLVSGCVIGGPIA KKLMEKFHLACVKDCEMKNTKAEEALVTEKSIFKAVCMIGIAMGLGACITPVIKEAGLSL PAYLIPMLIAAIMRNIVDGTANKTPINEISIVGNVCLSLFLSMALMSMKLWQLADLALPL ITILLIQTVIMGLFAYYVTFNIMGRDYDAAVMATGHCGFGMGATPNAIANMEAFTSVNGF STKAFFVIPLVGSLFIDFFNAVIIQTFTSIFVG >gi|224531373|gb|GG658179.1| GENE 194 203529 - 205037 1290 502 aa, chain + ## HITS:1 COG:FN2100 KEGG:ns NR:ns ## COG: FN2100 COG1404 # Protein_GI_number: 19705390 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Fusobacterium nucleatum # 84 446 4 383 416 211 35.0 2e-54 MTEYKKHYKIKLKKQNTKKEKDLQEERWEKFLKEKNISYEKKEFFPGYEIYKVGELSETL EKEIQENPEIDFIKPLHRYFLNFQTKQIETEKGTILKPKQGEKYPIVGVLDNGIAPLEEF ENWLYQDETSYCKEEIYPSHGTFVAGVILYGDILSQEHWCGGREVQIFNAAVVPDFSVYQ LEEDELYERIYKVISEHSWIKVWNLAISIRFPVEKDRISDFGLLLDYLQEKYDILICKSC GNGNFVENGKEAGMILQGSDTERALVVAACNRDKVVSSFSLSGKGHKILQKPDIAMYGGD VFRNEEGKRKIEGVFSFSPEGEIVSSFGTSFATARMTRIAANILFWKENSSSLFLKAMMV HAARGYEKYSLGYGCSLSSEEIYQEYQNSILEEGSLVEEESFLFYFSNHKIVATLTSDVV LDYHQEEEYILEDISWRIFYQGREITGENQLGNFEYFSSLKKLECEMKEENGEVKIVLFR RKKRKKTQENKEKLQYCLLWKK >gi|224531373|gb|GG658179.1| GENE 195 205211 - 207196 2341 661 aa, chain + ## HITS:1 COG:FN0198 KEGG:ns NR:ns ## COG: FN0198 COG3711 # Protein_GI_number: 19703543 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Fusobacterium nucleatum # 10 527 1 522 660 290 37.0 9e-78 MALNTKHFEILKELKKEDDLKRVANIFNQTERNIRYKIQELNENLGQEKIFIKKRKIYCL LDEQDISSLIKGLNVQNYVYEQKERMDLLIIKTILREDEFQIEEIADSLQMSKSTLRADI KILAEKLRKVGIHLEQYSNKKYRAQYKNNDLIYYLSIFLYNYVTFDEGRKAISFKRSNYF EKIVYEILTKMYFSVLEDSYQKIKSIDLPYTDETLNLLILLISVLKLRKLNSEDLEVLNK KVLKETKEFKVLRKTFPELSELNIYFLTDYLLRISCDEKEIFARHRNWIEIELGVYRLIK EFEHLKKVQLVKNKKLLDDILYYIKPLIYRSSKQIELKNTVLKEVKSIYGDTFYYLKKAF QSFETLLGLEVSDNEIGFLVPIFQVALRNRVRKAKKILVVSSYKRNLINFLLARLEEEFL VEIVNVISMKQLDNFQEEVDLIITTSDLSQMNLKLPFCRVSPILTESDRNHLEEFELPPQ DKNISLDTLMNVIERNLEGQKWSHLKLKEDLLQSFPNIIVDEKSQERKESLVIQKYQMKE LDVFDWKEAVKAAAEILWKHKYVKKAYMEDICNHLEEEALMFLLNENSALFYTEPKENVY HTGFSIVHVETPLLLKDKKIEYFVCFAPKGDAEDQNLLFQLNDFFEEENFENTLKSILRK K >gi|224531373|gb|GG658179.1| GENE 196 207216 - 207521 482 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452201|ref|ZP_05617500.1| ## NR: gi|257452201|ref|ZP_05617500.1| hypothetical protein F3_03985 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_00960 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 101 1 101 101 149 100.0 9e-35 MITTEYIGFLESLFTSILGMAIVFMSLVFLAIFVMIVSKVIGSLEKTLLDKKSEAKVLTK PVEVPKKDNKEALKIAVITAAISEERREPVDRFVITNIQKI >gi|224531373|gb|GG658179.1| GENE 197 207563 - 207979 738 138 aa, chain + ## HITS:1 COG:FN0200 KEGG:ns NR:ns ## COG: FN0200 COG0511 # Protein_GI_number: 19703545 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Fusobacterium nucleatum # 1 138 1 134 134 99 52.0 2e-21 MKYVVTVNGEKFEVEVERADGRSAGLSRRPMERGERAAAPVQKAAPVVEAPKATPAAAPA PAATSSGTANAVVSPMPGVILDLKVKEGDMVTVGQAVVVLEAMKMENEIVSEFAGKVTSI KVKKGDNVDTDAVLVEIQ >gi|224531373|gb|GG658179.1| GENE 198 207997 - 209139 1783 380 aa, chain + ## HITS:1 COG:FN0201 KEGG:ns NR:ns ## COG: FN0201 COG1883 # Protein_GI_number: 19703546 # Func_class: C Energy production and conversion # Function: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit # Organism: Fusobacterium nucleatum # 1 378 1 371 375 451 76.0 1e-127 MEFIKILEIMMAKSGFVALTWQSLVMFVISFILIYLAIVKQFEPLLLLPIAFGVFLTNLP LADLMKEADPWYASGVLRIIYNGIKSNLFPCLIFMGIGAMTDFGPLIANPISLLLGAAAQ FGIYVTFMFANSLPFFSAKQAAAIAIIGGADGPTSIYLANNLAPELLAPIAVAAYSYMAL IPLIQPPIMKLLTTKKERAVKMKQLRKISKVEKIVFPIGTVLFTTLLLPSVAPLLGMLML GNIFKESGVVQRLSDTAQNALINIVTIMLGVTVGATANGELFLRLETIAIIFMGLFAFCM STVGGVLLGKVLYLVTGGKINPLIGSAGVSAVPMAARVSQTVGASENPTNFLLMHAMGPN VAGVIGSAVAAGYFMLIFGR >gi|224531373|gb|GG658179.1| GENE 199 209198 - 210163 1515 321 aa, chain + ## HITS:1 COG:FN0202 KEGG:ns NR:ns ## COG: FN0202 COG1788 # Protein_GI_number: 19703547 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Fusobacterium nucleatum # 1 321 1 321 321 518 76.0 1e-147 MSKVMSLYDAIKTYVKSGDSICIGGFTTNRKPYAAVYEILRQGLGDFTGYSGPAGGDWDM LIGEGRVRNFINCYIANSGYTNVCRRFRHEVEKVGKMNLEDYSQDVIMYMLHASSLGLPF LPVKLMQGSDLVNKWGISKEVREKDPKLPNDKLVEIENPLVPGEKVVAVPVPRLDVALIH VQKASINGTCSIEGDEFHDIDIAIAAKHCIVTCEELVTEEEIRKDPSKNSIPQFCVDAVV HAPFGAHPSQCYNYYDYDADFYKMYDKVTKTEEDFKAFLQEWVYDIKDNEEYINKVGASR LAKLRVVPGFGYAAKLVKEAK >gi|224531373|gb|GG658179.1| GENE 200 210165 - 210962 1168 265 aa, chain + ## HITS:1 COG:FN0203 KEGG:ns NR:ns ## COG: FN0203 COG2057 # Protein_GI_number: 19703548 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Fusobacterium nucleatum # 3 265 4 267 267 472 86.0 1e-133 MANYKNYTNKEMQAITIAKEITDGQIVIVGTGLPLIGASLAKRIFAPNCKLIVESGLMDC SPIEVPRSVGDCRLMAHCGVQWPNIRFIGFEANELLNGNDRMIAFIGGAQIDPYGNVNST CIGDYHHPKTRFTGSGGANAIATYSNTVIMMQHEKRRFIDQVDYVTSVGWGDGVGGREKL GLPGNRGPIAVVTDRGILRFDEKTKRMYLAGYYPTSSIEDIIENTGFEIDTSRAVLLEAP SEDVIKMIREEIDPGQAFIKVPVEE >gi|224531373|gb|GG658179.1| GENE 201 210984 - 212741 2593 585 aa, chain + ## HITS:1 COG:FN0204 KEGG:ns NR:ns ## COG: FN0204 COG4799 # Protein_GI_number: 19703549 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Fusobacterium nucleatum # 3 585 2 584 584 975 81.0 0 MGNYSMPNYFQNMEQIGKELTRIDEQNEQQIKEVEAKIASLVDELHAAGTSDEKIAEKGQ LTALQRIAELVDEGTWCPLNSLYNPEDFETATGIVKGLGRINGKWAMVVASDNKKIVGAW VPGQSDNLLRASDTAKCLGIPLVYILNCSGVKLDEQEKVYANRRGGGTPFYRNAELQQAG IPVIVGIYGTNPAGGGYHSISPTILIAHKDANMAVGGAGIVGGMNPKGFIDQEGAEQIIE ATAKAKGVDVPGTVSIHYDQTGFFREVYAEEIGVLDAIRYYMDCLPSYNLEFFRVDEPME PALDPNDLYSILPMNQKKVYNIYDIIGRLVDNSEFSEYKKGYGPEMVTGIAKVDGLLVGI VANFQGLLMKYPEYKENAIGIGGKLYRQGLVKMNEFVTLCSRDKLPIIWLQDTTGIDVGN DAEKAELLGLGQSLIYSIQNSKVPQMEVTLRKGTAAAHYVLGGPQGNDTNAFSLGTAATE INVMNGETAATAMYSRRLVKDKKAGKDLTPTIDKMNKLINEYKEKSTPEYCAKTGMVDEI VNLYDIRAYMIAFANSAYQNPKAICAFHQMLLPRAIKEFNTYVKK >gi|224531373|gb|GG658179.1| GENE 202 212763 - 214001 1556 412 aa, chain + ## HITS:1 COG:FN0205 KEGG:ns NR:ns ## COG: FN0205 COG0786 # Protein_GI_number: 19703550 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Fusobacterium nucleatum # 1 408 1 413 419 483 69.0 1e-136 MERIVLELGMFETLALAVLAIYFGEFLRKQFPVLKRYCLPAAVVGGTVFALISMLLYSTN ICELSFDFKAVNSLFYCIFFAASGAAASLSLLKKGGKLVIIFAILAAVLAAGQNALALFV GKLMNVNPLISMMTGSIPMTGGHGNAAAFAPIAVEAGASAAMEVAIASATFGLISGCILG GPLGNFIIKRHRLENPALDGKDDVENMEEGTKTSSAVFMDKASLVNAMFLMCIALGIGQI ATLLLKKVGVSFPIHVSCMLGGILIRLFYDQKKGNHDVLYEAIDTVGEYSLGLFVSMSII TMKLWQLADLGGPLFVLLISQVIFIVIFCYLLTFNLLGRDYDAAVMAVGHSGFGLGAVPV SMTTMQTVCRKYRYSKLAFFVVPVIGGFISNISNAIIITKFLNIAKAMVGIG >gi|224531373|gb|GG658179.1| GENE 203 214030 - 214824 1039 264 aa, chain + ## HITS:1 COG:FN0206 KEGG:ns NR:ns ## COG: FN0206 COG1924 # Protein_GI_number: 19703551 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Fusobacterium nucleatum # 4 258 5 259 265 431 89.0 1e-121 MSKFTMGVDVGSTASKCVILKDGKEIVAKAVISVGTGTSGPARAIKQALEEIGYHSIEQL DGAVATGYGRNSLEEVPAQMSELSCHAKGAYFLFPKVRTIIDIGGQDSKALKVGDNGMLE NFVMNDKCAAGTGRFLDVIAKVLEVDLNDLEKLDEQSKVDVAISSTCTVFAESEVISQLA RGTKIEDIVKGIHTAIASRVGSLAKRVGIKDQVVMTGGVALNQGMVRALEKNIGFKIHTS EYCQLNGAIGAALFAYQKCLQAEK >gi|224531373|gb|GG658179.1| GENE 204 214903 - 216228 1873 441 aa, chain + ## HITS:1 COG:FN0207 KEGG:ns NR:ns ## COG: FN0207 COG1775 # Protein_GI_number: 19703552 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Fusobacterium nucleatum # 1 441 1 441 442 874 94.0 0 MAGKVEKLPNKTPRPIEGHKPAAAVLRGVVDKVYAGAWEAKRRGELVGWSSSKFPIELAK AFDLNVVYPENHAASTAAKKDGLRLCQAAEDMGYDNDICGYARISLAYAAGEPTDSRRMP QPDFVLCCNNICNMMTKWYENIARIHNIPLIMVDIPFSNTVDTPEEKVDYLIGQFDYAIK QLEELTGKKFDEKKFEDACARANRTAAAWLKSCSYMSYKPSPLSGFDLFNHMADIVAARC DEEAAIGFELLAQEFEQSIAEGTSTWEYPEEHRILFEGIPCWPGLRHLYEPLKDNGVNVT AVVYAPAFGFRYNNIREMAAAYCKAPCSVCIETGVEWRETMAKQNGISGALVNYNRSCKP WSGAMPEIERRWKEDLGIPVVHFDGDQADERNFSTEQYKTRVQGLVEIMEERKQERLAKG EDVYTNFENTKETDWSKPTLK >gi|224531373|gb|GG658179.1| GENE 205 216240 - 217388 1530 382 aa, chain + ## HITS:1 COG:FN0208 KEGG:ns NR:ns ## COG: FN0208 COG1775 # Protein_GI_number: 19703553 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Fusobacterium nucleatum # 1 381 1 381 382 696 90.0 0 MEEIKELLEQFKYYANNPRKQLDKYLAEGKKAVGIFPYYAPEEIVYAAGVVPFGVWGGQG PIERAKEYFPTFYYSMALRCLEMALDGTLDGLSASMVTTLDDTLRPFSQNYKVSAGRKIP MIFLNHGQHRKEAFGKQYNARIFNKAKEELEKICDVTVTDENLKKAFVVYNENRAEKRKF IKLAASHPQTIKASDRCYVLKSSYFMLKDEHTAMLKKLNEKLAALPEEKWDGVRVVTSGV ITDNPGLLEVFDAYKVCVVADDVAHESRGLKVDIDLSIEDPMLALADQFARMDEDPILYD PDIWKRPKYVVDLAKENNADGCLLFMMNFNDTEEMEYPSLKQAFDAAKIPLIKMGYDQQM VDFGQVKTQLETFNEIVQLNRM >gi|224531373|gb|GG658179.1| GENE 206 217406 - 217996 820 196 aa, chain + ## HITS:1 COG:MA4289 KEGG:ns NR:ns ## COG: MA4289 COG3291 # Protein_GI_number: 20093078 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Methanosarcina acetivorans str.C2A # 32 167 536 672 1734 67 35.0 2e-11 MCQNVWENDDFIFKGDELKGMTAKGKDKVKTQGLTDMIIPATTPEGVAIKRIGDNAFYRR GLTSVVIPDTVESIGYDAFGVCKLTEVKLPSALVGIEGFAFYRNKLKKVIFGDKVKKIEP SAFALNELEEIDLPEGLELIDTSSFYKNSLSSVKIPASVKKINMYAFHKNNIAEVEVPAG AQLHVYAFEANTEIKK >gi|224531373|gb|GG658179.1| GENE 207 218075 - 219055 1305 326 aa, chain + ## HITS:1 COG:FN1921 KEGG:ns NR:ns ## COG: FN1921 COG0340 # Protein_GI_number: 19705226 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Fusobacterium nucleatum # 1 235 1 231 234 203 45.0 4e-52 MKIYPFEVLDSTNDYMKEHRETFQEFDVVMAKNQRAGKGRRGNIWISTEGMALFTFLVKK REQETDEKYMKLPLLAGLAVIRALKNRKELEYQFKWTNDIYLRNKKLAGILVERREDDFF IGIGMNVNNPIPLEIKNIAISLQEVYQETTEIESLIREIVLECEKLLEEYFSGQWEDILQ EINAMNYLKGKKIGLRAGNLFVQGIVQRIDENGELELLSQEGLQSFGIGEVVKERILIKL EKNLEIFAKAYILKEANYDVIAYTQETFEGIWKERLEKLQVKIERNSSLEEMTQKYQAKS LEEYPDIFPLEYYEEEKIKEISKIFA >gi|224531373|gb|GG658179.1| GENE 208 219091 - 220074 1202 327 aa, chain + ## HITS:1 COG:FN1000 KEGG:ns NR:ns ## COG: FN1000 COG0502 # Protein_GI_number: 19704335 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Fusobacterium nucleatum # 1 326 32 359 360 449 70.0 1e-126 MKEFIHQLKDRVLEGYLVTREDAAKLLSISIEKEEELKELLQAANEIREKFCGNFFNLCT ILNAKSGRCSENCRYCAQSAHFKTNADVYPLVSKEVALEAAKEVEVEGAHRFSLVTSGRG LQGKEEELDKLQEIYRYLKENTDLDLCASHGICSKEALQKLKDAGVKTYHHNLESSRRFY PTICTSHTFDDRVNTVKYAHEVGLQVCSGGIFGLGETEEDRIDMAFDLRELKVHSVPINI LTPIPGTPLENNKEIDPKELLKDIAIYRFILPKVSIRYAGGRVKLGEYAKLGLEGGVNSA LTGNFLTTTGNTIESDKKMIKELGYEY >gi|224531373|gb|GG658179.1| GENE 209 220064 - 220759 787 231 aa, chain + ## HITS:1 COG:FN1001 KEGG:ns NR:ns ## COG: FN1001 COG0132 # Protein_GI_number: 19704336 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Fusobacterium nucleatum # 1 222 1 218 219 229 50.0 3e-60 MNTKGYFVIGTDTDIGKTFCSTLLYHGIRDKNGMYYKPVQSGGILKEGKLYAPDVLSLCQ FEGMPYREDMVSYVLGPEVSPHLASEIEEKTLDLDKVRSHFQELCKKYDYLIVEGAGGLH VPLIRDKFYIYDLIREFNFPVILVSSAKVGSINHAVLTMESLEKLGIPLHGIIFNRVKNT EESRIYEQDNMNIILQKAPTKNHLVILEGKKEIPQEDLNLFLKGEANEETK >gi|224531373|gb|GG658179.1| GENE 210 220743 - 222086 1744 447 aa, chain + ## HITS:1 COG:FN1002 KEGG:ns NR:ns ## COG: FN1002 COG0161 # Protein_GI_number: 19704337 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Fusobacterium nucleatum # 5 443 12 451 452 727 77.0 0 MKKRSELQEKDLQYIFHPCAQMKDFEENPPLVIQKGEGLYLIDEEGKRYMDCISSWWVNL FGHANRRINQVVMEQINNLEHVIFASFSHKPAIDLAEALVEVLPKGINKFLFADNGSSCI EMALKLSFQYHLQTGNPQKTKFISLENAYHGETIGALGVGDVDIFTQTYRPLIKEGRKVR VPYLDSRKSEEEFQKYEEECIQELRELIESSHHEIACMIVEPMVQGAAGMLMYSANYLRQ VRELTKKYNIHLIDDEIAMGFGRTGKMFACEHAGITPDIMCLAKGLSSGYYPIALVCITT DIFNAFYADYKEGKSFLHSHTYSGNPLGCRIAVEVLKIFKEENILAMVQEKGAYLQAKME KLFEGKDYVKSYRRIGMIGAIEIHEIPGQERVGRKIAALALEKGVLIRPIGNIVYFMPPY IITKEEINTMLQVCKESIEEYLKATKN >gi|224531373|gb|GG658179.1| GENE 211 222098 - 222913 1255 271 aa, chain + ## HITS:1 COG:no KEGG:ELI_2339 NR:ns ## KEGG: ELI_2339 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 271 1 275 275 366 63.0 1e-100 MKVKKVWAAYFSATGTTEKVVRGLAKSLAKKMQVEFDCFDFTLPDVRKCETPFQEGDVVV FGTPTIAGRVPNVLLKYLATIEGRGALAIPISLYGNRNYDDCLIELRDILAKANFYPIAA GAFIGEHSFSRILGAGRPDEKDMAIVEEFAEKIVNKIATGDKTLIEVKGTPEPYRWYYQP RDRQGNPVDIRKVKPLTNDKCTDCKICAKVCPMGSISFENVREIPGICIKCCACIKKCPE NAKYYEDAGYLYHQHELEEGYTRRAEPEYFV >gi|224531373|gb|GG658179.1| GENE 212 223114 - 225651 3232 845 aa, chain + ## HITS:1 COG:FN1022 KEGG:ns NR:ns ## COG: FN1022 COG0474 # Protein_GI_number: 19704357 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 6 845 21 862 862 1027 64.0 0 MASVKGLTTEQVKKLQEQYGKNALIEEEKESIFLVFLKQFKDALVMILIAASIVSAVSGN IESTFVIILVLIVNAVIGTVQHVKAQKSMDSLRKLSAPKSKVMRDGNKVEIDAFDLVPGD LVFVEAGDIIPADAKIIESYSLLVNENSLTGESNSVEKSPSAEDMSDLPLGDRTNVVYSG SLVNYGRAVIQITKIGMETEIGNIAKLLGETKEKMTPLQKALDSFGKNLTIVILVLCALI FGIYVYHGNSIMESLLFAIALAVAAIPEGLNPIITIVLSLETQKLAKQNAIVKELKSVES LGSISIICSDKTGTLTQNKMTVKKLYLDAKVLQETALQAENTTHKMMLEECIFCSDATET VGDPTETALVVLAANYGHDVQALKEEHPRLSEIPFDSDRKLMSAVYTKEDKYIMYTKGAL DSLLPRLVKIDIDGEVRDITEADIERIKLVNEKFAEDGMRVLSFGYRYMKSKDITLFDEE KYVFLGLVGMIDPPREESIQAVAECRRAGIKPIMITGDHKITARTIARQIGIFEEGDLVL EGVDVEKLSQEELIEMVPKVSVYARVSPEHKIRIVSAWQSLGKICAMTGDGVNDAPALKR ADIGIAMGITGTEVSKNAASLILADDNFSTIVKAITIGRNIYRNIKNSIGFLLSGNMAAI LAVVYASFANLPVIFSAVQLLFINLLTDSLPAIAVGVEPGNEDVLDEKPRDPKEGILTRD FLQRISLEGILITIFIVIAFHIGLAGGNALKGSTMAFSVLCLARLFHGFNYRGKRNVFAI GLLKNKMAIAAFFIGFVLLNGVLFTPALYKTFGIAALNLEQYLMIYVLAFFPTVILQIVK WIKYR >gi|224531373|gb|GG658179.1| GENE 213 225782 - 226243 667 153 aa, chain + ## HITS:1 COG:no KEGG:Smon_1033 NR:ns ## KEGG: Smon_1033 # Name: not_defined # Def: hypothetical protein # Organism: S.moniliformis # Pathway: not_defined # 2 153 3 148 148 130 47.0 1e-29 MKTILLGMLLLGSVAYAKVEDVLGTWITEKADTGNQIIVEIYQAQNGKYNGRVLELTMPI YTEGEYQGKERMDLQNPNPQLKHRKLVGIDFVSNFDYNEGKDKFENGNIYSPINGKTYHS YMQLQKDGRLLVKGSIDKSGLIGKKQYWTRYKK >gi|224531373|gb|GG658179.1| GENE 214 226336 - 227850 2098 504 aa, chain + ## HITS:1 COG:FN0998 KEGG:ns NR:ns ## COG: FN0998 COG0747 # Protein_GI_number: 19704333 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 502 1 499 500 615 61.0 1e-176 MKKVFTLLLGLLAVLFVACGEKQSNTEGQEKVVVVSQGAKPKSLDPYMYNEIPGLAVTRQ FYDSLFKKEDDGSITPLLAESYEYKTPTELWITLRQGVKFHNGDILTVDDVLFSFQRMKE TPASAIMISDIEKVEAVDDKTFKIILKQSSAPLLFSLSHPLTSILNKKYVEEHQGNISTE PMGTGPYKFVSWGDGEKIEMAAFDDYFRGRAKVDKVIFREIIEDSSRLAALETGEIDIAY DMTAIDSGTIEAKDNLVLISEPTTAVEYICLNNQKSPFDNKLFRKALDYAIDRQSIVDSV YMGRAKITNSIVNPNVFGFYDGLNKFTFDPEKAKELIAESGIKNPKFTLSINEGSDRQQA AQIIQANLRDVGIDMQIQILEWGTYLQSTAEGKFEAFLGGWMSGTSDADIVLFPLLDTKS FGSAGNRARYSNPAFDKLVEDARSELDVEKRKELYKEAQLILQEDTPMTIMYAKNKNIGV NKRIKGFIYDPTNVHSLYTLEIAE >gi|224531373|gb|GG658179.1| GENE 215 227863 - 228891 1523 342 aa, chain + ## HITS:1 COG:FN0999 KEGG:ns NR:ns ## COG: FN0999 COG1363 # Protein_GI_number: 19704334 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Fusobacterium nucleatum # 1 342 4 347 347 508 72.0 1e-144 MNVDINYILDLTEELLSIPSPVGYTHLGIARIAEELDKFGIRYEYTKKGAILAFVEGENR EYRKMISAHIDTLGAVVRNVKANGRLELTNTGGYAWGSVEGENVLVHTLSGKVYEGTLLP VKASVHTYGDVARELPRIEENMEVRIDEDVKTAEDILKLGILQGDFVSYETRTRRLANGY IKSRYLDDKLCIAQVFGYLKYLADTASKPKSDLYIYFSNFEEIGHGVSLFPEDLDEFISI DIGLAAADAHGDEKKVNIIAKDSRSPYDFVLRKKLVEAAEAADIPYTVSVNYRYGSDATT AILQGFDFKYACIGPSVDASHHYERTHNDGIIATVDLMIAYL >gi|224531373|gb|GG658179.1| GENE 216 229038 - 229568 328 176 aa, chain + ## HITS:1 COG:FN1198 KEGG:ns NR:ns ## COG: FN1198 COG1106 # Protein_GI_number: 19704533 # Func_class: R General function prediction only # Function: Predicted ATPases # Organism: Fusobacterium nucleatum # 1 156 1 156 420 212 74.0 3e-55 MLLQFYFSNYRSFEGEAILDMRASGSNELSSHIRVQGNEKILPVSAIYGANASGKSSVFE AFRFMTWCVSNSLSFSKENKGKSQKLNADSFKFSDKVKEPSEFEINYIDSNGKKKLYYTY GFKIGSSEIIEEYLAYNTKTGVKRNEEFTYIFNRKKMKNYIWIHLLKSLKKILKFL >gi|224531373|gb|GG658179.1| GENE 217 229580 - 230293 564 237 aa, chain + ## HITS:1 COG:FN1198 KEGG:ns NR:ns ## COG: FN1198 COG1106 # Protein_GI_number: 19704533 # Func_class: R General function prediction only # Function: Predicted ATPases # Organism: Fusobacterium nucleatum # 1 236 182 419 420 341 80.0 8e-94 MLVSLGAVLNIKEMKQVQDWFFKTEVINFSNSLYGAFFENILPRKADESQEVRRNLVEFI NSFDDSIIDIEVEKSSSGDKDEDSYRVYAIHKTKSGNTNRLSFSEESSGTKKMFSLYQTL LDVLEQGGIFFADELDIKLHPLLMRNILLTFTDKEKNKNNAQLIFTTHNTIYMDMDLLRR DEIWFVEKKLGVSSLYSLDDITNEKGEKVRKDSNYEKHYLLGNYGAVPYLKNLLGRY >gi|224531373|gb|GG658179.1| GENE 218 230296 - 230940 291 214 aa, chain + ## HITS:1 COG:no KEGG:FN1197 NR:ns ## KEGG: FN1197 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 212 1 211 213 272 75.0 6e-72 MKRENRLNRKREDRKKIPLKTGAYLIVTDAEKTEKNYFEGIKSTIPEILKNDLQIKIFSN KSLAKIIDFAAEERNKDERFRDVWLIFDRDEVKNFDTLIEEAKNSKMNVGWSNPCFEIWL MAYLKNLENISNSQFCCSRFEKIYTERTGKNSYEKAEEKIYNILLEFGEEEKAIEKARVK YHTSKEEYRIPSKMIGCTTVYKLVEELKSKINCV >gi|224531373|gb|GG658179.1| GENE 219 230988 - 231464 290 158 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466025|ref|ZP_05630336.1| ## NR: gi|257466025|ref|ZP_05630336.1| hypothetical protein FgonA2_01075 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 158 1 158 158 179 100.0 5e-44 MEKKYKKSFKDEIQKNYSLNQKKLRYELSDKIRKKYNKKQGLLESLSLKKAPFILLGSIF YSLVDNYYKNLFQYPNSRNEIILLFSDNLKLICIIFLLIFIVKYYWYILYEDFFKTNELN TLHELEELLYEISIETKFSKSSQKKFIKSVKDIEKNEL >gi|224531373|gb|GG658179.1| GENE 220 231874 - 234174 2954 766 aa, chain + ## HITS:1 COG:FN1499 KEGG:ns NR:ns ## COG: FN1499 COG5295 # Protein_GI_number: 19704831 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 328 754 67 475 479 138 30.0 5e-32 MVFERKGGEYMLEEKSVKNWLKRKVKFTQALLVAFLITGGVGYAVDNVPGKGAGVAIGTG SEAPKAENVAVGKNATVSYSNGDSKATGDIVVGNDANINNYASQGGSIAIGKNAKIENMT GRQESIFGFGQTEYKNGNFWGTLKIPVLPEKVIGSVAIGDNTFVRTGGTMIGSHNYRGKL GDIEVDTSNTRKQGLNVYATTIGANSFSSGAFATTTGAFSIISSDYDGGGYSSSATKNIG ASIYGSLNSIESSTSNSSYSGIANSIVGVANRTNNANGSLIFGAGNEITNSIKTITKPSN SEKASVKEFSDELRKVVRSSNSGGSTMAFGGGNKADWTQLTSMIGVNNIITGDKDNVAKY NMISGYKNTITKSSENIVSGTNYSVSGEGKNILMGFNKEENKVEKKNVVALGNDIKVNTD NSVYLGSGSTDAETKATKGMEEYSKATINGKEKNFAGGTPAGIVSVGSTGKERRIQNVAA GLISKDSTDAVNGSQLYAVAEELQNKVDAPITADKITEKGSIADSTDIKVTGTGTDRLVG TGNISFTIKDNAVTKKKLSTEVQNTLDRVGKGKIEEGDNNTVTGDTVYKYKVENDKKLNG KVEKDEFHNYQNTTNDRMNKMESETRHVGALSASLAALHPMQYDPLQKSQVMAGVGTYRD KQAIAVGVAHYFNENLMMTAGVSLGEDTRTKSMANLGLTWKIGSDDDRKDLPERYKEGPI GSIYMMQTEMEQVMNENKDLKKLTQTQQQEIEMMKQQIQMLMEKVK >gi|224531373|gb|GG658179.1| GENE 221 234508 - 235647 1218 379 aa, chain + ## HITS:1 COG:all7245 KEGG:ns NR:ns ## COG: all7245 COG0675 # Protein_GI_number: 17233261 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 5 379 3 374 407 276 42.0 6e-74 MKQLKAYKFRIYPSDEQKIFFGKTFGCVRLVYNLMLNDRMKAYEESKGNPDKKLKYPTPA KYKKEYEFLKEVDSLALANAQMNLEKAYKNFFRDKSVAFPRFKSKKNPVQSYTTNNQNGT VTIFENWLKLPKLKELVKIKVHRKIKGIVKSATISRNGSGKYFISLLCETDIQEMSKTNS AVGIDLGIKDMAIFSTGEKIENLKFRKQLENKLKREQRKLSKRFFVAKKENRKLSESKNY QKQRIKVAKIHEKIMNMRTDFLNKLSTYIIKNHDIICMEDLNTKGLLHNHKLAKTIADVS WANFVNKLEYKAKWYGKEIIKIDRLYPSSQICSVCGHRDGKKTLDVREWTCPICHAHHDR DINASKNILAEGLRMRQAV >gi|224531373|gb|GG658179.1| GENE 222 235939 - 236526 833 195 aa, chain + ## HITS:1 COG:FN0795 KEGG:ns NR:ns ## COG: FN0795 COG0517 # Protein_GI_number: 19704130 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Fusobacterium nucleatum # 1 195 1 193 198 189 51.0 2e-48 MELTERQEKILELIKENSPISGDEIAQNLGVTRSALRTDFSILRKMSFISAKQNHGYCFV GEGPKNKIGQIMSEPKQMDSKSSVYETIVYMFENDIGSVFITENKNVLVGVVSRKDLLKA ALGNKDLEKLPIHMVMTRMPNLIYVTEQDSIKTAVEKIMKHQIDSVAVVKKEKEVCYLVG RFSKTNISKLYLETL >gi|224531373|gb|GG658179.1| GENE 223 236547 - 239081 3479 844 aa, chain + ## HITS:1 COG:FN0796 KEGG:ns NR:ns ## COG: FN0796 COG0574 # Protein_GI_number: 19704131 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Fusobacterium nucleatum # 1 844 1 851 851 1187 70.0 0 MKQVYEFREGGKDLIPLLGGKGGNLAEMTKIGLAIPNGIIVTTDACREYFRNGKKISEEL RNEILEKLETIQKKPLLVSVRSGAPISMPGMMDTILNVGFNDAVAEEVLASIKDETFVYS SYARFISMFSEIVQGVEKKKFDKIAEETKNPKDLIPLYKALYEKETGEKFPEEVKEQILM AVNSIFNSWNNERAILYRKLNNIDDDMGTAVVVQEMVFGNYNDKSGTGVVFSRNPSTGEK QIFGEYLICAQGEDIVAGIRTPEPIAKLQEEMPKVYEELLENIHKLEQHNKDMQDIEFTI QDEKLYILQTRNGKRAPKAAVKIAIDMQEEGIISKEEAVLRVDPSLVNQLLNGDFEEKAV KEATLLGKGLAASSGVAVGRVMFDSKRVKIREKTILVREETSPEDLKGIALAQGILTVKG GATSHGAVVARGMGKCCITGCGAIKINEIDREMYIGGRTVKEGEFISISGYTGEIYLGKV AIKEASYDDDLKKILSWAYEIKRLQVRMNADTPEDVKMGKDFGAEGIGLCRTEHMFFQKD KIWAIRQVILGEEGEEKNKAIEKLFELQKEDFMGIFKNLNGDVANIRLLDPPVHEFLPKE KADKIIMAKNLGIHLYDLEIRIRKLKDENPMLGHRGCRLGVSYPRLYKAQGRAIIEAALD CRKEGHPVHPEIMIPFTMEAKELEYLRKEITEEIECLFEERQERLDYKLGTMIEIPRACL LANEIAEVADFFSFGTNDLTQMSMGLSRDDSVKFLDQYREKGIWEGEPFYSIDQKAVGKL VEYGTRLGREANKNLTVGICGEHGGDPKSIEFFERQGFDYISCSPFRVPSAILAAAQSYL KNRK >gi|224531373|gb|GG658179.1| GENE 224 239092 - 241023 2208 643 aa, chain + ## HITS:1 COG:FN0798 KEGG:ns NR:ns ## COG: FN0798 COG3855 # Protein_GI_number: 19704133 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 2 641 3 643 645 917 69.0 0 MSELKYLELLSQSFPNIAETSTEIINLQAILNLPKGTEHFLTDVHGEYEAFSHVLRNGSG SIRQKIEDIFQDTLTELEKKELATVIYYPDGKYDMALEEQPNMNKWIRTIIYRLLKVCKN VSSKYTRSKVRKAMPKDFEYIMQELLYESREEDNKRDYVESIIDTLISISYTKQFIVAMS ELIRRLTIDHLHLVGDIYDRGPAPHLIMDCLLDYHHVDIQWGNHDMLWIGAGVGNKACIA NVIRICCRYNNNDILEEAYGINLLPLATFAMKYYGKDPCKSFRPKEGIDSDLVAQMHKAI SIIQFKVEGLFSERNPNLQMKDREILKEINYERGTILWQGKEYPLNDTFFPTIDPKNPLE LLDEEAELLDRLKDSFMNSEKLQRHLRFLFSHGSLYLCCNSNLLYHACVPLTKDGKLAEV EIEGVKYKGKAYLDKIDNIARQAFFDRVGNEKDKRNRDFLWYLWCGELSPLFGKDVMRTF ERYFIDDKSTHEEHKNPYYTFINQEETCNMILSEFGLNPKISHIINGHVPVKVKKGESPV KANGKLFVIDGGFARAYQKTTGIAGYTLIYNSYGIKLVSHAPFESKEKALKEGADILSSI VVEDKIVQRKRVKDTDIGKKLQGQVNDLKKLLLAYRKGIIQVK >gi|224531373|gb|GG658179.1| GENE 225 241111 - 242541 1800 476 aa, chain + ## HITS:1 COG:FN1003 KEGG:ns NR:ns ## COG: FN1003 COG2067 # Protein_GI_number: 19704338 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Fusobacterium nucleatum # 240 476 42 273 273 218 50.0 2e-56 MNFKLKCMAVASLLSISAYGASIDHIQTYAPEYLGNQAQNGAINGVSPFYNPAGTTQLEE GLYVSGGLQIAAGHEQSEYKGKEYKAIFVQPVPNIAITKVNKGEATYFNFSAIAGGGTLN YKHGVVGTAIIPDLVANLKLKNIDVKKAGADLTKLGLKPEQAQQLLNSPVGVKVIDGTKA EGSNLYAQMTLGKAYQINDKLSLSGGIRLVHGIRDLKGTIKLKAYSPIETINPLLGKIPL EAEIDSKRRANGVGFVLGANYKANEKWNLGMRYDSRVKLNFKANTTEKEIAIPTVGGIKY IGFTSDLYYPQYKDGKKQRRDLPAILALGTTYQVTDKWMTGLSANYYFNKDAKMDGQKYN NGFEVAFGNEYKLNEKWTVLGSVNYAKTGALKDSYNDIEYALDSVMLGTGLKYQYSPTLE LTASVAHYFYKSEEGNIKGRVATKADPLMKKLQNVNEQQKYKKSITAFGLGFTKKF >gi|224531373|gb|GG658179.1| GENE 226 242572 - 243138 763 188 aa, chain + ## HITS:1 COG:FN1004 KEGG:ns NR:ns ## COG: FN1004 COG1309 # Protein_GI_number: 19704339 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 187 1 188 188 154 42.0 8e-38 MARKVVFDRERIIEKAFKMLKKEGMEAITARKLGDYMNASPAPIYNSFRSMEELKEVLVE KAKALFLDYIQNNRTELPFLNMGLGFCIFAKEESNLFRNIFLNPNIEGNIIEQFREISQQ EIIKDSRFDNISEDRRTEIFFDCWTYAQGLASFIALGQIAATEAELIDMLLRGPGYLIHK KLEEYGKQ >gi|224531373|gb|GG658179.1| GENE 227 243169 - 244317 979 382 aa, chain - ## HITS:1 COG:FN0831 KEGG:ns NR:ns ## COG: FN0831 COG1629 # Protein_GI_number: 19704166 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 5 382 321 698 698 553 76.0 1e-157 MATSDQTMYHHTYGFKNKLDIPYAKNTIFEGSSLLLGIDSYQQDASLEYNDYKVKNWKKK IYTTKPLSFHYKKRTNAFYLLNTLKYGNWESSQGIRRDYTYWNFDKIAAKNDGKDISHRH NTNYELSLAYKYRETGRVYARYERGFTSPDGLEITDDFSKGKIHPTQGEDEIYDLYEIGW REYLGFTTINLTAFYNKTDNEMSRNYILSDELGFGRKTINVLKTKRKGLELSLSQKFGKL SLKESYAYLKGKREYNGKEGKFLSPDDYIDWSNTGLKKVPKHSLTLEANYQFTPRISGEI RYKYNGKYSNFSSLDKKEEEGYIKSHSVTDLSLHYHHENGLHLYGGINNLFNEKYFEYAG SRIYTVIPAEERTFFLGAKYKF >gi|224531373|gb|GG658179.1| GENE 228 244476 - 245270 742 264 aa, chain - ## HITS:1 COG:FN0831 KEGG:ns NR:ns ## COG: FN0831 COG1629 # Protein_GI_number: 19704166 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 4 263 2 261 698 330 67.0 2e-90 MRRKKALFLSFLLCNLVAFGEKTIQLPESNIQSDYIEINKMKNTKHIIVIEKKDIQEKGY TNFSSILQDIPSIHVGTTAWGEIDIRGQGEGNAGKNIQVLVDGAPITTLVNHPIQTNYDV VPVENIERIEIIPGGGSIIYGSGTAGGVINITTNLSKLQKVDNHVEVSAGNGGEKYNVSF GYPITKKLNAQISYLRDNQNLYFKNTYRNSDYFTAGIFYQVAQNQSLSLRYSTLSEKGKF VRNINYKKLQEYGKNYKPDPKKLP >gi|224531373|gb|GG658179.1| GENE 229 245440 - 245844 478 134 aa, chain + ## HITS:1 COG:FN1881 KEGG:ns NR:ns ## COG: FN1881 COG0824 # Protein_GI_number: 19705186 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Fusobacterium nucleatum # 1 130 1 129 129 117 47.0 4e-27 MFQYTYQIQKEDINHGNHVGNERALVFFKKAREAWLAEKNYSELSIGEGCGIIQKSAGIE YRKQIFLQDTIDVNIIKIEVEKLFFTFFYQIYNQKGELCVEGNTKMLAYDYKNQKVRKIP NHFLKRIEEYGMES >gi|224531373|gb|GG658179.1| GENE 230 245907 - 247115 860 402 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 7 395 12 410 418 335 42 1e-90 MENVFHVLQERGYLKQFTHEEEIKALLEKEKVTFYIGFDPTADSLHVGHFIAMMFMAHMQ KYGHRPIALIGGGTGMIGDPSGRTDMRTMMTRETVQHNIDCIKKQMEKFIDFSDGKAILA NNADWLWDLNYIEFIRDIGSHFSVNRMLAAECFKSRMENGLSFLEFNYMLMQGYDFLVLN KKYGCVLELGGDDQWSNMIAGVELIRKKEQKSAFAMTCTLLTNKEGKKMGKTAKGALWLD PEKTSPYEFYQYWRNVDDADVEKCLSLLTFVPMEEVRRLVSFQDERINEAKKVLAFEITK MIHGEEEALKSQKAAEALFSGGADLTTVPKLEVSIGEELLNVLVENKVLKTKSEGRRLMQ QGAMTLENEKMSDPAYVITGDSFSGDALLKLGKKKFYQLVRK >gi|224531373|gb|GG658179.1| GENE 231 247126 - 247587 571 153 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_1758 NR:ns ## KEGG: Ilyop_1758 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: I.polytropus # Pathway: not_defined # 2 141 3 144 158 101 41.0 9e-21 MNIKLRKMEERDIPTIYQYIHKKYVKKYYEKEEEKQWQAHRNWYCFVLNSNSYFFYIIER EQEFIGTVRYELEEEKAIVSIYIREEYRNQGYAKLALLESISCLLKEVEVEGIFAHILQE NECSQQVFLHCGFQKYKKEVYWKEIKVREDRNG >gi|224531373|gb|GG658179.1| GENE 232 247580 - 248221 695 213 aa, chain + ## HITS:1 COG:FN0057 KEGG:ns NR:ns ## COG: FN0057 COG0177 # Protein_GI_number: 19703409 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Fusobacterium nucleatum # 14 205 1 192 201 323 79.0 2e-88 MDKKQRVREVLKRLEEKFGKPKCALDFKSPFELLVAVILSAQCTDVRVNIVTKQMFPHVN TPEQFAKMEVEEIEEWIRSTGFYHNKAKNIKKCSQQLLELYHGEVPQDMEQLVNLAGVGR KTANVVRGEIWGLADGITVDTHVRRLSNLIGFVKEEDPIRIERELMKIVPKKSWIDFSHY LILQGRDTCIARRPRCNQCEISEFCKGKKIIDK >gi|224531373|gb|GG658179.1| GENE 233 248282 - 249454 1887 390 aa, chain + ## HITS:1 COG:FN0058 KEGG:ns NR:ns ## COG: FN0058 COG1104 # Protein_GI_number: 19703410 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Fusobacterium nucleatum # 1 390 1 390 397 578 75.0 1e-165 MKVYLDNNATTKVDPAVFEAMVPYLTEYYGNSSSLHLFATETSQALNEARNTIARILKAK TSEIIFTASGSEADNLAIRGVAKAYKHRGKHIITSTIEHPAVKNTYLDLAEEGFEITMVP VDENGVLKLEELKKAIREDTILISVMHANNEVGAFQPVEEIAKIAKEHRILFHVDAVQTM GKLTIHPEEMGIDLLSFSGHKFHAPKGIAALYIRNGVRFGKVLTGGSQENKRRPGTSNVA FAVGMAKALDMAVSNMEEEWKREEGLRNYFEEELLKRIPEIVVNAKSVKRLPGTSSITFK YLEGESILLTLSSKGIAVSSGSACSSDSLQPSHVLLAMSIPAECAHGTIRFSLGKYNTKE EIDYTIEAVVETVTRLRSISPLWNAFQNNK >gi|224531373|gb|GG658179.1| GENE 234 249499 - 249876 680 125 aa, chain + ## HITS:1 COG:FN0059 KEGG:ns NR:ns ## COG: FN0059 COG0822 # Protein_GI_number: 19703411 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Fusobacterium nucleatum # 1 125 4 128 128 203 84.0 8e-53 MQYTEKVMNHFMNPHNVGVIENPDGYGKVGNPSCGDIMEIFLKIDNDIITDVKFRTFGCA SAIASSSVSTDLVLGKTVEEALQITNKKVVEALGGLPAVKMHCSVLAEEAIKLAIEDYMA KKENK >gi|224531373|gb|GG658179.1| GENE 235 249993 - 251138 1449 381 aa, chain + ## HITS:1 COG:FN0060 KEGG:ns NR:ns ## COG: FN0060 COG1686 # Protein_GI_number: 19703412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Fusobacterium nucleatum # 33 374 1 352 368 280 47.0 3e-75 MKKKWLVAGFLWGISLFLQAGEIREIQTIDQILQEETTPVVEIQKVEIKLPEVKATEKKI EEKKQEIVKETKEAIPKEKKIVQEKVQEVKEVKVPEKKKEKEKPVKVEKIIKEIKEVKEE KKQERDTVLSKEDTYLAGLVADTRGNIYYSKNIDKKLPMASVTKVMTLLVTFDAIRNGEA HFDDKVVITKDVYNKGGSGISMKPGEKFTLLDLIRATAIYSANNAAYAVAKHIGKGSIPN FIKKMNKKAREVGVSKEISYYSPAGLPTRYTKEPMDIGTARGIYKLSLEAIKYPEYMEIA GIKQMKIHNGRISIRNRNHLIGEEGIYGIKTGYHKEAKYNITVASKDGQREFIVVILGGN SYKDRDNAVLHLLDKVKRELR >gi|224531373|gb|GG658179.1| GENE 236 251155 - 251577 417 140 aa, chain + ## HITS:1 COG:no KEGG:FN0731 NR:ns ## KEGG: FN0731 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 131 1 128 177 72 36.0 8e-12 MKKLGILALMFSLSLCIFAGPFTVKDIPRDVEREIFDSFSGSGEDRRRNIEDAKEAYIRL QNKAYDSDIPKEDLEVIIVRLHQMYGTNFQKQSGEFDREVAQYKDMVRRVEEKVKAETQK LEMENQKAKKEIEVLSIITE >gi|224531373|gb|GG658179.1| GENE 237 251574 - 251693 79 39 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452168|ref|ZP_05617467.1| ## NR: gi|257452168|ref|ZP_05617467.1| hypothetical protein F3_03820 [Fusobacterium sp. 3_1_5R] conserved hypothetical protein [Fusobacterium sp. 3_1_5R] conserved hypothetical protein [Fusobacterium sp. 3_1_5R] # 1 39 141 179 179 69 100.0 9e-11 MTQALYQEILAKAEEKYPNNFVAQRYFIEGAIEFSKIKK >gi|224531373|gb|GG658179.1| GENE 238 251853 - 252962 1436 369 aa, chain + ## HITS:1 COG:FN1470 KEGG:ns NR:ns ## COG: FN1470 COG3055 # Protein_GI_number: 19704802 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 366 1 367 372 481 66.0 1e-135 MKKLFSILFLTCSCLSLAEHRISWEAVGELPAQKSYEKNIGTAGLLQGMIDDYVVVGGGA NFPIKPLTEGGAKVTHKDIYLLKENKKGLEVLEQMQLDTPIGYGASVSTGKEIYYLGGSP EAAHNKDVLKVSVENGKMKVEKVADLMLGFENGVATYQNGKIYYGVGKIENEEGKLKNSN RFFVLDLQTGENKELATFPGEARQQTVGQVLNGKFYVFSGGSSVSYIDGYAYDFEKNVWE KAADVVVDGERILLLGANSVKVSENEMIVIGGFNYYLWNEANDKLSNLKDKELADYKAQY FGKEPFRYEWNRKVLVFNAKENTWRSIGEVPFDAPCGAALLKHGKMMYSINGEIKPGVRT PRIFRGEFR >gi|224531373|gb|GG658179.1| GENE 239 252966 - 253973 1016 335 aa, chain + ## HITS:1 COG:FN1471 KEGG:ns NR:ns ## COG: FN1471 COG1609 # Protein_GI_number: 19704803 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Fusobacterium nucleatum # 1 333 1 333 333 261 41.0 1e-69 MMTQKKIAEMLGISRTTVARALQENSSIKEETRQRVLQLVRETQYEKNYLGSSLAGRKKI VHAFVVKSKNEFYTNEIQRGMQKIQKKYAKYRLEIRVHLHDINQPQEQVAMLENILSQQE QMDGLLIVPLEKNKIYSLLKPYLTKIPVISLTMQLHSDIPHVGTDYHRQGRIVANILSYC LREGESLVILDNGDDKLSTQDYLNGFLERISEEKLDILGPYRCHGIQESVDLLKDLSSKK KIRAVFSNRYAQNIIRELPDSWFLEKNIVVNGMSEGIQQLLLEKKVIATVTEEVYEEAAF AGKLLFQILYQNKKVQKMWSKTNSKIIYLENLEKK >gi|224531373|gb|GG658179.1| GENE 240 253987 - 254976 368 329 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 [Lentisphaera araneosa HTCC2155] # 15 308 38 329 346 146 31 2e-33 MNLKKLVAMGLVFGAMATAALAAEYELKMGMTAGTSSNEYKAAQFFAKKLKEKSKGEIEL KLYPDAQLGKNDLDMMGQLEGGVLDFTFAEMGRFSTFYPEAEVYTLPYMMKNFKHMQKAT FGTNFGKQLLKKIETKKNIIVLSQAYNGTRQTSSNKAINSIKDMKGLKLRVPNAPANLAF AKYSGAAPTPMAFSEVYLALQTNSVDAQENPLSAVKAQKFYEVQKYIAMTNHILNDQLYL VSAATMEDLPSNLQKVVKEAAVEAAKYHTQLFEKEEASLKDFFKTKGVKITEPKLDEFRA AMKPFYDQYTKKNGKLGQQALKEIQAAAK >gi|224531373|gb|GG658179.1| GENE 241 254994 - 256847 694 617 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 [Algoriphagus sp. PR1] # 192 613 5 428 431 271 35 2e-71 MKLFNKLEEWIGGTLFVGMFIILVLQIISRQILDDPLIWSEELARLFFVYVGMLGISMGI RTQSHVMIDFVYARLPEKLQKIIFTGIQMIIFLCISSFSYFGYLLIEKKADIELVSLGIS AKWMYIALPVISILMLIRFFQAYQENWENKKVLISPKIILAFMIIFMALLIFQPSVFKVF KLTQYFKLRGNSVYVALLLWLVLIFAGVPVGWSLLASSMVYFSMTKWAVAYFASSKFVDS VDSFSLLSVPFFILTGILMNGSGITERIFYFAKATLGHYTGGMGHVNVAASLIFSGMSGS AIADAGGLGQLEIKAMRDEGYDDDICGGITAASCIIGPLVPPSISMIIYGVIANQSIAKL FLAGFVPGVLTTIALMIMNYFVCKKRGYKKAKKCTSKERWEAFKRAFWALLTPIIIIGGI FSGMFTPTEAAVVAALYSVILGMFIYKELTLKALFQHCVEAMAISGVTVLMIITVTFFGD MIAREQVAMKIAEVFIQFASSPLTVLLMINLLLLFLGMFIDALALQFLVLPMLIPVAEQV GIDLVFFGVMTTLNMMIGILTPPMGMALFVVAQVGKMPVSTVTKGVLPFLIPIFVTLVVI TIFPQIIIFLPNLIMGA >gi|224531373|gb|GG658179.1| GENE 242 256851 - 257753 329 300 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 5 290 4 318 319 131 28 5e-29 MKQDKIIAVDIGGTNIKYALVSFRGEILSSGDIPTEASKGIEILLSKLDNIIQTFLTEEI LGIAISATGQIDYYQGKVVGGNPIIPGWIGCELVKILEEKYHLPCVLENDVNCAALGEAW LGAGKGQKDFLCLTIGTGIGGGIILNHDLYRGASAVAGEFGKLYLQNKEEVYEKYASMSA LVKKVETKTGEHWNGKKIFDVYWQGEKTIVSLVDEWIHDITEGLKVLLYLWNPSCIILGG AVTHQGEAFQKKIEEELQKQITPNYLECLEFKFANLGNHAGLLGAAFLLLDKTKQEEVKQ >gi|224531373|gb|GG658179.1| GENE 243 257750 - 258622 1283 290 aa, chain + ## HITS:1 COG:FN1475 KEGG:ns NR:ns ## COG: FN1475 COG0329 # Protein_GI_number: 19704807 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Fusobacterium nucleatum # 1 288 1 288 290 448 77.0 1e-126 MKGIFSALMVPYNLDGSINEKGLRELVRHNIDVMKVDGLYVGGSTGENFMISTEEKKEVF RIAMDEAKNEVQMMAQVGSINVKESVELGKYATELGYPCLSAVTPFYYKFSFAEIKEYYE TIVRETQNNMVIYSIPFLTGVNMDIAQFGELFANPKIIGVKFTAGDFYLLERMRKAYPDK LILSGFDEMLLPAVVMGVDGAIGSTYNVNGIRAKEIFRLGKEGKIAEALEIQHVTNDLIE GILQNGLYPTIKEILKCQGVDAGICRRPMAPTTEEQAKVAKELYQKYLAK >gi|224531373|gb|GG658179.1| GENE 244 258632 - 259309 1083 225 aa, chain + ## HITS:1 COG:FN1476 KEGG:ns NR:ns ## COG: FN1476 COG3010 # Protein_GI_number: 19704808 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Fusobacterium nucleatum # 1 224 1 224 224 275 72.0 4e-74 MKERIEALRGKLIVSCQALQEEPLHSSYIMSRMAYAAYVGGASGIRANTVVDIHEIKKTV DLPIIGIIKEVYGDNPVYITPTMKEISALVTEGVDIIAIDGTKRERPDGNTLEALMKEAK EKYPKQLFMADISSVEEAVEAERLGFDFVGTTLVGYTEYTKGNLPLVELEKVLKAVSIPV IGEGNLDTPEKAKNALQLGAFAVVVGGAITRPQQITKKFVDEMKK >gi|224531373|gb|GG658179.1| GENE 245 259407 - 259868 711 153 aa, chain + ## HITS:1 COG:FN1134 KEGG:ns NR:ns ## COG: FN1134 COG2731 # Protein_GI_number: 19704469 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Fusobacterium nucleatum # 1 150 5 153 155 123 44.0 2e-28 MIYDKIENIGRYLGISNYLDQAIRYIMTGNYQKAEYGRNVVAGEDIYYNCPEGAMAKNVE GMDYEYHRTYIDIHIPLKGKENIAFFEMKQGKEVKAYEEENDYGLYQGIAEGKLCIKEGE FLMLFPEEVHLALMKVEEEATPIEKVIFKVRAK >gi|224531373|gb|GG658179.1| GENE 246 260002 - 261420 2219 472 aa, chain + ## HITS:1 COG:FN1765 KEGG:ns NR:ns ## COG: FN1765 COG0469 # Protein_GI_number: 19705084 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Fusobacterium nucleatum # 1 472 4 474 475 649 72.0 0 MKKTKIVCTIGPKTESKETLKTLLQSGMNVMRLNFSHGDYAEHGARIVNFREAMKETGIR AALLLDTKGPEIRTIKLEGGKDVSIITGQTFTFTTDKSVIGNQNKVAVTYEGFARDLKVG DMVLVDDGLLSMTVTKISGNEVECIAENSGDLGENKGINLPNVKVNLPALAEKDIQDLKF GCEQKVDFIAASFIRKADDVRAVRKVLEENGGAGIQIISKIENQEGLDNFEEILEESDGI MVARGDLGVEIPVEEVPFAQKMMIQRCNAVGKIVITATQMLDSMIKNPRPTRAEANDVAN AIIDGTDAVMLSGETAKGKYPIEAVTVMKRIAEKTDPLILPVEDAHLEVGEITVTTAVAK GTADVAEMIGAKVIVVATASGRAARDMRRYFPSADILAITNNERTANQLVLTRGVTSYVD GTASSLDEFYTLAEKAVRELGLAVSGDVIIATCGEQVYINGTTNSVKVIHIK >gi|224531373|gb|GG658179.1| GENE 247 261454 - 262761 2170 435 aa, chain + ## HITS:1 COG:FN1764 KEGG:ns NR:ns ## COG: FN1764 COG0148 # Protein_GI_number: 19705083 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Fusobacterium nucleatum # 1 434 1 434 434 697 85.0 0 MTRIYDVVAREILDSRGNPTVEVDVVLECGAKGRAAVPSGASTGSHEAVELRDGDKARYL GKGVLKAVQNVNTEIKERLVGMNALDQVSIDKAMIELDGTPNKGRLGANAILGVSLAVAK AAAEALGQPLYKYLGGVNAKELPLPMMNILNGGSHADSAVDVQEFMIQPVGAKTFAEAMQ MGCEVFHHLGKLLKANGDSTNVGNEGGYAPAKIQGTEGALDLICEAVKAAGYELGKDITF AMDAASSEFAKEADGKYTYHFVREGGVVRTTEEMVDWYKSLVEKYPIVSIEDGLAEDDWA GWQKLTEALGEKVQLVGDDLFVTNTERLQKGIELKAANSILIKLNQIGTLTETLDAIEMA KRAGMTAVVSHRSGETEDATIADIAVATNAGQIKTGSTSRTDRMAKYNQLLRIEQELGDM AQYRGMKVFYNIDRK >gi|224531373|gb|GG658179.1| GENE 248 262922 - 263149 384 75 aa, chain + ## HITS:1 COG:no KEGG:FN1099 NR:ns ## KEGG: FN1099 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 75 1 75 75 78 65.0 8e-14 MSVISIRFNNKEERLIKEYVESKGTTVSQFIKDLLFKQIEEEYDLEIVQEYLKEKEAGRL NLISFEEAVKEWDID >gi|224531373|gb|GG658179.1| GENE 249 263134 - 263403 412 89 aa, chain + ## HITS:1 COG:FN1100 KEGG:ns NR:ns ## COG: FN1100 COG2026 # Protein_GI_number: 19704435 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Fusobacterium nucleatum # 1 87 1 87 88 125 74.0 2e-29 MGYRLVIPEKLNKKIIKFDKSVQKTLYSYIKKNLLDTEEPRLHGKALTGNLKGMWRYRVM DYRLIVEIQDDVLIIVAVDFDHRKKIYEK >gi|224531373|gb|GG658179.1| GENE 250 263467 - 263565 241 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKYVQILSMICLGVLLSSCVSLGVGTGITIGG >gi|224531373|gb|GG658179.1| GENE 251 263567 - 264280 813 237 aa, chain + ## HITS:1 COG:no KEGG:FN0557 NR:ns ## KEGG: FN0557 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 5 236 8 241 244 238 57.0 1e-61 MKKILLGILLAFSLVACANGTTKKEVKAKNIELVFILDRSGSMFGLEKDTIGGYNSMLQK QKEQTGDVFVTTVLFDDYYEMLYHHKNIKELPNMTEKEYFVRGSTALYDAIGKTIVNVDR EQELAEKKVDQVLFIITTDGMENASQEFTAKQVRALIEKQKKEKKWEFLFLGANIDAEET AAQFGISKEKAVNYHADSLGTQKNYKVLGEAVLQMRSGQQLKKEWKQEIEEDYKSRK >gi|224531373|gb|GG658179.1| GENE 252 264324 - 265631 2074 435 aa, chain - ## HITS:1 COG:BH2629 KEGG:ns NR:ns ## COG: BH2629 COG1875 # Protein_GI_number: 15615192 # Func_class: T Signal transduction mechanisms # Function: Predicted ATPase related to phosphate starvation-inducible protein PhoH # Organism: Bacillus halodurans # 1 435 1 442 442 375 46.0 1e-103 MRKIFVLDTNVLIHDPYCIYKFEDNEVVVPIFVIEEIDKLKRNPNTAIQARLVSRVIDEI RKKGSLYQGVELEKDIFFRVEIDNNIEDLPTVLRRDVMDNMIISVTLGIQKKNPEKRVVI VSKDINMRIKADALALEVQDYKNDKVDYSELYTGFLDISVSKEILEEYSNSGKISLEKLD VNSENLTPNCFIRMNCENDFVTGRYANGKVRKIILGDIEAWGLRARNEEQRFAMELLMDE AVKVVTLVGGAGTGKTLLAIAAALEQVVERKKYKKIFIARPIIPMGKDLGYLPGSEKEKL KPWMQPIFDNIEFLSHTRGEKTGEKVVQGLEAMGLMKIEPLTYIRGRSIPAGFIVIDEAQ NLTPLEIKTIVTRVGEDTKIVFTGDPAQIDNPYLDANTNGLTYLAEKLKNEKILGHMTLV KGERSEVAEIAAKLL >gi|224531373|gb|GG658179.1| GENE 253 265662 - 266588 381 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 4 294 1 296 306 151 33 5e-35 MEKIYDVIIVGGGPAGLTAGIYLGRGKARTLILEKANVGALLSAHKIDNYPGFLNSPSGK EIYEIMKKQALSYDVEIQEATVLAFDPYKETKIVKTDKGNFKCKYIIIASGMLKAKKVPG EAKYIGAGVSYCATCDGAFTRNRIVSLVGKGEELAEEALFLTRFAKEVHVYVTEDILEAP QEVLHALLENEKVKIQYSVSLEEVKGDGEALTSFVLKDSTGKLSEENTNFLFLYLGTKSN TELFGEFADMDSKGFIKTNEKMQIRTPNMYAIGDIREKEIRQVTTATNDGTIAASVIIKD ILTKKANK >gi|224531373|gb|GG658179.1| GENE 254 266613 - 267233 674 206 aa, chain - ## HITS:1 COG:FN1162 KEGG:ns NR:ns ## COG: FN1162 COG0491 # Protein_GI_number: 19704497 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Fusobacterium nucleatum # 1 201 1 201 207 251 59.0 5e-67 MQVKKFHLGPMMTNCFLTWGDNGTAYFFDCGGKNLDKVEAFIKDNQLSMKYLILTHGHGD HIDGIHEFIKRFPEAKIYIGKEEKEFLSNPNLNLNSYISGNNFEFDGEIHTVQGGDMIGE FLVLDTPGHTIGSKSFYHKDSNILMAGDTLFYHSYGRFDLPTGSQRQLVESLRKLCELPE NVIVYNGHTEETTIGEEKEFLGFHRR >gi|224531373|gb|GG658179.1| GENE 255 267393 - 267851 550 152 aa, chain + ## HITS:1 COG:FN0809 KEGG:ns NR:ns ## COG: FN0809 COG0219 # Protein_GI_number: 19704144 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Fusobacterium nucleatum # 1 150 1 150 150 270 84.0 1e-72 MNIVLYQPEIPYNTGNIGRSCVLTNTHLHLIKPLGFSLDEKQIKRSGLDYWHSVQLTVWE SFEEFLASDPNMRLFYATTKTKQRYSDVSYKANDYIMFGPESRGIPEEILKKNPERCITI PMIPMGRSLNLSNSAAIILYEALRQVDFDFGE >gi|224531373|gb|GG658179.1| GENE 256 267855 - 268424 820 189 aa, chain + ## HITS:1 COG:FN0214 KEGG:ns NR:ns ## COG: FN0214 COG0817 # Protein_GI_number: 19703559 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Fusobacterium nucleatum # 1 188 1 190 190 239 63.0 2e-63 MRILGIDPGTAIVGYGVIDYEKGKFHVVDYGCIYTEKDLPMEDRLIKIHEELSSLIQKYQ PEEMAVEELFYFKNNKTVISVGQARGVIVLTGRLHGLQIHSYTPLQVKMGITGYGRAEKK QIQQMVQRFLGLSEIPKPDDAADALAIAINHIHTKTSALLQIDTVCLKKLPKGTEKLSVQ EYRELFLKK >gi|224531373|gb|GG658179.1| GENE 257 268437 - 269465 1420 342 aa, chain + ## HITS:1 COG:FN0810 KEGG:ns NR:ns ## COG: FN0810 COG2008 # Protein_GI_number: 19704145 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Fusobacterium nucleatum # 1 340 1 340 340 341 49.0 1e-93 MLSFLNDYSEGGHPKVMEDLMKTNGESTVGYGFDPYCDKAREIISKKLKQENTETWFFAG GTLTNLTVIAHVLKPHQAVITAFTGHINVHETGAIEATGHKVLGLPSEDGKLTPKMIEDC LAYHEDFFFVEPKMIYISNTTEVGTIYTKKELMNLKACCEKNGLYLFMDGARLAYAFGAK ENDITWEDLGKYTDVLFIGGTKCGAMFGEAVAIIHDDLKKDFKYSIKQRGGLFAKGRLIG VQFISLLQENLYEEIGRKANEAAIVLRDGLRELGFTSPYDSPSNQQFVLMTQEEFEKISS VVLCGAEGKWRDGRCRIRFVTGWKNTVEEAKEAIEKIREVLA >gi|224531373|gb|GG658179.1| GENE 258 269476 - 270585 1081 369 aa, chain + ## HITS:1 COG:FN0732 KEGG:ns NR:ns ## COG: FN0732 COG1323 # Protein_GI_number: 19704067 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Fusobacterium nucleatum # 4 361 6 379 396 303 45.0 5e-82 MQAIGIIAEYNPFHKGHLYHLETIKEKYPNAVIIAVMSGDYVQRGEPAIISKSRRAKQAK EAGIDIVIELPAIYSTQSAEIFARASVGILHLCHCEAFVFGSETNNIERLEKIARLSLSK EFNLALKEFLSQGFSYPTAFSKALFGEKIEPNDTLGIEYIKAIWFWKSSMRAESILRKQS GYYEENQKEQMAGATVIRQKIEQKEDYSKYLVDGNYLEEPFAFWDKFYPYLRYALLFHSN SFSEIQDMEEGLENRIRKAAEEHVCYSSFLESIMTKRYTYARIQRVLLHILLGISKQKTE RWKEEIPYLRVLEFSERGQEYLRVLKKGKIPVITTKKNIQKKLSEEARELFFWNERASSF YLSVVEEKQ >gi|224531373|gb|GG658179.1| GENE 259 270582 - 271340 727 252 aa, chain + ## HITS:1 COG:FN0222 KEGG:ns NR:ns ## COG: FN0222 COG2211 # Protein_GI_number: 19703567 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Fusobacterium nucleatum # 1 252 1 252 448 308 67.0 5e-84 MKQLTTKTQIFYGLGVSYAIVDQIFAQWILYFYLPPASAGLPMIMPAIYISYALAISRFV DMVTDPLVGFLSDKLDTRFGRRIPLVAFGTIPLALTTFAFFFPPQGNPDMAFVYLAVVGS LFFTFYTIVGAPYNAMIPEIGRNQTERLNLSTWQSVFRLVYTAIAMIIPGVLIKYFGKGD NLLGIRSMVAFLCIIVVLGLAITVFTVKEKEYSSGEVSKENFKDTIRIILKERNFFYYLF GLLFFFVGFNNL >gi|224531373|gb|GG658179.1| GENE 260 271371 - 271871 560 166 aa, chain + ## HITS:1 COG:FN0222 KEGG:ns NR:ns ## COG: FN0222 COG2211 # Protein_GI_number: 19703567 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Fusobacterium nucleatum # 1 165 264 440 448 179 61.0 1e-45 MGMGKAEITIASALLFGVAALFFVPTNKVSKKYGYRKIMLSCLLLLAIFTGNLYFLGKII PVKLGFILFALLGIPIAGAAFIFPPAMLSEIANHISERSGSRIEGLCFGIQGFFLKLAFL ISILMLPLVLTMGGKLVQKAGIYNASMLSLVFFALSFFCYYRYREE >gi|224531373|gb|GG658179.1| GENE 261 271874 - 273028 753 384 aa, chain + ## HITS:1 COG:FN0223 KEGG:ns NR:ns ## COG: FN0223 COG0658 # Protein_GI_number: 19703568 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Fusobacterium nucleatum # 15 379 2 369 378 161 34.0 2e-39 MKHIIYFFLLLCLGIRLYEKIDFYELYEGEKIFLELEVYHGRGRSLNRYQTIYTKLAELE DGRYEGEFEILEKTPYYYDLEICSLRKKEENFCQRYLKACVQKLGEGRDPSFRHFLEAIL LGRAWTLFREERKLFQYVGLSHLLAISGLHVGLLFYFLEKLLLFFKIPKQTRNYLTLGIS HFYCFGIFLSPSFVRAYVMGIFYLFHELLGEKISREKMLFFSAWILLMLHPTEVLSPSFL LSYTAILTIFYVFPLLKLYFEDVPPYLSYIFYTLSIQCIGIPLTAYFFGSLACLSFFVNL LILPIGTSLILFSFFTFFLEIFHLGFLTVPILEFFYHIFYEILEWIGELPYLTIYLENKI SGELVFLSYFVIVFIVRILYLQKK >gi|224531373|gb|GG658179.1| GENE 262 273190 - 273756 768 188 aa, chain + ## HITS:1 COG:FN1907 KEGG:ns NR:ns ## COG: FN1907 COG1739 # Protein_GI_number: 19705212 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 188 4 193 195 233 62.0 2e-61 MKTIGRECEISFEEKKSKFIGYIKPVYSKEEAEEFIEKIKRLHPQATHNCSVYSIKEKGK EFFKVDDDGEPSGTAGKPMGDIVQYMEVQNLVVVATRYFGGIKLGAGGLIRNYAKTCKLA ILEAGIVDYVKKETIIIEFPYERVGEIDKLLSSSSILEKSFLDRVVYQVDVEEDLKKVIE KIPYVNII >gi|224531373|gb|GG658179.1| GENE 263 273783 - 274850 576 355 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 5 345 12 347 378 226 39 1e-57 MGKIAKKLLEYYDKHKRDLAWRGEVPAYYTWISEIMLQQTRVEAVKPYFARFIEELPNIE SLANCEEEKLMKLWQGLGYYSRARNLKKAACQIVEFYGGELPKEKKELLHLAGIGPYTAG AISSIAYGKKETAVDGNVIRVMSRLFAVDGNVLEGKGRQKIEELTYQELPEDRAGDFNQA LMDLGATICIPNGAALCHLCPLHLECQANLKKEVEKYPEKKKKKERKLERQTILLLSDGQ KFALEKRKEKGLLAGLWQFPMLEGRLSLQEVREYLKEKGISYSGIEEYEPAIHIFSHVEW HMVSYIIEVEKWEIQEKREENFVWLSKEEILTEYSVPSAFKVYLDYLKQGQRKLF >gi|224531373|gb|GG658179.1| GENE 264 274912 - 275136 263 74 aa, chain + ## HITS:1 COG:FN0538 KEGG:ns NR:ns ## COG: FN0538 COG1314 # Protein_GI_number: 19703873 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Fusobacterium nucleatum # 1 74 1 74 74 86 71.0 1e-17 METLLTVFLFILAIALIILVLIQPDQSHGMSASMGMGSSNTVFGISKDGGPLAKATKVVA ALFIIDALLLYLIK >gi|224531373|gb|GG658179.1| GENE 265 275237 - 276469 1612 410 aa, chain + ## HITS:1 COG:FN0297 KEGG:ns NR:ns ## COG: FN0297 COG2256 # Protein_GI_number: 19703642 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Fusobacterium nucleatum # 1 406 1 406 407 550 64.0 1e-156 MNLFESNYEAIKPLSFQLRPQSLDEIFGQEKLLGKHGVLRKLIETGRLTNSIFFGPPGCG KSTLGEIISHTMDCAFESLNATTASLQDIKEVVLRAKRNVEYYQKKTILFLDEIHRFNKL QQDALLSYCENGTFILIGATTENPYYSLNNALLSRVMVFEFKSLEKKEIQQILKRAQTKI GISLSPFLEEVMSEMAQGDSRVALNYLELYQNLKDSLSEEEIYQVFMERKHSFHKTQDKY DMISAMIKSMRGSDPDAAVYWLGCLLEGGEDPRYMARRIMIQACEDVGMANPEAMLVASA AMQASERIGMPEIRIILAQAVIYLAISSKSNSAYLAINQVMEEIKNGNRQEVPKNICHDN VGYLYPHDYPNHFVRQTYMEEKKRYYLPQENKYEKLIEEKLKKLWENKEG >gi|224531373|gb|GG658179.1| GENE 266 276471 - 277712 1686 413 aa, chain + ## HITS:1 COG:FN0298 KEGG:ns NR:ns ## COG: FN0298 COG0124 # Protein_GI_number: 19703643 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 410 1 413 413 609 75.0 1e-174 MKLIKAVRGTKDIIGEDALKYNYISEIAKQVFESYGCQFIKTPIFEETDLFKRGIGEATD VVEKEMYTFKDRGDRSITLRPENTASVVRSYLENAIYAKEDVSRFYYNGSMFRYERPQAG RQREFNQIGVEILGEKSPILDAEIIAMGYKLLQKLGITDLEVRINCIGSNASRTEYRKKL LEYFTPMKEDLCEDCKNRLERNPLRVLDCKVDHDKMDGAPSIIDSLFEEERAHYEAVKKY LTIFGVPFVEDPGLVRGLDYYSSTVFEIVTNKLGSQGTVLGGGRYDNLLKQLGDKDIAAF GFASGVERIMMLLEDYPKKATDVYIAWLGENTLEKAMEITALLRENNLKVAVDYNSKGMK SHMKKADKLNTKYCVILGEDELAKNVVVLKNFKTREQEEVSVENILMAIKGGK >gi|224531373|gb|GG658179.1| GENE 267 277716 - 279500 2367 594 aa, chain + ## HITS:1 COG:FN0299 KEGG:ns NR:ns ## COG: FN0299 COG0173 # Protein_GI_number: 19703644 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 592 1 592 592 941 77.0 0 MTYRSHNLGELRKENIGQVVTLSGWVDTKRDLGGLTFIDLRDREGKTQIVFDIDYTNKEI IETAQKLRNEAVIKVVGEVKERASKNLNIPTGEIEVFVKELEVLNQCDVLPFQITGTEEN LSENIRLKYRYLDIRRPKMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEGARD FLVPSRINGGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDVE MSFVTQDDVMNEIEGLAKYVFKNVTGEEANYTFERMPYAIAMGEYGSDKPDLRFEVKLKD LSDVVAKSSFKAFSATVENGGIVKAIVAPKAFEKFSRKVLGEYEDYAKQYFGAKGMAYIK IAENGEISSPIAKFFQEDEMKAILERTGAGAGDVVLIIADRAKIVHAALGALRLRVGKEL GLIDMNSYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLAGQTDNIRTNTYD LVLNGSEIGGGSIRISNTELQAKVFERLSLSPEEAKEKFGFFLDAFKYGAPPHGGLAFGI DRWLMVMLKEESIRDVIPFPKTNKGQCLMTEAPGKVEEEQLEELFLHSTFQEEK >gi|224531373|gb|GG658179.1| GENE 268 279602 - 280177 525 191 aa, chain - ## HITS:1 COG:FN1132 KEGG:ns NR:ns ## COG: FN1132 COG1057 # Protein_GI_number: 19704467 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Fusobacterium nucleatum # 1 186 1 192 193 170 47.0 2e-42 MKIGIYGGSFNPIHLGHQKIIEFILQKTLLDKIIVIPVGFPSHRANTLEKGLHRFQMCQL AFEHLSQVEVSDIEINLGETSYTYDTLMKIRKIYGEEHEYFEIIGEDSLASFHTWKKPQE ILKLAKLLVLQRETFELKSENPNIILLNSPLFPISSTEIRKQLQEKRKEIEWLNPKVLRY IREQHLYENIL >gi|224531373|gb|GG658179.1| GENE 269 280273 - 280674 521 133 aa, chain + ## HITS:1 COG:Cgl1127 KEGG:ns NR:ns ## COG: Cgl1127 COG0494 # Protein_GI_number: 19552377 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 1 130 1 129 131 75 33.0 3e-14 MKKKIQVVAAMIEREDGRVLAVLRSAKKKIGNRWEFPGGKVEEGESYFQTAEREVQEEVC CRVQAVEEMGSIYEEVEDAIIEVHFVKCLWKGTAFTLTEHDAFVWIKKENLLSLKFAEAD RPMLETLVREGKS >gi|224531373|gb|GG658179.1| GENE 270 280677 - 282011 1309 444 aa, chain + ## HITS:1 COG:FN0243 KEGG:ns NR:ns ## COG: FN0243 COG0617 # Protein_GI_number: 19703588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Fusobacterium nucleatum # 6 443 9 451 451 343 46.0 3e-94 MEEFVFPEKVLYILEELEKYGEGYLVGGSVRDILLGREVHDFDFCTNLSYETLKQIFSKY FCIETGKAFGVLRLRIDGEEFEIASFRSEKGSDGRRPEEVIFVKRIEEDLARRDFSINAM AYNQEKGLLDYYDAQKDLENKVIRFIGNPRERIQEDGLRIMRAFRFMSQLGFSLESNTKK AIMEEKGMLGKIAKSRITEEWNKLILGDFVVETLEEMKKTGVLELILPSLKSLYHFNQNN PYHSYDLWEHTMQVVKSVPKDLDLRLAAIFHDIGKPLTKTIDEKTGYYHFYGHEKKGAER IRSILQEELEESNKTRKEVEFLIENHMILHRNSSEKGIKKLISHFGIERTEKLIKLSIAD NLGKNLQQLRENNVADLFYKIVEKQKIPTLQELAIDGFALMKLGYQGKEIQKIKEYLLNE ILEGKIENKETALLSKAKELHLKS >gi|224531373|gb|GG658179.1| GENE 271 282036 - 283628 1699 530 aa, chain - ## HITS:1 COG:FN1559 KEGG:ns NR:ns ## COG: FN1559 COG3263 # Protein_GI_number: 19704891 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Fusobacterium nucleatum # 4 523 4 520 527 338 40.0 2e-92 MLPILILVSFVILLSCILDKFSLKSGVPALLLFIGLGMIFGEEGVIKIPFYDFSMANNIC STALIFIMFYGGFGTKWKEAKKIIIEASLLSSFGVFLTALLVALGIHILLHWSWLESFLF GSILSSTDAASVFSILKRKKLGLKENTAPLLEVESGSNDPCSYMMTLICLLCLTGNVSTN TLISYIFLQLGGGFFFGSILSLITRFLLKKLHFAEGLDTLFITGAVIAAYALPSYFNGNG YLSVYIFGILLGNSSFPHKENLSSFYDGVTGLAQMFIFFLLGLLSTPSRLVDSFFPAFLI FLILTFIARPISVFSLLLPFRSSTEKKILVSFGGLRGAASIVFAIMTIVHDYTPKQDIFH IVFCVVLLSMIFQGSFLAWMAIRLKMIDTEVDVMEIFTSYASKTKLQFFEIAIPQNHYWI SMKIKDLLLPPNILILNILRKEKQIVPYGDFIIQENDIITFSVLGNHKKLSFNIDMYTLP SGSKWIGKSIQEYGEKKNSFISLIIRKEKAMMPKANLLLEEDDQIYFHKK >gi|224531373|gb|GG658179.1| GENE 272 283748 - 284722 972 324 aa, chain + ## HITS:1 COG:AF0088 KEGG:ns NR:ns ## COG: AF0088 COG0715 # Protein_GI_number: 11497708 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Archaeoglobus fulgidus # 19 308 16 299 300 198 36.0 1e-50 MYRKLFVTFWIIILFVSCGLEKVQDKKMKVGILSIADSGALFVAEKEQLFLKNGLDVELI PFGSAVEQSRAMEAGELDAMMTDAIVQNLVNQGENNLKEVLVALGDTAEHGKFLILASPT TEHNSLKNLSGAKLGISENTMMEFLVDSYFSLLNLEIHDVEKVNIPSLSLRMEMLLQGKI DLAILPEPLGDFAVLQGAKIVLDDTKLNENLSQSIIVFRESYIEKNFLEVKKFVKSYSEA AKMINEAPDQYKDYIFEMANIPEILKSSYRLPYYSIASVTERQLFDKMQNWMIQKKLLTQ TKDYSSSIDSRFIDIVGEENDSVK >gi|224531373|gb|GG658179.1| GENE 273 284706 - 285446 222 246 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 202 1 210 245 90 32 1e-16 MIVLNNVSASYLDGNTKKKVIENLDLVIKEKCNVSIMGSSGCGKTTLLKVIAGLKKIEEG SISYRGKKYNTPIPEISLLFQNYGLLDWKTAEENILLPIYLRRIQKDSEKFSQLVKDLGL EKCLHKYPSQLSGGEKQRVAIGRALMTECKFLLLDEAFSSLDFVTKERIQNHLKKVFMKR GVTIILVTHSIEEALFWGDKIIIFESSTSKTPHILGNYKESCDKEDWKKKEKILKRIKRI QNEEIK >gi|224531373|gb|GG658179.1| GENE 274 285430 - 286185 647 251 aa, chain + ## HITS:1 COG:AF0086 KEGG:ns NR:ns ## COG: AF0086 COG0600 # Protein_GI_number: 11497706 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Archaeoglobus fulgidus # 8 244 12 243 244 153 39.0 2e-37 MKKLSKKIIAIFEIFLFWYCMSIVLKKDLLPNPMITLETTFTLLITSSQIWIHVLVSLYR VMLGILLGTVFSIPMGILLGYSKRIEKYFGEAFDFLYMIPKIVFLPIFFVLLGIGDLSKI ALIATVLFFQQTILIRDNVKNISEEIYDSIRILQASFWQIIQHVVFPSCLSGIFTSVKSS LGISFALLFITENFASQSGLGYFITKCMDRRDYVTMYAAILILAILGCILYTIFCFLERK ICKWKFLNYKE >gi|224531373|gb|GG658179.1| GENE 275 286423 - 287730 1789 435 aa, chain + ## HITS:1 COG:CAC0872 KEGG:ns NR:ns ## COG: CAC0872 COG2233 # Protein_GI_number: 15894159 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Clostridium acetobutylicum # 8 427 15 431 435 253 36.0 4e-67 MTRNKSPYDIDGVPALREALPLGLQHILAMFVANITPIMIVGGALNLPAEEIAILIQASM LVAGLNTFIQTYRFGPVGARLPIVVGSNFTFVPLAITIGNNYGYEAVLGAALVGGIFEAC LGFFIQKVRRFFPSVVTGVIVLSIGLSLLPVGIASLAGGFGAGDFGSFENLAIGCFVLII IILFKQFAKGIWSTGSIFIGTMIGFILTLVMGKVDLSTVAQAGYLNLPMPFRYGFIFKSD AILAMMLLFVVSAVETLGDMSSVTMGGADRELTDKELSGGIVADGIGASLASIFGILPTT SFSQNTGIITMTKVMSRYVVGLGAVILMIGAFFPKVGALLTVIPPSVIGGSLVMIFAMIS ISGINLLTKEKLTGRNAVIVAVSLGLGYGLGSVPDALAHFPESLKLLFGGSGIVISGGIA IILNIVLPHDEKIFE >gi|224531373|gb|GG658179.1| GENE 276 287749 - 288315 813 188 aa, chain + ## HITS:1 COG:BH1514 KEGG:ns NR:ns ## COG: BH1514 COG0503 # Protein_GI_number: 15614077 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Bacillus halodurans # 1 185 1 186 198 182 51.0 3e-46 MQLMKDYIQKYGVAIGDNILKVDSFLNHQIDPYLMMEVGKEFKQRFEGKGINKILTIEAS GIAVGITTAFAFQVPMVFAKKNKPSTMSDSYNATVFSFTKNKEYNITVAKEFIQKGDKIL IIDDFLALGNAILGLKSLCEQAGAEVVGVGIAIEKGFQAGGKMLRESGLHVESLAIVDSL QNGKIITR >gi|224531373|gb|GG658179.1| GENE 277 288426 - 289664 1139 412 aa, chain - ## HITS:1 COG:Cgl2031 KEGG:ns NR:ns ## COG: Cgl2031 COG1473 # Protein_GI_number: 19553281 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Corynebacterium glutamicum # 17 406 18 421 421 283 41.0 3e-76 MSTEKVLKSIEKIAKEQEDFYKYLHSHPELSMEESNTANMVCEKLVSFGYDVQRIGGGIV GVLKNGEGKTVLYRADMDALPIKEISNLAYASSVTQKNLKGEMVPVMHACGHDFHVTAGI GAAWAMANNKDEWSGTYIALFQPGEELGCGSQSMVEDGLVEKIPHPDIAFAQHVLVAPKS GMVGVCPGPFLSTAASIDIKVYGKGSHGSMPHLSVDTVVLAANIVTRLQTIVAREINPMD MAVLTVGALNAGDTSNIIPQEAVIKINIRAYTDEVREHLIEAIKRTVKAECTASRSPKDP EFKIYNEYPPTINDKEAAFKLQEAFKKYLGEDRVEKDYQPMSASEDFSNIPNAFGIPYVF WGFGAYNKKEDILPNHNPAFAPDLHPTMETGTEAAIVAAMSYLEKNDIKKGF >gi|224531373|gb|GG658179.1| GENE 278 289972 - 290715 1203 247 aa, chain + ## HITS:1 COG:FN0807 KEGG:ns NR:ns ## COG: FN0807 COG1212 # Protein_GI_number: 19704142 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Fusobacterium nucleatum # 1 244 1 245 245 333 67.0 2e-91 MKFLGVIPARYASTRLEGKPLKDICGHSMIEWVYRRCKNTKLDDVIVATDDERIFREVER FGGKVIMTSTEHSNGTSRIAEVCQKITDYDVIINIQGDEPLIEADMIDMIVDAFQQEELC MCTLKHKLDSWEDIENPNQVKVVTDKNDYALYFSRSILPYPRKENIDLYYKHIGIYGYTR NFVLEYAAMASTPLESSESLEQLRVLENGYQIKVLETSHQSVGVDTQEDLEKVCKWIEER GITIENY >gi|224531373|gb|GG658179.1| GENE 279 290702 - 292228 1852 508 aa, chain + ## HITS:1 COG:FN0806 KEGG:ns NR:ns ## COG: FN0806 COG2385 # Protein_GI_number: 19704141 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Sporulation protein and related proteins # Organism: Fusobacterium nucleatum # 174 508 1 333 333 316 51.0 9e-86 MKITKIAAACCLALLFVSCSNGKIKEKTETWGAIQRRNTRPMDNAYSLLNGKDYPRVENN FGKEVPYLQPVNDTKKEDFFEKYDEKKAMQFFKNLKIEGYGSNSMYWRWKTSISKSALFQ KIAQRIPQISARGRRNVFVLKDGVWLNNQKISDVGFVKDMKVLSRGASGVITHLLVETSK GSYLITKEYNIRRLLATNGKVFGARSGSSDYGKTAIANGNALLPSASLAFDIGTFSVDIY GAGFGHGTGMIQYGAGDLASNYGLSYQQILDHYYTNVDLVDMETVSGVEQNIKVGVTKPN GSLEHGSICLTGSGKLRVYAEDESFDYTFDPNTEIRVTPKAGRLYIKTDVKEFWTNKKFF VDGGGYYLLVKNLRKAHTNNPRYRGKMQFVPNGNTLHMISVVDMEDYLKQVVPSEMPRSF GVEALKVQAVAARTYAISDFLKGRYAALGFHVKDTTESQVYNNQVENEDANRAIEATRGK ILVYHGVPIDAKYSSTSAGFTEAAHHVW >gi|224531373|gb|GG658179.1| GENE 280 292247 - 295093 3378 948 aa, chain + ## HITS:1 COG:FN1103 KEGG:ns NR:ns ## COG: FN1103 COG0178 # Protein_GI_number: 19704438 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Fusobacterium nucleatum # 1 941 16 956 960 1501 79.0 0 MLEKIVIKGARQHNLKNLDLEIPKNKFVVITGVSGSGKSSLAFDTIYSEGQRRYVESLSS YARQFIGQMNKPEVDSIEGLAPAISIEQKTTNRNPRSTVGTITEVYDYMRLLFAHIGTAH CPICGRKVEKQSLEEIAETILEKFEEGQKMILLSPVIKDKKGTHKNIFLNLQKKGFVRVR VDGEILYVEDEISLDKNKKHTIEAVVDRLALKKEDKEFASRLTQSLEVASGLSDGKIILQ VGKEDMLFSENYACPEHEEVSIPDLSPRLFSFNAPFGACPECKGIGKKLEIDENKLIEDE NLSILEGGMYIPGAASRKGYTWEIFKAMAKHFHLDLGKPVKELTKEERDLIFYGKSVHFQ VDYEGNGYSFHGLKEYEGAVANLERRYRESFSEAQKEEIENKYMIEKPCKLCHGKRLKEE VLAVTIAEKNIIEITEMSIADAYQFFLDLSLTKKQEKIAKEILKEIRERLQFMINVGLDY LSLARETKTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQKDNDKLLATLSHLRNL GNTLIVVEHDEDTMMQAEEIIDIGPGAGVYGGEIVAHGSPNEIMKNKNSLTGQYLSGKKK ILIPEKRREWSKSLVLQGACGNNLKNVTVEIPLEIMTVVTGVSGSGKSTLINQTLYPILF NRLNKGKLYPLEYQSIEGLEYLEKVINIDQSPIGRTPRSNPATYTKIFDDIRDLFSQTKD AKLHGFDKGRFSFNVKGGRCEACQGAGILKIEMNFLADVYVECEVCKGKRYNKETLDVYY KGKNIAEVLNMSVIEAYEFFKNIPSLERKLKVLVDVGLDYIKLGQSATTLSGGEAQRIKL AAELSKNTRGKTIYILDEPTTGLHFQDIEKLLEVLQRLVEKGNTVLIIEHNLDVIKTADY IIDIGKDGGARGGEILATGTPEEIAKIKDSYTGKYLSKILKKMKETKK >gi|224531373|gb|GG658179.1| GENE 281 295102 - 295683 976 193 aa, chain + ## HITS:1 COG:FN1104 KEGG:ns NR:ns ## COG: FN1104 COG0632 # Protein_GI_number: 19704439 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Fusobacterium nucleatum # 1 193 1 191 194 179 52.0 3e-45 MFEYLEGIVAYKKPEYFALEVHGIAYRVYISLRMYEKIEVGKSYRVYIYNHIREEEYKLI GFLEEKERKLFELLLSVKGIGVSLALAALSTYPVEQLVAYIQEEKVGQLKKIPKLGEKKA QQIILDIQSKLKHFGVEQRLVEDSSMAWAEDIASALENLGYAKKEVEHLLQHENWIEYQS LEEAMKAILKKMK >gi|224531373|gb|GG658179.1| GENE 282 295704 - 296297 753 197 aa, chain + ## HITS:1 COG:FN0808 KEGG:ns NR:ns ## COG: FN0808 COG0406 # Protein_GI_number: 19704143 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Fusobacterium nucleatum # 1 194 1 194 206 166 43.0 2e-41 MKLYFVRHGETEWNTQRRFQGRKNSPLTEKGEQQAKNIAEVLRNIPFTRLYSSSLGRARK TAQEIQKGRGIPLEIMDEFIEISMGELEGKTKSDFAELYPEEYEKYLHASLDYNPQAFRG ETFEEIQDRLRKGMNDLVRKHEEEDVILVVSHGMTLQILFTDLRHGNLERLREEKLPENT EVRVVEYKDQQFIIQSI >gi|224531373|gb|GG658179.1| GENE 283 296307 - 297581 1392 424 aa, chain + ## HITS:1 COG:no KEGG:FN0825 NR:ns ## KEGG: FN0825 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 21 421 2 410 410 142 27.0 3e-32 MKKYLILFFCFSCSLLAKEQSFEEMLRQVSKSSYEEEKYQLEQEGLSIRREHSKGRDFQE GLIANLEYTEHHRHKERNDYIKKGTLQWGPFFVSAYDPGEKEGEYVGVGIEKNLKDLFYS QYDSQLRQLKWDEKAKFWNYQNHRQKKMIAFIELYRDYKNALYELEIKGQERKRLEKEEA KLALSYRLGNAKRVDWQAANFGLQNLALEISALEKQKKAYEERFRREFRISLEGKSIQEI PLLEVEFQDVLEEYGRAELEEEKAKLKVQEEALRYSIYEEKIPDVSILYEHSSKNHKRLE EDMLSLKFRKKLFADHYNSKILQNEIKEQELFLAQREEEIKAERELMIANYENYQSQYQV AQNRAQLESSKYEIKKLEYDLGKIDYIDVMEAFDKYLDAKISLEKSKNRLAAYLYEWKVR KVEK >gi|224531373|gb|GG658179.1| GENE 284 297578 - 298651 1377 357 aa, chain + ## HITS:1 COG:FN0826 KEGG:ns NR:ns ## COG: FN0826 COG0845 # Protein_GI_number: 19704161 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Fusobacterium nucleatum # 36 346 1 309 338 243 43.0 4e-64 MKKKVIVGLLLMAVIGIGVWKFHKKSEREEKVYSIISVHKKQGNGYIEAKGRVEVNDTIS VFVDKSLKVKEIFVKEGDYVEKGQILMTFDDLSKNKLLRAMERERLQLQKLKRNYEVERS LEKIGGASLNSLKDMQEEIRIHELNLEEYQEDFQKTASEIVSPANGTVSSLTAQENYLVN TDTPLLKIADLSNIKIVLEIPEYNVRYLKLGEKLSLQPEIFEEKESFSGEIVRIGKIAKV SPSTSENILEVEVKPLEEIPYIVPGFKVSAKIELQETKEEKRILIPKTALLEENGSFYVF SLAENQLAMKKGVEAEILSGQEAAILKGLQEGDKIIANPDVSLKEGDKILDSNQKSK >gi|224531373|gb|GG658179.1| GENE 285 298626 - 299300 319 224 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 219 1 218 245 127 32 7e-28 MIQIKKVNKYYINGENKLHALQDVDFHIQKGEFVSIMGSSGSGKSTMMNILGCLDREFEG EYVLDGISIREIAEKNLCKVRNQKIGFVFQSFHLLPKLSALENVELPLVYAGISKKEREE RAKKMLEIVGLGTRLHHRPNELSGGQRQRVAIARALVNDPAIILADEPTGNLDSQSEKEI MNFFQELHQKGKTIVVVTHEPEVAKYTKRILHFKDGKLLGEDVL >gi|224531373|gb|GG658179.1| GENE 286 299369 - 300523 1424 384 aa, chain + ## HITS:1 COG:FN0828 KEGG:ns NR:ns ## COG: FN0828 COG0577 # Protein_GI_number: 19704163 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 383 25 408 408 369 52.0 1e-102 MLGIIIGISSVMSMWSIGRGGQEGITGNLKKNGYGKFTVTVDSSKDDFRYKYLFSLSQMK DLKEEGHFKNVAAQIEEYFGIKIGEEKEGILINMSTPDYEVLDPVEMMAGRNFLSFEYSP KEYVVLLDNLTAKSLFGTEKNAIGKEIEISKRRRGMNLSYRVVGVFRNPLESFIRVMKTG FFPRFARIPYQNYNYVFDKGSGVFTDILIEAKNPENLGQEMEEAKNYLEQKNQIQNIYTT RTVASDTESFDQILSTLNIFITFASAISLFVGGIGVMNIMLVTVVERTKEIGIRKSLGAT NRDILIQFLVEAVILTVMGGLIGLILGFFISFSAGKLLGIQPIYSLTSILLSLGVSISIG IIFGVSPARKAANLNPIDALRAES >gi|224531373|gb|GG658179.1| GENE 287 300542 - 301024 514 160 aa, chain + ## HITS:1 COG:FN0778 KEGG:ns NR:ns ## COG: FN0778 COG0500 # Protein_GI_number: 19704113 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 1 151 1 153 412 90 39.0 1e-18 MTAKEAMELLEELIQEKKLIKIVLSDKEVDAEWDKVLIRPVKIKEQDFMQFEKFKNNKSY HFNMEAACLYEEISISVKQFKQAYIHSEGKNYHLRRKGDKYFSKESGNTCCQKILEHNKT KKYLLAEGKPIDFLVYLGVMSKEGKVYKHSYANIVKSISI >gi|224531373|gb|GG658179.1| GENE 288 301201 - 301707 456 168 aa, chain + ## HITS:1 COG:FN0778 KEGG:ns NR:ns ## COG: FN0778 COG0500 # Protein_GI_number: 19704113 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 1 168 224 394 412 189 59.0 1e-48 MKHCNKIAKELGYENLEFLTGNIKDFEKLQEVDLVFSLHACDNATDYSILKALEMKAKAI LAVPCCQHEFFQKINKNKKSPLFHSMNVLGKHGILLERFSSLATDAYRSSFLELKGYRTQ VMEFIDMEHTPKNILMKAIYEGKVKNEQKKYEEYQEFLNFLGIDPLLK >gi|224531373|gb|GG658179.1| GENE 289 303204 - 304712 1650 502 aa, chain - ## HITS:1 COG:FN0998 KEGG:ns NR:ns ## COG: FN0998 COG0747 # Protein_GI_number: 19704333 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 499 1 498 500 321 37.0 3e-87 MKKLLACIFCLTFFFACGKKEQAPVSVENHQQTVTVALAYKPKSFDPSKHTDGVTMSVTK QIYSNLFSLGEKGEIIPELAESYKIVSENTLDITLKKGILFHDGSEMKADDVIASLQRNL DSPVSHVLINPIQSMKKLNEYELEITSNTSPNLLLHNFTHGSIAITKEVPMNEDQVNLVG TGPFKIKLWGNGEKIELEAFDDFYIQKPNFQNLVFVTIPETSNRVIGLETGEIDIAYDII PSDLSLLTEEKGLTYMSGLSFGSDFLSINTERMNDVDIRRALALAIDKKGINEAVFEGKL DLASSILPPNVFGYSDSGIEISQNVEEAKKIMKEKGYDETHPLSLKMYIYEEPTRRQISE IIQANLKEIYMDVEVVSLEVSSFLQFTAQGQHDFLLGLWYTSSGDADFGYYPLLHSSSKG VPGNRAFYDNKEVDQLLDDARTTSSEKQRLEDYAKVQKIIDQELPIFPLFYKTYFIGMRN HISNLVFDPRGSHILYNLQFSK >gi|224531373|gb|GG658179.1| GENE 290 304734 - 305891 1120 385 aa, chain - ## HITS:1 COG:no KEGG:Ilyop_1346 NR:ns ## KEGG: Ilyop_1346 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 1 191 1 194 509 149 45.0 2e-34 MITEKEYFLLALLAYCDFSKKHIGKNLWKIWEEEKEKKTFRTSFTLLQSKFYPQFMTFFE EELKKWFIIRIDNRKAKKISSSQSGFFSVCFGNSKQEYVISYRGSEVYPLEDAYQDFINT DLTIGMGKIPIQFHEGIEVVEKLVQDLGLKYPQISLTGHSLGGGIAQYVAFSLHNLHQYI PITYTWNAVGITHIEELSIQKIKRNIDYQKKIVNYGHSEDFTNSLFSHIGKQYFVDRKLS SKRINHRNFLEKIPFLKKSLSSFHCENVFLPFFGEGKSLQKKVCLAYLAAACRKLIMQEK LFSKDFLADYYLQTDLSKITLEKYRRELIEALKKYTKALYCKQIIEQLEDFSPQDMQVFW KEFLRRIASPYRYLDVFDILVYEYI >gi|224531373|gb|GG658179.1| GENE 291 305898 - 306632 924 244 aa, chain - ## HITS:1 COG:L95012 KEGG:ns NR:ns ## COG: L95012 COG0818 # Protein_GI_number: 15673069 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Lactococcus lactis # 2 120 21 142 151 90 42.0 2e-18 MKPYQESEFKNKKMTDGFNSAIEGVFETIRTEKHMKFHAFATILIIVIGLFINLSRYELL SLIISISFVWLAELFNTAIECCVDLTCQEYNLLAKKAKDVAAGAVLLSAFNALIIGYLVF SKHIGVQLQQSFRVLRSSYQHKTVLIFIVVLSIVLLIKLITQKGTPLQGGMPSGHSALAS SIFTIISFLTDNPKVFYLSFLLLILVIQSRVEGKIHTLLETLVGAFLGSSITYLILYLLK YKAW >gi|224531373|gb|GG658179.1| GENE 292 306635 - 307129 777 164 aa, chain - ## HITS:1 COG:FN0746 KEGG:ns NR:ns ## COG: FN0746 COG0319 # Protein_GI_number: 19704081 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Fusobacterium nucleatum # 1 164 1 162 162 191 70.0 5e-49 MELLVEVSVEYKKNDYAEFIQEITENNNEVLTEYIEEVLTMEKIESTLPLYVSLLLTGNE QIQGINREFRKKDSPTDVISFAYHENEDFLVGPYDTLGDIVISLDRVGEQAKEYNHSFTR EFYYVLTHGILHILGYDHIEEEDKKEMREREEEILGHFGYTREK >gi|224531373|gb|GG658179.1| GENE 293 307141 - 309240 739 699 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762592|ref|ZP_02169656.1| ribosomal protein S21 [Bacillus selenitireducens MLS10] # 66 698 52 734 750 289 29 1e-76 MKKYNLFGFHISLDVKRNHNKEKEAELYSHEYLLREKIIYYILLMSVACFFYYVPLVMRD KYYKVGDITISDIFAPKTIVFRDDDTREKIIQEIVDTSQREYIFSSDTQKIYVELLQKFM QEAIEVKKGSIKSIDYNYYEKQTGKKFPETVDKDLMSYRVKDLTYLQSLWTNDLTAIYNA GVYRENDYSQDSTILRYGAPFDKEFEELTKLEKDVLSVFISPNYIFDSKGTTVELEEKLK QIPDQYMQIKAGTLIASKGEMLDKRKIHILESLGIYSLKRGFIILFSTILYLIFVSSIFY TIALHLFQNEILNKNKFRGVFLILFAIFGLFWIVPLDMIYFIPLDSALFLLVFLTGKRYS SFIYASVLAFLLPLTDYNLTLFAMHLTCLSFSIFLIQKVNTRNGLIATGIQLSIFKLFIF FILSFFAKEESFNIMFQSMQIMISGFFSGMVAIALLPFFERTFNILTVFQLSELGDLSHP LLRKLAMDAPGTFQHSMMVATLSENAALAIKANSVFTRVACYYHDIGKCKRPNYYVENQK NGENPHNDISPFMSTLIITSHTKDGDDMAKKYQIPKEIRDIMYEHQGTTFLAYFYNKAKA IDPNVLKEEFRYSGPKPRSKESAIIMLADSIEAAVRSLSVKTPREVETMIRKIINGKVED DQLSEADLTFKEIEAIVQSFLKTFSSIYHERLKYPGQKN >gi|224531373|gb|GG658179.1| GENE 294 309251 - 311329 2703 692 aa, chain - ## HITS:1 COG:FN0743 KEGG:ns NR:ns ## COG: FN0743 COG1199 # Protein_GI_number: 19704078 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Fusobacterium nucleatum # 6 692 53 741 741 710 53.0 0 MDIAELSHHIPNFEYRKEQVDMMNAIRESLEADRKIIIEAGTGTGKTLAYLIPTLEWAIE NKKKVICTTNTINLQEQLLFKDLPIAKNIINKHFSYLLVKGRNNYICKRLFHNFILGNSL DISTLSSEQKKQFDYLKSWGKMTEFGDKAELPFEVDSDIWEMIQSSSEFCQGKRCPFREE CFYMKNRALKASADLIVCNHHIFFADLNVRNSVDFDAEYLILPKYDVVVFDEAHNIESVA RSYFSLEVSRYSFVRMLNQIQNQEKTKKRKVLPALETLLQSLPTEKKQEKEFRKALQNIE QEHLKCLEIGLDFFETLANHFLKNHQGKISKSLQKDEMLFSPFLSPLREKKDHFILAMKS YSIALDYFYSQVKDGEEQNQYLMDFQNFAFKLKSFLATFQEIHQFDNDDFVYWIEANAKY KNAALVAAPLNIDQILKESLFVHLERLIFTSATLAVNGDFSYFKIAVGLEEDTMEKMIPS PFFYDDQMTVYIPSDLVDPDKSFDFVEEVSEFLKQLFLKTGGRAFVLFTSYSSLNQIYYS MLEDLQEAGITVLLHGEKPRSQLISDFKRVENPVLFGTSSFWEGVDIQGEQLRNVVIIKL PFLVPSDPVVSAISAKFEKQKRNPFMEYQLPEAVIKFKQGIGRLVRSKEDYGNIFILDNR ILKKRYGKVFLDSIPSKNIQILEKNQILKIVK >gi|224531373|gb|GG658179.1| GENE 295 311559 - 313028 2127 489 aa, chain + ## HITS:1 COG:FN1547_1 KEGG:ns NR:ns ## COG: FN1547_1 COG1263 # Protein_GI_number: 19704879 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Fusobacterium nucleatum # 1 394 1 394 411 583 78.0 1e-166 MFSYLQKIGKALMVPVAVLPAAAILMGIGYWIDPTGWGANSQLAAFLIKAGAAIIDNMAI LFAVGVAFGMSKDKNGAAALTGLVAFQVVTTLLSSGSVAQLLSIAPEEVNPAFGRINNQF IGILCGVISAELYNRFSGIELPKFLAFFSGKRFVPIITSGVMIVVSFILMYVWPLIFSAL SSFGVKIASMGAVGAGIYGFFNRLLIPVGLHHALNSVFWFNLAGINDIGRFWGAPDAAYA DLPAAIQGAYHVGMYQAGFFPIMMFGLLGACAAFVKTAKVENRAKVMSIMTAAGFASFFT GVTEPIEFAFMFVAPVLYLLHAVLTGIAVFLAASFNWMAGFGFSAGLVDLVLSSRNPNAH NWYMLIVLGIIFFVVYYLVFYVAITKFDLKTPGREVEEEEIQAQQKEKISNNLLANQLIP LLGGSENIEEIDYCTTRLRLRVKESANINDKEIKKLVPGLLKPSKNTVQVIIGPEVEFIA DEMKRVLNK >gi|224531373|gb|GG658179.1| GENE 296 313087 - 313185 60 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMVYKMILLLDYIANYFPYVNTLSNLFHKEMK >gi|224531373|gb|GG658179.1| GENE 297 313211 - 315280 2742 689 aa, chain + ## HITS:1 COG:FN1546 KEGG:ns NR:ns ## COG: FN1546 COG0480 # Protein_GI_number: 19704878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 684 3 686 690 1100 78.0 0 MKVYETSMIRNVSLLGHRGSGKTTLVEAILHSKDVIKKMGSVEQGTTVSDFDKEEERRLF SINTSLIPVEHEDYKINFLDTPGYFDFVGEAISALRVSASAVLVLDATSGVEVGAQKAWR MLEDRKLPRIIFVNKMDKGYVNYGKLLQELKEKFGKKIAPFCIPIGEKEEFKGFVNVVDL VGRIYNGKECVDAPIPEDIDVTEVRSLLMEAIAENDEALMEKYFAGEEFTQEEIEQGLHK GVVSGDIVPVLVGSAMEEVGVHTLLHMIQLYMPTPVELFDGQRIGKDPITQEKKIVDIKT ENPFSAIVFKTMVDPFIGKITLFKVNSGVLRKDMEVLNPNKNKKERIAQVMSLMGNKQIE VEELRAGDIGATTKLQYTQTGDTLCQKEYPVMFQEIAFPKPILFSGVKPADKNDDEKLST CLQRMMEEDPTFKITRNYETKQLLIGGQGEKHLYIILCKIKNKFGVHAELEDVVVAYRET ILGKAEVQGKHKKQSGGAGQYGDVHIRFEHSETDFEFVDEIKGGVVPKQYLPAVEKGLLE AREKGILAGYPTINFKATIFDGSYHAVDSNELSFKLAAILAFKKGMEMAKPKLLEPVVRM EIHIPDEYMGDVMGDLNKRRGRVLGMEPNQYGDQVLFVEVPEVEILKYCVDLRAMTQGRG EFQYEFVRYEEVPEILSKKIIEARAEATK >gi|224531373|gb|GG658179.1| GENE 298 315308 - 316681 1600 457 aa, chain + ## HITS:1 COG:FN1949 KEGG:ns NR:ns ## COG: FN1949 COG0006 # Protein_GI_number: 19705251 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Fusobacterium nucleatum # 1 456 1 460 462 513 57.0 1e-145 MITKEILQKRRNELKTLQEADLILLPSNMDSPMNCKDNCYPFIQDASFQYYFGMNYPNLV GVIDLKKKKEYVFGKDFSMSDIIWMGKIKFLKEEAEELGLEFRDLEELPKWIENRKVAIT NYYRADTVFYMAKLLGKDPYRLGEHISEELISKIIEQRNHKSNEELEELEKAVNVTREMH LEAMRVTRVGMKEYEVVAALEAVAAKHQCSLSFQTIFSKNGQILHNHRHDNVLQEGDLVI LDAGAKLPSGYCGDMTTTFPVSKKYSDRQRKIYNIVIHMFERAEELCRPGITYREVHLEV CKVMVEELKTLGLLYGEVDNIVTAGAHALFMPHGLGHMLGLDVHDMENFGEEKVGYAEFP KSSQFGLSSLRLGRELEEGFVYTIEPGIYFIPDLFELWRKERKFEEFLNYDVIESYMDFG GIRYEGDFVITKDSCRRLGEKMLKYPEEIEEYRKKFL >gi|224531373|gb|GG658179.1| GENE 299 316715 - 318673 2273 652 aa, chain - ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 279 645 5 366 372 313 46.0 6e-85 MTAKRNILLQSALGSVFSISEQLSIETQTPETGTKVIVAGRVEKPGVVDIEEGMTLQDVI NAVGGIKNKKQFKAAQFGIPFGGFLTSKHLDKPIDFSLFPENERNMIILSDEDCIISFSK FYIEFLQDMVSENDEKYAAYHQVTHEVERIGRILDRISKGKSNMRDVYLLRYLSDIIKTK LNQKHNMVLEIIDTFYDEIEEHVEDLKCPAGQCIHLLKFKITEKCIGCTACARVCPVQCI TGAPKKRHFLDTSRCTHCGQCVSACPVGAIFEGDHTLKLLKDLATPKRLVVAQIAPAVRV AIGEAFGFEAGENVEKKLVAALKAIGFDYVFDTAWAADITIMEEASEFQERLERFYAEDP TVRLPILTSCCPAWVKFIEQNYPDMLDVPSTVKSPMQIFSTIAKDIWAKELGYEREKVTV VGIMPCLAKKYEAARFEFSRGDNYDTDYVISTRELIRIFKETGIDLKELEDEDFDNPLGQ YSGAGIIFGRTGGVIEAATRSTIEMITGEKIPQIEFQELRGWEGFRIAELKIGHIELRIG IAHGLEEAAKMLDKIRSGEEFFHAIEIMACKGGCIGGGGQPKALKKQVILEKRAEGLNNI DRSLEIRTSHDNPMVKAIYEKYLDYPLSHKAHELLHTKYFNRTRRNHRQPSK >gi|224531373|gb|GG658179.1| GENE 300 318701 - 319165 456 154 aa, chain - ## HITS:1 COG:FN0742 KEGG:ns NR:ns ## COG: FN0742 COG4807 # Protein_GI_number: 19704077 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 153 1 155 156 167 61.0 5e-42 MTNNDILKRLRYALSISDKLAVKIFHLGKSQVTEEEFCSLLLRTDEDDFKKCSNSLLFSF LDGLIILKRGNLEKPVEEIKITKNNLNNLILRKLKIALNLKSDEMLSFFKLGGAELSSSE LSALFRKEGHKNYRECGDKYIRVFLKGLTEYYRK >gi|224531373|gb|GG658179.1| GENE 301 319165 - 320376 1660 403 aa, chain - ## HITS:1 COG:FN0512 KEGG:ns NR:ns ## COG: FN0512 COG0426 # Protein_GI_number: 19703847 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 403 1 403 403 630 72.0 1e-180 MYCCTKVTEDVIWIGINDRKTERFENYLPLDNGVTYNSYLIYDEKTCAIDAVEVGQSGPF YAKLENSLGGRKLDYLVVNHVEPDHSGAIKELFRVYPELKVIGNMKTLDMLKAFDEDFPV DAFITIKEKEIFDLGKHKLTFYTMPMVHWPESMCTYDMTDKILFSNDAFGSFGALDGGIF DDEVNHEFYEDEMRRYYSNIVGKYGSSVNAIMKKLSGVDIQYICPSHGILWRSDIGKILG LYQKWANLEPEKEGVVIIYGSMYGHTAEMAEILGRELGNRGIHDVIIYDASRTDHSYIIS KIWKYKGLMIGSCAHNNAVYPKVEPLLHKLENYGLKNRYLGIFGTMMWSGGGVKAICEFA SKLKGLEVIGDPIEIKGKATSLDIDQLQWLASQMADKLIGERK >gi|224531373|gb|GG658179.1| GENE 302 320595 - 321542 1645 315 aa, chain + ## HITS:1 COG:FN0174 KEGG:ns NR:ns ## COG: FN0174 COG2070 # Protein_GI_number: 19703519 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Fusobacterium nucleatum # 3 312 2 310 318 369 67.0 1e-102 MKKTDRLCELFGIEYPIFQGAMAWIANGNLAGSVSRDGGLGIIAGGGMPGDVLRAEIKKA KAIAGAKPIGVNLMLMADNIEEQVNICVEEKVEVVTTGAGNPGVYMETLKEAGIKVCPVV ASVALAKRMEKIGADAIIAEGMEGGGHIGTITTMSLLPQIVDAVNIPVICAGGVASGRQM LAALAMGASGVQCGTIFIVAKECQVHDNYKKAILKAKDRSTVSTGNYTGHPVRVLENKFA KEILEMEKNGAPKEEIEAMGTGKLRLAVVDGDIVAGSVMAGQVAAMVQEEKTTKEILVTL MEELTVAKENLKNEF >gi|224531373|gb|GG658179.1| GENE 303 321698 - 322132 340 144 aa, chain + ## HITS:1 COG:BH2524 KEGG:ns NR:ns ## COG: BH2524 COG2826 # Protein_GI_number: 15615087 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS30 family # Organism: Bacillus halodurans # 1 144 1 146 314 107 47.0 1e-23 MSYTHLTIIQRNMIEILRKEKYSTRKIATLLGVHHSTIARELNRLVGLYSATLAQEHATK RNLKKGRPCKLQDKFSHIIQERLKQTWSPEQIVGREFLKQLSVKTIYNCFHKGLLPIDKS ILRRKGKLLKSKETRGKFTIGRSI >gi|224531373|gb|GG658179.1| GENE 304 322295 - 322633 293 112 aa, chain + ## HITS:1 COG:BH2524 KEGG:ns NR:ns ## COG: BH2524 COG2826 # Protein_GI_number: 15615087 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS30 family # Organism: Bacillus halodurans # 1 111 202 313 314 122 56.0 2e-28 MLHAIEQVISSFPKKSFQSFTSDRGKEFACFQEVEQLGIFFYFADPYCAWQRGSNENSNG LLREFFPKKTNLAKVQTEELLQALLAMNHRPRKCLGFKTPFEALFHEISKIT >gi|224531373|gb|GG658179.1| GENE 305 322753 - 324297 1431 514 aa, chain + ## HITS:1 COG:FN0192 KEGG:ns NR:ns ## COG: FN0192 COG0747 # Protein_GI_number: 19703537 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 4 514 8 515 515 465 46.0 1e-130 MKKIVKSFILVFLLGIISIISYAKTETKQKVVDVIRMQGEDYGAPNPFKNSIRGPGKYKT DIIYDSLIEKDEKGFIPWLAKKWTIDNKDDSITFDLHTNVKWHDGKPLTAEDIKFTIEYY DKFPPVVDQTHDNGESIIRKIEILPNNKIKFTFKKYSPLNLERIGTVKIIPKHIWEKIDN PLAYTGEGYLVGSGPYKVIEYSSDKGSYAFEAFDDFWGMKPAAKRLEWIPISDPVLALER GEVSIISVSPNVIDRYKNNKKYGLVIENSFHTFRLVWNQKKVKEIQNKNVRKAIAYAINR ESLIDKLEKGYGHLSSPGYIVPSNPMYNANITKYPYSVKKAKELMKNKTIDATILVSNNP KEIKMAELIKIDLAKIGINLTVKSVDAKSRDNDVKNGNYEFALLKYGSMGGDADYVRNVY LSTAKSGIQRIQGYKNKELDDVLMAQLLEKDTKKRKELLHKAQEIIADELPMLPLYSEDF IYVYRKGDYSNYRKRFDNPVPLFTKLSFLIKEKK >gi|224531373|gb|GG658179.1| GENE 306 324301 - 325269 629 322 aa, chain + ## HITS:1 COG:FN0193 KEGG:ns NR:ns ## COG: FN0193 COG0601 # Protein_GI_number: 19703538 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 10 313 4 306 318 266 50.0 4e-71 MKISKKLVIRYFILFFIVISINFILPRLMKADPFLFLSSEGADDISGLSEKQIEQYYIYY GLDRPLWQQYLFYLKSIFTGNLGFSISKTLPVTTIIFSHITWTISIVLSSLTITIFLGIF LGIISAYNRENLFGKYTYLFFVTLSQIPPFLIGFGILVIGAFYIPSLPIAGGITPFLKFE WKYEVLLDILKHAILPTLTLIVVRFPHFFMLIRGKMIVEMSKRYAFIEKAKGFNDMYILC KHCLKNAITPLITEALLSIALILQGSLIVENVFKYPGIGRLLKEAVFARDYPLLQGIFLF MVCITLGISLISEIIKENEKIG >gi|224531373|gb|GG658179.1| GENE 307 325273 - 326073 554 266 aa, chain + ## HITS:1 COG:FN0194 KEGG:ns NR:ns ## COG: FN0194 COG1173 # Protein_GI_number: 19703539 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 13 265 12 265 274 258 52.0 1e-68 MKLKKLFCTIEIYVLLIFIIFAFFSKYISFQNINLETTDSLVAPNLEHILGTDDLGFDIF SQLVYGGKISLEISFFTAIFSAVGGSILGAFAGYFGGWRDKMILSIIDIFLSIPELPLMI VLGAFLGTNLKNIIFVLVLVTWTHPAKIARNEIIKLKNEKYILLSKAYGGSFFHIFRWHL LKPMWSIIITAIVKIMNKAILAEASLAYLGLGDPLSKSWGMIISRAMSFPNIYFTEYYKW WLLPPLVLLIILVVTLASLAQKLEKL >gi|224531373|gb|GG658179.1| GENE 308 326086 - 327762 367 558 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 309 554 10 265 329 145 33 2e-33 MKTILKLEDFYFTYKGNSKYTLNGINLDIKEGEALGIIGESGSGKTTLLLSILGLLFSKG NSLGKIYFDEQLLDKEEKYKILRWKDISMVFQNQLDVFNPKITVGEHIYELLDNLKRKEK YNRVKELFTMVRLDKKFIESYPNELSGGMRQKVLIATALSCNPKLILIDEPTTSLEEISK VEIIKILKNLIKNNITLIVASHDLEIIKELTEKIIVMDSGNIIETGITKKFLNLQKHPYS RALVQASPFINIFKDLWGINEVEDFKDMEGCPFYSKCPQRVPVCLNENPKLSKIDEESQV ACHLGGIINLLEVNKLSKTYISKKFKIDALSEVSLKIRMGEIVSIIGESGSGKSTLAEII SGIKEKTSGEVKFLNEEIGANILGSLNSIQIIFQDSSTAMNLELSIENILKEPFLLLKDK NSFPTKKMKEYLNNLGFPTSKEFLEKKAKNLSGGEMQRLSIVRALLLEPKLLIADEITSM LDPSRKANLLRVLKGLQNKYGFSMLFITHDLILAQKITDYFYVLKDGKIIEEGDGLKIFN RASHPYTKKLVSSIIYNM >gi|224531373|gb|GG658179.1| GENE 309 328021 - 328344 181 107 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 12 95 147 228 329 74 44 7e-12 MFFRENMIEYKKIGLRNEEEFLKKKKNELSGGQRQKVAIARALSMKPRLLLADEISSMLD DSSKVNIMRLLKKLQYDLGFSMLFITHDILLAKKLQIMSTVWRMEKL >gi|224531373|gb|GG658179.1| GENE 310 328393 - 328743 385 116 aa, chain + ## HITS:1 COG:FN0196 KEGG:ns NR:ns ## COG: FN0196 COG1695 # Protein_GI_number: 19703541 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 1 116 1 116 116 162 68.0 2e-40 MNINERSKFKHLTAFVLVILAERKYSPREIHDLLLREFPGFVRDMSTIYRCLSTMEKEGL LSIEWHLPEGGAAKKIYSITKEGWGALEEWKEDIEIRKNNFEVFLQKFSELSKEEK >gi|224531373|gb|GG658179.1| GENE 311 328747 - 329538 682 263 aa, chain + ## HITS:1 COG:FN0197 KEGG:ns NR:ns ## COG: FN0197 COG0500 # Protein_GI_number: 19703542 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 1 260 1 263 266 321 66.0 9e-88 MDIKEFEKMLDSKRHQGDMEKIWDHKSAWFFQKTEKSKENFKNRLVFRLVKNRKLLKGDS KLLDIGCGTGRHLLEFSNYTSYITGIDISSKMLEYAKEKLDKVPNVKLRHGNWMELFYKE KEYDLVFASMTPAISLIEHIERMCFISKKYCMMERFVFHRDSIREEIQEMLGRKLNRLHQ NEKEYSYAVWNIVWNLGYFPEIMYETEEYEEEKTIEEYLEQIECTKEEEKKIREFLRTKG KNGSIMSSHKLKKAVILWDVTKI >gi|224531373|gb|GG658179.1| GENE 312 329590 - 330138 764 182 aa, chain - ## HITS:1 COG:FN1078 KEGG:ns NR:ns ## COG: FN1078 COG2849 # Protein_GI_number: 19704413 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 182 1 181 181 205 67.0 3e-53 MNNQYNQDGKKEGLWVKLYDNGVVQEERNYVNGVREGVYKSYYANGQLEIIKNYKNGNLH GSYETFYNDGKISSRHALIDGRIIGKYEEFYPNGTLKSCSEYVGDSTTPVKTIKYFPNGE KKMEANLKKGFLFGAYKEYHSNGVVYKIATYGEKGRLEGSYQEFNAEGILIKECTYKNGQ EI >gi|224531373|gb|GG658179.1| GENE 313 330227 - 330502 512 91 aa, chain - ## HITS:1 COG:BH0558 KEGG:ns NR:ns ## COG: BH0558 COG1937 # Protein_GI_number: 15613121 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 6 82 16 99 100 69 47.0 1e-12 MKQCIDSHKVHARLKKIQGQVNGISNMIDQDIPCEDILIQINAVKSAIHKVGQIILEGHL DHCVRDAINEGKADEAIERFSKAVSYFANLK >gi|224531373|gb|GG658179.1| GENE 314 330662 - 330925 497 87 aa, chain + ## HITS:1 COG:FN0676 KEGG:ns NR:ns ## COG: FN0676 COG0234 # Protein_GI_number: 19704011 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Fusobacterium nucleatum # 1 86 1 89 90 62 43.0 2e-10 MKIKPLGKRILVQVKEKEEMTKSGIILSGVKDKETSNRGKIVAVSLEVEEVKIGMEVVFE KYAGTEIEDGEEKYLVLDMEQVLAVIE >gi|224531373|gb|GG658179.1| GENE 315 330936 - 332555 1554 539 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 539 3 547 547 603 57 1e-171 MAKLLKFNAEARNKLEEGMNTLADAVKITLGPRGRNVVLEKSYGAPLITNDGVSIAKEIE LEDPFENMGAQLLKEVAIKSNDVAGDGTTTATILAQSIVKEGLKMLSAGANPMFLKRGIE AASKEAVECLKKRAKKIASNSEIAQVASISAGDEEIGKLIAEAMQKVGETGVITVEEAKS LETTLEVVEGMQFDKGYVSPYMVTDAERMTAELENPFILVTDKKISSMKEILPILEKTVQ TSRPVLMIVDDLEGEALTTLVINKLRGTLNVVAVKAPAFGDRRKAMLQDISILTGATLIS EETGKRLEEMEIEDLGRAKTVKVTKDSTVIVDGAGSQDEIQIRVQQVKTQIEESNSEYDT EKLKERLAKLSGGVAVIRVGAATEVEMKERKLRIEDALNATRAAVEEGIVSGGGSILLQL VSDMKEYQMQGEEGMGVEIVKKAFEAPMKQIAENSGVNGGVVIEKIKNSPDGYGFDAKTE TYVDMMSAGILDPAKVTRSAIQNAASIASLILTTEVLVVNKKEEAMSGNPSSPMMNGMM >gi|224531373|gb|GG658179.1| GENE 316 332654 - 333373 1019 239 aa, chain + ## HITS:1 COG:no KEGG:FN0558 NR:ns ## KEGG: FN0558 # Name: not_defined # Def: TraT complement resistance protein precursor # Organism: F.nucleatum # Pathway: not_defined # 24 239 1 216 216 218 58.0 1e-55 MKNKKLIFVLLTTLLLVFSGCGALNTVVKKRNLDVQTKMSETIWLNPVSTNQKTVFVQIK NTSGKTVNIEDKIKNTLSQKGYYVVQDPNQASYWLQANVLKLDKVDLRESDPFGSGVLGA GVGATLGAYNTGSMNTAIGLGLAGALIAGTVDALVSDMAYTMVTDIMISEKTNSKVSVST NNNLTQGTRGRTKVTTSSESNRNQYQTRVVSVANQVNLKFEEAQPTLEAQLQQVIAGIF >gi|224531373|gb|GG658179.1| GENE 317 333541 - 335235 2544 564 aa, chain + ## HITS:1 COG:FN0559 KEGG:ns NR:ns ## COG: FN0559 COG1109 # Protein_GI_number: 19703894 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Fusobacterium nucleatum # 8 564 23 580 580 723 64.0 0 MELNWKLEYEKWLHSSLLSEDEKKELQAISSDEIELENRFYTDLSFGTAGMRGIRGIGRN RMNRYNVGKASQGLANYILKMTGEEGKKRGVAIAYDCRIDSEENAETTARVLAANGIKAY VFESLRSTPELSFATRELRAQAGVMITASHNPKEYNGYKVYWEDGAQIVEPQASGIVDSV NAVDVFQDVKTITLEEAKKQGLFCSIGKSIDDRFIEEVEKNAIHREISGKENFPIVYSPL HGTGRVAVQRVLKEMGFLNVHTVAEQELPDGTFPTCPYANPEDHSVFQLSLDLADKVGAK LCIANDPDADRTGIAFLDKEGKWYIPNGNQIGILLANYIFTNKKIPKNGAVISTIVSTPM LDPIAKAYGITLYRTLTGFKYIGEKIRQFEQKELDGVFLFGFEEAIGYLSGTHVRDKDAV VTSMLVAEMAAYYDAQGSSLYEELLKLYDKFGYYLEETIAITKKGKDGLEAIANTMKKLR EIKPTVLCGQKVLEIRDFNENYNGLPKSNVLQYVLEDGSQVTVRPSGTEPKIKYYICVSD KAEITAKEKLNQFKKSFQDYVNAL >gi|224531373|gb|GG658179.1| GENE 318 335219 - 336316 1131 365 aa, chain + ## HITS:1 COG:FN0560 KEGG:ns NR:ns ## COG: FN0560 COG0635 # Protein_GI_number: 19703895 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Fusobacterium nucleatum # 13 365 8 365 365 355 51.0 6e-98 MSMLYKVKADAVYIHIPFCLHKCEYCDFTSFSGKLNWKKRYLEALYQEISLYEHSYYDTI YFGGGTPSLLEGKEIAKILELLPHDEKTEITVECNPKTLNLKKLQDYFEIGVNRLSIGIQ SMNEKYLKMLGRLHTVQEAKEVFQMAREIGFQNISVDMMFALPTQTLEEVEEDIENFLCL DADHISIYSLIWEENTPFFQKLEKGIYQRTENDVEAEMYQKIIETMKENSYEHYEISNFA KSGYFSRHNQKYWQNQNYLGIGLGASGYLEEIRYSNDRDFEHYFSNVNKNRFPREEEEIL NGEMIEQYRYLLGFRQLNTWLTPSGKYKKICETLFEKSYLIKREEEYQITQKGLFFFNDM LEYFL >gi|224531373|gb|GG658179.1| GENE 319 336329 - 337009 854 226 aa, chain + ## HITS:1 COG:FN0561 KEGG:ns NR:ns ## COG: FN0561 COG0325 # Protein_GI_number: 19703896 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Fusobacterium nucleatum # 4 225 3 222 223 228 59.0 7e-60 MKQIEERIKEIYEEVKQYSPYPEKVKVIAVSKYLTAQEMLPYLETGIITLGENRVQVIQE KYEELSTYPFAKSLEWHFIGNLQKNKVKYIVDKVSMIHSVNKLSLAEEINKKMEALGKKM PVLIEVNVSGEESKEGYEVLEAEKDLPKLLNLKNISICGLMTMAPFTEDIEEQRRVFQKL RTLKEDWNEKYFQGSLTELSMGMSNDYKIALQEGATMIRLGRKIFY >gi|224531373|gb|GG658179.1| GENE 320 337021 - 337587 808 188 aa, chain + ## HITS:1 COG:FN0562 KEGG:ns NR:ns ## COG: FN0562 COG1799 # Protein_GI_number: 19703897 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 98 181 16 99 111 100 64.0 2e-21 MKENEGKKKGLFSTVNGLTSGMKELFGIDSVESDYEEEDTGILDFSTADEPMAEESAKTV KSSKNGKQKTFFGKAKSSQVMKEVFSNEDDGGINNCQTVFVDPKGFADAERIADYIVKDK MITINLEFLDTKVAQRLMDFLAGAMRVKESSFVAISKKVYTIVPKSMKVHYEGKKNQKKT ILEFEREE >gi|224531373|gb|GG658179.1| GENE 321 337591 - 338589 1319 332 aa, chain + ## HITS:1 COG:FN0563 KEGG:ns NR:ns ## COG: FN0563 COG0482 # Protein_GI_number: 19703898 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Fusobacterium nucleatum # 1 331 1 331 333 482 74.0 1e-136 MAKIKALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGVNEKAEYMAKQLGIQLEY IHFEKRHMEVVKDPVYGRGKNMNPCIDCHSLMFRIAGELLEKYGASFLISGEVLGQRPMS QNPQALEKVKKLSGVGDLILRPLSGKLLPPSLAETEGWIQREGLLDINGRGRSRQMELMA HYGLVDYPSPGGGCLLTDPAYSIRLKTLEEDGLLDHEYADLFSLIKISRFFRFEKGRYLF VGRDQISNEKIDEIRRNREGSFYIYSFETPGPHMIAFGELTEEEKNFSRNLFSRYSKAKG KLQIKLNVSGKIEELDPISVEEIEKEMKKYQL >gi|224531373|gb|GG658179.1| GENE 322 338657 - 339256 890 199 aa, chain + ## HITS:1 COG:FN0537 KEGG:ns NR:ns ## COG: FN0537 COG0344 # Protein_GI_number: 19703872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 199 1 194 194 175 53.0 4e-44 MKLLFFIIIAYFLGSLPSGVWIGKITKNIDIRNYGSKNSGATNAYRILGAKYGLMVLFAD ALKGFLAVALAAAGGLSPNAVSIVALVVILGHSLSFFLAFKGGKGVATSLGVFLFLEPKV TFLLIFIFIAVVFVSRYISLGSIIAAGLLPILTFWVEIGKEKTNWLLIFITLLLGAFVVY RHKSNIIRLLEGKENKFKL >gi|224531373|gb|GG658179.1| GENE 323 339268 - 340269 1431 333 aa, chain + ## HITS:1 COG:lin2050 KEGG:ns NR:ns ## COG: lin2050 COG0240 # Protein_GI_number: 16801116 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Listeria innocua # 2 331 4 334 338 293 45.0 3e-79 MEKVVVLGAGSWGTALSMVLAQNGHQVVLWEYQEELAQKLQKERENKKLLPGVIFPENLE VISESTNLLKDVKYVIFSIPSQALRSVVQKFSSQIQGDMILVNTAKGIEISSGMRLSEVM KDEILGKYHKNLVVLSGPTHAEEVSKGIPTTIVAAGEEDKAKQIQELFNNNNFRVYLNDD LIGVEIGAAIKNCLAIAAGALDGLGCGDNTKASLITRGIAEISRYGKCFGAKESTFSGLS GIGDLIVTAMSQHSRNRYVGEKLGRGEHIDDILSSMTMVAEGVPTVKAVYEQMKKQNISM PIVEAVYRVIYENMSAKEMMNELMNRSVKKEFY >gi|224531373|gb|GG658179.1| GENE 324 340295 - 341113 986 272 aa, chain + ## HITS:1 COG:SA1390 KEGG:ns NR:ns ## COG: SA1390 COG0568 # Protein_GI_number: 15927141 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Staphylococcus aureus N315 # 5 260 97 355 368 208 44.0 8e-54 MAERDLLSLYLKDIRQYRTLEKEEELDLVIKAQSGDEEAKNQLILCNLRLVVNVAKGYRS KGMNLIDLISEGNLGLIRAIEKFDVGKGFRFSTYAVWWIKQSISKAIIFKGREIRIPSYR YDILNKINKYVTETVKLCGIYPTVEEVAEYLKMPVNKVEEVMIEFQEPMSLSTEIGEDIY LEDTLSGAEEHFEEKVYYKMMQQRLKDILSRLESREQEILKLRFGLDGYEIHTLEDIGKN FNITRERVRQIEKNTLKKLKRKYTKELRETLL >gi|224531373|gb|GG658179.1| GENE 325 341129 - 342250 1127 373 aa, chain + ## HITS:1 COG:FN0536 KEGG:ns NR:ns ## COG: FN0536 COG0592 # Protein_GI_number: 19703871 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Fusobacterium nucleatum # 1 373 1 381 381 305 45.0 9e-83 MQVIVNRTEFLKKLRIVEKAISENKIKPILSCVYMETRGEMLFLCGTNLETTITTTVSCK QVIEEGKVAFQYPLIDEYMKELKEEEVQIRMAGDSLMVEGGDAVSEFSTFSSEDYPKAFE NFMQQEKEVLLRMNSIELASIFDKLKFSAGNTDNPAIHCVRIEGRDGEIHFVTTDTYRLT YLHKEFLLPEDFQMSLPLEAVEACSKIFRGLEADVKLYFDKKFAHFEIEDIHIMSSLIEL NFPAYQAILSNGNYDKTMGISTENLLSILRRVIIFVRNNEESKYGATFHLSDGLLKIKGN SDIAKINEEMIVDYQGAPLKVSLNTKYLFDFVQNLEKDTELSVEMLSSKTSVKVHEKGKE DYIYILMPLALKD >gi|224531373|gb|GG658179.1| GENE 326 342328 - 343257 616 309 aa, chain + ## HITS:1 COG:FN0571 KEGG:ns NR:ns ## COG: FN0571 COG0758 # Protein_GI_number: 19703906 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Fusobacterium nucleatum # 3 309 2 304 304 248 47.0 8e-66 MEYTKREFLFLSWINTKEPFLHSTFLYRLIKQSILENKNLFRISEEELFQFICEEQLYTR KEYEKVLILIEDFFREEIQEEISNIETICKKEEIEMIPYGEENYPFPLKNIRNSPYVLYL KGKLPQTEILKKSVALVGSRDCSEEGKNFAKKVAQYLKKNKIYNISGLAKGIDSIGHLET LGQTGAILGQGLAREIYPRENQILASRILNMGGFLLSELPPLTPVSMEHLIARNRLQSAL TSGIIIAESALQGGTLHTFRFAREQGKKIYVASLNQKFIQKYHKDIIILENISDFEKKKR ENRQQKTLF >gi|224531373|gb|GG658179.1| GENE 327 343279 - 343818 392 179 aa, chain + ## HITS:1 COG:FN0578 KEGG:ns NR:ns ## COG: FN0578 COG0514 # Protein_GI_number: 19703913 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Fusobacterium nucleatum # 1 168 9 176 614 206 54.0 2e-53 MEKEAKRLLQEIYGYRDFRKGQKAILESVFQGREVLGILTTGGGKSICYQIPALLFEGLT LVISPLISLMKDQVDTLKMIGVKSAFLNSTLKKEEYRRLVGKIFRGEIKILYVAPERLCN ESFISLMQKIKISLLAVDEAHCISQWGHDFRKSYLEIPTFLKKIKTKSTNFSFDSYSNS >gi|224531373|gb|GG658179.1| GENE 328 343796 - 345061 1201 421 aa, chain + ## HITS:1 COG:FN0578 KEGG:ns NR:ns ## COG: FN0578 COG0514 # Protein_GI_number: 19703913 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Fusobacterium nucleatum # 2 415 184 606 614 472 55.0 1e-133 MTATATPRVQEDILDKLHIPDAYIYQGSFNRKNLYFRVERRKVPEAYVADYLKKSQGESG IVYCSTRKSVDSMYSYLKEIRGYSVGKYHGGMEKEEREESQNNFLMDKIQVMVATNAFGM GIDKSNVRFVIHANLPGDLESYYQEAGRAGRDGGRAEAILLYQEEDISTQRFFIEKNEEI DEDFKREKLHKLDKMIEYAELESCYREFILSYFGEARVKNYCGFCGNCRKQTDVQDLSVE AQKVLSCIGRAKESIGQSTVTNILLGKADSKMKLKGLDRLSTFGIMEKKEIPWLEDFIHY LLSEGYISQTAGSFPVLKLNTQSWDILQNRRKVLRKEEEEVRFSMQRNPLFRKLLRLRLE ISEREKVAPYIIFSDLTLWEFAQFRPKTKYEMMKIQGVGNQKFTHYGEEFLHCILEEEEL R >gi|224531373|gb|GG658179.1| GENE 329 345058 - 346227 1578 389 aa, chain + ## HITS:1 COG:FN0581 KEGG:ns NR:ns ## COG: FN0581 COG4591 # Protein_GI_number: 19703916 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Fusobacterium nucleatum # 1 389 1 389 389 408 60.0 1e-114 MIEFFIAKKHIVERKKQSFISMLGVFIGVTVLTVSIGISNGLDKNMIQSILSLTSHILVS DSTNQEIVDYEELSEKINQIKGVKGSIPMISTQAIIKYHGVFGNYTSGVKVEAYDLEKAE KALELSSMIKEGKIDIEKKNGIYVGKELADSTGMKIGDEITMVSAENTEIPLQIAGVFQS GFYDYDVNLVLLPLEMAQYMSYRGQVVDKINVRLQNPYDAPRVADEISQNLSMMTMTWGN MNRNLLSALSLEKTVMILVFSLIVIIAGFVVWVTLNTLVREKVKDIGILRSMGFSQKNIM GIFLIQGLILGVVGIILGICVSLGILWYLKNYSLAFITSIYYLTKIPIEISGKEIAVIVG ANLGIIFISSIFPAYRASKMESVEALRHE >gi|224531373|gb|GG658179.1| GENE 330 346220 - 346903 241 227 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 226 7 223 318 97 31 8e-19 MNKFILELKHLEKYYQETGTKLHIIRDLSFNIEKGEFVTILGRSGSGKSTLLNLIGLLDR ADAGEIILGGKLLSSMNEIEKNKLRNEFLGFVFQFHYLLPEFTALENVMLPAMLAKKLKK EEIEKRAIELLISVGLGERLQHKPNQLSGGEKQRVAIARALINQPKLLLADEPTGNLDEE TSETIFKIFKEINEKYGQTIIVVTHSRELAKISSRQIYLKKGMLEEI >gi|224531373|gb|GG658179.1| GENE 331 346980 - 347522 508 180 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|34763431|ref|ZP_00144379.1| PROBABLE SIGMA(54) MODULATION PROTEIN; SSU ribosomal protein S30P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 1 176 1 179 181 200 58 9e-50 MKLSIQGKRLELTDAIKAYAERKFEKVEKFHDGILEINVTLSAVKLKTGNYHSAEVLAYL SGKTLKATSTEEDLYFAIDQAADALEIQLKKHKDKNKRANSQKRGKSWKFDPESGVVTNQ EERRMVKVLLPKKPMSMEEALLQLEVLEKQFFAFKSLETGKMSIVYKRKDGDYGYIVEEA >gi|224531373|gb|GG658179.1| GENE 332 347599 - 348795 1493 398 aa, chain + ## HITS:1 COG:FN1063 KEGG:ns NR:ns ## COG: FN1063 COG1473 # Protein_GI_number: 19704398 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 1 393 1 393 394 598 72.0 1e-171 MEVMEEVKLIHSDMIRWRRDLHQIPELNLELPKTVKYVTKELDKMGIVYTTLVNGNAVVA VIRGEKGEGKTIGLRADMDALPIPEETGLEFASKNGCMHACGHDGHTAMLLGAAKYFSTH RKEFRGNVKLLFQPGEEYPGGALPMIEEGAMENPHVDAVMGLHEGIISEEVPVGSIGYRD SCMMASMDRFLIKIIGKGCHGAYPQMGVDPILLASEVVLALQGIVSREIKATEPAIVSVC RIQGGYCQNIIPDVVELEGTVRATNESTRKFLAERIESIVKNITAAARGSYELEYDFKYP VVMNDKKFTQEFLKSARKVLKEEQIYQMEAPVLGGEDMAYFLQKAPGTFFFLSNPKRYAD GTIYPHHNPKFDIDEECFVLGAALFVQTALDFLNKEEE >gi|224531373|gb|GG658179.1| GENE 333 348798 - 349574 1230 258 aa, chain + ## HITS:1 COG:no KEGG:FN1064 NR:ns ## KEGG: FN1064 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 5 254 1 250 253 356 79.0 5e-97 MRDGIRNIKLHILALILVVIAEWIGVFKFQLGKGIIALFPMLYALIFGIVAKFVKASSEK DMKDAGSLVGITLMLLMAKYGTTIGPTLPKIISASPALILQELGNIGTVLLGVPVAIALG LHREAIGGAHSIAREPNIAVIADRFGLDSEEGEGVLGVYIVGTVFGTIFIGLLASLLASY TPLHPYSLAMASGVGSASMMTASVGALSTLYPDMAETLAAFGATSNMLSGLDGVYMSIWI SLPLAEWLYKKLQKREVK >gi|224531373|gb|GG658179.1| GENE 334 349576 - 350037 822 153 aa, chain + ## HITS:1 COG:no KEGG:FN1065 NR:ns ## KEGG: FN1065 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 23 153 1 131 131 153 75.0 2e-36 MARNMTNVKESLAGLCITAFITLIGNFFATKISPIEALPGILILVAIAIIGITLAEILPI KIPAVAYVVTLSTILTIPGFPMAELLSAQTGKINFLALCTPILAYAGIYTGKNLEGLKKT GWRIFVLAIFVMLGTYLGSAIIAQVILKMLGQI >gi|224531373|gb|GG658179.1| GENE 335 350109 - 350873 957 254 aa, chain - ## HITS:1 COG:CAC1512 KEGG:ns NR:ns ## COG: CAC1512 COG2116 # Protein_GI_number: 15894790 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Clostridium acetobutylicum # 1 248 1 247 256 203 47.0 2e-52 MYDEVIGKLTEAAKKKVNLLNSSTFKYLVSSAFAGAFIGIGILLIFTIGGYMGGEPSVKV VMGLSFSVALSLVIFSGTDLFTGNNLVMTVGVLNKGVKTSDLIRVWIVSYIGNLLGAILL SFLFVNSGLVDKGPVMEFFQKMALAKANPDAISLIFRGILCNIMVCLAVFLSFKVQDETT KIILIIMCLFVFITVGFEHSIANMTVYAVGLFSSSMTEVTLGQAIYNLATVTLGNIIGGA FFIGCGVFSLRSKS >gi|224531373|gb|GG658179.1| GENE 336 350901 - 351878 1380 325 aa, chain - ## HITS:1 COG:CAC1515 KEGG:ns NR:ns ## COG: CAC1515 COG2221 # Protein_GI_number: 15894793 # Func_class: C Energy production and conversion # Function: Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits # Organism: Clostridium acetobutylicum # 4 322 2 320 320 462 66.0 1e-130 MLRDINTKKVMKNAYRITKHKYKTALRVRVPGGLIDPDSLMIISKISTEYGDGQIHITTR QGFEILGIDMENMPEVNQLIQPVIEKMGINQEIKGSGYGAAGTRNIAACIGNKVCPKAQY NTTNFAKRIEQAIFPHDLHFKVALTGCPNDCIKARMHDFGIIGTCLPEYEMDRCVNCGAC VKKCKRMSVGALREENNKIIRNEEKCIGCGECVLNCPMSAWTRSPKKYYKLMLLGRTGKK NPRLAEDWLKWVDEDSIVKIIQNTYQYVKEYIDPKAPGGKEHIGYIVDRTGFQEFRKWAL KDVNLPEETVENKNIYWSGPNYCSF >gi|224531373|gb|GG658179.1| GENE 337 351888 - 352691 971 267 aa, chain - ## HITS:1 COG:CAC1514 KEGG:ns NR:ns ## COG: CAC1514 COG0543 # Protein_GI_number: 15894792 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Clostridium acetobutylicum # 6 267 4 264 264 335 58.0 4e-92 MCKCSNPYIPFSAEIIEIVKHTEIEWTFRAKLDSSSVKPGQFYEISLPKYGESPISVSGI GENFVDFTIRNVGKVTKELFEFQVGDFFLVRGPYGNGFEIENYKGRDLVIVAGGSGLAPV RGIIEYVYAHKEEFTSFQLIVGFKSPKDILFKQDLEKWSKTLNILVTVDGAEEGYQGATG LVTKYIPKLQFQDIQKVSSVVVGPPMMMKFSVAEFLKLGMLEKNIWVSYERKMHCGVGKC GHCKMDATYICLDGPVFDYEFAKNLVD >gi|224531373|gb|GG658179.1| GENE 338 352719 - 353726 947 335 aa, chain - ## HITS:1 COG:CAC1513 KEGG:ns NR:ns ## COG: CAC1513 COG1145 # Protein_GI_number: 15894791 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Clostridium acetobutylicum # 1 331 1 333 338 362 53.0 1e-100 MKLRLSVEEFDKGLEKLSKEFKIFAPKSFQDRGTYSDTDIVKYDVVNHFDEMVWDRKSNF SPKETILPINQVLFYFTEKEFSESKEEEKKILVFLRACDLNAVKRIDQIYLANGASKDTF YARRREKVKFVVVGCTESYRNCFCVSMGSNTVDNYDAAMNIRNNEIYLEIQDDSLAVFEG EKTDFNIDFVKENKFSIEVPENIDFMHLQSHSMWDEYDTRCIACGRCNFTCPTCTCFSMQ DIYYRENQNVGERRRVWASCQVDGYTRIAGGHSFRNKQGQRMRFKTLHKIHDFKKRFGYN MCVGCGRCDDACPQYISFSEAITKMKNAMDEKNKV >gi|224531373|gb|GG658179.1| GENE 339 353822 - 354508 558 228 aa, chain - ## HITS:1 COG:CAC1511 KEGG:ns NR:ns ## COG: CAC1511 COG0664 # Protein_GI_number: 15894789 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 6 227 5 226 228 117 32.0 3e-26 MEVSLEEIKKIEVFHGITKKSIEKIQKTAEIISLPQNKYLYTDKQNLDYIYFVLSGKVVI SKGNEHGESRIIFLLSSGAMINQPFMRNNTSAIECIAFENSRILRITFSDFATILSQDYK LCKNCMIFMENRIRRLYRQLKNSVSINLDKKLAAKLYRLGIEHGSSSQEEGMTKINLNIT ITCLAKMLGCQRESLSRAMKSLNSRKIVKMIGRSIYVDMEAAKNLFKN >gi|224531373|gb|GG658179.1| GENE 340 354525 - 355604 786 359 aa, chain - ## HITS:1 COG:FN0992 KEGG:ns NR:ns ## COG: FN0992 COG0859 # Protein_GI_number: 19704327 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 3 355 4 354 358 347 53.0 2e-95 MKQNDPIKILVIRFKRIGDAILASPVCNSLKKTFPNSSIDYVLYEPSAPLFTNHPYIDNV ICISKKEQENPFLYLKRVWKITRNKYDIIIDIMSTPKSEVFTLFSLGTPYRIGRVSKNKK RGYTYNYKQYEPQNTKNKVDKFLKQLLSPLEKDFKLTYDPELILSVSEEEKKEMKQKMER IGLSLEKPIIPFAVLSRVAGKTYPIENMKKIIQYCLDHYEAQFVFFYSSDQKAQIKEIEK DLNFPKNIFTNLETRDMRELMAFFANSTCYIGNEGGPRHLAQALGLPCFALFNPSAEKKE WLPWPSDTNVGIEPKDTLSFHQISQEKYNSLTKEEAFALMTVPFIIEKLDIFLSKVLGK >gi|224531373|gb|GG658179.1| GENE 341 355591 - 356358 967 255 aa, chain - ## HITS:1 COG:FN0991 KEGG:ns NR:ns ## COG: FN0991 COG1183 # Protein_GI_number: 19704326 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Fusobacterium nucleatum # 1 255 1 257 261 331 71.0 9e-91 MVKKKYIAPNVITAGNMFLGYISITESIKGHFIPAIWFIILAMVCDGLDGKTARKLDAFS EFGKEFDSFCDAISFGLAPSILVYSILNQVAPGSLFIIPVSFLYALCGVMRLVKFNIITV ASSEKGDFSGMPIPNGASMVCSYYLICHTIYQNFQISFFDINVFIAIIVLAAALMVSTVP FKTPDKTFSFIPKNKTLISFLIILIIATLKYSLFIVSFTYVLLNLLTFFTKKFVGEHQDQ LDEFFEVVEEEDETK >gi|224531373|gb|GG658179.1| GENE 342 356493 - 357719 1548 408 aa, chain + ## HITS:1 COG:no KEGG:FN0173 NR:ns ## KEGG: FN0173 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 35 399 1 430 461 143 29.0 2e-32 MRKFIMFLGIFLLVSIVGIFFGRNMILKYVLEDRLGQINQAYVKIGSVESNFFEKYISLR DVQVESHEKAGTDFIRIQQVKTYYDLDYNHKKVELFDTEVIGLEFITPKDEEDMRALREA KAVEVVSGQYPFAKVFQEESEKEEHQASFGVKSSDEYQKIKDAVQDMKNGGNGIHHNLNT IRENIEKLREKYVKPEPVEEPKSIISLDRMLGKYLTLMYEDEIYNLLLRYREIVKEMEER VRRDVERRDDIWEIQMNRVSIFFDIYGINFNGEIKNFNSRLSKNYDNISFKLFGEKDDTI GMIKGELNLLKLDLNATLDIPELNLIGVTEFRKYLSDGVASLQQDIQMDKYDVALQGVLT AKRMKLVENPLLEKIQDLEIRYQYNSRDRQLYLNTHFLKNKIDEMKNN >gi|224531373|gb|GG658179.1| GENE 343 357909 - 360062 2458 717 aa, chain + ## HITS:1 COG:FN0592 KEGG:ns NR:ns ## COG: FN0592 COG0210 # Protein_GI_number: 19703927 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Fusobacterium nucleatum # 1 716 1 735 735 764 58.0 0 MSLLEKLNDKQREAAATVEGPLLILAGAGSGKTRTITYRIAHMIEELGIPPYLILAVTFT NKAAKEMKERVISLIGEEAERATISTFHSFGVRLLRMYGSKLGYQANFTIYDVEDQKRII KGIMKELNLQNTDLSEKKLASLISKLKEEGVSADDYEKDAYEYEAKTIAEIYRRYNIKLK NQNGIDFSDILLNTKNLLEIPEILEKIQTKYQYIMVDEYQDTNNIQYQIVNKIAQKHRNI CVVGDENQSIYGFRGANIQNILNFEKDYKDAMVVKLEQNYRSTAIILDAANAVIRHNTSS KNKNLWTDKKEGDKIKVFKALNQRDEVEKVISEIAKEKQKGRAYRDMTILYRTNAQSRVF EEAFLRYRIPYKIFGGMQFYQRAEIKDILAYLSLINNPLDETNLLRIINVPKRKIGDKSI EKIRFFAREQGLTLLDSLARAGEISGIGSGLAVTIQQFYTLIRELMDLAPYENTSIIFSS LLEKIGYKQYLETAYEDAEVRISNIEELGASILELENLLGNLSLRDYLENVSLVSATDDL QENQDYVKLMTIHNAKGLEFPVVFLVGVENETFPGNSKFSSEDDLEEERRLCYVAITRAE ERLVISFSTTKYVYGEVQASQESIFLKEIPSEYKLEDWKEERPKYQKLQTKNTISTEDLK KKTSNLPFSVGERVLHKKFGLGIVRDLEEKKIIVEFVTGKKEIAAIVAEKFLSKAES >gi|224531373|gb|GG658179.1| GENE 344 360078 - 360905 976 275 aa, chain + ## HITS:1 COG:FN0593 KEGG:ns NR:ns ## COG: FN0593 COG0774 # Protein_GI_number: 19703928 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Fusobacterium nucleatum # 1 275 7 282 283 387 71.0 1e-107 MKRRTIAKEIEYSGIGLHKGETIFMRLLPSNTGKIIFRRVDLEKGKNEIVLDIDNTFDLT RGTNLKNGFGAMVFTIEHFLSALAMVNITDLIVELNGNELPICDGSAKVFLELFENAGTR DLEEEVEEIIIKEPLYLSLGDKHIVALPSEEYKLTYSIRFEHSFLKSQTAEFILDYETYR KEIAPARTFGFDYEIEYLRKNNLALGGTLENAIVVQKDGVMNPGGLRFEDEFVRHKMLDI IGDFKILNRPIKAHIIAIKAGHALDIEFAKKLREI >gi|224531373|gb|GG658179.1| GENE 345 360918 - 361343 697 141 aa, chain + ## HITS:1 COG:FN0594 KEGG:ns NR:ns ## COG: FN0594 COG0764 # Protein_GI_number: 19703929 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Fusobacterium nucleatum # 1 140 1 140 141 211 74.0 3e-55 MLNTLEIMERIPHRYPFLLVDRILEMDVENKRVIGRKNVTINEEFFNGHFPEHPIMPGVL IVEGMAQCLGVLVMEGQEGKVPYFAAVENVKFKQPVRPGDTITYDVKVEKIRSNIVKASG VALVDEVKVAEASFTFCIADK >gi|224531373|gb|GG658179.1| GENE 346 361359 - 362132 1334 257 aa, chain + ## HITS:1 COG:FN0595 KEGG:ns NR:ns ## COG: FN0595 COG1043 # Protein_GI_number: 19703930 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Fusobacterium nucleatum # 1 257 1 257 257 421 80.0 1e-118 MVEIHSTAIVEEGAILEDGVKIGPYCIVGKDVKIGKNTVLQSHVVVEGITEIGEENTIYS FVSIGKASQDLKYRGEPTKTIIGNKNSIREFVTIHRGTDDRWETRIGSGNLLMAYVHIAH DVIVGDGCILANNVTLAGHVVVDSHAIIGGLTPVHQFTHIGSYVMVGGASAINQDICPFV LAEGNKAVVRGLNTVGLRRRGFSDEELSNLKKVYRIIFRKGLPLKEALAEAEEQFGSDKN VAYLLEFIRNSERGIAR >gi|224531373|gb|GG658179.1| GENE 347 362132 - 362935 910 267 aa, chain + ## HITS:1 COG:FN0596 KEGG:ns NR:ns ## COG: FN0596 COG3494 # Protein_GI_number: 19703931 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 267 1 267 267 311 56.0 7e-85 MEKIGIIVGNGKFPLYFMKEAKSQGYDLYPVGLFDSIEEEIKNMEHYRSFHIGHIGEIVK HFSFCGIKKLILLGKVEKSLLFQNLDLDYYGQEIMKMLPDKKDETLLFAVISFLKLNGIK VLSQNYLLSSFMVEEICYTEKKPEKEDHKTIQLGVEAAKMLTKLDIGQTVIVKEEAVVAL EGMEGTDKTILRAGELAGKGCIIVKMARPKQDMRVDIPTVGVETVKKAIEIGAKGIVMEA KKMFFLEREEAISLANQYGIFLIGKKV >gi|224531373|gb|GG658179.1| GENE 348 362946 - 364019 1341 357 aa, chain + ## HITS:1 COG:FN0597 KEGG:ns NR:ns ## COG: FN0597 COG0763 # Protein_GI_number: 19703932 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Fusobacterium nucleatum # 1 357 1 356 356 375 52.0 1e-104 MKIFVSTGEVSGDLHLSYLAKVIRKKYPDCELYGVAGLHSREAGVTVIQDIQELAIMGFL EAFKKYSFLKEKMESYLQFIEKEKIEKVLLIDYGGFHLKFLKALKERCPDVKVNYYIPPK LWVWGKKRIQSLRLADEIMVIFPWEVDFYQKEGVKVHYFGNPLVETCPPRKQSGDKILLL PGSRKQEILSVMDIYYDLILRNPKQEFLLKLSNEEAFSFLPKEMKDLPNVEIIFGKDLGE IVKKCSYAVAVSGTVTLELALFDVPSIVVYRTSFLNYFIAKYLLKVGYISLPNITLGEEV FPELIQKDCEVKNIEQYLEKIKQNPASWKKKLESVRESLSGENIIENYADFLVEGEK >gi|224531373|gb|GG658179.1| GENE 349 364016 - 365785 260 589 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 350 571 135 355 398 104 31 5e-21 MKKLSWNPLKNKSLSTFLHYSMQYKWKMFAIVILSALASAMSAIPAWLSKYLIDDVLVKQ EKNMLFLVLAGMFFCTLIKVLAVYYADIGSGYITEVIKRDIKVDIFKHLQKLPLHYYKKN KLGDIMARLSGDTSTLGRMGFIIFEMFKEFLTTFVLIIRMFQVDYILALISLIVLPLILQ IVRKYTKKIRKSGRVRQDTAGAITAFTQESLSGIFVVKAFNAMKIMISKYEEISYDEFQK SFKTAKIKAKVSPINELITTLMIVLVALYGGYKIIVTKDITSGDLVSFVTALGLMQQPLK RLVAKNNELQESIPSADRVLEILEENIEKEYTGEEKHLDGRIESIEIENVSFVYPDTTEN VLEDISLSIKSGEVVALVGKSGSGKSTLVNLIARFYETVSGKILINGVDSQTIPLEEFRN YIGVVPQESFLFSGSIAENIAFGKERVTQEEIEKAAKMANAYDFIMELPEQFETEVGERG TRLSGGQKQRIAIARALIQNPQIMILDEATSALDTESEKLVQEALDELMKGRTTFVIAHR LSTIIHADKIVVMEDGKIREVGNHTELLEKKGLYEHLYHIQFQEKMEEK >gi|224531373|gb|GG658179.1| GENE 350 365785 - 366534 1056 249 aa, chain + ## HITS:1 COG:FN1851_1 KEGG:ns NR:ns ## COG: FN1851_1 COG0689 # Protein_GI_number: 19705156 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Fusobacterium nucleatum # 1 240 1 240 242 307 68.0 1e-83 MERIDGRKENQLREIKITRDFNIHAEGSVLIESGNTKVICTASVSEKVPSFIKNTGKGWL TAEYSMIPRATGERNQREAAKGKLSGRTMEIQRLIGRALRSSIDLEKLGERTITLDCDVI QADGGTRTASITGAFVAMAIAAAKLLREGTITESPVLSSVAAVSVGKCEGNIFLDLNYVE DSSAEVDMNVIQNDLGEYIEVQGTGEEATFCRKELNALLDMAEIGIHQLLEKQREVLGED YEIIFSNRK >gi|224531373|gb|GG658179.1| GENE 351 366506 - 367090 321 194 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|162456259|ref|YP_001618626.1| putative ribosomal protein [Sorangium cellulosum 'So ce 56'] # 1 185 6 197 207 128 41 4e-28 MKLFLATGNKHKIEEIKAIFHENEVEIFSILDGISIPEVVEDGKTFEENSQKKALEIAKY LNMMTVADDSGLCVDALGGAPGVYSARYSEEGTDEANNQKLIQNLKGIDNRKARFVSVIS FAKPDGEVFSFRGEVEGEIVDDRRGEFGFGYDPYFYVKEYGKTLAEMPEVKNQISHRANA LKKFQEFWRQKKSF >gi|224531373|gb|GG658179.1| GENE 352 367104 - 367952 838 282 aa, chain + ## HITS:1 COG:CAC1850 KEGG:ns NR:ns ## COG: CAC1850 COG1737 # Protein_GI_number: 15895125 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 12 263 16 267 293 115 26.0 9e-26 MDKISKFYMEHYKTLTKGEKKIAEYIVKNPKQVLLLSALELGKEIGVSDASILRFSKALG FVKFTEFRNYIALELREANPADRIVKHWDNFQSNSDIVNKIVNADLKNIKEFLMNIDFEA VNELVSWINHSRKIYILGIGSSRAISQFLFWHIKRLGFDTECVNEGGLGLYEIFSHINER DLVILFTFPRFLQDEVRALSLAKEKKAKIVAITSNLFSEISYLSDMVFKLSCENEGFFNS YIVPMELCNIILTALFEQNKEKIYSEMKKNTEMKDFLFTNEK >gi|224531373|gb|GG658179.1| GENE 353 368186 - 368914 747 242 aa, chain + ## HITS:1 COG:FN0505 KEGG:ns NR:ns ## COG: FN0505 COG2071 # Protein_GI_number: 19703840 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Fusobacterium nucleatum # 2 236 3 237 243 211 43.0 1e-54 MKKPIIGITSAYEKEEGLRNYHRTTVSIDYTKAVVKGGGIPLVIPVTEDREIIKDQIALL DGLLLSGGTDLNPFLYGEDFKNGIHLVSPERDAYEWILLEEFLKTGKPILGVCRGHQLLN VYFKGSLYQDLKYYSSEVIQHRQEMYPELATHTVNIIDRDNILFELYGEKIFTNSFHHQI INRLGENLTVIATTNDGVIEAFQKKSHKFLYGIQWHPEMMTARGNTEMQKIFEKFVSYCM KE >gi|224531373|gb|GG658179.1| GENE 354 368942 - 370498 1838 518 aa, chain + ## HITS:1 COG:FN0470 KEGG:ns NR:ns ## COG: FN0470 COG2978 # Protein_GI_number: 19703805 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Fusobacterium nucleatum # 1 511 1 502 512 351 40.0 2e-96 MANETEFSRKGFLGKVAAISNRLPHPVTIFIILSVVVAFLSVIFSQMGVQVEIEAINRST KEVELQTFQVRNLLNAEGIRWIFESAVENFISFEPLGVVLFFSLFFNFLNEVGLFPSFLK KSMQKIKGRYVSFFIAFLGVNSSFAGDIGYVLVIPIAGIIYKQLKRNPIAGIILGFSSTS AGFAACLVSIDALLGGLSTSAMSIVNPDYIVTPLANSIFMFFFTFFITFIIAFINDRFIE PQLEGMTLEEEISETEENNFSILTEEENKGLRAAGLGFLVSLAIILILSVPSWAPLRNPN TGKLLLGWSPLLSAIVPVICFIFFVPGLFYGIATKKIRNDKDLMTFLFKSLDGFGAFIVL CFFSSIFISWFSYSQLGIIIAAEGGKFLSGIGLSRLPLIIAFVLFCSFANLFIGSMTSKY VLLAPIFLPMLYKMGISPELAQLAYRIGDSSTNVVSPLMSYFALILIYCNKYNKKFGMGD LITYMIPHAIVILISSLIFLGIWVTFDLPIGFGTVNFL >gi|224531373|gb|GG658179.1| GENE 355 370681 - 372423 183 580 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 344 552 14 227 245 75 25 4e-12 MIEKQLYHFCGETEKYIKDSVFLSCYRLLAGIGFSFLFAKLLTDILEANWTTNLFLVIGG MIVIILIKQWCMRMVASKLGFLVSEVKENLRKAIYQKVLRLGISYQESFQTQEVIHLAVD GVEQLENYFGGYLTQFYYCFASSLILFCVIAPWNLKAALVLLIMACSIPLTLQLLLKIVK KVQKKYWSKYASVGNLFLDSLQGLTTLKVYGTDGKREEEIADLSEGFRKQTMKVLKMQLS SIAVINWIAYGGTVAAIIISILAYRRGDLGLFGLLFIFMLAPEFFIPMRTLTAQFHVAMT GVAAAENMMNFLQKEEEKSLGEEIYQKGSQIHVKNLVYHYQDGTKALDGLNLDLESGKLT AIVGHSGCGKSTFASLLSGEMQVGVHQIFVGDTDIRSLKAGEITKHILRITHDGHIFSGT VKENLLMGNPEASEEMMIEALEKVSMWKFLQEKDGLNTVLLSQGKNVSGGQAQRLSLARA LLHNAEIYIFDEANSNVDIESEEIILSVIYELAKTKTVVYISHRLPSIRKADTIYVMRKG KVVQSGNHESLYAEEGLYQSMYREQEDLENFQKGGSHETK >gi|224531373|gb|GG658179.1| GENE 356 372410 - 374104 204 564 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 365 564 36 241 329 83 30 2e-14 MKQNRRSAARIMFQLVGLLKPLWGIMSIAVATGVIGFLFSFGISMFGAYAILKSLDWGNL SKVPFGTWSLHAYFIAMAICAFFRGLLHYIEQYCNHFIAFHILAEIRVRLFKVMRRLAPA KMDGENQGNLISMITGDIELLEVFYAHTVSPILIACVTTIFLFLYYLGLHWIYAIYALLG QIFVGILVPWIASRKASTVGMKVRNEIGNLNGEFLDKLRGLREVVQYRRGKEMVARISSL TDHLCEGQRELRNQMALVQVWTDSAIIFVSLFQLILSVFLVSSGMVGMEAAILAGVLQVG SFAPYINLANLGNILSQTFACGERVLSLMEEKPAVEDSENAEEISMGNLRVDNLHFEYRN GRQQQVLKGVNLEIKPGEIVGIMGPSGCGKSTLLKLMMRFWDADAGTISLGGKNIKEAKR SSLYSHYNYMTQSTSLFTGTIQDNLLVAKPEASEEEIMEALKKASFYDYVMSLPDKLQTV VEEGGKNFSGGERQRIGLARCFLADRSIFFLDEPTSNLDVQNEAIILKSLMQERKDKTVI LVSHRLSTLGVCDRILKMEQGQLV >gi|224531373|gb|GG658179.1| GENE 357 374286 - 375794 2008 502 aa, chain + ## HITS:1 COG:XF2742 KEGG:ns NR:ns ## COG: XF2742 COG0286 # Protein_GI_number: 15839331 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Xylella fastidiosa 9a5c # 9 474 16 491 519 534 51.0 1e-151 MAKKSNVKIGFEKEIWDAACVLWGHIPAADYRKVIVGLIFLRYISSSFEKKYKELLEEGY GFEDDRDAYMEDNIFFVPKEARWSTISAATHTAEIGMVIDNAMRAIEAENKTLKNVLPKI YASPDLDKRVLGEVVDLFTNNINMEDTEESKDLLGRTYEYCIAQFAAYEGTKGGEFYTPS SIVKTIVEILKPFDNCRVYDPCCGSGGMFVQSVKFLQAHSGNRNHISVFGQESNADTWKM AKMNMAIRGIDANFGPYQADTFFNDLHSTLKADFIMANPPFNLSNWGQDKLQDDVRWKYG LPPAGNANYAWIQHMVHHLAPNGKIGLVLANGALSTQTSGEGNIRKAIIEDDLIEGIVAM PTQLFYSVTIPVTLWFISKNKKQKGKTLFIDARNMGFMVDRKHRDFTEEDIQKLANTFTH FQEGILEDEKGFCAVVETEEIRKQDYILTPGRYVGIADPEDDGEPFEEKMTRLTSELSDM FEKSHELEDEIRKKLGAIGYEI >gi|224531373|gb|GG658179.1| GENE 358 375784 - 376266 265 160 aa, chain + ## HITS:1 COG:PAB2150 KEGG:ns NR:ns ## COG: PAB2150 COG0732 # Protein_GI_number: 14520513 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Pyrococcus abyssi # 58 155 300 398 427 66 34.0 2e-11 MKYRLSDICHYVKGKVDVSELDNSTYISTENMLPDKGGVTEAASLPTTLQTQIYEKDDVL VSNIRPYFKKIWFADQNGGCSNDVLVFRANEGVEPGFLYYVLADDKFFDFSMATSKGTKM PRGDKKALMEYEVLDFNIDTQKKVASLLGDIDEKIRVNTD >gi|224531373|gb|GG658179.1| GENE 359 376994 - 378019 1148 341 aa, chain + ## HITS:1 COG:STM3755 KEGG:ns NR:ns ## COG: STM3755 COG3943 # Protein_GI_number: 16767039 # Func_class: R General function prediction only # Function: Virulence protein # Organism: Salmonella typhimurium LT2 # 10 341 8 342 345 231 38.0 1e-60 MKKKNEITIHSSTAEYLTFVASTGNSQDSFEIRYEDENIWLSQKMMAQLYDVEVNTVNYH IKKIFQDNELLEESVIRKFRITAEDGKTYNTKHYNLQLIIAVGFKVNNQRAVQFRKWSGQ IVKDYTIQGWTMDKERLKKGHMFTDEYFERQLQYIREIRLSERKFYQKITDLYVTAFDYD KNSKTTKLFFQTVQNKLHFAVHRHTASELIFERANANKKNMGLTTWENAPNGKIIKADVN IAKNYLNDQEMKYLERIVSMYLDYAELQAERKIPMSMEDWSKRLDGFLEFNGNELLIGAG KISSEQAKLHAETEFEKYRIIQDRLYKSDFDEFLLLEEETK >gi|224531373|gb|GG658179.1| GENE 360 378106 - 379095 1084 329 aa, chain + ## HITS:1 COG:SP0890 KEGG:ns NR:ns ## COG: SP0890 COG0582 # Protein_GI_number: 15900773 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 3 328 2 320 321 383 61.0 1e-106 MKEKIITAVLQQMQTMLNNAQMSRLQDILEYELFSYKIEKNDSMEEDIWTNERLLNTFLS AKRVEGCSEKSLSYYQKTIERMLNSIGKEIKYIVTDDLRSYLTEYQSEKQSSRVTIDNIR RILSSFFSWLEDEDYILKSPVRRIHKVKTISSIKDTYSDEELERMRDSCHEIRDLALIDI LASTGMRVGELVLLNRQDIKFGERECIVFGKGDKERVVYFDARTKIHLQNYLNTRVDSNP ALFVALRKPYNRLTIGGIEVRLRKIGKELEINKVHPHKFRRTLATIAIDKGMPIEQLQKL LGHRRIDTTLQYAMVKQSNVKLAHKKFIG >gi|224531373|gb|GG658179.1| GENE 361 379107 - 379634 513 175 aa, chain + ## HITS:1 COG:HI1286 KEGG:ns NR:ns ## COG: HI1286 COG0732 # Protein_GI_number: 16273200 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Haemophilus influenzae # 29 173 30 172 459 82 29.0 4e-16 MNKIKLKKIARSNLYSYNLKEDNWEYINYLDTGNITMNHINEIQHINLRVEKLPSRAKRK VRYNNIIYSTVRPSQKHFGIIKNILPNFLVSTGFVVLEIDPLKADADFIYYFLTQDKITS YLHSIAEQSTSAYPSIKYTDVEDIEICLPNLQLQKKVSKFLRLLDKKIELNKKTS >gi|224531373|gb|GG658179.1| GENE 362 380630 - 380791 182 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|317058591|ref|ZP_07923076.1| ## NR: gi|317058591|ref|ZP_07923076.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] conserved hypothetical protein [Fusobacterium sp. 3_1_5R] # 1 53 1 53 159 90 94.0 5e-17 MKNEIILEKDLKSIIKIGLDLLYKRDIYLIRKKVSERAAIFKFGVYFSNLISL >gi|224531373|gb|GG658179.1| GENE 363 381111 - 384260 3665 1049 aa, chain + ## HITS:1 COG:XF2739 KEGG:ns NR:ns ## COG: XF2739 COG0610 # Protein_GI_number: 15839328 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Xylella fastidiosa 9a5c # 5 1014 18 1050 1058 726 38.0 0 MLQAFTEANYENSIIQLFQSMGYQYVYGPDIERDFESPLFEEVLMDQLHMINPKAPLEAI QSALFKIKNFENGELIEKNNLFMEFLQNGIEVSYLEQGEQYSTQIYLVDYKHIEKNSFIV ANQWTFIENSNKRPDIVLFLNGIPVVLMELKSPSREEVDSSEAYSQLRNYMHEIPSMFIY NCICVMSDQLISKAGTITSDETRFMEWKTKDGSYENTRYAQFDTFFEGIFTKDRFLDILK NFICFSNIEGKKIKILAGYHQYFAVKKAIESTRRAVETDGKGGVFWHTQGSGKSLSMVFY SHLLQEALESPTIVVLTDRNDLDNQLYQQFVNCKDFLRQTPEQAKSREDLKSLLAGRKVN GIIFTTMQKFEESEEALSERRNIIVIADEAHRGQYGLSEKIKMTKNDEGEEVAKKVIGTA RIIRNSLPNATYIGFTGTPISSKDRSTREVFGEYIDIYDMTQAVEDGATRPVYYESRVVH LKLDEETLKLIDQEYEIMSQDADLEVIEKSKRELGQMEVILGNEKTIDSLVQDILNHYES YRQHELTGKVMIVAYSRSIAMKIYRRILEIHSHWTEKVAVVMTESNKDPEEWREIIGNKH HRAELAKKFKDNSSPLKIAIVVDMWLTGFDIPSLSTMYIYKPMSGHNLMQAIARVNRVFK EKVGGLVVDYIGIASALKTAMNDYTIRDRKNYGDQDISKVAYPKFLEKLSVCQDLFHGYE YTKFSTGNDLQRAKVISGAVNFMLDIRKKQKKESFLKEALLLQQSLSLCSSLVGESQRYE ASFFEAVRVLIIKLMNTGAGKKISLKEMNERISSLLKQSIKSEGVINLFDGIEKEFSIFD PHFLEEISKMKEKNLALELLKKLISEQVKIYTRSNVVKSEKFSEMIQQTMNRYLNGMLTN EEVVQELLKLAKEIQEAQEAGKELGLSSEELAFYDALSKPQAVKDADTNKELIALTKELT ESLRKNRTVDWQKKESARAKMRMMIKKLLKKYKYPPEGAEDALRIVMIQCELWTDNSVFH EKPEKEIYAERFMLEWQREYRMVAEETMK >gi|224531373|gb|GG658179.1| GENE 364 384358 - 385827 648 489 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|39938628|ref|NP_950394.1| ribosomal protein L13 [Onion yellows phytoplasma OY-M] # 115 487 173 545 546 254 37 5e-66 MEILNYRTYLTTLKLVFLKAISDLYPEHEVVFLNSLNNGLYGKIIYNNHVFREADYDKIK TQMKQIIDANLPIQIVSSNYEAIKLSPIEENREDIQELINTTLWTGIMKMELDGYVDYFY HLPYDRTGKLNAYDVYPYSSGFILKYPITDPNTLEQKIDTPKMAAIFEESDHWLRLMDVP NAGSINRKVLNHEIRSLIRINEALHNKNLAKISEQIVKNDKIKVITIAGPSSSGKTTFAN RLFIQLKADEVNPLVISLDNYYIGRKNIPLNEEGEKDYEALEALDIRLLNQNLVDLIDGK EVELPIYNFITGEREEKGKIVRLSNKHGVIIIEGIHGLNEAMTKYIPKEQKFKIYISCLT QLNLDKHNRIATSDVREIRRMVRDSLSRNTAAEETLAMWSSVRKGEEKHIFPFQEEADVI FNSNLVYEMGVLKNAAMRELVKVPTTSPYYADARRLIGLLACFLPIETDDVPDDSILKEF IGKSFFYNY >gi|224531373|gb|GG658179.1| GENE 365 385839 - 386390 613 183 aa, chain - ## HITS:1 COG:no KEGG:FN0534 NR:ns ## KEGG: FN0534 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 44 183 2 142 142 109 49.0 5e-23 MIFGVPMKIRKLFFILAPLMIGVGIYLLYRSRNLYYYQLLQDTHLHPYINQIRENAKIYR KIFSTWIVYSLPDGLWLFSFGAALLLDRVYYWMHLFIFSAIYALMIGIEYLQKLYGGHGH WLGTFDLQDIEAYTIAYLSILCFSLIFYFFQSKHKVHNRKKELGIDCIYIGIFGILGALP SLL >gi|224531373|gb|GG658179.1| GENE 366 386541 - 387185 600 214 aa, chain + ## HITS:1 COG:no KEGG:FN1272 NR:ns ## KEGG: FN1272 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: F.nucleatum # Pathway: not_defined # 9 213 6 210 211 68 27.0 2e-10 MAEKQEIENKKEKILEIFQKLVLEKGYSKVSVEEITSSLGISKGSFYSYFKSKTDMVLEC IEENLWISLERQKHIENISNSMESTLQNYFIDRFQRDVQHLKKELVLISLFKNLEILEES IVKRLICFEKTYIEYWEKQLEKYDEELNILEEERHEYAILLAKMIQGFRMSALFVTQDEN FFTTDVAEVLKRIEDKTILNKIEFLIKNILKMIK >gi|224531373|gb|GG658179.1| GENE 367 387201 - 388472 1547 423 aa, chain + ## HITS:1 COG:FN1273 KEGG:ns NR:ns ## COG: FN1273 COG1538 # Protein_GI_number: 19704608 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Fusobacterium nucleatum # 13 423 3 413 413 339 48.0 5e-93 MKKIWTMFFLVGSLAFAREITLEEAIQESMNHSKTLKISEKKLQISKLNRSQAIKKALPS VLYNTSYQRTEYERNISKNKSSMQLEKGGYKQSITISQPIFQGGAIIAGIQGAKAYETIA DLSYVQEGLNTRLKTIRTFSNIVNSKRNLQALENSEKQLQKRYQKQEAQLELRLITKTDL LKTKYNLLEIQSLIAKAKSNIEVQTEDLKFQMGIDKEEQLEVKEFNVPNHLTDTIDFQKD KEKALESSIQSLIAKSQVEIAKAQETAALGNMLPKINAFASYGVATERTKWKQTREDAEW MGGLSVSWNVFSFGSDYDNYQIAKLEKENKELSEMTAQDTIELTLKTAYSELQRLEILRE SRKRGLEAAELNFSMDQEKFDSGLISTIDYLLSETQLREARVNYYQAELDYYYAFEYYRS LLV >gi|224531373|gb|GG658179.1| GENE 368 388488 - 389582 1602 364 aa, chain + ## HITS:1 COG:FN1274 KEGG:ns NR:ns ## COG: FN1274 COG0845 # Protein_GI_number: 19704609 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Fusobacterium nucleatum # 3 351 2 363 370 337 51.0 3e-92 MRKQIIAIMLMGIVLFVACGKKEETPMERPVKKIVSEQVIIREMSQIFESDAVLEPKDKV NHNTERGGTIEKIYKKNGDYVKKGDLVMSFSDAGTKASYLQALANLQTAESSYRIAQGNH SKFKQLYDRGLVSHLEYVSYENTLISASGQLEVAKAMFQSAQSDYSKLERRADISGTIGN LFGKEGNKVNPLEDVFTVLNDSQMQAYIGLPGEYIANVKNGDHLTVHVDNTGKDYEAVIS EVNPIADTTTKNFMTKIILQNSEKEIKDGMYASVNLSIGSKQVLSVPDEAIFVRNLISYV FKIVDGKAVRVEVQAGSQNGEYTEIISKDIQEGDRIVVKGLFGLQDGDKVEESTPADLDP KQAN >gi|224531373|gb|GG658179.1| GENE 369 389605 - 392655 4151 1016 aa, chain + ## HITS:1 COG:FN1275 KEGG:ns NR:ns ## COG: FN1275 COG0841 # Protein_GI_number: 19704610 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 998 1 999 1020 1110 59.0 0 MTLSGLSIRRPVATSMIVISVIFIGIITMFSMRTELLPNMEIPTVTIRSSWSGAVAEDVE TQITKKIEAILPNVEGIDKIESTSSYGSSSIVVKFNFGTNADQKVTEIQREVSKILNDLP KDASNPVAKKIQAGIGSLSMVVMMSAPNKAELTTFVDEYLKPKFESLPGAAQVDVYGNAA KQLQIQVDSEKLAAYNLSPVELYNLISSSNTVLPIGTLQTGTKQLVVRYMGEMQSIEDFE NMIISSNGNTLRLKDISNVVLTREDESNKGYISGKEAITILLQKSTDGSTVDLTEKANKA LRELKGIMPKGTEYNIIMDTSVDIKSSITGVSSNALQGLILATIVLFVFLRNIRATFLIT LALPISVIFTFAFLKATGTTLNLISLMGLSIGVGMLTDNSVVVIDNIYRHITELHSPVLE ASENGSTEVSASIFASALTTMLVFIPILFIPGFAREIFRDMAYAIIFSNVAALIVALTLI PMLASKLMSNDVKISSDGKIFHKMREKYLKLISYALSHRKLTIFITLGIFVFSIFVSSFL KFNFMPKQDQGRYSITAELPNGLDLEKSDKIAKQIEAFVKEEPNTKTYFIIVGNNSVNVN VDIGKKDTRSTSVFDIIEKMRPLVSKIPDTRVSLKEDFGMGSIRRDVEFQIKGANLSEIK ALGALVQEEISKNPKVRDVKSSLDPGNQEARLILNRDKIRSYGINPVVIAQNLSYYILGG NRGNTTTIKTGTENIDVLVRLPKEKRQDINQLKNLNIKIGDNKFIKVGDVADIVYGEGSL SIQKKDRIYSVTISANDNGLGVRGVQQAFIEAFKKVNQSDAISYSWGGESENMNATMSQL SSALLIAIFLIYALIAAQFESFLLPFVVIGSIPLALIGVFLGLFILGQAMNMMTMIGIIL LAGIVVNNAIVLIDFIQLMRVRGMSRTEAIIEAGSTRLRPILMTTATTVLGMIPMALGFG EGSEIYKGMSLAVIFGLSVSTLLTLIVIPILYSLMDDFIMRGKHFFSNFKFFKKIK >gi|224531373|gb|GG658179.1| GENE 370 392668 - 393051 541 127 aa, chain + ## HITS:1 COG:no KEGG:FN1276 NR:ns ## KEGG: FN1276 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 126 5 129 131 124 44.0 2e-27 MEMSNYKMILIHVNESQKGRLEDFFEDIGFYYYAVQSHAERVISKTLRHKNNKIWPGTDC FFNLIVAEEKLEEMLSYLKTFRMSLPEGIIMSIGIIPVERVIPSLYQDDIPIKEELLKEL KKKHNYK >gi|224531373|gb|GG658179.1| GENE 371 393066 - 393596 645 176 aa, chain + ## HITS:1 COG:PA0368 KEGG:ns NR:ns ## COG: PA0368 COG0429 # Protein_GI_number: 15595565 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Pseudomonas aeruginosa # 2 170 32 203 332 71 29.0 9e-13 MLNYERRRITTEDEDFLDLDCLLTGNSRLAILCHGLGGSARAPYMKSTAKEFQRRNFDVV AMNYRSCSEEVNRRAKMYGMMTYLDLETVIKAFEEEYSEIVLVGFSMGGNIVLNFMVHLL KNYKMIKGAVSVSAPCDVWDSITDFEKLGNGEYQEYFLDRMKDCLREKNKKISRYF >gi|224531373|gb|GG658179.1| GENE 372 393562 - 393945 364 127 aa, chain + ## HITS:1 COG:STM3462 KEGG:ns NR:ns ## COG: STM3462 COG0429 # Protein_GI_number: 16766750 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Salmonella typhimurium LT2 # 2 121 229 347 355 59 30.0 1e-09 MKKIKKYPGIFEEAGIKLEEVLQSKGLQAFDETFTVKIEGFKDVDEYYRTTSTKGKLHLI TKPTLLLLPWDDIVVSKNCFPVEEGKKNPNLFFERPKFGGHLGYESKNQSFGLEERIVDF ILEEVVE >gi|224531373|gb|GG658179.1| GENE 373 393942 - 394898 864 318 aa, chain + ## HITS:1 COG:PA0368 KEGG:ns NR:ns ## COG: PA0368 COG0429 # Protein_GI_number: 15595565 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Pseudomonas aeruginosa # 4 307 7 321 332 172 33.0 8e-43 MIEYKPSFWFRNAHINTCYPTFFRKVDISYRRQRIFLEDGDFLDFDWVEKGNSKLILLCH GLEGSSESHYIKAFARYFSEKSWDVLALNYRSCSKEPNPSPFFYIAGKGDEISTALQYAS SYEEIVLIGFSLGANKVLHYLGTEIDIPKNVKMGVAVSPPCDLKGSSLLFARGWNKIYEQ YFLKQLKKKMIQKEEKYPNIFQKFEISLEEVQKAKTLVEFDNLVTSKLAGCKDAYEYYKK NSSLFCLKNIHHPSFILTALDDPMMSESCYPREEVEKNTFLYLETPKYGGHISYASFEKD YWLEKFIFEKVNLLKNLK >gi|224531373|gb|GG658179.1| GENE 374 394985 - 396184 1450 399 aa, chain + ## HITS:1 COG:FN2107 KEGG:ns NR:ns ## COG: FN2107 COG0153 # Protein_GI_number: 19705397 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Fusobacterium nucleatum # 7 396 1 388 389 509 66.0 1e-144 MEQMEIIVKRLCEEAKQLFSIEKNDTLEGYFSPGRVNLIGEHTDYNGGYVFPCALSFGTY AVLKRRKDKLCRMYSNNFKELGIFEISLENIIYDEKDAWTNYPKGVIKMFQELGVNTSFG FDILFEGNIPNGAGLSSSASIELLMAEIVRDLYQVEMDRVAMVKLCQKSENVFNKVNCGI MDQFAIGMGKKDHAILLDCNSLEYHYVPVVLEDASIVIANTNKKRGLADSKYNERRASCE AAVADLQKEGCKIQYLGELSLQEFEEKKSLILGEEKQKRAKHAVAENERTKIAVEKLNQN DICAFGKLMNDSHISLRDDYEVTGFELDSLVEAAWEEEGCLGSRMTGAGFGGCTVSIVKN EAVEHFIENVGKKYQEKTGLKAEFYIAKIGEGTRKLGEF >gi|224531373|gb|GG658179.1| GENE 375 396184 - 397677 1669 497 aa, chain + ## HITS:1 COG:FN2108 KEGG:ns NR:ns ## COG: FN2108 COG4468 # Protein_GI_number: 19705398 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose-1-phosphate uridyltransferase # Organism: Fusobacterium nucleatum # 3 494 2 505 509 654 61.0 0 MAEIHGTLNRLIKYGLENELIVDYDEIWVRNELMDLFHLTEWKEMPISACMMPKYPQSIL DTLCDYAVEQGIIEDTAGNRELFDTKIMGKLTPSPSQVIDRFRATSEFSKEVATQKFYEF SQKTNYIRMDRIAKNVYWKVPTEYGNLEITINLSKPEKDPRDIERQKNLPSSSYPQCLLC YENVGYAGRGNHPARQNHRVLPFILEEEKWYLQYSPYVYYNEHAIVFSREHRPMKISRGS FARITDFLEQVPHYFLGSNADLPIVGGSILSHDHYQGGNHEFPMAKAEIEEEIVFQGFEK VKAGIVKWPMSVLRISSPNREAIINLSDKILRTWREYSDEECGIFAYTGEEAHNTITPIG RRRGENFEMDLVLRNNRRSEEHPLGIFHPHKEYHNIKKENIGLIEVMGLAVLPGRLKEEL EIIRGYLKEESYLEKIKADERVIKHYDWIASFPNAEIDLEKEVGIVFSHVLEDAGVYKRT EEGRKGLLRFVEAVNEN >gi|224531373|gb|GG658179.1| GENE 376 397689 - 398678 1366 329 aa, chain + ## HITS:1 COG:FN2109 KEGG:ns NR:ns ## COG: FN2109 COG1087 # Protein_GI_number: 19705399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Fusobacterium nucleatum # 1 329 1 329 329 570 81.0 1e-162 MAVLVCGGAGYIGSHVVKALLDQGEKVVVIDNLITGHVDAVDERAELLLGDLRDEEFLNH AFEKHSIDGVIDFAAFSLVGESVEEPLKYFENNFYGTLCLLKAMKKYKVNHIVFSSTAAT YGEPENIPILETDTTFPTNPYGESKLCVEKMLKWCDKAYGIKYTALRYFNVAGAHASGEI GEAHTTETHLIPIVLQVALGQRAKIGIYGDDYPTQDGTCIRDYIHVMDLADAHILALNRL RKGGDSTVFNLGNGEGFSVKEVIEVCRKVTGHTIPAETSPRRAGDPAKLVASSEKAMHEL KWTPKYNSLEKIIETAWNWHKSHPNGYED >gi|224531373|gb|GG658179.1| GENE 377 398694 - 398978 406 94 aa, chain + ## HITS:1 COG:no KEGG:Hac_1467 NR:ns ## KEGG: Hac_1467 # Name: not_defined # Def: hypothetical protein # Organism: H.acinonychis # Pathway: not_defined # 1 93 1 93 94 99 53.0 3e-20 MATTIQLEKNGALKKSYLGFSWTTFFFGFFVPLFRGDAMWFIVMLILNACTLCMAQLILS FLYNGIYTKNLLKDGYKPADTFSEDILRRKGYII >gi|224531373|gb|GG658179.1| GENE 378 399050 - 399439 804 129 aa, chain + ## HITS:1 COG:FN1138 KEGG:ns NR:ns ## COG: FN1138 COG3576 # Protein_GI_number: 19704473 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase # Organism: Fusobacterium nucleatum # 2 128 7 142 143 162 61.0 1e-40 MLTDVMKEMIEKELAYVSTVSNDGIPNIGPKRSMRLLDEHTLIYNENTGKQTMKNLIDNG KVAVAYADWSKLDGYRFVGKAEVFTEGKYYDEAVEWAKGKMGAPKAAVVIHIEEIYTLRS GSTAGDKIS >gi|224531373|gb|GG658179.1| GENE 379 399576 - 400745 1713 389 aa, chain + ## HITS:1 COG:FN1148 KEGG:ns NR:ns ## COG: FN1148 COG1301 # Protein_GI_number: 19704483 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Fusobacterium nucleatum # 3 385 5 387 390 495 76.0 1e-140 MAKLKDNLIVKLLLGVIIGIIVGLYANEQVIGIINTIKFLIGQIIFFIVPLIILGFITPA ITKMKSNASKMLGTMLGLSYSSSVGAALFSMVAGYILIPKLNIITNVEGLKEIPELIFKV EVPPVVSVMTALVLSIVLGLAVIWTNSKKTEELLDEFNEIMLSVVYKIVIPLLPIFIAST FATLSYEGSITKQFPVFLKVIVIVLLGHYIWLAVLYLLGGAISGKNPWSLLKHYGPAYLT AVGTMSSAATLPVALSCAKKSNVLHDDVADFAIPLGATTHLCGSVLTEVFFVMTVSKILY GSLPSVGTMILFVFLLGIFAVGAPGVPGGTVMASLGIIISVVGFDETGTALMLTIFALQD SFGTACNVTGDGALALILNGIFKKELEKN >gi|224531373|gb|GG658179.1| GENE 380 400878 - 401684 933 268 aa, chain + ## HITS:1 COG:MA3472 KEGG:ns NR:ns ## COG: MA3472 COG3315 # Protein_GI_number: 20092284 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: O-Methyltransferase involved in polyketide biosynthesis # Organism: Methanosarcina acetivorans str.C2A # 6 263 14 273 274 197 38.0 1e-50 MTRIQLTGVEETLLIPFYARVYGSKHYASYFYDKEALEIFSKIDYDFSKFENGKMSLYGC LARSIILDREVKKFLEKYPNSKCISLGCGFDTRFSRIDNGKIQWFEFDFPGVIALRKQIF SSNDRVFSCVGNVLEEKIYQEIRQEEENVVIIIEGLLIYFTEEEVKKLFHILKRNFPKAT IFAEFSKPFIIKHQKYHDTVKDNMAKFRWGIQNAKEIEKVCPEVKWIGEWNLTEEMRPFS RYKLFLLAPFLRKVNNSIVKLKFKDSTN >gi|224531373|gb|GG658179.1| GENE 381 401698 - 402918 650 406 aa, chain - ## HITS:1 COG:FN0771 KEGG:ns NR:ns ## COG: FN0771 COG0635 # Protein_GI_number: 19704106 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Fusobacterium nucleatum # 1 403 1 405 411 382 48.0 1e-105 MWDYRYKTHHDVEKLLSKLIKNHICTKNAFLERLKETNPSGQLSLYVHTPYCDYICSFCN LNRKQGNQEVDNYAKRLCKEIKNYGNFRFCKSSEIDVIFFGGGTPTIYSETQLENILKTI HDSFSLAENCEFTFETTLHNLSQEKIFLLTKYGVNRLSIGIQTFSTRGRKLLNRRFSKEI VLKRLQEIRHSFHGTLCIDIIYNYPEQTIEELLEDVRHISDCHIDSVSFYSLIIEEKSKL SRLFQKNPFSFQYNLQKDKELHRIFCEQMRKQGYHLLELTKFVKKDKYRYIQNNYQAKHL LPIGTGSGGRIGNIGCYHMNSKLSFYMQYSSAYMKAYQLLGLFQFPDISEENLKSFSGKN YEKIRNKMNKFVEKGYFSLQNHLFIYTIEGIFWGNNIAAEILKLSQ >gi|224531373|gb|GG658179.1| GENE 382 403188 - 406502 3928 1104 aa, chain + ## HITS:1 COG:FN0499 KEGG:ns NR:ns ## COG: FN0499 COG1629 # Protein_GI_number: 19703834 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 20 395 12 382 743 179 34.0 3e-44 MKKEMILTLLCFASLQAVAAVQEVELNPTKIRGGGATYDGSVLSNEKKNVVIITKADIEK KNYRDLESIFKDSPVTSVVYTEAGPLVTLRGSGQKTAMRVKVLLDGVSINTVDDSMGVIP FNAIPVGSIEKIEIIPGGGITLYGSGTSSGVINIVTNQANRKNFGDISFTMSSFDTYNTT LNKGIAFGDKLFWNIGIEAEKGKAYREKEESKKLNVLSGIDYKINNKHRIKLHGSKFWAD FDGTNELDLISLQKHRRGAGKSDANVKSNRYSVSFDYEYKPTENLTFTSSYNQQRFRRDF TQDNRPYLTFLPSEWLEDFFGIPDGMNADLVIKNVNNHLTGRIEEKIQNGKIAGEWKYRE GRGKLSFGYEHSAHRLKRNMDVVVEPFNPITNNYFFLRNKEERIINEEILEQHPNQLMGF FDNVLGGFILSDRDSMEEYGFDFDKFNKKMNDLYYKHTTSEADKKKYENGDPSPWDYWET LKPNLWKVVYDLMQEKMSDYAKDGKTIYRREDSENYDQKPTVPILLKDEKFEDFLKLILP HMVDPTFVVQPVTQSMVDVKKTTDSFYLFDSYKLTDRLEVNGGLRYEKAKYTGNRYTKTE QVIKGNPDNSTTKSMIAMYTELSEAEYAKKNAGDRHKWSGNETSKEKLKELKEKGVTTIL MTDLTRKEKKEEENLGGEIGVNYRFNDTDTVYLKYERGFNTPLPTQLTNKTFDPKTKMKV YWESNLKTEKIDNVELGIRGMLTPNVTYSLAGFISDTQNEILSIVKNGSSHMLREWRFIN IDKTRRMGLEFQSQQNFEKLTLKESLTYVDPRILSNDYEKQVQQIGVDKAEEMYQNNQKV RDWAIENILFSEKSFTIPTGTSEEEIAKMKEESKRLGKEAVKIIQNLREKGIKVDYSAKE EKLREITSGMSPADQARIRKEANELGKEAEERVLAEPRKELEELIAKSAYPDIFKKHLRK FSNYKLIHEGTMKESIYKQFEEEIKASYTKGTLEKGSRIPLSPKWKGTLSADYQFTDKLK LGMNTTYIGSYDSAEPGKGYEIVMTKVPHHMVADFYGTYNINEEFSIKFGINNVFNHQYY LRQDSRTATPAPGRTYSAGFSYRF >gi|224531373|gb|GG658179.1| GENE 383 408072 - 409391 1431 439 aa, chain - ## HITS:1 COG:STM4407 KEGG:ns NR:ns ## COG: STM4407 COG1253 # Protein_GI_number: 16767653 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Salmonella typhimurium LT2 # 3 423 1 422 447 407 50.0 1e-113 MNLLIKLFLIFTLVGIGAFFAISEIALASARKLKLHTLVEEGNKKAQKILDIQENSGNFF AAVQIGINAVSILGGSLGASIVGDFFQELEWLSPLKPFGNIFSFLIVTWLFIEFADLLPK RIAMVYPEKIALAIIHPMLFLIFFLKPFIKIINGFASIFFKLFGMEQVRNEDVTYDDIFA VVDAGAESGILQEKEQSLIENIFELDSRWVSSIMTTRDEISYLALDDTEEELREKIMDYP HSKFLITESDIDSILGYITSKDLLPSLMLSKKSIKELIKNYRKHLLILPNTLTLSETLDR FNEAKDDFAIILNEYGLVVGLVTMKDVVNTLMGDVVFQNSEDQQIIERDEHSWLIDGVTP IEDVKKVLDRIEKFPEEDSYESIAGFLMYMLKMIPKRGAKLEFMDYQFEIVDVDNFKIDQ ILVIDMLEEKKIEVENTAS >gi|224531373|gb|GG658179.1| GENE 384 409458 - 411188 2365 576 aa, chain - ## HITS:1 COG:FN1793 KEGG:ns NR:ns ## COG: FN1793 COG1080 # Protein_GI_number: 19705098 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Fusobacterium nucleatum # 2 574 7 579 579 757 68.0 0 MERKFIKGIDASPGIAIGKVFLYQESELTIIQESNRTVEEEKQRLIHGQEKTKEQLEAIK EKTLLTLGKDKADIFDGHITLLEDEDLLEEINDLLEEGNISAEFALKTQIEEYCKMLSNL EDPYLRERAADLQDIGKRWLYNVANVTIVDLSSLPANTIIVAKDLTPSDTAQVNLQNVLA FVTEIGGKTAHSSIMARSLELPAVVGTGNICSLAKNEEIIIVDALTGDIILNPSQEELET YKSKQEHFLQEKEMLKQLKNKAAISKDGVEVGVWCNIGSPKDVKGVLNNGGQGIGLYRTE FLFMNNDRFPTEEEQFEAYKEVAMALEGKPVTIRTMDIGGDKSLPYMELPKEENPFLGWR AIRVCLDRTEILETQFKALLRASAFGYIKIMLPMIMDITEIRRARKLLEKCKAELKEKGI AFDENIQLGIMVETPAVAFRAKYFAKEVDFFSIGTNDLTQYTLAVDRGNENISHLYNTYN PAVLQAIQASIEGAHEAGISISMCGEFAGDEKATALLFGMGLDAFSMSAISVPRIKQNIL NIDRASAKAFVDEVMNCATTEEVLAKVEEFYSKLKK >gi|224531373|gb|GG658179.1| GENE 385 411256 - 411519 465 87 aa, chain - ## HITS:1 COG:FN1794 KEGG:ns NR:ns ## COG: FN1794 COG1925 # Protein_GI_number: 19705099 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Fusobacterium nucleatum # 1 87 1 87 87 115 78.0 3e-26 MANKTVEITNETGLHTRPGNEFVSLAKTFSSQIEVENQDGKRVKGTSLLKLLSLGIKKGT KVTVYAEGEDAEQAVEQLANLLENLKD >gi|224531373|gb|GG658179.1| GENE 386 411634 - 412656 1651 340 aa, chain - ## HITS:1 COG:AF0807 KEGG:ns NR:ns ## COG: AF0807 COG1304 # Protein_GI_number: 11498413 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Archaeoglobus fulgidus # 37 336 82 364 366 128 33.0 1e-29 MTLQEVYQEARGRMKGFCSICPECNGKMCAGKVPGMGGCGSGFSFQHNYTSLKNIHLQMR CLHKAKDPKTTLQLFGQNLSMPILGAPITGPKFNFGGYVNQEEFCDDIILGAKATGTLAM IGDTGDPTAYEAGIKSLKKANGFGIAIIKPRYNEEIIKRIRIAEEAGAIAVGIDLDGAGL LTMKLFNQPVEPKSMEDLKELVNSTNLPFIVKGILSVEDAKACVEAGIDAIVVSNHGGRV LDDCISPVEVLQDIVEAVGNQIIVLVDGNVRSGEDVLKYLALGARAVLIGRPCIWASVGN RQEGMETLFQSLQSQLYKAMLMTGNHSVQEISPNTIFKNA >gi|224531373|gb|GG658179.1| GENE 387 412775 - 413914 1303 379 aa, chain + ## HITS:1 COG:FN1797 KEGG:ns NR:ns ## COG: FN1797 COG3842 # Protein_GI_number: 19705102 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Fusobacterium nucleatum # 8 378 1 371 376 553 74.0 1e-157 MVEVKQRLEKNDIRIEHIRKSFDGVEILKDINLTINQGEFFSILGPSGCGKTTLLRMIAG FISADEGAIYLGNENLLDLPPNLRNVNTIFQKYSLFPHLTVYENVAFPLRLKKVEEKIIE EEVKKYISLVGLEEHMQKKPSQLSGGQQQRVAIARALINKPGVLLLDEPLSALDAKLRQN LLLELDLIHEEVGITFIFITHDQQEALSISDRIAVMNKGEVLQIGTPAEVYESPANMFVA DFLGDNNFLEGEVIEILENNFAKIQTKDLGELIIEQDKKVEIGNHVKVSIRPEKIKVTKT KPKEIRSTINTLPVYVNELIYTGFQSKYFVHLCSKEEYTFKVFKQHAVYFDDNDEGAIWW DEDAFISWDADDGFLIEVV >gi|224531373|gb|GG658179.1| GENE 388 413916 - 414761 890 281 aa, chain + ## HITS:1 COG:FN1798 KEGG:ns NR:ns ## COG: FN1798 COG1176 # Protein_GI_number: 19705103 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Fusobacterium nucleatum # 2 277 3 278 284 371 74.0 1e-103 MKDSKKKYFYAFPITLWLTLFFMIPMLIVLSYAFLKKGTYGGVEFSFSMAAFSIFQDKVF LTVLWKTIYISMWITALTVFFSIPVAYYIARSRYKQELLFFIIIPFWTNFLVRIYSWISL LGSNGFINSLLMKFHILEEPIKFLYNPAAVVVISVYTSLPFAILPLYAVVEKFDFSLLEA ARDLGATNCQAFFKVFIPNIKSGIVAATLFTLIPSLGSYAVPKLVGGTNATMLGNIIAQH LTITRNWPLASTISGSLIIITSIAVWLFSKIEKKGGKEYDE >gi|224531373|gb|GG658179.1| GENE 389 414751 - 415527 727 258 aa, chain + ## HITS:1 COG:FN1799 KEGG:ns NR:ns ## COG: FN1799 COG1177 # Protein_GI_number: 19705104 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Fusobacterium nucleatum # 2 257 8 263 264 341 76.0 8e-94 MMNRRRTSLFFFCFTMLFFYLPLIILVVYSFNEGKSMVWKGFSLKWYRELFTYSENIWKA FRYSIGVAIFSGFLSTVIGTLGAIALKWYSFKSKKYLQLLTVLPLVVPDIIIGVSLLIMF ASIHWKLGLLTIFIAHTTFNIPYVLFIVMARLEEFDYSVVEAAYDLGATERQALQKVILP MLFPAIVSGFLMAVTLSFDDFVITFFVAGPGSSTLPLRIYSMIRLGVSPVINALSVILIA LSILLTISTKKLQKNFIG >gi|224531373|gb|GG658179.1| GENE 390 415616 - 416425 1168 269 aa, chain + ## HITS:1 COG:FN1800 KEGG:ns NR:ns ## COG: FN1800 COG0652 # Protein_GI_number: 19705105 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Fusobacterium nucleatum # 1 259 1 260 274 320 65.0 2e-87 MKKLVKLFLAMFTMLLLTSCANEMVKDTKKLFTDTSAKYNNIVATFVTTQGEIEFYLYPE AAPITVANFINLAKRGFYDETKVTRAVENFVVQAGDPTGTGTGGPGYTIPDEFVEWLDFY QYGMLAMANAGPNTGGSQFFFTLYPADWLNGLHTIFGEIKSEADFQKIRKLEVGDVIKEV KFTGDVDLILSLNKYQVEAWNERLDQVYPNLKKYPIADPTPEQIKAYQTELDRIFTRDDK KNSAKFEYPIPKLIRAVGNMFQNKKEVVE >gi|224531373|gb|GG658179.1| GENE 391 416425 - 416853 596 142 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466185|ref|ZP_05630496.1| ## NR: gi|257466185|ref|ZP_05630496.1| Heat shock protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 142 1 142 142 262 100.0 8e-69 MRKKIMILMVLMFSLLSLPSMAAQPIKEVEKTIVLAYQDLVGKEYKMIGPFGGNKITLGF DVQNRIYGYTGLNRFWGQAEIENGKVKVGEVFTTENKGVQEQRILQVKYLTILKDVESIH FEGENLVLTTPFQEKLVFQPIL >gi|224531373|gb|GG658179.1| GENE 392 416910 - 417623 699 237 aa, chain - ## HITS:1 COG:BH0873 KEGG:ns NR:ns ## COG: BH0873 COG2188 # Protein_GI_number: 15613436 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 237 2 237 237 164 39.0 1e-40 MKKYIEVYQDIKKKIEEGELKTGEELVSETELCEQYSYSKDTIRKALSLLEMNGYIQKIK GKNSTILGHGRMKNNFLGSIQTSEELNRDNKYSIKNKLISLEVIPATTKLIEIFSSNSKE KFYKIKRSRSIDGENLEFDIFYFDKNLVPNLTAEIVTKSTYEYLENTLKLKISHSRREIF FRHATEEEKKYMDLQNFNMVAVIKSITYLSNGSILQYGTTSYRPDKFSFISIAKRAK >gi|224531373|gb|GG658179.1| GENE 393 417775 - 419316 1792 513 aa, chain + ## HITS:1 COG:SPy1292 KEGG:ns NR:ns ## COG: SPy1292 COG1640 # Protein_GI_number: 15675245 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Streptococcus pyogenes M1 GAS # 1 497 1 497 497 610 57.0 1e-174 MIKRSSGVLMHISSLPGKFGIGTFGKEAYQFVDFLEETKQSYWQILPLTTTSYGDSPYQS FSAIAGNTSFIDFDFLQKEHLLEERDYMDIVYGGNLERVDYAAVYESRQIVLRKAVKKFQ ESKKWMSELEVFQKENKNWLDDFSEYMAIKGYFSNKALQDWEDMEIRRREKKSLEKYREM LKEEILYHRITQFLFFYQWKNLKKYANQKGIQIIGDMPIYVSSDSVEMWTMPELFKVDKE NRPLYVAGCPADEFSPDGQLWGNPIYDWKKHKEKKYSWWIHRIQESLKMYDVIRIDHFKG FSDYWQIDKNAIVAKEGTWEAGPGIELFKTIRKELGEVPIIAENLGFIDEKAQKLLEDCG FPGMNILQFAFEGGADNKDLPYHYIKNSVSYTGTHDNPVIYAWFEDQTEEVKRYVCQFLN IREGETIPQAMIRGIYSSVSILAIVTMQDLLEKGKEARMNTPSLMGGNWEWRMRAEELSF DKKGFLRHMTGLYGREREDKVEEEDEITNNKRS >gi|224531373|gb|GG658179.1| GENE 394 419288 - 420085 857 265 aa, chain + ## HITS:1 COG:SPy1985 KEGG:ns NR:ns ## COG: SPy1985 COG3568 # Protein_GI_number: 15675775 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Streptococcus pyogenes M1 GAS # 2 261 3 269 272 115 31.0 1e-25 MKLLTINVHSWLEEKQEEKMELLAKVIAEKRYDVIALQEVNQKIEARLLKGEIREDNFLY QLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYCTNSKTVYSISSR KIVKIFLEIEGKEIEFYSCHMNLPDCIEENMEQNIQNILKHSSRNCLKILMGDFNTDAFH DESSYQKILEQGLFDSYTLSKKKDDGVTVYKNISGWENSVEEKRLDYIFLTEQYEVESSY VIFNGKNYPCISDHNGLEVILKIKE >gi|224531373|gb|GG658179.1| GENE 395 420100 - 421674 2386 524 aa, chain + ## HITS:1 COG:BS_glvC_1 KEGG:ns NR:ns ## COG: BS_glvC_1 COG1263 # Protein_GI_number: 16077887 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus subtilis # 1 444 1 450 452 538 58.0 1e-152 MLQKLQRFGGAMLMPSVLFAFAGLVVGLTSILKNPNLVGNIAEQGTLWYHFWVVVEEGGW TLFRQMPVVFALGIPIGLAKKANGRAALETFVIYMTFNYFINAFLTQFSFFGIDMSMDKI PGITMIAGVKTLDTSIIGSILIAGISVYLHNKYFDKKLPELLGIFQGTSFVIILGFLLMI PVAFGTAIIWPKVQLGIAALQGFLKGAGVAGVFSYTLLERLLIPTGLHHFIYGPFMFGPA VVENGITAYWATHIQEFAAAVEPLKEIFPQGGFALHGNSKVFGLPAAALAMYVTSKSSKK KIVAGLLIPAALTGFLTGITEPIEFTFLFAAPVLFVVHAILGACMSSLMYVFGVVGNFGS GLIDFLAINWLPMFSNHSAQVIVQIGIGLIFSVIYFFVFRFLILKLNLKTPGREEEEEET KLYSKKEYRERESQKSSQAKTTDEENYLEQAKMILEALGGKENIAEVTNCVTRLRVTVKD ETLVQADKDFKEAGAKGVVRNGKSFQVIIGFSVGQVRAAFDSLL >gi|224531373|gb|GG658179.1| GENE 396 421730 - 422278 909 182 aa, chain - ## HITS:1 COG:FN1303 KEGG:ns NR:ns ## COG: FN1303 COG2096 # Protein_GI_number: 19704638 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 182 1 183 192 197 57.0 1e-50 MAETKYVNLNKVYTKRGDKGKTDLFGGSQASKASLKVNAYGAIDELGAFLGLVRFYSKEE DIKSLMLELEKKLLIVGGFLASDEKGQAMMKVKIEEEDIRFLEEKIDFYNAKLPDLFAFI LPGDTEVSSYLHVARTVARRAERAMVALAETETLQENLLKYINRSSDLLFILARYDAEIL QK >gi|224531373|gb|GG658179.1| GENE 397 422302 - 422757 653 151 aa, chain - ## HITS:1 COG:FN1304 KEGG:ns NR:ns ## COG: FN1304 COG0629 # Protein_GI_number: 19704639 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Fusobacterium nucleatum # 1 151 1 154 154 138 53.0 4e-33 MNVISLMGRLTRDPEVKFGQSGKAYCRFSVAVNRPFSKDEADFINCVSFGKTAELIGEYF RKGHQIALVGRLQMNQYESNGEKRTSYDVVVDSFDFISTKSSSDTRNYENSYDSRSYETK NTENRMSSTPKKDTFEDNLDSEAMLDDEFPF >gi|224531373|gb|GG658179.1| GENE 398 422912 - 425590 3316 892 aa, chain + ## HITS:1 COG:FN0705_2 KEGG:ns NR:ns ## COG: FN0705_2 COG0749 # Protein_GI_number: 19704040 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Fusobacterium nucleatum # 392 892 1 501 501 573 62.0 1e-163 MLKKRRGSMKMKRALLLDVSAMMYRAYYANMNMRTKEMPTGAVYGFLLTLFQLLKEYEPE YMAAAFDIKRSHLKRTELYAEYKSNRDSAPEDLLKQIPYIEAVLDAFGIQRIKIEGYEAD DVLGSLSTKLSKKGIPVTIVTGDKDISQLLDENIEIYLLGKEVLKTREDVKNYIDVYPEK IPDLFGLIGDSSDCIPGVRKIGPKKAVPMLDKYENLEGIYENIDKLIEIPGVGKTLIEIM KEDKELAFLSRTLAKIEKNLDFSFSLEDLYFEKKEEALREIFQKLEFKSFLKRLEQKEEK EQIKVAEVIPQKKKSEKSENRIVNSIEELKAEIKEFTEEEKIILLYDRLGLTCTSSNKSI YIPLFHIGLLESNIDLEECQKLFFSLKGKLYTYDLKELLKLGFSFQKPVYDMMIAYHLVS SQTKEDYTSIGQYYLKTIAEDEKTVFAKQKIETLSIDSYGNFLLKRSQILYSCLEPLEKD LKEKELENVLWETELPLIPVLASMEKQGIKIDRKYFQKYSLELNEKLVLLEKEIWKEAGE EFNINSPKQLGEILFLKLNLPTGKKTKTGFSTDVEVLENLSSQGFQIATNLLEYRKLAKL KNTYVDPIPKMVKFDDRIHTCYHQIGTVTGRLSSSDPNLQNIPVKTEEGIRIRQGFIARD GWKLLSIDYSQVELRVLAALSKDENLVKAYQEKQDLHSVTAKKIFELEEKEEVSREQRTM AKIINFSIIYGKTPFGLAKELGISVKDAAEYIKRYFAQYPRVAQFETEIIEFAEQHGYVE TYFGRKRIIDGIHSKNRMVKNQAERMAVNTVVQGTAAEILKKVMIKIYSWLLGKTDIYLL LQVHDELIFEIQEERVEEYVKTLTNFMKNTIQLEEVELEVNTNIGNTWAEAK >gi|224531373|gb|GG658179.1| GENE 399 425603 - 426493 921 296 aa, chain + ## HITS:1 COG:FN0706 KEGG:ns NR:ns ## COG: FN0706 COG1481 # Protein_GI_number: 19704041 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 295 1 295 299 328 63.0 7e-90 MSYSSQVKTEITSRESITNLEKLAELYGIFQSKDAIGRYEINLRVENSFLAKRVYSLLKE VTTLKIGIKYSICNKLGEHNVFSIEVFRQKGIKEFLSSLQFRYIDIVSHEEILKGYIKGM FLACGYMKDPKKEYAMDFFIDKKEIAEDFYRILLHNKKKVFITKKRNKTLVYLRNSEDIM DMLVLMGAMKQFFSYEETTMMKDLKNKTIREMNWEVANETKTLNTGNYQIKMIEYIEENM GLNNLTPVLLEAVQIRLEHPESSLQELADFIGISKSGIRNRFRRIEGIYEKLKEEA >gi|224531373|gb|GG658179.1| GENE 400 426504 - 427469 440 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 13 300 14 305 317 174 34 7e-42 MKVIKNILDIEENLQKSYVAIGNFDGLHTGHRMIIKRAMERAKEKDGVSIVFTFQNHPME LLRKDGRSVKYINTNEEKLFMLEKMGVDYVVLQPFTQDFADLTPLEFVRLLKNKLGVEEI FVGFNFSFGKGGVAKTKDLVYLGEGEGIYVHEFKAITSGEDVISSTLIRKSMMTGEFERA LKLLGHPMIVIGEVIHGKKIARKLGFPTANIQIKDRLYPPFGIYGAKLQIEGEDQIRYGV INVGVNPTLKPGEFSLEVHILNFDEDIYGKKMYIELMEYLRTEEKFDSVEELVACIANDV AVWTKRSEELKDGCCIKIGEF >gi|224531373|gb|GG658179.1| GENE 401 427438 - 428124 753 228 aa, chain + ## HITS:1 COG:FN0708 KEGG:ns NR:ns ## COG: FN0708 COG1354 # Protein_GI_number: 19704043 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 2 224 3 225 225 201 55.0 7e-52 MDVVLKLENFEGPLDLLLQLIEKKKVKIAEIQISQLIDEYLEIISQAKEENLELKADFLV VASELLEMKALSLLKLEKEKEKEEELRGRLEEYKIFKELGVQLSLFEKEYNISYSRGEGR KVIKKIKKEYDLIHFGSNDLYQIYKKYSEQLEKKEYLELALEKAYSLRDEMDKLYLHIYQ KNYSFAELFDFAENKTHLIYIFLAILELYKDGKIEIEEEGVRKCLKAQ >gi|224531373|gb|GG658179.1| GENE 402 428097 - 429566 546 489 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803542|ref|ZP_02197411.1| 30S ribosomal protein S20 [Vibrio campbellii AND4] # 1 427 2 439 520 214 30 3e-54 SQKMFKSSIGTMIITMISRVLGLFRGSLIAYYFGSSYLTDAYFSAFKISNFFRQLLGEGA LGNTFIPLYNQKCEQEGEEKGKAYIFSVLNLVFLFSFLISLGTVFLSNSIIDFIVVGFPE ETKSLAAILLKIMSFYFLFISLSGMMGSILNNFGEFLIPASTSIFFNLAIIVSAMFFSKT YGIYALAFGVLIGGIFQFLVVWYPLWKKIGKHSFHIDWKDKYLGLLGYRLIPMLVGVVAR QVNTIVDQFFASFLAVGGVTALENASRVYLLPVGVFGVSLSNVVFPSLSKAAAKKDYTKI QRELERGLNILLFLVVPSMVVCILYAKEVIRLLFSYGKFGEDAVTITAQALLFYSIGLYA YVGVQFLSKGFYALGDNKRPARYSIMAIVINIALNALLIQKMEYRGLALATSVASCCNFI ALVVTFHKKYISLAFLSCIKIAMLSIAASLFAYFISRALPYILLKFVAFAILYLLCWIPL FYKKRREIF >gi|224531373|gb|GG658179.1| GENE 403 429566 - 431011 1578 481 aa, chain + ## HITS:1 COG:CAC2309 KEGG:ns NR:ns ## COG: CAC2309 COG1002 # Protein_GI_number: 15895576 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Clostridium acetobutylicum # 1 449 52 553 581 129 28.0 1e-29 MGKKHYVIYTPIQESKQIAKLAFTYAPPKVKWKLADLSCGNGNLLVSFAGYMKEQNRMIP IQYYGYDIDEKAIIEARNRLLNENCYFSCEDSLFLGKEKKFDIILGNPPYLGEKNHKEIF DDLKKTEFGKKYYEGKMDYLYFFIEKAIDLLEEEGILVYLTTDYWLVADGAKTLRRTLKK EGEFLYFQDYNTSLFEGALGQHNLLFIWRKGKKGSQVLVQEKEIKFYIEQEELYAENGNI YLWQPKIKKQLQAIKEKANYRLGDLLDIKQGIVSGCDKAFVLNHYEEELKEYLKPFYKNK DIFSYSLEKQEEFWILYLNEKREWNDILEKYLSPYREKLAARREVRLGKIAWWNLQWARE EKIFTQAKILGRQRCKGNWFAYSEEDVYGSADIYYFLPKYEDLDLFYILAYLNSSLFSFW YSHCGKKKGNLLEFYSKPLMEVPIYYPENLSERREVSNLAKLQIQKYSIERQQKIDNYFK F >gi|224531373|gb|GG658179.1| GENE 404 431079 - 431759 763 226 aa, chain + ## HITS:1 COG:no KEGG:FN0710 NR:ns ## KEGG: FN0710 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 8 224 6 224 225 121 39.0 2e-26 MSLLSSLFGSKEVEKENLEKIERLEQKILGKEKEIERLILELETVNNSTKIKPRQLEIFE KNVKDSREEINRLNSVLKSFGIPVKKQYYRYKVELAKLYSASRFREVLDFLLAKGYIFIS DVPFSSLQEEIIVLKNGEEALKRHSDYLQDNYDWEIATYRNKGEKLIKIFGRGKKLTQFF SEYYLEYMDDLDRIDLNILAQYGCDAELIQEVKEKREQYYLEQREQ >gi|224531373|gb|GG658179.1| GENE 405 431770 - 432942 1577 390 aa, chain + ## HITS:1 COG:FN0711 KEGG:ns NR:ns ## COG: FN0711 COG0452 # Protein_GI_number: 19704046 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Fusobacterium nucleatum # 1 385 1 390 404 460 63.0 1e-129 MKKILLGVTGGIAAYKAANFTSLLKKRGYEVKIIMTENATKIITPLTLETLSKNPVCVDM WHEKAHYEVEHISLAHWADVVVILPATYNIVGKIANGIADDMLSTVIAATNKPVFFALAM NVQMYENPILYENIEKLKKYHYHFIEAAEGMLACQDIGKGKLEKEEDVIWEIESYFLAQT LEGKLKNKKVLITGGPTEEAIDPIRYLSNRSSGKMAYALAKAAVAGGAEVSLISGPTHLE KPRRLKEFVSIRGAREMYQEVESRFETCDIFVSCSAVADYRPKEYSPIKIKKKEGDLRID LERNPDILLEMGKRKSHQILVGFAAETNDIEENAQRKLEKKNLDYIVANDSKTMNQEMNT VSIIKKGGSKLEIQEKAKEELAYDIWKNIL >gi|224531373|gb|GG658179.1| GENE 406 432958 - 433497 565 179 aa, chain + ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 6 179 8 181 186 186 55.0 2e-47 MKKEAELFWSFFKIGAFTLGGGYAMIPLMQDEIVTKKKWLTDEEFLDALAIAQSSPGVLA VNTSIMTGYRISGRLGIAAAVLGAVLPSFLIILCLSTVIIQYREAKLFQQVFFGVKPATV GLIFIAVYKLCKSTKLNWTHYWIPLLVAVLVGMNFMSPVWIIICTMIIGNLYYAWRDKK >gi|224531373|gb|GG658179.1| GENE 407 433494 - 434018 639 174 aa, chain + ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 1 170 1 169 176 135 51.0 4e-32 MIYIHLFLVFLKIGLFSFGGGYAVLSLIQQEVIEKYQWVSLSEFTEIVAVSQVTPGPIGI NSATFIGYKVTGNAFGSLCSTTGVVLPSIIILVLISLFLQKFKDSLTVKRIFLSLRPVVL GLVLGAGVSLLHPENFGHPATYVVFAMVVLAGIFTKINPILLILLSGTVGFFVL >gi|224531373|gb|GG658179.1| GENE 408 433969 - 434964 1084 331 aa, chain - ## HITS:1 COG:BMEII0621 KEGG:ns NR:ns ## COG: BMEII0621 COG3839 # Protein_GI_number: 17988966 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Brucella melitensis # 1 289 1 318 351 302 48.0 8e-82 MNILTIKNLGKQYQKKEWALHHINLEITEGEFLILVGPSGCGKSTLLRLIAGLEEVTEGE ILFHSNKKDIAMVFQNYTLYPHMTVYENLAFPLKVKSWSSEKIKNKILEIAKILEIENLL QRKPNELSGGQKQRVALGRAMVRDANIFLFDEALANLDTNLRSQMRYELLSLQKKINKTF IYVTHDQTEAMTMGDRIVVMKEGHIEQIGTPKEIYLDPKTTFVASFLGNPSMNFLKSENY LLGIRSEDIKIIEKETEDSYLFLSEFTEFLGSRSYLHGQVRDTPFIIEIPPTKEYKKGDR LFLDFPLSKRYYFNILTGQRIPLFQIKESKV >gi|224531373|gb|GG658179.1| GENE 409 435096 - 435518 426 140 aa, chain + ## HITS:1 COG:no KEGG:FN0788 NR:ns ## KEGG: FN0788 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 138 1 137 139 139 49.0 3e-32 MINYNRFIEEFTQGKCHSFEDFQRIAKQFGLFFEKINGEMILGYQGRGEVDQVCYEFYRY FFPETKLQAKNFNLISKIHELHFQFVLEQVNEVYQKYNLPPRYDRTLSIRENAVLLLNTL KIKTAIRKEDLDFIQYILRY >gi|224531373|gb|GG658179.1| GENE 410 435597 - 437108 2146 503 aa, chain + ## HITS:1 COG:FN2106 KEGG:ns NR:ns ## COG: FN2106 COG1288 # Protein_GI_number: 19705396 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 2 503 17 518 518 774 85.0 0 MSEKKKRSFPTAFTVLFIILILAAGLTYLVPSGKFSRLTYDDITNEFVITDHNDEVSTEA ATQEVLDRLHIQLALDKFTEGIIRKPIAIPGSYQRIEQHPQGFLDVVRAPITGTMDTVDI MIFVLILGGIIGIVNKIGAFDAGMSALSKKTKGKEFLLVVLVFALTTLGGTTFGLAEETI AFYPILMPIFLVSGFDALTCIAAIYMGSSIGTMFSTVNPFSVVIASNAAGISFTEGLIFR IVTLILASIVTLGYMYWYAKRVNKDKTKSFVYSDEATIQERFLGNYDASAETPFTWRRKL CLIIFALAFPILIWGVALGGWWFEEMSALFLVVAIVIMFLSGLSEKEAVNTFVSGSSELV GVVLTIGLARSINIVMDNGFISDTLLYYSTEFVAGMSQGVFAVAQLVIFSFLGFFIPSSS GLAVLSMPIMAPLADTVGLSREIVINAYNWGQGWMSFITPTGLILVTLEMAGTTFDKWLK YILPLMGIMGIFSVVMLIINTML >gi|224531373|gb|GG658179.1| GENE 411 437133 - 438569 2128 478 aa, chain + ## HITS:1 COG:FN1277 KEGG:ns NR:ns ## COG: FN1277 COG2195 # Protein_GI_number: 19704612 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 3 478 4 486 486 491 54.0 1e-138 MRKLEGLKPERVFYYFEEISKIPRESYHEKEISDYLVQFGKDHNLEVYQDESLNVVLRKK ASSGYENAPGVILQGHMDMVCEKEEDSKHDFSKDPIDLLIEGNHITANKTTLGADNGIAV AMGLAVLEDENLLHGPLELLVTTSEEVDLGGALALKSGILQGKMLINIDSEEEGILTVGS AGGEGVEITLPIEKINIRHPFAYRIKIQNFLGGHSGAEIHKQRGNANKAMVEVLDLLKEK VDFLLVSVKGGSKDNAIPRAAEVIIATEEKLDMTLREVLKEVKELYISFEPQVEMFFEEI INVYEAIDENSFYQYVNLMEEIPTGVYTWMKDYPEIVEASDNLAIVKTEEESIKITISLR SSEPDILSRLKKCISEIAEKYKAKYEFSAGYPEWRYRSDSPLREKAIQIWKELTGEEMKV AIIHAGLECGALSQNYPDIDFISIGPNMQDVHTPEEKLEIASTEKAYQYLVKLLQELK >gi|224531373|gb|GG658179.1| GENE 412 438594 - 439256 706 220 aa, chain + ## HITS:1 COG:FN0217 KEGG:ns NR:ns ## COG: FN0217 COG0664 # Protein_GI_number: 19703562 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Fusobacterium nucleatum # 1 210 1 211 217 116 33.0 4e-26 MIKKEDRIYFEKLFPFWEKLTHQEKNYFIINSRTMTFTKGVDISSSPECFGLTIIKNGKI RVFLTSKEGKELSLFFLETMDIGVLTAQCIYPKLQVSINLHTEEVTEVIVMNPEAFSLMR KRNSEVSDFNMDLIYTRFSEIIEQMETALFVPLSVRLIRYLLKQEKKELIITQEEIARHL GSAREVITRNLKLLQNAGCLQVSRGKIQILSEEKLKTMLD >gi|224531373|gb|GG658179.1| GENE 413 439354 - 441627 2748 757 aa, chain + ## HITS:1 COG:MA3787 KEGG:ns NR:ns ## COG: MA3787 COG0493 # Protein_GI_number: 20092583 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Methanosarcina acetivorans str.C2A # 299 754 13 467 469 496 58.0 1e-140 MYNIIEKKNLSKNIYLMKIKAEALVEAAKPGQFLIVKIDEKGERIPLTICDYDKEEGSVT IVFQVLGESTKEMAKMEVGDFFADVLGPLGKESDLLHEEKKVLQKKKYLFVAGGVGTAPV YPQVKWMKQQDCFVDVIIGSKNKESLIFEEEMRKVATNVYVCTDDGSYGSKGLVTDKIQE LVELGKKYDHAIIIGPMIMMKFAVEVCKQYGISTTVSLNPLMVDGTGMCGACRVSIGKEV KFACVDGPEFHGEEVNFDEALRRQRMYRTEEGRNILKLEDGENHHNPSCPNHEVVFVDRK KRIPVREQKPEERNQNFEEVCYGYSLEEAKLEASRCLQCKNPLCVQACPVSIDIPTFIRE IKEDNLQAAADTIAKYSSLPAICGRVCPQESQCEGKCIVGIRGEAVSIGKLERFVGDWAI ENKTSFCIPEKKQQKVAIVGGGPAGLTAAGDLAKKGYEVTIFEALHKLGGVLSYGIPEFR LPKEKIVEKEIENLLQLGVKVETNSLIGRTFTVDELLDKKGFSAVFIASGAGLPRFMNIA GENLNGVISANEFLTRVNLMKAHQSTYATPVKIGKRVLVIGGGNVAMDAARTAKRLGAET KIVYRRSEKELPARLEEIQHAKEEGISFLFLSSPIEILGDENAWVKGVKCIRMKLGEMDE SGRAAFSQVPNSEFIIEAETIIMALGTSPNPLILETTKDLQQNRWKGIATTSEFGETSRI GIFAGGDAVSGAATVILAMEAGKKAARKIDEYLQSML >gi|224531373|gb|GG658179.1| GENE 414 441664 - 442452 923 262 aa, chain + ## HITS:1 COG:FN0868 KEGG:ns NR:ns ## COG: FN0868 COG0037 # Protein_GI_number: 19704203 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Fusobacterium nucleatum # 6 259 21 274 277 404 77.0 1e-113 MKNILEIEESIRAGYRKKIWKKFVKAVQDFELIEDGDRIAVGVSGGKDSLLLCKLFQELK KDRSKNFELQFISMNPGFEAMDIDKFEQNLKDLEIDCTIFDANVWQVAFDQDPESPCFLC AKMRRGVLYKKVEELGCNKLALGHHFDDVIETTMINLFYASTVKTMLPKVSSTSGKLQII RPLVYVKEQDIKSFMKSNEIEAMSCGCPVESDKTDSKRKEIKILLEELEQKNPNIKQSIF SAMKNINLDYILGYTRGNKNDR >gi|224531373|gb|GG658179.1| GENE 415 442442 - 443188 981 248 aa, chain + ## HITS:1 COG:FN0868 KEGG:ns NR:ns ## COG: FN0868 COG0037 # Protein_GI_number: 19704203 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Fusobacterium nucleatum # 15 247 30 261 277 164 36.0 1e-40 MTDREILNFIEGKKFSKQLWSPIGRAMHKYHMIEEGDKIAVGISGGKDSLTTLNALIRIQ KIAQVSFEIIPIHIHPNTDKASYQKMKEYCEKLGLELVVETTNLEEILFNEENPMKNPCF LCGRIRRGILYRMLQERKINKLALGHHKDDIIETFLMNVFYQGNLHMMKPSYYAEEYGVQ VIRPLAFVEEKNIIRYVNRLELPVTKSDCPYEVSEQSRRLKMKNLIHEMTKDNPNVRSTI FSSIEDLL >gi|224531373|gb|GG658179.1| GENE 416 443198 - 443884 702 228 aa, chain + ## HITS:1 COG:PA2809 KEGG:ns NR:ns ## COG: PA2809 COG0745 # Protein_GI_number: 15598005 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 1 225 1 224 226 115 29.0 6e-26 MNILLIQRRQEFAKELKIAWKEKQHIVDIAGNYESGLQFFYAGHYDIILLDTWIKGGDAY LLAEKIRERSQKIGLIFLSEEHSFFFKKRAYEVGADMYLSLPISVEEVSLQVFALGKRVK AEAEYRKYCYLYGEIEVDALQRKVYRKGEDLNFTEKEFLLLTVLLKNQGLALHKDMIRKE VWGEDFAGASNILESYIKKIRKKLQDTEHKWIKTIRGYGYGIEERKGK >gi|224531373|gb|GG658179.1| GENE 417 443885 - 446389 3073 834 aa, chain + ## HITS:1 COG:FN0867_1 KEGG:ns NR:ns ## COG: FN0867_1 COG1022 # Protein_GI_number: 19704202 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Fusobacterium nucleatum # 6 609 5 606 606 654 53.0 0 MEGTVFLYDRQKTAIIYKEKEYSYKEMIEGIKYYATLLDIKAKDRVMVCLENRPESMMTL FSIWENKGISVNVDAGSTEEQLTYFIQDAEPKYIYASNKNIKNITNAVEESGLATKIINV DEVKIPEHFPVEEYSVKIEDETQTAVMLYTSGTTGNPKGVMLSYENIMENIRGVKAVDLV TETDRLLAVLPYHHIMPLSFTLVMPLHFGVLTVLLDDLSSEGLKKALKKYKISVIIGVPR LWEVIGKSILRQIQAKTLTKKIFEFAQKHVRSISLRKKIFKKVHTELGGNIRIMVSGGAK LDSEIGELFETLGFHMIQGYGLTETAPIVSFNVPGRERQDSVGEIIPKVEVKFLEDGEIL VRGKNVMQGYYKKPEATKMVIDEEGWFHTGDLGRMEGKHLLVIGRKKDMIVLANGKNINP SDIESELFKLTDFVQDIAVIEYEKKLVAIVYPNFDLMKARGIHNVNETLKWDIIDKYNVS APSYRKIHDIKVVKEELPKTKMGKIRRFLLPDLLKKQEQQGNSAEEVKKEIEIAAEYLEE YKILQEYLESTKGEKVYPDSHLEIDLSLDSLDMVELIAFLESNFGVKLSEEEFVDLKTPL AVVKAIHSRDKETISKDSSFKKILEECDDVTLPVSSWVGKFVHILISILLGLLFKIKIEN KEKLAREGAAVYIANHQSFLDVLLINKALSMKQIGELFYIATIIHFRGTFKQYLCNHGNV VLVDVNRNLRNTLKAAAKILKSNKKLMIFPEGARTRDGELQEFKKTYAMLAKELNLPIIP MVVKGAFEAMPFGQKPKWGSQMSLKALDPIYPEGKTIEEIIEESKRVIAEELKK >gi|224531373|gb|GG658179.1| GENE 418 446738 - 448096 824 452 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 1 450 3 446 456 322 38 2e-86 MEQAVVQVNEILWGSILIFLLMGTGIFYTFKLRFIQIRKFGQGIRRVTSGFSFHGKDADH NGMSSFQALATAVAAQVGTGNLAGAATAIASGGAGAIFWMWLSAFFGMATIYAEATLGQI YKTKVNGAITGGPAYYIQAIFKHSFFSRLLAYFFSISCILALGFMGNAVQANSIASAFEI AFHINPMIVGIVVAILSGLIFFGGTKRIASVTEKVVPLMAGMYIIICIVILILNYQNFFP ALQSIFVEAFTGRAAMGGALGITVQKAMRYGVARGLFSNEAGMGSTPHAHAIAKVNTPVE QGDVAIITVFIDTFVVLTATAMVILTSGLAFKGKTGIELTQAAFEMRLGQFGTVFIAIAL FFFALSTIIGWYFFGEANVKYLFHEKGNSITIYRALVMCMIVFGSMQKVGLVWELADMLN GFMVLPNLIALLLMSSLVKATSDRYEKRELKK >gi|224531373|gb|GG658179.1| GENE 419 448239 - 449459 1540 406 aa, chain + ## HITS:1 COG:FN1133 KEGG:ns NR:ns ## COG: FN1133 COG1820 # Protein_GI_number: 19704468 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Fusobacterium nucleatum # 26 406 2 386 386 480 65.0 1e-135 MKFLQKSIIISLRKNKNEIKFQTKGEAMILKNAKMVLFNRMFQGDLRIEGSSITNIEENL IPNTKEEVFNLQGKLLIPGFIDVHIHGADGADAMDGSVESLQKISKYLATRGTTNFLATT LTSSKEILKKVLACIGEVQNQEMDGANIFGAHMEGPYFDVQYKGAQNEKYIKMAGMEEIK EYLSVKKGLVKLFAMSPNSNNLDVIRYLVKEGVIVSVGHSASSFEEVMAAVEAGLSHATH TFNGMKGFTHRDPGVVGAVLNSDEITAEVIFDKIHVHPDAVRVLIKTKGVERVVCITDSM SATGLPCGRYKLGELDVDVVDNQARLSSNGALAGSVLTMDKAFRHLLELGYSLIDAVKLT STNVAKEFNLNTGMIRAGKDADLVVLDEKNEVAMTVVKGKIKYTNL >gi|224531373|gb|GG658179.1| GENE 420 449472 - 450104 756 210 aa, chain + ## HITS:1 COG:FN1762 KEGG:ns NR:ns ## COG: FN1762 COG3022 # Protein_GI_number: 19705081 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 33 210 65 245 248 96 37.0 3e-20 MILLSPSKEMSKDGIPSHKIPTFQKEAEELLPEIQEKDKYEAWSLYHGLAFRYLKKGEFS EKDLVFMEKNLCIFSALYGLLSAKDGISEYRLDFSKKGLYAYWGDKIYQELLKRCSSSEE WIINLASDEFSKTILKYLPKENKFLQIDFLEEKQGELKKHSTVSKKGRGAMARYLILSHD TSIERIKKFKEENFKFREDLSTEKHFVFVR >gi|224531373|gb|GG658179.1| GENE 421 450226 - 450999 318 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227550465|ref|ZP_03980514.1| ribosomal protein S4e [Enterococcus faecium TX1330] # 5 254 13 255 260 127 31 1e-27 MQTKENKFLEGQILDKILQCQEDYIFTNTNFLDLHQQNVAQAILHREKKRQRIKAVFWGG YEGAMRRILFFLPEYLEEYSYETFEDVLGVLEVTKLDKNLSLNHRDYLGAFTGLGLKRET MGDILVRENGADLIVLKEMIPILLEEYCSVGKSFVQVQEKSLKKLIFVEENQKKERGTVA SLRLDNVLCEIFNLSRTQAQEWIQKGSVYVNYVEKYKNESGIEAGDIIVLRGMGKAKIEE TGSFTKKNKVPIYYIKY >gi|224531373|gb|GG658179.1| GENE 422 451008 - 452159 1529 383 aa, chain + ## HITS:1 COG:SA1044 KEGG:ns NR:ns ## COG: SA1044 COG0044 # Protein_GI_number: 15926784 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Staphylococcus aureus N315 # 1 155 1 157 424 62 34.0 1e-09 MILIKNIDVYSPAFLGKRDVLISGNQIEKIAEKIECGNIEVEVFDGSGKKLVPGFIDQHV HLIGGGGEGGFHTRTPETPFSKLIEGGITTVVGVLGTDSTTRSIENLLAKVKALKNEGIT AYMTTGAYSVPSPTLTGSVEKDITFIEEMVGVKIAISDHRASYVDTPILEQIASQVRRAG MFSGKHGMVVMHMGDGREILNSVWNLLQHSEIPIHHFLPTHVNRKKEVWEDSLEFLKQGA YIDLTSSFEEDDFLSASQGIDFLKKNGYDLSRVTISSDGYGSAPVFDEGGRLVKITYSPV NTNYQEIKKLVQKYHFPLEEALIFTTKNPAMEFGWYPKKGSIQEKSDADFLILDENLSIF GVFALGEICMWEYEIRKKGTYEE >gi|224531373|gb|GG658179.1| GENE 423 452180 - 453226 1278 348 aa, chain + ## HITS:1 COG:BMEI1196 KEGG:ns NR:ns ## COG: BMEI1196 COG1024 # Protein_GI_number: 17987479 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Brucella melitensis # 11 347 17 339 349 179 32.0 9e-45 METNILHQVVGNVGQIILNRPKKLNALDRASVRELREILEKFAKDSEVCFVILRSNIEKA FCAGGDLLSDKKILEEEGLEAMVDELRAEYALASQITHFDKPILVYLNGITMGGGAGISV GADIRIVTETTQWAMPEMRIGLFPDVALSYYFARMQAGLGEYLAITSNSIQAEDCLWAGV ADYKIQSGDYTSLEKELLAMDWYGIEKEEILKKIQKKVEQYSSPKCIGNLEKRSKELKQY FTKSSFKEVFQSLEQEKETSDFARSILDSLNKNSTLSMAITWELLKRAKKLSLEECYQLD LVLIRSYFQGKDIFEGIRAILIEKTKDPKWEYKNIDGIPTEVVLSYFN >gi|224531373|gb|GG658179.1| GENE 424 454712 - 454981 489 89 aa, chain - ## HITS:1 COG:no KEGG:Ethha_1384 NR:ns ## KEGG: Ethha_1384 # Name: not_defined # Def: glutaredoxin # Organism: E.harbinense # Pathway: not_defined # 1 88 1 86 87 80 43.0 1e-14 MKKLYMFVTSWCPHCKNAKNWIQELKAENPKYETIPLEIIDEEKEVNKVNELNFDYYYVP TFFLEDEKLHEGVPSKEIVKSVLDKALQS >gi|224531373|gb|GG658179.1| GENE 425 455104 - 456657 507 517 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 441 1 408 458 199 31 1e-49 MKKYDVIVIGTGAGNILTDAALDSGLKVAQIEKDKFGGTCLTKGCIPTKVMVTAADMIRN NEEVHKIGVESQPMKINWEVLSRRVWQKIDESKEIVEEYKQEKNLDVYEGRAFFVRDKVL QVEYNQGGFSEEITADIIVLAAGARSRRIKLQGMETTSYLTSEDIFGASWPQKSYKSLII VGAGAIGTEFAHAFSSFGTKVTVVQFEDRLLPKMDKDISKYLGERFADLGIKVHYNQISK KIMKKDGEKVLQIEDKITGEIKELKAEEILVAAGVVPNTDLLELSNTSIQMNAQGWIRTN EFLETSVEGVYAIGDINGHGQLRHKANYEADILVHNLFPEALPPGQVAEGMKPERRFARF EYIPSVTYTYPQVSSIGLSEEEARKQASEKGWDIRVGYHHYSSTAKGYAMGFEPGDKEDG FIKVIIDAKSKYILGVHIIGAEAGILLQPYASLLGSGRIEHLVYEQEIGSEETKKARATD YSRYLDPHKVTSITEAMTAHPALTELVMWTQYFVPMK >gi|224531373|gb|GG658179.1| GENE 426 456702 - 457073 194 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 1 119 1 123 126 79 36 2e-13 MKFQFIHENFNVMDLEKSLKFYEEALGLKEGRRKEAADGSYILVYLRDGITDFELELTWL KDRSENYDLGDEEFHLAFRVDDYEAAYKKHKEMGCIAYENPSMGIYFITDPDGYWLEIVP TRK >gi|224531373|gb|GG658179.1| GENE 427 457102 - 458865 244 587 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 347 568 131 351 398 98 29 4e-19 MKSREYSTKELIARFLPYFSKYKHILLFDLTCAAFTTLCDLALPLILRFITQTGMKDLSL LSIQLILQLGALYIVLRLVDTSANYFMANVGHVMGAKIETDMRRDVFNHLQGLSYSFYNE NKSGQILTRVTTDLFDVTEFAHHCPEEFFIAGIKILISFIILININVPLTLLLFAMIPLM ILSVYKFNQKMRNAQKDQRNHIGEINSGIENNILGAKVVKSFANEEIEKEKFEVQNQQFL GIKKVFYKYMASFHAVSRLYDGLMYVTVIILGGIFMLQGKLSPADLFLYALYISTLLSTV KRIVEFMEQFQKGMTGIERFLELMDTETDVEDSENAKSVNNVKGDIAFEEVGFRYQSTGE SVLEHLNFSIEAGKNIAIVGPSGVGKTTICNLIPRFYDVTEGVIYLDGTNIKELKVQDLR QNIGIVQQDVYLFSGTVFENIEYGKPGASLKEIERAAKLAGAYEFIDALPEKFNTYIGER GTKLSGGQKQRISIARVFLKNPPILILDEATSALDNQSEKIVQTSLELLSKGRTTITIAH RLSTIMNADEILVLTEQGIVEKGKHQELLDRHGFYHELYYGNQWSQK >gi|224531373|gb|GG658179.1| GENE 428 458984 - 459319 346 111 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466223|ref|ZP_05630534.1| ## NR: gi|257466223|ref|ZP_05630534.1| hypothetical protein FgonA2_02125 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 111 1 111 111 186 100.0 7e-46 MKPRVTWILFLVIFIFSSCMSRWAFISETDYTKREEQIVKIYEKLSKKYDRLLEDPIEEK ERKALEEKFQTFYMNLNELTVKNDPKHLQFLKEYRNHVRIKLNYLQDLKED >gi|224531373|gb|GG658179.1| GENE 429 459327 - 461060 1978 577 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_0658 NR:ns ## KEGG: Ilyop_0658 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 1 574 1 575 575 686 56.0 0 MKQEATINRDSIVLDFSTKFCNSHEALLESDGFRRILTTYLAKLETRDTPVYEYLLEAVG TKEEIPDRVTKLFKLLIILDLEEVHILDQKYSVLLKDKSIFIEFLEGLYNFWRKFERYAI ISNNTRGEGLQNVNFIEALNNFKNLVITTYRLIEEALMGYKNRVYRQLNAGVNAGVILNG ANRNCPAEYSILEKIPFIDTVILQPPFITYPKRNTRKGIFQEVFENPIKDMVINRDNWFC YPAKVGESLVFIYFNRYFMSQGLSLCNLFELAKEEEYVNKAPDIIYVYGVKDYETEMKTV FYRDKENNRMVGYANYCEDIDYFGYMKKMILTLHNIRMIEQGHLPIHGAMVNITMKSGAV HNVVIMGDSGAGKSESLEAFRSLSEEYVKDMKTIFDDMGTLKLASKAPLAYGTEIGAFVR LDDLDTGYAYKEIDRSIFMNPDKINSRIIIPISSYEEIMRGYPIDMFLYANNYEAEGDLI EFFKKKEEAIPVFKAGRRKAKGTTSETGIVDSYFANPFGPVQTQEKTDILIENFFEDMFK KGVKVGQIRTKLGIAGEEHSGPKAAATVLFEMLKPLK >gi|224531373|gb|GG658179.1| GENE 430 461063 - 462379 1058 438 aa, chain + ## HITS:1 COG:CAC0883 KEGG:ns NR:ns ## COG: CAC0883 COG0534 # Protein_GI_number: 15894170 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 1 407 7 418 448 216 31.0 5e-56 MEKKSINRLFLEYMIPSTTGLLVTALYVIVDSIFIGRGIGQNALASLNIAYPIITVSSAI SLMIGMGASTVMTLHAGKKRIRELSLSYVLFFNGFFYLFLIFLVFCFPKFLMELLGSTPE IDNMVKTYISFCSIGLIFLMISTGLNAAVRNLGSPRYAFFSMVMGALCNVILDWLFIFVC GFGIAGAAVATSLGQILSFFLLYCYLRKREIRFSFWPKRFQKQMIEKIFSVGFSSFIMEF AHAVMLVLFNKQFVKYGGEISVAAFCIVASTFYLFRMVFTGLSQGLQPILSYFYGKKDYT FVREAYQKARILSILIGMIGFLICTIWKREIMGMYHSDPDFVSLSANGLFLYVTSMIFVA FNFIVIAYYQSIGDGRRAIFFSFIRSAIFLIPYLYILPIFIGVKGIWLTLTCAEISTTIL MLFFEKKNKIQLDRKLLL >gi|224531373|gb|GG658179.1| GENE 431 462704 - 463507 975 267 aa, chain + ## HITS:1 COG:NMB0829 KEGG:ns NR:ns ## COG: NMB0829 COG0286 # Protein_GI_number: 15676726 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Neisseria meningitidis MC58 # 1 251 2 246 514 301 60.0 8e-82 MNETTQRAELHRKIWAIADNVRGAVDGWDFKQYILGILFYRFISENMTDFFDSAEQEAGD LEFRYAELSDKEAEMDFRPNTVEDKGFFILPSQLFENIVKTARTNENLNTDLANIFKAIE GSAVGFASEDDIKGLFEDVDTTSNRLGSTVAEKNKRLADILTGIASINFDDFKNNDIDAF GDAYEYLISNYASNAGKSGGEFFTPQTVSKLLARLVMEGKETINKVYDPTCGFRVIIMTQ ANSQVNTRLLELLPKLKTKKLSGWCAV >gi|224531373|gb|GG658179.1| GENE 432 463565 - 463846 89 93 aa, chain + ## HITS:1 COG:no KEGG:SZO_12981 NR:ns ## KEGG: SZO_12981 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 93 1 93 93 79 64.0 4e-14 MRIILKIILFPVSLVLSILTAFLTFLLGIGTTILYFLMSFCVIGSIASFIYHDTVTGIQA LVIAFLVSPYGLPMIGAFCIALIEAVNCKIRAI >gi|224531373|gb|GG658179.1| GENE 433 463843 - 464397 630 184 aa, chain + ## HITS:1 COG:SP0939 KEGG:ns NR:ns ## COG: SP0939 COG4283 # Protein_GI_number: 15900819 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 13 184 1 172 172 267 85.0 9e-72 MNSKLETCGGDILRTYKDKEELKNEINKSFEKYISEFDDIPENLKDKRADEVDRTPAENL AYQLGWTTLVLQWEENERNGLKVKTPSENFKWNQLGELYQWFTDTYAPLSLNELKVKLNE NIDSIYEMIDTLSEEELFKPHMRKWADEATKTAVWEVYKFIHVNTVAPFGTFRTKIRKWK KIVL >gi|224531373|gb|GG658179.1| GENE 434 464446 - 464952 194 168 aa, chain + ## HITS:1 COG:no KEGG:Apre_0714 NR:ns ## KEGG: Apre_0714 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 166 1 166 168 207 70.0 9e-53 MDFIRAILDGIAIAAIFNGIVASLVLINPRLFFDSYPKSIQKSAPKQMTKQEKKINTILT IIIVGICFVYSTISLLHSGVVGFWNIFWMGYIQWSILNAGDFLLLDCLLFQGKYKEKIVI PGTEGHKDYEFKNWMKCLVIYEHFLLVPFLLIPIISAIQAVIVIFLWK >gi|224531373|gb|GG658179.1| GENE 435 464987 - 465121 175 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466230|ref|ZP_05630541.1| ## NR: gi|257466230|ref|ZP_05630541.1| hypothetical protein FgonA2_02164 [Fusobacterium gonidiaformans ATCC 25563] # 1 44 1 44 44 76 100.0 5e-13 MKNKKLPVFGVGPAYVICCFILTVVGIAIRNTGFLKQGNLQGVK >gi|224531373|gb|GG658179.1| GENE 436 465274 - 466044 545 256 aa, chain + ## HITS:1 COG:no KEGG:SEQ_0730 NR:ns ## KEGG: SEQ_0730 # Name: not_defined # Def: replication initiation protein # Organism: S.equi_equi # Pathway: not_defined # 1 256 25 283 283 258 57.0 1e-67 MNFDYFYNRDGDRFSFFMLPKVLVTDEAFKGLSSDAKILYSCLLERTNLSYKNKWIDDEK RVYIIFTVEEIMTMLNKSNKTAVKILNELDSNTGGIGLIERKRQGLGKPNIIYVKDFMSI FKSECNNYTSEMKNLHLRNVETTLQEVKNLHRSNTYNNNLNYSNTDFSICKGEYGTFQNV FLTDDEVVDLKEILMNQFDNYIERLSTYIKSTGKNYKDHKATILSWFYKDQGNQNQKKNT KNKSYSLEDYEIGEYL >gi|224531373|gb|GG658179.1| GENE 437 466041 - 466889 402 282 aa, chain + ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 45 276 40 281 282 108 31.0 1e-23 MMNKLKELLIDGAKYNYDPDTEYIKDGHAYCKVCNERKDGEVMDIFGSKKIFKKQCECDR NRLKKEAERKKWQEIEDLKKRCFNSMNQWAYTFDNYQGGKEQCFTVAKNFVKEYETMKKE NIGLLFFGTVGSGKTYLACSIANALIEEYQIRVKIRNFAQIINDLQKGGFDFDKNEYIES IVSVPVLILDDLGIERDTSYAKEQVYNIVNSRYLKNKPTIFTTNIPIEQIKNSDDGVEYE RIYSRIMEMCIPIKVTGEDFRKKVQKRKLERNRERLLGGGER >gi|224531373|gb|GG658179.1| GENE 438 466889 - 467377 539 162 aa, chain + ## HITS:1 COG:no KEGG:SEQ_0732 NR:ns ## KEGG: SEQ_0732 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_equi # Pathway: not_defined # 1 162 1 161 161 123 70.0 2e-27 MINEEVSSKVINLEIRLAKLTAREIVKLLKKLLKEAEKMGGDLDAYLKNKGNQVKLKDMV KKGQLEEINVKDGELKELKKELNKHGVKFSVMKDKETGTHSVFFQAKDTKVLNKAFQNVL SKIEKKEKNKESIHKSIEKFKEMAKNSVSKDKVKNKQKEQSL >gi|224531373|gb|GG658179.1| GENE 439 467374 - 468720 1405 448 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 150 448 157 445 591 167 34.0 4e-41 MIDKILKDIKGLFKVQDKAKFLKQNIPYLAFFYVGNIFSHHVRAYTGGDVIDKIFQGILE LNTMSFIPSIHPTDILMGVGVAVLIKFIVYTKGKNAKKFRQGKEYGSARWGESKDIAPYI DPKFENNVLITNTERLTMNSRPKNPKYARNKNVLVIGGSGSGKTRFYVKPNLMQMHSSYV VTDPKGTLVLECGKMLYENGYDIKILNTINFKKSMKYNPFAYLRSEKDILKLVQTIIANT KGDGEKAGEDFWVKAEKLYYTALIGYIYYEAPEEEKNFKTLLDMIDASEVREDDETYMNP IDRLFEALEKKDPTHFAVKQYKKYKLAAGKTAKSILISCGARLAPFDIQELRDLMKEDEL ELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDEYGGRLPVHVRCLLDE FANIGLIPKFEKLIATIRSREISASIIL >gi|224531373|gb|GG658179.1| GENE 440 468744 - 468896 74 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALDLVSDVLYRSMVSLPSVSDSSLSVVFSFPPRNKVLSQLPTIVSALSL >gi|224531373|gb|GG658179.1| GENE 441 468937 - 469155 125 72 aa, chain + ## HITS:1 COG:no KEGG:CD1849 NR:ns ## KEGG: CD1849 # Name: not_defined # Def: putative conjugal transfer protein # Organism: C.difficile # Pathway: not_defined # 1 72 508 579 579 133 90.0 3e-30 MSQDEITVMDGSKCIFQLRGVRPFLSDKFDITKHKNYKLLEDYDKKNVFDIEEYIRRKGK VKMNRNTVITRL >gi|224531373|gb|GG658179.1| GENE 442 469255 - 469866 382 203 aa, chain + ## HITS:1 COG:no KEGG:HSM_1181 NR:ns ## KEGG: HSM_1181 # Name: not_defined # Def: hypothetical protein # Organism: H.somnus_2336 # Pathway: not_defined # 12 203 1 192 192 352 96.0 4e-96 MLENLKLLKQDMERLDWTICSFIFNYKGIEYIVLVKRFVENEPRENKYALVKLHFMRSND LTNDLVCEANSHSLLVDTRTMREYFEIEYAENLGDILSRFTDYFGRYIPISVPNHISEIE KISMVNSLSISDAEDPRKIYCRNVKRNPEGQKRSMFNADKAKFLRKSLFEHFKNDKSVSF CFSIYPEKENDDAEILKKFAINN >gi|224531373|gb|GG658179.1| GENE 443 469940 - 470779 580 279 aa, chain + ## HITS:1 COG:RSc2614 KEGG:ns NR:ns ## COG: RSc2614 COG4271 # Protein_GI_number: 17547333 # Func_class: K Transcription # Function: Predicted nucleotide-binding protein containing TIR -like domain # Organism: Ralstonia solanacearum # 134 275 84 230 233 118 44.0 1e-26 MYYQVLVEIKEKIGKSNQNKEITVLDVESRDEVLNDIVIPYLNNEEFVFNGYMLNKREIN RLKVMTTEQTVRSLSQYENDNMPQGLIMYVSPNDILTYDKYVTDVTKELLDEGKKTQHTI LDRHKDEIIEKDKNKVFIVHGRDNETKQEVARFIEKIGFEPIILHEQSSSGMTIIEKIEK YTNVGFGIVLYTPCDKGYEKDSPKEIKSRARQNVVFEHGFLISKLGRNNVCALVKDDIEK PNDISGVVYITFDSNGGWKIPLAKEMKSSGYEVDFNLFM >gi|224531373|gb|GG658179.1| GENE 444 470967 - 471278 404 103 aa, chain + ## HITS:1 COG:no KEGG:CD1851 NR:ns ## KEGG: CD1851 # Name: not_defined # Def: putative single-stranded DNA binding protein # Organism: C.difficile # Pathway: not_defined # 1 91 1 91 103 132 92.0 4e-30 MKQGMININANLLAEPTFSSFDKDGEAVEVANFTLVKKYGKGKEYINCAAYGEKAETAKA FEKGDLIHIFGYFKKREKDGKTYKNFVVKSYNKIEKKEENEEE >gi|224531373|gb|GG658179.1| GENE 445 471282 - 471497 443 71 aa, chain + ## HITS:1 COG:no KEGG:CD1852 NR:ns ## KEGG: CD1852 # Name: not_defined # Def: putative conjugative transposon membrane protein # Organism: C.difficile # Pathway: not_defined # 1 71 1 71 71 106 97.0 4e-22 MEFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGL KLIPLLSNVLK >gi|224531373|gb|GG658179.1| GENE 446 471510 - 472373 896 287 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1789 NR:ns ## KEGG: CDR20291_1789 # Name: not_defined # Def: putative conjugative transposon membrane protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 287 1 287 287 471 91.0 1e-131 MFGIFDKIEEFFKELLLGGIQANLESMFIDINDKVGAVATDIGKTPMGWNSEVFNFIKSI NDSVIIPIAGLIITAVLCIELINMVMQKNNMHDTDTFEFFKYMIKMWIAVWLVSHAFTFS MAVFDVAQHLVNQAAGVINTSATVSGDQIVQMVEGLKDKGLGELVMILFETSLVKVAIQV MSVVIMLVVYGRMFEIYVYCSVSAIPFATMGNKEWGQIGTNYIKGLFAIGLQGLFLIICL GIYAVLVKTIKITDIHASTFMILGYALLLGLMMLKSGTLAKSVLNAH >gi|224531373|gb|GG658179.1| GENE 447 472386 - 472652 293 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466239|ref|ZP_05630550.1| ## NR: gi|257466239|ref|ZP_05630550.1| hypothetical protein FgonA2_02219 [Fusobacterium gonidiaformans ATCC 25563] hypothetical protein HMPREF0813_01369 [Streptococcus anginosus F0211] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] hypothetical protein HMPREF0813_01369 [Streptococcus anginosus F0211] # 1 88 1 88 88 147 100.0 3e-34 MIEVKKKLFPVSIIAVGIGAFAISIFNRNKLKNLEDEVKSTRDDVKSILCYQEQKNAFIE SELEEMRNEVASCYEHFEAFSKEKEDGR >gi|224531373|gb|GG658179.1| GENE 448 472656 - 473054 373 132 aa, chain + ## HITS:1 COG:no KEGG:SZO_12870 NR:ns ## KEGG: SZO_12870 # Name: not_defined # Def: conjugative transposon membrane protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 120 1 120 129 183 86.0 2e-45 MGYVPIPKDLKKVKTKVAFNLTRRQLIGFTLAGLVGIPVYLFMRKFMPNDIAILFLIVST LPIFFVTLFEKDGLTFEKYFKHIYLHKFYQPQKRVRKEVYLEQEKKNTANSVRKKSKAIK GKQKKPEKRKVD >gi|224531373|gb|GG658179.1| GENE 449 472957 - 475389 1295 810 aa, chain + ## HITS:1 COG:CAC2047 KEGG:ns NR:ns ## COG: CAC2047 COG3451 # Protein_GI_number: 15895317 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Clostridium acetobutylicum # 280 780 66 594 617 106 23.0 2e-22 MNKKRKIQQIQLEKNQKLLKENKRNLKKEKLTKQKKKASLIDLIFKKEPKRYTVEDTIPY MRMLKSGICQLDEKHFNKCIAFQDINYQLALEEDKDLIFNQFANVLNSFDPSVDIEFSYI NQLGRNNELKAAIQIPDKNDGYDDIRLEFREMLKSQLAKGNNGLKKSKYITFGVEADSLE QATAKLERLEIDILSNLKSMGVRAEGLTGTERLKVLHDILNPDKLFSFSYKDLKPRESTK TVITPNSFNFVPSKYFKFGKYIGAVSHLQILASELSDRMLAEFLDIDDNINISFHIKAVE QTEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLITYGDNIKMLLKDLQTRDER MFIVTIVFMNFARTVQKLDTTISQILSIASKHNCKIKRLDHSQEQGFVSVLPLGVNKIEI DRGLTSSSTAVFLPFTTEELFINSSNSLYYGLNALSHNLIMADRKMLKNPNGLILGTPGS GKSFSAKREMANAILTTDDDVIICDPEGEYGNLVKQFKGEVIKVSAKSKDYLNPLDINMN YGDGDAPLKDKANFIMSMLELVVGGSGLTAEEKSVIDRCLPRIYEKYFENPIPENMPILQ DLYNMLKGQEEKVGKKLATEMEIYVSGSLNVFNHQSNVDLNKQLICFDIKELGTQLKKIG MLVIQDQVWNKVSQNRNTGKSTRYYIDEFHLLLKDEQTSQYSVEIWKRFRKWGGIPTGIT QNVKDLLASKEIENIFDNTDFILMLNQATGDRDWLVVKLKISKDQEKFVTNSRAGEGLIF FGNTIVPFVDNFPKDTILYQKMTTKPEEVR >gi|224531373|gb|GG658179.1| GENE 450 475396 - 477690 1892 764 aa, chain + ## HITS:1 COG:no KEGG:SEQ_0743 NR:ns ## KEGG: SEQ_0743 # Name: not_defined # Def: membrane protein # Organism: S.equi_equi # Pathway: not_defined # 139 764 67 707 707 731 64.0 0 MSKKRKRDLNEKLRAREEKIITKAETDDVLDYKRKTRDDYRDKVVKEENRFQDKIHEKIS KRADINSEIKTSNKSKNAIKRNLQSNSFETDSGMKPIVESPEKNQSIEVNSDAYRVFENT ASKETHRNIEVGNTNNGLNIQSVNVNKRKHSKKLVSDFAETEVAKSDYQTEVKENRIYDP LAKDQDGDGVIDRYDNDFRDSDVSYEPLGNKKSKLYEKQKRSLKRKNYSDKLFTRKGTDK KKEDNTKASKTGKEAIKDREKKNQLYKRYNKETIVGGSVIGAAKLGEVTGTYLSSGSDEN ASVEAAEKGLGSSSKLIHCVKNYSDKRKSKKLYDLEKSDRKIQSRKSKLEFRKSMDEVKK TDQYKKANAYKKFQKKKQMKSAIYKQNKTRIRDRVKKTLMDTFKVSKDFIIRKAKVAAIV VAAIIIFGTFVFNFASMTMGGFANSTSSILTTSYLSRPNVLTEINQSFSNKENDLYSELE NIEKNNPGYDEYIINKNGDIGHNVHELLSYITSRCGEVKSLSEVSNILDDLFKTMYHVDY KEEIEIRYKTVTETYTDEEGNEHTESHEEPYEYRKLIVTLNKREMDSVIREVFRDYPDNL KHYEALFLAQGNMGEMFGNTNLITENGGIGGGKEYEASSDVQKKIVNAAYITPSPGAGWC AMWVSQVYQNAGLGYIGGNANDMYRNHTFTSDRSKLKVGMLVAVESSSSGGQAGLTYGHV GIYIGDGKVMDNIGVVRVTTLDDWIATFCKHHPVGFGFPPNVNR >gi|224531373|gb|GG658179.1| GENE 451 477703 - 477939 344 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKELKLTKNKIKKLLDKKALIDKELEPLFIREEELENEEIIVICRENNITLEDLMRKVK EEKKQKQEKEFNDEKFVE >gi|224531373|gb|GG658179.1| GENE 452 477920 - 480136 2203 738 aa, chain + ## HITS:1 COG:no KEGG:CD1858 NR:ns ## KEGG: CD1858 # Name: not_defined # Def: putative cell surface protein # Organism: C.difficile # Pathway: not_defined # 276 738 52 523 523 345 55.0 5e-93 MKNLLSNKKILASILALLVLVGLVATVYLNKSNIVYAMGADNNHGQYKTKFIVNMIDNTS NQNISKAYYEDKLKFKINILKEFKLEGNLTSFDRYDEMFTEADFDTERTGNTRFTSKKEF NYYKATGVNIGSGIFLDFIENNQDYYVGSIEEHIRTYSDNKIYHILDTPVYKLNRDIVKT KIDYDGEIKEESKKEIIKKVKEANPNINNLKEIKIEKDKLIIETWNRYHTGLPYITFNVD DLITRVTSVDTQTDKTEKKDSSVQTDDKSKKDSATQTKAEVKVKYFFEDGKVYKEFTKTF DVGYVLDASELDMLPDNMKFLDDFATYKVKGKDDEIIRKVSYLNKDENTQTEKDIKDSAT QTEEKKKKDVSVQTVLTGKDIEKLEKNLKAYEKEMDKLNKELKDKADISNDKKEEINKLN DKIKSLEEKLEKRKNEKIKGISDKDILKLKDRIRGLESKIDTLKNTSSSTGNAPSKTVTS NSNPFTSGKGTQTGSEKQIASNSATKKGNTTSENTGKKEEKQEIRYPNKLTPKQTSSNGD TSSMDGTSKSVNTNKGVASAPSKARGSVTENKDNANKDYPIHHNDGKDNKSTDMYSADAR QFVTFTTKNGKTFHLIINHDEDSENVMLLTEVSEDDLLNMVEKKEAPKQEITKEEPKKKE VKPVKKEEKSSMGTYIILLLAVGGALGAGYYFKVVKKKENEELEAFEEDDDSFFSEAEES ENEEDEVETEDKEDDELE >gi|224531373|gb|GG658179.1| GENE 453 480230 - 481936 1304 568 aa, chain + ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 3 563 5 591 709 407 43.0 1e-113 MKLVIAEKPSVALSISKIIGATNKKDGYYEGNGYKVSWCVGHLIQMANPDSYDEKYAKWN MSDLPIIPREYKYVVSKATKKQFNTLKKLMNDKDVDTVVNACDAGREGEAIFRLVYNEAH CKKKMERLWVSSMEDSAIKEGFDNLKDGKFYDNLFESAQARAIADWLVGMNISRFYSCLY KQNYSVGRVQTPTLSMIVNRDEEITNFKKEKYFTVELSLNGFTLSTDRIDDEITAEQLLN LVGDKIEITDVIQKEKITKPDLPFDLTTLQRECNKYFGYSAKQTLDYAQSLYEKKFITYP RTDSRCLTEDMITSTINNILGKNDFDTERIKVVFNSKKVTDHHAIIPTTSGMNEDLISLP ESESKVYRLILNKFHASVGYPLIENTSKIVAEFDSFEFTSSGKVIKDDGFTKYLKEYKSK KNEDTLLPDVSIGDVLSVENKEIKEKYTTPPKHFTEDTLLKAMELAGNDALEKDVEVERK GLGTPATRAGIIENLIYKGFVERDKKNLIATHKGISLVTIVADTFKSAKTTANWEMQLSD IASGKEDKEKFLNSIEEEIKNTISTYKK >gi|224531373|gb|GG658179.1| GENE 454 481960 - 482955 784 331 aa, chain + ## HITS:1 COG:CAC1222 KEGG:ns NR:ns ## COG: CAC1222 COG0270 # Protein_GI_number: 15894505 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Clostridium acetobutylicum # 18 329 7 306 314 284 47.0 2e-76 MREILFLFLLEVVEIETIKIIELFGGIGAIRKAFIRQKIPHQVIDYVEIDKNCVKSYNAL YNTDFKPKSILDFHPPDERIDLLMHGSPCQDFSRSGLKKGGEKGSGTRSSLLFETIRIIE EMKIRPKIVLWENVKGVLDKNMRASFFHYLKEMERLGYENKYEILNAMDFGIPQKRERIF VVSILGNNSFDFAKLEKTQTRDISEFIEKDASNLYEVRQESMLSHIRGEPKNNNFRGRLK VIDKFAYTISTKQARIPNSGIIDIGNGKYRYLTERECFRLMGFDDEDFDTLRAIYKQRKG TTSSILYKQAGNSIVVDVLEAILKEIMRKKK >gi|224531373|gb|GG658179.1| GENE 455 482952 - 483338 385 128 aa, chain + ## HITS:1 COG:no KEGG:SPG_1290 NR:ns ## KEGG: SPG_1290 # Name: not_defined # Def: Tn5253 hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 113 1 113 149 80 39.0 2e-14 MKRLTTYSILTSSDDKEEQHMKEVEAIFSKIYGLVNYLCVYDISYIDKYHSKIIKPKSEY NELHNFEEILEKTDFKNGIDIFLDDEDTLVFIVYGQGYKYQDEYSLVTTKVTVSTIGKFE AFAEFIKI >gi|224531373|gb|GG658179.1| GENE 456 483423 - 484028 344 201 aa, chain + ## HITS:1 COG:no KEGG:MARTH_orf136 NR:ns ## KEGG: MARTH_orf136 # Name: not_defined # Def: hypothetical protein # Organism: M.arthritidis # Pathway: not_defined # 1 201 1 201 201 277 73.0 2e-73 MDSITNQIETIMSENQGKIFSINDFYDLGTKNTIKSILYRLNEENEIARLLDGLYTKPKY SKILNEYSYPDASAVAEKIADKFSWTIAPTGDTALNYTGLSTQVPNEYVYISDGAYREYL YRDKKIIFKHTTNRNITSYSKELSILIQAIKALGKDNISEEDIKKLAVFAKEIQEDLIKD TLKLPFWIQEVLNKIQEINHE >gi|224531373|gb|GG658179.1| GENE 457 484021 - 484263 307 80 aa, chain + ## HITS:1 COG:no KEGG:MARTH_orf137 NR:ns ## KEGG: MARTH_orf137 # Name: not_defined # Def: hypothetical protein # Organism: M.arthritidis # Pathway: not_defined # 1 80 1 80 346 122 82.0 7e-27 MSKLLKISSEELELVIQNTSDKLSMSKAIVEKDLWVCMILKYLFKDFKYKDAIVFKGGTS LSKVYKLIERFSEDIDLALD >gi|224531373|gb|GG658179.1| GENE 458 484408 - 485028 333 206 aa, chain + ## HITS:1 COG:no KEGG:MARTH_orf137 NR:ns ## KEGG: MARTH_orf137 # Name: not_defined # Def: hypothetical protein # Organism: M.arthritidis # Pathway: not_defined # 1 204 130 333 346 270 66.0 3e-71 MLRGKDYKFYIDEFDGQTICFDYPKNHKDSSILQVIRLEIGSLAEPIPASRRKIKTYIEE VYPEVFDENIQVLAVDSLRTFYEKITILHREANRVNGNYPTRYSRHFYDVYKMLLTDIKE KSFDNLDLLKAVIEFKKKFYACNWAKYDDIMEGNIKLIPSDEALETFSKDYDSMKNMLFG EKISFDRIISSVKEYEIELNKVLENK >gi|224531373|gb|GG658179.1| GENE 459 485101 - 492075 4811 2324 aa, chain + ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1252 2322 2 1055 1315 555 32.0 1e-157 MRTNDFYNIIELVKRDVLDSENEYLKLLKVIGNNQRYDFLSQLSIYDKNPNATACASFDM WRERFNRTVMRGQKGIPILSETYPFQKVGYIFDISQTVSMDRGVNEVKLWEFDREKHEEA LKDMITLRGFEASDKLSENIYSLSRVYADDSIYELCNNLRISDEDRNSFVNFMRNSISYA VSNRFNLDYPIGMDNLKENFRTLDSISLMSVGACISKACDNIIEATMVRTRNLSVNQDLT KGISADYNIDNEKNSLGGIKNVIRSNDQRDDDTRNRILGNGEYGRDNFKNQGEDLEQSGK REELHEGISKSDLRSDETGLSYRNERGETLSDANRPLQGEEITNASNGSTEKSNPFYERG KTEDDGSLEDNGRESSRVQGDDFSPKRDGDKGNSRSIENSIEDMNEEAENASFFYSKEDP YNLMTDEMLERVPELYEQEKISLAEKEVHAAYIIPFRSNWTWYMTEYDRESGDAFGLVLG IEPEWGYFNINELKELNAQRLILEDFPKTFRELKYTELKKQMDEQELQMVFNGELSFEDD VIHKEINNEVIEEFEEELSPNFAEEVGSIMEEYEVSRDIAISRLTTSKLEEALQGTNIKL SDFNSEQLEEIMSAIKEYDFYGNEITEIADPKLPVWKMEQLKWLIDDWNKDTNGVTSEKI KYLKDLDIKLAKFNVLKGYLINDDVSISQIEEFKDNIDFVTMSEFVDSLKEYSYNNQNEK VAIKVGNEFILASKQDSLEISLEDTGRKVVVDGVEYSLNRGVDFEESTKVDTLIDSGKYE AYKIADYVVEATQVEAKQETLFDYLNPEEDKEKSLDLSVGKMVYMDHEAYKIDDEVSFNE ILKKNDLRLAPLRNGNHMMPIVSFADDKELLEKISFDRPKLLVGDEVHYKDKDYTITRFD EMGGGLKTVTIKDNVEYLGGMITGSEVIPYRLESDLERLFGLEEKKQEKVSNFRIKEDIL PDKLAPSERLNNNLEAIAMLNRIEKGERDLDVTAQETLAKYVGWGGLADVFDESKDGQWK EARAFLKENLSSSEYEAAKESTLTAFYTPKIVIDGVYSTLSEMGFKNGNILEPSMGVGNF IGNLPDEMSKSKFYGVELDSVSGRIAKLLYPESDVQVKGFEETSFSNNFFDVAIGNVPFG EFKVNDREYNRNNFLIHDYFFAKSIDKVRNGGVIAFITSSGTMDKKDESIRKYINARAEF LGAIRLPNDTFKGVAGTEVTSDIIFLKKRDSVLERDDDWVHLAEDENGLTYNKYFVDHPE QVLGSMREVSGRFGKTLTCEPIAFLGQENNMESLKDRIEIAGERISKDAKYEEIELLDDE VTSIPATDDVKNFSYTLIDDEVYYRENSLFIKREVSDKNKEKIKDYLELNEALKDVIYKQ KEDFSEAEIKESQDKLNVVYDSFSKKHGFVNNLSNTRALREDSNFPLVSSIEILDEEENF KEKGDIFSKRTITKAKVIDHVDTSLEALVLSISQKGYVDFDYMTNLTDKDRNTLIEELRG EIFLNIREENVGFNQKISFDLEDGDLPFACSDESNSFKYAYVTKDEYLSGNIREKIEIVD SYINRLLQAERMLPEESENERKTLVNELSRLEYQKAELQRVMPKELEASEINVRLGATWI PPKDIERFIFETLKTPGYARWDIKVKFSHLTSEWNVEGKSKDRGNDLAEMTYGTSRVSAY KLIEDALNLKETKVFDQLLNPDGSKTSVLNKKETMLAGQKQELIKEEFKNWIFNDVDRRT RLVKAYNERFNSIRNREYDGSNLSFDGMSTDITLRNHQKNAIARILYGGNSLLAHVVGAG KTFEMVASSMEAKKLGMCTKSLFVVPNHLTGQIGREFMQLYPSANIMVADKKDFEPKNRK RFIGKIATGEYDAVIIGHSQFEKIPMSKEYQQKHIQDQIDEIINYVEEYKHDRNQNFTVK ELQKTRKKLEARLEKLNDDFKKDDVITFEELGVDKLIVDEAHNYKNLYLYTKMRNVAGIG QSEAFKSSDMFMKCRYMDEMTGGKGIVFATGTPVSNSMTELYTMQRYLQYDALKKNGLEH FDSWASTFGETQSAFELSPEGTGYRVKTRFSKFYNLPELMSMFKEVADIQTADMLNLPVP KAHFEVIKTEPSDEQKEILKSLSERADKVRNKSVEPEEDNMLKINNDGKKLALDQRLINP LLPDDENSKVNVCVKNVFSIWDKTKENKSTQLLFSDMSTPKGDGSFNIYDDIRDKLVKLG IPKEEIAFIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIAMHDLDVPW RPADLEQRSGRIVRQGNENKEVSIYRYVTENTFDSYLWVRHEVA >gi|224531373|gb|GG658179.1| GENE 460 492631 - 494301 1270 556 aa, chain + ## HITS:1 COG:MA3645 KEGG:ns NR:ns ## COG: MA3645 COG3344 # Protein_GI_number: 20092445 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Methanosarcina acetivorans str.C2A # 13 450 36 478 512 390 48.0 1e-108 MNSKMCATTNRAKNWESIDFSLAESYVKKLQMRIVKAWKMSKYGKVKSLQHLLTTSFYAK ALAIKRVTENQGKKTSGVDGELWLTSQAKYKAIEKLNLRGYKPKPLKRVYIPKKNGKKRP LSIPTMTDRAMQTLYKFALEPIAETTADPNSYGFRAKRCTQDAIEQCFTSLNKKKSAKWV LEGDIKGCFDNISHEWILNNIPMNKKLLKLWLECGYIEKQKLFPTETGSPQGSPISPIIS NMVLDGLEKAIKEKYHKRTVNKKAYFPKVNFVRYADDFIVTGESAELLENGVKPIIVKFL EERGLELSEEKTLITHINDGFDFLGVNIRMYKDKLLTKPSDKNFKAIVDKIRRIIKDNPS MKQEILIRKLNPIIIGWVNYQKYNVSSKAFEKLDYEIYKSLWTWCVRRHPKKGRKWIAKK YFHTIGNRTWTFSVATGNRMENGEKYYLRLKYATDTDIKRFTKIQAEANPFDENWQIYFE EREELKIRNELKGRTVINRLYKMQNGICPVCGEKITIDTDFRVHQTIQNNITLKTLVHPW CHRKLHINDEENTLAL >gi|224531373|gb|GG658179.1| GENE 461 494435 - 495790 1237 451 aa, chain + ## HITS:1 COG:no KEGG:CD1862 NR:ns ## KEGG: CD1862 # Name: not_defined # Def: putative conjugative transposon DNA recombination protein # Organism: C.difficile # Pathway: not_defined # 1 447 2563 3008 3011 591 75.0 1e-167 MTSKTPVRVAEDVDENSLNYAEIKALATGDPKIKEKMDLDNEVTKLKMLEANYKSNRYRL EDKVAKTYPEEIARTEKLIEAVKKDIENVEPQGSSENKFTSISINGEIIRDKKIAGEKLL EAIKGVKINESNVIGQYRNMDLEVSYNFFTNEHNFSLNGAAKHSGELGKSADGNLTRLDN ALEKMPEKLNRLEEKLISTKEQLENAKEELKKPFEKADELKTKVLRLAELNKLLDMGEVE EKENLNPLLEDVKRAIVDFCKREYEDDSYTYENFSNLFPDLAHIGIAYTTTPDEKHEIQY EISLEDFTATQYINGEPITKIDYLKDLGSEEKALEFLKQEMEYGDFGEFVSIDDNDLKKA LGLERDDDGNIYDPLAKDLDNDGVPDRYDNDFRDSDYFETTYDVEDNLNARAESKEKVSE KPSILGQIKSYQSQEKQTETRENKSKEHDER >gi|224531373|gb|GG658179.1| GENE 462 495842 - 496501 653 219 aa, chain + ## HITS:1 COG:no KEGG:Smon_0655 NR:ns ## KEGG: Smon_0655 # Name: not_defined # Def: hypothetical protein # Organism: S.moniliformis # Pathway: not_defined # 1 219 1 215 215 262 83.0 9e-69 MNYKEMRNTLEQMANENHEDFAKALISFEKGINDKDALDKLYQEYMDNDSMSLLNDEFDY LIDELRENGQIKESVAIEKEDNDLVNIVGNVVGEIETIERENKNGEAFKVVNFSVVAKDD EGNKTYTNCSAYGDKGDIPKEFKQGDFVKLFGQVRTSIDDNGKEHTNVRILSSKLLKAKE QMKNQEEKKESVLGAIKKYKAEEKAKPTEKKEASKGAER >gi|224531373|gb|GG658179.1| GENE 463 496651 - 496881 240 76 aa, chain + ## HITS:1 COG:no KEGG:CD1864 NR:ns ## KEGG: CD1864 # Name: not_defined # Def: putative conjugative transposon regulatory protein # Organism: C.difficile # Pathway: not_defined # 1 76 1 76 76 98 72.0 9e-20 MSKLSYKKLFKKLIDIEMKNTELMEKAKVSKSTFYKIKNGENVTTDVLLRICDVLECDIS EIVECVSIEDGGKTGV >gi|224531373|gb|GG658179.1| GENE 464 496874 - 497935 1132 353 aa, chain + ## HITS:1 COG:HP0051 KEGG:ns NR:ns ## COG: HP0051 COG0270 # Protein_GI_number: 15644682 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Helicobacter pylori 26695 # 4 349 3 349 355 206 36.0 7e-53 MSKFTVIDLFSGAGGLSKGFLDAGFDVILGIDFDDSALKTFENNHGKAKALKLDLFNLDN INYIISEFGREHNTLDVLVGGPPCQGFSLAGKREEDDKRNMLYKAMVKLAERMKPRAVVL ENVPGMLTLYDGAGKKRIFNDFEKLGYKMSVKVLYAPEYGVPQIRKRAFFVGLLNSKEGF TFPEPILSSENFVTCEDAIGDLPSLEGIYGDEIQEYECSPQTKYQAEMRKNSTKLYNNIG TIHSSKTVKMISLVPEGKNYKALPEEYRNMYKYNEALTRYHSKKPSLTINTGHRSHFHYK YNRIPTVRESARLQSFPDDFIFYGNKSEQYKQVGNAVPPKLGYAIAKKLKDYL >gi|224531373|gb|GG658179.1| GENE 465 497954 - 499177 789 407 aa, chain + ## HITS:1 COG:MTH495 KEGG:ns NR:ns ## COG: MTH495 COG0270 # Protein_GI_number: 15678523 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Methanothermobacter thermautotrophicus # 1 402 1 407 413 189 35.0 1e-47 MQKYKFIDLFAGCGGLEDGFMQTGDYECISSVEWLKPQVDTLRHRLKNKYNILDADESVL HFDIQREDELFNGWSNDENFGSSLGLDYYVKKSNGVDLIIGGPPCQAYSIAGRVRDENGM RNDYRNYLFEHYLSVVKRYKPKVFVFENVPGILSAKPNDKKIIEIIEEEFKKSGYVISNK ILKYGVVDASKYGVPQRRKRVILLGVRKDLDSLNSIYDKIDDFYNVILPKYQQKEVTVGE AIDDLPKISPIWDEKKRTNKKAYTYQEGINWHIPRYHNLRDMDIYKMLAEDIETGEKKYT NAAAITKIYEQKVGSKSPIHRYHVLRKDEPSTTIIAHLYKDGNRFIHYDSSQARSITPRE AARLQSFDDDFNFIGSQGSVYQMIGNAVPPKLALAIGKAVKEFLDNL >gi|224531373|gb|GG658179.1| GENE 466 499191 - 500912 935 573 aa, chain + ## HITS:1 COG:jhp0164 KEGG:ns NR:ns ## COG: jhp0164 COG1401 # Protein_GI_number: 15611234 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Helicobacter pylori J99 # 275 569 155 444 448 133 34.0 9e-31 MFHYLYTNDMRVSNLEEKATSFAKMFLTDSVPSASEDKSTNNNANTIGFYLNLINKGNSA KLAAKGDVRSVVLNFIKTFQFPNPRTKESFENAVSDGIKLAPMREIIKILFIYYQMNSGE VYLTKDEIVNFIFYNENIALQIDADRIQLIKQIEEYRTTKNLPSNIAPTSERIWKHQDRQ INELLSVIEWSKFIEVKSDKVFFIVPTKDDSKYKSELLDIIMFDEFWDFNDQDNISDLKS SYFEYCDEQISVENIEFENYNDIQCNKLNRNIQNIYFGAPGTGKSYGVDKLIRNCYPDIE NKDNPFVFKTTVYSDYSYYNFIGNIMPTSKNGEIGYDFKAGIFSQALATAFEYSDKEIFL IVEEMSRGNIASIFGDIFQLLDRDKNGLSEYSINNDLIIQHFDEKGINIGKKIFLPRNFH IIGTVNTSDQNVNVIDTAFKRRFEFVYVDVSPVSKDGTIMNEYVFTLANKEFEWNKLYMS LNKLITTKLELSEDKQIGQFFIKFNNYSNDEQKFAAIQNKLLHYLWDDVQGAVISDEYKI FNKDYKTFSSLYKDFGEKLNVFSEELIDLYDKQ >gi|224531373|gb|GG658179.1| GENE 467 500928 - 502130 379 400 aa, chain + ## HITS:1 COG:no KEGG:Sca_2323 NR:ns ## KEGG: Sca_2323 # Name: not_defined # Def: hypothetical protein # Organism: S.carnosus # Pathway: not_defined # 3 396 2 413 416 128 27.0 6e-28 MSQQEIRVVNDGQTVDKDFVNSWEIFDYCDQYNGSLTISFVGAIIKNDKILFSFPKHYKV DDKHNQVSCMKQILYILSKSKASYGSFDKGIKGEFPIKAYLGILMHYKKYGLYLSNEQYY ENGYAGNIDWNRTVNKSNKIIQKKGVIFFPFTIKRTRDKSVFISECMNYVLSDASRYKKF INTIMPYEYINKNNIFNNLRYVLNELKRIRNIYFKDIEKRLINNLIEYIEWKSTTRDNVR LITLKFENYWEVMINEYLNDGFCGIEEDQIIWGENKQNKFSKPEMEYVESAEKRLQYKSR SPYKIQYDHIFIDDDNHKIVLFDSKYFNAEVEQLNYKQLFYQYNLKQKYPEFFIYNGLLL PTEKTYYTKIHVDRTDLDGVKIVEHYINLNSVLDHYSRKI >gi|224531373|gb|GG658179.1| GENE 468 502149 - 502976 803 275 aa, chain + ## HITS:1 COG:no KEGG:Clole_2732 NR:ns ## KEGG: Clole_2732 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 1 275 1 296 297 129 34.0 1e-28 MSSCLRKIEYYGICFCERGGEYEDSEKLVDLVTALDTNFIYDDSKTNKFWRLDTKERSNN IFKLIYKSGKYNHSPNYISRLNGQERLSDKDLDEGECEKTHIVIDTNTSSLIIESRRSGI SAFSIVKYINSFIKDRNLDFNKIKVVKELKEDFLSNIQALDRIQSVELFVEKEIIGSDYL NLIEPTTETQDEVVITIKAQKRKTLIRSQIIDRFKKIGLQGEKTKRIRVRGRDSDNITVL LDSLNQGKVEQIYVDLNENGTVNSNSFFEKAIEVL >gi|224531373|gb|GG658179.1| GENE 469 502973 - 503500 375 175 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466259|ref|ZP_05630570.1| ## NR: gi|257466259|ref|ZP_05630570.1| hypothetical protein FgonA2_02329 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 175 1 175 175 262 100.0 8e-69 MRKKYNIEWIRIVIDYLQVSDTQDKNIEIVFPVFLSVITSGLYYRFNDIVYAVKIFSEIL LTVDSMLIGFTGILVTLLLTTENRTIDTLKKKESPKKLYGKKVNLFDLLHILFTNSLLNE IILLLVVMLNLFLRGLLYNKILSLLGLIIEVFMILNITFSMMRGVNNLYWTFKKK >gi|224531373|gb|GG658179.1| GENE 470 503502 - 504833 1037 443 aa, chain - ## HITS:1 COG:SP1056_1 KEGG:ns NR:ns ## COG: SP1056_1 COG3843 # Protein_GI_number: 15900926 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Streptococcus pneumoniae TIGR4 # 1 250 1 268 402 67 28.0 4e-11 MAITKIHPIKSTLNLAIDYITNEEKTDEKILVSTHNCFASTAHTSFLKTREDNKVSGSVL ARHLIQSFLPGEATPEMAHQIGLELCKKILKDEYEFVLSTHIDKGHIHNHIIFNNVNMVS GKCYQSNKKSYHQIRYQSDKLCKENNLSVIDGFYESYKRKYKTNGKSWYENEQSKKGTSW KSKLQFDIDRMIKQSKSWEEFLKKMVELGYEIKHGKHIAFKHKDKERFTRAKTIGEDYIE DRLKERIVENATQRIYAVKKRIGNIIDIANNEKIKSSKGYEYWATKHNLKTAANTVVLMR EKGFKSISQLDEYIKKSALKRQDLQDQIKVIDKKISAISNTMEQVHTVKSYRQIYLEYKK DSSDKAFFEEHKSEITLYENALSDLKKSYSKLPNSKYILKELDSLHEKKNTLMQEYSSAK TDMKELYQIRKNYEKYMGKDMER >gi|224531373|gb|GG658179.1| GENE 471 504834 - 505193 228 119 aa, chain - ## HITS:1 COG:no KEGG:Smon_0666 NR:ns ## KEGG: Smon_0666 # Name: not_defined # Def: hypothetical protein # Organism: S.moniliformis # Pathway: not_defined # 1 118 1 118 119 163 72.0 2e-39 MANRIRNIQLKINLTEKEKALFEKKMKMAKCKTMNHFLRKVVSETDIYVVDLQPFREIQG LLFRYASSVNQIAKRVNSTGIVYRDDIKDMQNQIEHLSKEIWQIHSLLLGRTKEKGDDV >gi|224531373|gb|GG658179.1| GENE 472 505498 - 505762 270 88 aa, chain + ## HITS:1 COG:FN0473 KEGG:ns NR:ns ## COG: FN0473 COG1309 # Protein_GI_number: 19703808 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 86 1 85 189 79 52.0 2e-15 MAQVLKEEVRNRILEAAEKVFYKKDYRGAKLTEIAKEADIPVALIYTYFKNKEVLFDAVV SSVYINFESAFNEEESLEKGSASERFDE Prediction of potential genes in microbial genomes Time: Sat Jul 9 16:39:56 2011 Seq name: gi|224531372|gb|GG658180.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.2, whole genome shotgun sequence Length of sequence - 378104 bp Number of predicted genes - 361, with homology - 354 Number of transcription units - 104, operones - 68 average op.length - 4.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 1/0.103 + CDS 888 - 1436 758 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 3 1 Op 3 11/0.000 + CDS 1475 - 2833 1603 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 4 1 Op 4 1/0.103 + CDS 2823 - 3773 1190 ## COG0462 Phosphoribosylpyrophosphate synthetase 5 1 Op 5 . + CDS 3776 - 4384 691 ## COG0009 Putative translation factor (SUA5) 6 1 Op 6 . + CDS 4393 - 4827 643 ## FN1994 hypothetical protein + Term 4829 - 4870 7.3 - Term 4820 - 4853 2.1 7 2 Tu 1 . - CDS 4867 - 5847 1451 ## COG0180 Tryptophanyl-tRNA synthetase - Prom 5871 - 5930 7.6 8 3 Tu 1 . + CDS 5971 - 6924 462 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase + Prom 6960 - 7019 8.2 9 4 Op 1 16/0.000 + CDS 7070 - 8086 1685 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 8120 - 8154 6.2 + Prom 8100 - 8159 6.7 10 4 Op 2 10/0.000 + CDS 8181 - 9683 2006 ## COG1129 ABC-type sugar transport system, ATPase component 11 4 Op 3 . + CDS 9703 - 10722 1680 ## COG4211 ABC-type glucose/galactose transport system, permease component 12 4 Op 4 . + CDS 10785 - 10955 305 ## COG1773 Rubredoxin + Term 10959 - 11000 5.6 + Prom 10975 - 11034 11.8 13 5 Tu 1 . + CDS 11060 - 11671 801 ## Closa_2635 hypothetical protein + Prom 11688 - 11747 9.0 14 6 Op 1 2/0.000 + CDS 11773 - 12333 760 ## COG0450 Peroxiredoxin + Term 12362 - 12390 1.0 15 6 Op 2 . + CDS 12413 - 14059 2501 ## COG0492 Thioredoxin reductase + Term 14080 - 14125 3.2 + Prom 14106 - 14165 15.2 16 7 Tu 1 . + CDS 14231 - 19003 4900 ## FN1905 168 kDa surface-layer protein precursor + Term 19012 - 19060 7.1 + Prom 19035 - 19094 11.3 17 8 Op 1 1/0.103 + CDS 19116 - 20072 281 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 18 8 Op 2 1/0.103 + CDS 20041 - 20673 796 ## COG0164 Ribonuclease HII 19 8 Op 3 1/0.103 + CDS 20684 - 21055 548 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 20 8 Op 4 1/0.103 + CDS 21015 - 21239 275 ## COG3478 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 21 8 Op 5 . + CDS 21202 - 21870 672 ## COG1040 Predicted amidophosphoribosyltransferases 22 8 Op 6 8/0.000 + CDS 21947 - 22699 1245 ## COG0149 Triosephosphate isomerase 23 8 Op 7 . + CDS 22715 - 24235 2170 ## COG0696 Phosphoglyceromutase + Term 24255 - 24288 2.3 + Prom 24290 - 24349 11.3 24 9 Tu 1 . + CDS 24463 - 25947 2382 ## COG1757 Na+/H+ antiporter + Term 25979 - 26028 13.5 + Prom 26033 - 26092 7.9 25 10 Op 1 9/0.000 + CDS 26134 - 26403 384 ## COG3830 ACT domain-containing protein 26 10 Op 2 . + CDS 26426 - 27784 1848 ## COG2848 Uncharacterized conserved protein 27 10 Op 3 1/0.103 + CDS 27847 - 28944 1414 ## COG0012 Predicted GTPase, probable translation factor 28 10 Op 4 14/0.000 + CDS 29024 - 29206 268 ## PROTEIN SUPPORTED gi|237737599|ref|ZP_04568080.1| LSU ribosomal protein L32P + Term 29219 - 29251 1.7 + Prom 29267 - 29326 10.4 29 11 Op 1 16/0.000 + CDS 29352 - 30353 1445 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 30 11 Op 2 14/0.000 + CDS 30350 - 31336 1350 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 31 11 Op 3 6/0.000 + CDS 31347 - 32261 1339 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 32 11 Op 4 27/0.000 + CDS 32300 - 32524 499 ## COG0236 Acyl carrier protein + Term 32547 - 32583 2.3 33 11 Op 5 1/0.103 + CDS 32594 - 33841 2085 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 34 11 Op 6 3/0.000 + CDS 33851 - 34549 701 ## COG0571 dsRNA-specific ribonuclease 35 11 Op 7 1/0.103 + CDS 34546 - 35592 1281 ## COG1243 Histone acetyltransferase 36 11 Op 8 . + CDS 35567 - 36844 1076 ## COG1530 Ribonucleases G and E 37 11 Op 9 1/0.103 + CDS 36856 - 37353 290 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 38 11 Op 10 7/0.000 + CDS 37357 - 38739 1607 ## COG1066 Predicted ATP-dependent serine protease 39 11 Op 11 . + CDS 38736 - 39785 705 ## PROTEIN SUPPORTED gi|163764769|ref|ZP_02171823.1| ribosomal protein L18 40 11 Op 12 . + CDS 39857 - 40255 623 ## FN1852 hypothetical protein + Term 40274 - 40306 4.2 + Prom 40311 - 40370 8.0 41 12 Op 1 1/0.103 + CDS 40406 - 41713 526 ## PROTEIN SUPPORTED gi|229254937|ref|ZP_04378866.1| SSU ribosomal protein S12P methylthiotransferase 42 12 Op 2 1/0.103 + CDS 41730 - 42971 1130 ## COG1158 Transcription termination factor 43 12 Op 3 1/0.103 + CDS 42975 - 44126 1288 ## COG0739 Membrane proteins related to metalloendopeptidases 44 12 Op 4 1/0.103 + CDS 44139 - 45212 1254 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 45 12 Op 5 . + CDS 45269 - 45721 592 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 46 12 Op 6 . + CDS 45718 - 46041 399 ## FN0480 hypothetical protein 47 12 Op 7 . + CDS 46055 - 46456 555 ## FN0481 hypothetical protein + Prom 46458 - 46517 5.7 48 12 Op 8 1/0.103 + CDS 46554 - 46796 381 ## PROTEIN SUPPORTED gi|237739934|ref|ZP_04570415.1| LSU ribosomal protein L31P + Prom 47123 - 47182 80.4 49 13 Op 1 . + CDS 47212 - 47835 917 ## COG0035 Uracil phosphoribosyltransferase + Term 47841 - 47885 4.2 + Prom 47837 - 47896 4.6 50 13 Op 2 15/0.000 + CDS 47919 - 48161 406 ## COG2608 Copper chaperone 51 13 Op 3 . + CDS 48158 - 50383 3013 ## COG2217 Cation transport ATPase 52 13 Op 4 . + CDS 50385 - 50786 493 ## COG0295 Cytidine deaminase + Prom 50807 - 50866 3.0 53 14 Op 1 1/0.103 + CDS 50886 - 52262 1717 ## COG2031 Short chain fatty acids transporter 54 14 Op 2 21/0.000 + CDS 52290 - 52940 1040 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 55 14 Op 3 . + CDS 52953 - 53618 1015 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit + Term 53749 - 53780 2.1 + Prom 53686 - 53745 2.3 56 14 Op 4 . + CDS 53789 - 55090 1880 ## COG0422 Thiamine biosynthesis protein ThiC + Term 55095 - 55147 11.2 - Term 55080 - 55137 11.0 57 15 Op 1 . - CDS 55143 - 56477 1243 ## COG0534 Na+-driven multidrug efflux pump 58 15 Op 2 . - CDS 56486 - 58270 526 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 - Prom 58340 - 58399 18.0 + Prom 58313 - 58372 8.3 59 16 Tu 1 . + CDS 58471 - 59652 1768 ## COG1301 Na+/H+-dicarboxylate symporters + Term 59674 - 59715 7.1 + Prom 59689 - 59748 12.6 60 17 Op 1 . + CDS 59772 - 60101 481 ## FN0737 hypothetical protein 61 17 Op 2 . + CDS 60114 - 60971 314 ## PROTEIN SUPPORTED gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains + Term 60979 - 61021 6.6 + Prom 61279 - 61338 7.2 62 18 Tu 1 . + CDS 61360 - 63048 2559 ## COG5295 Autotransporter adhesin + Term 63062 - 63100 8.5 + Prom 63105 - 63164 11.4 63 19 Tu 1 . + CDS 63187 - 64839 1988 ## FN1654 hypothetical protein + Term 65073 - 65111 4.8 - Term 64818 - 64854 3.2 64 20 Op 1 . - CDS 64861 - 65499 518 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 65 20 Op 2 1/0.103 - CDS 65496 - 67097 1094 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP 66 20 Op 3 1/0.103 - CDS 67114 - 67788 932 ## COG1846 Transcriptional regulators 67 20 Op 4 10/0.000 - CDS 67801 - 68439 1064 ## COG0036 Pentose-5-phosphate-3-epimerase 68 20 Op 5 7/0.000 - CDS 68429 - 69235 1190 ## COG1162 Predicted GTPases - Prom 69262 - 69321 4.3 69 20 Op 6 . - CDS 69323 - 70030 791 ## COG2815 Uncharacterized protein conserved in bacteria - Prom 70066 - 70125 7.0 70 21 Op 1 1/0.103 + CDS 70181 - 70717 708 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 71 21 Op 2 . + CDS 70726 - 71541 802 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 72 21 Op 3 . + CDS 71522 - 71767 295 ## FN0286 hypothetical protein 73 21 Op 4 12/0.000 + CDS 71777 - 72016 414 ## COG1837 Predicted RNA-binding protein (contains KH domain) 74 21 Op 5 30/0.000 + CDS 72027 - 72545 756 ## COG0806 RimM protein, required for 16S rRNA processing 75 21 Op 6 2/0.000 + CDS 72547 - 73257 976 ## COG0336 tRNA-(guanine-N1)-methyltransferase 76 21 Op 7 1/0.103 + CDS 73254 - 73820 729 ## COG4752 Uncharacterized protein conserved in bacteria 77 21 Op 8 . + CDS 73820 - 78172 4551 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) 78 21 Op 9 . + CDS 78182 - 79483 1318 ## FN0280 hypothetical protein 79 21 Op 10 1/0.103 + CDS 79473 - 80207 750 ## COG2853 Surface lipoprotein 80 21 Op 11 1/0.103 + CDS 80208 - 81566 1949 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 81 21 Op 12 . + CDS 81586 - 82461 1025 ## COG4866 Uncharacterized conserved protein 82 21 Op 13 . + CDS 82478 - 83680 2013 ## COG1171 Threonine dehydratase 83 21 Op 14 . + CDS 83701 - 85335 1730 ## COG1283 Na+/phosphate symporter + Prom 85379 - 85438 12.3 84 22 Tu 1 . + CDS 85479 - 85604 182 ## + Prom 86482 - 86541 80.4 85 23 Tu 1 . + CDS 86651 - 86875 419 ## gi|317059022|ref|ZP_07923507.1| predicted protein + Term 86889 - 86945 6.4 86 24 Op 1 . - CDS 86916 - 87299 503 ## YE105_C1801 putative phagelysin 87 24 Op 2 . - CDS 87311 - 87496 300 ## gi|257452483|ref|ZP_05617782.1| hypothetical protein F3_05395 88 24 Op 3 . - CDS 87502 - 87864 401 ## SNSL254_A1182 hypothetical protein - Prom 87901 - 87960 8.6 + Prom 87838 - 87897 12.9 89 25 Op 1 . + CDS 88024 - 88245 333 ## gi|257452485|ref|ZP_05617784.1| hypothetical protein F3_05405 + Prom 88266 - 88325 9.2 90 25 Op 2 . + CDS 88357 - 88650 414 ## gi|257452486|ref|ZP_05617785.1| hypothetical protein F3_05410 + Term 88654 - 88704 8.5 + Prom 88850 - 88909 10.6 91 26 Tu 1 . + CDS 88939 - 89640 1020 ## FN0602 hypothetical protein + Term 89795 - 89832 4.1 + Prom 89645 - 89704 6.7 92 27 Op 1 36/0.000 + CDS 89840 - 90352 339 ## PROTEIN SUPPORTED gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 93 27 Op 2 46/0.000 + CDS 90398 - 90604 324 ## PROTEIN SUPPORTED gi|19703669|ref|NP_603231.1| 50S ribosomal protein L35P 94 27 Op 3 . + CDS 90622 - 90972 510 ## PROTEIN SUPPORTED gi|237739652|ref|ZP_04570133.1| LSU ribosomal protein L20P + Term 90988 - 91054 13.8 - Term 90984 - 91031 6.1 95 28 Op 1 4/0.000 - CDS 91064 - 92230 1336 ## COG0003 Oxyanion-translocating ATPase 96 28 Op 2 . - CDS 92227 - 93414 959 ## COG0003 Oxyanion-translocating ATPase - Prom 93533 - 93592 6.9 + Prom 93408 - 93467 8.9 97 29 Op 1 13/0.000 + CDS 93690 - 94241 857 ## COG1556 Uncharacterized conserved protein + Term 94254 - 94294 2.3 98 29 Op 2 1/0.103 + CDS 94312 - 96468 2559 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 99 29 Op 3 2/0.000 + CDS 96469 - 97419 1383 ## COG0142 Geranylgeranyl pyrophosphate synthase 100 29 Op 4 1/0.103 + CDS 97449 - 98348 587 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 101 29 Op 5 1/0.103 + CDS 98345 - 99046 274 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 102 29 Op 6 12/0.000 + CDS 99064 - 100359 2238 ## COG0644 Dehydrogenases (flavoproteins) 103 29 Op 7 . + CDS 100362 - 100646 359 ## COG2440 Ferredoxin-like protein + Term 100671 - 100707 5.0 + Prom 100682 - 100741 5.7 104 30 Op 1 2/0.000 + CDS 100794 - 101471 1028 ## COG2186 Transcriptional regulators + Term 101552 - 101597 4.2 + Prom 101485 - 101544 10.7 105 30 Op 2 1/0.103 + CDS 101634 - 103061 2258 ## COG0277 FAD/FMN-containing dehydrogenases + Prom 103095 - 103154 4.5 106 31 Op 1 2/0.000 + CDS 103202 - 104338 1654 ## COG1960 Acyl-CoA dehydrogenases 107 31 Op 2 29/0.000 + CDS 104356 - 105132 1136 ## COG2086 Electron transfer flavoprotein, beta subunit 108 31 Op 3 1/0.103 + CDS 105146 - 106120 1556 ## COG2025 Electron transfer flavoprotein, alpha subunit 109 31 Op 4 23/0.000 + CDS 106184 - 106564 491 ## COG1380 Putative effector of murein hydrolase LrgA 110 31 Op 5 . + CDS 106561 - 107283 957 ## COG1346 Putative effector of murein hydrolase + Term 107294 - 107360 9.1 + Prom 107345 - 107404 7.5 111 32 Tu 1 . + CDS 107439 - 108827 1719 ## COG1757 Na+/H+ antiporter + Term 108836 - 108873 6.6 - Term 108822 - 108861 7.0 112 33 Tu 1 . - CDS 108866 - 109312 555 ## COG1490 D-Tyr-tRNAtyr deacylase - Prom 109338 - 109397 6.4 + Prom 109380 - 109439 7.9 113 34 Op 1 1/0.103 + CDS 109465 - 110973 2184 ## COG1488 Nicotinic acid phosphoribosyltransferase 114 34 Op 2 1/0.103 + CDS 110982 - 111896 680 ## COG0688 Phosphatidylserine decarboxylase 115 34 Op 3 1/0.103 + CDS 111871 - 112272 396 ## COG5341 Uncharacterized protein conserved in bacteria 116 34 Op 4 1/0.103 + CDS 112277 - 113398 1263 ## COG0628 Predicted permease 117 34 Op 5 . + CDS 113382 - 114533 1331 ## COG0116 Predicted N6-adenine-specific DNA methylase 118 34 Op 6 . + CDS 114523 - 115185 754 ## Ilyop_1994 hypothetical protein 119 34 Op 7 . + CDS 115207 - 116514 2074 ## COG2056 Predicted permease 120 34 Op 8 1/0.103 + CDS 116562 - 117458 1409 ## COG3643 Glutamate formiminotransferase 121 34 Op 9 1/0.103 + CDS 117469 - 118695 1622 ## COG1228 Imidazolonepropionase and related amidohydrolases 122 34 Op 10 . + CDS 118705 - 119343 1165 ## COG3404 Methenyl tetrahydrofolate cyclohydrolase + Term 119349 - 119390 6.4 - Term 119335 - 119380 1.3 123 35 Tu 1 . - CDS 119384 - 119830 450 ## COG3086 Positive regulator of sigma E activity - Prom 119857 - 119916 12.2 + Prom 119896 - 119955 9.8 124 36 Op 1 . + CDS 119997 - 120821 896 ## FN0760 hypothetical protein 125 36 Op 2 . + CDS 120837 - 121883 1663 ## COG1077 Actin-like ATPase involved in cell morphogenesis 126 36 Op 3 . + CDS 121900 - 123522 1583 ## Ilyop_0587 hypothetical protein 127 36 Op 4 12/0.000 + CDS 123506 - 124030 662 ## COG1386 Predicted transcriptional regulator containing the HTH domain 128 36 Op 5 1/0.103 + CDS 124017 - 124733 924 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 129 36 Op 6 31/0.000 + CDS 124750 - 125043 588 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 130 36 Op 7 21/0.000 + CDS 125058 - 126515 410 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 131 36 Op 8 . + CDS 126531 - 127982 1918 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) - TRNA 128025 - 128100 85.4 # Thr GGT 0 0 + Prom 128097 - 128156 2.7 132 37 Tu 1 . + CDS 128176 - 129048 979 ## COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain + Term 129157 - 129190 0.8 - Term 129014 - 129056 6.3 133 38 Tu 1 . - CDS 129063 - 129776 762 ## COG0846 NAD-dependent protein deacetylases, SIR2 family + Prom 129817 - 129876 6.5 134 39 Tu 1 . + CDS 129906 - 131198 1700 ## COG3681 Uncharacterized conserved protein + Term 131221 - 131259 1.4 + Prom 131351 - 131410 9.7 135 40 Op 1 2/0.000 + CDS 131472 - 133385 2854 ## COG1960 Acyl-CoA dehydrogenases 136 40 Op 2 . + CDS 133401 - 134603 1637 ## COG0426 Uncharacterized flavoproteins + Term 134627 - 134671 13.2 137 41 Tu 1 . - CDS 134663 - 135628 831 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 135657 - 135716 11.7 - Term 135694 - 135729 5.3 138 42 Tu 1 . - CDS 135749 - 137416 2701 ## COG1151 6Fe-6S prismane cluster-containing protein - Prom 137490 - 137549 13.9 - Term 137514 - 137552 3.1 139 43 Op 1 . - CDS 137562 - 138554 1446 ## COG3641 Predicted membrane protein, putative toxin regulator - Prom 138574 - 138633 5.2 140 43 Op 2 . - CDS 138649 - 139158 760 ## COG1827 Predicted small molecule binding protein (contains 3H domain) - Prom 139279 - 139338 80.4 + Prom 140353 - 140412 80.4 141 44 Op 1 . + CDS 140512 - 142134 1928 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 142 44 Op 2 1/0.103 + CDS 142152 - 143438 1694 ## COG0536 Predicted GTPase 143 44 Op 3 . + CDS 143448 - 143813 546 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 144 44 Op 4 . + CDS 143825 - 144355 663 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 145 44 Op 5 . + CDS 144390 - 144776 254 ## gi|257466406|ref|ZP_05630717.1| hypothetical protein FgonA2_03076 146 44 Op 6 1/0.103 + CDS 144781 - 145176 529 ## COG3920 Signal transduction histidine kinase 147 44 Op 7 1/0.103 + CDS 145181 - 145531 611 ## COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 148 44 Op 8 . + CDS 145556 - 147121 2536 ## COG1418 Predicted HD superfamily hydrolase + Term 147135 - 147165 -0.4 149 44 Op 9 . + CDS 147199 - 148422 1569 ## COG1760 L-serine deaminase 150 44 Op 10 . + CDS 148427 - 149335 1017 ## COG2990 Uncharacterized protein conserved in bacteria 151 44 Op 11 . + CDS 149351 - 150244 758 ## COG2990 Uncharacterized protein conserved in bacteria + Term 150303 - 150336 0.5 152 45 Op 1 12/0.000 - CDS 150212 - 150652 519 ## COG3610 Uncharacterized conserved protein 153 45 Op 2 . - CDS 150663 - 151424 616 ## COG2966 Uncharacterized conserved protein 154 45 Op 3 . - CDS 151408 - 151740 384 ## FN0762 hypothetical protein - Prom 151770 - 151829 13.8 + Prom 151771 - 151830 9.1 155 46 Op 1 . + CDS 151858 - 153513 1996 ## Rumal_0477 dynamin family protein 156 46 Op 2 . + CDS 153495 - 154970 1545 ## COG1078 HD superfamily phosphohydrolases + Prom 154985 - 155044 1.7 157 47 Op 1 . + CDS 155105 - 156259 215 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 158 47 Op 2 . + CDS 156329 - 156952 640 ## Ilyop_2792 lysine exporter protein (LysE/YggA) 159 47 Op 3 1/0.103 + CDS 156978 - 158030 1510 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 160 47 Op 4 . + CDS 158048 - 158446 757 ## COG1970 Large-conductance mechanosensitive channel + Term 158457 - 158514 0.6 - Term 158361 - 158396 -0.9 161 48 Op 1 11/0.000 - CDS 158500 - 159300 765 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 162 48 Op 2 3/0.000 - CDS 159297 - 159935 816 ## COG0352 Thiamine monophosphate synthase 163 48 Op 3 . - CDS 159919 - 160467 509 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 164 48 Op 4 5/0.000 - CDS 160464 - 161570 1072 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 165 48 Op 5 . - CDS 161567 - 162346 1008 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 166 48 Op 6 . - CDS 162365 - 162577 304 ## gi|257466427|ref|ZP_05630738.1| hypothetical protein FgonA2_03181 - Prom 162610 - 162669 9.1 - Term 162614 - 162644 1.3 167 49 Tu 1 . - CDS 162756 - 163223 576 ## COG1683 Uncharacterized conserved protein - Prom 163314 - 163373 8.6 + Prom 163228 - 163287 10.8 168 50 Op 1 1/0.103 + CDS 163378 - 166896 4543 ## COG1196 Chromosome segregation ATPases 169 50 Op 2 . + CDS 166915 - 167922 1291 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 170 50 Op 3 . + CDS 167907 - 168479 383 ## FN1131 hypothetical protein 171 50 Op 4 . + CDS 168488 - 169099 826 ## Ilyop_1419 hypothetical protein 172 50 Op 5 . + CDS 169112 - 169789 788 ## COG5522 Predicted integral membrane protein 173 50 Op 6 32/0.000 + CDS 169860 - 170939 1495 ## COG0216 Protein chain release factor A 174 50 Op 7 . + CDS 170941 - 172047 325 ## PROTEIN SUPPORTED gi|170727358|ref|YP_001761384.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 175 50 Op 8 . + CDS 172026 - 172592 315 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 176 50 Op 9 . + CDS 172607 - 173125 982 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 177 50 Op 10 . + CDS 173112 - 173327 376 ## gi|257466438|ref|ZP_05630749.1| exodeoxyribonuclease VII small subunit 178 50 Op 11 1/0.103 + CDS 173314 - 174186 1235 ## COG0142 Geranylgeranyl pyrophosphate synthase 179 50 Op 12 . + CDS 174186 - 175217 1294 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 180 50 Op 13 . + CDS 175227 - 177203 2087 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 181 50 Op 14 . + CDS 177212 - 178165 1021 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 182 50 Op 15 . + CDS 178155 - 178853 812 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 183 50 Op 16 . + CDS 178867 - 179076 311 ## gi|257466444|ref|ZP_05630755.1| hypothetical protein FgonA2_03266 184 50 Op 17 4/0.000 + CDS 179084 - 180112 854 ## COG4394 Uncharacterized protein conserved in bacteria 185 50 Op 18 . + CDS 180126 - 180689 850 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 180703 - 180732 0.5 + Prom 180707 - 180766 7.0 186 51 Op 1 8/0.000 + CDS 180806 - 181117 365 ## COG2739 Uncharacterized protein conserved in bacteria 187 51 Op 2 23/0.000 + CDS 181128 - 182477 1930 ## COG0541 Signal recognition particle GTPase 188 51 Op 3 . + CDS 182518 - 182781 407 ## PROTEIN SUPPORTED gi|237739055|ref|ZP_04569536.1| SSU ribosomal protein S16P + Term 182806 - 182844 6.2 189 52 Tu 1 . + CDS 182854 - 183768 1000 ## COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain + Term 183796 - 183851 5.1 - Term 183783 - 183838 5.1 190 53 Tu 1 . - CDS 183884 - 184387 687 ## COG0716 Flavodoxins - Prom 184425 - 184484 5.6 + Prom 184370 - 184429 5.4 191 54 Op 1 . + CDS 184540 - 185292 914 ## FN1183 putative cytoplasmic protein 192 54 Op 2 . + CDS 185282 - 186034 838 ## FN1182 hypothetical protein 193 54 Op 3 . + CDS 186052 - 186696 566 ## FN1182 hypothetical protein 194 54 Op 4 . + CDS 186716 - 187597 1238 ## COG1857 Uncharacterized protein predicted to be involved in DNA repair 195 54 Op 5 . + CDS 187611 - 188720 1087 ## CTC01145 hypothetical protein 196 54 Op 6 6/0.000 + CDS 188730 - 190931 1793 ## COG1203 Predicted helicases 197 54 Op 7 12/0.000 + CDS 190951 - 191445 428 ## COG1468 RecB family exonuclease 198 54 Op 8 13/0.000 + CDS 191456 - 192448 932 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 199 54 Op 9 . + CDS 192455 - 192733 370 ## COG1343 Uncharacterized protein predicted to be involved in DNA repair + Term 192851 - 192913 -0.7 + Prom 198407 - 198466 8.9 200 55 Tu 1 . + CDS 198547 - 198630 115 ## + Term 198695 - 198751 -0.7 - TRNA 198548 - 198624 84.7 # Arg TCG 0 0 + Prom 198694 - 198753 10.1 201 56 Tu 1 . + CDS 198982 - 200694 1971 ## COG0018 Arginyl-tRNA synthetase + Term 200716 - 200762 1.0 + Prom 200778 - 200837 9.8 202 57 Op 1 1/0.103 + CDS 200885 - 203059 1713 ## PROTEIN SUPPORTED gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein 203 57 Op 2 1/0.103 + CDS 203060 - 205477 2358 ## COG0642 Signal transduction histidine kinase 204 57 Op 3 16/0.000 + CDS 205470 - 208265 3705 ## COG0060 Isoleucyl-tRNA synthetase 205 57 Op 4 1/0.103 + CDS 208275 - 208727 646 ## COG0597 Lipoprotein signal peptidase 206 57 Op 5 19/0.000 + CDS 208742 - 209620 1367 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 207 57 Op 6 1/0.103 + CDS 209624 - 211687 2836 ## COG0751 Glycyl-tRNA synthetase, beta subunit 208 57 Op 7 2/0.000 + CDS 211696 - 212250 692 ## COG0302 GTP cyclohydrolase I 209 57 Op 8 5/0.000 + CDS 212260 - 213087 615 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 210 57 Op 9 . + CDS 213071 - 213922 1262 ## COG0294 Dihydropteroate synthase and related enzymes 211 57 Op 10 . + CDS 213982 - 214293 525 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 214305 - 214348 9.0 - Term 214297 - 214329 4.0 212 58 Op 1 17/0.000 - CDS 214333 - 215817 1673 ## COG0168 Trk-type K+ transport systems, membrane components 213 58 Op 2 . - CDS 215830 - 217188 1557 ## COG0569 K+ transport systems, NAD-binding component - Prom 217413 - 217472 11.9 + Prom 217435 - 217494 13.7 214 59 Op 1 . + CDS 217569 - 219776 2490 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 215 59 Op 2 . + CDS 219799 - 223626 4588 ## FN0498 hypothetical protein + Term 223641 - 223703 -0.9 + Prom 223772 - 223831 9.2 216 60 Tu 1 . + CDS 223852 - 225480 1578 ## FN1654 hypothetical protein + Term 225488 - 225532 7.5 217 61 Op 1 . - CDS 225510 - 226175 602 ## COG0500 SAM-dependent methyltransferases 218 61 Op 2 . - CDS 226165 - 226767 552 ## FN0850 putative cytoplasmic protein 219 61 Op 3 . - CDS 226745 - 227866 1289 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes - Prom 227889 - 227948 13.3 - Term 227908 - 227956 4.1 220 62 Op 1 . - CDS 227968 - 228924 1029 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 221 62 Op 2 . - CDS 228941 - 229372 434 ## CPF_2500 hypothetical protein 222 62 Op 3 . - CDS 229369 - 231348 1690 ## COG0337 3-dehydroquinate synthetase - Prom 231414 - 231473 9.0 + Prom 231367 - 231426 12.3 223 63 Op 1 . + CDS 231448 - 231792 530 ## gi|257452625|ref|ZP_05617924.1| hypothetical protein F3_06109 224 63 Op 2 1/0.103 + CDS 231795 - 232979 1285 ## COG1295 Predicted membrane protein 225 63 Op 3 1/0.103 + CDS 233039 - 234940 2529 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 226 63 Op 4 4/0.000 + CDS 234937 - 237213 1947 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 227 63 Op 5 . + CDS 237226 - 237747 679 ## COG0242 N-formylmethionyl-tRNA deformylase 228 63 Op 6 . + CDS 237734 - 238042 275 ## gi|257452630|ref|ZP_05617929.1| hypothetical protein F3_06134 229 63 Op 7 . + CDS 238039 - 239097 1780 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 230 63 Op 8 . + CDS 239111 - 239602 740 ## FN0932 hypothetical protein + Term 239659 - 239733 29.2 + TRNA 239642 - 239717 93.2 # Gly TCC 0 0 + TRNA 239727 - 239802 95.4 # Lys CTT 0 0 + TRNA 239812 - 239886 66.8 # Glu TTC 0 0 + TRNA 239890 - 239965 97.4 # Val TAC 0 0 + TRNA 239981 - 240058 93.9 # Asp GTC 0 0 + Prom 239987 - 240046 80.4 231 64 Op 1 . + CDS 240237 - 241574 1443 ## COG1373 Predicted ATPase (AAA+ superfamily) + Term 241577 - 241622 -0.9 + Prom 241604 - 241663 6.8 232 64 Op 2 . + CDS 241702 - 242259 227 ## PROTEIN SUPPORTED gi|229236145|ref|ZP_04360568.1| acetyltransferase, ribosomal protein N-acetylase 233 64 Op 3 . + CDS 242256 - 242993 993 ## COG2071 Predicted glutamine amidotransferases + Term 243098 - 243135 0.8 - Term 242989 - 243023 1.3 234 65 Tu 1 . - CDS 243037 - 243552 682 ## COG0716 Flavodoxins - Prom 243581 - 243640 13.1 + Prom 243580 - 243639 14.3 235 66 Op 1 . + CDS 243706 - 244086 428 ## COG2832 Uncharacterized protein conserved in bacteria 236 66 Op 2 30/0.000 + CDS 244114 - 244722 816 ## COG0811 Biopolymer transport proteins 237 66 Op 3 11/0.000 + CDS 244725 - 245111 593 ## COG0848 Biopolymer transport protein 238 66 Op 4 . + CDS 245124 - 245861 816 ## COG0810 Periplasmic protein TonB, links inner and outer membranes 239 66 Op 5 . + CDS 245890 - 246348 560 ## Smon_1033 hypothetical protein + Prom 246352 - 246411 6.6 240 67 Tu 1 . + CDS 246469 - 247017 597 ## COG1309 Transcriptional regulator + Term 247022 - 247056 1.2 + Prom 247041 - 247100 11.2 241 68 Tu 1 . + CDS 247130 - 248098 1418 ## COG4143 ABC-type thiamine transport system, periplasmic component + Term 248171 - 248223 -0.7 + Prom 248209 - 248268 9.5 242 69 Op 1 . + CDS 248293 - 249198 1023 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 243 69 Op 2 13/0.000 + CDS 249208 - 250008 1035 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 244 69 Op 3 5/0.000 + CDS 250018 - 250938 1402 ## COG0167 Dihydroorotate dehydrogenase 245 69 Op 4 . + CDS 250941 - 251657 1001 ## COG0284 Orotidine-5'-phosphate decarboxylase 246 69 Op 5 1/0.103 + CDS 251651 - 252868 1439 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 247 69 Op 6 . + CDS 252861 - 253484 959 ## COG0461 Orotate phosphoribosyltransferase 248 70 Tu 1 . - CDS 253600 - 254280 696 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 254301 - 254360 6.8 + Prom 254248 - 254307 12.0 249 71 Op 1 . + CDS 254467 - 254565 114 ## 250 71 Op 2 . + CDS 254569 - 255885 2105 ## COG1757 Na+/H+ antiporter + Term 255892 - 255934 7.3 - Term 255878 - 255922 10.2 251 72 Tu 1 . - CDS 255930 - 257078 1587 ## COG0192 S-adenosylmethionine synthetase - Prom 257103 - 257162 7.0 - Term 257112 - 257146 2.1 252 73 Op 1 . - CDS 257279 - 258163 1339 ## COG1210 UDP-glucose pyrophosphorylase 253 73 Op 2 1/0.103 - CDS 258193 - 260115 2384 ## COG0143 Methionyl-tRNA synthetase 254 73 Op 3 . - CDS 260108 - 260419 541 ## COG2121 Uncharacterized protein conserved in bacteria - Prom 260445 - 260504 2.7 255 74 Op 1 . - CDS 260531 - 260776 266 ## gi|257452654|ref|ZP_05617953.1| lipoprotein - Term 260792 - 260824 -0.3 256 74 Op 2 1/0.103 - CDS 260854 - 261213 734 ## COG0718 Uncharacterized protein conserved in bacteria 257 74 Op 3 . - CDS 261281 - 262975 1896 ## COG0616 Periplasmic serine proteases (ClpP class) 258 74 Op 4 1/0.103 - CDS 262985 - 264760 2221 ## COG1164 Oligoendopeptidase F 259 74 Op 5 1/0.103 - CDS 264789 - 266054 834 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 260 74 Op 6 . - CDS 266098 - 266481 592 ## COG5496 Predicted thioesterase - Prom 266507 - 266566 7.5 + Prom 266475 - 266534 7.2 261 75 Op 1 . + CDS 266576 - 266683 64 ## 262 75 Op 2 9/0.000 + CDS 266628 - 267185 542 ## COG3683 ABC-type uncharacterized transport system, periplasmic component 263 75 Op 3 . + CDS 267182 - 267949 755 ## COG2215 ABC-type uncharacterized transport system, permease component 264 76 Op 1 . - CDS 269424 - 270071 788 ## COG1564 Thiamine pyrophosphokinase 265 76 Op 2 . - CDS 270071 - 270895 973 ## FN0891 DNAse I homologous protein DHP2 precursor (EC:3.1.21.-) - Prom 270932 - 270991 10.6 + Prom 270950 - 271009 5.3 266 77 Tu 1 . + CDS 271037 - 271765 1006 ## COG0560 Phosphoserine phosphatase + Term 271766 - 271816 8.1 + Prom 271769 - 271828 8.4 267 78 Op 1 13/0.000 + CDS 271924 - 272577 637 ## COG0785 Cytochrome c biogenesis protein 268 78 Op 2 3/0.000 + CDS 272597 - 273226 729 ## COG0526 Thiol-disulfide isomerase and thioredoxins 269 78 Op 3 3/0.000 + CDS 273246 - 274172 1032 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase 270 78 Op 4 7/0.000 + CDS 274185 - 274958 1113 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 271 78 Op 5 . + CDS 274948 - 276603 1602 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain + Term 276627 - 276669 7.2 + Prom 276658 - 276717 12.9 272 79 Op 1 23/0.000 + CDS 276753 - 277235 606 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 273 79 Op 2 1/0.103 + CDS 277248 - 279032 2213 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 274 79 Op 3 . + CDS 279050 - 280753 1814 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain 275 79 Op 4 . + CDS 280802 - 281677 1023 ## COG0682 Prolipoprotein diacylglyceryltransferase 276 79 Op 5 . + CDS 281671 - 282975 1370 ## COG1757 Na+/H+ antiporter + Term 283016 - 283063 4.4 - Term 282949 - 282982 4.0 277 80 Op 1 . - CDS 282983 - 285511 2115 ## COG0608 Single-stranded DNA-specific exonuclease 278 80 Op 2 . - CDS 285508 - 287340 1580 ## Ilyop_0494 lytic transglycosylase catalytic - Prom 287406 - 287465 10.0 + Prom 287400 - 287459 9.6 279 81 Op 1 1/0.103 + CDS 287490 - 289262 2195 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 280 81 Op 2 . + CDS 289293 - 289760 592 ## COG1576 Uncharacterized conserved protein 281 81 Op 3 . + CDS 289800 - 290129 585 ## gi|257452677|ref|ZP_05617976.1| hypothetical protein F3_06389 282 81 Op 4 . + CDS 290129 - 290515 367 ## gi|315917694|ref|ZP_07913934.1| predicted protein 283 81 Op 5 . + CDS 290512 - 291744 1391 ## FN0465 hypothetical protein 284 81 Op 6 1/0.103 + CDS 291758 - 293239 2094 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 293268 - 293301 1.0 285 82 Op 1 23/0.000 + CDS 293311 - 293679 460 ## COG1380 Putative effector of murein hydrolase LrgA 286 82 Op 2 . + CDS 293657 - 294349 772 ## COG1346 Putative effector of murein hydrolase + Prom 294351 - 294410 9.4 287 83 Op 1 1/0.103 + CDS 294495 - 294755 335 ## PROTEIN SUPPORTED gi|237739595|ref|ZP_04570076.1| SSU ribosomal protein S20P + Term 294768 - 294800 4.0 288 83 Op 2 . + CDS 294818 - 295393 748 ## COG0778 Nitroreductase + Term 295588 - 295623 0.3 - Term 295314 - 295354 1.1 289 84 Op 1 . - CDS 295368 - 296513 1142 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 290 84 Op 2 . - CDS 296526 - 296606 118 ## 291 84 Op 3 . - CDS 296608 - 298041 1855 ## COG0260 Leucyl aminopeptidase - Prom 298152 - 298211 6.5 + Prom 298034 - 298093 6.5 292 85 Op 1 . + CDS 298184 - 298645 683 ## COG2849 Uncharacterized protein conserved in bacteria 293 85 Op 2 1/0.103 + CDS 298723 - 300309 2375 ## COG0513 Superfamily II DNA and RNA helicases 294 85 Op 3 1/0.103 + CDS 300321 - 301265 968 ## COG1559 Predicted periplasmic solute-binding protein 295 85 Op 4 14/0.000 + CDS 301280 - 302614 1370 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 296 85 Op 5 1/0.103 + CDS 302611 - 304800 1334 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 297 85 Op 6 1/0.103 + CDS 304890 - 305153 399 ## PROTEIN SUPPORTED gi|19705275|ref|NP_602770.1| SSU ribosomal protein S15P + Term 305166 - 305196 0.3 298 85 Op 7 . + CDS 305213 - 306295 1149 ## COG5438 Predicted multitransmembrane protein + Prom 306305 - 306364 5.9 299 86 Op 1 38/0.000 + CDS 306391 - 307926 2289 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 307953 - 307986 5.1 300 86 Op 2 49/0.000 + CDS 308012 - 308938 285 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 301 86 Op 3 44/0.000 + CDS 308953 - 309819 1528 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 302 86 Op 4 44/0.000 + CDS 309840 - 310847 604 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 303 86 Op 5 . + CDS 310837 - 311808 828 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 311816 - 311849 4.5 + Prom 311834 - 311893 5.3 304 87 Tu 1 . + CDS 311919 - 312164 461 ## FN0683 hypothetical protein + Prom 312186 - 312245 8.0 305 88 Op 1 . + CDS 312342 - 312428 110 ## 306 88 Op 2 . + CDS 312498 - 313157 933 ## Clocel_1110 suppressor of fused domain + Term 313189 - 313234 7.1 + Prom 313160 - 313219 11.6 307 89 Op 1 . + CDS 313323 - 316070 3184 ## COG0457 FOG: TPR repeat 308 89 Op 2 . + CDS 316087 - 316452 465 ## FN1835 hypothetical protein 309 89 Op 3 30/0.000 + CDS 316467 - 317078 797 ## COG0811 Biopolymer transport proteins 310 89 Op 4 . + CDS 317091 - 317525 634 ## COG0848 Biopolymer transport protein 311 89 Op 5 . + CDS 317540 - 317683 118 ## 312 89 Op 6 1/0.103 + CDS 317673 - 318320 793 ## COG0810 Periplasmic protein TonB, links inner and outer membranes 313 89 Op 7 1/0.103 + CDS 318337 - 319725 1635 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 314 89 Op 8 . + CDS 319729 - 321165 1937 ## COG2812 DNA polymerase III, gamma/tau subunits 315 89 Op 9 . + CDS 321162 - 321986 720 ## Ilyop_1264 hypothetical protein 316 89 Op 10 16/0.000 + CDS 322009 - 322458 562 ## PROTEIN SUPPORTED gi|237738486|ref|ZP_04568967.1| LSU ribosomal protein L9P 317 89 Op 11 1/0.103 + CDS 322475 - 323815 2063 ## COG0305 Replicative DNA helicase 318 89 Op 12 . + CDS 323840 - 325060 1564 ## COG0826 Collagenase and related proteases 319 89 Op 13 . + CDS 325068 - 325727 795 ## FN0749 hypothetical protein + Term 325736 - 325773 5.1 - Term 325718 - 325766 3.3 320 90 Op 1 12/0.000 - CDS 325769 - 326248 447 ## COG3610 Uncharacterized conserved protein 321 90 Op 2 1/0.103 - CDS 326249 - 327004 582 ## COG2966 Uncharacterized conserved protein 322 90 Op 3 . - CDS 327016 - 327744 887 ## COG4123 Predicted O-methyltransferase - Prom 327855 - 327914 24.3 + Prom 327743 - 327802 10.2 323 91 Op 1 2/0.000 + CDS 327992 - 329137 1706 ## COG1960 Acyl-CoA dehydrogenases 324 91 Op 2 29/0.000 + CDS 329175 - 329972 1098 ## COG2086 Electron transfer flavoprotein, beta subunit 325 91 Op 3 . + CDS 330005 - 331015 1366 ## COG2025 Electron transfer flavoprotein, alpha subunit + Prom 331390 - 331449 80.4 326 92 Op 1 1/0.103 + CDS 331608 - 333416 2558 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 327 92 Op 2 . + CDS 333436 - 335193 2096 ## COG0006 Xaa-Pro aminopeptidase 328 92 Op 3 . + CDS 335206 - 335679 659 ## FN1219 hypothetical protein - Term 335664 - 335706 1.1 329 93 Op 1 . - CDS 335709 - 336332 850 ## COG1272 Predicted membrane protein, hemolysin III homolog 330 93 Op 2 . - CDS 336406 - 338481 2196 ## COG2217 Cation transport ATPase - Prom 338519 - 338578 9.9 - Term 338564 - 338602 5.1 331 94 Op 1 . - CDS 338611 - 339828 1455 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 332 94 Op 2 . - CDS 339880 - 341223 1494 ## COG0534 Na+-driven multidrug efflux pump 333 94 Op 3 1/0.103 - CDS 341233 - 342054 987 ## COG1968 Uncharacterized bacitracin resistance protein 334 94 Op 4 . - CDS 342067 - 343065 1607 ## COG0451 Nucleoside-diphosphate-sugar epimerases 335 94 Op 5 . - CDS 343068 - 343886 869 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) - Term 343899 - 343938 4.8 336 95 Op 1 . - CDS 343947 - 344687 832 ## FN1719 hypothetical protein 337 95 Op 2 1/0.103 - CDS 344706 - 347375 3362 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 338 95 Op 3 . - CDS 347432 - 349462 2056 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 339 95 Op 4 . - CDS 349459 - 350496 884 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 340 95 Op 5 2/0.000 - CDS 350506 - 351780 1242 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases 341 95 Op 6 5/0.000 - CDS 351809 - 353086 1153 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases 342 95 Op 7 1/0.103 - CDS 353101 - 354030 1392 ## COG0517 FOG: CBS domain - Term 354045 - 354076 2.5 343 96 Op 1 1/0.103 - CDS 354089 - 356614 3176 ## COG1461 Predicted kinase related to dihydroxyacetone kinase 344 96 Op 2 1/0.103 - CDS 356633 - 357181 564 ## COG1396 Predicted transcriptional regulators 345 96 Op 3 1/0.103 - CDS 357185 - 358393 239 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 346 96 Op 4 1/0.103 - CDS 358405 - 358908 731 ## COG1267 Phosphatidylglycerophosphatase A and related proteins 347 96 Op 5 1/0.103 - CDS 358912 - 361080 2529 ## COG0826 Collagenase and related proteases 348 96 Op 6 . - CDS 361052 - 361654 487 ## COG0237 Dephospho-CoA kinase - Prom 361688 - 361747 11.0 + Prom 361642 - 361701 8.6 349 97 Tu 1 . + CDS 361801 - 362769 903 ## CLB_1618 AraC family transcriptional regulator + Term 362778 - 362819 5.1 + Prom 362802 - 362861 9.6 350 98 Op 1 35/0.000 + CDS 362911 - 364656 196 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 351 98 Op 2 . + CDS 364649 - 366367 1548 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Term 366379 - 366429 8.0 - Term 366185 - 366225 -0.0 352 99 Tu 1 . - CDS 366420 - 367274 898 ## COG1284 Uncharacterized conserved protein - Prom 367302 - 367361 3.5 + Prom 368510 - 368569 80.3 353 100 Op 1 . + CDS 368805 - 368996 296 ## Mmol_1121 hypothetical protein + Prom 369007 - 369066 10.3 354 100 Op 2 . + CDS 369102 - 369380 451 ## COG2388 Predicted acetyltransferase + Term 369404 - 369437 3.1 + Prom 369443 - 369502 12.5 355 101 Tu 1 . + CDS 369534 - 371075 2101 ## COG2978 Putative p-aminobenzoyl-glutamate transporter + Term 371102 - 371138 5.0 + Prom 371356 - 371415 9.4 356 102 Tu 1 . + CDS 371478 - 372050 614 ## gi|257466610|ref|ZP_05630921.1| hypothetical protein FgonA2_04118 + Prom 372082 - 372141 7.2 357 103 Op 1 11/0.000 + CDS 372265 - 374496 3121 ## COG1882 Pyruvate-formate lyase 358 103 Op 2 . + CDS 374524 - 375249 753 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 375253 - 375308 14.7 - Term 375067 - 375118 -0.7 359 104 Op 1 . - CDS 375317 - 375877 735 ## Plut_0528 exonuclease 360 104 Op 2 . - CDS 375906 - 376520 681 ## COG3142 Uncharacterized protein involved in copper resistance 361 104 Op 3 . - CDS 376513 - 377928 1779 ## COG1027 Aspartate ammonia-lyase - Prom 378017 - 378076 10.4 Predicted protein(s) >gi|224531372|gb|GG658180.1| GENE 1 307 - 864 744 185 aa, chain + ## HITS:1 COG:FN1787 KEGG:ns NR:ns ## COG: FN1787 COG0457 # Protein_GI_number: 19705092 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 12 171 142 296 628 59 28.0 4e-09 MLNTDLLKVKFLSKYTEQELEDYEANLRMKLLGKVNIISSMAKLASLCFFKKDYDTAIYF FEKLMTLDATNGNWPGFLAYVYYEQEKYKKAIPYFEKSVDLSPNSPFIYFLLGNSYSRLG KIKEATWCYELAIFLDFDIYGAHVDFAKKYEKMGQKEKALEEYILAYEIDPRDKKIKKKI DALSQ >gi|224531372|gb|GG658180.1| GENE 2 888 - 1436 758 182 aa, chain + ## HITS:1 COG:FN1990 KEGG:ns NR:ns ## COG: FN1990 COG0484 # Protein_GI_number: 19705286 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Fusobacterium nucleatum # 42 178 1 175 175 87 34.0 9e-18 MSDGLLVVILIIAILAFSGRIQGLSGLLIFGLILFFLGWFTIKFFWIILAIIGINYITRS MKPKTQRRTRYTYRTYSQQDFEDFFRRASGGQYKGQYQGNYSGNHYGNSYGSYVEDLSKY YAILGVVEGASKEDIKKAYLKKVKEHHPDRFATASETEKKFHEEQLKAINEAYDKIEKSY TV >gi|224531372|gb|GG658180.1| GENE 3 1475 - 2833 1603 452 aa, chain + ## HITS:1 COG:FN1991 KEGG:ns NR:ns ## COG: FN1991 COG1207 # Protein_GI_number: 19705287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Fusobacterium nucleatum # 3 448 1 446 446 573 66.0 1e-163 MSLKTLILAAGKGTRMKSDLPKVLHKVNGKPMLHKILDVVNFLQPEENILILGYKREEIL ATLDTCSYVVQEEQLGTGHAILQAKEKLKDYHGDIMVLYGDTPLLREETLQQLYQYHKEQ KATTTVLTAVYENPFGYGRILKKERKVLGIVEEKEATEEQKKIQEVNAGVYCFDSQELWK ALSKINNKNEKGEYYLTDVLSIQAMEGKTVLSYELKDSQEILGVNSKVELAEANQVLRQR KNKQLMEDGVILLDPSITYVEEDVKIGQDTVLAPTVILQGKTIIGKKCEILGNTRIIDSQ LGDNIVVESSVIEESILEDGVTMGPFAHLRPKAHLKKKVHIGNFVEVKKSVLEEGVKAGH LTYLGDAHVGERTNIGAGTITCNYDGVNKFPTNIGKDVFIGSDSMLVAPVNIGENALIGA GSVITKDVPENALAVERNKQIIKNEWRKKNGR >gi|224531372|gb|GG658180.1| GENE 4 2823 - 3773 1190 316 aa, chain + ## HITS:1 COG:FN1992 KEGG:ns NR:ns ## COG: FN1992 COG0462 # Protein_GI_number: 19705288 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Fusobacterium nucleatum # 3 313 5 315 316 510 83.0 1e-144 MVDSVKIFAGTSNKELAQKIAEKYGMELGKAEVVRFKDGEVFVKIDETVRGRDVFVVQPT SEPVNENLMELLIFVDALKRASAKSINVIVPYYGYARQDRKSSPREPITSKLVANLLTKA GVTRLLTMDLHADQIQGFFDIPVDHLQALPLMAKYFKSKGFYGDKVVVVSPDIGGVKRAR KLAEKLDCKIAIIDKRRPKPNMSEVMNLIGEVEGKIAIFIDDMIDTAGTITNGATAIMER GAKEAYACCTHAVFSDPAIERLTASSLTEIIVTDSIRLPERKKIDKVKILSVDELFAEAI KRVVHNQSVSELFEVK >gi|224531372|gb|GG658180.1| GENE 5 3776 - 4384 691 202 aa, chain + ## HITS:1 COG:FN1993 KEGG:ns NR:ns ## COG: FN1993 COG0009 # Protein_GI_number: 19705289 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Fusobacterium nucleatum # 4 202 17 216 217 223 61.0 2e-58 MEVKYQEIGEQIKKGALIIYPTDTVYGIGASIQSEEALIHLYQAKSRNFSSPLIALVDSV ERISEIAYVERKKELLEKLSQKFWPGGLTIILPAKDCVPKIMISGGNTVGVRIPNHEMAL SIIRAAGGILPTTSANISGEATPSSYQELSEAIKRNADIVIDGGVCPVGEASTILDFTKD SIQILRLGAITKEEIEAVIGKI >gi|224531372|gb|GG658180.1| GENE 6 4393 - 4827 643 144 aa, chain + ## HITS:1 COG:no KEGG:FN1994 NR:ns ## KEGG: FN1994 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 143 4 144 144 135 64.0 5e-31 MKTRVNPNAISPMEMNQMSSMMGMMSSLQKIGKGKRKYSIPLDKSSKKFLVRFIDEVKKQ FAGSAMADQNKQIYDFLVYVKEVSEKKESTELKVSFEEEEFLKRMLKDSVRGMETMKFKW YQFVKKRMVKMLTSQYRDLLAKFK >gi|224531372|gb|GG658180.1| GENE 7 4867 - 5847 1451 326 aa, chain - ## HITS:1 COG:FN0405 KEGG:ns NR:ns ## COG: FN0405 COG0180 # Protein_GI_number: 19703747 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 325 1 325 325 520 77.0 1e-147 MKRSLSGIQPSGILHLGNYFGAIDQFVTMQDDYEGFYFVADYHSLTSLTKPENLRENTKN IILDYLSLGLNPEKSTLFLQSDVPEHVELYWLLCNVAPVGLLERAHSYKDKLAKGFTPNM GLFNYPALMAADILIYDADVVPVGKDQKQHLEMTRDIAAKFNQQYEVDFFKLPDPLIMDK VAVVPGTDGQKMSKSYGNTIQMFAPKKQLKQQVMSIVTDSTPLEEPKNPDNNIAKLYALF ANIEKQNEMKEKFLAGNYGYGHAKTELLNAILEYFGNAREKREELAQNPKYVEEILQEGA RKARAIASKKVQEAKEIVGLLGNIYR >gi|224531372|gb|GG658180.1| GENE 8 5971 - 6924 462 317 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 6 315 7 318 319 182 34 2e-44 MKYYAGVDLGGTNTKIGICDAEGKIVSSSSIKTDSIRGVDDTLFRIWTEIQRQVLEQKIE KENLQGIGIGIPGPVKNQSVVGFFANFPWEKNINLQEKMEKISGVTTKLDNDVNVIAQGE AIFGAARGHRSSITVALGTGIGGGIFIDGKLISGMTGAGGEVGHMKLVPDGKLCGCGQKG CFEAYASATGMIREALSRLYVNKQNALYDKFQGNYEKLEAKDIFEAAAAGDIFSQEIVDY EAEYLAMGIGNLLNIINPEVIVLGGGIALAKEQILVPIQTKISKYALEITLENLEIKTGV LGNEAGILGAAALFIVS >gi|224531372|gb|GG658180.1| GENE 9 7070 - 8086 1685 338 aa, chain + ## HITS:1 COG:FN1165 KEGG:ns NR:ns ## COG: FN1165 COG1879 # Protein_GI_number: 19704500 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 338 1 341 341 451 70.0 1e-126 MKKTGIVLGALLLAAGLVGCGEKKEAAAPAENAVRMGLTAYKFDDNFIALFRQAFQTEAD AVGDQVALQMVDSQNDAAKQNEQLDVLLEKGIDTLAINLVDPAGVDVVLEKIKAKELPVV FYNRKPSDEALASYDKAYYVGIDPNAQGIAQGKLVEKAWKENPALDLNGDGVIQFAMLKG EPGHPDAEARTIYSIKTLNDDGIKTEELHLDTAMWDTAQAKDKMDAWLSGPNADKIEVII CNNDGMALGAIESMKAFGKSLPVFGVDALPEAITLIEKGEMAGTVLNDAKGQAKATFQVA MNLGQGKEATEGTDIQMENKIVLVPSIGIDKENVAEYK >gi|224531372|gb|GG658180.1| GENE 10 8181 - 9683 2006 500 aa, chain + ## HITS:1 COG:FN1166 KEGG:ns NR:ns ## COG: FN1166 COG1129 # Protein_GI_number: 19704501 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Fusobacterium nucleatum # 1 500 1 500 500 779 81.0 0 MENLKYVLEMEGITKSFPGVKALDNVQLKVRPHSVHALMGENGAGKSTLMKCLFGIYEKD AGKILLDGIETSFHSTKEALENGVSMVHQELNQVLQRNVLDNIWLGRYPKKGLFIDEKKM YEDTIRIFKDLDINIDPRKKVSELQVAERQMIEIAKAVSYNSKVLVMDEPTSSLTEKEVA HLFRIINKLRDSGVGIVYISHKMEEIKAISDDITILRDGTWVGTDSVKELDTDKIISMMV GRDLTDRFPPKDNEVKEKILEVKNLTGFYQPTIQDISFDLHKGEILGIAGLVGAKRTEIV ETMFGMRKLESGQIFLHGKEVKNTDPKSAIKNGFALVTEERRSTGIFSMLDITTNSTLSN LDKYKNKFGLLENKQMKDATKWVIDSMRVKTPSQSTPIGSLSGGNQQKVIIGRWLLTEPE VLMLDEPTRGIDVLAKYEIYQLMIDLAKKEKGIIMISSEMPELLGVTDRILVMSNGRIAG IVKTSETNQEEIMALSAKYL >gi|224531372|gb|GG658180.1| GENE 11 9703 - 10722 1680 339 aa, chain + ## HITS:1 COG:FN1167 KEGG:ns NR:ns ## COG: FN1167 COG4211 # Protein_GI_number: 19704502 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Fusobacterium nucleatum # 1 339 1 339 339 461 79.0 1e-130 MNIRNKEGKINYKELFIQSGLYLVLFCMLLVIIWKEPSFLSIRNFKNILTQSSVRAIIAL GVAGLILTQGTDLSAGRQVGLAAVISATMLQAVTNVNRVFGLDRELPIIYAIIVVCLVGL VIGVVNGLIVAKLNVHPFIATLGSMTVVYGINSLYYDIVGASPISGFSSKYSSFAQGAVD LGGFSIPYLIIYATIATIIMWTLWNKTKFGKNIFAVGGNPEAAKVSGVNVVLTLVGIYAL SGVFYAFGGFLEAGRIGSATNNLGFMYEMDAIAGCVIGGVSFYGGVGRISGVITGVIILT VINYGLTYVGVSPYWQYIIKGIIIVAAVAFDSIKYAKKK >gi|224531372|gb|GG658180.1| GENE 12 10785 - 10955 305 56 aa, chain + ## HITS:1 COG:AF1349 KEGG:ns NR:ns ## COG: AF1349 COG1773 # Protein_GI_number: 11498945 # Func_class: C Energy production and conversion # Function: Rubredoxin # Organism: Archaeoglobus fulgidus # 1 53 20 72 73 75 67.0 3e-14 MKLYVCEVCGYVYDSTLGDVDHGIPAGTKFEDLPDDWVCPPCGVSKDHFREMEVNK >gi|224531372|gb|GG658180.1| GENE 13 11060 - 11671 801 203 aa, chain + ## HITS:1 COG:no KEGG:Closa_2635 NR:ns ## KEGG: Closa_2635 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 3 197 2 196 198 189 52.0 9e-47 MRKKELKYFTIEDSFGGNQDWFTDPMMNRGGCGAVTACDTCMYFSKYYAQKHLYPFDIEN LTKEKFIEFSNIMKPFLSPRRMGINTLELYMDGFQEYLNSVSDTFLGMRGFLGTEKLDEA EEKVIEQIEKGFPIPYLNLLHQDKSFEDYEWHWFSLIGYEKKEENFFVKAVSYGKVEWLD FRKLWNTGHKQKGGMVLYFLLKR >gi|224531372|gb|GG658180.1| GENE 14 11773 - 12333 760 186 aa, chain + ## HITS:1 COG:FN1983 KEGG:ns NR:ns ## COG: FN1983 COG0450 # Protein_GI_number: 19705279 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Fusobacterium nucleatum # 1 186 1 188 188 293 75.0 1e-79 MSLIGKKVSEFKVQAYHNGEFKEVSNKDFEGKWAAFVFYPADFTFVCPTELADLADHYAE FQKEGCEVYSVSCDTHFVHKAWHDTSDSIKKIQYPMLADPTGKLARDFEVMIEEEGLALR GSFIVNPQGEIKAYEVHDNGIGREASELLRKLRAAKFVAEHGEVCPAKWQPGSETIKPSI DLVGKL >gi|224531372|gb|GG658180.1| GENE 15 12413 - 14059 2501 548 aa, chain + ## HITS:1 COG:FN1984_1 KEGG:ns NR:ns ## COG: FN1984_1 COG0492 # Protein_GI_number: 19705280 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Fusobacterium nucleatum # 1 331 1 331 332 444 73.0 1e-124 MERIYDVIIIGGGPAGLSAGIYAGRAKLDVLLLEKAVPGGQIRITDEVVNYPGILSTTGA GFGEKAAEQAKNFGVEFATEEVIGMDFSGKIKTIKTTSGEYKTLAVVIATGASPRKLGFP GELEYAGRGVAYCATCDGEFFTGLPVFVVGAGFAAAEEAMFLTKYASKVTVIAREPDFTC AKSIGDKVKAHAKIEVKFHTELIEATGDSQLRHAKFKNNETGEITEYHAPDGDTFGIFVF VGYAPETQLFKGVIDLDPAGFIPTNEDLMSNVEGVYAAGDIRPKKLRQVVTAVADGAIAA TNIEKYVQELREELGMVKEEIEEEKVESSSTNSRVLDDAIMQQIQGLAERFEKSVQLVVI QDPEKAEKSAEMLSLVNEIASASDKIQVQHYQKGENPEMEAKIQANFLPVVAFLNDKGEY ARIKYAVVPGGHELTSFLLALYNVAGPGQAVKEEIQQKATEIDERVNLKIGVSLTCTKCP ETVQSAQRIAVENQNVDIEVVDVFGFQDFKKKYDIMSVPAVVMNDKSLFFGQKDIPALLD DIFEKLGK >gi|224531372|gb|GG658180.1| GENE 16 14231 - 19003 4900 1590 aa, chain + ## HITS:1 COG:no KEGG:FN1905 NR:ns ## KEGG: FN1905 # Name: not_defined # Def: 168 kDa surface-layer protein precursor # Organism: F.nucleatum # Pathway: not_defined # 287 1261 195 1127 1487 457 35.0 1e-126 MKEYFNILLLLCSSSFLYANEVENKKEVVVDKHVKWEKYEKAEQKEEDKALVGTFAITGN SIVFKENKGLKNEGQVYGFLESKGEETFDNSLKGALVTDGQGNGVASTAFSSFTNKRDLD REITSIQNKGVISGGSDLSGGDAEVHGSVESVATGNGILAYGVVDYGVILGSDGAGGSSS DSDHKIDGKGGASVSSKDKHKIKEKHKDKHKEKRKHKEKEKEKEKHKHKNKDGKKIKEKI DQKSPKYKGKTDDYYGTNIDGKAGASGGASSHGKSKEEIEIEDGKVLPKIDPKDFTGKSA HINIKKIENLDSISGAVSVKTSDGYQRIQSNILGTGAEVEVHNQPQWRSIAVSSSGNGVS AYTFVTSPTRQNFSTEKENEAKVGEIVNQGNIEGSVDLEAGNYGTLTYVSSYAAGNGVSL SSYSDNNVGHKTITNLEKVKNTGTISGKVIQKAGENTSSGWHEYSDAKSYASANGISLFS RSANARNKTSIAKVGDVENSGVIRGELLSKAGAGNGQILNIAKSSGNGITLYVEGGRIKK EVSINSIKNKGVISGKAILYGGKDAPAYYAKKEEKRFHVDFIEESRKEDGKAENSPKEDL KYQFTEEEKKAANALFLEKQKEIQENRNKKIAKAEQELKESEEIFKTQREGVRKEKDFLL KINKQYVEFLAKEEEKKKQEIDKKEESTKWLYGDTKEKVKKECEVLKKDLENIQKQKELY KKEKIEDFAPEVLLAFYDNNISKLEEELDSLEEEKKTKLKNKGFMSEASFKKQMEEIDKK RKDIEAKIKEFETELKEEKIQSLLALSERRLSLKDRIEYLKKLQEQKPENPMDFIDGKNP NHKQKTIQTMVEAIAAGNGISLQHDSDHKVTLGSFENEGVISGYTEVYRGTDNQEYQRVK WKGSGAGLAFTGEVDTEIKNTGIISGNEFALLSKGKYNRFSYGNSKKFESGFKKVSNYGI LAGRVIVGGYEQRAGNQQDYDYFETIHTDKEKYNNLGLFLVLDKNGNVEKVIKSDKKEQY EGKEIVNLAGEEETYQEKHIKDKIVNAVGKKAAILSEKNQESQIENSVVNAFYNAAKIED GSTLKIKNSVINTNGFGEKSFAVIGDDGRNELHIQNGTVINGKVNLGKGDDRLILEDVNL LFSTDLGEGENTLVFDGKQKDSYSFSSEVRNANMLQVHRDLVFKEKARITNLDSIDIQKG RKMIYYAYGKEDQPFASFKHKEGKLGLIRLSGDGTFLLGTVGNLARIVDTKKIYGWKLLR NNVDTSYVENEKMYEARNALGLSFEELEKMTEGKEISMYQPEIILSHIYQNPYSASKYAT WKNVSAYYHKILDSNFISKNKIHMEMKTWKERKEPVTLQSNSVFINYGLSDTVNIAGDLG VGKQSIKLGGRRVDSDTFMTGLHIKFKKHNFMWTNGFGYLVNNPKDGEALQSSVVYTEAK YEVPISKTTVFTPKISFMLGRALQKEEHLKIEDTSKKEIGNITIPKEKYHFSELNFSFDF KNQYRFGKNTFAWNVGAEYSIPRKLSSTKIIQTEGKLKNEFTWMSPRLEKEWYGFVGSQY QHENGISFNFKYRRSQHKNRIYSFGVGYLF >gi|224531372|gb|GG658180.1| GENE 17 19116 - 20072 281 318 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 22 302 20 284 285 112 33 1e-23 MRRIVENYEYQVGEEDQGKRLDLFLKEQLPEATRSYLEKLITEGYVLCNEKVITKNGRKL KGKEVIQLAIPEEEKMEIVAENIPLDIVYEDKYLLVVNKQANMVVHPALGNYSGTLVNAL LYYCKENLSDMNGVIRPGIVHRLDKDTTGLIIVAKNNQVHSKLALMFQEKTIRKTYVAIV KGRFSEEKKEGRLETLITRDSKDRKKMTVSQIQGKKAISNYRVLLDGDKHSLVEVKIETG RTHQIRVHMKYLNHPILGDIVYGQEDTKCKRQMLHAYRLEFIHPITEEAICLEGKLPEDF IEAGKRVFDGKDVGTVLI >gi|224531372|gb|GG658180.1| GENE 18 20041 - 20673 796 210 aa, chain + ## HITS:1 COG:FN1371 KEGG:ns NR:ns ## COG: FN1371 COG0164 # Protein_GI_number: 19704706 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Fusobacterium nucleatum # 1 210 3 211 215 219 60.0 3e-57 MEKMWEQSLYDFDVEKGEKIVGVDEAGRGPLAGPVVAAAALLKQYDRSLEPIQDSKKLTE KKREALFSVIPQFFYVGIGQASVEEIEKYNILNATFLAMRRALGNLEEQVEIQDATILVD GNFTIRECERKQEAIVKGDAKSLSIAAASIMAKVTRDHELVELAEQYPDYFFEKHKGYGT KVHREKILSLGPIPGVHRDSFLVKILQKKK >gi|224531372|gb|GG658180.1| GENE 19 20684 - 21055 548 123 aa, chain + ## HITS:1 COG:FN1370 KEGG:ns NR:ns ## COG: FN1370 COG0792 # Protein_GI_number: 19704705 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Fusobacterium nucleatum # 3 119 2 118 119 107 52.0 4e-24 MQNNRQKGNEYEERAVHILRENQYQILERNFRIFQGEIDIIAEKDGVLVFIEVKYRKNRN FGYGKEAVDSRKLGKIFRVAEYYKTYCGKQYQKMRIDVIHFLGDTYFWEKDVAWGDEIGC EMF >gi|224531372|gb|GG658180.1| GENE 20 21015 - 21239 275 74 aa, chain + ## HITS:1 COG:FN1369 KEGG:ns NR:ns ## COG: FN1369 COG3478 # Protein_GI_number: 19704704 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Fusobacterium nucleatum # 6 63 1 59 75 63 57.0 7e-11 MWRGVMKLDVKCSKCGSKEYEVRNVILPEKKQGMKLELNLYYVKTCLSCGYSEFYLAKVV DKDEKEVPVPKAEY >gi|224531372|gb|GG658180.1| GENE 21 21202 - 21870 672 222 aa, chain + ## HITS:1 COG:FN1368 KEGG:ns NR:ns ## COG: FN1368 COG1040 # Protein_GI_number: 19704703 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Fusobacterium nucleatum # 12 210 1 198 204 147 39.0 1e-35 MRKKFLFLKRSIRKLFFEDTCSCCQKELKKEESILCQECFQIWKKKSLLRYYEGHYYVHL YQEPIRSWIHEYKFQGRKEFGEIFAKWMKKAFWECYDRNKIDVVVPVPIHEERRLERGFN QTEEILEYLGVSYVRMERCKNTKHLYQYGMKRDRQEIMEAAFYCPVSFEGKNVLLFDDII TTGTTISEMKKAICQKGMPNKIVSFAFALSERVKIEQKSDGN >gi|224531372|gb|GG658180.1| GENE 22 21947 - 22699 1245 250 aa, chain + ## HITS:1 COG:FN1366 KEGG:ns NR:ns ## COG: FN1366 COG0149 # Protein_GI_number: 19704701 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Fusobacterium nucleatum # 1 249 1 250 251 340 72.0 2e-93 MRRTVIAGNWKMNKTNQEAVEMLHQLKEEVAGISEVDIVIGAPFTCLSDAVKETAGSNIR IAAENVYPKASGAYTGEISPKMLKAIGVEYVILGHSERREYFQESDEFINEKVKAVLAEG MTPILCIGEKLEDREAGRTNMVNETQLRGGLAGITKEEASKIIVAYEPVWAIGTGKTATP ELAQETHAEIRKVLVSLFDKVGEEMTIQYGGSMKPENAAELLAQKDIDGGLIGGASLEAK SFAAIVKAGR >gi|224531372|gb|GG658180.1| GENE 23 22715 - 24235 2170 506 aa, chain + ## HITS:1 COG:CAC0712 KEGG:ns NR:ns ## COG: CAC0712 COG0696 # Protein_GI_number: 15894000 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Clostridium acetobutylicum # 2 505 3 510 510 568 57.0 1e-161 MKKPVMLVIMDGWGINEKLEEKNAIRVAKPHNLLQLEEKYPHSRLQASGEAVGLPEGQMG NSEVGHLNIGAGRVVYQPLVEISVDIRNGEFFKKPALVEAFEYAKNHNKKIHFGGLLSPG GVHSHTEHLYGLLAMAKKYELSEVYVHAFLDGRDTPPSSAIDYVKELEEKMKAIGVGKIA SLSGRYYAMDRDKNWDRVELAYKAMVLGEGNHADSAVKAMEDSYSNGKTDEFVLPTIIDK QGKIGKGEVFINFNFRPDRAREITRALNDKEFTGFDREYLALQFYCMRQYDSTIEAKVIY EDKNIAKTFGEVVSEAGLKQLRTAETEKYAHVTFFFNGGKETQYEGEDRILVPSPKVATY DLQPEMSAYEVTEGALKALDSDQYDVIILNFANTDMVGHTGVMEATVKAVQTVDECIGKI ADKILEKDGVLLITADHGNADLMEDPITKVPFTAHTTNLVPCLLVSNRYQDVSLKDGALC DLAPTLLYFLGIEQPEEMNGTCLIEK >gi|224531372|gb|GG658180.1| GENE 24 24463 - 25947 2382 494 aa, chain + ## HITS:1 COG:FN1860 KEGG:ns NR:ns ## COG: FN1860 COG1757 # Protein_GI_number: 19705165 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 3 482 46 525 525 659 74.0 0 MKAFFKLSPVFLLAALMVAGYDALIAAPIATMYACVVAMLTEKTKFQGVIDAAIASVKEI QVALFILMIAYAMAEAFMSTGVGASIIIIALKFGITGKTVALVGAIVTAILSIATGTSWG TFAACAPVFLWLNHIVGGSITLTLGAIAGGACFGDNIGLISDTTIVSSGIQGVEVVRRIR HQGVWSGLVLLSGIILFGVFGVIMDLPSTVGDAAEAISKITPEVWTQLAEERESAVKLLE QVQAGVPLYMVIPLVVVLVLAFAGFQTFICLFSGVILSYVFGYFAGTVGTVNEYLDMCMS GFSDAGGWVVVMMMWVAAFGGVMKMMNAFRPLSDLLGRMARNVKQLMFFNGCLSIFGNAA LADEMAQIVTIGPIIKELVEENVEASEEDMYVLKLRNATFSDAMGVFGSQLIPWHVYIGY YLGIIGIVYPIYEFKPMDLIQYNFIAYIAVISMLVLTLTGLDRLVPLFGLPSEPKVRLRT KEEREAYTASKKAK >gi|224531372|gb|GG658180.1| GENE 25 26134 - 26403 384 89 aa, chain + ## HITS:1 COG:MK1213 KEGG:ns NR:ns ## COG: MK1213 COG3830 # Protein_GI_number: 20094649 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Methanopyrus kandleri AV19 # 2 89 3 90 90 78 40.0 2e-15 MKCIITVLGTDKVGIIAKICTYLSEVNVNILDISQTIIGGYFNMMMIVNMTDANKKMEEV NEELTHIGKKMGVIITMQHEDIFNCMHRI >gi|224531372|gb|GG658180.1| GENE 26 26426 - 27784 1848 452 aa, chain + ## HITS:1 COG:lin0538 KEGG:ns NR:ns ## COG: lin0538 COG2848 # Protein_GI_number: 16799613 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 6 452 5 451 451 593 70.0 1e-169 MISRVEIQETNRMIAEAKLDVRTITMGISLIDCADTDVDKFNEKVYKKITTYAKDLVRVG DEIAKQFGIPVVNKRISVTPIAIAAASCQTNSYVSIAKTLDRAAKDCGVNFIGGFSALVQ KGCTPSDTILINSIPEAMDVTERVCSSVNVGTSRNGLNMDAIKRMGEVIKETAERTKDRD GIGCAKLVVFCNAVEDNPFMAGAFHGVGEADCVINVGVSGPGVVKRALEEVREGDFETLC ETVKKTAFKITRVGQIVAQEAARRLQVPFGIIDLSLAPTPAIGDSIGEIFQEMGLECAGA PGTTAALAILNDNVKKGGVMASSYVGGLSGAFIPVSEDHAMIEAVERGALSLEKLEAMTC VCSVGLDMIAIPGDTSAATISGIIADESAIGMINNKTTAARLIPVVGKEVGDQVEFGGLL GYAPVMKVNSFSCEKFIARGGRVPAPIHSFKN >gi|224531372|gb|GG658180.1| GENE 27 27847 - 28944 1414 365 aa, chain + ## HITS:1 COG:FN1365 KEGG:ns NR:ns ## COG: FN1365 COG0012 # Protein_GI_number: 19704700 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Fusobacterium nucleatum # 1 365 1 364 364 609 84.0 1e-174 MIGIGIVGLPNVGKSTLFNAITKAGAAEAANYPFCTIEPNIGMVTVPDERLNALSEIINP QRVVAATVEFVDIAGLVKGAAQGEGLGNKFLSNIRSTAAICQVVRCFEDENVVHVDGSVD PIRDIEVINTELIFADLETVDKAIEKHKKLAQNKIKESVELMSVLPKAKSHLESFQLLKI FDFTEEEKSLLKNYQLLTLKPMIFAANVAEDDLAEGNAYVEKVREYAKTLGSEVVIVSAK VEAELQEMDDEESKQEFLESLGVKEAGLNRLIRAGFKLLGLQTYFTAGVKEVRAWTIHIG DTAPKAAGEIHTDFEKGFIRAKVVSYEDFIQYRGWKGAQEVGVLRLEGKEYIVQDGDLME FLFNV >gi|224531372|gb|GG658180.1| GENE 28 29024 - 29206 268 60 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237737599|ref|ZP_04568080.1| LSU ribosomal protein L32P [Fusobacterium mortiferum ATCC 9817] # 1 60 1 60 60 107 81 5e-22 MAVPKKKTSKAKKNMRRSHHALAGISLSICSKCGAPKRQHRVCLECGDYNGKQVLATEAE >gi|224531372|gb|GG658180.1| GENE 29 29352 - 30353 1445 333 aa, chain + ## HITS:1 COG:FN0147 KEGG:ns NR:ns ## COG: FN0147 COG0416 # Protein_GI_number: 19703492 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Fusobacterium nucleatum # 1 331 1 332 332 372 62.0 1e-103 MKIALDAMSGDFAPHSTVEGAVLFTKEIAETEIILVGKEEVIREELKKYSYDKERIRIQN AKEIIEMTDHPVEAIRNKKDSSMNVALDLVKKGEADACVSSGNTGALLSASQLKLKRIKG VLRPAIASVFPSKKGQIVMLDLGATADCKAEYLNQFSSLASKYAELLLGVNSPRVGLLNI GEEVGKGNELTREAYTLLQTNQSIHFIGNIEATQMMEGKVDVVVTDGFTGNMVLKTAEGT AKLITSLLKETIQESLLSKIGALFLKKSFIHLKEKMDSSEYGGAIFLGLNEISIKAHGNS NANGIKNALKVADKFSKINLIEQLKKVIEEEAN >gi|224531372|gb|GG658180.1| GENE 30 30350 - 31336 1350 328 aa, chain + ## HITS:1 COG:FN0148 KEGG:ns NR:ns ## COG: FN0148 COG0332 # Protein_GI_number: 19703493 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Fusobacterium nucleatum # 1 328 1 328 328 436 64.0 1e-122 MKSVGIKGLSSYVPEKVMTNFDFEKIIDTSDEWIRTRTGIEERRFAKPEQATSDLCYEAT RKLLAERAIDPKEIDFIMVCTCTPDYPVPSTACILQSKLGIMGIPAVDINAACSGFMYGL TMAASMAQTGLYKNILVIGAETLSRILDMQDRNTCVLFGDGAAAAIVGEVEEGSGILATH LGAEGENDGILQIPGGGSKYPHTLESIEERKQFVKMKGQNVYKFAVHALPDATLAALEKA KISPNQVTRFFPHQANLRIIEAAAKRMNVPVDKFHVNLHKVGNTSAASVGLALADALEKG MVKKGDYVALTGFGAGLTYGSVVMKWAY >gi|224531372|gb|GG658180.1| GENE 31 31347 - 32261 1339 304 aa, chain + ## HITS:1 COG:FN0149 KEGG:ns NR:ns ## COG: FN0149 COG0331 # Protein_GI_number: 19703494 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Fusobacterium nucleatum # 1 298 1 298 299 397 71.0 1e-110 MGKVAFVFPGQGTQYVGMGKDLYEKSPRAKEILDKMFQSLDFDLKSIMFEGTAEDLKQTK YTQPAIVALSLTLMELAKEKGLKADYVAGHSVGEYTAYGAAGMLSFEEAICLTAARGQIM NDVSEKVNGTMAAVLGMPAEKIQEVLAGMDGVVEAVNFNEPNQTVIAGQKAVVEAACLAL KEAGARRALPLAVSGPFHSSLMKEAGEKLKEEAEKYHFSMTEIGLVANTTAEVLTSVEDV KNEIYHQSFGPVYWVKTIEYLVAAGVDTIYEIGPGKVLSGLIKKINKEITVKNIETLEEI ENLM >gi|224531372|gb|GG658180.1| GENE 32 32300 - 32524 499 74 aa, chain + ## HITS:1 COG:FN0150 KEGG:ns NR:ns ## COG: FN0150 COG0236 # Protein_GI_number: 19703495 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Fusobacterium nucleatum # 1 74 1 74 75 84 71.0 4e-17 MLDKIREIVVEQLGVEPEQVVMEASFTEDLGADSLDTVELIMAFEEEFGVEIPDTEAEKI KTIKDVVDYVEAHQ >gi|224531372|gb|GG658180.1| GENE 33 32594 - 33841 2085 415 aa, chain + ## HITS:1 COG:FN0151 KEGG:ns NR:ns ## COG: FN0151 COG0304 # Protein_GI_number: 19703496 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Fusobacterium nucleatum # 1 414 1 412 413 541 67.0 1e-154 MRRVVVTGLGMISPLGINLKNSWERLLQGECGISKIESYDASEMPVQIAAEVKDFNPMDF GIEKKEVKKLARNTQFAIAASKMALEDSKLNLEETNPFDIGVVISSGIGGMEIFEDQHKN MLEKGVKRISPFTIPAMISNMAAGNVAIYLGLQGPNKSVVTACASGTNSIGEAFEEIKLG KAQIMLAGGTEAAITPFAQNAFANMKALSDTHNEEPQKASRPFSKDRDGFVMGEGAGILV LEELEHAKARGAKIYAEMVGYGSSCDAYHITAPYESGVAAAHAMTMAMKEAGVKPEEVEY INAHGTSTPANDKTETKAIKVALGEENAKKVWISSTKGALGHGLGAAGGLEGVIIAKVLE TGMVPPTINYETPDEECDLDYVPNVKREKEIRVAMSNSLGFGGHNAVILMKKYQD >gi|224531372|gb|GG658180.1| GENE 34 33851 - 34549 701 232 aa, chain + ## HITS:1 COG:FN0152 KEGG:ns NR:ns ## COG: FN0152 COG0571 # Protein_GI_number: 19703497 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Fusobacterium nucleatum # 3 231 2 230 234 270 60.0 1e-72 MSKNLVDLEHRINYYFNDKNLLKNALIHRSFGNEHKHYKNINNEKLELLGDAVLGLVVAE YLYQKYPEEKEGVLAKIKSMAVSEPVLASISRKLRIGEYLLLSKGEMVTGGRDRNSILGD VFEAILGAIYLDSGFFAAKEYVLFHLKDMIDHIDDFEEILDFKTILQEYCQKKYRDIPKY TLVGEEGPDHRKLFEMQVQIQNNIAKAKGTNKKVAEQMAAKQLCKELGVKWL >gi|224531372|gb|GG658180.1| GENE 35 34546 - 35592 1281 348 aa, chain + ## HITS:1 COG:FN0153 KEGG:ns NR:ns ## COG: FN0153 COG1243 # Protein_GI_number: 19703498 # Func_class: K Transcription; B Chromatin structure and dynamics # Function: Histone acetyltransferase # Organism: Fusobacterium nucleatum # 1 334 1 334 348 363 52.0 1e-100 MRHYNIPIFISHFGCPNHCVFCNQKKINGQETDIQVEDIHRIVKEYLKTLPKKSEKEVAF FGGTFTGLSMELQREYLEALQEYIERGDIQGIRLSTRPDYIQKDILEQLRKYGVKAIELG IQSLDEEVLRRSDRFYTEKQVLSSIQQMQSYGFEVGIQIMVGLPGSSLEKEIKTIKTLIA YQPDTARIYPTLVLEDTILEKQYHQGEYQALTLEEAVERSRILYAYLEQAGIRTIRLGLQ ATEELSKEKTMVAGPYHPAFRELVETEIAYVFLKDIFEKEGVQTIFCTETEVSRIVGLKK KNKERFGKDFQVKIQNNLSEGQVLIGNKVYSREERIRRNLDVGTSMDF >gi|224531372|gb|GG658180.1| GENE 36 35567 - 36844 1076 425 aa, chain + ## HITS:1 COG:slr1129 KEGG:ns NR:ns ## COG: slr1129 COG1530 # Protein_GI_number: 16329250 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Synechocystis # 61 351 83 389 674 131 28.0 3e-30 MWELLWTSDLFHHKVAIFRDNELWDLRIEEKDKIVRNGFYLAKKEKEHFLLLSSGEKVFC SEAFPNGQEKIVQVLQEEREEKLAQVSQKLEMTNPYFVFFPYGKGIFLSKKMEEEQERKR LREIFQKYEEKGSFLIRTEAKGMLERNLEQEIQQVLKEWQLVQERAFHLKKKGNLRSTVV WIEEILEEYGKQDWKTCYCENFELKETLKEKLTFYQKQVREYHGEISLWKQRKLEEQIRV LCQEKIDLASGGYLWIESTRACVTIDVNSGAGSPRRSNIEAAREIPRQVKLRNLAGNIVI DFINCKNVEEKKEIVSILKEGFSRDHHFIQWGNFHDFDLFLFSRQRKGKELSFYYSEESL FYQVQCLEEECNDLLEQKEKILLIEGEKNILQEWKKQTQCGIKDSIDFQYRKEEKESKKF HIEIK >gi|224531372|gb|GG658180.1| GENE 37 36856 - 37353 290 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 2 157 4 156 164 116 41 1e-24 MRVGIYAGSFDPITKGHQDIIRRALKIVDKLIVLVVNNPSKKYWFNIEEREAMILESMES QYREKIEIHRYEGLLVDFMREKGVNLLIRGLRAVSDYEYEMGYAFTNKELSQGKAETIFI PASREYMYLSSSGVREIAINQGDISAYVDKALEEKIKLRAKELVK >gi|224531372|gb|GG658180.1| GENE 38 37357 - 38739 1607 460 aa, chain + ## HITS:1 COG:FN0157 KEGG:ns NR:ns ## COG: FN0157 COG1066 # Protein_GI_number: 19703502 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Fusobacterium nucleatum # 1 458 1 450 452 609 74.0 1e-174 MAKTKSVYYCTECGYQSAKWLGRCPSCQEWGTFEEEVALPKELQKQFHSSSSSGNLGEKV KALSEVTMESSERYTTSMGEFDRVLGGGLLQGEVVLLTGNPGIGKSTLLLQVASCYTEYG DVIYISGEESPSQIKNRSERLGIDEKGLLLFTETDILSIYEYLLKKKPKVVMIDSIQTIY NSALDSISGTPTQIRECTLKIIELAKTYGISFFVVGHITKDGKVAGPKILEHMVDAVFNF EGEEGLYYRILRSTKNRFGSTNELAVFSMEEDGMKEIKNSSEYFLSEREEKNIGSMVVPI LEGTKVFLLELQSLLTDVSIGIPKRVVQGYDRNRLQILIAIAERKLYLPLGMKDVFINVP GGLNISDPAADLALLISMLSAYHSVEISQKIAAIGELGLRGEIRKVFFIEKRLRELEKLG FKGVYVPEANRKELEKKQYHLKIIYLKNLEELLERIKEGR >gi|224531372|gb|GG658180.1| GENE 39 38736 - 39785 705 349 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764769|ref|ZP_02171823.1| ribosomal protein L18 [Bacillus selenitireducens MLS10] # 13 342 20 351 360 276 41 1e-72 MIQYDLVEIFEKIAPGTPLREGIVNILDGRLGALLILGYDEEVEKVLDGGFFINCDYTPE RLFELAKMDGAIILDEKCEKILYANVHIQADAKYPTSESGTRHRTAHRASQQLKKLVVAV SERKSVVTVYQGIGKYRLQNLSVLMEEATQALKILERYRYVLDKALVNLTLLELDDLVTV FDVITMAQRFEMIARIENELVGYVRELGKEAHLISSQLKELTQDIELEHLEFMKDYLKEE SKIELVKKKIHQLTDQELLEAEVLADVFGYGKTYSVLDNKVSSRGYRILGKISKLTKKDI EKMVSTYGNIAEIQEAEDDDLLEIKLSKFKIRAMRTGIQRLKFTVELTR >gi|224531372|gb|GG658180.1| GENE 40 39857 - 40255 623 132 aa, chain + ## HITS:1 COG:no KEGG:FN1852 NR:ns ## KEGG: FN1852 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 132 2 123 126 125 55.0 4e-28 MKKLILLFSLLFAATGYASTYKDGIYRGYYISGQETQIEVQFTLKNDVMTEAKYRTLQYK NHDWLKEENFVKMNKGYMGALNYMVGKKVDQAVLDKLYTPEGIEKAGATVRGGKLRHAVQ LALMAGPIKITK >gi|224531372|gb|GG658180.1| GENE 41 40406 - 41713 526 435 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229254937|ref|ZP_04378866.1| SSU ribosomal protein S12P methylthiotransferase [Capnocytophaga ochracea DSM 7271] # 1 433 6 431 433 207 30 6e-52 MKKATVITYGCQMNVNESAKMKKIFENLGYEITEDIRESDAIFLNTCTVREGAATQIYGK LGELMQVKADRGSIIGVTGCFAQEQGKELLKKFPVIDIVMGNQNIGRLPQAIENIENQTE KHVVFTDHEDDLPPRLDADFGSDQTASIAISYGCNNFCTFCIVPYVRGRERSVPLEEIVR DVDQYVKKGAKEIMLLGQNVNSYGHDFKNGDTFAKLLTEICKVEGDFIVRFVSPHPRDFT DDVIEVIAKEDKIAKCLHLPLQSGSSQILKRMNRGYTKEQYLALAHKIQDKISGVALTTD IIVGFPGETEEDFLDTLEIVREINYDNAFMFMYSIRQGTRAATMQEQIPEDIKKERLQRL MDVQARCSYKESQKYQGKTVRVLVEGESKKNKEVLSGRTSTNKIVLFQGPISLKGSFVDV EIYECKTWTLYGKLV >gi|224531372|gb|GG658180.1| GENE 42 41730 - 42971 1130 413 aa, chain + ## HITS:1 COG:FN0476 KEGG:ns NR:ns ## COG: FN0476 COG1158 # Protein_GI_number: 19703811 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Fusobacterium nucleatum # 1 409 1 409 413 525 64.0 1e-149 MEILESFLVNELYEVAKQLGVPCKKGLKKGEIKILLEKYFEENPNHTMASGYLEVLPDGY GFLRNTSVEKDIYISASQIRKFKLRTGDLVMGEVRKPTGEEKNFAVTKILRINNGNLAAA ESRIPFEDLVPAYPTEQFHLETGKESISSRVIDMVAPIGKGQRALIIAPPKAGKTMLISS IANSLIRNYPKTEVWILLIDERPEEVTDIKENVTGAEVYASTFDEDPRNHIKVTESILEK AKRKVEDGEDIVILMDSLTRLARAYNIIIPSSGKLISGGIDPTALYYPKNFFGTARNIRG GGSLTIIATVLVDTGSKMDDVIYEEFKSTGNCDIHLDRHLSELRIFPAIDIQKSGTRKEE LLIGKKKLDKVWKIRRMLSKMDRATAAQTLIRGMKKTENNEGLLSLFIKEGEH >gi|224531372|gb|GG658180.1| GENE 43 42975 - 44126 1288 383 aa, chain + ## HITS:1 COG:FN0477 KEGG:ns NR:ns ## COG: FN0477 COG0739 # Protein_GI_number: 19703812 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Fusobacterium nucleatum # 54 383 7 320 321 272 49.0 7e-73 MKQRGSIVILSVIILFLFVRLQEESKKEIVNLEEFTDYYETSVADNGGFELIESFYNFER VYNFPNQYIEVAKKEEETKKEETKYPKKSTYIVRKGDTPSKIAARFGMSLNSFRANNPNM DKSFKVGTSVNVVSEDGVFYKLQKGDSVSRIAVKYKVKAADIVKYNNISPKKMRVGQEIF LKSPDYKAFLEKEKPKLTKKEIDKKLKEKQEKEDQKIYAENKKTGKKSKQKQEQVNEGEN VETSSGDSGEVASTGGGGGFSMPVRYAGVSSPYGSRFHPILKRYIFHSGVDLVAKYVPLR AAKSGVVTFAGNMSGYGKIIIIKHDNGYETRYAHLSQISTRVGERVERGELIGKTGNTGR TTGPHLHFEIRRSGKTLNPMKYL >gi|224531372|gb|GG658180.1| GENE 44 44139 - 45212 1254 357 aa, chain + ## HITS:1 COG:FN0478 KEGG:ns NR:ns ## COG: FN0478 COG0821 # Protein_GI_number: 19703813 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Fusobacterium nucleatum # 5 356 1 352 354 483 73.0 1e-136 MVLEMGRKSREVQIRDLKLGKGNPVIIQSMTNTETSDVEATVRQILDLEEAGCELVRMTI NTKEAAMAIPAIKERVHIPLVADIHFDYRLALLAMENGIDKLRINPGNIGSEDKIFLVVE KAKEKKIPIRIGVNSGSLEKHILEKYGTVTADAMVESAMYHVKLLEKYGFYDIVISLKAS NVAMMVEAYRKIQTLVDYPLHLGVTEAGTAFQGSIKSSIGIGSLLVDDIGDTIRVSLTEN PVEEIKVAKEILKVLGLRKEGVEIVSCPTCGRTEIDLISLAKTVEKEFAKEKRNIKIAVM GCVVNGPGEAREADYGIAGGKGIGILFQKGKIVKKVQEKDILKELKNMIEEDLKRKN >gi|224531372|gb|GG658180.1| GENE 45 45269 - 45721 592 150 aa, chain + ## HITS:1 COG:FN0479 KEGG:ns NR:ns ## COG: FN0479 COG1595 # Protein_GI_number: 19703814 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Fusobacterium nucleatum # 1 149 1 149 149 180 73.0 1e-45 MDFDEIFEQYFDKVYYKVLGIVKNSDDAEDISQEVFISVYKNLKKFKGESNIYTWIYRIA INKTYDFLKKNKTMLEINEEILSLEYNVDMNTNMILTEKLKKISMQEREFVILKDIYGYK LKEIAEMKDMNLSTVKSIYYKAIRDMGGNE >gi|224531372|gb|GG658180.1| GENE 46 45718 - 46041 399 107 aa, chain + ## HITS:1 COG:no KEGG:FN0480 NR:ns ## KEGG: FN0480 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 4 107 2 101 101 81 46.0 1e-14 MMTSPKERVRANIYKELLEQEKRRNKKLSVVSVSVFLLGVFATSGYNALYRTSTVGQAPS YVMGAEKQVKEFEKDSFMLDSIYNTGVLHEKTVTLNPDELFGLDTQI >gi|224531372|gb|GG658180.1| GENE 47 46055 - 46456 555 133 aa, chain + ## HITS:1 COG:no KEGG:FN0481 NR:ns ## KEGG: FN0481 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 8 131 7 132 132 100 42.0 2e-20 MKKLLVYIVFVLSSFAMFGESEFGIIQDSELRRVGVSEANLRQAKAVINKAETTYKMLVL ERREIELKINKLMMENPAKNLSTLDTLFDRIGVIEAKILKDKVRSQIEMQKYISQDQYVQ ARELSIQRLNKRK >gi|224531372|gb|GG658180.1| GENE 48 46554 - 46796 381 80 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739934|ref|ZP_04570415.1| LSU ribosomal protein L31P [Fusobacterium sp. 2_1_31] # 1 80 1 80 81 151 87 4e-35 MKKGLHPEYNVVVFEDMAGNQFLTRSTKMPKETTMYEGQEYPVIKVAVSSASHPFYTGEM RFVDTAGRVDKFNKRYNLGK >gi|224531372|gb|GG658180.1| GENE 49 47212 - 47835 917 207 aa, chain + ## HITS:1 COG:FN0483 KEGG:ns NR:ns ## COG: FN0483 COG0035 # Protein_GI_number: 19703818 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Fusobacterium nucleatum # 1 207 8 214 214 351 84.0 6e-97 MAVIEVNHPLIQHKLTILRNKDTDTKSFRENLSEIAKLMTYEATKNLKVMEEEVETPLMK TTGYTLEEKVAIVPILRAGLGMVEGIQSLIPTAKVGHIGVYRNEETLEPVYYYCKLPTDI EKRRVILVDPMLATGGSAVYAIDYLKSQNVKDIVFMCLVAAPIGIEKLLNKHPDVAIYTA KIDQGLTENGYIYPGLGDCGDRIFGTK >gi|224531372|gb|GG658180.1| GENE 50 47919 - 48161 406 80 aa, chain + ## HITS:1 COG:FN0244 KEGG:ns NR:ns ## COG: FN0244 COG2608 # Protein_GI_number: 19703589 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Fusobacterium nucleatum # 26 80 1 55 56 59 60.0 1e-09 MNLEKTDRYKNKGGKDMRKVLKIDGMGCEHCVKSVKEALSTLEGLSLLEVKIGEATVEMA EDYDMKKIQEALDDAGYDLL >gi|224531372|gb|GG658180.1| GENE 51 48158 - 50383 3013 741 aa, chain + ## HITS:1 COG:FN0245 KEGG:ns NR:ns ## COG: FN0245 COG2217 # Protein_GI_number: 19703590 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 6 739 24 769 769 723 53.0 0 MKKEILEISGITCQACVAKIERKVSRMDGVEQVNVNLSTGIGTFSYDSGKVKLEEIIAMI EKLGYEGKVPQKEDKEAKKREKEERLRKEKREFQIIFFFSVIVFYISMGSMMGLPLPRVI SMEENPILFALMQLCFSIPVLYLGRHFYQKGLKQLFLRAPNMDSLIAVGTGAAFLYSLYG FYRITQGEIHYVHHLYFESSVMILAFISLGKYLEKRSKGKTSEAIQKLMDMQVVVAHKIV GENILSVPLEEVELQDILLVKAGEKIPLDGIILEGESTINESMLTGESIPVSKKVGDTVY GATINGEANLKIKVEAVGEDTVIAKIIHLVEDAQGTKAPIAKLADEISLYFVPVVMMIAI VAALFWYFVMGKDFLFSITIFVSVMVIACPCSLGLATPTAIMVGTGRGAELGVLIKSGEA LQKAQEMTAIVFDKTGTLTEGKPELEKILSYESGEWLRIAASLEQYSEHPLGRAVIEAVK REGLSFFEIENLEILVGRGISGKKDGKSYFLGSPKGVLEFGGSLENTGEVVSYEEEGKTV LYLVEEGKTVASFIVADQMKEESKQVLEILKNKGFSLAMITGDKKETAESIAKKIGMDTV FAEVSPEDKYLKVKELQEQGKKVIMVGDGINDSPALMQADLGIAMGGGTDIAMESADIVL MKKNLFGILDALDLSEATMKNIKQNLFWAFLYNSLGLPLAAGVLYPFTGHLLNPMIAGFA MAMSSVSVVTNALRLRYFKRG >gi|224531372|gb|GG658180.1| GENE 52 50385 - 50786 493 133 aa, chain + ## HITS:1 COG:BS_cdd KEGG:ns NR:ns ## COG: BS_cdd COG0295 # Protein_GI_number: 16079584 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Bacillus subtilis # 7 128 4 125 136 129 46.0 2e-30 MEEKEIRALIQKAMEVRKNAYAPYSKFLVGAVLIDEEGREYRGVNVENTSYGLSSCAERN AIFSGVAKGMKKIAVLCVVGDTEDPIRPCGACRQVILEFANEDTKIILSNLHGKYEVFSI EDLLPNSFFVKIY >gi|224531372|gb|GG658180.1| GENE 53 50886 - 52262 1717 458 aa, chain + ## HITS:1 COG:FN1858 KEGG:ns NR:ns ## COG: FN1858 COG2031 # Protein_GI_number: 19705163 # Func_class: I Lipid transport and metabolism # Function: Short chain fatty acids transporter # Organism: Fusobacterium nucleatum # 1 458 1 458 458 667 75.0 0 MEQKKEKKGIFKKFTSASVSLMQRWLPDPFIFCAILTFFVFVASLLFTKASVFDVIGYWS GGFWSLLAFSMQMALVLVTGHTMASSPVFKKLLENMASKLKTPRQAIIVVTVVSTIACIL NWGFGLVIGAIFAKEIAKKLKGVDYRLLIASAYTGFLVWHGGLSGSIPLQLASGGEALKQ QTLGVISEAIPTSQTLFSPMNLYIVIGLLILLPIINVAMYPSHDEVVTVDLALLKEVEPV VIDSKKMTPAEKIENGRLVSYALGLMGYVYIIKYLMENGFALNLNIVNFIFLFTGIIFHG TPRRYLDALAEAIKGAAGILLQFPFYAGIMGIMVGADVDGNSLAGLMSNFFVNISTPRTF PVFTFLSAGIVNFFVPSGGGQWVVQAPIVMPAGQMIGVTAAKSAVAIAWGDAWTNMVQPF WALPALGIAGLGAKDIMGYCLIVTIISGLFICSGFLLF >gi|224531372|gb|GG658180.1| GENE 54 52290 - 52940 1040 216 aa, chain + ## HITS:1 COG:FN1857 KEGG:ns NR:ns ## COG: FN1857 COG1788 # Protein_GI_number: 19705162 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Fusobacterium nucleatum # 2 216 3 217 217 322 81.0 2e-88 MKKIVSMEEAISHIKDGMTVHIGGFLAVGTPENIITALIEKGVKDLTIVANDTGYPDRGI GRLVLNNQVKKVIASHIGTNPETGRRMQSGEMEVELVPQGTLAERVRAAGCGLGGVLTPT GLGTIVAEGKDIVTVDGKDYLLEKPIKADVALLLGTTVDKAGNVIFAKTTKNFNPLMGTA ADLVIVEAEKIVEVGEIDPDHVMLSKIFVDYIVEGK >gi|224531372|gb|GG658180.1| GENE 55 52953 - 53618 1015 221 aa, chain + ## HITS:1 COG:FN1856 KEGG:ns NR:ns ## COG: FN1856 COG2057 # Protein_GI_number: 19705161 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Fusobacterium nucleatum # 1 218 1 217 217 336 79.0 2e-92 MELDKKLVREYIAARVAKEFHDGYVVNLGIGLPTLVANFVPEGMEVIFQSENGCIGVGPA PAPGQEDPHAINAGGGFITALPGAQYFDSATSFGIIRGGHVDATVLGALEVDKEGNLANW MVPGKMVPGMGGAMDLVVGAKHVIVAMEHTSRGAIKILDKCTLPLTAVKVVDMIITEKCV FKITDKGLVLTEISPYSSLEDIKATTAAEFTVAEDCKQLSL >gi|224531372|gb|GG658180.1| GENE 56 53789 - 55090 1880 433 aa, chain + ## HITS:1 COG:CAC3014 KEGG:ns NR:ns ## COG: CAC3014 COG0422 # Protein_GI_number: 15896266 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Clostridium acetobutylicum # 3 433 2 432 436 568 65.0 1e-162 MREYFTQMEAAKKGIVTPEMKIVAEKEKMDVEKLRDLVAKGQVCIPCNINHKNISPEGIG TGLKTKVNVNLGISGDKRDYEEEFKKVDLAIQYGCEAIMDLSNYGKTNTFRKKLIEKSPA MIGTVPMYDAIGYLEKDLQDMEVKDFLEVIEAHAKEGVDFMTIHAGLTRRAVEFLKKQER LTNIVSRGGSLLFAWMETKKQENPLYEYYDQVLDILRKYDVTISLGDGLRPGSNHDSTDA GQLAELIELGYLTKRAWEKDVQVMVEGPGHMAINEIAANMQIQKRLCYGAPFYVLGPLVT DIAPGYDHITSAIGGAIAASSGADFLCYVTPAEHLRLPDVEDVKEGIIATKIAAHAADIA KGIPGARDWDNKMSDARRRLAWEEMFELAIDEEKARRYFNSRPVEVKDSCSMCGKMCAMR TVNRILEGKDINI >gi|224531372|gb|GG658180.1| GENE 57 55143 - 56477 1243 444 aa, chain - ## HITS:1 COG:FN1940 KEGG:ns NR:ns ## COG: FN1940 COG0534 # Protein_GI_number: 19705245 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 2 443 3 444 456 561 69.0 1e-159 MIHWNMIREILSLALPAVGEMTLYMMIWILDTMMVGQYGGKLAVSSVGLSTEIIYSFFNI LIAMGMSSSLTSLISRALGAKDFKKAERIANAGFKISFGLAILFFLVLFFVPKQILTLAG ATKDMLPSAVIYAKISAFSFFLLTFSSTNNGIFRGAKDTKTSLYIAALINIVNLSLDYAL IFGKFGFPELGVKGAAIATVAGNGAGLLLQWFRLKKLPFHLHLFSSSKKEDFKEVILLAV PSALQEANFSLSKLLGITFVMSLGTIAFAANQIGIAIEAVSFMPGWGIAIANTALVGHSI GEKNEKKAHDYTFYSTIIASIFMGIIALIFFFFPEELIRLFIQKEEIEVIAAGALCLQVG AMEQIPIAFAMVIESYFKGTGDAKTPFYVSFIMNWCIRVPLAFYFISIQKYPIHIFWLIT TIQWTLEGILIYYLYHRKGKIILH >gi|224531372|gb|GG658180.1| GENE 58 56486 - 58270 526 594 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 186 573 24 407 425 207 35 6e-52 MIYGNTEGMKEFTLQQLEQLYEIKLNKGQLISEEIAIFLANISTKINKEINLCIDRNGNI TEISIGDSSTVSLPFIPVYEKKLSGKRIVHTHPNGNPKLSSVDISALLKLKLDAILAIGC VEEKVTGIGLALCNLEEDVIHYEEYLYSSFEELENFPFLEKLQSIETALRRKNIVEDEKE YAVLVGIDSKTSLQELEELAYACNIEVVGHFFQNRSKADKVLFLGPGKARELSLFQQIKR ANLIIADEELSGLQVKNLEEVTGCKVIDRTTLILEIFARRARSREAKIQVELAQLKYRSN RLIGYGVTMSRLGGGVGSKGPGEKKLEIDRRRIRENISFLKKELENIKKTRSVQREKREN SNIPKIALVGYTNVGKSTLRNLLAAEYNPNSNTKEDVFAENMLFATLDTTTRTILLDDKR LVSVTDTVGFIRKLPHDLIEAFKSTLEEVIFSDLILHVVDSSSEEALSQMEAVYQVLEEL QCQNKKNILVLNKCDLASPEQILSIREKYSHITAVEISAKEHKNIDVLLEEIKKELPQNT KTCMYLIPYSDSSMVAYLHKTSTIQEEKYEAEGTFIKAIVNQETENRCKQFEIE >gi|224531372|gb|GG658180.1| GENE 59 58471 - 59652 1768 393 aa, chain + ## HITS:1 COG:Cgl2969 KEGG:ns NR:ns ## COG: Cgl2969 COG1301 # Protein_GI_number: 19554219 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Corynebacterium glutamicum # 6 390 5 387 412 316 50.0 5e-86 MKKIGLLPRLIIGLVVGILLGMSGIEIIIRLLGTFNSIFGNFLGFVIPLIIVGFVAAGIA DLGKDAGKLLGVTVAIAYVSTVISGTFAYFVDTTIFQQLHLEDAAEMIKAAEANARSLSP LFTVDMPPIMGVMTALLIAFTLGIGAAVINSEVLKKGMQEFQAIVEKVISNIVIPFLPLH ICGIFANMTYEGKTAAIMSVFVKVFIIIIILHAIIILFQYTIAGTIAGGNPIKLIKNMIP AYLTAIGTQSSAATIPVTLRQTKKNGVSDGVADFAIPLCATIHLSGSTITLTSCSLALMI IYGMPHGFATMFGFILMLGITMVAAPGVPGGAVMAALGLLGSMLGFNEELLSLMIALYLT QDSFGTACNVTGDGAIAVLVNKFAGNKLETKED >gi|224531372|gb|GG658180.1| GENE 60 59772 - 60101 481 109 aa, chain + ## HITS:1 COG:no KEGG:FN0737 NR:ns ## KEGG: FN0737 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 109 1 109 109 155 68.0 7e-37 MPHLKVRGLEKKVLIEKSKEIIDGLTEIIQCDRTWFTIEHIDTEYIFDGKIQEGYSFIEL YWFERGEEIKKRVAAFLTEKMKEMNGNKDACIIFFPLLGENYCDNGVFF >gi|224531372|gb|GG658180.1| GENE 61 60114 - 60971 314 285 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains [Anoxybacillus flavithermus WK1] # 45 284 35 280 285 125 34 2e-27 MIKVGKRQTMLVDHFASVGAYLVPVLVEEEEEKIEILLPNNELEERELQEGEEVEVLIYR DSEDRLIATFRKTEALVGTLAKLEVVDTNPRLGAFLDWGLTKDLLLPVSQQEVRAEIGKR YLVGIYEDSKGRLSATMKIYNFLLPNHDFSKNDTVKGTVYRVNDEIGVFVAVEDRYFGLI PKSECFQAFEVGEELDLRIIRVREDGKLDVSPRVILSEQISKDAEVILQKMRILKDHFRF NDDSSPEDIKDYFSMSKKAFKRAIGQLLKQGLIDKKEDGYFSLKK >gi|224531372|gb|GG658180.1| GENE 62 61360 - 63048 2559 562 aa, chain + ## HITS:1 COG:FN1499 KEGG:ns NR:ns ## COG: FN1499 COG5295 # Protein_GI_number: 19704831 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 388 562 313 479 479 100 35.0 7e-21 MLEEKSVKHWLKRKVKFTEALLVAFLITGGIASAESANASSSNKMKYYGVSEESMPGTGE KEPKNEYGEGARGGKKSIAIGENARVGTWKRIWESHIGTVNEGYNFYYGKAKDYKLTEDD VDKVYFSDGDNSVVLGNDAKADYANSVVIGTQADSTRGNSNVVVGHKAKLSGYNGVVIGE NSRGSSTNLGVIAIGKDSRAAGGIVIGTEAKLGRWEKDKNGEETNKEDLGGGIVIGRKAS ATTLTNVVIGDEARSAKDYSVVLGSYAKVENRNATAVGNAADVTVDGGIALGGSSSSTTK GGKMGYDPMTGKTRENLGEEADKLYDNWVKAYKEWEADQENINKKKATDEAAKAYHKVSS VWESSTGALSVGDSGYTRQITNVAAGTEDTDAVNVAQLKALKEHTEENTKKMTKKLHHLG EEIDGVRSESKKIGALGAAMAALNPMEYNPMKPNQILAGVGSYKNSQAVAVGMSHHFNEN LRVQAGVSVSEGRKTESMVNLGLAWKIGKDDRDDSYNKYKEGPISSIYVMQDEMKQVMEE NKNLKSEVEEMKKQLQTLIKQK >gi|224531372|gb|GG658180.1| GENE 63 63187 - 64839 1988 550 aa, chain + ## HITS:1 COG:no KEGG:FN1654 NR:ns ## KEGG: FN1654 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 5 542 30 566 571 539 51.0 1e-151 MQEIKGLPNGISNFKVLREKNYYYIDKTSFIEELQQEIGKTILFTRPRRFGKTLNMSMLQ YFWDIQHAEENRTLFQGLYIESSPYFSEQGKYPVIFLSLKDLKERTWEGCQKAMKKLLSD LYDKHQFLREFLNPRDLKYFDHIWMEEKEANYSGVLKDLAKYLFQYYQKKVIILIDEYDT PMVSSYEHGYYEEAIAFFRNFYSAALKDNEYLQTGLMTGILRVAKEGIFSGLNNLVVYSI LDEKYSSYFGLTEEEVEEALQYYEMEYKLQDVKEWYDGYRFGNTEIYNPWSILNYISNKK LDAYWIHTSNNFLVYDLLEKANINIFDDLQKVFQGKEIQKTIEYSFPFQDMTNPQEIWQL LVHSGYLKTEKSLDNHRYALKIPNQEIQSFFEKSFLNRFLGGVDMFGEMITALKKGKIEI FEKKLQDILLTKVSYHDVGQEEKYYHNLVLGMILSMSKEYEIHSNLESGYGRYDISLEPK DKTKLGFILELKIAKSEEELEKKAKEALQQIEEKKYDIEMRERGIQEIIPLGISFYGKKI QVLKSMKKAV >gi|224531372|gb|GG658180.1| GENE 64 64861 - 65499 518 212 aa, chain - ## HITS:1 COG:FN1075 KEGG:ns NR:ns ## COG: FN1075 COG0596 # Protein_GI_number: 19704410 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Fusobacterium nucleatum # 1 211 1 214 215 226 54.0 2e-59 MNYRIILIHDFGKSYRDMEKLEEHLFSMGYVVENLNFPLTFADLQSSKDILLQRIHNLKE SGLTERDEIVLIGFGFGGILIRECLHNKEFLQNVDTLLFISSPWNNSTLHRRIKRVFPFI NLFLKPLRAFSKEPIQLPRKLKVGLIIGTEYYNLFGHFLGEYNDGYVTKKDCFIPGAQDV IYLPICHREIHKKIGTAKYISNFISKGKFRVN >gi|224531372|gb|GG658180.1| GENE 65 65496 - 67097 1094 533 aa, chain - ## HITS:1 COG:FN0682 KEGG:ns NR:ns ## COG: FN0682 COG1293 # Protein_GI_number: 19704017 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Fusobacterium nucleatum # 1 533 1 538 541 355 41.0 1e-97 MLYLDGISLSFLQKDIEEKLNKRKINRIFQNTDTSLSLHFGKQVLVLSCNPQLPICYVTE DKETVLEESVSSFLNTLRKHLMNSFLYQVEQVGWDRTLIFCFSKLTELGDYKQYFLIFEL MGRNSNLFLCNQDYKILDLLKRFSLDEVQTRNLFPGAHYETLPSTKISPNEITGTTEKPY FQTVEGVGKLLSESLQNPEDLNLLVTGAPKIQLYRKNGNIVLLNFLGLVPKDYDEVLSFS DLQEAILFYFQEEKIFGTLVKLRKQLEAQLNKRKKKIEQILKKIALDEKSNEHFESWKEK GDILASCLFQLKKGQGSCEAFDFYHNEMITIPLDTRKTPKENLENYYKKYNKAKTTLVYA QKRKKEMEEELSYLESLFVFLASASEIEVLKGIEEECIQAGYSKVKPKKAYKKKKKIEKK YAVLEYPNYSLFYGRNHTENDFVSFQIADKEEYWFHAKNIPGSHVILRSFIPIEEEMIQK ACQVAAFYSQANLGDKVLVDYTQKKYLKKPKDSKPGFVTYTHEKGIWVVKEKL >gi|224531372|gb|GG658180.1| GENE 66 67114 - 67788 932 224 aa, chain - ## HITS:1 COG:FN0681 KEGG:ns NR:ns ## COG: FN0681 COG1846 # Protein_GI_number: 19704016 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Fusobacterium nucleatum # 1 224 1 225 225 294 71.0 1e-79 MTVNFIKVNDLLEEFYKLFYKTEDMALKRGIKCLTHTELHIIESVGHESLTMNELAERLG ITMGTATVAASKLSEKGFLNRERSQNDRRKVFVSLTDKGIKALAYHNSYHKMIMSSITEN IKGKDLDHFITVFEDILEALRNKTDYFKPLPICDFEHGTKVSVVEIKGTPIVQNYFASEG IENFTVVITKKSSDKGTIILKKQDGTELKLDILDAKNLIGIKAD >gi|224531372|gb|GG658180.1| GENE 67 67801 - 68439 1064 212 aa, chain - ## HITS:1 COG:FN0680 KEGG:ns NR:ns ## COG: FN0680 COG0036 # Protein_GI_number: 19704015 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Fusobacterium nucleatum # 3 211 5 213 215 334 82.0 7e-92 MEIKIAPSILSSDFSRLGEEIVAIDQAKADYIHIDVMDGIFVPNLTFGPPIIKSIRKYTN LIFDVHLMIDKPERYIEDYVKAGADIITVHAESTIHLHRVIQQIKAFGVKAAVSLNPSTS EEVLKYVIQDLDMVLVMSVNPGFGGQKFIPAVVDKIKAIRAMREDIEIEVDGGITDATIQ SCIEAGATTFVAGSYVFSGNYAERIANLKNKK >gi|224531372|gb|GG658180.1| GENE 68 68429 - 69235 1190 268 aa, chain - ## HITS:1 COG:FN0679 KEGG:ns NR:ns ## COG: FN0679 COG1162 # Protein_GI_number: 19704014 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Fusobacterium nucleatum # 1 265 22 285 285 304 59.0 9e-83 MRGILKKKENKHNCVVGDYVEISEENSIIEIYPRKNQLTRPVVANIDYLAIQFAAKNPIL DFFRLHMLLLHSMYEKVCPCIIINKIDLLTEIELQDLQQQFHFLKDLSIPIFFISQKEQI GIEVLKEFFQNKITAIGGPSGVGKSSLINLLQEAKELETGEISKKLQRGKHTTRDTRLLA LPQGGYIIDTPGFSSLELPLIENFEQLMKLFPEFEVGKPCKFGDCHHIHEPSCAVRKAVE DGKISQERYQFFTNIYHKLKTERWNYGN >gi|224531372|gb|GG658180.1| GENE 69 69323 - 70030 791 235 aa, chain - ## HITS:1 COG:FN0678 KEGG:ns NR:ns ## COG: FN0678 COG2815 # Protein_GI_number: 19704013 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 6 162 43 196 200 121 39.0 1e-27 MKFKKNIFLYLGLLVLLFFSYKVFTRYYFHDFLHEVPNVVGLSERQAKKILSKNDLEIKV MGDQYSELPEGQIMLQNPKEHSVVKSGRRIQVWISRGQNLLQIPSLVGTNLLTAQSLVQQ QGLIVDKITYIPKDLPYNEILATDPDLSQAIAKGSKISFLVSGSASSSDLNLKVPDIIGY PLEDAKFILESEQLLLGKIIRKASENTEPGFVIGTSIPAGRSVDLSTKIDLIVSE >gi|224531372|gb|GG658180.1| GENE 70 70181 - 70717 708 178 aa, chain + ## HITS:1 COG:FN0288 KEGG:ns NR:ns ## COG: FN0288 COG0634 # Protein_GI_number: 19703633 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Fusobacterium nucleatum # 1 176 1 175 175 217 67.0 9e-57 MNYRIETMINRERVEERIRELAKEIERDYKDRKEEVIFLGLLKGSVMFLSDLIKETNLDL KIDFMSVSSYGSGTTTSGVVKILKDTDFDMKGKNLLIVEDIIDTGLTLKYVKEFLYAKGA AEIKICTLLDKPERRKVELKGDYVGFTIPDAFVVGYGLDYDQKYRNLPYVGIVVFEEN >gi|224531372|gb|GG658180.1| GENE 71 70726 - 71541 802 271 aa, chain + ## HITS:1 COG:FN0287 KEGG:ns NR:ns ## COG: FN0287 COG0030 # Protein_GI_number: 19703632 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Fusobacterium nucleatum # 1 263 1 263 264 298 60.0 8e-81 MAFQHKKKYGQNFLTRQTEILAKIMEVSEVNSEDCILEIGPGEGALTELLLQEAKSVLNI EIDEDLKPILQKKFGNIEKYRLVMGDVLEVNFAEYMQERTKVVANIPYYITSPIIQKIIE NRSLIQAAFLMVQKEVGERICAKKGKERSALTLSVEYFAKPEYLFTIPKEYFTPIPKVDS AFIGIRMKKEEEIAKQVPETLFFKYVKAGFFNKRKNLANNFLALGFTKAEIKEKLATLGI SETERAENLSLEDWFSVIKALEGSSVGKEKL >gi|224531372|gb|GG658180.1| GENE 72 71522 - 71767 295 81 aa, chain + ## HITS:1 COG:no KEGG:FN0286 NR:ns ## KEGG: FN0286 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 81 2 80 80 100 63.0 1e-20 MEKKSYEFLLRSKVEDIDFINKIMEAYEGAGVVRTLDAKTGLVSIVLTEEFKDFVREILE DLRNRWVSFELLSEGPWSGRL >gi|224531372|gb|GG658180.1| GENE 73 71777 - 72016 414 79 aa, chain + ## HITS:1 COG:FN0285 KEGG:ns NR:ns ## COG: FN0285 COG1837 # Protein_GI_number: 19703630 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Fusobacterium nucleatum # 1 79 1 79 79 111 82.0 4e-25 MERLEYLMNYIIKELVQEKEEVRVSYEVIDSTVTFQIRVAKGEMGKIIGKNGLTANAIRG VMQAAGVKDKLNVNVEFLD >gi|224531372|gb|GG658180.1| GENE 74 72027 - 72545 756 172 aa, chain + ## HITS:1 COG:FN0284 KEGG:ns NR:ns ## COG: FN0284 COG0806 # Protein_GI_number: 19703629 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Fusobacterium nucleatum # 1 172 1 172 173 155 47.0 4e-38 MKLLTAGRILGTHHLLGAVKVVSSLEELPKLLGSKCMTKLETGENILLTPTKIEHLVGDS WVFQFEEIKNKAEALKLRNALIEVRRDLLGYTEEDIFLSDYIGLLAKEVETKEEIGRVEE IFETAAHPILVIQSEHYETMVPDTPTFVKEVNFETGEIYIELLEGMKEEKRK >gi|224531372|gb|GG658180.1| GENE 75 72547 - 73257 976 236 aa, chain + ## HITS:1 COG:FN0283 KEGG:ns NR:ns ## COG: FN0283 COG0336 # Protein_GI_number: 19703628 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Fusobacterium nucleatum # 1 236 1 236 238 329 68.0 2e-90 MKITVLTLFPDFFSAFQSESIIGRAIEMGKVEIVIRDIRDYCYDKHKQADDMPFGGGAGM VMKPEPLFRALADCSGKVIYTSPQGEKFSQKMALDLSEERELVIIAGHYEGIDERVIEEK VDMEISIGDYVLTGGELPAMVMMDSIIRLLPGVIRRESYENDSFFQGLLDYPQYTRPADY EGCKVPEVLLSGHHKKIEEWRFYQSVKRTLERRPDLLQGRVWTKQEKKILGELIKK >gi|224531372|gb|GG658180.1| GENE 76 73254 - 73820 729 188 aa, chain + ## HITS:1 COG:FN0282 KEGG:ns NR:ns ## COG: FN0282 COG4752 # Protein_GI_number: 19703627 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 188 1 187 187 307 77.0 1e-83 MRKQIYLALVHYPVYNKRRDVVCTSVTNFDIHDISRTCSTYDIKGYRLVVPVDAQKKLTE RILGYWQEGFGGNYNKDREEAFVRTRVAESIEEVIAEIEKIEGKKPKIVTTSARHFPNTV SFANLQEKLFETENQPYLLLFGTGWGLTDEVMAMSDYILEPIRANSKYNHLSVRAAVAII VDRLLGEN >gi|224531372|gb|GG658180.1| GENE 77 73820 - 78172 4551 1450 aa, chain + ## HITS:1 COG:FN0281 KEGG:ns NR:ns ## COG: FN0281 COG2176 # Protein_GI_number: 19703626 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Fusobacterium nucleatum # 1 1450 6 1454 1454 1768 61.0 0 MSSKEIRMKPGRELLQRLGIQFMQLEEIRYSERRNVLRVFCVLPTYLAISELERLHQDLQ ITFGNNVKIEFSSKLLDENIPKEELKNIVDLAIQRLRKTEPRFKSFLCNYRIFIEGNDIY LEVNTDCGIEIIEDGHGSQKLEAVLYEYGLKYYSIHIERGDFTAENLHRERERKEEIRQI EKKAIQEQNEIAAKAAAKVPTIPEKTDFPKRGNGGFSRNKTREIKGSPIPMKDFAEVMEE DTCIVEGEIFSLEDRELSTGNILKTLWITDESNSLTAKLFLKKDEVLEIAKNDYVRIEGK VQIDTYAQNEKIIMIQAINRLERKKTKKEDLAEEKMVELHTHTKMSEMVGVTEVGDIIKR AKQYGHSAVAITDYGVVHSFPGAHKAAKEAGIKAILGCEAYMIDDTLPIVHNLKEDQDLE KASFVVYDLETLGFNSHEGKIIEIGAVKIVEKRIVDRFSQLVNPGQSIPQNIVDVTNITD SMVQNEPNIEEVLPKFLDFIEGSILVAHNADFDIGYLKQQCKQQGYSDFNPSFIDTLQMA KDLYPELKQFGLGPLNKKLGLSLENHHRAVDDCQATGNMFLIFLDKYLDQGIHKLSEMQG AFPVNTKKQNTRNVMLLVKDRVGLENLNRLVSDAHLYHFGNRKPRVLKSNLEKYREGLIV GCSLTGHSINDSDLFHDYSTGNMERIPEKISFYDYIELLPRQAYTENIEYNGTGLISGNS YIEKMNQYFYDLAKEKGILVTGSSNVHYLDPEEAKIRTILLYGSGMVHGAKAYKTDNGFY FRTTGELLEEFSYLGEEAAKEILIQNTNAIAEKIEVIKPIPDGFYPPSIDNAEETVREMT YEKAYRIYGNPLPEIVEKRLERELNAIIGNGFSVLYLSAQKLVKKSLDNGYLVGSRGSVG SSLVAFMMGITEVNALYPHYICTNPDCKHVEFIEREGVGIDLPEKKCPKCGQMYKRDGYS IPFEVFMGFNGDKVPDIDLNFSGEYQSEIHRYCEELFGKENVFKAGTISTLAEKNAAGYV KKYFEDNGMSISQAEVMRLAKKCEGAKKTTGQHPGGMVVVPSDHTIFEFCPVQKPANDEN SDSITTHYDYHVMDEQLVKLDILGHDDPTTIKLLQEYTGLDIYGIPLSDPDTLKIFSSTE SLGVTPQQIGSEVATFGIPEFGTPFVRQMLLDTRPTTFAELVRISGLSHGTDVWLNNAQE FIRQKQATLSEVITVRDDIMNYLIDQGIEKGTAFKIMEFVRKGKPSKDPEGWKKYSDLMK EKHVKDWYIESCRRIKYMFPKGHAVAYVMMAIRIAYFKVHYPLAFYAAYLSRKAEDFNFE TLGTPEKARIRLEELSKEGKLDVKKKAEQALCEVMIEMEARHIELLPIDLYHSAGKKFLI QGDKIRVPLIALAGLGGAVIDNILEERQKESFISIEDFKKRTKVSQTIVEKMKDLKIIEN MNETNQISLF >gi|224531372|gb|GG658180.1| GENE 78 78182 - 79483 1318 433 aa, chain + ## HITS:1 COG:no KEGG:FN0280 NR:ns ## KEGG: FN0280 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 432 1 426 427 405 48.0 1e-111 MKKILCSFLCLLSLSLYGNAEIDKWYESYPFQNPYDATIIGSSMLMTQGVSEKVPKKNYE IVTREQGQLPENLWNHTKFRFSLMKQKKKAPLIFLLAGTGSDYNSLRMELFQRILYDAGF HVISISSQMTVNFIASASKFHVPGLLEEDSKDMYEIMKKCYQAVEKEVEVSDFLLTGYSL GATNAAFISKLDETEQFFNFQRVFMVNPAVNLYSSARQLDNYLNQVTGNSVSNLEKMLEA LLTKLKEESKNEYTGLTSESIFKSFQGNQFSDAQKAALVGLAFRMNAIDLNYVSDLLAKT GVYTKLDEHIKKFSPMLSYFVKIKFGDFGSYVDKVALPHYQKKLGEAYSKERLIAESSLH GVQDYLRKSPKIVVVTNEDELILSKEDLAFLRATMGDRIFVYPKGGHCGNMFYTPNIQVM LNFLKEGVFIHEK >gi|224531372|gb|GG658180.1| GENE 79 79473 - 80207 750 244 aa, chain + ## HITS:1 COG:FN0279 KEGG:ns NR:ns ## COG: FN0279 COG2853 # Protein_GI_number: 19703624 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Fusobacterium nucleatum # 44 237 54 259 260 231 56.0 1e-60 MRNRLFLLLFLSIFSFSLFAEETGMSAQEEKEIQEMTEYFGDYDPWEGLNRRVYYFNYGF DKYFFVPVVEGYQKITPVFVQHRVSNFFDNTKNISSLGNALAQTKGRKSMRSLGRLSINT ILGLGGLFDVASALGMPKPYEDFGLTLAHYGVPRGPYLILPILGPSYLRDAFGMLVDSQI ANGKEFSIPRTYTLPLSAIDRKSRVRFRFYGTNSPFEYEYVRFLYKKYRTVQEETHQNFN IGGI >gi|224531372|gb|GG658180.1| GENE 80 80208 - 81566 1949 452 aa, chain + ## HITS:1 COG:FN0278 KEGG:ns NR:ns ## COG: FN0278 COG0624 # Protein_GI_number: 19703623 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Fusobacterium nucleatum # 1 452 1 452 452 579 62.0 1e-165 MDLQKEVLKYKEDVVRGIQEMIQVPSVKSEALPGKPFGEGPANALHAFLAYAEKLGFHTE NFDNYAGHIDMGEGEETLGILAHVDVVPVGEGWTYPPFSGTIADGKIFGRGTLDDKGPAM MCLYCMKALQDLKIPLSRKIRMIIGADEESGSACLKHYFQDLKMPHPDYAFTPDSSFPVT FAEKGAVRVKITRKFKTLEEVVLRGGNAFNSVAEKVRANFPSALVSGLESKNRVKVEEED GISEVFVQGVAAHGAKPHLGVNAIQVLFDYLKDCGIHNEEFRELVELFKNYLKMETDGAS FGVNFSDEESGNLSLNVGMISLEDNQLEICIDMRCPVLVENQKVIDTMKPKVEAAGFEFV LYSNSKPLYFPKDSFLVKTLMDVYQEVTGDMEAKPVAIGGGTYAKQTTNAVAFGALLKSQ EDLMHQKDEYLEIDKLDTLLPIFIEAIYRLAK >gi|224531372|gb|GG658180.1| GENE 81 81586 - 82461 1025 291 aa, chain + ## HITS:1 COG:FN0277 KEGG:ns NR:ns ## COG: FN0277 COG4866 # Protein_GI_number: 19703622 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 287 1 286 290 286 52.0 2e-77 MWKKLEIESKEVIDRYTKHRFQICDFAFTNLFLWSRGEVIEYEEEEDVLCLRGHYNDQIY YFMPVPKEETEENIGAMKRRMDTILEEGASISYVPEYWVEKLQDDYVLEEIRDSFDYVYQ VEDLAFLKGRRFAKKKNHISKFKRTYPDFTFEEITTENLEAVKAFQSQWCFCRECEKEEV LRNENMGIMSLLDHFETLGLSGSVLKVNGEIVGFSLGEVLDQDYVLIHIEKAIADYVGSY QILNSLFLQQHFLEYQYVNREDDFGNEGLREAKESYHPAFLLKKYDVISKK >gi|224531372|gb|GG658180.1| GENE 82 82478 - 83680 2013 400 aa, chain + ## HITS:1 COG:TM0356 KEGG:ns NR:ns ## COG: TM0356 COG1171 # Protein_GI_number: 15643124 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Thermotoga maritima # 1 398 1 397 401 345 53.0 1e-94 MVTLEKIQEAKSCIQDSVRKTPVLNCPKLGAQTGNDVYFKLENLQQTGSFKLRGALNKIA HLSEEEKKCGVIASSAGNHAQGVALGATAKGIKSTIVMPAGAPLSKVRATREYGAEVVLH GAVYDNAYQKALEIQKETGAIFLHPFDDEEVIAGQGTIGLEILEQLPDVDAVLVPIGGGG ILAGIATAIKSVKPEVKVIGVEAAGAASMTAALAKGECCDIENCSTIADGIAVRKVGYKT LELVKKYVDEVVTVTEDEIVQGIFYLLEKSKLVAEGAGASGVAALLAGKINLKGKKVCAV ISGGNVDMNFIEKIVNKALVLNGQRHEITVYIPDKPGEMEKLTRVLHEQNANIIYISQTK YRASLAITEVKVDLVVECRDEAHQEEIHAALEKNGARIAK >gi|224531372|gb|GG658180.1| GENE 83 83701 - 85335 1730 544 aa, chain + ## HITS:1 COG:FN0276 KEGG:ns NR:ns ## COG: FN0276 COG1283 # Protein_GI_number: 19703621 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Fusobacterium nucleatum # 15 544 1 525 525 592 60.0 1e-169 MYFQVLCTVVGGLGIFLLGMDNMSSGMQKIAGPRLKKILATLTTNRILGIFTGIMITALV QSSSVSTVMTIGFVNASLLTLKQALGIILGANIGTTITGWLLAMNIGKYGLPIVGLAAIL LMFKKEDKVRVRLMTLMGFGFIFLGLQLMSDGLRPLRELPEFVELFKAFRADTYLGVIKV ALIGAAITGIVQSSAATLGITITLASQGLIDYPSAVALVLGENVGTTVTALLASIGASAN AKRAAYAHTLINIIGVVWVTAIFPYYLFGLENILDPDHHVGAAIASAHTCFNICNVILMI PFVGVLDKFLQRIVPNDNNIEEDEVKVTKLSSMGKMLPTVIIDQTKNEVLTMGKYIKHIF FRLEELYEDPDKIAVNVVEINQVEDKLDLYEKEINNINYALLNRTLDQEYIEKTRRNLLV CDEYETISDYIGRIGDSIEKLQEHNIVIEGFRVEILQSLNDKIVKFFQHIHQGYESKEMK YFSDGIDEYNEIKNFCKTKRKEHFKDSTENIIPSRLNTEFSDIINYYQRAADHIYNIIEY YMKL >gi|224531372|gb|GG658180.1| GENE 84 85479 - 85604 182 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLNLEKNFKFLFKKKVSFTMAALTIFAITGSIGYADVDAS >gi|224531372|gb|GG658180.1| GENE 85 86651 - 86875 419 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|317059022|ref|ZP_07923507.1| ## NR: gi|317059022|ref|ZP_07923507.1| predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] # 1 74 118 191 191 127 95.0 3e-28 MMTAMNNVDFQDVNAGEVAIGAGVGHFVGDQAVAVGVAYGVNDDLKVHAKWSGVAGDPHY NAIGGGVTYKFRTR >gi|224531372|gb|GG658180.1| GENE 86 86916 - 87299 503 127 aa, chain - ## HITS:1 COG:no KEGG:YE105_C1801 NR:ns ## KEGG: YE105_C1801 # Name: not_defined # Def: putative phagelysin # Organism: Y.enterocolitica_palearctica # Pathway: not_defined # 2 120 6 124 131 115 42.0 4e-25 MYLFNKRSLQNLKGVHPTLVKLMKTAILSSPFPFVITEGCRSLERQKQLLKEKKTRTLQS YHLTGHAVDIAIKVGEKITWEYRYYEAVAKHIQKIAHRQHILITWGGTWKNLVDACHFQL EEERKNP >gi|224531372|gb|GG658180.1| GENE 87 87311 - 87496 300 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257452483|ref|ZP_05617782.1| ## NR: gi|257452483|ref|ZP_05617782.1| hypothetical protein F3_05395 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_02784 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 61 1 61 61 99 100.0 1e-19 MRTKELENILIAEFGPKASTPELSKKLKISLTTIYKLIKEGKLILVEPGKVDTLSLFNCI F >gi|224531372|gb|GG658180.1| GENE 88 87502 - 87864 401 120 aa, chain - ## HITS:1 COG:no KEGG:SNSL254_A1182 NR:ns ## KEGG: SNSL254_A1182 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 19 120 20 120 130 87 46.0 1e-16 MKDIHCLEIFPYSSSKFCVLEDFEYPMKHRVIFVPKHFITDLSSIPRIFWNFYPPFGLYT LASIIHDFLYSKEGSKQVQSRKEADEIFLTIMEETGVSWYTRILFYYAVRLFGSLYFQKE >gi|224531372|gb|GG658180.1| GENE 89 88024 - 88245 333 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452485|ref|ZP_05617784.1| ## NR: gi|257452485|ref|ZP_05617784.1| hypothetical protein F3_05405 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_02794 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 73 1 73 73 110 100.0 4e-23 MKISEEDLSTEIIEQLVNMVGEFTNVNDLAETLNVSRTTISRKIEEGEIVAFHFGSRVIV VTRSLQGIIEKFL >gi|224531372|gb|GG658180.1| GENE 90 88357 - 88650 414 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452486|ref|ZP_05617785.1| ## NR: gi|257452486|ref|ZP_05617785.1| hypothetical protein F3_05410 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_02799 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 97 1 97 97 138 100.0 1e-31 MNTRETIQKRVKTLETSIKREKAILQELESDKATIQRIEDLVEKGIALASDSHYASYDEW KLHLEKQVKRGERSLENLKIRKAELEAFRFYLEKVGA >gi|224531372|gb|GG658180.1| GENE 91 88939 - 89640 1020 233 aa, chain + ## HITS:1 COG:no KEGG:FN0602 NR:ns ## KEGG: FN0602 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 225 1 224 236 251 53.0 2e-65 MLRVKSVETAFQASPNQYVQGAIDALGIFDNIIQPVFPYPFSNIALIFSFEKMDRPTVFE IRINAPDDSLISQGEFGVMPDSFGNGRKIVNLSNFLVAERGFYSVDILEKVSEDKVNFLK TEELFMADYPPKRRFTQEEIQEILATDGVIKMVKTDYKPVKYIQDETLEPIHFQLFLDPS EEVEEGFVAFPENDKIEIRGEIFDLTGIRRQIEWMFGQEMPKEEETKEEATEK >gi|224531372|gb|GG658180.1| GENE 92 89840 - 90352 339 170 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio campbellii AND4] # 9 170 1 166 166 135 42 3e-30 MNISEKIRINDKIRGKEFRIIGADGEQLGVMSAAEALEIAANQDLDLVEIAATAKPPVCK IMNFGKYRYEQERKAKEAKKNQKQTVVKEVKVTARIDAHDLDTKVNQIQKFLEKDNKVKV TLVLFGREKMHASLGVGTLDEVAEKFAETADVDKKYAEKQKHIILTPKKK >gi|224531372|gb|GG658180.1| GENE 93 90398 - 90604 324 68 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|19703669|ref|NP_603231.1| 50S ribosomal protein L35P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] # 1 68 1 68 68 129 89 2e-28 MPKMKTHRGAKKRIKVTGTGKFIVKHSGKSHILTKKDRKRKNSLKKDLVVSETLKRHMQG LLPYGVGR >gi|224531372|gb|GG658180.1| GENE 94 90622 - 90972 510 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739652|ref|ZP_04570133.1| LSU ribosomal protein L20P [Fusobacterium sp. 2_1_31] # 1 115 1 115 116 201 86 4e-50 MRVKTGIVRRRRHKKILKAAKGFRGASGDALKQAKQATMKAMAYSTRDRKVNKRRMRQLW ITRINSAARLNGLTYSVFMNGLKKAGIELDRKVLADLALNNAAEFAKLAETAKAAR >gi|224531372|gb|GG658180.1| GENE 95 91064 - 92230 1336 388 aa, chain - ## HITS:1 COG:FN1537 KEGG:ns NR:ns ## COG: FN1537 COG0003 # Protein_GI_number: 19704869 # Func_class: P Inorganic ion transport and metabolism # Function: Oxyanion-translocating ATPase # Organism: Fusobacterium nucleatum # 1 388 1 388 388 504 65.0 1e-142 MRIIIYTGKGGVGKTSIAAATASHLSNLGKKVLLLSTDQAHSLQDSLDHPLTYYPQEVFP NLEAMEIDSTEESKKAWGNLRDYLRQIISEKANGGLEAEEALLFPGLDEVFALLQILEIY QENRYDVLIVDCAPTGQSLSMLSYSEKLAMLADTILPMVKNVNSILGSFISKKTSVPKPR DAVFEEFESLVKRLNHLQEILHDKKTSSIRIVTTPEHIVLEEARRNYTWLQLYHFTVDAI YVNKIYPEKALEGYFENWKENQNKSLQIVEESFFNQRIFSLELQEEEIRGKDSLERISQL LYQGEDPSQIFYEGEEFKIEEKNGTRIFILPLPFTTKQDISVIKEEQDLLVTVLNETRRF RLPDKLQKRYISNYVLEDGKLKISMDYE >gi|224531372|gb|GG658180.1| GENE 96 92227 - 93414 959 395 aa, chain - ## HITS:1 COG:FN1538 KEGG:ns NR:ns ## COG: FN1538 COG0003 # Protein_GI_number: 19704870 # Func_class: P Inorganic ion transport and metabolism # Function: Oxyanion-translocating ATPase # Organism: Fusobacterium nucleatum # 1 395 1 395 396 506 66.0 1e-143 MARIIIFTGKGGVGKSSVATAHALASSREGKKSLIISADMAHNLGDIFQKKIGKTITNIS TNLDAIELDPDAIRKEIFPEVKNAMIDLMGKNGLGVSNINEQFSFPGLGNLFCLLKIREL YESNQYERIFIDCAPTGETLALLKLPELLAWYMEKFFPVGKMMVRVLSPISKVKYGVTLP KRSTMNNIEKMHQSLLELQSLLKNKEICSVRLVCIPEKMVVEETKRNFMYLHLYQYQVDA VFINRVLQENIQNPFMKKWQSIQEKYIQELEEVFRNIPLTKIPWYPKEILGYEAVEKLCD TLSTSADLFSVHKQIENETYSPCEGGYRLNIVIPNAKKENIQVFLHEMDLNLKINNVNRC IPLPNSLRGSKIVKMDLEKDNLWIQFQQNTKEAKE >gi|224531372|gb|GG658180.1| GENE 97 93690 - 94241 857 183 aa, chain + ## HITS:1 COG:FN1539 KEGG:ns NR:ns ## COG: FN1539 COG1556 # Protein_GI_number: 19704871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 182 1 182 183 292 80.0 2e-79 MSTITDELYESFKKNLESVNGSCMRTAKAGLGKLIADVFTTQEISSISVFESPMMKEAGV VATLREAGITVHTDHIRLHAETDKGGLSEAQHGIAELGTIVQEQDDADGRMVSTMSEFYI GLVKGSTIVATYDDMFDILSAMPEIPNFVGFVTGPSRTADIECVGTVGVHGPIQVCIIIV DDA >gi|224531372|gb|GG658180.1| GENE 98 94312 - 96468 2559 718 aa, chain + ## HITS:1 COG:FN1540_1 KEGG:ns NR:ns ## COG: FN1540_1 COG1139 # Protein_GI_number: 19704872 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Fusobacterium nucleatum # 1 463 1 463 463 890 92.0 0 MASEDLKKEIRSALDNATLGRTLGNFCKTYPARREKSYDGVDFEATRQKIAEVKSYAADH IDEIIEEFTTNCEKRGGHVYHATSTEDAMEWIRQLVKEKGVKTIVKSKSMASEEIHMNHV LGDDGVLVQETDLGEFIIALEGNTPVHMVMPALHLNKEQVADLFGDYTKKKHEPIISEEV KTARRVMRDKFTHADMGVSGANVAVAETGTVFTMTNEGNGRMVGTLPEIHLYIFGIEKFV KSFSDARHIFKALPRNGTAQRITSYISMYTGACEVTSNKETDEKRKKDFYCVILDDPGRR AILAEPDFREMFDCIRCGACLDVCPAFALVGGHVYGSKVYTGGIGTMLTHFLVSEERAAE IQNICLQCGRCNEVCGGGLHIAEMIMKLREKKMAENPDALKKFALDAVSDRKLFHSMLRI ASVAQGIFTKGEPMIRHLPMFLSGMTKGRSFPAIAQVPLRDMFHTIEQNVKEPKGTVAIF AGCLLDFIYTDLAKAVVANMNSIGYKVEMPLGQACCGCPASNMGDTENARKEAEINIEGM QAEKYDYIVTACPSCTHQLHLYPTFFEEGTEMYKRAKELADKTFDFCKLFYDLGGVADIG DGKPVKVTYHDSCHLKRSLRVSEEQRELLKHTKGVEFVEMHDCDNCCGFGGSYSLLYPEI SAPILENKIQNIKDSGAEVVALDCPGCLMQIKGGLDARGVDVKVKHTAEILAEKRGLV >gi|224531372|gb|GG658180.1| GENE 99 96469 - 97419 1383 316 aa, chain + ## HITS:1 COG:FN1541 KEGG:ns NR:ns ## COG: FN1541 COG0142 # Protein_GI_number: 19704873 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Fusobacterium nucleatum # 2 315 10 323 326 413 65.0 1e-115 MIEQVKQYMHLIADYSKKETEVGAVLEDALNASGKMFRTKLLLFCASLGPCYEEKKEKLC KLAAMVELTHLASLIHDDIVDDSPYRRGKISIQGKYGKDAAVYAGDFLMARIYYYEAVER LNESAALLSKTVEHMCTGEIGQDLCRYREDVSVEEYFQNIQGKTAALFETACHIGAMEAG CSQEMIEKLKLFGRNLGMMFQLKDDILDFTSNIDEIGKETHKDFQNGIYTFPVIMALQQE QAKKILYPIMEKNKGHRLDDAEITKMESCVLEYRGVEATYQEIQSLSKKNKQILQEIKGN QEAILPLWKLMDELEA >gi|224531372|gb|GG658180.1| GENE 100 97449 - 98348 587 299 aa, chain + ## HITS:1 COG:FN1542 KEGG:ns NR:ns ## COG: FN1542 COG1575 # Protein_GI_number: 19704874 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Fusobacterium nucleatum # 1 297 10 306 306 299 55.0 4e-81 MALQLAAPHTWVASIGPALFAILFCRLEGYFLQIWQEMFLLVSCIFLQSSVNTFNDYIDF IKGTDGIEDCLEEKDAVLLHHHLSPRQVISLGICYLFFGVILGVLASLPAGYLPLGIGCI GIFVILCYSGGPFPISYLPLGEIVSGFVMGALIPLGIVACSDGGLQFQVILYALPFVIGI AFIMLTNNSCDIEKDKLAKRCTLAVLLGRKRSKKIYQGLLVLWVISIVFLSARSLEFFSC ISIFFLVLARHKIGYLWKSSLLAQDRIEQMKTIVLANIIINGGYLLAMASYILVELILA >gi|224531372|gb|GG658180.1| GENE 101 98345 - 99046 274 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 13 232 1 221 221 110 33 1e-22 MKEEKKSEKVHGVFETISKEYDKANDRISLGFQRKWKGMLVQKLLEETEKQGRVLDVCCG TGDISIWIAEKRKDLKIVGLDFSSSMLREAEKKSKGLSNILWKEGDAMALPFEEHSFSAA CISFGLRNTADYETVLREMKRVLKEDGILYCLDSFVPDNRWIRPCYQMYFKYMMPFLGGG KKHYQEYFWLYESTQQFLRKQELLLLYQKLGLRELKVYSKMYGACVLIQGKKE >gi|224531372|gb|GG658180.1| GENE 102 99064 - 100359 2238 431 aa, chain + ## HITS:1 COG:FN1544 KEGG:ns NR:ns ## COG: FN1544 COG0644 # Protein_GI_number: 19704876 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Fusobacterium nucleatum # 1 431 1 431 431 759 93.0 0 MSEEKFDAIIVGGGLAGCSAAIVLANAGLAVLVVERGDFCGAKNMTGGRLYGHSLEKIIP NFAEEAPIERKITREKISLMSEDGSFDIGFGSKKLSSTNENASYTVLRSVFDQWLASKAE EAGAEIIPGILVDELIMEDGKVVGVSATGEELYADVVILADGVNSLLAQSIGMKKELEPH QVAVGAKEVIRLGEDVINQRFAVNGEEGVAWLSCGDPTLGGFGGGLLYTNKDTVSVGVVA TLSDIGHHELSINQLLDRFKEHPSIAPYLEGGTSIEYSGHLVPEEGLHMVPELYRDGVLV TGDAAGFCINLGFTVRGMDFAIESGRLAAETVIKAHQLGDFSAETLSDYKKALDNSFIME DLKQYKGFPTLLGRREIFEDLPAMVNDIAAKAFTVDGKQGQSLMMYVLNSVAKHTTAAKL VNFVTTVLEAF >gi|224531372|gb|GG658180.1| GENE 103 100362 - 100646 359 94 aa, chain + ## HITS:1 COG:FN1545 KEGG:ns NR:ns ## COG: FN1545 COG2440 # Protein_GI_number: 19704877 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Fusobacterium nucleatum # 1 94 1 94 94 181 94.0 3e-46 MKKMKIEDKLALNIFHVDEENSHIDVDKNFTDEAEIKKLLLACPAECYKYIDGKLSFSHL GCLECGTCRVLSHGKIVKEWKHPIGEVGVTFRQG >gi|224531372|gb|GG658180.1| GENE 104 100794 - 101471 1028 225 aa, chain + ## HITS:1 COG:CAC2546 KEGG:ns NR:ns ## COG: CAC2546 COG2186 # Protein_GI_number: 15895808 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 4 222 9 227 231 118 34.0 7e-27 MLEKSYEKVIEYVRIHILRGDYKIGHKLPSERELASLLGMSRNSIREGLRILERMGVLSS QQGAGNYIVGKFDEVLTDVLSMMYALREVEISQITDFRHGLEYAALNLALENATQEEKEK MKYHLEKLEVAEDDEEWLQHDKSIHYLLIESSKNKYLLVNYIALTAIMDLYIPTMRGKIL RAMKTQHYLYDAHRKIVEGILENNLVKGMEGLSLHFKYLKDYRYS >gi|224531372|gb|GG658180.1| GENE 105 101634 - 103061 2258 475 aa, chain + ## HITS:1 COG:FN1536 KEGG:ns NR:ns ## COG: FN1536 COG0277 # Protein_GI_number: 19704868 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Fusobacterium nucleatum # 1 474 1 474 475 835 87.0 0 MGGYVYNQVSPELVEKFKQIVPGKVYVGEEINQDYFHDEMPIYGEGQPEVLIDATTTEDI AAIVKLCYENNIPVIPRGAGTGLTGASVAIKGGVMINMTKMNKILEYDYENFVVRVEPGV LLIELAEDAQRQGLLYPPDPGEKYATLGGNVATNAGGMRAVKYGSTRDYVRAMTVVLPTG EIVKLGATVSKTSTGYSLLNLMIGSEGTLGIITELTLKLIPAPKETISLIIPYEKLEECI ATVPKFFMNHLQPQALEFMEREIVLSSERYIGKSVFPKELEGTEIGAYLLVTFDGDNMEE LEEITEKAAEVVLEAGALDVLVADTPAKKKDAWAARSSFLEAIEAETKLLDECDVVVPVN KIAPYLNYVNGVGEKFDFTVKSFGHAGDGNLHIYACSNDMEDAEFKRQVAEFMTDIYQKA AEMGGQISGEHGIGYGKMDYLSEFAGTVNMRLMKGIKEVFDPKMILNPNKICYKM >gi|224531372|gb|GG658180.1| GENE 106 103202 - 104338 1654 378 aa, chain + ## HITS:1 COG:FN1535 KEGG:ns NR:ns ## COG: FN1535 COG1960 # Protein_GI_number: 19704867 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 378 1 378 378 677 89.0 0 MAYLISEEAQDLLADVKKFCENEVKEQCKEYDVTGEWPKEIYDKAIEQGYHALEVPEEFG GPGLSRVDVAALLEEMAIADAGFATTISASGLGMKPVLISGSQEQKQRVADLILEGGFGA FCLTEPGAGSDASAGKTTAVKDGDSYILNGRKCFITNGAVASFYCITAMTDKTKGVKGIS MFLVEAGTPGLSTGNHENKMGIRTSNTCDVVLEDCRIPASALVGKEGEGFAIAMKTLDQA RTWMGCIATGIAQRGINEAIAYGKERIQFGKPVIKNQALQFKIADMEIKTETARQMVAHA LTKMDLGLPFAKESAIAKCYAGDIAMEVASEAIQVFGGYGYSREYPVEKLIRDAKIFQIF EGTNEIQRIVIANNVIGR >gi|224531372|gb|GG658180.1| GENE 107 104356 - 105132 1136 258 aa, chain + ## HITS:1 COG:FN1534 KEGG:ns NR:ns ## COG: FN1534 COG2086 # Protein_GI_number: 19704866 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Fusobacterium nucleatum # 1 258 1 259 259 337 72.0 2e-92 MEILVCIKQVADDSVEIAMNPTTGKPALEGVAEVVNAFDTYALEMATRLKEAKGGNICVL SLGGATTTNSLKNCLAVGADEAFHIKDETYQEKDTIAVAQILAKGIQEVEAQRGKKFDLV FCGKESTDFASGQVGIMLADELHYGVVTNLVDIDGDETKVSTKRETEEGYQEIEVACPAV LTVTKPNYEPRYPTIKSKMAARKKAIAEVVVDTTAECVITEVKMSAPAKRQAGVKLVTGT PEELVAQAMEKMLEAKVF >gi|224531372|gb|GG658180.1| GENE 108 105146 - 106120 1556 324 aa, chain + ## HITS:1 COG:FN1533 KEGG:ns NR:ns ## COG: FN1533 COG2025 # Protein_GI_number: 19704865 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Fusobacterium nucleatum # 7 323 3 323 323 402 67.0 1e-112 MSIEKQKNIMVYVETVEGSPINVSLEALTQARKLATGDQVVAVLVGEKLDEAAKKCVEFG ADEVLCIEDTRKEVEAVGDILAQCNAKYEPKVILIGSSLDGKDIAAMVASRAKLPSLTDV IAMREENGTCYMTIPMYSGNILKEVSVAAGKTVIVVLRSGACKKEAAAGAGNIQKEEVAL NELLTKVTNVVTEISESVNLEEAEVIVSGGRGMGSKENFELVKQLAEVCGGVVGATRPVT EENWVPRSHQIGQSGKIVAPKLYIACGISGATQHISGAIGSNYIVAINKDEDASIFDVSD VGIVGNVMDILPLMIEEIKKVKSK >gi|224531372|gb|GG658180.1| GENE 109 106184 - 106564 491 126 aa, chain + ## HITS:1 COG:FN1532 KEGG:ns NR:ns ## COG: FN1532 COG1380 # Protein_GI_number: 19704864 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Fusobacterium nucleatum # 1 121 1 121 127 131 65.0 3e-31 MGQCLLILAISLLGQFLSDLISFPIPKTIIASLILFVLLELKVVKVDYLRGILDICRKNL AFFFMPVGVAIMTKLGERPSMDYLKVLIVMIISTCVIMIVTGKATDIIIGIQEKIFKRND KGGDNK >gi|224531372|gb|GG658180.1| GENE 110 106561 - 107283 957 240 aa, chain + ## HITS:1 COG:FN1531 KEGG:ns NR:ns ## COG: FN1531 COG1346 # Protein_GI_number: 19704863 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Fusobacterium nucleatum # 9 237 13 241 244 294 72.0 1e-79 MSGFLENPLVHNVLFSPFFGMVLSLVAYMIGAYFFKKTKSIFCNPLLIGILLAILFMLAT DIPFEAYNQGGSILKMLISPVESVIIGVALYEQLEILKKNWFPILLSSFIGSTFAIIVVY VLGKLIVLPQDLLYATFPKSVTTAIALDIGSKFGWDGSLITMMTVSTGIIGAVVAPWITK FIKSPVARGLAIGTSSHAVGTSKAIEMGEIEGAMSGLGLSLAAIVTSFMVPVILTILHVI >gi|224531372|gb|GG658180.1| GENE 111 107439 - 108827 1719 462 aa, chain + ## HITS:1 COG:FN1422 KEGG:ns NR:ns ## COG: FN1422 COG1757 # Protein_GI_number: 19704754 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 11 460 1 450 473 388 46.0 1e-107 MKRKPTLVEALLPIVFLIVIIAVGILKYGADPQIPLLMATIVAAALGKYLGYTWSEMEKG IVETILPATQAILIQMIIGVIIGTWIVAGIVPTMIYYGLQIISPGFFLLATTVLCSIVSL ATGSSWTTAGTVGIALLGVGEVLGIPTALTAGAIISGAYFGDKLSPLSDTTNLAAAVSGT TLFEHIRNMMKTTIPAYCIALALYTGIGLRYLGRELNTEEIYKLLHILEQEFVINPVLLL PPILVILMVALKTPAVPGLTLGGVLGAIFAFVIQHKDFGAILEASQYGYKATTGYELADN LLSRGGLQSMMFTVSLIIVAMAFGGVVEKIKVLETVEERLVTFTKTTGSLVLTTVLSCIF CNATLPEQYLSILIPGRMFKDRYRKKGLDPRVLSRILEDSGTMTSALIPWNTCGAFMYAT LGVYPFAYLPFAFFNLLSPLIAILSGFFGVGIIKLEEEERLD >gi|224531372|gb|GG658180.1| GENE 112 108866 - 109312 555 148 aa, chain - ## HITS:1 COG:FN0349 KEGG:ns NR:ns ## COG: FN0349 COG1490 # Protein_GI_number: 19703692 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Fusobacterium nucleatum # 1 147 4 150 154 197 67.0 6e-51 MKAVIQRVQYASVAVEGNIIGKIEKGFLILLGITHEDTEKDVLWLANKIKDLRVFEDENG KMNLSLEEVKGEVLIVSQFTLYGNCMKGRRPAFVDAARPELAIPLYEKFLETFQSFGIKT ESGKFGADMKVELLNDGPVTLIIESKDK >gi|224531372|gb|GG658180.1| GENE 113 109465 - 110973 2184 502 aa, chain + ## HITS:1 COG:FN0348 KEGG:ns NR:ns ## COG: FN0348 COG1488 # Protein_GI_number: 19703691 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Fusobacterium nucleatum # 7 499 7 499 501 742 75.0 0 MKRLNTLTEFARVINSDRYQYTESDIFLMEKMQDKVATFDVFFRKTEDGGFAVVAGVQEV LDLIHILNETSEEEKRMYFSTILEEQHLIEFLSKIRFTGDIYALPDGAIAYPNEPILTIK APLIEAQILETPILNIINMAMAIATKASMVTRAAYPQVVSSFGSRRAHGFDSAVSGNKAA VIGGCSGHSNLMTEYRYGIPSSGTMAHSYIQSFGVGKKAEKEAFTKFIEHRKNRKGNTLL LLIDTYNTIKIGLENAIEAFQEAGIDDNYPGVYGVRIDSGDLAYLSKKCRQRLDEVGMKK AKIFLTNSLDEKLIKSLKEQGACVDIYGVGDAIAVSKSYPCFGGVYKIVELDGKPLIKLS EDVIKISNPGFKEVYRIFDKEGKAYADLVTLVEGDRDKEILLSGKDLILRDEKYDFKKSY LKAGEYTFEKLTKVYVKQGEIQEALYEELLDTMKSQKHYFESLEKVSDERKRLENPHQYK VDLSQDLLQLKYGLIKSIKEEA >gi|224531372|gb|GG658180.1| GENE 114 110982 - 111896 680 304 aa, chain + ## HITS:1 COG:FN0347 KEGG:ns NR:ns ## COG: FN0347 COG0688 # Protein_GI_number: 19703690 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Fusobacterium nucleatum # 1 299 1 299 300 374 65.0 1e-103 MKFEAIRYIERKTGEYKIEKVPGESFLKFLYYNPFGKLALEALVKRKFLSVWYGKKMDTP ESKKKILPFVKALEIPMEEAEKSWEDFTSFNDFFYRKLKKGARTWDMREEVLVSPADGKI LAYENIESFSSFFVKGQEFSLEELFASKEMAEKYAGGSFVIVRLAPVDYHRFHFPIDAWV GTSHKIDGYYYSVSTHAIRRNIRIFLENQREYTILESKLFGDIAYFEVGATMVGGIHQTY LENTMVNKGEEKGYFDFGGSTCLLLFEKGKVQLDEDLLENTKKGLETKVYVGEKIGYAKK DGVL >gi|224531372|gb|GG658180.1| GENE 115 111871 - 112272 396 133 aa, chain + ## HITS:1 COG:FN0346 KEGG:ns NR:ns ## COG: FN0346 COG5341 # Protein_GI_number: 19703689 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 3 133 2 130 130 139 57.0 2e-33 MQRRTEYFKRGDIVIYLLLVFLFFQLALNILQFPEVKAEKAEIYVDGRLEYVYPLQEEQK LFFVDTPIGGVNVEIKDKKIRVTTSNSPLKLCVKQGWIDGVGESIIGVPDRLLIQIVGEI SEDDEDYVDGVVR >gi|224531372|gb|GG658180.1| GENE 116 112277 - 113398 1263 373 aa, chain + ## HITS:1 COG:FN0345 KEGG:ns NR:ns ## COG: FN0345 COG0628 # Protein_GI_number: 19703688 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Fusobacterium nucleatum # 39 351 7 319 331 201 39.0 2e-51 MKKEKYSGIAFILFAVVILQSYLQETETFASILGSSISFFIPLIWAMFLSILLYPLQKFL EEKLHLKRELALIVVLILLGLCVSLFMLTVIPQVSKSIKELQQIYPYMEKRVGEFLDKIL SLLHKQGLLLMNETEIMKAISEYTQDNIQKIQQIGISIFWNVFDVTFGLANFFIGLFLAC FILLKPEDFVKVIERVIYLNVKKEKALNIIEILRKSKDIFLNYVVGRLLVSIIVALIVFL ILFLTKTPYPVLTALLFGVGNMIPYLGVLVASLVSGFLILIFAPYKIGYLIFAIVLSQAL DGFIIGPKIVGDKVGLNSFWVVVAILLCGKLMGIAGMFLGVPIFCIIKLIYQEKWRAYVE KEKEGIEENEPKI >gi|224531372|gb|GG658180.1| GENE 117 113382 - 114533 1331 383 aa, chain + ## HITS:1 COG:FN0344 KEGG:ns NR:ns ## COG: FN0344 COG0116 # Protein_GI_number: 19703687 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Fusobacterium nucleatum # 8 382 4 376 379 521 70.0 1e-148 MNQKFSMVASSTMGLESIVKEECKKLGFQNIQTFNGRVEFDGDFKTLAKANIHLRCADRV FIKMSEFKALSYEELFQEIKKIAWEHWIEEDGEFPISWVSSVKSKLYSKADIQRIVKKAM VERLKEKYKKEIFEETGAKYRIKIQCHNDIFLVMMDTSGEGLNRRGYRSLKNEAPLKETM AAALIYLAKWQGGERAFLDPMCGTGTLAIEAAMIARSIAPGANRNFAAEEWSIIPEDIWI NARDEAFSMEDYEKRVKIYASDIDEETIKIAKKNIERAGVEGDIILSCQDFREVKVEEKA GAMITNPPYGERLLDLVEVEELYRNLGQFCRKHLSKWSYYIITSFESFEKVFGKKASKNR KLYNGGIKCYYYQYYGEDRVNGR >gi|224531372|gb|GG658180.1| GENE 118 114523 - 115185 754 220 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_1994 NR:ns ## KEGG: Ilyop_1994 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 4 216 2 214 214 87 31.0 3e-16 MEDKYKNIWEEAEETFLEVLKIATQKQKELHNIGDLAGEELLEKEVISKYEALYLALQEE NFEDFSEIQWKQFQETLTEIQKKHQMDSTVLKEKRYLRKKLEGKSGAEVVKRLLEYQQKE LEKQKKNIMEEANQILEEEEKIHRKLCEAIQEVEQLQLFEQLQPLQKRYAIISEKALDIQ KKIDYTVRDIEKKWKFKIYGTISEQKLQETSEEFFKKQKN >gi|224531372|gb|GG658180.1| GENE 119 115207 - 116514 2074 435 aa, chain + ## HITS:1 COG:FN0341 KEGG:ns NR:ns ## COG: FN0341 COG2056 # Protein_GI_number: 19703684 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Fusobacterium nucleatum # 1 433 1 442 442 476 68.0 1e-134 MLLFNPVVLSVIVMSALCLLKLNVLISILIAALVAGGVAGMGLSGTISTLIGGMGGNAET ALSYILLGTLAVAINHTGVASILSRKIASLVNGKKYVLLCFIAFIACFSQNLIPVHIAFI PILIPPLLKLMNQLKVDRRAMACSLAFGLKTPYITLPVGFGLIFHGILAKEMANNGMEVA KTAIYKPLWILGVAMLIGVLLAIFVTYRKPREYQDLPLKGMEEVISEKMELKHWLTLVAA ILAFVVQILTGSLPLGALAALIALFVFGCIKWNEIDTMLNGGIQIMGLIAIIMLVAAGYG TVIRETGAVAELINALVGMVGGSKAIGAFAMLIVGLLITMGIGTSFGTIPVVATIYVPMC IHLGFSVESTVILMAAAAALGDAGSPASDTTLGPTSGLNADGQHEHIWDTCVPTFLHFNV ALIIGAMIGSIMIYG >gi|224531372|gb|GG658180.1| GENE 120 116562 - 117458 1409 298 aa, chain + ## HITS:1 COG:FN0741 KEGG:ns NR:ns ## COG: FN0741 COG3643 # Protein_GI_number: 19704076 # Func_class: E Amino acid transport and metabolism # Function: Glutamate formiminotransferase # Organism: Fusobacterium nucleatum # 1 293 1 300 321 448 73.0 1e-126 MAKIVECVPNYSEGRDLAKIEKIVAPFKEDTRIELLGVEPDGDYNRTVVTVMGEPEIIAE AVIRSIGIAAEVIDMNVHKGEHKRMGATDVVPFIPIKDMSIEECNELSKKVGKEVWERYQ VPIFLYENTASAPNRVSLPDIRKGEYEGMKEKMLLPEWAPDFGERAPHPSAGVTAVGCRM PLIAFNINLDTADVEIAKKIAKAIRFSSGGFRHIQAGPAEIKEKGFVQVTMNIKDFKKNP IYRVFETVKMEAKRYGVNVTGSEIIGAVPMEAIVESLAYYLGVEDLGMNKILESKLIK >gi|224531372|gb|GG658180.1| GENE 121 117469 - 118695 1622 408 aa, chain + ## HITS:1 COG:FN0740 KEGG:ns NR:ns ## COG: FN0740 COG1228 # Protein_GI_number: 19704075 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Fusobacterium nucleatum # 1 408 1 413 413 577 70.0 1e-164 MKADLILYDIGQLITSRELEENHIEILENGYLAIKGDKIIGVGTGEVPTSFIQFDTKFVR IGKKVVSPGLVDSHTHLVHGGSREHEFSMKIQGVPYLEILAAGGGILSTLKATREASLED LIEKTKKSLRYMLELGVTTVEAKSGYGLSLEQEIKQLEATKLLNHLQPVSLVSTFMAAHA TPPEFKGRTADYVEEVIKMLPEIKKRNLAEFCDVFCEEGVFSVEESRKILSKAKELGFQL KIHADEVVSLGGVNLAGELQAVTAEHLMVITDEGIEALKKGNVIADLLPATSFNLRHDYA PARKILEAGVQVALSTDYNPGSCPSENLQFVMQIGAAHLKMTTEEVFKAVTINGAKAVCR EKEIGSLEVGKQADIAVFDVPNAEYMLYHFGVNHTDSVYKAGKLVYQR >gi|224531372|gb|GG658180.1| GENE 122 118705 - 119343 1165 212 aa, chain + ## HITS:1 COG:FN0739 KEGG:ns NR:ns ## COG: FN0739 COG3404 # Protein_GI_number: 19704074 # Func_class: E Amino acid transport and metabolism # Function: Methenyl tetrahydrofolate cyclohydrolase # Organism: Fusobacterium nucleatum # 1 212 1 212 212 222 55.0 4e-58 MKLMDMTLTQFLNEVDSPSPAPGGGSVGALVGGIGASLGRMVAHLSFGKKKYNAHPEEAR AAFEKNFVRLLEVKNELGRLVDADTDAYNLVMGAYKLPKDTEEQKVAREAEIQKNLKLAV QTPYETVMYCAEGIDLLGVLLQYGNQNAISDIGVGCLMLFAGLEAGIFNVLINLQSITDE AYNKEMKEKVMKIKEKAQAQKEEIVKIVEGAM >gi|224531372|gb|GG658180.1| GENE 123 119384 - 119830 450 148 aa, chain - ## HITS:1 COG:FN0338 KEGG:ns NR:ns ## COG: FN0338 COG3086 # Protein_GI_number: 19703681 # Func_class: T Signal transduction mechanisms # Function: Positive regulator of sigma E activity # Organism: Fusobacterium nucleatum # 38 137 2 101 114 134 64.0 6e-32 MENKGIVQKIDGKQITVKLFKDSSCSHCNQCHGASKYGKDFEFETDKKAKVGDLVTLEIA EKEVIKAAAIAYVFPPLMMIIGYLVTDKLGFSENQSILGSFIGLILAFIGLFIYDKFFAK KSIEEEIRVISVENYDPTKIEKNTSCEL >gi|224531372|gb|GG658180.1| GENE 124 119997 - 120821 896 274 aa, chain + ## HITS:1 COG:no KEGG:FN0760 NR:ns ## KEGG: FN0760 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 222 1 229 270 68 26.0 3e-10 MRFLKLRYLYIIALLFLVVIYLFPTTFHTQEQKEWLDIYFGNFIYLAFFVLFLYGVRMWY ETIAEKIVFEIRLYFGLFSFFASLALFFLWNGGLSFQSLEVTQATRDGILTEMIYEFHTG LIAAYAMYLLLNWNIYPFYYCMYAMLVGAILFFFLVVYKPLKKRYSHWKQVKRERIERER AERAIQEQIKIKKALEREEARKVAQFEQRKIELIQERARGFEMGQLMSSVDLDDEEEEQE EFESNSENTEVMEEEKEEQEFQVDIFAEELENKK >gi|224531372|gb|GG658180.1| GENE 125 120837 - 121883 1663 348 aa, chain + ## HITS:1 COG:FN0758 KEGG:ns NR:ns ## COG: FN0758 COG1077 # Protein_GI_number: 19704093 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Fusobacterium nucleatum # 1 348 5 353 353 503 74.0 1e-142 MLKKYLGRIFGMFSDDIGIDLGTSNTLICVKNKGIILNEPSVVAIHTKTKEIYEVGERAK MMIGRTPQAYDTIRPLKNGVIADYEITEKMLNSFYRRISNRLLYNPRVIICVPAGITQVE KRAVIDVTREAGAREAFLIEEPMAAAIGIGINVFEPEGSMIVDIGGGTAELAVISLGGVV RKSSFRVAGDKFDADIIEYIRQTHNLLIGEKTAEDIKKAIGTVVELEEDLSVDVSGRSLL NGLPKDVKVYASELIPVLNSSVQEIIEEIKIIFEKTPPELAADIRRRGIYITGGGALLRG IDQRMAENLNLKVVTVENPLNAVIDGITILLKNFSIYKSVLVSTETDY >gi|224531372|gb|GG658180.1| GENE 126 121900 - 123522 1583 540 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_0587 NR:ns ## KEGG: Ilyop_0587 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 242 532 38 328 331 79 23.0 4e-13 MKKWLAWIFYMSISCFSFADYFLSNGEVTFYFDDQEKEVSYLRGDALYPLDISRIRFYWI DEKENVYDFQASVKKVEKEGENILAVSYALDHSEWKITFIPSFQKKNQLFAFLEGNIQQK GYLVMEISPQQENRYIRTEKEEQNLEYENFMISSNRKDLSLYLSKDSSLSEFQLERVLKA SKKFREDRLYYIFNKMQEGKQQVAFTFHFYQKEKEEWKTFEELFLEEKAAALFFQQSYEK MRSSKILSKNLEYLDLLSSRVYIPNFLSYAKARMSYLEKQQLLFIRALYHMTENHQRILE DVNLRKKELDSVHYFYYALLYAEKTQQRIDQNLVNKRLLPQILSIYDEMTEDGRLIAVED SLEAYASYYRLLSLLEKRVEFSSELEFIQERKEKLYSYIHKAFLYHGAFKDRSFEESVNV KNIEYIFLLPKSIQQTTLKQWYKKNYDRKLGVIHYFGEKNVDTIHNLKMVSILYEMGMSY EADQLLENLEKYMKRSQNYVLEEYSLVDKVEKQEIEISARALYYYLLANWNREQYHGNER >gi|224531372|gb|GG658180.1| GENE 127 123506 - 124030 662 174 aa, chain + ## HITS:1 COG:FN0757 KEGG:ns NR:ns ## COG: FN0757 COG1386 # Protein_GI_number: 19704092 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Fusobacterium nucleatum # 1 174 1 174 181 208 63.0 5e-54 MGMKDELESILFLGGDENKVKDLAKFFSISLEDMLKLIEELKEDRKDTGICIEMDADLVY LVTNPKNGEIIHQYFEQEVKPRKLSAAAMETLSIIAYKQPITKREIEKIRGVGVDHIVQT LEERNLVRVCGYRDSIGRPKLYEVSNKFLGYMGISSLEELPEYRQIQEELDGRE >gi|224531372|gb|GG658180.1| GENE 128 124017 - 124733 924 238 aa, chain + ## HITS:1 COG:FN0756 KEGG:ns NR:ns ## COG: FN0756 COG1187 # Protein_GI_number: 19704091 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Fusobacterium nucleatum # 6 238 1 234 234 237 57.0 1e-62 MEENKIRINKFLASKGVASRRQIDLWIEEGKILVNGILATSGQKVSAEDKILVNGKMISE KEEKKVYYILYKEEEVLSAVKDERGRKTVVDCIPTKARIFPVGRLDYRTSGLILLTNDGE LFNRVMHPRAEIFKTYEVLAKGHLTREQLKTLEEGVELEEGKTLEALVAKVKYEKGNTFF EISIREGRNRQIRRMVEAVGSRVYQLRRTKIGRLSLEGLKLGQYRRLQEEEIEYLYSL >gi|224531372|gb|GG658180.1| GENE 129 124750 - 125043 588 97 aa, chain + ## HITS:1 COG:FN0755 KEGG:ns NR:ns ## COG: FN0755 COG0721 # Protein_GI_number: 19704090 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Fusobacterium nucleatum # 1 96 1 96 96 101 63.0 3e-22 MSLSREEVLKVAKLAKLKFSEEKIEKFQEELNDILGYVDMLNEVDTTEIEPLIYVHEAQN NFREDEARASLEVEEVLRNAPNAEDGAIIVPRVVGEE >gi|224531372|gb|GG658180.1| GENE 130 125058 - 126515 410 485 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 25 473 25 452 468 162 29 2e-38 MKKIYEMTAKELHQSFLAGEYRAVEIVEAFFQRIEAVESKINSFVSLRKEKVLEEAKQLD EKKLSGKELGSLAGVVVALKDNMLCQGEKVTAASKILENYEGIYDATVVSKLKEADALIL GFTNMDEFAMGGTTKTSYHKMTANPYDITRVPGGSSGGAASSIAAQQVPLALGSDTGGSI RQPASFCGVVGLKPSYGRVSRYGLMAFASSLDQIGPLAKNVEDIAYAMNVIAGTDDYDAT VKEVEVPDYTSFLGKEIRGMKIGVPKEYFIEGIRAEVKEIIMKSIDMLKSLGAEIIEISL PHTKYAVPTYYVLAPAEASSNLARFDGVRYGYRSENSQNIEDLYINSRTEGFGDEVKRRI MIGTYVLSAGFYDAYFKKAQKVRRLIQEDFIKAFETVDVIVTPVAPSPAFQLSEQKTPIE LYLEDIFTIPANLAGIPGLSVPAGLAGGLPVGIQFLGKAFHEGDLLQVGSAFEKARGDWK LPILD >gi|224531372|gb|GG658180.1| GENE 131 126531 - 127982 1918 483 aa, chain + ## HITS:1 COG:FN0753 KEGG:ns NR:ns ## COG: FN0753 COG0064 # Protein_GI_number: 19704088 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Fusobacterium nucleatum # 1 481 1 481 481 712 75.0 0 MAREWESVIGLEVHLQLKTGTKVWCGCKADYDGDGMNTHTCPICLGHPGTLPKLNKKVVE YAVKAALALNCNINHHSAFDRKNYFYPDAPKNYQITQFEKSYAEKGHLDFRLNSGREVRV GITKIQIEEDTAKSIHASHESFMNYNRASIPLVEIISEPDMRSSEEAYEYLNTLKSIIKY TGVSDVSMELGSLRCDANISVMEKGATKFGTRVEVKNLNSFKAVARAIDYEIGRQIETIE QGGSIDQETRLWDDEAQITRVMRSKEEAMDYRYFHEPDLLQLYIPQSRIDEIQASMPESK AEKLVRFTKDYELPEYDAQVLTEEMELADYFEKVVEVSKNPKSSSNWIMTEVLRHLKETG KEIESFEISAENLGKIICLIDTKTISSKLAKEVFALSLTDSRDPEIIVKEKGLLQVSDEG AIISMVEEVLANSTKMVEDYKNSDEGRRPRVLKGLMGQVMKLSKGKANPELVTKLMLERL EKM >gi|224531372|gb|GG658180.1| GENE 132 128176 - 129048 979 290 aa, chain + ## HITS:1 COG:FN0163 KEGG:ns NR:ns ## COG: FN0163 COG0646 # Protein_GI_number: 19703508 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I (cobalamin-dependent), methyltransferase domain # Organism: Fusobacterium nucleatum # 6 284 1 298 309 257 44.0 2e-68 MLLEALKRRILVLDGAMGTMLASYGEKPCYEVLNKTKENLIQKIHEKYIEAGADIITTNS FNCNQMALQKYHLKESVYDLTKKSVEIAKKATKNSKKAVYILGSIGPSIANLPEDMKSWK QSYFQQILGLLDGGVDALLLETIYDENKANCILGIIEEVLQAGKREIPVFCSMTINQNGK LLTGTSITRAVEKMDRPWIVGFGLNCSYGMENVVSFLPELIWATDKYCMVYANAGFPNEK GEYTENIEEMLELLQPFLEKHLIHIVGGCCGTNEKYTYAFAKKIALLAER >gi|224531372|gb|GG658180.1| GENE 133 129063 - 129776 762 237 aa, chain - ## HITS:1 COG:FN1185 KEGG:ns NR:ns ## COG: FN1185 COG0846 # Protein_GI_number: 19704520 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Fusobacterium nucleatum # 2 236 7 242 252 306 61.0 3e-83 MEEIEKLASWIQESKHLVFFGGAGTSTDSGIKDFRGKNGLYQENFHGYSPEEVLSIDFFH RHRDLFLKYVEEKLSIANIKPHAGHYALVELEKMGKLKTIITQNIDDLHQAAGSKKVLEL HGTLKDWYCLSCGKHNTHPFQCQCGGTVRPNVTLYGEMLNEKVTEEAIREIQKADVLIVA GSSLTVYPAAYYLQYYKGNKLVIINQSPTQYDKQAGLLISKNFAETMTEVLEYIKKK >gi|224531372|gb|GG658180.1| GENE 134 129906 - 131198 1700 430 aa, chain + ## HITS:1 COG:FN1147 KEGG:ns NR:ns ## COG: FN1147 COG3681 # Protein_GI_number: 19704482 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 20 426 3 409 411 582 71.0 1e-166 MNKELKDKILNILQEEIVPAEGCTEPIAIAYAAAKLAQVLGEKAENIDIYLSGNMIKNVK SVFIPSSDGMVGIEAAVAMGFIAGNADKELMVISDVTKEQLEAVKDYYAEKRIHTYAHEG DIKLYIRMEAKTKNHTASIEIKHTHTNITELKKDGKILLAQACNDGNFNSPLSDREILSV KLIYDMAKEIPLPEIEPLFFQVVAYNSAIAEEGLKGKYGVNIGKMILDNIERGIYGNDIR NKAASYASAGSDARMSGCSLPVMTTSGSGNQGMTASLPIIRYCRERNVSYEQMIRGLFMS HMITIHVKTNVGRLSAYCGAICASSGVAAALTYLEGGSYYNVCDAITNILGNLSGVICDG AKASCALKISSGVYSAFDACMLALNKDVLRPEDGIIGKDIEETIKNIGELAQAGMKETDE VILDIMVGKR >gi|224531372|gb|GG658180.1| GENE 135 131472 - 133385 2854 637 aa, chain + ## HITS:1 COG:FN1424_1 KEGG:ns NR:ns ## COG: FN1424_1 COG1960 # Protein_GI_number: 19704756 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 377 1 377 377 647 87.0 0 MFFKTTEEHEELRAKVREFVETEVKPIAFELDQENKFPEEAIKKFAKMGMMGLPYPKEFG GAGKDILSYAIAVEELSRVDGGTGVILSAHVSLGTFPIAAFGTEEQKKKYLVPLAKGEKI GAFGLTEPNAGSDAGGTETTAVLEGDHYILNGEKIFITNAPYADIYVVFAVTTPDIGTRG ISAFIVEKGWEGFTFGDHYDKLGIRSSSTAQLIFNNVKVPKENLLGKEGKGFNIAMATLD GGRIGIASQALGIAQGAYEEALNYAKEREQFGQPIAFQQAITFKLADMATKLRAARFLVY SAAELKEHHEPYGMESAMAKQYASDVALEIVNDALQIHGGAGYLKGMPVERFYRDAKICT IYEGTNEIQRVVIGAHIVGKAPKPTALAAAPKKKGPVCGIRKNVIFKDGSMQDKVNALVA ALKADGYDFTVGIDMDTPILDAERVVSFGKGVGKKENVELVKELAKQAGAALGCSRPVAE TLRYLPLNRYVGMSGQKFKGNLYIACGISGAIQHLKGIKDATTIVAINTNGNAPIFKNAD YGIVGSIEEVLPLLAAALNNGEDKKPAPPMKKMKRVIPKPVAPSYKLHVCNGCGYEYNPE FGDEDGEVKPGTLFKNLPEGWTCPECGEAVDQFIEVE >gi|224531372|gb|GG658180.1| GENE 136 133401 - 134603 1637 400 aa, chain + ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 399 1 403 405 602 70.0 1e-172 MHCVREITKDLYWVGGNDRRITMFENIHPLKDGVSYNSYLLLDKKTVLFDTVDWTIVRQF VENIEYVLDGRTLDYLVINHMEPDHAAAIEEVLLRYPKAKVISTEKGFYLMTQFGFHVDP ANQITVKEGDKQNFGKHEIVFVEAPMVHWPEAMVSFDTTNGVLFSADAFGSFKALNGAMF NDEVDFDKDWIDEARRYYTNIVGKYGPHVQHLLGKAPVDQIKFICPLHGPVWRNDFGYLI DKYVKWSTYTPEEKAVMIVYASMYGNTENAVEILASKLVQKGIKVKLYDVSNTHVSHLIS DTFKYSHVILSSVTYNLGIYPPMHNYLMDMKALNLQNRTFAILENGSWACKVGSLMREFI ENNLKKSIVLNETVTLTSSTNEVNLKEMDDLVESIVESMK >gi|224531372|gb|GG658180.1| GENE 137 134663 - 135628 831 321 aa, chain - ## HITS:1 COG:YPO2151 KEGG:ns NR:ns ## COG: YPO2151 COG0697 # Protein_GI_number: 16122384 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Yersinia pestis # 8 300 13 307 373 146 32.0 5e-35 MNNKIISIFFAFIAAMLYALNIPFSKLLLEQISPVFMASFLYFGAGIGMLCLSLLKKGNK EQNKLTKKELPYTLGMIFLDILAPISLMVGLKWISPTNASLLNNFEIVATSCIALFFFQE KISSKMWAAILLITLSSVLLSLEEQTNFSFSYGAIFILLACIFWGMENNCTRMLSSKNIV QIVVLKGICSGFGSFIVAFVIGEHLPHFFLILIILILGFLSYGLSIFFYVKAQKELGAAK TSAYYSINPFIGTFLSFLIFQEKLSKYYFLALFIMILGTILVILDTLFIKHKHIHSHQSL TEHTHEHIHFVTNLEKHIHKH >gi|224531372|gb|GG658180.1| GENE 138 135749 - 137416 2701 555 aa, chain - ## HITS:1 COG:FN0684 KEGG:ns NR:ns ## COG: FN0684 COG1151 # Protein_GI_number: 19704019 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Fusobacterium nucleatum # 6 552 4 556 566 808 69.0 0 MCHTNMFCYQCQETFKNEGCQISGVCGKKPTTASLQDLLIYIDKGVANYSQALRQAKSPL IDNTVNKYLINSLFITITNANFDDQEIFHEIQRGLQLRESLKAECERLGLHTKFENHNLA KWYFTNERDVLNFSKTVGVLRTANEDIRSLRELLTYGLKGMAAYTEHAFNLGKTDDSLFA FIEKALLATEDDSLGVNELIPLVLECGQFGVSAMALLDNANTSAFGNPEITKVNIGVGTR PGILISGHDLNDIKQLLEQSKDAGVDIYTHSEMLPAHYYPELKKYPHLFGNYGNAWWKQK EEFETFNGPIVFTTNCIVPPKKGASYEGKVFTTNAAGFPDWKKIPVREDGTKDFSEVIEM AKTCQAPKEIEHGEIIGGFAHNQVFALADKVVEAVKSGAIKKFVVMGGCDGRHKERDYYG DFAQALPKDTVILTAGCAKYRYNKMNLGDIGGIPRVLDAGQCNDSYSLAVIALKLKEVFD LDDINKLPIIYNIAWYEQKAVIVLLALLYLGVKNIHLGPTLPAFLSPNVAKVLVENFGIA GIGTVEDDMKKFFEM >gi|224531372|gb|GG658180.1| GENE 139 137562 - 138554 1446 330 aa, chain - ## HITS:1 COG:FN1900 KEGG:ns NR:ns ## COG: FN1900 COG3641 # Protein_GI_number: 19705205 # Func_class: R General function prediction only # Function: Predicted membrane protein, putative toxin regulator # Organism: Fusobacterium nucleatum # 1 330 1 330 330 308 60.0 9e-84 MKNFCIKTLNGMALGLFSSLIIGLILKQCGQFLHLPILIQFGTLAQYFMGPAIGVGVAYS LQSPPLVLITSLITGAFGAGTIQFVEGIAQIKIGEPMGAYIASLVAALLVTNLSGKTKLD IILLPACTIIVGCLVGIFISPAISLFMKYLGEIINTATALHPIMMGMTLAVSMGMILTLP ISSAAIGISLGLHGLAAGAALVGCCCQMIGFATISYRENGIGGFISQGIGTSMLQIPNII KNPWIWLPPTLASAILGPISTSIFHMESNAVGSGMGTSGLVGQVSTLAVMGTTSLLPMLL LHFLLPAILSLIFAKILMKQNKIQLGDMKL >gi|224531372|gb|GG658180.1| GENE 140 138649 - 139158 760 169 aa, chain - ## HITS:1 COG:lin2129 KEGG:ns NR:ns ## COG: lin2129 COG1827 # Protein_GI_number: 16801195 # Func_class: R General function prediction only # Function: Predicted small molecule binding protein (contains 3H domain) # Organism: Listeria innocua # 3 168 6 172 173 129 43.0 2e-30 MTGETRREKIVSLLKNQEKAISGREFAQQLEVSRQVIVQDIAILRAKNVPILSSPEGYLL EKTEKKLQFSFFSRHQSLQEMKEELEIIVDYGGKLLNIQVEHEIYGLITSNLCLQNRLDI ELFLEKLQETNSKPLSFLTNGLHSHTVEVDDLNQKKFILKKLQEKGFLQ >gi|224531372|gb|GG658180.1| GENE 141 140512 - 142134 1928 540 aa, chain + ## HITS:1 COG:FN1301 KEGG:ns NR:ns ## COG: FN1301 COG0488 # Protein_GI_number: 19704636 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Fusobacterium nucleatum # 1 539 1 539 539 965 88.0 0 MIITSGLGMRFSGRKLFEDANLKFTPGNCYGIIGANGAGKSTFVKILSGDLEATEGEVIF DKKKRMSVLKQDHFQYEEEEVLNVVLMGNKILWDIMVEKNAIYAKEEFTDEDGLRAAELE GEFAELNGWEAETEAETLLMGLGIGADLHHALMKELTEPQKVKVLLAQALFGEPDALLLD EPTNGLDIKAISWLENFIMNLEHTTVLVVSHDRHFLNKVCTHITDIDYGKIKMYVGNYDF WYESNQLMIQLISNKNKKLEQKRQELQEFIARFSANASKSKQATSRKKQLEKLQLEDMQI SNRKYPFVEFKPDRDAGNNMLKVENLSKTIDGVKILDNVSFMINTGDKVVFLAKNDIVKT TLLSILAGEMEADSGSYTWGVTTSQAYMPRDNSAFFTNSDLNLIEWLRPYSPDEHEAFVR GFLGRMLFSGEETLKKCTVLSGGEKVRCMLSRMMLSGANVLLFDNPSDHLDLESITSLNK ALIKFSGTILFGAHDHEFIQTVANRIIEITPSGIVDKLMSYDEYLEDEELQAKIEAMYAE >gi|224531372|gb|GG658180.1| GENE 142 142152 - 143438 1694 428 aa, chain + ## HITS:1 COG:FN1918 KEGG:ns NR:ns ## COG: FN1918 COG0536 # Protein_GI_number: 19705223 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Fusobacterium nucleatum # 1 428 1 428 428 614 81.0 1e-176 MFIDEVVITVKAGNGGDGSAAFRREKSVQFGGPDGGDGGNGGSIFFYADPNVNTLVDFKY KKIFKAQHGENGQKKQMFGKAGEDLIIKVPVGTQVRDLQTGKLLLDMNEKNETRMLLKGG RGGWGNVHFKTSTRKAPKIAEKGREGAELQVKLELKLIADVALVGYPSVGKSSFINRVSA ANSKVGSYHFTTLEPKLGVVRLEEGKSFVIADIPGLIEGAHEGVGLGDKFLRHIERCKMI YHLVDVAEIEGRDAISDFEKINEELSKFSEKLAKKPQVVLANKMDLLWDMEKYETFKSYV EEKGYEVYPVSVLLNEGLKEILYKTFDKIQKVEREPLEEETDIMEVLQELKIQKDDFEIT QDEEGVYHIEGRIVDGVLAKYVIGMDDESIVNFLHLMRSLGMEEAMQEAGIEDGDTVQIA NVEFEYVE >gi|224531372|gb|GG658180.1| GENE 143 143448 - 143813 546 121 aa, chain + ## HITS:1 COG:FN1917 KEGG:ns NR:ns ## COG: FN1917 COG0324 # Protein_GI_number: 19705222 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Fusobacterium nucleatum # 4 91 6 93 303 117 62.0 4e-27 MERKAVIIGGPTGVGKTSLSINLAKELKADIISADSAQVYQGLDIGTAKIRKEEMQGIRH HLLDVTAPTKKYSVGEFAEATNAILQEKYKKKKIFFWLEEPACIYQQSVMGFPLYHPLIS L >gi|224531372|gb|GG658180.1| GENE 144 143825 - 144355 663 176 aa, chain + ## HITS:1 COG:FN1917 KEGG:ns NR:ns ## COG: FN1917 COG0324 # Protein_GI_number: 19705222 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Fusobacterium nucleatum # 6 169 132 295 303 160 56.0 8e-40 MEKTTEELYQELLTQDVLSANTIHPNNRVRIERALEVFLLTGKSFVVLSKQNVKENPYSF HKIALERNREHLYDRINQRVDLMMEEGLLEEAKYLYQRYGEALKKLRIIGYDQLIEYFEG MISLEKAIELIKRDSRHYAKRQFTWFKQKKDYIWYNLDEQSEEEILSDIKNFLIKK >gi|224531372|gb|GG658180.1| GENE 145 144390 - 144776 254 128 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466406|ref|ZP_05630717.1| ## NR: gi|257466406|ref|ZP_05630717.1| hypothetical protein FgonA2_03076 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 128 1 128 128 213 100.0 3e-54 MKKVLVVIFLTYLFTSCSNLSSMTEPNSSQEQWKVFISEVKLAVEEKKIKMLQEKMMVSQ KNKYIYQELSKLDMEQQDIQFYFKEPEYNFPKIQGLVAIQYADRTEYFNIFYTWKNGKWW ISDLEERR >gi|224531372|gb|GG658180.1| GENE 146 144781 - 145176 529 131 aa, chain + ## HITS:1 COG:FN1915 KEGG:ns NR:ns ## COG: FN1915 COG3920 # Protein_GI_number: 19705220 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 23 131 1 109 109 107 55.0 7e-24 MKQTEVEVHIPSSLENLSVVRAMIRTYLQNHHIAEGDVVQLLSVVDELATNAIEHAYQNK LGEVIINIEKDGSKVRLFVEDSGSGYDDKKVSKEEGGIGLILARKLVDIFEIIKKEQGTV FRIEKEVREAM >gi|224531372|gb|GG658180.1| GENE 147 145181 - 145531 611 116 aa, chain + ## HITS:1 COG:FN1914 KEGG:ns NR:ns ## COG: FN1914 COG1366 # Protein_GI_number: 19705219 # Func_class: T Signal transduction mechanisms # Function: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) # Organism: Fusobacterium nucleatum # 1 116 1 115 115 127 64.0 5e-30 MENTFELTERKLENGITVIGVMGELDALVAPKLKELMNRHIDMGNIKLILDCENLVHINS LAMGILRGKLQSVKEIGGDIKIIRLNNHIQTIFDMIGLDEIFEIYATEEEAVVSFR >gi|224531372|gb|GG658180.1| GENE 148 145556 - 147121 2536 521 aa, chain + ## HITS:1 COG:FN1913 KEGG:ns NR:ns ## COG: FN1913 COG1418 # Protein_GI_number: 19705218 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Fusobacterium nucleatum # 14 521 1 508 508 637 78.0 0 MNLILGIGLGVFGLAIAFALIYKKMVIDKQIQTLNNLEDEVAKSKIKAKEILESAEKEAV SKGKEIELKAKERAYSLKEEAEKEIRNSKNEILQKEARLAKKEETLDHKIEKLENKSQEL EKTTEELEQKREEIETVKKEQEAELERITGLTKAEAKDILIAKLKEELTHDNALAIREFE NKLEDEKDRISRRILSTAIGKAAADYVADATVSVVNLPSDEMKGRIIGREGRNIRSIEAL TGVDIIIDDTPEAVVLSSFDGVKREIARITIEKLITDGRIHPGKIEEVVNKAKKEVEKEV VAAGEEAILELSIPGLHPDIIKTLGRLKYRTSYGQNVLVHSIEVAKIAATLAAEIGADVE LAKRAGLLHDIGKVLEHDVESSHAIIGGEYLKKYGEKATIINAVMAHHNEVEFETIEAIL VQAADAVSASRPGARRETLTAYIKRLEQLEEIANSFQGVESSFAIQAGRELRMIINPDRV NDDEATVMSREVAKKIEETMQYPGQIKVTIVRETRAVDYAK >gi|224531372|gb|GG658180.1| GENE 149 147199 - 148422 1569 407 aa, chain + ## HITS:1 COG:FN1106 KEGG:ns NR:ns ## COG: FN1106 COG1760 # Protein_GI_number: 19704441 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Fusobacterium nucleatum # 1 404 1 403 408 559 68.0 1e-159 MDTLRELFKIGCGPSSSHTMGPERAAKKFLAKNPDAAKYRVELYGSLAATGKGHLTDWII EETLKPKVTEIIWKADYIHPYHTNGMKFYALDQKESILDEWLVFSVGGGTIKEEKDFEET SVEKKEVYTLNKLDDIMEWCRKNRKKLWEYVEFCEGEGIWDYLWEIHQTMEEAINRGLTK EGFLPGNLKYPRKAKETYLKAKTKTRLLRFVDKMFAYSLAVSEENASAGKVVTAPTCGAS GVIPGLLRAMREEYSLDEATVLRGLAIAGLIGNLIKQNATISGAEGGCQAEVGAACSMAS AMAVYFMGGSMEEIEYAAEIGMEHHLGMTCDPVGGYVQIPCIERNAIVATRSFNTANYVM VTGGDHTISFDEVVITMKETGKDMCSAYKETSNGGLAKYYNKILAGE >gi|224531372|gb|GG658180.1| GENE 150 148427 - 149335 1017 302 aa, chain + ## HITS:1 COG:YPO1363 KEGG:ns NR:ns ## COG: YPO1363 COG2990 # Protein_GI_number: 16121643 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 27 285 40 306 315 155 37.0 8e-38 MKKEILFYWNVMQHGRAKGKVSTFDQKIKYIARNILYYPWTKQIASFLQSHPYLSHEIYR YPVLCSKIHRPYMTHNFSMQKKVDSILASYQYIDNFFQEDSLTKLYRNGRIKILQIKGKD DITIDAYLKLYSQYEKEGEFNLVLYWGEILLATLTFSIVDGRLFIGGLQGLGREYTDPEI LKKVTKSFYGMFPKRLVLEIFYSLFSEKKIAVGNRSHIYLAARYKHQEKRKIHADYDEFW QSLGANPFGEDLWALPEKLVRKEIEEIPSKKRSQYRNRYAILDEIHQLVLEFLKQESKKI VI >gi|224531372|gb|GG658180.1| GENE 151 149351 - 150244 758 297 aa, chain + ## HITS:1 COG:YPO1363 KEGG:ns NR:ns ## COG: YPO1363 COG2990 # Protein_GI_number: 16121643 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 27 293 40 315 315 156 36.0 4e-38 MKRELQFYYQIMKERYGKGTTHALRKKIKYITRTLFYYRYSMQLARFIMNDRYLSKTIHQ YRMLTEKLHKPYMTYSFSSKEKLEVIFSSYAYLELYFRDDILQELYTKTKIKVLDIVGKE DCTLSIYFKVYPNFDKEGEFNLIMYQGDILLATLTFSIWKDKMFIGGLQGLGRIYNDPEI LKKVTKNFYGLFPKRILMEVFYHLFPEPKIAVGNANHIYLAQRYRYKKERKVKADYDEFW ESLGGIQREDGLWELAEKIARKPIEEIPSKKRSQYRSRYQILDQIEELVSNFLINSK >gi|224531372|gb|GG658180.1| GENE 152 150212 - 150652 519 146 aa, chain - ## HITS:1 COG:CAC2266 KEGG:ns NR:ns ## COG: CAC2266 COG3610 # Protein_GI_number: 15895534 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 8 142 3 137 152 87 36.0 9e-18 MFVYSSPIQILAAVFTTLGFGVLFNVKGNNLLHTCIAGGISWAVYLFCSTHSCSLSFSYF LATFILSLYSEIIARIKKTPVTSILIAAMIPLAPGGGIYYTMLHILQKNYPLALSKGVDT LIIAGSMAIGVFSASALFRVYQEIRH >gi|224531372|gb|GG658180.1| GENE 153 150663 - 151424 616 253 aa, chain - ## HITS:1 COG:FN0781 KEGG:ns NR:ns ## COG: FN0781 COG2966 # Protein_GI_number: 19704116 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 10 247 13 250 256 155 34.0 8e-38 MKKEIKEEYQILSLACKTARLLLENGSEVHRIEQISKKICEYYGYSCQCFASLTCVVITL ENQEGEIFSLVERIENRNTNLNKITRISKLVEEISSHSYFSFKEELQDIQEEVTYSSLQI LLAHMIGAAFFVFLFQGNHREIFVSGLTGFCIAFTAFISQKIKLESLFVNLLQGMVCSSI PCLFYSLGWIQNVDISIISSLMIMVPGVAFINAIRDLFSGDLVTAQSRLLEVALIGMTLA TGSGIALKFFYIS >gi|224531372|gb|GG658180.1| GENE 154 151408 - 151740 384 110 aa, chain - ## HITS:1 COG:no KEGG:FN0762 NR:ns ## KEGG: FN0762 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 65 1 65 118 83 69.0 3e-15 MSELEKKILRFLLSAAAYSENAICKNLGINLEELHTSFHILEENGYLESYETFLAREQLN ESNSCSSHGGCSSCHSCSKGSCCNKGEEDYSDIRVLTEKAVEEFGSEKGN >gi|224531372|gb|GG658180.1| GENE 155 151858 - 153513 1996 551 aa, chain + ## HITS:1 COG:no KEGG:Rumal_0477 NR:ns ## KEGG: Rumal_0477 # Name: not_defined # Def: dynamin family protein # Organism: R.albus # Pathway: not_defined # 21 315 30 318 708 66 23.0 3e-09 MKTRVFQRYEDYQKYMRQFLLEEEIELEQEKKDIENRRFVVMIVGEAKSGKSSFIDAYLK TNILPIDVKQCTNALIHIRHSEHLFLEVNHHGQFLTLESEEEIREFLNREANFSKSGKQE ELELSLYYPLEKEFQEIEFIDSPGVNAEGGLGEISEEYLPSVNAIIFVKSLYGQALESTS FIDFFRGKTKRRHKESRFLLLTGSALLSKKDRESLEKDAVAKYGDYIATEKIIALDSKLK LFWNECQDLSEIEIARKIEEEDFDSATVLWYRCQGQKEAFMKALLEKSNFINLEQKLKTF AKDYEKILCLQFLENILGAYQRQIHIFEDQRQVLVDHRKDPDTLQETVNEKRREIQELSK RLEIGVQEMYKKYIQEDFLEAMLTDSYRKWDEELVVFRRKRDWKQLELWFQEKMKESAQV SLELSEQMVEECNEKLFCDGRKVYLEIFKPNSMDYSLLKAEQVEESFFQISEMLSSLKAH LKANIKRNLENCLYKYTGKIHANCHRLEYACEELLAEKWNSEKLQIKITEISEKISILEK QREEILWELKL >gi|224531372|gb|GG658180.1| GENE 156 153495 - 154970 1545 491 aa, chain + ## HITS:1 COG:FN2068 KEGG:ns NR:ns ## COG: FN2068 COG1078 # Protein_GI_number: 19705358 # Func_class: R General function prediction only # Function: HD superfamily phosphohydrolases # Organism: Fusobacterium nucleatum # 1 467 29 508 513 480 51.0 1e-135 MGVKVVKDLVHGYIYIDEKIQKCIDTPYFQRLHRVKQLTCNLLFPSVNHTRYEHSLGVMK LACDFWDTLAPFLQQRGKDEEEILLLREQLRFAALLHDVGHPAFSHLGEKFLEKTEICQA IREILPQKYSMEETFFQNTTLKGSPHELMSCYCILSKFQEVLDSSLQLDFVCRMIIGNPY AEKEKWAENICIQILNSSSIDVDKLDYLMRDNHMTGEIAPFMDVERLLASLSLDEENRLC FIAKAIPAVQSVVDSRDSLYLWVYHHHISVYTDFLLGEMLKTSIELKYMSREEFFSPQAI TEDLIADDDVYSYLRALYCREKRKKSNLYLACLSSQFFERHFLKSLWKTIYEYHDREIAW MQAGIISEIEDLNALLKDDDAMGQLAKRVQKEVGLQEGEIFFVSQHHKFYHSVQKTEIEL VLKGEKRKLSELLPQKNFEKFHQLSFFFYVKEEKKEEAYESFLKKFKNNVVGKEKIALKS TKVKIQRKLLY >gi|224531372|gb|GG658180.1| GENE 157 155105 - 156259 215 384 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 71 345 1 283 319 87 26 7e-16 MRKEKEERILECIREQEKISRISLAKLLQWNPTTVGSIVAELLKKSYIQEVEMEASTGGR KATLLSLKEDMSPSILGISFAPSFLQIGIGSIQGKIFETEKIVLTPLIIEKIWQFLFQII DKKLNKWKEIRQISVIISGLVNSEKGVSIFSPHYQWRNIEIKKILEERYQKKVFVENDVR AMALLEKSFGSCKKKRNFVVLNIGDGVGSSIFIDNKLYIGSYSGSGELGHMQVNAKGLRR CSCGKIGCLESEVSNLSILDKISSQIKLGQYSILRQKLKRDGNLSIEDFLFALGEKDLLA LQIAEESVEMITRALDAIISLLNPERVILYGSIFQSEYLYREILKKIQSILISEQGYKIS LSNFYKEAYAYAPFAVLRYLSIKN >gi|224531372|gb|GG658180.1| GENE 158 156329 - 156952 640 207 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_2792 NR:ns ## KEGG: Ilyop_2792 # Name: not_defined # Def: lysine exporter protein (LysE/YggA) # Organism: I.polytropus # Pathway: not_defined # 3 201 4 202 207 134 41.0 2e-30 MLLDTSIIKGIIAGFILSLPFGPVGIYCMEVTIVEGRWKGYVSALGMVSIDVLYGMIALL FVNKVEDIIIRYEGYLTVLIGIFLIIIAIRKLTQPVTIKRVKHEFKTLLQGYFTFMFFAL ANISSIAVIILIFTTLRVFDSESPSMLCQVPLGIFAGGASLWFFTTTVLCRLRKTVEEGN LIRVSRVASCLILILGIYLIVQAIIKI >gi|224531372|gb|GG658180.1| GENE 159 156978 - 158030 1510 350 aa, chain + ## HITS:1 COG:FN0765 KEGG:ns NR:ns ## COG: FN0765 COG0482 # Protein_GI_number: 19704100 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Fusobacterium nucleatum # 4 350 15 361 362 498 70.0 1e-141 MVNMEYREENKKVRVGVALSGGVDSSTVAYLLKKQGYDIFGVTMKTCHAEDADAKKVCED LGIDHYVLDLTEPFSEKVMDYFVEEYMRGKTPNPCMVCNRHIKFGKLLDFILGQGAQYMA TGHYTKLVDGHLSVGDDGGKDQVYFLSQVPKEKLKKIIFPVGELEKTQVRELAKELGVRV YAKKDSQEICFVEDGKLKEFLIEKTKGKVYNKGNIVDKNGKILGKHNGLAFYTIGQRKGL GISSESPLYVVELNSERNEIIVGTNEDLMREQLTAEQCNLFLVDKLEELHNMNCYAKTRS RDTLHACRLEVIGDEVIAHFIDNKVRAVTPGQGVVFYNELGQVIAGGFIK >gi|224531372|gb|GG658180.1| GENE 160 158048 - 158446 757 132 aa, chain + ## HITS:1 COG:ECs4156 KEGG:ns NR:ns ## COG: ECs4156 COG1970 # Protein_GI_number: 15833410 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 132 1 131 136 139 57.0 9e-34 MSILKEFKEFAIKGNVVDMAVGVIIGGAFGKIVASLVGDVIMPAVSCISGGQSFAEKAIE IPSKVEGAEPILIKYGLFIQNIIDFVIIAVCVFIMVKIINSLKKKEEEAPAAVPEPTKEE VLLTEIRDLLKK >gi|224531372|gb|GG658180.1| GENE 161 158500 - 159300 765 266 aa, chain - ## HITS:1 COG:CAC3095 KEGG:ns NR:ns ## COG: CAC3095 COG0351 # Protein_GI_number: 15896346 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Clostridium acetobutylicum # 1 261 4 264 265 301 59.0 7e-82 MKTVLSIAGSDSSGGAGIQADIKTMQANGVYAMTAITALTAQNTLGVNGIFEIPAEFLEK QLESIFQDIYPDAIKIGMLSSSNIIKKIAEILQKYHAKSIVLDPVMVATSGSPLIKKEAI QDLEKFLFPLATLITPNIPETELLSGISIKNEQDMERAAKKLGEKYHCSVLCKGGHQKNT AHDLLFDKGTYTWFYGEKIDNPNTHGTGCTLSSAIASNLAKEYTLEQAIQRAKNYVSSTL ESTMNLGQGSGPLDHGFDLSSPFIEK >gi|224531372|gb|GG658180.1| GENE 162 159297 - 159935 816 212 aa, chain - ## HITS:1 COG:BH1431 KEGG:ns NR:ns ## COG: BH1431 COG0352 # Protein_GI_number: 15613994 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Bacillus halodurans # 11 202 6 198 211 155 42.0 4e-38 MRKRIEIPKGIYGITGDNFSNGKSNLDCVKEMIEGGIRILQYRDKTKSMLEKYQEAKEIA KLCKEKGVIFIINDHVDLALLVNADGVHIGQDDYPVEEVRALLGNDKIIGLSTHSPEQGF KAFQNENVDYIGVGPIFPTTTKDTKAVGLEYLDFAVQNLHLPFVAIGGIQEENLEKILAR KVEHFCMVSGIVGAKNIRETVQNLWKQWEENQ >gi|224531372|gb|GG658180.1| GENE 163 159919 - 160467 509 182 aa, chain - ## HITS:1 COG:Cj1046c KEGG:ns NR:ns ## COG: Cj1046c COG0476 # Protein_GI_number: 15792373 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Campylobacter jejuni # 2 174 86 262 267 112 37.0 3e-25 MKVGIAGCGGIGSNVAYHLIRSGIINFKFGDFDIVEISNLNRQFFFHSQIGKAKALCLKE NLLQINPKAIIEAEIIHFEKENIQNFFYDCDIIIEAFDKKECKTMLLEEISTTGKPIIAA SGIADYDIENLQIKKLSSNLYVVGDFMKGIENYPTYSHKVNMVAAMMAKVVLDLGGYFEK KN >gi|224531372|gb|GG658180.1| GENE 164 160464 - 161570 1072 368 aa, chain - ## HITS:1 COG:CAC2921 KEGG:ns NR:ns ## COG: CAC2921 COG1060 # Protein_GI_number: 15896174 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Clostridium acetobutylicum # 1 366 1 366 368 347 48.0 2e-95 MSFYDEKKKWNSFDFSSYFSRVTEEDVLQSIEKEKLSEYDLLNLLSPTATKYLEKMAQKA HNLKLQHFGNVICLYIPIYVSNYCSNGCTYCGFSMKNKIHRRHMTLKEIEEEAKEIAKTK IEHIILLTGEVKELSTLQYIKEGVSILKKYFASVSVEVMPLETEEYATLKKVGLDGMTIY QETYNEEVYDKVHLYGKKKDYLFRLGTPERAAEAGLRTVGIGALFGLSNIREEAFFAGLH LQYLIHHYPNTTFGISLPRINPAEGGFQPDHPLDDIQFVQFLTAYRIFQPKADLSVSTRE IPEFRDHLLALGVTRISAGSKTDVGGYTNQDASTAQFEISDSRSVEETVAAVEKQGFQVI YKDWENLV >gi|224531372|gb|GG658180.1| GENE 165 161567 - 162346 1008 259 aa, chain - ## HITS:1 COG:CAC2922 KEGG:ns NR:ns ## COG: CAC2922 COG2022 # Protein_GI_number: 15896175 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Clostridium acetobutylicum # 1 253 1 254 255 299 64.0 3e-81 MDQLELQGRIFNSRLLTGTGKFRDKKLIEPMLESSESEIITMALRRVNFQNPQENILNYI PKKITLLPNTSGARNAEEAIKIAMIAREAGCGDFIKIEVINDMKYLLPNNEETIKATKFL AKEGFIVLPYMYPDIYAAKALEDAGAAAVMPLGAPIGSNKGLLSKSFLEILNENKRVPLI VDAGIGTPSQAAEAMEMGVDAVLVNTAIATAEDPVMMGKAFSMAVKAGRMAYLAKLATTS KYAQASSPLTDFLFRGDKE >gi|224531372|gb|GG658180.1| GENE 166 162365 - 162577 304 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257466427|ref|ZP_05630738.1| ## NR: gi|257466427|ref|ZP_05630738.1| hypothetical protein FgonA2_03181 [Fusobacterium gonidiaformans ATCC 25563] conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] # 1 70 1 70 70 118 100.0 1e-25 MQVTINGLDREIPENMNILTLVEKLSAENNISLIGAIVLIDEELIPKATWEKTFPKASSK IEVLSFVSGG >gi|224531372|gb|GG658180.1| GENE 167 162756 - 163223 576 155 aa, chain - ## HITS:1 COG:TM0410 KEGG:ns NR:ns ## COG: TM0410 COG1683 # Protein_GI_number: 15643176 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 5 141 2 145 149 147 51.0 6e-36 MSKEKILISACLLGIPCRYDGKDNKIEKLSSLQEYYDFVPVCPEQLGGLSTPRCPCEIQG NKVISKEGKDCSEEFQKGAEESLKLIKKWKIQKAILKAKSPSCGYGFIYDGSFTRKLIKG NGYTANLLEKEGVSIFCETELDKIFKEVYNKLTIK >gi|224531372|gb|GG658180.1| GENE 168 163378 - 166896 4543 1172 aa, chain + ## HITS:1 COG:FN1129 KEGG:ns NR:ns ## COG: FN1129 COG1196 # Protein_GI_number: 19704464 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Fusobacterium nucleatum # 1 1168 11 1177 1193 844 49.0 0 MYLKAVEVHGFKSFGEKVYIEFNQGITSIVGPNGSGKSNILDAVLWVLGEQSYKNIRAKE SQDVIFSGGKDKKAMNQAEVSLIIDNEDGYFEEFPQEDLTITRKIHMTGENEYFINHQKS RLKDISALFLDTGIGKSAYSVIGQGKVERIINSSPKEVKGIIEEAAGIKKFQASKNEAMK NLENVELELEKIELVLQEVRENKNRVEKQAEVAQRYLDVREEKQRAQKSIFLTDYHQKQE EQEIAGKEQEGFLENCQKFDKELKETEENIHRLEEEKKNLQEKMEKISSKNESLRTFLEE QEREKVRVQERQAAFQRELEEKKERLIQEKQKREEREKNKRSFFVKKEELKKKIEDLEEK NQVFEVLLKNLDQEKKIFEETLEVKDHKLREVELQKLNVINDLETSSKRMQSSENRVKNL ETDAEESQKKLEEVKKEFLIAEEKRKQQEQKLQDSEKRTQFVEEEISRLSIALNKASEKL RQLEFEEKRSSARYEAILRMEENNEGYYKGVREVLQANIPGVAGVFLELIQIPEYLERAL EAAVSGNLQDIVVENSDVAKRTIQYLREKKAGKASFLPLDMLKINKKTVSQKISGVLGVA ADLVASEEKYRKAVDFVLGNLLVVENYDIAIQISKANFFSGNIVTLNGELVSSRGRISGG DQNKGIASQLLERKKERKKLEEELEVLRSRIQKGNQALDEYSKQLEKYENEISNLDMMGD NLRKQKKLAEEYVESLQEKISRMEKEIRIATMELEEEIRYTKEFEKKMNSTHAQKEELIA LSSTLKQEIQEIREKNKELQEKIETQKEKISDIRILFLNSKNHWEQLSQEEERLGKEEKE FQGMEEELERRIESLQNGKLSLEETQLELAKKIENTLEEYHKESKEMEKLHEQDKQNVEK ERELHKVQKEIESRLLFMKDKYQRTEEKLERIREESILLEEELEKLTEIEAEIFPFEKMR SRKENLRNLEAKLLSFGDVNLLAIEEFRELKEKYSYLGNQRDDLVRGKKVLLDLISEIKD TIYERFQEAYHIISENFNKMCMETLDNSEGKLNLLEAEEFENAGVEIFVKFKNKKRQSLS LLSGGEKSMVAIAFIMSIFMYKPSPFTFLDEIEAALDEKNTRKLIAKLKEFTSQSQFILI THNKDTMRESDSIFGVTMNKEIGISKVVPVKF >gi|224531372|gb|GG658180.1| GENE 169 166915 - 167922 1291 335 aa, chain + ## HITS:1 COG:FN1130 KEGG:ns NR:ns ## COG: FN1130 COG1663 # Protein_GI_number: 19704465 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Fusobacterium nucleatum # 10 330 1 321 325 474 70.0 1e-134 MKILSYIYYLITSLRNFLYDKGFLPIYHVKDVEIICIGNISVGGTGKTPAVQFFVKKLQK MGRNVAVVSRGYRGKRKNEPCLVSDGRVIFASPQESGDEPYIHALNLTVPIIVSKNRYHA CLFARKHFHVDTIVLDDGFQHRKLARNRDVVLVDATNPFGGRHLLPWGTLRESFKKAAKR AEEFIITKADLVSEREIEKIKKYLKHSFHKEISVAKHGVHSLRDMSGNLKPLFWIEGKRV LIFSGLANPLNFEKTVLALEPSYIERIDFIDHHNFKEKDLLRIERRAEQMEADYILTTEK DFVKFPKHLDIPNLYVLKIEFTMLEDHSLETWRVF >gi|224531372|gb|GG658180.1| GENE 170 167907 - 168479 383 190 aa, chain + ## HITS:1 COG:no KEGG:FN1131 NR:ns ## KEGG: FN1131 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 5 190 1 186 257 125 38.0 1e-27 MEGILKKAEIVKKFRSVSIEELEKEIQERGKYKVFSEFAEIMDKRSYFTVSIEGEICRKK ANPILFEFPYEEDTKKLASMILFYGTPEERQVIHAISRLSNIEIPNLKEKLMTTLVNRNF DFAKRYAKELFLRDERAFWKVLNTFVELGEKENQKREVLKAFEVCMNIVKYDERLFHLYL SFLTRYRDNY >gi|224531372|gb|GG658180.1| GENE 171 168488 - 169099 826 203 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_1419 NR:ns ## KEGG: Ilyop_1419 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 5 203 65 261 261 185 50.0 9e-46 MAKVYAYFLELTGESGVVDTWAECQEKTKGVKKARYKSFPDRIQAGNWLSRGAIYEKKEA LQKKIIQKMELPEGIYFDAGTGRGIGVEVRVSDKNGSSLLEEGCNEFGNILLGFSKTNNY GELTGLSKAIDIALEKKIFHIYGDSNLVLEFWSQGRYHPEKLEKETVILIQDVIKKRKQF EALGGKISYISGDINPADLGFHK >gi|224531372|gb|GG658180.1| GENE 172 169112 - 169789 788 225 aa, chain + ## HITS:1 COG:FN0996 KEGG:ns NR:ns ## COG: FN0996 COG5522 # Protein_GI_number: 19704331 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Fusobacterium nucleatum # 2 218 3 220 232 172 49.0 4e-43 MEMFVLFGTSHMIMILIGVISVLAFIGLGFLIKPQALAKFVSVVVLGIKIAEMYYRHIFL GEEIYRMLPFHLCNLTIILSLFMMFFHSKFLFQLVYFWFVGAIFAIITPDIIFDYPNFWT ISFFVTHFYLVFSALFALIHFHFRPTKKGMIMAFLFINLWAVVMYFVNQELGTNYLFVNR IPETTTLLSYFGAWPYYFLPVEGIYLIQSILLYLPFRKANIKFNF >gi|224531372|gb|GG658180.1| GENE 173 169860 - 170939 1495 359 aa, chain + ## HITS:1 COG:FN1332 KEGG:ns NR:ns ## COG: FN1332 COG0216 # Protein_GI_number: 19704667 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Fusobacterium nucleatum # 1 356 9 363 365 513 83.0 1e-145 MFDKLEEVVARYEELHTLLSSPEVLNDPKKMIECNKNLNALTPLIEKYKEYKAVKDDVEF IKESLKTEKDEDMRSMMQEELKENEEQMPELEKELKILLLPKDPNDDNNVIVEIRGGAGG DEAAIFAGDLFRMYCRYAERKKWKIEIIEKQDLEGLDGLKEVAFSIQGFGAYSKLKFESG VHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVHIDPKDLKIDTYRSGGAGGQHVNMT DSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEVEKQRSEIEGERRLQVGT GDRAEKIRTYNFPQGRITDHRIKLTVHQLEAFLDGDLDEMIDALITFSQAEMLSASGEE >gi|224531372|gb|GG658180.1| GENE 174 170941 - 172047 325 368 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|170727358|ref|YP_001761384.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Shewanella woodyi ATCC 51908] # 129 338 64 275 314 129 36 1e-28 MNLLDILQFAEEYLKKYSFSKSRLESELLIADVLHLDRLSLYVNYDRMLEEEEKLKIKKY LFQMAKTKKSYRELREEREEENFQEENRKLLQQSIEYLKKYEVPNAKLDAEYIFADVLKV NRNMLSLYLHREISEEQKQELREKLIQRGKFRKPLQYILGKWEFYGYEFITDERALIPRA DTEILVEQAKILSLEKENPKILDIGTGTGAIAITLAKEVPEAEVLGIDISERALSLAKEN KEYQFVRNVSFLQSNLFEKLEGKSFDIIVSNPPYIPQEEYEDLMPEVKNYEPKNALTDAG DGYSFYQRIIQEANGYLNEKGYLLFEVGYQQAEQVKQWMEEEKFEDLYIAEDYAGHQRVV LGRKGGEN >gi|224531372|gb|GG658180.1| GENE 175 172026 - 172592 315 188 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 186 7 192 199 125 34 2e-27 KKRRRKLRIIAGEARSRKLKTRKGFETRPTLANVKEALFSMIAPHLEDSVFLDLFSGSGN IALEALSRGAKRAVMIEKDTEALRFIIENVNALGFQDRCRAYKNDVFRAIEILARKGEKF SIIFMDPPYQDNVCTKVLEHIEKFEILGEEGIIICEHHAFEEMAERVGSFQKIDERKYQK KVITFYAR >gi|224531372|gb|GG658180.1| GENE 176 172607 - 173125 982 172 aa, chain + ## HITS:1 COG:FN0342 KEGG:ns NR:ns ## COG: FN0342 COG0652 # Protein_GI_number: 19703685 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Fusobacterium nucleatum # 1 161 1 161 167 221 73.0 8e-58 MQLQAMIKTDKGDIRLQLFPEVAPMTVTNFVYLARRGYYNGLKFHRVIPDFMIQGGDPTG TGAGGPGYQFGDEFQKGVVFDKKGILAMANAGPNTNASQFFITHVPTDWLNYKHTIFGEV VSEEDQVVVDKIAQGDLMNEIQILGDVEDFLQSQEEIVKQLDGIFGEGHEEK >gi|224531372|gb|GG658180.1| GENE 177 173112 - 173327 376 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466438|ref|ZP_05630749.1| ## NR: gi|257466438|ref|ZP_05630749.1| exodeoxyribonuclease VII small subunit [Fusobacterium gonidiaformans ATCC 25563] exodeoxyribonuclease VII small subunit [Fusobacterium gonidiaformans ATCC 25563] exodeoxyribonuclease VII small subunit [Fusobacterium gonidiaformans ATCC 25563] # 1 71 1 71 71 76 100.0 6e-13 MKKNSFEANLEEIDTIIAKMESGELSLEDSIKEYEKAMKLLKKSSDLLENAEGKLYQVMK DQEGELQVEEL >gi|224531372|gb|GG658180.1| GENE 178 173314 - 174186 1235 290 aa, chain + ## HITS:1 COG:FN1327 KEGG:ns NR:ns ## COG: FN1327 COG0142 # Protein_GI_number: 19704662 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Fusobacterium nucleatum # 1 290 8 297 297 293 52.0 2e-79 MKNYREYFNKRFGEVLTQYNTPVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGKERDLGF PFAAALEMIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNAFSVMIR GSMGKVAAEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHKTGRLLL LPILVACILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGKALKSDEKLNKS TYPSIFGLEKSKELLTETLQEARLVLEKVFKKEELEEFFELTEFMEKRTK >gi|224531372|gb|GG658180.1| GENE 179 174186 - 175217 1294 343 aa, chain + ## HITS:1 COG:FN1330 KEGG:ns NR:ns ## COG: FN1330 COG0809 # Protein_GI_number: 19704665 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Fusobacterium nucleatum # 1 343 9 351 351 518 78.0 1e-147 MSTKLHDYDYHLPEELIGQTPREPRDHAKLLLVNRDTKTIEDKYFYDILDYLQKGDVLVR NSTKVIPARLYGQKETGGILEVLLVKRKDLDTWECLLKPAKKLKLGQKIYIGPNSELVAE LLEIQEDGNRILKFSYEGSFEENLDRLGTMPLPPYIVEKLEDQEMYQTVYAKRGESVAAP TAGLHFTEELLQKIQEKGIEIVDIYLEVGLGTFRPVQTEDVLDHKMHEELFEIPEEAAQK INQAKAEGRRIISVGTTTTRALESSVDENGILLAQKKNTGIFIYPGYQFQIVDALITNFH LPKSTLLMLVSAFSEREFILEIYQHAVEEKYHFFSFGDAMFIY >gi|224531372|gb|GG658180.1| GENE 180 175227 - 177203 2087 658 aa, chain + ## HITS:1 COG:FN1128 KEGG:ns NR:ns ## COG: FN1128 COG1506 # Protein_GI_number: 19704463 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Fusobacterium nucleatum # 1 657 1 660 660 799 59.0 0 MKKIEIKTFLDYSFLSNVRFSKDGKYISYTKTKANLEKNDYEHYVYIYNTGTKETKEYTS LGKEKNVFWINEHQFLFQTSRDAGLQEKIKEGEEWTEYYLMDIQGGEAKVFLQLPYSVTG MQACSSGFIFIANYANYGISLHNLTGEERAKAIAKKKEEGDYEVLDEIPFWSNGAGFTNK QRNRLYFYEKESKKIEPLTPEFMNVEYFKVSGDKVLFIAEEYQGKLEQTNALYEYDVKQK ECTCLLEDGKYNFSFADYMGEDIVCAASDMQEFGINENHKLYFVKDGSLELFYANDTWLL STVGSDCKFGGGKTFHTTDNELYFLSTLEDFSVINCLHRDGRLEFVTEKDGSVDFFDIHG ERLVYGAMKDYGLQELYVKENLKETCITKHNQKILEEYSISKPEKIFMESHGEQIEIYVI KPIDFKEGKDYPAILDIHGGPKTVYGNVFYHEMQVWANMGYFVFFTNPHGSDGRGNLFMD IRGKYGSIDYEDLMKATDIVLEKYPIDKARVGVTGGSYGGFMTNWIIGHTDRFACAASQR SISNWISKFGTTDIGYYFNADQNQSTPWDNVEKLWSHSPLKYANKVKTPTLFIHSEQDYR CWLAEGLQMFTALKYHGVEARLCMFRGENHELSRSGKPKHRVRRLEEITNWFEKYLKK >gi|224531372|gb|GG658180.1| GENE 181 177212 - 178165 1021 317 aa, chain + ## HITS:1 COG:FN0714 KEGG:ns NR:ns ## COG: FN0714 COG1902 # Protein_GI_number: 19704049 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Fusobacterium nucleatum # 4 311 6 314 314 392 64.0 1e-109 MKTIFTPYQIKGISFKNRIVLPPLVRFSLLGTDGKVNQNLLDWYERIAKTEVGLIVVEAT AVEEAGKLRENQLGIWSDEMIEGLSKIVEICHHYETPVFIQIHHAGFKEKISEVSTERLD EILDLFVKAFHRAKKAGFDGIEIHGAHGYLLSQLSSSVWNHREDCYGNRFYFAKQLIEKT RDLFDEGFLLSYRMSGNDPEVADGIEMAKFLEKMGIDLLHVSNGVPKEVKQAVKISNYPS DFPFHWITFLGTEIKKAVKIPVIAVYGIKTEEQASCLIEDFDLDFVAVGRAMIFYPNWME KCRKDFEKRMKQKKNEN >gi|224531372|gb|GG658180.1| GENE 182 178155 - 178853 812 232 aa, chain + ## HITS:1 COG:FN0717 KEGG:ns NR:ns ## COG: FN0717 COG1187 # Protein_GI_number: 19704052 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Fusobacterium nucleatum # 1 226 1 226 226 285 68.0 6e-77 MRIDKFLVECGVGSRKEVKELLKSRKIRVNGLFITSPKETIEEEKDEVYYGEKKLSYQEF RYYILHKKAGYVTALEDSREATVMDLLPEWVIKKDLAPVGRLDKDTEGLLLFTNDGKLNH RLLSPKSHVDKTYHASLECDITEEALEKLREGVMIGEYKTLPAKAEKLEDRKIALTIREG KFHQVKKMLEAVGNKVIYLKRISFGKLVLGDLELGAVKEVSLEDIVSLEKES >gi|224531372|gb|GG658180.1| GENE 183 178867 - 179076 311 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466444|ref|ZP_05630755.1| ## NR: gi|257466444|ref|ZP_05630755.1| hypothetical protein FgonA2_03266 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 69 1 69 69 94 100.0 3e-18 MKKIMMLLILSTVLLTACTTSVGVGTGFNLGGLGVGLSTSAPLKKQKTKTVDEVATEALQ ETKVQEKAR >gi|224531372|gb|GG658180.1| GENE 184 179084 - 180112 854 342 aa, chain + ## HITS:1 COG:FN0719 KEGG:ns NR:ns ## COG: FN0719 COG4394 # Protein_GI_number: 19704054 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 341 1 345 350 310 50.0 3e-84 MKTRSIDIFCQVIDNFGDIGVCYRLYKELSSLFPETSIRLLLDKTEEFFALCPGYQEISY KTYAEIEAEKESVETAEVVIEAFACEIPDNYLQKAYHNSKLIVNLEYFSAEDWTEDFHLQ ESILGIGTCRKFFFMPGISEKTGGILTKAYSPNLSLQDFGITREDYDLVGSIFSYEKDFT SLFESLQKIGKRVCLCILGEKSQESVRKSLGNFKRYDRIKLKFLPFYSQENYEALIQKCD FNFVRGEDSFARALLTGKPFLWHIYPQENDLHFQKLQSFLEKYCPENKALQNTFFSYNRE ETDYSYFWEHFKEIREQNEEFRDYIQKHCNLGIKLKQFIENF >gi|224531372|gb|GG658180.1| GENE 185 180126 - 180689 850 187 aa, chain + ## HITS:1 COG:FN0720 KEGG:ns NR:ns ## COG: FN0720 COG0231 # Protein_GI_number: 19704055 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Fusobacterium nucleatum # 1 187 1 187 187 323 90.0 1e-88 MKIAQELRAGSTIKIGNDPFVVLKAEYNKSGRNAAVVKFKMKNLISGNISDSVYKADDKM DDIKLDKVKAIYSYNDGSFYVFSNPETWESIELKGEDLGDALNYLEEEMELEVVYYESTP VAVEVPTFLERQIEYTEPGLRGDTSGKVMKPARINTGYEIQVPLFVEQGEWIKIDTRTNE YVERVKK >gi|224531372|gb|GG658180.1| GENE 186 180806 - 181117 365 103 aa, chain + ## HITS:1 COG:FN1394 KEGG:ns NR:ns ## COG: FN1394 COG2739 # Protein_GI_number: 19704726 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 103 1 103 103 91 59.0 3e-19 MDLQEFLEIGSLLELYKNLLSEKQKEYLIEHFEEDYSLSEIATTHNVSRQAVSDNIKRGI KVLNDYEKKLKMFEQKRKLREKLESLQRDFRPEVLKKIMDDLL >gi|224531372|gb|GG658180.1| GENE 187 181128 - 182477 1930 449 aa, chain + ## HITS:1 COG:FN1393 KEGG:ns NR:ns ## COG: FN1393 COG0541 # Protein_GI_number: 19704725 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Fusobacterium nucleatum # 1 449 1 444 444 652 79.0 0 MLDNLGSRFQDIFKKVRGHGKLSESNIKDALKEVKMSLLEADVNYKVVKDFIESIREKAI GTEVLKGINPGQQFIKLVNDELVQLLGGTNARLTKAPKNPTVLMLSGLQGAGKTTFAGKL AKFLKKQNEKVLLVAADVYRPAAIKQLQVLGQQVDVAVYAEEGHQDVLGICERALEKAKE EHATYMIIDTAGRLHIDEALMEELRNIKRLTRPQEILLVVDSMIGQDAVNLAKSFNESLS IDGVVLTKLDGDTRGGAALSIKSVVGKPIKFIGVGEKLDDIELFHPDRLVSRILGMGDVV SLVEKAQSAIEEEDAKSLEEKIRTQKFDLNDFLKQLQNIKKLGSLGSILKLIPGMGQIGD LAPAEKEMKKVEAIIQSMTKQERKKPEILKASRKQRIAKGSGTDVADINRLLKQFDQMKT MMKMFAGGKMPNFPNLNGMMSGKGGKFPF >gi|224531372|gb|GG658180.1| GENE 188 182518 - 182781 407 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739055|ref|ZP_04569536.1| SSU ribosomal protein S16P [Fusobacterium sp. 2_1_31] # 1 87 1 87 87 161 91 4e-38 MLKLRLTRLGDKKRPSYRLVVMEDLSKRDGKAVAYLGNYFPLEDSKVVLKEEEILKFLSN GAQPTRTVKSILVKAGIWAKFEESKKK >gi|224531372|gb|GG658180.1| GENE 189 182854 - 183768 1000 304 aa, chain + ## HITS:1 COG:FN0238 KEGG:ns NR:ns ## COG: FN0238 COG4874 # Protein_GI_number: 19703583 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria containing a pentein-type domain # Organism: Fusobacterium nucleatum # 1 304 5 309 310 415 67.0 1e-116 MQSHITGKVLMVRPVCFGYNEETAVNNYYQKKDKKSVREIQEEALEEFDTMVEVLRRYKI EVKVLEDTLHPYTPDSIFPNNWFSSHENGSIVLYPMFAENRRLERREDIYDFFAEDKMNI LDYSPLEKEEIYLEGTGSLVLDRKNRKAYCSLSKRADERLLDIFCQDLVYQKIAFHSYQT VEMERKEIYHTNVMMSVGEKFAILCADSIDNLEERAKVIASLEEDGKEIIFITEEQVEHF LGNALELKNEEGVHLCIMSATAEKILTEEQRKSLEKYAVIIPVKVSTIEKYGGGSARCML AELY >gi|224531372|gb|GG658180.1| GENE 190 183884 - 184387 687 167 aa, chain - ## HITS:1 COG:FN0772 KEGG:ns NR:ns ## COG: FN0772 COG0716 # Protein_GI_number: 19704107 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 166 1 166 169 132 41.0 2e-31 MKTLVVYSSLTGNTKKATTWAFEAVIGEKELFSVEEAMKIDTSSYDRIIEGFWVDKGTLD PKSRKFLKQIKGKELIFIGTLGAYPNSKHAIKVMERSKKIAEENNCYLGTCMVQGKMSDV LLKSMDKFPLNLIFRKTEERLERIQVASLHPNEEDKEKIQEFVRNLY >gi|224531372|gb|GG658180.1| GENE 191 184540 - 185292 914 250 aa, chain + ## HITS:1 COG:no KEGG:FN1183 NR:ns ## KEGG: FN1183 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 1 242 1 243 250 293 62.0 7e-78 MRFILKFQLSTMRIPIEIRRTMISFIKKSLTQAHDGKYYENFFKDTELKDYCFSIIYPLK QFHKNEIELKKPEISVVFSCTEKQNIAFLLMNVFLLQKNKKFPLPDDEYMILKEIVPVRE KEILGNVGIFRSTLGGGIVVREHIKEEKKDIYYSVGDENFLEKLDWIMKKRFERLGYPKE MIQFSSKLLEGKKVIVKHFGLTFPVTNGIFEIHAPKILLKEIYRTGLGSRLSQGLGMLEY LGPGGEENEA >gi|224531372|gb|GG658180.1| GENE 192 185282 - 186034 838 250 aa, chain + ## HITS:1 COG:no KEGG:FN1182 NR:ns ## KEGG: FN1182 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 250 1 252 517 248 57.0 2e-64 MKHNLDAGVYGFDTAISASDWRYSAAIVGLRYYLQEFQKKYEIKKNIEIDGIFDDFFLYS SQDIQENTYLSFVEKFYGEDLPHKALENKLKSSSVFSPEEEKWIKEKMGANTTLKKVFSK IKFTGENKQEVLNLIEENRYTIIKETFRNKKNLYDNYCQSGVLFTEAAKDSVCRVKGYYI DAGKKGKSTAYRFRTDSIIYEDDIIFDFIPFAFTGSTFETVFLNDNADLDILYKVNFNVK TFFEKKNKRK >gi|224531372|gb|GG658180.1| GENE 193 186052 - 186696 566 214 aa, chain + ## HITS:1 COG:no KEGG:FN1182 NR:ns ## KEGG: FN1182 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 214 287 511 517 146 45.0 5e-34 MELLQNQTHPMKYGMEIIYKDREKTHFNTWYLRNESIRIFQKVDIPKINLNMKVGENYRN ILKETFQNILNLVRLDLIIDFLLKEREKSNLPSIYFAIKELLKINIEIKNIGGENMEFNK NQKFAYACAKEIVKIFKKNNIEKKLDSYRQKLTSSLIFKDYKRTLDILMQLSNYSGVYFG FLYDFMENPSKNDDIIRMFILELNTENFENKVEK >gi|224531372|gb|GG658180.1| GENE 194 186716 - 187597 1238 293 aa, chain + ## HITS:1 COG:FN1181 KEGG:ns NR:ns ## COG: FN1181 COG1857 # Protein_GI_number: 19704516 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Fusobacterium nucleatum # 1 293 1 300 300 408 76.0 1e-114 MKKNALTLTVVANMTSNYSEGLGNISSVQKVYKNRAVYSIRSRESLKNVLMVQSGMYEDL QTVVNGATQKNVTPELNASNCRALEGGYMCTAADTYVRNSSFYLTDAISTESFVNETRFH NNLYLATNYAKANGLNVQANAGDVGLMPYQYEYEKSLKVYSITIDLEKIGKDENFNQEAD KTEKYERVKSILEAIQNLSLVVKGNLDNAEPMFVIGGLSERKTHYFENVVKTEQGALVIG EDIVLKKNKGFRCALLRGDNFSNEEEILKMLQPISMEVFFEDLIKEVKDYYQA >gi|224531372|gb|GG658180.1| GENE 195 187611 - 188720 1087 369 aa, chain + ## HITS:1 COG:no KEGG:CTC01145 NR:ns ## KEGG: CTC01145 # Name: not_defined # Def: hypothetical protein # Organism: C.tetani # Pathway: not_defined # 1 351 1 348 360 306 52.0 1e-81 MKALRIVLRQTSANYRKTGCLENKMTYPLPLPSTIIGALHNICDYKEYHPMDVSIQGKFS SLSKRAYTDYCFLNSVMDDRGILVKMANGDCLSNSFLRVASSKKPQGNSFKKRISIQVHD ENLFEEYCHLKDISEEIKIKKDTVYKEKLSEFKKKKTELSSQKKLLDKNSEEYKKILEEE KKWKIEEKNYVEEFKKYEEENYTKPIKSYRSLVTSLKFYEILHDIFLILHIRAEEEVLKE IHDNIYRLTSLGRSEDFLEVEDCSVVELQEFQEDIYSKENANTSIYLNRKDVAEEKIFSF EVDSNHSSGGTKYYVNKNYTLEENKRIFTKIPVLYSMNFGAQESSENVKLDFWGTDSEGN KIPVLVNFL >gi|224531372|gb|GG658180.1| GENE 196 188730 - 190931 1793 733 aa, chain + ## HITS:1 COG:FN1179 KEGG:ns NR:ns ## COG: FN1179 COG1203 # Protein_GI_number: 19704514 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Fusobacterium nucleatum # 2 733 9 812 812 644 48.0 0 MEYYAKPNKTIAQHNFDLQQARECLVRFGYLYSEEENRILREAIEYHDLGKMNEFFQKRV LSQRKIKFNPELEVEHNILSIYMIDPKKYLKDEYHSILYAVLFHHRYSDVVQTMVERKKD IERLLQNFTSYRLPMGLKISSLHTLTNQKTLGLLMKCDYAASGNYQIEYPNDFLEEKLEL WSSKLGILWNDLQEFCYSHKNESIIAIADTGMGKTEAALRWIGNSKAFFTLPIRTAINAI YDRVSRDILERENLEERLSLLHSTSLEYYAKNIAEEELDIFEYHQRGKHLSLPLTICTAD QIFNFILKYKGYEMKLATLSYSKVVLDEIQMYDPSLLAAIILGIKTILELGGKIGIVTAT FPPIVEALMKKEIPDFSFQKQIFHSKNNVIRHNLISYDKRMGTEEMIDLFLRNKKIGKSN KILVVCNTIKDAQAMYDTLLEQEELSPYLHLLHSRFIKEDRARKEKEILAFGKTEIKENG IWISTQLVEASLDIDFDYLFTELQDLSSLFQRFGRCNRKGKKSTKEANCYVYLKTEEGYL KEAGSSYGFIDKVIYHLSREALLGHTGEISEELKTKWIEEFLSYEKLEQSSFLSEFRDAI EEYKNILNSSENTSEELTRLRDIQNVTVIPLPVYQKHEEEIRDLEENLKNSEMTKEEKLR FKEEIMKHTVTVPKYMLENYKKALQDGNVDCMPVSSVKISNYEKVIILECLYDSQRGFQA KKFVEKNINFAFL >gi|224531372|gb|GG658180.1| GENE 197 190951 - 191445 428 164 aa, chain + ## HITS:1 COG:FN1178 KEGG:ns NR:ns ## COG: FN1178 COG1468 # Protein_GI_number: 19704513 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Fusobacterium nucleatum # 1 164 1 164 164 210 75.0 7e-55 MKKEITGIMVYYYEVCQRKLWYFLHEIQMESDNSNVILGRLLEENTYTRDEKKVAIDGII NIDFFRTKKVLHEIKKSKVMEQASILQVQYYLYYLEKKGLTGIKGVLDYPLLKQKVEVEL TWIDRKHLDEILSKIELIMELDIPPDIEKKSICKKCAYFDLCFV >gi|224531372|gb|GG658180.1| GENE 198 191456 - 192448 932 330 aa, chain + ## HITS:1 COG:FN1177 KEGG:ns NR:ns ## COG: FN1177 COG1518 # Protein_GI_number: 19704512 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Fusobacterium nucleatum # 1 330 9 338 338 548 88.0 1e-156 MKRSYFLYSNGTLKRKDNTITFINENEEKKDIPIEMIDDIYIMSEMNFNTKFINYISQFG IPIHFFNYYTFYTGSFYPRETAVSGQLLVKQVEHYLDKDKRIEIAREFIEGASFNIYRNL RYYNGRGKEVKTYMHQIEELRKQLSKVTDVEELMGYEGNIRKIYYEAWNVIINQEIDFEK RVKNPPDNMINSLISFVNTLFYTKVLGEIYKTQLNSTVSYLHQPSTKRFSLSLDISEIFK PLVVDRLIFSLLNKNQITEKSFIKDFEYLRLKEDASKLIVQELEERLKQVIQHKDLNRKV SYQYLIRLECYKLIKHLLGEKKYLSFQMWW >gi|224531372|gb|GG658180.1| GENE 199 192455 - 192733 370 92 aa, chain + ## HITS:1 COG:FN1176 KEGG:ns NR:ns ## COG: FN1176 COG1343 # Protein_GI_number: 19704511 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Fusobacterium nucleatum # 1 92 15 106 106 157 93.0 4e-39 MYVVVVYDISLDEKGSYHWRKIFQICKRYLHHIQNSVFEGELSEVDIVRLKYEVSDYIRD NLDSFIIFKSRNERWMEKEMLGLQEDKTDNFL >gi|224531372|gb|GG658180.1| GENE 200 198547 - 198630 115 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAVVEGFEPSTPGSEDQCSIQLSYTTV >gi|224531372|gb|GG658180.1| GENE 201 198982 - 200694 1971 570 aa, chain + ## HITS:1 COG:FN0506 KEGG:ns NR:ns ## COG: FN0506 COG0018 # Protein_GI_number: 19703841 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 570 1 569 569 817 71.0 0 MLLVNKELSKIFTSTVTKLYSDKEIKEVEITAATNEKFGDFQCNFAMMNSKIIGKNPRMI AEEIQQNLIENEVIEKLEIAGPGFINIFLKEAYLSSFIKKIGKEEFDFSFLDRKGDVIID FSSPNIAKRMHIGHLRSTIIGDAICRIYRYLGYHVVGDNHIGDWGTQFGKLIIGYHKWLD KDAYQRNAIEELERVYVKFSQEAEEHPELEEEARLELKKLQDGDEENHNLWKEFIKVSME EYQKLYDRLDVHFDTFYGESFYHPIMPEVVKELVDKGIAKEDDGAKVVFFPEEENLFPCI VQKKDGAFLYATSDIATVKFRLNTYDVNHLIYLTDERQQDHFKQFFRVTEMLGWDVKKYH VWFGIMRFADGVFSTRKGNVIRLEELLDEGKRRAYEIVKEKNPSLPEEEKQHIAEVVGVG AIKYADLSQNRQSPIIFEWDKILSFEGNTAPYLQYSYARVQSVLDKAKDLGKAATEDTCL ILKDKYERSLANYMTIFPSSVLKAAETCKPNLIADYLYDLSKKLNSFYNNCPILNQEDDI LKSRAYLAKQAGEIIKQGLSLLGIQTLDRM >gi|224531372|gb|GG658180.1| GENE 202 200885 - 203059 1713 724 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein [Symbiobacterium thermophilum IAM 14863] # 1 721 2 720 764 664 49 0.0 TMDNIFSKVAKELLLRENQVESTVKLLDEGATVPFISRYRKEITGNLDEVQITDILEKVQ YLRNLEKRKEEVLRLIEEQGKLTEELTKAIQVAEKLQEVEDIYFPYRKKKKTKADVAIEK GLEPLADFFLLAHSVQEIETKAQEFITEEVPNIEEAIEGAKLIWAQKVSEKAEYRERIRE ILLKYGKMDSKESKKAKELDEKAVYQDYYEYSESLAKIPSHRILAVNRGEKEGILSVNLS LEEKEKQHVESLLLRSFTKEVELYELFHSIIRDAYDRLLFPAVEREVRNILTDKAEEEAI LVFRENLKNLLLQAPLHEKTILALDPGYRTGCKVAILDKHGFYQENDVFFLVEGMHHEKQ LEDARKKALKYIKKYGIDLVVIGNGTASRETESFVAKLIREEKLKIQYLIANEAGASVYS ASKLAAEEFPDLDVTVRGAISIGRRIQDPLAELVKIDPKSIGVGMYQHDVNQGRLDESLD QVITTVVNNVGANLNTASWALLSHISGIKKTVAKNIVEYRKENGNFTKRESLLKVKGLGP KAYEQMAGFLVIPEGDNILDNTIIHPESYHIAEKMLKEIGFSLEEYDKNLGEAREKLKTV KVEEFAEKHNFGLETCKDVYEALRKDRRDPRDDFQKPLLKSDILSIENLSVGMELEGTVR NVVKFGAFVDIGLKNDALLHISAISDEFVSDPSKVLSVGQIIKVRIKEIDKERGRVGLTR KKEL >gi|224531372|gb|GG658180.1| GENE 203 203060 - 205477 2358 805 aa, chain + ## HITS:1 COG:FN0066 KEGG:ns NR:ns ## COG: FN0066 COG0642 # Protein_GI_number: 19703418 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 87 805 17 737 737 398 34.0 1e-110 MQIKRDSLLLRIIFYNDIAIIFTSLALALVFSLMVFSSMEQRLADTAREKVFLLYKAYVT EAKDSRETFRMVTNSVFQLAGTGIVENNRLYYDQIAKNISHELMKHSYERYSNSRVTLVN GEGTLLGRNSSERSYQILERSFIQEWENSKYDRKDMFFYKKDNRLFFRFITTFYESDFQN NVFVILDLPMSSYSIENLREFIGMNEEDKILVSVSGHYYYGDLDYETGGELLDSFQITRF APEGFEYFFNQKEINKHAYYMAFYKIRDLDSKYIASLGVAISKEKFLTTKYMVSALMIFI VSILIVISTTVCTKLFAKLLEPLTAILDAVYDIGRGNYKINLEEDAVYEIRNLSNAMEKL AKNISLKENQLKLHNDSLEKNLNRIDAIQKILMGVNLEQDFQLGMKGFLSALTSEAGLGY SRAIYLEYDREKNILQAKDFALNSSLVAECLEDKEKLKVFSFQLQEIDRILPLLKVPCDS QNYLGKSLNENRILYENDKAYRFPFGNDLFHSLGISHFIILPLYRSENMKSCILLDYYIR EREITQEEIELLTLLLLNVNIQLKNKEVEDRKLHFERTSTMEKMSVHFMKGREKLFSRIE SLVDKVEKNGYNKKITLEEITRLKRDFHKIKFDHSILEEYSNFSKKHFEMISVEEFMKEL AKYVQGYMDKYEINFSQFISCNGYFYADKSKLFKAFIELLKNSSEAILTRNRLDKKINIV AIEDKKSNQILINIMDNGIGMYPEEVKEINKAFESYQETTAMGLGLSIVSMVIHEHKGSI AVTSKLDEGTDIKIILNIYKGEQHE >gi|224531372|gb|GG658180.1| GENE 204 205470 - 208265 3705 931 aa, chain + ## HITS:1 COG:FN0067 KEGG:ns NR:ns ## COG: FN0067 COG0060 # Protein_GI_number: 19703419 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 931 1 933 933 1422 71.0 0 MSEKDYAETLHLPKTNFQMKGNLPNKEPNYIKKWEDNKIYEKGLAKGKESFILHDGPPYA NGNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELKVMEKLGSKAKDMTAL EIRQLCKEYALKWVDIQREEFIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFK GLKPIYWSPVTETALAEAEIEYHDHTSPSIYVRMKANSDLLEKISLSEEAYVVIWTTTPW TLPANVAISLNPDFDYGVYKTEKGNLILGKDLADTAFAEMGIENPELVKEFKGSTLEMTS YQHPFLDRTGYIILGTHVTADAGTGCVHTAPGHGQEDYVVGCRYNMPIVSPINYKGYLTE EAGPLFAGLFYEKANKAIIDHLTETGFLLKMKEITHSYPHDWRSKTPVIFRATEQWFVKA EGSDLREKALRALDDVEFIPAWGRNRIGSMLETRPDWCISRQRVWGVPIPVFYNEETGEE IFNQDILNHVISFVEKEGSDAWLLHTSEELIGEENLKKYHLEGISLRKETNIMDVWFDSG SSHRAVLETWEGLRWPADLYLEGSDQHRGWFQTSLLTSVGSRGVAPFKKILTHGFVNDGK GEKMSKSKGNVVAPEKIIKQYGADILRLWCASVDYREDVKISDNIVKQMAETYRRVRNTA RYILGNSYGFDPKKDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFA GIDMSAFYLDIIKDRLYTEKEDSIARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHLP ETLRDQESVLLTDWYVMKEEYINEEIAEKWSKIQKVRKDANKLLEKARQGENRIIGNSLD AKVQCYTEDAGLKAFLENNHETLEAALIVSQVEILSEKTENFVAGEEYKELFLQVLHADG EKCDRCWKYSTNLGTKEDHPHLCPRCSSVVE >gi|224531372|gb|GG658180.1| GENE 205 208275 - 208727 646 150 aa, chain + ## HITS:1 COG:FN0068 KEGG:ns NR:ns ## COG: FN0068 COG0597 # Protein_GI_number: 19703420 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Fusobacterium nucleatum # 1 150 14 163 165 155 58.0 2e-38 MIYIILFVMLLVLDQFTKYIVEQSFYLSESIPIIDEVFNFTYVENRGIAFGLFQGRLSII SILTVVAIVAIFIYVLRNKKTLSILEHFGYTLILSGAVGNMIDRLFRGFVVDMLDFRGIW SFVFNLADVWINVGVFLLIVDYLILRRNEK >gi|224531372|gb|GG658180.1| GENE 206 208742 - 209620 1367 292 aa, chain + ## HITS:1 COG:FN0069 KEGG:ns NR:ns ## COG: FN0069 COG0752 # Protein_GI_number: 19703421 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Fusobacterium nucleatum # 1 290 1 290 290 560 90.0 1e-159 MTFQEIIFALQKFWGSHGCVLGNPYDIEKGAGTFNPNTFLMSLGPEPWNVAYVEPSRRPK DGRYGENPNRVYQHHQFQVIMKPSPINIQELYLESLRVLGIEPEKHDIRFVEDDWESPTL GAWGLGWEVWLDGMEVTQFTYFQQVGGLELDIVPVEITYGLERLALYIQNKENVYDLEWT EGIKYGDIRYQFEFENSKYSFELASLEKHFAWFDQFEEEAGKILDEGLVLPAYDYVLKCS HVFNILDSRGAISTTERMAYILRVRNLARRCAEVFVQNRKDLGYPLLKKEAK >gi|224531372|gb|GG658180.1| GENE 207 209624 - 211687 2836 687 aa, chain + ## HITS:1 COG:FN0070 KEGG:ns NR:ns ## COG: FN0070 COG0751 # Protein_GI_number: 19703422 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Fusobacterium nucleatum # 1 685 1 686 686 742 59.0 0 MRLLFEIGMEENPARFLEPALAELKKNFMNKCKAERIAHGEVKMYGTPRRLILCAEEVAE QQEDLNELNIGPTKSIAFLNGEITRAGIGFAKSQGIDPVDLEIIQTDKGEYIAARKSLQG QATKTLLPELLKSLVLELSFPKSMKWSDLKIRFARPIEWFLAMADSEVVEFEIEGMKSSN HSKGHRFFGKEFTVNSVEDYFVKIRENNVIIDIQERKKMIREDILSKIAEDEQVVIEEGL LSEVTNLVEYPYPIVGTFNSDFLEVPQEVLIISMEVHQRYFPILDKNGKLLPKFVVIRNG IEDSDNVRIGNEKVLSARLADARFFYKEDLRNHLENNVEKLKHVVFQKDLGTIYQKIKRT QEICEILLAKLHLEEKRETVLRTAYLAKADLVSNMIGEKEFTKLQGFMGADYALKFGEKE EVSKGIREHYYPRFQGDELPQVVEGILVGIADRLDTLVGCFGVGVIPSGSKDPFALRRAA LGIVNIILNSKLDLSLRELVNASLDTLAKDGVLKRDRAEVEKEVMEFFKQRLINVFSEKM DRDIVAAVLEVQSEDAMDAFTRMQALKAFLTQEGAKDLLDLAKRVGNISKEAKSREVNVT LFQQEEEKELYHYTEKTKMEIESLVSDKNYAGYLAAVLASKEIVTKYFNAVKVMDENVEI QNNRISQLGLLSSLYQKLADLSVLEER >gi|224531372|gb|GG658180.1| GENE 208 211696 - 212250 692 184 aa, chain + ## HITS:1 COG:FN0071 KEGG:ns NR:ns ## COG: FN0071 COG0302 # Protein_GI_number: 19703423 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Fusobacterium nucleatum # 1 182 5 186 187 234 63.0 5e-62 MDEKRIAKAFEEILEAIGENRNREGLEETPIRVAKSYQELFSGIGQDPRKVLQRTFNVKK NDYIIEKQIDFYSMCEHHFLPFFGKIDIAYIPNGKILGFGDLLKLVDILSKRPQIQERLT EEIVTYLYEELRCQGVFVRVKAKHLCMTMRGEKKENTEIITVSSNGVFEMDSQKRFEVLQ LLNS >gi|224531372|gb|GG658180.1| GENE 209 212260 - 213087 615 275 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 1 262 1 261 278 241 45 3e-62 MDKIYIEKLEFRAYHGVFPEEKKLGQKFIVSLELELDTREAALSNNLDKTLHYGLISERV ESLVLEKSYDLLESLAEKIAETLLLEYPVLQGIKVRVDKPQAPIPLSFQTVAIEIYRSWH RVYLSLGSNLGDKKGNLDRAIEEISSLVHTEVIRKSSFLETEPFGYLEQDTFVNACIEIK TLLTAKEVLKACLGIEEKMGRQRLIKWGPRNIDIDILFYDKEIYDEDNLVVPHPWIEERM FVLEPLCEIAPNYIHPILKKTIFMLKRGIEHETTL >gi|224531372|gb|GG658180.1| GENE 210 213071 - 213922 1262 283 aa, chain + ## HITS:1 COG:FN0073 KEGG:ns NR:ns ## COG: FN0073 COG0294 # Protein_GI_number: 19703425 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Fusobacterium nucleatum # 2 273 5 275 277 357 64.0 1e-98 MKLHCRGLELELGKRTYIMGILNVTPDSFSDGGKYNHLDAALQHAQEMIEEGADILDIGG ESTRPGHIQISEEEEIARVVPVIQALRKQFPTILLSIDTYKWRVAEAALKAGVHILNDIW GLQYDKGEMANLAKEYEVPVIIMHNQNTEEYQEDRIQALRKFFEKSFEIAEKANLSREYL ILDPGLGFGKGFQGDVEILGRLSELRDMGPILLGTSKKRFIGTLLEGLPSEERVEGTTAT TVIGIQQGVDIVRVHNVKENKRVAMVADAIYRKDYLCDNITYK >gi|224531372|gb|GG658180.1| GENE 211 213982 - 214293 525 103 aa, chain + ## HITS:1 COG:FN0093 KEGG:ns NR:ns ## COG: FN0093 COG0526 # Protein_GI_number: 19703445 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Fusobacterium nucleatum # 1 103 1 103 103 132 68.0 1e-31 MAIVHVTKENFKQEVLEANQPVVVDFFATWCGPCKSLSPVLEDVVAEDSFKKIVKVDIDA EPELASEYKIMSVPTLLLFKHGEVVEKSVGLIQKDEVKALFSK >gi|224531372|gb|GG658180.1| GENE 212 214333 - 215817 1673 494 aa, chain - ## HITS:1 COG:FN0993 KEGG:ns NR:ns ## COG: FN0993 COG0168 # Protein_GI_number: 19704328 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Fusobacterium nucleatum # 1 479 1 479 483 511 60.0 1e-144 MNNKMIRYVLSNILKLEAVFMIVPLILSIYYQEKTLVSLAHLFTILLLIGTAYLLSKKQP ENVQIFAKEGLFIVAFSWLALSFFGALPFVISREIPSFVDAFFEVVSGFTTTGASILSNV EALSHSLLYWRSFTHFVGGMGVLVLALAILPKNNNQSLHIMKAEVPGPTVGKLVSKMTYN SRILYMIYIFLTLLITLFLYLGGMPLFDSVLHTFGTVGTGGFGIKNTSVAYYHSAYIEYV LAIGMLLSGMNFNLFYALLLRNFKQVLHNEELKYYLSIVAFAVLAICIDNYNQYDNIEQL FRDSLFTVSSIMTTTGFSTINFDTWSVFSKTILLLLMMIGGCAGSTAGGMKVSRFIVLFK TFIYEFKKTYSPNRVFRLKMDGRALSQELIMSIRTYLILYLSLFFLLLLCVAPESPDFIS ACSAVAATFNNIGPGFGMVGPTMNYSHFSNFNKIVLSISMLLGRLEIFPILLIFSPEIFT PFFKKIKSLFQTEK >gi|224531372|gb|GG658180.1| GENE 213 215830 - 217188 1557 452 aa, chain - ## HITS:1 COG:FN0242 KEGG:ns NR:ns ## COG: FN0242 COG0569 # Protein_GI_number: 19703587 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Fusobacterium nucleatum # 1 452 1 451 452 421 55.0 1e-117 MKIIIVGAGKVGELLCNDLSNEGNDITLIEENQKVLDQVLASSDIMGLVGNGANCEILKE ANIEKADIFIAVTQSDEINIISSVMAKKLGAKYTIARVRNTEYSSQIQFMSDSLGIDRML NPESEAAFFILKNLEFPKALNVESFSGNTVNMLEVLIEENSYLDHLKLIDFKNHYFKSIL VCIVKRNQEVHIPTGNFILQAGDRIYVTGIQAELSEFYKSLGHSEEKIKSVAIIGAGRIT YYLTSLLLEQKMNLKIFEINEEKANLLSETYENANVVWGDGTDSTLLEEEQFSSYDACIS LTGIDEENVILSMYANKVGIKKTITKINNSSLFHLLDFSELQTIVTPKKLIADYIIKTVR SFINSENEENIETLYRLAENRVEAIEFKVPEDSDVINIPLKNLNIKDNLLIAYIIRNNQA IFPGGMDIILPEDRVIIVTTEKYLNHVNKILK >gi|224531372|gb|GG658180.1| GENE 214 217569 - 219776 2490 735 aa, chain + ## HITS:1 COG:FN0499 KEGG:ns NR:ns ## COG: FN0499 COG1629 # Protein_GI_number: 19703834 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 7 735 1 743 743 929 68.0 0 MRKMLFLIGALLSISAFAEQTVELGSTSIKGNRKADYTLTPKEYKNTYTITQEKIQERNY KNVEDVLRDAPGVVIQNTAFGPRIDMRGSGEKSLSRVKVLVDGVSINPTEETMASLPINS IPIETVKKIEIIPGGGATLYGSGSVGGVVSITTNSNATKNNFFMDLNYGSFDNRNFGFAG GYNVTDKLYVNYGFNYLNSEDYREHEEKENKIYLLGFDYKINAKNRFRVQTRYSKMKHDG SNWLSQDELKTSRKKAGLNLDLDTTDKSYTFDYEYRPTENLTLAATAYKQQQDRDITTDD IRDIEIVASNRNYTDLKEYMTFYDVKSTLKAKFKEEKHGIKLKGKYEYGNGEVIFGYDYQ DSNNKRNSLVQSETLKTYNDRISDLNLDPTDRKPIVNRVDIDLTKKSHGFYAFNKLELGK KFDFTTGFRTEITEYNGYRKNGPNTMPIISPKTNEIKTNEKMTNYAGEAGMLYKYSDTGR AFVRYERGFVTPFANQLTDKIHDTELKNPGGFFTPPIVNVASLYVANNLKSEITDTIEVG FRDYIFDSLVSASFFATDTTDEITLISSGITNPAVNRWKFRNIGKTRRLGIELEAEQKWG DFEFSQSLTFVDTKVLKTDKESNIYRGDKVPMVPNIKATLGLKYNVTDNLSLIGTYTYLS KRETRELDEKDKVYKHTIKGYGTADLGVLYKVDKYSNFKVGAKNLFGKKYNLRETKLEAL PAPERNYYLEFNVKF >gi|224531372|gb|GG658180.1| GENE 215 219799 - 223626 4588 1275 aa, chain + ## HITS:1 COG:no KEGG:FN0498 NR:ns ## KEGG: FN0498 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 738 1275 1 583 583 389 44.0 1e-106 MKNRLLILCLASLASISYANEGKAYEGPAHYRVIETQEHIVPLERGAYEDLLRVVDEQNR QKGISSNYLKKGRDGRHLGDIDLVPVAQFAGDENDYKVELVSKKSSKLSGYHSVHELLEG KDKKLKEDGTFEKLSYSREGNQKRFYFGNGNVVKDITITGTEKFDEKLRETKKQKNDRYI IEGVYKRPFKDRDQLGISVDDYKKNIEGQSREKALKYIKQKLEERLGTSSKYKFEIKNGE LYAKDSSGKEWKVLLHIEPVSVPEIRYGSTKKEYKDDIFTNIYLYTPTSSSDDKKDSSGR VLYTKDNNIVVEDKFKYLDNVVEFDSKKETIKKEYEKDKKTMSNEEFKKKWVTPFEKGGE FEKALISFTKDLKLASDEKEQVDQRKNAARKSKEKIENDKNWPKDLYSFQLKYMNEKEKE ETFKKYPKASELLKEWFEQNKIYDEADKKSDELSEKISSEIPKKHGFYDGWKPKKEENKW LKGVVANKDLTRKYLGKNVEFRGQGRIEGTVDLGEGNNELTIKEQFTGRYGTNIVLGPKA ALKNIKYVNVAGAIGDSSHSSLSGRTSLTLDIDPSVANEKGHLTQHAFKNSDPNIVFRGL GSDITSDNRNDFYMELMASRIAKNSVVDMGRKLKYQTQDFHNPAKKIDMEIKMISDSIAH TIENKEEKEKENSLIEVKIKDKIKALNEQENAVYQSIHRSGRLDILQPTLTTTNKKTTFN VADDDREEKKKTKLIHMIKTASPEEVIEKVGQFHLSESSKKDAMERIRKIATSENMKKLK EKTEQFKELASSTEYQKLDFLRKSEEVENLNSGETWQALRQEIYDKATIERKIEEVKKVV NAIDQENIQKLAEKYPEIETLKKISSNLESLKETLASIKGKEIDIKSTTIIQSLFSTFNS LGTNMKKQALMTEDSLDNETAHTFESYETGRREYAELKNILFYSSREEEALSELKNVISQ LQERNIYSKLNKVAKNEISTYTNIPFDIDHSLLDKKSVYTRGGFISSRTVQKNFKGNIYT GYGIYEQEYDKGLRLGAIFGGANTDHTETYSRTLRTVATESNIKGVSAYAGAYVNKTLYT PNLEWISGLGLQYGYYTVKRQVKNNYQELMSKGKPQIGAFNTYTGFVYTHSLQNDLILRG KGILSYSLVHQGKVKEKDGLNLDIEAKDYHYVDGELGVSLAKTLYDDSKKSTLSAGISGI FGLSGYDNKALKAKIHNSNSSYDIVGDKVKKDAVKIYLDYNMQLDLGFNYGLEGTYITNN KQSDVKIGLKAGYAF >gi|224531372|gb|GG658180.1| GENE 216 223852 - 225480 1578 542 aa, chain + ## HITS:1 COG:no KEGG:FN1654 NR:ns ## KEGG: FN1654 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 2 540 30 567 571 523 50.0 1e-147 MKQLPIGVSDFRDLIVGNYYFIDKSAFIQEIVRDGAKVKLFTRPRRFGKTLNVSMLKYFF DITNAEENKKLFQGLSIESSPYFKEQGKCPVIYLSLKDIKEANWQDCNRRMRKLLSDLFD EYKYLRDSLDQRDLKNFDAIWMEELNGNYFDALKDLSKYLSRYHQKKVVILLDEYDTPIV SAYENGYYQEAIIFFRTFYSAALKDNLFLELGVMTGILRVAKEGIFSGLNNLAVYSILNE RYSSCFGLTEIEVQEALEYYQLEYNLQEVKKWYDGYCFGNVEIYNPWSIINYISNRKVGA YWVGTSNNVLVYDLLEKSGNDIFEDLQLVFQGESLFKTLDYSFSFQDMTNPNEIWQLLVH SGYLKVQRIDEGEKYAISIPNLEIYSFFEKSFLNRFLGGIDLFQEMISELKRGNIVFFER KLQSILLHSMSYHDISTHEKYYHNLVLGMLLSLTKEYHIHSNQESGYGRYDLILEPKQND KMAYIFEFKVAKTEEDLEKKAEEALQQIAEREYYIELQKRGILHILTLGIAFYGKKLKVK VK >gi|224531372|gb|GG658180.1| GENE 217 225510 - 226175 602 221 aa, chain - ## HITS:1 COG:FN0851 KEGG:ns NR:ns ## COG: FN0851 COG0500 # Protein_GI_number: 19704186 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 1 215 1 218 222 175 43.0 7e-44 MTFEKHFNSYEENAIVQKKVAKHLASFFTNILNPPKTILEIGCGTGIFSRELVSYFPNAS LSLNDIFDTSAFFDNISYEKFIVHNAETMSLDSYDLISSSGCFQWFTDLQTFLEKLSSHT NCLVFSMFLEDNLKEIKDHFQITLAYPSVSETIHTLRKHYSKVEYQEEIFEIDFPTPLAA LRHLQATGVTGIGETNIRKIRSYPHKKLTYRVGYFKAERAN >gi|224531372|gb|GG658180.1| GENE 218 226165 - 226767 552 200 aa, chain - ## HITS:1 COG:no KEGG:FN0850 NR:ns ## KEGG: FN0850 # Name: not_defined # Def: putative cytoplasmic protein # Organism: F.nucleatum # Pathway: not_defined # 1 193 1 194 196 117 38.0 4e-25 MRWIFFFNGWGMTEDAFPHLSLEQVEVINYPYDIQEIKDLLEHHKNDTLYAVAWSFGAYY FSKLPKEIQNHFHKKIAINGLPETLGSYGILPKMCKFTLENLTPESLRSFYKNMDFHGNI SKKFADIQEELAFFYENYQKPENPFDFAWIGENDRIFSAKKLIRYYEKERVPYQCFFGGH YPFHFFQNFFELLGDTKNDL >gi|224531372|gb|GG658180.1| GENE 219 226745 - 227866 1289 373 aa, chain - ## HITS:1 COG:FN0849 KEGG:ns NR:ns ## COG: FN0849 COG0156 # Protein_GI_number: 19704184 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Fusobacterium nucleatum # 1 369 5 375 381 389 57.0 1e-108 MKLTEMQEELNQFEQEGRLRKVETKPANMTNFSSNDYLSLAGQIPLRQKFYEEYPCLALS SSSSRLIDGSYSIVMDLEKKLEEIYGKSALCFNSGFDANSSVIETIFPKKSLILTDRLNH ASIYDGIIASNSKFLRYSHLDMKALEKLLKKYQNDYEDIVIISESIYSMDGDCADLEALV SLKKQYNAQLMIDEAHSYGVYGYGIAYEKKLVSEIDYLILPLGKGGASMGAFVLCDEVAK KYLINRSRKFIYSTALPPITHAWNYYVLTHMQDFQEEQEALFRKEKLLYQLLQEEKIATT SSTHIVSIVIGNNEKANALSKALFQKGFLIQAIKEPTVPKNMARLRLSLTSAIPEEEIKR FVKELRHEMDILF >gi|224531372|gb|GG658180.1| GENE 220 227968 - 228924 1029 318 aa, chain - ## HITS:1 COG:FN0662 KEGG:ns NR:ns ## COG: FN0662 COG0010 # Protein_GI_number: 19703997 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Fusobacterium nucleatum # 1 314 1 314 318 475 70.0 1e-134 MYWTGRCDGEEADVLRIHQVVKKMTLDELMEQKVEEKKICFVSFNSEEGIRRNFGRLGAA EGWIHLKKAFANFPVFDPDIHFYDLKTPIDVVNGDLEAAQYELSMTVSMLKNKNFLVVCL GGGHDIAYGTYNGILKYAQSKELDPKIGIISFDAHFDMRSYEKGASSGTMFLQIADDCER EGRVFDYNVIGIQKFSNTKRLFDTAKHFGVNYYLAEDISKLNEFNIDPIIKRNDHIHLTL CTDVFHITCAPGVSAPQSFGIMPDEAMRLLNIISSHTKDLTIDVAEISPKFDFDDRTSRL MANLIYQTILNHFEVSFK >gi|224531372|gb|GG658180.1| GENE 221 228941 - 229372 434 143 aa, chain - ## HITS:1 COG:no KEGG:CPF_2500 NR:ns ## KEGG: CPF_2500 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 25 142 72 189 190 66 28.0 4e-10 MKKDLAALLQNNPEFDLSICKILNDKQLESLENNIVLFLHGKTLDMGTKDLSILLLKELL CSLSQQELLPKTIILSQKTVLCNQRESEFLHFFRLLEQKNIEILTCKTSAEYYKINKNIP IGHFASMEEIIEKLFHASKIIQW >gi|224531372|gb|GG658180.1| GENE 222 229369 - 231348 1690 659 aa, chain - ## HITS:1 COG:FN0871_1 KEGG:ns NR:ns ## COG: FN0871_1 COG0337 # Protein_GI_number: 19704206 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Fusobacterium nucleatum # 15 347 8 347 350 305 45.0 2e-82 MKEILIHTKTDRYPILIGSNFLTKLHSFTQKYDKILFLTNDTLFSHYSNLYKEKIASSKT EYYVLPDGEQYKNLDFIQKIYNVMIEKHFSRKSCILCFGGGVVCDMGGFVAASFMRGIDF IQIPTSLLAQVDASIGGKVAVNHPFGKNLIGFFYSPKAVLIDVSLLHSLHEVQFQSGMSE VIKHSILCPNDAYSDFLVKNQKEIQEKEEATLISLIEQSCQIKKYYVEEDMQEKGIRAFL NFGHTYAHALENLYHYEHISHGEAVAKGCLLDLFTSYQKGLLPLEYFEKIKNLFDDYSID STPVLFPFQTLWEAMEQDKKNAFSKINTVYLKKQENKKEFLLQELDKQATQGYLSQENHY ETKAVIDIGTNSCRLYIAEWSPKEHKIIKHLYQEVQIVQLGEKVNETKFLQESAIKRTLD CLIHYQNIIKQYACSTIYCFATSATRDAHNREYFIQKVLKNIGIQIHCIPGETEAEYNFR GVSLAIDGQILIVDIGGGSTEFTLGNHGEILFSKSLNIGAVRATELFFQEENYSFKNIQN CKHWILEQLKEIETIRQKDFVLIGVAGTATTQVSVAKKMKNYTRELVHLSEISNSQLEQN LSLFLSKSLEERKKIIGLEAKRANVIIAGTIILQTIFQYLGKETMTISEFDNLMGAMIL >gi|224531372|gb|GG658180.1| GENE 223 231448 - 231792 530 114 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452625|ref|ZP_05617924.1| ## NR: gi|257452625|ref|ZP_05617924.1| hypothetical protein F3_06109 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_03461 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 114 1 114 114 204 100.0 1e-51 MKKILAFFLLLSSMSFAVEIYPETYAMQKMIPQLEKGKRYVGSSSYEAMEQIVAVPMNQN IQKALGTGDTSIYFIDSNGNTVKAGPEDYIVAPKSLSRIYVLSKQQLQENYRGQ >gi|224531372|gb|GG658180.1| GENE 224 231795 - 232979 1285 394 aa, chain + ## HITS:1 COG:FN1154 KEGG:ns NR:ns ## COG: FN1154 COG1295 # Protein_GI_number: 19704489 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 17 394 2 395 396 275 42.0 1e-73 MTREDFHEIYSGVGTSIKHALWKYKEANSNLWVTSLCYYTVLSMIPIFAILFSIGTWLGL GEYLLKQIDNHSPIKGEAIQLLLTFTDNLLTNARSGVLAGLGFLFLIWSLISMFSIVEKA FNDIWDIDATRSFVRKISDYLTFFILLPTLILVSNASSLLIQNDFLSKILPYFSVLLFFM ALFMVMPNTEVKWLPAFVASFFTSVMFSIFQYAFIYLQVLINAYNMIYGSFSVIFIFLIW LRIAWFLIILGAHLSYLLQNRDINLYCDSLSIDEINFQSKFSLAVHLLAVMVRRYQKEES LVTRAELTARFHNVIAIDGVLRILKKGNFILEGKNEKQEKVYSLAKNIEKTRLEEVYFVI SSYGKMIEDIEYEIISAKRLQTRLCELGGYEEKE >gi|224531372|gb|GG658180.1| GENE 225 233039 - 234940 2529 633 aa, chain + ## HITS:1 COG:FN1155 KEGG:ns NR:ns ## COG: FN1155 COG0768 # Protein_GI_number: 19704490 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Fusobacterium nucleatum # 1 633 62 711 711 630 51.0 1e-180 MLIGLRLCQVQIAQKGKYSSSILKQVQGKDEEIGERGNILDRNGKQLAFNKRQYMVIIDP SKIHINEDQFLKNLQEIADKKILDLDATFFEKLEKEFEANKKYKVIAKKIDDVTREKIKE CLSKIPEERKYLFFKKEIEREYYRKDIYETLVGMVRFTKNSKEKKQGVFGLESRYERYLA GKTLSRDKYYSRDKKKVLPTSMEWMYTNLNGNNIYLTIDNEINYILNDEIKAQYDALNAE EAYGVIMDPKNGKILGISTYTRNPKDLRNQVFQNQYEPGSIFKPIIVASALDEGLIQKNS TFNVGNGSIVKYRHTIRESSRSTTGILTTTEVIKKSSNVGMVLIGDYFTEEQFEKSLRKF GLYEKTGVDFPNEIKPYTTSHEKWDKLKKSNMAFGQGITVTPIQMITAFSAVVNGGKLFR PYLVEKVVDDDGVVLRRNVPKVVRQVIKPEVSDMLVGMLEETVANGTGSRAKVEGYRVGG KTGTAQLSSNGRYLAHQYLASFVGFFPVENPQYVILVMILKPQAESVFGRYGGTASAPVV GNIIRRISKIKNVSSQEVSKIISSNKEIVDEKQDLVLGESMPDLKGLSPKEVMNLFQTTN YDIHIVGTGLVVRQEPAAGKSLEDVDKIEVILE >gi|224531372|gb|GG658180.1| GENE 226 234937 - 237213 1947 758 aa, chain + ## HITS:1 COG:FN1156 KEGG:ns NR:ns ## COG: FN1156 COG1198 # Protein_GI_number: 19704491 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Fusobacterium nucleatum # 1 758 1 766 766 707 51.0 0 MIYYQLYLEKNKGLYTYMDEKEEYHIGESVFVSFRNRKQVAYIIAKDSRKEFSFKVLPIL GKTEFPNLPPVLVEVARWMVRYYVSSYEAVLKNIIPKDIKIKKKIFYSLSSPMILDIPKE LLDFFREYSSVSKVTLRKYVSLEEIKQSITEQEIIEVSKNRYIWNETKEKRGLLGSYFFQ KGQMPALKLIEKFSKVEVEEFLKKHYLEEQNRFESGISSVGDFSSSLSFRDVNLNEEQKK AVDRITKGEHFFYLLKGVTGSGKTEVYLSLIRKAFQEGKGSIFLVPEISLTPQMIERFQD EFQENIAILHSKLTSKERAEEWLQLYQGKKRVVLGVRSAIFAPVQNLQYIIIDEEHESSY KQDNNPRYHAKQVALKRAMLEKAKLVLGSATPSIESYYYAKKGLYQLIELNERYNQAKMP EIELVDMKEEKDLFFSEKLLEEIRNTLLRKEQVLLLLNRKGYSTYIQCQDCGHVEECDHC SIKMSYYASKGIYKCNYCGKVVKYTGRCNACGSEHLIHSGKGIERVEEELKHYFPDISIL RVDGDQKGNQFFERAYHDFLDEKYQVMIGTQLIAKGLHFPNVTLVGVINADMILNFPDFR AGEKTYQLLAQVAGRAGRAEKNGKVIIQTYQSEHYAIDKVREHDYEGFYEKELEARDFLE YPPFAKMILLGLSSRDEEYLKIKSEEIFKRIPQEQVDLYGPIPCLVYRVKDRYRYQIFIK GNREKIEEYKKLLRKVLIEYQQDENIRISIDAEPLNMI >gi|224531372|gb|GG658180.1| GENE 227 237226 - 237747 679 173 aa, chain + ## HITS:1 COG:FN1157 KEGG:ns NR:ns ## COG: FN1157 COG0242 # Protein_GI_number: 19704492 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Fusobacterium nucleatum # 1 173 1 172 174 190 58.0 1e-48 MIYEIRKYGDPVLRKVAEKVEDINDEIREILSNMLETMYATDGVGLAAPQVGISLRMFVC DVGTPEESQVKKIINPIITPLTEENISVEEGCLSVPGIYRKVDRIAKIKISYQNEMGEKI EEILEGFPAIVVQHEYDHLEATLFVDRISPMAKRMIAKKLQALKKETMRDAKE >gi|224531372|gb|GG658180.1| GENE 228 237734 - 238042 275 102 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452630|ref|ZP_05617929.1| ## NR: gi|257452630|ref|ZP_05617929.1| hypothetical protein F3_06134 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_03486 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 102 1 102 102 144 100.0 3e-33 MPKSKQKFSKGYLFLLLIFAYSMFGVIPQILKSQTKIAKIKEEIEYLEGKNQKELQEIEK YTKNIEELDNDYERERIARNRLQMIKPDEVIYRLNQKNQEEQ >gi|224531372|gb|GG658180.1| GENE 229 238039 - 239097 1780 352 aa, chain + ## HITS:1 COG:FN1159 KEGG:ns NR:ns ## COG: FN1159 COG1494 # Protein_GI_number: 19704494 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Fusobacterium nucleatum # 1 352 1 346 346 536 82.0 1e-152 MKRELALEFARVTEAAALAAHKWVGRGDKEAADQAAVDAMRTMLNRLAIDGEIVIGEGEI DEAPMLYIGEKVGRAYHEEEAKDELEEGEVPYYTPVDIAVDPVEGTRMTAQGQSNAVTVL AVAKKGSFLKAPDMYMEKLIVGPEAKGKIDLERPLMENIENVAKALGKELHEMMVVVLDK PRHTQIIKDLQKLGIKVYALPDGDVAGSILTCLVDSDVDMLYGIGGAPEGVISAAVIRAL GGDMQARLKLRNEVKGVSLENDKISNFEKSRCEEMGLKVGEILRMDDLVKDDEVIFSATG ITGGDLLTGIYRRGMIAKTQTLVVRGSSKTVRYINSVHNLEYKDPKILHLVK >gi|224531372|gb|GG658180.1| GENE 230 239111 - 239602 740 163 aa, chain + ## HITS:1 COG:no KEGG:FN0932 NR:ns ## KEGG: FN0932 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 163 7 167 167 101 38.0 1e-20 MIFYEDFIKKIEEAQYEELQLEEIENFGLEKTKKMGGYGIAIPLMLIAAYEIFVAIFMKQ YYLILIALVLFYFGLRQCRNMWAYKVVVNTKEKHFFFQKLDLDLHKVEKIQLREAKIGKK VTVVLDFITIEKKQVIIPMYMTNQLRLVRVLQNLVGSKFSIKK >gi|224531372|gb|GG658180.1| GENE 231 240237 - 241574 1443 445 aa, chain + ## HITS:1 COG:FN1101 KEGG:ns NR:ns ## COG: FN1101 COG1373 # Protein_GI_number: 19704436 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 1 443 23 465 470 690 76.0 0 MKRFIMDDLVKWKDSKYRKPLILKGVRQVGKTWILKEFGRLYYDNVAYFNFDENMEYREF FTTTKDTKRILQNLMLISGEKIEPNSTLIIFDEIQDCPEVINALKYFYENIPEYHIVCAG SLLGIALAKPSSFPVGKIDFLNMVPMNFSEFLIANGDENLKNYLDSIEEIEKIPEAFYNP LYEKLKMYYITGGMPEPIYMWSKERDMELMIRSLNNIIEAYERDFAKHPNTKEFPKISMI WKSLPSQLSRENKKFIYKVVKEGARAREYEDALQWLVNANLVSKVYRISAPRIPLSAYDD LSAFKIYMADVGILNRLSLLSPKAFGEGSRLFTEFKGALTETFILQSLIPQFEVSPRYWT DNIYEVDFVIQHENDVFPIEVKAEKNTKSKSLLKFKEKYSENVKLRVRFSFDNLILDGDL LNIPLFMVDYSKKLITMALRKNRNF >gi|224531372|gb|GG658180.1| GENE 232 241702 - 242259 227 185 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229236145|ref|ZP_04360568.1| acetyltransferase, ribosomal protein N-acetylase [Chitinophaga pinensis DSM 2588] # 12 181 7 177 181 92 33 3e-17 MEKIQEIFLGKNQEIYSMKVATEEDAAALLEHSKKVRGETDFLLTYPEEFTMTVDEEKEM LNTFRKTKNQFILCVYYKDCIIASAGIMPVMEKKKVLHRASFGVCVEKEHWQQGIGKKLM ENSVLLAFQAGYEQIELGVFAVNIRAKEMYEKFGFREWGKIPSAYRLKNGSYRDEILMGL RKEYL >gi|224531372|gb|GG658180.1| GENE 233 242256 - 242993 993 245 aa, chain + ## HITS:1 COG:FN0505 KEGG:ns NR:ns ## COG: FN0505 COG2071 # Protein_GI_number: 19703840 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Fusobacterium nucleatum # 2 243 4 243 243 214 46.0 1e-55 MKALIGITGSIITCGNDEIFATYERAYVNDDYVSAVEKAGGIPIILPIVEEEENIKEFVS RVDAIVLSGGYDIDPSYWGEEIGRKYERIYPRRDHYEMLVIKYAKELKKPVLGICRGHQM INVAFGGSLYQDLSEIPGSYIQHVQQAKYYEATHGIEIEEGSFISKSMGVKNRVNSYHHL AIKDLGNSLRIVGRAPDGVVEAIEYITEEQFFIGVQFHPEMMHRHHEFALHLFQDFIQEV ERRKK >gi|224531372|gb|GG658180.1| GENE 234 243037 - 243552 682 171 aa, chain - ## HITS:1 COG:FN1822 KEGG:ns NR:ns ## COG: FN1822 COG0716 # Protein_GI_number: 19705127 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 168 1 168 169 185 52.0 4e-47 MKTVIIYSSLTGNTKKVCEVAYEHLQDEKQLIKVEDKDTVDWSTVENIIIGYWVDKGTAD AKTRKFLSKLKDKNLYFIGTLGESPTSFHGQKCIKNVTKLCEKDNQFKGGVLVRGKVSDD LKKKMDKFPLNIVHKFVPNMKQIVLDAEGHPNEEDFQQVIHFVEETVNPNL >gi|224531372|gb|GG658180.1| GENE 235 243706 - 244086 428 126 aa, chain + ## HITS:1 COG:FN2099 KEGG:ns NR:ns ## COG: FN2099 COG2832 # Protein_GI_number: 19705389 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 7 126 4 123 125 106 47.0 1e-23 MDVIVIVKKNILLGIAWVSLVLGGIGIFLPLLPTTPFILLSAFCFQKSSERFHQWILNSP IFGKYIRDYQEQKGITLKNKIIAISFMAIGMLFSAYKVPQIHMRIFLGITFVAVSYHILK LKTLKK >gi|224531372|gb|GG658180.1| GENE 236 244114 - 244722 816 202 aa, chain + ## HITS:1 COG:FN1312 KEGG:ns NR:ns ## COG: FN1312 COG0811 # Protein_GI_number: 19704647 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Fusobacterium nucleatum # 1 202 1 202 202 226 55.0 3e-59 MAYYFKVGGPILWVLFFMSMGALAIILEKTVFFTTKEKKVNANFKKDINDLISAGKVEEA IQLCETQKGSVAGSIKTFLKRAKKGQDVQDYESIIKEIMLESMSPLDRGLSSLEAIGSLA PMCGLLGTVTGMIKAFINISKMGAGDPTIVADGISEALVTTAAGLYVAIPVIAAYNIFSK IAARREDEVDKIVANIINIFRR >gi|224531372|gb|GG658180.1| GENE 237 244725 - 245111 593 128 aa, chain + ## HITS:1 COG:FN1311 KEGG:ns NR:ns ## COG: FN1311 COG0848 # Protein_GI_number: 19704646 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Fusobacterium nucleatum # 29 128 1 100 100 117 55.0 7e-27 MGRKNKRGALKPDLTPLIDVIFLLIIFFMISTTFNNYGTIPIELPSSTVESKKENKAVEI IVDKDGRFYVSADGKNQEVTLEDIPNHLQGVEEVTVSADRNMKYQTVMDVMTKVKEQNIA NMGLTFYE >gi|224531372|gb|GG658180.1| GENE 238 245124 - 245861 816 245 aa, chain + ## HITS:1 COG:FN1310 KEGG:ns NR:ns ## COG: FN1310 COG0810 # Protein_GI_number: 19704645 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Fusobacterium nucleatum # 32 245 11 242 242 171 49.0 1e-42 MKKYLVLSFCIHILCFIGFYHHEMHKGEEKLPLNQVISVSFVVENPPPSDNPGSPNVADK ILEKKENSTNEKPKEQPKKEKPKKEEQVKEKTFDSKMATKDAKEVKKEESAAVASDSHEK ESSDSGKASGSDNPFYGSNFQANGDGSYTALSSEGINYQILNEVEPDYPSQAESIGYDQR VSVKVKFLVGLKGNVENIQIIKSHKKLGFDDEVMKAIKKWRFKPIYYAGKNIKVYFVKEF HFNPQ >gi|224531372|gb|GG658180.1| GENE 239 245890 - 246348 560 152 aa, chain + ## HITS:1 COG:no KEGG:Smon_1033 NR:ns ## KEGG: Smon_1033 # Name: not_defined # Def: hypothetical protein # Organism: S.moniliformis # Pathway: not_defined # 1 152 1 148 148 96 36.0 3e-19 MKKLWILFFLFPNLVFAAREDILGKWISTKYKDGNQIIIEVIEKEDGKFYGKMIDQTVPF YQEGEFQGKEKMDLKNPDPSLKHRKLVGVEMLKSIAYQEEKDRYDGGTVYIPGMGKTLYA SVQVEKDSMKMKGSFDKAGILGKTQLWHRYEK >gi|224531372|gb|GG658180.1| GENE 240 246469 - 247017 597 182 aa, chain + ## HITS:1 COG:FN1823 KEGG:ns NR:ns ## COG: FN1823 COG1309 # Protein_GI_number: 19705128 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 175 1 154 156 100 38.0 2e-21 MPRKSVYTREMVLEAAVEVFKNEGYEKITVKNIAKQLGCSIAPVYAAYTSMEDLKRDVVI KVEDTLVSCVDEISNSCHVVEEDVSMTQEQRDLFERMFSMVDPENEAVKQKFENLVEEAL QNSENPDQSRMSLFNVFMKAISIMSETKHKKFSKSEILSLIARHKNYILTLKKKKGYGNR RK >gi|224531372|gb|GG658180.1| GENE 241 247130 - 248098 1418 322 aa, chain + ## HITS:1 COG:PAB1835 KEGG:ns NR:ns ## COG: PAB1835 COG4143 # Protein_GI_number: 14521007 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type thiamine transport system, periplasmic component # Organism: Pyrococcus abyssi # 19 315 34 336 352 158 35.0 2e-38 MKKIILGSLLLLSASAFAEEIVVYGPSTSKWIGKKYAPIFEKVTGDTIKYVSIDGVVQRL TLEKVNPKADIVVGLTPVDIEVAKKHNVIQKYKPKNIGMIKKDIKFDKEFYATPYDYGML AINYDKTKIKNPPKTLAELGKMKKQLLIENPNTSNTGAEILQWSLALYGKNWKKFWTTIQ PAVYNVEPGWEEAFAKFTAGEAPMMLGYATSDMWFAQDDTQKEKYASFYVEDGNYQYIES AALVKKKEVKEGAKKFMEAVLGEEFQNMTAAKNYMFPVTSVPLGKEFDAVPRTDKKVQFV PNKEVVEHLSKYKKEAIQILKK >gi|224531372|gb|GG658180.1| GENE 242 248293 - 249198 1023 301 aa, chain + ## HITS:1 COG:PAB1498 KEGG:ns NR:ns ## COG: PAB1498 COG0540 # Protein_GI_number: 14521526 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Pyrococcus abyssi # 2 299 6 306 308 320 52.0 2e-87 MRNFISIQDLSKQEILDLLALAKKLKEKPEPNLLQGKIVATLFFEPSTRTRLSFTSASYR IGANVLGFDSIQGTSVMKGESFEDTIRMVSSYSDVIVIRHPKDGTAQKAADISSVPVINA GDGKNEHPSQTLLDLYTIQEELGSLENKKIAFVGDLKYGRTVHSLTRAMKHFHAKFYFVA PDLIQMPKHLLEELEEAGLEYSLHNNYEDILKEVDILYMTRIQKERFEDPKDFEKVESSY RIEKEDIVGKCQEHMIILHPLPRVDEIAVSVDECKHALYFKQAANGVPVREAMIALAVGK K >gi|224531372|gb|GG658180.1| GENE 243 249208 - 250008 1035 266 aa, chain + ## HITS:1 COG:CAC2651 KEGG:ns NR:ns ## COG: CAC2651 COG0543 # Protein_GI_number: 15895909 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Clostridium acetobutylicum # 33 255 32 246 246 147 37.0 2e-35 MYLRDCIVKKNTCVASCYYRMVVEIPEELLVSKPGQFFMLKSLQDAFSLRRPISIHQVNK QDRTMEFYYEVKGRGTESLADFQEGEKISLQGPLGHGFSVVKDKKVIVIGGGMGIAPMKY LLDDLKENNEVTFIAGGRNQDAIEILDFFSFQKLRAYITTDDGSVGMKGNVVTKLKDLLE QDSYDQIYVCGPHGMMIAAAETAQEKGVACEISLENRMACGVKACVGCSIQTVDGMRKVC HDGPVFDSRKIVNYDPKEKASICCGN >gi|224531372|gb|GG658180.1| GENE 244 250018 - 250938 1402 306 aa, chain + ## HITS:1 COG:BH2534 KEGG:ns NR:ns ## COG: BH2534 COG0167 # Protein_GI_number: 15615097 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Bacillus halodurans # 1 301 1 299 305 291 49.0 9e-79 MSCLKTEFLGVSMKNPLVTSSGCFGFGKEYQDYFDPNQLGGIVLKGITLEARDGNYGVRI AETPGGMLNCVGLENPGIDVFEQEIIPNLRKEGITTNLIVNINGKTMEDYIEIAKRVDNI DEIAIVELNISCPNVKDGGMAFGANPEVAGAVTREVRKVTKKPLVVKLSPNVTDIAKIAK IVEENGADAVSLINTVLGMAIDVKTKKPVLGNTFGGMSGGAVKPIALRMIYQVYEAVKIP IVGMGGILNGTDALEFLMAGASILSIGTGFFINPMVSLEIEKTLRDYCEQEGLKNIQEIV GIAHRR >gi|224531372|gb|GG658180.1| GENE 245 250941 - 251657 1001 238 aa, chain + ## HITS:1 COG:alr2983 KEGG:ns NR:ns ## COG: alr2983 COG0284 # Protein_GI_number: 17230475 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Nostoc sp. PCC 7120 # 5 231 4 234 238 196 45.0 2e-50 MDVREKIIIALDFPTEEKAKACVESLGEEAVFYKVGLELFLNSQGKILEYLREKGKKIFL DLKFHDIPNTTAMASVFAAKKDVVMFNVHASGGKKMMQKVIEETKKINEAASVIAVTILT SFSEEEIQNVFQSKLSLKELAIHFASLAKEAGLSGVVCSPWEAADIKKVCGESFQTVCPG VRPKWSATNDQERIMTPKEAVQHGCDYLVIGRPVTKHENPKEAMRMIVKEVEEGLDLC >gi|224531372|gb|GG658180.1| GENE 246 251651 - 252868 1439 405 aa, chain + ## HITS:1 COG:all2303 KEGG:ns NR:ns ## COG: all2303 COG0044 # Protein_GI_number: 17229795 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Nostoc sp. PCC 7120 # 1 402 7 436 439 249 35.0 5e-66 MLVKNAKIIMGTEEVLVDILIENGRFVKFGKDFVENSQEEVLDANFHYVLPGIIDAHTHM RTPGFTQKEDNISGSKAAIRGGVTTFFDMPNTNPATVTLEALEEKRNIYKGNSYSDYAFY FGGTRFDNHEEVEKAIDETVATKIFLNVSTGDMLVEEDAILENIFKASKRVAVHAEEEMV SKAIQLARKTKKPLYLCHISLEKELEYIREAKEMGVEVYGEVTPHHLFLSEEDRESTEEN KLFLRTKPELKTKQDNEALWKALQYGILDTVGTDHAPHLLEEKKAKLTFGMPSVEHSLEM MWKGVQEGKLSIPRLQEVMSENPAKIFGLKKKGKIAVGYDADFVIIDDGDHSEIRQEEII SKAAWSPYIGQKRGCKVLTTVLRGNIVYHEGKFGKKIGKEILKHE >gi|224531372|gb|GG658180.1| GENE 247 252861 - 253484 959 207 aa, chain + ## HITS:1 COG:SP0702 KEGG:ns NR:ns ## COG: SP0702 COG0461 # Protein_GI_number: 15900601 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 205 1 207 210 182 48.0 4e-46 MNRKEAIAQVLLSTGAVKLNVKEPFTFVSGIKSPIYCDNRQMIAYPEEREVIIQGFQEAL EGKEYDILAGTATAGIPWAAFLAHSLKKPMSYIRGEKKNHGAGKQIEGASVEGKKVIVIE DLISTGGSSIKAVEAAYAEGASSVEVVSIFSYEFPKAYQQFGDKKIPWQSLSNFEVLIHK AEEMNYVTEEERKIAADWNKNPDTWGK >gi|224531372|gb|GG658180.1| GENE 248 253600 - 254280 696 226 aa, chain - ## HITS:1 COG:FN1305 KEGG:ns NR:ns ## COG: FN1305 COG1917 # Protein_GI_number: 19704640 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Fusobacterium nucleatum # 117 226 2 111 111 121 53.0 1e-27 MIEIKKIPRGSSFFLKEEIKVRNFQVSSKILVQSSHARMTLVSMGKGEEISAETMPYSRC FQLLKGKVFLQLNQEKLDMEIDHFLLLGENSFYSIHAEEDSIFLEIEYDRGGNFMSEVQT IKHITRGTTFALKEEISYEAGQIISKNLVTNNAMVMTLMSFDQGESLAAHKAPGDALVSL LDGEAKFWIDGKENVVKAGESILLPGNVSHAVEAIKAFKMLLIIVK >gi|224531372|gb|GG658180.1| GENE 249 254467 - 254565 114 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNVACPRYMLEEGLKRMEQAIKYWRKNIRVGG >gi|224531372|gb|GG658180.1| GENE 250 254569 - 255885 2105 438 aa, chain + ## HITS:1 COG:FN0624 KEGG:ns NR:ns ## COG: FN0624 COG1757 # Protein_GI_number: 19703959 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 1 438 5 442 444 615 83.0 1e-176 MKEERKEKQYGVIAFLPLFVFLALYIGSGIIFNLLGVEGAFKKFPRHVALLIGIVVAMLM NRGMKLDKKIEIFSENAGNSGVMLVGMIYLLAGGFQGAARAMGGVESVVNLGITFIPSIA LVPGVFLISCFISLAIGTSMGTVAAMAPIAIGVAEAAQLNIPLTAAAVIGGAYFGDNLSI ISDTTISAAKGVGSEMKDKFKMNFLIALPAAIFAAIMYGIMGGEGNIVGEHSFHILRVLP YLVVLMTALTGFNVSAVLVLGIAMTGVIGFFEGTIDFFTWIGAIGEGMSDTFSITIVAIL ISGLIGLIKYYGGIDWIVNILSSKMSDRKSAEYGIGLLSGILSAALVNNTIAIIISAPLA KEIGKKYRIAPKRLASLIDIFACAFIALTPYDGGMLMITALVDVSPLEVLQYSFYMFALI IVTCITIQFGLLRTEEER >gi|224531372|gb|GG658180.1| GENE 251 255930 - 257078 1587 382 aa, chain - ## HITS:1 COG:FN0355 KEGG:ns NR:ns ## COG: FN0355 COG0192 # Protein_GI_number: 19703697 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Fusobacterium nucleatum # 1 381 1 381 383 647 80.0 0 MKKFNYFTSEFVSPGHPDKVSDQISDAVLDACLTEDPNARVACEVFCTTGQVIVGGEITT TTYIDVQDIVRKKIEEIGYRDGMGFDANCGVLSAIHAQSPDIAMGVDIGGAGDQGIMFGG AVKETPELMPLAIVLAREILVRLTKMTRSKEIAWARPDAKSQVTLAYDEEGNIDHVETVV VSVQHNPEVSNEEIRKTIIEKVIEPVLEQYHLSKEEITYHINPTGRFVIGGPHGDTGLTG RKIIVDTYGGYFRHGGGAFSGKDPSKVDRSAAYAARWVAKNIVAADFADKCEIQLSYAIG VAEPTSIKIDTFGTSKVSEEKLEEAVKKTFDLTPRGIEKSLELRSGTFKYQDLAAFGHIG RTDIDVPWERCNKVEDLKKAMM >gi|224531372|gb|GG658180.1| GENE 252 257279 - 258163 1339 294 aa, chain - ## HITS:1 COG:FN1266 KEGG:ns NR:ns ## COG: FN1266 COG1210 # Protein_GI_number: 19704601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Fusobacterium nucleatum # 1 290 8 296 301 415 73.0 1e-116 MKKITKAVIPAAGLGTRVLPATKAQPKEMLTIVDKPSLQYIVEELVASGIQDIIIVTGRN KNSIEDHFDFSYELEDTLKKDKKTELLEKVSHISDMANIFYVRQNFPKGLGHAILKAKPF IQEEEPFIIALGDDIIYNPEYPVAKQLIDCYEKYGHSIVACQEVKKEEVSKYGIVNPGEI YDDITCQIENFIEKPSLEEAPSTLASLGRYCLSGKIFHYLEEAKPGKNGEIQLTDSILSM IQDGEKVLAYSFTGERYDIGNKFGLLKANIEYGLRHEEISEKLKDYLSSLLTKE >gi|224531372|gb|GG658180.1| GENE 253 258193 - 260115 2384 640 aa, chain - ## HITS:1 COG:FN1268_1 KEGG:ns NR:ns ## COG: FN1268_1 COG0143 # Protein_GI_number: 19704603 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 3 509 4 510 526 841 75.0 0 MNNFYVTTPIYYVNGDPHVGSAYTTIAADVMSRYQKLAGKNVYFLTGTDEHGQKVEQTAK EKGFTPQAWTDKMAPAFTEMWKALNIHYSDFIRTTEQRHKDSVKKILKTVYEKGDIYKGE YEGQYCISCETFFPENQIVEAGHCPDCGKKLSTVKEESYFFRMSKYQDALLKHIEEHPDF ILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITATGYEN DSEKFDTYWNNARVCHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMSK SKGNVVNPYDEIKKYGVDAFRYYLLREANFGSDGDYSTKGVVGRVNSDLANDLGNLLNRT LGMYHKYFQGSIVASGNYEEIENSVHQMWEDTLTQVDKHMYYYEYSRALECIWKFISRMN KYIDETMPWALAKEETQKTRLATVMNTLVESLYKIAVLVSPVIPEAAQKIWSQLGVEKDI QEARLSSLHTWNTFEEKHTLGKATPIFPRIEIVEEEPKLDPMQVNPDLVVENPIDIDTFK KTKIQVVEILEVSKVKGADKLLKFKVSLGDHVRQILSAIAEYYPNYQDLVGSKILAVTNL KPRKMRGEISQGMLLTTEDEQGVCQVIQIPKNTPAGTEVE >gi|224531372|gb|GG658180.1| GENE 254 260108 - 260419 541 103 aa, chain - ## HITS:1 COG:FN1269 KEGG:ns NR:ns ## COG: FN1269 COG2121 # Protein_GI_number: 19704604 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 94 115 208 209 77 51.0 5e-15 MGTPVDGPKGPPYKVKHGLLYLAQKSGIPIVPMGGAFSKKWVFSKTWDHFQVPKPFSKIF YVLGNPIYLNKDSNLEEIALFLEQEINNLNEKAERLVREGNYE >gi|224531372|gb|GG658180.1| GENE 255 260531 - 260776 266 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257452654|ref|ZP_05617953.1| ## NR: gi|257452654|ref|ZP_05617953.1| lipoprotein [Fusobacterium sp. 3_1_5R] lipoprotein [Fusobacterium sp. 3_1_5R] lipoprotein [Fusobacterium sp. 3_1_5R] # 1 78 1 78 222 155 96.0 9e-37 MEKTESSKKYRFYGLCLYYFIHLLNYTFSYIRIENTGEEKVNENIRPYIFCFWHEKLLSS SLAMRNLRRKVALASPRRTEN >gi|224531372|gb|GG658180.1| GENE 256 260854 - 261213 734 119 aa, chain - ## HITS:1 COG:FN1270 KEGG:ns NR:ns ## COG: FN1270 COG0718 # Protein_GI_number: 19704605 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 32 119 1 88 88 103 76.0 8e-23 MVRKLKGNRPAQAAAGNQMDILKQAQAMQQQMLQVQEELKGKDLTVSVGGGAVNVKVNGQ KEVLEVKLSDEILKEAASDKEMLEDLILSGINEAMRQAEELAESEMNKVTGGINIPGLF >gi|224531372|gb|GG658180.1| GENE 257 261281 - 262975 1896 564 aa, chain - ## HITS:1 COG:FN1271 KEGG:ns NR:ns ## COG: FN1271 COG0616 # Protein_GI_number: 19704606 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Fusobacterium nucleatum # 15 563 1 563 565 337 38.0 4e-92 MKTLLQFFKKIFLFLFREICSFFIKLVLSLILLAIVVGTFISYISKENTTEIKQGSYVLL RASSPLSEHIPIPDPLSLQEKHMTFFEVLYALDSIRQDQRIQGVLLDADFLSWNKAQLEE IGNKLQKLEKEGKKVITTLQEVNRNNYFLASYTKEIVMTPIHAASSNISPYHYEELYWKN LLDRFGVSINVIPIGDYKSYMENYSHSQMSKEFRENMTRILDKSYDYSIEAIANNRKLEK NTLKAWIENGEFMGTSFPTLFEKGLITKGEYPNRIRDEIGDDKIISIQEYFSLVKMKTRP KNYLALLNLEGTIEDETLFLDEVKAIQKDQNVKGVILRINSPGGSALVADTMYHAVKKLR EKIPVYVSISGTAASGGYYVAAAGEKIFASPLSVTGSIGVVSMIPNFSNLEKKANVVTES ISKGKYADLYSYLQPLSEENYNRIREGNLGVYQDFLEVVSSNRNIKKDFLDKNLAQGRVW LGIEAKENGLIDELGGLEATIYALEQDKKLGTLPILQVSKNDVFGQYLGKYRKFLSVLPS SMQQKVPKDRLWNKPLMYFPYEVE >gi|224531372|gb|GG658180.1| GENE 258 262985 - 264760 2221 591 aa, chain - ## HITS:1 COG:FN0887 KEGG:ns NR:ns ## COG: FN0887 COG1164 # Protein_GI_number: 19704222 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Fusobacterium nucleatum # 3 587 11 595 600 733 64.0 0 MNYTWNLEDIYPSWEAWEQDFQKMKKDMEIIPNYQGKIHNSRENFVEMTKLEESLSRLVD KLYLYPYLMKDLNSKDEVASMKLQEMEAIFTDFGVKTAWTVPETLMIPEHTMKQWILEDD FLKDYAFPLQETYRLQKHVLSEEKEQLLSYFSQYLGAPDDIYSELSISDMEWKTVKLSNG WEGPITNGMYSKILSTNRNQEDRKLAFEALYEAYHKNKNTYGAIYRSLLQRGVASSRARN YSSTLEKALEGKNIPKEVFLSLLDSALKNTAPLQRYAKLRKKVLGLKEYHYYDNSISLLE YDREFPYEEAKQLVIDSVLPLGEEYQNKIKTALSDGWLDVMEKENKRSGAYSINIYDVHP YMLLNYQGTLDDVFTLAHELGHTMHSILSTEHQPFATHSYTIFVAEVASTFNERLLLDSM LEKTKDPKERIILLEQALGNIVGTYYIQTLFANYEYQAHQLVERGEAVTPDILSGIMEQL FKQYFGDTLVFDELQKIIWSRIPHFYHSPYYVYQYATSFAASANLYKQLKTNPESVTKYL RLLQSGGNDYPMEQLKKAGADLSKVESFDAIAEEFNRLLDLLEKELENYQA >gi|224531372|gb|GG658180.1| GENE 259 264789 - 266054 834 421 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 1 410 3 421 447 325 43 1e-87 KMVNTNELGLKTKLVLGAQHVLAMFGATVLVPFLTGMNPSIALIAAGLGTLIFHAVTKRI VPVFLGSSFAFIGAIALVLKNDGIAVVKGGVIVAGLVYLVMSLIILKFGVDRVKSFFPPV VVGPIIMVIGLRLSPVAMSMAGYSNGGFDTKSLIISSIVVISMVCISILKKSFFRLVPIL ISVAIGYTVAIFFGLVDFNLISQAKWIGLSDDAFHALVTVPKFTFTGIVAIAPIALVVFI EHIGDITTNGAVVGKDFFQDPGIHRTMLGDGLATIAAGFIGGPANTTYGENTGVLAVTKV YDPSVLRIAACYAIILGFLGKFGVMLQTIPTPVMGGVSIILFGMISAVGARTIVDAQLDF SNSRNLIIASLILVFGIAINEIAVWGTISISGLAIAAFVGVILNKILPEDQPYTKKQLRK M >gi|224531372|gb|GG658180.1| GENE 260 266098 - 266481 592 127 aa, chain - ## HITS:1 COG:FN0889 KEGG:ns NR:ns ## COG: FN0889 COG5496 # Protein_GI_number: 19704224 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Fusobacterium nucleatum # 1 124 1 123 127 107 50.0 7e-24 MLEVGLQCEVSKVVQMEDTAAKVASGLLDVFATPMMIALMEKAAYTLVQDHLAEGDSTVG VEIGAKHVKATPVGTTVKAIATLTKIEGRFLTFSVQAFEEDGTLIGEGTHQRCIINSQKF IDKLNKR >gi|224531372|gb|GG658180.1| GENE 261 266576 - 266683 64 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCYNNLQVREVEERKQYYEKDNDGDDILFLFFISG >gi|224531372|gb|GG658180.1| GENE 262 266628 - 267185 542 185 aa, chain + ## HITS:1 COG:FN1114 KEGG:ns NR:ns ## COG: FN1114 COG3683 # Protein_GI_number: 19704449 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 185 16 196 196 141 45.0 5e-34 MKKIMMGMIFYFCFLFQDSLAHPHVFFDTQVSIQIEKKKMEGVEVTLLLDEMNTLLNQKV FRASKEGDVKDKNIVFLKYLYSHIRVFWNGKRIPKQDILFELAMLEEEQLRIDFFVSIDK PIQPKDKLSISFYDTDYYYTYDYNKSSFHLNGLEKGRWNTRFYTDKGISFYFKTVHPDIY EVIFE >gi|224531372|gb|GG658180.1| GENE 263 267182 - 267949 755 255 aa, chain + ## HITS:1 COG:FN1115 KEGG:ns NR:ns ## COG: FN1115 COG2215 # Protein_GI_number: 19704450 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Fusobacterium nucleatum # 17 249 1 239 244 135 37.0 6e-32 MRKKIFLGIFIVLILIMLWKFPNIYRFLILEQKHFIQLMKQSIREQQDGVLGILIVLTFF YGLIHSLGPGHGKSFLVTYVLKEKIATWKLLCMTAMIAYLQAFLAYVFVTFILDLASQSS MLSLYTLDQKTRFLSAIMIVLIASFDFILLFRKKEESPKECWLFAGVVGLCPCPGVMSVL LFLNLLGYEAYSKMFTLSTATGIFCMLSVFGFMAGKMKEYLVQESSPKILEYLHIIGIIL LFGIGIYQIYFSIFI >gi|224531372|gb|GG658180.1| GENE 264 269424 - 270071 788 215 aa, chain - ## HITS:1 COG:FN0890 KEGG:ns NR:ns ## COG: FN0890 COG1564 # Protein_GI_number: 19704225 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Fusobacterium nucleatum # 1 208 1 207 209 161 42.0 6e-40 MKRAYLFLNGELRGSQNFYQNLLQEKQGDIFCVDGGSRHLQSLGITPKELWGDLDSTSPI LRVEWEKQGCQVFQFPIEKDFTDFELLLQSLEQRSYEEWIVIGGLGGDTDHLLSNLYLCI QYPKIQFLSEEESIFLSPSHYLFQNLQGHKVSFIPFSNSILSLSLKGFQYNLSSYHLQQG ETLCHGNTIVKEKAEITFENGLLLVVLKNKKLISK >gi|224531372|gb|GG658180.1| GENE 265 270071 - 270895 973 274 aa, chain - ## HITS:1 COG:no KEGG:FN0891 NR:ns ## KEGG: FN0891 # Name: not_defined # Def: DNAse I homologous protein DHP2 precursor (EC:3.1.21.-) # Organism: F.nucleatum # Pathway: not_defined # 9 274 14 279 279 320 60.0 5e-86 MKFFYQCLLFLCLSIASFAQEAYIASFNVLKLGESPKDFETMAKTIEHFDLVGLEEVITP EGLERLVKSLNKYTNHTWDYHISPFPVGTRKYKEYYAYVWKKDRVTFLSSEGFYPDREKL FIREPYGANFQIGKFDFTFVLQHAVYGKSETERRAEAFQLVKVYRYFQDRNKKENDILIG GDFNLSAFDEAFSSLYEDKDQIIYGVDPRIKTTIGMKKMANSYDNIFLSKKYTEEFTGKS GAIDFTNRQYKVMRNKVSDHLPVFIIVNIDRDDD >gi|224531372|gb|GG658180.1| GENE 266 271037 - 271765 1006 242 aa, chain + ## HITS:1 COG:FN0892 KEGG:ns NR:ns ## COG: FN0892 COG0560 # Protein_GI_number: 19704227 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Fusobacterium nucleatum # 1 241 3 244 247 300 64.0 1e-81 MKQIAAFFDIDGTIYRNSLMIEHFKKLIKYELLDMEAYQQHVEESFKLWDTRTGDYDEYL NKLVQSYVKAMKGMLVSYNDFISDQVVYLKGNRVYAYTREKIKWHKEQGHKVIFISGSPD FLVSRMAKKWEADDYKASQYLLDETEKEYSGEIIPMWDSVHKIQALEEFRKKYDIDLTKS YAYGDTNGDISMLTSVGFPRAINPSRELVMKIKETPYLQENAKIIIERKDVIYELDANVK IK >gi|224531372|gb|GG658180.1| GENE 267 271924 - 272577 637 217 aa, chain + ## HITS:1 COG:FN0186 KEGG:ns NR:ns ## COG: FN0186 COG0785 # Protein_GI_number: 19703531 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis protein # Organism: Fusobacterium nucleatum # 1 217 1 217 217 231 72.0 7e-61 MLNGELFVGAVYLAGLLSFFSPCIFPLLPVYLGMLSSGGKRSLLKTIVFVIGLSSSFVLL GFGAGSVGALLTSSTFRIISAIIVILFGFIQMDVIKASFLERTKLVELKQKEEDSVLGAF ILGFTFSLGWTPCVGPILTSILFLSSGGGSPVYGALMMFIYVLGLATPFLIFSFFSKQLG SKMGSFRKYLVPLKKIGGVLIVIMGILLLTDRLNLFV >gi|224531372|gb|GG658180.1| GENE 268 272597 - 273226 729 209 aa, chain + ## HITS:1 COG:FN0187 KEGG:ns NR:ns ## COG: FN0187 COG0526 # Protein_GI_number: 19703532 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Fusobacterium nucleatum # 1 195 1 205 209 195 60.0 4e-50 MKIWKKLLCSAMLVLGCSTAFAKGEDFSKIMLKDVAGKEYSFGKMKKPTYVKFWASWCPV CLSGLEEIDNLSKEKKDFEVVTVVFPGKKGEKSAVDFKEWYRSLEYKNVKVLLDEKGELL KLVNPRVYPTSVVLDASSKVQKVIPGHLAKAEIKSLFPMLKMDKKMDSKMMNDMMMKDNK MDKMMKDDKNMKMEKAGDSKNEKKRQCSN >gi|224531372|gb|GG658180.1| GENE 269 273246 - 274172 1032 308 aa, chain + ## HITS:1 COG:FN0188_2 KEGG:ns NR:ns ## COG: FN0188_2 COG0229 # Protein_GI_number: 19703533 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Fusobacterium nucleatum # 161 308 1 148 148 265 85.0 1e-70 MAGGCFWGVEAYMEKIYGVVDAVSGYANGKTKNPKYEDLIYRGSGHAEAVFVKYDANKIS LETLLKYYFRIIDPTSVNKQGNDRGTQYRTGIYYKDIQDKKIIDAEIRLQQQKYKKKIVV EVLSLQNFYKAEEYHQDYLKKNPNGYCHIDLSKAHDIIIDKKKYPKLSEKELKMKLNVQQ YKVTQQGDTERAFQNDYWNFFEAGIYVDITTGEPLFSSKDKYNSACGWPSFTKAIVPEVV TYHKDTSFNMIRTEVRSRSGNAHLGHVFDDGPKDRGGKRYCINSAAIQFIPLKEMEEKGY GYLLSLVK >gi|224531372|gb|GG658180.1| GENE 270 274185 - 274958 1113 257 aa, chain + ## HITS:1 COG:FN0189 KEGG:ns NR:ns ## COG: FN0189 COG4753 # Protein_GI_number: 19703534 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Fusobacterium nucleatum # 2 257 3 260 261 302 68.0 3e-82 MRLLIADDEPLIRRGIKKLVNLSEIGIEEVYEADNGEETLQLYEQYHPEIVLLDINMPRV DGLTVAKEIKSLSPKTKIAMLTGYNYFDYAQKAIRVGVEDYILKPVSKKEITEIIAKLAH SYQEERKQETIQKVFQQKVEVIQENSKNDYHSNMKRYMEENYTDSQFSLGVLAEKLNLSS GYLSILFKKTFGIPFQDYLLQLRMEKAKLLLLTTHLKNYEIAEQIGFEDVNYFSLKFKKY FQLSPKQYKEMVLKNEN >gi|224531372|gb|GG658180.1| GENE 271 274948 - 276603 1602 551 aa, chain + ## HITS:1 COG:FN0190 KEGG:ns NR:ns ## COG: FN0190 COG2972 # Protein_GI_number: 19703535 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Fusobacterium nucleatum # 4 549 5 550 552 747 72.0 0 MKINRPLNVKIGIYFLLTNFILVILLGSIFYFSSSNLLIQKDISAAEEAIARSGNYIELY ANKLTSFSELISQDESVYRYLKYKDESEKARILRMIQNTLKTDAYIQSIILLRKDGYVIS NEKNVNMEISSDMMKEEWYVQALKNSMPILNPLRKQNFSQDDMEHWVISVSREIHDENGE NLGVLLIDVKYQALHEYLQSRELGEQGDTIILDELERIVYYKDIPCMNAKNTCLQRFRTI QEGYDRSSNTIMVKYPIHHTNWVLVGISSLEEIRSLKVHFLELIFMSALASIIITWVISS FILNRITKPVRELEKHMSHFSESLSKVSLTGDVSAEILSLQNHFNDMIEKIKYLREYEIN ALHSQINPHFLYNTLDTIIWMAEFEDTEKVISITKALANFFRISLSNGKEKIPLKEEIRH IQEYLYIQKQRYEDKLEYEFDINSSLENIEVPKIILQPLVENALYHGIKNLQGAGKIRIY SRIFEKKFELIVEDNGVGFEKAKQQATMKMGGVGVKNVNKRIQFYYGEEYGVKIDSGFTA GARVIISLPLM >gi|224531372|gb|GG658180.1| GENE 272 276753 - 277235 606 160 aa, chain + ## HITS:1 COG:TM0012 KEGG:ns NR:ns ## COG: TM0012 COG1905 # Protein_GI_number: 15642787 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Thermotoga maritima # 9 158 23 175 176 167 50.0 6e-42 MICKDNIGFKKLEEVINEVEEKEMAIIPILHKAQEIFGYLPEEVQQFISQKTNIPIGRIY GIVTFYNFFSTNPKGKHQISVCTGTACYVRGAQKVLDEIKKELGIDVGQTTEDGLFSLDC LRCIGACGLAPVMMIDSDVHGKLEKEQVKEILSFYRNQKA >gi|224531372|gb|GG658180.1| GENE 273 277248 - 279032 2213 594 aa, chain + ## HITS:1 COG:TM0010_1 KEGG:ns NR:ns ## COG: TM0010_1 COG1894 # Protein_GI_number: 15642785 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Thermotoga maritima # 6 526 8 527 527 649 58.0 0 MCERKIYICGGTGCMSSKSKRLKENIEAILASNHLEDKVEVRLTGCFGFCEKGPIVKIMP DNTFYTEVNPRDAIEIVETHIIYGKKIERLLYQDPKTGEIIHNTEDMNFYQKQERRILHN CGVINPESVEDYLEQDGFRAIQKALQEMTPVKVIQEIQNSGLRGRGGGGFPTGIKWEIAS KQEGNEKYIVCNADEGDPGAFMDRSILEGDPYGVIEGMMIAGYAIGANHALIYIRAEYPL AISRLQKAIEQARKKGYLGKHIFGTSFSFDVDLKFGAGAFVCGEETALIQSMQGERGEPK SKPPYPAQSGYLGKPTVVNNVETLLNVPLIIQHGSEWFREIGTEKSPGTKVFALAGKVNN VGLVEVPMGTTLREIIYEIGGGIKNGKRFKAVQTGGPSGGCLTNKDLDISIDFDTLAARG SIMGSGGMIIMDEDDCMVSIAKFFLEFTLDESCGKCTPCRIGNTRLYEILTRITEGEGTM EDLKLLEELSDTIKEASLCGLGQTSPNPVLSTLKEFREEYIQHIEDKTCLAGVCQKLTHY RITDKCVGCTLCARNCPVHAIVGTVKKQHIISQELCIKCGICYDRCKFGAITRA >gi|224531372|gb|GG658180.1| GENE 274 279050 - 280753 1814 567 aa, chain + ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 217 558 5 357 372 274 42.0 3e-73 MVSLEIDGKMLEVKEGRTILEAAKEIGIEIPHLCYMNLEEIGFKNDCSSCRICVVEVEGQ RRLIPSCNTPVANGMKIWTNTKRVMQKRRNIVELLLSDHPKDCLICGKNGNCELQKIAIS FGIRKIRFSGRESSYEKEESVAITRDVTKCIMCRRCESICRDIQSCNILTGVRRGFSAVV DTAFSRSLQHTRCTFCGQCVSVCPTGAIYETDNSFQLFQDIMNEEKIVVMQVAPAVRVAI GEMFGMEAGTDVTGKLVSALKKIGIDYVFDTNFAADVTVMEEATELKYRMEHGKILPIFT SCCPAWVRFLQQNYPEMEKYLSSTKSPQEIFGAIAKHIFQKEQEKEVVCVSLMPCVAKKY EASIGKDVNYSVTTREIVNLLKQFNIDLSLMPEEDFDQPFATSSGGGDIFGRSGGVMEAT ARTLYYLLEKEDLKEVAFHNLRGFDGLKFSEVKIGEKVLRLAVVHGLRQAREVVEAIRNG QLQIDALEVMACKGGCLAGGGQPYHHGDFSIIQKRTEAIQRLDDRNSIQCSHQNQDVLRM YREKIGSIYGDEAKELFHYEKGRKLVI >gi|224531372|gb|GG658180.1| GENE 275 280802 - 281677 1023 291 aa, chain + ## HITS:1 COG:FN0489 KEGG:ns NR:ns ## COG: FN0489 COG0682 # Protein_GI_number: 19703824 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Fusobacterium nucleatum # 1 286 1 286 288 394 74.0 1e-110 MQPVIFSIGGFELHYYGLMYAFAFLVGIQLAKKMAKERAFDINIIENYAFVAILSGLLGG RLYYVAFNLSYYLQNPMEILAVWHGGMAIHGGILGGILGTYIYGAIKKINPLTLGDFAAA PFLLGQAIGRIGNLMNGEVHGVPTFTPWSVIFQWKPKFYEWYTQYLTLPIEEQKKFPDLV PWGLTFPSSSPAGMEFPNLALHPAMLYELVLNLVGTAILWFILRKKTEKAPGFLWWHYII FYSINRIIISFFRAEDLMFYSFRAPHIISAILIMISIVALVFSQKKKEKKC >gi|224531372|gb|GG658180.1| GENE 276 281671 - 282975 1370 434 aa, chain + ## HITS:1 COG:FN0978 KEGG:ns NR:ns ## COG: FN0978 COG1757 # Protein_GI_number: 19704313 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 1 430 1 430 431 392 56.0 1e-109 MLGILSILLFAVTLIACIFYQLSIIYALVLGSLIFLAYGIIEGYSFSELWKMILSGVLTV KNILIVFLLIGMITATWRASGTIAMIIFLGSKLITPSIFILLSFLLCALLSVLIGTALGT SATMGVICISIARAMGIDELFVAGAVLSGIYFGDRCSPMSTSALLISEITETNLFENIKA MIKTSIIPLLITCALYFILGMKSEGSADVSVISSLFQENYRLHWIVLLPAIFMILLSFFK VNVRITMSISIFLSFGIAYFVQGEEIENLFQYLIYGYRHSNVALNKMMHGGGILSMWKVS LIVGISSSYSGIFAKTNILTKLKEYIKILSQKITDFGAVLVTSVITCMIACNQSLAVIMT QQLCKDIMKKEKLAITLENTVITVAALVPWSVAMAVPFQALEVDNIAAIYGFYVYLIPLW NLGMAIKKEKVEVN >gi|224531372|gb|GG658180.1| GENE 277 282983 - 285511 2115 842 aa, chain - ## HITS:1 COG:FN0374 KEGG:ns NR:ns ## COG: FN0374 COG0608 # Protein_GI_number: 19703716 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Fusobacterium nucleatum # 2 842 3 844 844 694 44.0 0 MRNTKWIYQNYKYYPQKIEKKEAIHSIVYSIMKERNLSHQENFNTNPFLLKDMEEAVSLL QEAKKKKQTIWIYGDYDVDGITSVSLCYLALSELGYEVEYYIPLRDEGYGLNQEALQSIY NQGGKIVITVDCGIVSSKEVDFANSLGMTMIVTDHHELQGELPKAAAVINPKRKENIYLF PSLAGVGTAFFLITALFEKEGKRKEITKYFDIVALGTIADIVPLIEDNRILVQQGLSLLA KSQWTGLRILVKRLFPDYETHHFSAYDVGFIIAPIFNAAGRLEDAKSSVRLFLEKDSKKA NEQIDYLIQNNLDRRAVQEKILQACLEEISQKKLEDKNSIVIAREGFHHGVIGIVASKLV DRFYKPTIIMEIKPNEGIATASCRSISGINIVESLEAVSHLLLRYGGHSGAAGFSILIEN IAKFYEEFEAILEDKISKEITTRKLNITKELLPFQIQYPLLHDMKYLEPFGASNPAPIFS LKHCKLDKIRLIGADKKHIMCNIHHGDTIFWNCVWFQAFDIYEELLYIQEVDVAFHLKLE TYRGRYQYKIFIDDIQSSNTTNEVRYHQEEIEYSYVQFPYEVILYLKHTNLSENLSLNFE EREVRLFSNRSYIAYLDSNTSKILHYWKQEKNCNFHVRKKEVFLEEEHYKIHLEITINED FHSYSLKEGQLFQDIKNFLLGKEGKYNSIQTKILASLFKKRQNTLATMECGRGIRTLINT IKLYADYTKQQYQILENWDEKEKIETQCQFHIFLFPKTPKKIPALSSRILILTGQDQILE GYFTIEDSYSLPKNIHWIEEEEISKHKIVFSHRLRKEKQKKILEQLLNLQDFYATKDLLV HL >gi|224531372|gb|GG658180.1| GENE 278 285508 - 287340 1580 610 aa, chain - ## HITS:1 COG:no KEGG:Ilyop_0494 NR:ns ## KEGG: Ilyop_0494 # Name: not_defined # Def: lytic transglycosylase catalytic # Organism: I.polytropus # Pathway: not_defined # 9 603 5 628 630 128 24.0 8e-28 MKRKVLYTLFYLFLSSHFLFSYSYEDYELYLKAKKEYQEKKYQEAYETLSLLKRIFPYSR VQKSKLSDYYLALIQYQLDQKEEAIRGLTANILPLHTEERDYLLGTLYMNKKNPKQANLY FQRLLSSEYSYSHEKIEKKIEQILCKNNPYYQHYFAAKFYQNFESISNLTKKDILEIASY LSSKGEEQNSQTLLLKFLKENQGKKEDFFPFYSALLNSFFQTKSYDKVIQYANLFSKVDI QAIENRDFYLLQKARAYHHKKQYIKAISCYETIKNPRYQSDASLELAAIHYTLENYDTVI QILEKKSPKTTYDWKLLGNSYFILKEREKFLSVAQKIEEKESNAYENILYHYLIAHPKET TDKDNSLYFTNFVVNRYLENLYPFDSSDTLKSTLLEYEKLKDFAPMYDRDLIELEFKNSH FYYKSNIETAYAVSKFYEKFGFYDLAYQNSKRNASLFSRFKNSISLLFPRYYPELIKKYS LQYNISEEILNTLILLSSEWNNNYEKENKLGLFALDFRNTSEASNLKNPEISIKLACQKL KKIQKKYPQALATMIVFLYGESYYKELIWEENGDISLNKISDLNMRYEIQQLILHYCFYK NLYSTLGRKI >gi|224531372|gb|GG658180.1| GENE 279 287490 - 289262 2195 590 aa, chain + ## HITS:1 COG:FN0462 KEGG:ns NR:ns ## COG: FN0462 COG0323 # Protein_GI_number: 19703797 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Fusobacterium nucleatum # 1 590 7 643 643 614 53.0 1e-175 MGKIHILEESVSNAIAAGEVVENPASLVKELLENSLDAGSKNIYLFIREGGRFVEIRDDG MGMSREDVLLSVERHATSKIKSKEDLFALQSYGFRGEALSSIASVSKMSITSCEVDANLG TKMTVLGGKVTGIKDFPRTQGTDIIIQDLFFNTPARLKFLRKASTEYIQIKDIVLKEALA NPEVKIHLEIDGKESICSSGNGLENTILEIFGKNALKNLTKFSYGYLGNEKLYRSSRDSI FVFVNGRPVKAKLIEEAIIDSYYTKLMKGKYPFACVFLEIPASEIDVNVHPSKKIIKFAN ASEVYSQVRNAIEEVFEEEKEFSFAQFSVKEVEEDREEKKILESFEIAENREAKEVFKEI KEEKKYFQEEKTDKIPLFDLQNDKIPVIKDRRSFFEEEKISPKTYDFKILAQIYDTFLLV ERNGIFEIYDQHIVHERVLYEELKEKYYGNAIQKQQLLVPLKLSLDPREKELFFENQEQF SFFGIEGEDFGGNEIIIRSVPSVELKASMEEIIREILYQLQHEKERDIRESMIISMSCKG AIKANQKLVLEDMYPLVQKLHEIGEYTCPHGRPIIMQLPFEELEKWFKRK >gi|224531372|gb|GG658180.1| GENE 280 289293 - 289760 592 155 aa, chain + ## HITS:1 COG:FN0463 KEGG:ns NR:ns ## COG: FN0463 COG1576 # Protein_GI_number: 19703798 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 155 1 155 155 173 56.0 1e-43 MNVSIVCVGKVKDKYILDGIAEFQKRLQAFTKFDIIEVKEYGREQTIAQSTEKETEELLS VLEKIGGYHILLDLKGKERDSVQMAKHLENLQVQGNSRINFIIGGSDGYTEELRSYCQEG ISFSKFTFPHQLMRLILIEQIYRWFSINHHIKYHK >gi|224531372|gb|GG658180.1| GENE 281 289800 - 290129 585 109 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452677|ref|ZP_05617976.1| ## NR: gi|257452677|ref|ZP_05617976.1| hypothetical protein F3_06389 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_03758 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 109 1 109 109 124 100.0 2e-27 MYSQGETFYYDIEDEEYELSVLSTFLVGEQEYLITEDFDGTLHVFIYDEDEDDIFLVEDE DEAAQLIQDWKDEYLDGEDIGDYEDDEYYDREDRYQEESYNEIEEDDEY >gi|224531372|gb|GG658180.1| GENE 282 290129 - 290515 367 128 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315917694|ref|ZP_07913934.1| ## NR: gi|315917694|ref|ZP_07913934.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 128 2 129 129 226 100.0 6e-58 MIPEKWMIKSQDTYGKNLEVVNLKEFQQNGVYSYYYDSRLGECELVFFEKENRISLLRKG KNELHLNLQVGRTFEMKYQAEGYQDTFFVRALSCKREEGIFEFSYDILEENGERINQIVI QMKRRKSR >gi|224531372|gb|GG658180.1| GENE 283 290512 - 291744 1391 410 aa, chain + ## HITS:1 COG:no KEGG:FN0465 NR:ns ## KEGG: FN0465 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 7 401 1 403 410 116 28.0 1e-24 MKKLLMLVGMSLLTACTSLDATKAKEDIREILLPKNQLENSTPMENTKIEEKVEVEKSEW KLSLETMPEVLTSIRMELKNNQKMVFDAKVNKISLYVGQTAVIKDNAGMNKLKLLVSPQK SNPNLKTGSSMFTFRSIYQGTYVVAWETLSGVKKQLTIENHLKYKFTEEENYDIILRSFQ EQNLKALEESVALYRMSFSNGKNTRKSMLSLLELATIKKDKKLIRESLQYWSKIQGLNTE ESKAVQEGKKIVGLSKIPEKRVEKEDIKISVENDSSDLVSGNYEQYKSLYRSANRKATLH LYNAAIKDYQKALIIGKKFPETVSIYDGLGNSYYGLGKYQQSIEYFQKSLSHKGNSSERR AETYYKLASAYNKLGEKREYKKYLTLLKERYANSLWGKKAQIELMKLNER >gi|224531372|gb|GG658180.1| GENE 284 291758 - 293239 2094 493 aa, chain + ## HITS:1 COG:FN0466 KEGG:ns NR:ns ## COG: FN0466 COG1190 # Protein_GI_number: 19703801 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Fusobacterium nucleatum # 1 493 1 493 493 808 79.0 0 MEKYFDRAAKESLIMEKWKKIEELKEMGIKPFGGKYDKKHMVGDILKHTPEEELIFKTAG RIMSFRRKGKIAFAHIEDQTGKIQIYVKQDELGEEAFQLVKMLNVGDMVGIEGTLFITHT GELTLRANVVTLLTKNIRALPEKFHGLTDVETRYRKRYVDLIMNREVKETFLKRTMIIKE LKKYLDDRGFLEVETPMMHPIVGGAAARPFITHHNTLDVDLYMRIAPELYLKKLIVGGFD KVYDLNKCFRNEGMSTRHNPEFTTVELYQAYADFNDMMDLTEGVITTLCDKVNGTYDITF DGVDLHLKDFKRVHMVDLIKEVTGVDFWRKDITFEEAKAFAKEHHVEIADHMNSVGHVIN EFFEQKCEEKVIQPTFIYGHPVEISPLAKKNEEDPRFTDRFELFINAREYANAFSELNDP ADQRSRFEAQVEEAERGNDEATPVIDDDYVEALEYGLPPTGGLGIGIDRLVMLLTGAPSI RDVILFPQMKPRD >gi|224531372|gb|GG658180.1| GENE 285 293311 - 293679 460 122 aa, chain + ## HITS:1 COG:FN0467 KEGG:ns NR:ns ## COG: FN0467 COG1380 # Protein_GI_number: 19703802 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Fusobacterium nucleatum # 1 115 1 115 118 85 50.0 1e-17 MLTEFLIITSLNYIGVVVTKILHLPIPGTIIGLILLFIFLATKQLKLERIEKVSNFLLEN MTILFLPPAINLIAAGSFLEGQILKIIFLMVATTFFTMGITGKVVQFLIEKKEERDERNH RG >gi|224531372|gb|GG658180.1| GENE 286 293657 - 294349 772 230 aa, chain + ## HITS:1 COG:FN0468 KEGG:ns NR:ns ## COG: FN0468 COG1346 # Protein_GI_number: 19703803 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Fusobacterium nucleatum # 1 230 1 230 230 252 63.0 4e-67 MKEIIVDNPYFGIVLTLFFFQIGKFIFQKTQSPLCNPLMIATVLIIALLHFFDIPLDDYT IGGDYILFLLGPATVVLAVPLYKQLNLLKKYFFPVLVGGIVGSFTAILSVIILGKALNFD FVLLLSFMPKSITTPIGIELSTMLGGIPAITIFAILVTGIFGNVSAPFICQVFRIKHPVA KGIGIGVASHAVGTTKAMEMGEIEGAMSALSIVIAGILTLIWAPIIKIFL >gi|224531372|gb|GG658180.1| GENE 287 294495 - 294755 335 86 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739595|ref|ZP_04570076.1| SSU ribosomal protein S20P [Fusobacterium sp. 2_1_31] # 1 86 1 86 90 133 82 8e-30 MANSKSAKKRVAVAERNRERNQAVKTRVKTMNKKVVVAVQDQDAEAAKNALSVAYKELDK AVSKGIMKKNTASRKKSRLAAKVNAL >gi|224531372|gb|GG658180.1| GENE 288 294818 - 295393 748 191 aa, chain + ## HITS:1 COG:FN1880 KEGG:ns NR:ns ## COG: FN1880 COG0778 # Protein_GI_number: 19705185 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 1 184 2 189 192 107 35.0 2e-23 MLEKIKKNRSHRSFEQVNIPTEDLHRILTAVSYSASARNAQENRFMFTNSFKQCKQIFKQ TKWAGAISWNPTEEEGPTAYILLCNPSEKPTAMSFVDMGIALQSMTLVAQDLGYSCCILG AYNKKEVEKIFGLPDGYFSFLLLAIGKATDTVEVVMTHDLSVKYQREEENHHTVFKLPME DVLLTNIDENN >gi|224531372|gb|GG658180.1| GENE 289 295368 - 296513 1142 381 aa, chain - ## HITS:1 COG:FN1041 KEGG:ns NR:ns ## COG: FN1041 COG4552 # Protein_GI_number: 19704376 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Fusobacterium nucleatum # 5 380 12 390 391 228 37.0 1e-59 MTKIEKAKYIWKNCFQDSEEETNFYFEKHFQEAQWKYYSKEDKILSSLHENPYTLKIKDS LSSYPYIVGVATLPEDRGQGYMTKLLLEEMLNLRNKNVDFCFLLPINPMIYRGFGFEYFS RKEEYSFDISLLPSQKRNDSIQILEITKENLEKHWKDWKKIYSISMIPYTLYEERDFNSF KNLLEEIYLSEGKIYLFYQKNRPSGYLILDTEEDKIHIREFLGTNHKAYLDMFAFLKGYQ EYYSKIQIMSPENSNLEFFFKNQCKIEKKSSPFFMGRILQVQSFLQKLQFIAPEITIFIE DPILFENTGYYTLTSEVSFTQNHIENYDFQIGIRELLPLVLGFFSFQDLIRLGKVKLHSV EHLAKIETLFTRKFNYFHQYW >gi|224531372|gb|GG658180.1| GENE 290 296526 - 296606 118 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFEDYAVELLLMITMITVCKMFMFTL >gi|224531372|gb|GG658180.1| GENE 291 296608 - 298041 1855 477 aa, chain - ## HITS:1 COG:FN1906 KEGG:ns NR:ns ## COG: FN1906 COG0260 # Protein_GI_number: 19705211 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Fusobacterium nucleatum # 1 476 1 477 478 467 50.0 1e-131 MYFQMISKIQKNYDKTISLLAENEIAFCSCVSKQNQDMITKIFQKKKFSAKEGEVCEISF LENENLCTTIFIGLGKKEDLTKNILRESLYSALEKETGHFLISSEDPDLIDLDIFAEIAE HINYDFDKYKSKKKDKFLYLDFYNPNQLKFPQESQILSEISSIVRNLINEPAAYMTPDRL SIEAQICSEKYGFEIEILDEHKAESLGMKAFLAVGRAAFDRPKVIVMRYLGNPHSKEKTA LIGKGVCYDTGGLSLKPTSSMLNMKDDMSGAATVIGIMSAVAQNKIKHNVIGVIAACENA IGPNAYRPGDVIGSLNGKTIEVTNTDAEGRLTLADALTYSIRIEKATELIDIATLTGAMY MALGSEACGVITNTPSLYEKLVKASENWREEFWQMPLFKNQKKSLKSSIADIKNSGPRQA GASFAAKFLEEFVEEKPWLHLDVAGTCFSEEGDSYYKKGATGQLLRSVYTYLKDKEL >gi|224531372|gb|GG658180.1| GENE 292 298184 - 298645 683 153 aa, chain + ## HITS:1 COG:FN0601 KEGG:ns NR:ns ## COG: FN0601 COG2849 # Protein_GI_number: 19703936 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 22 148 9 137 141 104 47.0 6e-23 MKRIFILLNFLMFSYWIEARTEIEYKNLEEKDGLVYYQEEIYSGKVTRGKDRYYYQDGKA DGTWLWFYPNGNLKTIETWREGKLQGKYILYLDNGNPIMKTSYSNGKDMGEYLLYYPNGR LRVKGRYEYGKPKGVWEYYTETGKLKGKGKEIL >gi|224531372|gb|GG658180.1| GENE 293 298723 - 300309 2375 528 aa, chain + ## HITS:1 COG:FN1975 KEGG:ns NR:ns ## COG: FN1975 COG0513 # Protein_GI_number: 19705271 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Fusobacterium nucleatum # 1 528 1 528 528 784 79.0 0 MEKKETLKEFRELGIGEKLLKALSKKGYETPTPIQSLTIPALLTGEKDIIGQAQTGTGKT AAFALPILENIEHQDKIQGIVLTPTRELALQVAEEMNSLGSSKKIKIIPVYGGQSIDIQR KLLRNGADIIVGTPGRVIDFIERKFLRLQDLKYFILDEADEMLNMGFLEEVEKILEATNE DKRMLFFSATMPNEILKVAKKHMKDYEILAVKARELTTDLTDQIYFEVNERDKFEALCRI IDLAEDFYGIVFCRTKTDVNEVVGRLNDRGYDAEGLHGDIGQNYREVTLKRFKAKKINIL VATDVAARGIDVNDLSHVINYAIPQEAESYVHRIGRTGRAGKEGTAITFITPQEYRRLLQ IQKIVKTEIRKEEVPEVKDVIQAKKFQIQKDIDEILGEGEYDKFKKLAQDLLKKEEAENI VASLLKLAYEDVLDESNYNEISSTKSVGGGKARLFVALGRKDGMTAKKLVEKVMKVAKVQ DKKIRNVEVYEAFSFITVPFKEAEIIIDSFKARQKGKKPLIEKAKSQK >gi|224531372|gb|GG658180.1| GENE 294 300321 - 301265 968 314 aa, chain + ## HITS:1 COG:FN1976 KEGG:ns NR:ns ## COG: FN1976 COG1559 # Protein_GI_number: 19705272 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Fusobacterium nucleatum # 23 310 22 308 310 300 54.0 3e-81 MKKASYITLFIFIIGILGYGYQQICKKREYQVALNFEYGKNIREELLKINARNHKLFWLY LRYFHQGGKDIKAGYYEIHGQYSWKDVLSMLEEGRGKYQKITIIEGTPLFQVFELLEEKG IGKAEKYREQLQMISFPYPTPDGNWEGYFYPETYNVPENYTEKDVIQLFLQEFLKHFPEE EYPDKEEFYQKLILASLLEREAKLEEEKPMIASVIENRLKKGMRLEIDSTVNYLYQYQKK RIYYKDLEKDSPYNTYRHTGLPPGPICSPTEKSMYAAYHPAKTDFYFFVTKGEGAHHFTK TYQEHINFQKKYKK >gi|224531372|gb|GG658180.1| GENE 295 301280 - 302614 1370 444 aa, chain + ## HITS:1 COG:FN1977 KEGG:ns NR:ns ## COG: FN1977 COG0037 # Protein_GI_number: 19705273 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Fusobacterium nucleatum # 1 443 1 448 448 274 40.0 3e-73 MQGFQKFLKDQKKYQYIQEGDRILVAFSGGPDSVFLVEMLLQLQEQLSFQMLLLHLHHMI RQEDADRDYQFCLEYARKKNLEIIAKKLDVPSYAKENRQSLEEAGRNLRYKFFQEIRKEK SYHKIATAHHLDDHLETFFFRLLRGSSMEGLAGISRKQGDRIRPLRDFEKKEILFYLEEH QIPYCHDKTNEEVEYSRNRIRLELLPQFDSYNPKWKEKVASFMEELEENKKGKSIDWRDY SEEDFLNVTKLQKEREYLQQKIIYEYILSKQISVNRKQIHQICTLLKKGGSLSYDLKNFW KFKKEYDRIWIEPIKKEEANMFVNDVEIKVPGEVYFQNYRIKILVCEENRSKGNQEFLWN WDGISSLKVRNFQEGDRIQLAGMKTPKKVKEIFINEKVPREQRKQIPILIYGEEIIALGN LRQAKWNKTDDGKIICIKIEEVRR >gi|224531372|gb|GG658180.1| GENE 296 302611 - 304800 1334 729 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 113 719 13 595 636 518 46 1e-145 MSDKQEKDIMEQEEQKELQETASEENIEQENQKLQTEEEKKEEEIHKTLEEDSKKDTTSR TQEENKKTEKRIYINNEEDLKKILRESFGNSKNNKNPKKLGGKFNFVGFLLLVFIVAVVL SFPKFMKDSKSGEELHEVSYTSFVKSIDEKKFQRIEEREGYLYGYLSGEKEEFRLNVSEE KTGTTATVVYKARMITDRLGEDSNVVSKMEAAGLDVKAIPPAQTPFILNLLASWLPILLL IGVWVFMLRGVGKGGGGGPQIFNVGKSKAKENGENITQISFADVAGIDEAKQELEEVVEF LREPEKFKKIGARIPKGVLLLGSPGTGKTLLAKAVAGEAKVPFFSMSGSEFVEMFVGVGA SRVRDLFAKARKNAPCIVFIDEIDAVGRKRGTGQGGGNDEREQTLNQLLVEMDGFGNEET IIVLAATNRPDVLDRALKRPGRFDRQVYVDKPDLKGRVEILKVHAKNKKFSKDVDFEIIG KKTAGLVGADLANILNEAAIIAARANRDEINMMDLEEASEKVEMGPEKKSKVVSERDKKL TAYHETGHAIARYALGSEEKVHKITIIPRGAAGGYTMSLPAEEKSYQTKQDLLDFMVFAY GGRAAEEIVFGKENISTGASNDIERATAYAKAIVTRFGMVDEFGPILLDGTQEGDMFERK YYSEQTGKEIDDVVRKIIKTQYQKTLDILKENRDKLEAVTKVILEKETIMGDEFEKIMSS DTKEFTNEV >gi|224531372|gb|GG658180.1| GENE 297 304890 - 305153 399 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|19705275|ref|NP_602770.1| SSU ribosomal protein S15P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] # 3 87 1 85 85 158 92 3e-37 MAMRSKEEIIREFGKKEGDTGSTEVQIALLTEKINHLTEHLRVHKKDFHSRLGLLKMVGQ RKRLLSYLTKKDLEGYRALIAKLGIRK >gi|224531372|gb|GG658180.1| GENE 298 305213 - 306295 1149 360 aa, chain + ## HITS:1 COG:FN1980 KEGG:ns NR:ns ## COG: FN1980 COG5438 # Protein_GI_number: 19705276 # Func_class: S Function unknown # Function: Predicted multitransmembrane protein # Organism: Fusobacterium nucleatum # 1 357 1 369 369 313 47.0 5e-85 MKKILIVLLSFFLFQMMYGEEEYVRGKILSLEDIITADSGDEEVQEVYIYRVKFLSGDRK GEEVSIEYPIYREEEYNIGAKPGDKVVLYYESNEIGDEKYYISDIDKRSQLLGISGLFIL LTLFISKKNGLKALLALGITVLFVIKVFIPSILLGYSPILFSVITGIFSTFVTIYLMTGF EKKGFIAIVGTLGGVLFAGILSYIAVNTMRLTGYETTDSLSFASYLKGIKLRELISAGVI IGSMGAVMDVAMSMSTAMHEIHQKKSDIGRKELFYSAMKMGNDMIGTMVNTLILAYIGGS LLLTVMVYIQREQFPMIRLLNFENIATEILRSISGSIGILICVPITAYVGSILYGKKTKR >gi|224531372|gb|GG658180.1| GENE 299 306391 - 307926 2289 511 aa, chain + ## HITS:1 COG:FN0396 KEGG:ns NR:ns ## COG: FN0396 COG0747 # Protein_GI_number: 19703738 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 509 1 510 511 640 60.0 0 MRKKHGIIMALLCMLMFVLTACGGGDKAATAPAEKDTLIVADGASPKTLDPRATNDNVSA RVMVQIYDTLVEQDENTQIQPGLAESWEQADDVTTIFHLRKGVKFHNGEELKASDVKFSL DAMKASPQTSEIIEPLKEVVVLDDYTVKVVTEFPFAPILNHLAHPTASIVNEKAVKEAGE SYGQHPVGTGPFKFVDWQSGDRVTLEANEEYYKGASPIKHLIFKNVVEITNRTIGLETGE IDIAYDIEGLDKLKIAEDPKLNLVEDLDLSMVYLGFNLKKAPFDNIKVRQAIAYAIDQQP IIDTAFQGAAFPANSIIGPKIFAHSDKGIKYQQNLEKAKALLAEAGYRDGFKTEIWINDN PTRRDIAVILQDQLKQVGIDVEVKTLEWGAYLDGTARGDHQMFILGWGTVTADPDYGINN LVSTKTVGAAGNRSFYSNPKVDELLQKGRSTIDPEARKAIYEEIQVILQEDLPMYYIVYP KKTVGMQKYIEGFKFNPAGHHRIYGVSFKAE >gi|224531372|gb|GG658180.1| GENE 300 308012 - 308938 285 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 5 307 5 316 320 114 25 5e-24 MYKYVIRRLLLLIPVLLGISLLVFAIMYVTPGDPAQLMLGENAPKAAVEALREKMGLNDP FIVQYFRFVGKAITGDFGRSYTTGREVFAEIFSRFPNTLVLAILGIIISVVIGIPIGIIS ATKQYSAVDSISMVLALLGVSMPVFWLGLMLILLFSVKLGLLPSGGFDGLKSVILPALTL GVGSAAIVTRMTRSSMLEVIRQDYIRTARAKGVSEKVVINKHALKNALIPIITVVGLQFG HLLGGAVLTESVYSWPGVGRMMVDAIRQKDSPTVLAAVIFLAAAFSIVNLLVDILYAYVD PRIKSQYK >gi|224531372|gb|GG658180.1| GENE 301 308953 - 309819 1528 288 aa, chain + ## HITS:1 COG:FN0398 KEGG:ns NR:ns ## COG: FN0398 COG1173 # Protein_GI_number: 19703740 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 5 288 6 289 289 431 83.0 1e-121 MAAANKKRSQWREVWRMLTKNKMAMLGLFILLFLIILALFADIIYDYDTVVIKQNLSHRL QGPSGAHWLGTDEFGRDILARLVHGARVSLKVGILAVGLSIVLGGILGAISGFYGGTIDN IIMRAMDIFLAVPSILLAIAIVSALGPSMINLMVAISVSSVPTYARIVRASVLSIRDQEF IEAAKAIGASNTRIIFKHIIPNALAPVIVQGTLGVANAILSIAGLSFIGLGIQPPAPEWG SMLSGGRQYLRYAWWVTTFPGLAIMVTILSLNLLGDGLRDALDPRLKQ >gi|224531372|gb|GG658180.1| GENE 302 309840 - 310847 604 335 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 22 320 35 328 329 237 42 5e-61 MDGKLLDIKNLEVQYVTDEETVYAVNGIDISLNEGETLGLVGETGAGKTTTALGIMRLVP NPPGKIMGGEIIYEGENLLKLPEEEMRKIRGNKISMIFQDPMTSLNPVMTVGEQIAEVIQ IHENITTEESMKKAGEMLELVGIPAARINDFPHQFSGGMKQRVVIAIALACNPKLLIADE PTTALDVTIQAQVLDLMNNLKEKFKTAMILITHDLGVVAQVCDKVAIMYAGEIVESGSLE EIFENTKHPYTLGLFGSIPSLDEERTRLIPIRGLMPDPTNLPEGCKFNPRCPHATDLCRQ KIPNAVEVSPGHKVKCFIAEGLVEFKEGWEAKDGE >gi|224531372|gb|GG658180.1| GENE 303 310837 - 311808 828 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 6 313 11 324 329 323 52 6e-87 MENKVLLEVKNLKKYFQTPKGPLHAVDGVNFSIEEGKTLGVVGESGCGKSTTGRVILRLL EATDGEILFEGKNIREYSKAEMSKLRQEMQIIFQDPFASLNPRMTVSEIIAEPLIIHKQC KSKKELEDRVLELMETVGLSQRLMNTYPHELDGGRRQRIGIARALALRPKFIVCDEPVSA LDVSIQAQVLNLMQDLQEKLGLTYMFITHDLSVVKHFSDDIAVMYLGELVEKAPSKELFR NPIHPYTKALLSAIPSTNIRNKMERIRLEGEITSPINPEPGCRFAKRCIYAQDICRKESP KLQEVHGNHFFACHRAEELDFIK >gi|224531372|gb|GG658180.1| GENE 304 311919 - 312164 461 81 aa, chain + ## HITS:1 COG:no KEGG:FN0683 NR:ns ## KEGG: FN0683 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 81 1 81 81 120 70.0 1e-26 MHDGCSGKFEDGKQVVQKLRMMGFSEQLMPVPAVFVCEDCKQEIIMDTFEYVCPHCNTVY AVTPCHAFDVENILSAGKKEE >gi|224531372|gb|GG658180.1| GENE 305 312342 - 312428 110 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSTSVSHPFGLLGAERSFLEMIYDIIY >gi|224531372|gb|GG658180.1| GENE 306 312498 - 313157 933 219 aa, chain + ## HITS:1 COG:no KEGG:Clocel_1110 NR:ns ## KEGG: Clocel_1110 # Name: not_defined # Def: suppressor of fused domain # Organism: C.cellulovorans # Pathway: not_defined # 1 219 1 219 219 262 58.0 9e-69 MTLEEFRELLEENEDWAPGWDAIEEAFSKVYKNQEPTHFGTLLPSRAVFGGKEFLDGYSM YQSSKGYKHLVSFGMTELYAEEEALGGEYSKWGYEMTIKLKEKEEEKCMWAVDMFSNLAR YTFQSNSFFEEFQYIAGDGTSICKDKKSKITALMTILDTEISPIDTIYGRVEFIQLVGIT ERELQKIQENPKNMKVLYERMKEDNPDFVLDLERTKSYL >gi|224531372|gb|GG658180.1| GENE 307 313323 - 316070 3184 915 aa, chain + ## HITS:1 COG:FN1836 KEGG:ns NR:ns ## COG: FN1836 COG0457 # Protein_GI_number: 19705141 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 16 914 14 936 936 559 41.0 1e-159 MKKKISTLGIYFLLTTLSFSGEREDFQRIDTLYKERNFDAALQQSVQYIKNYPSSSRILE MRNQVGKLYFIKREYSKAREQFRAILAMEPSGSTKNETYYYLARIYAALGENDQNRFALT QIKTSSSFYAKAHYESAIQYMEKMKYQEAIQLLAVPIHKKGDFYAESLLNTALAYFNQED FISSKKYLLEYSSVEQRKNRSLVEYLYGTMLYKENKVLDAVQRLETLVQQDSTSLYGKKA ILTLIEIYSNQGNAGKVEEKLAKLQGTPEYNRAMTMIGDLYVSKQQYQKALEMYAKSNQQ NDPRLLYGKAYSLYKLNRLEEALQFFEKLRSTDYYNQAIYHIFAIEYRLKHYQRILDNRH IMKRVVVTQTDNDNINTIIANAAYELGEYTLSKDYYGRLYAITPKKENLFRIILMDSKTM DIEDMARRFADYRKYYPSDTEFRKEITQAVGEAYYKAGKTEEAISVYRAYLQEKYDLEIT QALTVALLKEKRYGEMEEYLSRVPEGKENQYLRGIAAMGSGDHAQAEVYFYQMLTRLEEG NPEIPNIQLNRVRNFFLMEKYPEVTRVGESYLAKFASGKERQEVLDKVALSYFRLANYEK AREYDRQISMIDGFEEYGKFQIADTYYNEKKYQEAANQYKDLFTAYPNGKYAEQARYWYA NSLAMAGNQAAFTTEKQNFMRDYPNSSFVDNLTSLDKNLKSEMATKHLEESIKNKKTKNA QDLVSQVQSPEDKAYYQAKVYDSQKKSDLARKEYEKLLQSAKYKDYANLQLGNYWYARKD WKKAKNYYSSANSLGGAGNKDFVLYQLANLNAMEGKEQEALKLYRTVYKSYPGKYGVQAK TKAAEIFEKIGDEKSYLFLYQELSKVKEKEIRSYALEKLLYFSLEKENMKQAKIHYEALK KQDATKAKKYQDFFR >gi|224531372|gb|GG658180.1| GENE 308 316087 - 316452 465 121 aa, chain + ## HITS:1 COG:no KEGG:FN1835 NR:ns ## KEGG: FN1835 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 39 120 40 121 121 69 50.0 4e-11 MNKNKILISAFFLWSFFLFAEGEVRELPVEGATTTSNVLDKGITAQNEQTLEVKELDTQE LLLQNQDLESSSIKITGKALKEQQQQVKVVQNDTLKIEEELAAGVKPKSFWQKIKDFFTG E >gi|224531372|gb|GG658180.1| GENE 309 316467 - 317078 797 203 aa, chain + ## HITS:1 COG:FN1834 KEGG:ns NR:ns ## COG: FN1834 COG0811 # Protein_GI_number: 19705139 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Fusobacterium nucleatum # 17 202 1 186 187 245 68.0 3e-65 MQFMKIGGLLMWFIFALGVMGLYAILERTVYFTVKERNSIANLNKKLKDLLEKNKIKEAI VYLNSNKSSSARVLQAILIYGYKENKESLEALEEKGKEVAIQQLRYLERNMWLISVAAHV APLVGLLGTVTGMIKAFQAVALYGTGDPAVLAKGISEALYTTAGGLFVAIPAMILYNYYN KKIDSIVSDIEQSSTELLNYFRR >gi|224531372|gb|GG658180.1| GENE 310 317091 - 317525 634 144 aa, chain + ## HITS:1 COG:FN1833 KEGG:ns NR:ns ## COG: FN1833 COG0848 # Protein_GI_number: 19705138 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Fusobacterium nucleatum # 34 143 1 112 114 83 40.0 1e-16 MKLERNKRRGAGELALEMTPMIDVVFLLLIFFMLATTFDDKAGIKIDLPKSAIREEKVVH KLQLFADKDKNLYLLYEEAGKETRLSISQEELEGKLQEQLQRAEDKNLVISADQSLSHGY IVELMSSAKKAGATGLNIDTSYQK >gi|224531372|gb|GG658180.1| GENE 311 317540 - 317683 118 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKEVDIPCFLLSLGLSFLYFVFIIQHFTQGFGRSRKFKNWFSSNGK >gi|224531372|gb|GG658180.1| GENE 312 317673 - 318320 793 215 aa, chain + ## HITS:1 COG:FN1832 KEGG:ns NR:ns ## COG: FN1832 COG0810 # Protein_GI_number: 19705137 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Fusobacterium nucleatum # 1 215 20 234 234 103 35.0 3e-22 MENDNSLDSDGSSTTDAAPSELTKPQLPEPPTLEEIKEERKEESKEPETKVEEKVEEIGE IKKPNLADLKKTISKPKLENPSVNMDRFDKKTSPKNGIGIDIDRILSKATGQKGLPSGSR MGVVDGTAVIQWNPSNPEPSFPEVAKKTGKNGSVVLLITVNEIGDVISVRMEQGSGVPEI NEAISKVARTWKVKLVKKGTSVGGTFVLKYSFHLK >gi|224531372|gb|GG658180.1| GENE 313 318337 - 319725 1635 462 aa, chain + ## HITS:1 COG:FN1831 KEGG:ns NR:ns ## COG: FN1831 COG2204 # Protein_GI_number: 19705136 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Fusobacterium nucleatum # 1 462 1 464 464 551 66.0 1e-157 MILLGFRLDTELKEELSNNFENNLNFADNIVDFMECVKTKKYEAIVIEEQNLKDDNLMNL VAKVSEFQKKGVIIVLGETSNLKVVAGSIKAGAYDYILKPEENSTIVKIIEKSVKDYKLL AERVDKNRKIGDKLIGRSKEMIDLYKMIGKVAGNDVPVLVVGERGTGKTSVAKAIHQLSN VSDEGFLSINCNSFRGELIERKLFGYEIGAFQGANFNQRGILEQEEMKILHLGNVESLSL DMQSKILYLLEEQKFFRLGGQDAIQSKVRVIASTSEDLESRIQEGKFIEELYRKLRVVEI HIPPLRNRKNDIPFIADHYIMECNIELNTNIRGISRPALKKIMRYDWPGNVNELKNAIKS AMTLSRGTSILLEDLPSSVLGEKVMSKAGIGELSLKEWIRQEIQYYKNENSQDYYGQIIS KVEKELISQILEMTNGKKVETAEILGITRNTLRTKMNNYGLE >gi|224531372|gb|GG658180.1| GENE 314 319729 - 321165 1937 478 aa, chain + ## HITS:1 COG:FN1830 KEGG:ns NR:ns ## COG: FN1830 COG2812 # Protein_GI_number: 19705135 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Fusobacterium nucleatum # 1 475 1 483 484 426 52.0 1e-119 MYITLYRKYRPASFQEVAGEQEIVRALKNALKNNQLSQAYLFTGPRGVGKTTIARLIAKS VNCLNPKEDGEACGVCENCLSFQEGSFLDLIEIDAASNRGIDEIRLLKEKINYQPSQGKK KVYIIDEVHMLTKEAFNALLKTLEEPPSHVIFILATTEPDKILPTIISRCQRYDFKTLSL QDMGNQLQYILSQENLEMEEEVKELIYEASGGSMRDAISILERLLVSASEKKISLEESEK ILGMTPVQKMEQFLHCLLGEEKKEILEELDELWLESVDMEAFLKDFAKFIKNQIKKEKLG IEKGLFIIKNIYEVLNIFRLEEDKRLVAYVLVEKLLKQDSIRTSTMQKYKPVLENEKIKN GEKLTEEKTIISLLDIQNRWEEIIEKAREEKISMGVYLSTAKLVSLENSTLSLSYEESNL FSKEQMQEKQYSSILLKVLEEEFKQKFKLKVFTTISEKKQENRVAKKILDYFGGEIIS >gi|224531372|gb|GG658180.1| GENE 315 321162 - 321986 720 274 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_1264 NR:ns ## KEGG: Ilyop_1264 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 1 256 1 253 266 77 25.0 5e-13 MILAVLISVALFILSLSFPLIAFVLPSYQLKNSKKWGLRRTILLHFVIMICLWMVQKELF FIYFILPFSISIWYFFFTFILKKEESNMNQIVITALSSSVMLGVYWIVFHKQYQKEYELV LGIYQKAYQLTQGEIQGIHEYISSYFPSMIFQYMMLTVFFCYLVLVGMKKYRDWNLHYIW SIPYIVYSFLSNVFEIENIYVENFGEIAKAILLWYGIKSIYDLLADYFKRFAWILHGASF LLAIEFPNIVFIFGGLIMLLENYWRKKLGEIEKK >gi|224531372|gb|GG658180.1| GENE 316 322009 - 322458 562 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237738486|ref|ZP_04568967.1| LSU ribosomal protein L9P [Fusobacterium mortiferum ATCC 9817] # 1 149 1 149 149 221 71 4e-56 MAKVQVILTEDVAGQGRKGQIVTVSDGYAHNFLIKNKKGILATEEELKKMESRKKKEAQR AEDDRLKAVEVKKALESAKVVLGVKTGENGKLFGAITNKEVSIGIKETFNLDIDRKKIEC NIKALGEHIAVVRLHTEVKAEVKVVAVAK >gi|224531372|gb|GG658180.1| GENE 317 322475 - 323815 2063 446 aa, chain + ## HITS:1 COG:FN1827 KEGG:ns NR:ns ## COG: FN1827 COG0305 # Protein_GI_number: 19705132 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Fusobacterium nucleatum # 4 445 3 445 446 455 56.0 1e-128 MKTLEEISKIPHSLEAEQAILGGIFVEPDLFEEVLEIVSPEDFYKNMYSVIFRSMLEVYR ESNEIDMVLIKNKLLQVHQFTEEQINEELSNILENSFSAVNLKEYARLVKEKAILRRLGE AGRKITEIAYRDDRDAEDILDEAESIVLKVDQQKKGKEIISLREAAKIEFDRLERIEANQ GETVGVTTGFSDLDKDTGGWNPSDLVIVAARPAMGKTAFALNLVLNAAKKGNKSILVFSL EMSTQQLYQRFMSIEAGVALSKIRNGHLDSKDWGRLGAATDIIGNYDITIADIPNVNVLE IRALARKIKSRQDLDMIVIDYLQLIRGSSVRSESRQQEISEISRSLKSLARELDIPIIAL SQLSRSPESRPDKRPMLSDLRESGAIEQDADVVIFLYRDDYYNQESPDAGITEIIIGKQR NGPTATVKLRFFHELTKFANFTTRVD >gi|224531372|gb|GG658180.1| GENE 318 323840 - 325060 1564 406 aa, chain + ## HITS:1 COG:FN1826 KEGG:ns NR:ns ## COG: FN1826 COG0826 # Protein_GI_number: 19705131 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Fusobacterium nucleatum # 1 403 4 407 410 679 80.0 0 MKKAELLAPAGNVEKLKTAIHYGADAVFLGGKMFNLRAGSNNFSDEELEECVQYAHERGK RVYVTLNIIPHNEELEQLPDYVKFLEKIGVDAVIVADLGVFQIVKENTNLAISVSTQASN TNWRSVKMWKDMGAKRVVLAREISLENIMEIRQKVPDIELEVFVHGAMCMSVSGRCLLSN YMTGRDANRGDCAQSCRWKYSVVEETRPGEYMPVYEDERGTYIFSSKDLCTIEFIDKILE LGVDSLKIEGRMKGIFYVANVVKVYRDALDSFYSGNYEYNPKWKEELEATSNRSYTDGFY KGNPGVEGQNYNNRNSYSQTHQLVAKVEEKISENEYILAIRNRLFVGETLEVISPGISVR DFVMPKMILLNKGREEGEIEQANPNSFVKIVTDIPLSEMDMLRKKL >gi|224531372|gb|GG658180.1| GENE 319 325068 - 325727 795 219 aa, chain + ## HITS:1 COG:no KEGG:FN0749 NR:ns ## KEGG: FN0749 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 26 210 35 219 405 207 54.0 2e-52 MKKYILIFLCSMQGMLWADEIREVPIINMQDVYQKLSLAGKLDFCIFQQAYLGFLTISNK NADYLAIIDYTKPSNEKRFFLLDMINYKIVNQTYVSHAKNTGLDTAVHFSNDRNSMQSSL GFYLTKDTYKGEYGYSLVLEGLEDKINSNAEERRIVMHGGDFAEESYLKTYGFLGRSWGC PVLPKSEIALVIDKLKNRHVLFIAGNDTNYQEITKFKFK >gi|224531372|gb|GG658180.1| GENE 320 325769 - 326248 447 159 aa, chain - ## HITS:1 COG:FN0780 KEGG:ns NR:ns ## COG: FN0780 COG3610 # Protein_GI_number: 19704115 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 6 155 4 153 163 119 49.0 2e-27 MLLYILEVFWALLATLAFSIIFQVTGKRLILSTIAGGIGWIVLSVALHYFQYSSVTSFLF SAMSITIYAEIVAKKMNTTVTTTLIPGLIPLVPGSGIFFTMDNFVQGNYIKAVDLGRETL FVTAAITIGIVFITSLSQMIIRIVKYRTILQKHRKKIKR >gi|224531372|gb|GG658180.1| GENE 321 326249 - 327004 582 251 aa, chain - ## HITS:1 COG:FN0781 KEGG:ns NR:ns ## COG: FN0781 COG2966 # Protein_GI_number: 19704116 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 5 245 13 253 256 254 53.0 1e-67 MQEAKILSLANLTGKTLLQSGAETYRVESCIQQICKHFGLRAQTFVSITCIITSAKNKEG NSLCSVERVTSISNNLHRIDQIHDILLHLEEYDTSRLEKTIYKIRNTQVHKTSTLVTAYF FAAFFFCLLFKGGFQDAIMSGIGGILIFYLSLFTKKLRVNPFFFNTLGGFSCTLTAYLWY KLHILNSVSYASIGTIMLLVPGLALTNAIRDLVAGDLLSGISRACEALLIGTALATGAGF ALFLLFQLEMM >gi|224531372|gb|GG658180.1| GENE 322 327016 - 327744 887 242 aa, chain - ## HITS:1 COG:FN0782 KEGG:ns NR:ns ## COG: FN0782 COG4123 # Protein_GI_number: 19704117 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Fusobacterium nucleatum # 4 241 6 243 243 275 63.0 7e-74 MEKETTIDLLKKGLKIIQRNDYFNFSLDSLLISEFIKINKQSKKILDLGTGNAAIPLFLS LKTTAQIYGLEIQKVSYDLAIKNIALNHLEEQIQILHGDMKNWQEFFPRNSFDIVVSNPP FFEFHGNRELLNDLDQLTLARHEISITLEELIQVTSNLVKEHGYFYLVHRADRLVDILEL CRKYKLEPKRLQFCHTKRKKNAKILLLEAVKLGKSSLQILPPLFANKEDGSYSEEILTMF EK >gi|224531372|gb|GG658180.1| GENE 323 327992 - 329137 1706 381 aa, chain + ## HITS:1 COG:FN0783 KEGG:ns NR:ns ## COG: FN0783 COG1960 # Protein_GI_number: 19704118 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 381 1 381 381 657 86.0 0 MEFNIPKTHELFRQMIREFVEKEVKPLATELDEEERFPVETVKKMAEIGIMGIPIPTQYG GAGGDNLMYAMAVEELSRACGTTGVVVSAHTSLGSWPILKFGTEAQKQKYLPKMASGEWI GAFGLTEPNAGTDASGQQTTAVFDEEKQEWIINGSKIFITNAGYAHVYVVFAMTDKSKGV KGISAFIIESGTPGFSIGKKEKKLGIRGSATCELIFEDVRIPKENLLGDLGKGFKIAMMT LDGGRIGIASQALGLAQGALDEAVQYVKERKQFGRALSKFQNTAFQLANMEVKVEASRLL VYKAAWNESNHLPYTVDAARAKLFAAETAMEVTTKAVQLFGGYGYTREYPVERMMRDAKI TEIYEGTSEVQRMVISGNLLK >gi|224531372|gb|GG658180.1| GENE 324 329175 - 329972 1098 265 aa, chain + ## HITS:1 COG:FN0784 KEGG:ns NR:ns ## COG: FN0784 COG2086 # Protein_GI_number: 19704119 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Fusobacterium nucleatum # 1 265 1 262 262 385 78.0 1e-107 MKIVVCIKQVPDTTEIKLDPVKGTLIRDGVPSIMNPDDKAGLEEALKLKDLYGAKVTVVT MGPPQAEAILREAYAMGVDNAILITDRKFGGADTLATSNTIAAAIKKIVNEDGCDLIIAG RQAIDGDTAQVGPQIAEHLGLPQVSYVKEMKYDEADKSLTIKRVVEDGYYLLKVSTPALV TVLAEANQPRYMRVKGIVEAFDKPITTWGFADIDIDEKIIGLAGSPTKVKKSFTKGAKAA GEVFEVEAKEAAQMILEKLKEKFVI >gi|224531372|gb|GG658180.1| GENE 325 330005 - 331015 1366 336 aa, chain + ## HITS:1 COG:FN0785 KEGG:ns NR:ns ## COG: FN0785 COG2025 # Protein_GI_number: 19704120 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Fusobacterium nucleatum # 1 336 1 391 391 474 66.0 1e-134 MNLIDYKGILVFAEQRDGKIQNVALELIGKARELAESIDTKTVSAVLIGENIKGLAQELI HYGADVVYVVDGAEYKVYDTEKFAQVFKALINDKKPEIVLFGATTIGRDLAPRVSSRMTT GLTADCTRLEIAEDKSLWMTRPAFGGNLMATIVCPDHRPQMSTVRPGVMKKRNKEEDRKG EIVDYPVTLDMSKCKVQVLEVVKEEGNTVDISEAKILVSGGRGVGHKANFQELEDLAAEV GGIVSASRAQVDAGNISHDRQVGQTGKTVRPFVYFACGISGAIQHVAGMEESEYIIAINK DKYAPIFSVADLGIVGDVHKVLPLLTEEIRKFKAAK >gi|224531372|gb|GG658180.1| GENE 326 331608 - 333416 2558 602 aa, chain + ## HITS:1 COG:FN0452 KEGG:ns NR:ns ## COG: FN0452 COG0449 # Protein_GI_number: 19703787 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Fusobacterium nucleatum # 1 602 1 607 607 641 57.0 0 MCGIVGYSGNETKAKEVILSGLEKLEYRGYDSAGIAIVMENQELFIEKKKGKLAVLKEYV EKDSKLEGKIGIGHTRWATHGIPTDENAHPHYGQNKKVAVVHNGIIENYWKIKEELVKEG VQFSSDTDTEVVAQLFEKLYQGDLLEATLLLLEKIKGSYALGMIHQAEPTRLVCCKKESP LVIGIGETASYIASDATALLKYTKNFIYLEDGDIAILEGNQVKLYDRLGKEITREVVYVD ASPEQVSKQGYEHFMLKEMEEQGDIIEKTLGVYVNEEGNVNFQKQVAGISLENFHKIYVV ACGTAYHAGLQLQYFMKHLCQKEIIVDIASEFRHDPPFLDEKTLVIVISQSGETYDTLMA LRQAKLQGAMTLAICNVLGSTIAREADRVIYTLAGPEISVASTKAYTAQVVLLYLLTLYF SGKNEKELDDAYQLSEKFKHIFDKKEEIKRVSEKIAKSKDIFYLGRGLDEKIAREGSLKL KEITYIHSESFPIGELKHGSIALIEEGVPVVLLSTRKEWSEKSSSNLKEVKSRGAYVIAI AVEGSDEVKAGADEYIEIEDAGIYLTALLAVVKMQLLAYYVAVAKGLDVDKPRNLAKSVT VE >gi|224531372|gb|GG658180.1| GENE 327 333436 - 335193 2096 585 aa, chain + ## HITS:1 COG:FN0453 KEGG:ns NR:ns ## COG: FN0453 COG0006 # Protein_GI_number: 19703788 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Fusobacterium nucleatum # 1 585 1 584 584 641 55.0 0 MKNQEKIGWVQSKMKDSDIAAYIVPTADYHQSEYLGEYFKARAFLSGFTGSAGTLVILSE EAYLWTDGRYYVQAEKQLEGSGIHLMKQGMPGIPNYIEFLRGKLAKKEKIGMDMKVFVTS DILKLQKDFECKDVGDLTIEIWKDRPNLPKDTIFIHEEKYHGEASPLKIAKIREDLSQHS LDYQLIATLDDIAWIFNLRGKDIEDNPVFLSFALISQEDVVLYCDKEKISDTVASYLREI GVEWKEYFAIFEDLSKLEGRIGMEFESSSYALYSSILEKKNIVNHQPKSSFLKTIKTEVE LENTKKIHILDGVAVTKFMYWLKHHYQTENMTEYSAEKYLDSLRAQIEHFQELSFHTIAG FGSNAAMMHYQASPEKEVVLKEGALFLVDSGGQYLEGTTDITRTFALGEVPEEQKRHFTL TLKGMIDLSKAKFMHGATGTNLDILARQHLWNIGIDYKCGTGHGVGHFLGVHDGLHGIRF QYNAQRLEENMVVTNEPGVYIAGSHGIRIENELVVRPYLETEHGKFLQFETITFAPIDLD AILPELLSVEEKEWLNQYHKDVYTKISPFLNEKEKEWLKIYTRSI >gi|224531372|gb|GG658180.1| GENE 328 335206 - 335679 659 157 aa, chain + ## HITS:1 COG:no KEGG:FN1219 NR:ns ## KEGG: FN1219 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 150 4 151 151 132 46.0 6e-30 MPLYIKVLTDYYHFLIGDLEEKRKVFLMELLKYLLLKDEYGYDPFLEGETERVVFLLRCI QQEEVPMSFESYVKLQKWHRKDAWSDGELQEYFLHQRKGKEVKIMFDFDNASSEEIEILS YLNRFLEGKGRKFQVLNIHNARYVDVSELLEELRNKQ >gi|224531372|gb|GG658180.1| GENE 329 335709 - 336332 850 207 aa, chain - ## HITS:1 COG:lin1978 KEGG:ns NR:ns ## COG: lin1978 COG1272 # Protein_GI_number: 16801044 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Listeria innocua # 7 207 10 210 210 148 44.0 6e-36 MTLDRIEEHWNAWTHYIGSLAAIVALVLLIIRALQISNFLYLGTVIVFGIALISLYSISG TYHILKPGKAKNIFHILDHIGIYFLIAASYTPYIFMGLTGPKKWIIFGVQWGITLLGIFF KIFFTGKFQVLSTMLYLAMGWTIVFVFRDIYHSLSPLSFRFLLASGIVYSVGTIPFLLDN IRFSHAVWHIFVLAGSTLGFLSIFFLV >gi|224531372|gb|GG658180.1| GENE 330 336406 - 338481 2196 691 aa, chain - ## HITS:1 COG:CAC2241 KEGG:ns NR:ns ## COG: CAC2241 COG2217 # Protein_GI_number: 15895509 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 4 684 8 693 699 519 42.0 1e-147 MKTREYSVKNLHCSGCSAVIQGMILKLPGIIGVNIDIYEEKIMLQYEDSIEDSSLLEKIN EIGNRIEPGTLFYHEEESLEEEDEKKNFYIKVGSFVGMIFFLLIALLFSNNHVQFFCYLI SYFFISGDILWKASKNLGRGKILDENFLMSIASLGAIYLGEYHEAIGVMFFYKIGEILEE KAVLTSKKSISSLLKLRPEVAFQKQKDGSFQEVPSSSLHVGDIIQVKEGEKIPVDGKIIK GESFLDVSALTGEVIPMDVKVGDTVLSGSINGDRILELKVVRKFSDSTISKIIDMVEHAN TKKSKVEKFMSKFARYYTPIVVSLALIVGLILPFFLGNFKIWFERAILFLVISCPCALVI SIPLTFFHNIGRASKQGILVKGANYLEAVLDIKNIVFDKTGTLTKAKFQIKKIVGENKEL LQELAKAGEFYSKHPIGMAIYESIPLAIEEKDIQNYKNIPGYGVRLEYKGKEVFLGKETY LLEQGISYPKIEKTGSIVFILLEGTYQGYIVVEDEIKEESTHTISQLQKLGFIPYILTGD GKEIGESVGKQLGINSKNIFTNLLPEQKVKTLKKIQESGKTLYIGDGINDAPVLASSDIG ISMGNMGSDVAIEASDIVFMDDHIEKLLLLLALAKQNRRTLYTCITFALGIKILVMILGI LGIANMWFAIFSDVGVTLLCILYSSFSFHRS >gi|224531372|gb|GG658180.1| GENE 331 338611 - 339828 1455 405 aa, chain - ## HITS:1 COG:CAC1001 KEGG:ns NR:ns ## COG: CAC1001 COG0436 # Protein_GI_number: 15894288 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Clostridium acetobutylicum # 1 396 1 395 395 541 64.0 1e-154 MKISKRAEEMGYSPIRKLIPYADEAEKRGVKVYKLNIGQPNIVTPDSFFEGLHSYKEKIV KYSDSRGIPSLLESFVRSYRQSGIELEKEDILITQGGSEAIFFTLMAICDEGDEVLVPEP FYSNYSSFSRFAGAKVVPISTSIETGFHLPKKEEIEALITPKTKAIMFSNPVNPTGTVFT EKEIRMIGELAIEHDLYIIGDEVYRQFVYDDETEFLSVMKLDHLQDRVVIVDSISKHYSA CGARIGLVASKNHELMAQILKFCQARLCVSTIEQHSAANLINTMNSYFEDVKLKYKNRRD LLFSYLSRIPGVVCSRPEGAFYIIAKLPVDDSEKFAKWLLTDYSYENMTLLIAPGPGFYM TPGKGKQEVRFSFCTNVDDIENAMIVLKRALVEYQRLFLAEKEAQ >gi|224531372|gb|GG658180.1| GENE 332 339880 - 341223 1494 447 aa, chain - ## HITS:1 COG:FN0162 KEGG:ns NR:ns ## COG: FN0162 COG0534 # Protein_GI_number: 19703507 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 10 446 10 446 446 509 62.0 1e-144 MLLFKSKQNKKFFALALPIFLELTLVNVVGNIDTIMLGRFSDEAVGAVGGITQALNIQNV LFGFISLGTGILVAQYVGAKNYKKMKEVISTSLFLNFIFSFLLALLYILFWRQIFNFMKL PEELVNIGKYYFLLLSSFCAFQALTLTSGAILKSYGKPKLMLFVNVGVNLLNILGNGMFL FGWLGMPILGTLGVGISTVFSRAIGCIFAIYLVKKHCHFQFSKKYFQPFPWKIIQNLLSI GIPTAGENLAWNIGQLLILSMINALGTNYIAARTYLMLITMFIMVFSISLGHATAIQIGQ LVGAKKWNQAYLRGFSSLKLSFILAIITSSTVFLLRVPIMSIFTQNEEILKISYQVFPYF ILLESGRVFNIVIINALHASGDILPPMIVGIIFVFLVAVPFSYLFGIKFAWGLVGIWIAN AMDEWIRGFAVLYRWKTQKWKTKSFIS >gi|224531372|gb|GG658180.1| GENE 333 341233 - 342054 987 273 aa, chain - ## HITS:1 COG:FN1702 KEGG:ns NR:ns ## COG: FN1702 COG1968 # Protein_GI_number: 19705023 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Fusobacterium nucleatum # 6 259 1 254 266 279 61.0 4e-75 MNPFFIIIILAVIEGLTEFLPVSSTGHMILANFFFGQNTFREEFMNHFLIIVQLGAILAV IVFFWKKVNPFVKSKEEFKKRFQLWSKVIVGVFPAAIIGLIFDDYIEQHFMNNIYIVIFT LIFYGIALMGIEHHHKKTAMKVRYASFRKMHYRTALYIGFFQCLAMIPGTSRSGATIIGA LLLGVSRPLATEFSFYLAIPTMFGATLLKLLKTNIVYTTQEWYYLGIGTFIAFLVAYIVI SWFMNYIQKRDFTLFGWYRILLGIIVLVIYLLG >gi|224531372|gb|GG658180.1| GENE 334 342067 - 343065 1607 332 aa, chain - ## HITS:1 COG:FN1703 KEGG:ns NR:ns ## COG: FN1703 COG0451 # Protein_GI_number: 19705024 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Fusobacterium nucleatum # 1 332 1 332 332 481 69.0 1e-136 MIVVTGAAGMIGSAVVWKLNEMGINDILLVDKLRNEDKWLNIRKRDYRDWMDRDVFLDWL FQEAEANEITAIVHMGACSATTETDGDYLMSNNYAYTKALWEYCSQRNIRFIYASSAATY GAGEQGYHDMVSPEELKALKPLNKYGYSKKRFDDWAFKQKSHPSIWAGLKFFNVYGPQEY HKGRMASMVFHSFRQYKETGKVKLFQSHKEGYEDGGQLRDFVYVKDVVDIIYYMLTQDFE SGIYNIGTGQARSFLDLAMATIKAAAGREDIQVSDVIEFIPMPEDLRGKYQYFTQAQMEK LGNTTYHLHMHSLEEGVKDYVQNYLSQEDAYL >gi|224531372|gb|GG658180.1| GENE 335 343068 - 343886 869 272 aa, chain - ## HITS:1 COG:BH2283 KEGG:ns NR:ns ## COG: BH2283 COG0613 # Protein_GI_number: 15614846 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Bacillus halodurans # 4 248 8 255 290 151 34.0 1e-36 MKVDLHLHSTASDGSFSPKQIVQLALLKKMKAIALTDHDTIDGLYEAKQEAEKWGIEFVS GIEFSTYWKNYEVHILGYFLNLEDSNFITTIHELKILREERNKKIIQLLQNYGIILDMTS LEKQYPKQSIGRVHIAKEIIKNGYVKDMQEAFSKYLAQGGLAYVPKEGLSPHKAIQILKE NAAFSSLAHPKFISKNENEILQLIEELKEVGLDAIEANYAGFKSYEIRKYRSWAKKYNLF ITGGSDFHGTNRKNVEIGMQGLDYSQFNKFRR >gi|224531372|gb|GG658180.1| GENE 336 343947 - 344687 832 246 aa, chain - ## HITS:1 COG:no KEGG:FN1719 NR:ns ## KEGG: FN1719 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 246 1 239 239 217 47.0 4e-55 MKKLFMISALSIMLVACGGAVKEKDLVQKYQLTPNSAVHWDQTIMHIIPAEAKIADWYGN ENPINYLQKTGRMNEKDFNFLVSLSQKKAEQVSKEEYEQFLDLLTSYVNTLPRKFFLSNT NIKDPKGLVKLMVRESNSTLDNPSRYIKETIASPEEWQQIVKFSSQDDLKEKDVKKLRKI LNSFLKDPELYSPEVWYRREVSDRMLELTKMQQAGNLTKMQQNNINAKALYLAYPEYFSK LDKWDK >gi|224531372|gb|GG658180.1| GENE 337 344706 - 347375 3362 889 aa, chain - ## HITS:1 COG:FN1718 KEGG:ns NR:ns ## COG: FN1718 COG0653 # Protein_GI_number: 19705039 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Fusobacterium nucleatum # 1 886 1 869 869 1232 73.0 0 MIANLLKAIFGTKNEREVKRIQKIVAKINALSDEYSSLSDEELKGKTVIFKERLQNGETL DDILVEAFATVREASSRVLGLRHYDVQLIGGIVLHEGKITEMKTGEGKTLVATAPVYLNA LSGRGVHVITVNDYLATRDREMMGRVYSFLGLTSGVIVNGMYGKDRREAYQCDITYGTNS EFGFDYLRDNMVASVGEKVQRELNYCIVDEVDSILIDEARTPLIISGASSDAIKWYQVAY QVVSLLNRSYETEKIKNIKEKKEMNIPDEKWGDYEVDEKAKNIVLTEKGVSKVEKLLKLD NLYSPENVEITHYINQALKAKELFKRDRDYLVRDTGEVVIIDEFTGRAMEGRRYSDGLHQ AIEAKEAVRIAGENQTLATITLQNYFRMYQKLSGMTGTAETEATEFVHTYGLEVVVIPTN EPVIRKDHSDLVYKTKEEKLEAIIDKIEELYKKGQPVLVGTVSIQSSEELSDLIKKKGIP HNVLNAKYHAQEAEIVAQAGRKGSVTIATNMAGRGTDIMLGGNPEFLAIHEAGSRDAENY SEILSKYVKQCEEERKEVLALGGLYILGTERHESRRIDNQLRGRSGRQGDPGESQFFLSL EDDLMRLFGSDRVKAVMEKLGLPHGEPITHKMINKAIENAQTKIESRNFGIRKNLLEFDD VMNKQRTAIYESRNEALVKEDLKSNILSMLHDVIYTKTFQHLVGEVKEDWDIQGLAKYLA ERFDYIIEDEKEYMSMNVEDYAALLYDRLSAVYEEKENRMGSEIMRKIEKYILFEVVDAR WREHLKALDGLREGIYLRAYGQKNPVTEYKLVSSEIYEKMLETIQEEITSFLFKIVIKTE ENEKIEEETPKKAEKIQFIPKNQQELTPEDECPCGSGKKYKNCCGRIKK >gi|224531372|gb|GG658180.1| GENE 338 347432 - 349462 2056 676 aa, chain - ## HITS:1 COG:FN1717 KEGG:ns NR:ns ## COG: FN1717 COG0272 # Protein_GI_number: 19705038 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Fusobacterium nucleatum # 13 673 33 695 696 734 62.0 0 MISKKEKENRREELQKKLQRYSDAYYSQNESLISDYEYDMLLKELENLEAELQIQNKDSI TQTVGSSLKNSKFQKIAHKTPMLSLSNTYQIGEIEDFLLRAKKNLNMTDNLEVEMEIKLD GLSISIIYEKGKLVRAVTRGDGIVGEDVTENVLQIESIPHELSEAFDIEIRGEIVLPFSE FENLNKIRIEKGEEVFANPRNAASGTLRQLDPKIVKERHLAAYFYFIVNAEQYGIHSQKD SIAFLEKLSLPTTGICEIFHNLSDLENRIEHWSKERENLAYETDGLVLKINNISLWEKLG STGKSPRWAVAYKFPAKQVTTKLLDITWQVGRTGKITPVAELEEVELSGSRVKRASLHNY DEIVRKDIRIGDTVFIEKAAEIIPQVVKSVKQDRTGEEKEIEAPAHCPICNSVLEREQGL VDLKCINKHCPGKIQGEMEYFVSRDGMNISGLGGKILEKFLDLHYLEDVSDIYYLKERKE ELEQLDKMGKKSIENLLNSIEESKKTSYDKVLYALGIPFVGKVAAKLLAKESKNIFKLQT MTEEELQQIEGIGEKMARSIVDFFQNEVKKQLIQNLIDIGLCFTLKDGVEASTEAKIWQG KTFLVTGTLSKYTRAELQEDIEKSGGTNLSSVTKKLDYLIVGEKAGSKLEKAKALGSVTI LTEEDFLALKEKLTKQ >gi|224531372|gb|GG658180.1| GENE 339 349459 - 350496 884 345 aa, chain - ## HITS:1 COG:FN1920 KEGG:ns NR:ns ## COG: FN1920 COG0482 # Protein_GI_number: 19705225 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Fusobacterium nucleatum # 3 344 2 342 343 355 52.0 7e-98 MKEKVILGMSGGVDSAVAAYLLQKNGYDVIAVHFSVHKTERTQEEVKDSQTIANQFSIPL YSYCLEKEFQEKIISYYLTEIEKGRTPSPCPLCDDSVKFHLLFQEAEKHGAKYVATGHYA SISSNNVFKTSLLEANHHIHKDQCYMLYRLSSEKLKRILFPLSSLEKSEVREIARKIGLF VSEKKDSQGICFAPEGYQAFLKKHLAHKIQKGNFIDEKGNILGKHSGYPLYTLGQRRGLG IQMKEISFITKINPDTNEITLGKFDNLLEDKVILENTIFHLPLETLKNMTLLARPRFSST GFLGKVREENGVVTFHYFEKNAHNASGQHLVLFYENYVVGGGIIA >gi|224531372|gb|GG658180.1| GENE 340 350506 - 351780 1242 424 aa, chain - ## HITS:1 COG:FN1924 KEGG:ns NR:ns ## COG: FN1924 COG1055 # Protein_GI_number: 19705229 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Fusobacterium nucleatum # 1 424 1 424 425 556 76.0 1e-158 MLLILGILIFVLVFYCIITEKVPSCYATMLGALIMSFCGIITEEEILQTIHSRLDILLLL IGMMMIVSFISETGLFQWFAIKVVKLVRGEPLLLLTLLSLITAISSAFLDNVTTILLMAP ISILLAKQLQLDPFPFVMTEVLSSDIGGMATLIGDPTQLIIGSEGHLSFNEFLWNTAPMT IIALTILLVSVYFLYIRKMKVPRELRAQIMELESSRILKNKKLLTQSLFVLILVILGFVS NNFVNKGLSVIALSGAFVLAFISKRNPKEIFEKIEWDTLFFFIGLFAMIRGIENLGIINV MGEKILEISTGNFHFATLSVMWFSSLCTSILGNVANAATFSKIIQTLLPNFENIQNTKAF WWALSFGSCLGGSITMIGSATNIVAVATAKKSGCKIDFITFMKFGCRIAIINLIVASLYL YLRY >gi|224531372|gb|GG658180.1| GENE 341 351809 - 353086 1153 425 aa, chain - ## HITS:1 COG:FN1925 KEGG:ns NR:ns ## COG: FN1925 COG1055 # Protein_GI_number: 19705230 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Fusobacterium nucleatum # 2 425 1 424 424 556 75.0 1e-158 MLLILALCIFIAVFYCIITEKIPTPWATMLGGLTMSLLGIINQEEALEAISERLEILFLL IGMMMIVLLISETGIFQWFAIKVAQLVRGEPFSLIILLCTITALCSAFLDNVTTILLMAP VSILLAKQLKLDPFPFVISEVMAANIGGLATLIGDPTQLIIGAEGNLNFNQFLMNTAPVS ILSMISLLFTVYFMYGRKMQVSHELKARIMELDSSRSLKEPTLLKLAGSIFALVILGFIL NNFINKGLAIISLAGAFYLVVLAKRKPKEIFENLEWETLFFFIGLFMMIKGIEELNVMEI IGQQLVHITEGNFPLAMFSITWISAIFTSIIGNVANAATMSKIIQVMIPSFNSLGDTSHF WWALSFGSCLGGNISLLGSATNVVAVGAATKAGCKIDFVKFLKFGSIIALENLIIASLYI FFRYL >gi|224531372|gb|GG658180.1| GENE 342 353101 - 354030 1392 309 aa, chain - ## HITS:1 COG:FN1926_2 KEGG:ns NR:ns ## COG: FN1926_2 COG0517 # Protein_GI_number: 19705231 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Fusobacterium nucleatum # 147 309 3 167 167 197 63.0 2e-50 MKFASYLHPQLIFMDIQKETKQEVIQEMIHRIAAKDSTVREKENIIEEMVLKRENEISTC IGEGVAIPHARIENFGDFVVAIAILEKPILGEIGASNKFDEVNVVFLIISDVLKNKNILK VMSAISKIVMKNPMVFDKIKTEKNPSKIIDYIEETGIEISHKIVAEDVLSPDIIPVHPED TLENVAKRFILEQKTGLPVVDSDGTFLGEITERELIDYGMPDYLSLMGDLNFLTVGEPFE EYLIHEQTTSIENLYRKDKKMIKIDRKTPIMEICFIMVYKGINRLYVIDHGKYCGMITRS DIIKKVLHI >gi|224531372|gb|GG658180.1| GENE 343 354089 - 356614 3176 841 aa, chain - ## HITS:1 COG:FN1927_1 KEGG:ns NR:ns ## COG: FN1927_1 COG1461 # Protein_GI_number: 19705232 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 1 555 1 560 560 677 65.0 0 MKIEIKSLNAVRLTKLFIAASRWLSKYADVLNDLNVYPVPDGDTGTNMSMTLQAVENELV KLDHEPNMKELSEIVSENILLGARGNSGTILSQIIQGFLSVVENTEEISIDVAARAFMAA KDKAYQAVNQPVEGTILTVIRKVAEAAMVYQGPQDDFILFLVHLKNIAHEAVENTPNELA KLKEAGVVDAGGKGIFYVLEGFEKSVTDPEMLKDLARIAKAKTVKRDKMEFAQEEDIAFK YCTEFIIESGSFPLEEYKAKIAPLGDSMVCAQTAKKTKTHLHTNHPGEVLEIAAALGNLN NIKIENMLIQHRNLLVTEAELSQVSGTVNPKEETFLLRSENATPIAYFAVVDNVELGNRF LDDGATAVLIGGQTKNPSVADIENGLKKIHSKTIILLPNNKNIISSAKMAAERSDKEVIV FETKSMLEGHYVVKHKEESMDILLQQLGRNYSIEITKASRNTKVEELEIEKEDCIALVNG RIVEKAKNNAELIEKLYTRYLDRNSLSIFAVLGKEREEEGMKALKQHSSRIKYQEFEGNQ ENYPYYIYVEQRDPNLPRIAIVTDSASDLTPELMNGYDIHIIPLRLKIGDKNYDDGITIT RKEFWNKILREKVLPKTSQPSPAEFHKVYQNLFDKGYESVITILLSSKLSGTQQAAKIAK EMMGNDKDIYIVDSKAVTFAEAHQVLEAAKLVKEGATTKEVLERLYELQDQMKLYFAVND ITYLQKGGRIGRASSIIGGLLKVKPILKLEDGEVTLETKVIGERGALSYMEKLIKNEGKK NSIILYTAWGGGNQELHNADVLKKMSEDSRKIEHRGRFEIGPTIGSHSGPVYGFGMISKI R >gi|224531372|gb|GG658180.1| GENE 344 356633 - 357181 564 182 aa, chain - ## HITS:1 COG:FN1928 KEGG:ns NR:ns ## COG: FN1928 COG1396 # Protein_GI_number: 19705233 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 1 182 1 184 184 228 70.0 4e-60 MSIGEKIKKSRNEKSLSLRELAVKVDLSASFLSQIEQGKASPSIENLKKIATALDVRVSY LIEDDEIQKNVDFVKKENVKYIESRDSNTKMALLTVSNDEKTMEPILYEIGPGGESGRNS YSHSGEEFIYITQGELEIYINDSMYKLKEGDSLYFKSNQQHRFKNSTKKETKAIWVVSPP GF >gi|224531372|gb|GG658180.1| GENE 345 357185 - 358393 239 402 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 263 389 765 895 904 96 40 1e-18 MKAACILVGTELLNGAMVDTNSIYMAEELNKVGIELPYKMIVRDIKEEIIDAIQYFHSRV DIIIMSGGLGPTLDDITKDAIADFLGKKLIVDPEELKVLHQKFASRGLPILEMNTKEVEK PEGAISFENSVGMAPAIYIDKIAAFPGVPRELYDMFPKFLSYFIKEKNWKHKIYIKDIIT YGIPESVLENHVKDCFQEEGIFYEFLVKNYGILIRMQADAMKKNKVEKIKEKIYNIIGDF IIGEDSVKIEEKIVQYLKEKQWKISLAESCTGGLIADHFVRLAGVSEVFYEGIVSYDNEA KKKRLGVQKQTLDNDGAVSENTAREMLLGLSTEVAISTTGIAGPGGGSNEKPVGLVYIGI RVLDKTYVIKKIFHGNRQQIRQRTVLEALVSLFQILTKGCEM >gi|224531372|gb|GG658180.1| GENE 346 358405 - 358908 731 167 aa, chain - ## HITS:1 COG:FN1930 KEGG:ns NR:ns ## COG: FN1930 COG1267 # Protein_GI_number: 19705235 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Fusobacterium nucleatum # 6 167 9 170 171 209 70.0 2e-54 MDKRLKTIRNLATWFGLGDLPKAPGTFGTLGAIPLYILLCYLRKIFPNTMIYNSFYFMFL MTFFAISVYVADICEQEIFKKEDPQAVVIDEVLGYLTTLAFINPIGISQTLWAIGLAFLI FRFFDITKLGPIDKSQHLKMGIGVVMDDFLAGIIGNFLLVCLWTIFF >gi|224531372|gb|GG658180.1| GENE 347 358912 - 361080 2529 722 aa, chain - ## HITS:1 COG:FN1931 KEGG:ns NR:ns ## COG: FN1931 COG0826 # Protein_GI_number: 19705236 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Fusobacterium nucleatum # 1 722 1 720 720 674 50.0 0 MKIVAPAGNKERLYAAIKAGAEEIYMGLQGFGARRSAENFTVEEFIEALDYAHLRGSRIF LTLNTLMFKEEIEFLYCNLKKLYEHGLDAVIVQDLGLANYLHQNFPDLELHGSTQLSVAN HVEINFLQSIGFTRVVLPRELTFEEIKSIREHTTIELEVFVSGALCICYSGNCYLSSFLG GRSGNRGMCAQPCRKNYQINQENKSYFLSPKDQFLGEEEIQKLKAIGIDSIKLEGRMKEP NYVFTTVQYYRNLIDDIATKERSSSLFNRGYSKGYFYEKTSEIMNPLFSSNLGERIGIIQ GKEIRLEKDVILGDGFSYVSSSFEKLGGCYLNQIIIKGNKEKRKKAFKGEILILKDVSRG SKYLYRSYSKEIQDSIEVEKKQQDKRKEILASFIGEIGEKAKLCIHTKNEWGKEITLSVF SEENLQNANKKATTKEEVFQKISELGNTSFYLKNIEIELEENIFIPASLLKSLKRFAIEK LEKKLLESYLRIAPKEWKLSSIPNEKIDDLDFFFIVRTEKQKQYLEDKGYSNIFYRSYDI ASEGELEKQNLDTLVAANFYQILKNRNTSGIIGNWNLNISNPYTFELLERLPQLDLLMLS PEMSFEKMKNIGATKQKKAILAYSKLRGMYIELDLIKGKNTILQNQENDNFHLKTNALGH TEVYLEEALNILSKQNLIKELGISVIIIEFTYETLQEIDLVLQELREKKGRYKAYNYERG VY >gi|224531372|gb|GG658180.1| GENE 348 361052 - 361654 487 200 aa, chain - ## HITS:1 COG:FN1932 KEGG:ns NR:ns ## COG: FN1932 COG0237 # Protein_GI_number: 19705237 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Fusobacterium nucleatum # 1 190 4 192 193 157 47.0 1e-38 MIIGITGTIASGKSTVSDYFIKQGYVVIDADKITKELQEQKEVLKEFLEIFGESVLLENR SLNRQKLREIVFQDKTALQKINRIMHPKVREKFEDVRSRTLKEEIVFFDIPLLFEAHFED LCEKIILVCAEREVQIRRVIQRDNSSRELAEKIINSQAKEEEKRKKSDYIIENNGTVEEL YQKLKKWEETFNENCRSSRK >gi|224531372|gb|GG658180.1| GENE 349 361801 - 362769 903 322 aa, chain + ## HITS:1 COG:no KEGG:CLB_1618 NR:ns ## KEGG: CLB_1618 # Name: not_defined # Def: AraC family transcriptional regulator # Organism: C.botulinum_A_ATCC19397 # Pathway: not_defined # 3 317 4 323 329 123 28.0 1e-26 MRKENFIEKYFERLSRIENLTKITDLFGIRYVFPNSHGKYWFYRLAIEEGMDITFTSLPN RLNYAFQIVNWDEEVLEFGVCTEGKMEILCYPSLERYSYQQGQACLYYSKNSVEKFEFYT KYYKGFSIHLHLDYFEYFFKLGKSSWLEKEWRNNLKNMLQEKFLKIWNSSIFLQALAKEI ADFKIKSILDYFEFKGKINYFLVKLMLECMGISDSEDEKIQHLTFLIAQDYEKIYSLQEI SRFLDTPIYQLQKMMKKKKGITICQYIRNLKLEYAKILLEKNDYTVAEVASMIGYSNPSK FSKIFFERYQKKPKKFKNNKIY >gi|224531372|gb|GG658180.1| GENE 350 362911 - 364656 196 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 354 559 41 252 329 80 30 1e-13 MKIYQKLKLYAGEKIGYAYCSIFLSFLASLFLLLPYWLLWGFLKELVLVQNIKNVRYYAT WIVIFMMIYGIFYFLSLWCSHLLAFRLETNLRKEGIKHLLNASFSFFEKNSSGKIRKLID DNASETHTIVAHLLPDLVGTALLPLGMVIIFFRIDIILGCSLLFMIGIGIWQLKDMMGEQ EFMKTYMISLEKMNAEAVEYVRGMQVIKIFNTTIQSFKAFYDAILSYSNYALHYSMSCRR AYVWFQVLFHLFITFPLPIAILFMRHGANEKLVLIKIIFYVIFAGLLFLAFMRVMYVGMY HFQALEVISKLEALFDEMERNNVTYGKLEQANHFDLEFKKVSFCYEEQYVCKELSFQLKE KKTYALVGSSGGGKSTIAKLLSGFYSVQEGEILLGGKNIKEYSETFLSKHIAFVFQNSKL WKKTIFENVKMGREDASYEEVMKALEKAQCEDILNKFEERENTLIGAKGVYLSGGEIQRI AIARAILKNADIVILDEASAAADPENEYELQRAFSNLMKDKTVIMIAHRLSSIQNVDEIL VIDQGSIIERGNHKELMANKSRYADLQKFFSEANDWRIEND >gi|224531372|gb|GG658180.1| GENE 351 364649 - 366367 1548 572 aa, chain + ## HITS:1 COG:SP1435 KEGG:ns NR:ns ## COG: SP1435 COG1132 # Protein_GI_number: 15901287 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Streptococcus pneumoniae TIGR4 # 5 572 14 581 581 547 50.0 1e-155 MIKEKHFLGLTTQGKKDLIRASFSSFFMHFAYMAPIMLIFFFSESVLQGKEASPMIYGLG ILVLCFVMYLLIFYNYNTLYNATFQESANLRIHLADTLKNLPLSYYSKHNTSDLSQTIMK DVADMEHAMSHAIPQTFGFILYIIVISILMLLENVVLTLCILVPILLSFFLLILSKKMQI SSSTKYYKQLRENSEFFQESIEMQQEIKSYGQKEKVQQELMKQIEESETLHKKAELSQAF PVVFAQSILKFILGLTVFIGAKLYVEGEVSLLYLLGYLIAASKIMDGMNGLYLNLAEMMS LDARIQRIQEIQQVKRQEGKEIELSSYDIIFQKVSFSYRSDCKVIDKVSFVAKQNEVTAI VGASGCGKTTLLRLISRLYDYDEGKIFVGGKEIVDIDINHFFKNISIVFQEVLLFNTSIM ENIRIGKKSATDEEVIQAAKLANCDEFVSRFPKGYQTIIGENGSKLSGGERQRISIARAI LKDAPIVLLDEISASLDIENERKIQESLKRLLKHKTVIVISHRMKSIEKADNIIVMNEGK IEKIGKHKELLKSSSIYKNMIKKSEFAENYVY >gi|224531372|gb|GG658180.1| GENE 352 366420 - 367274 898 284 aa, chain - ## HITS:1 COG:FN0789 KEGG:ns NR:ns ## COG: FN0789 COG1284 # Protein_GI_number: 19704124 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 277 1 277 280 259 50.0 3e-69 MKKKTLFVIKDYILISFACALMGFTINYFYISNKLAEGGVSGICLILHYLSNIPISYLYL GLNIPLLIIAWKFLGRDFSMKTIYATVLLSFFMDFFSYLRTPIPDFLLASLFGGALTGIS LGLIFISGGSTGGTDIIAKLITRYRGVSVGKALLAMDFVILSLVAFLFGKLIFMYTLIAV TVSSKIIDFIQEGMDEAKAIFIMTSKPQELKTAISKKINRGVTFLDGEGGFSGEKLKVLY CVISKYQLVNLKRTVRQLDPNAFLTITNVHEVLGEGFKHLNTEE >gi|224531372|gb|GG658180.1| GENE 353 368805 - 368996 296 63 aa, chain + ## HITS:1 COG:no KEGG:Mmol_1121 NR:ns ## KEGG: Mmol_1121 # Name: not_defined # Def: hypothetical protein # Organism: M.mobilis # Pathway: not_defined # 5 60 2 57 58 63 50.0 2e-09 MKNTFWKNKKNKKTYKILEEAVDCTNIRDGVKVFIYQPIDKKESYFVREQEEFFQKFEKI SQE >gi|224531372|gb|GG658180.1| GENE 354 369102 - 369380 451 92 aa, chain + ## HITS:1 COG:PA1749 KEGG:ns NR:ns ## COG: PA1749 COG2388 # Protein_GI_number: 15596946 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Pseudomonas aeruginosa # 25 85 92 152 161 59 44.0 1e-09 MDKIVLVETEKSGSFEIRENNIVLAELNFNKLENGVIDAYHTFVDSSLRGQGVAEKLYLE LIQYAKEKGYKIIPTCSYIGRRIQKDLDLIKK >gi|224531372|gb|GG658180.1| GENE 355 369534 - 371075 2101 513 aa, chain + ## HITS:1 COG:FN0470 KEGG:ns NR:ns ## COG: FN0470 COG2978 # Protein_GI_number: 19703805 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Fusobacterium nucleatum # 4 513 3 511 512 669 71.0 0 MEVKQKKSFMNSFLDFIEAGGNKLPHPLTLFFILCIIIVIISGIAAKMGASVTYTALDRK TLEISEQTLEVKSLMSAEGIRYIFNSMVTNFTGFAPLGTVLVALIGIGVCEASGLMSATL RKVVTSTPRKAITAVVVLAGVMSNIASDAGYVVLVPLGALIFLSFGRHPLAGLAAAFAGV SGGFSANLLLSTTDPLLSGLTTEAARLMRPDYFVNPASNYYFMFVSTFIITILGTIITEK LVEPRLGKYEGEMVDSHEGELSDLERKGLRYAGLSVILYIAIMLILMLPENAILREDGLL KSFTSHGLVPALMLFFLIPGLVYGITTKKITSDKEVAKMMGKSLGTMGGYLALVFVSAQF VAYFNFTHLGTYIAVEGAAGLKAIGFTGLPLILAFILVSAFINLFMGSASAKWAIMAPVF VPMLMQLGYSPEFTQVAYRIGDSSTNIISPLMSYFAMIVAFAQQYDKKAGMGTLISIMLP YSISFLIGWSILLVIWFMLNLPIGPEAFIHLLG >gi|224531372|gb|GG658180.1| GENE 356 371478 - 372050 614 190 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466610|ref|ZP_05630921.1| ## NR: gi|257466610|ref|ZP_05630921.1| hypothetical protein FgonA2_04118 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 190 1 190 190 325 100.0 1e-87 MFINLSKNKNCSQVIQYLKQYTTEEFQRETEIVGLIYESHFLDMEQKSLEILKGLNLENK KYIFALCISKGIQGNSLYRIKQTVEATGYELDYIEHIIIGENISGEASFQGEKKSSELEE KIKNISQELNQKRIKKINTSYSKCSSFFAKIVRISLIYHFLQSSLDSNRCRKCGHCRGVC PTQKKIQKSS >gi|224531372|gb|GG658180.1| GENE 357 372265 - 374496 3121 743 aa, chain + ## HITS:1 COG:FN0262 KEGG:ns NR:ns ## COG: FN0262 COG1882 # Protein_GI_number: 19703607 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Fusobacterium nucleatum # 3 742 2 742 743 1286 82.0 0 MQKAWRHFQEGNWAQTIDVTDFIKKNYQEYLGDESFLKGPTENTKKLWDILSVMLKEERE KGIYDAETKIPSRIDAYGPGYIKKELETIVGLQTDAPLKRAIFPNGGLRMVKNSLEAFGY RLDPTLEEFYSKNRKTHNSGVFSAYTPEIKLARHTGIITGLPDAYGRGRIIGDYRRVALY GVNYLIEKRKEDLNSCNPTEMTEDVIRKREEMFDQIEALEALKRMGASYGFDLGEPASTA QEAIQWTYFAYLAATKDQNGAAMSIGKVSTFLDIYIQRDLEEGSITEEQAQEFMDHFVMK LRIIRFLRTPEYDALFSGDPVWVTESLGGMDNNGKSMVTKNSYRMLHTLYNLGPAPEPNL TVLWSEHLPMAWKKYCAKVSIDTSSLQYENDDIMRPQFGDDYGIACCVSPMAIGKQMQFF GARVNLPKALLYAINGGKDENKKVQVTPEVFEKIQGEYLNYDEVWEKYDKILTWLANTYV KALNIIHYMHDKYSYEALEMALHDINIKRTEAFGIAGLSIVADSLAAIKYGKVKMIRDEE GDVVDYEIEKPYVPFGNNDDKTDELAVLVLRTFMNKIRSHKMYRDAIPTQSILTITSNVV YGKKTGNTPDGRRAGTPFAPGANPMHGRDTKGAVASLASVAKLPFEHANDGISYTFAITP NTLGKTMEEKKSNLVGLMDGYFKQTGHHLNVNVFGRELLEDAMEHPEKYPQLTIRVSGYA VNFVKLTREQQLDVVNRTISDKF >gi|224531372|gb|GG658180.1| GENE 358 374524 - 375249 753 241 aa, chain + ## HITS:1 COG:FN0261 KEGG:ns NR:ns ## COG: FN0261 COG1180 # Protein_GI_number: 19703606 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Fusobacterium nucleatum # 1 241 1 241 243 353 68.0 2e-97 MKAYINSFESFGTKDGPGIRFVLFLQGCPLRCRYCHNVDAWNLQHPNYIYTSEEILEEVN RVKVFLTGGITISGGEPLLQADFVKEFFQLCHKNGIHTALDTSGYIFTEKVKEVLEETDL VLLDLKHIDSEKYYDLTSVNLSPTLEFLEYLSKTQKDTWIRYVLVPGYTDDVEDLKRWAE YVSKYSNVKRVDILPFHQMAIYKWEKERKNYTLRDVLPPTKEAVRFAENIFLSYGLPVYT E >gi|224531372|gb|GG658180.1| GENE 359 375317 - 375877 735 186 aa, chain - ## HITS:1 COG:no KEGG:Plut_0528 NR:ns ## KEGG: Plut_0528 # Name: not_defined # Def: exonuclease # Organism: P.luteolum # Pathway: not_defined # 2 183 3 183 197 116 33.0 6e-25 MKILYLDTETTGLTYRSTIIQLAAIVEIDGEIKETINLYCAPFPDSDISEEALSITKFTR EEIFQFDSPQVVCQTFTQILGKYVDKYNKNDKFIVIGHNVKFDLDMLRNWAYRCNERFIA SYIDFKNEFDTLAFTKCLKILGKLPQTENNKLETLCQAFQIPLENAHNALADTIAAKDLY HYLQNK >gi|224531372|gb|GG658180.1| GENE 360 375906 - 376520 681 204 aa, chain - ## HITS:1 COG:FN0469 KEGG:ns NR:ns ## COG: FN0469 COG3142 # Protein_GI_number: 19703804 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Fusobacterium nucleatum # 1 202 1 202 202 219 58.0 2e-57 MIKEACVGSIQEAILAEKNGANRIELCDNLIEGGTTPSYGCMKIALKSLNIPIFPMIRPR GGNFCYTKEEIETMKEDILMAKKLGIPGVVFGALTSNGELDIPNLQYLMEAAKPMQTTFH KAIDEMNFPLKAIPQLIGLGFDRILTSGKKEKALEGVKLLNEMIEVANEKIIIVAAGKVN FENIEECSSKIHTNEFHGKQIVKL >gi|224531372|gb|GG658180.1| GENE 361 376513 - 377928 1779 471 aa, chain - ## HITS:1 COG:CAC0274 KEGG:ns NR:ns ## COG: CAC0274 COG1027 # Protein_GI_number: 15893566 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Clostridium acetobutylicum # 1 465 1 465 465 560 60.0 1e-159 MTFRLESDSIGSLQVPSDAYYGVQTLRAKNNFFITGYRLNPIFISSLAYVKKAAAICNME AKTIQEDIAKAIIQAADEIIAGKFRDQFITDVIQGGAGTSMNMNMNEVIANRANELLGGA LGTYDKVHPNDHVNFGQSTNDVVPTSGKLTIQFLLKDLVSNLEDLYSAFQSKATQYDHII KMGRTHLQDAVPIRVGQEFRAFSGPVKRDIERLKAAMYELSFVNMGATAVGTGLNADVNY IQRVVEVLSEVTGFSFSQCEDLVDGTRNLDSFVYLSSILKTCAVNLSKTANDIRLMSSGP KAGIAELILPQEQPGSSIMPGKVNPVIPEVMNQVCFQIFGNDVTITKAAEAGQLELNVFE PVLFFNLFQSIQILTNGIRTFIDNCIAGIQVNEEDCKYWLTRSVGVVTALSPHIGYKVAA EIAKLSLKTGKPVYDLVLEQGLLEKEKLDVILNPFEMTKPGIAGKELLSRD Prediction of potential genes in microbial genomes Time: Sat Jul 9 16:47:31 2011 Seq name: gi|224531371|gb|GG658181.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.3, whole genome shotgun sequence Length of sequence - 283214 bp Number of predicted genes - 271, with homology - 259 Number of transcription units - 73, operones - 47 average op.length - 5.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . - CDS 1433 - 1867 520 ## Ilyop_1896 S-layer domain protein - Prom 2073 - 2132 14.8 - TRNA 1988 - 2062 71.6 # Gln TTG 0 0 - Term 1937 - 1974 1.0 3 2 Op 1 1/0.188 - CDS 2153 - 2437 522 ## COG2088 Uncharacterized protein, involved in the regulation of septum location 4 2 Op 2 1/0.188 - CDS 2473 - 3336 756 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 5 2 Op 3 3/0.000 - CDS 3323 - 3628 380 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 6 2 Op 4 . - CDS 3697 - 6648 3328 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) - Term 6666 - 6696 1.2 7 3 Op 1 11/0.000 - CDS 6709 - 8553 2370 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 8 3 Op 2 4/0.000 - CDS 8563 - 9936 1959 ## COG0486 Predicted GTPase 9 3 Op 3 16/0.000 - CDS 9945 - 10694 734 ## COG1847 Predicted RNA-binding protein 10 3 Op 4 18/0.000 - CDS 10697 - 11314 719 ## COG0706 Preprotein translocase subunit YidC 11 3 Op 5 16/0.000 - CDS 11333 - 11542 218 ## COG0759 Uncharacterized conserved protein 12 3 Op 6 . - CDS 11551 - 11781 216 ## COG0594 RNase P protein component 13 3 Op 7 . - CDS 11778 - 11882 75 ## - Term 11910 - 11943 4.1 14 3 Op 8 . - CDS 11946 - 12080 196 ## PROTEIN SUPPORTED gi|197735492|ref|YP_002164270.1| hypothetical protein FNP_0004 - Prom 12115 - 12174 10.2 + Prom 12193 - 12252 10.3 15 4 Tu 1 . + CDS 12284 - 12499 154 ## + Prom 12551 - 12610 7.6 16 5 Op 1 . + CDS 12739 - 14484 2054 ## Ilyop_0001 chromosomal replication initiator protein DnaA 17 5 Op 2 9/0.000 + CDS 14544 - 14756 378 ## COG2501 Uncharacterized conserved protein 18 5 Op 3 . + CDS 14792 - 15886 1075 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 19 5 Op 4 . + CDS 15867 - 16166 335 ## gi|257452987|ref|ZP_05618286.1| hypothetical protein F3_07999 20 5 Op 5 24/0.000 + CDS 16159 - 18075 2505 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 21 5 Op 6 1/0.188 + CDS 18122 - 20557 3172 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 22 5 Op 7 1/0.188 + CDS 20569 - 21009 496 ## COG0622 Predicted phosphoesterase 23 5 Op 8 40/0.000 + CDS 21027 - 22040 1184 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 24 5 Op 9 . + CDS 22059 - 24446 2925 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 25 5 Op 10 1/0.188 + CDS 24449 - 25009 623 ## COG0193 Peptidyl-tRNA hydrolase + Term 25017 - 25050 3.1 + Prom 25133 - 25192 14.4 26 6 Op 1 12/0.000 + CDS 25261 - 26571 1920 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 27 6 Op 2 12/0.000 + CDS 26613 - 27548 1211 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 28 6 Op 3 13/0.000 + CDS 27538 - 28071 770 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 29 6 Op 4 3/0.000 + CDS 28071 - 28676 929 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 30 6 Op 5 12/0.000 + CDS 28673 - 29257 943 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 31 6 Op 6 . + CDS 29283 - 30221 1431 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB + Term 30227 - 30276 4.7 - Term 30223 - 30251 2.3 32 7 Tu 1 . - CDS 30258 - 31397 1001 ## COG1940 Transcriptional regulator/sugar kinase - Prom 31425 - 31484 13.6 + Prom 31320 - 31379 8.7 33 8 Op 1 6/0.000 + CDS 31533 - 33065 2459 ## COG2986 Histidine ammonia-lyase 34 8 Op 2 . + CDS 33067 - 35097 2848 ## COG2987 Urocanate hydratase + Term 35112 - 35168 12.4 - Term 35108 - 35150 7.2 35 9 Tu 1 . - CDS 35195 - 35848 995 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 35872 - 35931 9.3 + Prom 35994 - 36053 11.3 36 10 Tu 1 . + CDS 36086 - 37492 790 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 37509 - 37562 2.5 + TRNA 37650 - 37726 82.6 # Pro TGG 0 0 + TRNA 37731 - 37806 93.2 # Gly TCC 0 0 + TRNA 37815 - 37890 76.3 # His GTG 0 0 + TRNA 37900 - 37975 94.1 # Lys TTT 0 0 + TRNA 37982 - 38065 67.8 # Leu TAG 0 0 + Prom 37984 - 38043 80.3 37 11 Op 1 . + CDS 38155 - 38439 335 ## FN1563 hypothetical protein 38 11 Op 2 1/0.188 + CDS 38436 - 39248 1010 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 39 11 Op 3 . + CDS 39245 - 39964 951 ## COG1496 Uncharacterized conserved protein 40 11 Op 4 . + CDS 39936 - 40004 86 ## - Term 39956 - 39994 1.1 41 12 Op 1 . - CDS 39999 - 40532 695 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 42 12 Op 2 . - CDS 40504 - 41862 1467 ## FN0748 hypothetical protein - Prom 41896 - 41955 8.0 + Prom 41855 - 41914 10.7 43 13 Tu 1 . + CDS 41952 - 42266 376 ## COG2827 Predicted endonuclease containing a URI domain + Term 42371 - 42439 30.4 + TRNA 42341 - 42428 70.9 # Leu TAA 0 0 + TRNA 42437 - 42513 82.4 # Met CAT 0 0 + TRNA 42527 - 42602 93.2 # Gly TCC 0 0 + TRNA 42606 - 42681 94.1 # Lys TTT 0 0 + TRNA 42690 - 42766 89.8 # Arg TCT 0 0 + TRNA 42785 - 42861 98.9 # Met CAT 0 0 + TRNA 42883 - 42957 66.8 # Glu TTC 0 0 + TRNA 42960 - 43043 66.2 # Ser TGA 0 0 + TRNA 43062 - 43137 87.4 # Phe GAA 0 0 + TRNA 43147 - 43222 97.4 # Val TAC 0 0 + TRNA 43229 - 43306 93.0 # Asp GTC 0 0 + Prom 43231 - 43290 80.4 44 14 Op 1 . + CDS 43414 - 43617 449 ## + Term 43629 - 43681 9.3 + Prom 43653 - 43712 14.9 45 14 Op 2 3/0.000 + CDS 43733 - 44812 1247 ## COG0726 Predicted xylanase/chitin deacetylase 46 14 Op 3 3/0.000 + CDS 44821 - 45600 735 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 47 14 Op 4 11/0.000 + CDS 45588 - 46619 1195 ## COG0859 ADP-heptose:LPS heptosyltransferase 48 14 Op 5 . + CDS 46616 - 47623 821 ## COG0859 ADP-heptose:LPS heptosyltransferase 49 14 Op 6 . + CDS 47620 - 48309 478 ## Ilyop_0147 Mn2+dependent serine/threonine protein kinase 50 14 Op 7 1/0.188 + CDS 48267 - 49337 1066 ## COG0859 ADP-heptose:LPS heptosyltransferase 51 14 Op 8 14/0.000 + CDS 49309 - 50388 1814 ## COG0468 RecA/RadA recombinase 52 14 Op 9 1/0.188 + CDS 50438 - 50914 656 ## COG2137 Uncharacterized protein conserved in bacteria 53 14 Op 10 . + CDS 50927 - 51934 710 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 54 14 Op 11 . + CDS 51944 - 52768 892 ## Ilyop_0164 hypothetical protein 55 14 Op 12 1/0.188 + CDS 52801 - 54069 1916 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 56 14 Op 13 . + CDS 54079 - 54792 371 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 57 14 Op 14 . + CDS 54831 - 57389 3107 ## COG0495 Leucyl-tRNA synthetase 58 14 Op 15 . + CDS 57401 - 58483 1346 ## COG2404 Predicted phosphohydrolase (DHH superfamily) + Prom 58498 - 58557 9.9 59 15 Op 1 . + CDS 58600 - 59163 560 ## COG0241 Histidinol phosphatase and related phosphatases 60 15 Op 2 28/0.000 + CDS 59166 - 60449 1356 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 61 15 Op 3 28/0.000 + CDS 60449 - 61534 1569 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 62 15 Op 4 4/0.000 + CDS 61550 - 62851 1736 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 63 15 Op 5 26/0.000 + CDS 62865 - 63932 1270 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 64 15 Op 6 11/0.000 + CDS 63940 - 65283 1674 ## COG0773 UDP-N-acetylmuramate-alanine ligase 65 15 Op 7 6/0.000 + CDS 65296 - 66135 1214 ## COG0812 UDP-N-acetylmuramate dehydrogenase 66 15 Op 8 . + CDS 66149 - 67015 1329 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes + Prom 67097 - 67156 9.3 67 16 Op 1 . + CDS 67214 - 67714 404 ## FN1453 hypothetical protein 68 16 Op 2 35/0.000 + CDS 67704 - 68963 1603 ## COG0849 Actin-like ATPase involved in cell division 69 16 Op 3 . + CDS 68987 - 70066 1596 ## COG0206 Cell division GTPase 70 16 Op 4 11/0.000 + CDS 70161 - 70445 400 ## PROTEIN SUPPORTED gi|197736538|ref|YP_002165316.1| ribosomal protein S6 71 16 Op 5 . + CDS 70480 - 70698 346 ## PROTEIN SUPPORTED gi|237736139|ref|ZP_04566620.1| SSU ribosomal protein S18P 72 17 Tu 1 . - CDS 71591 - 71707 86 ## - Prom 71826 - 71885 11.0 + Prom 71864 - 71923 18.2 73 18 Op 1 . + CDS 71951 - 72940 1353 ## COG1052 Lactate dehydrogenase and related dehydrogenases 74 18 Op 2 . + CDS 72999 - 74498 2315 ## COG1288 Predicted membrane protein + Term 74518 - 74558 5.1 - Term 74555 - 74598 4.2 75 19 Tu 1 . - CDS 74612 - 74869 390 ## PROTEIN SUPPORTED gi|237745230|ref|ZP_04575711.1| LSU ribosomal protein L28P - Prom 74906 - 74965 8.4 + Prom 74970 - 75029 12.0 76 20 Op 1 1/0.188 + CDS 75051 - 77387 3291 ## COG1193 Mismatch repair ATPase (MutS family) 77 20 Op 2 1/0.188 + CDS 77363 - 78061 346 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 78 20 Op 3 8/0.000 + CDS 78123 - 79544 2103 ## COG0215 Cysteinyl-tRNA synthetase 79 20 Op 4 1/0.188 + CDS 79532 - 79909 171 ## PROTEIN SUPPORTED gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 80 20 Op 5 1/0.188 + CDS 79922 - 80944 1521 ## COG1077 Actin-like ATPase involved in cell morphogenesis 81 20 Op 6 . + CDS 80944 - 81816 729 ## COG0470 ATPase involved in DNA replication + Term 81886 - 81952 30.0 + TRNA 81864 - 81939 97.4 # Val TAC 0 0 + TRNA 81946 - 82023 93.9 # Asp GTC 0 0 + TRNA 82029 - 82104 87.4 # Phe GAA 0 0 + TRNA 82120 - 82193 67.5 # Cys GCA 0 0 + Prom 82032 - 82091 80.4 82 21 Op 1 . + CDS 82293 - 82979 686 ## COG0588 Phosphoglycerate mutase 1 83 21 Op 2 . + CDS 83012 - 83839 850 ## COG0731 Fe-S oxidoreductases + Term 84047 - 84117 20.4 + TRNA 83945 - 84020 81.3 # Thr TGT 0 0 + TRNA 84025 - 84099 66.8 # Glu TTC 0 0 + TRNA 84118 - 84202 68.6 # Tyr GTA 0 0 + Prom 85495 - 85554 8.2 84 22 Tu 1 . + CDS 85617 - 88349 3641 ## COG5295 Autotransporter adhesin + Term 88367 - 88405 7.2 85 23 Tu 1 . - CDS 88381 - 89805 1900 ## COG0591 Na+/proline symporter 86 24 Op 1 . + CDS 90187 - 90276 223 ## 87 24 Op 2 . + CDS 90320 - 90898 887 ## COG1285 Uncharacterized membrane protein 88 24 Op 3 . + CDS 90900 - 91967 1370 ## COG0598 Mg2+ and Co2+ transporters + Term 92119 - 92153 2.1 + TRNA 92019 - 92105 72.3 # Leu CAA 0 0 89 25 Op 1 11/0.000 + CDS 92374 - 93417 305 ## PROTEIN SUPPORTED gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 + Term 93434 - 93470 7.5 90 25 Op 2 11/0.000 + CDS 93485 - 93970 772 ## COG3090 TRAP-type C4-dicarboxylate transport system, small permease component 91 25 Op 3 1/0.188 + CDS 93982 - 95268 712 ## PROTEIN SUPPORTED gi|90020581|ref|YP_526408.1| ribosomal protein L16 92 25 Op 4 . + CDS 95284 - 96075 1045 ## COG0647 Predicted sugar phosphatases of the HAD superfamily + Term 96083 - 96125 8.0 + Prom 96131 - 96190 5.7 93 25 Op 5 . + CDS 96300 - 96452 228 ## PROTEIN SUPPORTED gi|197735409|ref|YP_002164187.1| ribosomal protein L33 + Term 96504 - 96572 30.4 + TRNA 96486 - 96561 87.4 # Trp CCA 0 0 + Prom 96490 - 96549 80.4 94 26 Op 1 46/0.000 + CDS 96586 - 96768 246 ## COG0690 Preprotein translocase subunit SecE 95 26 Op 2 45/0.000 + CDS 96772 - 97362 974 ## COG0250 Transcription antiterminator 96 26 Op 3 55/0.000 + CDS 97399 - 97824 669 ## PROTEIN SUPPORTED gi|237738811|ref|ZP_04569292.1| LSU ribosomal protein L11P 97 26 Op 4 43/0.000 + CDS 97856 - 98593 1082 ## PROTEIN SUPPORTED gi|237738812|ref|ZP_04569293.1| LSU ribosomal protein L1P + Term 98703 - 98740 1.5 98 26 Op 5 47/0.000 + CDS 98761 - 99273 758 ## PROTEIN SUPPORTED gi|237738813|ref|ZP_04569294.1| LSU ribosomal protein L10P 99 26 Op 6 28/0.000 + CDS 99314 - 99679 547 ## PROTEIN SUPPORTED gi|237738814|ref|ZP_04569295.1| LSU ribosomal protein L12P + Term 99715 - 99749 3.6 + Prom 99725 - 99784 4.0 100 26 Op 7 58/0.000 + CDS 99860 - 103414 838 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 101 26 Op 8 1/0.188 + CDS 103451 - 107419 5295 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 102 26 Op 9 8/0.000 + CDS 107480 - 108358 1075 ## COG1561 Uncharacterized stress-induced protein 103 26 Op 10 . + CDS 108371 - 108934 765 ## COG0194 Guanylate kinase 104 26 Op 11 . + CDS 108931 - 109131 350 ## Ilyop_0184 DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) 105 26 Op 12 1/0.188 + CDS 109115 - 110110 1146 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 106 26 Op 13 . + CDS 110179 - 112212 3632 ## COG3808 Inorganic pyrophosphatase + Term 112238 - 112288 10.5 107 27 Tu 1 . - CDS 112174 - 112413 70 ## - Prom 112640 - 112699 4.0 + Prom 112256 - 112315 13.0 108 28 Op 1 . + CDS 112412 - 113650 1976 ## FN1590 lipoprotein + Term 113658 - 113701 6.0 109 28 Op 2 21/0.000 + CDS 113718 - 115316 201 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 110 28 Op 3 11/0.000 + CDS 115310 - 116350 1561 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 111 28 Op 4 . + CDS 116340 - 117431 1432 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 112 28 Op 5 . + CDS 117441 - 117758 478 ## gi|257466723|ref|ZP_05631034.1| hypothetical protein FgonA2_04731 + Prom 117760 - 117819 11.4 113 29 Tu 1 . + CDS 117844 - 118551 850 ## COG2992 Uncharacterized FlgJ-related protein + Term 118563 - 118603 5.0 + Prom 118596 - 118655 5.5 114 30 Op 1 12/0.000 + CDS 118692 - 120311 1247 ## COG2831 Hemolysin activation/secretion protein 115 30 Op 2 . + CDS 120321 - 127796 6987 ## COG3210 Large exoproteins involved in heme utilization or adhesion + Prom 129298 - 129357 80.3 116 31 Op 1 . + CDS 129540 - 130247 500 ## gi|257466727|ref|ZP_05631038.1| hypothetical protein FgonA2_04755 117 31 Op 2 . + CDS 130250 - 130759 260 ## gi|257466728|ref|ZP_05631039.1| hypothetical protein FgonA2_04760 118 31 Op 3 . + CDS 130759 - 131280 157 ## gi|257466729|ref|ZP_05631040.1| hypothetical protein FgonA2_04765 119 31 Op 4 . + CDS 131371 - 132369 1128 ## COG3210 Large exoproteins involved in heme utilization or adhesion + Prom 133007 - 133066 80.4 120 32 Op 1 . + CDS 133161 - 133763 507 ## gi|257466731|ref|ZP_05631042.1| hypothetical protein FgonA2_04775 + Term 133864 - 133903 3.1 + Prom 133789 - 133848 10.3 121 32 Op 2 . + CDS 133920 - 134237 129 ## gi|257466732|ref|ZP_05631043.1| hypothetical protein FgonA2_04780 122 32 Op 3 . + CDS 134212 - 134574 189 ## gi|257466733|ref|ZP_05631044.1| hypothetical protein FgonA2_04785 + Prom 134636 - 134695 1.6 123 33 Op 1 . + CDS 134720 - 135007 334 ## gi|257466734|ref|ZP_05631045.1| hypothetical protein FgonA2_04790 124 33 Op 2 . + CDS 135027 - 135653 318 ## gi|257466735|ref|ZP_05631046.1| hypothetical protein FgonA2_04795 125 33 Op 3 . + CDS 135742 - 136857 1030 ## gi|257466736|ref|ZP_05631047.1| hypothetical protein FgonA2_04800 126 34 Tu 1 . + CDS 138419 - 138895 450 ## gi|257466737|ref|ZP_05631048.1| hypothetical protein FgonA2_04805 + Term 138897 - 138935 -0.2 + Prom 138913 - 138972 3.6 127 35 Op 1 . + CDS 139004 - 139168 138 ## gi|257466726|ref|ZP_05631037.1| hemolysin 128 35 Op 2 . + CDS 139165 - 139707 563 ## gi|257466739|ref|ZP_05631050.1| hypothetical protein FgonA2_04815 + Term 139793 - 139860 18.7 + Prom 140228 - 140287 8.4 129 36 Tu 1 . + CDS 140337 - 140507 412 ## gi|257452895|ref|ZP_05618194.1| hypothetical protein F3_07499 + Term 140526 - 140562 4.9 + Prom 140516 - 140575 5.9 130 37 Op 1 1/0.188 + CDS 140622 - 141566 483 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase 131 37 Op 2 . + CDS 141569 - 144169 2992 ## COG0249 Mismatch repair ATPase (MutS family) 132 37 Op 3 . + CDS 144144 - 146537 2999 ## FN0694 S-layer protein 133 37 Op 4 . + CDS 146553 - 147278 260 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 134 37 Op 5 9/0.000 + CDS 147298 - 149898 3732 ## COG0013 Alanyl-tRNA synthetase 135 37 Op 6 1/0.188 + CDS 149910 - 150329 626 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 136 37 Op 7 31/0.000 + CDS 150343 - 151578 1819 ## COG0342 Preprotein translocase subunit SecD 137 37 Op 8 . + CDS 151580 - 152521 1555 ## COG0341 Preprotein translocase subunit SecF + Term 152530 - 152571 6.0 138 38 Op 1 . + CDS 152584 - 153648 1335 ## COG0787 Alanine racemase 139 38 Op 2 . + CDS 153663 - 154844 606 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative 140 38 Op 3 . + CDS 154856 - 155407 711 ## FN1032 hypothetical protein 141 38 Op 4 22/0.000 + CDS 155394 - 156470 1049 ## COG0795 Predicted permeases 142 38 Op 5 1/0.188 + CDS 156473 - 157558 1321 ## COG0795 Predicted permeases 143 38 Op 6 1/0.188 + CDS 157571 - 158821 1705 ## COG0612 Predicted Zn-dependent peptidases 144 38 Op 7 1/0.188 + CDS 158818 - 159258 821 ## COG0756 dUTPase 145 38 Op 8 1/0.188 + CDS 159268 - 160374 1249 ## COG0772 Bacterial cell division membrane protein 146 38 Op 9 1/0.188 + CDS 160377 - 161252 897 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 147 38 Op 10 . + CDS 161263 - 162564 1942 ## COG2252 Permeases 148 38 Op 11 1/0.188 + CDS 162567 - 163478 934 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 149 38 Op 12 . + CDS 163544 - 163969 834 ## COG0716 Flavodoxins 150 38 Op 13 . + CDS 164003 - 164068 58 ## + Prom 164070 - 164129 11.9 151 38 Op 14 . + CDS 164152 - 164799 818 ## gi|257452874|ref|ZP_05618173.1| hypothetical protein F3_07394 + Term 164812 - 164846 1.2 + Prom 164824 - 164883 5.4 152 39 Op 1 9/0.000 + CDS 164911 - 166926 2658 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 153 39 Op 2 . + CDS 166923 - 167615 615 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 154 39 Op 3 . + CDS 167584 - 167676 72 ## + Prom 167757 - 167816 14.2 155 40 Tu 1 . + CDS 167880 - 171164 3130 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 171168 - 171222 4.8 - Term 171356 - 171391 2.1 156 41 Op 1 . - CDS 171399 - 172154 700 ## COG0101 Pseudouridylate synthase 157 41 Op 2 . - CDS 172141 - 173097 1313 ## COG0039 Malate/lactate dehydrogenases - Prom 173130 - 173189 7.9 + Prom 173069 - 173128 7.5 158 42 Op 1 . + CDS 173227 - 174045 652 ## FN0898 spore photoproduct (EC:4.1.99.-) 159 42 Op 2 . + CDS 174026 - 175036 724 ## COG1533 DNA repair photolyase 160 42 Op 3 . + CDS 175033 - 175722 637 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity 161 42 Op 4 25/0.000 + CDS 175791 - 176756 1415 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 162 42 Op 5 42/0.000 + CDS 176766 - 177413 241 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 163 42 Op 6 . + CDS 177400 - 178218 1000 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components + Term 178260 - 178300 4.2 164 43 Tu 1 . - CDS 178104 - 178622 328 ## Halhy_2822 putative transcriptional regulator - Prom 178679 - 178738 7.7 + Prom 178635 - 178694 9.8 165 44 Op 1 . + CDS 178724 - 178954 412 ## gi|257452862|ref|ZP_05618161.1| hypothetical protein F3_07334 166 44 Op 2 . + CDS 178951 - 179223 332 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 167 44 Op 3 . + CDS 179210 - 179320 68 ## - Term 179217 - 179262 3.4 168 45 Op 1 22/0.000 - CDS 179277 - 180053 1182 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 169 45 Op 2 32/0.000 - CDS 180077 - 180727 935 ## COG2011 ABC-type metal ion transport system, permease component 170 45 Op 3 . - CDS 180717 - 181718 1284 ## COG1135 ABC-type metal ion transport system, ATPase component - Prom 181749 - 181808 7.6 - Term 181744 - 181803 4.6 171 46 Tu 1 . - CDS 181955 - 182410 321 ## gi|257452857|ref|ZP_05618156.1| hypothetical protein F3_07309 - Prom 182436 - 182495 10.4 + Prom 182459 - 182518 6.5 172 47 Op 1 5/0.000 + CDS 182585 - 182935 552 ## PROTEIN SUPPORTED gi|237739925|ref|ZP_04570406.1| LSU ribosomal protein L19P + Term 182936 - 183003 12.0 + Prom 182966 - 183025 8.7 173 47 Op 2 1/0.188 + CDS 183056 - 184003 1034 ## COG0681 Signal peptidase I 174 47 Op 3 1/0.188 + CDS 184004 - 184414 198 ## PROTEIN SUPPORTED gi|228002792|ref|ZP_04049785.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 175 47 Op 4 1/0.188 + CDS 184428 - 185861 1842 ## COG0015 Adenylosuccinate lyase 176 47 Op 5 1/0.188 + CDS 185864 - 186406 455 ## COG4769 Predicted membrane protein 177 47 Op 6 1/0.188 + CDS 186403 - 187761 2096 ## COG1109 Phosphomannomutase 178 47 Op 7 . + CDS 187791 - 188507 1025 ## COG0500 SAM-dependent methyltransferases 179 47 Op 8 . + CDS 188507 - 188761 314 ## gi|257452849|ref|ZP_05618148.1| hypothetical protein F3_07269 180 47 Op 9 . + CDS 188736 - 189110 142 ## Ilyop_0200 ATP synthase I 181 47 Op 10 40/0.000 + CDS 189114 - 189920 1087 ## COG0356 F0F1-type ATP synthase, subunit a 182 47 Op 11 37/0.000 + CDS 189946 - 190221 727 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 183 47 Op 12 38/0.000 + CDS 190261 - 190767 755 ## COG0711 F0F1-type ATP synthase, subunit b 184 47 Op 13 41/0.000 + CDS 190764 - 191297 537 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 185 47 Op 14 42/0.000 + CDS 191316 - 192818 1977 ## COG0056 F0F1-type ATP synthase, alpha subunit 186 47 Op 15 42/0.000 + CDS 192833 - 193681 939 ## COG0224 F0F1-type ATP synthase, gamma subunit 187 47 Op 16 42/0.000 + CDS 193705 - 195102 1862 ## COG0055 F0F1-type ATP synthase, beta subunit 188 47 Op 17 . + CDS 195120 - 195380 383 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 195401 - 195456 10.2 + Prom 195693 - 195752 4.3 189 48 Op 1 . + CDS 195775 - 196713 1453 ## COG0225 Peptide methionine sulfoxide reductase 190 48 Op 2 26/0.000 + CDS 196724 - 197149 631 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 191 48 Op 3 . + CDS 197153 - 198043 1254 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 192 48 Op 4 . + CDS 198065 - 199036 1305 ## COG0391 Uncharacterized conserved protein 193 48 Op 5 . + CDS 199038 - 199229 158 ## Moth_1713 sigma-54 dependent trancsriptional regulator 194 48 Op 6 . + CDS 199216 - 200496 1317 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family + Term 200501 - 200532 -0.7 195 49 Op 1 . - CDS 201760 - 202647 835 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 196 49 Op 2 . - CDS 202669 - 204102 1364 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 204201 - 204260 7.0 + Prom 203993 - 204052 10.5 197 50 Op 1 1/0.188 + CDS 204228 - 205415 1952 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 198 50 Op 2 1/0.188 + CDS 205433 - 206782 2152 ## COG1757 Na+/H+ antiporter 199 50 Op 3 . + CDS 206844 - 210416 5096 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 200 50 Op 4 . + CDS 210430 - 211290 1000 ## Odosp_3333 hypothetical protein + Term 211317 - 211361 12.1 - Term 211303 - 211348 12.3 201 51 Op 1 1/0.188 - CDS 211370 - 211675 360 ## COG1799 Uncharacterized protein conserved in bacteria 202 51 Op 2 . - CDS 211690 - 212634 276 ## PROTEIN SUPPORTED gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B 203 51 Op 3 1/0.188 - CDS 212624 - 213184 574 ## COG1658 Small primase-like proteins (Toprim domain) - Prom 213212 - 213271 4.3 - Term 213314 - 213347 -0.1 204 52 Op 1 . - CDS 213372 - 214763 1526 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases 205 52 Op 2 . - CDS 214791 - 214985 387 ## gi|257466812|ref|ZP_05631123.1| hypothetical protein FgonA2_05180 206 52 Op 3 . - CDS 215032 - 216273 1625 ## COG0772 Bacterial cell division membrane protein - Prom 216301 - 216360 6.9 + Prom 216324 - 216383 11.3 207 53 Tu 1 . + CDS 216417 - 217109 793 ## COG1738 Uncharacterized conserved protein + Term 217189 - 217233 9.2 208 54 Tu 1 . - CDS 217060 - 218055 612 ## FN0917 hypothetical protein - Prom 218083 - 218142 8.9 + Prom 217959 - 218018 9.6 209 55 Op 1 . + CDS 218151 - 219686 1361 ## COG1178 ABC-type Fe3+ transport system, permease component 210 55 Op 2 2/0.000 + CDS 219673 - 221175 2016 ## COG1492 Cobyric acid synthase 211 55 Op 3 9/0.000 + CDS 221172 - 222134 1069 ## COG1270 Cobalamin biosynthesis protein CobD/CbiB 212 55 Op 4 3/0.000 + CDS 222115 - 223191 979 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 213 55 Op 5 1/0.188 + CDS 223188 - 224507 1298 ## COG1797 Cobyrinic acid a,c-diamide synthase 214 55 Op 6 5/0.000 + CDS 224516 - 225160 810 ## COG2082 Precorrin isomerase 215 55 Op 7 6/0.000 + CDS 225192 - 226316 1228 ## COG1903 Cobalamin biosynthesis protein CbiD 216 55 Op 8 2/0.000 + CDS 226309 - 226953 883 ## COG2241 Precorrin-6B methylase 1 217 55 Op 9 7/0.000 + CDS 226940 - 227521 857 ## COG2242 Precorrin-6B methylase 2 218 55 Op 10 9/0.000 + CDS 227511 - 228233 961 ## COG2243 Precorrin-2 methylase 219 55 Op 11 12/0.000 + CDS 228212 - 228973 1017 ## COG2875 Precorrin-4 methylase 220 55 Op 12 6/0.000 + CDS 228989 - 230008 1182 ## COG2073 Cobalamin biosynthesis protein CbiG 221 55 Op 13 4/0.000 + CDS 230001 - 230744 1047 ## COG1010 Precorrin-3B methylase 222 55 Op 14 . + CDS 230759 - 231514 929 ## COG2099 Precorrin-6x reductase - Term 231489 - 231528 4.5 223 56 Tu 1 . - CDS 231542 - 233806 1593 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 233841 - 233900 10.8 + Prom 233821 - 233880 9.4 224 57 Tu 1 . + CDS 233908 - 235806 2171 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 235833 - 235891 4.2 + Prom 235844 - 235903 11.8 225 58 Op 1 56/0.000 + CDS 235950 - 236318 610 ## PROTEIN SUPPORTED gi|237737534|ref|ZP_04568015.1| SSU ribosomal protein S12P 226 58 Op 2 51/0.000 + CDS 236339 - 236809 772 ## PROTEIN SUPPORTED gi|237737535|ref|ZP_04568016.1| SSU ribosomal protein S7P 227 58 Op 3 1/0.188 + CDS 236836 - 238917 2729 ## COG0480 Translation elongation factors (GTPases) + Prom 240111 - 240170 80.4 228 59 Tu 1 . + CDS 240334 - 241503 852 ## COG0477 Permeases of the major facilitator superfamily - Term 241470 - 241519 6.5 229 60 Op 1 . - CDS 241533 - 242159 485 ## COG4122 Predicted O-methyltransferase 230 60 Op 2 1/0.188 - CDS 242166 - 243059 930 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 231 60 Op 3 . - CDS 243084 - 244421 1997 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) - Prom 244605 - 244664 9.4 232 61 Op 1 . + CDS 244501 - 244566 68 ## 233 61 Op 2 . + CDS 244556 - 245878 1327 ## COG0144 tRNA and rRNA cytosine-C5-methylases + Term 246013 - 246079 30.0 + TRNA 245890 - 245973 66.2 # Ser TGA 0 0 + TRNA 245979 - 246067 67.5 # Ser GCT 0 0 + Prom 245997 - 246056 80.4 234 62 Op 1 . + CDS 246172 - 246741 831 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 235 62 Op 2 . + CDS 246738 - 247259 401 ## FN1061 hypothetical protein 236 62 Op 3 12/0.000 + CDS 247304 - 248116 1239 ## COG3959 Transketolase, N-terminal subunit 237 62 Op 4 . + CDS 248136 - 249065 1458 ## COG3958 Transketolase, C-terminal subunit + Term 249077 - 249132 14.6 + Prom 249091 - 249150 8.8 238 63 Op 1 1/0.188 + CDS 249177 - 250022 1059 ## COG2177 Cell division protein 239 63 Op 2 1/0.188 + CDS 250019 - 251122 1317 ## COG4942 Membrane-bound metallopeptidase 240 63 Op 3 17/0.000 + CDS 251144 - 251944 907 ## COG0061 Predicted sugar kinase 241 63 Op 4 1/0.188 + CDS 251938 - 253605 2563 ## COG0497 ATPase involved in DNA repair 242 63 Op 5 1/0.188 + CDS 253602 - 254315 618 ## COG0582 Integrase 243 63 Op 6 . + CDS 254316 - 255206 1186 ## COG1159 GTPase 244 63 Op 7 . + CDS 255284 - 256108 1215 ## COG0489 ATPases involved in chromosome partitioning 245 63 Op 8 7/0.000 + CDS 256156 - 256932 1172 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 246 63 Op 9 . + CDS 256978 - 257811 1278 ## COG1250 3-hydroxyacyl-CoA dehydrogenase + Term 257824 - 257855 4.1 - Term 257812 - 257843 4.1 247 64 Tu 1 . - CDS 257844 - 258752 1122 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 258773 - 258832 8.4 + Prom 258804 - 258863 12.2 248 65 Op 1 1/0.188 + CDS 258891 - 259607 1133 ## COG0775 Nucleoside phosphorylase 249 65 Op 2 . + CDS 259604 - 260833 1579 ## COG0285 Folylpolyglutamate synthase 250 65 Op 3 . + CDS 260820 - 261431 821 ## gi|257466856|ref|ZP_05631167.1| hypothetical protein FgonA2_05400 251 65 Op 4 . + CDS 261448 - 263361 2536 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 252 65 Op 5 1/0.188 + CDS 263375 - 264679 1797 ## COG0213 Thymidine phosphorylase + Term 264692 - 264727 0.2 + Prom 264791 - 264850 5.3 253 66 Tu 1 . + CDS 264888 - 265781 1022 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 265823 - 265876 -0.7 + Prom 265798 - 265857 11.2 254 67 Tu 1 . + CDS 265890 - 267374 2054 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 267394 - 267443 7.1 + Prom 267407 - 267466 5.5 255 68 Op 1 1/0.188 + CDS 267498 - 268580 1227 ## COG0787 Alanine racemase 256 68 Op 2 . + CDS 268577 - 269320 580 ## COG2035 Predicted membrane protein + Term 269350 - 269398 7.2 257 69 Tu 1 . - CDS 269286 - 270002 670 ## Sterm_1160 molybdenum ABC transporter periplasmic molybdate-binding protein - Prom 270064 - 270123 14.3 + Prom 270080 - 270139 8.5 258 70 Tu 1 . + CDS 270175 - 270624 616 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) + Term 270640 - 270672 4.0 + Prom 270811 - 270870 9.4 259 71 Op 1 . + CDS 270933 - 272573 2037 ## COG5295 Autotransporter adhesin 260 71 Op 2 . + CDS 272611 - 272724 108 ## - TRNA 272659 - 272735 91.0 # Met CAT 0 0 - TRNA 272740 - 272816 89.3 # Ala TGC 0 0 - TRNA 272827 - 272902 93.2 # Gly TCC 0 0 + Prom 272908 - 272967 16.9 261 72 Op 1 5/0.000 + CDS 273056 - 273907 1043 ## COG1660 Predicted P-loop-containing kinase 262 72 Op 2 1/0.188 + CDS 273894 - 275666 1857 ## COG0322 Nuclease subunit of the excinuclease complex 263 72 Op 3 1/0.188 + CDS 275671 - 277188 1709 ## COG2208 Serine phosphatase RsbU, regulator of sigma subunit 264 72 Op 4 1/0.188 + CDS 277207 - 278115 1085 ## COG3872 Predicted metal-dependent enzyme 265 72 Op 5 . + CDS 278144 - 278557 480 ## COG1959 Predicted transcriptional regulator 266 72 Op 6 . + CDS 278618 - 279145 513 ## FN0407 hypothetical protein + Term 279167 - 279207 5.1 + Prom 279177 - 279236 9.2 267 73 Op 1 10/0.000 + CDS 279318 - 280238 969 ## COG0777 Acetyl-CoA carboxylase beta subunit 268 73 Op 2 5/0.000 + CDS 280228 - 281184 1181 ## COG0825 Acetyl-CoA carboxylase alpha subunit 269 73 Op 3 1/0.188 + CDS 281189 - 282160 1451 ## COG0205 6-phosphofructokinase 270 73 Op 4 1/0.188 + CDS 282180 - 282482 477 ## COG2926 Uncharacterized protein conserved in bacteria 271 73 Op 5 . + CDS 282484 - 283077 827 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Term 283085 - 283127 8.2 Predicted protein(s) >gi|224531371|gb|GG658181.1| GENE 1 56 - 1405 1844 449 aa, chain - ## HITS:1 COG:FN2054 KEGG:ns NR:ns ## COG: FN2054 COG0166 # Protein_GI_number: 19705344 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Fusobacterium nucleatum # 1 449 1 448 448 634 69.0 0 MKSISFDFKTSRQFISEEEIENIKPQITLATNILENGSGAGNDFLGWLSLPTNYDKEEFI RIQEAAEKIKKQSEVLVVIGIGGSYLGARAVIECLNHTFYNHLDSKKRNTPEIYFVGHNI SGRYIKHLLEVIGDRDFSVNVISKSGTTTEPAIAFRIFKKKLEEKYGKKEAKERIFATTD AKKGALKSLAIQEGYETFVIPDNVGGRFSVFTAVGLLPIAVSGISISELMSGAKDGELEY SKTFDENICYQYAAVRNILYRKNISVELLVNYDPRFHFIAEWWKQLFGESEGKDGKGLFP AAVDLSTDLHSMGQYIQDGKRILMETVLQVEAEEEDITLELEKEDLDGLNYLAGKTMHEI NQKAFSGTLLAHIDGGVPNFVITLPEVNAYYIGKLLYFFEKACGVSGYLLAVNPFNQPGV ESYKKNMFALLGKKGYEELSEKLEKRLKK >gi|224531371|gb|GG658181.1| GENE 2 1433 - 1867 520 144 aa, chain - ## HITS:1 COG:no KEGG:Ilyop_1896 NR:ns ## KEGG: Ilyop_1896 # Name: not_defined # Def: S-layer domain protein # Organism: I.polytropus # Pathway: not_defined # 1 143 1 145 148 87 35.0 2e-16 MKKIILLIFLLLAFHSFSNHTLSTDHWSYEALKHVSNKKIINEDIQRFDGTKLVTKSEFV YSLSRILKLVETEKASQEDIRVLESLILQYSDELNKIGFDTKTYDNKLENINDNIQILQA LVNENEKKIDILMKRIEKLENKKY >gi|224531371|gb|GG658181.1| GENE 3 2153 - 2437 522 94 aa, chain - ## HITS:1 COG:FN0022 KEGG:ns NR:ns ## COG: FN0022 COG2088 # Protein_GI_number: 19703374 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein, involved in the regulation of septum location # Organism: Fusobacterium nucleatum # 1 89 1 89 93 103 58.0 9e-23 MKITDVRVKKIIGEETGRLKAYVDLTFDEAFVIHGLKLIEGESGKFIAMPSRKMPDGEFK DIVHPISPELRKEITDCVIQKYEEVLKEEIVSEE >gi|224531371|gb|GG658181.1| GENE 4 2473 - 3336 756 287 aa, chain - ## HITS:1 COG:FN0021 KEGG:ns NR:ns ## COG: FN0021 COG1947 # Protein_GI_number: 19703373 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Fusobacterium nucleatum # 4 284 8 290 294 221 46.0 2e-57 MKIYKIKANAKINIGLNILGKAENGYHLLDMTMLPISYYDTLRIQVFSQKGGLHIFCKDR SIPRDKRNILFKIYEKFYQWTQIEPEKIKISLRKNIPSEAGLGGGSSDGAFFLKFLNTYY SYPLSKEELFRLAFEVGSDLPFFLKNMASRVEGTGEKITPFFHQSKQKILIFKPKFGFST KEAYELSDAYSTIKMADIPLIIQGLKDGNIQEKEENISNHLEEVLLLHKKELKKLKEKIE KYTRKKTFMTGSGSAYYIFLEEKSAYSIRRKCKKYFKDCKVQLCNFL >gi|224531371|gb|GG658181.1| GENE 5 3323 - 3628 380 101 aa, chain - ## HITS:1 COG:FN0020 KEGG:ns NR:ns ## COG: FN0020 COG1188 # Protein_GI_number: 19703372 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Fusobacterium nucleatum # 1 99 1 99 99 121 71.0 3e-28 MRLDKFLKVSRIIKRRPIAKLVLDEKKAKLDGKIAKSSTEVKVGQELELEYFNKYFKFKI LQVPSGNVAKEKTSELVELIESKGIEKNFSLDSEEEFFENI >gi|224531371|gb|GG658181.1| GENE 6 3697 - 6648 3328 983 aa, chain - ## HITS:1 COG:FN0019 KEGG:ns NR:ns ## COG: FN0019 COG1197 # Protein_GI_number: 19703371 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Fusobacterium nucleatum # 5 981 3 979 981 891 52.0 0 MDKIQKYRGEIPYFIQENCKDILIYICSSYRNLEDYYSVLKDISSLPMYMLERKETEESI SQRYELFEFFKKKKKAILLLTLDMFLTKYKEIGSYQIFTVGKEYSITKLVEHLEQQEYTR NYLLEKKGEYSIRGDILDIYPYTDSSPIRIEFFGEEIERISYFDIENQKSFHLLKEYKMY TDNNKIEKSLIPFLNLEKKNYSLFFENIELLSYKLEEMILLEENEREKQKYRKEFENLYE NGIELEILQFQYQDLERFKKKEELEAISKSKKIILKSLEIEKYQEIYSNVISKYDKYPYF EGYENEKELVLTDRELKGIRVKREIEKKKKLKISSPEQIQEGEYIIHENYGVGLYLGMEI IDGKDYLRIQYADEDKLFVPLEGIQKIEKYVHVPGIIPEIYHLGTRGFSKKREKLQEDIL KFAKEILEIQAKRKSIGGFQYSPDTVWQEEFESSFPYTETSAQKKAIQDVKQDMEMGKIM DRLICGDVGYGKTEIAIRATFKAIMDHKQVVLLAPTTVLAEQHYHRFQERFLNYPIEIAV LSRMKTPKEQKEILEKIKNGSIDLVIGTSRLLSDDLEFKDLGFLIIDEEQKFGVKAKEKF KKIRGNLNILAMTATPIPRTLNLSLLGIRDLSIVDTPPDGRKTIKTFFIEKKEENIVKAI LKELAREGQVFYVFNSVKRIEEKVKELEKILPSYVKIDYIHGKMSGKELKYKIEQFENMQ IDVLVSTTIIENGIDIENANTMIIEGMEKLGLSQIYQLRGRIGRGRRQSYCYCIISEYKS KKAEEREKSLIELGQGSGLDLSMEDMRIRGAGEILGEKQHGAIETLGYHFYMKMLEEEIA KLKGEKIEETERKLYISLPFAKYIPDFYIQKEEKIVIYKRALSLQTMEEILEFEKEILDR FGKFPQEVIGFFQYLKIQYYCKEFGIYELIETDFKYWIRFEENKVDIDRIVELFSQQKID YLQRTKQVVFEGNIFNFFEMYKK >gi|224531371|gb|GG658181.1| GENE 7 6709 - 8553 2370 614 aa, chain - ## HITS:1 COG:FN0007 KEGG:ns NR:ns ## COG: FN0007 COG0445 # Protein_GI_number: 19703359 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Fusobacterium nucleatum # 2 613 3 624 628 884 69.0 0 MQEFDVIVVGGGHAGCEAALASARLGLKTAMITLYLDSIAMMSCNPSIGGPGKSNLVTEI DILGGEMGRHTDQFNLQLKHLNESKGPAARVTRGQADKFLYRTNMRLTLEHTENLSILQD CVEKLLVQEDEVYGVKTRLGIEYKAKSVILCTGTFLKGKVVIGDITYSAGRQGESAAEKL SENLRELGLQVERYQTATPPRIDKKSIDFSKLKELHGEKHPRYFSIFTEKKENTIVPTWL TYTNEKTLEKTKEMLQYSPIVSGIIETHGPRHCPSIDRKVLNFPEKTDHQIFLEMESLDS DEIYVNGFTTAMPPFAQDEILHTISGLEQAKIMRYGYAVEYDYMPAFQLYPSLENKKISG LFCAGQINGTSGYEEAAAQGLVAGINAARKILGKNPIFIDRSEAYIGVMIDDLIHKKTPE PYRVLPSRSEYRLHLRFDNAFMRLYEKTKEIGLLTQEKLLLVEKAIQNVKQEVERLKTIS ISMQEANQFLEKKQCSDLFSKGVKIADILKKKEITYLDLKELIEIPDYPEFVHNQIETIL KYEIFMEREEKQILKFKELENQLIPKDFDFSSVKGISNIALSGLLEVKPLSIGEAGRISG VTGNDLALLIAHLR >gi|224531371|gb|GG658181.1| GENE 8 8563 - 9936 1959 457 aa, chain - ## HITS:1 COG:FN0006 KEGG:ns NR:ns ## COG: FN0006 COG0486 # Protein_GI_number: 19703358 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Fusobacterium nucleatum # 1 457 1 455 455 614 72.0 1e-176 MLLDTIAAISTPRGEGGISIVRISGPESLHILEKIFFPKKNIPVKELRNYGIHYGHIKKG EEIIDEVLVSIMKAPNTYTREDIVEINCHGGYLITEKILELVLSSGARLAEMGEFTRRAF FHGRIDLTQAEAVMDIIHGKTETSLSLSMNQLRGDLKEKILSLKKAILDLAAHINVVLDY PEEGIDDPIPENLLKNLRQVSVEIKELISSYQKGKMIKEGVKTVIIGKPNVGKSSLLNSI LREERAIVTQVAGTTRDIIEEVINIKGIPLVLVDTAGIRNTTDLVENIGVMKSKEFLQKA DLVLFVLDASQELSKEDEEIYASLQENQKVIGILNKTDLEKKIQISSLSKIKNWIEISAM KYIGIEEMEEKIYQYILQENVEESSKKLILTNIRHKSALEKTNQAIENIFATVEQGLPMD LMAVDIKEALDSLSEITGEISTEDVLDHIFHNFCVGK >gi|224531371|gb|GG658181.1| GENE 9 9945 - 10694 734 249 aa, chain - ## HITS:1 COG:FN0005 KEGG:ns NR:ns ## COG: FN0005 COG1847 # Protein_GI_number: 19703357 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Fusobacterium nucleatum # 96 248 10 162 163 142 58.0 5e-34 MIKNTQIKAMTEEEAKKRALNILEAKEYQIIGIKTLESPKSFLGLFNKNGLFEISVDTEK LEKEIIKTTPVIEKKKKQTSEIKEKRKTEDVSFKENQKETTENIISEREIVSKISTLLEN IGLNLRVEYKKISEKHYQFQLFGEDNGIIIGKKGKTLNSFEYLVNSIYKEYKIEIDVEGF KEKRNQTLRELGKKMAEKCIKNRKTIRLNPMPPKERKIIHEILNRYSELETYSEGRDPKR YIVIKYKKK >gi|224531371|gb|GG658181.1| GENE 10 10697 - 11314 719 205 aa, chain - ## HITS:1 COG:FN0004 KEGG:ns NR:ns ## COG: FN0004 COG0706 # Protein_GI_number: 19703356 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Fusobacterium nucleatum # 1 204 1 204 205 261 75.0 4e-70 MTYLYELLKQLISSLLLSVDNVVQNFGISIIIATIIVRIILLPLTLKQDKSMKAMKKIQP ELEILKEKYGNDKQLLNQKTMELYQKHKVNPAGGCLPLLVQLPILFALFGVLRGGIIPED SKFLWLELTKPDPFYIFPLLNGAISFFQQKLMGNSDNPQMKNMMYMFPIMMIFISYKMPG GLQLYWLTSSLTAVLQQYFIMKKGD >gi|224531371|gb|GG658181.1| GENE 11 11333 - 11542 218 69 aa, chain - ## HITS:1 COG:FN0003 KEGG:ns NR:ns ## COG: FN0003 COG0759 # Protein_GI_number: 19703355 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 69 1 69 82 94 65.0 4e-20 MKNMLLFSIRCYQKYISPYLGKNCRFYPTCSQYTYEAIQKYGCLKGIYLGIKRISKCHPF HPGGYDPLP >gi|224531371|gb|GG658181.1| GENE 12 11551 - 11781 216 76 aa, chain - ## HITS:1 COG:FN0002 KEGG:ns NR:ns ## COG: FN0002 COG0594 # Protein_GI_number: 19703354 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Fusobacterium nucleatum # 1 76 34 109 111 67 52.0 8e-12 MNHNQYGFVASKKIGNAVCRNRIKRLFREFIKQNEILLPKSTTFILVAKKKSGEEIKTIK YEQIEKDLYKIFKIKK >gi|224531371|gb|GG658181.1| GENE 13 11778 - 11882 75 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFHTIKSQDNFQNIYKTGKKYMERIAYYSIKKIK >gi|224531371|gb|GG658181.1| GENE 14 11946 - 12080 196 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|197735492|ref|YP_002164270.1| hypothetical protein FNP_0004 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 44 1 44 44 80 86 9e-14 MKRTFQPNTRKRKKDHGFRSRMATKNGRKVLKRRRARGRQVLSA >gi|224531371|gb|GG658181.1| GENE 15 12284 - 12499 154 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTIIIIEYIHKKIFILEFIFGYRIKKVLTIFAKKNIILYIHIKNVEIINEKKKKEVIKY KKYNIIIRIHK >gi|224531371|gb|GG658181.1| GENE 16 12739 - 14484 2054 581 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_0001 NR:ns ## KEGG: Ilyop_0001 # Name: not_defined # Def: chromosomal replication initiator protein DnaA # Organism: I.polytropus # Pathway: not_defined # 18 574 10 605 612 416 48.0 1e-114 MKKIDDNIIEIPEEIEEEKFEILNHGSLAKDIKKVSIMTKELPEIEMQEYHIKESGNFLG IQGKVINMPIEMIVFPFFTPQKQNRRVNFKYYFDDLGVTMKSTLVVENNKDIVFQPSILE DKIYTFLLSLYERKEEDDDEEYIEFEISDFVVDFLGNKMNRTYYTKIEQALKNLKRTMYE FSINNHKKLGDYKFESELFQLLDYEKRKRGKKVYYKVRLNRNIRKKIQEKRYIIYNSKAL IEILNKDHIAARIYKYISQIRYKTGEKNVTNIRTLAAIIPLKVEQETERETKTGVKKYIL NRLKPVLTRICKAFDVLVEFGYILQYETEYNKEEDTYYLTYIFNKEKDNTCHISSYLKPK KKKSIEQKTKMRNQNIEEAEVVEKTKKTKGKSYEEEFSETILASLEYLKRNSYIKSLWNQ RNDRKISNLLKTEDEAFVVDLLSRFGRSYHENIKASISVYMDGIIKKMRKEEKQMGNNLT LFPVNSFSNSTNVAKTKKQIIQSRPILVKESLTWKEIENKLKKYTEEERKKIEEKALEKY YQETGGNKSFILDAKKNNLARYHKIICSYIEEVLLEQLSDK >gi|224531371|gb|GG658181.1| GENE 17 14544 - 14756 378 70 aa, chain + ## HITS:1 COG:CAC0003 KEGG:ns NR:ns ## COG: CAC0003 COG2501 # Protein_GI_number: 15893301 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 4 67 2 65 68 61 59.0 4e-10 MKEEKVTLKTEFITLNQLLKLVGISFNGAEAKYMILDGKIKVNGEVEIRRGKKIRSGDIV EFEEMKYIVE >gi|224531371|gb|GG658181.1| GENE 18 14792 - 15886 1075 364 aa, chain + ## HITS:1 COG:FN2128 KEGG:ns NR:ns ## COG: FN2128 COG1195 # Protein_GI_number: 19705418 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Fusobacterium nucleatum # 1 363 1 366 369 313 51.0 4e-85 MKVLSIQLNHVRNLKNQEIIISSPIQVFYGKNGQGKTSILEAIYFAATGLSFRTKHSSEM IRYTKNTLSCSLGYQDQFSKKSLSVSIENEKKQFFFLGKKISQMEFYGNLNVIYYIPEDV MLINGSPSVRRLFMDREISQINVFYLQQLKKFSHLLKIRNKYLKEKLYQNEEFLIYEKEF VECGSYLIEQRNHYLQLMSSFIKNIYQDLFDKEKELQLQYKTFIEFQNDVTLSKIQEEFW KEIKKKKEKEIQYGFSMVGPHKDEFIFLLERQDAKLYASQGEKKSIIFSLKLSEIDILSK NKKEMPIVLIDDVTSYFDEERCHSVLQYLYEKKVQVFITSTERLKIEADYYRIEKGEVYE NTSS >gi|224531371|gb|GG658181.1| GENE 19 15867 - 16166 335 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452987|ref|ZP_05618286.1| ## NR: gi|257452987|ref|ZP_05618286.1| hypothetical protein F3_07999 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_04233 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 99 1 99 99 157 100.0 3e-37 MKIQVHKLFDIVQEEFQKSAPMQEIFLKSHWENIVGKYSKYSEILWFREGKLCIKVYNSM ALQHMYMNKNKILVKIQEYAKKKAIIIEDVKYLLEGKYE >gi|224531371|gb|GG658181.1| GENE 20 16159 - 18075 2505 638 aa, chain + ## HITS:1 COG:FN2126 KEGG:ns NR:ns ## COG: FN2126 COG0187 # Protein_GI_number: 19705416 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Fusobacterium nucleatum # 3 638 6 639 639 971 77.0 0 MNNYGAQNITVLEGLEAVRKRPGMYIGTTSARGLHHLVWEVVDNSVDEALAGYCNTITVS ILPDNIIQVEDNGRGIPVDIHPKYGKSALEIVLTVLHAGGKFENDNYKVSGGLHGVGISV VNALSEWTEIKVKRDGNVYYQKYLRGKPIEDVKIISSLEAGDTTGTTVTFKPDAEIFETV IFEYEVLQHRLKELAYLNRGLEINLLDCRNEIGKKEKFQFEGGISDFLKEVTHENQVLLS KQIHVEGQAEQVGVDIAFTYTTSQSETIYSFVNNINTTEGGTHVTGFRTCLTKVINDIGK SQGFLKEKDGKLQGGDIREGIVAIISVKVPQPQFEGQTKTKLGNSEVSGIVNSVLSVDLK IFLEDNPNDTKLIIEKILNSKKAREAAQRAREAVLRKSVLEVGSLPGKLADCSSKKSEEC EIFLVEGDSAGGSAKQGRDRYFQAILPLKGKILNVEKAGLHKALESEEIRAMVTAFGTNI GEESFDLNKLRYGKIILMTDADVDGAHIRTLILTFLYRYMVDLIHNGNVYIAQPPLYKIS FGKSIRYAYTDAQLKEILQSVEGENKKYTLQRYKGLGEMNPEQLWETTMDPEARLLLKVS IDNAREADMLFDKLMGDKVEPRREFIQEHAEYAKNIDI >gi|224531371|gb|GG658181.1| GENE 21 18122 - 20557 3172 811 aa, chain + ## HITS:1 COG:FN2125 KEGG:ns NR:ns ## COG: FN2125 COG0188 # Protein_GI_number: 19705415 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Fusobacterium nucleatum # 1 810 1 811 811 1146 75.0 0 MSNISNRYIEEELKESYLDYSMSVIVSRALPDVRDGLKPVHRRILFAMNEMGMTNDKPFK KSARIVGEVLGKYHPHGDTAVYNTMVRMAQEFNYRYMLVEGHGNFGSIDGDSAAAMRYTE ARMSKITAELLEDIDKNTIDFRKNFDDSLDEPTVLPSKLPHLLLNGSTGIAVGMATNIPP HNLGELVDGSLQLIDNPEISDLELMEYIKGPDFPTGGIIDGKKGIRDAYLTGRGKIRVRG KVKIEENKNGKFFLIIEEIPYQLNKSTLIERIANLVKEKKITGIVDLRDESNREGIRVVI ELKKGEEPELVLNKLYKYTELQSTFGVIMLALVNNVPKVLTLKQMLCEYISHRFQVITRR TLFDLDKAQKRAHILQGYRIALENINRIIEMIRSSKDANQAKEQLIEKYAFTEIQAKSIL DMRLQRLTGLEREKVEAEYQDLEKLIIELQDILSYDNKIYDIMKQELLKVKDTYGDKRRT HIEEERMEILPEDLIKDEEMIITCTNKGYIKRIEANKYKSQNRGGKGVTGLNTIDDDVVD TILTASNLDTLMIFTDKGKVYNIKVYQLPELSRQSRGRLISNLLRIGEEEKIRAIIKTRV FDKEKELVFVTKQGIVKKTSLEEFKNINTGGLIAIKFKEEDDLIYVGLVEAAENEVFIAT RKGFAVRFPNDNVRPTGRNTMGVKGIELREGDEVVSALLIKEKEMDILTITENGYGKRTR LDEYPSHNRGGKGVINLRCNEKTGNIVSVLTALDEEELVCITSNGIIIRTPMNSISRFSR AAQGVIIMKVALDEKVASITRIKAEEEKEEI >gi|224531371|gb|GG658181.1| GENE 22 20569 - 21009 496 146 aa, chain + ## HITS:1 COG:FN2124 KEGG:ns NR:ns ## COG: FN2124 COG0622 # Protein_GI_number: 19705414 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Fusobacterium nucleatum # 1 146 7 153 153 140 46.0 6e-34 MSDSHNHFSLLVEMMEREKPERVFAMGDYTKDFEELSYLYSEIPFEIVKGNCDFWDHHFS EEKLVLLKGKRIFLTHGHLYGVKSSYDSLRQMGKNMKCDIILFGHTHREYFEKKEIILAN PGAAQDGKYGILNIENTKVEIILKRL >gi|224531371|gb|GG658181.1| GENE 23 21027 - 22040 1184 337 aa, chain + ## HITS:1 COG:FN2123 KEGG:ns NR:ns ## COG: FN2123 COG0016 # Protein_GI_number: 19705413 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Fusobacterium nucleatum # 1 337 1 337 338 501 70.0 1e-141 MKQEITALQEEAKKEIELVSSLGQLDELRIKYMGKKGKLTDLSKGMKNLSAEERPEIGQL INDAKNEILEAFSSKNSILVKEQKEKKLKEEVIDISLPSRALSLGTEHPITETMNFMKDI FIKMGFDVADGPEIEYVKYNFDALNIPDSHPSRDLTDTFYMNPEVVLRTQTSPVQIRYML EHKPPFRMICPGKVYRPDYDVSHTPMFHQMEGLVIGSNISFADLKGILTQFVKEVFGDTR VRFRPHFFPFTEPSAEMDVECNICHGEGCRVCKGSGWLEIMGCGMVDPEVLKAGGYNPEE VSGFAFGMGIERIAMLRLGIDDLRSFFENDIRFLKQF >gi|224531371|gb|GG658181.1| GENE 24 22059 - 24446 2925 795 aa, chain + ## HITS:1 COG:FN2122_2 KEGG:ns NR:ns ## COG: FN2122_2 COG0072 # Protein_GI_number: 19705412 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Fusobacterium nucleatum # 145 795 1 653 653 792 61.0 0 MLISLNWLKQYVDLKEDVLELEKALTMIGQEVENIEEQGKHLHHVVIGKIVDYQKHPNSD KLTLLQVDTGEETLQIVCGAPNHKLGDKVVVAKIGAILPGDFKIKKSEIRKVESYGMLCS EVELGIGTSADGIIILPEDAPIGEEYRKYAKLDDVVFELEITPNRPDCLSYIGIAREIGA YFERKIKYPMIVMDEIIDQVSTQAKITIEDKERCHRYMGRLIKNVKVGESPEWLKQRIQS MGLKPINNIVDITNFVMFECNQPMHAFDFDKLSGNEIFVRAAKEGEEIVTLDGVERKLNG ELVIADGEKPIAIAGVIGGEATQIDENTKNIFLEVAYFTPENIRKTSRTLGIFTDSAYRN ERGMDPEGIPYAMDRAASLIQQVAGGEILSKPLDKYLVRRELTEIPINLEKVNKFVGKAL DLDTVGNILTNLEILIKPYGPNALLVTPPSHRADLTRPADIYEEIIRMYGFDNIEAKMPK EDISAGKTAERYEIQENLKKLLTEMGLHEVINYSFIPQKARNIFHYSQPVLEIQNPLSED MAIMKPNLQYSLLANVRDNFNRNQYDLKFGEVSKTFVKVEGEDLAQEDIHLGIVLAGHKD KTLWNTGKESYDFYDIKAYVETVLAEMGIQNYNLIRSMDSNFHPGRSADIQIGRECIGTF GEVHPDIAEAMEIKKERVYLAELNITTMKKYSKKKLGYDRVSKYPAVLRDLAIVLDQDVL VGEMVKMIQKKHSLIEHIDIFDVYYGENLGEGKKSIAISIIFRDKKKTLSDTEIEENIQS ILKLIREKYQGEIRQ >gi|224531371|gb|GG658181.1| GENE 25 24449 - 25009 623 186 aa, chain + ## HITS:1 COG:FN1597 KEGG:ns NR:ns ## COG: FN1597 COG0193 # Protein_GI_number: 19704918 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Fusobacterium nucleatum # 1 186 1 186 191 205 55.0 4e-53 MKLVVGLGNPGKKYEKTRHNVGFMAIDLFLKKHSILGEKEKFLSKVVETNFQGEKVYFIK PQTYMNLSGNAIHEVVQFYKIDPVSEILVVYDDKDLPLGKLRYKVKGSSGGHNGMKSIIS HIGQEFCRLKCGIGSTSGNVIDFVIGDFQKAEESELESMLEIAVEGIEDWLKNINSEKMM QKYNKK >gi|224531371|gb|GG658181.1| GENE 26 25261 - 26571 1920 436 aa, chain + ## HITS:1 COG:FN1596 KEGG:ns NR:ns ## COG: FN1596 COG4656 # Protein_GI_number: 19704917 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Fusobacterium nucleatum # 1 436 7 441 441 654 74.0 0 MKFFGFRGGVHPPENKLQTETFPVEKLEAPKMLYVPLLQHIGAPLDPIVAVGDQVLKGQK IADSQGFLTSPIHSPVSGTVKKIEERVFPLMGTCKSIVIENDGQETWAELSKIENWETAE VKDLLAMIREKGIVGIGGASFPTHVKLNPPADTKIDTLLLNGAECEPYLNSDNRLMLENP SSIIEGVKIIKKILGVSTAIIGIEENKPEAIANMKKAAEGTGIEIAPLKTKYPQGGEKQL IKAVLNREVPSGKLPSSVGVVVQNTGTAAAIYEGLVHGTPLIEKVVTVSGKAIATPKNVR IAIGTPFSYLLDACGVDREKVDKLVMGGPMMGMAQFSEDAPVIKGTSGLLALTTEETNPY KPKACIGCGKCVSVCPMSLEPVMFARLAAFQQWEGLQNYHLMDCIECGSCAFICPANRPL TEAIKIGKAKLRSMKK >gi|224531371|gb|GG658181.1| GENE 27 26613 - 27548 1211 311 aa, chain + ## HITS:1 COG:FN1595 KEGG:ns NR:ns ## COG: FN1595 COG4658 # Protein_GI_number: 19704916 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Fusobacterium nucleatum # 2 310 8 314 314 459 77.0 1e-129 MGPSPHIRTSETVESVMYDVIIALIPAFLIAVYVFGLRAIIVTGVAVLTCLVTEYICQKI MKQDISIFDGSAVLTGILFSFVIPVIMPLPYVIIGCIIAIALGKMVYGGLGHNIFNPALV GRAFVQASWPVAITTFAYDGRTGATMLDAMKRGLDINTVLIANSGNLYLDALIGKMGGCL GETSALALILGGCYLIYKKQIDWKVPAVMIGTVFVMTWAMGAADPIMQILSGGLMLGAFF MATDMVTSPHTDKGRVVFAFGIGFLVSCIRMKGGYPEGTAYAILIMNGVVPLINRYIRPK KFGEVKTNNEK >gi|224531371|gb|GG658181.1| GENE 28 27538 - 28071 770 177 aa, chain + ## HITS:1 COG:FN1594 KEGG:ns NR:ns ## COG: FN1594 COG4659 # Protein_GI_number: 19704915 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Fusobacterium nucleatum # 1 177 1 177 177 216 58.0 1e-56 MKNKFVHYGAVLFIIAAVSAGILAAVNGFTSQVIANNAIQLVTEARKQVLPAAASFKEEE GKEVEGMTFIPGFDEAGSNVGYVVSVDQNGYAGNINFVLGLDMEGKITGINIISSGETPG LGARINEPEWQAHWIGEDDSHEFSKATDAFAGATISPNAVYTGMMRTIKAYKAEVIK >gi|224531371|gb|GG658181.1| GENE 29 28071 - 28676 929 201 aa, chain + ## HITS:1 COG:FN1593 KEGG:ns NR:ns ## COG: FN1593 COG4660 # Protein_GI_number: 19704914 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Fusobacterium nucleatum # 4 192 3 191 205 255 81.0 3e-68 MGNKIKILLEGMFTGNPVFVLLLGLCPTLGTTTSAINGFSMGVAVIAVLACSNVLISLFK KCIPDQVRIPAFIMIIASLVTIVDMMMNAYTPELYKVLGLFIPLIVVNCIVLGRAESFAS KNSVFDSLLDGIGTGIGFTLSLTLLGTIREILGNGSVFGISLFPEGFTPALIFILAPGGF MTIGVVLAIINVVKAKRGEKK >gi|224531371|gb|GG658181.1| GENE 30 28673 - 29257 943 194 aa, chain + ## HITS:1 COG:FN1592 KEGG:ns NR:ns ## COG: FN1592 COG4657 # Protein_GI_number: 19704913 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Fusobacterium nucleatum # 1 194 1 194 194 257 86.0 1e-68 MSLGSIFGIIISSIFINNIIFAKFLGCCPFMGVSKKIDASLGMGMAVTFVITIASGVTWL VYRFILEPMGLAYLQTIAFILIIASLVQFVEMAIQKTSPSLYKALGVFLPLITTNCAVLG VAIINIQADYNFIETLVNGFSVAVGFSLALILLAGVRERIEYSAIPKAFQGIPIAFLTAS LLAMAFMGFSGMKI >gi|224531371|gb|GG658181.1| GENE 31 29283 - 30221 1431 312 aa, chain + ## HITS:1 COG:MA0664 KEGG:ns NR:ns ## COG: MA0664 COG2878 # Protein_GI_number: 20089551 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Methanosarcina acetivorans str.C2A # 4 262 5 261 264 189 42.0 7e-48 MEAIVMAVVILGVTGLAMGLFLAFAAKKFEVQIDPKIEEIISILPGANCGGCGYPGCSGY ASAIVETGAAMTLCSPGGSAVAAKIGDIMGASVDTSGEKVVARVICQGDNSFSKKRFDFD GELRTCAAVTLYAGGDKSCKYGCLGYGDCERVCPVGAIVVNEKGIASVDEEACISCGLCV KACPKSVIAMTPVAKKVTVKCMSKDKGGDAKKACGIACIGCGMCQRTCPFGAIEVSNNLA KIDPAKCKNCQLCVVVCPTKAIYTGLNRPLPKKPEPKKPAAPKPAAAPTPTPEVKKEVVV EKVVEEVKAEKE >gi|224531371|gb|GG658181.1| GENE 32 30258 - 31397 1001 379 aa, chain - ## HITS:1 COG:FN0790 KEGG:ns NR:ns ## COG: FN0790 COG1940 # Protein_GI_number: 19704125 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Fusobacterium nucleatum # 1 378 16 386 387 303 44.0 3e-82 MYQKEIKKNNENIIFEYIYNQKQGFSIAEVCQSLDLTFPTVKRIFESFLEKSILIQAKKN NHGVGRKAMEYTYNNDFCYSIGVRISEDFLHLILTNSIGKVFCQSKITIPSQLKNICSFL EENILVFLRQINQEKKNKIVGIGISIPGIFNQETKMIEFKINHFSSFVALEELQKNIPYP IYIENESNLSAIAEAVLGKYLNLSEFTVLTINKNIGSSHFVRREKDRNFYFKAGRIHHMI VNKNGRKCYCGSKGCLGTYISIKALLQDFQEIFPEVQDIESIFHEKYRESKEGKKILEQY IEYLAIGIQNLLFFSNPEKIIISGMICHFQEYLYTKLLNKIYHSGHIFFRGRDTVVFSSF HENSSLVGAALFPIVDNMF >gi|224531371|gb|GG658181.1| GENE 33 31533 - 33065 2459 510 aa, chain + ## HITS:1 COG:FN0791 KEGG:ns NR:ns ## COG: FN0791 COG2986 # Protein_GI_number: 19704126 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Fusobacterium nucleatum # 1 509 6 514 516 853 85.0 0 MELVLGNNRITLEDLVNVTRRGYKVKISEEAYEKIDRARALVDKYVEEGKVSYGITTGFG KFAEVTISKEETGQLQKNIIMSHSCSVGNPMPNDVARGIVLLRAVNLAKGYSGVRRVVVE TLVEMLNKNVTPWIPEKGSVGSSGDLSPLAHMSLVLLGMGKAYYEGELLDGKTAMERAGI PILPSLSSKEGLALTNGTQSLTSVGAHVLYDAINLSKHLDIAAAMTMEGLHGIIDAYDAR IGEVRGQEGQIQTAENMRNLLAGSKNVTKQGVERVQDSYVLRCIPQIHGASKDTLEYVKR KVEIEINAVTDNPLIFVDTDEVISGGNFHGQPMALPFDFLGIALAEMANVSERRIEKMVN PAINHGLPAFLVEKGGLNSGFMIVQYSAAALVSENKVLAHPASVDSIPTSANQEDHVSMG SVAAKKSKDILENVRNVIGMELITACQAIDLKGAKDKLSKATRAAYDEVRQYVPYVDVDR ESYVDIHKAEAIIKTNKIVETVEKIIGGLH >gi|224531371|gb|GG658181.1| GENE 34 33067 - 35097 2848 676 aa, chain + ## HITS:1 COG:FN0792 KEGG:ns NR:ns ## COG: FN0792 COG2987 # Protein_GI_number: 19704127 # Func_class: E Amino acid transport and metabolism # Function: Urocanate hydratase # Organism: Fusobacterium nucleatum # 3 676 4 673 673 1230 86.0 0 MINQDIFHAMTIKLEACDIPKEIPKMDPNIRRAPKRVVNLTEDDIKLALKNALRYIPEEF HEMLAPEFLEELMEHGRIYGYRFRPEGRIYGRPIDEYKGNCTDTKAIQVMIDNNLDFAIA LYPYELVTYGETGQVCQNWMQYRLIKKYLENMTQDQTLVMASGHPTGLFHSNPYAPRVII TNGLMVGLFDDYDNWARGAAIGVANYGQMTAGGWMYIGPQGIVHGTYSTILNAGRLFCGV PADGDLRGKLFVTSGLGGMSGAQGKAGVIAKGVAIVAEVDISRIHTRLEQGWVNQIAETP EEAFTIAHEKLAAKEAYAIAFHGNVVDLLEYADTHNEHIDLLSDQTSCHAVYDGGYCPVG ISFEERTRLLAEDRKTFRELVDKTLKRHYDVIKRLTDKGVYFFDYGNSFLKAIYDTGVKE ISKNGRDDKAGFIFPSYVEDILGPELFDYGYGPFRWCCLSGKHEDLIKTDHAALELVDPN RRYQDRDNYVWIQDADKNNLVVGTQCRIFYQDAMSRTAIALKFNDMVRKGEIGPVMLGRD HHDVSGTDSPFRETSNIKDGSNIMADMATQCFAGNAARGMTMIALHNGGGVGIGKSINGG FGMVLDGSLRVDEILKQAMPWDVMGGVARRAWARNPHSIETVIEYNNKNQGTDHITLPYI ASDDLVNGLVEKVLKK >gi|224531371|gb|GG658181.1| GENE 35 35195 - 35848 995 217 aa, chain - ## HITS:1 COG:FN1265 KEGG:ns NR:ns ## COG: FN1265 COG2885 # Protein_GI_number: 19704600 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Fusobacterium nucleatum # 11 214 1 200 202 203 62.0 2e-52 MKFQKTTASLLLALTLVGCTSSPFLTDEGNINKKSSGTAGGAAVGALLGQLIGKDTKGTL IGAGVGALAGLGWGAYRDQQEAALRASLKNTAVQVQRDGENISLYLPGGVTFASDSAQIS GNFYSALNSIAQVLVQYPETQILVQGHTDNTGSFQHNMDLSNRRANSVKQYLIGQGVASN RLMSQGFGPNNPVADNSTPDGRQMNRRVEIKIAPKYN >gi|224531371|gb|GG658181.1| GENE 36 36086 - 37492 790 468 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 1 446 3 445 456 308 36 1e-82 IMELVNTLNGYLWSYILIGLLLISGIFYTLRTGFAQIFLFGDMLKLVTGKLSALKDGEKK EANQVSAFQAFCISVSSHVGTGNLAGVAIAVVLGGPGALFWMWVTSLIGCATSLIENTLA QVYKEEDGKGGFRGGPAYYMEKALGWKSMAKFFSVIVIITFAFAFNTVQANTIAQAFEGS FGFSPMVVGIVVTVLSALVIFGGLQRIANFAGLVVPVMALGYVIVALIVLLMNIAHIPAL IMLIVKSAFGVQAMAGGAMGVAMLQGVKRGLYSNEAGMGSAPNAAATSNVSHPVKQGLLQ AFGVFVDTIIICSATGFIVLLLPDYANVGETGIKLTQIALSREVGAWGNPFITACLFLFA FSSVIGNYYYGETNVEFLSGGNKQIMLIFRVISVAIIYIGSVAKLSTVWDLADLSMGIMA IMNIVAIAILSPKALHVIQDYRKKRKEGKNPEYSVKDTPEITNTEVWD >gi|224531371|gb|GG658181.1| GENE 37 38155 - 38439 335 94 aa, chain + ## HITS:1 COG:no KEGG:FN1563 NR:ns ## KEGG: FN1563 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 87 1 87 87 98 57.0 1e-19 MYNEIDLHGMNYEDALRIFIQKYNEILRKKEKREICVIHGYGSKRLDSSAVLRENLRNYL SKQKGKLKYRLDLNPGVTYVVPIAFLEERGKRKK >gi|224531371|gb|GG658181.1| GENE 38 38436 - 39248 1010 270 aa, chain + ## HITS:1 COG:FN1562 KEGG:ns NR:ns ## COG: FN1562 COG2876 # Protein_GI_number: 19704894 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Fusobacterium nucleatum # 3 269 67 333 334 396 70.0 1e-110 MTKFVTRDFQKKDTILEIAGHKIGGENFLLMAGPCSVENKEMVFSIAKKVKECGGSVLRG GAYKPRTSPYDFQGLGEEGLRYLREAADEYGLLVVTEVMSAEDLELVERYADILQVGARN MQNYSLLKKLGTVKKPILLKRGLAAKIEELLMAAEYIFAYGNPNIILCERGIRTFETMTR NTVDINAIPLLKELTHLPILIDASHGTGKRSLVSPVTLAAVVAGADGAMIEIHEHPSCAL SDGPQSLDFEMFEIFVKNLNKILAVREELL >gi|224531371|gb|GG658181.1| GENE 39 39245 - 39964 951 239 aa, chain + ## HITS:1 COG:FN1561 KEGG:ns NR:ns ## COG: FN1561 COG1496 # Protein_GI_number: 19704893 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 2 238 8 241 242 180 41.0 3e-45 MIRDYENRTEFLAWIDFGIRIIYTKKSFGDVMMMSLPTLQEKLNLPLEKTIITGKQTHSD HIAMIQEKDIVYFEDNDGFITDREDVILYTKYADCMPVFLLDRKQKKIAVVHSGWKGSFQ RIACKALTKMSKYYRTKVEDIEVVFGVGISQEHYEVGEEFFKQFQDSFSPIFITKSFQKK GEKYFYDNQEFIAQTLLECGVKEEKIFRNHLCSFEGDYHSYRRDREGAGRNGAFIYFEK >gi|224531371|gb|GG658181.1| GENE 40 39936 - 40004 86 22 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGHLYILRNKKGVQYKNCIPFL >gi|224531371|gb|GG658181.1| GENE 41 39999 - 40532 695 177 aa, chain - ## HITS:1 COG:FN0747 KEGG:ns NR:ns ## COG: FN0747 COG0494 # Protein_GI_number: 19704082 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Fusobacterium nucleatum # 12 177 9 169 171 140 45.0 1e-33 MRKIRPIPIKELHFLKPAIEKHPHNHIPLEFLIKQDAIAALLLNEDATKAFLVKQYRPGA GKELYEIPAGLIEEKEDPKLACFREIEEETGYLPKDYKILYTPDKALFVSPGYTEEALYF YIFQLYSDNTIPQALKLDEGEELVGSWIPIEEIFSENKPHISCDLKTIFCFLLWKSL >gi|224531371|gb|GG658181.1| GENE 42 40504 - 41862 1467 452 aa, chain - ## HITS:1 COG:no KEGG:FN0748 NR:ns ## KEGG: FN0748 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 21 446 2 424 430 440 58.0 1e-122 MHKFHHRLRVIKFISTLLACFIVTFLILYVIQKKENILLGLASIITSPAILITDFILVGG IGAAFLNALLIFFFNFILIRILKLKITGIVIACLLTVFGFSFFGKNMLNILPFYIGGIFY CIYAHEELSDNFVPIAFSSALAPFVSEIAFQVGSTESSYVGAIILGIGIGFIICPLAKKM YHFHEGFNLYNLGFTGGILGAVIASILKLYDVPIEPQYLVSTEHHFFLSVLCSAIFGALI LIGLLIKDVHIHYYFKLLRDPGFHTDFTKKYGYGPSFINMGIMGFLSMLFLSLEGQTLNG PILAGIFTVVGFAAYGKTPLNTFPILLGVHLASYGSNTPLFSICLSGLFGTALAPIAGVY GTLWGVVAGWLHLSVVQSIGIIHSGLNLYNNGFSCGIVASVLLPVMNMVSEQNAKSKLHL LKRHKVYIQAINRHFETQKKEEIHEKNTTHSH >gi|224531371|gb|GG658181.1| GENE 43 41952 - 42266 376 104 aa, chain + ## HITS:1 COG:FN1575 KEGG:ns NR:ns ## COG: FN1575 COG2827 # Protein_GI_number: 19704896 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Fusobacterium nucleatum # 1 63 1 63 100 62 53.0 2e-10 MKYYVYFLRCQDQSIYIGISHDVKKRFQEHLEKKGAKYTKAHPVEKILFTIPCETKSEAL KLEYFFKTWTKKQKEDFLQKADVDLGKSLYQKKKLQEKKKKEKI >gi|224531371|gb|GG658181.1| GENE 44 43414 - 43617 449 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKMVLLVLVLVGIFAGCTHTEKTATGGAVVGAAVGALLGNDARSTAIGAGLGGALGAGA GEITKNK >gi|224531371|gb|GG658181.1| GENE 45 43733 - 44812 1247 359 aa, chain + ## HITS:1 COG:FN0541 KEGG:ns NR:ns ## COG: FN0541 COG0726 # Protein_GI_number: 19703876 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Fusobacterium nucleatum # 10 359 1 351 351 335 51.0 1e-91 MYWIFIFIFILFIFHHHGIPIFLYHQVNPKSKVNPKLLEEHLRWLSKKGYTTMTMSEYIE EGANKKTVLLTLDDGYYDNYKYVFPLLKKYNMKATIFLNTLYIAEERTKEEEIEENGVAN QKAILQYIETSCAESPQYMSWKEIQEMYDSGLVDFQAHSHKHMAVFSDNKLQGFFNGKEE DCTDTYLYGGKIKRGYPKFKKRGEYTLPGIQIDKKFFSLFEEYYHKTLQYIADNKRRIEE GQKFIENHSKYFHKVTDEEFETRIREDYLENKKKIEEHLGYEVNCFCWPWGHRSWASIQI LEKYGVKAFVTTKKGTNDQLPNLKFIKRIELRNYSLQKFKWNVRITSNLILGKLYSLVS >gi|224531371|gb|GG658181.1| GENE 46 44821 - 45600 735 259 aa, chain + ## HITS:1 COG:FN0542 KEGG:ns NR:ns ## COG: FN0542 COG0463 # Protein_GI_number: 19703877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 1 247 5 250 263 312 65.0 4e-85 MKLSVAMITCNEEKILEKTLKSIVHLASEIVIVDSGSTDRTEEIAKKYGAKFVHQDWLGY GPQRNVAIGLCQSDWILNIDADEEISPKLYERIKNIIERPVTKKVYKVSFTTVCFGKKIY HGGWSGAKKVRLFYKNSGKFNNNTVHEEFETKEEIESIKEEIYHHSYVNLEDYFHKFNRY TTEGAKDAFQKRKKVSVLKIVLEPFYKFIRMYLLRLGFLDGLEGFVLANTSAMYSMVKYY KLYELYQKEKESHGSSCKK >gi|224531371|gb|GG658181.1| GENE 47 45588 - 46619 1195 343 aa, chain + ## HITS:1 COG:FN0543 KEGG:ns NR:ns ## COG: FN0543 COG0859 # Protein_GI_number: 19703878 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 1 342 6 344 345 392 60.0 1e-109 MQEIKRIIVARTDKIGDLVLSIPSFYMLKKMYPKAELIVLVRKYNYDIVKNLPYIDRVLK IDDFKKEELLMKIAYFKADAFIALFHDDYIAKLVKASKAKIKIGPISKPSSWFLYNKGVL QKRSLSMKNEAEYNLDLVKKLNPLRYQACYELNTELVLKEENRKVASLFWEQEKLGEKVL VCNPFLGGSTKNLRDEEYGRILKDLLLREQNIDIILTCQISEEERALQLKEYIGMEKVHV FANGGSILNVAAVIEKAQLYFGGSTGPTHIAGALGQKIVAFYPSKKTQSKIRWGIFRKYL EDVHYFIVDEESSEKENYEKPYFDSMNKAKEEKIANLLYEALL >gi|224531371|gb|GG658181.1| GENE 48 46616 - 47623 821 335 aa, chain + ## HITS:1 COG:FN0544 KEGG:ns NR:ns ## COG: FN0544 COG0859 # Protein_GI_number: 19703879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 1 330 1 329 342 336 51.0 4e-92 MKILIIHTAFIGDIVLSTPMIAKIADTYPKAQIYYLTVPAGASILQNNPHLTKIISYDKK GKDKTWKAFFDLAKELRKEKFDKIYCPHRYLRSMLLSLLIGAKEKIGYRTAPLSCFFSKR VNYQKNCHEVERLLSFIEGGSKTRYEIELYPGKEEENFWKKLQEETATYSCIVAIAPGSR WETKRWPLEYFQELMDKLCETGRTAILLVGGKEEQKLSFKIQKGVWDLRGKTSLLELTKI LQEVDYVVTNDSSPIHIASSSSKAKIIAIFGPTVKEIGFTPWSKNSVVIEKEDLDCRPCS IHGSNHCPQKHFRCMKELKPEMILQEIAEYSKGER >gi|224531371|gb|GG658181.1| GENE 49 47620 - 48309 478 229 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_0147 NR:ns ## KEGG: Ilyop_0147 # Name: not_defined # Def: Mn2+dependent serine/threonine protein kinase # Organism: I.polytropus # Pathway: Lipopolysaccharide biosynthesis [PATH:ipo00540]; Metabolic pathways [PATH:ipo01100] # 11 229 11 229 232 144 40.0 4e-33 MKEKISSQEVLYFSSKEALTLFELWKQGNYKIKKTLKDSNRSYVLLLEIEGKNFVYKEPR EKNRRKWQQFLSLFRGSESKREAFQMLEIENHGFLGPQLQFAYEKRKLGRVIHSFLLYSY IDAEEITVETAEKALAYLHRIHEAGFLHGDSQISNFLIHEEEIYIIDSKFQKNKYGDFAC AYEEYYFELSCPTCSFLIDRKRIPYRIAKKWKDLKEWWVKRKTKKREKK >gi|224531371|gb|GG658181.1| GENE 50 48267 - 49337 1066 356 aa, chain + ## HITS:1 COG:FN0546 KEGG:ns NR:ns ## COG: FN0546 COG0859 # Protein_GI_number: 19703881 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 15 339 6 334 335 390 59.0 1e-108 MVGKEENKEERKKMRILVIRLSSIGDVLLTTPVLKAWKEKYPDSILDFVVLKQFQAAIQN CPYIDNIHIFDKKQHDGIKNIIKFSKKLAENQYDYVFDLHNKFRSQLMRWSMRVPYFVYP KRKWWKSILVNLGLISYQVDDTIIKNYFAAFRKFSLSYQGEDLYFHVSEEDKKKFESYRN FPVLAPGASKNTKKWPIENFALLAKLLYEKYSYPSILIGGKEDEETCQKIIELSGGKAIS FAGKLSLQESGALLSQAAFLVSNDSGPFHIARGVKCPSFVIFGPTSPGMFELGKRDTLLF AGVDCSPCSLHGDKECPKKHFRCMKEITAEQILKKIEEKNSKEGVFSHGESKRKNS >gi|224531371|gb|GG658181.1| GENE 51 49309 - 50388 1814 359 aa, chain + ## HITS:1 COG:FN0547 KEGG:ns NR:ns ## COG: FN0547 COG0468 # Protein_GI_number: 19703882 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Fusobacterium nucleatum # 7 334 16 342 381 416 73.0 1e-116 MAKAKEKTVELTAKQKALETAVKEITKDFGEGAIMKLGDNSHMQIEVIPTGSLNLDAALG LGGVPRGRVVEIYGAESSGKTTIALHIIAEAQKMGGIAAFIDAEHALDPVYAKALGVDID ELLISQPDFGEQALDIADTLVRSGAIDVIVVDSVAALVPKVEIDGEMSDQQMGLQARLMS KALRKLTATLNKSKTTMIFINQIREKIGGFGFGPQTTTTGGKALKFYSSVRMEVKRIASV KQGDDVIGNETVVKVTKNKIAPPFKEASFQIMYGKGISKVGEILDIALAKDIVAKSGAWF SFGEIRLGQGKENVKARLEEESDLLNAIYEEIKKLEAPVEEEIKTGLFGEEESEEVSKA >gi|224531371|gb|GG658181.1| GENE 52 50438 - 50914 656 158 aa, chain + ## HITS:1 COG:FN0548 KEGG:ns NR:ns ## COG: FN0548 COG2137 # Protein_GI_number: 19703883 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 34 158 2 127 130 75 40.0 4e-14 MIQKFTLQGKEILSEEEYEELIRYRIRLSAYTWLSKRDYSAKELEMKLSRYCSQKQWILD LIEDLQEQEYLDDYHYAVQWIQSKKYGRSKMEYLLLQKGLSREIVKKALEETYESDLDEI VRVWNKLGEKAKEKKVMALLRKGYRYSEIKKALAEIEE >gi|224531371|gb|GG658181.1| GENE 53 50927 - 51934 710 335 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 2 315 518 841 860 278 45 2e-73 MIILGIESSCDETSIAIIRDGKTILSNYISSQIDIHKEYGGVVPEIASRQHIKNIAAILE ESLTEAGITLKEVDYIAVTYAPGLIGALLVGISFAKALAYANHIPLIPVHHIKGHIYANF LEHDVELPCISLVVSGGHTNIIYMDEKHEFHNLGGTLDDAVGESCDKVARVLGLGYPGGP VIDKMYYQGNPQYLKLTKPKVGKYEFSFSGIKTAVINFDHKMKSRGETYKKEDLAASFLG TVVDILTEKTIAAAKEKKVKHILLAGGVAANSLLRKQLAERAEQEGMKLLYPSMRLCTDN AAMIAEAAYYKIQNGGKPADYNLNGVATLDINQDI >gi|224531371|gb|GG658181.1| GENE 54 51944 - 52768 892 274 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_0164 NR:ns ## KEGG: Ilyop_0164 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 20 274 198 455 520 102 27.0 2e-20 MKRAFLFLCLFLLSFSSFAIQITGKTMLDKVQIGQVKIDFIDAENHSYSTKSNFLGEYSL HLPEGYYRIYIENENYRIAESHNQVYSFSKDRTLNFSLEKKKQQLEGMILDESGYGVADV SLEIKQNGKTYQLQSDKYGKFQFPIDCGLLSIFAQKEGFLEGGEVILVREKRPVKNLQII LKKRYSYILGIVTDGVKALPGVTVRLRNENLETIDQVFSNPLGYYQFRNIGNNQKVAVSV YEEGFQEYISDFFFVDKNYEKEHIILRKKEKNML >gi|224531371|gb|GG658181.1| GENE 55 52801 - 54069 1916 422 aa, chain + ## HITS:1 COG:FN1520 KEGG:ns NR:ns ## COG: FN1520 COG0766 # Protein_GI_number: 19704852 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Fusobacterium nucleatum # 1 422 1 423 423 631 77.0 0 MVEAFQIIGGKDLAGELVVEGSKNSTLPIMIATLVAKGKYVLKNVPNLRDIRTLVKLLES LGLQITKLDDHSYEIINTGLTNLEASYDLVKKMRASFLVMGGMLAHSKKATVSLPGGCAI GSRPVDLHLKGFEQLGVKIHIDHGYVYAEAEELIGNEIILDFPSVGATENIIMAAVKAKG KTILENAAKEPEIVDLCNFLNKMGAKITGAGRSRLEIEGVEELHACEHSIIPDRIVAGTY IIAAILFQGKITVRGVVREDLASFLSKLEEMGLKYQIEDDVFTVLSKLEDLKPGKITTMP HPGFPTDLQSPIMTLMCFIKGTSEIKETIFENRFMHVPELNRMGAKIDIDGSKATITGVD HFSSAEVMASDLRAGASLVLAALKSPGTSIVNRIYHVDRGYESLEVKLQALGANIERIKV DA >gi|224531371|gb|GG658181.1| GENE 56 54079 - 54792 371 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 4 237 9 248 255 147 33 5e-34 MERVIGINPVLEVLQNREKTIEKLEVYKGVRGEVLQKIQRLASERNIKIFYTNKKIENSQ GFCIFLTDYDYYREFDEILENMARKSQSIILILDEIQDPRNFGALIRSAEVFGVDAIIIP ERNSVRINETVVKTSTGAIEYVPIVKVTNLSNTIEKLKKIDYWVYGAAGEAESSSAEEQY PQKVVLVLGNEGTGLRKKVREYCDKLIKIPMRGKINSLNVSVAGGILLSEIAKFHKE >gi|224531371|gb|GG658181.1| GENE 57 54831 - 57389 3107 852 aa, chain + ## HITS:1 COG:FN1517 KEGG:ns NR:ns ## COG: FN1517 COG0495 # Protein_GI_number: 19704849 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 852 1 857 859 1366 75.0 0 MKEYVFKEVEKKWQERWEKDQVFKGSNAVEGKENYYVLEMLPYPSGKLHVGHARNYTIGD VIARYKRMKGYNVLHPMGWDSFGLPAENAAIQNGAHPAKWTKSNIENMKRQLKLLGFSYD WDREIASYTPEYYKWNQWIFKKMYEKGLVYKKKSLVNWCPDCKTVLANEQVEDGKCWRHS KTAVIQKELEQWFFKITDYADELLEGHEELRGGWPEKVLTMQKNWIGKSFGTEVVFQVVE NNTDLPVFTTRVDTIYGVTYAVVAPEHPIVDEILKANPVIKSAVMAMKNMDVIERAAEGK EKNGIDTGWHVKNPYNGVEVPLWIGDYVLMNYGTGAVMAVPAHDERDYAFAKKYNLEIKS VIFPKEGEIALPFVEDGLVQNSAEAFNGIPNREALVKMAEFGEEKGFAKRTFKYRLKDWG VSRQRYWGTPIPVLYCEKCGEVLEKDENLPVMLPEDIQFSGNGNPLETSESFKNATCPCC GGPARRDTDTMDTFVDSSWYFLRYCDAQNKDLPFDKKIVDGWTPVDQYIGGVEHAVMHLL YARFFHKMLRDLGYLSSNEPFKRLLTQGMVLGPSYYSAAENRFLFAEEVELKGEKAFSKK TGEELVVKVEKMSKSKNNGVDPEEMILKYGADTTRLFIMFAAPPEKELEWNENGLAGAYR FLTRVWRLVLENQDHISLEKIDYTAINKADKALIIKLNQTIKKVTESIEDDYHFNTSIAA TMELLNDVQAYQSDSTQYTRVLGEALKQIVIMLSPFVPHFCDELWESIGETGYVSEQEWP VYDEKYITTDDVVMAIQVNGKMRGSIEVERETSKEEIEKLALAVPNVVKHIEGKELVKLI VVPNKIVNIVVK >gi|224531371|gb|GG658181.1| GENE 58 57401 - 58483 1346 360 aa, chain + ## HITS:1 COG:FN1601 KEGG:ns NR:ns ## COG: FN1601 COG2404 # Protein_GI_number: 19704922 # Func_class: R General function prediction only # Function: Predicted phosphohydrolase (DHH superfamily) # Organism: Fusobacterium nucleatum # 1 357 1 357 358 390 51.0 1e-108 MADIVCDTRSQKRKKPLVVVVTHGDADGLVAAAIVKAFEERINPEQSFLIFSGMDVTEEQ TEKLFDYICKYNDLGIRDKIYILDRPIPPLGWLSMGYVCDVPMIHIDHHITNHPDTYTFD ERGKYILHHWSEEESAAFLSLEFFKPLQEKAEVFKKLYNTFYDLAKATSEWDTFHWKQLG ETTNDLLWKKKALSINAAEKLLGSVGFYRAIQERIGEEDYSQDLFTYFFRLQDAYDHQFQ NAYEFAKRSVTEYIFKSHRIGVIYGVDVNYQSMIADYLFLDKKYHFDVIAFVNIYGTVSF RGKGNFDVSILAQKLGEFCGHSGGGHKNASGCKIYNRDRFKENLLELFYESMDALKLGNF >gi|224531371|gb|GG658181.1| GENE 59 58600 - 59163 560 187 aa, chain + ## HITS:1 COG:FN1461_1 KEGG:ns NR:ns ## COG: FN1461_1 COG0241 # Protein_GI_number: 19704793 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Fusobacterium nucleatum # 1 187 5 189 197 192 51.0 2e-49 MKKAIFLDRDGTLNIEKEYLYQEKDLEFEKGVIEALSIFRDLGYLLIVVTNQSGIARNYY TEEDLEIFHQAFQRRLSFFGLKIDKFYYCPHHPEKGIGKYKQDCFCRKPKPGMLEKGIAE FDVDRNLSYMVGDKYADIQAGRAARISPILVRTGYGKEEEQKLQLGEAKVFDTLLAFAHY IKQRERL >gi|224531371|gb|GG658181.1| GENE 60 59166 - 60449 1356 427 aa, chain + ## HITS:1 COG:FN1461_2 KEGG:ns NR:ns ## COG: FN1461_2 COG0770 # Protein_GI_number: 19704793 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Fusobacterium nucleatum # 17 423 3 414 416 387 51.0 1e-107 MERLCQLLQKKFPSLPKIKIQNVVMDSRKITEGSLFFAIQNGNQYVQEALDKGASLVIAD RYSGNHEKVIKVENTILVMQELAEEYRRCLKTKMIAITGSNGKTTTKDIIYAILSKTFQT KKTLGNYNNHIGLPFTILNLEEKDEFAVLEMGMSSFGEIDLLGKIARPDYGIITNIGDSH LEFLKTRENVFKAKTELLPYLPEGCFITSGDDVFLKKIPAIHVGYDERNDYRIFGYKKKD RRSSFQLNDKQYEIPLEGKHNVMNAAMGIAIAETIGMDSKTIQQNLLQIELSPMRFERSE YQGTKYINDAYNASPISMGVALDSLVETTAECKIAVLGDMLELGEKEVTFHKDVIEKAIS CSLQAILLYGPRMKKALQEFSNIPNKVLHFEKKEEIKDYLKQFPRKTVLIKASRGMKLEE IIEREEK >gi|224531371|gb|GG658181.1| GENE 61 60449 - 61534 1569 361 aa, chain + ## HITS:1 COG:FN1459 KEGG:ns NR:ns ## COG: FN1459 COG0472 # Protein_GI_number: 19704791 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Fusobacterium nucleatum # 1 361 1 360 361 422 67.0 1e-118 MLYFLASYSTELGFLKSIYLRDFISFSLSFLLVLFLGKPFIHYLQKKKFGETIRQEGPAS HMSKKGTPTMGGVLIIFSLLLTTLLVADISNAFIGLLMISTLIFAGIGFIDDYKKFTVNK KGLAGRKKLLGQSIVAVIVWVYIKYMGLTGDTSVDFSVVSPSNPRWMLYLGGIGMLIFIL LVILGASNAVNITDGLDGLAIMPTVICSTILGVIAYFTGHIELSSHLQLYYTSGIGEITI FLAAICGSGLGFLWYNCYPAQIFMGDTGSLSLGGILGVVAVLLKQELLLPIIGAVFVLEA VSVILQVGSFKMRGKRIFRMAPIHHHFELGGLAETKVTMRFWIITILLGIFALGLIKLRG I >gi|224531371|gb|GG658181.1| GENE 62 61550 - 62851 1736 433 aa, chain + ## HITS:1 COG:FN1458 KEGG:ns NR:ns ## COG: FN1458 COG0771 # Protein_GI_number: 19704790 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Fusobacterium nucleatum # 1 433 23 454 454 475 58.0 1e-134 MKKAMVLGMGISGNGAKTLLEKEGYMVIAVDDKLAMSSEEAMKYLDDIEVFIKSPGVPYT PLVKAVQEKGIKVQDEIEIAYQYMVKTNRNMTIVAVTGTNGKTTTTSKIAELLNYAGKKA AAAGNIGRSFVDVLLSEENYEYAVLELSSYQLENVYEFTPYISLVTNLTPDHLTRYETLK DYYDTKFRICQNQKEENSFFLYNIDHEELRKRENLMKGKKISLSKEQDADTCVRNGKIIF QEEEIMQVSELSLKGNHNLENSLFIITAGKLLGLDTKVIREFLMNTEPLEHRMERCFQYG KVQFINDSKGTNIDSAKFALEAYPGCILICGGFDKKVDLNPLADIIIKQVKEVYLIGVIA DKIKALLLERNYPADHIYSLETIENSLLDMKKRFTKEDEELILLSPATSSFDQFKSFEHR GQVFKELVCKIFG >gi|224531371|gb|GG658181.1| GENE 63 62865 - 63932 1270 355 aa, chain + ## HITS:1 COG:FN1457 KEGG:ns NR:ns ## COG: FN1457 COG0707 # Protein_GI_number: 19704789 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Fusobacterium nucleatum # 1 355 4 357 357 424 57.0 1e-118 MKKVILTTGGTGGHIYPALAVAEGLRNKGIETLFIGSSTRMEKDIVPKANFRFIGLDIYP PRSAKTVIKYLKSFIHAYHILKEEEPDAVIGFGNYISVPVLTMAFLLRKKIYLQEQNADL GFANRLFYRFAQFTFLAFEHTYNTVPIKYQKKFIVSGNPLRSEIHEVNYEEARERLKVQK DEKVLLITGGSLGAQEINNAVLKYWEHFFQAKNVRVYWATGKQNYEEVQEKVKRAKMTDT IKDYFENMIHIMAASDLVVCRAGALTISELIALQKPAVIIPYSLQKVGQYQNAKILEERH SAVIYTNQESEQAIEKVIELLSNEEELRTMGIRMRSLQTPHAVNTIISNLDIWRD >gi|224531371|gb|GG658181.1| GENE 64 63940 - 65283 1674 447 aa, chain + ## HITS:1 COG:FN1456 KEGG:ns NR:ns ## COG: FN1456 COG0773 # Protein_GI_number: 19704788 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Fusobacterium nucleatum # 1 446 9 464 468 517 58.0 1e-146 MEKIYFVGINGIGMSGLAKIMKCQGYDVVGADLARNYVTEELESLGITVYPEHKACQMQG RDSLIASSAIHSDNPEFQYAKQHNIPLMKRGELLATLLNNKVGIAVAGTHGKTTTSSMMS AVMLSLDPTIVVGGILPEIGSNAKVGMGEYFIAEADESDNSFLFMKPKYAVVTNIEEDHL ETHGNLENIEKSFRQFVEQTERKVLVCTDCANVRAVFSENEKIMTYGMDYEANIMAKNVE IVNGKTSFEVLIQGENQGRFYISIPGKHNILNSLPVIYFSLLFGVPKEEIQDKLLHFRGS KRRYDVLYWDQENNRKIIDDYAHHPTEIQATLKGVKSIEKGKIIGIFQPHRYSRVHFLLE RFAHCFEGLDELILLPIYSAGEQNESGVSEKDIAKIIPTIPVTCIESKERVVERIMEETR EDNHIFIFMGAGDISKLAHEVADRLQK >gi|224531371|gb|GG658181.1| GENE 65 65296 - 66135 1214 279 aa, chain + ## HITS:1 COG:FN1455 KEGG:ns NR:ns ## COG: FN1455 COG0812 # Protein_GI_number: 19704787 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Fusobacterium nucleatum # 1 279 1 281 281 333 64.0 2e-91 MKVLEQQIMKEYSNMKIGGKAKRLIIVENKEEMKEAYEKYDSLLLLGNGTNLLLNDGYLD YNFVSTEKLNRIEKLEKNRVYVEAGVDLDTLLAFMEKENLSGIEKMAGIPGSIGGLTYMN GGAFGTEIFDFIDEIEVLTEGNMIQSIKKKDLDIRYRKTEIQEKKWIVLSVIFQFQTGFD KSTVEEIKKSREEKHPLDKPSLGSTFKNPEGDFAARLISEAGLKGRKVGGAQIAEKHPNF VLNLGEATFQDILDTLDLVKKTVKEKFGVQLEEEIIIIR >gi|224531371|gb|GG658181.1| GENE 66 66149 - 67015 1329 288 aa, chain + ## HITS:1 COG:FN1454 KEGG:ns NR:ns ## COG: FN1454 COG1181 # Protein_GI_number: 19704786 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Fusobacterium nucleatum # 1 287 1 286 287 365 65.0 1e-101 MRIAVFMGGVSSEKEVSIRSGEAILESLQRQGYDAYGVVLTKENMISAFQDENYDLAYLA LHGGAGENGEIQSVLELLGKKYTGSGVAASAISMDKLLTKKIASLEGVRMAKTYSNVAEI SSYPVMVKPSKDGSSVGIHVCNNQEEVEKALQEISGYAMIEEYIQGEELTVGVLNGKALG VLKIIPQAADIYDYESKYAAGGSIHEFPARIAKIAYEEAMVNAVKIHEALGMKGVSRSDF ILKDDQVYFLEVNACPGMTKTSLVPDLATLQGYTFDDITRMLVEDALA >gi|224531371|gb|GG658181.1| GENE 67 67214 - 67714 404 166 aa, chain + ## HITS:1 COG:no KEGG:FN1453 NR:ns ## KEGG: FN1453 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 162 20 189 191 107 37.0 1e-22 MKKLKQELSKDIRLESVEISHDKVGELNFKIEEKELLYYAQIGERIYLMDKKGEVFGYFN ERDKMSLPLLVSKDGKNVSSLVEVLSNLQEYSFYDSISQIYEVDRNRIDIILIDGTKIFT NTSVDKKKYKVAMALYFEIIKNKKIAYMDLRFQDFIIRYVEDDNGR >gi|224531371|gb|GG658181.1| GENE 68 67704 - 68963 1603 419 aa, chain + ## HITS:1 COG:FN1452 KEGG:ns NR:ns ## COG: FN1452 COG0849 # Protein_GI_number: 19704784 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Fusobacterium nucleatum # 2 372 3 377 447 248 38.0 2e-65 MEDNITKLIMDIGNSHIKLLVGEVSTDFTKIKVLQYVEVPTKGMKKSVVESSDELSYAIQ KALNSLDNPEHREIGKVTIGVGGKYIQSKTRKLSIEFEEREVQESDLERLYELAEECLEP EDLVLKREMYNIKINNAGIVKNPIGLVASRLEANVHLIYVDREDIEKMTDAIVEAGFDIE NIYLNAYASLKSTLVDEESTKMGVALVDIGEGVTDIIISKNHKIIYSKSANLGGIHFMSD IMYLFHVSEEEAREVYSSYMKGEMGEQYISSSGKCFVKEDVEKIIDARIGDIATFILNTI QESGFTGYLGQGMVLTGGVASLDRLVGKINAQTGGIVRRKKPLPIRGLEKPEYRMATVVG LFLEAIEEEMEAQQKRIYEAMREEEVEDDLEELLEDTRSEKKSSRETFGKIKKWISYFI >gi|224531371|gb|GG658181.1| GENE 69 68987 - 70066 1596 359 aa, chain + ## HITS:1 COG:FN1451 KEGG:ns NR:ns ## COG: FN1451 COG0206 # Protein_GI_number: 19704783 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Fusobacterium nucleatum # 21 359 22 359 360 377 64.0 1e-104 MLIEQDLVKIKVLGAGGAGGNAINDMISSGVGGVEYIAANTDSQDLNKSLADSRLQLGEK LTRGLGAGADPSIGKQAAEEDIDKIKQLLEETDMLFITAGMGGGTGTGAAPVIARVAKEL GILTVAIVTRPFSFEGKKRKNNADLGVRQLKETVDALVIIPNDKLFELPDKTITLQNAFK EANNILKIGIRGVADLMIGNGLINLDFADVRATMLNSGIAVLGFGEGEGENRAMKATEKA LQSPLLEKSIQGASKILINITGSPDITLMEAQTISETVRDAAGKTAEDVMFGLVVDPEVG DKVLVTIIANNFVDETQDAEPFINLKPQGNKEEEMLTENKEAHYNDDDIDLPPWLRSKK >gi|224531371|gb|GG658181.1| GENE 70 70161 - 70445 400 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|197736538|ref|YP_002165316.1| ribosomal protein S6 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 94 1 94 94 158 84 2e-37 MKKYEIMYIISPTVLEEGRDAIIEKVSELLTSNGANILKTEKWGERKLAYLIDKKKTGFY VLTTFEIDGTKLAEVESKLNITEEVMRYIVVKQD >gi|224531371|gb|GG658181.1| GENE 71 70480 - 70698 346 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736139|ref|ZP_04566620.1| SSU ribosomal protein S18P [Fusobacterium mortiferum ATCC 9817] # 1 72 1 72 72 137 97 4e-31 MAEFRRRRAKLRVKAEEIDYKNVDLLKRFVSDKGKINPSRLTGANAKLQRKIAKAIKRAR NIALIPYTKIEK >gi|224531371|gb|GG658181.1| GENE 72 71591 - 71707 86 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSQSYFIKSLFDIQDKNITFLPLEIEKEYKYHTFSKVS >gi|224531371|gb|GG658181.1| GENE 73 71951 - 72940 1353 329 aa, chain + ## HITS:1 COG:FN0511 KEGG:ns NR:ns ## COG: FN0511 COG1052 # Protein_GI_number: 19703846 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Fusobacterium nucleatum # 2 328 5 331 335 400 62.0 1e-111 MRVLFFDAKSYDKENFDAYKEKYGFDIKYLKVKLNEETVDFVKGYEIISIFVNDTVNPPV IDKLIEYGVKLIVLRCAGYNNVDVNYINGRIKLVRVPAYSPYSVAEYTASMVMTLNRKIH KAYVRTREGNFSINGLMGFDLHKKTVGVIGAGRIARIFIKIMRGFDARVIAYDPYPNESF ARDLGYEYVDLDTLYRESDIISLHCPLTRENTYLINRESMKKMKDGVMIVNTGRGRLIDT IDLIEALKDKKVGAAALDVYEEEAGYFFEDMSSSVIEDDILGRLLSFNNVLLTSHQAYFT KEAFRDITLTTLENIQSFLQGKELENEIK >gi|224531371|gb|GG658181.1| GENE 74 72999 - 74498 2315 499 aa, chain + ## HITS:1 COG:FN0023 KEGG:ns NR:ns ## COG: FN0023 COG1288 # Protein_GI_number: 19703375 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 499 1 499 499 677 71.0 0 MKKWKIPDTFVIIFFVVLLAGFLTHVVPVGSFDMKDITYTTSDGAEKTKSVPVAGSFHYA LDEQGQPLVKGIKVFEPGGEIGLTNYVYEGLVSGDKWGTAVGVVAFILVIGGAFGIILKT GAVETGLYALISKTKGSEILIIPLVFILFSLGGAVFGMGEEAIPFAMILVPIIIGLGYDS ITALMITYCSTQIGFATSWMNPFSVAVAQGVAGIPVLSGSGFRIFMWIFFTAVGTIFTMR YAKKVKATPNLSVAYETDKYYREDYKAEATEGQKFTLGHKLVLLVVVLGMIWVIWGVIKQ GYYLPEIATQFVIMGIISGIIGVVFHLNDMTTNDMASSFRKGAEELVGAALVVGMGKGIV LVLGGTSAGEPSVLNTILNWVATGMEGMHSAFSAWVMYIFQSCFNFFVVSGSGQAALTMP IMAPLSDLLGVTRQVAVLAFQLGDGFTNLIVPTSGLLMAILGVAKLDWGTWVKFQWKFQA LLFILGSIFVIGASLVNFS >gi|224531371|gb|GG658181.1| GENE 75 74612 - 74869 390 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237745230|ref|ZP_04575711.1| LSU ribosomal protein L28P [Fusobacterium sp. 7_1] # 1 85 1 85 85 154 87 3e-36 MQRCEITGTGIISGNKISHSHRLTRRVWKPNLQVTTILVNGNPIKIKVCSRTLKSLKGAS EVEIMNILKANAATLSERLKKHLSK >gi|224531371|gb|GG658181.1| GENE 76 75051 - 77387 3291 778 aa, chain + ## HITS:1 COG:FN1581 KEGG:ns NR:ns ## COG: FN1581 COG1193 # Protein_GI_number: 19704902 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Fusobacterium nucleatum # 1 778 1 778 778 1013 71.0 0 MSIHSHRVLEFDKLKEKVMTYLAIEKNVEEIINLKPFTDLSSLQQEFVYVQDCMDFMQYD GGLDVRHLKDICALTEKIKLIGTYLEVDELWDININLRFFRIFQTQLEDLGKYKALRDYM KQVSPLRLIEDLISKAIDAEKQIKDDASLDLRDIRIHKKVLAQNIRRKFDELFEEPSVSA AFQERIITERDGRMVVPVKLDFKGLIKGIEHDRSSSGQTVFIEPLSIVSLNNKMRELETK EKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQAKANFGLEEACHVPMVQGKEILY LEKARHPFIPKEKVVPLTFEIGKDYKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPA SQNSRIGFFQGVFADIGDEQSIEQSLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDP TEGSAFAMSIIDYLKEKKCNSIITTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLM GIPGESNALTIAKRLGIPQEIIEKAQSYISEDNKKIELMINNIKNKSESLDKMQTELTGL REAAKMNQEKWEEERKALEREKNEILKKAYEDSEKMMNEMRAKASALIEKIQKEEHSKEQ AKQIQKNLNMLSSALKEEKNKTITLNKTMKKKAHFKEGDRVFVKNINQFATVLKINAMKE SAQVQAGILKLEVPFEEIRVTEEKKEKTYQVQVHKKIAVRSEIDLRGKMVEEGIHELETY LDRALLNGYHEIYVIHGKGTGALRNGILEYLKTCPYVKDYRIGGHGEGGLGCTVVTLK >gi|224531371|gb|GG658181.1| GENE 77 77363 - 78061 346 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 10 227 2 216 234 137 36 4e-31 MHCGYSKIKKKMSFILACAGIGKRMKLGYPKQFLEYDGKPLFLKPLLCAEQSEYVDEIII VSQEEYLEDIKTLCQKEGIHKLKAVVTGGRERQDSIFAALKKVSIDMDYVMVQDAVRPFC KEKYIRESYEQLEAGYMGTVVGVAVKDTIKEITEDGFVKNTPKRSSLFAAHTPQAFQKEI LKEAYEKAYQDKFLGTDDASLVERLQLSIKIIVGDYDNIKITTPEDLKILNP >gi|224531371|gb|GG658181.1| GENE 78 78123 - 79544 2103 473 aa, chain + ## HITS:1 COG:FN1579 KEGG:ns NR:ns ## COG: FN1579 COG0215 # Protein_GI_number: 19704900 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 471 1 471 473 665 68.0 0 MIKIYNTLSASLDTFTPRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYRGYK VTYVQNFTDVDDKMIKRANEEGTTVEDVAHRYIQAYLEDMKSLHIKEEGMIRPKATEHIQ EMIDMIQNLIDKGHAYESNGDVYFRVATYHQEYGALSKQKIEDLQSGARIEVTEIKESPL DFALWKASKPGEPSWKSPWGEGRPGWHIECSAMSNKYFGDSFDIHGGGQDLIFPHHENEI AQSKCSCGGSFANYWMHNGYINIDGVKMSKSLGNFVLLRDILKHFSGKVIRFFMLSAHYR KPMNFSDAELSQAKIALERIENSLIRANEISETSIALEGSAGVELKKALEDTKEKFIEAM DEDFNTAQAIGVIFELVRELNKTLDSSYNQEAYVIVKETADYLYHILYDVLGIEVEVETK VENLTVDLVEFILELRREARAEKNWALSDRIRDRLAELGIQIKDGKDSTTWRV >gi|224531371|gb|GG658181.1| GENE 79 79532 - 79909 171 125 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 [Bacillus selenitireducens MLS10] # 8 114 12 121 141 70 34 7e-11 MESVDIREMSGLALAYLGDTVWETQVRLYWVKKGFNISHLNYKVKKFVNAKAQSHYYQLL KEELSEEENAIMRRAKNANIRSFPKSCSNQEYREATAFEAILGAWFLQGEIDKIQAFANR ILEKE >gi|224531371|gb|GG658181.1| GENE 80 79922 - 80944 1521 340 aa, chain + ## HITS:1 COG:FN1577 KEGG:ns NR:ns ## COG: FN1577 COG1077 # Protein_GI_number: 19704898 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Fusobacterium nucleatum # 4 340 6 342 342 546 86.0 1e-155 MAFFKLNRGLGIDLGTANTLVYSKKHKRIVLNEPSVVAVERETKKILAVGNEAKEMLGKT PDSIVAVRPLSEGVIADYDITEAMIKYFIKKVFGSYSFFMPEIMICVPVDITGVEKRAVL EATISAGAKRAYLIEEARAAALGAGMDISAPEGNMIIDIGGGSTDIAVISLGGTVVSKTI RIAGNNFDSSIIKYVKKTHNLLIGDKTAEEIKIKIGTALPLEEEETMEVKGRDLMMGLPK TVTISSEEIREAIMDSLMEIVRCIKSVLEQTPPELASDIVDKGMVMTGGGSLIRNFPEMV EKYTSLKVTLAENPLESVVRGSGLALEQVKVLRKIEKAER >gi|224531371|gb|GG658181.1| GENE 81 80944 - 81816 729 290 aa, chain + ## HITS:1 COG:FN1576 KEGG:ns NR:ns ## COG: FN1576 COG0470 # Protein_GI_number: 19704897 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Fusobacterium nucleatum # 1 289 1 287 289 152 34.0 5e-37 MLEDWIRQDISKNKKSGTYLFYGEDSSRLEKAVLSFAKALCCPKEKDYYCDSCSVCNRIQ KGVYADVHVLENLKIEDIREAETSFHESSYEGERKIFILPNIQDLRKESANALLKSIEEP GDGTFFLLWSTRKNILATIRSRAIQVFVPRVNYQELGVSKECYHFFEGNEQDILNCLKEN INWQEHQSYKNIQKNIVSYLETQQTSSKVKVYQSLIDFLEVKENLSVVEILWFIEELVGS PCERKDFAWIFHYCLMQERYQGKLEEKLMLSKMLNFPINNKVLFANLFLK >gi|224531371|gb|GG658181.1| GENE 82 82293 - 82979 686 228 aa, chain + ## HITS:1 COG:FN0729 KEGG:ns NR:ns ## COG: FN0729 COG0588 # Protein_GI_number: 19704064 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Fusobacterium nucleatum # 1 228 1 228 228 305 62.0 5e-83 MKLVLVRHGQSEWNLQNRFTGWADVDLSETGIREAKEAGRELLAQKIDFDLCFTSYQKRA IKTLQYILEELDALYLPIIKTWKLNERHYGALQGLNKSETAKKFGEEQVHIWRRSFDIQP PAMEKEDERSPRYDKRYRDLKEEEIPLSESLKDTIVRVLPYWNEVIAPEIKKGKNILIAA HGNSLRALVKHLLKISDEKIMELNLPTGKPLIFEITEELEILEAPKLF >gi|224531371|gb|GG658181.1| GENE 83 83012 - 83839 850 275 aa, chain + ## HITS:1 COG:FN0127 KEGG:ns NR:ns ## COG: FN0127 COG0731 # Protein_GI_number: 19703472 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductases # Organism: Fusobacterium nucleatum # 1 275 1 282 284 236 45.0 4e-62 MARYVFGPVPSRRLGISLGMDIVIPKTCNLNCVFCECGPTKDWTIERQHFISYEDFIQEL ELALKEVTPDYVTFSGSGEPTLSLDLGKIIRYIKKEHPSIKIAVITNSLLLHREEVLEEI QEADLIMPSLHTVRQEIFEKIVRVYPNYRIETVLEGLQKLCSSFHGDIDLELFLIEGLNT SFSDLKAYATFVKTLSYRKLQLNSLDRPGTESWVKPVPYHKLLEIKEYLEQEGLSGVEII GKFNTNQKITEDESRIKAMKERRKYTEEEIKSLYK >gi|224531371|gb|GG658181.1| GENE 84 85617 - 88349 3641 910 aa, chain + ## HITS:1 COG:FN0735 KEGG:ns NR:ns ## COG: FN0735 COG5295 # Protein_GI_number: 19704070 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 687 902 384 595 617 112 37.0 3e-24 MLEEKSIKNWLKRKVRFTQALLVAFLITGGIASANVVVGTGTGNGDNTITDSEVNVLGSK NAIKKEKKSSVVGDENTVEESEDVNVVGNKNTVKNSNRQNVMGSDNEITGRDQGTNSGKK RTTVDTIIGGGNKISGNNTYMKGYESLTVIGNNNESVNPSSGIVIGDNQQIGTIDETVVI GSMRPEDKKDRNNAQGHKSVIIGYQAGGKDEQCSGGFNVAIGHSARVDGWMGAVTGYNSH IKAKDGHFLSIYGAENKISGDMGDGWVNMRAYANSIVGSWNKIEDSNNSMIFGAGNKVSH AMSITEKVEEVNGNGVYLSYRSQGGEAYSDINNKDMADLAMLNGGSVMTLGNANVIDYAI RSQVLGTGNILKGTNTKESTMNSINGYRNIGTNIKNMSLLGNGNKVSETKNGVVIGDYHE LNGGNNNIILGSMETREEEETRTYIPMISTDEKPKPLEYKVKKQVAIKKHKDNISNAVMI GYNTDVEKDGGVALGSEAVSNIDKGKQGFDAAVNAVSAKDDIAWKSTRAALSVGDVEKKV TRQITGVAAGTEDTDAVNVAQLKSVLSHPFHVFSGGNASTKGTDISNGTDLTFYKMNWEF RDGLKAAVEGEGENRRVVVSLDKENLKKDPDFKGPKGDKGDTGAVGPKGEPGKDGKDGKN GEGAKVLAGNNIKVDSKEKKQGEDKVIENTISLTEDIKVKTVSTDSINVGDTVKISKEGI NAGKQKITNVADGKADSDAVNVKQLNEVKKEVKENTKEMTKQLYHLGEEIDGVRSEARGI GALSASLAALHPMQYDKAKPNQVMAGVGTYRDKQAVAVGMTHYFTENLMMTAGVSLAETS NTKAMANVGLTWKFGSKEEGEDIKISEDVILKEQLGKLTMENRNQKQENLELKSRVEKLE QKLEAILNQR >gi|224531371|gb|GG658181.1| GENE 85 88381 - 89805 1900 474 aa, chain - ## HITS:1 COG:FN0107 KEGG:ns NR:ns ## COG: FN0107 COG0591 # Protein_GI_number: 19703455 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Fusobacterium nucleatum # 1 468 1 469 482 624 70.0 1e-178 MAGIETFITFIIYLLFLMGIGVYFYTKTNTHEDYVLGGRGVGYWVTAMSAQASDMSGWLL MGLPGAVFLNGLTEIWVIIGLAAGTYANWKWVAPKLRVQTEETDTLTLPTFLTKRLGDPT GMIRTFSAIAILFFFTIYSSSGLVAAGKLFETILGIDYTWGVLIGGGTIIVYIFLGGYLA CCWTDFFQGVLMFFAITIVPVMAYFQGGGINGIEMAMRAREISLNIFSRTENIDIFIILS GLAWGLGYFGQPHILVRFMSIDKVEELWKSRLIAMIWVVISLVGAIAVGVTGIAVFPNIT ELNGDAEKIFIYMIAKLFNPWIGGILFAAILSAIMSTISSQLLVSSNTLTEDFYKYIKRN PSNKELMWVGRLSILVIFFIAGILSLNPNSKVLSLVSYAWAGFGAVFGPAILITLYKKTI HWKSILLGMIVSAITVVVWKHTGLGNTLYEILPGFLVNTVIILCTNQYLKTERE >gi|224531371|gb|GG658181.1| GENE 86 90187 - 90276 223 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDRFITELGYQEIAIRIVAAIFIGRDNWI >gi|224531371|gb|GG658181.1| GENE 87 90320 - 90898 887 192 aa, chain + ## HITS:1 COG:FN0215 KEGG:ns NR:ns ## COG: FN0215 COG1285 # Protein_GI_number: 19703560 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Fusobacterium nucleatum # 1 189 51 242 244 155 44.0 5e-38 MVCLGAAITSIIQDRMRIDVLRLSVTHPEAMQAIKLDLGRLGAQVISGIGFLGAGSIMRE RGTVEGLTTAAGIWATGCIGLAIGWGFYSLTLIATLAVIITLITLKKLEVSWIAKQYNAK ILVQYKQHIRGEDILEMSDYLKKIDVKVLGITKEEVEKTALFTVRLKKNAKVSDILLNLA SNEKIEQVRKED >gi|224531371|gb|GG658181.1| GENE 88 90900 - 91967 1370 355 aa, chain + ## HITS:1 COG:FN0332 KEGG:ns NR:ns ## COG: FN0332 COG0598 # Protein_GI_number: 19703675 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Fusobacterium nucleatum # 1 354 1 350 351 417 59.0 1e-116 MPNSHASRSKKNGLPPGSIVYTGENPDHEVSITIIYYNQEIFEKQVFHSVDEFRFNRRFQ GNAWINIDGISDVNYIKKIGRYFHIDNLTLEDLANPEQRVKLEEREEYLFLILKMLSLNL ITEEIEYEQLSFILEDNILITFQETPKDVFDGIRYRLESDKTKIRSLSTGYLAYTLIDAI VDNYFVILDEVEKEIDNLESKVIDKSEKEDLENILELKQSISSLKRFIAPLRELVAKLQT RGMRGYFSEDMRIYLNDLYDHSIITFETVEMLNSRVHELVQLYHSTVSNDMNQIMKILAV ISTVFMPLSFLTGLYGMNFRYMPELESPIGYFVLLAFMVLLVLGMLFYFKKKKWI >gi|224531371|gb|GG658181.1| GENE 89 92374 - 93417 305 347 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 [Lentisphaera araneosa HTCC2155] # 1 316 1 326 346 122 26 2e-26 MKKGFKFFCAMGLLALALVGCGGNKDAAAPEGEKKEARVIKVTTKFVDDEQTAKSLVKVV EKVNERSNGSLELQLFTSGTLPIGKDGMEQVANGSDWILVDGVNFLGDYVPDYNAITGPM LYQSFDEYLKMVRTPLVENLNKQAEEKGIKVLSLDWLFGFRNMITKKPVKTPEDMKGLKL RVPTSQLYTFTIEAMGGNPVAMPYPDTYAALQQGVIDGLEGSILSYYGTKQYENVKEYSL TRHLLGVSAVCISKACWDSLTDEERTIIQEEFDAGAQDNLAETIKLEDEYAQKLKDAGVT FHEVDADAFNKAVAPVYGMFPKWTPGIYDEIMKNLKEIREELAKEGK >gi|224531371|gb|GG658181.1| GENE 90 93485 - 93970 772 161 aa, chain + ## HITS:1 COG:FN1257 KEGG:ns NR:ns ## COG: FN1257 COG3090 # Protein_GI_number: 19704592 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, small permease component # Organism: Fusobacterium nucleatum # 10 154 1 145 147 150 68.0 1e-36 MRDLLKKFELYLGSVFISVTVVVVIMNVFTRYFLKFTYFWTEEVAVGCFVWTIFLGTAAA YRERGLIGVEAIVVLLPKKVRKVVEFFTFLLLVIISAIMFYFSLTYVMGSSKITSALEIS YSYINSGIVLSFALMTIYSVIFAVQCFKEMITGKDCKEIEG >gi|224531371|gb|GG658181.1| GENE 91 93982 - 95268 712 428 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020581|ref|YP_526408.1| ribosomal protein L16 [Saccharophagus degradans 2-40] # 1 427 3 429 435 278 35 1e-73 MEAFLPVIVLFVLFFLNIPIGFALMGSALFYFMFLNTTMAMNMVIQQFVTAVESFPYLAV PFFIMVGSVMNYSGISEELMNMAEVLAGHMKGGLAQVNCLLSAMMGGISGSANADAAMES KILVPEMIKKGFSKPFSAAVTAASSAVSPVIPPGTNLILYALIANVPVGDMFLAGYTPGI LMTLAMMITVHIISVKRGYQPSRERMARPAEIGRQAIKSIWALAIPFGIILGMRIGMFTP TEAGGVAVFFCFIVGFFIYKKLKLYHIPIILMETVKSTGAVMIIIASAKVFGYYMTLERI PQMITEGLMNFTSSPMILLMVINVLLLFVGMFIEGGAALVILAPLLVPAVKALGVDPLHF GVIFIVNIMIGGLTPPFGSMMFTVCSIVDVKLEDFIREVWPFILSLVIVLLVVTYSSSIA LFIPNLFR >gi|224531371|gb|GG658181.1| GENE 92 95284 - 96075 1045 263 aa, chain + ## HITS:1 COG:FN1255 KEGG:ns NR:ns ## COG: FN1255 COG0647 # Protein_GI_number: 19704590 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Fusobacterium nucleatum # 1 257 12 270 275 249 47.0 3e-66 MNRLKNKTCFLFDLDGTIYLSEHLIPGATDLLAEIRRQGKHFAFMTNNSSSAKKQYLEKM KRLGIEVTAKEILTSTDATLRYLKMQNMKKIVLLATPEVEKEFQEEGFTIIKERGKEADC VVLTFDLTLTYDKIWTAYDYLVKGLPYIASHPDYLCPLKEGFKPDVGSFISMFQTACHRE PLVIGKPNHYMVEEAMERFRVKKEDMVIVGDRLYTDIRTGLRSGVTAIAVLSGETTEDML KNTEDVPDYVFPSVKEIFDIMKK >gi|224531371|gb|GG658181.1| GENE 93 96300 - 96452 228 50 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|197735409|ref|YP_002164187.1| ribosomal protein L33 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] # 1 50 1 50 50 92 84 2e-17 MRVQVLLECTETKLRHYSTTKNKKNTPERLEIKKYNPVLKRHTIYKEVKK >gi|224531371|gb|GG658181.1| GENE 94 96586 - 96768 246 60 aa, chain + ## HITS:1 COG:FN2042 KEGG:ns NR:ns ## COG: FN2042 COG0690 # Protein_GI_number: 19705333 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Fusobacterium nucleatum # 1 57 1 57 58 62 56.0 2e-10 MSLFQDVRKEYSKVQWPKKKDIISSTVWVVVMAVILSIYLGVFDLIATRLLKNLVSLFGG >gi|224531371|gb|GG658181.1| GENE 95 96772 - 97362 974 196 aa, chain + ## HITS:1 COG:FN2041 KEGG:ns NR:ns ## COG: FN2041 COG0250 # Protein_GI_number: 19705332 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Fusobacterium nucleatum # 1 196 1 193 193 234 66.0 7e-62 MTKTEVKRWFMIHTYSGYEKKVKTDLEQKIETLGMTEIVSKILVPEEKSTEIVRGKEKVV FRKIFPGYVMLEMTAVREESDEGINYKVDSDAWYVVRNTNGVTGFVGVGSDPIPMEEHEV ENIFRVIGYKEEVREQQLYKADFEVGDYVKVLDGGFVNKEGRVAEMDYEQGKVKIMIDIF GRMTPVEVSFSSVEKM >gi|224531371|gb|GG658181.1| GENE 96 97399 - 97824 669 141 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237738811|ref|ZP_04569292.1| LSU ribosomal protein L11P [Fusobacterium sp. 2_1_31] # 1 141 1 141 141 262 94 1e-68 MAKEVIGLIKLQLPAGKANPAPPVGPALGQHGVNIMEFCKAFNAKTQDKAGWIIPVEISV YNDRSFTFILKTPPASDLLKKAAGIQSGAKNSKKEVVGKITSAKLRELAETKMPDLNAGS VEAAMKIIAGSARSMGIKIED >gi|224531371|gb|GG658181.1| GENE 97 97856 - 98593 1082 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237738812|ref|ZP_04569293.1| LSU ribosomal protein L1P [Fusobacterium sp. 2_1_31] # 11 245 1 235 235 421 88 1e-116 MTTYREEIKEMAKHRGKKYIEVSKLVETGKLYEVKEALELVAKTRTANFVETVEVALKLG VDPRHADQQVRGTVVLPHGTGKTVKILAITSGENVQKALDAGADYAGAEEYISQIQQGWL DFDLVIATPDMMPKIGRLGKILGTKGLMPNPKSGTVTPDVAGAVSEFKKGKLAFRVDKVG SIHVAIGKADFSADKIEENFKAFMDQIVRLKPAASKGQYLRSVAVSLTMGPGVKMDPLLV AKYVG >gi|224531371|gb|GG658181.1| GENE 98 98761 - 99273 758 170 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237738813|ref|ZP_04569294.1| LSU ribosomal protein L10P [Fusobacterium sp. 2_1_31] # 1 170 1 170 170 296 88 6e-79 MATQVKKEIVAELVEKIKKAQSVVFVDYQGIKVNEETALRRKMRESGAEYLVAKNRLFKI ALKESGVEDNFDEILEGTTAFAFGYEDPAVPAKVVFDLAKDKAKAKQDIFKIKGGYLTGK RVSIDEVEALAKLPSREQLLSMVLNSMLGPVRKLAYATVAIADKKEAAGE >gi|224531371|gb|GG658181.1| GENE 99 99314 - 99679 547 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237738814|ref|ZP_04569295.1| LSU ribosomal protein L12P [Fusobacterium sp. 2_1_31] # 1 121 1 121 121 215 91 2e-54 MAFDREKFIADLEAMTVLELKELVTALEDHFGVTAAAPVAVAAAGPAEAAEEKTEFDVVL KSAGGNKIAVIKEVRAITGLGLKEAKELVDNGGVIKEAAPKEEAEAIKEKLTAAGAEIEV K >gi|224531371|gb|GG658181.1| GENE 100 99860 - 103414 838 1184 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 889 1142 1085 1390 1392 327 55 3e-88 MGKLVERLNFGKIKERGIMPHFLEFQLNSYEDFLQMKVAPNNRENKGLESAFREIFPIES SSNGEIRLEYVSYELHAAEPPLNDELECKKRGKTYSDSLKVRLRLFNKKSGNEIQESLVY FGEVPKMTERGTFIINGAERVVVSQLHRSPGVSFNKEVNIQTGKDLFSGKIIPYKGTWLE FETDKNDFLSVKIDRKKKVLATVFLKAVDFFKDNTEIKEHFFEVKELDLTEFYEKYANDT EELLSVVRTKIESSFLKEAIYDEETGEIIAEEDAVISEALISKIIENKIAVLSYWEVKPE DLLIANTIANDTTKNSDEAVTEVFKKLRPGDLVTVDSARSLIKQMFFNVQRYDLEPVGRY KMNKRLKLEIDENEVLLTPEDVLGTIQYVIDLNNGESHVHTDDIDNLSNRRVRGVGELLL MQIKTGLLKMSKMVREKMTIQDIETLTPQSLLNTRPLNALILDFFGSGQLSQFMDQSNPL AELTHKRRISALGPGGLSRERAGFEVRDVHDSHYGRICPIETPEGPNIGLIGSLAIYAKI NQYGFIETPYVAVKDGVADLNDIRYLAADEEEGMFIAQADTKLGEHNELLEPVTCRIGPE ILDVEAKRVHYLDISPKQVVSVSAGLIPFLEHDDANRALMGSNMQRQAVPLLRTQAPFIG TGLERKVAVDSGAVVTTKVDGTVSYVDGKKIVIETEDKREYTYRLLNFERSNQSMCLHQS PLVNLGDKVKAGDIIADGPATSKGDLALGKNILMGFMTWEGYNYEDAILISDRLRKDDVF TSIHVEEYEIEARNTKLGDEEITREIPNVSEAALRNLDANGIIMVGSEVEPGDILVGKTS PKGETEPPAEEKLLRAIFGEKARDVRDSSLRMPHGSKGTVVEILELSRENGDELKAGVNK AIRVLVAEKRKITVGDKMSGRHGNKGVVSRVLPAEDMPFLEDGTHLDVVLNPLGVPSRMN IGQVLEVHLGMAMRTLNGGTHIATPVFDGATEEQIKDYLENQGHPRSGKVTLYDGRTGDK FDNKITVGIMYMLKLHHLVEDKMHARAIGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEA YGASNILQEMLTVKSDDVTGRTKTYEAIIKGEEMPDSDLPESFKVLLKEFQALALDVELC DENDNVINVDEELNKEDTTLEYSPSDMLELEDDEDEDDYEDDEE >gi|224531371|gb|GG658181.1| GENE 101 103451 - 107419 5295 1322 aa, chain + ## HITS:1 COG:FN2035 KEGG:ns NR:ns ## COG: FN2035 COG0086 # Protein_GI_number: 19705326 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Fusobacterium nucleatum # 1 1318 1 1319 1319 2109 81.0 0 MGIRNFEKIKIKLASPEKIEEWSYGEVTKPETINYRTLNPEKDGLFCEKIFGPTKDWECA CGKYKRMRYKGLICEKCEVEVTKSKVRRERMGHIALAAPVSHIWYSKGTPNKMSLIIGLS PKELESVLYFARYIVTESEEESLEIGKILTEKEYKLFKQLYGTKFEAYMGAEAILKLLER INLEELRIELEAELEEVSSAQKRKKIVKRLKIVRDFIASGNRPEWMILKNVPVIPADLRP MVQLDGGRFATSDLNDLYRRVINRNNRLKKLLEIRAPEIVVKNEKRMLQEAVDALIDNGR RGKPVVAQNNRELKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPSLKMNQCGIPKK MALELYKPFIMRELVKRELATNIKTAKKLVEEADDKVWDVIEDVIQDHPVLLNRAPTLHR LSIQAFEPVLIEGKAIRLHPLVCSAFNADFDGDQMAVHLMLSPEAIMEAKLLMLAPNNII APSSGEPIAVPSQDMVMGCYYMTEKKKGAKGEGKAFSNIDQLLTAYQNKVIDTHALVKVR VNGEMIETTPGLVMFNEILPVQDRNYQKTIGKKELKQLIAYLYDEHGFTETADLINKLKN FGYHYSTLAGISVGVEDLVIPEEKKHLLAAADEQVEQIDADYKAGKIINEERYRKTIEVW SKTTDAVTKAMMDGLDKFNPVYMMANSGARGNTNQMRQLAGMRGNMADTQGRIIETPIKA NFREGLTVLEFFISSHGARKGLADTALRTADSGYLTRRLVDISHEVIVNAEDCGTMQGIE VGDLISGGKVIEKLAERIKGRVLAEDLVYNGEVLATRNTMIGKELLREIDEKGIKKVKIR SPLTCALEKGVCKKCYGMDLSNLKEILLGEAVGVVAAQSIGEPGTQLTMRTFHTGGVASA SAAITQIKSENGGRISFRDIHTLNLNGEEIVVSQAGKVIVADNEYEVSSGSILKVKEGDI IEEGTVLVTFDPYHIPLIAAQDGKVEYRELTPKKTHDEKYDVWQSLVVKAMDSGDVNPRV HILDKDGKKLGTYNIPYGAYMMVEDGAMVKKGDILAKIMKIGEGSKDITGGLPRVQELFE ARNPKGKAMLTEIDGRVEINNRKKKGMRVVTVKSLDGEGEQREYLVPVGERLIVTDGLKV KAGDKITEGAISPFDVLNIKGLVAAEQFILESVQQVYRDQGVGVNDKHIEIIVKQMFKKV KIVDSGASLFLEDEVVEKRLVDLENKELAEKGKALIQYEPIIQGITKAAVNTGSFISAAS FQETTKVLSNAAIEGKVDYLEGLKENVIIGKKIPAGTGFSAYKNVAMKVQEEFGTELEET EE >gi|224531371|gb|GG658181.1| GENE 102 107480 - 108358 1075 292 aa, chain + ## HITS:1 COG:FN2034 KEGG:ns NR:ns ## COG: FN2034 COG1561 # Protein_GI_number: 19705325 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Fusobacterium nucleatum # 1 292 1 292 292 262 55.0 5e-70 MRSMTGYAKLIYEDEKYALQMEMKSVNNKNLSCKIKLPYNLNFLETKIRNEIAAKVLRGS VELRIELEEKEENLEAIQYDKNLSRAYFDTLSSMEKELGEVFSNKMDFLVRNFNVLKKGN NEVSEEEYSQFLLPKVQELLLPFLESRQEEGNRLQLFFLEKFEILKSYVTKIEEYQPSVV ERYKEKLLARLQTCREDLHFEENDILKEVMIFTDRSDISEELSRLKSHLQQLEKELKSKE LGLGKKIEFLLQEIFRELNTTGVKSNLYEISNLVVSAKNELEKIREQIMNIE >gi|224531371|gb|GG658181.1| GENE 103 108371 - 108934 765 187 aa, chain + ## HITS:1 COG:FN2033 KEGG:ns NR:ns ## COG: FN2033 COG0194 # Protein_GI_number: 19705324 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Fusobacterium nucleatum # 1 181 1 181 185 237 68.0 1e-62 MPKGNLYVVSGPSGAGKSTICRKVRKMLGINLATSATTREPRTGEVHGVDYYFLSHAEFE KKIQEGAFLEYAKVHNNYYGTLKSEVENRVNQGEKVILEIDVQGGLQVKALYPDAHLIFF KTPNLEQLEARLRGRKTDSEETIQLRLKNSIEELKCEEKYDICIVNHTVEQACNDLIQII EEKENLS >gi|224531371|gb|GG658181.1| GENE 104 108931 - 109131 350 66 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_0184 NR:ns ## KEGG: Ilyop_0184 # Name: not_defined # Def: DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) # Organism: I.polytropus # Pathway: Purine metabolism [PATH:ipo00230]; Pyrimidine metabolism [PATH:ipo00240]; Metabolic pathways [PATH:ipo01100]; RNA polymerase [PATH:ipo03020] # 1 63 1 63 70 70 60.0 3e-11 MKKDITYDELLEKIPNKYILTIVGGERARELHAGATPLTKTAKKDTNLKKVFREIIDGKI HYEEDK >gi|224531371|gb|GG658181.1| GENE 105 109115 - 110110 1146 331 aa, chain + ## HITS:1 COG:FN2031 KEGG:ns NR:ns ## COG: FN2031 COG1477 # Protein_GI_number: 19705322 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Fusobacterium nucleatum # 19 324 2 313 320 342 58.0 7e-94 MKKINKILIVIFCLFLGKISYAKEIKYEESKFLFGTYIKITSYSESTSTAKKAIQAAFQE IERIDKKFNSKTEGSLIYQLNHSSNKEISLDAEGKFLFQTIQKAYLLSHKKYDITISPLL RLWNFENPEKAKIPNKISLEKILKEVDFEKIKIEGNRLRLLSPVKEIDTGSFLKGYALAR AEKVLKEKGLKSAFISSISSIDLLGSKPGGKPWKIALENPTNANDILGVLSLQDKALGVS GDYQTYVEIQGKRYHHILDKATGYPVADKKMVVVICKDGFEADVYSTTFFLMPIAEILNY ANKMANFEVMIVDKNMKFHMSKGFSQYFSKK >gi|224531371|gb|GG658181.1| GENE 106 110179 - 112212 3632 677 aa, chain + ## HITS:1 COG:FN2030 KEGG:ns NR:ns ## COG: FN2030 COG3808 # Protein_GI_number: 19705321 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Fusobacterium nucleatum # 6 677 8 671 671 845 81.0 0 MEQMFMYFGIIAGIISLVAAFYYAKKVESYSINIPRVAEITEAIREGAMAFLTAEYKILI WFVIAIAILLGIAISPFTAVAFVLGAVTSAIAGNIGMRIATKANGRTAIAAKEGGLAKAL DVAFSGGAVMGLSVVGLGILMLSIVMLVLTGMGMELSTVAAELTGFGMGASSIALFARVG GGIYTKAADVGADLVGKVEAGIPEDDPRNPATIADNVGDNVGDVAGMGADLFESYVGSII AAVALGTFIAANEAGMTAIGYIFAPLVLAGLGIIASILASFTVKTNDPNAVHHKLETGTR IAGLLTIIASFGVVKYFELPLGVFWAIVAGLVAGLVIAYFTGLYTDTHTKAVNRISDAAS TGAATAIIEGLAVGMESTVAPIIVIAIAIIIAFQQGGLYGIAIAAVGMLATTGMVVAVDA YGPVADNAGGIAEMSELPPEVRETTDKLDAVGNSTAAVGKGFAVGSAALTALSLFATYKQ TVDSMTDFDLVIDVTDPEVIVGLFIGGMLTFLFAALTMTAVGKAAIEMVEEVRRQFREIP GIMEKKAKPDYKRCVEISTHSSLKQMILPGVLAIVAPVIVGVWSVQALGGLLAGALVTGI LMAIMMANAGGAWDNGKKQIEAGYKGDGKGSDRHKAAVVGDTVGDPFKDTSGPSMNILIK LMTIVSVVLVPFFVKFI >gi|224531371|gb|GG658181.1| GENE 107 112174 - 112413 70 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHTSPLFFFLILLYYFLFLDIFVYYMKNFILCQTIILKNFLIKNIKKWDYLFYNSNPISI FYMFFINLNKFYKERYQYY >gi|224531371|gb|GG658181.1| GENE 108 112412 - 113650 1976 412 aa, chain + ## HITS:1 COG:no KEGG:FN1590 NR:ns ## KEGG: FN1590 # Name: not_defined # Def: lipoprotein # Organism: F.nucleatum # Pathway: not_defined # 1 410 1 412 414 540 65.0 1e-152 MKKYVLAFIVSLSLIVFAACGKKAPEEAKDVARASKEVGANYHIGVVSGTVSQSEDGLRG AEAVVKEYGALENGGRVVHVTFPDNFMQEQETTISKIVSLADDPEMKVIVMAEAIPGTSA AFKAIKEKRPDIILLANTPHEDPELISQYADVSVHPDSVARGYLIVKAAHDLGAKKFMHI SFPRHLGYELIARRRAIFQAAAKDLGMEYIEMSAPDPVSDVGVPGAQQFILEQVPNWLDK YGKDVAFFATNDAQTEPLLKKIAEIGGYFIEADLPSPTMGYPGALGVQFAEDEKGDWPKI LAKVEEAVKNAGGSGRMGTWAYSYNFASVQALTDFAMKHLDNGTDLKDFSALLESYQKYT PGAGWNGSNYVDANGVEKDNFFMLYQDTYVFGKGYLHMTDEKVPEKYFEIKK >gi|224531371|gb|GG658181.1| GENE 109 113718 - 115316 201 532 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 290 519 26 236 318 82 27 2e-14 MNDILLKAENLSKSFGENVVLKDINFTIKPGEIVGLVGENGAGKSTLMKIIFGMEVIQAT GGYGGRLEFEGKEVRFSSPFEALEAGIGMVHQEFSLIPGFEAAENIVLNRESTKKGISEY LFGNRIRKMNEVENLERAKNAIEQLGVEQLQAEAQISEMPVAHKQFTEIAREIEREKTKL LVLDEPTAVLTEEEAKVLISTMKKLSEKGIAIIFITHRLQEILDVSDKVIVLRDGVLINT VETKDTNVNQITEWMIGRKISSSEEIIHEMNEKLENILEMKDLWVDMPGEMVKKLSLNIK KGEILGLGGMAGQGKIGIANGVMGLYDAGGEILYKGETLSLNAPKEALSKGIFFVSEDRK GVGLLLEESIEKNIAYPAIQIKQQFLKKKFGLFQLLDEKAVTENAKKYIEKLEIRCTSSK QFVKELSGGNQQKVCLAKAFTMNPELLFVSEPTRGIDIGAKQLVLETLKEYNQEKGTTII ITSSEIEELRSICDRIAVINEGKVAGILSPKADILEFGKLMVGAKEGGEEQC >gi|224531371|gb|GG658181.1| GENE 110 115310 - 116350 1561 346 aa, chain + ## HITS:1 COG:FN1897 KEGG:ns NR:ns ## COG: FN1897 COG1172 # Protein_GI_number: 19705202 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Fusobacterium nucleatum # 7 343 1 337 339 447 75.0 1e-125 MLNWKKMLENIGWPRLIIGLFLLSTYCVAPFVGIPLFVAFRDTFTRFGMNAILVLSLMPM IEAGAGLNFGMPLGVEAGLLGALISIQLGLKGGIGFFAAILFAIPFAILFGWFYGLILNR VKGGEMMIATYIGFSMVSFMCMMFLLLPFTRPDMIWAYGGEGLRTTISVERYWQKILDDL IGIHWELLPVGEILLFAVVAFGMWIFFRTRTGLSMSAVGKNPKFAQATGVSINRVRIQSV IISTVLAALGIIIYQQSFGFIQLYLAPFNMAFPAIAAILIGGASVNKVTVWHVLIGTFLF QGILTMTPTVVNAVIQTDMSETIRIIVSNGMILYALTRKGGGSHAK >gi|224531371|gb|GG658181.1| GENE 111 116340 - 117431 1432 363 aa, chain + ## HITS:1 COG:FN1896 KEGG:ns NR:ns ## COG: FN1896 COG1172 # Protein_GI_number: 19705201 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Fusobacterium nucleatum # 21 344 1 324 340 446 74.0 1e-125 MQNKWKKQLINNSVPILMFALVVFAFPLSGLSLSYIANEMLLRMSRNLFLVLSLLIPIIA GMGLNFGIVLGAMGGQLALIFVSDWHIVGVQGVLLAMILSIPFSMVLGYIGGAVLNRAKG REMITSMILGYFINGVYQLIVLYAMGVVIPLTDSKILLSSGRGVRNTIDLGKLNAALDKF VSFKIMNIEIPVLTILFIVALCIFIVWFRSTKLGQDMRAIGQDMEVARSSGIEVDKTRII AIVISTVLAGIGQVIYLQNIGTMNTYNSHEQIGMFSIAALLIGGASVAKASIPNALGGVV LFHLMFVLAPRAGKELMGSAQIGEYFRVFVSYGIIALVLIMYEWRAQKEKEAERERLIQE QLK >gi|224531371|gb|GG658181.1| GENE 112 117441 - 117758 478 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466723|ref|ZP_05631034.1| ## NR: gi|257466723|ref|ZP_05631034.1| hypothetical protein FgonA2_04731 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 105 1 105 105 191 100.0 2e-47 MVSRNIIRNWGILVILFLGIIYSLMVTGKEHSIILDNRNGLSGLRYSIDGENYQAMGTKK IQRYVQGKAHTIYIKKSNGQVTEKDFQLGFQENDLELDIKEIVKS >gi|224531371|gb|GG658181.1| GENE 113 117844 - 118551 850 235 aa, chain + ## HITS:1 COG:FN1894 KEGG:ns NR:ns ## COG: FN1894 COG2992 # Protein_GI_number: 19705199 # Func_class: R General function prediction only # Function: Uncharacterized FlgJ-related protein # Organism: Fusobacterium nucleatum # 31 232 2 203 203 173 49.0 3e-43 MKKFVILLIISIFSFAFICQDAMASTNAVSITQAKDFSKIAKNRKQVFIDTLVPIINEIK GNIKTDKEKVEEILKKEEAMRTNSEKALLEENYTKYKVNSRTPQELLKKMVLPPTSLIIA QASVESGWGGSKLAQLGNNLFGMTSISKSSADSVKIGNMRYKKYAGIQESVEDYILTISR HNAYKSLRGGIRRGEDSVGLVKHLGSYSELGSKYSSYVAKVIQSNSLQKHDNRDL >gi|224531371|gb|GG658181.1| GENE 114 118692 - 120311 1247 539 aa, chain + ## HITS:1 COG:FN0292 KEGG:ns NR:ns ## COG: FN0292 COG2831 # Protein_GI_number: 19703637 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Hemolysin activation/secretion protein # Organism: Fusobacterium nucleatum # 208 539 21 350 350 310 46.0 6e-84 MKRFVLLFILFASFAYGEILEQENRRILLEKREQLEKIFEPMTRERKVETEWESFLLKIP IQEITVEGNTLLPSFRIRRWKAANCPLRSEKELKEAMQTLENLYMEQGYVTTRVSLDLEK SDFEKGKVTFFVQEGKVEKILYDGKEKPAKTLWTFPWRQNHFLNIRDLDQGMDNLGEDAS FRILPGEEEGKSILEVKRKRTVNIFGEVNYNNMGQKTTGKHRIRTSVGFKNILGLNETLS GYYQTKLQRQKKEEDNKNYQISLLLPFQYYQFSYQLESSSYLQTIPALGRKYSATGDTKV QRFGLRRTMHRNEHGKWDFSVQLALKEIKNYMDDIKLITGSRRLSIFSLENSYIGRLGGG LFQGNIGVHFGLRQFGATKDRELWYHTQSSPKAQFRKYTLDMSWYRPFASWHYRGNLALQ YSNDILHSSERLSLGDETTVRGFQDFGVQGERGFYFRNELGYDGWKMLRPFIAYDIGEVR RVWKEEGSTSREMLQGISAGLLFSLGNWESRLVFSKAIDFPSSLHIRSHETYISVSYRF >gi|224531371|gb|GG658181.1| GENE 115 120321 - 127796 6987 2491 aa, chain + ## HITS:1 COG:FN0291 KEGG:ns NR:ns ## COG: FN0291 COG3210 # Protein_GI_number: 19703636 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Fusobacterium nucleatum # 291 1558 630 1877 1881 473 32.0 1e-132 MKKRMGILYTIFMGLSLYAANVEVDKQASPNLRMDKAPNGIPLVNIEAPNEKGWSHNVFR EYHVGKEGIIYNNGLYFSDSQLGGVIYGNPNLQAGQKTAGTILTEISGSGRSKLEGFTEI AGDKANYILANPNGIYINGAGFLNTPQVTLTTGKANTETVSGGKIEIDGKGVDLRNVNRS AFITRVAELSGPVYGGKEVIFQLGKGVAEGEEKPEFSFDARALGSLYAGRIEIISNEKGV GVKSLAPLRATAADLHMSVQGKAELKTAEAKTKIQLEAEAAKIQEKLLAEKSIQMKLQTL ENRGEIAANETVQISGDVQNHHRISANKNILLQGKTLVNEGELLSNQEMTIEMEQFENKK KAESKEMKITAREVKNTGNIAANFMNVTIEKLKNEGDFIAYQDGKAKISQWENTKRFQTG ELDSDVLKNYGKILTRRDFGVRHFENQGQVSSLGNISIQSAKNGTEGRIQSQREIKIASS LENEGKIQGKTIEIHHAKNRGEIGAIENLKAYELENHGILEARNIQIRNQGKLFNGGYLQ STESGSLEIHAKELENAKEIHSDNVLHIKTEVLKNQGNILSKNLLDVETAHLENANILYG GKQVGIQTGVFQNTGKIYSNHTMKLKATEVDLDENILAKDLLQVETDRLKLDKGYITESD LELRIKGDYKNSKELVAKNLSLQAENIHNESLLGSKGRLTLKSKKLFNRENALLFSREDS VLHGETLENHGEIYSGKNLHMEYTDSIRNLTARMEAEGDIGIKTKLFENKGHLTGDYSKK WVKGSHSSLDVQKLPKSFLKRVDEELQEEYDGSGRRHKRWEGEKYLSRAEEGESHYISHK SFVRAGKNLDIIADRVLNQEADIVVNQDFHVKAKEFINTREKKEIKIRLQFAREYSYKKR LRRRHKRTHSTFRAVLPWKQDLYSDKSTRVLVGGKLSIEAKKVGNGEYTQGTESIFKQSP SSFQIINNVQSPIFETKKTSEINPLPYLTLPTGENGQFRMSSPDSNPKFSYLIETNSRFT DKGMYLGSDYFFSRISFNPDRNIRLLGDSYYETKLINQAVLEGTGKRYLYSSDHNVERKM LFDAGIKAQKDLQLSLGIALTKEQLERLTSDILWYVEEEVHGEKVLVPKLYLSSKTVAAI SEQKGNILSSGNDLEIQAMEVANTGKIEGEKKVLISAQDFSQEALYETTGVKGERVKVST TKDLQNLGGEFLAKEEMILESKGKLQNEKKISIHKNDYHDVFSTSAGSGKIQGKSVSVSG KRVENKGAEIQAKEKVFIFGEKGISLDTVETLSGKVSGSPNNYVKTEQRRNLGSEVHGER VELLSGKDILVKGSKLSAEKELDLAAKENIEVVAAQDSDLYERHKEKSKSFGRGSSETEI HYTTSHRASQLQGENVELHAGKDIAVLGSHIQAGVEGKAVLEAEGKITQAGVKDTEYSFY EKTKTGFLGITKKTKSQESYQEEAVKSATVAGEQGAYYDAKHDLVLEGVNVVSTGKVTLQ GKNISLKPLETTSWTEVKEKKRGFAGSIGNGGVSVSYGTDKKSQKDTQKTQNISEITSGK TLTISAEETLTGSSVNLYGREGIRVTGEEGIHLSTAKNTREVQQKQSSTRVGANIGVKSE LLNTVENIKNLDKLVDSSGDGYAVLNTASNLVGAIKDGSAALNHITKESYGKKTNAKGKQ DLANDNYRVLSTNWKDYLSAGVSLTKKKAESRNYQEEVVQNQMESEGNIVLSSKQGSISL EGTEIKTPKDVKLLAKEKVEVRAAEQKNAFSSSSSQRGAGLDMNGSLTASASGQKGRGEG TSYVNSHIQAGGDYQVLAKEILHEGANVKAGTIHMKGEKILVVSKQDTSHQKDSSYGGSL SFSVNPKVTLNSVQLSARKGKGKGAWVSEQTSLLAEHGGEIVAEHLENRGAIFASESETN QLKIRAHHLEVHDLEDSHHYENRGGGVSLSSKVPNISVSHDKIEKEQKTRATAVNTEFVI AGEEKKAEELGFNTELSKAQEISKEKEKHLNAQLHTDLLGKDKQEELQRAGKVLQDVQRA AINEENTKGDFLERYRRERIMRGISEVVAKNPEWLSVLDMTAENSGKSEAELERAKAAVM NQAMNQFAISRGYPVKYDQEGNAILPITTIVTKISDPNTPMYMSATGDQFVIDEDYVLSM TKEQALNGIGHEYGHYSKVDDIATRDQTVANHTGKRVEELTKNLSSKPVSEATWKNLVNT SSVITGPGADVIANRIPVDEREYVNWHRLGEGVIETGISGVRIVQGAGEVTVGAGILSTG VGFVPGGLLAGHGSSEVVFGVNDGVAGLHKIWLAILEKDDVAEKNYLREKFGEGYSLFNY MSAASTSQTQTIKHAYGNTEKLSSSPYKESEKGKVLGDKPAKGYEYVRKGVIRGPKGGEY IEVGKTAQGSIVYKGSSGYRIFEGGRLKAISSGEIVERVSGKEVFYGGRKGNLKTRAQNE KIADYLKKEDWEITGGGNKTSEEYMEPLITS >gi|224531371|gb|GG658181.1| GENE 116 129540 - 130247 500 235 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466727|ref|ZP_05631038.1| ## NR: gi|257466727|ref|ZP_05631038.1| hypothetical protein FgonA2_04755 [Fusobacterium gonidiaformans ATCC 25563] # 1 235 21 255 255 418 99.0 1e-115 MITGPGADVIANRIPVDEREYKGFGFSYSGEITTPAGGVIAGSNVVLTIDDDTKEAYISG VISIGAGVSLKTSIGKNITWIYFPNVNNPEDLTGASIGGVLDFGVVSIGGNLDLINRKLD SIEVSPNISNWKETFKKINIQGNISFGKKIEAIKVSSKEIESILKIQEKQKEVERQLKFE ENPSQRIKLITEKNRLKIEEQEEAKKIIYKYGTFKEKIFNDKLLKHRNETIFWEE >gi|224531371|gb|GG658181.1| GENE 117 130250 - 130759 260 169 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466728|ref|ZP_05631039.1| ## NR: gi|257466728|ref|ZP_05631039.1| hypothetical protein FgonA2_04760 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 169 1 169 169 260 100.0 2e-68 MLSFTEKNKKIVMVENNKDSVLFLLFIPFSSFIFYTLFCLIKFDNPFIGKWFIMIVMLYI SFLLLKFPWKRKLYINQHQIKIVQYPLKKIEIIELYYKKEIKIVTNVLEKEKIPILGRET IEIFSEENQGRIYTMQILLEKKEYSICSSLYYEELYEIKEKLLMYWEEA >gi|224531371|gb|GG658181.1| GENE 118 130759 - 131280 157 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466729|ref|ZP_05631040.1| ## NR: gi|257466729|ref|ZP_05631040.1| hypothetical protein FgonA2_04765 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 173 1 173 173 261 100.0 1e-68 MKIQEQMYEFMYRKDKLQNKLLFFCIIFYIIYLQIAKTKYAVLPFEIISKYSFPFFLLYI FSCILLTSKEKVMISRESIRIQKYFLIFCYYDKHIEMRKIRKILFRKFLTKEHIFVCPLF DNAYSNLIFQVDMNGEEDKAYYFGKFLDRQKFLEIMQSIKTVVEGTQILFLYY >gi|224531371|gb|GG658181.1| GENE 119 131371 - 132369 1128 332 aa, chain + ## HITS:1 COG:FN0290 KEGG:ns NR:ns ## COG: FN0290 COG3210 # Protein_GI_number: 19703635 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Fusobacterium nucleatum # 3 84 465 545 727 73 47.0 7e-13 MTKEQALNGIGHEYGHYSKADDIATRDQTVANHTGKRVEELTKNLSSKPVSEATWKNLVN TSSVITGPGRDVIANRIPVGEREYVNWHRFGEGVIETGISGVRITQGASEVTVGAEILST GIGFVPGGLLAGHGSSEVVFGVNDGVAGLHKIWLAILEKDDVAEKNYLREKFGEGYSLFN YMSAASTSQTQTIKHAYGNTEKLSSSPREEPEKGKALGYKPAKGYEYVRKGVIRGPKGGE YTEVGKTAQGSIVYKGSGGYRIFEGGRLKAISSGEIVERVPGKEVFYGGRKGNLGTRTQN GGIADYLKKEDWKITGGGNKTKEEYMKPLVAS >gi|224531371|gb|GG658181.1| GENE 120 133161 - 133763 507 200 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466731|ref|ZP_05631042.1| ## NR: gi|257466731|ref|ZP_05631042.1| hypothetical protein FgonA2_04775 [Fusobacterium gonidiaformans ATCC 25563] # 1 200 26 225 225 347 99.0 2e-94 MTGPGADVIANRIPVGEREYVTKEVFFSTSVAPRISKGVRGSYTMSSFTSYDKKKDEVSE YKMSTYTVGAGTHDLGISVGLGYYFVDTYEQMQNINKSFGGSITFLGKTVGLDFMASSDS SSFYLSDFFNIRRVRMYIGQSFVPAKKEIHGGFIDKATTGVLKKYNTMDFYEKESLPSNI RQYYQNYYKEGSSQKSFGRK >gi|224531371|gb|GG658181.1| GENE 121 133920 - 134237 129 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466732|ref|ZP_05631043.1| ## NR: gi|257466732|ref|ZP_05631043.1| hypothetical protein FgonA2_04780 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 105 52 156 156 157 100.0 2e-37 MIIFYFYGNRQVYKNLCLEIMEIDLKFKKLRLSTLTEKVEFYFHEILNISINKTEENFEE ISYFTLEIELEKNKHNWGNQLKKNELERIKRTLEEVLNEYISNSI >gi|224531371|gb|GG658181.1| GENE 122 134212 - 134574 189 120 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466733|ref|ZP_05631044.1| ## NR: gi|257466733|ref|ZP_05631044.1| hypothetical protein FgonA2_04785 [Fusobacterium gonidiaformans ATCC 25563] # 1 120 1 120 120 159 100.0 7e-38 MNILAIQSKIIETIYSNKNLILLFYISISLCQVIYLRYYFTKNNLFLFIANKGFSIFFVM IEFISNKNPDGLGKYMLLHLFLYFIISVKERRKIVLRIERFLSEDILIIGVVILLISYIK >gi|224531371|gb|GG658181.1| GENE 123 134720 - 135007 334 95 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466734|ref|ZP_05631045.1| ## NR: gi|257466734|ref|ZP_05631045.1| hypothetical protein FgonA2_04790 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 95 1 95 95 165 100.0 1e-39 MANSSKDIEGKSSNVSVGIGKTGANITELTKWNKGTGGFISYGLSWPLYIDASLNNVNTE IIFSTKDQNFIIPLTKEMNNYIITPWYSGFYDMSK >gi|224531371|gb|GG658181.1| GENE 124 135027 - 135653 318 208 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466735|ref|ZP_05631046.1| ## NR: gi|257466735|ref|ZP_05631046.1| hypothetical protein FgonA2_04795 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 208 1 208 208 278 100.0 2e-73 MIFKKMSEAFRILIERKVEIDIIETENTLKYHKKSEELQEAYFFLKKIIYFLILTIMIIF IILKEYIHFNFFQSFLLFFPIIFFLFLSDKFSIYKYCSEILIFSNSITLRYQIRNKILYE RELRFCDFMEIKVQIPEKNLIHSFFSEIKKVLEEDRILKIIGKEETFSWGYKISEKEAIE VKKRIEKKLPDLIEKSKKNQPPKWHSWQ >gi|224531371|gb|GG658181.1| GENE 125 135742 - 136857 1030 371 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466736|ref|ZP_05631047.1| ## NR: gi|257466736|ref|ZP_05631047.1| hypothetical protein FgonA2_04800 [Fusobacterium gonidiaformans ATCC 25563] # 1 369 1 369 369 639 100.0 0 MKVEATSACSKGSILLEEIDVKIQKDIGILAKEILQKQQEAKKLSATDSRYDYFVSVSEQ KGIVIGKVEKGKSWGSHLKESVGDTFFYTKESFKNLPAWIRAQSEFADNPNQEHDKISRR QWKELSKNLGGMLNSGSDAMALGVGRISGETVLTIKPGAVLYGSVSEITQRYEDLKEEVR NSANLVTSIGLAKGMEVVGNTKTVQKIKQGVSNTVGKILPSNSAKSQLQSLGIKVEEKRI GLQVDGTTIRGLEIDDALGNNLGRTFKTFDNFDETTKTATSVKSIDMDSKTYLSGSRLSS KLNKDLKAIENFTEYELKGIHLSKDKIDKSVLKIVINNKPLNTSQMENLKKVVTHAAEEG IRVEAVILKSS >gi|224531371|gb|GG658181.1| GENE 126 138419 - 138895 450 158 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466737|ref|ZP_05631048.1| ## NR: gi|257466737|ref|ZP_05631048.1| hypothetical protein FgonA2_04805 [Fusobacterium gonidiaformans ATCC 25563] # 1 158 4 161 161 281 100.0 1e-74 MNLLVAIYKEKKKKDFRMVILPSGESKIGLTQYKDYGIISYLNKKDSEKIGEFIFWALSE SDTKKIEEDVNVPWHKKYFNCSSNLKMVNDYNNIGLRFFENKYKLYLKMKDGRGYSPFKD ENGNIVEYVFSEKPTALELGTKVMEMFEYKERYDGIIE >gi|224531371|gb|GG658181.1| GENE 127 139004 - 139168 138 54 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466726|ref|ZP_05631037.1| ## NR: gi|257466726|ref|ZP_05631037.1| hemolysin [Fusobacterium gonidiaformans ATCC 25563] hemolysin [Fusobacterium gonidiaformans ATCC 25563] hemolysin [Fusobacterium gonidiaformans ATCC 25563] # 1 47 2067 2113 2489 85 93.0 1e-15 MVAKNPEWLSVLDMTVENSGKSEAELERAKVAVMNQAMNQFAISRGYQRRTVEK >gi|224531371|gb|GG658181.1| GENE 128 139165 - 139707 563 180 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466739|ref|ZP_05631050.1| ## NR: gi|257466739|ref|ZP_05631050.1| hypothetical protein FgonA2_04815 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 180 1 180 180 295 100.0 8e-79 MKKIVYIRGKWKGSYQEMKVAYLYAKEMMTRYGLEPQYIGVIAEKGWKGEKILTIKRKEK QLLQDIEEKKNILAIELYTKEIIEKQIRGDKSYFSIDKEEGVVAFWSNTNIEKINFEEIL EEMKEYVEAGIEEICDWESDALPLRYIWEGEKTINSDNIIPKKITVIYKKVTPLDIPIEV >gi|224531371|gb|GG658181.1| GENE 129 140337 - 140507 412 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452895|ref|ZP_05618194.1| ## NR: gi|257452895|ref|ZP_05618194.1| hypothetical protein F3_07499 [Fusobacterium sp. 3_1_5R] hypothetical protein FuD12_01890 [Fusobacterium sp. D12] hypothetical protein FgonA2_04820 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. D12] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. D12] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 56 1 56 56 68 100.0 2e-10 MHVIDKETCIGCGACEGVCPVSTISATDDGKYEVGDACVDCGACAAGCPVSAISAQ >gi|224531371|gb|GG658181.1| GENE 130 140622 - 141566 483 314 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 3 306 38 342 353 190 33 5e-47 MKKIFIAPIAGVTDYTYRGILEEFHPDLLFTEMVSSDALAALNDKTISQILRLRPGNGVQ LFGKDVEKMLYSAKYVEKLGVKHIDINSGCPMKRVVHSGHGAALLKSPDKIKEILSTLRE GLQEDTDLSIKIRIGYEKPENYIQIAKIAEEVGCSHITVHGRTRAQLYTGFADWSLIKEI KENVSIPVIGNGDIFTAEDAKEKIEYSGVDGVMLARGIFGNPWLIREIREILQYGQVKTK VTAEDKIDMAIHHIEEIAKDNPQREFVFDVRKHICWYLKGISNSAECKNQINRSVDYQAM VALLQELKEKIKGE >gi|224531371|gb|GG658181.1| GENE 131 141569 - 144169 2992 866 aa, chain + ## HITS:1 COG:FN0693 KEGG:ns NR:ns ## COG: FN0693 COG0249 # Protein_GI_number: 19704028 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Fusobacterium nucleatum # 1 857 20 893 896 926 59.0 0 MASETPLMAQYKEIKEEYQNAILLFRLGDFYEMFFEDAKIASKELGLTLTSRNREKGQDV PLAGVPYHSVASYVAKLLEKGYTVAICDQVEDPKAAKGIVKREVTRVLTPGTQIDVDYLD GKSNQYLMSFVCKEEGAAIAYFDITTGEFRVRELKEGNLFYQLLGELGKINPKELILEEE IYRNYQDDFEKYPDFSGIKINFCKNVKQAESYLKECYQIMSLESFGLAQKPLAQQVCANI LDYVKTLQKGQEFPLMKISLLSNQETMELNRSGQKNLEIFGALFSILDLCKTSMGSRYLK RVLQNPLLNIAKIKKRQDYVEFFTKEVLLREEVRELLSEVYDLERILGKIQLSTVNGRDI LALGKSLKAALLLEKQLHRYSMLKMEREVFSEMQENIMNAIMIEAPFSIREGGIFQKGYH QELDELRHITSSGKEILLDIEAREREKTGIKTLKIKYNKVFGYFIEVSKANEHLVPSHYI RKQTLVNSERYIVEELKEYEDRILNAKTKIESLEYYLFQEFVEKIKEQKEALSDLARQLS FLDVMTSFAQLAIQKSYVRPEVVEEDILEIRGGRHPIVENLIPKGTYVKNDLYFDKSERM MVLTGPNMSGKSTYMKQIALIIILAQVGSFVPADFAKIGIVDKIFTRIGASDDLLTGQST FMVEMSEVANIIHNATEKSFIILDEIGRGTSTFDGISIATAITEHIHSHIRAKTIFATHY HELTELEKELELVKNYRIEVQEQGKEVLFLREIVQGGADKSYGIEVAKLSGLPQNILKRS KQILSRLEKQKALVEKKMQGEQMVLFQAEEIEEEEETERNMEEQSVLEEIRKLSIDQMTP LQALLVLQSLKGKLSGGKHDEKSLDL >gi|224531371|gb|GG658181.1| GENE 132 144144 - 146537 2999 797 aa, chain + ## HITS:1 COG:no KEGG:FN0694 NR:ns ## KEGG: FN0694 # Name: not_defined # Def: S-layer protein # Organism: F.nucleatum # Pathway: not_defined # 244 742 7 505 643 202 28.0 6e-50 MTKKAWIYSGVGAVVLVAGYFNYFGEDKKLDTLKKVIETSNAIYKSADYFVEAKKQIDYV DDKETKFEIAKAVVKGMALSGDNVVIDKLRNLVLKNNILGVSENGWKFNTSELRYNKSTD EIISEAGVSAINEKKGIHLEGKKFLTTTSMSHILLENGVKFEVGQAGLRGEKAEYDDSTK KILLSGNIELYNPQKDGKEFRGKFGNMIYDVEKGRGETNLPFEIIYKETILNAEKMDFHP EENAFHLEQNVKITSKEYNANLLAIDKKAGEDFITFVGPIRGQNEEYTYSMNRAVYDTVK KEITMTGNIDILSGKGERIRADRAIYHEKEKLLDVYSDGNKVTYDGSGHHIEATSFQYDA KTGDVHVHSPYRYTNQNGDVFEGSNLEYNKATGKAIVKGEVKYQSKDYTVKTVDLDYARE TGVLTIANPYSITMKDGTNFEGKSAVYNEKTGNLVSPGSIYMVGKDYVAHGHDLKYNNNT GAGTLEGPVNLVSETQNFNITGDRAVFDKKNGAVMGNVKGNLQGTMIATSKAIYKSNQKM VELPAPIQYRNPQENLHGTMQNGEYFVEEHRFQGKQFVAIRPGEKVSSEYAEYFTEEKRA ELIGKVRMENADQVVSTEKASYELIDKYAELPETFKMTKGQFVVNGASGNVNFTTQKLFV KKPKMNSQAGEHFEAERLEGNLKTLIMDFRDKVYGKTMQKNVLSEYRGEKARVYLKKEQN QYRAKKLEVFEDAVFSQEDKKLRGKRGQYDFDTSLVNFYGDVSFTSKDGNIRSDEMIYNT ETKKAKAKGNVELHYNK >gi|224531371|gb|GG658181.1| GENE 133 146553 - 147278 260 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 8 226 6 229 245 104 25 3e-21 MINLTARNLVKAYKQRKVVDSVSLEVNKGEIVGLLGPNGAGKTTTFYMITGIIKPNAGSV ICNGEEITSYPMYKRANLGIGYLAQEPSVFRNLTVEDNIRAVLEMKHYGKKEQKEIVDKL LEEFKLTHVYESLGYSLSGGERRRVEIARTIANNPSFILLDEPFAGVDPIAVEDIQQSIR YLQKRGLGILITDHSVRETLNITEKAYIMAQGKVIISGSPQEIAENEMARKIYLGENFKL D >gi|224531371|gb|GG658181.1| GENE 134 147298 - 149898 3732 866 aa, chain + ## HITS:1 COG:FN0697 KEGG:ns NR:ns ## COG: FN0697 COG0013 # Protein_GI_number: 19704032 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 863 1 863 867 1269 75.0 0 MLTGNEIRQKFIEFFESKAHKHFESASLIPDDPTLLLTVAGMVPFKPYFLGQKEAPCPRV TTYQKCIRTNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIVWSWEFVTEVLGLPKDKL WVTVFTTDDEAEKIWIEDCHFPRERIVRMGESENWWAAGPTGSCGPCSEIHVDLGPEYGG DENSKIGDEGTDNRYIEIWNLVFTEWNRMEDGHLEPLPKKNIDTGAGLERIAAMVQGKSN NFETDLLFPLVEEAGRLTNSKYHESPEKDFSLKVITDHSRAVTFLIHDGVIPSNEGRGYV LRRILRRAVRHGRLLGQKELFLYKMVKKVVDQFAIAYPDLTANLENIQKIVKIEEEKFSN TLDQGIQLVNEQIEMALQAGKSSLDGEITFKMYDTYGFPYELTEEICNERGIAVSQEEFL AKMEEQKEKARSARAVIMEKGQDSFIEEFYDKHGVTEFTGYHSTEEKAKLLNIRQKEDGT LLLIFDKTPFYGESGGQVGDHGSISSEAFQGKVLDVKKQKEIFTHIVEVVSGEAEEGKEY TLTVDSKYRAAVSKNHTATHLLHKALREVLGTHVQQAGSLVDSEKLRFDFSHYEAMTEEQ IQEVEERVNEKISEAIAVEVSHKTMEEAKVCGAMMLFGDKYGDVVRVVHVPGFSTELCGG IHVENIGHIGLFKIVSEGGIAAGVRRIEAKTGYEAYRFVEENIGMLKKTAKLLKTEDSLL LEKVEKVLQEEKEKAREITSLKEKIAKQEAEALYTHALEIADVKVFMAKYEDKSMDDLRK MIDFVKDKEENAIVVLTSTFEKLSFAVGVSKALTGKYKAGNLVKIAAEITGGKGGGKPDF AQAGGKDKSKIEEAMEAIKKAIEENK >gi|224531371|gb|GG658181.1| GENE 135 149910 - 150329 626 139 aa, chain + ## HITS:1 COG:FN0698 KEGG:ns NR:ns ## COG: FN0698 COG0816 # Protein_GI_number: 19704033 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Fusobacterium nucleatum # 2 139 1 138 138 166 71.0 1e-41 MLKKYLALDVGDVRIGVAKSDIMGIIASPLETIDRRKMKPVKRIIELCEQENTKSIVVGI PKSLDGSEKRQAEKVRIFIHALKSAIPGVEIFEVDERFTTVTADQILTEMNRKGALEKRK VVDKVAASLILQQYLNMKK >gi|224531371|gb|GG658181.1| GENE 136 150343 - 151578 1819 411 aa, chain + ## HITS:1 COG:FN0699 KEGG:ns NR:ns ## COG: FN0699 COG0342 # Protein_GI_number: 19704034 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Fusobacterium nucleatum # 1 411 1 411 411 557 75.0 1e-158 MKSKLMLKLLLVLGILAGAMWLSFSKPTKLGLDLKGGVYVVLEAVPEEGQTLDKDAMGRL IEVLDRRINGLGVAESSVQMAGDNRVIIELPGVDNTEDAVKMVGKTALLEFKLKQEDGSL GETLLTGGSLKKADVSYDNLGRPQIQFEMTPEGAREFAKITRENIGKQLAITLDGEVQTA PVINGEIPSGSGVITGNYTVEEAKATATLLNAGALPVKAEIAEIRTVGASLGDESIAQSK QAGMLAIVLIWAFMILFYRLPGIVADIALVFFGFITFGLLNFIDATLTLPGIAGLILSAG MAVDANVIIFERIKEELQFGNTIRNAIASGFNKGFVAIFDSNITTLIITIILFTFGTGPV KGFAVTLTIGTIGSMLTAITITKVLLLNFVEIFGFTKPSLFGIKGKKEEAK >gi|224531371|gb|GG658181.1| GENE 137 151580 - 152521 1555 313 aa, chain + ## HITS:1 COG:FN0700 KEGG:ns NR:ns ## COG: FN0700 COG0341 # Protein_GI_number: 19704035 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Fusobacterium nucleatum # 3 313 5 317 317 355 61.0 6e-98 MQVNVIKNSKQYLGLALTMVILSLGVFFTKGLNYGIDFSGGNLLQIKYENKITLHDINES LDNIQGIPQIGTNSRKVQISEDNTVIIRTQEISEDEKKEILNALQSVGAYQIDKEDKVGA SVGEELKTSAIYALGIGAVLIIIYITFRFEFIFAVGAIVALLHDLILALGCISLLYYEIN TPFIAAILTILGYSINDTIVVFDRIRENLKRRAKTQMSIEECLAKSVNQVMIRSINTSVT TLFAIVAILLLGGDSLRTFIVTLLVGILAGTYSSVFIATPVVYFLHKKGDGKGMEKISVE KDEDQEDEEKILV >gi|224531371|gb|GG658181.1| GENE 138 152584 - 153648 1335 354 aa, chain + ## HITS:1 COG:FN0406 KEGG:ns NR:ns ## COG: FN0406 COG0787 # Protein_GI_number: 19703748 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Fusobacterium nucleatum # 1 352 1 352 354 332 46.0 5e-91 MRAWVEIDTENLRHNIREIQKRAEGFGVWGVIKANAYGLGVLPVAKILAEEGIHYFAVAS LEEAKEVRNANITGEILILGSLFHDEILEAESLDFHINVSCREELEWIAKNAPKTKIHLK IDTGMTRLGFSYQEGMEVIEFAKKLSLNITGVFSHFSDADGNSQEAKEYTQKQIERFLPY ATREDIPYRHIFNSGALIQYTDQKIGNMVRAGICLYGILGSTPIPSFKNVVTLKTKVLFK KTVTEETYVSYGRLCKLEKGETYVTLPIGYADGVKKYLANGGKVEILGEACPIIGAICMD MMMVKIPENLVNKIEIGTEVSVFNNDIIRRNNISETCTWDMFTGLGRRVQRIYK >gi|224531371|gb|GG658181.1| GENE 139 153663 - 154844 606 393 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 1 390 1 392 396 238 33 3e-61 MAKIVLQRGKEKKIQNFYPNVFQDEIKEKIGTMKTGDLVDIVTEEMEFVARAYVTEGSSA YARVLSTKDEKIDKTFFQKRIKNAYDRRKHLLKETNCIRAFFSEGDGIPGLIIDKFEHYV AVQFRNSGLEVFRQEILNAIKKYLKPKGIYERSDVENRTHEGVEQKTGILFGEIPERIVM EDNGAKYHIDIIHGQKTGFFLDQRDSRKFIQKYIHEKTRFLDVFSSSGGFSMAALRDGAR EVIAIDKDAHALELCRENYELNHFQSNFSTMEGDAFLLLETLGGRKEKFDIITLDPPSLI KRKAEIYRGRDFFFDLCEKSFPLLEENGILGVMTCAYHISLQDLIEVTRMAASKHGKKVR VLGVNYQPEDHPWILHIPETLYLKALWVQVVED >gi|224531371|gb|GG658181.1| GENE 140 154856 - 155407 711 183 aa, chain + ## HITS:1 COG:no KEGG:FN1032 NR:ns ## KEGG: FN1032 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 171 1 173 179 103 39.0 3e-21 MYLDIIVCVILLLAILTGASNGMYVEFISIFGLFLNIMLTKTYTPTVISFFKIKYINNNY ALTYIVVFISLYLFIKIVLCITNRVLRDESKGIITKGIGAFIGLAKGTVIAFIFLLIYNF SMDLFPSIRVYSVGSKTNLIFADAVPEMEKFIPDIFVEKLNRIRNFNFIEKALRNQRNTY ENN >gi|224531371|gb|GG658181.1| GENE 141 155394 - 156470 1049 358 aa, chain + ## HITS:1 COG:FN1031 KEGG:ns NR:ns ## COG: FN1031 COG0795 # Protein_GI_number: 19704366 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Fusobacterium nucleatum # 1 358 1 359 359 374 57.0 1e-103 MKIIDSYILKECRGPIILSVSIFTFIFLLDIIVAMMENIIVKGISVFDIARILSFYVPPI LTQTIPLGLFVGIMITFSKFTRSSEAIAMNSIGMDIRAILKPILTLGIASMFFILFLQES IIPRSYIKLQYLASKIAYENPVFQLKERTFMNNLEGYSLYIDKVERDKHASGILIFENDE KTIFPIVLVGHQAYWRDSSIILERANFISFDEKGVRKLTGSFEDKRVELQAYFSDLQIKV KEIEMMSIGTLLREMKGKSKEEKLIYKVEINRKLALPFSSVMLSVLGVLLSIGHQRSGKR AGILVGILTIFFYICLLNVGIVLANVGKIPILLGVWLPNVLLAALTYRLYIVKKRRGI >gi|224531371|gb|GG658181.1| GENE 142 156473 - 157558 1321 361 aa, chain + ## HITS:1 COG:FN1030 KEGG:ns NR:ns ## COG: FN1030 COG0795 # Protein_GI_number: 19704365 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Fusobacterium nucleatum # 1 361 2 363 363 340 48.0 2e-93 MKKLDIYMTKNFLKYFSYSLFSFLGIFVLSQVFKVLRYVNEGQLSPGQIPLFIGNLLPGI IINVAPLAVLLGGLISINIMASNLEIISLKTSGIRFARLVRGPIFMSFLISLIVFYLNDR VYPGSVVRNRELRGKEDVEEREVPKEKENAFFRNVEGRYVYYMKKINRETGIMDHVEVLD MSENFDKIERMITAKKGRYDFKRKLWVFEDAHIYYPDTDTVEARAFIQEQKYMDEPEYFI SLSNIIPKQKTIAELKKAIKEGSATGNEIREILSELGKRYSFPFASFVVSFLGLALGSHY VRGMSILNIVISILLGYAYYLVEGAFEALGMNGYLNPFLSGWIPNLLFLAAGLYFMRRAE Y >gi|224531371|gb|GG658181.1| GENE 143 157571 - 158821 1705 416 aa, chain + ## HITS:1 COG:FN1029 KEGG:ns NR:ns ## COG: FN1029 COG0612 # Protein_GI_number: 19704364 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Fusobacterium nucleatum # 3 409 2 408 408 429 54.0 1e-120 MSEQVQVKTLSNGITVLIEKVPELQSFSLGFFVRTGARNEREEESGISHFIEHMMFKGTE TRTAKDLSEVIDNEGGIINAYTSRETTVYYVQLLSNKLEIAIDVLSDMMLHSTFTEENIE KERNVIIEEIKMYEDSPEDTVHDENISFALRGIQSNSISGTPEGLKKITREHFMNYLKDQ YVASNLLIAISGNFDETVLMTQLEEKMSAFPQSDKKREYDNRYEIYAGTQVITRDTQQVH ICFNTRGIDVHHPKKYAASILANALGGGMSARLFQRIREEKGLAYSVYSYQSVYEDCGIF TTYAGTTKEAYQEVVNMIQEEYKKVREEGITEQELQRCKNQFTSALMFHLESSKGRMSSM ASSYINNGKVEAREEIMKRINEVSLEDIKEMAQYLFDEKYYSCTVLGNIKKEEFSI >gi|224531371|gb|GG658181.1| GENE 144 158818 - 159258 821 146 aa, chain + ## HITS:1 COG:FN1028 KEGG:ns NR:ns ## COG: FN1028 COG0756 # Protein_GI_number: 19704363 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Fusobacterium nucleatum # 1 146 1 146 146 211 74.0 3e-55 MSKVQVKVVLEEGVQLPKYESAGAAGLDVRANITESISLGSLERTLIPTGIRMAIPEGYE VQVRPRSGLALKHGITLLNTPGTIDSDYRGELKIIIANMSKEPYVIEPQERIGQLVLNKV EQMEFELVSSLDETERGEGGFGHTGK >gi|224531371|gb|GG658181.1| GENE 145 159268 - 160374 1249 368 aa, chain + ## HITS:1 COG:FN1027 KEGG:ns NR:ns ## COG: FN1027 COG0772 # Protein_GI_number: 19704362 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Fusobacterium nucleatum # 11 368 7 364 366 405 61.0 1e-113 MGKNRKRYFLIKRIKKMNMWFIANIFVIFLLSLMSIYSSTIPKGPGFFKKELLWFVISAF VFIGFALLDYHKYMKYDRYVYLFNVLMLLSVFVIGTKRLGAQRWIDLGPISIQPSEFAKI FLVLTLASYMAKRSHERFEGFKAMTFSFLHMLPIFGLIALQPDLGTSLVLLIVYATLVFI NGLDWRTIFILIVAAILAVPGSYFFLLHDYQRQRVLTFLHPGEDMLGSGWNVMQSMIAIG SGGIDGKGFLQNSQSKLRFLPESHTDFIGAVYLEERGFLGGVALLFLYLFLLIQILKIAD DTEEKFGKLICYGIASIFFFHIFINLGMIMGIMPVTGLPLLLMSYGGSSLVFAYMMLGIV QSVKFHRG >gi|224531371|gb|GG658181.1| GENE 146 160377 - 161252 897 291 aa, chain + ## HITS:1 COG:FN1026 KEGG:ns NR:ns ## COG: FN1026 COG0564 # Protein_GI_number: 19704361 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Fusobacterium nucleatum # 1 285 1 288 289 218 46.0 8e-57 MKEYRVEEKYIGVRIDRYLRKEFPNLSLGDIFKTLRTGKIKVNGKKVKENYRFLEEDRIQ NYLQVEEKEKMTFIHLSQEEKKRLEDGIFYQDTDILVFYKKAGELMHKGSSHDYGLAEQF QAYFQNEDFHFVNRLDKETSGLVLGGKCLKIVRELAEAIKKRTIIKKYYIIIEGIPEKNH FSLKTYLKKGENKVLESKTAKEEYKECSASFSVIRKNKEYSLLEAVLETGRTHQLRVQLA GIGFPILGDIKYGKKRAKRMYLHSHLLKISDWEKEWDTGIPTEFLSYFNNK >gi|224531371|gb|GG658181.1| GENE 147 161263 - 162564 1942 433 aa, chain + ## HITS:1 COG:FN1025 KEGG:ns NR:ns ## COG: FN1025 COG2252 # Protein_GI_number: 19704360 # Func_class: R General function prediction only # Function: Permeases # Organism: Fusobacterium nucleatum # 6 433 8 435 435 482 65.0 1e-136 MENQGFLDRYFKLSERGTNVRNEVIGGITTFLAMAYIIFVNPSILSLTGMDKGALITVTC LATALGTFISGVWANAPFGLAPGMGLNAFFTFTLVMDKGVTWETALGIVFLSGCFFFILS LGGIRERIADCIPLSIKIAVGAGIGLFITLIGLKNMGLVVKNDATLVGLGVLGPEVLIGI AGLFIAVILEIKRVKGGILIGILSSTILAFVFHKVEMPASFISLPPSMAPIFMKLDIKSA FQISLMGPIFSFMFVDLFDSLGTLISCSKEIGLVDKDGKIKGFGKMLYTDVASTIFGAMM GTSTVTTFVESSAGIAAGARTGLASVVTSILFVLSLVFAPIVGVVPAYATAPALIIVGVY MFKNVQHLDFNDLKTLVPAFIIIIMMPLTYSISIGLSLGFISYIIIHLLTGDFKALNIPL IFVGILSLVNLIV >gi|224531371|gb|GG658181.1| GENE 148 162567 - 163478 934 303 aa, chain + ## HITS:1 COG:FN2101 KEGG:ns NR:ns ## COG: FN2101 COG0697 # Protein_GI_number: 19705391 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 11 301 7 299 301 243 49.0 3e-64 MFVGGNMNLGMGILVTFIGGVFWGFSGVAGKYLFEYTGVTSDWLVPWRLLFAGCIMLLYL YYKQGKEIFRILKEDYKDLLLYAIFGMMACQYTYFTTVQYSNAAIATVLQYSAPPLIMVY MCYKERKKPAKIEVISLIFSCIGVFVLCTHFQFETFVISPKALVWGMISALAMVVNTVQP VNLLKKYGSFLPLAWSMTIGGSILFFWTRPDKIPVEYTWNLFGGFFAVVFLGTIVAFSLY MQGIKVIGPTKASLIACVEPISATVLSIILLGTAFEFLDIVGIALILMAVCLLTYPTKNK KNS >gi|224531371|gb|GG658181.1| GENE 149 163544 - 163969 834 141 aa, chain + ## HITS:1 COG:FN0513 KEGG:ns NR:ns ## COG: FN0513 COG0716 # Protein_GI_number: 19703848 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 2 141 3 142 142 154 56.0 5e-38 MKIALVYRSTTGRTEAMAKAIEEGILAAGGAVNVSSIEDVNVDDVFASDILVLGSSADGA ESIDEANFVPFMEDNKDKFAGKKVFLFGSYGWGGGEYANTWKDQVVEFGAEMIEEPVTCL EDPEDATLDQLREVGKKIAAL >gi|224531371|gb|GG658181.1| GENE 150 164003 - 164068 58 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKKGTVTVPFLSYIYQMKKM >gi|224531371|gb|GG658181.1| GENE 151 164152 - 164799 818 215 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452874|ref|ZP_05618173.1| ## NR: gi|257452874|ref|ZP_05618173.1| hypothetical protein F3_07394 [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] # 1 200 1 200 215 295 99.0 2e-78 MKKFTTSLGIFFITSFVTLAATSLKPAEVHTKDGVFTNEKGMVLQGEYEIREGLYDSNFH FQNGKLLHFSFETRKKKENDFEVEGKFATPESFKGELSIKTEEKGKKEEILKKKLSLDGT LEGKTLYTFATEVLTKTPESLKVPTFNTVETWKLQDGKREWKEEKTVELSKKEGSMDYHM FQKTNTEEEQVFSKGKLVHTSKGSSSSSEMKSMKQ >gi|224531371|gb|GG658181.1| GENE 152 164911 - 166926 2658 671 aa, chain + ## HITS:1 COG:alr3443_2 KEGG:ns NR:ns ## COG: alr3443_2 COG0147 # Protein_GI_number: 17230935 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Nostoc sp. PCC 7120 # 205 658 35 496 514 402 46.0 1e-111 MRTLLIDNYDSYTYNLYQLLADISEDEVLVIKNDEYSWQEVQDLSFDLVVISPGPGTPTK KEDFGVCAELIRYCEKPIFAVCLGHQGLYHILGGEVGKAPVAMHGRLSKIYHKERGIFQN LKQGIEVVRYHSLLCKGIVPDCLEVEARTEEGLIMALSHKTRPIWSVQFHPESICTENGR EMLENFFRLGREFYEKEEEFIYEVIDFLGEGEEIFRKLYPKFPKVLWLDSSKVEEGLARF SIFGLSSVEKGHSLTYHVDSGVVKKSWENGKIEEFSESIFDYLQRNQKSWKLKEELPFDF QLGYIGYFGYELKKECVTGNQHSYEYPDAQFRYVDRAVVLDHLEKKLYLLSEGREKVWIE EVKEILQSAESYQEREHFSDYPRVAFVTSREQYLENIRKSQELISQGESYEICLTNRLDI FAKIHPVDYYLLLRKVSPGSYSAFLPYENISIASSSMEKFLTIDRNRIVETKPIKGTIRR GNTAEEDEKLKRSLVEEEKNKSENLMIVDLLRNDLGKVSEIASVKVPKLMAVETYTTLHQ LVSTITGKVASQYDSIDVIKASFPGGSMTGAPKKRTLEIIDHLEKVPRGVYSGSIGFLAN NGTADFNIVIRTAIIEKEKVSLGVGGAIIALSNAEEEFEEILLKAKGVLRAFQLYFKGNT EEEIEIEASIE >gi|224531371|gb|GG658181.1| GENE 153 166923 - 167615 615 230 aa, chain + ## HITS:1 COG:FN1729 KEGG:ns NR:ns ## COG: FN1729 COG0115 # Protein_GI_number: 19705050 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Fusobacterium nucleatum # 1 225 1 228 249 169 43.0 3e-42 MKIILDDAFLFGAGVFETIKVEKGRAIFCEEHLKRLHQSLEFFGISQKISEEEVQEYLDK QEEKDFALKIVVSSKNILYLKRENPYLSQNREKGLRLCFSKVLRNSTSAMVYHKTTQYYE NLLEKKKVKECGYDEVLFWNERGELTEGAVSNIFFIKGEKLYTPAVSCGLLAGIIRAKVM ERYTVEEKIIRKEDLETFDACFMTNSLMGMFWVKEIEGVFYDNNRENFML >gi|224531371|gb|GG658181.1| GENE 154 167584 - 167676 72 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MITIEKISCYKYVLNCKQIVYSFLFFVCFY >gi|224531371|gb|GG658181.1| GENE 155 167880 - 171164 3130 1094 aa, chain + ## HITS:1 COG:FN0499 KEGG:ns NR:ns ## COG: FN0499 COG1629 # Protein_GI_number: 19703834 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 9 391 2 379 743 184 32.0 6e-46 MKKGYLGFLFLISSLSSFAVEQEVKLAPTTVDGRSSYNGSVTENEIKNIVVITKEEIQKK QHKDLLSVFEDSPMTMVTHTQAGPLIALRGSGEKTVMRVKVLLDGTSINTVDDSMGVIPF NAIPVSSVEKIEIIPGGGITLYGSGSSSGVINIITKSGKMKDYGVVNVTSSSFNTYNVNM SKGLKLGKNIFANVAVEAEKGKGCRQKEEHKKYNVLGGFHFRLNDKNSIRIYGSQYKNDE DNTNELSIYDLKRNRRKAGDTLSKVKSDRHTFGVDYQYNPSEKLHFTANYNSSKFSRDIT QDARPSLTFLPSIDFFDNAFADSDSRIDLVLRNVSQRLEGRFEENIDNARGKLDYSYANN KGKFTFGYDYTSHHLKRVSTTVSAPYNEYRDIGLLIHKKHDRAFSEERLKENPDMIIGYS TIAADSMYNNPEDYFLNGKIGEKGIEDFYIKKNKFSLEDKLAKKLYKYATPEMIADYEKK KGTAEEKGVTSLVMEIFKSGVDPMPMMIDINRWYQTDFRKEKVFSLIDQNKLVEKDGKKG VYVKNPASKENTFFEINENTTFEDFARIHETLNSPPITSSTFVSSRIDTKKTTDSFYLHN DYSLTDNFDIGLGLRYEKSKYSGTRKTLTNQIIKMNPGVDRKKFADSASETLDLYTQTSD VVYTERTDRGQDQPGFMILEKLRRLKELRETGQTIIPMVNLTTQYRKTEENIGGDISFSY KLNDTNRMYVKYERAFNTPLPTQMTNKTFDPIHKVRVYWESGIRTEKMNNFEIGFRGMLR KNISFSAAAFLSDTYDEIISVVKDGNSHQTREWRFINLDKTRRLGLELQSEQTFDKLRLK ESVTYIHPKILANNYKDEVMRIANEQMTHLIDGRRKSIRQYFNNSDMKKMKEKERIIAAI DHFYQEEFYQKNIADKEKINHFIEEYVQKNINPFIDNSSDVDNETKKYLKDGIKNNLEND RNYVSIIREQYDYEYSLTNGSFLEEGERIPLAPKVKATFGADYQFTDKLRIGMNTTYIGS YISVEPARVYEIIKTKVPAHFVSDIYGTYHCTEDFSIKFGVNNIFNHQYNLRQDSYTATP APGRTYSAGFSYRF >gi|224531371|gb|GG658181.1| GENE 156 171399 - 172154 700 251 aa, chain - ## HITS:1 COG:CAC3099 KEGG:ns NR:ns ## COG: CAC3099 COG0101 # Protein_GI_number: 15896350 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Clostridium acetobutylicum # 5 251 3 244 244 172 39.0 7e-43 MEFVNLRFSIEYEGTRYLGWQRLGEKQREKTIQGKIEQVLARLFALNPEEVSVIASGRTD AGVHAKEQIANVHLPSGKSPQEIEEYCNQYLPEDIRIFHAHFVEELFHSRFHAKTKEYHY EISLQKPSVFHRNVTWYCPIQLDIEKMKESSQYFLGEHDFLAFSSLKKTKKSTIRRIDRI EIQETEFGLLFRFVGNGFLQNMIRILVGTLIEVGEGKKTKEDIISIFQSKARQKAGFLAP AKGLTLYKVYY >gi|224531371|gb|GG658181.1| GENE 157 172141 - 173097 1313 318 aa, chain - ## HITS:1 COG:FN1169 KEGG:ns NR:ns ## COG: FN1169 COG0039 # Protein_GI_number: 19704504 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Fusobacterium nucleatum # 1 317 1 317 318 570 86.0 1e-163 MLQTKKVGIVGIGHVGSHCALAMLLQGVCDEMVLMDILPEKAKGYAIDCMDTVSFLPHRT IIKDGGIKELSEMDVIVISVGSLTKNNQRLEELKGSMEAIKSFVPDVVKAGFNGIFVVIT NPVDIVTYFVRQLSGFPKHRVIGTGTGLDSARLRRILSETTNIDSHVIQAFMLGEHGDTQ VANYSSATIHGVPFLDYVKTHPEQFKDVDLLDLEKQVVRTAWDIIAGKGSTEFGIGCTCA NLVKAIFHNERRVLPCSAYLEGEYGQSGFYTGVPAIIGNNGVEEILELPLNEREEKRFKE ACEVMKKYIEIGNSYGIC >gi|224531371|gb|GG658181.1| GENE 158 173227 - 174045 652 272 aa, chain + ## HITS:1 COG:no KEGG:FN0898 NR:ns ## KEGG: FN0898 # Name: not_defined # Def: spore photoproduct (EC:4.1.99.-) # Organism: F.nucleatum # Pathway: not_defined # 1 266 1 271 623 150 34.0 8e-35 MVYLFFALYGEAKPFIEKWKLKKQNQYTKYQVFERESFCCVVTGVGSMKMAIHTTHFLSS RNLQEEDIFCNVGIAGTKASHFDKGELYFIHKIHSKESGRDFYPELVYRQKYQEASLETF SKVVEKEEEIQEDLVDMEGAAFFETLHFFAKKKQIFLWKCVSDVLEGERVKPEDLLKKHC DTLALFFEQFHRVENREKELFQKKRRDLEERLWKHLFCSETMRIQGKDLLHYAELSEKNV EKMIQKYLRKEVKTKTEGKKYFEDLRNEILEF >gi|224531371|gb|GG658181.1| GENE 159 174026 - 175036 724 336 aa, chain + ## HITS:1 COG:FN0898_2 KEGG:ns NR:ns ## COG: FN0898_2 COG1533 # Protein_GI_number: 19704233 # Func_class: L Replication, recombination and repair # Function: DNA repair photolyase # Organism: Fusobacterium nucleatum # 4 332 2 330 330 308 48.0 7e-84 MKSWNSNFSHIYVEKEVMNYERTKKIIEKFPKAVVIPIERYQDVFHPVGQEFSYQKQSQK LILAKKQDNFLYKGAKVCESFQNHHFYYTSFFLNCIYDCDYCYLQGVYSSANLVIFVNLE DFLQEVKQLLEEKKELYLCISYDTDLLAFEGITSFVEEWYDFSLEHPSLKIELRTKSAKV LDFSKKKYNPNFILAWTLSPESTSQIFEKKTPNLEHRLEAIQKWQRQGFITRLCFDPIFW KKDFQEEYRNFLKKCFSKLDQEKILDISVGTFRVSKEYLKKMRKQNPNSLLLAYPFVCEE GVYSYPREIQQKMFSFVEEELLQYIEKEKLFIGGKI >gi|224531371|gb|GG658181.1| GENE 160 175033 - 175722 637 229 aa, chain + ## HITS:1 COG:XF0145 KEGG:ns NR:ns ## COG: XF0145 COG4221 # Protein_GI_number: 15836750 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Xylella fastidiosa 9a5c # 3 218 5 234 251 108 30.0 1e-23 MKILVTGATSGIGKAVVERLLQEGNQVTGVGRDFQKYPIEHVCYQKYSCDFRKMAEMETL LRIVAREEWDVVILVAGLGYFAPHEEIHFSKIQEMVQVNLSSAMMIVQATLRNLKKKRGQ IIFVSSVTATKASPMGAAYSATKAGISHFATSLWEEVRKYGVRVSVIEPDMTKTDFYEHN SFDVGEEADNYLLAEEVVDAIFFLLSQRQGMNIRRIEVQPQRHKITRKG >gi|224531371|gb|GG658181.1| GENE 161 175791 - 176756 1415 321 aa, chain + ## HITS:1 COG:lin0191 KEGG:ns NR:ns ## COG: lin0191 COG0803 # Protein_GI_number: 16799268 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Listeria innocua # 1 317 1 309 312 255 44.0 9e-68 MKKRLWALLLAMLCLCIALIGCGKKKEEVVSDKIKVVTSNYPMYDFTKRIAGDTLEVVNL VPPGTEPHDWEPSVQDIAQLEEAKAFIYNGAGMETWVEKVLESLNNKELLVVEASQRVDL LKAEEHEEEHEHEHEHEGHEEHHHHHGEWDPHVWLSLRAAQVEMENIKNLLVEVNPEQKE VYEENYQKAIKEFQSLDEEYKTALSSFKGKEIVVAHEAFAYLCRDYDLHQLGIEGVFADS EPSPAKMKEIIDFVKEHQVKVIFFETLASPKVAEAIAKETGASTDMLNPLEGLTEEEIAA GKDYLSVMRENLESLKKAFVE >gi|224531371|gb|GG658181.1| GENE 162 176766 - 177413 241 215 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 21 209 21 212 311 97 30 5e-19 MKTLIQVEQGYFHYPKQEKLLENINFHIQEGEFTAIIGANGAGKTTLLKLLLEQLSFQRG NITRKYRQISYVSQAQDKLQESFPATVLEVVLLNLRQEIGYFHFTKEKHREKARKALKMV GMERYEKHLLKELSGGQRQRVMIAKALVQEPELLILDEPTTGLDKKSVEDLFDTLTNLNH EKGMAILMISHDLFRVRTWCEHIYLLEEGELYASV >gi|224531371|gb|GG658181.1| GENE 163 177400 - 178218 1000 272 aa, chain + ## HITS:1 COG:CAC2878 KEGG:ns NR:ns ## COG: CAC2878 COG1108 # Protein_GI_number: 15896132 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Clostridium acetobutylicum # 1 249 4 252 268 160 38.0 2e-39 MLQYEFMQKAFFVGLLLSIIVPCIGSFIVLKRLSMLGDALSHASLSGVAFGLLLAWNPLV GAFLACVIAGLGTEYLRKKIPQYSEISIAVITSLGVGFAGVLSSFIKNATSFHSFLFGSI VAISTLEVIMITCVSVLVLFLFLFFYKELFYIAFDEEGARVAGVPVNRINFIVAIITAIT VSIASRTVGALMISSFMVLPMAAAMQVARSYKTTILFAIFYAVCSTLLGLTLSYYYGLKP GGTIVLLSVGIFFCNVIWKSMIGSSSFFNIFQ >gi|224531371|gb|GG658181.1| GENE 164 178104 - 178622 328 172 aa, chain - ## HITS:1 COG:no KEGG:Halhy_2822 NR:ns ## KEGG: Halhy_2822 # Name: not_defined # Def: putative transcriptional regulator # Organism: H.hydrossis # Pathway: not_defined # 11 140 311 439 443 87 38.0 3e-16 MSNICLTTIESKPFNPNIANGFFRAGFIETWGRGIEKICEACSNYGIKIPEYTVYPEDIT LKFEALNTAKNAAKNAASKIDDNFYLVFDYLNQFPTTKHKNIMEDLNISRRTLERIISLL KEQSYIERIGNNRSGYWKILKKEELPIILFQITLQKKIPTDNKTIVPPGFNP >gi|224531371|gb|GG658181.1| GENE 165 178724 - 178954 412 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452862|ref|ZP_05618161.1| ## NR: gi|257452862|ref|ZP_05618161.1| hypothetical protein F3_07334 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_04985 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 76 1 76 76 105 100.0 1e-21 MSVISLRLNEKEEKLLKEFSEFEGLGISSYIKKIIYERLEDEYDIQCFDKAYEEYLESGK KSYSFDEVLNELGIEL >gi|224531371|gb|GG658181.1| GENE 166 178951 - 179223 332 90 aa, chain + ## HITS:1 COG:FN0211 KEGG:ns NR:ns ## COG: FN0211 COG2026 # Protein_GI_number: 19703556 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Fusobacterium nucleatum # 1 87 1 87 88 102 57.0 2e-22 MRYQVEFSQQGKKELKKLDAFAQKIIMKWISKNLINTENPRIHGKELKGNLKSFWRYRVG NYRLLADIQDENITILLIKIGHRREIYDKK >gi|224531371|gb|GG658181.1| GENE 167 179210 - 179320 68 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIKNEKRTDSLYYLGVSPFLLEFRKQQRHRLCIVFR >gi|224531371|gb|GG658181.1| GENE 168 179277 - 180053 1182 258 aa, chain - ## HITS:1 COG:FN0658 KEGG:ns NR:ns ## COG: FN0658 COG1464 # Protein_GI_number: 19703993 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Fusobacterium nucleatum # 7 258 9 261 261 335 69.0 5e-92 MLKKVFTIGSFVVLSSLALAGTLKVGASPVPHAEILNFVKADLKKQGVDLKVVEFTDYVT PNLALSDGELDANFFQHIPYLQKFASERKLKLTSVGKIHVEPIGLYSKKAASLKNLKKGA TIAIPNDPSNGGRALILLHNKKLLVLKEPKNLYATEFDIVKNPNNFKFKAVETAQLPRVL ADVDAALINGNYALESGLNPTKDALLLEGKESPYANVIAVKVGKEKNADIQKLVKTLQNP KVKEFIEKQYKGGVVAAF >gi|224531371|gb|GG658181.1| GENE 169 180077 - 180727 935 216 aa, chain - ## HITS:1 COG:FN0659 KEGG:ns NR:ns ## COG: FN0659 COG2011 # Protein_GI_number: 19703994 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Fusobacterium nucleatum # 2 216 18 232 233 251 67.0 9e-67 MLFNMLWTSSLETLYMVFFSTVFALLLGFPFGILLVITKENGLWEHPKFHQVLETSINIL RSFPFIILMIVLFPLSRVITGTTIGSTAAIVPLAIGTAPFVARMIEGALLEVDSGLIEAS ESMGASNWTIIRKVMIPEATSSLINGITITIISLIGYSSMAGAIGAGGLGDLAIRYGYQR FQIDLMCYAIVILLIIVQATQWIGNWFILKRKKKLG >gi|224531371|gb|GG658181.1| GENE 170 180717 - 181718 1284 333 aa, chain - ## HITS:1 COG:FN0660 KEGG:ns NR:ns ## COG: FN0660 COG1135 # Protein_GI_number: 19703995 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Fusobacterium nucleatum # 1 332 1 334 335 443 70.0 1e-124 MIQLKQVNKIYNNGFHAVKDINLEIQKGDIFGIIGLSGAGKSSLIRMLNRLEETSSGEIW MDGVNINSLSKDQLLKKRKKIGMIFQHFNLLSSRTVSENIAFSLEIANWKKEDIQRRVKE LLELVELSEKANYYPSQLSGGQKQRVAIARALANKPDILLSDEATSALDPKTTKSILDLL REIQKKFSLTVVMITHQMEVVREICNKVAIMSEGKIVEQGGVHHIFSNPTSEITKELISY VPEKKEQNFTRKKGHMLLKLNFLGSISEEPIISNIIRTCAIDISIISGKIDTLATMNVGH LYVELSGNLEAQEKAIAAFQEADVKVEVIYNAL >gi|224531371|gb|GG658181.1| GENE 171 181955 - 182410 321 151 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257452857|ref|ZP_05618156.1| ## NR: gi|257452857|ref|ZP_05618156.1| hypothetical protein F3_07309 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_05010 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 151 1 151 151 257 100.0 3e-67 MKKITFLFFIFLLLPSKIFAFSFDTEVKKYYDIPKIQKNFPTSKVRRQNASYDAITIENN FQGYTIILAHFDTPIQAKSFFYQTIQDAAKQNLKLFLSENGYTTLLDIDRGIIYGILTEE ENCISVRFTNIDTISEILPILDKNIDSWKMI >gi|224531371|gb|GG658181.1| GENE 172 182585 - 182935 552 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739925|ref|ZP_04570406.1| LSU ribosomal protein L19P [Fusobacterium sp. 2_1_31] # 1 116 1 116 116 217 93 5e-55 MKEKLIQLVEKDYLRTDIPQFKAGDTIGVYYKVKEGNKERVQLFEGVVIRVNGGGIAKTF TVRKVTAGIGVERIIPINSPMIDKIEVLKVGRVRRSKLYYLRGLSAKKARIKEIIK >gi|224531371|gb|GG658181.1| GENE 173 183056 - 184003 1034 315 aa, chain + ## HITS:1 COG:FN0370 KEGG:ns NR:ns ## COG: FN0370 COG0681 # Protein_GI_number: 19703712 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Fusobacterium nucleatum # 10 295 8 284 286 272 47.0 6e-73 MRNHILWNVIIYVIVTSFFLYIWWKQKKLAGIIEQYRIRFGNWIIEKFNVQAEAAKKAIQ RFIDVTEALVTALVLVLVLQHFYVGNFKIPTPSMVPTIEIGDRVLANMVVYRFTSPKKED VIVFKEPIEDSKNYTKRVIALPGETIKIEGNAVYTDNQKNEKRSYSILPSTSDIPRSLME GEEWKVPKKGDHITVVPSTNYKQLFVENGLNPNEIQKGIMENAALAFMFMPNLQFYINGE PTGPILDFLHDNSSLNHLMAGEVVEQDLDQDYYFVLGDNTDHSADSRIWGFVKKERITGK VLFRFWPLNRVGFVK >gi|224531371|gb|GG658181.1| GENE 174 184004 - 184414 198 136 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228002792|ref|ZP_04049785.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Anaerococcus prevotii DSM 20548] # 1 136 1 143 146 80 32 5e-14 MLRRLEQEDIDFLYALEQTNFPTSYYSKSQLLEMLSDEAYSIYGIERDKKLIAYVIFFNS IDCQELMKIAVSQEYRRQGLATKLLEVEKRRPILLEVRESNLGAQEFYKQHGFEKIYVRK QYYRDNGENAVILEKK >gi|224531371|gb|GG658181.1| GENE 175 184428 - 185861 1842 477 aa, chain + ## HITS:1 COG:FN0368 KEGG:ns NR:ns ## COG: FN0368 COG0015 # Protein_GI_number: 19703710 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Fusobacterium nucleatum # 1 477 1 477 477 760 82.0 0 METKIYSNPLAERYSSKEMLEVFSPDFKFSTWRKLWVALAESEKELGLEIQDEQIQQMKE NIYDIDYTLASQKEKEFRHDVMAHVHAFGTQAPLAMPIIHLGATSAFVGDNTDLIQIREA LLLTKQKMVNVMAELSKFAKENRALPTLGFTHFQAAQLTTVGKRACLWLQSLMLDLEELE FRNSTLRFRGVKGTTGTQASFKDLFEGDFQKVRELDEKVTEKMGFDKRFLVTGQTYDRKV DSEVMNLLANIAQTAHKFTNDLRLLQHLKEIEEPFEKNQIGSSAMAYKRNPMRSERISSL AKFVIALQQSTAMTAATQWFERTLDDSANKRLSLPQAFLAVDAILIIWKNIMDGLVVYPK MIEKRIMSELPFMATEYIIMECVKQGGDRQELHERIRQHSMEAGKQVKVEGKENDLIDRI LADDYFKLDKERLLEILDPKSFTGFAAEQVLDFLELEIQPILEKNKDQLGMNSELRV >gi|224531371|gb|GG658181.1| GENE 176 185864 - 186406 455 180 aa, chain + ## HITS:1 COG:FN0367 KEGG:ns NR:ns ## COG: FN0367 COG4769 # Protein_GI_number: 19703709 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 4 167 5 168 172 152 60.0 5e-37 MEVKKKREVYIAAFVLLALYLSLLESLIPKPFPWMKFGFSNIIILVILEKWDKKMAFEVL LLRIFIQALMLGTMFSPGFLVSLCSGFLSLCLTTMLYRVRKYLSLLSISCLSAMFHNAIQ LVVVYFLLFRNISLQSKSIMIFVFGFLLLGVISGLITGILVSKLALRIPRSKDKKETEVV >gi|224531371|gb|GG658181.1| GENE 177 186403 - 187761 2096 452 aa, chain + ## HITS:1 COG:FN0366 KEGG:ns NR:ns ## COG: FN0366 COG1109 # Protein_GI_number: 19703708 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Fusobacterium nucleatum # 1 451 1 451 452 611 69.0 1e-175 MRKYFGTDGIRGEANRELTVDIALRLGYALGYYLKKKSTEKKKIKVILGSDTRISGYMLR SALTAGLTSMGVQVDFVGVLPTPAVAYITKTKKADAGVMISASHNPAKDNGLKVFGSTGY KLPDEVEEEIEYFMDHLGEISTEVLAGDEVGKFKYAEDEYYLYRNYLLSSVKGDFQGIKL IIDAANGSAYRVAKDVFLELGAEVIVINDTPNGKNINVKCGSTHPEILSKVVVGYEADLG LAYDGDADRLIAVDKSGKIVDGDKVIAILSVLMKQHGELHQNGVVTTVMSNMGLENYLKS QGISLVRASVGDRYVLEKMLANGINIGGEQSGHIILSDYATTGDGVLTSLKLVEAIRDAK KDLHEMIREIKDWPQVLINVTVDNAKKNSWKEFPVLTSFIAKMEEEMGENGRVLVRTSGT EPLIRVMVEGREETQVQEIAEKIAEVVRTELA >gi|224531371|gb|GG658181.1| GENE 178 187791 - 188507 1025 238 aa, chain + ## HITS:1 COG:BS_yqeM KEGG:ns NR:ns ## COG: BS_yqeM COG0500 # Protein_GI_number: 16079615 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Bacillus subtilis # 1 218 2 219 247 114 30.0 1e-25 MYKHFSKIYDNFMQYADYTKWKEEIEKLILLGQPKGKELLELGCGTGELLKRFEKDYHCH GLDISEHMLKVAQEKLAAQKIPLYLGDMVDFDTGDRYDIIIAIFDTVNHIVDMIDLKRHF RTVFANLKPGGVYIFDIVDRAFMDEMFPNDVFVDVRDDLTVIWEHELEDGIDYIDATYFT HLVGSRYRRVEETYAKKIYHRRELEHAIRRSNLKIQKVVTSTGIAGNRYMYLLKKEEL >gi|224531371|gb|GG658181.1| GENE 179 188507 - 188761 314 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257452849|ref|ZP_05618148.1| ## NR: gi|257452849|ref|ZP_05618148.1| hypothetical protein F3_07269 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_05050 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 84 1 84 84 122 100.0 1e-26 MSGFFNRDFFYYLSLFSQLGITMVGNIAVSLFLYLIFAKYVFRHPLILFLFLLLGIVSGY YQVYKLITQKKERGKKGGRHQDDF >gi|224531371|gb|GG658181.1| GENE 180 188736 - 189110 142 124 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_0200 NR:ns ## KEGG: Ilyop_0200 # Name: not_defined # Def: ATP synthase I # Organism: I.polytropus # Pathway: not_defined # 2 117 3 117 127 79 38.0 3e-14 MEDIKTIFKHAGISAILVFLYGLLIWNFYVLIGTFSACLVSILSFYSLCEDVKTQVFLKD DSRRRAFLRYLKRYVLSGVYLAVLGYFWGLPMILSAAVGLLNIKLNIYLLPIFKKLKNYS RKEE >gi|224531371|gb|GG658181.1| GENE 181 189114 - 189920 1087 268 aa, chain + ## HITS:1 COG:FN0364 KEGG:ns NR:ns ## COG: FN0364 COG0356 # Protein_GI_number: 19703706 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Fusobacterium nucleatum # 51 268 1 218 218 259 68.0 5e-69 MSFQALQFVTPALVEGPKVVFFIPLPSSLQHLPFVMQYGQGHYGWPVSITVVTTWFLILM LFLFFKLCTKKLEIVPGKPQILLESIYEFLDNLMEQMLGAWKAKYFAFLGSLFLFIFPAN IISFFPIPWARFTGGTFSIEPAFRAPTADLNTTIGLALLTTIIFIATSIKQNGVWGYLKG FFSPLPIMAPLNVVGELAKPLNISVRLFGNMFAGSVIMGLLYKACPWVIPAPLHLYFDLF SGLVQSFVFVTLSMVYIQSSLGDAEYLD >gi|224531371|gb|GG658181.1| GENE 182 189946 - 190221 727 91 aa, chain + ## HITS:1 COG:FN0363 KEGG:ns NR:ns ## COG: FN0363 COG0636 # Protein_GI_number: 19703705 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Fusobacterium nucleatum # 5 91 3 89 89 101 83.0 3e-22 MMEGMLMAKAIVLAGSGIGVGLAMIAGLGPGIGEGYAAGKAVEAVARQPEARGNIISTMI LGQAVAESTGIYSLVIALILLYANPLINMLG >gi|224531371|gb|GG658181.1| GENE 183 190261 - 190767 755 168 aa, chain + ## HITS:1 COG:FN0362 KEGG:ns NR:ns ## COG: FN0362 COG0711 # Protein_GI_number: 19703704 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Fusobacterium nucleatum # 6 167 1 162 163 112 45.0 4e-25 METTTMPVISIDVNLFWQIINFFILVFVFNKYFKTPIQRILTERKKKITSELHSATLSKE EAKVSAKQAETALKEARDEAHEILKKAEYRAEEVRNEILADARLQKERMLREASEEVMRL KAKARRDLHQEVTSLAVELAEKLMKKNIDKQTATDLIDDFIERVGDEA >gi|224531371|gb|GG658181.1| GENE 184 190764 - 191297 537 177 aa, chain + ## HITS:1 COG:FN0361 KEGG:ns NR:ns ## COG: FN0361 COG0712 # Protein_GI_number: 19703703 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Fusobacterium nucleatum # 1 168 1 168 174 136 57.0 2e-32 MIENQVGRRYAEAIYTIAEERGKVKETHTFLNSIMELYKNDITFRNFIQHPLLKVQEKEE VLREIFAEVSDELLQIAFYILEKGRISFIRNIVAEYLKIYYEKHQILDVVATFAVELSEE QKTKLIQKLKDKTKHEIRLETQVDESILGGGILKIGDQVMDGSLRKELQQIKNGKKS >gi|224531371|gb|GG658181.1| GENE 185 191316 - 192818 1977 500 aa, chain + ## HITS:1 COG:FN0360 KEGG:ns NR:ns ## COG: FN0360 COG0056 # Protein_GI_number: 19703702 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Fusobacterium nucleatum # 1 499 1 499 500 801 83.0 0 MKIRPEEVSEIIKKEIENYKKSLDVKTSGTVLEVGDGIARIYGLSSVMSNELLEFPNGVM GMALNLEENNVGAVILGNASLIKEGDGVKATGRVVSVPAGEGMLGRVVNALGEAIDGKGE IRPSKYMPVERKASGIISRQPVFEPLQTGLKSIDGMVPIGRGQRELIIGDRQTGKTAIAL DAIINQKGNGVKCIYVAIGQKRSTIAQIFQKLEDAGAMEYTTIVAATASEAAPLQYLAPY SGVAMGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLER AAKLSPELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETQLFNSGFRPAINAG ISVSRVGGAAQIKAMKQVASKVKLELAQYNELLTFAQFGSDLDKATKAQLDRGNRIMEVL KQAQYRPYPVEEQVVSFFGVTNGYLDSIPVERVKAFEEELLGKLRASSTILDRIREEKAL SKELEAELRAFIESFKKTFE >gi|224531371|gb|GG658181.1| GENE 186 192833 - 193681 939 282 aa, chain + ## HITS:1 COG:FN0359 KEGG:ns NR:ns ## COG: FN0359 COG0224 # Protein_GI_number: 19703701 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Fusobacterium nucleatum # 1 282 1 282 282 317 60.0 2e-86 MASSKKIKTRIKSIQSTHQITKAMEIVSTTKFRRYSLLAKESQAFSDSIQKILTNISMGV KAEKHPLFDGRERVRNIGVIVVTSDRGLCGSFNSSTLKELEKFRKKHDDQHIFIIPVGKK GRDYCEKRGYNVIQDYVGVDNYNMLTITEEISKVIVDRYQEEKLDEVYIIYNKFISALRS DLTLSKVIPITRLEGEENRGYIFEPSAEEVLSSLLPRYIGVTVYQAVLNNTASEHSARKN AMKNANENAEDMIRQLDLKYNRERQAAITQEITEIVGGAEAL >gi|224531371|gb|GG658181.1| GENE 187 193705 - 195102 1862 465 aa, chain + ## HITS:1 COG:FN0358 KEGG:ns NR:ns ## COG: FN0358 COG0055 # Protein_GI_number: 19703700 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Fusobacterium nucleatum # 1 462 1 462 462 790 88.0 0 MNKGKITQIISAVVDVEFKDELPKIYNALKVQVGEKELVLEVQQHLGNNVVRTVAMDSTD GLLRGMEVMDTGAPITVPVGKAVLGRILNVLGEPVDQKGPVETEEYLPIHREAPKFEEQE TVTEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVG ERTREGRDLYNEMTESGVLNKTSLVYGQMNEPPGARLRVALTGLTVAENFRDKEGQDVLL FIDNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGTLQERITSTKSGSITSVQAVYVP ADDLTDPAPATTFSHLDATTVLSRDIASLGIYPAVDPLDSTSKALSPDIVGKEHYEVARE VQRVLQRYTELQDIIAILGMDELGDEDKLVVSRARKIQRFFSQPFAVAEQFTGMEGKYVS IKDTIRGFKEILEGKHDELPEQAFLYVGTIEEAVLKGRDLMKGAE >gi|224531371|gb|GG658181.1| GENE 188 195120 - 195380 383 86 aa, chain + ## HITS:1 COG:FN0357 KEGG:ns NR:ns ## COG: FN0357 COG0355 # Protein_GI_number: 19703699 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Fusobacterium nucleatum # 2 83 6 89 134 79 50.0 2e-15 MVKVVTPTKVVLEQEADFLLVRTTEGDMGILGNHFPLVAALADGQMKIRKDKREKFFRVE GGFIEISNNQVTILSNQAYPQEERVI >gi|224531371|gb|GG658181.1| GENE 189 195775 - 196713 1453 312 aa, chain + ## HITS:1 COG:SP1359_1 KEGG:ns NR:ns ## COG: SP1359_1 COG0225 # Protein_GI_number: 15901213 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Streptococcus pneumoniae TIGR4 # 1 162 1 162 163 207 62.0 2e-53 MKEIYLAGGCFWGVEGYFRRIDGIEDVKVGYANGKTEEANYQNLKITEHAETVKVIYREQ EIDLETILEHYFRIIDPTSLDQQGHDKGRQYRTGIYYTDEKDLPVIQEFYQSVERLYQER LMVEVEKLQHFILAEDYHQDYLGKNPNGYCHIPLHLAFEPLVKIQSYVKKSKVELEKDLT ELQYLVTQKAATELAYENEYWSQAEEGIYVDITTGEPLFSSKDKFDSGCGWPSFSKAFSS GVLRYYHDESHGMKRIEVKSRIGDAHLGHVFEDGPKKLGGLRYCINSASLRFIPLEKMEE EGYGEYVKYIAK >gi|224531371|gb|GG658181.1| GENE 190 196724 - 197149 631 141 aa, chain + ## HITS:1 COG:FN1548 KEGG:ns NR:ns ## COG: FN1548 COG1585 # Protein_GI_number: 19704880 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Fusobacterium nucleatum # 1 138 1 138 138 87 40.0 8e-18 MGIVFWIILACIFAGLEIIIPALITIWFAFAALLLVMLSFFNFFILSPFMEWKFFIFVSV ILLLLTRPFSKKYFQNQKEEFRGDWVGKELVIEKVIREGYYEAKFKGSIWTLLSEDSLGV GDIVKIVSYEGNRIIVKKKEA >gi|224531371|gb|GG658181.1| GENE 191 197153 - 198043 1254 296 aa, chain + ## HITS:1 COG:FN1549 KEGG:ns NR:ns ## COG: FN1549 COG0330 # Protein_GI_number: 19704881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Fusobacterium nucleatum # 1 296 1 294 294 412 78.0 1e-115 MFIFSIFPYFFIFLLIILFISKGIKIVPESNVYIVEKLGKYHQSLSSGLNFINPFFDRIS RVVSLKEQVVDFPPQPVITKDNATMQIDTVVYFQITDPKSYTYGVERPLSAIENLTATTL RNIIGDMTVDQTLTSRDIINTKMRVELDEATDPWGIKVNRVELKSILPPEDIRVAMEKEM KAEREKRATVLEAQAKRESAILVAEGEKQSTILRAEAAKESEIQEALGKAQAILEIRKAE AEGIRLLNEAKITKEVLSLKSFESLEKVAEGQATKIIIPSELQNLSSFVTAIREMK >gi|224531371|gb|GG658181.1| GENE 192 198065 - 199036 1305 323 aa, chain + ## HITS:1 COG:BS_yvcK KEGG:ns NR:ns ## COG: BS_yvcK COG0391 # Protein_GI_number: 16080529 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 315 15 329 331 319 51.0 4e-87 MRKQPSIVVLGGGSGISVLLRGLKHLPVDITTIVTVADSGGSSGVLRKEFSCLPPGDFRN VIAALSEVEPLMEEVFQYRFQKDTFLGGHPLGNLIIMAMTELTGNLQESIDSLRKLFNIK AQILPASLDNVTLAAKKIDGSIVEGENEIPRTNQKIQEVFYTTKVKPIPKTLEIIKKADL IILGMGSLYTSLIPHLLVEGISESIAKSKAKKIYICNAMEQPGETEQYTVSDHVKAIYQH SQEGLIDTILVDSHSIPKREMKRYEEAGVSRVEIDFPKLQELGLEVIDRNMIEVDKKGMI RHHPYRLAAVIYSLIDHWERFYD >gi|224531371|gb|GG658181.1| GENE 193 199038 - 199229 158 63 aa, chain + ## HITS:1 COG:no KEGG:Moth_1713 NR:ns ## KEGG: Moth_1713 # Name: not_defined # Def: sigma-54 dependent trancsriptional regulator # Organism: M.thermoacetica # Pathway: not_defined # 1 63 1 66 748 61 43.0 9e-09 MKRKAKCIESNCIMCRACFTNCPVKAIDRKININRELCIGCGTCMKVCQHGAMILEEVED EIQ >gi|224531371|gb|GG658181.1| GENE 194 199216 - 200496 1317 426 aa, chain + ## HITS:1 COG:FN0185 KEGG:ns NR:ns ## COG: FN0185 COG3593 # Protein_GI_number: 19703530 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Fusobacterium nucleatum # 39 426 1 397 400 462 61.0 1e-130 MKFNKIQVKNWGNFVDISLDCEDFLIFTGASDTGKSSLMKAILSFFRVRNLREGDIRDSK FPLEMIGNFIEKTGEFQLKFLKKNAEEIRYFVRYSAEWQEISEKEFQDFIQPISVFYIPS VLEESQMDYLFERVFQNEKLKAYHRFWEEYQEARKNRKSHGFYRHLFLRFLCEIATHEEK NNFWEHSILLWEEPEFYLNPQEERACYEKLLEHSRLGLQIIVSTNSSRFIDLEQYQSICI FRKKEEETRVYQYRGNLFSGDEVTEFNMNYWINPDRSELFFARKVILVEGQTDKIVLSYL AKKLGVYSYDTSIIECGSKSTIPQFIRLLNAFKIPYVVVYDKDNHLWRNPTEIFNSNQKN RSIQKMIYKKFGSYVEFENDIEEEIYNEDRERKNYKNKPFYALETVMQENYKIPKKLREK VYRIFE >gi|224531371|gb|GG658181.1| GENE 195 201760 - 202647 835 295 aa, chain - ## HITS:1 COG:FN0354 KEGG:ns NR:ns ## COG: FN0354 COG0697 # Protein_GI_number: 19703696 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 70 292 2 224 224 173 45.0 3e-43 MRNYILKKYATRFYAFLAVFFWASAFVSTKIVLQSGQLSAMDLGTLRYFFAAVLLLPLAI LFKVRLPDSRDLSKFAISGILGYTAYMFFFNTASTMITPSTASVINAICPGVTAIFAYFL FYEKISWKGIFGLGISFIGILFLSLWNGSFSLNIGVLYMLAAALCLSMYNISQRSFVKRY NAMETMTHCLLAGSLFLLLCHGKSLTLIPSLSKQMWIHLLYLAIFPSILSYYCWAKAMEC CNKTTEVTNFMFVTPMLATFLSFLMIKEFPTWSTYFGGALILLGMLLFQIEKTAS >gi|224531371|gb|GG658181.1| GENE 196 202669 - 204102 1364 477 aa, chain - ## HITS:1 COG:FN1418 KEGG:ns NR:ns ## COG: FN1418 COG1167 # Protein_GI_number: 19704750 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Fusobacterium nucleatum # 1 469 1 471 475 648 67.0 0 MKTKIIRDAKHNISMQLYEILKEDILQNNWKENTKFYSIRQISIKFQVNLNTVLKVFQTL EEEGYLYSIKGKGCFIKKGYNLDVNERMTPILNTFRFGQNAKGQEINFSNGAPPKEYFPV EAYQNILSEILSDIEGSKNLLGYQNIQGLESLRQELTQFVKPYGITVSKDNIIVCSGTQN VLQLISTTLGTVPRKTVLLSNPTYQNAVHILESSCNIENIDLQSDGWDMKKLEEILQNKK IHLVYVMTNFQNPTGVSWSLEKKKQLLEFSKKYDFYIIEDDCFADFYYERKMAKPIKAFD KEGRVLYLKTFSKLVMPGVGLAMLIPPKNFVEKFTINKYFIDTTTSGIHQKFLELFIKRG LLEKHLEQLREILGQRMKYMVEKLQKIPHLRILHIPKGGFFLWIELANYIDGEKFYYKCR LRGLSILPGFIFYSNTKNSCKIRISIVSSSFDEMQIGCQIIQDILEHCEGVSEMKLP >gi|224531371|gb|GG658181.1| GENE 197 204228 - 205415 1952 395 aa, chain + ## HITS:1 COG:FN1419 KEGG:ns NR:ns ## COG: FN1419 COG0626 # Protein_GI_number: 19704751 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Fusobacterium nucleatum # 1 395 1 395 395 684 85.0 0 MEMKKCGLGTTAIHGGAVKNPYGSLAVPVFQTSTFIFDSAEQGGKRFALEEPGYIYSRLG NPTTSILEARVAALEEGEAAVAMSSGMGAISSTLWTVLKAGDHVVTDTTLYGCTFALMNH GLTKFGVEVSFVDTSDLEAVKKAMKPNTRVVYLETPANPNLKIVDLEAIAKLAHTNPYTL VIVDNTFATPFLQKPLKLGVDIVVHSATKYINGHGDVIAGLAITNQELANQIRLVGLKDM TGSVLGPQEAYYILRGLKTFEIRMERHCKNAEKVVEYLCKHDKVEKVYYPGLVDHPGHEV AKKQMRAFGGMISFELKGGIEAGKTLLNNLKLCSLAVSLGDTETLIQHPASMTHSPYTKE ERMAAGITDGLVRLSVGLENVEDIIADLEYGLSKI >gi|224531371|gb|GG658181.1| GENE 198 205433 - 206782 2152 449 aa, chain + ## HITS:1 COG:FN1420 KEGG:ns NR:ns ## COG: FN1420 COG1757 # Protein_GI_number: 19704752 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 5 448 2 445 445 620 78.0 1e-177 MLENQVKASFKGLIPFIVFIVIYLGAGMILQSQGVELAFYQLPGPVAAAAGIVVAFILFK GTIEEKFNTFLEGCGHQDIMTMCIIYLLAGAFAVVSKAMGGVDSTVNLGITYIPPHYIAV GLFVIGAFISTATGTSVGAIVALGPIAVGLGEKSGVPMALILAAVMGGAMFGDNLSVISD TTIAATKTQGVEMRDKFRINLFIAAPAAIITIILLFMFGRPDVVPEAMSYDFNIVKVLPY VFVLVMALIGINVFVVLASGVLLSGIIGFAYGDFTLLTFGQQVYNGFTNMTEIFILSMLT GGMAQMVTKQGGIQWVIEKIQTMVVGTKSAKFGIGMLVGLTDIAVANNTVAIIINGEIAK QLSTKYEVDGRESAAFLDIFSCVAQGAIPHGAQMLILLGFAKGAVSPTQLMPLLWYQILL FIFSVVYIMMPQLSKQVLNFLDKPQSKKA >gi|224531371|gb|GG658181.1| GENE 199 206844 - 210416 5096 1190 aa, chain + ## HITS:1 COG:FN1421_1 KEGG:ns NR:ns ## COG: FN1421_1 COG0674 # Protein_GI_number: 19704753 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Fusobacterium nucleatum # 1 409 3 411 412 777 91.0 0 MKRIMKTMDGNQAAAYASYAFTEVAGIYPITPSSPMAEYVDEWASKGMKNIFDVPVKLVE MQSEAGAAGTVHGSLQAGALTTTYTASQGLLLKIPNMYKIAGELLPGVIHVSARSLSVQA LSIFGDHQDIYATRQTGFTMMASGSVQEVMDMATVAHLTAIKSRVPVLHFFDGFRTSHEI QKIELMDYDVCKKLVDYDAIQAFRDRALNPEHPVTRGTAQNDDIYFQTREAQNKFYDAVP DIAAYYMEEISKETGRDYKPFKYRGAADATRVIIAMGSICPAAEETVDYLVEKGEKVGLL TVHLYRPFSEKYFFNVLPKTVEKIAVLERTKEPGAPGEPLLLDVKGLFYGKVNAPVIVGG RYGLSSKDTTPAQIKAALDNLKLDNPKTNFTVGIVDDVTFTSLEVGERLVVSDPSTKACL FYGLGADGTVGANKNSIKIIGDKTDLYAQGYFAYDSKKSGGVTRSHLRFGKNPIKSTYLV SSPMFVACSVPAYLNQYDMTSGLKEGGKFLLNCVWDKEEALQRIPNNVKRDIARANGKLY IINATKLAHDIGLGQRTNTIMQAAFFKLAEIIPFEEAQQYMKDYAYKSYGKKGDDIVQLN YKAIDVGASGLIELEVDPAWKDLEVVDQVKEDKNNDTCNCKTDLLKTFVKDIVEPINAIK GYDLPVSAFTGREDGTFENGTASFEKRGVAVDVPEWIVDNCIQCNQCSYVCPHAAIRPFL ITEEEKKASPVELITKKAVGKGLEDVTYRIQVTPLDCVGCGSCVNVCPAPGKALVMKPIA NALELEEDKKATYLYGSVPYRTDRMPTSTVKGSQFSQPLFEFNGACPGCGETPYLKVISQ MFGDRMMVSNASGCSSVYSGSAPSTPYTKNCHGEGPAWASSLFEDNAEYGFGMHIGVEAL RDRLQHIMEGAMEEVSPALQGLFREWIENRAYAAKTREVSPKIIELLEGKEEAYAKEILG LKQYLIKKSQWVVGGDGWAYDIGYGGLDHVLATNEDINIIVMDTEVYSNTGGQASKATPT GAVAKFAAAGKPVKKKDLAAICMSYGHIYVGQVSMGANQQQFLKAIQEAEAYNGPSIIIA YAPCINHGIKKGMSKSQTEMKLATECGYWPIFRYNPLLEAEGKNPLTLDSKEPKWELYQD YLMGETRYLTLMKTNPNEAKALFDKNQWDSQRRWRQYKRLASLDFSEEKR >gi|224531371|gb|GG658181.1| GENE 200 210430 - 211290 1000 286 aa, chain + ## HITS:1 COG:no KEGG:Odosp_3333 NR:ns ## KEGG: Odosp_3333 # Name: not_defined # Def: hypothetical protein # Organism: O.splanchnicus # Pathway: not_defined # 11 286 10 322 322 314 53.0 3e-84 MKKILSILFVLLISQFTFAAPSLGTEYKLSKVIEVEGRQGIAVDKDYYYISSSTALYKYD KSGNLVQKNTNPFTKLEKEANHFGDIDVWNGEIYTGIEIFEFGTSKNIQVAVYDAATLEY KYSIPWDAESGQVEVCGLAVDRDNNTVWMADWTKGRYLYCYDLATKKYERKVHLRPDPQY TQGIYCIDGKMLISADDGDADFHESDNIYVADISDKKQTASYVSLFREMSDFKRAGEIEG LSIDPTNSDLLVLANRGTRVDRGMPVGFYEGYDKEIHELYVYTKVR >gi|224531371|gb|GG658181.1| GENE 201 211370 - 211675 360 101 aa, chain - ## HITS:1 COG:FN1010 KEGG:ns NR:ns ## COG: FN1010 COG1799 # Protein_GI_number: 19704345 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 96 1 93 98 86 44.0 1e-17 MEKETSIVFLKPKRFEDCDDCVRYVAEDKIVNVNLKDLKEKDARRLYDYVHGAVYVKQAK LIDIGENIFCCVPKNINSEVKYNQGNTSKSNEEEEIIPFAK >gi|224531371|gb|GG658181.1| GENE 202 211690 - 212634 276 314 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B [Streptococcus pneumoniae SP18-BS74] # 4 314 6 309 311 110 28 5e-23 MKNKIRELLLQYDSILITAHKNPDGDAVGAGLALTLSLLELGKKVRFVLQDKIPDTTLFL EGSHLIEQYQEEENFQNIELVVFLDCATRDRAGCMNHLTEGKTTINIDHHMSNPHYGDYA FVEPNISATSEILTQLLREWNFPMNVAIASALYLGIVNDTGNFEHDNVTVNTLKAAQFLV EQGANNAMIVRNFLKTNSYASLKLLGEALFHFQFFEEKKLSYFYLTKEVMNKYAAKKEHT EGIVEKLLSYEKASVSLFLREEEDGSIKGSMRSKDSIDVNQIAAYFGGGGHVKAAGFSSQ DCADIILNKILELL >gi|224531371|gb|GG658181.1| GENE 203 212624 - 213184 574 186 aa, chain - ## HITS:1 COG:FN0039 KEGG:ns NR:ns ## COG: FN0039 COG1658 # Protein_GI_number: 19703391 # Func_class: L Replication, recombination and repair # Function: Small primase-like proteins (Toprim domain) # Organism: Fusobacterium nucleatum # 1 180 1 180 183 194 57.0 1e-49 MKPKIQEIIIVEGRDDISAVKAAVDAEIIQVNGFAIRKKGNIDKIKKAYEKKGIILLTDP DYAGNEIRSFLQKHFPKAKNAYISRSEGKKGDDIGVENAKPEAILRALELAKCNIEKQEN AYSIQFLYDLELVGHPRSTKYREIFTSILGIGYSNGKQLLSKLNRYGFSEEEILKAHQKM KEEYEK >gi|224531371|gb|GG658181.1| GENE 204 213372 - 214763 1526 463 aa, chain - ## HITS:1 COG:FN0040 KEGG:ns NR:ns ## COG: FN0040 COG0017 # Protein_GI_number: 19703392 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Fusobacterium nucleatum # 3 463 1 461 461 760 80.0 0 MEMTTVKSIFRNKGTYIDKEVKLGAWVRKIRSQKNFGFLEINDGSFFYGIQVVFDTSLEN FDEISRLSIASSVIVEGTLVKSEGAGQEFEIKASKVEVCQKADLDYPLQNKRHSFEFLRT KSHLRARTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEMFRITTLD LNNVPKNEDGSINFQKDFFGKSTNLTVSGQLNGETYCAAFRNIYTFGPTFRAEYSNTARH ASEFWMIEPEMAFADLEVNMDIAEKMVKYIIRYVMETCPEEMNFFNQFIEKGLFDKLNNV LNNDFGRLTYTEAIDILEKSGKKFEYPVKWGIDLQSEHERYLAEEHFKKPVFLVDYPKDI KAFYMKLNEDGKTVRAMDLLAPQIGEIIGGSQREDNLEILETRMNELGMDKEDYSFYLDL RKYGSFPHSGYGLGFERMIMYLTGMANIRDVIPFPRTPNNIEF >gi|224531371|gb|GG658181.1| GENE 205 214791 - 214985 387 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257466812|ref|ZP_05631123.1| ## NR: gi|257466812|ref|ZP_05631123.1| hypothetical protein FgonA2_05180 [Fusobacterium gonidiaformans ATCC 25563] asparagine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563] asparagine-tRNA ligase [Fusobacterium gonidiaformans ATCC 25563] # 1 64 1 64 64 79 100.0 8e-14 MEMKDIIEKVNYYSRLSKKRALTAEEEADRAIWRKRYLEKLTSQVRKHLDSIQIVDEKEQ NKIQ >gi|224531371|gb|GG658181.1| GENE 206 215032 - 216273 1625 413 aa, chain - ## HITS:1 COG:FN0042 KEGG:ns NR:ns ## COG: FN0042 COG0772 # Protein_GI_number: 19703394 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Fusobacterium nucleatum # 33 406 39 416 417 204 34.0 2e-52 MKRKETVHENIYDKYQKLHESGEELEKQVSRNKRSSALLMILFIILSLSIANMFSVSLGL RNDQLGLVKKHTLMIFIGLFLCFVLSKISYKTFQKSFAKKALYIIPPLIFIGMMLAPSSI VPVRNGARAWIQLGGFAIQPAELFKVSYIILLSGVLARIEDENSLKDYTLIGLVGGFIFL PYAVFIHFQNDLGAIIHYALITGYLFVLSNVSIKIIRLWSLIGGVAIVSAFSLIYKLGAD NLSGYKLKRIYSFLDGLFTGNYSPEFGYQVRQALIGFGSGGFLGKGFANGIQKYSYVPET ATDFISVTFGEEFGLLGMFILLSFYLILYWIICTISKECQDSFGKYLSAGIGAYLIIQVF INIGVAIGILPVFGLTLPLFSNGGSSIFAILSALGICLNINKTSHLFEKKKKK >gi|224531371|gb|GG658181.1| GENE 207 216417 - 217109 793 230 aa, chain + ## HITS:1 COG:FN1996 KEGG:ns NR:ns ## COG: FN1996 COG1738 # Protein_GI_number: 19705292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 2 230 3 233 235 274 60.0 1e-73 MQNEILWAIMLLCNFLCIMAIYYRFGKIGLFAWVPVATILANIQVVMLVRLFGMEVTLGN ILYAGGYLVTDILAENYGKEEAKKAVYLGFFSMIAMTIIMQVAIHFTPSSAGIELFDGVK GVFALMPRLAIASLLAYLISQQHDIWAYEFWRHRFQDRKYIWIRNNASTMVSQLLDSFIF TVVAFYGVFPLPVLWEVFIGTYLIKFLVAICDTPFIYLGEYLKRMGKIQE >gi|224531371|gb|GG658181.1| GENE 208 217060 - 218055 612 331 aa, chain - ## HITS:1 COG:no KEGG:FN0917 NR:ns ## KEGG: FN0917 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: Purine metabolism [PATH:fnu00230]; Pyrimidine metabolism [PATH:fnu00240]; Metabolic pathways [PATH:fnu01100]; DNA replication [PATH:fnu03030]; Mismatch repair [PATH:fnu03430]; Homologous recombination [PATH:fnu03440] # 11 321 1 322 322 135 31.0 3e-30 MFYFFYGNQSLLELELKKRREEYSQKNYIIHSFDFSNQEEEIFLQELSMNSMFAETKCFL VKRVEHFKGNQLSNLLKGMSLFDLSKKEIFFFYAEKEIGKTVEKELTKLGTEITIFTEEE QEKNLKHYLEKKLSLSSYDAEKLLEMLGKNFHKIEQESNKILQFLDGESFSFEKVFPILS IEKEYNIFSIIDQFLEQESPQILLEYLQQNKNDISVILYNLAESVFLIAKISSLIEQDQI DDRVSYTNFKTSFSKIQQYFRGKGNRILYPYPVYLKIKIAKKHPISFWLKKLNEILLCEY QFKSGFMDIQMSVEQFILGFYPFSLSIPQDK >gi|224531371|gb|GG658181.1| GENE 209 218151 - 219686 1361 511 aa, chain + ## HITS:1 COG:PH1352 KEGG:ns NR:ns ## COG: PH1352 COG1178 # Protein_GI_number: 14591158 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Pyrococcus horikoshii # 9 499 40 552 559 127 26.0 5e-29 MRRYKYPKIIINSIYLLLWILPLFWFVRDFWVMEEIQNSLDRSLWRTVVFTWKQSIYSSC LAFIVAIIPARYLAYHKNLLSKILESLLFIPFFFPVLSTIGIFSIVFNLPWIEKFSILYS MKAILIAHVFYNSPIFVKYIGESLRRIPKEIEESMILDGASSWKIFWKGQLPLMMPQVFK AFILCFTYCFLSFAILLSLGGIQYQSLEVEIASTLQGDFNFSKAMIYGLLQFLMLLSVNS LGILLPDYELKGSGYSKKMPYYTFLFSALYALFECGIVLASIVASFYNYFTGEFSLRAYQ IIFSSSFQEEYPIWRSLGNSFLVAGIAALGTVMIVYFLLRNYSRIIELLIFSNLGISGAF FAMTLYYIYVLYEVPFTLLLVFAYFMTGIPLAYSFLYQNVKNFPKDLQEMALLDGTSHWT YFWKIQFPILRPLFLLSFLQSFAIFLGEFTLAYTMQLGDIFPVVSLVNYSLLVDKKYLES SALSAVLLLLILLLFFLGECLKVRGEVHEEA >gi|224531371|gb|GG658181.1| GENE 210 219673 - 221175 2016 500 aa, chain + ## HITS:1 COG:FN0977 KEGG:ns NR:ns ## COG: FN0977 COG1492 # Protein_GI_number: 19704312 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Fusobacterium nucleatum # 3 490 2 493 496 544 56.0 1e-154 MRKHRSLMVVGTASGVGKSATVTALCRIFQKDGYRVCPFKSQNMALNSYVTKDGKEMGRA QAVQAEAIGLEPQAWMNPILLKPSNDKKIQVIIEGKSFGNLTGLEYHKYKQNFIPRLQEI YHRIEKHYDISVIEGAGSPAEINMLEEDISNFGMARIADAPVLLVADIDKGGVFASIYGT IMLLEEKDRRRIKGIIINKFRGNVEVLKPGLEKIETLTGVPVLGVMPYSDFDLEEEDSLS EKYKKKNSKKISIRIGVVQLRHLSNMTDFDALRRLEEVDLHFISKVEEIEGEDIIILPGS KNTIEDYLEIEKKGIVRKLREEVKKGTMIIGICGGFQMLGSRIEDPYEIESEAGSVEACG FLEMNTILEKDKNLLQYQGSFQFGKDCLEIMNGVSVKGYEIHQGVSMSRMKDAMGEDRII SLAKGRVWGSYLHGIFDNTEFLNRLLEEFRQKKNLEGSLQDYQEYREEQWEKLEQLYRKH LDISRIYKIMDEFEKGQEKK >gi|224531371|gb|GG658181.1| GENE 211 221172 - 222134 1069 320 aa, chain + ## HITS:1 COG:FN0975 KEGG:ns NR:ns ## COG: FN0975 COG1270 # Protein_GI_number: 19704310 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobD/CbiB # Organism: Fusobacterium nucleatum # 3 309 5 316 325 351 61.0 1e-96 MIFIFRYSFAYFLDLVFGDPYWFPHPVRFIGKWISSLEKILYRFSNKYYAGVFLWFATCA ITFIISFYLAKNEYLEIFFLYTSLATKSLAMEGKKVIRLLEEGDLDKAKKELSYLVSRDT KEMDEQQISMSTLETIAENTVDGVISPMFYAFIGSHFHVLGVSLALPFAMTYKAINTLDS MVGYQTEQYNLFGRFSAKMDDIANWLPARLAGGIFIPLAAGILGFSAKKSYQIFQRDGNK HASPNSGQSEAAYAGALGVQFGGKIFYFGEAYEKQKIGDALFPFSVEIVRRGVKLLYGTS FCACILFILLGGLYHGFTWR >gi|224531371|gb|GG658181.1| GENE 212 222115 - 223191 979 358 aa, chain + ## HITS:1 COG:FN0973 KEGG:ns NR:ns ## COG: FN0973 COG0079 # Protein_GI_number: 19704308 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Fusobacterium nucleatum # 2 353 3 355 357 427 60.0 1e-119 MDLHGGNIYRLQREGKEVLDYSSNINPLGVPQKFIDKAIQNFSSLSQYPDIDYIELREKI ANYNQVSRENILVGNGATEILFLYIRALRPKKTLLVGPCFAEYARVLKTVGSEICLFPLK EEENFILNVEALISEIQKEDYDLVLLCNPNNPTGKFIPLEDFKKIVTVIEKKGIQLFVDE AFIEFVESWKEKTVALLKSKSVFILRALTKFFAIPGLRLGYGMTWNADLFSRMQEEKEPW SVNVFANLAGLTMLEDEEYIRKTEDWIREEKKYFHQELSKISEIKVYETETNFILLQLLS KEAREFQAAMIEKGILVRDASNFPFLNEYYIRLAVKDRISNNRVLKAIQEVLKKGEEV >gi|224531371|gb|GG658181.1| GENE 213 223188 - 224507 1298 439 aa, chain + ## HITS:1 COG:FN0972 KEGG:ns NR:ns ## COG: FN0972 COG1797 # Protein_GI_number: 19704307 # Func_class: H Coenzyme transport and metabolism # Function: Cobyrinic acid a,c-diamide synthase # Organism: Fusobacterium nucleatum # 1 438 1 444 444 499 58.0 1e-141 MKAFLLAGTHSGVGKTTISMGLMKIFSRKYQVSPFKVGPDYIDPSFHAWVTGNFSYNLDY FMMGKQGVQYSFQSHQKDFSIVEGVMGLYDGIDYSLDNASAAHISRILDLPVILIVDAQG KSTSIAAQVLGYQKLDERVKIAGVIINQVNSEKSYIHCKEAIERYTKIPCLGYVKKEEQL RISSRHLGLLQANEVKDLDEKLETLADMIEQTIDIKRIEDIAERQEKSETIFHPLEKYQN YWRGRKIGIARDEAFRFYYQDNLESLEYLGFEVEYFSPIHDSQLPEKVDYLYFGGGYPEI FSEGLEKNKKMREEIQKFTGGIYAECGGFMYLGKEIIQLSEEKLQMCALLPVSTKMKNRL NISRFGYISLEENGIEIAKAHEFHYSDLENMEKDTRVLIARKIDGRSWSCIFEKEGRIYA GYPHIHFFNSIEFLKKIWR >gi|224531371|gb|GG658181.1| GENE 214 224516 - 225160 810 214 aa, chain + ## HITS:1 COG:FN0970 KEGG:ns NR:ns ## COG: FN0970 COG2082 # Protein_GI_number: 19704305 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin isomerase # Organism: Fusobacterium nucleatum # 1 214 4 217 219 353 84.0 2e-97 MAYIKVPGDIEKRSFEIIEEEMGEKIHQFSEQELPIVKRIIHTSADFEYGDLIEFQNNAI QSGIESLRKGCKIYCDTNMIVNGLSKPAMSKFACSAYCLVSDKEVIEEAKKEGLTRSIVG IRKAAKDKETKIFIIGNAPTALYQLKEMIERGEIERPALVIGVPVGFVGAAESKEAFKSL DVPYITINGRKGGSTIGVGILHGILYQIYKREGF >gi|224531371|gb|GG658181.1| GENE 215 225192 - 226316 1228 374 aa, chain + ## HITS:1 COG:FN0967 KEGG:ns NR:ns ## COG: FN0967 COG1903 # Protein_GI_number: 19704302 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiD # Organism: Fusobacterium nucleatum # 1 372 1 371 375 472 63.0 1e-133 MEDRELRNGYTTGSCAAAAVKAALMSLLYHISLQEVEVETPKGEELVIPILKVRRRGNFA SAAVQKYAGDDPDVTNGISICVKVFLQKEFPKIERAIIRGKCLIYGGRGVGLVTKKGLQV EVGKSAINPGPQKMIEKVVKDLLQETEDKVVICIYIPEGRAKASQTYNPKMGVLGGISVL GSTGIVKAMSEEALKASMYAELKVLRMDKRRKWVIFAFGNYGKAYCEKLGLDIEQMIIIS NFAGFMIESAVKLGFQKIILLGHIGKAIKLAGGIFHTHSRVADGRMEVMGANAFLYGLDS TIIRKILLSNTVEEACNYVSDSKFFNYLSNRIRDKIVEYSRKEGFESEVLLFSFEKGTLG QSDAFLKMVEECHE >gi|224531371|gb|GG658181.1| GENE 216 226309 - 226953 883 214 aa, chain + ## HITS:1 COG:FN0966 KEGG:ns NR:ns ## COG: FN0966 COG2241 # Protein_GI_number: 19704301 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 1 # Organism: Fusobacterium nucleatum # 1 209 14 224 229 198 47.0 7e-51 MSRVMVVSIGPGNVDYISQKAKERLEQSDFVLGSRRQIEDVRSICSVTTEFYVYKKITEI KEVVEKEQKKKISILVSGDSGYYSLVPYLKKVLREEFDIIPGLSSFQYLFSKIGENWQDF FIGSVHGRKLDYIQKFREENRGLVLLTDEENNPKQIAKNLWEAGFREVDIIVGENLSYQE ENISYYKIEDWKTMPEQFEMNVCICRKGEENAYL >gi|224531371|gb|GG658181.1| GENE 217 226940 - 227521 857 193 aa, chain + ## HITS:1 COG:FN0964 KEGG:ns NR:ns ## COG: FN0964 COG2242 # Protein_GI_number: 19704299 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 2 # Organism: Fusobacterium nucleatum # 1 186 1 186 189 288 78.0 4e-78 MHIYDKEFVQEELPMTKQEIRAISIAKLQLHPNSVLIDVGAGTGTIGIEAATYLSQGKVY AIEKEEKGLETIQKNAAKFHLENFILIHGKAPDVIPNIPYDRMFIGGSTGKLEEIIQHFM HYGIEKAILVINCITLETQSKAMEVLKSFGFRDIEVVQVQVSRGKKVGPYTMMYGENPIY IIKVVKGGNNIEQ >gi|224531371|gb|GG658181.1| GENE 218 227511 - 228233 961 240 aa, chain + ## HITS:1 COG:FN0959 KEGG:ns NR:ns ## COG: FN0959 COG2243 # Protein_GI_number: 19704294 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-2 methylase # Organism: Fusobacterium nucleatum # 1 238 9 246 248 367 81.0 1e-101 MNNKFYGIGVGVGDPEEITMKAVNVLKKLDVVILPEAKKDEGSVAYEIAKQYMKKDVEKV FVEFPMLKSLEDRINARKANAKIVEEYLEKGLNVGFLTIGDSMTYSTYVYLLEHLPEKYL VETVPGISSFVDMASRFNFPLMIGEESLKVVSLNSHTEIEKEIASSDNIVFMKVSRSFER LKQAIIATGNQENIIMVSNCGKENQVVTYDIEELEEEDIPYFTTLILKKGGMKAWKKFIS >gi|224531371|gb|GG658181.1| GENE 219 228212 - 228973 1017 253 aa, chain + ## HITS:1 COG:FN0957 KEGG:ns NR:ns ## COG: FN0957 COG2875 # Protein_GI_number: 19704292 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-4 methylase # Organism: Fusobacterium nucleatum # 2 253 6 257 257 417 86.0 1e-117 MEKVYFIGAGPGDPELITIKGQRIVKEADVIIYAGSLVPKQVIDCHKEGAEIYNSASMSL EEVIAVMVKAVQAEKKVARVHTGDPAIYGAHREQMDILDEYGVEYEVIPGVSSFLASAAA IKKEFTLPNVSQTVICTRIEGRTPVPERESLESLASHQASMAIFLSVHMIDRVVESLLKH YPKTTPVAIVQRATWEDQKIVLGTLETIEEKVREANINKTAQILVGNFLGKEYEKSKLYD KYFSHEFRQGIEK >gi|224531371|gb|GG658181.1| GENE 220 228989 - 230008 1182 339 aa, chain + ## HITS:1 COG:FN0952 KEGG:ns NR:ns ## COG: FN0952 COG2073 # Protein_GI_number: 19704287 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiG # Organism: Fusobacterium nucleatum # 1 326 1 322 337 389 67.0 1e-108 MKIAFWTVTRGAGNIAKEYAELLSSQVKYDEIQVYTLEKFSIKDTVQIQNFTDKLEEKFH SYDTHIFIMASGIVIRKISKLIKGKDIDPAVLLIDEGKHFVISLLSGHLGGANEITYKIA SLLNLIPIITTSSDITGKIAVDIISQKLNAELEDLKSAKEVTSLIVDGKTVDILLPKNVK VQKADKISKNPDGIIVVSNKRKLEMTRIFPKNLILGIGCKKDTREKEILEAIEASMEKHN LDMRSVKHIATVDIKKDELGLVQAAKTLEKELIIISREEIKKVQDKFEGSDFVEKNIGVR AVSEPVAYLSSSRKGQFLERKAKYQGITISIYEEEIESE >gi|224531371|gb|GG658181.1| GENE 221 230001 - 230744 1047 247 aa, chain + ## HITS:1 COG:FN0951 KEGG:ns NR:ns ## COG: FN0951 COG1010 # Protein_GI_number: 19704286 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-3B methylase # Organism: Fusobacterium nucleatum # 1 247 1 247 249 402 81.0 1e-112 MNKGKIYVVGIGPGNMEDISVRAYRVLKEVDVIAGYTTYVDLVREEFQEKEFCASGMKRE VERCQEVLELAKEGKNVALISSGDSGIYGMAGIMLEVAMESDIEVEVVPGITSTIAGAAL VGAPLMHDQALISLSDLLTDWEVIKRRIEAASQGDFVISLYNPKSKKRVSQIQEAREIML KYKKASTPVALLRHIGREEENYDLCTLENFLDYEIDMFTIVLIGNSNSYIKNGRMITPRG YQDKYQY >gi|224531371|gb|GG658181.1| GENE 222 230759 - 231514 929 251 aa, chain + ## HITS:1 COG:FN0950 KEGG:ns NR:ns ## COG: FN0950 COG2099 # Protein_GI_number: 19704285 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6x reductase # Organism: Fusobacterium nucleatum # 1 246 19 264 266 317 63.0 1e-86 MIWVIGGTKDSRDFLEEYTKYDSNVIVSTATEYGGKLLENLDITISTQKMNLDEMLQFLK DYSIQKIVDISHPYAYEVSKNAMLAAEMQGISYYRFERKEIELCAKKYSKFKNLKDLLHY VESLEGNILVTLGSNNVPSFQNLKNLSKIYFRILPKWDMVKRCEEHGILPKNIIAMQGPF TENMNIAMLEQLQVQYLITKQAGDTGGEREKISACDKKGIEVIYLEKEKLEYKNCYFELN TLIEALKIPSK >gi|224531371|gb|GG658181.1| GENE 223 231542 - 233806 1593 754 aa, chain - ## HITS:1 COG:FN1704_1 KEGG:ns NR:ns ## COG: FN1704_1 COG1752 # Protein_GI_number: 19705025 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Fusobacterium nucleatum # 8 345 5 341 375 204 36.0 5e-52 MFQKSYFYFFLFLFTSFVSFTDGWQNQEERIAALNQEITQLMKKKQEYEVLKQKIRSEVT KENPKIALVLSGGGAKGAAHIGVLKVLEKYQIPVDIIIGTSVGSIVGGMYAIGYSPEEIE TLILNLNFGKLLTDSKDKTLKTIESHLTNEKYPLHFNMDKEFNISTPMGILNGQNIYFQL KDIFSPAENIHNFDEFPISYRAITTNLQNGKEEIIKEGNLALASFQSMAIPAFISPVEHN GEFFVDGGVVNNFPVDVAIQMGADIIIGVDISADDNKISNDSNIISILDKISSYNGNRST KLHRQLANILIVPNVKQHNTVDFSNLSDLIQEGEIAAEKHANILQKFTDSSEFQKKKMKK LQQKSFYIEKIKCHGNEILSLEEIVQLAPPSKTKRYSKEQLEEWARKIYANTYVDKVEYH IKDNILYFNIHEKKEIILNAGLAYHTHYGGSFNVAANIPNFFDNITTHLGLKAEISEFPK LDIHNSFQYRIQRQTFYGQGRIFFQKSPFFLYEAGDNISTYATMDIGTSLTLGTELSPSL MLQYELSHHNINHNYVKGKRKIKEIEQNYKILKNTLKVTKDTLNRNVFSNKGYKLEGEIS NMNSTDNHKISASSLKGTAEIYIPITNTNLTLSSALSGGKISGRNIPKTEYIKIGGSRNF QNNVEFLGVPISSIHSNHFWLWNFGLQYKLFENLNFIGKYNHIEYSNEKNEKQKEDGYGF GLGFDIFYTPITFQISKRRHYRYPVWELSLGYAF >gi|224531371|gb|GG658181.1| GENE 224 233908 - 235806 2171 632 aa, chain + ## HITS:1 COG:FN2102 KEGG:ns NR:ns ## COG: FN2102 COG0488 # Protein_GI_number: 19705392 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Fusobacterium nucleatum # 1 631 1 631 631 787 69.0 0 MALVQVSNLYMGFSGSCLFRDINFSIDEKDKIALIGMNGAGKTTLVKILLGLEYSEVDPR TQQRGNISTKNGIKIGYLSQNPKLDLENTVFEEMMTVFSELQKIHQRMQEINVALANNLG DSQELMNELGEIAAYYEQHEGYAVEYRVKQILLGLSLKENLWEQKIKNLSGGQLSRVALG KILLEEPDLLVLDEPTNHLDLNSIAWLEKTLKSYPKAIFLVSHDVYFLDNVANRIYEMEG KTLKAYSGNYTDFVIQKEAYLSGAVKAYEKEQEKIQKMEEFIRRYKAGVKSKQARGREKI LNRMDKMENPVITTKKMKLKFDTDLQSVDLVLELKKLCKSFSGKKLFENLDLKIYRGERV GIIGKNGTGKSTLLKIVNSLEKESAGSFSVGEKVKIGYYDQNHQGLGLNNNILEELMYHF TLSEEEARNICGAFLFREDDIYKKISSLSGGEKARVAFMKLMLEKPNFLILDEPTNHLDL YSREILMNALEEYSGTLLVVSHDRNFLDQVVRKIYRIEENGFSVFHGDYSSYLEEEKEVK EKSNEGNLSFEEQKKQRNRVANLERKTKKLEEEIARLEEKKSICEKEYEEAGRKNDLDAL LDLQRKLEEWDEKIFQKLEAWEELESEKNSLK >gi|224531371|gb|GG658181.1| GENE 225 235950 - 236318 610 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237737534|ref|ZP_04568015.1| SSU ribosomal protein S12P [Fusobacterium mortiferum ATCC 9817] # 1 122 1 122 122 239 96 9e-62 MPTLSQLVKNGRDTLVEKKKSPALHGNPQRRGVCVRVYTTTPKKPNSALRKVARVKLTNG IEVTCYIPGEGHNLQEHSIVLVRGGRTKDLPGVRYKIIRGALDTAGVAKRKQARSKYGAK KA >gi|224531371|gb|GG658181.1| GENE 226 236339 - 236809 772 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237737535|ref|ZP_04568016.1| SSU ribosomal protein S7P [Fusobacterium mortiferum ATCC 9817] # 1 156 1 156 156 301 98 1e-80 MSRRRAAVKRDVLPDSRYSDKVVTKVINSIMLDGKKAIAEGIFYGAMDIIKEKTGQEGYD VFKQALENIKPQIEVRSRRIGGATYQVPVEVKADRQQTLAIRWLTLYTRQRKEYGMIEKL AAELIAAANNEGATIKKKEDTYKMAEANRAFAHYKI >gi|224531371|gb|GG658181.1| GENE 227 236836 - 238917 2729 693 aa, chain + ## HITS:1 COG:FN1556 KEGG:ns NR:ns ## COG: FN1556 COG0480 # Protein_GI_number: 19704888 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 693 1 693 693 1217 88.0 0 MARKVSLDMTRNVGIMAHIDAGKTTTTERILFFTGVERKIGEVHEGQATMDWMEQEQERG ITITSAATTCFWREHRVNIIDTPGHVDFTVEVERSLRVLDGAVAVFSAVDGVQPQSETVW RQADKYQVPRIAFFNKMDRIGANFEMCVSDIREKLGSNPVPIQLPIGAEDQFEGIVDLIE MKEIVWGADSDNGQVFEVREVRESMKEAADEARQYMLESVVETSDELMEKFFGGEEITVE EIRSALRVATIANTIVPVTCGTAFKNKGVQPLLDAIVDYMPAPTDVAMVAGTDPKDPEKE VDRQMSDEAPFAALAFKVMTDPFVGRLTFFRVYAGIVEKGSYVLNSTKGKKERMGRLLQM HANKREEIDVVYCGDIAAAVGLKDTTTGDTLCAEDAPIVLEKMEFPEPVISVAVEPKTKA DQEKMGIALSKLAEEDPTFRVRTDEETGQTIISGMGELHLEIIVDRMKREFKVESNVGQP QVAYRETITKSVDQEVKYAKQSGGRGQYGHVKVTIEPNPGKEFEFINKITGGVIPKEYIP AVEKGCREALESGVVAGYPMVDVKVTLYDGSYHEVDSSEMAFKIAGSMALKQGAGKAAAV ILEPVFKVEVTTPEEYMGDIIGDLNSRRGMVSGMIDRNGAKIITAKVPLSEMFGYATDLR SKSQGRATYSWEFSEYIQVPASIQKAIQEERGK >gi|224531371|gb|GG658181.1| GENE 228 240334 - 241503 852 389 aa, chain + ## HITS:1 COG:FN1497 KEGG:ns NR:ns ## COG: FN1497 COG0477 # Protein_GI_number: 19704829 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Fusobacterium nucleatum # 18 387 2 371 374 298 54.0 1e-80 MKNIIALVWGESSLKISSILYSSVITAYLLQIGLTNYKIGILWSIILFVQMICDYPTGGF ADKYGRLKIFMIGMIFMGTSIFMMVSGNGFLLYLGAIILGIGESQVSGTLFPWFVHTLKE KGVSEEERKESILKVNAQSQYITNFLGILIGFLIFPFDLKYKTILIIAGCVYILNGLLIY LFFKDNRSDERDLLKIGKRSIAIFCQDQKLWLYGLAMTLHYIFYSIHLFIWQPKANALGI LEGKLAFVQSIFLIGMALSGFIVKHINIKTYFIYFLASILIPISLVYIYDSSNLKAYLSF MFILSLSNGLIVPLIFGSMHFFIPDDVRSSVVSLMSSLSSILLVFFQAIIGKILDQHNFW YLSFFCFFIGILYICCIYFIYKWRIRNEK >gi|224531371|gb|GG658181.1| GENE 229 241533 - 242159 485 208 aa, chain - ## HITS:1 COG:FN0314 KEGG:ns NR:ns ## COG: FN0314 COG4122 # Protein_GI_number: 19703659 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Fusobacterium nucleatum # 1 206 1 213 215 205 54.0 6e-53 MLEILNNINQYLYHKIEETDPILLELEAYAKEHKVPIITKEVAEYLKMMLQIKKCHNALE IGTAIGYSGIYIARQITGQLTTIEIDEERFEEAKVNFKKADISNVVQILGDATEKIKEIQ ENFDFIFIDASKGQYQKFFEDSYPKLNQGGLIFIDNILFRGYVCEENYPKRFKTLVKKLD EFISYLYKSHNFVLLPFGDGIGIVRKSK >gi|224531371|gb|GG658181.1| GENE 230 242166 - 243059 930 297 aa, chain - ## HITS:1 COG:FN1038 KEGG:ns NR:ns ## COG: FN1038 COG0697 # Protein_GI_number: 19704373 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 6 294 8 297 303 285 56.0 1e-76 MNQFLLGNGALLLTSFIWGSAFVAQVTGMDLIGPFTFSASRCFLSTLFVLALIFLQKEKD DTKMKDLLFGGIACGLFLFLGSSCQQVGLQYTTAGKTSFITSLYIVLVPLLGIFFKKKVN LFTWMAVFLGTVGLYLLAMSGLTEGANINKGDFFVFLGSFFWAGHILVIDYFTKKVNPIK LSCLQFAVTTCLAASLALSIETPTLPNIFASWKSIAYAGILSGGIAYTLQIVGQKHTTNT TLASLILSLESVFGAIAGFIVLHERLKPSEILGCIIMFIAILVAQIPSDLFQKKKGN >gi|224531371|gb|GG658181.1| GENE 231 243084 - 244421 1997 445 aa, chain - ## HITS:1 COG:FN1480 KEGG:ns NR:ns ## COG: FN1480 COG2239 # Protein_GI_number: 19704812 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Fusobacterium nucleatum # 1 443 7 449 449 545 65.0 1e-154 MENILEYLESNRLSELKNILNEENPVDIAEHFENLSKEKTILVFRILQKDTASEVFSYLS SEKQEEIIESITDEELKRILDELFLDDTVDLIEEMPANIVDKILKNSSSETRKLINQFLK YPENSAGGVMTVEYVSFKNDMTIGQALSYFKNVGMNKEDTDICFVIDKTRHFLGIITLKQ LIIVEDDVPLVDAMDTSIPTVNTLDDQEEVADLFRKYDYNSIPVVDNENRLVGLITIDDV VDVIDQENTEDFHIMAAMEPSNEEYLRESIFSLAKHRIIWLLVLMISATATGIIIRKYES VLQSVVTLAIFIPMLMDTGGNAGSQSATLIIRGLALGEIELKDIGKIVWKEFRVSILVGI VLALVNFLRIYYIDQVGFTIAMVVCFSLLITVIIAKVVGGSLPIIAKALKLDPAIMASPL ITTIVDACALAIYFQLSSHFLNLVS >gi|224531371|gb|GG658181.1| GENE 232 244501 - 244566 68 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNVCYNEWKVGKEKLGGKYGN >gi|224531371|gb|GG658181.1| GENE 233 244556 - 245878 1327 440 aa, chain + ## HITS:1 COG:FN0313 KEGG:ns NR:ns ## COG: FN0313 COG0144 # Protein_GI_number: 19703658 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Fusobacterium nucleatum # 1 430 1 431 435 463 57.0 1e-130 MAIKNEIIALLQEVDQGKYSNIALNELFHRKVFKKGEKNFITEVFYGVIRNKIYLDYMIS QKVKEVKKDWLQQLFRLSFYQIRFMKSDDKGVIWEGVELAKKKYGVSVSRFVNGVLRNFQ RSFIEEEENLKREGREEVLFSYPKWFFEQIKKESPERYIEILKSLKRTPLLSVRVNLLKY SCEEFEEYLRKEEIEIIKKVETIYYTKAGNLLNSSEFQEGKIIVQDAASYLAAKNLGAKP GEIVLDTCSAPGGKTSVLAEAMKNEGQILSLDIHTHKIKLIQENCKKLGITIVQAVKLDA RHLSLQGKKFDRILVDAPCSGYGVLAKKPEGLYNKKEENIKELVTLQREILMAAAEVLKV GGEMVYSTCTILPAENQENAKWFLETHPNFESIQLQIPENVAGTYDDCGGFSIDYQEEVV DSFYMIKWRKNLDKALENVL >gi|224531371|gb|GG658181.1| GENE 234 246172 - 246741 831 189 aa, chain + ## HITS:1 COG:BS_maf KEGG:ns NR:ns ## COG: BS_maf COG0424 # Protein_GI_number: 16079857 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Bacillus subtilis # 4 186 5 185 189 171 46.0 6e-43 METMILASKSPRRKEILEMLAWNFEVCSQETEEIFEKGKSIEENMQKIALEKAKAVVNLH PNSLILSCDTMVVVENTILGKPKNKKEAKAMLQALSGKHSYVYSAVALLDRKRDLEETFV EKTKIYFYQMSEKEIDDYIATGEPMDKAGAYAIQGKASVFIEKIEGDYWNVVGLPISRVY QKLKEWGYL >gi|224531371|gb|GG658181.1| GENE 235 246738 - 247259 401 173 aa, chain + ## HITS:1 COG:no KEGG:FN1061 NR:ns ## KEGG: FN1061 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 167 5 169 184 103 41.0 3e-21 MRIEYLGLVISFFCFLMGIKFPDWDFKWKLRHRSIITHSPLFSTILVFLYYTKLEERLFS YVIASFSFGIAIHMIFDLFPHGWGSGALLKIPVFKITCSPKNSQYFFLFTIILDFFYVLL FLERKEEYFVYILFGFLYMLSRIPYEKKFWRPFGLYFLLIALGALNFVDIALK >gi|224531371|gb|GG658181.1| GENE 236 247304 - 248116 1239 270 aa, chain + ## HITS:1 COG:FN0294 KEGG:ns NR:ns ## COG: FN0294 COG3959 # Protein_GI_number: 19703639 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Fusobacterium nucleatum # 1 270 1 270 270 459 81.0 1e-129 MKDLKSLESIAKNIRRSIVSMICEAKSGHPGGSLSIVDILTALYYDEMNIDPTKPKMEGR DRFVLSKGHAAPALYAVLAEKGYFPKEELMTLRKFGSHLQGHPDMKKVPGVEISTGSLGQ GLSVANGMALNAKIFKEDYRVYVMIGDGELQEGQIWEAAMTAAHYKLDNVCAFVDSNNLQ IDGNVDAVMGVEPLDKKWEAFGWNVLSIDGHNFEEIFSALEAAKACKGKPTLILAKTVKG KGVSFMENVCGFHGTAPTAEERDKALAELA >gi|224531371|gb|GG658181.1| GENE 237 248136 - 249065 1458 309 aa, chain + ## HITS:1 COG:FN0295 KEGG:ns NR:ns ## COG: FN0295 COG3958 # Protein_GI_number: 19703640 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Fusobacterium nucleatum # 2 308 3 309 309 515 83.0 1e-146 MKKSTRQAYGEALVELGQQNKNIVVLDADLSKSTKTDLFKKAFPDRHINVGIAEADLIGT AAGFATCGKIPFASSFAMFAAGRAFEQIRNTVAYPKLNVKIAPSHAGVSVGEDGGSHQSV EDMAIMRSIPGMVVLCPCDAVETKKMIFAAAEYEGPVYIRMGRLDVETVLEDNYEFQIGL ANTLREGTDVSIVSCGLMTQEALKAADILAEEGISVRVINSGSVKPLDGETILKAAQETK FIVTAEEHSVIGGLGAAVSEFLSETHPTLVKKVGIYDAFGQSGKGQELLEKYELTADKLV AVIRENLKK >gi|224531371|gb|GG658181.1| GENE 238 249177 - 250022 1059 281 aa, chain + ## HITS:1 COG:FN0265 KEGG:ns NR:ns ## COG: FN0265 COG2177 # Protein_GI_number: 19703610 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Fusobacterium nucleatum # 1 273 1 273 308 190 39.0 2e-48 MNKVFGLGKENLKYVSRLKRRIFYCVISLVIILNIFISAGLNLRKLSEVNEGKAFFVVDL QHNLENSKKEALEKMFWKMEGVRKVQYLSKEKSFQELQQELNISIPMKDNPLTDSIVVYL SKTSNMEKIREKLEDNEAVKEVFQDKGYLEHIQKNNGMYQTLTYVSSFGAILIFGLLIFL FKAASALDFFNCINAIRDDNYNLKRSKRRNLIPFTLSTLAGELIFLNIYVYVRKIFIAYK SDFLLLAYWDTFLWHLLALLIINLVIWILPITILGIDGEEE >gi|224531371|gb|GG658181.1| GENE 239 250019 - 251122 1317 367 aa, chain + ## HITS:1 COG:FN0266 KEGG:ns NR:ns ## COG: FN0266 COG4942 # Protein_GI_number: 19703611 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Fusobacterium nucleatum # 19 367 20 403 403 267 47.0 3e-71 MKKYIVILLSFCFFHLSFADQVKDMKKKIQNIEKQIQVKNTRIKKIDVEKSQIAKKIEQL KHEIEENSRKRLEMQNEIVEVTKKIEYGSKNLEISNQEFENKKLQYDAKMIAWSHYLIGH AGDLEDKPLVTKNFKTLLYSDLQRMGKIQTVQGDIKTVKEQIEAERAKLAKLQSGLAANI AEGDRKQKQQNALIAQLNQEKKEHQGSIQKLSKEKARIARQIEQIIRSRVKVDKKIVKKT QAYSKIGKTMKPLDGPIVVHYGQMKAGQVSSNGIEIKANMGAPVKAATSGTVIYASNFQG LGKVIMIDYGYNTIGVYGNLISLKAGLNQKVSKGQVIGILGVSSNGEPHLYYEVRFNLHP VDPMGTF >gi|224531371|gb|GG658181.1| GENE 240 251144 - 251944 907 266 aa, chain + ## HITS:1 COG:FN0267 KEGG:ns NR:ns ## COG: FN0267 COG0061 # Protein_GI_number: 19703612 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Fusobacterium nucleatum # 4 266 3 267 267 237 46.0 2e-62 MKKKVYLYYNDGKEIAQELYEKSLPFFQERGIEIMTKERENEADFYVVIGGDGTLLTAFK KFARVDIPVIAINAGHLGFLTEIKKEDMFQEYQNFLEGKSQTQKRHFLKVKIGGKTYRAL NEVVITRESVVKNMVKLKVFSEDSFVNHYKGDGLIIATPTGSTAYSLSAGGPIVGVPMKV YILTPIAPHNLNTRPLVMDGSSPLSVSLIEEEKAYCIIDGNNEKLLDGNDRVEISYSEET LHLVVPKNRDYYSVIREKLKWGDNLC >gi|224531371|gb|GG658181.1| GENE 241 251938 - 253605 2563 555 aa, chain + ## HITS:1 COG:FN0268 KEGG:ns NR:ns ## COG: FN0268 COG0497 # Protein_GI_number: 19703613 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Fusobacterium nucleatum # 1 552 6 557 558 493 54.0 1e-139 MLRELKIENLAIIEELDLEFQEGFVVLTGETGAGKSIILSGINLLIGEKASVDMIRDGEN SLLAQGVFDITKKQEQDLQKFGISIEDGEVVVRRQLDRNGKSKIYVNSIRVNVTELREIM SSLVDIVGQHSHQMLLNKNNHQKLLDHFLEEKGQIVKKEVESLAKEYDILDRRIKEIEKN RQEALEKKEFYEYQLQEIEKLQLKEGEDEKLEEEYKKIFHAGKIKEKLYNTLYALRDGEY NVSSLLHQSKKNVENLGKYGKEFQEAYESLENISYQLDDCLGVLDELQDSIEVEEGNLDE ISKRLDEINRIKNKYNGSIKDILIFRDSIAEKIDFLDENNLEVKTLIEKRKQIAGNYQEK ALQLHNERLKVARFIEKELEQELQFLKMEEARLHVQFTEKEGISSEGMEEIEFFISTNLG QSMKPLAKIASGGEVSRIMLAIKVLFSRVDNIPILIFDEIDVGVGGETVKKIGDKLQEIG QRAQVISITHSPAIAARAAQQFYIEKDISGEKTLSSVTELQEEERVREIARMLSGEQVTE SVLELAREMLQEGRL >gi|224531371|gb|GG658181.1| GENE 242 253602 - 254315 618 237 aa, chain + ## HITS:1 COG:FN0269 KEGG:ns NR:ns ## COG: FN0269 COG0582 # Protein_GI_number: 19703614 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Fusobacterium nucleatum # 15 237 8 241 241 71 27.0 2e-12 MKEVEEYLRQNVAQEKTRRIYLRDLEQVREFLEKDFLEVEEADLQKYFDFCQESLKESSL RRKQSVLRKFYQYLLTERKIQKNPFPVISTTYKKEEKQAKERLSQEEYELLLEELPEEMK VLTKMLWETEAKILDLFDVRVQSLQEYDYKKIVGKRQGKVYSYEIPEFLRGDFQKMVEGK QPEEKVFRGNRQQYDKELKRKNEAWKASQIKKESWKSGKIEIEKIREHYFEIGIGDK >gi|224531371|gb|GG658181.1| GENE 243 254316 - 255206 1186 296 aa, chain + ## HITS:1 COG:FN0270 KEGG:ns NR:ns ## COG: FN0270 COG1159 # Protein_GI_number: 19703615 # Func_class: R General function prediction only # Function: GTPase # Organism: Fusobacterium nucleatum # 1 295 1 296 296 408 77.0 1e-114 MKAGFIAVVGRPNVGKSTLMNKLVSEKVAIVSDKAGTTRDNIKGILNFQGKQYIFIDTPG IHKPKHLLGEYMTEIAIRSLKDADAILFLLDGTQEISTGDFFVWEKIQSSKKPVVVLVNK IDKISDEEIEEKKLEIQEKLGEGFKIVFASGMYSFGLPRLLDALEEYLEEGIQYYPEDMY TDMSIYRMITEIVREKILEKTRDEIPHSVAIEILNVAERKEAKDKFDINIYVERSSQKGI LIGKDGKMLKEIGSEARKEIENLLERKIYLTLWVKVKDDWRKKKPFLKELGYSYEE >gi|224531371|gb|GG658181.1| GENE 244 255284 - 256108 1215 274 aa, chain + ## HITS:1 COG:FN2098 KEGG:ns NR:ns ## COG: FN2098 COG0489 # Protein_GI_number: 19705388 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Fusobacterium nucleatum # 32 274 15 255 257 280 58.0 2e-75 MSGCSTCPSASGCSTEKKVTCGEKNTNPFNKIKKVIGVMSGKGGVGKSTVTVLLAKELQA RGYKVGILDGDITGPSIPRLTGIREERAEAVSETEIFPVTTKEGIKVISLNLLLEDENEP VVWRGPVVGNVVKQFWNDVIWGELDFLLIDMPPGTGDVALTVMQSLPLDGVVMVSVPQDM VSMIVAKAVNMTKKMNVPVLGLVENMSYIVCPGCETIIHFHDNNGGKDSLKEMNLNLLGE LPMKQEIAKMTQGDDSGIGMIFKEIADRFLKVVK >gi|224531371|gb|GG658181.1| GENE 245 256156 - 256932 1172 258 aa, chain + ## HITS:1 COG:FN1020 KEGG:ns NR:ns ## COG: FN1020 COG1024 # Protein_GI_number: 19704355 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Fusobacterium nucleatum # 1 258 1 258 258 355 69.0 5e-98 MEFVKYQQEGFVGVVTIDRPKALNALNSQVLEELAQTFDAVDLQNTRVIVLTGAGEKSFV AGADIGEMSSLSKAEGEAFGKKGNAVFRKIETFPIPVIAAINGFALGGGCEIAMSCDIRI CSDNALFGQPEVGLGITPGFGGTQRLARLIGQGKAKEVIYACKNMKAEEAFSVGLVNAVY PIADLMPEAMKLAAKIAKNAPIAVRMCKEAINGGYDLAMDDAVALEAKVFGQCFETEDQR EGMKAFLEKRKVEGFKNK >gi|224531371|gb|GG658181.1| GENE 246 256978 - 257811 1278 277 aa, chain + ## HITS:1 COG:FN1019 KEGG:ns NR:ns ## COG: FN1019 COG1250 # Protein_GI_number: 19704354 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Fusobacterium nucleatum # 1 277 1 277 279 452 83.0 1e-127 MKVGVIGAGTMGSGIAQAFAQVEGYEVVLCDINDEFAARGKEKLKKGFDKRIAKGKMEQA AADAILSKITTGTKEKCGDCDLIIEAAIENMEIKKQTFKELQAICKPEAMFATNTSSLSI TEIGAGLDRPVIGMHFFNPAPVMKLVEVIAGLNTPAEMVDKIKKISEEIGKVPVQVEEAA GFVVNRILIPMINEAVGIYADGVASVEGIDSAMKLGANHPMGPLALGDLIGLDVCLAIME VLYREFGDTKYRPHPLLRKMVRGGKLGMKSGEGFYKY >gi|224531371|gb|GG658181.1| GENE 247 257844 - 258752 1122 302 aa, chain - ## HITS:1 COG:FN1016 KEGG:ns NR:ns ## COG: FN1016 COG1560 # Protein_GI_number: 19704351 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Fusobacterium nucleatum # 74 290 1 217 226 234 54.0 2e-61 MNYRIQFYLLLFFRRILLWLPESFRFSFGNFLGKAAYHLIKSRRQTALWNLQLAFPEKTE QERKEIAIHSYQIMVKYFLSTLWYESYLENRVTIFNRKAIELAYAKGKGVMAAVMHMGNM EASVKAGEGFPIVTVAKDQRNPYIENFIIESRKKNLKLDLLTKSRQTVRQLQSYHKKEEK YIYALFSDHRDKGAHVNFFGLETVAPTGAVSLAYKYNMPLLLVYSCLEKDNSASIHISEE IPLIRTENPKQDVLENTQALIYRMEEIIRQYPEQWMWFHDRWNLYRDFKKEGLLPPFLQG KK >gi|224531371|gb|GG658181.1| GENE 248 258891 - 259607 1133 238 aa, chain + ## HITS:1 COG:FN1015 KEGG:ns NR:ns ## COG: FN1015 COG0775 # Protein_GI_number: 19704350 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Fusobacterium nucleatum # 1 229 5 233 237 234 53.0 1e-61 MKIGIMGAMHEEIVELQQDLELGYHIEKIGDLDFMIGKLYGREVVLVEGGIGKVNAALCA SLLSHHFQVDALLFTGVAGALHSDINIADIVLGTELLEHDFDVTAFGYPLGKIPRMDVHA FPANPKLLEVAKKVGTRIFGEKHIFEGRILSGDQFVADLQKIQFLQETFDGYCTEMEGAA VAHVCHILGTPFLIIRSISDKANHDAQMDYPEFVKIAAKNSKKMIEGMLKETIWEESL >gi|224531371|gb|GG658181.1| GENE 249 259604 - 260833 1579 409 aa, chain + ## HITS:1 COG:FN1014 KEGG:ns NR:ns ## COG: FN1014 COG0285 # Protein_GI_number: 19704349 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Fusobacterium nucleatum # 3 401 13 411 415 498 62.0 1e-141 MMKIYSHSMFGIKLGLQNMERLCEKLGHPERAYKIIHIAGTNGKGSTATTLERILLEAGY QVGKYTSPHILKFNERIIANGKQISDEEIEKYYYQVEKIMEEEKIDATFFEITTAMMFSY FRDKKLDYVVLETGMGGRLDATNVSQAELCIITNVSLDHTEYLGDSIYKIAKEKAGIIKN CPKVIVADQQEEFLQAILEEKAEVINVLNKYADATYQLDFEKFMTEIKIEGKNYHFSLFG DYQYHNFLCAYEAAKQLGISEEIIQRAAEKVVWECRFEIAARQPLVILDGAHNPDGVREL VKIVKQHYHKTEVAILTSILKDKDIKPMLEMLAEVSDDIILTSLADNPRGSTAKELFDLA NNPDIFSMEEDMKQAYKLLIGKNRKLNIICGSFYTLIKWKEEVQSNETN >gi|224531371|gb|GG658181.1| GENE 250 260820 - 261431 821 203 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466856|ref|ZP_05631167.1| ## NR: gi|257466856|ref|ZP_05631167.1| hypothetical protein FgonA2_05400 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 19 203 19 203 203 194 100.0 3e-48 MKLIRLLNILLLLVFLFFMYHIYQIYTEEGIGRAKENAKIEKEVEDSFQVRKKNFYLTQK DAPLRPKVEEVVEELNTEENKQEILKEQLEEKIENTIQNTLDTFGNKVEPTVKKEEKVAK KIEKKVEKTAKKVEKKVVEKVKKEEKIEAPKAVIIEKKEKKEKPVEQPKAPAPVVTEIKE VKLPKPAAGEIREIEGTFDASSL >gi|224531371|gb|GG658181.1| GENE 251 261448 - 263361 2536 637 aa, chain + ## HITS:1 COG:FN1012 KEGG:ns NR:ns ## COG: FN1012 COG1493 # Protein_GI_number: 19704347 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Fusobacterium nucleatum # 4 619 2 613 615 689 57.0 0 MESYRSISIREISEAMNLTVLNEGNLDLKVSRPNLYQVGYELTGFLATGSEELTDYINVY GQEESYYLEKLSSETKEEILSKYFALPFPALVISSAAIVSEEVLAIAKRYNKNVLRSQYL ISETIRELKFYLLRQLWIEEVYEDYALMEIHGIGVLLTGYEDAKIGSMIELVGRGHRLIT DRNVLIRRLGENDVEGMNMLEKTTEKDHFFIENHRGRQIDVTSHFGVKSTRKKKKINIVI HLEEWDEKKFYDRLGLDVEYEVFVGEKIQKITLPVRKGRNLAVIIETAALSYRLRRMGLN SAEYFLSESQRIIRENQEKRGLNMGNKTMAMPVRKLKNEFDLKIIYGEELIDTTYVETTN VFRPSLALAGHYELYQNSENRGVQVFSTVEFKFLESLSEEERVENLKRYLSYDFPLIVLT TGLHAPEYFMRLVKESKHILCRSPFRKPSQLIANFNNYLETYFAPTLSLHGVFVELYGFG VLLIGKSGIGKSETALELIHRGHRLVADDFVKFSESPTGDIIGKSARIPYFMEIRGLGII DIKTLYGLGAVRIAKRLDLIIELKEQDEDSYITSVGGQAEKQEILGKSFRKETIYISSGR NAAVMVEILVMNTMAKILGYNAEKAFDFGMKLLNSED >gi|224531371|gb|GG658181.1| GENE 252 263375 - 264679 1797 434 aa, chain + ## HITS:1 COG:SA1938 KEGG:ns NR:ns ## COG: SA1938 COG0213 # Protein_GI_number: 15927710 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Staphylococcus aureus N315 # 1 400 14 413 446 413 56.0 1e-115 MRFVDIIEKKKQKKSLSKEEIKIWIQGLVEGSIPDYQSSALLMAIVLNGMTQEETTNLAE AMVLSGEQIDLSNISGVKVDKHSTGGVGDKTTLVLGPLVASCGLKVAKMSGRGLGHTGGT LDKLESIPGFDCFLTTENFVRQVEKIGIALVGQTADLVPADKKLYALRDVTATVESIPLI ASSIMSKKLAFGSDTILLDVKFGEGAFMKTIEEGKELASSMIKIGKSLGRDTRAILTEMD QPLGNTIGNALEVIEAIETLQGKGPEDFTELCITSAELMLLQGKIVSTKEEAREMLWKKI DSGEAFEKFCEVVREQKGDVQALHDISLFPQAKNRTELKSQKTGYVVKIHSQNLGFLSME IGAGREKKEDDINPAVGLKLHKKYGDFVEVGESLCAIYHDNPLEENWKTRLLESFEIQEG KPKKKNMIEAIIEE >gi|224531371|gb|GG658181.1| GENE 253 264888 - 265781 1022 297 aa, chain + ## HITS:1 COG:PAB2381 KEGG:ns NR:ns ## COG: PAB2381 COG0697 # Protein_GI_number: 14521649 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pyrococcus abyssi # 4 281 5 270 280 129 33.0 7e-30 MSNRGYKILLFMTAAIWGGGFPITKIALNYGTSPNAILAVRFLAASVILFAYLCYKKEKI TRSEVKLGLFTGVFLSLGFSFQTVGLSYTTASKNAFLTGTYVVLTPFFAWLFTRKMPKKQ IYFSCFLSLLGIFLLSWSGENVSMQFGDVLSLLCAVFYAIQISYMSAKIGEKNPLHVNFF QMLSAGILTLIYNIVLEGGSVSSFPENKVQLFSVGFLVVFNTLLAYSAQTLAQKYVESSL VCLILSTEILFGAFISFLFLGEILSFQSLLGGFLMFLSIFLAEFDWKKKSDKESITK >gi|224531371|gb|GG658181.1| GENE 254 265890 - 267374 2054 494 aa, chain + ## HITS:1 COG:BH0844_1 KEGG:ns NR:ns ## COG: BH0844_1 COG1263 # Protein_GI_number: 15613407 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus halodurans # 2 406 4 416 424 452 57.0 1e-126 MKLFSEVQKIGKALMTPIAILPAAGLLLAFGNKLNLPIMEQAGQIIFSNLPLLFAIGAAV GLVGGDGVAGLAAIVAILIMNTTMGLVAGAAQGIANGDPSFAMVMGVPTLQTGVFGGLIA AIIAAICYNKFYKTELPAFLGFFAGKRLVPIMTAVFAFIIGLLMPWIWQPVQHGLAALSY LANETNTNVSTFIFGVIERALIPFGLHHIFYAPFWYQFGEYTTKAGEVINGDQAIWFAML KDGIHNFSAETYQGAGKFLTGKFVFMMFGLPGAALAMYQEARPENKKLVGGILFSAALTS FLTGITEPIEFTFIFVAPVLYAIHCVFAGLSFMLMNILGVRIGMTFSGGFIDYIVFGVLP GTSGFETKWYFVIVVGLIISIIYYLGFRFFIRKFNLATPGREVVTEATEKKEVSEDELAN GVLVALGGKENLISLDACITRLRVEVKDTAKVEDAALKALGATGVLKVGENGVQAIFGAK AQFICNDLKKMTGI >gi|224531371|gb|GG658181.1| GENE 255 267498 - 268580 1227 360 aa, chain + ## HITS:1 COG:FN0491 KEGG:ns NR:ns ## COG: FN0491 COG0787 # Protein_GI_number: 19703826 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Fusobacterium nucleatum # 5 358 4 357 359 290 45.0 3e-78 MVEHSFYLEVNREAILHNINVLRKWKRKDIIPVIKANAYGHGMLEMAKTCVQAGVTQVAV ARYEEAKKILEDSYFQSLSKECSFQILIFESIGDFSLLDHFPRMDISINSLEELEKALEY HISPKKMQVKIDFSFGRNGIQEKDLPFFIKKVKEENLTFKGIFSHLFSCSYEDGLLCIKK FSSLVQEMGKERFDRIHLQNSAASYNYDCDIVTDIRVGMLTYGLQEPGYFHEELQRAFCL KGKIDSIRCLENMKYLAYEGKEDVGMKSAKWAAKIKIGYADGFGKENENGSCIIQRKEYR IAEVTMDNTFLEVDERVKVGDEVLLFYNPTKTKQETGKEIHEHLTGLTNRLPRKWIGEIK >gi|224531371|gb|GG658181.1| GENE 256 268577 - 269320 580 247 aa, chain + ## HITS:1 COG:FN0490 KEGG:ns NR:ns ## COG: FN0490 COG2035 # Protein_GI_number: 19703825 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 1 245 1 260 260 180 48.0 2e-45 MIENIIKGLAVGVANIIPGVSGGTVAVLLGIYERLTDAMGNFFLVSFQKKKEYFIFLFQI MIGAVLGVLLFAKLIEFSIQNYPKGTASFFSLCILPSLFYIVKPYQKTKKNMFLFLLGAL FLGFFMLLSFFFKKETGAEMTPVSLISFSYGMRLFFCGLIAAGAMIIPGISGSLLLLVLG EYYHILSFILHMQMIPLLYLAMGVALGLVLFSKAIHWLLHKEEEKTMFFIAGIVFMSIFQ IWTSLPM >gi|224531371|gb|GG658181.1| GENE 257 269286 - 270002 670 238 aa, chain - ## HITS:1 COG:no KEGG:Sterm_1160 NR:ns ## KEGG: Sterm_1160 # Name: not_defined # Def: molybdenum ABC transporter periplasmic molybdate-binding protein # Organism: S.termitidis # Pathway: ABC transporters [PATH:str02010] # 24 225 36 262 264 66 24.0 1e-09 MKRFLFILAIIFAFLCLSKCQLQEETKIPLSIPYELHHVVPEIITAYHREGNREEIEVFE YHSKELKDIPKIGIHIIDSWKRSLKNPILQSPLVIIGTRKIYSLEQLKDSSISLPDPDIN TTGLHAINLLKEQDLWLNFKRNITYKNKGILSMESVDLAEEDFAIVSLADTYFMKNSFIV LDLPKEEYNTFYSIQNYDKNKEEQKKFIDFLTSEKSMKIFQKYGFFKVTSEDSSKSEK >gi|224531371|gb|GG658181.1| GENE 258 270175 - 270624 616 149 aa, chain + ## HITS:1 COG:FN1079 KEGG:ns NR:ns ## COG: FN1079 COG0783 # Protein_GI_number: 19704414 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Fusobacterium nucleatum # 1 144 1 144 144 161 60.0 5e-40 MKKVELLNKYLSNLAVLLIKLHNLHWNVVGQQFMSIHNFTESQYDTYFGYYDDVAEALKM QGQRPLVKMKDYLAVASIQEVEDKDFSPCEVLSIIKADMEEMNRLAREIRAIASEEDDFA VANMMEDHISATVKQLWFIDSMTKVDCKL >gi|224531371|gb|GG658181.1| GENE 259 270933 - 272573 2037 546 aa, chain + ## HITS:1 COG:FN1499 KEGG:ns NR:ns ## COG: FN1499 COG5295 # Protein_GI_number: 19704831 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 181 546 89 479 479 108 29.0 2e-23 MLEEKSVKHWLKRKVKFTEALLVAFLITGGIASANVVVGTGNDKGNNKITNLSGVLVGEK NEIDSTDGNEIFGNDNTITGHDGEQKSQNVGIFGSMNRVKGADIMYIAGYQNKAENQLHS NIHGWSNVSENMTSGSILGNTNFLKGTTESNTPLQDLNTKYNLGIDTKGLGFLYLVATPK TNVMNNIIGNGNSMKGSNLSSVIGSLNNIMNSDLSDVHGVNNHLTADKENGSSYAMLSGY GNKGKNIQHTTIVGSENTVENGSSNVVIGDKHKLTKVSNSIILGSTEQETETTVSDVVSI GHNAKVEKEGGIALGSSSVANREKGQAGFDISTNLASTNESAIWKATHSALSIGDGNTVT RQITGVAAGSEDTDAVNVAQLKALKESTEENTKEMTKKLYHLGEEIDGVRSEARGIGALS ASLAALHPMQYDKAKPNQVMAGVGTYRDKQAVAVGMTHYFTENLMMTAGVSLAETSNTKA MANVGVTWKFGKGDDRENLPEVYKEGSISSIQVMQGKMMNLENINKEQQTKIEMLEKQVK LLLENR >gi|224531371|gb|GG658181.1| GENE 260 272611 - 272724 108 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYNKKPLEYSRGYIFKWCLEMDSNHRPYGYEPYALAN >gi|224531371|gb|GG658181.1| GENE 261 273056 - 273907 1043 283 aa, chain + ## HITS:1 COG:FN1089 KEGG:ns NR:ns ## COG: FN1089 COG1660 # Protein_GI_number: 19704424 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Fusobacterium nucleatum # 3 283 4 290 290 300 57.0 2e-81 MKKEVIIVTGLSGGGKTTVLNILEDLSYYTIDNMPIGMEKFLLYTNLDKIAIGIDIRTFQ SLEDFLSVTESLQSKKISYSIIFVEASKEVILSRYHLTRRHHPLKESTLLKSIEKEIAFM SSIKEMADGVIDTSFLKPRDLEPKIKAILKVPGCSREMNIHLQSFGFKYGLPIDVDLVFD VRFLPNPYYKEELKEKSGNDPEVVDYIDSFPISAEFYKKLYDFISFLIPQYITEGKKHLS IGIGCSGGKHRSVAFVNKLYKDLVMEKKFRVYKSHREQEFGNW >gi|224531371|gb|GG658181.1| GENE 262 273894 - 275666 1857 590 aa, chain + ## HITS:1 COG:FN1090 KEGG:ns NR:ns ## COG: FN1090 COG0322 # Protein_GI_number: 19704425 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Fusobacterium nucleatum # 1 588 1 588 589 695 62.0 0 MEIGKWDIPENPGVYLMKEKNKVIYVGKAKNLYKRVKSYFQKEVDREKTRELVKHIEDIE YILCPSELDALLLENNLIKKYNPKYNIALKDEKTYPYLSLTKETFPAFHMIRKSKHLDLE HREYFGPYPFGAWKLKKILLKLFKIRDCFWDMNKKYKRPCLKYDMKTCLGPCVHKEVREE YQAMVAKVREVLKGNTKDCIQELRVQMEEMAEKFEFEKAIILREQIQELANLEKEQISEY GKEVDEDIFVWKEVFDRMFLCVLNVREGKILGKISNNFLLEEKVYENLEEELLLSYYRKY PIPKSIVFEEKQQEVLKEGLIHLELMFDRKIESYYPKIKSRRLELLEMAFLNLEKDIENF HLKKEVIEDGMKELYSFLGLKHFPRRIECFDISNIQGKDAVASMSVSIEGKAAKGEYRKF KIQCKDTPDDFAMMREVIYRRYSKLEPKDFPDVILIDGGLGQINSAGAILEELGKIQFTD LLSLAKRDEEVYKYGETLPYSISKDKEALKIFQRVRDEAHRFGITYHRKLRSKRVISSEL DHIEGIGEVRRKKLLKRFSSVSGVKVASLEELEECVPKQVAIRIKEELGG >gi|224531371|gb|GG658181.1| GENE 263 275671 - 277188 1709 505 aa, chain + ## HITS:1 COG:FN1091 KEGG:ns NR:ns ## COG: FN1091 COG2208 # Protein_GI_number: 19704426 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Serine phosphatase RsbU, regulator of sigma subunit # Organism: Fusobacterium nucleatum # 57 505 1 447 447 467 55.0 1e-131 MFYILLLLVLLFLFFLLLRKIEMINTREKLRIITGLKNHLEMDNLQEVIQIEYDETLKQI VKQEAELNNSLEELKEYKKELELTYDSLLSKSTQLEYSNQFLEKRVANLSNLNSISRSVL SIFELDKIINIILDAYFVLTGAKRISLYLWDEEGNLLNKKIKGSIRFQGTVSYSPELLKK FGKTEYERIYQELGKGFTVLKDEELIISPLSVNQEEMGVIYIIEDKDKMIDIDEEMMSAL GIQIGTAIKNARAYYELLSNERISQELAVASRIQNRILPQDIHSVDGLQIAKYFKPAKEI GGDYYDYGMLRDEIFFITIADVSGKGVPAAFLMALGRSVLKTLMEMKQGCPSQEMQELNQ LIYGDITEEMFITMLHSKYDLKTRTLTFSNAGHNPLLVYKAAKDVIELHTVKGVALGFLE NYAYREASLEIEKGDIVVFYTDGITEAENMNSELFGIERLKEVVYNNKGRSAEKIKEAIL DEIIAFREEREQVDDITFVILKSKK >gi|224531371|gb|GG658181.1| GENE 264 277207 - 278115 1085 302 aa, chain + ## HITS:1 COG:FN1092 KEGG:ns NR:ns ## COG: FN1092 COG3872 # Protein_GI_number: 19704427 # Func_class: R General function prediction only # Function: Predicted metal-dependent enzyme # Organism: Fusobacterium nucleatum # 4 302 7 304 304 407 69.0 1e-113 MNQKMSIGGQAVLEGVMMRGTEYLATAVRKNTGEIVYRKRKISSRKKEFYKMPFIRGMFM LFDSLVLGIQELTFSANQSGETEEENLSQKEAIMTTIVSLALGIGLFIVLPSFIGGLLFS ENKLYANLLEAFIRLAGFVLYIWALSFSKDIHRVFEYHGAEHKSIYAYENDMELTPENAK KFTTLHPRCGTSFLFIVMLVAIIVFSCIDFLVPTPETLLAKLALKLILRVGLMPLIASLS YELQRYSSKHLDHFFIRLLSFPGLSLQRITTQEPDLSQLEVAIVAIKVSLGEQVQNATEI LE >gi|224531371|gb|GG658181.1| GENE 265 278144 - 278557 480 137 aa, chain + ## HITS:1 COG:FN1093 KEGG:ns NR:ns ## COG: FN1093 COG1959 # Protein_GI_number: 19704428 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Fusobacterium nucleatum # 1 132 1 128 142 138 55.0 3e-33 MRLKNEVEYVFRILLYLSKYGKDRVISSTEISEKEQIPHLFSLRILKKMEKAGLLSIQKG AKGGYSLKKDPKDITLKTAIECIEGDIIVKDCVSDPKSCSLRGGRCSVHRAMALIEKEFI EHLAKYNFQDLSDENYF >gi|224531371|gb|GG658181.1| GENE 266 278618 - 279145 513 175 aa, chain + ## HITS:1 COG:no KEGG:FN0407 NR:ns ## KEGG: FN0407 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 173 11 174 174 127 45.0 2e-28 MRKILGCLSIATLLLTGCTSTDFRNVFDSLNTSVPEAINQAVSSRVNAENELYTVGSASV GQTGSIIAQSKANKIASEALRSKIRAAVETNFKSYTLNMDSYSKNLVLPAIPELTSYATD LVIKQVKQKGAWEDSNKVYSLLSVPTAEVTSTSQKVLKSFLTNTSKKLEDLSKGI >gi|224531371|gb|GG658181.1| GENE 267 279318 - 280238 969 306 aa, chain + ## HITS:1 COG:FN0408 KEGG:ns NR:ns ## COG: FN0408 COG0777 # Protein_GI_number: 19703750 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Fusobacterium nucleatum # 6 300 13 304 304 340 57.0 2e-93 MAFFKIKNLSRSRKKYATLTVETSEVEEKENKEVKQHTENNDDKVESLWSRCPSCQEIIY QEDLQNNLWTCPNCSHHFSVSARQRIDLLIDTGSFEETDVEYCSSDPLQFPGYLEKYKET QEKENLIEGVICGRGKLQKIDVAIAVMDFKFMGGSMGSVVGEKIVDTMELGLREKIPVIV VASSGGARMQEGVLSLMQMAKTAAAAERLKKAGIPFISIPVNPTTGGVTASFAMLGDIIM SEPKARIGFAGPRVIEQTIRQKLPENFQKSEFLQEHGMVDMVVERKNMKETLYKILTNIL GATNGI >gi|224531371|gb|GG658181.1| GENE 268 280228 - 281184 1181 318 aa, chain + ## HITS:1 COG:FN0409 KEGG:ns NR:ns ## COG: FN0409 COG0825 # Protein_GI_number: 19703751 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Fusobacterium nucleatum # 1 311 1 311 313 402 67.0 1e-112 MEFERKVEDIEEKIKELEIFAEEKGIALGEEIQKLKDFRDQFLEEIYKEVTDWDKVSISR HPMRPHTVDYIEYLVDDFVELHGDRLFRDDPAIIGGLGKIDGKSMMIIGHEKGRGTEDKI KRNFGMANPEGYRKALRLFHMAERFHLPVLVLIDTAGAYPGLEAEQNGQGEAIARNLMEM SDLRTPIISVVIGEGGSGGAIGLGVADKVYMLEHSTYSVISPEGCAAILFKDSSKAPEAA QNLKISAQNLLRLEVIDGIIPESLGGAHRDPERTAINLKNVILSSFSELEQIPLEDLLEN RYNKFRKMGKFKTKIEGE >gi|224531371|gb|GG658181.1| GENE 269 281189 - 282160 1451 323 aa, chain + ## HITS:1 COG:FN0410 KEGG:ns NR:ns ## COG: FN0410 COG0205 # Protein_GI_number: 19703752 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Fusobacterium nucleatum # 2 323 8 329 329 484 76.0 1e-137 MIERKIAIMTSGGDSPGMNAAIRAAAKTAMSKGMTVYGVRRGYLGMLNDEIFPMTGQFVS GIVDKGGTVLLTARCDEFREEKFRAIAANNLKKRGIEGLVVIGGDGSYHGADLLYREHGI KVIGIPGTIDNDIKGTQFTLGFDTCLNTILDAISKIRDTATSHERTILVEVMGRSAGDLA LQACIAGGGDGIMIPEMDNPIELLALQLKERRKSGKLHDIVLVAEGVGRVYEIEQELKGR ISSEIRSVVLGHVQRGGTPSGFDRMLASRMGHKAIELLEQDQGGLMIGLEGIELVTHPID YAWNGERKTNLDTDYELALLLAK >gi|224531371|gb|GG658181.1| GENE 270 282180 - 282482 477 100 aa, chain + ## HITS:1 COG:FN0411 KEGG:ns NR:ns ## COG: FN0411 COG2926 # Protein_GI_number: 19703753 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 2 98 1 97 98 101 83.0 4e-22 MVDNVLELVRKERRKNQIRREIEDNDRKIRDNRKRVELLSNLKGYLTANMSYEDILDIID NMSSDYEDRVDDYIIRNAELGKERREINKTVKDLKKSMVD >gi|224531371|gb|GG658181.1| GENE 271 282484 - 283077 827 197 aa, chain + ## HITS:1 COG:FN0412 KEGG:ns NR:ns ## COG: FN0412 COG0353 # Protein_GI_number: 19703754 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Fusobacterium nucleatum # 1 197 1 197 197 273 63.0 1e-73 MAIKSLEKLIDQFHKLPGIGRKSATRLGFHILDYSEQEIDDFIQALEDIKGKIHRCPVCG DYCEEELCPICSDEARDHKSICVVEDSRDVVSLEKTGKYRGLYHILGGKLAPLQGITPDK LNLKSLLERLAKEDVQEIILALNPDLEGETTAMYLVKLLKPFDVKITKIASGIPMGGNLE FADSATIARALDARQEV Prediction of potential genes in microbial genomes Time: Sat Jul 9 16:54:07 2011 Seq name: gi|224531370|gb|GG658182.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.4, whole genome shotgun sequence Length of sequence - 155677 bp Number of predicted genes - 154, with homology - 145 Number of transcription units - 53, operones - 29 average op.length - 4.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 17 - 92 75.8 # Thr CGT 0 0 1 1 Op 1 . - CDS 134 - 298 146 ## gi|257451413|ref|ZP_05616712.1| hypothetical protein F3_00005 2 1 Op 2 . - CDS 291 - 983 308 ## gi|257451414|ref|ZP_05616713.1| hypothetical protein F3_00010 3 1 Op 3 . - CDS 1008 - 1526 441 ## COG0703 Shikimate kinase - Prom 1557 - 1616 8.2 - Term 1598 - 1644 9.1 4 2 Tu 1 . - CDS 1653 - 3125 1851 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 3214 - 3273 15.3 + Prom 3214 - 3273 15.2 5 3 Op 1 . + CDS 3302 - 4240 1278 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase + Prom 4297 - 4356 19.2 6 3 Op 2 . + CDS 4377 - 4496 78 ## + Prom 4555 - 4614 11.9 7 4 Op 1 4/0.000 + CDS 4642 - 5370 1004 ## COG0310 ABC-type Co2+ transport system, permease component 8 4 Op 2 8/0.000 + CDS 5373 - 5675 468 ## COG1930 ABC-type cobalt transport system, periplasmic component 9 4 Op 3 34/0.000 + CDS 5672 - 6406 510 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 10 4 Op 4 . + CDS 6420 - 7202 369 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 7252 - 7291 4.3 - Term 7241 - 7277 2.1 11 5 Tu 1 . - CDS 7290 - 8369 1249 ## gi|315918034|ref|ZP_07914274.1| predicted protein - Prom 8399 - 8458 7.0 + Prom 8414 - 8473 8.9 12 6 Op 1 . + CDS 8502 - 9281 437 ## PROTEIN SUPPORTED gi|163802692|ref|ZP_02196583.1| 30S ribosomal protein S21 13 6 Op 2 . + CDS 9340 - 9852 724 ## gi|315918036|ref|ZP_07914276.1| predicted protein + Term 9869 - 9904 4.2 + Prom 9890 - 9949 12.9 14 7 Op 1 . + CDS 9970 - 10866 1215 ## COG0053 Predicted Co/Zn/Cd cation transporters 15 7 Op 2 . + CDS 10883 - 11182 512 ## gi|257451426|ref|ZP_05616725.1| hypothetical protein F3_00070 16 7 Op 3 . + CDS 11205 - 11804 396 ## COG1011 Predicted hydrolase (HAD superfamily) 17 7 Op 4 . + CDS 11826 - 13163 1750 ## COG0534 Na+-driven multidrug efflux pump 18 7 Op 5 . + CDS 13171 - 15801 2093 ## FN1150 hypothetical protein 19 7 Op 6 . + CDS 15798 - 18821 3498 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 20 7 Op 7 . + CDS 18826 - 19644 882 ## COG0207 Thymidylate synthase 21 7 Op 8 1/0.125 + CDS 19659 - 20708 1041 ## COG0820 Predicted Fe-S-cluster redox enzyme 22 7 Op 9 1/0.125 + CDS 20718 - 22853 2520 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 23 7 Op 10 1/0.125 + CDS 22855 - 25560 2174 ## COG0210 Superfamily I DNA and RNA helicases 24 7 Op 11 28/0.000 + CDS 25557 - 26720 1124 ## COG0420 DNA repair exonuclease 25 7 Op 12 1/0.125 + CDS 26710 - 29475 2091 ## COG0419 ATPase involved in DNA repair 26 7 Op 13 . + CDS 29489 - 30124 436 ## COG1636 Uncharacterized protein conserved in bacteria 27 7 Op 14 . + CDS 30117 - 30737 816 ## FN0520 hypothetical protein + Term 30947 - 30981 0.3 - Term 30739 - 30767 2.3 28 8 Tu 1 . - CDS 30768 - 31283 716 ## COG0511 Biotin carboxyl carrier protein - Prom 31318 - 31377 9.9 29 9 Tu 1 . - CDS 31421 - 32311 950 ## COG1032 Fe-S oxidoreductase - Prom 32335 - 32394 8.5 + Prom 32361 - 32420 6.7 30 10 Tu 1 . + CDS 32443 - 33327 887 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 33357 - 33391 2.4 31 11 Tu 1 . - CDS 33269 - 33805 753 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 33836 - 33895 10.2 + Prom 33815 - 33874 10.4 32 12 Op 1 . + CDS 33979 - 36528 1802 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 33 12 Op 2 . + CDS 36607 - 36900 353 ## gi|257451444|ref|ZP_05616743.1| hypothetical protein F3_00162 + Prom 36919 - 36978 10.0 34 13 Op 1 . + CDS 37014 - 37145 281 ## 35 13 Op 2 . + CDS 37160 - 37876 855 ## FN0914 hypothetical protein 36 13 Op 3 2/0.000 + CDS 37924 - 40854 3332 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 37 13 Op 4 . + CDS 40858 - 42060 1308 ## COG3581 Uncharacterized protein conserved in bacteria + Prom 42070 - 42129 1.6 38 13 Op 5 . + CDS 42149 - 42424 382 ## gi|257451449|ref|ZP_05616748.1| FMN-binding domain-containing protein + Term 42439 - 42480 4.1 39 14 Op 1 1/0.125 + CDS 42499 - 43959 1896 ## COG1492 Cobyric acid synthase 40 14 Op 2 . + CDS 44033 - 45445 640 ## PROTEIN SUPPORTED gi|145632256|ref|ZP_01787991.1| 50S ribosomal protein L27 + Term 45455 - 45506 9.0 + Prom 45482 - 45541 14.0 41 15 Op 1 2/0.000 + CDS 45587 - 45898 365 ## COG0640 Predicted transcriptional regulators 42 15 Op 2 . + CDS 45891 - 48305 2745 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 43 15 Op 3 . + CDS 48380 - 49183 1093 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family + Prom 49201 - 49260 12.6 44 16 Op 1 . + CDS 49284 - 50588 1512 ## Coch_0229 hypothetical protein 45 16 Op 2 1/0.125 + CDS 50593 - 51174 500 ## COG0693 Putative intracellular protease/amidase 46 16 Op 3 1/0.125 + CDS 51202 - 51687 179 ## PROTEIN SUPPORTED gi|225085052|ref|YP_002656490.1| ribosomal protein S2 47 16 Op 4 1/0.125 + CDS 51699 - 52142 733 ## COG0698 Ribose 5-phosphate isomerase RpiB 48 16 Op 5 . + CDS 52170 - 52508 508 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases + Term 52535 - 52577 4.3 49 17 Tu 1 . - CDS 52552 - 53241 663 ## COG2964 Uncharacterized protein conserved in bacteria - Prom 53288 - 53347 7.7 + Prom 53192 - 53251 9.0 50 18 Tu 1 . + CDS 53485 - 55122 2119 ## COG3033 Tryptophanase + Term 55153 - 55217 5.0 + Prom 55125 - 55184 3.4 51 19 Tu 1 . + CDS 55236 - 56579 1777 ## COG0733 Na+-dependent transporters of the SNF family + Term 56592 - 56647 6.3 - Term 56585 - 56631 11.2 52 20 Tu 1 . - CDS 56632 - 57414 1190 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity - Prom 57442 - 57501 9.4 - Term 57646 - 57677 1.8 53 21 Op 1 . - CDS 57678 - 57860 248 ## gi|257451614|ref|ZP_05616913.1| hypothetical protein F3_01022 - Prom 57885 - 57944 4.4 54 21 Op 2 . - CDS 57947 - 58060 100 ## 55 21 Op 3 . - CDS 58125 - 58217 145 ## 56 21 Op 4 . - CDS 58280 - 58387 92 ## - Term 58592 - 58630 2.3 57 22 Tu 1 . - CDS 58746 - 59021 473 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 59051 - 59110 6.3 + Prom 59081 - 59140 10.5 58 23 Op 1 . + CDS 59187 - 59336 205 ## gi|315918077|ref|ZP_07914317.1| predicted protein 59 23 Op 2 . + CDS 59349 - 59465 74 ## 60 23 Op 3 . + CDS 59462 - 59746 338 ## FN0165 hypothetical protein + Term 59842 - 59896 7.9 + Prom 60206 - 60265 11.8 61 24 Op 1 . + CDS 60296 - 60679 599 ## FN1869 hypothetical protein 62 24 Op 2 . + CDS 60702 - 61517 1224 ## COG3246 Uncharacterized conserved protein 63 24 Op 3 . + CDS 61543 - 62580 1597 ## FN1867 Zn-dependent alcohol dehydrogenase and related dehydrogenase 64 24 Op 4 . + CDS 62645 - 63904 1470 ## COG1509 Lysine 2,3-aminomutase 65 24 Op 5 . + CDS 63929 - 65011 986 ## FN1865 hypothetical protein 66 24 Op 6 . + CDS 64948 - 66417 1735 ## COG1193 Mismatch repair ATPase (MutS family) 67 24 Op 7 . + CDS 66424 - 67986 2162 ## FN1863 L-beta-lysine 5,6-aminomutase alpha subunit (EC:5.4.3.3) 68 24 Op 8 . + CDS 67986 - 68783 1395 ## COG5012 Predicted cobalamin binding protein + Term 68808 - 68856 11.0 + Prom 68828 - 68887 10.0 69 25 Op 1 . + CDS 68941 - 70095 1279 ## FN0336 hypothetical protein 70 25 Op 2 1/0.125 + CDS 70108 - 70677 199 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 + Term 70682 - 70730 6.0 71 26 Op 1 . + CDS 70750 - 71988 1564 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase 72 26 Op 2 11/0.000 + CDS 71996 - 72841 1210 ## COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 73 26 Op 3 . + CDS 72854 - 73414 941 ## COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 74 26 Op 4 . + CDS 73411 - 73971 872 ## COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 75 26 Op 5 10/0.000 + CDS 74037 - 75023 1395 ## COG2376 Dihydroxyacetone kinase 76 26 Op 6 9/0.000 + CDS 75034 - 75645 941 ## COG2376 Dihydroxyacetone kinase 77 26 Op 7 1/0.125 + CDS 75654 - 76058 393 ## COG3412 Uncharacterized protein conserved in bacteria + Prom 76101 - 76160 6.1 78 27 Op 1 18/0.000 + CDS 76202 - 76951 1325 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 79 27 Op 2 3/0.000 + CDS 76964 - 78463 2216 ## COG0554 Glycerol kinase + Term 78527 - 78589 9.7 + Prom 78479 - 78538 2.1 80 28 Op 1 6/0.000 + CDS 78603 - 80036 2449 ## COG0579 Predicted dehydrogenase 81 28 Op 2 4/0.000 + CDS 80051 - 81367 1881 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 82 28 Op 3 . + CDS 81367 - 81711 446 ## COG3862 Uncharacterized protein with conserved CXXC pairs 83 28 Op 4 . + CDS 81796 - 82260 454 ## COG4574 Serine protease inhibitor ecotin + Term 82287 - 82333 10.1 + Prom 82269 - 82328 5.9 84 29 Op 1 . + CDS 82491 - 83144 898 ## COG1802 Transcriptional regulators + Prom 83149 - 83208 2.3 85 29 Op 2 . + CDS 83230 - 83364 60 ## 86 29 Op 3 1/0.125 + CDS 83304 - 84653 2118 ## COG3493 Na+/citrate symporter 87 29 Op 4 . + CDS 84681 - 86069 1974 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase 88 29 Op 5 . + CDS 86078 - 86413 450 ## gi|257451647|ref|ZP_05616946.1| hypothetical protein F3_01187 89 29 Op 6 . + CDS 86422 - 86766 607 ## COG1038 Pyruvate carboxylase 90 29 Op 7 1/0.125 + CDS 86780 - 87898 1934 ## COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 91 29 Op 8 6/0.000 + CDS 87912 - 88196 487 ## COG3052 Citrate lyase, gamma subunit 92 29 Op 9 6/0.000 + CDS 88207 - 89109 1314 ## COG2301 Citrate lyase beta subunit 93 29 Op 10 . + CDS 89111 - 90652 2580 ## COG3051 Citrate lyase, alpha subunit + Term 90664 - 90713 6.5 94 30 Tu 1 . - CDS 90769 - 91434 673 ## COG1451 Predicted metal-dependent hydrolase - Term 91444 - 91475 2.7 95 31 Op 1 . - CDS 91485 - 92273 903 ## COG2357 Uncharacterized protein conserved in bacteria 96 31 Op 2 . - CDS 92293 - 93138 646 ## FN0925 hypothetical protein 97 31 Op 3 . - CDS 93171 - 93965 600 ## FN0924 hypothetical protein - Prom 94000 - 94059 9.2 + Prom 94021 - 94080 5.6 98 32 Tu 1 . + CDS 94101 - 95558 1372 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Prom 95736 - 95795 10.4 99 33 Op 1 24/0.000 + CDS 95824 - 96897 1555 ## COG0505 Carbamoylphosphate synthase small subunit 100 33 Op 2 . + CDS 96887 - 100093 4198 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 101 33 Op 3 . + CDS 100137 - 100304 61 ## + Term 100364 - 100401 -0.9 + Prom 100639 - 100698 10.3 102 34 Tu 1 . + CDS 100723 - 101193 499 ## COG3467 Predicted flavin-nucleotide-binding protein + Term 101203 - 101245 -0.8 103 35 Tu 1 . + CDS 102864 - 104402 1877 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 104414 - 104458 5.3 - Term 104336 - 104382 1.0 104 36 Op 1 . - CDS 104477 - 105526 1090 ## COG0582 Integrase 105 36 Op 2 . - CDS 105548 - 105841 169 ## gi|257466982|ref|ZP_05631293.1| hypothetical protein FgonA2_06042 106 36 Op 3 1/0.125 - CDS 105851 - 106237 310 ## COG4804 Uncharacterized conserved protein - Prom 106302 - 106361 5.5 107 37 Tu 1 . - CDS 106379 - 106843 480 ## COG4804 Uncharacterized conserved protein - Prom 106870 - 106929 7.6 + Prom 106855 - 106914 8.1 108 38 Tu 1 . + CDS 107070 - 108725 1176 ## LPST_C1553 hypothetical protein + Term 108883 - 108949 30.0 + TRNA 108861 - 108937 66.9 # Arg CCT 0 0 - Term 108948 - 108981 4.0 109 39 Op 1 . - CDS 108992 - 110629 2779 ## COG2759 Formyltetrahydrofolate synthetase 110 39 Op 2 4/0.000 - CDS 110635 - 111069 460 ## COG0757 3-dehydroquinate dehydratase II 111 39 Op 3 . - CDS 111041 - 111844 777 ## COG0169 Shikimate 5-dehydrogenase 112 39 Op 4 . - CDS 111891 - 112097 248 ## gi|257466989|ref|ZP_05631300.1| chorismate mutase 113 39 Op 5 5/0.000 - CDS 112090 - 113070 1284 ## COG0082 Chorismate synthase 114 39 Op 6 . - CDS 113057 - 114283 895 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase - Prom 114332 - 114391 6.7 + Prom 114373 - 114432 13.3 115 40 Op 1 10/0.000 + CDS 114469 - 115194 241 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 116 40 Op 2 . + CDS 115250 - 116458 1845 ## COG0183 Acetyl-CoA acetyltransferase + Term 116488 - 116526 5.3 117 41 Op 1 . + CDS 116544 - 116921 373 ## gi|315918132|ref|ZP_07914372.1| predicted protein 118 41 Op 2 . + CDS 116918 - 118492 1723 ## COG2509 Uncharacterized FAD-dependent dehydrogenases 119 41 Op 3 . + CDS 118531 - 119712 1488 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 120 41 Op 4 . + CDS 119731 - 120411 1074 ## COG0670 Integral membrane protein, interacts with FtsH 121 41 Op 5 . + CDS 120434 - 121270 1010 ## gi|257466998|ref|ZP_05631309.1| hypothetical protein FgonA2_06122 122 41 Op 6 1/0.125 + CDS 121293 - 122084 815 ## COG1835 Predicted acyltransferases 123 41 Op 7 . + CDS 122086 - 123900 1387 ## COG1835 Predicted acyltransferases + Term 123907 - 123945 3.0 - Term 123895 - 123933 3.0 124 42 Op 1 . - CDS 123946 - 124110 216 ## FN1200 hypothetical protein 125 42 Op 2 . - CDS 124154 - 124528 532 ## COG3422 Uncharacterized conserved protein - Prom 124650 - 124709 10.5 + Prom 124624 - 124683 10.3 126 43 Tu 1 . + CDS 124737 - 125276 721 ## COG1592 Rubrerythrin + Term 125287 - 125327 4.5 + Prom 125292 - 125351 6.3 127 44 Op 1 4/0.000 + CDS 125455 - 127818 3653 ## COG0058 Glucan phosphorylase 128 44 Op 2 6/0.000 + CDS 127824 - 129656 2092 ## COG0296 1,4-alpha-glucan branching enzyme 129 44 Op 3 7/0.000 + CDS 129677 - 130822 1488 ## COG0448 ADP-glucose pyrophosphorylase 130 44 Op 4 17/0.000 + CDS 130843 - 132006 1423 ## COG0448 ADP-glucose pyrophosphorylase 131 44 Op 5 . + CDS 132017 - 133426 1298 ## COG0297 Glycogen synthase + Term 133427 - 133482 7.2 - Term 133421 - 133462 6.4 132 45 Tu 1 . - CDS 133468 - 135387 1205 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases - Prom 135432 - 135491 10.3 + Prom 135381 - 135440 14.2 133 46 Tu 1 . + CDS 135542 - 135859 632 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 135897 - 135945 7.7 + Prom 135925 - 135984 9.0 134 47 Op 1 1/0.125 + CDS 136022 - 136798 1278 ## COG1692 Uncharacterized protein conserved in bacteria 135 47 Op 2 1/0.125 + CDS 136795 - 137724 1109 ## PROTEIN SUPPORTED gi|237737638|ref|ZP_04568119.1| ribosomal protein L11 methyltransferase 136 47 Op 3 1/0.125 + CDS 137734 - 138390 844 ## COG0283 Cytidylate kinase 137 47 Op 4 . + CDS 138400 - 139629 1220 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase 138 47 Op 5 1/0.125 + CDS 139605 - 140309 760 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase 139 47 Op 6 . + CDS 140321 - 141598 2004 ## COG0104 Adenylosuccinate synthase + Term 141609 - 141649 6.2 - Term 141597 - 141636 7.7 140 48 Op 1 . - CDS 141644 - 142192 663 ## COG0693 Putative intracellular protease/amidase 141 48 Op 2 . - CDS 142211 - 142459 402 ## FN1084 hypothetical protein - Prom 142490 - 142549 8.9 + Prom 142593 - 142652 7.3 142 49 Tu 1 . + CDS 142681 - 144930 2612 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily - Term 144871 - 144908 0.8 143 50 Tu 1 . - CDS 144927 - 145724 1083 ## COG0730 Predicted permeases - Prom 145749 - 145808 9.9 + Prom 145708 - 145767 8.8 144 51 Op 1 . + CDS 145812 - 147215 355 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase 145 51 Op 2 . + CDS 147163 - 147261 87 ## 146 51 Op 3 . + CDS 147270 - 149393 198 ## PROTEIN SUPPORTED gi|152975021|ref|YP_001374538.1| 30S ribosomal protein S1 147 51 Op 4 2/0.000 + CDS 149410 - 150744 1029 ## PROTEIN SUPPORTED gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase 148 51 Op 5 . + CDS 150757 - 151311 647 ## COG0558 Phosphatidylglycerophosphate synthase 149 51 Op 6 . + CDS 151321 - 151593 320 ## gi|257451724|ref|ZP_05617023.1| YGGT family integral membrane protein 150 51 Op 7 . + CDS 151610 - 152551 1299 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 151 51 Op 8 . + CDS 152548 - 152808 415 ## gi|257451726|ref|ZP_05617025.1| hypothetical protein F3_01584 152 51 Op 9 . + CDS 152819 - 154189 1331 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 154265 - 154324 4.1 153 52 Tu 1 . + CDS 154367 - 155137 443 ## Sterm_4171 hypothetical protein + Prom 155321 - 155380 10.9 154 53 Tu 1 . + CDS 155413 - 155677 251 ## COG1309 Transcriptional regulator Predicted protein(s) >gi|224531370|gb|GG658182.1| GENE 1 134 - 298 146 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257451413|ref|ZP_05616712.1| ## NR: gi|257451413|ref|ZP_05616712.1| hypothetical protein F3_00005 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_05515 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 54 1 54 54 63 100.0 5e-09 MNKKKLYIYIVISIIAGIGLFFYDKTSFYDYIKIMGTAFLVCLFFITKHYFFKK >gi|224531370|gb|GG658182.1| GENE 2 291 - 983 308 230 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257451414|ref|ZP_05616713.1| ## NR: gi|257451414|ref|ZP_05616713.1| hypothetical protein F3_00010 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_05520 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 230 1 230 230 424 100.0 1e-117 MKYLCMLCVIVLCLSCGRAETFQTTKAEKWILLENAYLFQEAESLEKIKKLKTNIQRKKL LNNEVAIQEDKEWEETYLDFSLDYSKILKASDSLFQYEILDIEKSADGYVEHLNNGMRIE FSSSFIMIHFPKEESDFHLAAKFLYSKNRLTTFQGFEIGGIFIPKEAELDLLSSKNILHI YDSPLSDRAWEKIFLLSLEYCNQSLTRNSKAITKISPKNFTLKLERKIYE >gi|224531370|gb|GG658182.1| GENE 3 1008 - 1526 441 172 aa, chain - ## HITS:1 COG:FN0822 KEGG:ns NR:ns ## COG: FN0822 COG0703 # Protein_GI_number: 19704157 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Fusobacterium nucleatum # 1 172 1 172 172 201 62.0 4e-52 MKENIALIGFMGSGKTTVGRLLAKQLDMKFVDVDKVIAAQEKKSISDIFQENGEQYFRQK EREIILQESTKNNVVISTGGGAIIDNENIKNLQNTCFIVYLDADVHCIYDRVKNSKHRPL LQNIENLEAHISTLLEKRRFLYEFSSDYKVSIHLESNLYDTVEEIKKIYIDS >gi|224531370|gb|GG658182.1| GENE 4 1653 - 3125 1851 490 aa, chain - ## HITS:1 COG:FN0501_1 KEGG:ns NR:ns ## COG: FN0501_1 COG1982 # Protein_GI_number: 19703836 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Fusobacterium nucleatum # 1 489 1 489 503 774 75.0 0 MSKLDQSKTPLFSVLKDEYAGNNTLPFHVPGHKRGKGADQEFINFIGEGPFTIDVTIFPM VDGLHHPHGCIKEAQELAADAYDVKHSFFAVNGTSGAIQAMIISVVKPGEKLLVPRNVHK SVSAGIILSGAHPVYMNPEIDDELGIAHGVRPQTVADMLAQDSEIKAVLIINPTYYGVAT DIKKIADIVHSYDIPLIVDEAHGPHLHFHEDLPMSAVDAGADICSQSTHKILGSLTQMSL LHVNSNRVSVERVKEILSMLHTTSPSYPLMASLDCARRQIATEGKELLTKAISLAHYFRE EANKIPGIYCFGEEIIGREGAFAFDPTKITFTAKELGFTGTELEDMLTADYHIQMELADF YHTLGLVTIGDTKESINQLLDALRDISQRFSNQGRKLTHKLLKMPQIPEQVLIPREAFYR RKIKTSFDDSIGKVCGELVMAYPPGIPIIIPGERITKEILDYVKDMKVAKLQLQGMEDPD LKTINIITEI >gi|224531370|gb|GG658182.1| GENE 5 3302 - 4240 1278 312 aa, chain + ## HITS:1 COG:CAC3580 KEGG:ns NR:ns ## COG: CAC3580 COG2070 # Protein_GI_number: 15896814 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 2 306 6 347 355 172 33.0 6e-43 MLKIGNIEIKVPIFQGGMAIGVSMAELAAAVSNEGGVGVIAGTGMTKEELKKEIQKAKEK LVGIGKVLGVNIMVATTNFMELVDAAIESGVEFIIFGAGFSRDIFDYVKGTGTQAIPIVS SLKLAKISEKLGAPAVIVEGGNAGGHLGSELDSWDIVPEVAEHIHIPVIGAGGVITPKDG ERMLSLGAQGIQMGSRFVASKECGVSEVFKEMYKKVKEGEIVKIMSSAGLPANAIVSPYV KKVLDEVTEFPRNCFACLKKCTHKFCVNERLQMAHHGNYEEGIFFAGRDAWKITEILSVK EIMEKFQVLFQD >gi|224531370|gb|GG658182.1| GENE 6 4377 - 4496 78 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCFVFEEMKRGTEKRKLIGAMIDLRYFKRKADNFGFFDF >gi|224531370|gb|GG658182.1| GENE 7 4642 - 5370 1004 242 aa, chain + ## HITS:1 COG:STM2023 KEGG:ns NR:ns ## COG: STM2023 COG0310 # Protein_GI_number: 16765353 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, permease component # Organism: Salmonella typhimurium LT2 # 2 231 7 236 245 236 56.0 2e-62 MLKKRSSQVLLLFFLFFYLPKYAFSMHIMEGFLPPMWAGIWGIVCLPFLFLGFKKIQAKV EENPKLKILLAMAGAFAFVLSALKLPSVTGSCSHPTGVGLGAILFGPTVMSVLGIIVLIF QALLLAHGGITTLGANTFSMGIFGPIVSYFLYKSLQKAKVSRSVSVFLAAALGDLATYII TSLQLALAFPSPDGGLFLSFEKFLGIFAITQVPLAISEGLLTVIIFNILWKYNEDTLKDL GV >gi|224531370|gb|GG658182.1| GENE 8 5373 - 5675 468 100 aa, chain + ## HITS:1 COG:alr3944 KEGG:ns NR:ns ## COG: alr3944 COG1930 # Protein_GI_number: 17231436 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, periplasmic component # Organism: Nostoc sp. PCC 7120 # 2 100 3 100 100 97 52.0 6e-21 MQKKESIMKKNLILLFGVILMVILPLCFVSGEFGGADDQAEGVIEEVDASYHPWFESLWE PPSGEIESLLFALQAAIGAGVICYFIGYQIGKSKRDDEEE >gi|224531370|gb|GG658182.1| GENE 9 5672 - 6406 510 244 aa, chain + ## HITS:1 COG:MJ1089 KEGG:ns NR:ns ## COG: MJ1089 COG0619 # Protein_GI_number: 15669277 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Methanococcus jannaschii # 4 244 9 259 268 101 29.0 1e-21 MISLDKLAYTSTIRMKNPNEKLCFSILFLFLCIFSNDIVMSSLVFLTMGIMTVFVAKISL RVYLKLLLLPLFFTLFGVLGVVFAQWSSSLSFQENNMLIYLSLLLKALASTSCLYFLILT TPMVDVIYSLQCIRLPKLFLEIMILMYRYIFVLLEFMTIIYISQDSRLGYSSYKKSFYSM GKLVSALFLSSYQKSMECYSSMESRAYQGEIKVLDLHYRKNSKNYVYMILMAILYFAIVC LVKE >gi|224531370|gb|GG658182.1| GENE 10 6420 - 7202 369 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 13 258 137 381 398 146 35 5e-34 MKEYIIETKDLYYHYPDGTQALKGISLAIEKGKKIAIIGVNGSGKSTLFLNLNGVLKATS GKIFYEGKELKYDKRSLMEVRKNVGIVFQNPESMLFSSNVFQEVSFGPMNLGYPVEEVKK QVVSSLEEVNMLEFQEKSVHFLSYGQKKRVSIADILAMKPKVMILDEPTSSLDPRHTRQL KELFEDLHRKGITVIISTHDVNLAYEWADEILVMKDGKVVEFGASEEIFVKKELLFDCYL EQPYLVSLYEELKKKGVLKK >gi|224531370|gb|GG658182.1| GENE 11 7290 - 8369 1249 359 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315918034|ref|ZP_07914274.1| ## NR: gi|315918034|ref|ZP_07914274.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 359 4 362 362 646 100.0 0 MKKNIYSYILYLCLALIFSACTMIDINQASTYASKRQYHYSLLQLDSYLKKGNEVDPKVL QKYEQFWNEGNRYYDAIIQQMGIADLKQISLAKERKLLMHRHFASLPETIKSKLSSNIYT PMNITKLQKEAVDSYISLGDLIGNSSYSKRLHQNYAYEKAMKYSPNPSLDLQQKWNFSKN NLERNIYVRWNGYTDSFFQNILVTKIQNLLIDSDLFILGRSQNAQIYFDVDIENYQFSNN PASLKTETKYKEISVSYQEEKIKVPYQELTFTKKWYLSYILRYQLVDKNGNIIFSGYKPC KNQEEKIWKQFVVLDSRYPLNLPRNEQEPQGKMEEEFITDSFISSLKEIQFKLNKLSNY >gi|224531370|gb|GG658182.1| GENE 12 8502 - 9281 437 259 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163802692|ref|ZP_02196583.1| 30S ribosomal protein S21 [Vibrio campbellii AND4] # 2 254 10 262 271 172 34 6e-42 MKFSFEEKGEGKTIVFVHSYLWDREMWREQIDLLSQKYRCISIDLPSHRECFEKLKKEYS LEDLSQDIIDFLEEKGIEKYHYIGLSVGGMLIPYLYEKDKNKIESFVMMDSYVGAEGSEK KALYFHLLDTIENIKKIPPVMAEQIAKMFFANERKNDSNPDYVAFVNRLQNFSEEQLEDI VILGRAIFGREDKRETLKKIIIPTRILVGEEDEPRPPYESEEMSRLFPNAKVIVIPKSGH ISNRDNASCVNRVLKNLFL >gi|224531370|gb|GG658182.1| GENE 13 9340 - 9852 724 170 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315918036|ref|ZP_07914276.1| ## NR: gi|315918036|ref|ZP_07914276.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 170 3 172 172 325 100.0 1e-87 MRKNLLLGISFFALSTSMFALDGIVKFGFASNAGAYNGRSKSFESYAPNLAAEIRQGFVL GEVGAGIAYHGKVGDTGIANVPVYALLKWNVLPILPVKPYLVGKVGRVLKTNEDVKGSDP SGRGYYGVGAGIEVMDLEVEAMYSATKIRQDHRGKDWLNQVSLGVGYKIF >gi|224531370|gb|GG658182.1| GENE 14 9970 - 10866 1215 298 aa, chain + ## HITS:1 COG:MA0549 KEGG:ns NR:ns ## COG: MA0549 COG0053 # Protein_GI_number: 20089438 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Methanosarcina acetivorans str.C2A # 1 285 16 299 311 207 39.0 1e-53 MLKNYKEVQKVLFVILLLNILVAGIKTVLGYLIHSSSMLADGIHSFSDGASNVVGILGIQ LSKKPEDEDHPYGHEKIEMLSSLVIGLLLLVLGVQVLIEGIKTFQSPRSPNISVESMLLL AVTLFINIAVSYFEEKRGKQLKSTILISDAMHTRSDIYVSIGVFFSLLAIKMGLPSYVDT IMSCVVSFFILHASWEILRDNVGILLDSKVLDREKIQKIILSHPEIKGVHKIRTRGTLAH VYMDLHILVDKNMSVEEAHCLSHHLEHDLQKEFEIEIQVLIHVEPYRKVCYVNQKKEI >gi|224531370|gb|GG658182.1| GENE 15 10883 - 11182 512 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451426|ref|ZP_05616725.1| ## NR: gi|257451426|ref|ZP_05616725.1| hypothetical protein F3_00070 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_05585 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 99 1 99 99 174 100.0 2e-42 MQVEMKKEVKEYLERKDADAILLEYMPPCSMCNGSTFHVVAHMVKIRDRSKIKDFATRIQ VNGVEIFIPKEIEHMKKIKLEFKKALLSKNGSIKVTYYE >gi|224531370|gb|GG658182.1| GENE 16 11205 - 11804 396 199 aa, chain + ## HITS:1 COG:CAC3581 KEGG:ns NR:ns ## COG: CAC3581 COG1011 # Protein_GI_number: 15896815 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Clostridium acetobutylicum # 1 196 2 197 201 122 37.0 5e-28 MKNIIFDLGNVLVNFHPRDFVDKHVLEEKREKIFRLILQGEEWQKLDRGTITQQEALESF LRKMPEEKETICKIFPIYLTDCLSPNQENIKLVYELKKRGYSLYVLSNFHKNLFEKIEKE WGVFQQFDGKIISCYHHFLKPEKEIYELLFKTYQINPEESVFVDDSLENIEMARELGVLG IHLPIREELSKKLSFLLER >gi|224531370|gb|GG658182.1| GENE 17 11826 - 13163 1750 445 aa, chain + ## HITS:1 COG:FN1151 KEGG:ns NR:ns ## COG: FN1151 COG0534 # Protein_GI_number: 19704486 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 6 445 9 448 448 409 53.0 1e-114 MRQTQEQKQLVVEVFRITIPAIMDLLAQTLLAFFDMLMVASLGASAVSAVGLGHAPVIAI VPAFMAVGMGTTSLVSRAYGANNIKEGKNAVIQSLLLCIPIALVITILMLWKAEWILQHV GRADDLDFIAAKQYYKVSVLSLLFICFNVIYFATYRAIGKTKVPMIINIVGIFMNIFFNW IFIFVLKQGVFGAAIATLLSKMFSFSCFSYFTFLSKKYWISLQIRDFSWDRIMAGRILKI GIPAAAEQLLLRFGMLFFEMMIISLGNISYAAHKIASNAEAFSYNLGYGFSVAAAALVGQ QLGKNSTKGAEYNAKVCTLMSLLVMSSFALLFFSIPHLIISIFTKEIELQNLSASALRIV SICQPFLAVSMVLAGALRGAGATKSVLLITVFGIFGVRLPLTYLFLNVWKTGLLGAWWIM TIDLAFRSAATYYVFKKGKWKYLKV >gi|224531370|gb|GG658182.1| GENE 18 13171 - 15801 2093 876 aa, chain + ## HITS:1 COG:no KEGG:FN1150 NR:ns ## KEGG: FN1150 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 55 859 63 875 903 295 28.0 5e-78 MKTKKFRYLSYYDNLSDTILEYRKDSYIVVENNQVKSILLSQCYHFPIFELRPVIFSLEE FFSYLFVSSDVLLKDIKRIFLLYSCLTKEMKETWQIQSYFDFVDIANEFFLFYEEIQGKE EELEKIIQPWQEEKYSFFRQLKERLEEKKEEYLAKEFLWNREKYHPENLKEFSRIVFFDI PSFPRIFQELFSLLEKDFDLEFVLQVSKEDFDEEHYMLRQVSPVFFEGEFFCYEVGSEWE EALYLLSEREKEDFFVYSNSSYEKSFSKLFPRKFLDSSRNSFNHTKLYQFMDLQLTLLRE KEQEQKETLALDKVLSAIQKTVCREYYGFWEEDFLLIQNLLQEEYRFLSISLLQSSNYKS IIGDKESFIEKMTLFLQDLFQIETWKEGKDIYEYFEKQIDIQKWKEEEYPDVLDVFYEIL SRLYASQGKTHLLSYKNYFEGNLGRNLYQLLYRSLDSIYIKSAQSFSEEKIELRDWHSLM YERKKEKQAIFLDLDDKSLPKLTKTISFLTEVQKQQLDCQTREESILVEKYRFYQAVYSQ KRVVFLVQKSEEKNKTLSSFVEEFLWKQGKKIEKSPYSKAFFLQSLRESFSSEVSWTKEF EEGKALALKKENEELLKDGKLSLGAYDWRDLKTCSKYFYFHKILGNSGRAEELSFGLSPR LLGIVCHRFLERIGREQWKIFLQERQFAISDTTLAQYLEEEFKKDSLKIPPFLKQYLRKI VYPRIIKNTRNFLQNLEKKYRLENISRFQGEKGIEKEGIYRGKELNVSFQGRADLVIEAE QGKEIIDYKTGKTIEDQLDFYAFLFYGEEQKVEGRYYNLWDGMFSQGKKKEELNSACLEE FFKNFEEDSFYHISEKKAFCTYCPYQKICRREEEVE >gi|224531370|gb|GG658182.1| GENE 19 15798 - 18821 3498 1007 aa, chain + ## HITS:1 COG:FN1149 KEGG:ns NR:ns ## COG: FN1149 COG1074 # Protein_GI_number: 19704484 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Fusobacterium nucleatum # 1 1002 4 1054 1056 489 35.0 1e-137 MKKLVLKASAGTGKTYRLSLEYLLSLYRGVPYSEIFVMTFTRKATAEIRERILEFSLEIL SHTETGKDLLENLQKLDTELVFREEILRTAYYSMLKNKDKIRIYTIDSFFQMLFHKVVSP YYQIYSMKMIEKEEENKEFYKKILKQILSKREFFDKMKLFFDLSPEKNIENYLLLIQNMI RERWKFLLLREPYQKRERIAYERSLQEHIESFESIFRTLEEKKKKERGYFTQSFYQSFFE KGEEEKQEILKHERDTFFKTNVFDGRKLSTRGKDEEILALREELLEELESFRCDLAKEVY NEEMIFFEESLFAIFEEIYTLYDTYKRKEKIFNYDDIAVYTYLTLFQEDLHFVEGNAITD TLEEVLDLKIHSVFLDEFQDTSILQWKILSAFLERAKSVICVGDEKQSIYGWRGGEKKLF EDLPNILDAKVENLDTSYRSLSSIVDFTNDFFKSFPLLYQEEGIDWQFLESKSHKKQRGE VLSYFVEEEEALEKLGELIEEKYSGNYGSLSILARKNKTLLQISDFLEEKKIPYQLSLQK EYQEEATIDAFLSLFRYFCTGKYLYLVEFFRSSVLQASNEILKKLLTGQENMIQYIYSGK EWKEKPKGSQEVRTLYLEFQEKEGKIEDMWLHCIKLFSLTEYFNKDSHILACYSFQQSLS YYDSWFEYFEAFDKNQLVNLEAWEEESKDAIQLMSIHKSKGLEFDNVIYFEAKDSRKGNR EQSILFYFQMAEDYRSLEHYFLTRGKYRKYMDYLPEPFPDYLSNVEKKEREEEINTLYVA LTRPKHNLYLFFSETWKGRDLVEELTPSSSAMFLAENKGNREEKNQQGIVLDFQKEVKEF DKDEKQRPEKYTLLTELHRMEGLATHFFLEHLKYATEEEIEFAKKRVIQEYASYFGREKI EALFSKDRIQQILKVDSRIFSKDWDYIYPEFSIISPFDQKKYIIDRLMIKKAGKNKKGLV YLVDYKTGGNDPKQLENYKHILQELLKEEEGEYEFETKFLELGREGE >gi|224531370|gb|GG658182.1| GENE 20 18826 - 19644 882 272 aa, chain + ## HITS:1 COG:FN0240 KEGG:ns NR:ns ## COG: FN0240 COG0207 # Protein_GI_number: 19703585 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Fusobacterium nucleatum # 3 272 5 275 275 331 64.0 9e-91 MLFDEEYRKLVEYICEKGEMVEGKVRTVYADGTPAYYKQVVGYQFRLDNSGKEAFLITSR KAAWKSSIRELYWIWYLQSNNVDELVDLGCKFWNEWKQEDGTIGKAYGYQIGKKTFQYKS QLDYVIGEIKNNPNSRRILTEIWVPEDLDKMALTPCVHLTQWTVLNGKLYLEVRQRSCDV ALGLVANVFQYQVLHKLVARECNLNCGDLIWTIHNAHIYDRHLEDLQKQVRETGTEKPIL DLGEEGLENFHQKVTIENYKPLENNYKYEVAI >gi|224531370|gb|GG658182.1| GENE 21 19659 - 20708 1041 349 aa, chain + ## HITS:1 COG:FN0526 KEGG:ns NR:ns ## COG: FN0526 COG0820 # Protein_GI_number: 19703861 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Fusobacterium nucleatum # 2 348 4 355 358 518 74.0 1e-147 MEKLNLLDLSKKELTEFLVAEGMKKFYGKEVFVWLHKKFARNIQEMTNLSLQNREILEEK TYIPYLNLLKHQVSKIDKTEKFLFQLEDGNTIETVLLRHRDQRNTLCISSQVGCPVKCSF CATGQDGFVRNLRVSEILNQVYTVERRLNKRGEKLTNLVFMGMGEPLINIEALLKALEIL SSEEGICISKRRITISTSGIVPAIERILMEKVPVELAVSLHSAINEKRDQIIPINKAYPL EDLAAVLGEYQRQTKRRLTFEYILIKDFNVSEGDANALADFAHQFDHVVNLIPCNPVADT GLERPSEKKIERFYDYLKNVRKVNVSLRQEKGTDIDGACGQLRQNQRKK >gi|224531370|gb|GG658182.1| GENE 22 20718 - 22853 2520 711 aa, chain + ## HITS:1 COG:FN0525 KEGG:ns NR:ns ## COG: FN0525 COG0744 # Protein_GI_number: 19703860 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Fusobacterium nucleatum # 21 675 2 655 731 692 53.0 0 MKKIIKSLFLLSFLGVVGMGILVFSIVMKYKMELPDVQELVENYEVSAPSVIYDRNGEIV DTLYQEARDNVKLEEVPEYSKQAFVAIEDKRFYEHHGIDPRGLLRAVFVNLRSGHARQGA SSITQQLAKNAFLTMDRTLSRKIKEMIITIEIERVYTKDEILEKYLNEIYFGSGAYGLKT AAKQFFHKDIQDINLAEAAMLAGVPNRPEGYNPRRKLENAIKRMNIVLSEMREDGKITEE EYQEALKQKFISEKEASAKDKKNPKVTIIYPRKDTRHYENPEFTKLIEDFLLKKFDANTV YNKGLKIYSSLDVAMQKSARTAFNQYPLLRARNGLNGAMVTIDPFSGQIITMVGGKDFKI GNFNRAIMAKRQFGSSFKPFVYFAALLNGFESNSVLEDSPVTFGKWSPKNANGSFTNMNT TLVNALDKSINSVSVKLLSAVGVPKFREMMEQVDPKLEIPDNLTAALGTAEGNPLQLAIN YAMFVNGGYLVSPILVTSIEDKHGNLLYEVVPRKDKIFESQDTSIITYMLKSSVQSGTSA RARVITRNGAPMEQGGKTGTTNNARTVWYAGITPEYVTTAYLGYDNNRAMPGLAGGNAVA PLYHNYYQDIINKGLYTPGKFSFMEDHIKNGELVVQRLDILTGLLSPEGREFVIRRGHTV VESDNKYLNGISSIFYGNPNPQEENADEHLEDGENPIVEEEEQLFDKLLGD >gi|224531370|gb|GG658182.1| GENE 23 22855 - 25560 2174 901 aa, chain + ## HITS:1 COG:FN0524 KEGG:ns NR:ns ## COG: FN0524 COG0210 # Protein_GI_number: 19703859 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Fusobacterium nucleatum # 2 896 4 916 919 541 39.0 1e-153 MLDKNQQRVVEHTEGPLLVIAGPGSGKTKTLVERSVYLISEKKVNPSQILLSTFTEKAAR ELRMRIQKALQKKNLSVSIEEMYLGTMHSIWLRILEEYIEYSHYENGIEILDEEEEKFFL YSQLRQFKNLNFYGEFFEREHSYGDWAQSRLLQTIFAKIQEEAVDISSIRSYQEEIQFLK EAYLLYQNLLRKENKMSFSAIQMELYHSLLEYSEFLEKVQTKIHYVMIDEYQDSNPIQEK IILLLSGKYKNICVVGDEDQAIYRFRGATVENILRFPQVFEEDCETVYLEKNYRSSEEIV HLCNQWMNRVDWQGERFDKHSYSARYDTIERKSVFRISGSSNSRKRNELITWLKELKERK KIEDYSQIVFLFDNFRSPQVKRLEEDLEMAGIPVYCPRARNFFSREEVKLFFGVFMVLSP KIQESVKGYSYYEECLFRVRRLAKDDKDLQKWILEQREKEIGDFLEIYYQILSFSPFREI LEKQEEDVRRGREIYNLSLIGNILQSFQKLCKIKEDSKVERLEYLEYFFQSYLKKFIEKG VNEFEKKGEFPKGCIPFLTIHQSKGLEFSIVVLSSLYQNPPVYREKIRKSYDSLFQKKKL LQEHNEELYDFYRKFYVAFSRAKNALIFLEDNVSSSFQAFVRHSVDIVSSDFHWEDIPEE EYNSAEEMQTYSYTTDIASYDLCPRRYFFLRKISFPSLERENMIFGTLLHRCLERLHKYP DKIISLEEMIGKEKEKLEKKSKFFFQEKDIKMVYKILQEYQGKAVNLYDEILQAEGKEFL EWQGNMIYGEIDLLALQENQWKIIDFKTGKENPSYIEQLVLYQNLLRKYGKEKEIRLSLY YLLEQREEKIELSLKEEVAILEKIQRTIENIQKKEFTKREYQKEICDTCEFFSFCYRKET L >gi|224531370|gb|GG658182.1| GENE 24 25557 - 26720 1124 387 aa, chain + ## HITS:1 COG:FN0523 KEGG:ns NR:ns ## COG: FN0523 COG0420 # Protein_GI_number: 19703858 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Fusobacterium nucleatum # 1 283 1 284 291 300 56.0 3e-81 MKILHCSDLHLGKRPSGNKKFTETRYQDYFQAFEQLIEKISSLEIDVFLIAGDIFDKKEI NANILERTEALFQKLKYDHPKMTILVIEGNHDVISRQEDSWLEYLKNKGYCEVFSYRKDY EKENYFQQGDVSFYPVGYPGFMVEKALQDLAEHLDSSKKNIVIVHTAIFGMENLPGLVST ETIDLFRDKVVYMAGGHIHSFSSYPKEKPYFFVPGSLEYTNIPREKSSQKGAIYFDTDTG DFERILISPRKRIRTDIFSWESEIEEEFQRFLQKYSQKQEEIMIIPVNVKNTEYFPLERL EEIAEKEGILKVYFEIRESILGKEEEQEEYSSLEEVERELIESWDILKHPESFIRSFPRL KEFSIESNQENLFQLLDEILEEDENAD >gi|224531370|gb|GG658182.1| GENE 25 26710 - 29475 2091 921 aa, chain + ## HITS:1 COG:FN0522 KEGG:ns NR:ns ## COG: FN0522 COG0419 # Protein_GI_number: 19703857 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Fusobacterium nucleatum # 1 921 1 921 921 430 40.0 1e-120 MQIKKVVLNNYRSHSHIEVAFSKGINLILGKNGRGKTSILEAIGLALFHMTDRTGKTKGK TFMKYGEKESSIFIEFLGNDGREYSIFHHYFLKKPKVSILKDMQTEEEYRDNIEEKLEEL CGVKAEYRDIYENVIVAKQNDFINIFKETPENRARVFNKIFNTEIYNKLFIDLKGFVEQY LKEKEMLEVEENTLRLTLENKEERMEMLQQTEEKWKLYALKKEARLEEKQKIAKKIEQYE FIKREFETIKSKFSFQEQKIRQNKKELQERLVLAKKAKKARFLLEEHQESYQLYMELDKK IQEKKQEKNFLQKRREENQKLEEENRKLELLIKNNQTEEEVLQERMTEQQVLLLDLETRI EEDQKQQKELQTSLARLQSFWKEIEISLEKQKKWEQENFNLQQKQSLQEKNHKQKTEELL KLNIVEIQSFLQEIQEDKAEIQGKKERIAVYQQNIEDYQFAMHTLGQKICPFLKETCENM KGHEVDSYFQGEIQKTKKLMETLQHEIKALEEKLKKEFVYRKEEASYQLLQKEVQELEKD ILQTEILWKEILLERERQQYSFQTLLSQHNFASLEELQEKLRNLEDALLLLKIEEKEEEW KSLQKKQEILQERVEKLQKDRMSSLERQKQNILNIQEDLEEIWLEFLKEMESLETKMLSL QTSYRIYLENRKIADNLEEEKGKIRVLLLERDNLRISQREVNEKYRLLEKDLEQREQENW KDKLMEVERELLAVNETLGELGEKLKNDKQVLEKIVLQEEKIAGLSKKRNKIERKYKKAE SLRKNIKEMGTQVSKNMLHYISEGASINFHKITGRSERIYWSNEEKDKYQVYLLGENRKI EYQLLSGGEQVSVAIAIRGTMAQYFSNSKFMILDEPTNNLDIEKRKLLAEYIGEILNHLE QSIIVTHDDSFREMAEKIIEL >gi|224531370|gb|GG658182.1| GENE 26 29489 - 30124 436 211 aa, chain + ## HITS:1 COG:FN0521 KEGG:ns NR:ns ## COG: FN0521 COG1636 # Protein_GI_number: 19703856 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 207 1 209 222 230 66.0 1e-60 MKENYDKKMEEQLKALQGERKKLLIHSCCGPCSSSVLEYLKDYLDIDVYFYNPNITEKEE YETRLEELKIFLDKIQFPMKVVEGEYEVRRDFFEKIKGLEKEPETGARCKVCYELRMEEA ARKAKEEGYDYFTTVLSISPMKNATWINEIGEKLEEKYKIPFLHGDFKKKNRYLRSIQLS KEYGMYRQEYCGCIFSKLEREEKLKEREKNG >gi|224531370|gb|GG658182.1| GENE 27 30117 - 30737 816 206 aa, chain + ## HITS:1 COG:no KEGG:FN0520 NR:ns ## KEGG: FN0520 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 204 1 205 205 172 44.0 1e-41 MVNFSERTVRLVSIIVFILFLILGAKKHWFFVLEIIPIMIFFSTKGVQMFENSLWWGARV FWGLCFSIALFVILYRQIPEMIVVTKQYLMVRALMAVCVGAWLGDFFAKYIYIRLRFCVN RFASKGYRNSYKILSMKDYSQQYVKSPFKKMKVSFYYVGLEVDGVERIFLTEKEIFEQLQ HETTIEITIKRGCLGSYYGVGYEKKY >gi|224531370|gb|GG658182.1| GENE 28 30768 - 31283 716 171 aa, chain - ## HITS:1 COG:aq_1614_2 KEGG:ns NR:ns ## COG: aq_1614_2 COG0511 # Protein_GI_number: 15606729 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Aquifex aeolicus # 49 170 27 142 150 64 34.0 1e-10 MLYLEELIRGPLREKERPKPKIHQKKQEIDPILLDAILTILLGGNEMIRKFKVSIDGKVH HIEIEETTQGVSSMDFSSPTIAREEIKVEVTPKVEVETSSVKDKVTVPIAGTISNIAVHV GQTVKEGDLLFVFEAMKMENEAISSCDGVIGNIYKKEKDMVNPNEIVMEII >gi|224531370|gb|GG658182.1| GENE 29 31421 - 32311 950 296 aa, chain - ## HITS:1 COG:FN0392 KEGG:ns NR:ns ## COG: FN0392 COG1032 # Protein_GI_number: 19703734 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Fusobacterium nucleatum # 2 284 1 285 297 291 51.0 8e-79 MLYDSYDYPLYRPPSEAYSLILQITLGCSHNGCVFCGMYQSKHFHIKSIEEIKMEMDMFA TRYSHIDKIFLADGNALTAPTEFLVEILEYIKIKFPKCERVSCYATHIDIRKKSLEELQL LSSKGLKLLYLGVESGDDETLRFIRKGATAQNMIDLSKKVKDANMKLSATFILGINGQEK DNTEHAIKTGELISKMYLDYVGLLTLRLEEGSYLTKLAAEGKYTLVELEEVVRELKLILE NIKTEEIPQEIIFRSNHASNFLTLKGTLPQDRDKMLEKVKQVIQQGEYPKQRKYYL >gi|224531370|gb|GG658182.1| GENE 30 32443 - 33327 887 294 aa, chain + ## HITS:1 COG:FN0395 KEGG:ns NR:ns ## COG: FN0395 COG0697 # Protein_GI_number: 19703737 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 5 287 3 286 286 249 52.0 6e-66 MKLKLEQKTKAVIYMLISALGFTMMSVAVKAIPEISLFEKVFFRNSISCFVAFLLLLRDR RGFYVKKENRLPVFIRSFLGFLGIVTNFYAIQYLLLADSNMLGKLSPITVSFFAVLYLKE KVDKEQILGIAFSFIGALFVIKPSFSLSMLPSLAGLTSVTFAGISYTVIRYLNDKENPNI IVFYFSLMSVLCSIPFMLTDFQVPNLRQWFYLLSIGLMACLAQFFMTYSYKNAEASEVAV YNYSGIPYGIILGYLLFDEIPDIYSCIGGVIIIAMAIYLYLHNKKKKANSIERL >gi|224531370|gb|GG658182.1| GENE 31 33269 - 33805 753 178 aa, chain - ## HITS:1 COG:FN0874 KEGG:ns NR:ns ## COG: FN0874 COG0494 # Protein_GI_number: 19704209 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Fusobacterium nucleatum # 1 165 1 164 171 192 60.0 2e-49 MKFKHKERKEIFRNDVVTVYNENLVLPNGKEVSWTFTGKKEVVAILALTKKQTVIMVEQY RPAIRREFLEIPAGLVEKNELPLEAAKRELEEETGYQAESWTKICSYFGSAGVSDGEYHL FLAKELKKTHQHLDEDEFLTVREIPLEEISIYDLQDPKSIIAFQYYLLSSSCCEDTNK >gi|224531370|gb|GG658182.1| GENE 32 33979 - 36528 1802 849 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 6 849 6 812 815 698 45 0.0 MNSNMFTENSILAMNEAKNLAVKYQQQVIKPEMLAYALLENKEGLIPKVLEKMGLNIHFI YQEIGNELEKMPRVQGGSEQEISLSPSTHRVLVEAEECMKKMGDSYLSVEHLFRALIENT PILKRLGIQVEKFDEVVKKVRGNRKVESQNPEETYEVLEKYAKNLVDLAREGKIDPIIGR DSEIRRAIQIISRRTKNNPILIGEPGVGKTAIAEGLAQRILNGDVPDSLKNKIIYSLDMG ALIAGAKYQGEFEERLKGVLKEVEESEGNIILFIDEIHTIVGAGKTNGAMDAGNILKPML ARGEVRVIGATTIDEYRKYIEKDAALERRFQIILVNEPDVEDTISILRGLKEKFETYHGV RIADAAIVAAANLSHRYISDRKLPDKAIDLIDEAAAMIRTDIDSMPEELDSLTRKTLQLE IEREALQKENDVASKERLEVLEKELAELKEEKARLQSQWELEKEEVNKVKKVKEEIENVK LEMEKAERNYDLTKLSELKYGKLASLEKELQGMTFENHLLKQEVSAEEISEIVSKWTGIP VAKLTESEKEKMLHLEDSLKTRVKGQEEAVKAVADTMIRSIAGLKDKHRPMGSFIFLGPT GVGKTFLAKTLAYNLFDSEDNVIRIDMSEYMDKFSVTRLIGAPPGYVGYEEGGQLTEAVR TKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDGQGRIVDFKNTLIIMTSNLGSSYILD DISLGEQTREAVMTELRASFKPEFLNRVDEIILFKALDQKAIREIVVLALESVAEKLKEK SIQVDFSSSLIEHLAHNAYNPQYGARPLRRYIQKELETSLAKKLLSNEISEYSHIKISLE GNDIIIKKQ >gi|224531370|gb|GG658182.1| GENE 33 36607 - 36900 353 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451444|ref|ZP_05616743.1| ## NR: gi|257451444|ref|ZP_05616743.1| hypothetical protein F3_00162 [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] # 1 97 1 97 120 172 97.0 8e-42 MTRYRKLAYALLFSFCCFFSTSLFLHSNKVTLQFGEKAEKNIVLLVPQTSGTSHIAVLTQ GKSGISILENYSTEYFPDLPKKTSYLFVNFFKEKKLL >gi|224531370|gb|GG658182.1| GENE 34 37014 - 37145 281 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRTLEQEFLNEETEHSTAAMLLLASYLGLGIFMLYKTIELFIS >gi|224531370|gb|GG658182.1| GENE 35 37160 - 37876 855 238 aa, chain + ## HITS:1 COG:no KEGG:FN0914 NR:ns ## KEGG: FN0914 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 215 1 235 243 203 47.0 4e-51 MNYKKPLYCLIFILISFSLLAHSFTEEKIESLYKDMNLEKRITFPAFKQGIQGMERIRNR NNNILTIVDFTKPSTEERLYIIDLDKEQVLVSSYVAHGMRTGDLYAKYFSNRKGTLKSSD GFFLTGESYKGKNGFSLRLYGLEHGRNNNAYERTLVIHAARYAEQSFINRYGRLGRSRGC LAVPRSENGKIIEYIQGGSVCYVHSEGLKYEDYAFLNFTVADTHKKPEDVEEIEKLES >gi|224531370|gb|GG658182.1| GENE 36 37924 - 40854 3332 976 aa, chain + ## HITS:1 COG:FN1139_1 KEGG:ns NR:ns ## COG: FN1139_1 COG1924 # Protein_GI_number: 19704474 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Fusobacterium nucleatum # 1 640 1 640 640 1022 77.0 0 MNYRVGIDVGSTTLKTVILDEKDNIIEKSYQRHFSKVREKTLEHIKSLESILKGKECRVA ITGSAGLGISKEYGIPFVQEVFSTAGAVKKQYPKTDVVIELGGEDAKILFLQGSIEERMN GSCAGGTGAFIDQMASLMDMNATQLDTISLDYEKIYPIASRCGVFAKTDIQPLLNQGAKK ADIAASIYQAVVEQTITGLAQGRNIEGNVLFLGGPLSFLKGLQKRFVETLHLSEKNAIFP ELAPYFVALGSAYYAGTVKEIFSFEELVRILSREKKLKEESKETPLFRTQEEYQVFQERH QRVSIPEKDILNYSGKAYLGLDSGSTTIKIVLLDEEGNLLYRHYSSSKGNPVSLFLEQLK KIRELCGERIEIVSSAVTGYGEELMQAAFGVDLGIVETVAHYTAAKYFNPQVDFIIDIGG QDIKCFHIQNGNIDSILLNEACSSGCGSFLETFAKSMGYSIQEFSEKALFARSPASLGSR CTVFMNSSVKQAQKEGAGVEDISAGLARSIVKNAIYKVIRARNAEDLGKHIVVQGGTFLN DAVLRSFEQELGREVLRLNHSELMGAYGAALYAKNVFRGQSTLLKQKDLQNFEHRSVATR CNLCTNHCHLTVNHFSTGEHFISGNKCERGAGKTVQNHLPNMVAYKNQKFDSIPLVAFGR AKIGIPRVLNMYDMLPFWAALFTNLGCDVVLSAKSSRELYMKGQHTIPSDTVCYPAKLVH GHIEDLLSKDLDAIFYPCLTYAFDEGLSDNHYNCPVVAYYPELIQANIPEVEKKNYLYPH LGMENRGLLIEKLYDCFQDIIPNLTKREMKFAVEVAYERYFRYREKIREEGKRCFTWAKL EKKPTVILASRPYHIDSEINHGLDRLLNSLGFVVLTEDSLPACEKGDSQEVLNQWTYHAR MYNAARFVGESEQTELIQLVSFGCGIDAITSDEIHAILAKKEKLYTQLKIDEINNLGASK IRLRSLAATMREREAI >gi|224531370|gb|GG658182.1| GENE 37 40858 - 42060 1308 400 aa, chain + ## HITS:1 COG:FN1140 KEGG:ns NR:ns ## COG: FN1140 COG3581 # Protein_GI_number: 19704475 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 400 1 400 407 605 74.0 1e-173 MNKNYKILIPMMLDIHFDFIAGVLRKEGYDVEILQNDSQEVIEDGLKNVHNDMCYPALLV IGQFINALKSGKYNLNRVALLLTQTGGGCRASNYICLLRKALDNNGFTQVKVFSLNFAGL EKGNEFSLSFRAGVRLFQSILYGDLLMLLYNQSVALEKNLGDTKKTLLYWKKKLVEDIGK KKFSQLKENYRNILEDFASIPKNKNNEKIKVGIVGEIYMKYSPLGNNHLTEYLEQEKAEV VNTGILDFLLFNIYDVIFDKKIYGKSGIRYVIAKMLTSYIQKKQEEMISCIKENGHFRAP SAFSKVVEMTKGYLGHGVKMGEGWLLTAEMLEFIQMGVNNIICAQPFGCLPNHIIAKGMI RKIKTNHPEANIVAVDYDPGASSINQENRIRLMLENAKYL >gi|224531370|gb|GG658182.1| GENE 38 42149 - 42424 382 91 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451449|ref|ZP_05616748.1| ## NR: gi|257451449|ref|ZP_05616748.1| FMN-binding domain-containing protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 91 36 126 126 145 100.0 1e-33 MILGSLFAFAETKEGAAMGFKDEIRVSVDVQGGKIISIEVSHRDPERVAKPAIEELKQEI LKKQSVEVDDIAGATATSQGFREAVKKAMEK >gi|224531370|gb|GG658182.1| GENE 39 42499 - 43959 1896 486 aa, chain + ## HITS:1 COG:FN2070 KEGG:ns NR:ns ## COG: FN2070 COG1492 # Protein_GI_number: 19705360 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Fusobacterium nucleatum # 2 485 5 490 491 486 55.0 1e-137 MQKLMIQGTSSSAGKTTIVAGLCRVLAKQKKKVCPFKSQNMALNSYVDEEGRELSRATAL QAEAAMTKVKVSMNPILLKPNKDNESQVLVEGSPYGTLEAKEYFSMASQFKKIAKSNFEK LAEEYDYCILEGGGSPAEINLREYDYVNMGMAEMIDAPVILVGNIEIGGVFASLYGTIML LDEEDRKRIQGIIINKFRGDIDLLKPGIAMLEERLKKEGYCIPILGVLPCIDISLEEEDS LSSQFLDKKMEEGKIIISVLKGKQMGNTTDFQPFLQYPDVMLRYVEDPEELGKEDLIILA GSKNTLEEVEYFRRKGFEEKLKDLHKKGVPIFGICGGFQALGDQILDPYHIDGKLEEVEG FHLFTMVSTMEEEKIKMQVTKKIDMEEGLLKNCLGLEVKGYEIHHGRSSITSSVYVKEEV YGTYIHGIFENGEFTRHFLNNLRQRKHYELEAKNKDYKEFKELQYNKLAKAIEENLDMEK LYQIFR >gi|224531370|gb|GG658182.1| GENE 40 44033 - 45445 640 470 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145632256|ref|ZP_01787991.1| 50S ribosomal protein L27 [Haemophilus influenzae 3655] # 4 470 2 447 456 251 32 2e-65 MLETIKWITESVNNVLWGKNILVFLLVGSAIYFSIRTRFMQFRLFKTIVKTLFHKESEQK GISSLETFFLGTACRVGAGNIAGVVAAISVGGPGSIFWMWLVALLGASTSFVESCLAVMY RDKLEDGKYIGGSPWILKKQMNCRWLGVIYAIASIICYLGVVQVMSNSITESITSVYSNI DFGLSPVFYPIGAVFGIELTQENFLKYFLAILISIITASVIFGKSKKDAIIEALNKIVPI MAVLYILLVIFILITNITSIPAMIQNIFYQAFGGEQFLGAGFGIIVMQGVRRGLFSNEAG SGDSNYAAAVVDIEEPARQGMVQALGVFVDTLVICSATAFIVLLADPNVVGDASGMELFQ LAIQSHIGSIGAPFVVIIMFFFAFSTILAVTFYGKSAIYFINNHSNINLLYQLLIIVMVY IGGIKQNLFVWSLADFGLGIMTVINIIMIVPFAKPALDELKRYESLLKKN >gi|224531370|gb|GG658182.1| GENE 41 45587 - 45898 365 103 aa, chain + ## HITS:1 COG:CAP0031 KEGG:ns NR:ns ## COG: CAP0031 COG0640 # Protein_GI_number: 15004735 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 9 95 7 92 95 62 37.0 2e-10 MEKEKQIIEVSGIFKVLSNSMRLGILCYLSEKKEMTVNEIHEYFKGYSQPSISQQLQILK ANRIVKDRKQGQYVYYSIEDERVLKFMDTLHDLYCTRGEEENE >gi|224531370|gb|GG658182.1| GENE 42 45891 - 48305 2745 804 aa, chain + ## HITS:1 COG:FN1903_1 KEGG:ns NR:ns ## COG: FN1903_1 COG0446 # Protein_GI_number: 19705208 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Fusobacterium nucleatum # 3 454 2 464 469 526 59.0 1e-149 MSKKIVIVGGVAGGASTATRLRRLSEEYEIIMFEKGPYPSFANCGLPYHIGNIIPERESL IVQTPEKFKNRFRVDVRTFSEVVGVNTAEKKVQVQTQDEDFYEESYDVLVLSPGAKAWKA EIEGIDSHNIFSLKTIPDMDKIIAKLKNKVCKRVAIIGGGFIGIEAAENIKHLGIETILI EAGDHILSSFDSEFSENLEEEMREQGVELYLKQRVVKFQDGKELSLFLENGEIVEVDFVI MAMGVRPDTAFLKNSGITLGKRGEILVNEYLETNIQDVYALGDAIPGVALAGPANRQGRI VANNIFGKREKYCGSIGSSIIKVFDIVGAATGKNEKQLKVEGIAYETVHLYPNSHAGYYP NATQLHTKILFEKESGILLGAQCIGYEGVDKFIDVMATSMHFKGTIYDLSELELCYAPPF GSAKSPVNMAGFIGRNIEDHLMETVSKEEMEDFNIQKHFRLDLRNPEESSVALAECEASI PLDELRDHLEELPKEKEIWCYCAVGLRGYLATRILMQHGFRVKNILGGYRLLPKDWKIEN SKEETSNIEKKEEETLYQKKEMEILNVTGLSCPGPLMKLKSKMESMEEGKDLHIIASDPA FANDVQAWVKASGNHLYEVKKEKGFVHAYLSKKESALVHSSDTKVMETKEGMTIVVFSGD YDKAMAAFVIANGALAMGKRVTMFFTFWGLSILKKENPIAVKKSFIDCLFSVCLPKSWKN LPLSKMNFGGLGAKMMQVIMKRKNIESLDSLIQNAKENGVHIIACTMSMDAMGIVKEELL DGIDFGGVAQYLGAANEGNPNLFI >gi|224531370|gb|GG658182.1| GENE 43 48380 - 49183 1093 267 aa, chain + ## HITS:1 COG:L37351 KEGG:ns NR:ns ## COG: L37351 COG1387 # Protein_GI_number: 15673198 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Lactococcus lactis # 5 261 5 259 269 136 32.0 4e-32 MIYKDYHIHSEFSGDSNQNIEELIEHCISIGLKEIAITDHSEYGIQDMPPAFILNYSQYN VKIQELQEKYRKKICLRYGVEVGMDVQVKEYFERNINSYPFDFIIGSNHAIHSLDIASSN ITLGKTKQELQELYFQTLLHNIQNYHDFCVLGHMDFITRYGGEKFRGLNLKENWDIIQTI LQHLIKYGKGIEINTSGFRYHEERFYPLPEIIKEYLRLGGEIITVGSDAHIKSHIAMDFQ RVEDFLRSINYPYIASFEKRKAIIEKI >gi|224531370|gb|GG658182.1| GENE 44 49284 - 50588 1512 434 aa, chain + ## HITS:1 COG:no KEGG:Coch_0229 NR:ns ## KEGG: Coch_0229 # Name: not_defined # Def: hypothetical protein # Organism: C.ochracea # Pathway: not_defined # 201 411 229 454 454 102 34.0 5e-20 MDKKLENKIEKFYEKDNIEGVLELLDTLPEWGKEEYGEYARALNNIGRPEEALEYLMKEE AKEDTFIWNYRVCYSYSLLENWEKVIFYGKRALELDKKYEEDICYFLIESYEALKKPDEV IQILENHPDMDEIDWNSFYGKALVEKNEKKKAIPYLKKAVSLWKKYDTEFNWDGEEVTKL LAKLYYDLKMTKEFEQMKKKYHYSEANFDISKYTKEEEEQVISHIEKYFGKIEKRIPDLD AEHVNIDILIIPASTKHPYTTLMTLGMGGRFMDGTPEELIPDKFGYDELFLCLPDDWEFG LDTMWAVQYLLDMARFPFSNKSWLGAGHSISYDIYLGNSNFTGFMITYPYEYGMEAFQLD ITEEKRIHFYNIVPLYTEELDYKQEVGFEELESLFVKSPMVTDIHRANVALNENISNIED GEEETEDYQQILYQ >gi|224531370|gb|GG658182.1| GENE 45 50593 - 51174 500 193 aa, chain + ## HITS:1 COG:FN1876 KEGG:ns NR:ns ## COG: FN1876 COG0693 # Protein_GI_number: 19705181 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Fusobacterium nucleatum # 1 191 1 197 200 127 38.0 1e-29 MKKILLLLLPGVESMEFSPFLDIFGWNEMLGSKDIHLELCTLEKEVSSSWNLNLKVEKQI RNIELRDYIAVVIPGGFGSYHYFDTIENTEFRSFIQKAKKEELYILGICTGSILLASTGY FANKKMTTYLYENGRYSKQLSQYQVEFKNTMICKDDKLWTSSGPSTAIPMAFDLLEELSS RKNRKYIEAIMGF >gi|224531370|gb|GG658182.1| GENE 46 51202 - 51687 179 161 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225085052|ref|YP_002656490.1| ribosomal protein S2 [gamma proteobacterium NOR51-B] # 3 145 7 148 150 73 31 5e-12 MKIEKNRVVTLEFKVYDKESHELLEDTQDVGPFMYIQGIGAFVPKVEEFLEGKEKGFKGS LDLGMEDAYGDYDEDLIEEMKRADFEEFDDIYEGMEFVAEMDDGSEVIYTVTEVDGDKIM TDGNHPFAGRNLTFEVLVTGVREAEEKELEHGHVHFHGFED >gi|224531370|gb|GG658182.1| GENE 47 51699 - 52142 733 147 aa, chain + ## HITS:1 COG:FN1874 KEGG:ns NR:ns ## COG: FN1874 COG0698 # Protein_GI_number: 19705179 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Fusobacterium nucleatum # 3 147 2 149 149 204 72.0 5e-53 MKKIGLGADHGGFALKEVIKKHLLEKGYEVEDFGTHSTESVDYPKYGKLVAHAVIDKKVD CGILVCGTGIGISIAANKLSGIRAALCTNVTMAKLTRQHNDANILALGGRIIGDVVALEI VDTFLTTEFEGGRHSRRIESIESCELF >gi|224531370|gb|GG658182.1| GENE 48 52170 - 52508 508 112 aa, chain + ## HITS:1 COG:FN1873 KEGG:ns NR:ns ## COG: FN1873 COG0537 # Protein_GI_number: 19705178 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Fusobacterium nucleatum # 1 112 1 112 112 170 75.0 5e-43 MASIFTKIINREIPADIVYEDDLVIAFRDIAPAAKVHILFVPKKEIPTINDIQKEDETLI GYIYSVIAKKAKELGMAEQGYRVVSNCNEYGGQTVFHIHFHLLGGEPLGTMV >gi|224531370|gb|GG658182.1| GENE 49 52552 - 53241 663 229 aa, chain - ## HITS:1 COG:FN1942 KEGG:ns NR:ns ## COG: FN1942 COG2964 # Protein_GI_number: 19705247 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 228 1 228 229 274 64.0 1e-73 MKKELLAHYQSLVLFLGKTLGPSYEIVLHEVIGEKLKMIAIANGEISNRILGNPLSEETL ELLKNKTRHGENNMINHTVLLKNGKKIRSSSILIRDSKKVIGVLCINFDDSCFHEIHCQL LRTIHPDLFVQNYLSDISYNILLDELKSQKKEETQDNTIEMMMEKIFQEVSQELHFPLIR PNKKEKEKIVYELEKKGIFQLKEAIVFTAKKLSCSTTSIYRYLKKIQEE >gi|224531370|gb|GG658182.1| GENE 50 53485 - 55122 2119 545 aa, chain + ## HITS:1 COG:FN1943 KEGG:ns NR:ns ## COG: FN1943 COG3033 # Protein_GI_number: 19705248 # Func_class: E Amino acid transport and metabolism # Function: Tryptophanase # Organism: Fusobacterium nucleatum # 1 545 1 545 545 1076 94.0 0 MKNYELNVPAPKSFSYVKRNIPEVTVEQRERALKATHYNEFAFPAGMLTVDMLSDSGTTA MTDQQWSAMMLGDESYGRNKGYYVLLDAMRDCFERGDQQKKIIDLVRTDCKDIEKMMDEM YLCEYEGGLFNGGAAQLERPNAFLMPQGRAAESILFEIVKKILAVRAPGKVFTIPSNGHF DTTEGNIKQMGSVPRNLYNKKLLYEVPEGGKYEKNPFKGDMDINKLQQLIDAVGVENIPM IYTTVTNNTVCGQAVSMKSIRETSKIAHKYEIPFMLDAARWAENCYFIKMNEEGYADKSI PEIAKEMFSYCDGFTASLKKDGHANMGGILAFRDRGYFWKKFSDFNPDGSVKTDVGILLK VKQISSYGNDSYGSMSGRDIMALAAGLYECCNFSYLHERVEQCNYLAEGFYKAGVKGVVI PAGGHGVYINMDEFFDGKRGHDTFAGEGFSLELIRRYGIRVSELGDYSMEYDLKTPEQQE EVANVVRFAINRSMYSQEHLDYVIAAVKALYEDRENIPNMRIVSGHTLPMRHFHAFLEPY ANEEK >gi|224531370|gb|GG658182.1| GENE 51 55236 - 56579 1777 447 aa, chain + ## HITS:1 COG:FN1944 KEGG:ns NR:ns ## COG: FN1944 COG0733 # Protein_GI_number: 19705249 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 5 447 17 459 459 658 83.0 0 MQENTIMEKRDGFHSKWGFILACIGSAVGMGNIWRFPILVSEWGGMTFLIPYFIFVILIG STGVIAEFALGRAAGAGPVGAFGMCTEMKGNRKIGEAIGIIPVLGSLALAIGYSCVMGWI FKYTWLSIDGTMFAMQGNMEVIGSTFGQTASAGGANYWIVIALIVSFGIMSMGIAGGIEK ANKIMMPILFILFVFLGIYIAFQEGASDGYKYIFTVNPKALCNPVLWIFAFGQAFFSLSV AGNGSVIYGSYLSKTEEIPGSAKNVAFFDTLAALLAAFVIIPAMAIGGAELSSGGPGLIF IYLVNVMNNMAGGRIIQVVFYICILFAGVSSIINLYEAPVAFLQEKFKTSRVMATAIIHI VGLIVAISIQAIVSTWMDIVSIYICPLGALLAGIMFFWIAGKDFVEDAVNTGSDKKIGSW FFPAGKYLYCFLALIALIAGAIFGGIG >gi|224531370|gb|GG658182.1| GENE 52 56632 - 57414 1190 260 aa, chain - ## HITS:1 COG:FN1433 KEGG:ns NR:ns ## COG: FN1433 COG4221 # Protein_GI_number: 19704765 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Fusobacterium nucleatum # 4 259 3 258 260 286 56.0 2e-77 MNCENRLFGKIAFITGATSGIGKSTAIAFAKEGVNLILTARRENLLLELKTFLEKEYHIQ VFTLRLDVRNAEDVKRSIEMLPLSWRNIEILVNNAGLALGLDKEYLNSSDDIDTVIDTNV KGMLYVTNAIIPLMLSHKKASIIVNLGSVAGDSAYAGGAVYCASKAAIKILSDGLRIDLV DTPIKITNIKPGIVETNFSNVRFKGDEERARKVYTGIQSLTPEDIADTIVYICNLPDNVQ IPEITMTPMHQADGRCIHKV >gi|224531370|gb|GG658182.1| GENE 53 57678 - 57860 248 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257451614|ref|ZP_05616913.1| ## NR: gi|257451614|ref|ZP_05616913.1| hypothetical protein F3_01022 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_05775 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 60 1 60 60 68 100.0 2e-10 MEGKKSKMGRPTDSKKNLMLRIRLDEETYKKLEKLSKIENVSMSEFVRNFIKVQYKKKFK >gi|224531370|gb|GG658182.1| GENE 54 57947 - 58060 100 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYDKWWEIAFKIFVVVKTIEYLYKLYKWIKNKKNKDS >gi|224531370|gb|GG658182.1| GENE 55 58125 - 58217 145 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNAFLGDNHNDMCHNRVHYKNCKVADQSD >gi|224531370|gb|GG658182.1| GENE 56 58280 - 58387 92 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLILATGGVYLFLRNKYKKNKLKDLYKQAKKDLKK >gi|224531370|gb|GG658182.1| GENE 57 58746 - 59021 473 91 aa, chain - ## HITS:1 COG:FN0818 KEGG:ns NR:ns ## COG: FN0818 COG0776 # Protein_GI_number: 19704153 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Fusobacterium nucleatum # 1 91 1 91 91 117 67.0 6e-27 MTKKEFAKVLFDNGVYSSKAEAERNIETIFSLMEECIINDGSFSITNWGKLEVVERAPRL GRNPKTGEEVKIPSRKSIKFRPGKAFLEKLN >gi|224531370|gb|GG658182.1| GENE 58 59187 - 59336 205 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315918077|ref|ZP_07914317.1| ## NR: gi|315918077|ref|ZP_07914317.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 49 2 50 50 75 100.0 9e-13 MKLAKILLFPLVIIGLTLKAYDKAYEYIQYKFRIRKKWKHSDKAEDWWI >gi|224531370|gb|GG658182.1| GENE 59 59349 - 59465 74 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGRKNGKADEKSIKKNAVGNKENTYITDILEMVERKIV >gi|224531370|gb|GG658182.1| GENE 60 59462 - 59746 338 94 aa, chain + ## HITS:1 COG:no KEGG:FN0165 NR:ns ## KEGG: FN0165 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 20 94 1 75 75 87 72.0 2e-16 MISEKLKKKVKTINEEFKKLGFDLETDLEELCEEREDIAERLENTKFKKMTFSKDEEENC YILTLEDCQIGFFVILGEDEEGPWYEAEAEIIFF >gi|224531370|gb|GG658182.1| GENE 61 60296 - 60679 599 127 aa, chain + ## HITS:1 COG:no KEGG:FN1869 NR:ns ## KEGG: FN1869 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 127 1 127 128 233 91.0 1e-60 MKSVIRLRMSSHDAHYGGNLVDGARMLQLFGDVATELLIQMDGDEGLFKAYDNIEFMAPV FAGDFIEAVGEIVSAGNSSRKMVFEARKVIVPRPDISDSAADVLEEPIVVCRASGTCVTP KDKQRKK >gi|224531370|gb|GG658182.1| GENE 62 60702 - 61517 1224 271 aa, chain + ## HITS:1 COG:FN1868 KEGG:ns NR:ns ## COG: FN1868 COG3246 # Protein_GI_number: 19705173 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 271 2 272 272 496 88.0 1e-140 MEKLIITAAICGAEVTKENNPAVPYTVEEIVREAESAYKAGASIIHLHVRYDDGTPTQDK ARFKECMDAIREKCPDVIIQPSTGGAVGMTDLERLQPTELGPEMATLDCGTCNFGGDEVF TNTDNTIKNFGKIMIERGVKPEIEVFDKGMVDYAIRYAKQGYIKYPMHFDFVLGVQMAAT ARDLVFISESIPEGSTWTVAGVGRNQFPMAALAIVMGGHVRVGFEDNVFIDKGVLAKSNG ELVERVVRMAKELGREIATPAEARRILGLTK >gi|224531370|gb|GG658182.1| GENE 63 61543 - 62580 1597 345 aa, chain + ## HITS:1 COG:no KEGG:FN1867 NR:ns ## KEGG: FN1867 # Name: not_defined # Def: Zn-dependent alcohol dehydrogenase and related dehydrogenase # Organism: F.nucleatum # Pathway: not_defined # 1 345 1 345 345 569 89.0 1e-161 MKKGCKYGTHRVIEPLGVLPQPAKKISNDMELYSNEILIDVIALNIDSASFTQIEEEAHG DVEKIKAKILEIVGEKGKMQNPVTGSGGMLIGTIEKIGEDLVGVTPLKVGDKIATLVSLS LTPLKIEEITAIHPEIDRVEIKGKAILFESGIYAVLPEDMPENLALAALDVAGAPAQIAK LVKPCQSVAILGSAGKSGMLCAYEAVKRVGPTGNVIGVVRNEKEKALLERVSSKVKVVIA DATKPIDVLNAVLAANDGKEVDVAVNCVNVANTEMSTILPVKDYGIAYFFSMATGFTKAA LGAEGVGKDITMIVGNGYTHDHAAITLEELRESAVLREIFNELYL >gi|224531370|gb|GG658182.1| GENE 64 62645 - 63904 1470 419 aa, chain + ## HITS:1 COG:FN1866 KEGG:ns NR:ns ## COG: FN1866 COG1509 # Protein_GI_number: 19705171 # Func_class: E Amino acid transport and metabolism # Function: Lysine 2,3-aminomutase # Organism: Fusobacterium nucleatum # 1 417 1 424 425 738 83.0 0 MNTVNTRAKFFPNVTDEQWNDWKWQVRNRIETLDDLKQFANLSDEESEGVVKTLETLRMA ITPYYFSLIDLDDPNCPVRKQAIPTIQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVL LLITDMCSMYCRHCTRRRFAGQSDDSMPMERIDRCIEYIAKTPEVRDVLLSGGDALLVSD EFLESIIQKLRAIPHVEIIRIGSRTPVVLPQRITPELCNMLKKYHPIWLNTHFNHPKEVT PEAKKACEMLANAGVPLGNQSVLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGL EHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHKVILRNF EGVITTYTEPDHYEEGFPGDYESTGVSMLLGGQQMALEPTQLLRHDRYAKRLEEEAKNK >gi|224531370|gb|GG658182.1| GENE 65 63929 - 65011 986 360 aa, chain + ## HITS:1 COG:no KEGG:FN1865 NR:ns ## KEGG: FN1865 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 19 335 1 317 320 350 57.0 8e-95 MINTYTFLKEHKRISIIGMEKNVGKTTLLNQLILDIADQKILALTSIGRDGEEVDVVTST HKPKIFVYPGTIVATARDCLANCDITKEILYTTDFTTPMGNIVVVRAITGGYVDIAGPSY NKQAKEILNIMESFGAEISIVDGALGRKSSAIGEVTDATVLATGAAFSLDMSKVIEETKK TTILLNLPDFPVEKKEIETWMSKARVVIQKKTGDVIFLKAISTMDSVQEIKEHLNQDLEN VFVRGAITSRFLDVFIKNRGSFDKINLIAIDGTRFFISYQEYQKALACNISFYVINTIHL LFVSCNPHSPLGVDFPKKEFQNKLQQEILCHVIDVKEGEKCDLSMKEVSKESVLTDSCHG >gi|224531370|gb|GG658182.1| GENE 66 64948 - 66417 1735 489 aa, chain + ## HITS:1 COG:FN1864 KEGG:ns NR:ns ## COG: FN1864 COG1193 # Protein_GI_number: 19705169 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Fusobacterium nucleatum # 1 489 1 486 487 477 56.0 1e-134 MRFIDERSLERIGFNRLLSRVEVLSSYGEEKLKTLTNFISGEEEKLEQNFEEIEQFINFS EKGDRKSFLLTLESCIHRMKNIKKLIQMVENGNILDEVELFEVKVQAIYMEKLQECLQEL PKELQRFSLKPLSKILEALDPQSDRNPTFYLYESYSRQLTGLREQRKKVEKQIYATRDYE TIVKLKEERLTFLVEEEQEEYRIRTKLSQIILEEAAIYLENIEKIGNLDFLMAKAKFAKK YSAHRPVISRDSSLKIQKAVNLELKEMLESKGKQYTPIDIEIGAGVTIITGANMGGKSVA LKTITENLLLFHMGFFVIAEEASLPLVDFVFFISDDMQDISKGLSTFGAEIMKLREVNIF LELGKGFVVFDEFARGTNPKEGQKFVRALAKFLNGKPTISLITTHFDGVVDATMNHYQVV GLKNIDFDLLKNRIALSNKSMELIQECMDFRLEKASMEEVPKDALNIAKLIGLDEKFNEV ISQEYHKED >gi|224531370|gb|GG658182.1| GENE 67 66424 - 67986 2162 520 aa, chain + ## HITS:1 COG:no KEGG:FN1863 NR:ns ## KEGG: FN1863 # Name: not_defined # Def: L-beta-lysine 5,6-aminomutase alpha subunit (EC:5.4.3.3) # Organism: F.nucleatum # Pathway: Lysine degradation [PATH:fnu00310] # 5 520 3 518 518 901 84.0 0 MSNNKLDLNWDLVAEARESAKKIVADSQVFIDSHSTVTVERTICRLLGIDDVDAFGVPLP NAIVDFVKENGNITLGIAKYIGNAMLETGLSPQEIAEKVAKKELDICKMKWHDDFDIQLE INRIAVQTVERIRKNRETRESMIAGYGGDKTGPFLYIIVATGNIYEDVVQAVAGARQGAD IIAVIRTTGQSLLDYVPYGATSEGFGGTFATQENFRIMRNALDEVGKELGRYIRLCNYCS GLCMPEIAAMGALERLDVMLNDALYGILFRDINMQRTLCDQFFSRVINGFAGVIINTGED NYLTTADAFEEAHTVLASQFINEQYALVAGLPEEQMGLGHAFEMDPKLENGFLYELAQAE MAREIFPKAPLKYMPPTKFMTGNIFKGHIQDALFNIITITTNQRLCLLGMLTEAIHTPFL ADRALSIENALYIFNNLKDFGNDIEFKKGGIMNTRAEEVLEKAASLLKEIEGYGIFTTIE KGIFGGVKRPKDGGKGLAGVFEKDSTYFNPFIPLMLGGDK >gi|224531370|gb|GG658182.1| GENE 68 67986 - 68783 1395 265 aa, chain + ## HITS:1 COG:FN1862 KEGG:ns NR:ns ## COG: FN1862 COG5012 # Protein_GI_number: 19705167 # Func_class: R General function prediction only # Function: Predicted cobalamin binding protein # Organism: Fusobacterium nucleatum # 1 263 1 263 263 458 87.0 1e-129 MSSGLYSMEKRDFDTTLDLTKIKPYGDTMNDGKVQMSFTLPVPCNEKGVEAALLLAKQMG FVAPAVAFSGSLDKQFSYYVVYGATSYTVDYTAIKVQALEINTMDMHECEKYIEEHFDRD VVIVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYKGIEAYNLGSQIPNEEFIQKAIELK ADVLLVSQTVTQKDVHIQNMTNLVELLEAEGLRDKVILIAGGARITNDLAKELGYDAGFG PGKYADDVATYALEEMVARGMAKKK >gi|224531370|gb|GG658182.1| GENE 69 68941 - 70095 1279 384 aa, chain + ## HITS:1 COG:no KEGG:FN0336 NR:ns ## KEGG: FN0336 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 148 384 2 240 240 295 59.0 2e-78 MKRLVFVALLIFLSVTSVVKAEDWTKVSIYDNKIPSSIKMNLKYRGEHPETVDYVFVSSR TANIRDYPGMEGNIIEKYSYNDKLPLLEKIYVKGNYWYKVRTLKGNEGYIAASVSKKRNF RFDMALDKIKSLEHFLLTEKAAGRKIAAVNSYAPNPNHLDLQKNKDKYGTSADQNTAGKN ATGETVYIPDRSLVSIHNSGAGTSTVKALSVPELLTISNRNISYANIPSANFNKVVAIDS KNQNFIVFEKNGGEWEVISYVYSKTGMDSKLGFETPKGFFSTAMGKYVMPYNDENGQKQG AAKYALRFCGGGYIHGTPINDVEEVNREFFMKQKEFTLGTYSGTRKCIRTSEPHAKFLFD WVIKRPNRSANAQNLSENLVVIVF >gi|224531370|gb|GG658182.1| GENE 70 70108 - 70677 199 189 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 84 183 244 343 347 81 39 3e-14 MGNGGIMKKYLGITLLLASFVFVACGKTSNTSIRDLSTEGNQNFAIEDIDAAKKPLEDII VFNQDGVTIRREGNNLILSMPELILFDFNKYEVKNGIKPSLRTLANALGANADIKIKIDG YTDFIGSEGYNLELSVNRAKAIKSYLVAQGAIENNISIEGYGKQNPVASNDTESGRARNR RVEFIISRS >gi|224531370|gb|GG658182.1| GENE 71 70750 - 71988 1564 412 aa, chain + ## HITS:1 COG:FN0334 KEGG:ns NR:ns ## COG: FN0334 COG1448 # Protein_GI_number: 19703677 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Fusobacterium nucleatum # 1 411 1 414 415 419 50.0 1e-117 MLAKHYQGKKLNDEVFATAQRAKAAIDKYGKEAVFNATLGSLYDEEENLVVFDVVRQMFR ELPLTEFTAYAPHFTGSAGYKESVKRSVLGEHYEKEYPNYYFSVIGTPGGTGALSNTIKN YLNYGDKVLLPKRMWGPYKAMAKEAGGSFDCYELFDEEGKFHLASFEEKVNLLSEQQENL IVIINDPCQNPTGFKLSREEWLSVMKILKKASNKANIILLKDIAYQDFDTLEYREENILS DLPGNILVVYAFSLSKALGIYGMRAGAQLAVSSKKEWMEEFDTSATFSCRATWSNASRGG MEMFVKIMETPHLKRKLLEEQQKYRDLLLERADIFLREAEECGLEVLPYKSGFFLSVPIG EKVRELITELEKQNIFTIIFDDAIRIAICGLPKRKLKGLAKKIKDTIENIRG >gi|224531370|gb|GG658182.1| GENE 72 71996 - 72841 1210 281 aa, chain + ## HITS:1 COG:CAC3091 KEGG:ns NR:ns ## COG: CAC3091 COG1951 # Protein_GI_number: 15896342 # Func_class: C Energy production and conversion # Function: Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain # Organism: Clostridium acetobutylicum # 1 277 3 278 282 307 55.0 1e-83 MKKLDLCMVTNEVEKMCMAANYYVDPKVLQKIETAYCSTEKSPLAKNVLEQILENDKIAE KEQVPMCQDTGMAVIFVEIGTEVYIPGDIYEAIQEGVRRGYTNGYLRKSMVKHPLDRINT KDNTPAIIHTKMIAGSDQVKIILAPKGGGSENMSLVKMLKPADGIEGVKKLVLELISNAG GNPCPPITVGVGIGGSFEKAALLAKEALLRDTNDRSSDPIAASLEEELLEKINKLGIGPL GLGGKTTALAVKVNVFPCHIACLPVAINLNCHAVRHQEVIL >gi|224531370|gb|GG658182.1| GENE 73 72854 - 73414 941 186 aa, chain + ## HITS:1 COG:CAC3090 KEGG:ns NR:ns ## COG: CAC3090 COG1838 # Protein_GI_number: 15896341 # Func_class: C Energy production and conversion # Function: Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain # Organism: Clostridium acetobutylicum # 1 183 1 183 187 219 62.0 3e-57 MEYTVNTPLTKEVIETLKIGDVVKITGTIYTARDAAHARLVKLIEEGKELPFSLEGQIIY YVGPTPAKPGYAIGSAGPTTSYRMDPYAPILMKHGLKGMIGKGGRSQEVRDSIQKEKAIY FAAVGGAAALIAKSIQKAELIAYEDLGAEAIRKLEVKDFPAIVVNDIYGGDLYEEGRKQY MEEISL >gi|224531370|gb|GG658182.1| GENE 74 73411 - 73971 872 186 aa, chain + ## HITS:1 COG:FN0333 KEGG:ns NR:ns ## COG: FN0333 COG1954 # Protein_GI_number: 19703676 # Func_class: K Transcription # Function: Glycerol-3-phosphate responsive antiterminator (mRNA-binding) # Organism: Fusobacterium nucleatum # 1 184 1 184 186 197 53.0 9e-51 MTIEEMLALSPVIPAIKNDVSLDEAISSDSEIIFVIMANLLNIERVVTSLKEAGKKVFIH VDMIDGLSSSNYGVEYIVEKIQPFGIITTKHNIVSFALKMKIPVIQRFFILDSFSFEKTL SHIQENKPMAVEVLPGLMPKILHSLASKIDRPLITGGLISSKEDIVSALSAGACAVSTTD TKLWNI >gi|224531370|gb|GG658182.1| GENE 75 74037 - 75023 1395 328 aa, chain + ## HITS:1 COG:FN1840 KEGG:ns NR:ns ## COG: FN1840 COG2376 # Protein_GI_number: 19705145 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 1 328 5 332 332 508 80.0 1e-144 MKKLVNQRENIVEEVVQGMIKAYPEKLSRVEGEPIILRKEKKVGKVALISGGGSGHEPAH AGYVGYGMLDAAVCGEIFTSPGADKVYRAIQEVDSGAGVLLIIKNYSGDIMNFEMAAEMA AMDGITVKQVVVDDDIAVENSTYTVGRRGIAGTVFVHKILGAAAEAGYSLDELVDLGNRL VNNIKTMGMSLKSCMVFSTGKQSFEIGDDEVEIGLGIHGEPGTHREKMATADEFTEKLFA QIDRETQLQKGEKIAVLVNGLGETTLIELFIINNHLQDLLQAKEVTVVKTFVGNYMTSLD MGGFSISIVKLDEEMRKLLLAEQDTIAF >gi|224531370|gb|GG658182.1| GENE 76 75034 - 75645 941 203 aa, chain + ## HITS:1 COG:FN1841 KEGG:ns NR:ns ## COG: FN1841 COG2376 # Protein_GI_number: 19705146 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 1 202 1 202 202 254 63.0 1e-67 MLVKIVEKIADEIIQNKEYLTELDRVIGDGDHGVNLARGFEEIKAQISSYSSLAYSDIFQ KMGMTLLTKVGGASGAIYGTAFMSAGMYCKGKTELEKEDIVAIFKAMIEGVKKRGKASLG EKTLLDTVLPVYDLLQHRLEQGEDILSNTEEIKTVAKQGMESTKDIIATKGRASYVGERS LGHIDPGAASSYMMIKVICEEIK >gi|224531370|gb|GG658182.1| GENE 77 75654 - 76058 393 134 aa, chain + ## HITS:1 COG:FN1842 KEGG:ns NR:ns ## COG: FN1842 COG3412 # Protein_GI_number: 19705147 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 132 3 134 136 157 66.0 4e-39 MVGIVVVSHSKALAKEAITLAMEMKHSEFPLINGSGTDGDYFGSNPLMIKEAIEKAYTEE GVLVFVDLGSSVLNTQIAIDFLDDSIFNLDHIKIADAPLVEGLIAAVAINDAKASLTDII SELKEFKNFSKINE >gi|224531370|gb|GG658182.1| GENE 78 76202 - 76951 1325 249 aa, chain + ## HITS:1 COG:FN1838 KEGG:ns NR:ns ## COG: FN1838 COG0580 # Protein_GI_number: 19705143 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Fusobacterium nucleatum # 1 235 12 246 254 281 69.0 8e-76 MEPMTMYFAEFIGTALLLLLGNGVNMTLSLKHSYGKGGGWMCTCFGWGVSVTIAAYFVGW ISGAHLNPAVSLALAVAGSLEWTLLPGYIIAQVLGGILGATLAYLAYKRQMDEEPDVGTK LGVFSTGPSIDDAKWNVVTEAIGTAVLMIGILAIGYGKNQMPAGIGPVVVGLLIMVIGLG LGGATGFAINPARDLGPRIAHAILPIKGKGDSNWKYAWVPIIGPMIGGVLGTLLFRVVCQ MTEGCPILN >gi|224531370|gb|GG658182.1| GENE 79 76964 - 78463 2216 499 aa, chain + ## HITS:1 COG:FN1839 KEGG:ns NR:ns ## COG: FN1839 COG0554 # Protein_GI_number: 19705144 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Fusobacterium nucleatum # 1 497 1 497 497 877 84.0 0 MKYIVALDQGTTSSRAILFDENQSIVGVAQKEFTQYYPKEGWVEHDPMEIWSSQSGVLAE VIARAGITQHDIIAIGITNQRETTVVWDKNTGKPIYNAIVWQCRRTAKICDELRKIEGLE EYIKDTTGLVLDAYFSGTKIKWILDNVDGAREKAEKGDLLFGTVDTWLIWNLTHGKVHAT DYTNASRTMLYNIKELKWDERLLKELGIPKQMLPDVRDSSGNYGYANLGGTGGHRVPIAG VAGDQQSALFGQACFGEGESKNTYGTGCFLLMNTGEKFVKSNHGLVTTIAIGLDGKVQYA LEGSIFIGGASVQWLRDELRLVNESKDTEYFARKVKDNGGVYVVPAFVGLGAPYWDMYAR GAILGLTRGANKNHIIRATLESIAYQTRDVLEAMQEDSGIQLAELKVDGGAAANNFLMEF QSDILGVKVRRPVVLETTALGAAYLAGLAVGFWESKEEIKGKWILDREFTPNMEEEEKEK KYRGWKKAVSRAREWEELD >gi|224531370|gb|GG658182.1| GENE 80 78603 - 80036 2449 477 aa, chain + ## HITS:1 COG:FN0183 KEGG:ns NR:ns ## COG: FN0183 COG0579 # Protein_GI_number: 19703528 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Fusobacterium nucleatum # 1 476 23 498 498 691 71.0 0 MVDVAIIGTGIMGSSLAYELAKYQVSILLLDKEHDVSNGTTKANSAIVHAGYDAKEGSLM AKYNVWGNALYENLCKEVDAPYKRTGSYVLAFSEADRKHLEMLYQRGLANGVPDMKILER DEVLAKEPNITTEVVAALYAGTAGITGPWELAIKLVENAMENGADLMLDAEVTKIEKMDG YYRITTKDGKKVEAKTVVNAAGVYADKINNMVSSDSFKIIPRKGEYYILDKVQGNLTNSV IFQCPNEMGKGILVAQTVHGNIIVGPTALDVNDKEDVSNTLGGFESIRKAASKSIKDINY RDNIRNFAGLRAEADTGDFILGESKDAKGFFNMAGTKSPGLTSAPAMALDLSKMILEYLG KVEKKAEHIKNKKHPHFMDLSPEEKAALIAKDSRYGRIICRCENITEGEIVDTIHRKAGG RTIDGIKRRCRPGAGRCQGGFCGPRVLEILARELEVKPDEIVQDKKTGYILTGETKR >gi|224531370|gb|GG658182.1| GENE 81 80051 - 81367 1881 438 aa, chain + ## HITS:1 COG:FN0182 KEGG:ns NR:ns ## COG: FN0182 COG0446 # Protein_GI_number: 19703527 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Fusobacterium nucleatum # 1 416 3 418 421 615 77.0 1e-176 MKYDLVVVGGGPGGLAAAIEAKKNGIESILVIERAKELGGILQQCIHNGFGLHEFKEELT GPEYAGRFIDQLLEMNIEYKLDTMVLDVTDKKEVHAINSKDGYMLIEAKAIVFSMGCRER TRGAISIPGDRPAGVFTAGAAQRYINMEGYMVGKRVVILGSGDIGLIMARRLTLEGAEVL AVAELMPFSGGLTRNIVQCLEDYNIPLYLSHTVIDIQGKDRVQKVILAKVDENRQPIPGT EIEYECDTLLLSVGLIPENDISRKTGVEMDRRTNGPIVNEMMETSVPGIFACGNVVHVHD LVDFVSGEARKAGKAAAKYIKGEVSEGEYIFLKNGNGISYTVPQKVRMVNVDNSLEVFMR VNRIFKDVKLEVKAGEEVLMSLKKNHMAPGEMERIMIPKAKLEVAQGKEIVVEVVEGRQI IACTSYDNCTEEAVGGAK >gi|224531370|gb|GG658182.1| GENE 82 81367 - 81711 446 114 aa, chain + ## HITS:1 COG:FN0181 KEGG:ns NR:ns ## COG: FN0181 COG3862 # Protein_GI_number: 19703526 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Fusobacterium nucleatum # 1 114 1 114 114 154 74.0 3e-38 MKKEMICIVCPVGCHISVDTDTLEVTGNTCPRGEKYGKEELTNPKRVITSTVCIEGAEDR RCPVKTNDSIPKGLNFACMEELKKVILHSPVKRGDIVIANVLDTGVDVVATKDM >gi|224531370|gb|GG658182.1| GENE 83 81796 - 82260 454 154 aa, chain + ## HITS:1 COG:ECs3098 KEGG:ns NR:ns ## COG: ECs3098 COG4574 # Protein_GI_number: 15832352 # Func_class: R General function prediction only # Function: Serine protease inhibitor ecotin # Organism: Escherichia coli O157:H7 # 28 145 33 151 162 114 46.0 6e-26 MKKILLFLVLALSFSMFAFGENMELDIYPKAKKGMKQEIFILDKQEKEEDYKIELRFGKD IKVDCNVHSFLHGNLEEKSVEGWSYPYYIFQGSNDMVQTLMLCQEGKKLKRVYYPSATRI LPYNSKLPVVIYVPKDVKVEVHIWKRSGVKEASR >gi|224531370|gb|GG658182.1| GENE 84 82491 - 83144 898 217 aa, chain + ## HITS:1 COG:BS_ydhC KEGG:ns NR:ns ## COG: BS_ydhC COG1802 # Protein_GI_number: 16077637 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 11 194 15 199 224 101 34.0 9e-22 MIIKQKSIREQVYESLKEAIVNGEIESGEKIIELEYAEKFGVSRTPLREALRMLELEGLV SSAEKGGVTVNYISKEDIEEIYKIRVALESIVLKEIIEKDKGCLKPLHSILRETKFALDE NMESGKLIKIFQKFNHELYEVAKLKQVSKLINNLNEYTKRFRVLCLKDEIRLEEAFIEHC KLVEALENKDLEEALKINDKHLYKSMELVLNKMPDTK >gi|224531370|gb|GG658182.1| GENE 85 83230 - 83364 60 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLYYPKEVKDVYSIQYTKNKGRSLWRKRISESYLIFGNLNGEE >gi|224531370|gb|GG658182.1| GENE 86 83304 - 84653 2118 449 aa, chain + ## HITS:1 COG:FN1375 KEGG:ns NR:ns ## COG: FN1375 COG3493 # Protein_GI_number: 19704710 # Func_class: C Energy production and conversion # Function: Na+/citrate symporter # Organism: Fusobacterium nucleatum # 1 449 1 453 454 629 73.0 1e-180 MAKKNFRELFDIREFKWGGVNFPIFLCMLALTMVVVYVPFGGEKAGFLRPNFLTIFALLG VFGLLFGEIGDRIPFWDEYIGGGTVLVFFSAAVFGTYKFVPEPVVSAIKIFYGKQPVNFL EMFIPALIVGSVLTVDRRTLIKSMSGYIPLIVVGVLGASLCGIAAGLLFGKAPLDIMMNY VLPIMGGGTGAGAIPMSEMWSSKTGRPASEWFAFAISILTIANIIAILAGAFLKKLGENN PSLTGNGDLVIDDSKEVVKDKEVEVKAELVDTAAAFMMTGILFTAAHILGEVWETLGFPF EIHRLAFLIILTMVLNIAGVVPDRLKAGAKRMQTFFSKHTIWILMAAVGFTTDVNEIINA LSLANLVIAFAIVIGAVVFIMLLSKKMKFYPVEAAITAGLCMANRGGAGDVAVLGAADRM ELMSFAQISSRIGGAMMLILGSIIFGIFA >gi|224531370|gb|GG658182.1| GENE 87 84681 - 86069 1974 462 aa, chain + ## HITS:1 COG:FN1376 KEGG:ns NR:ns ## COG: FN1376 COG5016 # Protein_GI_number: 19704711 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Fusobacterium nucleatum # 1 445 1 445 448 728 79.0 0 MKKVKVMETCLRDGHQSLMATRLKTEEMLPIIETMDKAGYYSMEMWGGATFDAAIRFLNE DPWERLREIKKRAKNTKLQMLLRGQNLLGYRHYADDVVDKFIEKAIGNGIDVIRIFDALN DVRNLKQACESTKKYGAHAQLAMSYTISPVHTVEYYKNLALEMEAMGADSIAIKDMSGIL LPEVAYELVKELKSVLKVPLELHTHATAGLASMTYVKAIEAGVDIVDTAISPFSGGTSQP ATESLVRALAGAERETELNLDILKEVAEYFKPIRNKYVAEGILNPQALMTEPSIVEYQLP GGMLSNMLSQLKAQKAEHRYEEVLREIPRVREDLGYPPLVTPLSQMVGTQAVFNVISGQR YKMVPKEIKDYVKGLYGKSPVAVSEEIKEKIIGNEKVFTGRPADLLEAEYEKLKEESKEF TKSEEDVLMYAMFPQVAQTYLEKKYHSAKQEERKEQYIHIVF >gi|224531370|gb|GG658182.1| GENE 88 86078 - 86413 450 111 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451647|ref|ZP_05616946.1| ## NR: gi|257451647|ref|ZP_05616946.1| hypothetical protein F3_01187 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_05945 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 111 1 111 111 177 100.0 3e-43 MNSIIFGDRFVSFSDSLYITVVSMSIVFFALVLICFFVSCMKYIPQEKVVEKISTKKRET TKVVPQTMKEEKQEINYEDENIRLALMVASMEAAAEDENAYIKIRSIKEIV >gi|224531370|gb|GG658182.1| GENE 89 86422 - 86766 607 114 aa, chain + ## HITS:1 COG:lin1060 KEGG:ns NR:ns ## COG: lin1060 COG1038 # Protein_GI_number: 16800129 # Func_class: C Energy production and conversion # Function: Pyruvate carboxylase # Organism: Listeria innocua # 10 111 1038 1141 1146 68 39.0 4e-12 MIKVYKLKIGEKVYEVELESITEKEGTIAETTPSQKKVEITATEGTSVEAPMQGVIVDVV VSVGDQVAAGDELVVLEAMKMENAIVAPVAGRVANIYVSKGENVDNGKLLITLA >gi|224531370|gb|GG658182.1| GENE 90 86780 - 87898 1934 372 aa, chain + ## HITS:1 COG:SPy1177 KEGG:ns NR:ns ## COG: SPy1177 COG1883 # Protein_GI_number: 15675149 # Func_class: C Energy production and conversion # Function: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 371 2 375 376 418 66.0 1e-117 MELLYTLYQTTGLSMLTVNKSIMILVALCLLYLAIKKGYEPYLLLPISFGMLLVNLPGVP NEGLMDEGGLLYWLYKGVKLGIYPPMIFLAIGASTDFGPLIANPKSLLLGAAAQLGIFAA FIGSILLGLSGKVAASIGIIGGADGPTAIYLTSKLAPDMLGPIAVAAYSYMALVPVIQPP IIRLLTTKKEREIKMVQLRQVTKREKIIFPILVTIIVILLIPSSAPLVGMLMLGNLMKES GLVPNLVEHAKGAMMYVITICLGTTVGATTNAETFLTLTTIKIVLLGLFAFGFGTAGGVI FGKIMCKLSGGKINPMIGAAGVSAVPMAARVVQKVGQKENPSNFLLMHAMGPNVAGVIGS AVAAGVLLAVFK >gi|224531370|gb|GG658182.1| GENE 91 87912 - 88196 487 94 aa, chain + ## HITS:1 COG:SPy1186 KEGG:ns NR:ns ## COG: SPy1186 COG3052 # Protein_GI_number: 15675156 # Func_class: C Energy production and conversion # Function: Citrate lyase, gamma subunit # Organism: Streptococcus pyogenes M1 GAS # 1 94 1 95 102 68 41.0 3e-12 MELKVAAVAGTTDKNDIFISIEPSSQGIEISLKSKVMEQFGDNIRETIENTLKDMGISSA KIEAEDNGAVEVVIMSRVQTAVMRSAQSTKYIWK >gi|224531370|gb|GG658182.1| GENE 92 88207 - 89109 1314 300 aa, chain + ## HITS:1 COG:HI0023 KEGG:ns NR:ns ## COG: HI0023 COG2301 # Protein_GI_number: 16271998 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Haemophilus influenzae # 1 296 1 291 291 318 56.0 6e-87 MKLRRSMLFVPATKPGTMRDAYVYKPDSVMFDLEDSVAITEKDSARILLFNMLKKFGPFY KEMGIETVVRINALDTEFGVEDLEAVVRAGIEVVRIPKTDTPEDVREVEAHIERIEKEAG IPVGTTKMMVAIESPLGALNALEIAKSSPRLIGMAIGGEDYVTNLKTTRSPEGIEMLMGR AMVVMAARSAGIAALDSVYSDIDNHEGFIKEATMIKQMGFDGKSLIHPTQIELIHKVYTP DEKSLKKSIKIMKATEQALKEGKGVFTVDGKMIDKPIIERAQHVLNLAKAAGLRWEEEDV >gi|224531370|gb|GG658182.1| GENE 93 89111 - 90652 2580 513 aa, chain + ## HITS:1 COG:STM0061 KEGG:ns NR:ns ## COG: STM0061 COG3051 # Protein_GI_number: 16763451 # Func_class: C Energy production and conversion # Function: Citrate lyase, alpha subunit # Organism: Salmonella typhimurium LT2 # 21 513 10 505 506 543 55.0 1e-154 MKELRVDEALLASIKGYENRKAYVSPFAFQPEGTMQEAADLKGQVRRTKVVASLEEAIKK SGLKDGMTISFHHHFRDGDKVLPMVMEIIANMGFKDLRVAASSFTGAHECMVEYIEKGVV NRIESSGLRGKLAQAVSNGVLASPAVIRSHGGRARAIVEGDLKIDVAFLGVPSSDCMGNA NGVIGKSVCGSLGYAMVDAQYAKKVVLITDTLVAYPNHPISIPQTQVDFVVEVEEIGDPN GIMSGATRFTKNPKELLIAKNVVKAMIASGYFVDGFSMQTGSGGAALAVTRFIKEEMLKR DIKCSYALGGITAAFASLLEEGLVKEIFDVQDFDLGGVASITKNALHQEISADFYASPFN KSAAVNKLDFVVLSALEIDRDFNVNVISGSNGVIRAASGGHSDAAACAKMSIIVAPLLRG RLPIVIDRVTTVVTPGETVDVLVTELGITVNPLRQDLKANFEKAGIELIEMDTLIERAKF LAGEPKKAEFSDEVVAVVEYRDGSIIDVIKKVK >gi|224531370|gb|GG658182.1| GENE 94 90769 - 91434 673 221 aa, chain - ## HITS:1 COG:FN0946 KEGG:ns NR:ns ## COG: FN0946 COG1451 # Protein_GI_number: 19704281 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Fusobacterium nucleatum # 3 217 14 223 229 140 40.0 2e-33 MSLEYQLTRKKIKRIILRVLEDGSLQVNAPFFVSQNEIETFLASQSSWIEKTRKKLLSQK KNKNPLQDHYSSGDTFSIFGKEITLQLRVSKASSIYLGKQFLYVFYQAEEKEQITQIIQN YLLQLLKEALEFYLKNYSSRLQLYPNQFQIKTMKSAWGIYHSKGNDISFNSLLLSQTKEF IEYVVVHELCHIRYLNHQKEFWNLVATQIPNYHEIRKSSQT >gi|224531370|gb|GG658182.1| GENE 95 91485 - 92273 903 262 aa, chain - ## HITS:1 COG:FN0926 KEGG:ns NR:ns ## COG: FN0926 COG2357 # Protein_GI_number: 19704261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 4 262 3 259 259 375 74.0 1e-104 MSTKLDQSTFFEEFTIDKEYFDSTGLEWEELVRIYEDYVQLIPSLEKEAEYIVSKLIDAP NVHSVRRRVKKAKHLIEKIIRKGKKYKDRNISVENYREIVTDLIGIRVLHLFKDDWKGIH HNILNLWELSETPQVNIRRGDYNLQQFRESISDLNCEIIVREHGYRSVHYLVKIPITISL NVLVEIQVRTVFEEAWSEIDHIMRYPYDTDNPVITEYLAIFNRMVGCADEMGTFLKKVKK DFSLEKEFAEHCIPRDLDLKFK >gi|224531370|gb|GG658182.1| GENE 96 92293 - 93138 646 281 aa, chain - ## HITS:1 COG:no KEGG:FN0925 NR:ns ## KEGG: FN0925 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 13 281 33 292 292 137 35.0 6e-31 MIEITEEKKTHILPLSKEMKLEENLEIQFSSLQLKHFPISYRNFSSMEKFLEIIPLGTTD VQVGEQILHNVTLRAFVYKNFRLLELKTREFRFAFSAELFDNVFFSREAFLQYEISPDLN NPRLENIFTLFQNIFHGAKIVFQYNDAQSELSISNEIEAFKFSLLSSSLEKYQNQIASIL SKKEKNFSSLKNSFYELEILYYYLSGKTFYDGWVNAKFPKGDIHSGDSVQFVRTISYPFQ RLSYDIRQTITLRQDLGNIGNGDTIQLNRKSASILLEAIEK >gi|224531370|gb|GG658182.1| GENE 97 93171 - 93965 600 264 aa, chain - ## HITS:1 COG:no KEGG:FN0924 NR:ns ## KEGG: FN0924 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 64 260 1 200 209 93 30.0 9e-18 MDKFWNYFPSEQKFNVFLGEEYCNYDQSPSRKELAAFLLDKIPEALRHRVHNKESLSEIS QDLLDLAIFSRNNLIKTVEEFGKNISLDFSCYTSILENKRFQAIINTNMFLPLEREFHEK LHPIFPFSEPTEEKTNKLPFYRILGCINQSDKVFLTAQDTKKLKLLSFYQNFWTQLRKEL MERPTILLGMDLENKDVQEILGFLLEEIHYEKQNIYLVTSSSILSTNVTNFINKYDIKLL MKDTDSFQKSLDEKVVDVQKQLVW >gi|224531370|gb|GG658182.1| GENE 98 94101 - 95558 1372 485 aa, chain + ## HITS:1 COG:FN0923 KEGG:ns NR:ns ## COG: FN0923 COG1502 # Protein_GI_number: 19704258 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Fusobacterium nucleatum # 5 485 8 479 479 467 47.0 1e-131 MLENLMKITSILLEYIWIMNISFILILVFLERKNPLYTLLWAIILSLAPYIGFIAYLFFG ISFRKRRKANKIYELARLESKDMIEFSQRADLQNWERLIHYLEMTSKNRLTWQNTMTPYF EGEKYFRALLQDLKEAKREIKIEMYLFRNDFLGKKILEVLKERANIGVEIFLLLDGVNPP SYSMRKFLKEAGIQYRIFFPSPLPYLNISLNANYRNHKKLCIIDRKISYLGGFNIGDEYI GNGKIGYWRDTAIRVAGEIVVELEKEFYFTWNIASREKRELGEKVYPYMQEVMQEIKRRK GRNTGYMQVATSGPNFAFHTLRDNYLNLIQGAKSHIYIQTPYFVPDDIILDALKIACLSG VKVKIMIPAKSDHFIIHPVNHYFVGELLELGAEILEYQKGFLHCKVIMVDGEVVSMGSCN VDYRSFYQNFEINVNIYEKDVVREFEKQFKKDVAVSERISYPKYRSRSIRTKIKEAVFRL FAPVL >gi|224531370|gb|GG658182.1| GENE 99 95824 - 96897 1555 357 aa, chain + ## HITS:1 COG:BS_pyrAA KEGG:ns NR:ns ## COG: BS_pyrAA COG0505 # Protein_GI_number: 16078615 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Bacillus subtilis # 1 355 1 356 364 360 48.0 2e-99 MKGKLILENGMVFSGTVFGEVGETVGELVFNTGMTGYQELLTDPSYYGQMVVMTYPMIGN YGINLEDMESDKIHLRALIIKEEAKLPNNFRCEMSLDGFLRQNKVIGFKSVDTRYLTKVI RDCGAMKGIITTKDLTKKEIEERFSSYQNRDAVEQVSPKEIYEIPGKGLRLGFMDFGAKA NIIRNFKERDCHMVVFPWNTKAETILEYNVDGVFLSNGPGDPADLQNVIAEIKKLIEKKM PIVGICLGNQLTAWALGGTTKKMKFGHRGGNHPVKDLDHNRIYITSQNHGYAIDKIPEKA RVSHVSMNDGTVEGLKCDDLHIMTVQFHPEAWPGPTDCEYLFDEFLEVIKGAKKDVR >gi|224531370|gb|GG658182.1| GENE 100 96887 - 100093 4198 1068 aa, chain + ## HITS:1 COG:BS_pyrAB KEGG:ns NR:ns ## COG: BS_pyrAB COG0458 # Protein_GI_number: 16078616 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Bacillus subtilis # 6 1050 7 1047 1071 1162 55.0 0 MLDKTIKKTLVIGSGPIIIGQAAEFDYSGTQACETLKKEGIEVVLINSNPATIMTDKAIA DRIYIEPITFEFVVKVIEKERPDSIIAGMGGQTALNMAVELSEKGILEKYGIKVIGTSIE SIKRGEDRELFREAMEKIGEPILTSHVVESLEEGYKIANEIGYPVVVRPAYTLGGTGGGF AHNPQELEEILLKGLSLSRVGQVLIERSILGWKEIEYEVIRDANGNAITVCNMENIDPVG IHTGDSIVVAPSQTLTDREYQMLRRASLKIVEEIGIVGGCNVQFALHPKSFEYAIIEINP RVSRSSALASKATGYPIARVATKLAMGYLMDEVLNEVTGKTYACFEPSLDYIVVKIPKWP FDKFKKADRRLGTKMMATGEIMAIGENFESAFLKGIRSLEIGRYNLEHPAIESLRMEELK KEVVNPSDERIFVVAEMLRRGYIKEKLQKLTGIDKFFMEKIEWIVKQEELLKKMSFADLD EKFLRNLKKKGFSDKGIADLMKISEEDIHAKRMQYGIVPSYKMVDTCAGEFEASSSYYYS TYSQYDEVVVNSGRKMIVIGSGPIRIGQGIEFDYCTVHGVKTLKKLGIESIIINNNPETV STDFSTGDKLYFEPLVTEDIMNIIDKEKPEGVILQFGGQTAIKLAKDLEKRNIKILGTSA EKIDEAEDREKFEEMMESLDIKRPRGRASWDVEHGIAIANEVGYPVLVRPSYVLGGQGME ICHDEVNLVKYLEASFSRDASSPVLIDKYLNGIELEVDAICDGEDVLIPGVMEHLERAGV HSGDSITIYPQQNLYKGTEEEILDITRKIARALEVKGMMNIQFIAYQNELYVIEVNPRSS RTVPYISKISGLPVIEIASRMMLGEKLKDLEFGTGIYKKPNLVAVKVPVFSTEKLSKVEV SLGPEMRSTGEVLGVGNNVAEAVFKGLLAAKRVHQIKDRNILVTIRDKDKEEFLPIAKDL VRYGSKLYATAGTQKYLSEHGVEATAVRKISEDSPNLLDFIKNRQVDLLINTPTKANDSQ RDGFKIRRSAIEYGVEVLTSLDTMKAIIKMQDRNLKEETLDVFDISKI >gi|224531370|gb|GG658182.1| GENE 101 100137 - 100304 61 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKLLESFFLLLIKITFKKFHKKVKNIVDKMKNWEYINSNKRKVSPMQKVERKKQ >gi|224531370|gb|GG658182.1| GENE 102 100723 - 101193 499 156 aa, chain + ## HITS:1 COG:FN1023 KEGG:ns NR:ns ## COG: FN1023 COG3467 # Protein_GI_number: 19704358 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Fusobacterium nucleatum # 1 153 3 156 156 189 61.0 1e-48 MRKSNREIKDVNELLEVMKHCDVCRIALNDNGYPYILPLNFGFEVLDGNIKLYFHSAMEG YKWEVIARDNRASFEMDCEHELQYFEEQGYCTMAYESVIGRGRITELNEIEKAGALQKIM DHYHIENSYYNPAAISRTRVYVLTVESMTGKRKIKK >gi|224531370|gb|GG658182.1| GENE 103 102864 - 104402 1877 512 aa, chain + ## HITS:1 COG:FN1444_2 KEGG:ns NR:ns ## COG: FN1444_2 COG0519 # Protein_GI_number: 19704776 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Fusobacterium nucleatum # 195 512 1 318 318 571 85.0 1e-162 MKECSIIILDFGSQYNQLIARRVREMGVYAEVVPFYEPLDKILARKPKGIILSGGPASVY AEGAPTLDKALFDNGIPVLGLCYGMQLVTHLFGGEVARADKQEFGKAELIIDEKDAALFQ NIPNNTKVWMSHGDHVTRIGEGFHAIAHTDSCIAAVVNPEKNIYAFQFHPEVTHSEHGRD MLQNFVLEVAKCEKNWSMDNYIESTIKAIQEKVGDKKVILGLSGGVDSSVAATLIHRAIG DQLTCIFVDTGLLRKNEAKTVMEVYSENFHMNIKCVDAEERFLSKLKGVSDPEQKRKIIG KEFIEVFNEEAKKFEDAEFLAQGTIYPDVIESVSVKGPSVTIKSHHNVGGLPEDMKFQLL EPLRELFKDEVREVGRQLGIPHHMIDRHPFPGPGLGVRILGDITKEKADILREADDIFIE ELRKADLYGKVSQAFVVLLPVQSVGVMGDERTYEYVASLRSVNTIDFMTATWSHLPFDFM ERVSNRILNEVKGINRLTYDISSKPPATIEWE >gi|224531370|gb|GG658182.1| GENE 104 104477 - 105526 1090 349 aa, chain - ## HITS:1 COG:BS_ydcL KEGG:ns NR:ns ## COG: BS_ydcL COG0582 # Protein_GI_number: 16077547 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus subtilis # 270 334 303 367 368 72 55.0 9e-13 MYEFERIEKNNNPKDMIELGEIYDSFNNEFLAEKYFKMASEYNSLEGLFKLGNFYLDNSR LNSAENCFKELADKGNNEFQNSLAKVYRRQLKYDLAEKYYKLSIESGNQKVVFNLGYMYF LINKYDLAIETLKKLSDHPRAYITLGKIYYIKEDFENCEKYLKLAGSHSIAYLTLGKLYK EKEMFDLAEKYFKLCADEKDNKEAQKELCQLYNHQKNFALEEKYLKLVINNGDLKSFVIL AEKRYDYQSNERLFPVTKFYLHHEMNRGSKLSGVKRIRIHNLRHSHVALLIEIGVSILLI SKRLGHDNPQTTLRIYGHLYPNKQREIADSLELLEKIDLENLENEENKE >gi|224531370|gb|GG658182.1| GENE 105 105548 - 105841 169 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257466982|ref|ZP_05631293.1| ## NR: gi|257466982|ref|ZP_05631293.1| hypothetical protein FgonA2_06042 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 97 1 97 97 170 100.0 4e-41 MKFIKNQFERRDEFYRLWKEEVKINTDFYKLIHGNDILFLKGISKAEIIEVLNFCDKYHK KFKYFYVPNDNRITADRMFESINNGGMLLLKHLFDYD >gi|224531370|gb|GG658182.1| GENE 106 105851 - 106237 310 128 aa, chain - ## HITS:1 COG:FN1448 KEGG:ns NR:ns ## COG: FN1448 COG4804 # Protein_GI_number: 19704780 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 2 117 205 320 341 143 60.0 9e-35 MFLLELGKGFTFVGRQVRFTFDEKHFRVDLVFYNRLLKSFVLIDLKIGEVTHQDLGQMQM YVNYYDRFVKLPDENKTIGIIICKDKNDTLVKMTLSEDNQQIFTSRYMTVLPSKEEFKKI VDTETEKF >gi|224531370|gb|GG658182.1| GENE 107 106379 - 106843 480 154 aa, chain - ## HITS:1 COG:FN1448 KEGG:ns NR:ns ## COG: FN1448 COG4804 # Protein_GI_number: 19704780 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 3 153 2 149 341 131 49.0 5e-31 MDIEIRKNIYEEIKGLLKSARESIVSNVNSTMTKTYFLIGKRIVEEEQNGNERAEYGENL IKNLSIGLTKEFGKGFSKRNLWQMKQFYLTYSKVQTPSAQFKLSWSHYLILMRMDNIAER NFYEIEAVQNNWSLRELRRQIDSALYERLVLRKS >gi|224531370|gb|GG658182.1| GENE 108 107070 - 108725 1176 551 aa, chain + ## HITS:1 COG:no KEGG:LPST_C1553 NR:ns ## KEGG: LPST_C1553 # Name: not_defined # Def: hypothetical protein # Organism: L.plantarum_plantarum # Pathway: not_defined # 1 551 1 557 559 267 28.0 1e-69 MKWEKLFKPHILERGYEYFRSHSIQNMEISSNRIRANVLGTEEYEVEILLSQDNITELYC SCPYAEEGKNCKHIAAVLYEWFDKKEKKDKKGSTLNKKKEEISNLLEKIDKQTINSFLSE VLMENEKLFLRFKNLLNENDTEEYLELYREEIEDIILEYTDEDNFINYYNVDSFVSELED IIYKDILPMTKDGNYKLAFDILHEMFISITKLDVDDSSGILSSLVDDIYDKWLKILSKVK PGEKRIIFKSLQSNLELPILDYMKEYIEKIIVKEFREKEYREVKLKWITKKIEECDKSEL EWIRNYKLGKWAIWYFHLLQEDKYKEEEFLAFCKNYWHNEAVRKYYIDFCIQQKDYQAAF QAIEESILLDADNSFLLSYYTIKKKEIFLLQGDQEAYVEQLWKLVMKYNPGNLEFFKELK QQYPTKEWLVQREKIFQRLSKDRHLAILYHEEKLYDRLLSIVVETQGIFLLGEYEKDLIS IFPKQVLQKYERELKEMASKTGNRKQYRELVSLLRKMKKIKGGNQVVENICMEWKIQYKN RPAMMGELEKL >gi|224531370|gb|GG658182.1| GENE 109 108992 - 110629 2779 545 aa, chain - ## HITS:1 COG:FN2082 KEGG:ns NR:ns ## COG: FN2082 COG2759 # Protein_GI_number: 19705372 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Fusobacterium nucleatum # 3 545 2 544 544 850 81.0 0 MKTDIQIAQETQMLHINEIAKKIGLSEDDIEQYGKYKAKVDLDVLKRHKEKENGKLILVT AITPTPAGEGKSTVTIGLTQALNKIGKLSSAAIREPSLGPIFGMKGGAAGGGYAQVVPME DINLHFTGDMHAIGIAHNLISACIDNHINSGNQLGIDLTKITWKRVVDMNDRALRKVVIG LGGKANGVPRESSFQITVGSEIMAILCLSNNIKELKEKIGNIVFATSYSGQLLRVSDLHI EGAVAALLKDAIKPNLVQTLEHTPVFIHGGPFANIAHGCNSILATKMALKLTDYVVTEAG FAADLGAEKFLDIKCRMGGLTPNAVVLVATVRAIKHHGDGDLAKGMANLEKHLEIIQTYG LPAVVAINKFVTDTEEEIAYIEKFCNERGAEVSLCEVWAKGGEGGIDLANKVVKAIEEST KEYKPFYDINLSIQEKIEKICKGIYGADGVTFSAAAKKMLTLIEKEGYNHLPVCMSKTQK SISDNPNLLGRPTGFKVTINELRLAVGAGFIICMAGDIIDMPGLPKKPAAEVITISDEGI IDGLF >gi|224531370|gb|GG658182.1| GENE 110 110635 - 111069 460 144 aa, chain - ## HITS:1 COG:FN0046 KEGG:ns NR:ns ## COG: FN0046 COG0757 # Protein_GI_number: 19703398 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Fusobacterium nucleatum # 1 140 1 144 147 162 57.0 2e-40 MKIMIIQGPNLNFLGIREKNIYGMEDYNSLCDYITSSFPEDEVTCLQSNSEGRLIDFIQK AHLEKYDGIVINAGAYTHTSIALYDALKSISTVTVEVHISNIYAREEFRHHSYLAPACLG QISGFGKEGYIYAIQKIKTYLGGV >gi|224531370|gb|GG658182.1| GENE 111 111041 - 111844 777 267 aa, chain - ## HITS:1 COG:CAC0897_2 KEGG:ns NR:ns ## COG: CAC0897_2 COG0169 # Protein_GI_number: 15894184 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Clostridium acetobutylicum # 4 255 7 268 273 193 38.0 3e-49 MKNYALLGRKLSHSYSKIIHEYLFQKFSWDASYSFWEMEENLVSQALKISKEKKLSGFNI TVPYKESLFSQINILEDAAKNIGAINTIAIEKEQVIGYNTDCFGFQKMLEYFSIDVQNKK VIILGTGGASKAVAEALRREGANTILFVSRSPKEGQLSYSDTFDGDIIINTTPVGMYPYV EKSPIHKKILSNFKIAIDLVYNPKETKFLLEAKELGLMTINGLFMLVAQAIRSEEIWNHK TFDISLYYEVYSFLEGIVYENHDNSRS >gi|224531370|gb|GG658182.1| GENE 112 111891 - 112097 248 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257466989|ref|ZP_05631300.1| ## NR: gi|257466989|ref|ZP_05631300.1| chorismate mutase [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 68 1 68 68 83 100.0 6e-15 MDKLEEYRKQMSEIDQKIASLFLTRMDLSIQIGNYKKEKNIPIYQEEREKIVLENIKKLT LKKRNKNI >gi|224531370|gb|GG658182.1| GENE 113 112090 - 113070 1284 326 aa, chain - ## HITS:1 COG:FN0934 KEGG:ns NR:ns ## COG: FN0934 COG0082 # Protein_GI_number: 19704269 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Fusobacterium nucleatum # 3 319 4 356 357 326 50.0 3e-89 MNWGKILQLSIFGESHGSTIGITIGGLLPGMKIPFVELQRDLALRAPGQRLTSPRKEKDH FEIISGVFEGKTTGAPLTVIFPNLNTQSKDYEIHKKIPRPSHADYPAQIKYKGFQDVRGG GHFSGRLTAPLVFAGTFAKQYLKDRGIGISSTIVEKEDLEKKLPTLIQEGDSIGASISCK ITGVPVGIGNPFFDSLESSISHLAFSIPGVKGIEFGLGFDFIGKLGSEVNDEYQFIHGKV MTTTNYNGGILGGLSNGMPIEFRLVFKPTASIFKQQKSVDLEKQKNTTLLIQGRHDPCIA LRAQIVVESIAALAILDQIWMGEYYG >gi|224531370|gb|GG658182.1| GENE 114 113057 - 114283 895 408 aa, chain - ## HITS:1 COG:FN0933 KEGG:ns NR:ns ## COG: FN0933 COG0128 # Protein_GI_number: 19704268 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Fusobacterium nucleatum # 5 403 11 417 424 353 49.0 5e-97 MKLWSNHLKGKVKIPSSKSYCHRYIIAASFSKKESVLDNVSMSDDIKSTLEIVKKLGAKI EQKNQTFIIQKKSICDKKEPLYFFCSESASTLRFLIPISITNPRKVFFYGKHNLPKRPLS PFFPILEASHVSFQTKGEKDLCIQLDGQLKSGKYEIAGNVSSQFITALLFALPLLEGDSE ISILGNLESRAYIEMTLDVLEKFQIQIFRTKNTFYIPGNQIYQSYSTSIEGDYSQAAFFL VANSLGNQIQIQGLSQESKQADYEILSMIKKLETKKEDEILVLDGSQCPDIVPILSLRAA LTPGKTMIQNIERLKIKECDRLHATAEILNQLGAKVIEHTASLEFDGVSHLIGNSVSSFG DHRMAMMIAIASSCCQGEIILDDGNCVSKSYPNFWEDFKQLGGNYELG >gi|224531370|gb|GG658182.1| GENE 115 114469 - 115194 241 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 237 4 238 242 97 32 3e-19 MKRLEGKIALVTGSARGIGRATVELLAAHGAAMVISCDMVETTFEQENIHHEILNVTDRE QIKELVSKIEKEYGKIDILVNNAGITKDNIFLRMSEEQWDAVINVNLKGVFNVTQAVAKG MLKKGSGSIITLSSVVGIYGNIGQTNYSATKGGVISMTKTWAKELTRKGAQIRANCVAPG FIETPMTEALSGEVREQMANAVPLKRMGSVEDVANAILFLASDESAYITGQVIEVSGGLV V >gi|224531370|gb|GG658182.1| GENE 116 115250 - 116458 1845 402 aa, chain + ## HITS:1 COG:FN0495 KEGG:ns NR:ns ## COG: FN0495 COG0183 # Protein_GI_number: 19703830 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Fusobacterium nucleatum # 1 402 1 402 402 626 81.0 1e-179 MSKVYIAAAKRTAIGSFLGSLSPLSASDMGAAVAKNILEETKIDPAKLDEVIMGNVLSAG QYQGVGRQTSVKAGIPYEVPGYSVNIICGSGLKSVILTYANIKSGVANLVLAGGTESMSG AGFVLPGQIRGGHKMADLTMKDHMICDALTDAFHKIHMGITAENIAEKYGITREEQDEFA LASQHKAIAAVDSGRFKDEIVPVTIKNKKGDIVVDTDEYPNRKTNLEKLAGLKPAFKKDG SVTAGNASGLNDGASIVLMASEEAVKENNLTPLVEIVGVGTGGVDPLIMGMGPVPAIRKA LKHANLTLKDMDLIELNEAFASQSLGVIKELINEHGVTKEWIAERTNVNGGAIALGHPVG ASGNRILVTLIHEMKKRGSEYGLASLCIGGGMGTAVIVKNVK >gi|224531370|gb|GG658182.1| GENE 117 116544 - 116921 373 125 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315918132|ref|ZP_07914372.1| ## NR: gi|315918132|ref|ZP_07914372.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 125 6 130 130 145 100.0 1e-33 MKKYIMFLQYFLLGFFLYADSYYKEEGVLEDGTRYTKESWTSTKREKTKEKKVEVVKGKK EEIREVDLKFTEDFLKRERENQKKEKENYQNLWKNATKQENNLSESDLEDSVEYFDDFEV GEIEE >gi|224531370|gb|GG658182.1| GENE 118 116918 - 118492 1723 524 aa, chain + ## HITS:1 COG:FN0904 KEGG:ns NR:ns ## COG: FN0904 COG2509 # Protein_GI_number: 19704239 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Fusobacterium nucleatum # 1 522 1 524 527 678 65.0 0 MKIAIHNIVVSIKKNQDLEIQKELQKAGIQKENIKGLSYLKRSIDSRKKQDIKFVYSIEI ELKKEISSSSNAKWQEVKEIIPPKRFPLYPKREIYVVGSGPAGLFAAYRLAEYGYLPIVL ERGESIEERDKTTENFIKTSILNPNSNIQFGEGGAGTYSDGKLNTRVKSEYIENVFQLLV KFGAPEEILWNYKPHVGTDILKIVVKNLREAIIKMGGKFYFNTLLEDIKIQNGELQGFYI QKNGMKEYIAENQLVLAIGHSSRDTYRMLRKHGVAMEAKAFAMGTRMEHPRYEIDKMQYG KEVKNSLLEAATYAVTYNNQSEKRGTFSFCMCPGGVIVNAASQTGGTLVNGMSYSTRDGR FSNSAIVVGIKEHEFGEDIFSGMYFQEKLEKKAYDMIGSYGALYQNVWDFLSHKKTKHEI ETSYQMKKTSCQMEKLFPEVITENLRSALSYWKRNEEFISKNVNLIAPETRTSAPIKILR DVKGESLNVRGLYPIGEGAGYAGGITSAAVDGMKIVDCAFTRVL >gi|224531370|gb|GG658182.1| GENE 119 118531 - 119712 1488 393 aa, chain + ## HITS:1 COG:CAC3299 KEGG:ns NR:ns ## COG: CAC3299 COG1979 # Protein_GI_number: 15896543 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 390 1 386 389 432 54.0 1e-121 MENFNYYIPTKILFGKGKIESLGKEAAKYGKNILMVYGKGSIFKENCYGTSLYEQAKKSL EEANLTIFELPNIDPNPRIESVYAGAKLCREHSIDLVLAIGGGSTIDCAKGIAGQAKYEG DIWKCYETKDPSPIQEVLPIASVLTLSATGSEMNGSSVISNLSCNKKIGLTTSKFRPVFS ILDPSYTFTVNRKQTASGSVDIMSHIFEQYFTPDHGGYLQNRMMEGVLKTVIHYAPIALE EPDNYEARANLMWASTWALNDMFEKGKIPTDWATHQMEHELSAFYDITHGVGLGILTPYW MQYVLSNENQHRFVEYGKEVWNLTGTEEEIAKKSIEKTREFFTSLGIPSHLKEVGIGEEN LEVMAKQATQRRPLGAMKKLYAEDVLAIFKMAL >gi|224531370|gb|GG658182.1| GENE 120 119731 - 120411 1074 226 aa, chain + ## HITS:1 COG:FN0866 KEGG:ns NR:ns ## COG: FN0866 COG0670 # Protein_GI_number: 19704201 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Fusobacterium nucleatum # 6 226 4 224 224 177 52.0 1e-44 MSGMYVDIQKSNSFLRKVFLYMIVGIVLSVVTPISLYFVAPKFLGLALQYYRVLVIVELI AVFTLSFRVYKMSSGTVKTLFVFYSMLNGLTLCTIGFLYDPMIVLYSFGITLSIFTVSAF YGFKTTEDLASYSRFFTIGLVSLILVSLVNLWLGVSSLYWMITVGGTVLFTGLIAYDVNR IRNMSFYLAEEDGEDVEKYAVMGALSLYLDFINLFLYILRFSGKKR >gi|224531370|gb|GG658182.1| GENE 121 120434 - 121270 1010 278 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257466998|ref|ZP_05631309.1| ## NR: gi|257466998|ref|ZP_05631309.1| hypothetical protein FgonA2_06122 [Fusobacterium gonidiaformans ATCC 25563] # 1 278 1 278 278 503 100.0 1e-141 MKRGLYALLFLLASSIGYGTSVFLQESWIEQRGKEQFRDTIIWRERSLEGQSGSNQYVEF ARTTATKDRKENNHWNGHSFFMGTNSNLEKNPNIYLGTSFGFFRGREKSHSYNWNEKTRT YGINAEMAHIKDKNLSLLGLGFTEMRHSPNIDKRYREKEIHIFGELGRLYSYDQIHYLYP FIAFSTQKIEGERVVPSSEVGFRYTRYWTEKLSSKFQTSYGREWTKRRREERYQNQFDFL MGLSYRYYEDLEIQLQYRGKMYKEAYQDFISLGFSHNF >gi|224531370|gb|GG658182.1| GENE 122 121293 - 122084 815 263 aa, chain + ## HITS:1 COG:FN2029 KEGG:ns NR:ns ## COG: FN2029 COG1835 # Protein_GI_number: 19705320 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Fusobacterium nucleatum # 65 262 408 603 604 123 33.0 4e-28 MKKKVITLCGIALFSSGCTSLFWRVPEKEEKADLALLKFSEELELEESLRGQKASIETAT IVETNKQTEEVKLEKTLQTRKEITSLKTEENKQESKKENSKKIEVAVTQRKILFVGDSVM KGSEAQLRKIFPNAIVDSAVSRQFSALPDILHRVEKTQGIPDVVVVHLGSNGNIFEKHML ESMEILGNRKVFFINCKVERPWQESVNHFLKTQVAKYKNTKLVDWYSLAHDQNQYFAKDR IHPNQMGAKVYRAMILEKLEKEL >gi|224531370|gb|GG658182.1| GENE 123 122086 - 123900 1387 604 aa, chain + ## HITS:1 COG:FN2029 KEGG:ns NR:ns ## COG: FN2029 COG1835 # Protein_GI_number: 19705320 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Fusobacterium nucleatum # 3 602 5 601 604 395 40.0 1e-109 MQRERNYGIDVLRGIALILIFTYHYYQFQGTYVGVIIFFALSGYLVTEGLFLEDFNYVSY LKKKFIKLYPLLLFIVALCTLGVFLLEKGLGNTYRYGALSVLFAGNNIYQAFSEISYFES HNDILPLVHTWALSLEIQFYIAYPLLLLACKKWKKNNRETAEIIFLLSSVSALCMFFHYL LGSDLSRIYYGTDTRLFTFLLAGACSSYMRTEKKWCKSIFYTISVIGLIAIVLFSVYFRY DLEWNYLGAFYIISILTTIVTVSCYRFGFLNYKNPFSNLLQSLGIRGYSYYLWQYPIMIF ANEYFKWIKISYHWTVAIQVVILILISELTYRFIEKKNFSFLQVSIFFLLTIFLLIALPK PVRQESQVLEHKIEELANSNIRKEEPILEIQTEKPLLEQENKKEEEDYDSLELFLLGDEK EETAPSSKSMTKELTTVVEKPFHQVQKGVFRKPITFIGDSVMKMCEMDIKKDFPNAYVDA AVSRQFFKLPGILEDAKKKGKLYPIVVIHLGSNGTIQKKSFDKMVQLLDGHQVFLLNCVV SKPWETEVNSLLEQEVAKYPNLHLINWYQYAKGQSSWFYKDATHPKPNGAKKYSHFILKN LENM >gi|224531370|gb|GG658182.1| GENE 124 123946 - 124110 216 54 aa, chain - ## HITS:1 COG:no KEGG:FN1200 NR:ns ## KEGG: FN1200 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 54 208 259 259 68 57.0 6e-11 MLSYNLYKADNKELNLLSGIAYEKLKFKDSQKEMQNFMEHKIAPIYKVGLEYKF >gi|224531370|gb|GG658182.1| GENE 125 124154 - 124528 532 124 aa, chain - ## HITS:1 COG:MA3316 KEGG:ns NR:ns ## COG: MA3316 COG3422 # Protein_GI_number: 20092130 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 58 119 12 73 77 68 53.0 2e-12 MGKFIVKETKTGIKFDLLAKNNEVIATSEVYKAKASCMNGIKSVMTNSAIATIEDQTKEN TPKEKNPKFEVYKDKAGEFRFRLKAKNGQIIATSEGYKAKASCMNGIESVKKNASGAPIE ELNK >gi|224531370|gb|GG658182.1| GENE 126 124737 - 125276 721 179 aa, chain + ## HITS:1 COG:FN0455 KEGG:ns NR:ns ## COG: FN0455 COG1592 # Protein_GI_number: 19703790 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Fusobacterium nucleatum # 1 179 1 179 179 208 63.0 4e-54 MELKGTKTEQNLQTAFAGESMARNKYTYYASKAKKEGYVHIGKLFEETANNEKEHAKIWF KYLHGGAVPTTEQNLLDAAEGENYEWTDMYASFAETAKEEGFNELASLFTMVGKIEKTHE ERYRTLLDNLKSGKVFSREEKEEWECSNCGYIHYGPKAPGLCPVCKHPIDYFMLRPKNY >gi|224531370|gb|GG658182.1| GENE 127 125455 - 127818 3653 787 aa, chain + ## HITS:1 COG:FN0857 KEGG:ns NR:ns ## COG: FN0857 COG0058 # Protein_GI_number: 19704192 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Fusobacterium nucleatum # 1 787 1 787 789 1349 85.0 0 MLFEKEVWKEKLEQRILVKFGTSLEEASSFEIYQALGDTIMESIAKDWYDTKKKYEKKKQ AFYLSSEFLMGRAMGNNLINLGIQQEVIDFLKEIGIDYNQIEDEEEDAALGNGGLGRLAA CFMDSLATLNLPGQGYSIRYKNGIFNQYLRDGFQVEKPETWLRYGDVWSVVRPEDEVIVN FGNTSVRALPYDMPIIGYGTKNINTLRLWEAHAIQDLDLGVFNQQDYLHATQAKTLAEDI SRVLYPNDSTDEGKKLRLRQQYFFVSASLQDIMKKFKKVHGREFEKIPEYIAIQLNDTHP VIAIPELMRLLVDIEGVKWEDAWEIVKRTFSYTNHTILAEALEKWWIGLYQEVVPRIFQI TEGIHNQFRAELTQLYPNDAEKQNRMSIIQGNMIHMAWLAIYGSHKVNGVAELHTEILKE RELKDWYDLYPDKFLNKTNGITQRRWLLKSNPQLSAYITELIGDAWITDLSELKKLEQYL EDEVVLNKLLAIKQEKKEELVKYLRETQGVDINPKSIFDVQVKRMHEYKRQLLNILQVYD LYYYLKENPNVEFTPTTYIYGAKAAPGYKVAKGIIRLINDIAQIINGDNEVNDKLKVVFV ENYRVTVAEKLFPAADISEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAKEAGE ENEYIFGMKVEDIDALQKRGYDPRTPYNSVAGLKRVIDALIDGHLNDLGSGIYREIHSLL MERGDQYYVLEDFEDYRKKQRSINRDYRDQKAWARKMLKNIANAGKFSSDRTIMEYAKEI WGINEVR >gi|224531370|gb|GG658182.1| GENE 128 127824 - 129656 2092 610 aa, chain + ## HITS:1 COG:FN0856 KEGG:ns NR:ns ## COG: FN0856 COG0296 # Protein_GI_number: 19704191 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Fusobacterium nucleatum # 1 609 4 611 611 969 76.0 0 MSGQTDRYLFHRGEHRQAYGYLGAHPSRTSTIFRVWAPNAKSVAVVGDFNSWVARAEDYC KKLNNEGIWEIEIPKLKKGFLYKYQIETVWGERILKADPYGFSSELRPNTASIVTGLPKF RWGDKRWLNKREVGYQRPVNIYEVHLGSWKKQEDGNFYNYREIAKLLVDYLTDMKYTHIE LMPLVEHPLDASWGYQGVGYYSITSRYGSAEDFMYFVNYLHQHGIGVILDWVPGHFCKDA HGLYRFDGGACYEYEDAVLGENEWGSANFNVARNEVRSFLVSNLYFWLKEFHIDGIRMDA ISNMLYYTRDNELHENQRSVEFLQFLNQTVHEEYPDVMLIAEDSSAWPLVTKYPMDGGLG FDGKWNMGWMNDTLKYMEIDPFFRKNHHGKLTFSFMYAFSENFILALSHDEVVHGKKSIL NKMPGYYENKLNHVKTLYAYQMAHPGKKLNFMGNEFAQGLEWRFYEELEWKVLEENKGCQ SIQKYTRALNELYLKEKALWYDGQDGFEWIEHENIEENMLIFLRKTPDMKEVFIAVFNFS GKNQEKYKIGVPFAGGYECLLNSNETRFGGYDIGKKKTYQTIDSSWNYREQHIEVDIAGN TALFLKYRKK >gi|224531370|gb|GG658182.1| GENE 129 129677 - 130822 1488 381 aa, chain + ## HITS:1 COG:FN0855 KEGG:ns NR:ns ## COG: FN0855 COG0448 # Protein_GI_number: 19704190 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Fusobacterium nucleatum # 1 378 3 380 384 670 85.0 0 MKKKRIIAMILAGGQGSRLKELTERIAKPAVSFGGKYRIIDFTLTNCSHSGIDTVGILTQ YKPHALNNHIGRGSPWDLDRMDGGVTVLQPHTKKNDENGWYKGTANAIYRNINFIEEYDP EYVLILSGDHIYKMDYDKMLKYHIKKEADATIGVFEVPLADAPSFGIMNTREDMTIYEFE EKPKEPKSTLASMGIYIFKWKLLKEYLEEDEKDPKSSNDFGKNIIPNMLQDGKKLVAYPF EGYWRDVGTIQSFWDAHMDLLEEENELDLFDKSWRINTRQGIYTPSYITPEAKVQNTLLD KGCLVEGEVKHSVIFSGVKIGKNSKIIDSILMADTEIGDNVIIQKAIIANDVKVLDNTVI GDGKEIVVIGEKRIVKSEPVK >gi|224531370|gb|GG658182.1| GENE 130 130843 - 132006 1423 387 aa, chain + ## HITS:1 COG:FN0854 KEGG:ns NR:ns ## COG: FN0854 COG0448 # Protein_GI_number: 19704189 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Fusobacterium nucleatum # 1 387 1 387 387 621 80.0 1e-178 MIKNYMAIIYLGQGNENISPLTKARSLASIPVGGSYRIIDFALSNVVNAGIRNVGLFCGN EELNSLTDHIGNGSAWDLARKKDGIFIFKQMMDNHSSTGRARIHKNMEYFFRSSQEKVIV LNSHMVCNLDINDLIEKHEASGKEITMVYKKVKDAHEHFNHCSSVKIDENNRVVGIGQNL FFHEEENISLDAFVISKELVLKLLIDSIQDGNYNTLPELVAKKLASLNVNAYEFTGYLQC INSTREYFDFNMKILQREIREDVFGITSGRQILTKVKDTPPSLFKETANVENSLISNGCI IEGSVKNSILSRGAVIEKGVVLEDCVILQDCHIQKGAILKNVIVDKNNVIHEEEKLSASK EYPLVIEKSMNWDSKQYQNLMKYIKTK >gi|224531370|gb|GG658182.1| GENE 131 132017 - 133426 1298 469 aa, chain + ## HITS:1 COG:FN0853 KEGG:ns NR:ns ## COG: FN0853 COG0297 # Protein_GI_number: 19704188 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Fusobacterium nucleatum # 1 458 1 459 461 709 74.0 0 MKVLFATAEAFPFVKTGGLGDVAYSLPKALQKEKIDVRVILPKYSKIKEEFLKQKRHLGH KEIWVAHHNEYVGIETVLYKDVTYYFIDNERYFKRNGIYGEFDDCERFLYFAKAVVETMD ITGFTPDIIHCNDWQTGLIPIYLKERGMQEIKTIFTIHNLRFQGFFFNNVIESLLEIDRY KYYHEDGIKYYDMISFLKAGVVYSDYITTVSESYAEEIKTPELGEGLHGLFQKLDYRLSG VVNGIDEKSYPIPKDSKENLKVKLQKKLGLKIEKDTPLIAMITRLDSQKGIDFVIEKMDE IMSMGVQFILLGTGENRYEDFFRWKESQYSGYLCSYIGFDSDLSLEIYQGADIFLMPSVY EPCGLSQMIAMRYGCIPVVRETGGLRDTVTPYNEYTGEGDGFGFRELNANDMMKTLHYAV QVYQRKQEWSVLIENAKARENSWKASAKKYEIIYQKVLGKFHDVEVIKK >gi|224531370|gb|GG658182.1| GENE 132 133468 - 135387 1205 639 aa, chain - ## HITS:1 COG:FN0799 KEGG:ns NR:ns ## COG: FN0799 COG1523 # Protein_GI_number: 19704134 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Fusobacterium nucleatum # 22 639 22 645 645 831 64.0 0 MYQNIEKTTSFLNFWKINRPQFSLYAKEAKEVSLEFYKTVQDNIPYQIIRLNSQKHKLGD YWYYEDKAIQEGCLYRWNVDGVSILDPLALSYTGNMPVKEKKSIFLLHKQATSKKFSIKD KDRLIYEVHIGFFSKEQTYTTFIDKIPYLKELGINTVEFLPIYEWDDYTGNLHPDSTPIQ NAWGYNPINFFATTKKFSSSKEENSFSEVEEFRNLVEILHKNGIEVLLDVVYNHTAEGGK TGYLHHFKALGEDTFYIKNKDKDFSNFSGCGNSFHCNHTVTKEMIIESLLYWYLEMGVDG FRFDLAPVLGRDSHGQWLQRSLLYDLVEHPILSHATLISESWDLGGYFVGAMPSGWSEWN DSYRDTIRKFIRGDFGQIPDLIKRIFGSIDIFHANKKKYQATINFIACHDGFTMWDVLSY NRKYNFANGEKNQDGNNENYSYNHGEEGETKNPAILKLRIQQMKNMMLLLYISQGIPMLL MGDEIARTQLGNNNAYCQNNKITWMDWSRKDSFQDIFQFTKSMIQLRKTYSIFRKEEYLK MDEEIILHGVKLHQPDYSFHSLSIAFELWDQESDTQFYIALNSYSESLDFELPILKNKKE WYLLTDTSKVETCDFKAEEKITETNYSVISKSSIILVAK >gi|224531370|gb|GG658182.1| GENE 133 135542 - 135859 632 105 aa, chain + ## HITS:1 COG:VC1919 KEGG:ns NR:ns ## COG: VC1919 COG0776 # Protein_GI_number: 15641921 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Vibrio cholerae # 1 91 1 90 90 60 43.0 1e-09 MNKKDFIALFAKNAELKTKTEAEKLVAAFLNTVEETLVAGDGVAFMGFGKFETLVREART CVNPRTKEKMNVAAKKVVRFKAGKALAEKVNVVEKKAKKGSKKSK >gi|224531370|gb|GG658182.1| GENE 134 136022 - 136798 1278 258 aa, chain + ## HITS:1 COG:FN1609 KEGG:ns NR:ns ## COG: FN1609 COG1692 # Protein_GI_number: 19704930 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 257 1 257 263 372 68.0 1e-103 MKILVVGDIVGRPGRKTLKSYLEKEKNQYDFIIVNGENAAAGFGITEKIAVEFLSWGIDI ITGGNHTWDKKEFYDFLRQSNRVIRPCNYPQGVPGVGYSILPSRNGKKVAVLSLQGRVFM PATDCPFQVAEKVMEEIRKETNIIIVDFHAEATSEKIALGWFLDGKVSAVYGTHTHIQTA DEKILPQGTSYITDVGMTGSENGVIGMKVECILPKFLTALPQRFEVAEGKEMLHGISLEI DEETGKTVKIDRIAWREE >gi|224531370|gb|GG658182.1| GENE 135 136795 - 137724 1109 309 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237737638|ref|ZP_04568119.1| ribosomal protein L11 methyltransferase [Fusobacterium mortiferum ATCC 9817] # 1 309 1 309 309 431 67 1e-120 MKVMEVKVIFESDDIQKYQKQISDIFYDFGVTGLQIEEPLEKKNPLDYYKDESSFLMRNH AVSAYFPMNIYAKKRQETLLTVFEEKFGQDEEVVYTVDFYEHQEEDYQNSWKKYLYPEKI SSQFVVKPTWREYEAEEGEKVIELDPGRAFGTGSHPTTSLCVDLMEEGIQEGETVLDVGT GSGILMIVAEKLGAGFVCGVDIDELAVEVANENLELNKVSKEKYKVLHGNLIEKIEKQSY DVVVANILADVLLLLLKDISSVVKTGGKIIFSGIIEDKLEEVIRSVEMTGMRVEKVVAKG EWRALAIRA >gi|224531370|gb|GG658182.1| GENE 136 137734 - 138390 844 218 aa, chain + ## HITS:1 COG:FN1607 KEGG:ns NR:ns ## COG: FN1607 COG0283 # Protein_GI_number: 19704928 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Fusobacterium nucleatum # 1 215 1 215 218 234 60.0 8e-62 MKEFIVALDGPAGSGKSTIAKRIAKQYHFTYVDTGAMYRMITWFFLENNVSWKEEIACQK ALEQVHLDMKNERFFVNGQDVSEAIRGPRVSSYVSEIAALKVVRNQLVHLQRKIAKGKEV ILDGRDIGTVVFPKANLKIFLLASAEERAKRRFLEYEEKGETISYEEVLKSIQERDYIDS TRKESPLRKAEDAIEIDSSTMTIEEVVAEVSKEIESKR >gi|224531370|gb|GG658182.1| GENE 137 138400 - 139629 1220 409 aa, chain + ## HITS:1 COG:FN1606_1 KEGG:ns NR:ns ## COG: FN1606_1 COG1519 # Protein_GI_number: 19704927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Fusobacterium nucleatum # 1 400 1 403 426 362 51.0 1e-100 MYSLLHSFLVKMISLLGKEKQKDFIHKRIFQEYKALPKTIEIWIHASSVGEVNLLERFLL GCLEAFEGEILLTVFTDTGKEAALQKYGKYERVHILYFPLDDKVSIQKILTQISLKNLYI IETELWPNLIRFCKKEARVVVLNGRISNRSFGRYQKIKFLLTPLLQKIDYYYLQTEEDKK RYIALGAKEEYCNIVGNLKFDISMPSYSQEEKEAYRKELKLNTRKLWVAGSTRTGEYEIL LEAFQQLEDYTLVIVPRHLERVPEIESLLKEKKISYQKYTDEEKREDIAVLLVDKMGVLR KLYSIADVTFVGATLVNIGGHSLLEPLAYGKTPIFGPYTQNVKEIAKEILEKKIGYQVVD AKTMLEAIDMIEQQSQEVREKVECFLKENKEVGKKILEREAQWNTKKKK >gi|224531370|gb|GG658182.1| GENE 138 139605 - 140309 760 234 aa, chain + ## HITS:1 COG:FN1606_2 KEGG:ns NR:ns ## COG: FN1606_2 COG0220 # Protein_GI_number: 19704927 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Fusobacterium nucleatum # 21 233 1 213 214 282 68.0 4e-76 MEHKEKEIEELWSYFFKKPRNNYNPYMLRLLDFPDYILFKKKMMDEYKGKWREFFGNENP IFLEIGTGSGNFTKEIAKRNPDQNFIGLELRFKRLCLAASKCQKENLENVVFLRRRGEEL LEFLGKDELSGLYINFPDPWEGNEKNRMIQEKLFLALDSILKVGGILFFKTDHDQYYQDV LDLVKNLENYQVIYHTADLHQSEKAENNIKTEFEHLFLHKHNKNINYIEIQKVK >gi|224531370|gb|GG658182.1| GENE 139 140321 - 141598 2004 425 aa, chain + ## HITS:1 COG:FN1605 KEGG:ns NR:ns ## COG: FN1605 COG0104 # Protein_GI_number: 19704926 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Fusobacterium nucleatum # 1 425 1 425 425 713 83.0 0 MAGYVVVGTQWGDEGKGKIIDVLADRADYVVRFQGGNNAGHTVVVNGEKFILKLLPSGVL HGGTCIIGPGVVVDPKVLLDELASLETRGAKTDHVIISDRAQVIMPYHVKLDELREAKED GLKIGTTKKGIGPCYEDKISRYGIRMADLLDMPQFEEKLKRNVEMKNEIFTKIYGVEPLD YDKILADYKGYIEKIKHRIKDTIPMVNKALDENKLVLFEGAQAMMLDINYGTYPYVTSSS PTTGGVTTGAGVSPRKIDKGIGVMKAYTTRVGEGPFVTELLGEFGEKVRKIGGEYGAVTG RPRRCGWLDLVVGRYATMINGLTDIVITKIDVLSGLGKLKICTAYEIDGEIYESMPANTS LLYRAKPIYEELDGWDEDITKIEKYEDLPENCKKYLKRIEEIVNCKISVVSVGPDRSQNI HIHEI >gi|224531370|gb|GG658182.1| GENE 140 141644 - 142192 663 182 aa, chain - ## HITS:1 COG:FN1085 KEGG:ns NR:ns ## COG: FN1085 COG0693 # Protein_GI_number: 19704420 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Fusobacterium nucleatum # 3 182 2 181 182 211 55.0 8e-55 MKKVFVLLANGFELIEAMTPVDVLRRCGAEVTTVSTEEDLWVESSNSVIIKADKYWEEVN FEEGDILILPGGYPGYVRLRENRLVVSQVEKYLTTGKYVAAICGAPSLFSEHKLALQYRL TGHSSIQEDLKQNHIYTRKTTTVDRNLITGIGAGHSLDFSFEIAALLFEKEVIEKVKEGM EI >gi|224531370|gb|GG658182.1| GENE 141 142211 - 142459 402 82 aa, chain - ## HITS:1 COG:no KEGG:FN1084 NR:ns ## KEGG: FN1084 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 79 4 82 85 110 73.0 2e-23 MFEDWQENLYDSTFDSIFNALVAEYKEGKLDVEELKMNIAEQQQILLNAFTEGEAKSTYC NAMIDAHQFVLSLITTGKIANY >gi|224531370|gb|GG658182.1| GENE 142 142681 - 144930 2612 749 aa, chain + ## HITS:1 COG:FN1704_1 KEGG:ns NR:ns ## COG: FN1704_1 COG1752 # Protein_GI_number: 19705025 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Fusobacterium nucleatum # 7 366 2 374 375 268 43.0 2e-71 MKYIEQKKVFFLLSYCLFSLSTFSISQEEEKEIKNIKEQIAILQKRLEALEEKKAIENSA IEKQKIGLVLSGGGAKGYAHLSLLRFLEKQHIQIDYITGTSIGAFIATLYSIGYSVDEIE ACLNSLNYDSLIKNNAYKRNPHDILTVNYDKQLNFSYPKGLASNEFLYLALKDILKSVEG IRDFNTLPIPLRIIATDLNTGKAKAFHEGDLAQVLTASMAVPTLLEPVKIGDTSYVDGLI SRNFPVQDVIEMGANFVIGSDVGNELKDNSDYNILSVLNQLIAIQSSSSHEEQKELVDIL IQPKIQKYSALDIQKREIFLKLGEEAVQENKEALLSCIKKESKTPKKILSTPAPIFFEKL VLSDNFQGKVRMVIEEFLSDIIGKELKEEELRDKILRVYRLPFISKVYYKKRGNELFLDG EVIPENTLGIGFHYQKDYGTTFRLGTNLHHIGKFGNTTNINAKIGDYLGLDIYSLFHYGI SDEVGLFSRLSYDERPFYLYERNRRLASFKKKIVKGELGIFTRYRDDLFLSAGLSTNYAK LNLESGDTDYRYFEYSKNFNNAFLRFKFDNVRNRKSGLKAEAEYKFSASSVKKNSNVYGP SYQLDGYFPISPKLTGTYHLSGGIMDGNRIPIDQYFKIGGLQNNMELNEFSFYGYRPHQK IADKFMIGNLGLQYEILSNIYWTGNWNMMAYHSPIETLEKTEKKWRRYIHGFASSLMYDS PLGPIELSISRNNQEKEFLTTFSIGYYFY >gi|224531370|gb|GG658182.1| GENE 143 144927 - 145724 1083 265 aa, chain - ## HITS:1 COG:FN1706 KEGG:ns NR:ns ## COG: FN1706 COG0730 # Protein_GI_number: 19705027 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Fusobacterium nucleatum # 16 256 8 248 254 219 54.0 4e-57 MSSMLHWVGDMSPEAFFILSALCFLAAFIDSIAGGGGMISLPAFMAVGLPPHIALGTNKI SAAIGTLASSLNFLRSNKIILPLVTRFAPLALFGAIFGVKTALLIPPKYFQPISFFLLIC VFIYTLINKNLGEEYDYQGINSVNIKWGCIFSLLIGFYDGFLGPGTGSFLIFMLIKIFHL DFAHATATTKFINLASNIISAALYFHAGKLNLPLGLIMAVIMIIGAFAGSSLAIYKGSKF IKPVFLVVTITLIGKMGYSFLSSLF >gi|224531370|gb|GG658182.1| GENE 144 145812 - 147215 355 467 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 160 461 29 344 345 141 32 2e-32 MAWIKKGSYKAVLCFPTFVIKYPRVNQNTFKNMRSILTEQYGYLTCGKRAREFLLPIYFI PGIPILFQSRCRVYEEENLEDEKKQKKFMELIAKKNFWRFEVFTDMENIINLGEYKGKIY KHDYDYLSYDWKREWEYFKIKWRYRGKNMEEFVLQNEKLRVTLLSYGAIIQKIEMPDKNG NWQNIVLGFEKKEEYIEKNIPYFGAIVGRTAGRTKNGILKIGEKEYLLDKNANGKHSIHG GRYNLSQKYWKGEQNENRVLFSVESPHLENGYPGNANIQVEYSLEGDTLHLCYKAFSDED TYFNLTNHSYFSLSGNPEEEIGEQYLTLQAKEYVEVDEDTIATQISSVENTVFDFRIRKQ LKEIFQSQEKQVKIVGGGLDHPFLTQYAKLEDETSGRCLEVKTDNHAMVLYTANWLHEIG RKNHSGIALEAQELPCLSELKEKEYNVGREYERKTSFRFYVDFQKNK >gi|224531370|gb|GG658182.1| GENE 145 147163 - 147261 87 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKEKQVSDFTLIFKKISDIIWGKKEENIEKKK >gi|224531370|gb|GG658182.1| GENE 146 147270 - 149393 198 707 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152975021|ref|YP_001374538.1| 30S ribosomal protein S1 [Bacillus cereus subsp. cytotoxis NVH 391-98] # 518 707 151 353 382 80 29 3e-14 MFDEKTLEMELAGRTLKVSTGKIARQSCGAVMIQYGDTVLLSTVNRSKEPRKGADFFPLT VDYIEKFYAAGKFPGGFNKRESRPSTDATLVARLIDRPIRPMFPEGFTYDVHIVNTVFSF DEQNTPDYLGIIGSSLALSISDIPFLGPVAGVTVGYIDGEFILNPSPEQLEQSLLDLSVA GTKDAVNMVEAGAKELDEETMLKAILFAHDNIKKICAFQEEFVKLCGKEKITFEKEEVDT VISSFIEENGHERLQAAVLTLGKKNREEAVDGLEEELLSAFIEKQYPDVAEEEIPEEPIL AFKKYYHDLMKKLVREAILYKKHRVDGRTTTEIRPLDAQINVLPIPHGSALFTRGETQSL ATATLGTKDDEQLVDNLEKEYYKKFYLHYNFPPYSVGETGRMGAPGRRELGHGSLAERAL RYVIPTEEEFPYTIRVVSDITESNGSSSQASICGGSLALMSAGVPIKEHVAGIAMGLIKE GEEFTVLTDIMGLEDHLGDMDFKVAGTKSGITALQMDIKITGITEEIMRIALSQAHVARQ QILEVMNAAISSPADLKPNVPRIQQITIPKDKIAILIGPGGKNIKGIIEETGSTIDITDD GKVSIFSKDLEVLENTLRLVNNYVKDVELNEVYEGKVVGIQKFGAFMEILPGKEGLLHIS EISKERVANVEDVIKMGDVFKVKVISLDNGKIALSKKKLEMENTVAE >gi|224531370|gb|GG658182.1| GENE 147 149410 - 150744 1029 444 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum acetoxidans DSM 771] # 1 441 19 462 462 400 44 1e-110 MNFALISLGCSKNLVDSENLTGILVNRKGFQLTNEIEEADLVLINTCGFIGDAKKESIET ILEVAEYKQERLKKIVVCGCLAQRYAEELLQEIPEIDAVIGTGEIDKIESVVDEILQDKK AVETSSFHFLPNADTDRVLTTPPHTAYLKISEGCNRRCTYCIIPQLRGDLRSRTKEDILE EAKRLVSGGVRELNLLAQETTEYGIDNYGKKALPDLLRELVKIEGLDWIRTYYMFPRSIT DELIEVMKQEEKICKYFDIPIQHISSNMLRRMGRAITGEQTKELLYKIRKEIPEAVFRTS LIVGFPGETEEEFQELKDFVEEFQFDYIGVFQYSREEDTVAYTMENQIPEEVKERRQAEL INLQNEIAESKNRKLLGREVEVLIDGISSESEYMLEGRLKTQALDIDGKVLTSEGTAQVG EMVRIMLEQNFEYDFIGRIVQNEK >gi|224531370|gb|GG658182.1| GENE 148 150757 - 151311 647 184 aa, chain + ## HITS:1 COG:FN1709 KEGG:ns NR:ns ## COG: FN1709 COG0558 # Protein_GI_number: 19705030 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Fusobacterium nucleatum # 1 182 1 184 187 243 78.0 1e-64 MNLPNQLTTARFILAIPFIYFLQTSDSHGFWYRMIALVIFSVASLTDFFDGYIARKYNLI TDFGKIMDPLADKILVISALVLFVDLNYMPAWMSIVVLAREFLISGIRILAAAKGEVIAA GNLGKYKTTSQMIVVIIALFIGKMSIYILGDYYTICEILMIIPVILTIWSGAEYTAKAKH YFIG >gi|224531370|gb|GG658182.1| GENE 149 151321 - 151593 320 90 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451724|ref|ZP_05617023.1| ## NR: gi|257451724|ref|ZP_05617023.1| YGGT family integral membrane protein [Fusobacterium sp. 3_1_5R] YGGT family integral membrane protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 90 1 90 90 121 100.0 2e-26 MYTILIIVNKLVEVFNILLLIRVVLSWLPMGQNALTRAVYSVTEPILEPIRRTTYPLLGN IPLDISPIIAYFLMQLIRNIVFRIVQVLYF >gi|224531370|gb|GG658182.1| GENE 150 151610 - 152551 1299 313 aa, chain + ## HITS:1 COG:FN1711 KEGG:ns NR:ns ## COG: FN1711 COG0275 # Protein_GI_number: 19705032 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Fusobacterium nucleatum # 1 312 1 312 314 456 74.0 1e-128 MQEIGNEYHIPVLYEETLDQLVWNPDGIYIDCTLGGGSHSEGILKRLSEKGRLISIDQDA NAIAFCKKRLEKHGKQWSVFQNNFENIDIVSYLAGVDKVDGILMDIGVSSTQLDDGERGF SYRYDAKLDMRMNKEQDLSAYEVVNTYAEQDLVRILFEYGEERHAKKIASFICENRKEKP IETTGELVAIIKRAYSERASKHPAKKTFQAIRIEVNRELEVLEKAIQKSVDLLKPKGHLA IITFHSLEDRLVKTVFKDLATACKCPPELPVCVCGGKAKVKILTKKPIIPSEDELGKNNR AHSSKLRVVERLA >gi|224531370|gb|GG658182.1| GENE 151 152548 - 152808 415 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451726|ref|ZP_05617025.1| ## NR: gi|257451726|ref|ZP_05617025.1| hypothetical protein F3_01584 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_06267 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 86 1 86 86 140 100.0 4e-32 MKKAFILVGVIVGIIWGIHGYFLMQVMSLEQELHDKKTELDNNIKLLNRKVMEYDKKLDL AAIKKNMEENRGMLMAEEIKYFEVSE >gi|224531370|gb|GG658182.1| GENE 152 152819 - 154189 1331 456 aa, chain + ## HITS:1 COG:FN1713 KEGG:ns NR:ns ## COG: FN1713 COG2265 # Protein_GI_number: 19705034 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Fusobacterium nucleatum # 1 450 13 462 464 513 60.0 1e-145 MVKLSQKIELTIDKIVFGGEGLGYFQEFAIFVPMATIGDVVEAEVISVKKHYARALISKI IKVGKDRVEGNRISFEEFQGCDFAMAKYEAQLQYKTAMVKEVMERIGKLNSNLVLDCIAS PEEKHYRNKVIEPFSKHKGKIITGFFQRRSHEVFEVEENMLNSKLGNKIIETFKQYANQE KLSVYDEKKHQGLLRNIMIRTNSSQEAMLVLIVNAKKIEESLKKILLQMPKNIPELKSIY LSLNTRKTNVVLGDKNICIWGEKTLKEELFGIHFHISPTSFFQINVPQTKHLYEKALSLI PKIENKNVVDAYSGTGTIGMLLSRKAKKVYAIEIVESASRDGAKTAKENHIDNIEFICGP VEVELDRLLEEGKNLDAIVFDPPRKGIEKSILRKVAEVGIPEMVYISCNPSTLARDLKIM AECGYQVGEIQPFDMFPQTSHVESVVLMSRNPEEKH >gi|224531370|gb|GG658182.1| GENE 153 154367 - 155137 443 256 aa, chain + ## HITS:1 COG:no KEGG:Sterm_4171 NR:ns ## KEGG: Sterm_4171 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 245 1 231 235 103 33.0 1e-20 MAKYAYRDKDRKHIIYSDEAIEEDRNTAFFCPNHMCNAKLYICAVNGSKSAYFRATKSDF KHIKNCPFGNSSTEFDSNKYDESKFVYEDAINNLLCNTKLSSKKTLSSAHGTGEPSAHPP KTLRQIYSLCKSFPVGNVYAGKEIGSMILDDRSEYRYPKGCFGYKIIEATVDGKLYDDKK KEVYLVSPINSKKYTFILSFLDEDNYKKIRSEIYNNRDKIIVIAGEWESSGEYNKFTSKV YGKKQVAIIKSRSVNK >gi|224531370|gb|GG658182.1| GENE 154 155413 - 155677 251 88 aa, chain + ## HITS:1 COG:FN0473 KEGG:ns NR:ns ## COG: FN0473 COG1309 # Protein_GI_number: 19703808 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 86 1 85 189 78 51.0 4e-15 MAQVLKEEVRNRILEAAEKVFYKKDYRGAKLTEIAKEADIPVALIYTYFKNKAVLFDAVV SSVYINFESAFNEEESLEKGSASERFDE Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:01:57 2011 Seq name: gi|224531369|gb|GG658183.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.5, whole genome shotgun sequence Length of sequence - 141367 bp Number of predicted genes - 182, with homology - 173 Number of transcription units - 58, operones - 33 average op.length - 4.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 61 - 483 425 ## FN1229 hypothetical protein 2 1 Op 2 . + CDS 502 - 2262 2138 ## COG1032 Fe-S oxidoreductase 3 1 Op 3 1/0.000 + CDS 2275 - 2946 863 ## COG0692 Uracil DNA glycosylase 4 1 Op 4 1/0.000 + CDS 2958 - 4397 1836 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 5 1 Op 5 . + CDS 4399 - 5238 1140 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase + Term 5249 - 5298 8.4 + Prom 5262 - 5321 3.7 6 2 Tu 1 . + CDS 5372 - 5518 279 ## gi|315918173|ref|ZP_07914413.1| predicted protein + Term 5521 - 5553 3.2 - Term 5509 - 5541 3.2 7 3 Op 1 4/0.000 - CDS 5546 - 6370 1327 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 8 3 Op 2 2/0.000 - CDS 6371 - 7063 819 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 9 3 Op 3 . - CDS 7060 - 8259 1501 ## COG1840 ABC-type Fe3+ transport system, periplasmic component - Prom 8288 - 8347 6.8 - Term 8330 - 8377 11.5 10 4 Tu 1 . - CDS 8397 - 8621 266 ## gi|257467040|ref|ZP_05631351.1| hypothetical protein FgonA2_06334 - Prom 8673 - 8732 15.9 + Prom 8668 - 8727 19.3 11 5 Op 1 . + CDS 8796 - 9443 997 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 12 5 Op 2 . + CDS 9453 - 10313 892 ## COG0384 Predicted epimerase, PhzC/PhzF homolog 13 5 Op 3 . + CDS 10313 - 11023 713 ## COG4912 Predicted DNA alkylation repair enzyme + Prom 11097 - 11156 15.0 14 6 Op 1 . + CDS 11187 - 11249 99 ## 15 6 Op 2 . + CDS 11300 - 11737 423 ## COG3600 Uncharacterized phage-associated protein 16 6 Op 3 . + CDS 11737 - 12579 798 ## gi|257467045|ref|ZP_05631356.1| hypothetical protein FgonA2_06359 + Term 12585 - 12618 2.1 - Term 12573 - 12606 1.3 17 7 Tu 1 . - CDS 12608 - 14032 1033 ## Ilyop_1066 resolvase domain protein - Prom 14103 - 14162 4.9 18 8 Op 1 . - CDS 14164 - 14349 253 ## gi|257467047|ref|ZP_05631358.1| hypothetical protein FgonA2_06369 19 8 Op 2 . - CDS 14367 - 14705 293 ## gi|257467048|ref|ZP_05631359.1| hypothetical protein FgonA2_06374 20 8 Op 3 . - CDS 14716 - 15165 424 ## MCCL_1951 chromosome partitioning protein ParA homolog 21 8 Op 4 . - CDS 15168 - 15380 262 ## gi|257467050|ref|ZP_05631361.1| hypothetical protein FgonA2_06384 22 8 Op 5 . - CDS 15373 - 16551 1306 ## gi|257467051|ref|ZP_05631362.1| hypothetical protein FgonA2_06389 - Prom 16594 - 16653 4.8 + Prom 16556 - 16615 8.2 23 9 Op 1 . + CDS 16644 - 17261 445 ## gi|257467052|ref|ZP_05631363.1| hypothetical protein FgonA2_06394 24 9 Op 2 . + CDS 17287 - 17391 93 ## - Term 17336 - 17387 1.1 25 10 Op 1 . - CDS 17431 - 17667 139 ## gi|315918189|ref|ZP_07914429.1| predicted protein 26 10 Op 2 . - CDS 17660 - 17755 172 ## - Prom 17790 - 17849 4.4 27 11 Tu 1 . - CDS 17912 - 18145 251 ## gi|257467056|ref|ZP_05631367.1| hypothetical protein FgonA2_06414 - Prom 18215 - 18274 6.5 + Prom 18190 - 18249 7.7 28 12 Tu 1 . + CDS 18341 - 18499 176 ## + Term 18544 - 18584 -0.9 29 13 Op 1 . - CDS 18450 - 18644 247 ## gi|257467058|ref|ZP_05631369.1| hypothetical protein FgonA2_06424 30 13 Op 2 . - CDS 18656 - 18883 56 ## gi|257467059|ref|ZP_05631370.1| hypothetical protein FgonA2_06429 - Prom 19067 - 19126 8.2 + Prom 18856 - 18915 11.0 31 14 Op 1 . + CDS 19118 - 19342 230 ## Sterm_0816 XRE family transcriptional regulator + Term 19363 - 19416 -0.5 + Prom 19408 - 19467 7.7 32 14 Op 2 . + CDS 19488 - 20198 665 ## Mmar10_0570 hypothetical protein - Term 19918 - 19988 3.3 33 15 Tu 1 . - CDS 20188 - 20370 318 ## gi|315918196|ref|ZP_07914436.1| predicted protein 34 16 Tu 1 . + CDS 20620 - 20685 70 ## 35 17 Tu 1 . - CDS 21090 - 21290 287 ## gi|257467065|ref|ZP_05631376.1| hypothetical protein FgonA2_06459 - Prom 21346 - 21405 7.8 + Prom 21268 - 21327 8.2 36 18 Op 1 . + CDS 21357 - 21560 236 ## gi|257467066|ref|ZP_05631377.1| hypothetical protein FgonA2_06464 37 18 Op 2 . + CDS 21631 - 22242 496 ## gi|257467067|ref|ZP_05631378.1| hypothetical protein FgonA2_06469 38 18 Op 3 . + CDS 22246 - 22416 266 ## + Term 22448 - 22490 8.1 + Prom 22524 - 22583 8.4 39 19 Op 1 . + CDS 22630 - 23388 925 ## COG2932 Predicted transcriptional regulator 40 19 Op 2 . + CDS 23404 - 24381 583 ## LCRIS_01524 hypothetical protein + Term 24413 - 24451 1.4 + Prom 24431 - 24490 11.0 41 20 Op 1 . + CDS 24575 - 24793 244 ## gi|257467071|ref|ZP_05631382.1| hypothetical protein FgonA2_06489 42 20 Op 2 . + CDS 24824 - 25036 193 ## gi|257467072|ref|ZP_05631383.1| hypothetical protein FgonA2_06494 43 20 Op 3 . + CDS 25026 - 25244 118 ## gi|257467073|ref|ZP_05631384.1| hypothetical protein FgonA2_06499 44 20 Op 4 . + CDS 25232 - 26314 314 ## gi|257467074|ref|ZP_05631385.1| hypothetical protein FgonA2_06504 + Term 26327 - 26375 -0.8 + Prom 26317 - 26376 6.4 45 21 Op 1 . + CDS 26453 - 26704 277 ## gi|315918208|ref|ZP_07914448.1| predicted protein 46 21 Op 2 . + CDS 26751 - 27206 140 ## COG0863 DNA modification methylase 47 21 Op 3 . + CDS 27164 - 27367 295 ## Ilyop_1048 DNA methylase N-4/N-6 domain protein 48 21 Op 4 . + CDS 27382 - 28050 803 ## gi|257467078|ref|ZP_05631389.1| hypothetical protein FgonA2_06524 + Prom 28096 - 28155 4.6 49 22 Op 1 . + CDS 28177 - 28620 567 ## Ilyop_1045 hypothetical protein 50 22 Op 2 . + CDS 28607 - 30379 1905 ## COG5525 Bacteriophage tail assembly protein 51 22 Op 3 . + CDS 30376 - 30594 287 ## gi|257467081|ref|ZP_05631392.1| hypothetical protein FgonA2_06539 52 22 Op 4 4/0.000 + CDS 30604 - 32145 1477 ## COG5511 Bacteriophage capsid protein 53 22 Op 5 . + CDS 32132 - 33247 1468 ## COG0740 Protease subunit of ATP-dependent Clp proteases 54 22 Op 6 . + CDS 33265 - 33585 588 ## gi|257467084|ref|ZP_05631395.1| hypothetical protein FgonA2_06554 55 22 Op 7 . + CDS 33598 - 34605 1186 ## Ilyop_1947 hypothetical protein 56 22 Op 8 . + CDS 34632 - 34865 332 ## gi|257467086|ref|ZP_05631397.1| hypothetical protein FgonA2_06564 57 22 Op 9 . + CDS 34862 - 35176 350 ## gi|257467087|ref|ZP_05631398.1| hypothetical protein FgonA2_06569 58 22 Op 10 . + CDS 35176 - 35766 790 ## Dred_1209 hypothetical protein 59 22 Op 11 . + CDS 35763 - 36230 565 ## gi|257467089|ref|ZP_05631400.1| hypothetical protein FgonA2_06579 60 22 Op 12 . + CDS 36271 - 36486 233 ## gi|257467090|ref|ZP_05631401.1| hypothetical protein FgonA2_06584 61 22 Op 13 . + CDS 36487 - 37887 1674 ## COG3497 Phage tail sheath protein FI 62 22 Op 14 . + CDS 37897 - 38430 569 ## Spro_4913 major tail tube protein 63 22 Op 15 . + CDS 38440 - 38775 441 ## gi|257467093|ref|ZP_05631404.1| hypothetical protein FgonA2_06599 64 22 Op 16 . + CDS 38814 - 38888 81 ## 65 22 Op 17 . + CDS 38950 - 39213 281 ## gi|257467094|ref|ZP_05631405.1| hypothetical protein FgonA2_06604 + Term 39235 - 39272 4.0 66 23 Op 1 . + CDS 39281 - 41866 2324 ## COG5283 Phage-related tail protein 67 23 Op 2 . + CDS 41856 - 42065 151 ## gi|315918229|ref|ZP_07914469.1| predicted protein 68 23 Op 3 1/0.000 + CDS 42068 - 43144 782 ## COG3500 Phage protein D 69 23 Op 4 . + CDS 43144 - 43659 509 ## COG4540 Phage P2 baseplate assembly protein gpV 70 23 Op 5 . + CDS 43661 - 44047 388 ## Dred_1218 hypothetical protein 71 23 Op 6 . + CDS 44047 - 44358 369 ## gi|257467101|ref|ZP_05631412.1| hypothetical protein FgonA2_06639 72 23 Op 7 . + CDS 44355 - 45455 1122 ## COG3948 Phage-related baseplate assembly protein 73 23 Op 8 . + CDS 45448 - 46011 462 ## Sterm_2510 hypothetical protein 74 23 Op 9 . + CDS 46016 - 47311 817 ## gi|257467104|ref|ZP_05631415.1| hypothetical protein FgonA2_06654 + Prom 47351 - 47410 5.9 75 24 Op 1 . + CDS 47513 - 48187 628 ## gi|257467105|ref|ZP_05631416.1| hypothetical protein FgonA2_06659 76 24 Op 2 . + CDS 48259 - 48723 418 ## Sterm_2506 hypothetical protein + Term 48734 - 48774 -0.5 + Prom 48733 - 48792 9.8 77 25 Op 1 . + CDS 48813 - 49196 339 ## gi|257467107|ref|ZP_05631418.1| hypothetical protein FgonA2_06669 78 25 Op 2 . + CDS 49183 - 49635 285 ## Dde_1881 hypothetical protein + Prom 49656 - 49715 8.8 79 26 Tu 1 . + CDS 49820 - 50122 255 ## COG4824 Phage-related holin (Lysis protein) + Term 50124 - 50159 4.4 + Prom 50145 - 50204 16.0 80 27 Op 1 2/0.000 + CDS 50280 - 51374 1091 ## COG0464 ATPases of the AAA+ class 81 27 Op 2 . + CDS 51375 - 53711 1693 ## COG1404 Subtilisin-like serine proteases + Term 53714 - 53754 2.7 - TRNA 53982 - 54058 77.6 # Arg ACG 0 0 + Prom 54129 - 54188 10.2 82 28 Tu 1 . + CDS 54217 - 54600 481 ## gi|257467112|ref|ZP_05631423.1| hypothetical protein FgonA2_06694 + Term 54620 - 54672 9.7 + Prom 54630 - 54689 7.5 83 29 Op 1 . + CDS 54717 - 55616 1053 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 84 29 Op 2 9/0.000 + CDS 55626 - 57299 1815 ## COG3275 Putative regulator of cell autolysis 85 29 Op 3 . + CDS 57296 - 58000 828 ## COG3279 Response regulator of the LytR/AlgR family + Prom 58039 - 58098 7.6 86 30 Tu 1 . + CDS 58128 - 59561 2163 ## COG1966 Carbon starvation protein, predicted membrane protein + Term 59587 - 59623 7.5 + Prom 59610 - 59669 7.2 87 31 Op 1 59/0.000 + CDS 59753 - 60187 694 ## PROTEIN SUPPORTED gi|237736380|ref|ZP_04566861.1| ribosomal protein L13 88 31 Op 2 . + CDS 60204 - 60602 576 ## PROTEIN SUPPORTED gi|237736381|ref|ZP_04566862.1| SSU ribosomal protein S9P + Term 60631 - 60666 5.3 + Prom 60642 - 60701 12.0 89 32 Tu 1 . + CDS 60732 - 61676 1279 ## COG2066 Glutaminase + Term 61693 - 61744 7.2 90 33 Tu 1 . - CDS 61737 - 63842 2186 ## COG3968 Uncharacterized protein related to glutamine synthetase - Prom 63951 - 64010 7.8 + Prom 63912 - 63971 8.5 91 34 Op 1 1/0.000 + CDS 63999 - 64268 475 ## COG1925 Phosphotransferase system, HPr-related proteins 92 34 Op 2 4/0.000 + CDS 64258 - 65133 835 ## PROTEIN SUPPORTED gi|34762725|ref|ZP_00143715.1| LytB protein; SSU ribosomal protein S1P 93 34 Op 3 . + CDS 65126 - 66763 1748 ## PROTEIN SUPPORTED gi|34762725|ref|ZP_00143715.1| LytB protein; SSU ribosomal protein S1P + Term 66779 - 66810 3.4 94 35 Tu 1 . + CDS 66817 - 67299 481 ## COG2131 Deoxycytidylate deaminase - Term 67183 - 67235 5.1 95 36 Tu 1 . - CDS 67296 - 67538 198 ## gi|257467125|ref|ZP_05631436.1| hypothetical protein FgonA2_06759 - Prom 67568 - 67627 10.8 + Prom 67474 - 67533 9.8 96 37 Tu 1 . + CDS 67614 - 68216 798 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 68217 - 68250 1.0 - Term 68203 - 68237 1.2 97 38 Tu 1 . - CDS 68243 - 68599 428 ## gi|257453278|ref|ZP_05618577.1| hypothetical protein F3_09468 - Prom 68673 - 68732 4.8 + Prom 68682 - 68741 3.3 98 39 Op 1 . + CDS 68763 - 69455 503 ## COG0101 Pseudouridylate synthase 99 39 Op 2 . + CDS 69468 - 69920 662 ## COG0456 Acetyltransferases 100 39 Op 3 . + CDS 69923 - 70033 69 ## 101 39 Op 4 . + CDS 70017 - 70442 601 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 102 39 Op 5 . + CDS 70463 - 70846 644 ## COG2033 Desulfoferrodoxin + Term 70879 - 70924 9.4 + Prom 70849 - 70908 2.5 103 40 Op 1 . + CDS 70933 - 71379 601 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase 104 40 Op 2 40/0.000 + CDS 71455 - 71766 469 ## PROTEIN SUPPORTED gi|237736169|ref|ZP_04566650.1| SSU ribosomal protein S10P + Term 71853 - 71892 1.4 + Prom 71776 - 71835 4.8 105 40 Op 3 58/0.000 + CDS 71917 - 72543 992 ## PROTEIN SUPPORTED gi|237742672|ref|ZP_04573153.1| LSU ribosomal protein L3P 106 40 Op 4 61/0.000 + CDS 72572 - 73204 918 ## PROTEIN SUPPORTED gi|237736171|ref|ZP_04566652.1| LSU ribosomal protein L1E 107 40 Op 5 61/0.000 + CDS 73206 - 73493 390 ## PROTEIN SUPPORTED gi|237736172|ref|ZP_04566653.1| LSU ribosomal protein L23P 108 40 Op 6 60/0.000 + CDS 73537 - 74367 1384 ## PROTEIN SUPPORTED gi|237742669|ref|ZP_04573150.1| LSU ribosomal protein L2P 109 40 Op 7 59/0.000 + CDS 74391 - 74666 468 ## PROTEIN SUPPORTED gi|19704962|ref|NP_602457.1| SSU ribosomal protein S19P 110 40 Op 8 61/0.000 + CDS 74718 - 75050 508 ## PROTEIN SUPPORTED gi|237736175|ref|ZP_04566656.1| LSU ribosomal protein L22P 111 40 Op 9 50/0.000 + CDS 75073 - 75729 979 ## PROTEIN SUPPORTED gi|237736176|ref|ZP_04566657.1| SSU ribosomal protein S3P 112 40 Op 10 50/0.000 + CDS 75732 - 76157 675 ## PROTEIN SUPPORTED gi|34764031|ref|ZP_00144917.1| LSU ribosomal protein L16P 113 40 Op 11 50/0.000 + CDS 76157 - 76339 291 ## PROTEIN SUPPORTED gi|34764030|ref|ZP_00144916.1| LSU ribosomal protein L29P 114 40 Op 12 50/0.000 + CDS 76381 - 76632 385 ## PROTEIN SUPPORTED gi|237739375|ref|ZP_04569856.1| SSU ribosomal protein S17P 115 40 Op 13 57/0.000 + CDS 76666 - 77034 576 ## PROTEIN SUPPORTED gi|237736180|ref|ZP_04566661.1| LSU ribosomal protein L14P 116 40 Op 14 48/0.000 + CDS 77057 - 77398 486 ## PROTEIN SUPPORTED gi|34764027|ref|ZP_00144913.1| LSU ribosomal protein L24P 117 40 Op 15 50/0.000 + CDS 77417 - 77968 868 ## PROTEIN SUPPORTED gi|237739378|ref|ZP_04569859.1| LSU ribosomal protein L5P 118 40 Op 16 50/0.000 + CDS 77990 - 78277 451 ## PROTEIN SUPPORTED gi|237743912|ref|ZP_04574393.1| SSU ribosomal protein S14P 119 40 Op 17 55/0.000 + CDS 78306 - 78701 612 ## PROTEIN SUPPORTED gi|237736184|ref|ZP_04566665.1| SSU ribosomal protein S8P 120 40 Op 18 46/0.000 + CDS 78725 - 79258 744 ## PROTEIN SUPPORTED gi|237743914|ref|ZP_04574395.1| LSU ribosomal protein L6P 121 40 Op 19 56/0.000 + CDS 79285 - 79647 485 ## PROTEIN SUPPORTED gi|237736186|ref|ZP_04566667.1| LSU ribosomal protein L18P 122 40 Op 20 50/0.000 + CDS 79674 - 80177 757 ## PROTEIN SUPPORTED gi|237736187|ref|ZP_04566668.1| SSU ribosomal protein S5P 123 40 Op 21 48/0.000 + CDS 80192 - 80377 273 ## PROTEIN SUPPORTED gi|237743917|ref|ZP_04574398.1| LSU ribosomal protein L30P 124 40 Op 22 53/0.000 + CDS 80377 - 80859 627 ## PROTEIN SUPPORTED gi|237736189|ref|ZP_04566670.1| LSU ribosomal protein L15P 125 40 Op 23 . + CDS 80898 - 82178 902 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 + Term 82183 - 82226 5.4 + Prom 82211 - 82270 8.5 126 41 Tu 1 . + CDS 82452 - 84077 2194 ## COG5295 Autotransporter adhesin + Term 84086 - 84125 6.8 + Prom 84085 - 84144 4.7 127 42 Op 1 12/0.000 + CDS 84171 - 84803 998 ## COG0563 Adenylate kinase and related kinases 128 42 Op 2 9/0.000 + CDS 84825 - 85583 1376 ## COG0024 Methionine aminopeptidase + Term 85615 - 85655 -1.0 + Prom 85585 - 85644 5.3 129 42 Op 3 . + CDS 85664 - 85885 266 ## PROTEIN SUPPORTED gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 130 42 Op 4 . + CDS 85906 - 86019 199 ## PROTEIN SUPPORTED gi|237736194|ref|ZP_04566675.1| 50S ribosomal protein L36 + Prom 86033 - 86092 2.0 131 43 Op 1 48/0.000 + CDS 86212 - 86568 576 ## PROTEIN SUPPORTED gi|237739948|ref|ZP_04570429.1| SSU ribosomal protein S13P 132 43 Op 2 36/0.000 + CDS 86600 - 86989 632 ## PROTEIN SUPPORTED gi|19704620|ref|NP_604182.1| 30S ribosomal protein S11 133 43 Op 3 26/0.000 + CDS 87039 - 87626 905 ## PROTEIN SUPPORTED gi|237744174|ref|ZP_04574655.1| SSU ribosomal protein S4P 134 43 Op 4 50/0.000 + CDS 87654 - 88634 1354 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 135 43 Op 5 . + CDS 88657 - 89007 547 ## PROTEIN SUPPORTED gi|237739944|ref|ZP_04570425.1| LSU ribosomal protein L17P + Term 89050 - 89091 7.3 + Prom 89084 - 89143 13.5 136 44 Tu 1 . + CDS 89322 - 90128 1253 ## gi|257467165|ref|ZP_05631476.1| hypothetical protein FgonA2_06959 + Prom 91004 - 91063 80.4 137 45 Op 1 . + CDS 91209 - 92378 1752 ## COG5295 Autotransporter adhesin + Term 92424 - 92484 9.2 + Prom 92573 - 92632 7.1 138 45 Op 2 . + CDS 92701 - 93246 638 ## Ilyop_0484 transcriptional regulator, TetR family 139 45 Op 3 . + CDS 93271 - 93810 504 ## COG1309 Transcriptional regulator 140 45 Op 4 . + CDS 93853 - 94404 553 ## COG0262 Dihydrofolate reductase 141 45 Op 5 . + CDS 94417 - 95640 1233 ## COG1301 Na+/H+-dicarboxylate symporters + Term 95730 - 95764 -0.9 - Term 95638 - 95669 3.4 142 46 Tu 1 . - CDS 95684 - 95887 426 ## COG1278 Cold shock proteins - Prom 96064 - 96123 10.8 + Prom 95919 - 95978 8.4 143 47 Op 1 . + CDS 96118 - 96933 1140 ## COG0668 Small-conductance mechanosensitive channel 144 47 Op 2 1/0.000 + CDS 96955 - 98415 2442 ## COG0516 IMP dehydrogenase/GMP reductase 145 47 Op 3 . + CDS 98426 - 99175 1046 ## COG2849 Uncharacterized protein conserved in bacteria 146 47 Op 4 . + CDS 99187 - 99642 573 ## NT01CX_0673 hypothetical protein + Term 99651 - 99693 5.1 + Prom 99682 - 99741 10.0 147 48 Op 1 21/0.000 + CDS 99799 - 100812 1185 ## COG1420 Transcriptional regulator of heat shock gene 148 48 Op 2 29/0.000 + CDS 100809 - 101369 936 ## COG0576 Molecular chaperone GrpE (heat shock protein) 149 48 Op 3 . + CDS 101407 - 103224 3013 ## COG0443 Molecular chaperone + Term 103239 - 103281 9.8 + Prom 103265 - 103324 15.7 150 49 Tu 1 . + CDS 103405 - 108183 5638 ## COG5295 Autotransporter adhesin + Prom 109669 - 109728 80.4 151 50 Tu 1 . + CDS 109834 - 110721 1203 ## COG5295 Autotransporter adhesin + Prom 111191 - 111250 80.4 152 51 Op 1 . + CDS 111390 - 112397 1292 ## Acfer_0035 S-layer domain protein 153 51 Op 2 . + CDS 112413 - 112478 84 ## 154 51 Op 3 . + CDS 112487 - 113092 984 ## gi|257453228|ref|ZP_05618527.1| hypothetical protein F3_09218 + Term 113177 - 113222 8.3 155 52 Tu 1 . - CDS 113481 - 114041 580 ## COG3758 Uncharacterized protein conserved in bacteria - Prom 114068 - 114127 8.0 + Prom 114103 - 114162 11.0 156 53 Tu 1 . + CDS 114229 - 114750 799 ## COG1778 Low specificity phosphatase (HAD superfamily) + Prom 114767 - 114826 6.2 157 54 Op 1 . + CDS 114873 - 116024 1473 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 158 54 Op 2 1/0.000 + CDS 116091 - 116351 381 ## COG1862 Preprotein translocase subunit YajC + Term 116362 - 116401 6.3 159 54 Op 3 . + CDS 116410 - 117417 1265 ## COG0860 N-acetylmuramoyl-L-alanine amidase 160 54 Op 4 . + CDS 117435 - 117845 529 ## gi|257467188|ref|ZP_05631499.1| hypothetical protein FgonA2_07076 161 54 Op 5 1/0.000 + CDS 117847 - 118419 680 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism 162 54 Op 6 10/0.000 + CDS 118374 - 120353 1247 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 163 54 Op 7 . + CDS 120364 - 120810 540 ## COG0691 tmRNA-binding protein 164 54 Op 8 . + CDS 120819 - 124175 3318 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 165 55 Op 1 38/0.000 + CDS 124303 - 125046 1098 ## PROTEIN SUPPORTED gi|237743354|ref|ZP_04573835.1| SSU ribosomal protein S2P 166 55 Op 2 24/0.000 + CDS 125079 - 125972 537 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 125973 - 126026 8.1 167 55 Op 3 33/0.000 + CDS 126045 - 126764 1074 ## COG0528 Uridylate kinase 168 55 Op 4 . + CDS 126782 - 127351 903 ## COG0233 Ribosome recycling factor + Term 127359 - 127396 3.6 - Term 127342 - 127389 2.2 169 56 Tu 1 . - CDS 127393 - 127821 460 ## COG0716 Flavodoxins - Prom 127841 - 127900 10.1 + Prom 127799 - 127858 7.1 170 57 Op 1 32/0.000 + CDS 127957 - 128649 729 ## COG0020 Undecaprenyl pyrophosphate synthase 171 57 Op 2 15/0.000 + CDS 128639 - 129463 934 ## COG0575 CDP-diglyceride synthetase 172 57 Op 3 1/0.000 + CDS 129460 - 130614 1284 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 173 57 Op 4 1/0.000 + CDS 130596 - 131264 913 ## COG0125 Thymidylate kinase 174 57 Op 5 1/0.000 + CDS 131261 - 132262 1028 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 + Prom 132271 - 132330 3.5 175 57 Op 6 1/0.000 + CDS 132360 - 133745 1716 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 176 57 Op 7 1/0.000 + CDS 133761 - 135410 2212 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 135434 - 135483 12.2 + Prom 135442 - 135501 10.9 177 58 Op 1 . + CDS 135531 - 137357 1918 ## COG0358 DNA primase (bacterial type) 178 58 Op 2 . + CDS 137367 - 137594 313 ## gi|257453204|ref|ZP_05618503.1| RNA polymerase sigma factor rpoD 179 58 Op 3 . + CDS 137618 - 138676 1483 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 180 58 Op 4 . + CDS 138718 - 139593 1165 ## gi|257467208|ref|ZP_05631519.1| hypothetical protein FgonA2_07176 181 58 Op 5 . + CDS 139590 - 140366 860 ## COG0327 Uncharacterized conserved protein 182 58 Op 6 . + CDS 140377 - 140949 814 ## FN1315 hypothetical protein + Term 141100 - 141130 -0.5 Predicted protein(s) >gi|224531369|gb|GG658183.1| GENE 1 61 - 483 425 140 aa, chain + ## HITS:1 COG:no KEGG:FN1229 NR:ns ## KEGG: FN1229 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 140 7 146 146 106 47.0 3e-22 MLRARLKQAYVYFFIPWTTKKEQEVQNFLSEEEFFIFSTMGRYDKNHSYFLWRKVIKSEL RYLEIYQKLALLHDCGKEKKGFLARCLTVILGRKRMKDFHSERAYEKLKNRNLELAELCQ KHHQRATTKEMELFQKLDDE >gi|224531369|gb|GG658183.1| GENE 2 502 - 2262 2138 586 aa, chain + ## HITS:1 COG:CAC1254 KEGG:ns NR:ns ## COG: CAC1254 COG1032 # Protein_GI_number: 15894536 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 6 583 5 614 622 501 42.0 1e-141 MTQVNIDNYLLEILKPGQYLGNEINSIHKKEYQTHMCLFFPDIYEVGMSNLGIRILYNIL NKLEGFYLERGFCPMEDLEEKMREHQIPMFSWETKTPLKEFDIVGFSLSYEMAYPNLLNA LDLAGIPFRWKDRGEEYPLLMAGGTCMMNPTVISPFMDYIVIGDGEDVMPEITRIMMRNQ GKTKVEKLQAIQHLDGVWIPRFHKEGEKVKRAIVEDLNDTSYYAEQIVPYIEVVHDRATV EIQRGCSRGCRFCQAGIVYRPVRERSLEKNLELIEKMIQDTGYSEVSLSSLSSSDYSNIH QLIAGIKANPLNKNVGVSLPSLRMNPDSVRVAESISGGKRTGFTFAPEAGSQRMRDIINK GVTEEEILATAEEAVRAGWDNLKFYFMIGLPFETKEDVLAIHELAKKVMFKCRPISRRVQ VTVSVSNFVPKPHTPFAWQKQMGFEEMYDKHSLLREAFKGFKGVSLKIHDPKKSYLEGFL SRGDERISDLVELAFHKGVKLDDYRDNFELWKAAMDELGIQEEKYLGERSLDTVFPWDFV DTGVHKSFLLEEWEKAKKEALTPECREKCSMCGMRERFPKCLKIYK >gi|224531369|gb|GG658183.1| GENE 3 2275 - 2946 863 223 aa, chain + ## HITS:1 COG:FN1226 KEGG:ns NR:ns ## COG: FN1226 COG0692 # Protein_GI_number: 19704561 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Fusobacterium nucleatum # 1 222 1 222 226 281 63.0 5e-76 MVHIGNDWDKVLEGEFQQEYYQNLRKILVREYRSKRIFPPAEKIFNALKWTSYKDCKVVL LGQDPYHGLGQAHGLSFSVPKGQRIPPSLQNMYKELQNSLGLSIPHHGCLEKWAKQGVLL LNTSLTVVEGQASSHSKIGWEIFTDHVIQKLNEREEALIFILWGNHARSKKKWIDSRKHY ILEGVHPSPLSANRGFFGCGHFRQVNEILRTLGKEEIDWQIEE >gi|224531369|gb|GG658183.1| GENE 4 2958 - 4397 1836 479 aa, chain + ## HITS:1 COG:FN1225 KEGG:ns NR:ns ## COG: FN1225 COG0769 # Protein_GI_number: 19704560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Fusobacterium nucleatum # 4 476 3 479 485 510 54.0 1e-144 MEKLLEGLQYEILQKPEVEIFTGMEHDSRKIVEGSIFVALEGEVVDGHTFIDTAIEKGAK LIIVSKEVPCQKGIGYVLIKNLRKHLGILASNFYGWPQKNIKILGVTGTNGKTTTTYLLE QLLGEEKVARFGTIEYKIGKEVIEAPNTTPESLDLVRMIKKAYEEGLEYIIMEVSSHALE LGRVNMLEFDGAIFTNLTLDHLDYHKTMEQYFMAKRKLFLKLRGKAIKILNVDDEYGKRL QEEFHGISYGTKQAGVQGKILGFEGGKERVELSLFGKKKECKIQILGGFNLYNLLGSIAL VKELGMSEEEIFAKVELLQGAPGRFETVDCGQDYMVVIDYAHTGDALENILQAIQEIKTK KIITIFGCGGDRDPRKRPIMAEIAERYSDFVVLTSDNPRTENPESILEEVKGGFTKENHI CVLERAEAIAEGIRRAEKGDIVLIAGKGHETYQILGRKKYHFDDREFARREIVFRKQGR >gi|224531369|gb|GG658183.1| GENE 5 4399 - 5238 1140 279 aa, chain + ## HITS:1 COG:FN1224 KEGG:ns NR:ns ## COG: FN1224 COG2877 # Protein_GI_number: 19704559 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Fusobacterium nucleatum # 1 277 9 284 286 474 81.0 1e-134 MIVQDTKVVKVGENVSIGGKKRFTLIAGPCVMESQELMLEVAGEINKICKKLGIEYIFKA SFDKANRSSIHSYRGPGLEEGLKMLQKVKDTYGIPVVTDIHEPWQCEKVAEVADLLQIPA FLCRQTDLLIAAAATGKPVNIKKGQFLAPWDMKNVVVKMEESGNEGILLCERGSTFGYNN MVVDMRSLLEMRKFGYPVVFDVTHAVQKPGGLGNATSGDREYVYPLMRAGLAIGVDAIFA EVHPNPEVAKSDGPNMLYLKDLEEILKVAIQIDDLVKNY >gi|224531369|gb|GG658183.1| GENE 6 5372 - 5518 279 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315918173|ref|ZP_07914413.1| ## NR: gi|315918173|ref|ZP_07914413.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 48 34 81 81 82 100.0 9e-15 MIAMPKPLSMKEERIEIEGKTREVSFEGEQVFIDGSVEIVAEGNSYLK >gi|224531369|gb|GG658183.1| GENE 7 5546 - 6370 1327 274 aa, chain - ## HITS:1 COG:FN0130 KEGG:ns NR:ns ## COG: FN0130 COG1136 # Protein_GI_number: 19703475 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Fusobacterium nucleatum # 7 273 1 267 268 417 82.0 1e-117 MEELNLMDILGIQEEIIEEVTIVAGYNKLGEKENFDSFTIKAGEIVAIVGPTGSGKSRLL ADIEWGAQGDTPTKRSILVNGKPMDAKKRFSPSHKLVAQLSQNMNFVMDLSVRDFLDLHA ESRLAANREEIIEKIFRQANDLAGEKFNLDTPITSLSGGQSRALMIADTAILSSSPIVLI DEIENAGIDRKKALDLLVGNNKIVLMATHDPILALMGDRRIVIKNGGIAKVMESNPEEKQ ILGKLEELDDVVQSMRNQLRYGEVLSCDFEIKKI >gi|224531369|gb|GG658183.1| GENE 8 6371 - 7063 819 230 aa, chain - ## HITS:1 COG:FN0129 KEGG:ns NR:ns ## COG: FN0129 COG0378 # Protein_GI_number: 19703474 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Fusobacterium nucleatum # 1 230 1 230 231 392 79.0 1e-109 MKFITISGPPSSGKTSLILKTIENLKQKGMKVGVVKFDCLYTEDDVLYEKMGIPVKKGLS GSVCPDHFFVSNIEEVVQWGKRQGLDLLITESAGLCNRCSPYIKDIKAICVIDNLSGINT PKKIGPMIKTADIIVITKGDIVSQAEREVFAARVQIVNPRAAILHVNGLTGQGSFEFANL VMEENQEIDTVVEKQLRFSVPSAVCSYCLGETRIGTSYQMGNIRKIDLED >gi|224531369|gb|GG658183.1| GENE 9 7060 - 8259 1501 399 aa, chain - ## HITS:1 COG:FN0128 KEGG:ns NR:ns ## COG: FN0128 COG1840 # Protein_GI_number: 19703473 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Fusobacterium nucleatum # 89 396 5 312 314 452 68.0 1e-127 MYINLSMNIREIITKYPETKAVFENQGIQGLEDEKVLQLLEAYPLSKIMELKKVDSKAFL SRLEESIKTNRETSDITMKKEEKKENGLSLLGLLPCPVRIPLLEGFQNFLQNHPDVEVNY ELKAASSGLDWLKKDVIEANHVDQLADMFLSAGFDLFFDNKWMGKWKAEGIFEDMTGLTH YNTDFENENISLKDPKGDYSMIGVVPAIFLVNKNALGNRKAPESWQDILSEEFENSISLP IADFDLFNSILVHIYKLYGQEGVEKLGKSLLSNLHPAQMVDAKEPAITIMPFFFSKMIKE NGPMQVVWPKEGAIISPIFMLTKKHRKEELKPIVNFMGGKEVGTIISHQGLFPSIHPEVE NPTSGKPFVWIGWDFIYSHDMGQLLQDCESWFMKGAKRS >gi|224531369|gb|GG658183.1| GENE 10 8397 - 8621 266 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467040|ref|ZP_05631351.1| ## NR: gi|257467040|ref|ZP_05631351.1| hypothetical protein FgonA2_06334 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 74 1 74 74 138 100.0 1e-31 MRILVKNKKWETSFQTVTLICDVKAKNGIFHIQFPYNGKYVKIKSNNLDLTFHHLEKVFN RFGNLPETKQFLAS >gi|224531369|gb|GG658183.1| GENE 11 8796 - 9443 997 215 aa, chain + ## HITS:1 COG:ML1003 KEGG:ns NR:ns ## COG: ML1003 COG1974 # Protein_GI_number: 15827479 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Mycobacterium leprae # 91 214 113 235 235 70 37.0 2e-12 MDFKTYLKEKREELGYSQNKLAKALQITQPYYNSIERGEVKNPPSEEILERMIGLFSLNE KDAEYFLYLAAVERTPKIILEKMKQIKGEGPSAIPLFPRISAGIGVFGEEEVEDYISIPG VRNVEEVFSVRVKGDSMEPTIKNSSIIVCRQNMQVHNGEIGAFLVNGEAFVKRLQIKPDY VVLMSDNPNYQPIYISPNDEFVSLGKVLKVINDII >gi|224531369|gb|GG658183.1| GENE 12 9453 - 10313 892 286 aa, chain + ## HITS:1 COG:lin0782 KEGG:ns NR:ns ## COG: lin0782 COG0384 # Protein_GI_number: 16799856 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Listeria innocua # 1 278 1 271 282 177 36.0 2e-44 MKRPIFIYDAFTKEKFGGNGAGILFHAEELSTAEKQNLAKELGFSETVFIQSSEKADFKF EYFTPKQEVDLCGHATIAAIYSLFEENRISEDKDRITIDTKLGVLPIFLERQGKELLSVW IEQDEGDLSFTLDISEEEILASLGLTEKDRNRKFLLVKACSGLWDLMIPLASKEALDKIQ IDFSKVEALSEKLSVISFHPFFLEDKHVYVRNFAPIVDIPEESATGTSNGALAFYLFKQG YLSENEILYCHQGESLQRKSQILAKITREEKILVGGEAIRILQGEY >gi|224531369|gb|GG658183.1| GENE 13 10313 - 11023 713 236 aa, chain + ## HITS:1 COG:FN0805 KEGG:ns NR:ns ## COG: FN0805 COG4912 # Protein_GI_number: 19704140 # Func_class: L Replication, recombination and repair # Function: Predicted DNA alkylation repair enzyme # Organism: Fusobacterium nucleatum # 2 232 15 251 251 114 33.0 2e-25 MKKESKGIQNFLKGFQEEEYQKFNAKLIPNLPSKEVLGVRTPILRKLAEELYLRQAERML QYMTELPHRYLEENHLHAFLIENIKDFSQTMEETEKFLPYINNWATCDTFSPKIFKKYPL EVYEKIKVWLQSTHEYTVRYGIGLLLSNYLEKHFQKEMLELVANIQREEYYIRMMIAWYF ATALAKQWSCTLPYLEQHTLEEWTHNKAIQKAIESRRITEEQKEYLRTLKRKTSKK >gi|224531369|gb|GG658183.1| GENE 14 11187 - 11249 99 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRCLKTEFKRNEKNNICKFK >gi|224531369|gb|GG658183.1| GENE 15 11300 - 11737 423 145 aa, chain + ## HITS:1 COG:Cgl0313 KEGG:ns NR:ns ## COG: Cgl0313 COG3600 # Protein_GI_number: 19551563 # Func_class: S Function unknown # Function: Uncharacterized phage-associated protein # Organism: Corynebacterium glutamicum # 16 135 21 146 148 62 32.0 2e-10 MLKNLDMICSLILKTNPNISNLVLQKLLYFIQASLLVTTGNPAFEEDIEAWMYGPVVPEV YDNFKKDKDYYNQFETNQLDSNIQEIVVNITKNLGKINPYSLVNATHGYDTWKEAWDRGG WNTIISQDKIKNYHLDRLKNKGSYF >gi|224531369|gb|GG658183.1| GENE 16 11737 - 12579 798 280 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467045|ref|ZP_05631356.1| ## NR: gi|257467045|ref|ZP_05631356.1| hypothetical protein FgonA2_06359 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 280 1 280 280 460 100.0 1e-128 MPTHEELSKYTHGELSRFTHEQLSNKEDLGKSIQNLVDEFPEEVSKKSEDSIRNLVQESA KKFKKYSEDFEKYRLYFKQNKHSRLDEKWEEKKKEFGECSKQFNEDFDLFVKSLSEGFKD RKNYELELLVYLQLAQTKNTRVHNRLHKAIMKDAEDKIKSTEEKIRSTEKNLEKQQKNLK NLYTGFMTIIGVFLTIFTLVSANLNFFGNIIKNEDLSISKISGIFLLVNSVAIISISALI LLLFASIRYFNETKEFKEKRWLFIFIVPFVLMGLALLLIA >gi|224531369|gb|GG658183.1| GENE 17 12608 - 14032 1033 474 aa, chain - ## HITS:1 COG:no KEGG:Ilyop_1066 NR:ns ## KEGG: Ilyop_1066 # Name: not_defined # Def: resolvase domain protein # Organism: I.polytropus # Pathway: not_defined # 2 468 3 464 469 434 49.0 1e-120 MKIAVAYVRVSTNKQDIRGSKLGQEQEIKNYASKEGYNIVAFFDDTEHGDIANRVGLDDL KKYLRMNDSVKYVIVYHSDRFTRGFQNGIQDLFFLDGLGIKLVSVMEGIQNIEGNYDSLP TIVRMLGAQVEKDKMVQKVTTAMYQYAETARYLGGSIFPWFSVEKGYIDGKRCKIVVQNK DTWDFYRRFFLTMIQSKSIKSTAEKFGLNLNTVQSWLVVPELMGKRSYGKKGKIDKLHNK GRRQDYLITEKIVFPALLTKEEYDKLLYLRHRHRIQVREDIKIYLYSQVLYCGCGGKFEG NFIRKIGKEGKGTLYYRCSKCGKRINAKKLERDLIDRICNDSRLQMLNEVEFRLADLFDE KTEYEKQINILREKEKRVIHLVTDGITSMDVVEAELRALKKQRDHFHSLINKIDKTIQEE AKKEITEDNINMLKELLTLNLPDDDFRISLKEIINLIIRRITIGNTDNKIYITF >gi|224531369|gb|GG658183.1| GENE 18 14164 - 14349 253 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467047|ref|ZP_05631358.1| ## NR: gi|257467047|ref|ZP_05631358.1| hypothetical protein FgonA2_06369 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 61 1 61 61 87 100.0 3e-16 MKTRYKLYDTKNKILLGIYDSLSEVRSTIKNITGRKIRLEYNYNNQGTYSKQYLTFVERY I >gi|224531369|gb|GG658183.1| GENE 19 14367 - 14705 293 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467048|ref|ZP_05631359.1| ## NR: gi|257467048|ref|ZP_05631359.1| hypothetical protein FgonA2_06374 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 112 1 112 112 196 100.0 6e-49 MKKDRLKEIWDRQKHFDDIVLKRIGKTKGEVSNDIKVALTTELGELYNENPTFKFWKEQK NIEITDKTREEFADCLHFLISIGQDIFKNEEEMFQWYCNKNDKNLMRQNNGY >gi|224531369|gb|GG658183.1| GENE 20 14716 - 15165 424 149 aa, chain - ## HITS:1 COG:no KEGG:MCCL_1951 NR:ns ## KEGG: MCCL_1951 # Name: not_defined # Def: chromosome partitioning protein ParA homolog # Organism: M.caseolyticus # Pathway: not_defined # 1 119 1 132 253 61 33.0 9e-09 MSQIILVKNNKGGVGKSWITLQLAAYKAMLGMRTCILTSDPQNNILTFSGRRIKEINYLP DLLQDNKKSLFELRENLFFIPAKTAQLRADEVELFYKFIKVLKKKFEFIVIDGNPILSID DEILNYEDCTYKPMCNNLKKLGYTVVERR >gi|224531369|gb|GG658183.1| GENE 21 15168 - 15380 262 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467050|ref|ZP_05631361.1| ## NR: gi|257467050|ref|ZP_05631361.1| hypothetical protein FgonA2_06384 [Fusobacterium gonidiaformans ATCC 25563] # 1 70 1 70 70 127 100.0 3e-28 MSKPTNFIEYGMPLTEWMTIRTRLLELNIEPEPFQVCKDWGKLSFDINKVKFGYWKKKEL LPENYMKSRW >gi|224531369|gb|GG658183.1| GENE 22 15373 - 16551 1306 392 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467051|ref|ZP_05631362.1| ## NR: gi|257467051|ref|ZP_05631362.1| hypothetical protein FgonA2_06389 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 392 1 392 392 630 100.0 1e-179 MEYITLQDIDRQGYYQLDKKLFNNPHYQKEIKRMKKVPSQRYVDGKLQKYSKEVEIITKI ETLSDTSKILYSFLLDQLKLSLENGWWDEKRRVYIRFSVQKLALLMNKSKDTIVKCKKEL EENELVQIVSKDQFESDIFYLGKVKERPIQILEEELSTSYTTLSTSRQYRPVEDVDQYAV ESVDLVEDVDQTKSLNFQEKNSSLVDVVDSTNSSSYINKTTTANINNNKYIIELLEKHKI SKGTIKNILNLNRNISEEEIAAALSKMQEKKWGEGALYKALKEQWIQAEEKMEAEQSTEK INAFIQGIYNQQLAYLELYGYKNSSKLQAIEDFEEKIKKVNPDYLNTECYKKFLQRLENI AVTNDKEPISSPFQAEQKRFLKNSHRIGGSHV >gi|224531369|gb|GG658183.1| GENE 23 16644 - 17261 445 205 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467052|ref|ZP_05631363.1| ## NR: gi|257467052|ref|ZP_05631363.1| hypothetical protein FgonA2_06394 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 205 1 205 205 348 100.0 1e-94 MDVFTLKLLIIFFPGIVGVIVINYAIKSDKKLEVAEGIAYSFVLGLLSYLYAYIFKINDI FSQINSEKFEISGIDILATLGLSIGFSILIIIVIKKEYFHYVLRKLKISTSTGNKYILKN IISTKDSNLNYLQSHWVCIRYQNKKLNYVGCIQTVDILNDSYIEMLLKNVTVTTEEGNYD LEALYLCEKPENFVIEYIKIEDTEK >gi|224531369|gb|GG658183.1| GENE 24 17287 - 17391 93 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPNKKEPIWRPSNDSEVATKTPSNPKPSAPTPKK >gi|224531369|gb|GG658183.1| GENE 25 17431 - 17667 139 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315918189|ref|ZP_07914429.1| ## NR: gi|315918189|ref|ZP_07914429.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 78 4 81 81 140 100.0 4e-32 MNKYPVTIFVLISPEKDCLSAYTSNFEAEQDLKTRNAQFGYGYSIEPISLTTTRSFYERL KHFFETKVEKQDVIEVKE >gi|224531369|gb|GG658183.1| GENE 26 17660 - 17755 172 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLETLKALIKQYGNITFLELQERLTGGLYE >gi|224531369|gb|GG658183.1| GENE 27 17912 - 18145 251 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467056|ref|ZP_05631367.1| ## NR: gi|257467056|ref|ZP_05631367.1| hypothetical protein FgonA2_06414 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 77 1 77 77 105 100.0 1e-21 MNEAIKEEIMNFLKELELNKKLSTPSLEKERVVFCLLAKLEQKLEKHLFIELEDSIIEAF TSIKEDYFTFGSLSEAK >gi|224531369|gb|GG658183.1| GENE 28 18341 - 18499 176 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKKIALQLRLDEELHQKVKEIAEKELRSINAQLEYFILKGIENFEQSQKNS >gi|224531369|gb|GG658183.1| GENE 29 18450 - 18644 247 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467058|ref|ZP_05631369.1| ## NR: gi|257467058|ref|ZP_05631369.1| hypothetical protein FgonA2_06424 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 64 1 64 64 93 100.0 5e-18 MKKEIIYTSSIRLSKDNYEYIQKKALEVGISQNALMNVLLNLGSQVMNVKNFSDFVQNSQ YLSK >gi|224531369|gb|GG658183.1| GENE 30 18656 - 18883 56 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467059|ref|ZP_05631370.1| ## NR: gi|257467059|ref|ZP_05631370.1| hypothetical protein FgonA2_06429 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 75 1 75 75 110 100.0 5e-23 MEVREKMVRFLQELELSNNLQCKSLRKEAEVREFLEELRKKLPKEDFCILEDLIWEAFTS IKEDYFTFGSLSEAK >gi|224531369|gb|GG658183.1| GENE 31 19118 - 19342 230 74 aa, chain + ## HITS:1 COG:no KEGG:Sterm_0816 NR:ns ## KEGG: Sterm_0816 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: S.termitidis # Pathway: not_defined # 1 68 1 68 69 99 67.0 5e-20 MIKFRIHVLMAEHRLTQKELSQKTGIHASIIAKYYHDSIIRINREHLDIFCKIFDCDIQD LIEYIPDEEPSSAE >gi|224531369|gb|GG658183.1| GENE 32 19488 - 20198 665 236 aa, chain + ## HITS:1 COG:no KEGG:Mmar10_0570 NR:ns ## KEGG: Mmar10_0570 # Name: not_defined # Def: hypothetical protein # Organism: M.maris # Pathway: not_defined # 4 138 6 140 329 119 40.0 9e-26 MEKKKTCFIVCPISDEKSDIRKRSDQLFNHILEPVCNELGFEVIRIDKLPHNNSITAEII KYLKEADLVIGDTTDNNPNCFYEIGYRAAISKPLILIRNAGQKLPFDISGINSLEYNLND LDEAEKFKGILKDNIKVLDFAKFHEEEQDLQNSNENLNSILQLLLNLNSKIDQMIKDNNT YSLNQASLHRLLAEIVLKKNEQVPKTQDEVMLEFIKEIMKNPEGMKALVDFGKSIE >gi|224531369|gb|GG658183.1| GENE 33 20188 - 20370 318 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315918196|ref|ZP_07914436.1| ## NR: gi|315918196|ref|ZP_07914436.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 60 15 74 74 99 100.0 1e-19 MKTNAKIALLSLLLAYIELAEDSDFVVKNFESLQQKQQAKKAEMAFYKGFYDGIQGKSIQ >gi|224531369|gb|GG658183.1| GENE 34 20620 - 20685 70 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPFFVQINILRPFKQLILMMY >gi|224531369|gb|GG658183.1| GENE 35 21090 - 21290 287 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467065|ref|ZP_05631376.1| ## NR: gi|257467065|ref|ZP_05631376.1| hypothetical protein FgonA2_06459 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 66 1 66 66 112 100.0 8e-24 MPMENKKHSFKLICKNGRSISVLMDNKKLHNVLEVDIQTQKIGDRMKNSVSITFFDVGNI EIQDLS >gi|224531369|gb|GG658183.1| GENE 36 21357 - 21560 236 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467066|ref|ZP_05631377.1| ## NR: gi|257467066|ref|ZP_05631377.1| hypothetical protein FgonA2_06464 [Fusobacterium gonidiaformans ATCC 25563] conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] # 1 67 1 67 67 120 100.0 4e-26 MKKLVSILFLFLTVLSFAETVYITPTGKKYHATKTCKGLVRAKKIIPIERSEAEARGYKP CKHSYGG >gi|224531369|gb|GG658183.1| GENE 37 21631 - 22242 496 203 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467067|ref|ZP_05631378.1| ## NR: gi|257467067|ref|ZP_05631378.1| hypothetical protein FgonA2_06469 [Fusobacterium gonidiaformans ATCC 25563] # 1 203 1 203 203 375 100.0 1e-102 MNLDVGVVKIIILFIPGILGIYWFTYLFIPKVNWNFAEKTFYSVVLGIISYVADFKDFLL IISTSEQVLTKKITLSFMIKPIGISLGLTTFLCIVNNKCKPLDRILTWLGVNRVLEEKNL LNTIYLDQNLRQYISEYVVIRCKDGNRYYGRMETYTYKEDTLQIFLIHASWYKPKEKEIY MEFLSICLHYRITDISIESIEEV >gi|224531369|gb|GG658183.1| GENE 38 22246 - 22416 266 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSNKKSRILNNNNTNKNNKLSFMIGIESGLVLTEINNKKSEKKKPKPQKPKIEVKP >gi|224531369|gb|GG658183.1| GENE 39 22630 - 23388 925 252 aa, chain + ## HITS:1 COG:FN1589 KEGG:ns NR:ns ## COG: FN1589 COG2932 # Protein_GI_number: 19704910 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Fusobacterium nucleatum # 5 204 4 198 219 66 29.0 5e-11 MRKTGDIIRAFRAREGLTGQELGDKIGVSQAFIHLMESDKRRVPQKTMETLKLMLSREDY LDILKYEEYATTPDFIKNELKRISNFSKEDIISEFEMREYPIYDSVSAGFGIIPDAAPIE YISLPILRGEIVGIYVVGNSMEPSISDGDIILVKKDIEVQVGEIGVFVNQVTGEGFVKRL KYKNGCYILKSDNPMYTDVEIQSDDIICCGKVARIIKRAGNKPEPKLDLSDLTEENKKRV EDFINILKLSQK >gi|224531369|gb|GG658183.1| GENE 40 23404 - 24381 583 325 aa, chain + ## HITS:1 COG:no KEGG:LCRIS_01524 NR:ns ## KEGG: LCRIS_01524 # Name: not_defined # Def: hypothetical protein # Organism: L.crispatus # Pathway: not_defined # 5 301 2 308 309 176 37.0 1e-42 MSTDKSKQSSSQLIEHMKEKGIKFNIVNEVEAQQFLENNNYYFKLAAYRNNYEKNSKGKY LNLDFAYLKELSIIDMELRYLILQMALDIEHFIKVKILNDIEKNDLEDGYNIVTEFCSQN ERVNSTIDNHAKSEYCRKLIQKHKDNFPLWAFVEVISFGDTIKLYEFYCKKYGTLQNWKL LYPVRDIRNAAAHSNCLIYNLEKDRIKTSPKIINYVKSISTIGEDMRKNKLSNKLFSDFA TLIYVYDSFVTSDSLKQKRAKELQYFFEQRMKKNQDFFIKNDKICSAYIFGKCIVDNFVE KILQEKDNFFISLIKKIVDILKKAC >gi|224531369|gb|GG658183.1| GENE 41 24575 - 24793 244 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467071|ref|ZP_05631382.1| ## NR: gi|257467071|ref|ZP_05631382.1| hypothetical protein FgonA2_06489 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 72 1 72 72 132 100.0 6e-30 MKIGIQEYLENLFSSVDEIVDKKGVPIESFAKIGGLNVGTLKNKRFLWKQGQLPRKSTLL KIERAINFFTQN >gi|224531369|gb|GG658183.1| GENE 42 24824 - 25036 193 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467072|ref|ZP_05631383.1| ## NR: gi|257467072|ref|ZP_05631383.1| hypothetical protein FgonA2_06494 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 70 1 70 70 126 100.0 6e-28 MNGQYCWSIKVIDGEMLCNGEVYKKIVLKEFFYSKEEAKKAFARIKLSHPKKKIIFSHLI KGKWCIYDEV >gi|224531369|gb|GG658183.1| GENE 43 25026 - 25244 118 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467073|ref|ZP_05631384.1| ## NR: gi|257467073|ref|ZP_05631384.1| hypothetical protein FgonA2_06499 [Fusobacterium gonidiaformans ATCC 25563] # 1 72 2 73 73 130 100.0 2e-29 MKYKDDLFPGRTYCSCSNFLYSIYNRVLKPTPNTRIYIDYNQEKIIIECKICGKKEDIPF SRIKPKRNSCMD >gi|224531369|gb|GG658183.1| GENE 44 25232 - 26314 314 360 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467074|ref|ZP_05631385.1| ## NR: gi|257467074|ref|ZP_05631385.1| hypothetical protein FgonA2_06504 [Fusobacterium gonidiaformans ATCC 25563] conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] # 1 360 1 360 360 634 100.0 1e-180 MYGLDRASISIAVAMHMFDLSGNILKHYPKATSNTISSKTMSFDINSKNINKIKIVEKRE YRIFQIDFSYPRKYSDNNIIVENDEESRRKTEKEILEVIQKITGEKLKLERMVYDYFEFT TQQEVGSFFHYYNIINFFYRALVRNFKDLDKTQYYNYTEKEDRFYTTGFIFKPFKGWKIR LYGKNFEHNKYHEDKIFGGLMRMEHVLTRRLIKKLFNSCYVTDIQIEEMKKQISSILCKQ IFKILVEEIYRSNEKLEKALQNFKSNDLESIIRDYAEWILDNSIVDDIVTKINTKSYRQL QRYRKKIRIILKLAQSRASPKREYFGNIERLEKFINEILLQSCKVECNNIKHFTCKILSK >gi|224531369|gb|GG658183.1| GENE 45 26453 - 26704 277 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315918208|ref|ZP_07914448.1| ## NR: gi|315918208|ref|ZP_07914448.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 83 1 83 83 136 100.0 4e-31 MQRLRTKRNKEVRNIEIIKLNLQDIKRDSTNPRIVTEAQKELYKKLVAKFGMILPVIITE DFVSCFDDAKLEAAAELGIEEVR >gi|224531369|gb|GG658183.1| GENE 46 26751 - 27206 140 151 aa, chain + ## HITS:1 COG:BH3535_2 KEGG:ns NR:ns ## COG: BH3535_2 COG0863 # Protein_GI_number: 15616097 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Bacillus halodurans # 2 147 86 248 292 120 41.0 1e-27 MEEGGAFYVFYAESEVIAFRDALEKSGLKYSQTLVWVKNSFNLSRQDYNWKHEPCLYGWK LGKAHYFIKDFTQDTELQTEEILKKMSKKELIQHILELEEKVYTTVIRENKPLKNDVHPT MKPIKLLARLIANSSKKGWKVIDLFGGQEVP >gi|224531369|gb|GG658183.1| GENE 47 27164 - 27367 295 67 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_1048 NR:ns ## KEGG: Ilyop_1048 # Name: not_defined # Def: DNA methylase N-4/N-6 domain protein # Organism: I.polytropus # Pathway: not_defined # 10 67 356 413 418 67 51.0 2e-10 MESYRFIWWSGSTLIACEQLNRQAFLMEYDPVYADVIVKRYASMGKEDIKLIRNGVEYSW EAIKEEF >gi|224531369|gb|GG658183.1| GENE 48 27382 - 28050 803 222 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467078|ref|ZP_05631389.1| ## NR: gi|257467078|ref|ZP_05631389.1| hypothetical protein FgonA2_06524 [Fusobacterium gonidiaformans ATCC 25563] # 1 222 1 222 222 361 100.0 2e-98 MKENFTEAQAKVLELYIKLEVAKFGNTKKEKYEEIQRRTKQSINTITSWIYRYLEDFKKY IQEIEKKEKNAIISNFKGLTEKQTKYVLARMNGIGKKEAAILAGYSPKTKPANIEKAPMV ANTMEKIRQKYFNDECFGAEAQLNHLKFVIDMGKAGVKTIEYIDEKGPEGTLQRKTIKHE YPLQAINAAVREVNSMLGYNYMDEMRAEQLKKKKQEQLVLIE >gi|224531369|gb|GG658183.1| GENE 49 28177 - 28620 567 147 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_1045 NR:ns ## KEGG: Ilyop_1045 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 1 137 1 142 159 74 34.0 1e-12 MQQILATESRLAKLFQFSERKVRDYFKAARVSPGKYDLLHSIEIFVESNSGKDEAAELKR AEKELKEYKLKILKKEYHAEADVVRIVADMNYNFKAKLMAIPGKLSVVLTGQTNQLEIEN ILKKEITEVLEELKDYEYQGEMVDECE >gi|224531369|gb|GG658183.1| GENE 50 28607 - 30379 1905 590 aa, chain + ## HITS:1 COG:RSc0853 KEGG:ns NR:ns ## COG: RSc0853 COG5525 # Protein_GI_number: 17545572 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Ralstonia solanacearum # 16 589 17 608 660 280 32.0 7e-75 MNVSKHTAELIAKIVQESLSPPENLTVAEWADKYRVLSRESSAEAGKWDTNRTPYMHTIL ECITDIETKKITMMCSAQIGKTEMLLNVLGRYMHLDPCPILFVQPTVDDAKSFSKERVAP MIRDTKILRELVKKTNRFEEGTVQEKSYPGGYVRFVGANSASGLASRPIRITLLDEVDRF PLSAGKEGDPVKLAERRTNNYFNSKNLRVSTPTDDATSKIQLLYLASSQEEWSLPCPYCG EYQALDFEQMRYKNLEEPELECKFCHNSAQEKEWKKERQLNGKWIAKFPTEKENRGFHLN ALASPWLTWKEIVREYLEVKDDDFQYRTFMNTVLGKTFSVNLEAAMDYEGLYESREEYGA ELHDDIVILTAGVDVQDNRLEIEVVGWGYEYESYGIVYRDFPGDPGKEDVWLQLDEFLRK KFFFKNKKYLTIAACLIDSGGHHTGSVYKYVYKKEKRGIYAIKGQGSWGTNILNGFRKTT KKGVPSINLLSLGVNALKDLTYSRLSILQGSGKCHFPKSSTQGYGLDYFKGLTAEVKVKK STPKGMKIAWEILDGRRNEPLDLRNYATAGIELIPIDLHDKKYKRKGEKA >gi|224531369|gb|GG658183.1| GENE 51 30376 - 30594 287 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467081|ref|ZP_05631392.1| ## NR: gi|257467081|ref|ZP_05631392.1| hypothetical protein FgonA2_06539 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 72 1 72 72 135 100.0 9e-31 MIFTEEQCKEHLNAWLAADLAVSKGQSYTIGNRVLTRVNSSEINKNIKLWADRLAQAQRK SKGPRTYQIIPR >gi|224531369|gb|GG658183.1| GENE 52 30604 - 32145 1477 513 aa, chain + ## HITS:1 COG:RSc0857 KEGG:ns NR:ns ## COG: RSc0857 COG5511 # Protein_GI_number: 17545576 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Ralstonia solanacearum # 46 489 38 469 508 140 26.0 6e-33 MNVIDWTVGFLNPKAGLARIKNRKAYNLAKIENGYSNKDDPVLQNWLVSSEGPDTDILIG LDDLRAKSRNLYMNNDLAGAALKKMRTKTVGSGLLPKPTINYTYLGIDREEAKKLERIIK NKFNAWALSTNSDAARMFTFYELQSLLQLSWVMNGDAFAIPLRKTRKGINIELCIQLLEA DRVINPPGANNYTKSGIEFDEHGELKKYYIASSHPGDNFNYEVKGYPAFNSLGRKNILHI FEPERIGQRRGVPILAPIIFSLKQLGRYKSSELTAAVINAMIGLIVESEDAEQEGFAGGF GVQMEDENTAESKQEQPKIQLDHGTLVVGKPGEKIKEFSTSRPNKNFKEFVEAIYEEIGA NLEISKEVLMSSFKNSYSAAKASLEEAHQRFQVSRKILERTFCQPIYEEFILELIKNGDI DCPRFFEDESIRYAFTRCIWVGAGKSSLDPLKDANANMKELQNFTTSRSIIAATSGYDYE EIFRERAEEEKELAILEKDLIKIRKGVKENGEK >gi|224531369|gb|GG658183.1| GENE 53 32132 - 33247 1468 371 aa, chain + ## HITS:1 COG:ECs2960_1 KEGG:ns NR:ns ## COG: ECs2960_1 COG0740 # Protein_GI_number: 15832214 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Escherichia coli O157:H7 # 3 187 66 240 244 126 37.0 6e-29 MAKNKKFFEINNLTEGIAEIRIYGTITKWAWEEVGEVSSHSFAKELKNLKNISKINLRVN SGGGDVFEANAIFNLLKSYAKENNVEIIGYIDGLAASAASFLVLCAHKVIMGVGCLFMIH NPWTYTKGNVKELGQTIDFLNKIKESILDIYETKTKLTRQEISQKMDEEKWFSASEALES GFVDEMSEMEDVENNILNAAGENFVQNFINSEILKNKVEEIKNKIKLENNQGGKEMPKNL QELLAQCPDLMNEYKAQVVAEIANQEKEKVEAAIKEERNRIKALEDIPVLNDKQKEIITK AKYEEARDPKDIMAEFYMSNANKAAAEIQTATAEANEAGLNTITPSVTNEVEEGVVDQLC AAAKNIFDGEK >gi|224531369|gb|GG658183.1| GENE 54 33265 - 33585 588 106 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467084|ref|ZP_05631395.1| ## NR: gi|257467084|ref|ZP_05631395.1| hypothetical protein FgonA2_06554 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 106 1 106 106 191 100.0 1e-47 MAKSNRFEQQADVRVFQGSFPVETLNMTLKTQVEAGDVVALDTSGNLGKYDGATYTDVYG VSYETIEAPGEAVIILTGGLVKGFLKFGSNEKKLVVALRKVGIFVK >gi|224531369|gb|GG658183.1| GENE 55 33598 - 34605 1186 335 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_1947 NR:ns ## KEGG: Ilyop_1947 # Name: not_defined # Def: hypothetical protein # Organism: I.polytropus # Pathway: not_defined # 8 332 9 336 338 183 35.0 1e-44 MPGFYTPKTIRKVRQNLDNKRDFLTELFFSKSNTVTTEDVILEYTKAGEAVAPFLTPLEA GRPVYNKSKKSNIIKAPSIGPEYTLTPKDAFDRAPGQSDDDYNPVKRIGERMAEILLDQE NYIKNRIELMVSQFLTTGVVKSEDGKVGYEVDYELGNKSTLDSSHKWTASGIEPLESLDE MISSAEVNGLKTENVVLGSKAANLLTKSKGYKDAISRDLQSEFVKKAVRLYPGIVWLGTY MKFGVELFSYNRKVIGEDGKPIQLLPANIVIGGPSQGEILYAPIIYMADGMVHVKKRYSN VDTTNPKIAKITTESRPVLQPCDVDTYFSVTVCEA >gi|224531369|gb|GG658183.1| GENE 56 34632 - 34865 332 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467086|ref|ZP_05631397.1| ## NR: gi|257467086|ref|ZP_05631397.1| hypothetical protein FgonA2_06564 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 77 1 77 77 98 100.0 1e-19 MERRAMKIKFLRNYGEYKIGDIAEFDGEELEYIVNTLTAVSVEDGFESDEIEEEQGTMEE DPELKKETSKRAKKGEK >gi|224531369|gb|GG658183.1| GENE 57 34862 - 35176 350 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467087|ref|ZP_05631398.1| ## NR: gi|257467087|ref|ZP_05631398.1| hypothetical protein FgonA2_06569 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 104 1 104 104 164 100.0 2e-39 MNFKEQIRQELEIFLNLEEFGEIFTLDSVEYVGVIEQPNSEVPKEEYEGVIREVDFIVYT KYQEPLEKYTSGKQVWLNKRLLVVHRAYEEEGLFVMELAERNRF >gi|224531369|gb|GG658183.1| GENE 58 35176 - 35766 790 196 aa, chain + ## HITS:1 COG:no KEGG:Dred_1209 NR:ns ## KEGG: Dred_1209 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 5 193 4 183 185 79 34.0 1e-13 MEHFLEVKNLEVAEAMLRGIPNGIERAVAGTVNKALGKVKTEMKAKVTSEYNIKKMEVEK LLVLQKANFSTLRGTISARSYRTPLSKFIGTHSRKNGIKVRVKKTEGFKNSQGKERLFGK PFVANVETGHEGTQHMGIFQRKTQKGRYPIEQLYTVSISEMLGSETVSEYAVEKGQDYLE QIMAKEVDRILKGYVK >gi|224531369|gb|GG658183.1| GENE 59 35763 - 36230 565 155 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467089|ref|ZP_05631400.1| ## NR: gi|257467089|ref|ZP_05631400.1| hypothetical protein FgonA2_06579 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 155 1 155 155 288 100.0 9e-77 MIDVRILELSIKALIEPLIEGQLYDVYQGEKREIQIHTGMLPPDPEETIIPAITIRTIKG KNSLMDKILTVIVSIGIFDKSAENGYIKISELTQKIFDTLLKVGILENRFEILPEAEWSH PETQPYPYYLGFIKLNVVYEKDYREDDKDWLDGGE >gi|224531369|gb|GG658183.1| GENE 60 36271 - 36486 233 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467090|ref|ZP_05631401.1| ## NR: gi|257467090|ref|ZP_05631401.1| hypothetical protein FgonA2_06584 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 71 19 89 89 115 100.0 1e-24 MSKIYIGPTISKYHLLENSVYLNIYPNNVQEAIQEYPIAAKLFIEIEKIHERNSEQNKIY YDLLKEKLGGK >gi|224531369|gb|GG658183.1| GENE 61 36487 - 37887 1674 466 aa, chain + ## HITS:1 COG:STM4213 KEGG:ns NR:ns ## COG: STM4213 COG3497 # Protein_GI_number: 16767463 # Func_class: R General function prediction only # Function: Phage tail sheath protein FI # Organism: Salmonella typhimurium LT2 # 3 465 5 471 475 133 26.0 8e-31 MAFRHGVTGNESPTRLIAAVSDGITPVYVGTAPINLCEKQYINEPMLCSSYAEAVEYFGY SDDFKNYTLCEAIDTHFSKFNIGPIVLINVLDPSKHRKEVSNKSISQINGMYLLEDTGII ADTVVITSSFEHTKKFNEKGQLLLIPKEEKSGAIQVSYSTLDPSAIKAKEIIGGIDGETG KKTGLEAVADVFPKYRKVPSLLLAPKWSTDSTVAAVIEAKARKINGHFQAMGLVDLDTTK VKKYGDATKAKNDNNISSTFLDVSFPKIALGNQQYHISTQKAALLQLLAFNSEDVPFKSP SNQNMKGDSSVLADGTAIRLGLDEANYLNSQGISTVINWIGGWRFWGNRTSCYPAVSDPK DAFIVSRMMFNWLINSLVLTYWQKVDSPTNKVLIETITDSINIWLNGLVAAGKIIGARVE FRRADNPTTSLLDGKIKFKLYFTPALPAEEIIFDLEIDTKYYENLF >gi|224531369|gb|GG658183.1| GENE 62 37897 - 38430 569 177 aa, chain + ## HITS:1 COG:no KEGG:Spro_4913 NR:ns ## KEGG: Spro_4913 # Name: not_defined # Def: major tail tube protein # Organism: S.proteamaculans # Pathway: not_defined # 8 176 5 172 173 145 44.0 9e-34 MAKTIGIIPEKIINYRCFADGEMSPSALVDVDLPDIQYMSETISGAGIAGEIDSPTLGHF SALEIGLNLRTLIKKDFSLFSQKVYALEFRAATQSTDMVNGTINKGRLKVSARVVPKSMA LGKLEVGKPSGSNQKFACHYLKVEVDGETVLEIDKINMIFNVNGTDLLAEVRDAMGM >gi|224531369|gb|GG658183.1| GENE 63 38440 - 38775 441 111 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467093|ref|ZP_05631404.1| ## NR: gi|257467093|ref|ZP_05631404.1| hypothetical protein FgonA2_06599 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 111 1 111 111 199 100.0 6e-50 MKLQKKIKCIKNGKEFETDEIEIKKEDFTPKILLEAEREFLMTGGVFPQGDIESSRAFLA IVASKMLGCSYDTMIEEMTGLEFLEVTNAVKGLYDGLGWGAALLKALEKQS >gi|224531369|gb|GG658183.1| GENE 64 38814 - 38888 81 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNINFQELIEWTEDLVEILEKQAK >gi|224531369|gb|GG658183.1| GENE 65 38950 - 39213 281 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467094|ref|ZP_05631405.1| ## NR: gi|257467094|ref|ZP_05631405.1| hypothetical protein FgonA2_06604 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 87 1 87 87 140 100.0 3e-32 MYKINHIENHDVKETLKKYSTPPKENKSKLKNVFIIICFIAIMLFGWGYIVDFIEIAWSY ISMGFILIAFLTLSAVISILSFILKLF >gi|224531369|gb|GG658183.1| GENE 66 39281 - 41866 2324 861 aa, chain + ## HITS:1 COG:XF0730 KEGG:ns NR:ns ## COG: XF0730 COG5283 # Protein_GI_number: 15837332 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Xylella fastidiosa 9a5c # 73 700 17 653 739 108 20.0 3e-23 MKEIGISFGIGAVVGGAFSKSFGIASKGVSGLNREIINLQRSQQLLAKYDKDKKALFEKA RTIKQTKAAIEELRKSMKGEHGQTKENTKALSNLEKKLQNLNKSYSKELTGVRETAKLLK SKNIEIKNTSESYKVLEKQVQQATKATNRYNKAASLDKSAGRISKIGGKAITAGVAGLGL LYKPIQQAIKAEGAFADVKKQFDFDNKEEEDKFKKELHKIITEKKIAISLEELYGAAASA GQSGLNKKEAIQYIELASKIGMAFDMNREEAAKAMFEMRNALNLPYDGLVELTDKMNYLG NTTGASAANITDFVNRVGNIGKMSGFSADKVAAIGASLIEQGMDPDVAATGAKKVFSAMT KGSAVTKNQAEVYSALGINPVQLAKLAQNDAEKALDTLFMAISRKPKHEQGAIMFQLFGE EGKRGAVAIASNLERIHENLSKIKGTESKGSVDSEADIKRATTENQIEILKGKASIAFSQ LGNLLLPEVNEILNSFSNLLSKITEFQELHPEGFKQFMKWIGYGSIAMLGFGAVLKPVSW GIKTYSKYMEIAGFMTEHKFGTKLFSVGKKLITGVGKGVKAIKGFGATLLGNPLTWYVAG ILAIVAAGYLLYKNWDTVKQGAVDLKNKVVELVDKYWFMLGPLGALVKGGIEVYRNWDTI KEKAGELKDNIANMVTNIILKWDSFKASTQEILGDVFSWIEGKWNSIKNTGAGVLEFYLG IFSKLQEKFDWLVNKGKSLLGIGEEPKNSPSGRALPKFATGGIVSSPTIAWVGEGGYSES IIPHDRSNRSLNLWEKTGQMIGAYDRSQQNSFQLVYSPTIQARDLQGVQQELKNSKEEAF REFKSMMREYEREQRRRGYGR >gi|224531369|gb|GG658183.1| GENE 67 41856 - 42065 151 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315918229|ref|ZP_07914469.1| ## NR: gi|315918229|ref|ZP_07914469.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 69 10 78 78 126 100.0 5e-28 MEDSWKYYSTHDGDTWDSIAYILLNDSKAMDYLQKWNEEFSEYFIFPAGITLRYKNLKII DIDVPPWRR >gi|224531369|gb|GG658183.1| GENE 68 42068 - 43144 782 358 aa, chain + ## HITS:1 COG:STM4208 KEGG:ns NR:ns ## COG: STM4208 COG3500 # Protein_GI_number: 16767458 # Func_class: R General function prediction only # Function: Phage protein D # Organism: Salmonella typhimurium LT2 # 19 334 20 321 347 100 26.0 4e-21 MFLDIEKNIKVARRASLIVFYEGKNISSEIHNQLISCSQNDSINDLDTLDLTLENRDGVW LSSWMPSKGEEIRILLQLENWGEIERIVAHDMGTFFIDTVDFSGPPDVVNIKAISYDINS DIVDKKENHVWENVDFKTILNDISKKRKIENICDISFNRKYLRIEQKLQSDFDFLKKLCE EAGYNFKLFNKKIIVFEEEKYEKADIKKVFTKNQLESYRFYTEDTDTYSSCTIRYYDYKL KKNVEKKFSIKDRSSYKKKNKRDLLINEDKHITGKNRVEKDKQLKEIAKKALKGKNKKEC KSTITFMGEEKLLSPGDTIFLNDFGKFSGKYLIDDIKINLLDYKMTAEMHKIMPMEVE >gi|224531369|gb|GG658183.1| GENE 69 43144 - 43659 509 171 aa, chain + ## HITS:1 COG:XF0719 KEGG:ns NR:ns ## COG: XF0719 COG4540 # Protein_GI_number: 15837321 # Func_class: R General function prediction only # Function: Phage P2 baseplate assembly protein gpV # Organism: Xylella fastidiosa 9a5c # 1 167 15 191 195 67 25.0 9e-12 MIRYGKVSSVFPERGTVKVVFEDLEIPSAEIPVLMGRTEKTKYYSLPKIGESGICIFPEN SFFGFYLGAGYDKATPVPSGAGEGVDVTIYADGTVIKYDENKSELYIDCKKTIKIIATEM EISSQKIKIAGDVDIDGTVNVTKDVVAKGVSLTTHVHSGISPGNSKTGGPE >gi|224531369|gb|GG658183.1| GENE 70 43661 - 44047 388 128 aa, chain + ## HITS:1 COG:no KEGG:Dred_1218 NR:ns ## KEGG: Dred_1218 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 2 127 1 128 129 69 32.0 5e-11 MLIGSLGNYIFVASSLYTKTFHSFSKETSVRWIEHKIMHEKPKLQFDGVELSQIKFTIHL NRFFNVNIQEEKKILEKYMKEGKVLRLILGGRKIGNYVITRISEDPKGYSAFGSVTKVEL GVELKEYN >gi|224531369|gb|GG658183.1| GENE 71 44047 - 44358 369 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467101|ref|ZP_05631412.1| ## NR: gi|257467101|ref|ZP_05631412.1| hypothetical protein FgonA2_06639 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 103 1 103 103 141 100.0 2e-32 MEIMVSSSEIKIYKFNRTIQEEIVQNIENIVTRIRGNIVLARQKGIDINHVDRPFEYIRA EIIADCVEEIEREEKRFQVESVEVIGEPSLAKIKIKIIGEVVI >gi|224531369|gb|GG658183.1| GENE 72 44355 - 45455 1122 366 aa, chain + ## HITS:1 COG:STM4202 KEGG:ns NR:ns ## COG: STM4202 COG3948 # Protein_GI_number: 16767452 # Func_class: R General function prediction only # Function: Phage-related baseplate assembly protein # Organism: Salmonella typhimurium LT2 # 5 337 7 342 371 164 29.0 3e-40 MNDFNFIELDTNEIKQQSKKAYEEIMKVKIQEGDPAEDFIDWVVYILSTTKNYVNFVGKM NLLRYSSGKYLDALGELMDVERIQERSSECLVEYTFSKIFDEEIIIPKGHKVSKGNLYFE SIEQIRLEIGRRKVTGKVRCLQSGVVGNEVEIGEINTIIDDIPYLLSVSNITKSTGGAIR EGDNSYRDRIRLKPKAFSVAGPYGAYQYHTITAHQDIIDTHIYTPQDTPGVVKVIPLLSL GKIPSKEILEIVRTRLDDESIRPLTDKVEVEAPKQHSYDIIGKYWIKKGEDVIFIKNKIE IALQEYIDWQKAKLGRDINPNKLIQLLIMAGAKRVELSDFTFVKLERNTVAKENTVNLKY QGEEDE >gi|224531369|gb|GG658183.1| GENE 73 45448 - 46011 462 187 aa, chain + ## HITS:1 COG:no KEGG:Sterm_2510 NR:ns ## KEGG: Sterm_2510 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 11 177 12 177 213 73 32.0 4e-12 MNNLQNSDYSEIFPENLKKYKNLRTFSNVIEKILKEYVLFDSEKIAIFYTLEFQKDKVLD EIAWGLNVDNYRSTLDRDIKISLIKGAYWIHANKGTKKAVIDQLKKLNYTIDIQEWFEYK GKPFTFRLVTKKQNNNPDEIKKIVQLIDSYKNVRSILDSIVISNEKEFKIYVGGYKKISV MQIKEWR >gi|224531369|gb|GG658183.1| GENE 74 46016 - 47311 817 431 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467104|ref|ZP_05631415.1| ## NR: gi|257467104|ref|ZP_05631415.1| hypothetical protein FgonA2_06654 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 431 1 431 431 808 100.0 0 MKFNGLTNEGKAYLAKIKTNHGTIEFKSMKFGDGSLLSYENPETFKRLKNQKSEKEILDK ISNGDTITLNAVVDNAALKHGYYLREIGIFVSDQGKEILFFYMNDGDETSFVPPETDGPY KAEIGINLVISNVKSIVVNNEVPDLYVTKAFVERKLKEKQDVIVWKSGGNLEKTNLTEND SSKLFTAKGALDLWNKLTSLIAEKEPKISKLNGFNLSKSDADDLDSSNTLATSKAVKKVK DALNRLNLNWNSITGKPNFGLKSGEFMEGHRLAESLGVKEYSGLISSYGQKIAGNAYYDS NTKKMFYCKETNSYTSANSTYFEPFDNKELLNRLNNLHKLFKKIIENDFIKITFFHDKDD QVCYGFVTVKRQFRIGSDRVVCDNPLHKAFGGIVTAKFKGNYEGYFFRGFFLTIEENHVY ADIENFTVYLK >gi|224531369|gb|GG658183.1| GENE 75 47513 - 48187 628 224 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467105|ref|ZP_05631416.1| ## NR: gi|257467105|ref|ZP_05631416.1| hypothetical protein FgonA2_06659 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 224 1 224 224 352 100.0 9e-96 MIIVHFYDSIKNVYSVWANSVSDVIENPQNYYHEYKEGMFITEAKLKHPIIKDRILREMS REECVSEGIEIELEEGEIILDKKLIKIHKPSKYHVWNGKEWRIDLEDIKDKINETWKNER QEKIDADLEYKGSMFQMREYIDVKNFEQRGLQIALGQKKLTDKEEWRLKDNTFKEFNYKE LLEIVGLWGDRKTRIWNDLKRMWKELEKAKSVEDIEKITWSEGI >gi|224531369|gb|GG658183.1| GENE 76 48259 - 48723 418 154 aa, chain + ## HITS:1 COG:no KEGG:Sterm_2506 NR:ns ## KEGG: Sterm_2506 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 144 1 140 142 109 44.0 3e-23 MYTLSKKSLEKLQGVHINLINFMKELIEISPWDFKITDGVRTATEQNKLYQSGRTIPGPW KTNCDGYKKISNHQTKIDGLGYAVDIGVLIKEKNGKIVYKGDWKDFHYYQDIYNTAKKVG LIEKYSIEWGGTWKNRKDGPHFQILGADNVPYQK >gi|224531369|gb|GG658183.1| GENE 77 48813 - 49196 339 127 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467107|ref|ZP_05631418.1| ## NR: gi|257467107|ref|ZP_05631418.1| hypothetical protein FgonA2_06669 [Fusobacterium gonidiaformans ATCC 25563] conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] conserved hypothetical protein [Fusobacterium gonidiaformans ATCC 25563] # 1 127 1 127 127 242 100.0 6e-63 MQNLINKGITYFGRFTQEQWIWMAVAGVILIYVLYNRKKYIGLFDNAVIMAETSFKYGEN KRKLNAAVKFVEVRTETLPIPAKLLIRHFLSRKRIIYTIEKTLQKFSDTFGSGRKIDIDE EEENGSN >gi|224531369|gb|GG658183.1| GENE 78 49183 - 49635 285 150 aa, chain + ## HITS:1 COG:no KEGG:Dde_1881 NR:ns ## KEGG: Dde_1881 # Name: not_defined # Def: hypothetical protein # Organism: D.desulfuricans # Pathway: not_defined # 11 124 25 136 139 101 46.0 9e-21 MEVTKLILHPLVNGEKNELYQEYVYEINGYQIKVPQGFVTDLASVPRIFWSIFPPFGKYT PAAIVHDFLYSKYNTTGINRTLADKVFLFIMEELGVGYLKRKAMYRAVRSFGERSWKEKL KNDGYKDKAVVDRTEEALIYYEKWNKILKL >gi|224531369|gb|GG658183.1| GENE 79 49820 - 50122 255 100 aa, chain + ## HITS:1 COG:lin0175 KEGG:ns NR:ns ## COG: lin0175 COG4824 # Protein_GI_number: 16799252 # Func_class: R General function prediction only # Function: Phage-related holin (Lysis protein) # Organism: Listeria innocua # 1 91 34 121 140 73 42.0 6e-14 MIIDYASGIMKAIYCKNLNSQIGFKGIIKKIMILMVITAAHQIDVLLGSEAMRINIRFIT ICFYCSNEVISLLENVAKMGLPIPQQLIDILEQCKNKQIK >gi|224531369|gb|GG658183.1| GENE 80 50280 - 51374 1091 364 aa, chain + ## HITS:1 COG:AF0477 KEGG:ns NR:ns ## COG: AF0477 COG0464 # Protein_GI_number: 11498088 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Archaeoglobus fulgidus # 81 315 162 396 409 144 36.0 3e-34 MYTEISKIIEGALSGDKEKVFNYSKILAKNLENTGELSLARKINNLLSKKKSGILSLDSL SSKPVDSESRMEMVDICYPIIDKESLILNNEILIEIQDFIKGYENRDKLLKSGIDDSCTL LMYGPPGCGKTTLAQYISMETGLPLITARLDGMISSLLGSTAKNIRKIFDFASRQECILF LDEFDVIAKIRDDKNETGELKRVVNSLIQNIDVFSRDSIIIAATNHHELLDPAIWRRFNR VLSIKKPTKEEIKKLVSVYINKSIIKFNIKKIDALTSSMLELSHSDITTIMNNSIRNALI NDKEEIVVFDILREVYLFVNHSISNEDDFITFLINGGVTHKELQIHGFSLRKIQTISKKV RSEQ >gi|224531369|gb|GG658183.1| GENE 81 51375 - 53711 1693 778 aa, chain + ## HITS:1 COG:FN2100 KEGG:ns NR:ns ## COG: FN2100 COG1404 # Protein_GI_number: 19705390 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Fusobacterium nucleatum # 246 619 18 373 416 224 38.0 6e-58 MEEKLPIKFFTKRDEDKQRVEGGGDKKLPKWVLEGNALYERSLTLLNCMGEILEEENWEE RKIPVIVQAKLNKDAHAKSHRKKIENIFFTDKNNVIGVADENTLIVRVDSQNDGIKIKKN IIDKKNNAYGISGIEDIIKYKPNIYKADNISNYKLKLFNFRDFSVNQSNKIKFEKLLKSK KIDYIKTNYTKSLIIYKLCNMSGLMINELMNDTLFDLTEEFVPMPAITMSLDSLDINRSF TIKDYDDSKKSEVVGILDNGICRVEPLRTWIYGERNSPYPDDLISEEHGTFIAGIIVYGD ELQGEEFVGSKNIRVFDAAVFPNTNKERIEEDELIENIREVIKNNHQKIKIWNLSISIMR EISDQKFSDFGIALDDIQDEYNVLICKSAGNCKKFSVGGILERLNEGADSVRSLVVGSIA DKKQGLDISEPYNLSPFSRRGPGPACIIKPDIVHFGGNAGIDESGRIVQGGVKSFSKEGN VIEQAGTSFSTPRVAALAAGLLNEMDEEFDALLLKGLIIHSANYPSNLEIPEVERTKYLG FGLPNTVHNILYNSPNEATLILRDVLPKGKFIDIKDFPIPDCLIKDGYYNFQVVVTLVYD PILDATQGFEYCQSNIDVKFGSYDEKIDRDTSKNCILNPVGRAGAKNVLKGSLYSKVKMK ESSEDFALKERMLIQYGDKYYPVKKYAVDLSELTEGNKLKYTTSNKKWYLTIDSTYRSSV EDRASINNEELSQEFCLIITIKDSSNTCNVYNGITQKLDEYNFWHSNIKISEKISINI >gi|224531369|gb|GG658183.1| GENE 82 54217 - 54600 481 127 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467112|ref|ZP_05631423.1| ## NR: gi|257467112|ref|ZP_05631423.1| hypothetical protein FgonA2_06694 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 127 1 127 127 202 100.0 7e-51 MEKQKLEKIETRIKELYQDTKEDHTLCGKYSKLLQVAKQVLEEEKEEGLLVKRLRIAEGK LTHSVLWNEASNLEVLFLVTQGEDFLGCATWKIPVEDQNNPEIFTEEAHGDKIAKWLKQE YLQEVFF >gi|224531369|gb|GG658183.1| GENE 83 54717 - 55616 1053 299 aa, chain + ## HITS:1 COG:FN1498 KEGG:ns NR:ns ## COG: FN1498 COG0697 # Protein_GI_number: 19704830 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 1 284 1 285 299 329 67.0 3e-90 MKKELQGVILVSLAAILWGFDSIALTPRLFHLQVPYVVFILHFLPFIGMTVLFGREEFQK IKQLDSHDLFYFFLVALFGGAVGTLSIVKALFLVNFQHLTVVTLLQKLQPVFAIILARIL LKEVIEKKFIFWALIALLGGYFLTFEGNVPSMEGNNIGLACLYSLLAAFSFGSATVFGKR ILKNASFRTALYVRYSFTSIIGFFIALFSGSFQSFAQTTGMEWLIFIIIGLTTGSGAILL YYYGLRYIPARISTICELCFPISSVIFDFLLNGKLLSMIQLVSAAIMLLAIYRITQKQK >gi|224531369|gb|GG658183.1| GENE 84 55626 - 57299 1815 557 aa, chain + ## HITS:1 COG:FN0220 KEGG:ns NR:ns ## COG: FN0220 COG3275 # Protein_GI_number: 19703565 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Fusobacterium nucleatum # 19 549 3 534 541 486 49.0 1e-137 MFTLMNHLLNNIGYIIAAAFLFTKIKSAIEGLREEERRNHIIYIFFFSALAIAGTYIGLD YKGSILNTRNIGVITGGLLLGPEVGILAGIFSAIHRILIPIGEATEIPCAIATILAGVFS GYLHNRYRESVKPMIGFFLAIIVESISMILILGFSSNFDESLDVVRSIYFPMSFMNSLGV YALISIIQNTLSTMEVNAGKQAKIALEIANKTLPYFQKGESLDSVCKIILESLDAKAVAI TDLEKIRASYVVEGIPKIEKTEIQSAFTKKVLELGKIMVFGKNNTGDLSDYLFLSKEIKS CIILPLFERGKVSGALKIFFDTPEKVTANNKYLAIGLSQLISTQLELEKLDALEDSARKA ELKALYSQINPHFLFNVLNTIASFVRIDPNKAREVIIDLSTYLRYNIENSMKFVPLEQEL EQVKAFVAIESARFGTKIKVHYEIEEKALESEIPSLSIQPLVENSIIHGLLPKRQGGNIW ISAKVKEEGTQIIIQDDGVGISESVIHSLEEEIGSSIGLKNVHHRLKLIYGKGLLVERLS EGTKISFWIYRQEVEKR >gi|224531369|gb|GG658183.1| GENE 85 57296 - 58000 828 234 aa, chain + ## HITS:1 COG:FN0219 KEGG:ns NR:ns ## COG: FN0219 COG3279 # Protein_GI_number: 19703564 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Fusobacterium nucleatum # 1 233 2 240 240 232 49.0 6e-61 MRCVIVDDEFPAREELKYFISKFPGTELTQEFGDSLDAFDYLQEHAKEVDVLFLDINMPE LNGLNLGKIIRKLNPAMKIIFVTAYREYAVDAFEIQAFDYLLKPYSEDRIEKLLSRLSVE KKQISNKVSISVGEKIMVFNTEDIIVVEADKKESRVYTTKECYLTKMKISDWEEQLPENQ FYRCHRSYLVNLSKVREIEPWFNNSFMIHMESCPVKIPVSRNNMKEFKSLFQVK >gi|224531369|gb|GG658183.1| GENE 86 58128 - 59561 2163 477 aa, chain + ## HITS:1 COG:FN0221 KEGG:ns NR:ns ## COG: FN0221 COG1966 # Protein_GI_number: 19703566 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Fusobacterium nucleatum # 1 457 1 455 474 599 73.0 1e-171 MFSFIGAVIALIVGYVVYGAFVDRVFGSTDAKVTPAKRMADGVDYVEMDWKKAFLIQFLN IAGTGPIFGAVAGAMWGPAAFIWIVFGCIFAGSVHDFLIGMLSVRQDGASVSEIVGKYLG ENARKLMVAFSIVLLVLVGVVFVKSPADILHNLTGIPTMVLLGIIIIYYLIATVLPIDQV IGRIYPIFGVCLLIMAVGIGFGIIFQGYAVNIPEITFHNFHPAGKSIFPYLCISIACGAI SGFHATQSPMMARCLRTEKEGRRVFYGAMISEGIVALVWAAAAMCYFGNIEGLAAAGSAA VVVDTISRGVLGPVGGALAILGVVACPITSGDTAFRSARLTIADAIGYKQGPVKNRFVIA VPLFAIGLALCFIPFAIIWRYFGWSNQTLATIALWAAAKYLEKHGKNFWIAVIPALFMTV VVTSYIICAPEGFAWVFGDMDIHVVEQIGIVAGIIVSALSGLLFWKTKTPAAEIEVE >gi|224531369|gb|GG658183.1| GENE 87 59753 - 60187 694 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736380|ref|ZP_04566861.1| ribosomal protein L13 [Fusobacterium mortiferum ATCC 9817] # 1 144 1 144 144 271 90 1e-71 MKKYTYMQRKEDVVREWHHYDAEGKILGRLAVEVAKKLMGKEKITFTPHIDGGDFVVVTN VAKMVVTGKKLTDKKYYNHSGFPGGIRERKLGEILDKRPEELLMLAVKRMLPKNKLGREQ LTRLRVFAGAEHTHEAQQPNKVEF >gi|224531369|gb|GG658183.1| GENE 88 60204 - 60602 576 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736381|ref|ZP_04566862.1| SSU ribosomal protein S9P [Fusobacterium mortiferum ATCC 9817] # 4 132 1 129 129 226 86 5e-58 MADMNQYRGTGRRKTSVARVRLIPGGQGVVINGKSMAEYFGGREILAKIVEQPLTLTETL DKYEVRVNVCGGGNAGQAGAIRHGVSRALVEADETLKAALREAGFLTRDSRMVERKKYGK KKARRSPQFSKR >gi|224531369|gb|GG658183.1| GENE 89 60732 - 61676 1279 314 aa, chain + ## HITS:1 COG:FN1397 KEGG:ns NR:ns ## COG: FN1397 COG2066 # Protein_GI_number: 19704729 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Fusobacterium nucleatum # 11 314 1 304 304 456 76.0 1e-128 MSHKKLLEGKMQELLQKIVEKNKELTNLGAVANYIPELDKANKNALGICVMDMEGNQFCY GECGTRFTIQSISKIISLMLAILDNGEEYVFSKVGMEPSGDPFNSIRKLETSSRKKPYNP LINAGAIAVASMIKGKNVRERFQRLLDFTRKITEDETVDVNYKIYCGESETGDRNRAMGY FLKGEGIIEGNVEEALDIYFKQCSMEVTVYTIAKLGLFLANDGVLSNGERVISTRLSRIV KTLMVTCGMYDESGEFAVRVGMPSKSGVGGGIVSVVPKKMGIGVYGPSLDKKGNSIAGAG VLEDLAKELDLSIF >gi|224531369|gb|GG658183.1| GENE 90 61737 - 63842 2186 701 aa, chain - ## HITS:1 COG:CAC2658 KEGG:ns NR:ns ## COG: CAC2658 COG3968 # Protein_GI_number: 15895916 # Func_class: R General function prediction only # Function: Uncharacterized protein related to glutamine synthetase # Organism: Clostridium acetobutylicum # 1 701 1 696 696 661 46.0 0 MKTMLEVFGIHCFSEKELKSRVPKDVFKSFKKVQSGKEELSITTANVIANAIKLWAIENG ATHFTHWFQPLTELTAEKHESFLSVHSDGTSITEFTGKELIKGESDTSSFPNGGLRSTFE ARGYTAWDIGSPMFLKGEGLSKSLYIPTAFIGYSGEALDKKVPLLRSISAVRKEALRIQK TLGDFDTRHIDVTLGVEQEYFLVEKKFFDLRKDLTLSGRTVFGNLPPKGQEMNDHYYGTI KERVEAFMTELDTELWKVGVMSKTKHNEVAPNQFEVAIMFNTANVAVDQNQITMDMIKKV ATRHHLTALLHEKPFHGINGSGKHCNWSLSTDTGKNLLDPSSLEENRFDFLLYVMAVMEG VYRYSGILRACTATPGNDYRLGGHEAPPAIISIFLGNELQQIFENIQHNNLSMTTQKDLL DLGSSFPKIPKDISDRNRTSPFAFTGNKFEFRMPGSSASPATPTFILNTIVADILKEYAD KLEQWENISPNVKVVKLIQEQYPKYKNILFNGNGYDKNWEVEAKALGLQNFKNTVEALPN YISEESIALFERNQVLTRVELQSRFQVYCERYNKQNNIEISSAIEIARNEIYPSVLAYIT KIAQNIDVLKSLVEETEYQEEKKLLKTLLTNKNEMLQSIHELVDGMKTATSIVDQYQRAQ YYSNTLIPKLADLRKVVDILEKESDKHTWPIPSYYDLLFNL >gi|224531369|gb|GG658183.1| GENE 91 63999 - 64268 475 89 aa, chain + ## HITS:1 COG:FN1782 KEGG:ns NR:ns ## COG: FN1782 COG1925 # Protein_GI_number: 19705087 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Fusobacterium nucleatum # 1 88 1 88 89 120 77.0 5e-28 MKTVKVEIKNKAGLHARPSSLFVQAVAKYDSEIKVRCDEEEINGKSIMGLMLLAAEQGRI LELTADGPDEEAMLAELVDLIEVKKFNEP >gi|224531369|gb|GG658183.1| GENE 92 64258 - 65133 835 291 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|34762725|ref|ZP_00143715.1| LytB protein; SSU ribosomal protein S1P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 7 288 3 284 827 326 57 0.0 MNHKVTIIRANKMGFCFGVMEAVRLCEDILQDPKNANKNKYILGMLVHNDFVVQSFEKKG FVTIEESEISSLEKGDIVVIRAHGITKEVQKQLEEKELDLYDATCIFVSQIKLKILWAIE QGYDIIFIGDKHHPEVKGITSYAKNIQIFASLEELKKVTIEKEKKYFLSTQTTLNQKKFL EIKKYMEENYSNVYIFNKICGATQERQKATESLAKEVDVVFVLGGKKSSNTQKLYEISKS LNPNTYLLEKEEDLEEAYLQGKSKIGLTAGASTPEEIIRNIENKIRGILDA >gi|224531369|gb|GG658183.1| GENE 93 65126 - 66763 1748 545 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|34762725|ref|ZP_00143715.1| LytB protein; SSU ribosomal protein S1P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 1 543 287 823 827 677 59 0.0 MLNGNENSNEFLEMLEDYLPAEKTGGKNQRVVGTINSIERNFVYLDVPGQRTVVRVRAEE LSEYNVGDQVEVVLVGLLEADDDQEVLIASRKRIDLEDNWKHIEDSYENKTVLSGRIVKK IKGGYIVEAALYQGFLPNSLSEINEKDGEAMVGKNIDVIVKDIKQDSRDKRSKKITFSKK DITLMKEGEEFAKLTVGDVVTCTVSGIMDFGLSVMIDHLRGFIHISEVSWKRLDDLRDLY TVGQTVEAKILSLDEEKKNIKLSIKQLTPNPWDLSKDAFHEGDEVEGKVTRVLAYGAFVE LTEGVEGLVHISDFAWNKKRINMEEYAKVGETVKVKILEFNPEGRKLKLGFKQLVENPWD VAEEKFAEGKELTATILDIKPFGLFAEIESGVDVFVHSSDFGWPGDEPANYQVGDTISFK VLELNVEDKKIKGSIKALKKSPWDKAMEEYKVGTTVEKKIKNIMDFGLFVELSKGIDGFI PTQFASKDFVKDLKDKFEIGQVVKAQIVEINQETQKIKLSIKKIELEEQKREDQDLLAKY GTAGE >gi|224531369|gb|GG658183.1| GENE 94 66817 - 67299 481 160 aa, chain + ## HITS:1 COG:FN1902 KEGG:ns NR:ns ## COG: FN1902 COG2131 # Protein_GI_number: 19705207 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Fusobacterium nucleatum # 3 158 15 170 174 262 75.0 2e-70 MKRKDYITWDEYFMGVALLSAMRSKDPNTQVGACIVSPDKKIIGLGYNGLPKGCEDDEFP WEREGEFLETKYPYVCHAELNAILNSTQSLKNCTIYVALFPCHECSKAIIQSGIREIVYL SDKYAETESNIASKRMLDSAGVVYRKLEKTCQNLYLSFES >gi|224531369|gb|GG658183.1| GENE 95 67296 - 67538 198 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467125|ref|ZP_05631436.1| ## NR: gi|257467125|ref|ZP_05631436.1| hypothetical protein FgonA2_06759 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 80 1 80 80 97 100.0 4e-19 MEKLILTCPHCHKKMKIQKKAAKYKCPHCSSICIISSIALFLLTIQNYIQFFTQKIKHKY QNVKNTYKYLKMLRDNQKKH >gi|224531369|gb|GG658183.1| GENE 96 67614 - 68216 798 200 aa, chain + ## HITS:1 COG:FN1901 KEGG:ns NR:ns ## COG: FN1901 COG0664 # Protein_GI_number: 19705206 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Fusobacterium nucleatum # 14 198 33 216 217 144 44.0 7e-35 MKKNWGNYAKLFSFKKGEAIFFRGEEVKGLHILAEGIAVAEMLKENGDVNQIEEMQGETF LASAFVFGGNPYYPVDLRAKTDCKIYFVPKEELIFVFQKEPEMLEKFVNDISSKAQFLSN RLWSQFQYKSIGSKLNQYLLSQEKEGKCCFDRSLKELAELFGVTRPSLSRVLGQYVEEGI LERNGRNQYKILDRESLEEN >gi|224531369|gb|GG658183.1| GENE 97 68243 - 68599 428 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257453278|ref|ZP_05618577.1| ## NR: gi|257453278|ref|ZP_05618577.1| hypothetical protein F3_09468 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_06769 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 118 1 118 118 196 100.0 6e-49 MDKKQVEELQSLLQKQNYTIIYVDFANPKNVIVSHSINDFSSIDLEHFAKFYVFNDNFMR VYSRKGPKHFDFYEIQKEDFDPGYDEKVFFVDYSQYKKLHMRVGKIDGKSAMQYLYFE >gi|224531369|gb|GG658183.1| GENE 98 68763 - 69455 503 230 aa, chain + ## HITS:1 COG:FN1600 KEGG:ns NR:ns ## COG: FN1600 COG0101 # Protein_GI_number: 19704921 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Fusobacterium nucleatum # 2 227 21 247 247 218 52.0 5e-57 MGFQRQPEKRTVQGEIEKCLFRILKEKIDLTSSGRTDRGVHAMHQVSNFFTAVNIPLDKL FYALSHCLPEDILLLELEEARKDFHARFSAKTRSYCYRITWKKSPFERRYKTYVKKKIDS QSFFKILEIFMGKHNFQNFRLQDDAFANPIREIYSIQVKEVDEGMDIYIEANAFLKSQIR IMLGTAFQVYFQKVESNRIEKMLKEPDKEFPKYLADPNGLYLYHIKYDEE >gi|224531369|gb|GG658183.1| GENE 99 69468 - 69920 662 150 aa, chain + ## HITS:1 COG:FN2046 KEGG:ns NR:ns ## COG: FN2046 COG0456 # Protein_GI_number: 19705336 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Fusobacterium nucleatum # 1 149 1 148 149 131 52.0 6e-31 MKFRELVEIDLEYLNKIVELEEEAFEGQGGVDLWILKALIRYGKVFVLEDKNGELVSVLE FMQVFEKKEAFLYGICTRKKYRRQGWAEYILDLGEKYLKEKFYHGIALTVDPKNEIAIHL YKNKDYKVLELQENEYGEGIHRLLMKKSLE >gi|224531369|gb|GG658183.1| GENE 100 69923 - 70033 69 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLLVNYYIIKYIIITKLTYKILYTIGGGIEHEYQN >gi|224531369|gb|GG658183.1| GENE 101 70017 - 70442 601 141 aa, chain + ## HITS:1 COG:FN2045 KEGG:ns NR:ns ## COG: FN2045 COG0735 # Protein_GI_number: 19705335 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Fusobacterium nucleatum # 1 141 3 142 142 193 70.0 1e-49 MNIRIDNVGEYLKEHGIKPSYQRMRIFQYLLDYHNHPTVDVIYKALCPEIPTLSKTTVYN TLNLFVEKKIVNVIIIEENETRYDLVSTTHGHFKCQECGAVYDVELKNTPFQAESLLEGC QVEEEHFYFKGICKNCMEKKH >gi|224531369|gb|GG658183.1| GENE 102 70463 - 70846 644 127 aa, chain + ## HITS:1 COG:AF0833 KEGG:ns NR:ns ## COG: AF0833 COG2033 # Protein_GI_number: 11498439 # Func_class: C Energy production and conversion # Function: Desulfoferrodoxin # Organism: Archaeoglobus fulgidus # 14 124 16 123 125 92 45.0 2e-19 MRNDFFKVAGSKKLLEVAVDGEGCLKEAIPGVEKLEVKSEDASTEKHVPYVEEQENGYLV KVGKETAHPMQDAHYIQFIEIAVDDNNLYRRYLNPGDAPEAFFAVPKGTKVVAREYCNLH GVWQYTK >gi|224531369|gb|GG658183.1| GENE 103 70933 - 71379 601 148 aa, chain + ## HITS:1 COG:FN1824 KEGG:ns NR:ns ## COG: FN1824 COG1227 # Protein_GI_number: 19705129 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Fusobacterium nucleatum # 1 126 1 126 538 161 65.0 5e-40 MEEVLVFGYKNPDTDSICSSIAMAALKRKQGFDAIACCLGSLSKETEFVLRKLSVETPKM LKTVSAQVMNLNYVEKSTICVEDSIQEALELMTKENFSSLAVVDMVGNFRNMVHISEIAN YTFSYDSGSKSLIFFHFLKKSLGFFRKV >gi|224531369|gb|GG658183.1| GENE 104 71455 - 71766 469 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736169|ref|ZP_04566650.1| SSU ribosomal protein S10P [Fusobacterium mortiferum ATCC 9817] # 1 103 1 103 103 185 90 1e-45 MASNKLRIYLKAYDHSLLDESAKKIVEVAKKSGAEVVGPMPLPTKIKKYTVLRSVHVNKD SREQFEMRVHRRMVELVNSTDKAIASLTAVNLPAGVGIEIKQI >gi|224531369|gb|GG658183.1| GENE 105 71917 - 72543 992 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237742672|ref|ZP_04573153.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13] # 1 208 1 208 211 386 91 1e-106 MSGILAKKIGMTQIFEDGKFVPVTVVEAGPNYVLQKKTEESDGYTALQLGFDEKKEKNTT KPLMGIFNKAGVKPQRFVRELKVDSVEGYELGQEIKVDVFSEVEYVDITGTSKGKGTAGV MKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVKVD AENNLLLIKGAVPGAKNGYLVIKPAIKK >gi|224531369|gb|GG658183.1| GENE 106 72572 - 73204 918 210 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736171|ref|ZP_04566652.1| LSU ribosomal protein L1E [Fusobacterium mortiferum ATCC 9817] # 1 209 1 209 210 358 86 1e-97 MAVLNIYDLAGNQTGTVEVNEAVFGIEPNKTVLHEVLTAELAAARQGTAATKTRAMVRGG GRKPFKQKGTGRARQGSIRAPHMVGGGVTFGPQPRSYEKKVNKKVRNLALRSALSAKVAN NQIVVLEGAVEAPKTKTIVNLVNKIDAKQKQLFVVNDLTDVKDYNLYLSARNLENAVVLQ PNEIGVYWLLKQEKVILTKEALTTIEEVLA >gi|224531369|gb|GG658183.1| GENE 107 73206 - 73493 390 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736172|ref|ZP_04566653.1| LSU ribosomal protein L23P [Fusobacterium mortiferum ATCC 9817] # 1 95 1 95 95 154 78 2e-36 MNAYDIIKKPVITEKSELLRKEYNKYTFEVNPKANKFQIRNAVQELFNVKVLTVATMNYK PVTKRHGMKLYQTSARKKAIVKLAEGHTITYFKEV >gi|224531369|gb|GG658183.1| GENE 108 73537 - 74367 1384 276 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237742669|ref|ZP_04573150.1| LSU ribosomal protein L2P [Fusobacterium sp. 4_1_13] # 1 276 1 276 276 537 93 1e-152 MAIRKMKAITNGTRHMSRLVNDELDKVRPEKSLTVPLKSAYGRDNYGHRTCRDRQKGHKR LYRIIDFKRNKLDIPARVVTIEYDPNRSANIALLFYADGEKRYILAPKGLHKGDVVKAGA SADIKPGNALKIKDMPVGVQIHNIELQRGKGGQLVRSAGVAARLVAKEGTYCHVELPSGE LRLIHGECMATIGEVGNAEHSLVNIGKAGRARHMGKRPHVRGSVMNPVDHPHGGGEGKNP VGRKSPLTPWGKPAIGVKTRGKKTTDKFIVRRRNEK >gi|224531369|gb|GG658183.1| GENE 109 74391 - 74666 468 91 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|19704962|ref|NP_602457.1| SSU ribosomal protein S19P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] # 1 91 1 91 91 184 93 2e-45 MARSLKKGPFCDHHLMSKVEAVVESGNNKAVIKTWSRRSTIFPNFIGITFGVYNGKKHIP VHVTEQMVGHKLGEFAPTRTYHGHGADKKKK >gi|224531369|gb|GG658183.1| GENE 110 74718 - 75050 508 110 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736175|ref|ZP_04566656.1| LSU ribosomal protein L22P [Fusobacterium mortiferum ATCC 9817] # 1 110 1 110 110 200 93 4e-50 MEARAITRYVRLSPRKARLVADLVRGKSALQALDILEFTNKKAARVIKKTLASAIANATN NFKMDEDKLVVSTIMINEGPVLKRIMPRAMGRADIIRKPTAHIIVAVSEK >gi|224531369|gb|GG658183.1| GENE 111 75073 - 75729 979 218 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736176|ref|ZP_04566657.1| SSU ribosomal protein S3P [Fusobacterium mortiferum ATCC 9817] # 1 218 1 218 218 381 83 1e-105 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDVKVREFVKKAYYHAGVSKVKLERT SPSQITVLISAGKAGIIIGRKGAEIESLRAKLEKMTGKKITVKVQEVKEFNKDAVLVAES IATQIEKRIAYKKAMTQAIGRAMKAGAKGIKVMVSGRLNGAEIARSEWAVEGKVPLHTLR ADIDYAVATAHTTYGALGIKVWVFHGEVLPTAKEGGEA >gi|224531369|gb|GG658183.1| GENE 112 75732 - 76157 675 141 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|34764031|ref|ZP_00144917.1| LSU ribosomal protein L16P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 1 141 1 141 141 264 90 2e-69 MLMPKRTKHRKMFRGRMKGNAQRGTTVAFGDYGLQALEPSWITNRQIESCRVGINRTFKR EGKTFIRIFPDKPITARPAGVRMGKGKGNVEGWVCVVKPGRILFEVSGVTEEKAKAALRK AAMKLPIKCKIVKREENGGEN >gi|224531369|gb|GG658183.1| GENE 113 76157 - 76339 291 60 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|34764030|ref|ZP_00144916.1| LSU ribosomal protein L29P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 1 60 1 60 60 116 100 5e-25 MRAKEIREMTSEDLVVKCKELKEELFNLKFQLSLGQLTNTAKIREVRREIARINTILNER >gi|224531369|gb|GG658183.1| GENE 114 76381 - 76632 385 83 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739375|ref|ZP_04569856.1| SSU ribosomal protein S17P [Fusobacterium sp. 2_1_31] # 1 83 1 83 83 152 91 6e-36 MRNERKVKEGIVVSNKMEKTIVVAIETMALHPIYKKRVKKTTKFKAHDEQNVAQVGDKVR IMETRPLSKDKNWRLVEIIEKAR >gi|224531369|gb|GG658183.1| GENE 115 76666 - 77034 576 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736180|ref|ZP_04566661.1| LSU ribosomal protein L14P [Fusobacterium mortiferum ATCC 9817] # 1 122 1 122 122 226 93 5e-58 MVQQQTILNVADNSGAKKLMVIRVLGGSKKRFGRIGDIVVASVKEAIPGGNVKKGDVIKA VIVRTRKETRREDGSYIKFDDNAAVVINNNNEPKATRIFGPVARELRAKSFMKILSLAPE VI >gi|224531369|gb|GG658183.1| GENE 116 77057 - 77398 486 113 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|34764027|ref|ZP_00144913.1| LSU ribosomal protein L24P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] # 1 113 1 113 113 191 84 1e-47 MAKPKIKFVPASLHVKTGDTVCVISGKDKGKTGKVVKVFPKKGKVVVEGVNVVKKHLKPS PVNPQGGVVEKAAAIFSSKVMLFDEKAGKPTRVKYEVRDGKKVRVSKKSGEII >gi|224531369|gb|GG658183.1| GENE 117 77417 - 77968 868 183 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739378|ref|ZP_04569859.1| LSU ribosomal protein L5P [Fusobacterium sp. 2_1_31] # 1 183 1 183 183 338 92 6e-92 MSKYVSRYHKLYNDVIVPKLMKDLEIKNIMDCPKLEKIIVNMGVGEATQNSKLMDAAMAD LTIITGQKPLLRKARKSEAGFKLREGMAIGAKVTLRKERMYDFLDRLVNVVLPRVRDFEG VSANAFDGRGNYSLGLADQLVFPEIDFDKVEKLLGMSITMVSSAKTDEEGRALLKAFGMP FKK >gi|224531369|gb|GG658183.1| GENE 118 77990 - 78277 451 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237743912|ref|ZP_04574393.1| SSU ribosomal protein S14P [Fusobacterium sp. 7_1] # 1 95 1 95 95 178 91 1e-43 MAKKSMIARDARRAELSEKYAEKRAELKKRVAAGDMEAMFELNKLPKDSAAVRRRNRCQL DGRPRGYMREFGISRVKFRQLAGAGVIPGVKKSSW >gi|224531369|gb|GG658183.1| GENE 119 78306 - 78701 612 131 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736184|ref|ZP_04566665.1| SSU ribosomal protein S8P [Fusobacterium mortiferum ATCC 9817] # 1 131 1 131 131 240 90 3e-62 MYLTDPIADMLTRIRNANAVMHEKVDVPFSKMKERIAEILKEQGYISNYKIVTDGTKQNI RVYLKYDGKERVIKGIKRISKPGRRVYSSVEDMPRVLSGLGIAIVSTSKGIVTDKVARME NVGGEVLAFVW >gi|224531369|gb|GG658183.1| GENE 120 78725 - 79258 744 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237743914|ref|ZP_04574395.1| LSU ribosomal protein L6P [Fusobacterium sp. 7_1] # 1 177 1 177 177 291 79 2e-77 MSRVGKKPIVVPAGVEVKIDGHKVTVKGPKGTLEKEFNQELTIKLENGEVVVERPNDEPK VRAIHGTTRALIQNMVSGVSEGFKKSLTLVGVGYRAAVKGKGLELSLGYSHPVIIDEIPG ITFTVEKNTTILVEGIEKDLVGQIAANIRSKRAPEPYKGKGVKYTDEHIRRKEGKKA >gi|224531369|gb|GG658183.1| GENE 121 79285 - 79647 485 120 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736186|ref|ZP_04566667.1| LSU ribosomal protein L18P [Fusobacterium mortiferum ATCC 9817] # 1 120 1 122 122 191 80 2e-47 MFKKVNRASVREKKHLAIRNKISGTAERPRLSVYRSNNNIFAQLIDDVNGVTLVSASTIM KGMKVENGGNVEAAKAVGKAIAEKAVEKGIKEVVFDRSGYKYTGRIAALAEAAREAGLSF >gi|224531369|gb|GG658183.1| GENE 122 79674 - 80177 757 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736187|ref|ZP_04566668.1| SSU ribosomal protein S5P [Fusobacterium mortiferum ATCC 9817] # 1 167 1 167 167 296 89 5e-79 MSKFANREEKQYQEKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDA IRKAIASAKRNIVEVSLKGGTVPHEIVGKWGATSLWMAPAYEGTGVIAGSASREILELVG VKDILTKIKGSRNKHNVARATVEALKLLRTAEEIAALRGKEVKDILS >gi|224531369|gb|GG658183.1| GENE 123 80192 - 80377 273 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237743917|ref|ZP_04574398.1| LSU ribosomal protein L30P [Fusobacterium sp. 7_1] # 1 61 1 61 61 109 88 6e-23 MSKLRIELVKSMIGRKPNHIATLKSLGLKKMHDVVEHTMTPELKGKLAQVEYLLKIEEVQ A >gi|224531369|gb|GG658183.1| GENE 124 80377 - 80859 627 160 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736189|ref|ZP_04566670.1| LSU ribosomal protein L15P [Fusobacterium mortiferum ATCC 9817] # 1 159 1 159 159 246 76 6e-64 MKLNELTPSVPRKARKRVGRGESSGWGKSAGKGSNGQNSRAGGGVKPYFEGGQMPIYRRV PKRGFSNYPFRKEYALVSLDALNKFEDGATVCPDCLAEMGIIKCACSLVKVLGNGELTKK LTIKAHKITKSAQAAIEAKGGSVEVIEVKTFADVAGNNKK >gi|224531369|gb|GG658183.1| GENE 125 80898 - 82178 902 426 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 16 426 19 437 447 352 44 7e-96 MTLLEKFNSKLSSIMKVPELRDRILFTLLMFLVARIGTFIPAPGVDTDRLAAMTAQNDIL GYINMFSGGAFTRVSIFALGIIPYINASIVVSLLAAIIPQIEEIQKEGEAGRNKITQWTR YLTIAIALVQGFGVCMWLQSVGLVFDPGILFFLTTIATLTAGTVFLMWVGEQISVKGIGN GVSLLIFLNVISRGPSNIVQTIQTMSGSKFLIPVLLAVAAAGILTIMGIVVFQLGQRKIP IHYVGKGFNSRGGMGQNSYIPLKLNSSGVMPVIFASVLMMIPTVMINAIPSKYAIKTTLS MMFNQQHPVYMIVYALVIVFFSFFYTAIVFDPEKVADNLKRGGGTIPGIRPGIETVEYLE GVVTRITWGGALFLAAISILPFAIFSALGLPVFFGGTGIIIVVGVAIDTVQQIDAHLVMR DYKGFI >gi|224531369|gb|GG658183.1| GENE 126 82452 - 84077 2194 541 aa, chain + ## HITS:1 COG:FN1499 KEGG:ns NR:ns ## COG: FN1499 COG5295 # Protein_GI_number: 19704831 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 168 541 58 479 479 92 25.0 2e-18 MLEEKSVKHWLKRKVKFTEALLVAFLITGGIAGAEESIHYHSTNDNGIHTSENYNNDGAK AKNAVVIGIGSTSDGVNSIVLGNNTKVTKNTKNPEDDNSSVVVGNNLDVDGVHNVIVGTD YHNYDQKFTKINGDHNAVLGTGNLIGYTAKQNGNSWSYTKSENRYDQNTVVGMNNTVNTN GNTVLGSSNEIKNNGSVISVGSGNVVGGTIINDSGKEEGVGYKSGVFGHDSSVSHNEAFV FGNNSKATAMEAFVLGNSSENTGENSIVLGNYAKNESIGGSVLGSGAENRGKWGTALGGW SNVTVDYGVALGALSTANTSRGIDGYDPSGNSADNSSTWRSTLAAVSIGDSKEGYTRQIT NVAAGTEDTDVVNVAQLKALKTGVQEEITEVKKISETLQSSVREVHSESKRIGALSSALA ALNPMEYDPMKPNQVLAGVGSYKNSQAVAVGMSHHFNENLRVQAGVSVSEGRRTESMVNL GLAWKIGKDDRDDSYNKYKEGPISSIYVLQDEVIFLKQANQKKDKEIDELKMLVKKLMSE K >gi|224531369|gb|GG658183.1| GENE 127 84171 - 84803 998 210 aa, chain + ## HITS:1 COG:FN1298 KEGG:ns NR:ns ## COG: FN1298 COG0563 # Protein_GI_number: 19704633 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Fusobacterium nucleatum # 1 210 2 211 211 312 76.0 3e-85 MEMNIVLFGAPGAGKGTQAKFIMDQYEIPQISTGDILRQAIANKTTLGLEAKKFMDEGKL VPDSVVNGLVAERLEQADCKKGFIMDGFPRTVVQAEELDKILEKLNRKIEKVIALNVKDE DIVERITGRRTSKKTGKIYHMTFNPPVDEDPADLVQRADDTKEVVEKRLSTYHEQTAPVL DYYKAQNKVSEIDGSQQMEEITKQIFSILG >gi|224531369|gb|GG658183.1| GENE 128 84825 - 85583 1376 252 aa, chain + ## HITS:1 COG:FN1297 KEGG:ns NR:ns ## COG: FN1297 COG0024 # Protein_GI_number: 19704632 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Fusobacterium nucleatum # 2 252 3 253 254 398 76.0 1e-111 MILKSLEEIKEIEKANQIIARLYRDVLPPYIKAGISTKELDKIVDDYIRSQGAIPGCIGV QGMYNEFPAATCISVNEEVVHGIPGDRILQEGDIVSVDTVTILNGYYGDSAYTYAVGEID EESKKLLEVTKKSREIGIEQAIVGNRLGDIGHAIQKYVEKEGFSVVRDYAGHGVGLAMHE DPMVPNYGRAGRGLKIENGMVIAIEPMINVGTYKVVLHPDGWTVSTKDGKRSAHFEHSIA IVDGKPIILSEF >gi|224531369|gb|GG658183.1| GENE 129 85664 - 85885 266 73 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 [Mycobacterium tuberculosis H37Rv] # 1 72 1 73 73 107 69 4e-22 MSKKDVIELEGTILEALPNAMFKVELENGHTILGHISGKMRMNYIKILPGDGVTVQISPY DLSRGRIVYRKKN >gi|224531369|gb|GG658183.1| GENE 130 85906 - 86019 199 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237736194|ref|ZP_04566675.1| 50S ribosomal protein L36 [Fusobacterium mortiferum ATCC 9817] # 1 37 1 37 37 81 97 2e-14 MKVRVSVKPICDKCKVIKRHGKIRVICENPKHKQVQG >gi|224531369|gb|GG658183.1| GENE 131 86212 - 86568 576 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739948|ref|ZP_04570429.1| SSU ribosomal protein S13P [Fusobacterium sp. 2_1_31] # 1 118 1 118 118 226 94 5e-58 MARVAGVDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTEEEVNKIREII NGIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPIRK >gi|224531369|gb|GG658183.1| GENE 132 86600 - 86989 632 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|19704620|ref|NP_604182.1| 30S ribosomal protein S11 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] # 1 129 1 129 129 248 92 1e-64 MAKKTVAKVKKKSKNIPNGVAHIHSTFNNTIVAITDTEGKVISWRSGGTSGFKGTKKGTP FAAQIAAEQAAGVAMENGMKKVEVRVKGPGSGREACIRSLQAAGLEVTKITDVTPVPHNG CRPPKRRRV >gi|224531369|gb|GG658183.1| GENE 133 87039 - 87626 905 195 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237744174|ref|ZP_04574655.1| SSU ribosomal protein S4P [Fusobacterium sp. 7_1] # 1 195 1 195 195 353 88 3e-96 MARNRQPVLKKCRNLGIDPVILGVNKSSNRSLRPNANRKPTEYAIQLREKQKAKFIYNVM EKQFRKLYDEAARKLGVTGLTLIEYLERRLENVVYRLGFAKTRRQARQIVSHGHITVNGR RVNIASYRVKVGDVIAVVENSKNLEIIKSAVDTANAPAWLQLDKAAFAGKVLQNPTKDDL DFDLNESLIVEFYSR >gi|224531369|gb|GG658183.1| GENE 134 87654 - 88634 1354 326 aa, chain + ## HITS:1 COG:FN1283 KEGG:ns NR:ns ## COG: FN1283 COG0202 # Protein_GI_number: 19704618 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Fusobacterium nucleatum # 1 325 17 342 342 482 81.0 1e-136 MLKIEKHARGIHITEVRESEFKGQFVVEPLYRGYGHTLGNALRRVLLSSIPGAAIKGIRI EGVLSEFSVMDGVKEAVTEIILNVKEIVVKSETAGERKMTLSVKGPKVVTAADIIPDIGL EIINPDQEICTITTDRELDIEFLVDTGEGFVVSEEIERDGWAVDYIAVDAIYTPIRKVSY DIQDTMVGRMTDFDKLTLSVETDGSIEIRDALSYAVELLKLHLDPFLEIGNKMENLRVEV EEEVENQSSSIKDDINLNIKIEELDLTVRSFNCLKKAGIEEVGQLSKLSMNELLKIKNLG RKSLDEILEKMKELGYDLAQNGSAES >gi|224531369|gb|GG658183.1| GENE 135 88657 - 89007 547 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237739944|ref|ZP_04570425.1| LSU ribosomal protein L17P [Fusobacterium sp. 2_1_31] # 1 116 1 116 116 215 93 1e-54 MNHNKSYRKLGRRADHRKAMMKNMTISLLTSERIETTVTRAKELRKFAERMITFGKKGTL ASRRNAFAFLRSEEAVAKLFNELAPKYADRNGGYTRIIKTSVRKGDSAEMAIIELV >gi|224531369|gb|GG658183.1| GENE 136 89322 - 90128 1253 268 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467165|ref|ZP_05631476.1| ## NR: gi|257467165|ref|ZP_05631476.1| hypothetical protein FgonA2_06959 [Fusobacterium gonidiaformans ATCC 25563] # 1 266 1 266 266 294 100.0 4e-78 MKDNLEKSLKRWLKRKISITLAVVTVFAITGSVGFAATAELDGNNTFTGNNTFTGNTTLK ATETGNALVKGTLGAGTNGDKFVVDANGNTIVKGTLGAGTNGDKFVVDANGNTTVKGTLG AGNTTVKGTLGAGADGDKFTVDAAGNTAVKGTLEVEEKTTLKETETGNTTVKGTLEVEEK TTLKETETGNTTVKGTLGVEGKTTLKETETGNTTVKGTLEAEGKTTLKADVDMSSQDKKN TVKIDNNGLNITLEKDSVENVKGNKTSS >gi|224531369|gb|GG658183.1| GENE 137 91209 - 92378 1752 389 aa, chain + ## HITS:1 COG:FN0471 KEGG:ns NR:ns ## COG: FN0471 COG5295 # Protein_GI_number: 19703806 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 151 383 25 268 340 137 43.0 3e-32 MVSVGMDQEVEIGRNSKETVKGNKTSTVETDSTEIVKNIKKEEYGELNTTVTGNSTETVT GGNKKVSVDENHTIENKVENGSSLTMDNEKSVFRKDLYVGSQEVVSKNLQLSDKDAIQIG KAIEIAGVPIANSAEEGGHNIALGYGNGVAGKKGLATGYNNIVEGIEATAIGANNVAKAD YSTAIGNGNRVVGKNSTAVGTKNEVTGDNSGAFGDPNYINADNSYAIGNNNKIEEGADKN FILGNDVHIQKGVQGSVALGDGSVVTQSNEVSVGSKGNERKITNVADGAVNEHSTDAVNG RQLYHVSQKVSSVAALGAALAAVDFGDAPVGKLGVGAGVGHFVDQQAIAVGVAYAPNEDF KMNAKWAATSGKLRYNSISVGATYYIDLK >gi|224531369|gb|GG658183.1| GENE 138 92701 - 93246 638 181 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_0484 NR:ns ## KEGG: Ilyop_0484 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: I.polytropus # Pathway: not_defined # 1 130 1 128 197 68 32.0 2e-10 MGRNILFEKKDIVKAAFILLKQQTVDEFTIRNIANILNSSTSPIYYHFKSLEELMDAMIE EVMDLFLAPVKDKEDYYSYPNLTLAYALFSKNHRKLFESIFLYSSPKLGNPFREKMYREF RQLLTKDKKFDMVNGYVDLLFGDGLALKVYNSINKDTMEGEILDLLEKYITLRRKLEEVI S >gi|224531369|gb|GG658183.1| GENE 139 93271 - 93810 504 179 aa, chain + ## HITS:1 COG:FN1004 KEGG:ns NR:ns ## COG: FN1004 COG1309 # Protein_GI_number: 19704339 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 133 1 127 188 62 28.0 4e-10 MGRKIEFQKIEIEKAAFFLLEQEGIENFTIRNIARILNSSTSPIYYHFKSLEEIENTMAD KIVDIFLNFVKNKQETDPFSKLTIAFALFSKQYRKLFESIFLHSNTKGENSFRSKIYDRV FSLIETEDKKFNRNDNLVDLLFGHGLALKAYHNYNLDFIEEEVYKLMDAYILMRKERSK >gi|224531369|gb|GG658183.1| GENE 140 93853 - 94404 553 183 aa, chain + ## HITS:1 COG:FN0241 KEGG:ns NR:ns ## COG: FN0241 COG0262 # Protein_GI_number: 19703586 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Fusobacterium nucleatum # 26 180 6 164 164 150 49.0 1e-36 MKYSKRYAIIISNNEQEEVKNLSPNYERLKMIVCVGENNLIGDKDPSGNGLLWHSKEELL YYKSITTGQVTLFGENTAKFVPIHLMKKTREVLILTMDSNIEDILQQYPEKDVFLCGGAT IYRYYLEHYPIAQVYVSKLKKHVEVAEAKNPLYFPDLESLGYVCVKETEYEDFIACIYEK KRA >gi|224531369|gb|GG658183.1| GENE 141 94417 - 95640 1233 407 aa, chain + ## HITS:1 COG:CPn0528 KEGG:ns NR:ns ## COG: CPn0528 COG1301 # Protein_GI_number: 15618439 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Chlamydophila pneumoniae CWL029 # 14 394 7 394 414 156 28.0 7e-38 MKEKKGKISFPIILLTGIIVGSLIGVVFREKAVVLKPLGDIFLNLMFTAVVPMVFVSIAT AVGNMVNMTRLRKILFSTVLTFIGTGLIASVYVFIAVKVFPPAVGTKIALQSTTMQEAKS SADLLVSSFTVPDFIDLLSRRNMLPLIIFATLFGFCVSHCGGEESPIGKVLNNLNDIMMK LINLIMWYAPIGLGAYFASLVGEFGPNLIGDYGRTLLIYYPLCLLYFFTAFPFYAFLAGG KEGIKRMFQYIYSPAITAFATQSSMATLPVNMETCKKIGVPKDISDLVLPMGATMHMDGS VLSSIVKISFLFGIFQTPFTGIETYFLSIVVSILAAFVLSGAPGGGLVGEMLIVSLFGFP PEAFPLIATIGFLVDPPATSLNASGDTIASMLVARMVEGKDWLHRHI >gi|224531369|gb|GG658183.1| GENE 142 95684 - 95887 426 67 aa, chain - ## HITS:1 COG:lin1401 KEGG:ns NR:ns ## COG: lin1401 COG1278 # Protein_GI_number: 16800469 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Listeria innocua # 1 66 1 66 66 80 68.0 6e-16 MLKGTVKWFNNEKGFGFITGEDTVDYFVHFSGIAGEGFKSLEEGQAVTFEVSEGKKGPMA VEVTKAN >gi|224531369|gb|GG658183.1| GENE 143 96118 - 96933 1140 271 aa, chain + ## HITS:1 COG:FN0619 KEGG:ns NR:ns ## COG: FN0619 COG0668 # Protein_GI_number: 19703954 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Fusobacterium nucleatum # 12 271 9 272 281 282 57.0 6e-76 MNQIFLELSKMLTELLPYLFLKGISLLALIVIFPKLVKYFIRFLDKVMLRRGLDDLLMSF TESFVSTLGYIILFFSAVGILGVKATSLMAVLGTAGLAVGLALQGSLSNLAGGVLILFFK QFTKGDYIAIASGQEGTVQSIRILYTTLVTVNNQLIIIPNSQLANGYIINYSTNPERRMD LTYSASYDDKVDDVIAVLTKIAESHPKVLKNKPITIRLKQHSASSLDYMFRVWTLQEDYW DTMFDFNETVRKEFDKHGIEIPYNKLDIYTK >gi|224531369|gb|GG658183.1| GENE 144 96955 - 98415 2442 486 aa, chain + ## HITS:1 COG:FN1231_3 KEGG:ns NR:ns ## COG: FN1231_3 COG0516 # Protein_GI_number: 19704566 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Fusobacterium nucleatum # 203 486 1 285 285 462 84.0 1e-130 MNGKILKEAITFDDVLLVPARSEVLPHQVSLKTRLTKKITLNVPILSAAMDTVTESDLAI ALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMITNPITLNQESTVMQAEEIMRRYKIS GLPVIEEDGKLIGIITNRDIKYRKDMNQLVGEIMTKEKLITAPVGTTLDEAKEVLLANRI EKLPITDEEGYLKGLITIKDIDNIIQYPNACKDEKGTLRCGAAVGIGPDTLDRVKALVEA GVDIITVDSAHGHSKGVIEMVRKIREAFPDLDLIGGNIVTAEAAKDLVEAGANAVKVGIG PGSICTTRVVAGVGVPQLTAVNDVYEYCKNQGIGVIADGGIKLSGDIVKALAAGADCVML GGLLAGTKEAPGEEILLEGKKFKSYVGMGSIAAMKRGSKDRYFQTETDAQKLVPEGIEGR IAYKGAVKDVVFQLCGGIRAGMGYCGTPTIERLQVEGRFMKITGAGLLESHPHDITITKE APNYSK >gi|224531369|gb|GG658183.1| GENE 145 98426 - 99175 1046 249 aa, chain + ## HITS:1 COG:FN1230 KEGG:ns NR:ns ## COG: FN1230 COG2849 # Protein_GI_number: 19704565 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 89 247 2 161 162 155 50.0 8e-38 MKMKQCMGIFLIMSSCLFAEIREITPLSEFSSVLLGETVQKNTKPEKVISHNAEEKKSVS TMSGIPKHSRNISQKDTSQFIDISEQDNRNGVIYRQGEESPFTGVFALFMGDWIQYIETY KNGKLDGESSWYSQNGTQILLEQYQAGKLHGNQLSYYENGNPKAEVMYDKGKITGVISFS KDGKEIHKSIFNNGTGIWKLYWENGNVLEVGKYTNFRKDGIWKKYNEDGSLESTLEYQNG RLLKETWGE >gi|224531369|gb|GG658183.1| GENE 146 99187 - 99642 573 151 aa, chain + ## HITS:1 COG:no KEGG:NT01CX_0673 NR:ns ## KEGG: NT01CX_0673 # Name: not_defined # Def: hypothetical protein # Organism: C.novyi # Pathway: not_defined # 1 151 1 151 151 197 65.0 1e-49 MIGREPQKENDLFFTCALIDYIARKTKNKRVAIVDSLGKERLHKIYDLADIYHSDNLERV CDDFIQEAKILNGNFDNVKDAKYMVPSHWDIAKVYKRLILGIAKEKNIEIIEALMEAYHS FVSDLIDDYNSSFYYDAPQNILNTFLYGVVE >gi|224531369|gb|GG658183.1| GENE 147 99799 - 100812 1185 337 aa, chain + ## HITS:1 COG:FN0113 KEGG:ns NR:ns ## COG: FN0113 COG1420 # Protein_GI_number: 19703461 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Fusobacterium nucleatum # 1 337 12 350 351 375 60.0 1e-103 MGISDREKLVLNAIVNYYLTFGDTIGSRTLVKKYGIELSSATIRNVMADLEDMGFIGKTH TSSGRIPTDKGYRYYLNELLKVERLSQQERESIEGFYEERIGELDKLLETTSSLLSKLTS YAGIAVEPRIVDSEIHRVELIHIDEYFVMAVIIMKDRRVKTKKIHLINPLSEKELGSIAK ELNERIQYEHLTVKEIEEFILGGDMIQSSETSMEDLNRFFIDNVTSMFKERDVDSASEVL DFLSEKKDIRQMFGRLIQKRENIGQGVQVIFGDELGIKELEDYSFVYSLYQLGGAQGIIG VIGPKRMAYSKTVGLLDCVTKEVNRAIDRIEKKEVKK >gi|224531369|gb|GG658183.1| GENE 148 100809 - 101369 936 186 aa, chain + ## HITS:1 COG:FN0114 KEGG:ns NR:ns ## COG: FN0114 COG0576 # Protein_GI_number: 19703462 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Fusobacterium nucleatum # 36 185 51 199 199 140 64.0 9e-34 MTDEAKKEEVLEEVKEEILEAEEVKEETTEKTLSPEEEIGKLKAEIEDWKQSYLRKQADF QNFTKRKEKEIDELRQYSSQKIVEKLLGSLDNLERAISAAKETNDFDGLVQGVEMILRNI QDVMKSEGVEEIEALGKEFDPMFHHAVMQEDSPEFKDNEVMLELQKGYKMKDKVIRPSMV KVCKKS >gi|224531369|gb|GG658183.1| GENE 149 101407 - 103224 3013 605 aa, chain + ## HITS:1 COG:FN0116 KEGG:ns NR:ns ## COG: FN0116 COG0443 # Protein_GI_number: 19703464 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Fusobacterium nucleatum # 1 605 1 607 607 933 88.0 0 MAKIIGIDLGTTNSCVAIMEGGSATIIPNAEGARTTPSVVNIKDNGETIVGEIAKRQAVT NPNSTVSSIKTYMGSDHKVEIFGKKYTPQEISAKTLQKLKKDAEAYLGEEVKEAVITVPA YFTDAQRQATKDAGTIAGLEVKRIINEPTAAALAYGLEKKKEEKVLVFDLGGGTFDVSIL EIADGVIEVISTAGNNHLGGDDFDKKIIDWMVTEFKKETGLDLSSDKMAYQRLKDAAEKA KKELSTMMETPISLPFITMDATGPKHLEMKLTRAKFNDLTRDLVEATQGPTKTALSDASL QPGEIDEVLLVGGSTRIPAVQEWVEAYFGKKPNKGINPDEVVAAGAAIQGGVLMGDVKDV LLLDVTPLSLGIETLGGVFTKMIEKNTTIPVKKSQVYSTAVDNQPAVTINVLQGERSRAA DNHKLGEFNLEGIPAAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKENKVTISGSTNLSK EEIDRMTKEAEANAAEDKKFEELIAARNQADMLISSTEKSMKDHADKLGEEDKKNIEAAI EELKKVKDGDSKEAIDQAVEKLSQAAHKFAEELYKDAQAQQAQGAAGNTGAGSANEDVAE AEVVD >gi|224531369|gb|GG658183.1| GENE 150 103405 - 108183 5638 1592 aa, chain + ## HITS:1 COG:PM1570 KEGG:ns NR:ns ## COG: PM1570 COG5295 # Protein_GI_number: 15603435 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 933 1488 699 1202 1299 87 28.0 1e-16 MISKNSILKNLEKYLKRSFKGKVRINESSLIAYLLVGGFFCFVSNVGYATVAKKEEIKYL STGSETTDGLAINFAQALGNSQTIAIGGNDHDNKKGNAIAKGGGSIAVGGNSRTDGATAV AVGWHAEAKGDNSTAYGESTVAAKDSVAIGSKAKAAENSRLGNAVAVGVEAEAKEGATAL GAKSKAKGDNAISVGRDSKAFSNESIVVGHNAEATANASQSVTVGYKAKTEGQNGVTIGT ETSSIGNNSVVIGKGSKVEKLTPEDQVDGVEDYSKLAFDSAVVIGNDAVAKQQYAIVMGQ KATGLGEDSFAFGRNSNARKNRSIAFGKETLTNGENAIAFGERAQAYSVNSVSIASGAKS KGEQALAFGSQSNSNGQDSIAIGTKAMVGKDIKPGDDKGMVNDGTALGGYSKVISKEGTT LGAHSSVSSEGGVALGAKSNADRERVMNASEVYLGSDTNVKGTVKGSLGAVSVGNSTETR QIVNVAAGAQDTDAVNVAQLKAVESMIKNKEDSYSSWEIQGNGTKVNDVKSKNQVDFVSG DGTTAEVQKSSESKTTVKYSVNKSTLTVDPSGKVSTEEKKDGDYFATAKDVAKAINESEK TTTVVSKDEKLLKVTSQQDKTKPLNTEYTISLGDTAKKAIEDVTKNKITVKGGENEANSF VVSDGGSIDVVAEEKDGIVNVGVDSKRKAITVGIDKTKFATEVTNNTTVQNNVNSIKNLQ STTIALAGNSGETDPQSLSKQQVKFTIKGEGIESIAKGETVTLSIKDNAITKQKLSDDVQ LNFSGNGGKGAVKVKDGTFEIKGENGIVTDASNSKLVVKIADETKKKIDNAADNNLSNIT DSGKTVIHNAIAMENGENTTVSHTIKNGVKTFKVDVKADGKIENGNNKIVTGDTVYKAIE ENKTRYYSVNVKDEDKEKEGSNYKNDGATAEYALAAGPYAKATAKNASAFGYHAEATKED SVALGAYSTTNEEVSEVNEVKGEKLTFGAFAGNKPTSQVSVGSSGKERQIKHVAAGAVTQ NSTDAVNGSQLHATNLILEAVADSTKNIIGGPTQLNSNGTISVPDGKGIANTTKKTVHEA IIQARTTVTGDSMIDAEDEEKNGAHNYKLSLKNNSITEEKLSDAVKNKIEKTFTVSANSG AKDTVKKEENIDFSNTDGNITIGYDAANNKFTHDLSKNLQNIDTIGGNGSKISFVNKTIS VNNSRITNVADGTEDTDAVNKGQLDNAIKAGKTKVVKGTNIASVEETIDPTTKAATYKVN AEGAKVTGVGGVEVTESKDNTTNVTTYKVGLADKVTLGKDGKAITLDGTTGKVNVGNVEV NGEKGTIGGLANKTWNPNNIVSGQAATEDQLKVVDEKVEKGLNFAANHGDVYNAKLGATV AVKGNDKVSKEDAESKYDVENVVTTVDKDGNIQIKMAKNAKFTTVTTGNTTISNSGMVIQ KGKAEENVSLTDKGLNNGGNKITNVADGTVEKDSKDAVNGGQLHEVKQDAKAAKTEVTST GKTLQVTKQAATDGHTIYNVEVRQNVKYVTEDGKEVILGTDRNFYHPEDLKEDGTPVDAN KAIPKDKVKAKLEEEAKLDNISGGKIADGLAS >gi|224531369|gb|GG658183.1| GENE 151 109834 - 110721 1203 295 aa, chain + ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 58 279 1996 2214 2712 74 38.0 2e-13 MAAGDVSANSTDAVNGGQLHAVKQDVKAAKTEVKAGDSGNVTVNKSEDTTDKHPVYTVDM KKDITLDKLTVKDEEHNKTEVTPGKVSVDGKNGSGVTLNGADGSIGLKGENGKDALSIKG EKGQAGVDGKNGTDGKTRIVYEYADPKNPGTKVREEVATLNDGIKYKGDSGEAYTKLNKE TKIVGGQTDSNKLSDNNIGVVASQEGDNAKLTVKLAKELKDLTSVETKDEEGNKTVQNSK GTTITDKDGNKTEITKDGMTITPKDLETGKTAVSLTKDGLNNGGNKITHVADLAS >gi|224531369|gb|GG658183.1| GENE 152 111390 - 112397 1292 335 aa, chain + ## HITS:1 COG:no KEGG:Acfer_0035 NR:ns ## KEGG: Acfer_0035 # Name: not_defined # Def: S-layer domain protein # Organism: A.fermentans # Pathway: not_defined # 190 332 1522 1671 1790 82 40.0 2e-14 MDNLGNKIDKTTEKVEKGLNFAADTGTTNKKLGDTLTIAGDDKNITTSVEEGKVKVALKE DVKVKTLTSETVTTDKLILKGKDGKTTDVGETLDKHDKDIQENKKAIEKGLNFAANHGEV KKQLGDTMSIKGKDGLSEKEIEEKYDVENIVTSVDKEGNLWIKMAKNPKFKSVEAGEGDT KVTIGDIGIKIGDKTYITKDGINANNNKIKNVADGKVAKGSKDAINGGQLHDALSNVQEG MNQINHRVDKLDDRMHRGLANAAAMSTVEFLEIGINQATVGAAIGTYRGNQAVAVGVQAA PTENMRVHAKVSVAPSRNNTETMAGVGASWRFNIK >gi|224531369|gb|GG658183.1| GENE 153 112413 - 112478 84 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMKGGCIDKYYMYLSYKKKIG >gi|224531369|gb|GG658183.1| GENE 154 112487 - 113092 984 201 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257453228|ref|ZP_05618527.1| ## NR: gi|257453228|ref|ZP_05618527.1| hypothetical protein F3_09218 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_07046 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 201 5 205 205 377 100.0 1e-103 MYIGILVLGAAFAACGPSNTKIRPYAEVKEEVPGIQSIVTRADRGSIYIALKNVSEEELE IIWEDSTLGGDQVSHGTYVDINDYRLKQENTKMKKGEIFQTVLRRKNDLYYLDPVLYQPG GVKVKALKYPTDLVLKVKQGEKISTLETHIQQEESLHQKDVDARLQGAKDANFIPEFTDK KIVLREDKKIKKGVVTNGIEE >gi|224531369|gb|GG658183.1| GENE 155 113481 - 114041 580 186 aa, chain - ## HITS:1 COG:FN1763 KEGG:ns NR:ns ## COG: FN1763 COG3758 # Protein_GI_number: 19705082 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 185 1 184 184 191 49.0 6e-49 MYTIIKKNEWQSLEWSGGITNQLYIYPKTGDYTTRNFSARISIAETRDESRSQFTNLPGI DRFISNLEGTMKLEHEDHYDIEVHPYEIERFQGSWVTFSTGKYRDFNLMLQGVMGDLYFK ELTGDITLHLQEALTFAFIYVIEGSIILDKQIKLEASDLLIATDCRLDVKTDSAKVYYGF VKEWDS >gi|224531369|gb|GG658183.1| GENE 156 114229 - 114750 799 173 aa, chain + ## HITS:1 COG:FN0213 KEGG:ns NR:ns ## COG: FN0213 COG1778 # Protein_GI_number: 19703558 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Fusobacterium nucleatum # 2 169 1 168 168 184 52.0 7e-47 MLEKIEMVVFDIDGTLTDGRLIRDNEGNTSKNFYAKDGFAMGQWLRLGKKIGIITGKESR IVADRAKELGIIDVIQGSKNKAKDLEQFLEKYSYTREQIAYMGDDINDLGILSKVGFSSC PKDAAPEVLAMVDFIAAHNGGQGAARDLMEHIMKANGMWKKVLEYYQKEENRS >gi|224531369|gb|GG658183.1| GENE 157 114873 - 116024 1473 383 aa, chain + ## HITS:1 COG:FN0118 KEGG:ns NR:ns ## COG: FN0118 COG0484 # Protein_GI_number: 19703466 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Fusobacterium nucleatum # 1 373 1 378 392 416 64.0 1e-116 MEKRDYYEVLGVTKGSSEGEIKKAYRKAAMKYHPDKYTNASEKEKKEAEDKFKEVNEAYQ VLSDPQKKQQYDQFGHAAFEQGAGGFGGGFGGDFEDLGDIFGDLFGSAFGGGFGGSSRRR SSVQPGDDLRLQVEITLEEANTGVEKTVKYNRKGKCTHCDGTGAEDKKVKQCSKCHGTGR IQVQQRTPFGVFQNVSECPDCHGTGKIPEKKCTHCHGTGAEKEKIEKTVKIPAGIDDGQK LKLTGMGDASTTGGAFGDLYVHVRVKPHPIFERNDIDLYCDVPITFATAVAGGEIEVPTL TGKKKVKIAAGTQTGKMMKLSGEGMKSLRGNYHGDLLIRLNIETPTNLTKHQMELLQKFE ESLEEKNYPKRKSLFDKIKDLFQ >gi|224531369|gb|GG658183.1| GENE 158 116091 - 116351 381 86 aa, chain + ## HITS:1 COG:FN1335 KEGG:ns NR:ns ## COG: FN1335 COG1862 # Protein_GI_number: 19704670 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Fusobacterium nucleatum # 3 85 7 89 94 80 59.0 6e-16 MEKYGNLILIVLVWGAIFYFLVMRPNKKRQKEQKELFDSLHEGVEVVTAGGIKGTILYVG EDFVDVKVDKGVKLTVRKTSISTIVK >gi|224531369|gb|GG658183.1| GENE 159 116410 - 117417 1265 335 aa, chain + ## HITS:1 COG:FN1334 KEGG:ns NR:ns ## COG: FN1334 COG0860 # Protein_GI_number: 19704669 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Fusobacterium nucleatum # 6 335 2 338 338 306 50.0 4e-83 MYKKSLSILFFLFVCFSSFAAEIQKVVDRGEKIEIQLNGSVAGNITEAYDEDSRVLFLEI PKASLNKKIGLADNPYIENFNMEDYGGSVGLTCRLKNKLSYKIEKGSKSVALVFQQGSGK KKLIVIDPGHGGKDPGAARGAYREKDIVLSVGKYLKEELGGEYDIIITRDTDKFITLSER PKMGNRAGAKLFVSLHVNAAVNTAANGVEVYFFSKKSSPYAERIAQYENSFGEKFGEKSS SIAQISGEIAYKHNQTESIPLAENISKKIARSLGMRNGGAHGANFAVLRGFNGPSILVEM GFISNASDVEKLIREENQRQIAQDVAAGIREFFER >gi|224531369|gb|GG658183.1| GENE 160 117435 - 117845 529 136 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467188|ref|ZP_05631499.1| ## NR: gi|257467188|ref|ZP_05631499.1| hypothetical protein FgonA2_07076 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 136 1 136 136 218 100.0 1e-55 MKKLVTLVIWILAILVGGIYMTFPSSNIVKDATKVEKIQEDIDGKDYVLYLPDGSSEEKE LQESENKSEELHRLVQAELDYLYEKEVEGSKIELRNIYVTEDGVYILCTEKPKEQSLQAI AEVLKQLEITAKVQVL >gi|224531369|gb|GG658183.1| GENE 161 117847 - 118419 680 190 aa, chain + ## HITS:1 COG:FN0607 KEGG:ns NR:ns ## COG: FN0607 COG1713 # Protein_GI_number: 19703942 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Fusobacterium nucleatum # 16 179 16 179 193 176 59.0 2e-44 MREEEKDYCVWLSKILSKKRFAHVLSVVKEADYLARKNGADVEKCRLAALLHDCAKEMPL EEMQEICRREKFVDLSEQDLENGEILHGFVASVYVKEKFGIEDKEILEAICYHTVGKVGM SLIGKIVYIADAIEETRNYPNVVAIREKTHENLELGILMEIEHKLEYLSSIGARLHPNTL EWKKSLEEGN >gi|224531369|gb|GG658183.1| GENE 162 118374 - 120353 1247 659 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 1 647 56 697 730 484 41 1e-136 SEYFGVEKEFRGGKLMREEFVRGTFSIIKERFAFVDTEEGEGIFIPKTAFHGALDGDVVL VRITKDKTEEHGREGEVTEIVSREKEKIVGILERRSDFGFVRPTHAFGKDIYIPRGKMKK AQNGELVVVSIYFWGDKDRKPEGEIIEVLGDPYNTKNMVDALIYREGMSEEFPRKVKTEL KNIRTTISEKEVSSRHDLREYSIITIDGEDARDLDDAVYVEKMKNGNYKLLVCIADVSYY IPENSELDLEAQKRGNSVYLVDRVLPMFPKEISNGICSLNENEDKLTFTCEMEIDSTGKV IQAEMYKSVIRSVHRMTYTKVNEMIEGKEQTLQEYQDIQEMVKDMLDLSQILRARKYARG SIDFDLSEIKLVLDEEEKVKYVKLRERGEAEKIIEDFMIAANEAVAEKLFWMEIPSVYRT HEKPERERLQKLNESLKNFHYRVHNLEDVHPKQFQEMIEDSKEKGVNLIVHKMILMALKQ ARYSMENVGHFGLASECYTHFTSPIRRYADLEVHRILDSTLKSYPSGKELSRNVKKLPKI CEHISKTERTAMKVEEESVKIKLVEYMMNQVGEEFSAIVTGFSNHRVFFETEEHIEVSWD VVSSRHFYEFDEREYAMLDREQTEHQYHMGDKVKIVIVKASLQELEIEAVPTIVMQKGW >gi|224531369|gb|GG658183.1| GENE 163 120364 - 120810 540 148 aa, chain + ## HITS:1 COG:FN0609 KEGG:ns NR:ns ## COG: FN0609 COG0691 # Protein_GI_number: 19703944 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Fusobacterium nucleatum # 1 148 1 148 148 215 76.0 2e-56 MILAGNKKAYFDYFVEDKLEAGIELQGSEVKSAKAGKVSIKESFIRIINGELFIMGMSIV PWSFGSIYNPEERRVRRLLLHKKEIRRLHEKVSQKGYTIVPLDVHLSHGYVKLEIALARG KKTYDKRESIAKRDSERDIRRSLKENNR >gi|224531369|gb|GG658183.1| GENE 164 120819 - 124175 3318 1118 aa, chain + ## HITS:1 COG:mlr5451_3 KEGG:ns NR:ns ## COG: mlr5451_3 COG0318 # Protein_GI_number: 13474545 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mesorhizobium loti # 621 1115 2 497 508 460 47.0 1e-129 MLLKERRFLPLFLTQFLGALNDNLLKMAIITFITYHLQGSLTEKGILISSVNVITILPMF FISATAGQFADKFQRNSLVKIIKGIEIFGILLCIFFFYSGQYPLILVTLFVMSMRSAFFG PLKYSILPQHLKEAELISANAFVDTSTYLAVLFGTILGTYLHSPTFVLAFLLSSAVIGFI SSFFIPISPAPRPKAKLHKNILKDIRITYRKVAELKVIYQTILGISWFWSLAAVVMLLIY PLCESVLGTSRNAVAVFMLIFALGISIGAYLCTKILKGVVHPTYVPLSSLGMAISMFALY WATNRYVPPFENLHTVPFFTSFVGIRMAIILFLLAFFSGMYLVPLNTFLQTRAPKKYLAT VIAGNNIVNACGMVFLSIFIMILFHLGISIPQIFFFLSLVSILVAFYILTMLPDALPRSI AQSLLAIFFKVEVKGLEHFEKAGKRVLVIANHTSLLDGLLVAAFMPERLIFAINTHIAKK WWVKIFKPVVTLHPLDPTNPVALKNIIDELKKNQKCIIFPEGRITVTGSLMKVYEGAGVV ANAADANILPVRIDGAQFSKFSYLKTKFKTTYFPKITITVLPHTKITLEEGTSPAVRRKQ IGDQLYTIMTNMMYQSSPISTPLFRALLTARKIHGKGHVVAEDIGRRPITYQQLILKSYV LGKFFQDSIEEKHVALMLPNSLANVVAYFGLQSVGKIPAMVNFTQGEAQILSCLDTANVK TLITAKKMVDLMELQPLIESLEHIGIRVLYLEEVQEELSYTQKLVGMYRYYRRYSPKVDS SDIATILFTSGSEGMPKAVALNHENLQANRYQISSVFAFNEKDVFFNMLPMFHSFGLEVG TILPLLSGIKVFFYPSPVHYKIVPELVYDSNATILCGTDTFFQGYAKQANPYDFYNIKYA IVGAEKLKDSTSQIWMEKFGVRILEGYGITETSPVLAVNTPMYQKKNSVGKWMPGIEYRL EEIEGVEEGGRLFVKGKNIMRGYLKNGELETLPDGWYDTGDIVSVDEEGFVHILGRAKRF AKIGGEMVSLSAVEEVLQEKYPDIKLAVISIQDEKKGEQLVLFTEAENMDSKELLDYFKT KHYSELWIPKKILTKQEIPILGTGKTNYVKLREMLDTK >gi|224531369|gb|GG658183.1| GENE 165 124303 - 125046 1098 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237743354|ref|ZP_04573835.1| SSU ribosomal protein S2P [Fusobacterium sp. 7_1] # 1 247 1 247 247 427 86 1e-118 MAVITMKQLLEAGVHFGHQAKRWNPKMAKYIFTERNGIHVIDLHKSLKKIETAYDEMRKI VEDGGKVLFVGTKKQAQEAIKEQAERSGMYYVNSRWLGGMLTNFSTIKGRIERLKELERM EAEGILDTAYTKKEAATFRKELAKLSKNLTGIKEMKEVPQAIFVVDVKMEELAVTEADHL GIPVFAMIDTNVDPDKVTFPIPANDDAIRSVKLITSVMANAIVEGNQGKETVEPASEEIQ VEEGSAE >gi|224531369|gb|GG658183.1| GENE 166 125079 - 125972 537 297 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 292 1 276 283 211 45 2e-53 MAAITAGLVKELRERTGAGMLDCKKALEQHDGDIEKAIDYLREKGIAKAVKKAGRIAAEG LIFDGVTADHKKAVVLEFNSETDFVAKNEEFKNFGKALVQIALDKNINTIEELKATEFEA GKTVEAVLTELIAKIGENMNLRRIHETVAKDGFVETYSHLGGKLGVIVEMSGEATEGNLH KAKDIAMHAAAMDPKYLCQEEVTTADLEHEKEIARKQLEEEGKPAQIIEKILIGKMNKFY EENCLVNQIFVKAENKETVGQYAGDLKVLSFTRYKVGDGIEKKEEDFAAEVAAQIKG >gi|224531369|gb|GG658183.1| GENE 167 126045 - 126764 1074 239 aa, chain + ## HITS:1 COG:FN1622 KEGG:ns NR:ns ## COG: FN1622 COG0528 # Protein_GI_number: 19704943 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Fusobacterium nucleatum # 1 239 1 239 239 399 87.0 1e-111 MEKPCYQKVLLKLSGEALMGEQEFGISSDVINSYAMQIKEIVDLGVQVSIVIGGGNIFRG LSGAEQGVDRVTGDHMGMLATVINSLALQNAMEKIGLATRVQTAIEMPKVAEPFIKRKAQ RHLEKGRVVIFGAGTGNPYFTTDTAAALRAIEMNTDVVIKATKVDGVYDKDPVKYADAVK YETVTYTEVLNKDLKVMDATAISLCRENKLPIVVFNSLVPGNLKKVILGEKIGTTVVAE >gi|224531369|gb|GG658183.1| GENE 168 126782 - 127351 903 189 aa, chain + ## HITS:1 COG:FN1623 KEGG:ns NR:ns ## COG: FN1623 COG0233 # Protein_GI_number: 19704944 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Fusobacterium nucleatum # 6 189 7 190 190 239 77.0 2e-63 MTTGKEVIQECQNKMQKTIEATKEKFTSIRAGRASVAMLDNIKVEQYGSDMPLNQVATVS APEARLLVIDPWDKTMILKIEKAILAANLGMNPNNDGRVVRLVMPELTADRRKEYVKLAK KEAENGKIAVRNIRKDMNTALKKIEKDKESGMSEDELKRFEAEVQTLTDKTIKDLDDLLA KKEKEITTV >gi|224531369|gb|GG658183.1| GENE 169 127393 - 127821 460 142 aa, chain - ## HITS:1 COG:FN0029 KEGG:ns NR:ns ## COG: FN0029 COG0716 # Protein_GI_number: 19703381 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 137 1 138 143 152 53.0 1e-37 MNTIGIVYYSFTGNVLRMVKELEKGIEEVGGKFKSYRVAEVKADEIFQQDIIVMASPANG SEEIEKEFFQPFMENHQKQFQGKKVYIFGSWGWGEGYFLEKWKEQLEEFGAILVAEPILC NGYPNGETRKALQEMGKILVEK >gi|224531369|gb|GG658183.1| GENE 170 127957 - 128649 729 230 aa, chain + ## HITS:1 COG:FN1326 KEGG:ns NR:ns ## COG: FN1326 COG0020 # Protein_GI_number: 19704661 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Fusobacterium nucleatum # 1 227 1 227 230 311 67.0 6e-85 MSIEVPKHIAIIMDGNGRWAKKRALPRTLGHREGAKTLQKILKYAGELGIQYLTVYAFST ENWNRSEEEVSALMKLFSKYIKNEEKNLMKNNVRFLVSGRKERVSSSLLEEIKALEEKTS RNTGITFNIAFNYGGRAEIVDAVNQLLQEKKEKISEEDISSHLYQNIPDPELIIRTSGEF RISNFLLWQLAYAEIYVTDTLWPDFDEKSLDLALENFQKRERRFGGVYEK >gi|224531369|gb|GG658183.1| GENE 171 128639 - 129463 934 274 aa, chain + ## HITS:1 COG:FN1325 KEGG:ns NR:ns ## COG: FN1325 COG0575 # Protein_GI_number: 19704660 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Fusobacterium nucleatum # 3 270 5 281 294 199 43.0 5e-51 MKSRIIVALIGIPILIFVILFGGIPLLIFTNFVVGIGTWEFYRMIEHSGRRVHKYVGMLA SLALPNYIFWTQGQKVEGEIAILVFAMVLMFLERVFTNRIEHASTEIGNTVLGLIYVSYF FSHILKWSFWDNGGQLILLLQIMVWSCDSFAYFIGISIGRKIFKRGFTEISPKKSIEGSL GGILCTILAAYLLLKYFTLFLAQTQEELLIFSLILGVGVSLAAQIGDLVESLFKRECGIK DSGKILAGHGGILDRFDSMIFVLPIMYYIMGAVL >gi|224531369|gb|GG658183.1| GENE 172 129460 - 130614 1284 384 aa, chain + ## HITS:1 COG:FN1324 KEGG:ns NR:ns ## COG: FN1324 COG0743 # Protein_GI_number: 19704659 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Fusobacterium nucleatum # 1 382 4 390 390 430 58.0 1e-120 MKRIVVLGSTGSIGKSSLEVVRGNADLFQIVGLSGHRNMELLKQQIKEFHPKYVTVGYWE AYQELKTIFPEIQFFYGEQGLEELASVEDYDILLTAVSGAVGIRATVKGIEKEKRIALAN KETMVAAGSYINDLLKRYPKTEIIPVDSEHSAIFQSLQGNDKKEVKRLIITASGGAFRGK TRIELEKVGVQDALKHPNWSMGKKITVDSATLVNKGLEIIEAHELFGIDYDKIDTILHPQ SIIHSMVEYQDNSIIAQMGVTDMKLPIQYAFTYPRRVSNSVLESLDFLKYGQMSFEKIDT QVFQGIDLARKAGNMGGTMPIVLNAANEIAVDFFLKEKIRFLEIYEVIQAAMEQFPREEI QSLEHILAKDHEVREWVKTWEKLL >gi|224531369|gb|GG658183.1| GENE 173 130596 - 131264 913 222 aa, chain + ## HITS:1 COG:FN1323 KEGG:ns NR:ns ## COG: FN1323 COG0125 # Protein_GI_number: 19704658 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Fusobacterium nucleatum # 1 222 1 222 225 260 60.0 1e-69 MGKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYLAGEFGLN AEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKEKEE YLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKRANKITGEEEKDIHERNREYLEK SYRNACEMAEKYGWTRISCVDGDRIKSIQEIQNEILEKVREI >gi|224531369|gb|GG658183.1| GENE 174 131261 - 132262 1028 333 aa, chain + ## HITS:1 COG:FN1322 KEGG:ns NR:ns ## COG: FN1322 COG0750 # Protein_GI_number: 19704657 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Fusobacterium nucleatum # 1 333 1 338 339 323 54.0 2e-88 MTVLIAIVVLGIIILVHELGHFATAKLFHMPVSEFSIGMGPQVYSYETSKTMYSFRAIPL GGYVNIEGMEIDSEVEGGFASKPAYQRLIVLVAGVCMNFLFAMTLLTALYFHLGNAEYSK EPIVGAVIEESPAVQYLQAEDRIVQIEGVSILTWEDIGKNIQNKEKIEVLVERGEEEKSF QIPLIQKENRSFLGVYPKIIKSSYSFGQSFLKANSSFINIISDMGKGLWKMVRGEISVKE ISGPIGILQVVGEASKQGIVSVLWLSVFLSINVGLLNLLPLPALDGGRILFVLLEILHIP FSKKIEENIHKIGLFLFLTLIFFISIQDVLHLF >gi|224531369|gb|GG658183.1| GENE 175 132360 - 133745 1716 461 aa, chain + ## HITS:1 COG:FN1321 KEGG:ns NR:ns ## COG: FN1321 COG2204 # Protein_GI_number: 19704656 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Fusobacterium nucleatum # 1 461 9 469 469 612 72.0 1e-175 MKNAILAISEKKDTLKQIRKELSEKYEVITFNNLLDAIDMLRESDFDLVLLDEYLTWFSL SDAKKKLSSIGKDFATIALFDDITPDKLKEIKQAGIYSYLPKPVLVSDIDKVILPVLHNL ELVKENKKMTEKLTELEHETEIIGQSPKIKEVKNLIDRVADSDMPVLISGEKGVGKLVIA REIYKKSDRKKQDYIQVSCATIPEENLEKELFGYERGTFIGANTSKKGLLEEIDGGTIYI EDIALMDLKVQSKLLKVIEYGELRRVGGTKVRRVNVRFIIGSDIDLKEETEQGRFRKDLY HRLTAFLIVVPPLRERKEDVPLLVSYYLNRIVKELHRETPVISGEAMKYLMEYSYPRNIR ELKNMVERMALVSNEKILDVEDLPLEIKMKSATLENKTVVGVGPLKDILEQEIYSLDGVE KVVIASALQKTRWNKQETSKLLGIGRTTLYEKIRKYGLDIK >gi|224531369|gb|GG658183.1| GENE 176 133761 - 135410 2212 549 aa, chain + ## HITS:1 COG:FN1320 KEGG:ns NR:ns ## COG: FN1320 COG0760 # Protein_GI_number: 19704655 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Fusobacterium nucleatum # 186 547 1 355 356 142 30.0 2e-33 MAIRKFRKIMKPVIFIVAIAMIGSGAWLTFTNLLQHHSAGETQYAYQLNGEKVSKVKIAR EENNLMEQLNKMGQGKTSKELVSLIAFQKVINDELTLQLAEDMKIKVPSSEIKEEYEKIE NSIGNKEQFKRMLSVQGYSKKSFKAMLEENLLLQKVMEKFAEEAKKSGKDGNLLFQEALA KKRNEMKIDKLSPEYEKLQLKVVEEKDGFKITNVDMADRVTQLMLMTGEEEAKVTEEVKK QFEEGIAFAKKAQEKGVLISKDLPINVQLAEYGKAFFEKLKSEVKIDEVELSRFFQANHN RYNQHASIDVDVAVLKIVPSKEDIAAIEKKAEETLKSLKKENFAKIGADLQKKSPETVIY EELGWFEKGAMVKEFEEAAFSSKEAQIYPKVISTQFGKHLLYIQEVQENKVKAAHILFRE VASQASIDKSLKEAESIKEKLDKKEVTFETLKNINKNLLFAHTFTGVDKSGVIQGFVTDK ALVDTMYAAEMNKVQIYSDDYAKKAGIIYLFSKTKQEEDKIVSLEEVQDRVRDEYRSWRA QQELQKIMN >gi|224531369|gb|GG658183.1| GENE 177 135531 - 137357 1918 608 aa, chain + ## HITS:1 COG:FN1319 KEGG:ns NR:ns ## COG: FN1319 COG0358 # Protein_GI_number: 19704654 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Fusobacterium nucleatum # 2 601 3 599 603 482 46.0 1e-136 MFRQEDIDRLMEQLNIVDVVGEFVELKKSGANYKGLCPFHADNNPSFSVNPQKNICKCFV CGAGGNPITFYSKYKKISFQEAVRELAKKYHIPLQEIKQNKEENEKFERYYKIMEEAHQY FSHLIFENIGREALEYLVKRKVGPKLIRENNLGYASPSWDSLFNHLIELGYQSEELELLG LVKRRENGQYYDVFRNRVIFPIYSIQGRVIAFGGRTLEQDKEIPKYINSSDTPIFKKGKG LYGLERVSGIKQKNYAMIMEGYMDVLSTVSYGFDTSIAPLGTALTKEQVQLLKRYTENVI LCFDSDNAGQMAAERAIFLLKEEGFNIRVLQLKGAKDPDEFLKKFGKEAFLQEVQACLEA FDFLYTYYKKEYALDDIMSKQKFVERFQEFFHSLSKELEQELYLHKFSDLLGMDVQVLRP LLFPKGTRNFSHVRARKQEEEIFVQDFQELYSVLEKLSVQISILDLQQHKESEEAKYYHF LKDMPFQFDFTRKIFQDLEKYEQGKDTQSRNTILESIREIFTKDNYTIEEKEHLFELLSE CLERDKIEEQKHIVCRDWAREMFKNTVVTDPFKQLRLKQLEQKILKNKKDMGQFLEMYQR YLKLREEK >gi|224531369|gb|GG658183.1| GENE 178 137367 - 137594 313 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257453204|ref|ZP_05618503.1| ## NR: gi|257453204|ref|ZP_05618503.1| RNA polymerase sigma factor rpoD [Fusobacterium sp. 3_1_5R] RNA polymerase sigma factor rpoD [Fusobacterium sp. 3_1_5R] RNA polymerase sigma factor rpoD [Fusobacterium sp. 3_1_5R] # 1 55 1 55 436 79 100.0 6e-14 MREFIKNEKVLSLIRKAMKEKVITYEEINDELKEDFPLEQIDKLISGMIEQGIEIKKKAS LEKEKKRKQRKKLQK >gi|224531369|gb|GG658183.1| GENE 179 137618 - 138676 1483 352 aa, chain + ## HITS:1 COG:FN1318 KEGG:ns NR:ns ## COG: FN1318 COG0568 # Protein_GI_number: 19704653 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Fusobacterium nucleatum # 32 352 23 331 331 421 80.0 1e-117 MTKKRKKKEEEVEEVSKMKEEEEEFQDTDLSFEEIPEEENLEDLLEKEEDFDASELEEIP EEELTNEELAELSNGMKVDEPIKMYLREIGQIPLLTHKEELELAKKALEGDEFANKRLIE ANLRLVVSIAKKHTNRGLKLLDLIQEGNIGLMKAVEKFEYTKGYKFSTYATWWIRQAITR AIADQGRTIRIPVHMIETINKIKKEARIYLQETGKDATPEILAERLGMEVEKVKSIQEMN QDPISLETPVGSEEDSELGDFVEDQKMLTPYELTNRSLLREQLDSVLGSLSSREEKVLRY RYGLDDGSPKTLEEVGKIFKVTRERIRQIEVKALRKLRHPSRRKKLEDFKVE >gi|224531369|gb|GG658183.1| GENE 180 138718 - 139593 1165 291 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467208|ref|ZP_05631519.1| ## NR: gi|257467208|ref|ZP_05631519.1| hypothetical protein FgonA2_07176 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 291 1 291 291 423 100.0 1e-117 MKQKEFEELLLNKRFSDDEFFEYLQKNTLKDIEFEVMDEQVAIEKKDFTLLESSVLEYIE ELCSYDPDHLSEEREAHIALEVKKVLYYAFFYFKEGISYMDLVQEGIVGLMKGVDRQSER LDFWIIREIFLFVYSEIQDLKFGFKNFLKGKREEAEHHHEHEHHHDHEEDHECSCGHDPN EEHECCGKHHHKEEEEEILDKNQILEKLLKSNAAIDEMEQIIEESLDFHHIKNRLYAIEI EVLNYYFGLLVEKRYSIFEIEEKFQLQKNHAQNIFENAMYKLSTLKGKLEL >gi|224531369|gb|GG658183.1| GENE 181 139590 - 140366 860 258 aa, chain + ## HITS:1 COG:FN1316 KEGG:ns NR:ns ## COG: FN1316 COG0327 # Protein_GI_number: 19704651 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 256 1 257 258 250 54.0 2e-66 MKTKDFINILEKKYPKNLAEDWDNVGLLVGDEEKDLQKILFSLDVTEEVIDYAIKNSFDM IISHHPIIFRGIKRVLKQDALGTKIFKLVKYGINVYTLHTNLDAQIEGLNDYLLEKIGIS NSSILEKREDGTGIGRIFKYPEGKLISEIQEELSNYLKLSFQRYIGKNRNKKVYRACLVN GSGMSYWRMAQSRGVELFITGDVSYHDALDAKESGMDIIDIGHYEAERFFAELLMKNLQE TSLNFEIFDSKPVFQLIK >gi|224531369|gb|GG658183.1| GENE 182 140377 - 140949 814 190 aa, chain + ## HITS:1 COG:no KEGG:FN1315 NR:ns ## KEGG: FN1315 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 14 186 4 175 177 102 38.0 8e-21 MRKYLLSLCMLCFSCIAWAEVNDTLNLIPKKEIPKIEEKIHEIYNKKKVKVYVNTLTEGE GFQVADPERTVILNISRDKTTQVKVTLRFSKDIDIEEEQSKMDLSLDNASSILIGGKPGE YILQVLDGVEYLLENVEISEPQILMQKAEEKAEFQKGIFISLGVILLLLLKIGYDFLKKK KAKQEKIITK Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:10:07 2011 Seq name: gi|224531368|gb|GG658184.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.6, whole genome shotgun sequence Length of sequence - 131763 bp Number of predicted genes - 129, with homology - 125 Number of transcription units - 47, operones - 24 average op.length - 4.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 3 - 62 5.8 1 1 Op 1 35/0.000 + CDS 90 - 1829 184 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 2 1 Op 2 . + CDS 1822 - 3531 190 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 3 2 Op 1 34/0.000 + CDS 3982 - 5346 240 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 4 2 Op 2 . + CDS 5351 - 6052 317 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 5 2 Op 3 . + CDS 6063 - 6647 644 ## HMPREF0868_0145 hypothetical protein + Term 6819 - 6863 -0.4 + Prom 6779 - 6838 3.7 6 2 Op 4 . + CDS 6899 - 7315 355 ## CD0435 putative sigma factor + Term 7324 - 7387 16.5 7 3 Tu 1 . - CDS 7653 - 7727 158 ## - Prom 7776 - 7835 5.5 8 4 Op 1 . + CDS 7767 - 7922 208 ## 9 4 Op 2 2/0.000 + CDS 8021 - 9685 1128 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 10 4 Op 3 2/0.000 + CDS 9685 - 11352 1124 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 11 4 Op 4 . + CDS 11345 - 12838 751 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 12 4 Op 5 27/0.000 + CDS 12829 - 13797 714 ## COG0286 Type I restriction-modification system methyltransferase subunit + Prom 13811 - 13870 5.6 13 4 Op 6 4/0.000 + CDS 13981 - 15249 829 ## COG0732 Restriction endonuclease S subunits 14 4 Op 7 11/0.000 + CDS 15185 - 15910 712 ## COG0732 Restriction endonuclease S subunits 15 4 Op 8 . + CDS 15922 - 18942 2974 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases + Prom 18951 - 19010 9.1 16 5 Op 1 . + CDS 19087 - 19887 941 ## COG0561 Predicted hydrolases of the HAD superfamily 17 5 Op 2 1/0.000 + CDS 19944 - 20969 1413 ## COG0687 Spermidine/putrescine-binding periplasmic protein 18 5 Op 3 . + CDS 20979 - 22076 1275 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 19 5 Op 4 . + CDS 22078 - 22851 880 ## COG0566 rRNA methylases 20 5 Op 5 . + CDS 22892 - 23392 758 ## COG2190 Phosphotransferase system IIA components 21 5 Op 6 . + CDS 23392 - 23838 610 ## gi|257467230|ref|ZP_05631541.1| hypothetical protein FgonA2_07286 22 5 Op 7 . + CDS 23854 - 24549 806 ## COG2964 Uncharacterized protein conserved in bacteria + Prom 24685 - 24744 16.6 23 6 Op 1 . + CDS 24780 - 26105 1637 ## COG0733 Na+-dependent transporters of the SNF family + Prom 26114 - 26173 5.6 24 6 Op 2 1/0.000 + CDS 26211 - 27014 1025 ## COG0607 Rhodanese-related sulfurtransferase 25 6 Op 3 . + CDS 27027 - 27803 957 ## COG0561 Predicted hydrolases of the HAD superfamily 26 6 Op 4 1/0.000 + CDS 27870 - 29378 2149 ## COG0747 ABC-type dipeptide transport system, periplasmic component 27 6 Op 5 . + CDS 29393 - 30466 1352 ## COG1363 Cellulase M and related proteins + Term 30487 - 30527 5.1 - Term 30567 - 30601 2.1 28 7 Tu 1 . - CDS 30617 - 30898 496 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 30974 - 31033 9.4 29 8 Op 1 . + CDS 31237 - 31350 64 ## 30 8 Op 2 1/0.000 + CDS 31405 - 35082 4418 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 31 8 Op 3 4/0.000 + CDS 35095 - 35571 725 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 32 8 Op 4 2/0.000 + CDS 35601 - 36317 1040 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 33 8 Op 5 13/0.000 + CDS 36346 - 37695 1724 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 34 8 Op 6 21/0.000 + CDS 37707 - 38723 838 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase 35 8 Op 7 10/0.000 + CDS 38711 - 39271 834 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 36 8 Op 8 17/0.000 + CDS 39273 - 40775 1845 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 37 8 Op 9 . + CDS 40792 - 42018 1698 ## COG0151 Phosphoribosylamine-glycine ligase + Term 42021 - 42069 11.0 - Term 42015 - 42051 4.1 38 9 Op 1 1/0.000 - CDS 42064 - 42666 768 ## COG0491 Zn-dependent hydrolases, including glyoxylases 39 9 Op 2 . - CDS 42678 - 43463 1085 ## COG0796 Glutamate racemase - Prom 43489 - 43548 8.6 + Prom 43448 - 43507 6.2 40 10 Tu 1 . + CDS 43600 - 45294 2381 ## COG0405 Gamma-glutamyltransferase + Term 45308 - 45356 6.5 + Prom 46227 - 46286 80.4 41 11 Op 1 . + CDS 46357 - 46974 732 ## COG1279 Lysine efflux permease 42 11 Op 2 . + CDS 46974 - 47114 86 ## gi|257451944|ref|ZP_05617243.1| hypothetical protein F3_02686 43 11 Op 3 . + CDS 47068 - 47337 95 ## gi|317058494|ref|ZP_07922979.1| predicted protein 44 11 Op 4 . + CDS 47274 - 47810 588 ## COG3663 G:T/U mismatch-specific DNA glycosylase + Prom 47820 - 47879 6.7 45 12 Tu 1 . + CDS 47959 - 48273 254 ## COG3177 Uncharacterized conserved protein + Term 48297 - 48330 2.4 + Prom 48341 - 48400 12.1 46 13 Op 1 . + CDS 48524 - 48751 355 ## gi|257451941|ref|ZP_05617240.1| hypothetical protein F3_02671 47 13 Op 2 . + CDS 48732 - 49700 843 ## DSY5047 hypothetical protein 48 13 Op 3 . + CDS 49718 - 50350 556 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 49 13 Op 4 . + CDS 50381 - 51205 904 ## COG3177 Uncharacterized conserved protein 50 13 Op 5 . + CDS 51202 - 51492 438 ## gi|257451937|ref|ZP_05617236.1| hypothetical protein F3_02651 51 14 Tu 1 . - CDS 51578 - 51856 387 ## gi|257467259|ref|ZP_05631570.1| hypothetical protein FgonA2_07431 - Prom 51885 - 51944 9.3 - Term 52090 - 52134 -0.9 52 15 Tu 1 . - CDS 52312 - 52938 798 ## gi|315918389|ref|ZP_07914629.1| predicted protein - Prom 52969 - 53028 9.9 - Term 53351 - 53387 7.5 53 16 Tu 1 . - CDS 53432 - 53608 374 ## gi|257467261|ref|ZP_05631572.1| hypothetical protein FgonA2_07441 - Prom 53699 - 53758 11.9 + Prom 53625 - 53684 9.0 54 17 Tu 1 . + CDS 53795 - 55597 2853 ## COG0481 Membrane GTPase LepA + Term 55615 - 55650 1.1 + Prom 55723 - 55782 13.1 55 18 Op 1 . + CDS 55868 - 56410 587 ## FN1814 hypothetical protein 56 18 Op 2 25/0.000 + CDS 56422 - 57333 1374 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 57 18 Op 3 42/0.000 + CDS 57334 - 58050 224 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 58 18 Op 4 12/0.000 + CDS 58065 - 58964 1011 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 59 18 Op 5 . + CDS 58961 - 59836 1097 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 60 18 Op 6 . + CDS 59865 - 60284 802 ## FN1808 hypothetical protein 61 18 Op 7 . + CDS 60317 - 61114 1336 ## COG5266 ABC-type Co2+ transport system, periplasmic component + Term 61130 - 61173 6.3 - Term 60966 - 61006 -0.2 62 19 Op 1 . - CDS 61162 - 62085 956 ## gi|315918399|ref|ZP_07914639.1| predicted protein 63 19 Op 2 . - CDS 62095 - 62640 779 ## FN0212 hypothetical protein - Prom 62698 - 62757 17.2 + Prom 62667 - 62726 12.2 64 20 Tu 1 . + CDS 62795 - 63796 1076 ## COG0582 Integrase 65 21 Op 1 . - CDS 63762 - 64022 265 ## gi|257467273|ref|ZP_05631584.1| hypothetical protein FgonA2_07501 66 21 Op 2 . - CDS 64108 - 64821 734 ## COG2045 Phosphosulfolactate phosphohydrolase and related enzymes 67 21 Op 3 16/0.000 - CDS 64835 - 65551 1141 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 68 21 Op 4 34/0.000 - CDS 65573 - 66301 590 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 69 21 Op 5 . - CDS 66294 - 66968 989 ## COG0765 ABC-type amino acid transport system, permease component - Prom 66994 - 67053 12.6 - Term 67121 - 67164 -0.5 70 21 Op 6 . - CDS 67258 - 68241 1627 ## COG2502 Asparagine synthetase A - Prom 68348 - 68407 80.4 + Prom 69420 - 69479 80.4 71 22 Op 1 . + CDS 69570 - 71114 1924 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 71141 - 71183 -0.9 + Prom 71213 - 71272 5.6 72 22 Op 2 1/0.000 + CDS 71296 - 71829 798 ## COG2849 Uncharacterized protein conserved in bacteria + Term 71858 - 71901 6.2 73 22 Op 3 13/0.000 + CDS 71926 - 73362 1676 ## COG1538 Outer membrane protein 74 22 Op 4 27/0.000 + CDS 73355 - 74455 1335 ## COG0845 Membrane-fusion protein 75 22 Op 5 . + CDS 74468 - 77533 3468 ## COG0841 Cation/multidrug efflux pump 76 22 Op 6 . + CDS 77544 - 78731 1341 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 77 22 Op 7 1/0.000 + CDS 78738 - 79595 915 ## COG0130 Pseudouridine synthase 78 22 Op 8 . + CDS 79613 - 81424 2405 ## COG1217 Predicted membrane GTPase involved in stress response 79 22 Op 9 . + CDS 81417 - 82172 692 ## Ilyop_0446 ankyrin + Term 82179 - 82217 5.5 - Term 82161 - 82211 9.4 80 23 Tu 1 . - CDS 82214 - 83200 771 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 81 24 Tu 1 . + CDS 83299 - 84033 972 ## COG1242 Predicted Fe-S oxidoreductase + Prom 84057 - 84116 4.4 82 25 Op 1 . + CDS 84208 - 85059 1070 ## COG1737 Transcriptional regulators 83 25 Op 2 . + CDS 85069 - 85896 1153 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Term 86346 - 86415 1.1 84 26 Tu 1 . - CDS 86547 - 86777 283 ## Bacsa_0384 GCN5-related N-acetyltransferase - Prom 86803 - 86862 9.4 + Prom 86777 - 86836 8.1 85 27 Tu 1 . + CDS 86920 - 87282 438 ## COG0239 Integral membrane protein possibly involved in chromosome condensation + Term 87348 - 87387 -0.3 + Prom 87679 - 87738 7.0 86 28 Tu 1 . + CDS 87766 - 88293 743 ## COG0778 Nitroreductase + Term 88310 - 88349 5.4 + Prom 88322 - 88381 6.0 87 29 Tu 1 . + CDS 88454 - 89242 675 ## FN1045 hypothetical protein + Prom 89307 - 89366 5.5 88 30 Tu 1 . + CDS 89406 - 89720 319 ## FN1044 hypothetical protein + Term 89725 - 89766 5.0 - Term 89717 - 89748 2.5 89 31 Op 1 . - CDS 89758 - 90705 1394 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 90 31 Op 2 . - CDS 90721 - 91650 891 ## HMPREF0659_A6323 transporter, auxin efflux carrier (AEC) family protein - Prom 91682 - 91741 7.3 + Prom 91786 - 91845 7.2 91 32 Tu 1 . + CDS 91870 - 94347 2313 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Term 94117 - 94145 -0.0 92 33 Tu 1 . - CDS 94325 - 94702 540 ## Ilyop_2182 GrdX protein - Prom 94732 - 94791 6.6 - Term 94786 - 94829 3.1 93 34 Op 1 . - CDS 94845 - 95258 624 ## FN0351 hypothetical protein 94 34 Op 2 . - CDS 95264 - 95692 512 ## gi|257451896|ref|ZP_05617195.1| hypothetical protein F3_02446 95 34 Op 3 . - CDS 95708 - 96367 509 ## gi|257451895|ref|ZP_05617194.1| hypothetical protein F3_02441 96 34 Op 4 . - CDS 96393 - 97085 342 ## gi|257467305|ref|ZP_05631616.1| hypothetical protein FgonA2_07661 - Prom 97195 - 97254 6.8 + Prom 97041 - 97100 7.3 97 35 Tu 1 . + CDS 97221 - 98480 1528 ## COG3328 Transposase and inactivated derivatives 98 36 Tu 1 . - CDS 99089 - 99175 72 ## + Prom 99296 - 99355 10.2 99 37 Op 1 . + CDS 99537 - 99866 132 ## Fisuc_2040 ATPase (AAA+ superfamily)-like protein 100 37 Op 2 . + CDS 99904 - 100659 332 ## gi|257451884|ref|ZP_05617183.1| hypothetical protein F3_02386 101 37 Op 3 . + CDS 100662 - 101549 526 ## FN1938 hypothetical protein 102 37 Op 4 . + CDS 101594 - 102469 756 ## FN0721 hypothetical protein + Prom 102514 - 102573 4.9 103 38 Tu 1 . + CDS 102603 - 103145 344 ## gi|257451881|ref|ZP_05617180.1| hypothetical protein F3_02371 + Term 103178 - 103228 4.5 - Term 103160 - 103222 8.0 104 39 Op 1 5/0.000 - CDS 103255 - 103926 1163 ## COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport 105 39 Op 2 . - CDS 103971 - 105278 1596 ## COG0672 High-affinity Fe2+/Pb2+ permease - Prom 105326 - 105385 14.2 + Prom 105369 - 105428 13.0 106 40 Tu 1 . + CDS 105480 - 106910 1161 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 106955 - 107002 7.5 - Term 106939 - 106994 11.8 107 41 Op 1 . - CDS 107000 - 107515 551 ## BP951000_1074 hypothetical protein 108 41 Op 2 . - CDS 107519 - 108127 367 ## Apar_1241 hypothetical protein 109 41 Op 3 36/0.000 - CDS 108160 - 108843 261 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 110 41 Op 4 . - CDS 108852 - 110057 959 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 111 41 Op 5 . - CDS 110061 - 110501 506 ## FN1350 integral membrane protein 112 41 Op 6 1/0.000 - CDS 110574 - 110996 559 ## COG4939 Major membrane immunogen, membrane-anchored lipoprotein 113 41 Op 7 36/0.000 - CDS 111014 - 111688 288 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 114 41 Op 8 10/0.000 - CDS 111692 - 112894 1315 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 115 41 Op 9 4/0.000 - CDS 112904 - 114136 1575 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 116 41 Op 10 . - CDS 114186 - 115451 910 ## COG4393 Predicted membrane protein - Prom 115483 - 115542 11.1 117 42 Op 1 24/0.000 + CDS 115799 - 116872 1312 ## COG0505 Carbamoylphosphate synthase small subunit 118 42 Op 2 . + CDS 116862 - 120068 4145 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) + Term 120078 - 120121 7.2 - Term 120062 - 120113 15.3 119 43 Tu 1 . - CDS 120141 - 121364 1185 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 121409 - 121468 15.7 + Prom 121353 - 121412 13.6 120 44 Op 1 . + CDS 121464 - 121757 393 ## COG4939 Major membrane immunogen, membrane-anchored lipoprotein 121 44 Op 2 . + CDS 121813 - 122187 582 ## Ilyop_2182 GrdX protein - Term 121908 - 121963 13.4 122 45 Op 1 . - CDS 122168 - 123436 1223 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 123462 - 123521 2.5 123 45 Op 2 . - CDS 123523 - 124128 706 ## CD1862 putative conjugative transposon DNA recombination protein 124 45 Op 3 . - CDS 124177 - 124389 142 ## CD1862 putative conjugative transposon DNA recombination protein - Term 124405 - 124450 9.0 125 46 Op 1 . - CDS 124475 - 125902 1004 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 126 46 Op 2 . - CDS 125922 - 126101 196 ## SZO_12650 regulatory protein - Prom 126211 - 126270 80.4 127 47 Op 1 . - CDS 127168 - 128559 1286 ## COG0534 Na+-driven multidrug efflux pump 128 47 Op 2 . - CDS 128528 - 131008 2455 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 129 47 Op 3 . - CDS 131033 - 131629 582 ## TDE0348 TetR family transcriptional regulator - Prom 131681 - 131740 10.2 Predicted protein(s) >gi|224531368|gb|GG658184.1| GENE 1 90 - 1829 184 579 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 346 549 40 249 329 75 26 1e-12 MPEKELRKKVIGKNGLSNSLLALKIVFDLIPQILLVYLISSLITNNINEGNLKYIFLGIF ISFVLKGVFYYFATKVAHEKAYEKLTELRLDIIGHLKKLSLGFFKEHNTGELTNIVQHDV EQVEVYLAHGLPEIMSVTLLPTIIFVAMIFVDWRLALGMIAGVPLMYLVKVLSQKTMDKN FAIYFNHENRMREELMEYVKNISVIKAFAKEEEISERTLKTAREYIYWVKKSMGMVTIPM GLIDIFMEIGVVIVMILGSIFLYHGNITTPNFILAIILSSAFTASISKTATLQHFSIVFK EALKAIGKVLTVPLPKKKTEQGLEFGNIEFKDVNFAYGKDSFELKNINLTFKKNSLNAFV GASGCGKSTVSNLLMGFWDADEGQILINGKDIKEYSQENISMLIGSVQQEVILFDLSIFE NIAIGKINATKEEVIEAAKKARCHDFISALPNGYETRVGEMGVKLSGGEKQRISIARMIL KNAPILILDEAMAAVDSENERLIGEAIDDLSKDKTIITIAHHLNTIRDSDQIIVMDKGVV LDAGSHEELMKRCDFYKDMVEAQNKVDRWNLKEVVTENV >gi|224531368|gb|GG658184.1| GENE 2 1822 - 3531 190 569 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 347 554 38 251 329 77 29 2e-13 MFREMLKLLTKTGKRDLIISSVFFALYGLSSIAMIVIVFSILFQIFDGTSLASLYKYFIA IGLLVVFKGICNMVADMKKHSAGFDIVQQIRERMIIKLKKFSLGFYTNERLGEINTILHK DVDNMSLVVGHMWSRMFGDFLIGAVVFIGLASIDLKLAILMAVSVPIALIFLYLTIKQSE KIENQNNSALLDMVSLFVEYVRGIPVLKSFSNNKSLDNELMNKTKKFGETSKAASRFKAK QLSIFGFLLDIGYLVLLISGAILVIKGNLDVLHFIIFAVISKEFYKPFASMEQHYMYYVS AVDSYERLSRILYADVIPDKVNGIVPEDNDIAFENIDFSYEKDEFKMEKLSFSIAEKTMT ALVGESGSGKTTITNLLLRFYDVHKGKITLGGTDIRDIPYDELLDRISIVMQNVQLFDNT IEENIRVGKKGATKEDIIKAAKKARIHDFIMSLPKGYETDIGENGGILSGGQRQRISIAR AFLKDAPILILDEMTSNVDPVNESLIQDAITELAKNRTVLVVAHHLKTIQKADQILVFQK GNLLEKGKHGELLAKNGYYTKLWKAQYEV >gi|224531368|gb|GG658184.1| GENE 3 3982 - 5346 240 454 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 240 432 16 217 245 97 30 4e-19 MNGLIPHYYKGKMKGEAFASGKDISKLSLHEIGHIVGTVFQDPRSQFFTTTTDEEIAFGL QTICKSRDEIKQRVEEVYAELDIEELKGKSVFELSSGQKQKIAIASIYAMNPKVLILDEP SANLDMKATFDLFLILEKLKKKGTTVVLIEHRLYYVKSLFDRFLLVKDGEIALDLSREEV IHLEGEFWDENGLRTLELEEYRISEKKDSYQLNDESINGKGLRFCYPNVAKDGKKQKQYI LNHLDFNMECGIAIGLIGLNGTGKTTFARVISGLEKIKEGKIWTGKDNSLNHKDLMDMSY FVFQDSDYQLFSESVLDEMLLGISSKDKKENTQKAKSILNVLGLDKYIDKHPFALSRGEK QRLTIACGMMKQAKVFIYDEPTSGCDKDSMLSVAKLIEEQLKNGTTVLVISHDFEFLANT VSKLWVMGDGKIESVLNMSESNKILILDKMRGGR >gi|224531368|gb|GG658184.1| GENE 4 5351 - 6052 317 233 aa, chain + ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 6 212 3 209 226 79 28.0 6e-15 MDRKTVDPRIKLTLLPIVGFTSFFISDTILLFGLILFAFFLYVYSSMWKRALRFILFFVL LYCIELGLGKFREASIVFAIYMFIYFASRMTLIAMFGGYITKTTSVSEMLEALNRMKVPR SIGIPFSVLLRFVPTIKIELKALKENMKIRGIVTSRFFPLLHPIKYIEYTLVPLLMRMIK ISDELSASALIRGLDSDENRVTLTKLRFRWADLLIGLLGALMIALVIVIQKIY >gi|224531368|gb|GG658184.1| GENE 5 6063 - 6647 644 194 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0145 NR:ns ## KEGG: HMPREF0868_0145 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 194 1 194 194 302 96.0 4e-81 MKNKLNGRDFITIGIFNAIGIVIYMAVAFAMATTVIGGFIASGVSFMVAATVYILMALKV KKNGVFTISGTLLGLIALSGGHLPHAVFAVIGGIICDLIIGNYESKGRMIIGYGTFALAD FLGTVIPVILFGTASFVERASKWKMSEAQINEALSYFKVSWAVGFGLITFVLACIGALVA TRILKKHFEKAGVI >gi|224531368|gb|GG658184.1| GENE 6 6899 - 7315 355 138 aa, chain + ## HITS:1 COG:no KEGG:CD0435 NR:ns ## KEGG: CD0435 # Name: not_defined # Def: putative sigma factor # Organism: C.difficile # Pathway: not_defined # 1 137 25 161 161 208 86.0 6e-53 MPKEYYLYVNGQRVKVSEQIYKVYWREKEHEKYLEQVDKKNHLLFFSSLDHDGHFVDNIV DESVDVEKIMETQMMIETVRNAISRLNAEERDIIERLYFNDETLSSVATEKKVSYQAIQW RKNNILKKLKKLLEELLD >gi|224531368|gb|GG658184.1| GENE 7 7653 - 7727 158 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVGALAATLESHHRPLLRRAGLNY >gi|224531368|gb|GG658184.1| GENE 8 7767 - 7922 208 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKKKEVKKDKDKKQIADDYSKKITYSTSESEKLDLLDIVEMYLCKSCVRI >gi|224531368|gb|GG658184.1| GENE 9 8021 - 9685 1128 554 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 7 300 11 300 301 180 34.0 5e-45 MRNTACMYLRLSREDGDSNESNSISNQRQIIKSYAKEKNIDLFYEYVDDGYSGSNFERPN FKNMIDDLNKGKFSIIMVKDLSRFGRDYIESGKYLQKIFPEKGIRFISVNDNYDSDNADV SDTHLILPIRNFINDSYCRDISMKVKSSKEVKRKNGEFIGSFAPFGYKKDDRNKHQLVVD TEVAHIIERIFNMKIEGYSSKAIADFLNSIGTVTPSKHKENNGDNFNTGFVVKKAKWDAK MVNRIILNKVYIGVLEQGKTTKLNYKSKHEVDVSKEDWIAIENAHESIVSKSIFALANKM LLRDVKQSKDKPYILSGMLYCKDCGSPMIRRKVRDKIFYICSEYNNAGECSRHSVKEDYV THATIHALNEYLSKYNELLKKVSEIDVSKFKLKVDFESLYAEKRKYERLRKSLYMDLEEE LITTEEFERFRKNYLIKIREIEKQIITKQNIVNELKMKINDKDSFVSEIVPNPESDELNR LSLVSFIDRIEIGEDNVINFVFNNIETVNLLQAIVDSDKVEAKDTHKVRLISMGKLFGEH LERVEPKLAVGGVC >gi|224531368|gb|GG658184.1| GENE 10 9685 - 11352 1124 555 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 24 318 10 301 301 144 31.0 5e-34 MARTSKRYIRKSEEQTQKVFYKAGIYTRLSSERKEEWREKSSSIETQVLCCKEYALKENI KVVNIYTDYEYSGTNFERPQFQEMMQDIRERRINCIIIRDLSRLGREYLEMGRLIDKVFP FLGVRFISVNDKVDTVKDLDSKKSFEVTLKNIVNDMYAKDISVKIKTSKHNRARNGYFIG SVPPYGYKVVKLKEGQKLEVDENVRFIIEEMFRLTLEGKSQYEVAKHFNTKGYATGMVYY KTGRIYRQDGDPQWNKSTISKMLTNRAYTGTLVQGVKQQNLAKGMKQQFVDESQYIVYEN AHEPIISKEDFEKVLQGRADRLKNNAFGAEMHNFERDYENRYKGLIFNNATGKELYRRTR IYGINHDRLYYSFQNDTFTGKIDNEVRVFIMERDLDKAMSEKVAEFITKATSKAKLIERV STRFSESIGKLNEDISKLKTKTQKEELLIQKAYEEYSLGKIDREVYSLKREIALSHIATI NNEVISIEKVVKDLERDKRISIKWIKDVFSAKKDEKLPADLIHSLVEKIIVHGNHNFEII FKFSMDSLMGGVKDE >gi|224531368|gb|GG658184.1| GENE 11 11345 - 12838 751 497 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 5 309 10 301 301 171 35.0 3e-42 MSKIALYIRLSVEDQMKKDESESIINQRYFLNDFLDRNDEFKSFQRKEYIDDGYTGTNEK RPSFQRMLEEVKNGKINAIIVKDLSRFMRDYISLGDYLENIFPFLGIRFIAINDGYDSAK EKGNGTDLDIQFKGLLYDFYTKDISQKVKTVTTELKKQGKFLAWSPPFGYMKDPDDKHNI IIDEKTAWIVRKVYDLALTGLASRKIAAVMNEENIPTPNERKKELTSMDYEYNIVSSDTR DAPTWTNGTVVDILSNENYTGTYVFNMQEKSLLTPGSFKFNPKEEWGRVYNHHEAIISRE EFDKVQEIKEKNSFLKGKNTDYPWRTKSPLQGFARCPTCNHILGLTQSKFKRPDGSMRIH KYFHCRICKCNNVEHKNSRVDKLEEQVLSLIKEKYGEAEVKPKEKISIKDIEKKIEKLQA KKMSDFEKYKLGKMTKAKFVESKNQIDNEIDRLEEKIKLSSNEAEVVTDNELTRELMEKY VESVICEGSIVQKIIWK >gi|224531368|gb|GG658184.1| GENE 12 12829 - 13797 714 322 aa, chain + ## HITS:1 COG:NMA1038 KEGG:ns NR:ns ## COG: NMA1038 COG0286 # Protein_GI_number: 15793994 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Neisseria meningitidis Z2491 # 32 317 228 513 514 369 63.0 1e-102 MEIDARESEKSLSFRCLKIDNVFCVSRLTREGSGSLLLQMKKQFEEHIIEEGFFGQEINM TNFNLARMNMSLHNINYNNFSIKRGDTLLNPLHNEEKPFDAIVSNPPYSIKWVGDADPTL INDERFAPAGKLAPKSYADYAFIMHSLSYLSSKGRAAIVCFPGIFYRKGAERTIRKYLVD NNFVDCVIQLPDNLFFGTSIATCILVMAKNKTENRVLFIDASKEFKKETNNNILEEKNIN TIVEEFRNREEKEYFSRYVGREEIEDNDYNLSVSTYVEKEDIREIIDIKVLNQEIEETVR KIDSLRASINEIIKKLEEEGES >gi|224531368|gb|GG658184.1| GENE 13 13981 - 15249 829 422 aa, chain + ## HITS:1 COG:HP0848 KEGG:ns NR:ns ## COG: HP0848 COG0732 # Protein_GI_number: 15645467 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Helicobacter pylori 26695 # 133 399 7 292 298 148 37.0 2e-35 MKKFEELLKNEKVEWKKIGDIITKFSEKQRNKVNLKLVYTVSKEYGLISSKEYWKNKERR EDYTVYSEDLSNYNIIKKNMFAYNPARLNIGSIDCLFDREEGILSPMYTIFSIDEEIINS KYLLYFIKSPKILKIINDKKEEGARFRFDFNRWKKIEIPIPSLETQEKIVKILDNFTNYV TELQAELQAELQARVKQYQYYRDMLLSEGYLRKISEERFLKTNSVIEIYKLNEVVEIKRG KRLVKSQLSELEKYPVFQNSLIPLGYYKDKNFEGNKTCIISAGAAGDIFYQAEDFWAADD VFVLSPSKKIVDKYLYYFLLSKQEFIKSKVRKASIPRLSRDEVEKIDVLIPSLELQNKIV EVLDKFQSLLSDTKGLLPQEIEQRQKQYEYYREKLLTFEVKCDTRHDTTRHDTTRHDTTR NT >gi|224531368|gb|GG658184.1| GENE 14 15185 - 15910 712 241 aa, chain + ## HITS:1 COG:jhp0726 KEGG:ns NR:ns ## COG: jhp0726 COG0732 # Protein_GI_number: 15611793 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Helicobacter pylori J99 # 1 237 211 443 454 152 37.0 6e-37 MIHDTTRHDTTRHDTTRHVILNSYFILLKEAAQIVNISLSTLVWKRLGEVGRFENGTGMP KTMFDNHGEVLAIHYGHIYTKYNIFVKEPIVKVSMENAKNLKKVKKGNLVIAKTSENLDD VMKTVAYLGEDEVVTGGHSAIFRHGANPKYLSYVFNGADYFIKQKNKLAHGVKVIELSTT DMEKFQILIPPIHIQEYIVSILDKFDMLTNDLTQGLPREIELRQKQYEYYREKLFDFLKN N >gi|224531368|gb|GG658184.1| GENE 15 15922 - 18942 2974 1006 aa, chain + ## HITS:1 COG:HI0218 KEGG:ns NR:ns ## COG: HI0218 COG0610 # Protein_GI_number: 16273673 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Haemophilus influenzae # 9 1006 4 1022 1026 1046 56.0 0 MFEEVKSGFSTIAEMTNGIILANFEKQYDVRETAYQSEAELERSMIANLVSQGYERFVAK SKDDLYQNLKVQIEKLNGVFFSIEEWKRFLVEYLDSPNDGMIEKTRKVQENHIYDFIFDD GHLKNIKIIDKNNIHNNFLQVMNQFQQEGNHHNRYDVTVLVNGLPLVHIELKKRGVNLHE AFNQIHRYSKESFNQENSLYKYVQIFVISNGTYTRYFANTTAQNKNHYEFTCEWADAKNK VIRDLEDFTKTFFEKRTILEVLTKYCVFDTSNILLIMRPYQIAATERILWKIKSSYESKK AGKVEAGGFIWHTTGSGKTLTSFKTARLATALEFIDKVFFVVDRKDLDYQTMKEYQKFQP DSVNGSKDTKELKRSIEKEDNRIVVTTIQKLNEFVKRNPNHDIYEKHCVFIFDECHRSQF GDAQKNIRKSFKKYYQFGFTGTPIFPENSIGGDTTAGIFGAQLHSYVITDAIRDAKVLKF KVDYNNITAKFKSAEQEMDDKKLAKLENKMLLHPERITEITKHILKVFNMKTHRNEYYDV KNRRLNGFNAMFAVQSVEAAKLYYEEFEKQQEAFPEAKRLKIATIYSFTANEEQRMIGEI AEEDFDTSAMNSTAKEFLDKVISDYNETFQTNFSTDGNGFQNYYKDLALKVKEKEIDLLI VVGMFLTGFDAPTLNTLFVDKNLKYHGLIQAFSRTNRILNKVKTFGNIVCFRDLEKATQE AIKTFGDKNSVNIILEKSYEEYIHGFKNEETGEVIKGYEDICREMIEKFPEPMEIELQTE KKEFAELFGELLKSENILRNFDEFENFESIISERQMQDMKSVYVDIREQFVNERKSNSSE KEQIDFSDVEFQIDLLKTDEINLDYILTLILEKSKEHEDIESLKTEVRRIIRSSLGTRAK EELIMDFINETKLSTLKNTDDILESFYSFAKKEKECKIDTLLEEEKLKDNSKFFIEKAIK KGYVEYAGDELDSMLPPTSRRQGAREKKKETVLEKIRNIVEVFIGI >gi|224531368|gb|GG658184.1| GENE 16 19087 - 19887 941 266 aa, chain + ## HITS:1 COG:FN0391 KEGG:ns NR:ns ## COG: FN0391 COG0561 # Protein_GI_number: 19703733 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Fusobacterium nucleatum # 1 264 1 263 267 237 47.0 2e-62 MKYKAVVCDMDGTLLNGEHRVSERSKNIIKTIIEKGVKVFLASGRPYPDIQYFKKSLGLN SYSISSNGAVVHDEQGKEIMYYSLEKELLSELLNLPFGNLHRNLYTRNSWYVEVALKELL EFHKESGFAFQQISNLAEKNDGNATKLFFLDESEKSILDFEKKLKAKFEDRVSITLSTPN CLEIMKKGVNKGRAVKDTMQKLGIPLEEVIAFGDGLNDYEMLSLVGNPFVMSNASPRLLK ALSEVPRAPKNTEDGVAQILERLFLK >gi|224531368|gb|GG658184.1| GENE 17 19944 - 20969 1413 341 aa, chain + ## HITS:1 COG:FN0618 KEGG:ns NR:ns ## COG: FN0618 COG0687 # Protein_GI_number: 19703953 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Fusobacterium nucleatum # 1 341 1 342 342 442 64.0 1e-124 MKKLLLALCSSLLLLACGAKDDTNSLYLYGWADYIPHEIYEDFEKETGIHVVEDIFSSNE EMYTKLKAGGDGYDIVMPSSDYVEIMMKEGMIEKLDKSKISTLENIAPFIMQKLQAFDKN NEYAVPYNTSVTVIAVNKNYVKDYPRSFDIFNREDLQGRMTLLDDMREVMTSALAIHGYD QKTPSVEAMEKAKQTILSWKKNIAKFDSESYGKGFAAGDFWVVQGYPDNIFRELSEEERA NVDLIIPEVGAFGAIDSFVILGNAKHKENAYKFIEYIHRPEVYAKLSDILELPSINEPAA KLMKTKPLYELSELEKVQVLMDIHETLDLQNKYWQEILIAD >gi|224531368|gb|GG658184.1| GENE 18 20979 - 22076 1275 365 aa, chain + ## HITS:1 COG:FN0617 KEGG:ns NR:ns ## COG: FN0617 COG0592 # Protein_GI_number: 19703952 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Fusobacterium nucleatum # 1 363 1 363 364 283 40.0 4e-76 MKFKIKREEFISVLSDYTSILKENSIKPILSALFMEVKENELVFMGSSIEMDYRKQIQCE GMEEGAVAFKPALVLEYIKLLEEEWLTVEKLDGFLKIANGEFAILEEENYPKIVELASMS LLQIQGNEFAKYLETVKFSASQTPENLALNCIRVVFGKEKINFVSTDSYRLLYLEKKIGA QFERAISLPLEAVNVIIKLLKEKTEVISLELSGENLLLLWEGTYFSCRLTAVPYPNFQGI LNQNFFDKKMEFCLEDLKAAMKRVITVAKTSIDAKYGGTFDFKGKQLVVKAVTTGRAKTQ QKVAMMKEGDDFIASLNCKYLSEFLDTISKNVIIYGKNSSSMFRVMEEGNEELIYILMPL ALREV >gi|224531368|gb|GG658184.1| GENE 19 22078 - 22851 880 257 aa, chain + ## HITS:1 COG:FN0875 KEGG:ns NR:ns ## COG: FN0875 COG0566 # Protein_GI_number: 19704210 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Fusobacterium nucleatum # 7 253 9 258 261 211 50.0 1e-54 MRDILKISSLENEQLKFFSKLKKKKYREEAKLFLAEGRKFLEYSENASYVLFREDIPIEE TILEKFNCPIISLSSKCFEKVSVQENSQGVIILYSYKNIVLSRDARQLIILDDIQDPGNL GTIIRLVDASGFSDIILTKNSVDYYNEKVVRSSMGSIFHVNLHTMEKIEIVDYLKKQQYN IVVTSLQEDSIPYMEMSLDERNAFVFGNEGHGVSKEFLDIADEKVIIPISGQAESLNVAM ALGILLFYSRDLKRVLE >gi|224531368|gb|GG658184.1| GENE 20 22892 - 23392 758 166 aa, chain + ## HITS:1 COG:FN0915 KEGG:ns NR:ns ## COG: FN0915 COG2190 # Protein_GI_number: 19704250 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Fusobacterium nucleatum # 1 166 1 164 164 206 63.0 2e-53 MGLFNNLFGKKEEKKVVTIYAPVNGTVIDLAEIPDPAFAEKMVGDGCGMEPKEGAICSPV NGEIANIFDTRHAVSFDSEDGLEMIVHFGIDTVKLKGEGFKALRGEGETKVGDAIVEYDL AYIAANAPSTRTPVIINNMEEVEKIEVIALGKEVKAGDPIMKVTLK >gi|224531368|gb|GG658184.1| GENE 21 23392 - 23838 610 148 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467230|ref|ZP_05631541.1| ## NR: gi|257467230|ref|ZP_05631541.1| hypothetical protein FgonA2_07286 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 148 1 148 148 237 100.0 2e-61 MYLDDFRDSLAFYDEETHKVLKVVNFQPVLRYVHSEYVSDGRKYVHEILKEYPKYRKIIV DEISEEYYAREYADTMWQRDCEFFFQEVKTILKQCNYEFLSMPKLERKKKITRLEELFSR YENTWQYQYVDFENVKEDYRYILQWKNR >gi|224531368|gb|GG658184.1| GENE 22 23854 - 24549 806 231 aa, chain + ## HITS:1 COG:Cj1387c KEGG:ns NR:ns ## COG: Cj1387c COG2964 # Protein_GI_number: 15792710 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 13 228 1 215 218 59 29.0 6e-09 MDAPFLFKVGGKMTEFQKEYYSGMIEFLSAVFGHMIEISLFEVLANKKTSLCAKSKNCLK DLGDEVDRNLLFCIREYKKEQKYTAKLPWKEKNGDLSRVSFYYIQDEKKNLTGILCIKKN ISPMIVAANFLNESLKALTGGPERNLEEEVSNKGKWKQENTLLKYSQYVIEDYFDSLNVP SYAMTVEERIKVVETLNQKGIFQLKGNIIEVAKRLDISEKTLYRYLKKEIE >gi|224531368|gb|GG658184.1| GENE 23 24780 - 26105 1637 441 aa, chain + ## HITS:1 COG:FN1944 KEGG:ns NR:ns ## COG: FN1944 COG0733 # Protein_GI_number: 19705249 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 6 441 20 459 459 355 45.0 1e-97 MEKHFKKRDSFQNKIGFILACVGSAVGMGNIWLFPYRVGEFGGAAFLFPYLFFVVLLGLT GVSGEMAFGRAMRSGPLGAFKKALEKRGKKYGAFLGFIPVLGSLGIAIGYAVVVGWILKY TVQSFSGILQVTENYGELFGTITTRYSSLTWHFTAILISLLIMVAGIQGGIEKINRVLMP LFFGLFCLLAIRVFFLENSISGYEFLWKTDFEKIFQIKTWIFALGQAFFSLSLAGSGTVV YGSYLKEEVDVINSSIHVAFYDTFAAILAALVIIPAVFSFGMEVSAGPGLMFLVMPSVFQ QMPFGRIFSSLFFLAVFFAGITSLVNLFESSIEALEEKFSFSRRKAVSIVMIFSFLIGIF VEDVNYLGKLMDIVSIYLIPLGAFLSAILFYWVCGDEFVRREIQKGRLKSFPKCLLPMGK YVFCGISFVVFILGIFYHGIG >gi|224531368|gb|GG658184.1| GENE 24 26211 - 27014 1025 267 aa, chain + ## HITS:1 COG:FN0870 KEGG:ns NR:ns ## COG: FN0870 COG0607 # Protein_GI_number: 19704205 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Fusobacterium nucleatum # 34 267 3 240 240 170 39.0 2e-42 MKRILNFDEDMEQILRKMEEEVGIFCSRERNRNLGIQNLGDYCYFSVGKTMDELEKEGIN FYKSKDVANDYNGPKPSYSMVHVKLLYSPEFKILGAQMIGRGNLERRYEVLKKFLSEGKG LKELAEYSIYGKTLEEEMDILNLSAFYAMEVSKPLVPVEEVRKLQESEAFFLDVREEEEH EYACILGSTNIPLHSLVQRLSEIPRDKKVFVYCRSAHRSLDAVNFLRGMGYDNVYNVEGG FIAISYEEYTKDKEEKREKIVSRYNFE >gi|224531368|gb|GG658184.1| GENE 25 27027 - 27803 957 258 aa, chain + ## HITS:1 COG:FN0869 KEGG:ns NR:ns ## COG: FN0869 COG0561 # Protein_GI_number: 19704204 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Fusobacterium nucleatum # 1 258 7 270 270 179 37.0 5e-45 MKWIISDLDGTLLNNDRTVGEKTILGVQNLLKKGYPFVIATGRGFASANTIREKLGVPIY MVCNNGASIYSPKGELIFENYIPVEMVKKVTACLEKYRVDYRGFFQDYYFMPSYGKEDMK RIEYKAVILEKDEDFQILEKILVVDPNTDLLRKIQKELQEEVGEELTITLSSSECLDINS KNCSKAAGIEKVATYLQLHLQDAIAFGDSENDFAMLASVGKAVSMKGTYAAQEKDYEVTE FTNHEDGVIRHLEKYIKF >gi|224531368|gb|GG658184.1| GENE 26 27870 - 29378 2149 502 aa, chain + ## HITS:1 COG:FN0396 KEGG:ns NR:ns ## COG: FN0396 COG0747 # Protein_GI_number: 19703738 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 2 493 3 498 511 380 39.0 1e-105 MKKWTMSIILCLFSFLLLACGGKEAVEGEKKDTLVYAQISEGKTLDPQDTTEQYSQRSVS LIYSRLVEINEKTGGIDPGLARSWERPNPNEIIFHLRNDVKFSNGYDFTAEDVKFTIERA QSLPKVAHLYKPITEITILDPYTISLKTTEAFAPLLNHLTHKTSSILSKKYYDEVGDKYF ENPVGTGPYMLKEWKIGDRLELEANPNYFDGEPSIKHVVFRAIPEESTKVIGLQTDEIDM VGDVEAVSRETIAADDNLALIEGSSVNTIYLGMNTERKIFADKEVRKAISMGVNRDDIVN SLLAGAGQKANSFLAPTVFGYSKDSKVYEYNPEEAKKIIAEKGLVGSKIKIAVSNSQLRS QMAEIIQAQLKEIGLEVSIENLEWGTFLSATANGDVDMFILGWGPSTYDGDYGLFPNFHS SQKGGEGNRSQYANPKMDQLLEDARKEMDVEKRRSLYIEATDLINEEAVVLPLYYPLTSV GYNKALKGVEAESYPMIHKYSY >gi|224531368|gb|GG658184.1| GENE 27 29393 - 30466 1352 357 aa, chain + ## HITS:1 COG:lin1180 KEGG:ns NR:ns ## COG: lin1180 COG1363 # Protein_GI_number: 16800249 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Listeria innocua # 1 354 1 353 359 201 36.0 2e-51 MKRVLEMTKAFTNAFGAPGFEDDVLEEIKKQIPDMKWERDSINNLFIYFSEKEKQKPTVL LDCHSDEVGFMIEHINDNGSLRFLPLGGWHIGNIPAMSVIIKNSQGEYIPGVVASKPPHF MTEEERSRLPKLSELSIDIGTSSYEETVNLYGIEIGNPVVPDVNFSYDEKIGIMRAKAFD NRLGAVAAIEVLKQFQEMGKMLDVNLVVSISSQEEVGLRGAQVAAQRIQPDFVIVFEGSP ADDSFQSGREAKGKLRGGVQLRALDAAMVSNPRVLEFAKRIAREKQIPFQMIVREKGSTN GGKYHITGRGIPTLVLGIPTRYAHTSYCYASLLDTKAAIDLAREVIEELNQEKIETF >gi|224531368|gb|GG658184.1| GENE 28 30617 - 30898 496 93 aa, chain - ## HITS:1 COG:FN1024 KEGG:ns NR:ns ## COG: FN1024 COG0776 # Protein_GI_number: 19704359 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Fusobacterium nucleatum # 1 92 1 92 102 76 60.0 1e-14 MTKKEFVAALAKKAEVTGKEADKMVKCFLELVEESLVAGNDVKFIGFGSWETKKREARKL RNPQTGKEMKIAAKRVVKFKVGKALADKVAAKK >gi|224531368|gb|GG658184.1| GENE 29 31237 - 31350 64 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYFMPKIKMKKHKKRSYNIGHSVHRNQIVYDKSESFL >gi|224531368|gb|GG658184.1| GENE 30 31405 - 35082 4418 1225 aa, chain + ## HITS:1 COG:FN0990_1 KEGG:ns NR:ns ## COG: FN0990_1 COG0046 # Protein_GI_number: 19704325 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Fusobacterium nucleatum # 1 956 5 980 983 1076 57.0 0 MKNCRIFVEKKEGFNLEAKRLCKEWKEALQLSSLTKVRILNCYDVFGANDIEDAKKMIFS EVVTDMVSENFDETISHFAVEFLPGQFDQRADSAYQCMNLLSTENENVVITSGKLFLLEG SISSEDVEKAKKFYINPVEMREKDLKKLEQETLQFQSSVPMIEDFKGLKEEMGLAMSQED LDFVETYFKEEEKRMPTETEIRVLDTYWSDHCRHTTFETELREIIFPKGSFGEELQRVFD KYLADKQVSLMEMAKLIGKKMRKEGKLDDLEVSEEINACSVYIDVDVDGEIEKWLLMFKN ETHNHPTEIEPFGGASTCLGGAIRDPLSGRSYVYQAIRVTGAANPLEAFEDTLEGKLPQK KITTAAAHGYSSYGNQIGLTTGLVSEIYHEGYKAKRMEVGAVVAATPARNVRRETPIAGD IIILLGGKTGRDGCGGATGSSKEHTKDSLALCGAEVQKGNAPEERKIQRLFRKEKVSQMI KKCNDFGAGGVSVAIGELAEGLKINLDLVPTKYAGLNGTELAISESQERMAVVIAKEDEA SFLEEAALENLEATKVAEVTEEKRLILTWKGQEIVNLSRAFLDTNGVRQKAKVEVETPSG KNPFQEVLFQGNTLAESWQTCMKDLNVASQKGMVEMFDSNIGAGTILMPFGGKYQMTPSD VAVQKISVEKGHTTTASAITWGYNPNISSWSPYHGASYAVVESLAKLVSVGVDYRKVRLS FQEYFQKLGKDAKNWGKPFAALLGSLEAQESFGTPAIGGKDSMSGSFQDLHVPPTLISFA VAPVSIKEVISPEFKKVGSHIYLLKHQALENSMPNYEICKKNFTWLHEQITAGKVLSCMT IKMGGIAEALTKMSFGNQIGLELQNIGEDFFKLAYGSFILESEETLEFENLEYLGKTIQK YQIHILEKETSAILAADKLEQEWLNVLAPVFPYEYKEEKKEIYTLDTYVNTEIYHSKDRI AKPRVLVMAFPGTNCEYDSAKAFRDAGADPHILVFRNLKPSYIETSIEAMIQELKQAQIL MLPGGFSAGDEPDGSGKFIATVLQNPRIMAEIQNFLDRDGLILGICNGFQALIKSGLLPY GKLGTVTENSPTLTFNKMGRHVSQMVRTKIVSNKSPWLSSFHVGDEFIVPVSHGEGRFYV QEEELKSLIQKGQIVTQYVDFEGKATNEFRHTPNGSTCAIEGIVSPDGRILGKMGHSERK GEDLYKNIPGNKVQDIFSNGVKYFK >gi|224531368|gb|GG658184.1| GENE 31 35095 - 35571 725 158 aa, chain + ## HITS:1 COG:FN0989 KEGG:ns NR:ns ## COG: FN0989 COG0041 # Protein_GI_number: 19704324 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Fusobacterium nucleatum # 1 152 1 152 157 222 78.0 2e-58 MKVAIIFGSKSDIDVMKGAANCLKEFGIDYEAHVLSAHRVPELLEETLENLEKTGCKVII AGAGLAAHLPGVIASKTTLPVIGVPIKAALEGVDALYSIVQMPKSIPVACVGINNSYNAG MLAVQMLAIENEDLSKKLIEFRKNMKAKFAEDNKTVEL >gi|224531368|gb|GG658184.1| GENE 32 35601 - 36317 1040 238 aa, chain + ## HITS:1 COG:FN0988 KEGG:ns NR:ns ## COG: FN0988 COG0152 # Protein_GI_number: 19704323 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Fusobacterium nucleatum # 1 237 1 237 237 406 89.0 1e-113 MERREFLYEGKAKQLYATDDKDLVIVHYKDDATAGNGAKKGSIHNKGIMNNEITTLIFNM LEEHGIKTHFVKKLNERDQLCQKVQIFPLEVIVRNLIAGSMAKRVGIAEGTKPSNTIFEI CYKNDEYGDPLINDHHAVALKLATYEELKEIYSITAKINDLLREKFDKIGITLVDFKIEF GKNAKGEILLADEITPDTCRLWDKVTGEKLDKDRFRRDLGNIEEAYIEVVKRLTEAKA >gi|224531368|gb|GG658184.1| GENE 33 36346 - 37695 1724 449 aa, chain + ## HITS:1 COG:FN0987 KEGG:ns NR:ns ## COG: FN0987 COG0034 # Protein_GI_number: 19704322 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Fusobacterium nucleatum # 1 447 1 448 448 748 83.0 0 MGILAVHSKKVRNDLVGIGYYGMYALQHRGQEGAGYTICDTITDNIVRQKTIKNVGLVSD VFLAEDFQKFTGNILIAHTRYGSASTGSSRNCQPIGGESAMGMISLVHNGDLSNQEELKK DLIEKGMLFHTAIDTEIILKYLSIYGIYGYRDAVLKTIEKLKGCFALAMIINDKLIGVRD PEGLRPLCLGRIKEDMYVLASESCALDAIGAEFVRDIRAGEMVIIDENGVESIQYQESNK KASSFEYIYFARPDSVIDGISVYEFRHTTGRYLYEQHPVEADIVIGVPDSGVPAAIGYAE ASGIPYSVGLLKNKYVGRTFIAPVQELRERAVKVKLNPIRRLIEGKRIVVVDDSIVRGTT SKKLIDTLYEAGAKEVHFRSASPIVIEESYFGVNIDPDNILMGSHMSVEEIREKIGATTL EYLSLENLKKSLGNGEDFYIGCFKEDEER >gi|224531368|gb|GG658184.1| GENE 34 37707 - 38723 838 338 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 4 335 13 344 356 327 49 2e-88 MSNSYKSAGVDKEEGYKAVELMKQNVLKTHNKSVLTNLGSFGAMYELGAYKNPVLISGTD GVGTKLEIALKQKKYDTVGIDAVAMCVNDVLCHGAKPLFFLDYLACGKLDSEVAAELVSG VTEGCLQSGAALIGGETAEMPGFYKVGDYDIAGFCVGIVEKENLIDGSKVQEGDKIIALA SSGVHSNGFSLVRKVLTDYDEVISTKEHGSGKVSDILLTPTRIYVKNILKVLENFEVHGM AHITGGGLPENLPRCMGKEFSPVVWKDKVQKLEIFDIIQKRGNIPEEEMFGTFNMGIGYT LVVKAEDSEKIIDFLNSLGETAYEIGYIEKGDHSLCLK >gi|224531368|gb|GG658184.1| GENE 35 38711 - 39271 834 186 aa, chain + ## HITS:1 COG:CAC1394 KEGG:ns NR:ns ## COG: CAC1394 COG0299 # Protein_GI_number: 15894673 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Clostridium acetobutylicum # 1 182 1 190 204 163 48.0 2e-40 MFKIAVLVSGGGTDLQSILDGIEDRKLTDCEVSYIVADRECGALERAKKYNIPFCILKKG ELNQFFQEKDMDLIVLAGYLSILPSDFLQHWEKKIINIHPSLLPKFGGKGMHGSHVHKAV LAAKEEKSGCTVHYVTEEIDGGEIILQKEVPVYAEDTVELLQERVLEQEHILLPEAIQKI KEERKK >gi|224531368|gb|GG658184.1| GENE 36 39273 - 40775 1845 500 aa, chain + ## HITS:1 COG:FN0982 KEGG:ns NR:ns ## COG: FN0982 COG0138 # Protein_GI_number: 19704317 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Fusobacterium nucleatum # 1 500 1 504 504 663 65.0 0 MKKRALISVFYKENILEFSKFLMEHDYEILSTGGTYRYLQENGVPVIEVSEVTKMQEMLD GRVKTLHPVIHGGILAIRGNEEHMSCIEKLGIHTIDMVVVNLYPFFEKVQSDISFEEKIE FIDIGGPTMLRSAAKSFQDVVVISDPSDYEVVKEDISISGEVSYEHRKRFAGKVFNLTSA YDAAISNFLLEEDFPRYFSTSYEKKMDLRYGENPHQKAAYYVSTTENGAMKDFIQHQGKE LSFNNLRDMDVAWKVVQEFDEEIACCGLKHSTPCGVAIAETVEDAFEKAYSCDPTSIFGG IVSFNREVNAKTAEELTKIFLEIIIAPSYTKEALEVLAKKKNLRVIECHQKPTDKMNLVK VDGGLLVQEEDRVNLDNLQVVTKKAPTEEEKKDLLFGMKVVKHVKSNAIVVVKNQMALGI GTGEVNRIWATQQAIERAGKGVVLASDAFFPFRDVVDCCAENHIQAIIQPGGSMRDQESI DACDEHGISMIFTGIRHFKH >gi|224531368|gb|GG658184.1| GENE 37 40792 - 42018 1698 408 aa, chain + ## HITS:1 COG:FN0981 KEGG:ns NR:ns ## COG: FN0981 COG0151 # Protein_GI_number: 19704316 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Fusobacterium nucleatum # 1 405 1 424 426 495 60.0 1e-140 MRILVIGSGGREDAIAWKLQQNPRVEEIIIKSSSLSIEELLKIAKEEKIDFTMVGSEELL VKGIVDAFEKENLKIFGPNKQAAMLEGSKAFSKDFMKKYGVKTAKYENFKNAEEAFAYIE KQDYPLVVKASGLAAGKGVIICQSLEEAKKAVQEIMVDKVFQDAGAEVVIEEFLEGVEAS ILSITDSKVILPFISAKDHKKIGEKETGLNTGGMGVIAPNPYVTKKVSEAFQKDILEPTL RGMKEEGMKFAGIIFFGLMITKKGVYLLEYNMRMGDPETQAVLPLLESDFLEMLEDALEG NLDANKIKWSKDSSCCVVLASGGYPVSYQKGYEIHGLDKIENHVFFAGVKKESGKYYNNG GRVLNIVATGANLEKAIEKAYRDIEKVSFQDSCYRKDIGTLYFPVIEI >gi|224531368|gb|GG658184.1| GENE 38 42064 - 42666 768 200 aa, chain - ## HITS:1 COG:CAC2272 KEGG:ns NR:ns ## COG: CAC2272 COG0491 # Protein_GI_number: 15895540 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Clostridium acetobutylicum # 10 196 9 198 199 131 42.0 8e-31 MLEIKKQALGLYRTNCYVLIQEGKSVIIDPGFSPEIIEDMIAGTTPLAILLTHGHLDHVN AVKALHQKYHLPIYMSKKEDAILKLTTSVPEGYHRDFEAEYFDLQEGDLQIENFSFEIIA TPGHTEGSLCIRCENHLFTGDTLFRGTIGRTDIFSSDPKKMKESIQKIKKLDPKYIVYPG HSSNTTLEEEFLTNPFYQEM >gi|224531368|gb|GG658184.1| GENE 39 42678 - 43463 1085 261 aa, chain - ## HITS:1 COG:BS_yrpC KEGG:ns NR:ns ## COG: BS_yrpC COG0796 # Protein_GI_number: 16079734 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Bacillus subtilis # 1 255 1 256 265 223 47.0 2e-58 MKIGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGTKTKEEIIKYTSEAVDFLVK EGVKAIVIACNTATSAAIQELRERYSLPIIGMEPAVKKAIDFHPEKRVLVIATPMTVQGE KLHNLIEKVDTEHLVDAIALPKLVTFAEEEIFEDEVISAYLQEEFKQLNLEDYSSIVLGC THFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINALEKNEKRKIEYYYSGRKLSE IQDITKMGRYIHRLNHMLMIK >gi|224531368|gb|GG658184.1| GENE 40 43600 - 45294 2381 564 aa, chain + ## HITS:1 COG:FN0941 KEGG:ns NR:ns ## COG: FN0941 COG0405 # Protein_GI_number: 19704276 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Fusobacterium nucleatum # 22 564 34 579 579 582 55.0 1e-166 MKKSFLCSISLFLLLSAGLCAEEWKPYDEQGNVVRTGRDATGQNAVVSTARYEASKIGLD ILKNGGNAIDAAVGVGFALGVCEPQSSGLGGGGFMVVRLAKTGETKFIDFRETAPAKATP DMWVLDKDGNVIGNEKEFGGKSIGVPGSVKGFLYALNQYGNLKRKDVIQPSVDLARNGYK VSAIMNMDMKNQLENMIKYPETAKIYLKNGKPYEVGDTIKNPDLANTMEKIIEKGEEAFY SGPIAESIVKSAQEAGGLLSMEDMKNYSLRIKDPVHGNYRGYEIITSTPPSSGGAHIIQI LNILENYDMKSIPVGSTRYYHLLSEAMKMAFADRAKFMGDTEFVKIPLQGVINKDYAKTL QAKIDETKSQDYSEGDPWKFESKDTTHYSIVDKEGNIVAVTFTVNGVFASGVVAKDTGVL LNNEMDDFDTGHGKANSIIGGKKPLSSMSPTIILKDGKPVASLGGLGAQKIITGITQVAL LMMDYGMDIQEAINFPRIHDAYGTLTYEGRMNPQVVQELEKMGHEMKNGGEWLEYPCIQG VTMAEDGTLRGGADPRRDGKALGF >gi|224531368|gb|GG658184.1| GENE 41 46357 - 46974 732 205 aa, chain + ## HITS:1 COG:FN1861 KEGG:ns NR:ns ## COG: FN1861 COG1279 # Protein_GI_number: 19705166 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Fusobacterium nucleatum # 1 201 1 202 207 233 65.0 3e-61 MNHYLQGLLMGLAYVAPIGLQNLFVINTALTQKKGRVFLTALIVIFFDVTLAFACFFGAG AVMEKSNILKMLILFIGSLIVIYIGYGLLKEKVSMRETEVNIPITKVITSACIVTWFNPQ AIIDGTMMLGAFRASLPATESMKFILGVTSASCLWFLGISSFISLFSQKFDDKVLRGINL VCGIVIIFYGCKLFYSFIQILQGLV >gi|224531368|gb|GG658184.1| GENE 42 46974 - 47114 86 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451944|ref|ZP_05617243.1| ## NR: gi|257451944|ref|ZP_05617243.1| hypothetical protein F3_02686 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_07391 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 46 1 46 46 68 100.0 2e-10 MRREVQTLEDIRAAFEIYQSNLYYFHVTHHRDAKESDLYRTLYNTF >gi|224531368|gb|GG658184.1| GENE 43 47068 - 47337 95 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|317058494|ref|ZP_07922979.1| ## NR: gi|317058494|ref|ZP_07922979.1| predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] # 1 89 1 89 89 140 100.0 3e-32 MQKKVIYIGLYIIHSKYHRQGVGKNLFRKLENAFIQNKFQKIRLAVILENTISFQFWKQM EFIEKERKIWKGKSGLYKKVVIMEKCLKG >gi|224531368|gb|GG658184.1| GENE 44 47274 - 47810 588 178 aa, chain + ## HITS:1 COG:Cj1254 KEGG:ns NR:ns ## COG: Cj1254 COG3663 # Protein_GI_number: 15792578 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Campylobacter jejuni # 17 170 1 150 160 142 46.0 4e-34 MERKKRIVQEGGHHGEMLERIVHPFPAFYQKNSTILILGSFPSVKSREENFFYGHLQNRF WKMLAKIFEEEFPETQEQKKKLLKRHKIALWDVIHSCKIKGSSDSSIQDVIPNDLTEILR ESPIQKIICNGGTSYKYYKKYQEKILGKEAILMPSTSPANAGYSLERLVEIWRKEFKD >gi|224531368|gb|GG658184.1| GENE 45 47959 - 48273 254 104 aa, chain + ## HITS:1 COG:pli0008 KEGG:ns NR:ns ## COG: pli0008 COG3177 # Protein_GI_number: 18450294 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 86 158 243 254 75 39.0 2e-14 MEQHIQFEKIHPFPDGNGRTGRLLIIHSCLKEGMPPIIIPKEEKGKYISLLQSEDIKEFT KWGLELQKKERTRIEAFYNKEKSTIKDLKNPLGKKNERRKRGKF >gi|224531368|gb|GG658184.1| GENE 46 48524 - 48751 355 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451941|ref|ZP_05617240.1| ## NR: gi|257451941|ref|ZP_05617240.1| hypothetical protein F3_02671 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_07406 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 75 1 75 75 124 100.0 2e-27 MKQKEDWEEQLPQYLKHDIENVEKYSFKTSTVYDCYLDEVYGSINACQWDGVISIEQADY LRKKYWEGNYEKGRE >gi|224531368|gb|GG658184.1| GENE 47 48732 - 49700 843 322 aa, chain + ## HITS:1 COG:no KEGG:DSY5047 NR:ns ## KEGG: DSY5047 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 8 297 11 300 324 268 48.0 3e-70 MKKEENSIVDFTDIIENNPSFRAYSGANGIKKGILYHGKPYMLKITHRNKDSRYTNSILS EYICSKIFSILGFSVQEVILGKIMDNGKEKLCVACKDFKEKGEYLYEFLSIKNSLLKDES SNGSGTELSEILSTIKEQKFINKNEVTKFFWDMFIVDSYLGNFDRHNGNWGFLVNENTKS TRIAPVYDCGSCLYPAATDDDLILFLNSKEEMNKRIYTFPTSAIRLEDKKINYFDFLSST DNIHCIESLKRITSIISAKEIEVENFIESLPISNIRSTFYKTILKERKEKILEKALELNK NIEKSKENPWSKKIEKIHGIER >gi|224531368|gb|GG658184.1| GENE 48 49718 - 50350 556 210 aa, chain + ## HITS:1 COG:YPCD1.91 KEGG:ns NR:ns ## COG: YPCD1.91 COG1961 # Protein_GI_number: 16082774 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Yersinia pestis # 2 201 3 178 183 69 27.0 5e-12 MIYGYIRISSKTQNEERQIIALKDAGVSSDNIFIDRESGKNFNRASWQKLMAKLVVGDTL IIKELDRMGRNNKEMKENFELIKNKGCFLEFLENPLLSTRNKSQIEIELIQPLILHLLGY FAEKERDKILTRQKEGYDSLDTDEKGRKISKKKNKVVGRPSKIENLSLEQKRYIEAWIQG NIKISDCIKNTRIGKTSLFKIKKLRRAKIV >gi|224531368|gb|GG658184.1| GENE 49 50381 - 51205 904 274 aa, chain + ## HITS:1 COG:mlr2757 KEGG:ns NR:ns ## COG: mlr2757 COG3177 # Protein_GI_number: 13472455 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 30 242 29 242 263 125 34.0 9e-29 MNTQKQINLDLYKKFLDTKRPLEDCIVRKLETELKTSYIYHSNAIEGNTLTLKETDVILE YGITVKGKSLQEHLEVKGQEYAVNFLKEEVKHRTELNIELIKNFHSLILSGIDPLHAGTF KKYSNFIGGTNVQTVSPFQVEYELNQLIEKYNKDTNNNLIEKIAKFHADFEKIHPFSDGN GRTGRLIMNFELMKKGYPICIIRNEDRLEYYDSLELAQTKKDYSKIISFITTSLEHTFEF YFKHLSQDWKKELAEFQRIKTPFQKKEKDKEIER >gi|224531368|gb|GG658184.1| GENE 50 51202 - 51492 438 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451937|ref|ZP_05617236.1| ## NR: gi|257451937|ref|ZP_05617236.1| hypothetical protein F3_02651 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_07426 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 96 1 96 96 171 100.0 2e-41 MKYGYDSLFLTLLAFSFLGCGGTKYPVYKEDDKIDLLFEAIVNEDEKSMKELKVIPSQLT AGKNQGDKIATQEYFDWQEKIRAVEFIKAEKENKKQ >gi|224531368|gb|GG658184.1| GENE 51 51578 - 51856 387 92 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467259|ref|ZP_05631570.1| ## NR: gi|257467259|ref|ZP_05631570.1| hypothetical protein FgonA2_07431 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 92 1 92 92 159 100.0 1e-37 MNKIQTILDEIYEENIGYIQKNSYVPGTISVYYSEFQSDAANMYVSSLQKNFKKYLPNVT VESHMVKHEHINFLKFQLEGDHSNGIIIMNPK >gi|224531368|gb|GG658184.1| GENE 52 52312 - 52938 798 208 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315918389|ref|ZP_07914629.1| ## NR: gi|315918389|ref|ZP_07914629.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 208 11 218 218 309 100.0 7e-83 MKKTITEWLGDLKLTEKKINKIYQELKGKDLFRVSFAKDKEIYKTQWDKEQEEIKALYQS LKQFILNRDKMRAAILAFNATNTIKVGETDYVIALALEKMKKSDFVDINRLLEEQIYKMN VQTDNYLQNAEDKRDTLQSELSKKANSSTKKDNEAIEEIMKSFVVDKNDYLELVSELSKR KERNIEFLEQVNVQLNLKNATTFLEIDV >gi|224531368|gb|GG658184.1| GENE 53 53432 - 53608 374 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467261|ref|ZP_05631572.1| ## NR: gi|257467261|ref|ZP_05631572.1| hypothetical protein FgonA2_07441 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 58 1 58 58 81 100.0 2e-14 MASCETMKKGQVYVCEDCGFEVEVIKECNCHEDPNCPHDVHEDCCDFECCGKPLTLKK >gi|224531368|gb|GG658184.1| GENE 54 53795 - 55597 2853 600 aa, chain + ## HITS:1 COG:FN0777 KEGG:ns NR:ns ## COG: FN0777 COG0481 # Protein_GI_number: 19704112 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Fusobacterium nucleatum # 1 600 5 604 604 1020 86.0 0 MQQKQKRNFSIIAHIDHGKSTIADRLLEYTGTISARDMKEQLLDSMDLEREKGITIKAQA VTLLYKAKDGLEYELNLIDTPGHVDFIYEVSRSLSACEGALLVVDAAQGVEAQTLANVYL AIGNDLEVVPIINKIDLPAAEPEKVKKEIEDIIGLPAEDAVLCSGKTGIGIEDVLEAIVQ KIPAPHYEEEGPLKALIFDSKFDDYRGVITYIKVEDGSLKKGDKIKIWSTEKEFEVLELG IFSPHMVPKEELGTGSVGYIITGVKSIHDTRVGDTITHPNRPCLFPMAGFKPAQSMVFAG IYPLFTDDYEDLREALEKLQLNDASLTWVPETSVALGFGFRCGFLGLLHMEIIVERLRRE YNLDLISTTPSVEYKVTIEGQEQMIIDNPCEFPEPGRGRIHVEEPFIRGKVIVPKEYVGD VMGLCQEKRGIFLAMDYIDENRSMLTYELPLAEIVIDFYDKLKSRTKGYASFEYELSEYR ESNLVKVDILVSGKPVDAFSFIAHNDSAYTRGRAICEKLKDVIPRQQFEIPIQAALSSKI IARETIKPYRKNVIAKCYGGDITRKKKLLEKQKEGKKRMKTIGNVEIPQEAFVSVLKLNN >gi|224531368|gb|GG658184.1| GENE 55 55868 - 56410 587 180 aa, chain + ## HITS:1 COG:no KEGG:FN1814 NR:ns ## KEGG: FN1814 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 180 12 189 192 115 36.0 1e-24 MSSKKENLFLSLIVIIILCLAYILVQLTSKKNIGQIITTTQISAYKDLSNVNNSFYTELT NSLVEIEAIKEEEGKIPDISKLEEEEISPYLKDDLWEERGALEWQKIEYKTGIYYLGISK QVNLVGNYLIEFNLEEMDKSVIYYNNEQDDGRSLPKTISHLEEHWKEIVPYTGTEEREKF >gi|224531368|gb|GG658184.1| GENE 56 56422 - 57333 1374 303 aa, chain + ## HITS:1 COG:FN1812 KEGG:ns NR:ns ## COG: FN1812 COG0803 # Protein_GI_number: 19705117 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Fusobacterium nucleatum # 1 303 1 302 302 394 67.0 1e-109 MLKKVLAIFLFTIFSIFSLGANKLKVGVTLQPYYSYVANIAGDKVDLFPVIRGDLYDSHN YQPQYEDLKQLGKADVVVVNGVGHDEFVFDMIKAVPNKNKIKIIYSNAGVSLMPVSGSRS SEKIMNAHTFISITTSIQQVYNIAKELGKLDPANKDYYMKNAREYAKKLRKIKTDALAKV SAYKKIDFRVATMHGGYDYLLSEFGVDVKAVIEPAHGIQPSAKDLKEVIDVVKRDKIDII FGEAAFQSKFIDTLHKETGVEVRSLSHMTNGPYTKDSFEKFIKEDLDSVISAMQFVAKKK GLK >gi|224531368|gb|GG658184.1| GENE 57 57334 - 58050 224 238 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 7 222 9 216 309 90 31 3e-17 MSKGIRIEIKNLNLTLSNTEILKNINLTIQEGSIHCLVGPNGGGKTSLLRCILGQMPFTG EISFHYDEKEATGENGKYTIGYVPQILDFERTLPITVEDFMCMTYQTKPCFLGSTKKYKP IMEDLLKHLSMYDKRKRLLGNLSGGERQRVLLAQALYPLPNLLILDEPLTGIDKIGEEYF KNILIELKEKGVTILWIHHNLKQVKEMADFVTCIKQEIIFHGDPKVEIDEKRVLEIFA >gi|224531368|gb|GG658184.1| GENE 58 58065 - 58964 1011 299 aa, chain + ## HITS:1 COG:FN1810 KEGG:ns NR:ns ## COG: FN1810 COG1108 # Protein_GI_number: 19705115 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Fusobacterium nucleatum # 1 297 1 297 297 323 72.0 2e-88 MLDMIRNFVISLANQGILPEAFGYEFIVNALICAVFIGPILGAVGTMVVTKKMAFFSEAV GHAAMTGIAIGILLGEPMQAPYVCLFAYCILFGLFINYTKNRTKMSSDTLIGVFLSFSIA LGGSLLILVAGKVNAHILESILFGSVLTVTDIDIYILLFSAFVLCVVITPYFNRMLLASF NPSLASVRGVNVKLIDYIFIAVVTVITIASVKIVGSILVEALLLIPAASAKNLAKSMKGF VCYSILFSLISCIVGIVFPIQLQISIPSGGAIISVAGSIFFLTIIIRTIFKKFLEGEAI >gi|224531368|gb|GG658184.1| GENE 59 58961 - 59836 1097 291 aa, chain + ## HITS:1 COG:FN1809 KEGG:ns NR:ns ## COG: FN1809 COG0803 # Protein_GI_number: 19705114 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Fusobacterium nucleatum # 11 291 2 283 283 272 51.0 7e-73 MRKTQVLLGAFLISSSVFAKNLVLTSIPSTYSLGKELTKNTSIRVESVFGSDTSMTMTRE AIAGDGFILPKEKADAVIDISKIWVEDNLFERVRQENIHTVEIDASYPFDSKKSMLFFNY DKDGKVIPYVWMGTKNLVRMAAIVTKDFIALYPKETAKLEKNLVDFTAKVMEIEEYGNNA FLEVESTEVISLSQNIKYFLNDFNIFAEERNPEEITEENVGKIMEETGLKVFVSDRWLKK KIVKEIEKRGGSFVVLNTLDIPMDKDGKMDEEALWKSYKNNIDTLHKAFLK >gi|224531368|gb|GG658184.1| GENE 60 59865 - 60284 802 139 aa, chain + ## HITS:1 COG:no KEGG:FN1808 NR:ns ## KEGG: FN1808 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 15 139 1 125 125 183 70.0 2e-45 MRKKLVFILGTLLSVAALAHAPLVSVDDNGDGTIYVEGGFSNGASAAGIPVVIVKDAPYN GPEETFKGKEILYEGKFGADNSITLPKPATPKYEVYFNAGEGHIVGKKGPALTEGEQEAW KKAVDTFDFGDWKDYMLEK >gi|224531368|gb|GG658184.1| GENE 61 60317 - 61114 1336 265 aa, chain + ## HITS:1 COG:FN1807 KEGG:ns NR:ns ## COG: FN1807 COG5266 # Protein_GI_number: 19705112 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 265 1 264 264 272 52.0 6e-73 MKKLVLMAGVLTLSATAMAHTQYLYTDTLDVSGKKEVKMKTLFGHPGEGNEIGGVAVGTV DGKAMPTKEFYMIHNGEKTDLTAKVVDGIIKTDKNTVRTLDYTFTPADGLKGQGSFIFVM VPNHATDEGYTFYGAPKLIIAKDGAGSDWDKRVAPGYPEIIPLKHPADLWTEDVFVAKFV DKDGNPVKHARIDVDFINAKIDIKNDMYKGGNPDMPKVSKRTYTDDNGMFYFSAPRAGMY AIRGVESMDKANKVVHDTGLVVQFK >gi|224531368|gb|GG658184.1| GENE 62 61162 - 62085 956 307 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315918399|ref|ZP_07914639.1| ## NR: gi|315918399|ref|ZP_07914639.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 307 4 310 310 511 100.0 1e-143 MKKKKLILIMEYNYEEAVNEVLRNPETEYKALTVFYRMNLQNGLEFLKKLKRIFSLENII LMSDIEYLANDLEVGYVIELKQFYDFNLEQFLKVYESSVEHFENFFDFLESVSDVFHFSF HQYEKEKAWFSLLFGHGILIINDENYEKILQNYHKIKAHTSDLAFINLNEAGVEKNLKLL KMLGSDAQIAFGVTNSLKSKFSQWIDVIIYQRSPYYERNIQNFISQIFSFNSWEKALALL QNFFTIEEKSFEADLYEEEEDVLKVPKRFFLKIENKIEFMEKAENVFYCSKDKKEHYRLE KDKDFIG >gi|224531368|gb|GG658184.1| GENE 63 62095 - 62640 779 181 aa, chain - ## HITS:1 COG:no KEGG:FN0212 NR:ns ## KEGG: FN0212 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 181 1 180 180 163 52.0 3e-39 MTDFEKINFMIETIEENRIPEGKTFNEFSMEFFQEVKLLPLSKYLRSIGKNKRLPKIMNM RKAGEVLTDTYADSDLVSFVKRKSKQGQIPELDYQSIMLLRRIDVKDNWEKIFRFFRGSE TVAEINSTTRPELLPQEIEMLENFLKEKLHLSEKELDWLLEKFRKILTEKELLRAIRKLA K >gi|224531368|gb|GG658184.1| GENE 64 62795 - 63796 1076 333 aa, chain + ## HITS:1 COG:FN0837 KEGG:ns NR:ns ## COG: FN0837 COG0582 # Protein_GI_number: 19704172 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Fusobacterium nucleatum # 1 323 1 323 328 345 58.0 5e-95 MDIIKTKEQDLVLPRRKKRAQEGRKNFFEIYKSPKTLQDYLFYLKDFLSFVYDGDGSFQQ EEILPLMKGIEKEDVEQYIAHLLQERNMKKTSVNKVISAMKSLYKELEQYQVENPFRYVK LFKTTRNLDNILKISSNDIKKIIEQFQVKNEKDYRNLMILYTLYYTGMRSDELLHMEFRH LMNREGSYFLKLEKTKSGREQYKPLHPALMEKLQEYKKEMKALYQLEEEDLQNHFVFCSH FDKNKALSYRALYDLIKSLGLSIEKEMSPHNIRHAIATELSLNGADLVEIRDFLGHADTK VTEVYINAKSILEKRVLNKIPDIMEEKNSSSSK >gi|224531368|gb|GG658184.1| GENE 65 63762 - 64022 265 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467273|ref|ZP_05631584.1| ## NR: gi|257467273|ref|ZP_05631584.1| hypothetical protein FgonA2_07501 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 86 1 86 86 134 100.0 2e-30 MLQMLAPLLMGTLGKQKREQNLDANRLDSFTSTLAGNFLGENTNTSNMMNLVTNMLYTNN DGSIVDDVLKMDSSLFISKRSYFFLP >gi|224531368|gb|GG658184.1| GENE 66 64108 - 64821 734 237 aa, chain - ## HITS:1 COG:CAC3233 KEGG:ns NR:ns ## COG: CAC3233 COG2045 # Protein_GI_number: 15896479 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Phosphosulfolactate phosphohydrolase and related enzymes # Organism: Clostridium acetobutylicum # 1 225 1 229 235 162 39.0 5e-40 MKIDVFLTAEEVKQKEISNSNVIVIDVLRATSVMVTAIAHGVSKIYPYESIEEVREASLT SSCCILCGERKGLKIEGFDYGNSPLEYQTEKIKNREMFMTTTNGTRALSNIKGKNNKIWI ASFLNISTVLSFLEKEEKDCIIVCAGTENHFSLDDALCAGMLVEKLENYEKTDIALALEQ IAKTSINVKESLKNTKHYRYLKSIGLEKDLEFCCHLNTYPLLLEYKRETNSIFAVTK >gi|224531368|gb|GG658184.1| GENE 67 64835 - 65551 1141 238 aa, chain - ## HITS:1 COG:FN0800 KEGG:ns NR:ns ## COG: FN0800 COG0834 # Protein_GI_number: 19704135 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Fusobacterium nucleatum # 16 238 7 230 230 264 65.0 1e-70 MKIMKYVGIGMGMMLLSMVAFGKTLYVGTNAEFAPFEYLEKGKVTGFDMELMNALAKEMK MDVKIENMAFDGLLPALQMKKVDVVIAGMTETPERKKAVSFTKPYFKAKQVIITKKGKDI KDFKELSGKKVGVMLGFTGDAVVSDIKGAKVQRFDTTYSAVMALEKGKVDAVVADSEPAK KYIASYKDLAIASAKAEEEDYAIAVRKNDKALLDNLNKALVKVKSNGTYDALLKKYFK >gi|224531368|gb|GG658184.1| GENE 68 65573 - 66301 590 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 231 46 1e-59 MIRVKHLDKNFGNLKVLKDISVEIEKGDIVAIIGPSGSGKSTFLRCINRLEEPSAGHIFI DEEDLMDENVDINQIRAKVGMVFQHFNLFPHMTVLENLTLAPIQIKNIAQKEAEEKAKLL LNKVGLLDKASSYPNQLSGGQKQRIAIARALAMEPELILFDEPTSALDPEMIKEVLDVMR DLAKEGMTMMIVTHEMGFAKNVANRVLFMDQGTILEDCHPKELFENPKSDRVKDFLNKVL NK >gi|224531368|gb|GG658184.1| GENE 69 66294 - 66968 989 224 aa, chain - ## HITS:1 COG:FN0802 KEGG:ns NR:ns ## COG: FN0802 COG0765 # Protein_GI_number: 19704137 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 1 224 1 236 236 285 75.0 5e-77 MEYLQTLQEIFLAEDRYLYILNGLGFSVGVTLFAAILGVLLGILLALMKLSNSKILSKIA LVYIDIVRGTPAVVQLMILANIIFVGALRETPILIVAGIAFGMNSGAYVAEIIRAGIEGL EKGQTEAGRALGLSYAQTMKFVIIPQAVKKILPALVSEFITLLKETSIVGFIGGVDLLRS ANIITSQTYRGVEPLLAVGIIYLILTTIFTVLMRKVEKGLKVSD >gi|224531368|gb|GG658184.1| GENE 70 67258 - 68241 1627 327 aa, chain - ## HITS:1 COG:FN0776 KEGG:ns NR:ns ## COG: FN0776 COG2502 # Protein_GI_number: 19704111 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Fusobacterium nucleatum # 1 327 1 327 327 493 74.0 1e-139 MEYKSKLGLLDTEIAIKKVKDFFEKELSLELSLIRVSAPIFVRPESGLNDNLNGIERPVS FDVKAGDIAEIVHSLAKWKRMALYRYGIETYNGLYTDMNAIRRDEDPDAIHSYYVDQWDW EKIIKKEDRNVETLKHVVKGIYTVLRKTERYLRTQYPTLSKKLPEEITFVTTQELEDKYP NLTPKEREHAIAKEHKAVFLMKIGGTLASGEKHDGRAPDYDDWELNGDILVWYEPLQIGL ELSSMGIRVDEESLERQLKIAGLEERKVFPFHQMVLNRELPYSIGGGIGQSRICMFFLEK IHIGEVQASIWPEEVRKECEEKNIILL >gi|224531368|gb|GG658184.1| GENE 71 69570 - 71114 1924 514 aa, chain + ## HITS:1 COG:TM0116 KEGG:ns NR:ns ## COG: TM0116 COG1070 # Protein_GI_number: 15642891 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 5 512 4 489 492 160 24.0 4e-39 MEKYYIGFDAGTQSVKVAIYNLQLECVAEQNYPTHLYYPKAGWVEMNVNEYLVAVKQGIK DCVEQMKQKDLDVSKVRAIFGDGIICGIVGVNEEGEAITPYINYLDSRCQEDVENLSAQN LTIWAEETGNAVPNCMFPAMIARWILKNNLAFQKEGKKFMHNAPYVLSHLAGLNSKDAFI DWGTMSGWGLGFEVYKKAWSDKQLEILEIKREYMPKIVKPWKIIGSLTKEIAEFTGLPEG VSICAGAGDTMQSMLGCGLIDKNMAADVAGTCAMFCVSTDGIKPELSTRESGLIFNSGTL ENTYFYWGFIRTGGLALRWYRDNLCKQEGVDEYFDILSQEAEKIPVGSNGVLFLPYLTGG NTEYVNACGCFLNMTMDTNQATLWKSVLEAIGYDYIGVTDTYRKAGVNLDQITITEGGSR SELWNQIKSDMLDAKVKTLQKAGGALITNILTAAYAVGDISNLKEALTSLLKIKKVYSPS EKNTKYYRNIYTLRKDLIQNKMQKTFEILKEIRE >gi|224531368|gb|GG658184.1| GENE 72 71296 - 71829 798 177 aa, chain + ## HITS:1 COG:FN2119 KEGG:ns NR:ns ## COG: FN2119 COG2849 # Protein_GI_number: 19705409 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 20 171 162 311 338 76 30.0 3e-14 MKERQIEFFDSIEKSDIIYYKQDSHPFDGLVFYRYPTGEVRERIRYENGIKNGLSLSYYP NGIVSQSSEYREGLLDGDTVFYYKSGKMKEFIHFSANEFEGEWIIYYENGELKSRAFFEK GRLNGTKITYYENGKVREILNFQNNLLHGKNIQYYPSGEIQWVHHYSYGELIDDGEF >gi|224531368|gb|GG658184.1| GENE 73 71926 - 73362 1676 478 aa, chain + ## HITS:1 COG:FN0517 KEGG:ns NR:ns ## COG: FN0517 COG1538 # Protein_GI_number: 19703852 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Fusobacterium nucleatum # 20 465 1 449 449 298 40.0 2e-80 MKRKWNLFFCLLFLTSCSSVNKEASENSLLQELQNKEKETQEILKEQKLSLEEAIRLAKE RNLELKMKELEKEIASIDKRIAFGNFLPKISAFYTRSFWEEPLSAQIDLPSSLGKFPMIG PLLPKEIHGRLLDQNYSVYGMQASMPIFAPATWFLYSARKKGEDIHSLVFDLTEKMITVK VIQQYYWILALKSEEKQLQASLQSAEQLLHNTKIALETQSILDWQYQKAEVYYKQKKLAL EENRRDLKIANMNLLLTLNLSPFSEIYLEDANLSTKKPLLNYEEVVYQSLLHSQALEIQN KMIEVEKEKVKISLSRFLPIVGLQGFYGEHSFSLLTSPHYLFGILGGVFSVFNGFQDISA YQKAKIEQQKAIIKREQLMLQTIAETTNVYQKLQSSLEEQEIAQGNLKAENGKFYQKEME KKVGMIDELSYLQALQSYEEARSLNAKAEYQSAVLQEILDMLMEQGRFVKIREGEKNE >gi|224531368|gb|GG658184.1| GENE 74 73355 - 74455 1335 366 aa, chain + ## HITS:1 COG:FN0516 KEGG:ns NR:ns ## COG: FN0516 COG0845 # Protein_GI_number: 19703851 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Fusobacterium nucleatum # 17 357 17 356 357 251 42.0 2e-66 MNKKWICIFMISFLLIACEKNEEKEKIRPVKIQEIGVNLSQEILSEYPSSIQAKQEAMLS FQVPGKIEKILVSLGDRVKKGQVLAKLEEQDYHLNLEANAQKYEASKAVAENAGLQFERV KTLYQNNAIPKKDYDMALAQYKSAIAAEKANQAGLSHAANEVYYGDLIAPYDGIVSKKMT EAGMVVAAGTPILSISSEDVSELTIQVPAKELEKIKEAQRYYFIVEEDKSKTYPLTLKTI SFTPDMTKSTYPIVFQLERDNIKNLYAGMSGTVVVALKKEENSKILLPISAIFEENGSFV YLYGKENKAEKREVKLGDLQGNGEIQIISGLKTGDKVIIAGVSSIHEGQVIKALPPTTDT NVGNLL >gi|224531368|gb|GG658184.1| GENE 75 74468 - 77533 3468 1021 aa, chain + ## HITS:1 COG:FN0515 KEGG:ns NR:ns ## COG: FN0515 COG0841 # Protein_GI_number: 19703850 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Fusobacterium nucleatum # 1 1021 3 1021 1022 1137 55.0 0 MVEYFLKNRIVTLVLTLLILLGGILSYFKLGKLEDPEFKVKEALVVTLYPGASPHQVELE VTDKLEQKIREMPHVEYIDSTSKAGYSEIRVKIEESIPSEEVEQYWDILRKKVADSKLYL PSTAISPIVLDDYGDVYGMFFAITSEGYSKEELNRYSKYIKRELESIQGVSKAVLYGKAD SVVEIVIDRSKMANLGINEKMIYTAMLQQNIPTPAHNIEQGTRYLRFQLHSNFQSIEDIE NLVIFSKPDLLKMLTGAGGDTLFLKDIAEIKKSSSNPSSNMMRFCGKMSIGLQLSPESGT NVVKTGEKIDKRLEEISSSLPIGIEVHKIYYQPELVSNAISQFVYNLIASVAVVIGVLLF TMGMRSGLIIGSGLVLSILGTFIYMLFVKMDLQRVSLGAFIIAMGMLVDNSIVIVDGTLN ALENKMERYEAVTLPTKKIALPLFGATFVAIAAFLPMYLMKSSIGEYISSLFWVIAISLG LSWIFSMTQTPLLCYLYLNDLGQQKVSKKRRKFYWILRKWMNKILHFRKVSLLILLGSFC FIILLSFGISTSFFPNSDKKGFVLNIWTPEGSSLEYTNQVSKILEKEISKKKEVKNYTTF VGASPSRYYVATIPELPTTSLAQIIVNVDKLSTIEDLEKSLTNFTWENLPDVQIQVKRYA NGIPTKYPLQLRITGSDPKILRDLARKVEKELYEIPGAKNVNVDWKEKVLTMVPNLDEQK ERKHAVSTFDIASALNRLGNGNQVGVFHEGVEDLPIVIREKSGGQQVNSNNLEQLPIFGV GMQSLPLGEFIKGTDLVWEDPMILRHNGKRAIQVQADVETGIQVEKIRSILAEKIKDISL PEGYSLEWNGEYYEQNKNIAKVLSYVPIQFMIMFVACLLLFATLTDPFIIFVVLPLSLIG IVPGLLLTGRSFGFMAIIGMVSLSGMMIKNSIVLLDEIRYQKLHTDKTEFDAVVDASLSR VRAVSLAAGTTIFGMFPLMFDPLYGEMAITIIFGLAASTILTLFVVPLLYVSIHKIYKNK K >gi|224531368|gb|GG658184.1| GENE 76 77544 - 78731 1341 395 aa, chain + ## HITS:1 COG:YPO3006 KEGG:ns NR:ns ## COG: YPO3006 COG1168 # Protein_GI_number: 16123185 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Yersinia pestis # 11 393 10 392 393 299 37.0 7e-81 MMNDVFLKHWDRSQNLSAKWDELEAKFGDKDLYPLWIADMDFPAPKEVIDAVVEKAKQGI YGYTARPSSYYQALCDWTEKRFHYSLNPKYLIHSPGGVTSFTLALEVLTEKGDAVLVTPP VYPGFFRTITGTGRKLVTSPMLETSMGNFEINWEEFEEKIIQEKVKVFIFCNPHNPIGKV YKEEELKKIANICLKHNVRIIEDQMWRDLTFGEAKTISLLQLGEEVRENTVACLSATKTF NLAGLHASFLYVSNEKIRLTLIDKIEVLDIHRNNALSIVAMETAFQKGEAWLQSALEYLE ENLKMAVDFIHKELPEIKAYMPESTYTLWVNFSHYSLQGEEITKHLAKYGKIATGNGVPY GQGGETCQRINLACSREVLLKSLEGLKVAVEAMGE >gi|224531368|gb|GG658184.1| GENE 77 78738 - 79595 915 285 aa, chain + ## HITS:1 COG:FN0635 KEGG:ns NR:ns ## COG: FN0635 COG0130 # Protein_GI_number: 19703970 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Fusobacterium nucleatum # 1 285 1 287 287 285 55.0 6e-77 MDGIIIINKEKGMSSFDVIRSLRKLLQERKIGHTGTLDPLATGVLILCLGKATRLSQEIE AQEKVYEAEMEFGYQTDTYDLEGEIVATSPKKEVKREEFEEVLSHWKGKISQIPPMYSAI KIQGKKLYELARKGIEIKREGREVEIFGIDILDFEGKKAKIRTKVSKGTYIRSLIYDIGE ELGSFATMTALNRIQVGEHHLKNSYTISEIHDKINVCDFSFCIPVEEYFSFPKIQLEGEK NLILFRNGNTVIFKEKDGKYRVYQNGLFLGLGKIEKQRLKGYKYF >gi|224531368|gb|GG658184.1| GENE 78 79613 - 81424 2405 603 aa, chain + ## HITS:1 COG:FN0634 KEGG:ns NR:ns ## COG: FN0634 COG1217 # Protein_GI_number: 19703969 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Fusobacterium nucleatum # 1 601 1 601 605 1072 88.0 0 MKIKNIAIIAHVDHGKTTLVDCLLRQGGAFGSHELEKVEERIMDSDDIEKERGITIFSKN ASVRYKDYKINIVDTPGHADFGGEVQRIMKMVDSVLLLVDAFEGPMPQTKYVLKKALEQG HRPIVVVNKIDKPNSRPEEVLYMIYDLFIELNANDYQLEFPVVYASSKAGFAKKELTDEE KDMQPLFDTILEFVEDPDGDKNHPTQFLITNTEYDNYVGKLAVGRIHNGMLRRNQEVMIM KRDGAQVKGKVSVLYGYEGLRRVELQEAEAGDIVCIAGMENIEIGETLADVNNPVALPVI DIDEPTLAMTFMVNDSPFVGKDGKYVTSRHIWDRLQKEVQNNVSMRVEATDTPDAFVVKG RGELQLSILLENMRREGFEVQVSKPRVLMKEIDGVKMEPMEMALIDVDDSYTGVVIEKMG VRKAEMIAMTPGQDGYTRLEFKVPARGLIGFRNEFLTVTKGTGILNHSFFEFEAFKGEIP TRNKGVLIATEPGVTVPYALNNLQDRGTLFLDPGIPVYEGMIVGEHNRENDLVVNVCKTK KLTNMRAAGSDDAVQLATPRKFSLEQALDYIAEDELVEVTPLNIRLRKKILKEGERRRNR SDV >gi|224531368|gb|GG658184.1| GENE 79 81417 - 82172 692 251 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_0446 NR:ns ## KEGG: Ilyop_0446 # Name: not_defined # Def: ankyrin # Organism: I.polytropus # Pathway: not_defined # 93 247 116 272 299 78 32.0 2e-13 MSKKSFLILSCILIILNMGCRRQISNQKIDYPMKKIESAIATNNVLLLKDFLLHTENRKE FIYMALDYNSLDVLEFLLHFPKLEEGVANSPYFYVQGKEAFQLLQKHSYDVNVKNYEGKS LAEYYYDTKGIEFFKYFLEEAAKLDLSKENSLIFKAIASEDIELIHLLIKRKADFTVLDK KGNYPIYYAKTTAIISRLLDFPYDLQHKNFRKENVLGEVYLRLQKSQKRDLLRKCARLGI DSNYSSYQKEQ >gi|224531368|gb|GG658184.1| GENE 80 82214 - 83200 771 328 aa, chain - ## HITS:1 COG:FN0751 KEGG:ns NR:ns ## COG: FN0751 COG0252 # Protein_GI_number: 19704086 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Fusobacterium nucleatum # 1 326 1 333 336 374 54.0 1e-103 MKNRILLINTGGTIGMIGEPLQPSKDWKEITKNHPILWDFPVDYYQMENLVDSSDMNPDI WLEIAKILKKEYENYDGFVILHGTDTMSYTASALSFLCKNLSKPIILTGSQVPLAKPRSD ALQNLITAIQIASQYKIPEVCILFRDNLLRGNRSKKIDATNYFGFSSPNYPVLGEIGAEI KISWDKILSFPKEKFQVEENLCSDIIVLEIFPGMNIEFYNTILNSSIKGIILKTFGNGNA PTSLCFLEFLKELQKKKIPVINVTQCIRGSVEHGKYAASHNLISLGVISSKDMTTEASIT KLMYLLGKNYSYEEIQEAFQKNLAGEIS >gi|224531368|gb|GG658184.1| GENE 81 83299 - 84033 972 244 aa, chain + ## HITS:1 COG:FN1142 KEGG:ns NR:ns ## COG: FN1142 COG1242 # Protein_GI_number: 19704477 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Fusobacterium nucleatum # 3 244 4 245 304 331 61.0 1e-90 MGRFYSLNDYFRDTFGEKIYKVSLDGGFTCPNRDGKVGFGGCIFCSEEGSGEFSGDRHKK IYQQIEDQLQLISKKFPSGKVIAYFQNFTNTYADISYLKKVYEEALSHPRVMGLAIATRP DCLGEDVLQLLDEMNQKTFLWIELGLQTVNEEVATFFHRGYPLSVYTKACDDLKKYRIRF VTHILLGLPKEKEEDGLKTALYAQECGTWGIKIHCLYVQKNTYLEQLYKNHEIKIQKKDE FVKK >gi|224531368|gb|GG658184.1| GENE 82 84208 - 85059 1070 283 aa, chain + ## HITS:1 COG:PM1577 KEGG:ns NR:ns ## COG: PM1577 COG1737 # Protein_GI_number: 15603442 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 1 278 1 279 286 168 33.0 1e-41 MSVILKLKMMRENFSKMEQKIADYILKHPEEVKQLTTYQVAKVCKTSQASIVRFAKKMGF SGYPDFKLSLSQDMGVLSAKKEVSIIDSEIDSNDSLQEVCQKVARENMRAIEDTYSLLDF KELEKAVKALGKAKKIMILGAGFSGVVARDLSYKLLELGKDVVFESDFHMQFSLLTTMTS MDILFVISYSGKTKEVYEITKKAKERGIQIITLTTIAGNPIRDLGDITLNTVELNKNFRA TALSPRISQMTVIDMLYVKLILENKEMEENILEAMEIVKNFKL >gi|224531368|gb|GG658184.1| GENE 83 85069 - 85896 1153 275 aa, chain + ## HITS:1 COG:FN1143 KEGG:ns NR:ns ## COG: FN1143 COG0363 # Protein_GI_number: 19704478 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Fusobacterium nucleatum # 1 273 1 274 274 400 70.0 1e-111 MRVIITEKNVVDWAAVYVARKIKEFQPTKERPFVLGLPTGGTPLGMYKRLIQFYQDGLLS FENVVTFNMDEYVGLEANNEQSYHYYMHHNFFDHIDIPKENINILNGMTEDYEKECREYE EKIKKVGGIHLFLGGVGEDGHIAFNEPGSSLSSRTRDKELTTDTILANARFFDNDITKVP KLALTVGVGTILDAKEVLIMVNGPKKARALHKGIEEGVNHLWTISALQLHEKGIIVTDEE ACNELMVGTYRYYKDIEKDNLDTEQLIQDFYREYR >gi|224531368|gb|GG658184.1| GENE 84 86547 - 86777 283 76 aa, chain - ## HITS:1 COG:no KEGG:Bacsa_0384 NR:ns ## KEGG: Bacsa_0384 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: B.salanitronis # Pathway: not_defined # 5 66 7 68 180 75 53.0 7e-13 MVLETERLYLRNWTEEDAEALFYCAKDNRVGPMAGWLPHQSVEESLHIIQTLLLLPYTFA MILYYTTFLYILFSYF >gi|224531368|gb|GG658184.1| GENE 85 86920 - 87282 438 120 aa, chain + ## HITS:1 COG:SMc01274 KEGG:ns NR:ns ## COG: SMc01274 COG0239 # Protein_GI_number: 15965143 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Sinorhizobium meliloti # 1 114 1 115 125 79 41.0 2e-15 MSEVFLVGLGGAIGSILRYGVGQIFQRTESGFPLGTLCINVLGSLCIAMISSLAIKYGYE NSRLTLLLKTGICGGFTTFSTFSLESMNLLKEGNTIFFFSYICCTVLFSFLAIYIVERVI >gi|224531368|gb|GG658184.1| GENE 86 87766 - 88293 743 175 aa, chain + ## HITS:1 COG:CAC3555 KEGG:ns NR:ns ## COG: CAC3555 COG0778 # Protein_GI_number: 15896791 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 3 175 1 172 174 111 34.0 5e-25 MDLLEIMKRRRSVRQYTEEAIPKESIEKILQAGLLSASGKNARPWEFIVVQEKENLKYLS ECRVGSAKMLEKANCAIIVLADSEKTPIWIEDASIAMTNMHLMADYLGVGSCWIQGRGRM ASDDITSTEDYLRNKFLFPQQYKLEAILSLGIPANHPIPRRLEDLELEKIHYETF >gi|224531368|gb|GG658184.1| GENE 87 88454 - 89242 675 262 aa, chain + ## HITS:1 COG:no KEGG:FN1045 NR:ns ## KEGG: FN1045 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 260 1 267 269 246 52.0 1e-63 MKEYAALMIDLKKSKSYSTESRNKLQQKILETIQKLNTLFSTTITKEVEFSAEDEIQGLF SSPMAAYLYLRFFQLLTFPLELHAGIGLGSWDIVIENSSSTAQDGPVYHHARKAIEESKK NLEYFSLFYSERNEDRVINSLINAYEVLLKKQSKYQAELHLMTEFLYPISIENVLSENAM IEFLKDSEQSNWKSEIIDGREVEELFYIKLGKRRGLATQLSELLESSRQSIEKSLKVGNI YEMRNLVFAILEILKNMKGEKE >gi|224531368|gb|GG658184.1| GENE 88 89406 - 89720 319 104 aa, chain + ## HITS:1 COG:no KEGG:FN1044 NR:ns ## KEGG: FN1044 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 100 138 239 242 86 53.0 3e-16 MFLCILIPSSIFIKKLFLLLPRSTEKEKANVKAGSMIGQLERILIVILLLQNQYEAIGFV LVAKSIARFKQLDDKEFAEKCLVGTLPSLLLSLVITLVVKKCFL >gi|224531368|gb|GG658184.1| GENE 89 89758 - 90705 1394 315 aa, chain - ## HITS:1 COG:AF0807 KEGG:ns NR:ns ## COG: AF0807 COG1304 # Protein_GI_number: 11498413 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Archaeoglobus fulgidus # 30 306 93 357 366 120 32.0 3e-27 MNQEIKSPWPGPKGLIPVTSGRAEDANVYNRRYLDTIHIEMRVLDSIEPSLSTEIFGETF DSPIMMPAFSHLNKVGVDKKKPMLHYAFAAKELNMLNWVGMEPNDEFEEILEAGARTVRI IKPFMDHSIILEQIAFAEKHNAIAVGIDIDHVPGSNGKYDVVDGIPLGPVTTEDLKSYVN STSLPFVAKGVLSVQDALKAKEARVKAIVISHHHGRIPFGIAPLQVLPRIKEALKGSGIF IFVDGSMESGYDVYKALALGADAVSVGRAILAPLLKEGKEGVIKKVKKMREELSELMMYT GIEDTKSFDPSVLYY >gi|224531368|gb|GG658184.1| GENE 90 90721 - 91650 891 309 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0659_A6323 NR:ns ## KEGG: HMPREF0659_A6323 # Name: not_defined # Def: transporter, auxin efflux carrier (AEC) family protein # Organism: P.melaninogenica # Pathway: not_defined # 4 307 6 309 311 319 55.0 1e-85 MQTVLFPVFFMLFLGYLARKKEWITTQQNEGGKKIVFNILFPILVFHVLAQSELKKEFLI QILFLFFAWSFVFLVGKAMTSFTGKRFSNISPYLLLTCEGGNVALPLYISLVGAAHAVNI VTFDVAGILINFGLVPILVTKQSSSELNWKSLLKKIFTSSFILAVLIGILFNVTGIYSYL MNSTFQDIYLSTIDIVLKPITGIILFTLGYELKLNRAMLQPLWRLSLLRLLTCSGIIGTF FLFFPNLMKEEVFSIAVFLYFMCPTGFPVPLQIQALVKKEEEEHFMSAFISVFLMIALAV YTIITLVWK >gi|224531368|gb|GG658184.1| GENE 91 91870 - 94347 2313 825 aa, chain + ## HITS:1 COG:FN1122_1 KEGG:ns NR:ns ## COG: FN1122_1 COG1022 # Protein_GI_number: 19704457 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Fusobacterium nucleatum # 1 598 1 600 600 590 52.0 1e-168 MFFLKDYQKVGIYYEGQEITYRDIIIKAKQLGEHHKIEEHSKSILFSENRPEFLYAFLGI WNRNATCVCIDASFDEEEFLYYVNDSEAERIFTSKTNEQVARKTVEKSGRDVEIIVLEEE VWEEKEYRPEELVLMAPEKETVALMLYTSGTTGNPKGVMLTFDNILYNIESLDEYNMFLE SDVTLALLPMHHIFPLLGSGVIPLSHGASIIFLKELSSQAMMEALQKYQVTMMIGVPKLW EMLHKKIMEEIKANKIAHLLFKVCESLQSKSLSKIIFGKLHQKLGGKLRYFVSGGSKLDE QVAKDFFTLGITICEGYGMTETAPMISFNPLSEAKPGTAGKILRNLDLLIAEDGEILVKG RNVMKGYYKREEATKETIDEKGYLHTGDLGEIRNGYLYITGRKKEMIVLSNGKNINPIDI EFWIQGKTNLIQEIVVLEWKGLLTAAIYPNFQAIRDEKIVNIEETLKWDVIDKYNKQAPD YRKVLDTIIVPEEFPKTKIGKIRRFMIPAVLENIGKKEIISEEPSSEEYAIIKEYLSLAK ARTVVPQAHLELDLGMDSLDMIEFISFLGSRFGMVVQNETILENSTVESISAYVEKHRGE DKIEDVNWKEILSKETKVDLPYYGIFARIGKILNYLLFWSYFRIDIKGREYLDEKPTIYV GNHQSFLDICLITRAFPFAIMKNCYFMAKVVHFKSFLMKFFASQANVVTLDINDNITEVL QTMAKVLREGKSILIFPEGVRTRDGKLNSFKKSFAILAKELNVEVQPFVIQGAYELFPTS ARMPKMGKVQLEILPKFSPKAMSYEEITEEARKRISEKLNHQKHD >gi|224531368|gb|GG658184.1| GENE 92 94325 - 94702 540 125 aa, chain - ## HITS:1 COG:no KEGG:Ilyop_2182 NR:ns ## KEGG: Ilyop_2182 # Name: not_defined # Def: GrdX protein # Organism: I.polytropus # Pathway: not_defined # 1 118 1 120 126 85 41.0 6e-16 MKYIIITNNRKVANLYQETNQVKFYEFKDFLHILDKVQEQVYEGRKLLSDPIISHLEDAK NPFKSVIVSKECFEDNQEFKRIIDLAVKIATQLERPHDNYSEEELEAFRFIDLKLLQESS HAFDD >gi|224531368|gb|GG658184.1| GENE 93 94845 - 95258 624 137 aa, chain - ## HITS:1 COG:no KEGG:FN0351 NR:ns ## KEGG: FN0351 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 9 132 8 138 144 68 32.0 8e-11 MSTMILIPISIWIIGIAVMFFMNSRNKNAVGNYLSQYPNAAKIYVSHKGVIVQSQTQILA VNDETPAVFTEMKGYGVYCKPGVNILTVEHSSTRPGVLYKTVTKSTGGVKIEVDIKAEAE YIITFDKETQNFKIDLK >gi|224531368|gb|GG658184.1| GENE 94 95264 - 95692 512 142 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257451896|ref|ZP_05617195.1| ## NR: gi|257451896|ref|ZP_05617195.1| hypothetical protein F3_02446 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_07651 [Fusobacterium gonidiaformans ATCC 25563] # 1 142 1 142 142 234 100.0 1e-60 MTTYKRKITNLIVGLLSAPAAAFFLLAILRYFLSPLIMLIISGIAFILILYLTIFSDNIK FVIDEEDKTMIYYENGKVVKEYDLKNASLSYNMKFGHSAVIDLIINGEKIDCEPLGERQF EKMYHQLEKLVGVEPIKLKVGE >gi|224531368|gb|GG658184.1| GENE 95 95708 - 96367 509 219 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257451895|ref|ZP_05617194.1| ## NR: gi|257451895|ref|ZP_05617194.1| hypothetical protein F3_02441 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_07656 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 219 1 219 219 384 100.0 1e-105 MKLLKEIALTDIIEKENGIFSLLKQLENRKRMSYLFHFFSIGFYLFLLFSRKPHTRPSFL LQSFIYVLVMLISYLNAAIFYLFWKKESYYLEKENFDDMRAAKIQEEMRDYLLADEKVII GKKYIFSLKRNGLAVIPKEDILEVNLRILSKADVYLETRGGQSRFPIHADILASLYEAKS LAVLKRKFDSEEEKDLYKKKHGLGQGQWEFLKHLILTKE >gi|224531368|gb|GG658184.1| GENE 96 96393 - 97085 342 230 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467305|ref|ZP_05631616.1| ## NR: gi|257467305|ref|ZP_05631616.1| hypothetical protein FgonA2_07661 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 230 1 230 230 402 100.0 1e-110 MKLTNTFQRDSLLYQEGYILSLVKDVEKTWKLNLLPFFIVFFVFGTATIYFRFFANYYSR DLYVFPLGFLGIFLLLFLVIIFSEKDCYLLSKNNLDESTLRNLRQEMIDCLFFDNNVIIG RKDIFILAKNGIRLLPKEEIEDLDILCVYGRASLKWLNIILTTKQGKITFSIADTWKNSR LVNAYQYKSIFLPLTILRRKSKEDLSIYQVNGLPKGMKGSPLKDLILKKY >gi|224531368|gb|GG658184.1| GENE 97 97221 - 98480 1528 419 aa, chain + ## HITS:1 COG:YPO0011 KEGG:ns NR:ns ## COG: YPO0011 COG3328 # Protein_GI_number: 16120364 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 31 416 17 398 402 338 41.0 9e-93 MEKKKKDVYKVKPLTEGKKNIIASLLQEYDIQSAQDIQVALRDLLGGTIQSMLEAEMEEH LGYENYERTEDRMEGDNYRNGTKKKKIRSQYGEFEVEVPQDRNSSFDPKIVKKRQKDISE IDQKIINMYARGLTTRQISQQIEELYGFECSESFISNVTDKILQDIEDWQNRPLDAIYPI LFIDAVHFSVREDNRVKKIAAYVILGITIEGKKEVISLEIGENESSKYWLGILNALKNRG VKDIMVLCADGLSGMKEAIQTAFPETEYQRCIVHQVRNTLKHVSYKDMKAFAADLKQIYL APTEEKGYEALQRVKEKWEEKYPYSMKSWEQNWDILSPIFKFSMDVRKVIYTTNAIESLN STYKKLNRQRSIFPNEKALLKTLYLATLQATKKWTMPLRNWGKVYGEFSIMYEERFEKN >gi|224531368|gb|GG658184.1| GENE 98 99089 - 99175 72 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRTSIPEEIRLRQRIVEYAIKHNNNANS >gi|224531368|gb|GG658184.1| GENE 99 99537 - 99866 132 109 aa, chain + ## HITS:1 COG:no KEGG:Fisuc_2040 NR:ns ## KEGG: Fisuc_2040 # Name: not_defined # Def: ATPase (AAA+ superfamily)-like protein # Organism: F.succinogenes # Pathway: not_defined # 24 91 355 422 444 77 55.0 2e-13 MDFEEFSWATKNNSIEIIKKFYDSGKVLYYHTWKKKNSTHYYEIDFLLSNGIKVSAIEVK SAGVAKHNSLDAFSEKYSSQLEKAILLSQKDKTFTNGIYYYPIYMGILF >gi|224531368|gb|GG658184.1| GENE 100 99904 - 100659 332 251 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451884|ref|ZP_05617183.1| ## NR: gi|257451884|ref|ZP_05617183.1| hypothetical protein F3_02386 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_07676 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 251 1 251 251 465 100.0 1e-129 MERKGKFANWTMKDWCIEIVFIFIGISFLFAAFHDIRLSWYFRGVLFLICGILLLFLVLI PFYSKQLPVRERKASPMQISLPKSKESLIKLVKLLTENDETMITMISECLENPEYFLQKI ETLKKEENEKDWEEKFQDLYEEYKEYKNYAKDTKELFFQGAIILLSNHHFLARYDWKADK ETFINLMEDLNIVKTKKLTWKEEELSETGDVELWCSQLAELWKEAGYHTLLLDNDSDEYL VGIEKMECRRR >gi|224531368|gb|GG658184.1| GENE 101 100662 - 101549 526 295 aa, chain + ## HITS:1 COG:no KEGG:FN1938 NR:ns ## KEGG: FN1938 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 3 148 1 152 155 119 42.0 2e-25 MGIYFIACILIILGIIFISLGKGSAAEENRIKKLFSDEKNTQKVEGFLEIIHLDKTRYLS ECEAKITFMKTNGKKFSSFESDFKFLWKWNGKGRVPITITYDKKNPSNYSIKELKQIQSS QNSKLVLPFIGILWIVLAIFIITSEIRLSFAENTKYYPYQNQKYHFEVDLPTRIPEFGLE ATSEEGVALTAYHDSINIAIYGYGIPDFTALKKEYQKQIREKEKTLGYYILGKDFFIVSY QEKNKIIYSKYLLSKSERTSVALLFEYSSEHKDLMDSIITDMTNSFHFYRETRRK >gi|224531368|gb|GG658184.1| GENE 102 101594 - 102469 756 291 aa, chain + ## HITS:1 COG:no KEGG:FN0721 NR:ns ## KEGG: FN0721 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 81 280 29 228 239 183 50.0 7e-45 MKTKKILFCILLFFLCACQGKEDTEKRTELHKEEIIEEKGLQEIEKVQKLKMTEEQKQKM SMEEAAIANKKREIQNLEIEKKLKKFVPRGWKILQFVTGDLNKDTLEDVAMVIEETDAEN FVKNDALGPEILNINPRELWILFQEKDGDYALETKNDIGLIPSEHDEECPTLADPLLNGE IFIENHLLKCQFHYWLSAGSWYASIVSYIFRYQKEHFELIGVDYYSYHRASGEEKESSYN LFTGKMKITTGGNISGEGKEKVEWKNKPCERKPTLEELMEDDYTILLIEES >gi|224531368|gb|GG658184.1| GENE 103 102603 - 103145 344 180 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257451881|ref|ZP_05617180.1| ## NR: gi|257451881|ref|ZP_05617180.1| hypothetical protein F3_02371 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_07691 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 180 1 180 180 316 100.0 5e-85 MKDIYENLPPAKLPMKYPGEITAMKRISGTQLSKERLFSLQDTKNHFEYDILDYWEKFEE ISACRLPLSPNKKAIILRTYYRRFPDEKHRREFFYLCLLNDDYRIIDSMQIYDNSIHVGK SKPPMREEQDFLIAKDDSCIATTHYYYLDTGKETFKTCDIYKLKEKEIFKEEKYISIQTK >gi|224531368|gb|GG658184.1| GENE 104 103255 - 103926 1163 223 aa, chain - ## HITS:1 COG:FN1252 KEGG:ns NR:ns ## COG: FN1252 COG3470 # Protein_GI_number: 19704587 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein probably involved in high-affinity Fe2+ transport # Organism: Fusobacterium nucleatum # 1 223 1 228 228 322 82.0 3e-88 MKNLKFLAMALLVLGLTACGEKKEEAAAPAENPAAAEATTEAAAPAEKPGESGFAEIPID ETVVGPYQVAAVYFQAVDMIPEGKQPSAAESDMHLEADIHLLPEAGVKYGFGEGEDIWPA YLTVNYKVMSEDGKKEITSGSFMPMNADDGPHYGINVKKGLIPIGKYKLQLEIKAPTDYL LHVDSETGVPAARDNGLAAAEEYFKTQNVEFDWTYTGEQLQNK >gi|224531368|gb|GG658184.1| GENE 105 103971 - 105278 1596 435 aa, chain - ## HITS:1 COG:FN1251 KEGG:ns NR:ns ## COG: FN1251 COG0672 # Protein_GI_number: 19704586 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Fusobacterium nucleatum # 8 420 1 414 433 642 80.0 0 MREYFKKIFMGICTFVLLFGLNYTVLEAAQKKKYDTWQDVAKDMNIEFQDAKKSIEAGDA DAAYKFMNNAYFNYYEVQGFEKNVMVNISAKRVNEIEAMFRKIKHTLKGNIEGNISELDK EIDLLAVKVYKDAMVLDGVISEEAPDSEGERLFKGEVASADASTIKWKSFGVSFGLLLRE GLEAILVIVAIIAYLVKTGNEKLCKQVYIGMGAAIVCSFLLAFLIDILLGGIGQELMEGI TMFLAVGVLFWVSNWILSRSEEQAWSRYIKSQVQKSIDEKSGRVLIFSAFLAVLREGAEL VLFYKAMLTGGQTDKLFAFYGFLAGVVALIIIYLIFRYSTVRLPLRPFFMFTSILLFLLC ISFMGKGVVELTEAGVISGSTVIPAMNGYQNTWLNIYDRAETLIPQLMLVIASVWMILGN LLKERKIKKEAEDSK >gi|224531368|gb|GG658184.1| GENE 106 105480 - 106910 1161 476 aa, chain + ## HITS:1 COG:FN1313 KEGG:ns NR:ns ## COG: FN1313 COG4166 # Protein_GI_number: 19704648 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 3 473 2 471 474 537 61.0 1e-152 MQKKLKYLLCLFSLFFFACSSEKQELEKREQILYTAMPKKEYHLIPNHYEKNDRALITQL WEGLTELKDGGVRFIEVTDIQHSQDFLTWTFHLRDDLTWSNGEKITAESYRKSWLDSLKN SPMIEEKYRMFVVKNAEKFSENKVSEKEVGIQVKDNVLEVTLNTPIPNFDEWVSNPIFYP LHPKNETLKEEDKIVNAAFKIASFQENKIILEKNEDYWDAVNTRLKKVDISLVEDGIMAY EMFPRYEIDIFGAPFYEIPFERLKQANTLPEKLVFPVMKYYYISIPNENKERFLEKSNVK LRELLYAVSDPEFMGRVILQNDSPSIFPHPHPSSEIITKSKEEFENLQQKENFVFSESPY VAKFDSNSLLEKKLLLSTLKEWISSFKFPIRVTSEKEAKTSFEIKNYLVGTNQKEDFYYY ISKKYGKNLKTEEEFLKDLPVIPLLQENTSLLLHSDIQGLSVAPSGDIYLKYIVII >gi|224531368|gb|GG658184.1| GENE 107 107000 - 107515 551 171 aa, chain - ## HITS:1 COG:no KEGG:BP951000_1074 NR:ns ## KEGG: BP951000_1074 # Name: not_defined # Def: hypothetical protein # Organism: B.pilosicoli # Pathway: not_defined # 20 168 95 243 244 139 50.0 3e-32 MPIGTHPVKICVVSEEVSGDRYACVKVEINKNKVMRYELAMVGNENLDEEMEKGDYFGFG VDCGMACIADVKTQEAFKKYWKQREREEEGIDPYNDLFDNLLEENFKTNPKYQRECGDWL NWRIPETEYNVLIFASGWGDGYYPCYFGYDVQGKISAVYIHFIDIQSDYID >gi|224531368|gb|GG658184.1| GENE 108 107519 - 108127 367 202 aa, chain - ## HITS:1 COG:no KEGG:Apar_1241 NR:ns ## KEGG: Apar_1241 # Name: not_defined # Def: hypothetical protein # Organism: A.parvulum # Pathway: not_defined # 1 118 1 118 119 77 31.0 4e-13 MTKEERAGKWFRKIANSEAISMEKKMEICNKVAKKMVILFIVIFLLEFVLLFMINDRVIF NHLSDFLNRLSEEKHTRNHYKGIALVGTLLCLPIMVLPIIVTLIFKKTWMKAEVYKVIDK IKRDKTFSPNNEPVSCMNEWMGKWEGIKENLDCQIDLDSYFTKKQIGRGILNILDIGTVY FPTGRIFACDPMIELEDAKPYI >gi|224531368|gb|GG658184.1| GENE 109 108160 - 108843 261 227 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 215 1 215 245 105 33 1e-21 MLEIKNISKSYMRASQSFYAVNNVNLNIEKGDFIHIIGRSGSGKSTLLNILAGLLSADKG EVLLEGQNYTLLEDEEKSKFRNENIGFIPQSPALLSYLNVLENIRLAYDLYHTDGSSEEK ARYFLKELGLEHLANSYPKELSGGELRRVIILRALITDVKILIADEPTSDLDIEATREVM ELLQKLNERGLTILIVTHELDTLKYGKSIYTMSEGVLTPGNHLTKTS >gi|224531368|gb|GG658184.1| GENE 110 108852 - 110057 959 401 aa, chain - ## HITS:1 COG:FN1349 KEGG:ns NR:ns ## COG: FN1349 COG0577 # Protein_GI_number: 19704684 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 401 1 401 401 588 79.0 1e-168 MKKRIDATSLAMENIRQRKTRSICMILLVALFSIIVYMGSMFSLSLRSGLDSLSNRLGAD VIVVPAGYKAEIESVLLKGEPSTFYLPENTMKKLEQFEEIEQMTPQIYVATLSASCCSYP VQIMGIDIESDFLIYPWISNSIQKELDDNEAIVGSHVAGEQGEKIHFFNQELKIVGRLKS TGVGFDATVFVNQKTAKELAKASERITANRVAEEDVISSVMIKVKPGVDSVKLSSKISRA LAHEGIFAMFSKKFVNTISSNLKVLSSYVGGLILIIWIFSIVILSISFMTIFNERKKEMA VLRVLGASKKMLQEIIVKEAGILSLWGAALGSFLGILLSMIILPLVAKSLTMPFLSPSIL KYILIFLLSFVLGSLIGPISTIQVVRKLTEKDSYMSLKEEI >gi|224531368|gb|GG658184.1| GENE 111 110061 - 110501 506 146 aa, chain - ## HITS:1 COG:no KEGG:FN1350 NR:ns ## KEGG: FN1350 # Name: not_defined # Def: integral membrane protein # Organism: F.nucleatum # Pathway: not_defined # 1 145 1 144 145 154 60.0 1e-36 MKKNIFEKLGILLSIILLLIPKWIAPVCPGLKEDGGHMGCYYSGNLVMKIAVVMIILCIL MIVLAKYKYVKLLGSAIIIALSAFSYLIPHGMTHMHNEIGKPYGFCKMETMACRVHHTFE IVGIVAGIIAIVMIINIITILLKKEK >gi|224531368|gb|GG658184.1| GENE 112 110574 - 110996 559 140 aa, chain - ## HITS:1 COG:FN1351 KEGG:ns NR:ns ## COG: FN1351 COG4939 # Protein_GI_number: 19704686 # Func_class: S Function unknown # Function: Major membrane immunogen, membrane-anchored lipoprotein # Organism: Fusobacterium nucleatum # 1 140 1 140 140 154 57.0 4e-38 MKKKMWILMFAMSALMIACGKKEFSNMSFQDGNYAGEYISEDSEHKDSCEVALEIKDNKI ISCEAVYKDAKGNIKDEHYGENAGEEKFAKAQLAIEGFEKYSDMLLEVQDPEKVDSIAGA TVSNKEFKMAVWNALEKAKK >gi|224531368|gb|GG658184.1| GENE 113 111014 - 111688 288 224 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 8 224 5 221 311 115 33 1e-24 MEEREVLLEVKNVSKIYGDLHALKDVNLTVRKGEWVAIMGSSGSGKSTMMNIIGCMDKPS VGEVILDGQNITKETQKSLTEIRREKIGLIFQQFHLIPYLTALENVMVAQYYHSIPDEQE ALDALEIVGLKERAHHLPSQLSGGEQQRVCIARALINSPEIILADEPTGNLDETNENIVI NILKKLHTEGTTIIVVTHDAEVGEAAERKIILDYGKIVDDIYLK >gi|224531368|gb|GG658184.1| GENE 114 111692 - 112894 1315 400 aa, chain - ## HITS:1 COG:FN1353 KEGG:ns NR:ns ## COG: FN1353 COG0577 # Protein_GI_number: 19704688 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 400 1 400 400 594 84.0 1e-169 MTKRKMYMKLVLNSLIRRKARMIVALLAIAIGATIMSGLVTIYYDIPRQLGKEFRSYGAN FVVLPSGNEKISEEEFQNLKSKIKVHNVVGIAPYRYETTKINQQPYILTGTDMIEVKNNS PFWYIEGEWTTNEDTENVMIGKEISKKLNLQIGDSFTVEGPKAGTKVVASKQSDSAEESK KKDFGSNFYAKKLTVKGIITTGGAEESFIFLPITLLDEILEDVIQIDGIECSVEADSKQL ELLAENLESYDNNIIARPVKRVTQSQDIVLGKLQVLVLLVNIVVLVLTMISVSTTMMAVV AERRKEIGLKKALGAYNSEIKKEFLGEGSALGFIGGVLGVGLGFIFAQEVSLNVFGRAIE FQWLFAPITVIVSMLITTLACLYPVKKAMEIEPALVLKGE >gi|224531368|gb|GG658184.1| GENE 115 112904 - 114136 1575 410 aa, chain - ## HITS:1 COG:FN1354 KEGG:ns NR:ns ## COG: FN1354 COG0577 # Protein_GI_number: 19704689 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 410 19 428 428 665 82.0 0 MVMIAFTVALGVSLATAMMNVMLGVGDKVNKELKTYGANITVMHKDASILDDLYGIHGED VSDKFLLEEEIPKVKQIFWGFNIVDFAPYLERSIEVKGFLEKVKIYGTWFHHHLVMPTGE ELDTGIKNLKNWWEVKGEWLEEEDENEIMLGSLLAGKYNYQVGDTLEFTSDSGIKKLKIK GIFNSGGDDDSSIYANLKTVQDLFDLKGKISLLEVSALTTPDNDLAKKAAQDPNSLTISE YETWYCTAYVSSISYQLQEALTDSVAKPNRQVAESEGTILNKTELLMLLICILSSFASAL GISNLITASVIERSQEIGLIKAIGGTSTRIILLILTEIVLSGIFGGIFGYVAGIGFTQVI GKTVFSSYIEPAIIVIPIDIALVFAVTILGSIPAIRYLLALKPTEVLHGR >gi|224531368|gb|GG658184.1| GENE 116 114186 - 115451 910 421 aa, chain - ## HITS:1 COG:FN1355 KEGG:ns NR:ns ## COG: FN1355 COG4393 # Protein_GI_number: 19704690 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 125 421 1 298 298 433 72.0 1e-121 MLKFYIDVVSFLTIFAFLVGIILAFLKEEKKMFLNILMLVISVLGISLTTAMIVFKQLYP QKMVKISLFYNRLALSMGMIFILLSILFFIFTLVQKRKMLPLVIITSGLATYFLAFTVFP QVYALTKEFIAFGEDSFGTQSLLRLGGYLLGVLTVVVMGLSIYKMYFRFHLPQRKVFALF IFLIVSLDFILRGVSALARLRFLKASNPFVFQVMILEDKGNLPIFVMFLVAFVFSVLLFL ENLKVKGSFKNRAMLRKEKARLKNNRAWSITLCFMSILVVLSVTLVHSYINKPVELTPAQ PYQEEGNKIIIPLTDVEDGHLHRFSYKATGGNDVRFIVVKKPKGGSYGVGLDACDICGVA GYYERNDDVICKRCDVVMNKSTIGFKGGCNPVPFEYEIVNKKIIIDKAVLEQEKDRFPVG E >gi|224531368|gb|GG658184.1| GENE 117 115799 - 116872 1312 357 aa, chain + ## HITS:1 COG:BS_pyrAA KEGG:ns NR:ns ## COG: BS_pyrAA COG0505 # Protein_GI_number: 16078615 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Bacillus subtilis # 1 355 1 356 364 365 48.0 1e-101 MKGKLILENGMVFNGTVFGEIGETVGELVFNTGMTGYQELLTDPSYYGQMVVMTYPMIGN YGVNLEDMESDKIHLRALIIKEEAKLPNNFRCEMSLDGFLRQNKVIGFKSVDTRYLTKII RDCGAMKGIITSKDLTKKEIEEKFSSYQNKDAVAQVSSKEIYEIPGKGLRLGFMDFGAKA NILRNFQKRDCHLVVFPWNTSAEKIMEYHLDGVFLSNGPGDPADLQNVITEIKSLIAHKM PIIGICLGNQLTAWALGGTTKKMKFGHRGGNHPVKDLDHNRIYITSQNHGYAIDKIPEIA RVSHVSVNDGTVEGLKCDFLHIMTVQFHPEAWPGPTDCEYLFDEFLEVIKGAKKDVR >gi|224531368|gb|GG658184.1| GENE 118 116862 - 120068 4145 1068 aa, chain + ## HITS:1 COG:BH2536 KEGG:ns NR:ns ## COG: BH2536 COG0458 # Protein_GI_number: 15615099 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Bacillus halodurans # 6 1062 7 1060 1062 1164 55.0 0 MLDKTIKKTLVIGSGPIIIGQAAEFDYSGTQACETLKKEGIEVVLINSNPATIMTDKAIA DRIYIEPITFEFVVKVIEKERPDSIIAGMGGQTALNMVVELFEKGILEKYGIKVIGTSIE SIKRGEDRELFREAMEKIGEPILTSHVVESLEEGYKIANEIGYPVVVRPAYTLGGTGGGF AHNPQELEEILLKGLSLSRVGQVLIERSILGWKEIEYEVIRDANGNAITVCNMENIDPVG IHTGDSIVVAPSQTLTDREYQMLRRASLKIVEEIGIIGGCNVQFALHPKSFEYAIIEINP RVSRSSALASKATGYPIARVATKLAMGYLLDEVLNEVTGKTYACFEPSLDYIVVKIPKWP FDKFKKADRRLGTKMMATGEIMAIGENFESAFLKGIRSLEIGRYNLEHPAIESLRMEELK KEVVNPSDERIFVVAEMLRRGYIKEKLQKLTGIDKFFMEKIEWIVKQEELLKKMSFADLD EKFLRNLKKKGFSDKGIADLMKISEEDIHDKRIQYGILPSYKMVDTCAGEFEASSSYYYS TYSQYDEVVVNSGRKMIVIGSGPIRIGQGIEFDYCTVHGVKTLKKLGIESIIINNNPETV STDFSTGDKLYFEPLVTEDIMNIIDKEKPEGVILQFGGQTAIKLAKDLEKRKIKILGTSA EKIDEAEDREKFEEMMEDLDIKRPRGRASWDVEHGIAIANEVGYPVLVRPSYVLGGQGME ICHDEINLVKYLEASFSRDASSPVLIDKYLNGIELEVDAICDGEDVLIPGVMEHLERAGV HSGDSITIYPQQNLYAGTEEQILEITTKIARALKVKGMMNIQFIAYQNELYVIEVNPRSS RTVPYISKISGLPVIEIASRVMLGEKLKDLEFGTGIYKKPNLVAVKVPVFSTEKLSKVEV SLGPEMRSTGEVLGVGNNVEEAIFKGLLAAKRVHQIKDRNILVTIRDKDKEEFLPIAKDL VRYGSKLYATSGTQKYLSEHGVEATAVRKISEEAPNLLDLIKNREVDLLINTPTKANDSQ RDGFKIRRSAIEYGVEVLTSLDTMKAIIKMQDRNLKEESLDVFDISKI >gi|224531368|gb|GG658184.1| GENE 119 120141 - 121364 1185 407 aa, chain - ## HITS:1 COG:BH3820 KEGG:ns NR:ns ## COG: BH3820 COG1301 # Protein_GI_number: 15616382 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Bacillus halodurans # 8 401 1 401 413 272 44.0 8e-73 MKTKKLQLSLTTQIFLALVLAIIVGVCLTKTPEIAADYIAPFGKIFLNLIKWIVCPLVFF SIMSGVISLQDIKKIGSIGGKTLFYYLCTTAFAVAIGLFFANSFKGIFPILATTNLSYDA TASVSFMENIVNIFPKNFIAPFADANMLQVIVSSLFIGFAIIGVGNSAKRVVDAINIVND IFVMGMEMILKLSPIGVFCLLCPVVAKNGPAIIGSLAMVLFVAYICYIVHAVLVYSLSVK VFAGINPITFFKGMMPAILFAFSSASSVGTLPLSMECTEKLGAKKEISSFILPLGATINM DGTAIYQGVCSVFIASCFGIDLTLSQMITIVLTATLASIGTAGVPGAGMVMLAMVLQSVG LPVEGIAIVAGVDRLFDMGRTTVNITGDAACCMVINAMEARKERRKV >gi|224531368|gb|GG658184.1| GENE 120 121464 - 121757 393 97 aa, chain + ## HITS:1 COG:FN1351 KEGG:ns NR:ns ## COG: FN1351 COG4939 # Protein_GI_number: 19704686 # Func_class: S Function unknown # Function: Major membrane immunogen, membrane-anchored lipoprotein # Organism: Fusobacterium nucleatum # 16 97 59 140 140 81 51.0 3e-16 MYLVYSCQTYVTNILKNFSCEAVFKDGDGKIKDENYGKEFEGEKFEQAKIAIQACQLYPE TLVEVQDPEKIEIIAGATHSQAEFKEAVWNALKKAKK >gi|224531368|gb|GG658184.1| GENE 121 121813 - 122187 582 124 aa, chain + ## HITS:1 COG:no KEGG:Ilyop_2182 NR:ns ## KEGG: Ilyop_2182 # Name: not_defined # Def: GrdX protein # Organism: I.polytropus # Pathway: not_defined # 1 118 1 120 126 84 41.0 1e-15 MEYVIITNNRKVANLYQETNQVKFYEHKDFLHILDKVQEQVYEGRKLLSDPIISHLEDAK NPFKSVIVSKEYFSENQEFKKIIDLAVKIATQLETPTETYSEEELEAFRFIDLKLLQESS HAFD >gi|224531368|gb|GG658184.1| GENE 122 122168 - 123436 1223 422 aa, chain - ## HITS:1 COG:FN1122_2 KEGG:ns NR:ns ## COG: FN1122_2 COG0204 # Protein_GI_number: 19704457 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Fusobacterium nucleatum # 198 417 2 222 228 227 50.0 4e-59 MRTSIPEEIRLCQRIVEYAIKHNNNAKAAIRYHTSHQQVKRWRDRYDGTIQSLLPKSRRP KSHPKWEVIDKYNKQAPDYRKVLDTIIVPNEFPKTKIGKIRRFMVPAVLENIGKEEVVTE EPSTEEYTIIKEYLSTSKGRTVVPQAHLELDLGMDSLDMIEFISFLGSRFGMVVQNETIL ENSTVESIAAYVEKHRGEDKIEDVNWKEILNKETEIKLPYYGIFARIGKLLNYLLFWTYF RIEIQGREYLEKKPTIYVGNHQSFLDVALIARAFPTSILKNCFFMAKGVHFKSFFMKFFA KQGNVVLLDINENITEVLQTMAKVLREGKSILIFPEGVRTRDGKLNSFKKSFAILAKELD VDVQAFVIQGAYELFPTSARMPKMGKVHLEILPRFSPKDMTYEEITQEARNQIEKRLNQK HD >gi|224531368|gb|GG658184.1| GENE 123 123523 - 124128 706 201 aa, chain - ## HITS:1 COG:no KEGG:CD1862 NR:ns ## KEGG: CD1862 # Name: not_defined # Def: putative conjugative transposon DNA recombination protein # Organism: C.difficile # Pathway: not_defined # 1 151 106 256 3011 248 91.0 9e-65 MDYIFDISQTVSKNRDVNEVNLWRFDKETHRDVLKELIKAEGYEESDSTLENIFSLSRLD GDEKIDSLMNELRISDEDRISFTKFARDSVSYAVASRFKLDYPMDKELLKENFAMLDSIS LMSLGETVSDISGTVIDATIQKSKELELQKEADKTPDGYAETSNRIYEDREAETDHGLED RGREPSAVPSDDFSPQRNVMR >gi|224531368|gb|GG658184.1| GENE 124 124177 - 124389 142 70 aa, chain - ## HITS:1 COG:no KEGG:CD1862 NR:ns ## KEGG: CD1862 # Name: not_defined # Def: putative conjugative transposon DNA recombination protein # Organism: C.difficile # Pathway: not_defined # 1 70 19 88 3011 134 92.0 1e-30 MRINDFHNILELIKQDVLQSEAEYLKLLKVVGNNQKYDFRSQLSIYDKNPEATACAKFDY WREHFKRTVM >gi|224531368|gb|GG658184.1| GENE 125 124475 - 125902 1004 475 aa, chain - ## HITS:1 COG:FN0191 KEGG:ns NR:ns ## COG: FN0191 COG2865 # Protein_GI_number: 19703536 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Fusobacterium nucleatum # 1 475 1 476 477 720 76.0 0 MTIDEIKKLIQNGEKIDVEFKESRNSLTKDVFDTVCSFNNRNGGHIFLGVNDKRDIVGVS EDKVDKIIKEFTTSINNSQKMYPPLYLLPEVFEIDSKKVIYIRVPEGYQVCRHNGRIWDR SYEGDINITDHAELVYKLYARKQGSYFVNKVYPNLDIEFLDTDVIDKAKRMAVARNKNHV WENMSYEELLRSANLILTDPETKHEGITLAAILLFGKDNSIMSVLPQHKTDAIFRVENKD RYDDRDVVITNLIDSYDRLIAFGQKHLNDLFVLDGIVNVNARDRILREIVSNTLAHRDYS SGFPAKMIIDDEKIMIENSNLAHGMGSLDLQKFEPFPKNPAISKVFREIGLADELGSGMR NTYKYTRLYSGVDPLFEEGDIFRTIIPLKKIATQKVGGSGVAQDVAHSVAQDVAHDKIAL AEFIKEKIRGNNKITRKAIADEAGVSVKTIERTIKEMDNLQYVGSGSNGHWELNE >gi|224531368|gb|GG658184.1| GENE 126 125922 - 126101 196 59 aa, chain - ## HITS:1 COG:no KEGG:SZO_12650 NR:ns ## KEGG: SZO_12650 # Name: not_defined # Def: regulatory protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 59 1 59 59 86 88.0 3e-16 MKDTFMDTAKVMSKGQVTIPKRIRELLDLQNGDYVTFVVNKDKVQIQNSKIFIEENIDK >gi|224531368|gb|GG658184.1| GENE 127 127168 - 128559 1286 463 aa, chain - ## HITS:1 COG:MA1121 KEGG:ns NR:ns ## COG: MA1121 COG0534 # Protein_GI_number: 20089987 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 36 458 23 448 475 196 32.0 9e-50 MGILVSLQVVNMNSKKEIAEKEVRRLKILNQPILLLLIKMSIPTIFGMLITVLYTLTDTF FIGLLNHKSMTAAIGIVFSFTSMIQAIGFWFGYGSGNIMSKKLGEQDEKEATIISSLGIG FSILSGILIATLSWIFISDLSKLIGGNASESLLAFTMQYLKIMIVSIPFSLYSITLYNQL RLCGNVKDGMVGLLLGMFSNMILDPIFIFVFELGFTGAGYATLAGQIIACIFLTMLAKRN GNIPVSLKNVKYNKERIYHILVGGMPNFSRQVITSISLILVNRIAASFGDSLIAALTISS RIVAIAYMIMIGWGQGFQPICAMNYGAKKYDRVKSAFQLTVVVGTIFLILSAILLYLFSE DFIKIMSKDGEVILLGGQILRMQCISIPLLGYLAVASMFMQNTGKYFCSLFISISRQGIF YIPLLYLLVHCYGEFGIYLLQPVSDIFSFVLAVYIVHRNNEYI >gi|224531368|gb|GG658184.1| GENE 128 128528 - 131008 2455 826 aa, chain - ## HITS:1 COG:BS_pps KEGG:ns NR:ns ## COG: BS_pps COG0574 # Protein_GI_number: 16078943 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Bacillus subtilis # 1 823 4 863 866 296 28.0 2e-79 MILDFQEIKKEDILIAGGKGANLGEMTSAKINVPNGFVITAKEYQDFLKVNGIDVLIENE IQKVGNKEDILLKIARDVREKIKYGKFPKEMENRIREKYLNFGENTRVAIRSSATAEDLP DASFAGQQDTYLNVQGLENVFHQIQNCYASLWGNRAVSYRFRQGYSQNAVSIAVVIQEMV ESEKAGVLFTVNPVNKKENEMHINANFGLGESVVSGKVTADTYIVDKSGNIMEVNIGTKE TQIIYGEKGTIEVAVREDKRKNRVLNDVEISKLIKYGLEIENHYGMPMDIEWAMKDDVIY ILQARAITTLANTEKSMVEDTLVEQYIKKQKIKKDTQEMMAFFLEKIPFAYRALEFDYLM AISNQKANILREVGIVFPKNPIIDNDGIQTFSDRGKRINRNIFQFFKFLKNMKDFDTCYQ KCNDFMKIYESKIENMKELNFEIMTLEECKKFMEESYTLLQKLAYDRFKYALFPSVLNSK KLNKIIKKVNTTYSSFDFYWNLNNKTSVVTDDIYKLASKIRKNQNLKREIISGEDFQTLY EKYDNFRVLIDKFMKENGFKSDYNCYCLSAKTFKEDPNRLLNILRPLLNADENNDERKQS KDFLKLMQDMKEIYGNKYSDIEKEVMYFRYFHLVREESQYLWETLFYYVRQCVKRINSIL LGSENYEIGIANLFYQELLEAMKRGELNIADKEKISRRNQKFPLATKVWESSKSLIFKTK GDVLKGISGSVGIAVGKVCVINSPKEFYKMKKGDILVCHFTDPEWTPLFTLANAVVADTG SALSHAAIVAREYNIPAVLGVGFATTKFKDGDMVQVDGNTGIVTGC >gi|224531368|gb|GG658184.1| GENE 129 131033 - 131629 582 198 aa, chain - ## HITS:1 COG:no KEGG:TDE0348 NR:ns ## KEGG: TDE0348 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: T.denticola # Pathway: not_defined # 1 197 1 197 198 233 64.0 3e-60 MAKAFTEEEKIKIKEKIMETALDLFHDKGTKSLSISELTKRVGIAQGSFYNFWKDKESLI LDLMAYRVIQKLDDIEQKIPYSLENPKKFLSDIIYKGSVDLAKKIRKQSMYKDAFKIFLV HDFKEGSRIETLYRDFLDRLAEYWEQNNVVRSVDKKGLANAFIGSFILCCNNEHFNEETF DEVLYIYISGIVSKYIEI Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:14:28 2011 Seq name: gi|224531367|gb|GG658185.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.7, whole genome shotgun sequence Length of sequence - 90800 bp Number of predicted genes - 104, with homology - 100 Number of transcription units - 35, operones - 19 average op.length - 4.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 22/0.000 - CDS 98 - 355 385 ## COG0851 Septum formation topological specificity factor 2 1 Op 2 22/0.000 - CDS 361 - 1152 1278 ## COG2894 Septum formation inhibitor-activating ATPase 3 1 Op 3 . - CDS 1154 - 1795 659 ## COG0850 Septum formation inhibitor - Prom 1819 - 1878 8.4 - Term 1867 - 1903 6.6 4 2 Op 1 . - CDS 1921 - 2217 561 ## Lebu_2042 hypothetical protein 5 2 Op 2 . - CDS 2240 - 2992 599 ## Lebu_2041 hypothetical protein 6 2 Op 3 . - CDS 3014 - 5200 2599 ## COG2217 Cation transport ATPase 7 2 Op 4 . - CDS 5201 - 5590 417 ## Lebu_2039 hypothetical protein 8 2 Op 5 . - CDS 5593 - 6075 547 ## Lebu_2038 hypothetical protein - Prom 6098 - 6157 6.1 9 2 Op 6 . - CDS 6171 - 6776 481 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family - Prom 6796 - 6855 7.3 - Term 6806 - 6851 5.8 10 3 Tu 1 . - CDS 6862 - 8202 1778 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases + Prom 8272 - 8331 23.6 11 4 Op 1 1/0.125 + CDS 8518 - 8718 330 ## COG1278 Cold shock proteins + Term 8736 - 8771 5.1 12 4 Op 2 1/0.125 + CDS 8796 - 10103 1267 ## COG0534 Na+-driven multidrug efflux pump 13 4 Op 3 . + CDS 10096 - 10881 951 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 10891 - 10917 -1.0 + Prom 10896 - 10955 12.7 14 5 Op 1 20/0.000 + CDS 11052 - 12203 1641 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component 15 5 Op 2 24/0.000 + CDS 12228 - 13112 1330 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 16 5 Op 3 19/0.000 + CDS 13116 - 14105 1151 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 17 5 Op 4 18/0.000 + CDS 14089 - 14886 246 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 18 5 Op 5 . + CDS 14902 - 15618 280 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 + Term 15653 - 15697 -0.0 + Prom 15632 - 15691 6.5 19 5 Op 6 . + CDS 15718 - 17205 1763 ## COG4868 Uncharacterized protein conserved in bacteria + Term 17206 - 17253 12.3 - Term 17200 - 17234 2.2 20 6 Op 1 15/0.000 - CDS 17244 - 18455 1795 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 21 6 Op 2 16/0.000 - CDS 18468 - 19115 874 ## COG0307 Riboflavin synthase alpha chain 22 6 Op 3 6/0.000 - CDS 19125 - 20204 1199 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 23 6 Op 4 . - CDS 20209 - 20670 762 ## COG0054 Riboflavin synthase beta-chain - Prom 20883 - 20942 12.5 + Prom 20986 - 21045 18.8 24 7 Tu 1 . + CDS 21107 - 21922 1178 ## COG5266 ABC-type Co2+ transport system, periplasmic component + Term 21943 - 21990 7.6 + Prom 21973 - 22032 14.4 25 8 Op 1 1/0.125 + CDS 22204 - 22749 731 ## COG0386 Glutathione peroxidase 26 8 Op 2 . + CDS 22774 - 23220 403 ## COG1846 Transcriptional regulators + Term 23278 - 23332 -0.0 - Term 23203 - 23249 7.9 27 9 Op 1 . - CDS 23251 - 24330 1425 ## COG0584 Glycerophosphoryl diester phosphodiesterase 28 9 Op 2 . - CDS 24403 - 24708 409 ## gi|257467363|ref|ZP_05631674.1| hypothetical protein FgonA2_07961 29 9 Op 3 24/0.000 - CDS 24732 - 25793 1346 ## COG0208 Ribonucleotide reductase, beta subunit 30 9 Op 4 . - CDS 25759 - 28017 2604 ## COG0209 Ribonucleotide reductase, alpha subunit 31 9 Op 5 . - CDS 28014 - 28220 389 ## FN0101 glutaredoxin - Prom 28263 - 28322 9.5 - Term 28252 - 28287 5.3 32 10 Op 1 1/0.125 - CDS 28328 - 29593 1721 ## COG1114 Branched-chain amino acid permeases 33 10 Op 2 1/0.125 - CDS 29613 - 29978 532 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 34 10 Op 3 . - CDS 29997 - 31142 1466 ## COG1114 Branched-chain amino acid permeases 35 10 Op 4 . - CDS 31218 - 32534 2023 ## COG1160 Predicted GTPases 36 10 Op 5 . - CDS 32543 - 34246 1642 ## COG1032 Fe-S oxidoreductase 37 10 Op 6 . - CDS 34243 - 34950 932 ## COG0813 Purine-nucleoside phosphorylase - Prom 34989 - 35048 11.6 + Prom 34961 - 35020 6.1 38 11 Op 1 1/0.125 + CDS 35140 - 35820 813 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 39 11 Op 2 . + CDS 35836 - 36339 715 ## COG0716 Flavodoxins + Term 36342 - 36391 11.1 - Term 36335 - 36373 5.1 40 12 Op 1 . - CDS 36378 - 36740 473 ## FN1201 hypothetical protein 41 12 Op 2 1/0.125 - CDS 36753 - 37532 1164 ## COG0171 NAD synthase 42 12 Op 3 1/0.125 - CDS 37529 - 38419 1248 ## COG1161 Predicted GTPases 43 12 Op 4 1/0.125 - CDS 38400 - 39083 966 ## COG0313 Predicted methyltransferases 44 12 Op 5 1/0.125 - CDS 39083 - 40366 1709 ## COG0793 Periplasmic protease 45 12 Op 6 1/0.125 - CDS 40363 - 41166 812 ## COG1189 Predicted rRNA methylase 46 12 Op 7 1/0.125 - CDS 41175 - 42005 1007 ## COG3481 Predicted HD-superfamily hydrolase 47 12 Op 8 1/0.125 - CDS 41989 - 43776 1786 ## COG1154 Deoxyxylulose-5-phosphate synthase 48 12 Op 9 1/0.125 - CDS 43792 - 44097 224 ## PROTEIN SUPPORTED gi|15901580|ref|NP_346184.1| hypothetical protein SP_1748 49 12 Op 10 1/0.125 - CDS 44118 - 45962 2359 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 50 12 Op 11 . - CDS 45955 - 47784 2253 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 51 12 Op 12 . - CDS 47787 - 48191 284 ## gi|257453138|ref|ZP_05618437.1| hypothetical protein F3_08766 52 12 Op 13 . - CDS 48208 - 49170 1348 ## FN1213 hypothetical protein 53 12 Op 14 5/0.125 - CDS 49148 - 50458 887 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 54 12 Op 15 1/0.125 - CDS 50445 - 51155 789 ## COG1385 Uncharacterized protein conserved in bacteria 55 12 Op 16 1/0.125 - CDS 51170 - 51586 412 ## COG1959 Predicted transcriptional regulator 56 12 Op 17 1/0.125 - CDS 51576 - 52580 1468 ## COG2255 Holliday junction resolvasome, helicase subunit 57 12 Op 18 . - CDS 52604 - 53209 668 ## COG4399 Uncharacterized protein conserved in bacteria - Prom 53238 - 53297 14.7 - Term 53285 - 53313 1.4 58 13 Tu 1 . - CDS 53323 - 53523 474 ## Ilyop_1541 domain of unknown function DUF1858 - Prom 53554 - 53613 8.9 + Prom 53591 - 53650 9.6 59 14 Tu 1 . + CDS 53676 - 54497 900 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Term 54579 - 54645 31.6 + TRNA 54547 - 54631 67.5 # Ser GGA 0 0 - Term 54531 - 54600 21.6 60 15 Tu 1 . - CDS 54628 - 55017 194 ## gi|315918525|ref|ZP_07914765.1| predicted protein - Prom 55240 - 55299 5.6 - Term 55270 - 55306 5.2 61 16 Tu 1 . - CDS 55394 - 55723 368 ## gi|257467395|ref|ZP_05631706.1| hypothetical protein FgonA2_08126 - Prom 55762 - 55821 3.9 - Term 55778 - 55816 -0.7 62 17 Op 1 . - CDS 55849 - 55974 88 ## gi|257467396|ref|ZP_05631707.1| hypothetical protein FgonA2_08131 63 17 Op 2 . - CDS 55971 - 56195 333 ## gi|257467397|ref|ZP_05631708.1| hypothetical protein FgonA2_08136 - Prom 56216 - 56275 3.4 - Term 56219 - 56264 -0.3 64 18 Tu 1 . - CDS 56326 - 56502 147 ## gi|257467398|ref|ZP_05631709.1| hypothetical protein FgonA2_08141 - Prom 56672 - 56731 11.5 + Prom 56774 - 56833 8.3 65 19 Tu 1 . + CDS 56879 - 56950 87 ## + Term 56970 - 57013 7.1 66 20 Tu 1 . - CDS 57176 - 57337 237 ## gi|315918528|ref|ZP_07914768.1| predicted protein - Prom 57469 - 57528 8.6 - Term 57495 - 57539 9.6 67 21 Tu 1 . - CDS 57545 - 57838 394 ## gi|257467400|ref|ZP_05631711.1| hypothetical protein FgonA2_08151 68 22 Op 1 . - CDS 58472 - 58669 186 ## gi|257467330|ref|ZP_05631641.1| long-chain-fatty-acid--CoA ligase - Prom 58695 - 58754 2.5 69 22 Op 2 . - CDS 58756 - 59202 198 ## Lebu_1448 phosphoesterase PA-phosphatase related 70 22 Op 3 . - CDS 59133 - 59402 207 ## gi|257467403|ref|ZP_05631714.1| hypothetical protein FgonA2_08168 71 22 Op 4 . - CDS 59481 - 60407 1167 ## COG0501 Zn-dependent protease with chaperone function - Prom 60429 - 60488 7.4 - Term 60439 - 60491 12.6 72 23 Op 1 14/0.000 - CDS 60499 - 60783 481 ## PROTEIN SUPPORTED gi|237736458|ref|ZP_04566939.1| LSU ribosomal protein L27P 73 23 Op 2 14/0.000 - CDS 60784 - 61119 269 ## PROTEIN SUPPORTED gi|237742036|ref|ZP_04572517.1| 50S ribosomal protein L27 74 23 Op 3 . - CDS 61132 - 61509 449 ## PROTEIN SUPPORTED gi|237736456|ref|ZP_04566937.1| LSU ribosomal protein L21P 75 23 Op 4 . - CDS 61554 - 62858 1607 ## COG0427 Acetyl-CoA hydrolase 76 23 Op 5 2/0.125 - CDS 62912 - 64270 1472 ## COG0534 Na+-driven multidrug efflux pump 77 23 Op 6 . - CDS 64272 - 64748 707 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 78 23 Op 7 . - CDS 64759 - 65733 1212 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 79 23 Op 8 . - CDS 65807 - 66325 804 ## COG2109 ATP:corrinoid adenosyltransferase - Prom 66346 - 66405 4.8 + Prom 66294 - 66353 8.0 80 24 Tu 1 . + CDS 66521 - 66757 175 ## gi|257467413|ref|ZP_05631724.1| hypothetical protein FgonA2_08218 + Prom 66899 - 66958 8.3 81 25 Tu 1 . + CDS 66983 - 67045 61 ## + Term 67157 - 67196 5.1 + Prom 67152 - 67211 15.3 82 26 Op 1 . + CDS 67256 - 67486 377 ## gi|257467415|ref|ZP_05631726.1| hypothetical protein FgonA2_08228 83 26 Op 2 . + CDS 67483 - 67749 235 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system - Term 67735 - 67778 1.9 84 27 Tu 1 . - CDS 67850 - 67960 105 ## - Prom 67981 - 68040 7.2 + Prom 67953 - 68012 6.1 85 28 Tu 1 . + CDS 68251 - 68439 178 ## + Prom 68686 - 68745 7.4 86 29 Op 1 1/0.125 + CDS 68775 - 69524 1357 ## COG0217 Uncharacterized conserved protein 87 29 Op 2 . + CDS 69563 - 71602 2457 ## COG1200 RecG-like helicase 88 29 Op 3 . + CDS 71658 - 73367 2152 ## COG0442 Prolyl-tRNA synthetase + Term 73372 - 73420 5.8 89 30 Op 1 . + CDS 73434 - 74921 1653 ## COG2317 Zn-dependent carboxypeptidase 90 30 Op 2 2/0.125 + CDS 74940 - 76712 1705 ## COG4907 Predicted membrane protein 91 30 Op 3 . + CDS 76734 - 77276 723 ## COG1704 Uncharacterized conserved protein 92 30 Op 4 . + CDS 77293 - 78477 1820 ## COG0281 Malic enzyme 93 30 Op 5 1/0.125 + CDS 78499 - 79278 1124 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 94 30 Op 6 . + CDS 79288 - 79863 636 ## COG1573 Uracil-DNA glycosylase + Term 79866 - 79921 8.1 - Term 79859 - 79904 2.5 95 31 Tu 1 . - CDS 79932 - 80780 1508 ## COG0214 Pyridoxine biosynthesis enzyme - Prom 80844 - 80903 6.4 96 32 Tu 1 . + CDS 80881 - 82269 1274 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 82286 - 82345 8.6 97 33 Op 1 40/0.000 + CDS 82369 - 83052 689 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 98 33 Op 2 . + CDS 83074 - 84807 731 ## COG0642 Signal transduction histidine kinase - Term 84737 - 84782 0.7 99 34 Op 1 . - CDS 84819 - 86297 2087 ## COG3333 Uncharacterized protein conserved in bacteria 100 34 Op 2 . - CDS 86310 - 86741 540 ## FN2104 hypothetical protein 101 34 Op 3 . - CDS 86752 - 87735 1324 ## COG3181 Uncharacterized protein conserved in bacteria - Prom 87837 - 87896 12.1 - Term 87969 - 88011 4.3 102 35 Op 1 35/0.000 - CDS 88017 - 88805 196 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 103 35 Op 2 33/0.000 - CDS 88763 - 89797 853 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 104 35 Op 3 . - CDS 89790 - 90722 1101 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component Predicted protein(s) >gi|224531367|gb|GG658185.1| GENE 1 98 - 355 385 85 aa, chain - ## HITS:1 COG:FN0177 KEGG:ns NR:ns ## COG: FN0177 COG0851 # Protein_GI_number: 19703522 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Fusobacterium nucleatum # 1 80 1 81 99 101 72.0 3e-22 MGLFDFFKKNNSKDEAKSRLKLVLMQDRAMLPSGVMERIKDDIIQVLSKYVEIDQEQLNI EMSNCDDDPRQIALLANIPIRQKNK >gi|224531367|gb|GG658185.1| GENE 2 361 - 1152 1278 263 aa, chain - ## HITS:1 COG:FN0176 KEGG:ns NR:ns ## COG: FN0176 COG2894 # Protein_GI_number: 19703521 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Fusobacterium nucleatum # 2 262 3 263 264 390 78.0 1e-108 MSQVIVVTSGKGGVGKTTTTANIGAGLAEKGHKVLLIDTDIGLRNLDVVMGLENRIVYDL VDVIEGKCRIPQALIKDKRCSNLSLLPAAQIRDKNDINEEQMKTLIEVLRKDFDYIIIDC PAGIEQGFKNAIAAADRAIVVTTPEISATRDADRIIGLLEANGIKDPKLIVNRIRMDMVK ENNMLSVEDMLDILAIGLIGVVPDDESIVISTNKGEPLVYKGETLAAKAYRNIVERIEGK EVDFLNLDVKMGFFDRLKFIFRG >gi|224531367|gb|GG658185.1| GENE 3 1154 - 1795 659 213 aa, chain - ## HITS:1 COG:FN0175 KEGG:ns NR:ns ## COG: FN0175 COG0850 # Protein_GI_number: 19703520 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Fusobacterium nucleatum # 1 211 1 214 216 196 50.0 2e-50 MKNYVILKGKKDRLEIQLNGEVDFITLRNSMIEKMKEAKNFIGEGKMAIEFTGRDLSELE ENVLIDLIRLHSNLNIVYVFSGEKIKEVNRFSLFHSISEEGPTKFFRGTLRSGSKLEYDG NLVILGDVNPGSLIKASGNVLVLGHLNGTVYAGIEDSNNSFVAAMFLNPVKLIIGNKVSK VLQKEILDTNRVKKGSFQIAQVKQGEIVIEEWR >gi|224531367|gb|GG658185.1| GENE 4 1921 - 2217 561 98 aa, chain - ## HITS:1 COG:no KEGG:Lebu_2042 NR:ns ## KEGG: Lebu_2042 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 9 87 5 83 95 105 68.0 7e-22 MFGFGNGMGNFKREHCVGIAIGVGVAAVGYYLYKKNQDKVDNFLRKQGINVKTSSSTNYE AMDLETLTEMKEHIEDVIAEKELSAGAVTECDVTCANN >gi|224531367|gb|GG658185.1| GENE 5 2240 - 2992 599 250 aa, chain - ## HITS:1 COG:no KEGG:Lebu_2041 NR:ns ## KEGG: Lebu_2041 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 247 1 247 248 287 57.0 2e-76 MKKLTLTILHKLPNRIRFQVSERIRDLKSFAHSLKCDNSKIRLRYNFRTNTLLVEFNPDE IYLQEVIYRVVTALSIENGMLPVRLIEEYESKSLNSLSVYSGAAIMISFLHSLKQATNTT LQTTMNHFALALTTTALAEHAYSETKRKGFFDIELVPALYLIKSYFDNNSISSIALMWLT TFGRHLIVNNSSSKEIKVFRLKDKDGQYHYIADVREDNSIENLSDLVHHVFFNKKKMNKN TEKYVTISMK >gi|224531367|gb|GG658185.1| GENE 6 3014 - 5200 2599 728 aa, chain - ## HITS:1 COG:FN1190 KEGG:ns NR:ns ## COG: FN1190 COG2217 # Protein_GI_number: 19704525 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 1 726 1 732 735 999 75.0 0 MSNKNYLLSCEIKHRIRGRIRIKSRALKYLGTLKEEVESQLMQVRYIENAKISEMTGSIV IYFEDITLTDQNLISLLQNTLNAYLVEIYKNEKTVTGSKYVIERKLQEESPKEIIQKIVA SSTLLAYNIFRPSVSTAVGMARFLNYNTLATLSLAMPVLKNGILSLIKNRRPNADTLSSS AILSSIALGKEKTALTIMILEEFAELLTVYTMKKTRGAIKDMLSVGENFVWKEMEDGSVK RIPIEEVEKGDLILVQTGEKISVDGLIRKGEALIDQSSITGEYMPVTKKQGEEVFAGTIL KNGSITVEAQKVGDDRAVSRIIKLVEDANFNKADIQSYADTFSAQLIPLNFLLAGIVYLG TRNVQKALSMLVIDYSCGIRLSTATAFSAAINTAAKNGILIKGSNYIEELSKSDTVIFDK TGTITEGKPKVQTLQVFGKRMKEDKMLSLAAAAEETSSHPLAVAILNEMKDRGLNIPKHQ DTLIVVAKGMETKVGKDMIRVGSRKYMEENNISLEESQEVVRGILHRGEIIIYVARNEEL IGVIGVSDPPRENIKKAINRLRNQGIDDIVLLTGDLRQQAETIASRMSMDRYESELLPED KAKNILKFQSGGSKVIMIGDGINDAPALSYANVGVALGSTRTDVAMEAADITITSDDPLL VPGVVGLAQKTVKTIKENFAMAIGMNSFALVLGATGILPAIYGSVLHNATTILVVGNSLK LLKYDVNK >gi|224531367|gb|GG658185.1| GENE 7 5201 - 5590 417 129 aa, chain - ## HITS:1 COG:no KEGG:Lebu_2039 NR:ns ## KEGG: Lebu_2039 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 122 1 122 123 148 60.0 7e-35 MLKNLLKTTYFMFHQLKIVHSIPGRLRLTVPGLSAIPEEMRKHEHYTTELILSKEGIQSI EYSYLTNKVLIHYDPSLITDKEIVSWLNAVWKIIVDHSDLYEKMTLGEIEKNLDKFYELL KKELRRGDL >gi|224531367|gb|GG658185.1| GENE 8 5593 - 6075 547 160 aa, chain - ## HITS:1 COG:no KEGG:Lebu_2038 NR:ns ## KEGG: Lebu_2038 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 159 1 159 161 193 59.0 2e-48 MLPSFYGVIEVKHYHQGRLRIQTNSLIQNPELETELLQNIKQIEGIESVKINDKIGSVLI LFQETKIEASFLYLIILKMLHLEEEAFRKKPGKLKLLCRNVLEAVDFSIYNKSKGLLDGK LIVSSIFVYYGIKKLRLTPQLPSGATLLWWAYNLMIKGKE >gi|224531367|gb|GG658185.1| GENE 9 6171 - 6776 481 201 aa, chain - ## HITS:1 COG:FN1468 KEGG:ns NR:ns ## COG: FN1468 COG1853 # Protein_GI_number: 19704800 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Fusobacterium nucleatum # 2 184 3 185 197 221 63.0 5e-58 MKKNFKPSVMLNPVPVVLITSRNKQGEENVFTVAWTGTVCTKPPMLSISIRPERLSYEYI KETLEFTVNLPTKSLVKAVDYCGVRSGRKENKIKNMGFHLKRGEKVSTSYIEECPIALEC KVTQIIPLGTHHLFLAEVVSCFVEDSLIDKENKIHFEEANLITYSHGEYYPSVKKSIGNF GFSVRKKKIKNTCILNKKGIK >gi|224531367|gb|GG658185.1| GENE 10 6862 - 8202 1778 446 aa, chain - ## HITS:1 COG:SPy1150 KEGG:ns NR:ns ## COG: SPy1150 COG0446 # Protein_GI_number: 15675127 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 1 446 1 455 456 582 65.0 1e-166 MEKIVVVGANHAGTAAINTILDNYKDKELVVFDRNSNISFLGCGMALWIGGQISSGDGLF YSSKEILEGKGAKIHMETEVYNIDFENKFVYAKGVQDGKEYRESYDKLILSTGSLPIQLP VPGTELENVQFVKLYQNAKEVIEKLNTNKEIKHVTVVGAGYIGVELAEAFKRWGKEVCLV DFCEDCLSTYYDKNFRDMMDQNLANHGIELRYGQLLKEIKGNGKVESVVTDKEEFKTDMV VLCVGFRPNTALAKDQLETFRNGAYKVDKTQKTSKDGVYAIGDCATVYDNTIDDINYIAL ATNAVRSGIVAAHNVSGTPLEGIGVQGSNGISIYGLNMVSTGLTFEKAQRLGIKVGETTY TDLQRPEFIETKNEPVTIRIVYNLDTRVILGAQIASREDISMAIHMFSLAIQEKVTIDKL KLLDIFFLPHFNKPYNYITMAALSAK >gi|224531367|gb|GG658185.1| GENE 11 8518 - 8718 330 66 aa, chain + ## HITS:1 COG:FN0528 KEGG:ns NR:ns ## COG: FN0528 COG1278 # Protein_GI_number: 19703863 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Fusobacterium nucleatum # 1 66 6 71 71 102 93.0 2e-22 MKGTVKWFNKEKGFGFITGEDGKDVFAHFSQIQKEGFKELFEGQEVTFDITEGQKGPQAS NIVIVK >gi|224531367|gb|GG658185.1| GENE 12 8796 - 10103 1267 435 aa, chain + ## HITS:1 COG:FN1469 KEGG:ns NR:ns ## COG: FN1469 COG0534 # Protein_GI_number: 19704801 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 11 431 13 436 440 293 44.0 4e-79 MKSLTKKIFQFAIPSITSMWIFTLYTIVDGIFIGKYVGPLALGAANLAMPIFNLSFGIGV MIAVGASTLISIAFSQKNFKQGNYYFNLASFFAFLLGTCLSLFCFFALKSIVTFLGANDN LFPYVYEYVRIILFFFPFYLCGYGWEIYIKVDGNAVYPMFCVLSGAGINIALDYIFLAIF HTGVQGAALATGLAQTITSLALLAYIIKYSKNFSFQKVHIYGKNILCILKTGFSEFFTEI SSGILILIFNHFLFFYLGERGIISFSAISYLSSLVIMTMIGFAQGIQPILSFSYGKKSKK EILHIFNISILSIIVLGIFFLLFACFFSQNLVKYFLSIETETLVTSVALKKYSISYLFMG LNILFSAFFTALKKAKFSLLITFCRGIFLPIIALFSTPFLLGKENLWFAATISEGMTFLI SFYLYQNYKKELLHD >gi|224531367|gb|GG658185.1| GENE 13 10096 - 10881 951 261 aa, chain + ## HITS:1 COG:CAC0522 KEGG:ns NR:ns ## COG: CAC0522 COG0561 # Protein_GI_number: 15893812 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 1 257 1 257 265 184 40.0 2e-46 MIKLVASDMDGTLLNEQGNIPSHFWEIEKNLEEKQILFCAASGRQYFNLELLFSSIKNNT IFLAENGALVIFRDKVLFENSMSKKDLKEWLQIASSLQNVFPVFCGKNSAYIEKTENETF LTEVKKYYHKLEMVDSLEEISENMLKLAICDLNGSETNSYPHYKKFNAEYQVVVSGGIWL DIMNQSTNKGVALEKIKEFFEIKYDELLVFGDYLNDYEMMSCGKYSFAMENAHPKLKEKA NYVTKSNKDEGVLFTIKQFLK >gi|224531367|gb|GG658185.1| GENE 14 11052 - 12203 1641 383 aa, chain + ## HITS:1 COG:FN1432 KEGG:ns NR:ns ## COG: FN1432 COG0683 # Protein_GI_number: 19704764 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Fusobacterium nucleatum # 2 380 3 381 383 517 69.0 1e-146 MKKWSYGMLAAALLLTACGGEKKELSQGAETNTIKLGAAGPLTGALAIYGVSATNGTKLA IDEINKNGGILGKQIELNLLDEKGDTTEAVTAYNKLMDWGMVAYIGNVTSKPSVAVSELA AEDGIPMITPSGTQFSITEAGKNIFRVCFTDPYQGEVLATLASEKLHAKTAAVLINNSSD YSDGVAQAFLKKSQEKGIQVVATEGYSDGDKDFKAQLTKLLPLNPDVIVVPDYYEQDALI ASQAREIGLTSQFIGPDGWDGVIKTLASSSHDVLEGALFTNHYAIDDSNEKVQHFVKAYR DSYQDEPSAFSALSYDAVYMLKDAIETVGSTDKEAVAKALREISFEGVTGHLTFDENNNP VKAVTIIKVENGKYKFDSVLEAK >gi|224531367|gb|GG658185.1| GENE 15 12228 - 13112 1330 294 aa, chain + ## HITS:1 COG:FN1431 KEGG:ns NR:ns ## COG: FN1431 COG0559 # Protein_GI_number: 19704763 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Fusobacterium nucleatum # 1 294 14 308 308 412 81.0 1e-115 MEFLLQIINGLQIGSIYALVSLGYTMVYGIAQLINFAHGDIIMVGAYTSLFSIPIFQKMG LPIWATIFPAMIICALLGMLTEKIAYRPLRNSPRISNLITAIGVSLFLENIFMKLFTPNT RAFPKVFSQVSIHLFGISFNYGSVITILLTLTLSIALHLFMKNTKYGKAMLATSEDYGAA TLVGINVNFTIQLTFAIGSALAAIASVLYVSAYPQVQPLMGSMLGIKAFIAAVLGGIGIL PGAVIGGFILGIIESLTRAYLSSQLADAFVFGILIIVLLVKPTGILGKNIKEKV >gi|224531367|gb|GG658185.1| GENE 16 13116 - 14105 1151 329 aa, chain + ## HITS:1 COG:FN1430 KEGG:ns NR:ns ## COG: FN1430 COG4177 # Protein_GI_number: 19704762 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 42 321 1 280 285 376 78.0 1e-104 MEKSKKINYIISFLLLFLIYLGMTLMIHSSIFSRYQLSVIILICINIILAVSLNITVGCL GQITIGHAGFMSVGAYTAALFSKSALVSGVPGFFLALLLGGIVAGVVGIVIGVPALRLNG DYLAIITLAFGEIIRVLIEYFDFTGGPQGLRGIPKFNNFDIIYWIMVFSVILMFSLMTSR HGRAVLAIREDEIASCASGINTTYYKTFAFTLSAIFAGIAGGIYAHNLGVLGAKQFDYNY SINILVMVVLGGMGSFTGSILAAIVLTLLPEMLREFSDYRMIVYAVILIFMMIFRPKGLL GREEFQLSLALTWCKQKLRIGGKKNGNHQ >gi|224531367|gb|GG658185.1| GENE 17 14089 - 14886 246 265 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 9 250 1 231 245 99 25 6e-20 METINKNAILSAHNISIQFGALKAVSDFNLEIYPGDLVGLIGPNGAGKTTVFNVLTGVYP ASSGEYHFNGNLIKNSSTSKLVTQGLARTFQNIRLFKYLSVLDNVMVAHNFSMKYGIFSG MLRLPSCWKEEKEIRKKSMNLLKIFHLDKFANQAAGNLPYGEQRKLEIARAMATNPKLLL LDEPAAGMNPTETEELMKTIKFIRDTFGIAILLIEHDMKLVLGICEKLVVLDHGTIIASG NPQEVINNPQVVTAYLGQDNTEEEE >gi|224531367|gb|GG658185.1| GENE 18 14902 - 15618 280 238 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 228 1 226 305 112 32 7e-24 MSSILKIENLHVFYDNIHALKGISLEVHEGEIVSLIGANGAGKTTTLQTISGLIQAKQGT IHFRDKDIMKQKPEQICKLGIAQVPEGRRIFSRLPVKDNLKLGQYIIKDSGENKEKDRAQ FYSIFPRMSERKNQLAGTLSGGEQQMLAMGRAIMSRPKLLILDEPSMGLSPLFVKEIFNV IKKLNEMGTTILLVEQNAKMALSISDRAYVIETGKITLEGNAKELLKNPEVKKAYLGA >gi|224531367|gb|GG658185.1| GENE 19 15718 - 17205 1763 495 aa, chain + ## HITS:1 COG:FN1121 KEGG:ns NR:ns ## COG: FN1121 COG4868 # Protein_GI_number: 19704456 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 494 1 505 506 792 76.0 0 MKIGFDHDKYLEEQSKFIAERVNHYDKLYLEFGGKLMFDLHAKRVLPGFDENAKIKVLSK LKDKVEVVICVYAGDIERNKMRGDFGITYDMEVFRLIDDLREHDLKVNSVVITRYEERPA TALFITKLERRDIKVYKHLATKGYPTDIDTIVSDEGYGKNPYIETERPIVVVTAPGPGSG KLATCLGQLYHEFKRGKSAGYSKFETFPVWNVPLKHPLNIAYEAATIDLADVNMIDPFHL EAYGETTINYNRDIEAFPLLKRIIEKITGEESIYKSPTDMGVNRVGFGIIDDAVVQEASK QEIIRRYFNAGCEYKKGYIDYPTFQRAELIMRNLNLTEEDRKCVAAARNKAISSGMLSAV ALELQDGSIITGRQSELMDATSAAILNAVKHLADFDDKLLLLSPVILEPILTLKEKTLNH KNVPLDCEEILIALSISAATNPMAASALSKLQELKGVQAHCTHILAKKDEQTLKKLGIDI TCDQVFPTENLYYNS >gi|224531367|gb|GG658185.1| GENE 20 17244 - 18455 1795 403 aa, chain - ## HITS:1 COG:FN1508_1 KEGG:ns NR:ns ## COG: FN1508_1 COG0108 # Protein_GI_number: 19704840 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Fusobacterium nucleatum # 1 203 1 203 203 314 76.0 2e-85 MLSRIEDALEDIKNGKPIIVVDDENRENEGDLFVAAERANYDAINLMAIEGRGLTCVPMS REWAERLQLLPMTAVNTDAKCTAFTVSVDYKYGTTTGISIGDRLTTILHLADSSSKAEDF TRPGHIFPLIAKDRGVLEREGHTEATVDLCRVAGLKPVAVICEILKQDGTMARMDDLEIF AKEHDLKIISIEDLIKYRKKNDELVKIEIKAQMPTAYGSFSIVGFDNQLDGKEHIALVKG DVKGKENVLIRVHSECFTGDILGSKRCDCGDQLHSAMKRIDKEGEGIILYLRQEGRGIGL INKLKAYKLQEEGLDTLDANLHLGFAGDLRDYGIAAQMLHALGVKSIRLLTNNPAKLEGL EEYGVKITGREEIEIHHNEVNEHYLLTKQLRMRHMLHVKKSEK >gi|224531367|gb|GG658185.1| GENE 21 18468 - 19115 874 215 aa, chain - ## HITS:1 COG:FN1507 KEGG:ns NR:ns ## COG: FN1507 COG0307 # Protein_GI_number: 19704839 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Fusobacterium nucleatum # 1 215 34 251 251 282 65.0 4e-76 MFTGLVEEMGRVLSITEGNHSMQIKIQCKKVLEGAKLGDSIATNGTCLTAVEIGKDYFVA DCMHETMKRTNLHRLKKSDFVNLEKSITLSTPLGGHLVTGDVDCEGKITNIRQDGIAKIY TVELPKYYMKYVVEKGRVTLDGASLTVMELGDSSLGVSLIPHSQEMIILGKKKVGDYINI ETDLIGKYVEKLLSFPKQEEKKSKLSLDFLAENGF >gi|224531367|gb|GG658185.1| GENE 22 19125 - 20204 1199 359 aa, chain - ## HITS:1 COG:FN1506_2 KEGG:ns NR:ns ## COG: FN1506_2 COG1985 # Protein_GI_number: 19704838 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Fusobacterium nucleatum # 145 357 2 220 223 249 55.0 4e-66 MEDLEYMHLALELAKHGEGRVNPNPLVGAVVVKNGKIIGKGYHHEYGGPHAEVFALQEAG EEAKGATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCVISMGDPNPLVGGKGISMMRDAGI EVEIGLCETEARALNRVFLKYISTKLPFLFLKCGITLDGKLATRDFQSKWITNEIAREKV QQLRNKYTGIMVGVHTVIEDNPSLDARIENGRDPYRIIVDPYLEIPLSSKLLHRHDKKTV IITSFLEKETQKKKELDDLETRFIFLEDRIFSWPQMLIEIGKLGIDSVLLEGGGQLISSA FREDVIDGGEIFIAPKILGDKEAVAFVSGFSKESMDEAITLPNVELHQYGNNCSMEFYR >gi|224531367|gb|GG658185.1| GENE 23 20209 - 20670 762 153 aa, chain - ## HITS:1 COG:FN1505 KEGG:ns NR:ns ## COG: FN1505 COG0054 # Protein_GI_number: 19704837 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Fusobacterium nucleatum # 1 151 5 155 157 232 78.0 2e-61 MHTLEGKYSGKGLRVGIVAARFNEFITSKLISGAEDALLRHEVEEKDITLAWVPGAFEIP LAAKRMANSGKYDCIITLGAVIKGSTPHFDYVCAEVSKGVAHIGLESNIPVIFGVLTTNS IEEAIERAGTKAGNKGFDVAMTGIEMANLLKDM >gi|224531367|gb|GG658185.1| GENE 24 21107 - 21922 1178 271 aa, chain + ## HITS:1 COG:FN0947 KEGG:ns NR:ns ## COG: FN0947 COG5266 # Protein_GI_number: 19704282 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 271 1 270 270 377 67.0 1e-105 MLSKKILFTSLALCISASAFAHFQLIHTTSSNITDKNTVPFELIFTHPGEGMEGHSMDIG KDEKGSIKPMEAFFSVHKEQKTDLKNKLVSSKFGPNGHQVQAYKFTFDKTTGLKGGGDWG FVAVPAPYYEASEEIYIQQVTKAFVNKDDISTDWDARIAEGYPEIIPLNNPTNLWVGQVF RGKVVDPEGKAVANAEIEVEYINADIQNSQFVGENKFENAAMVLRADEFGYFSFIPVHAG YWGFAALGAGGEKTHNGKELSQDAVLWIEAK >gi|224531367|gb|GG658185.1| GENE 25 22204 - 22749 731 181 aa, chain + ## HITS:1 COG:FN2007 KEGG:ns NR:ns ## COG: FN2007 COG0386 # Protein_GI_number: 19705303 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Fusobacterium nucleatum # 1 181 17 197 199 236 63.0 2e-62 MNIYEFNVKNIKGEDISLQDYQGKVLLIVNTATACGFTPQYNDLENLYKKYQEKGLIILG FPCNQFGQQAPGTDYEISDFCSLNFGVSFPQFSKIDVNGETAHPLFQYLQSEKSFAGFDA EHKLTPILEDILSKEDPNFTEKSSIKWNFTKFLVDRNGKVLQRFEPTTDISKIDEIIKSV L >gi|224531367|gb|GG658185.1| GENE 26 22774 - 23220 403 148 aa, chain + ## HITS:1 COG:BS_ykmA KEGG:ns NR:ns ## COG: BS_ykmA COG1846 # Protein_GI_number: 16078380 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 2 147 3 147 147 132 51.0 2e-31 MDKYDVLKLENQLCFPLYAVAKEITRAYQPYLEPLHLTYTQYITMMVLWEQKKVSVKELG SYLYLDSGTLTPLLKKMEQKSWIRRIRSKEDERKVWIELTTEGEALKEKAVNIPKNMGKC INIDAKEAKQLYLILHHLLQNPHFQKNK >gi|224531367|gb|GG658185.1| GENE 27 23251 - 24330 1425 359 aa, chain - ## HITS:1 COG:FN1908 KEGG:ns NR:ns ## COG: FN1908 COG0584 # Protein_GI_number: 19705213 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Fusobacterium nucleatum # 1 359 1 353 357 582 79.0 1e-166 MNVKKVLVLASVLLSVSAYAESMEANGMHNKLIIAHRGASGYLPEHTLESKALAFAQGAD YLEQDLAMSKDGRLIVIHDHFLDGLTDVAKKFPDRKREDGRYYVIDFTWDELQTLEMTEN FSTENGVQKQVYPGRFPLWASHFRLHTFEDEIEFIQGLEKSTGRKVGIYPEIKAPWFHHQ NGKDIAKATLEVLKKYGYTKKSDLVYLQTFDYNELKRVKTELMPQMGMDLKLVQLIAYTD WHETEEKGKDGKWINYDYDWMFKKGAMKEVAKYADGVGPGWYMLVDENTSTLGNLKYTDM VEDIKTTKMENHPYTVRKDALPKFVKDIDEMYDALLNKSGATGLFTDFPDLGVKFVETK >gi|224531367|gb|GG658185.1| GENE 28 24403 - 24708 409 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467363|ref|ZP_05631674.1| ## NR: gi|257467363|ref|ZP_05631674.1| hypothetical protein FgonA2_07961 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 101 1 101 101 186 100.0 6e-46 MNIVLDEKVEKYMQQKHLSALIIEMTPVGCSCVGIHNHAEPDYLETDKIAEYEKKESYEL YVWKEEIKVFIEKDLLPCNEISILGTYNPFNKRVYMHCEIK >gi|224531367|gb|GG658185.1| GENE 29 24732 - 25793 1346 353 aa, chain - ## HITS:1 COG:FN0103 KEGG:ns NR:ns ## COG: FN0103 COG0208 # Protein_GI_number: 19703451 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Fusobacterium nucleatum # 6 353 1 348 348 587 84.0 1e-167 MKKRSVKVAVDRKRLFNPEGNDSLLERRIIKGNSTNLFNLNNVKFTWATQLYRTMMANFW IPEKVDLTQDKNDYENLTVPEREAYDGILSFLIFLDSIQTNNVPNISDYVTAPEVNLLLS IQTFQEAIHSQSYQYIIESILPKESRDLIYDKWRDDKILFERNRFIAQIYQDFIEEASDK NFAKVLVANYLLESLYFYNGFNFFYLLASRNKMVGTSDVIRLINRDELSHVVLFQKIIRE IKAENPNFFQEEEIRMMFQTAVEQEILWTEHIIGNRVLGITTETTEAYTKWLANERLRTI GLAPMYDGFTKNPYKHLERFADTEGDGNVKSNFFEGTVTSYNMSSSIDGWDEF >gi|224531367|gb|GG658185.1| GENE 30 25759 - 28017 2604 752 aa, chain - ## HITS:1 COG:FN0102 KEGG:ns NR:ns ## COG: FN0102 COG0209 # Protein_GI_number: 19703450 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Fusobacterium nucleatum # 1 752 1 755 755 1186 76.0 0 MNLERRKVINRDGIIEDLNIEKIREKLVRACAGLEVNMVELESKIESIYEENITTKKIQE SLINSAVSMTSFEESDWAEVAGRLLMMEAEREVYHSRGFSYGELEKTISLMLSYGLYDAR LSKYTKEEIYELNQAIVPERDMVYDYAGASMFVHRYLLKYSGKIHELPQEVFMIIAMLLS IYEKDKVKVAKEIYEGLSLRKISLATPILANLRIPNGNLSSCFITAIDDNIESIFYNVDS IAKISKNGGGVGVNISRIRAKGSMVNGYYNASGGVVPWIRILNDTAVAVNQQGRRAGAVT VAIDSWHLDMESFLELQTENGDQRGKAYDIYPQVVVSNLFMERVKSGADWTLVDPYEIRQ IYGVELCELYGVEFEEVYERIERENKIQLKKIMKARDLFKEIMKSQLETGMPYIFFKDRA NERNHNSHLGMIGNGNLCMESFSNFSPSKNFQEKIVGNVAIHEKEMGEVHTCNLLSLNLA EIMEEELEKYTSLAVRALDNTIDLTVTPLAESNKHNEKYRTIGVGAMGLADYLAREYMIY EESEEEISQVFERIAAYALKASAFLARDRGQYPAFVGSKWSQGIFFGKTQDWYEKHSKYS DVWKEVFYLVDQYGLRNGELTAIAPNTSTSLLMGATASVVPTFSRFFIEKNQSGATPRVV KYLKDRAWFYPEFKNVDPKTYVKITSKIGQWTTQGVSMELLFDLNKNVRAKDIYDTLLTA WETGCKSVYYVRTIQKNTNIMNEKEECESCSG >gi|224531367|gb|GG658185.1| GENE 31 28014 - 28220 389 68 aa, chain - ## HITS:1 COG:no KEGG:FN0101 NR:ns ## KEGG: FN0101 # Name: not_defined # Def: glutaredoxin # Organism: F.nucleatum # Pathway: not_defined # 1 67 1 67 67 83 68.0 2e-15 MIRVYSKEDCAKCKNLKSILEGKGLDFEYIEDKKQLMIVASKARIMSAPVIEYQEKVYSM DDFLKVIA >gi|224531367|gb|GG658185.1| GENE 32 28328 - 29593 1721 421 aa, chain - ## HITS:1 COG:FN0053 KEGG:ns NR:ns ## COG: FN0053 COG1114 # Protein_GI_number: 19703405 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Fusobacterium nucleatum # 1 419 1 421 424 390 60.0 1e-108 MYTWKNVLLTGFALFAMLFGAGNLIFPPMLGKTLGDVWLTGTIAFILTGVGFPLLGIIST ALSGKKDINEFADKVSPLFAKIFFIALILAIGPLLAIPRTGATAYEITFLHAGVSSSLYK YVYLVLYFGITLLFSLKANKVVDRIGSILTPILLAMLFIIIVKGVSSPLGVPVAGTILTP FKNGFIEGYQTMDTLASIVFAGVILKSIRGDRELSPKQEFSFLIQVSIIACLGLSIVYGG LSFIGASVSGMGSELGKTELLVYLTTTLLGKSGYAILGICVAGACLTTAIGLVATVADYF SKITSLSYEILAVLTTIVSFIFACFGVDVIVKIAVPVLVFLYPLAMALILLNVFQIQNHF VFKGTCLGAGLISFYEMLGVLGVQNEFLANIYSFLPFSSLGFAWLVPAVLGGVLFRLIKK N >gi|224531367|gb|GG658185.1| GENE 33 29613 - 29978 532 121 aa, chain - ## HITS:1 COG:BH3485 KEGG:ns NR:ns ## COG: BH3485 COG1393 # Protein_GI_number: 15616047 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Bacillus halodurans # 8 115 8 115 119 139 66.0 1e-33 METLLIWYPKCGTCRNAKKWLDEHGIEVLTRHIVEENPTKEELKHFWELSSFPLKKFFNT SGILYRELGLKDKLKEMSEEEMLSLLSTNGMLVKRPILVQDKKVLVGFKEAEWKQFFNIA E >gi|224531367|gb|GG658185.1| GENE 34 29997 - 31142 1466 381 aa, chain - ## HITS:1 COG:FN0053 KEGG:ns NR:ns ## COG: FN0053 COG1114 # Protein_GI_number: 19703405 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Fusobacterium nucleatum # 6 381 6 381 424 327 51.0 3e-89 MVKRKDVVFTGFALFAMLFGAGNLIFPPMLGHNLGSSWGIAALGFVVTGVGFPLLGLIAA VHTGPELDDFAKRVSPLFARSYITILILTIGFFLAMPRTGATAYEMTLQNVGDTNPIHKY IFLVCYFLITWMFSLRANKVVERIGSILTPVLLIILAVIMYQGIFHPFSVPETVALEEAP FKIGFIQGYQTMDTLATIVYSAVIMKSIRHGRNLSQEEESSFLWKSSLIAVGLLACVYGA LTYIGATFSGIETVGNTDLLSQIVRNLLGDFGNIILGLAVAGACLTTAIGLVATVGDYFE KILPFSYRTIVTVTCIAGFVFSNFGVQTIIQVAIPILVVLYPISMMLIFLNLLQKYMKND MVYRIIIVLTTMFGLYQAYSL >gi|224531367|gb|GG658185.1| GENE 35 31218 - 32534 2023 438 aa, chain - ## HITS:1 COG:FN0170 KEGG:ns NR:ns ## COG: FN0170 COG1160 # Protein_GI_number: 19703515 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Fusobacterium nucleatum # 1 437 1 440 440 777 87.0 0 MKPIVAIVGRPNVGKSTLFNNLIGDRVAIVDDMPGVTRDRLYRETEWNGAEFVVVDTGGL EPANNEFMMTKIKEQAEVAMNEADVILFVVDGKAGLNPLDEEVAYILRKKQKPVVLCVNK IDNYLQQQDDVYDFWGLGFEYLVPISGAHKVNLGDMLDMVVDIIGKLEFPEEEEDILKLA VIGKPNAGKSSLVNRLSGEERTIVSDIAGTTRDAIDTLIEYKENRYMIIDTAGIRRKSKV EESLEYYSVLRAIKTIKRADVCLLMLDAQEGLTEQDKRIAGIAAEERKPIVIVMNKWDLV KNKDMKKYKEELYAELPFLSYAPIEFVSALTGQRTTKLLEIADTIYEEYTKRISTGLLNT VLKDAILMNNPPTRKGRLIKINYGTQVSVAPPKFVLFCNYPELIHFSYARYIENKFRESF GFEGSPILISFEKKSKEE >gi|224531367|gb|GG658185.1| GENE 36 32543 - 34246 1642 567 aa, chain - ## HITS:1 COG:FN0734 KEGG:ns NR:ns ## COG: FN0734 COG1032 # Protein_GI_number: 19704069 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Fusobacterium nucleatum # 1 564 1 564 568 1027 85.0 0 MKFLPTTREEMKKLGWDTLDVLLISGDTYLDTSYNGSVLVGKWLVKHGFRVGIIAQPEVD SPVDITRLGEPNLFFAISGGCVDSMVANYTATKKRRQQDDFTPGGINNRRPDRAVLVYSN MIRRFFKGTKKKIVISGIESSLRRITHYDYWTNKLRKPILFDAKADILSYGMGEMSMLAL ARALQQNEDWTEIRGLSYLSKEPKENYLALPSHADCLASKDVFTKAFHQFYLNCDPITAK GLYQKCDDRYLIQNPPSLTYTEKEMDAIYSMEFARDVHPYYKAMGAVRALDTIRYSVTTH RGCYGECNFCAIAIHQGRTVMSRSQSSIVEEVTEMTKLPKFKGNISDVGGPTANMYSLEC KKKLKLGSCPDRRCLYPKKCPSLQVNHRNQVDLLRKLKKIPKIKKIFIASGIRYDMILDD TQCGQMYLKELVQDHISGQMKIAPEHTEDSILSLMGKDGRSCLNEFKNQFYQLNQKLGKK QFLTYYLIAAHPGCREKEMVDLKRFASKELRVNPEQIQIFTPTPSTYSTLMYYTEKDPFT GKKLFVEKDNGKKQKQKDIVLDKKYRS >gi|224531367|gb|GG658185.1| GENE 37 34243 - 34950 932 235 aa, chain - ## HITS:1 COG:FN0435 KEGG:ns NR:ns ## COG: FN0435 COG0813 # Protein_GI_number: 19703773 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Fusobacterium nucleatum # 1 235 7 241 241 318 65.0 4e-87 MSVHIAAKLGEIAEIVLLPGDPLRAKWIAENFLENPICYSTVRGMYGYTGEYQGKRISIQ GTGMGIPSISIYVNELIQEYGVKTLVRIGSAGSYQEDVKIRDIVLAMSTCTDSSLNANRF PNANFAPTSDASLFLKAYQLAKEKKLSVHAGSILTSDEFYNDDPDTWKHWAKFGILCVEM ETAALYTLAAKFKVKALSILTISDSLVTKEATSSEERQTSFSTMVDLALGVVVNI >gi|224531367|gb|GG658185.1| GENE 38 35140 - 35820 813 226 aa, chain + ## HITS:1 COG:FN0725 KEGG:ns NR:ns ## COG: FN0725 COG1179 # Protein_GI_number: 19704060 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Fusobacterium nucleatum # 1 226 1 234 234 261 56.0 1e-69 MIFKRTELLIGKDKLEMLQNSHILLFGLGGVGGQAFEALVRTGIGEISIVDFDTVDITNC NRQILATQNTIGKYKTEVAIERALSINPTIKIHSYTERVSKDNVLSFFQNRQYDYIIDAI DTITAKLDIIQYAWEHQIPVISSMGTARKWNPSLLEITDIKKTSVCPLARVMRRELKKRG VNRCKVVYSKEEAKCLQEDTLGSIAFVPPVAGLLLVGEVVKDLCNL >gi|224531367|gb|GG658185.1| GENE 39 35836 - 36339 715 167 aa, chain + ## HITS:1 COG:FN0724 KEGG:ns NR:ns ## COG: FN0724 COG0716 # Protein_GI_number: 19704059 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 167 1 167 167 170 55.0 9e-43 MNKIGIFYGTSGSTTLGIVDELEFQLRKENYQTYNVKDGIEAMKDYDNLILVTPTYGVGE LQPHWQKQYETLSKMDFHGKVVGLIGLGNQFAFGESFVGALRVLYDVIIKNGGKVVGFVS DKEYSHEETTSVIDGNFVGLPIDEINQGSKTPQRIISWLEVVKKEMK >gi|224531367|gb|GG658185.1| GENE 40 36378 - 36740 473 120 aa, chain - ## HITS:1 COG:no KEGG:FN1201 NR:ns ## KEGG: FN1201 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 120 2 121 124 87 44.0 1e-16 MIDNHLKEEFQEYQKEKQQISEVIRKAEGRNNSQHKIISAIFVILIVAILILGIILNRLT LLQTLEIATLLAVLKVIWLFYDLQKSMHFQFWLLNSLEFRLNEIDKKARNIERTLKEETK >gi|224531367|gb|GG658185.1| GENE 41 36753 - 37532 1164 259 aa, chain - ## HITS:1 COG:FN1202 KEGG:ns NR:ns ## COG: FN1202 COG0171 # Protein_GI_number: 19704537 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Fusobacterium nucleatum # 1 249 8 256 258 307 58.0 2e-83 MKSLEEKLVKFIQEQVKNAGFKKVILGLSGGIDSALVAYLAVKALGKENVIAIKMPYKTS SQESIDHANLVLQDLDLQEKTVEITPMVDAYFENQTSASSLRRGNYMARTRMTVLFDQSA LENALVIGTSNKTEILLGYGTLFGDMACSFNPIGDIYKKDVWSLSRYMGVPKEIIEKQPS ADLWAGQTDEQELGLSYKEADEILERLVDKKQSLEEIVAAGYEEGIVNKVIQKVKSSAYK RKLNPIAKVGEVLGRDFSF >gi|224531367|gb|GG658185.1| GENE 42 37529 - 38419 1248 296 aa, chain - ## HITS:1 COG:FN1203 KEGG:ns NR:ns ## COG: FN1203 COG1161 # Protein_GI_number: 19704538 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Fusobacterium nucleatum # 1 286 1 287 289 389 74.0 1e-108 MSMTEINWYPGHMKKTKDLIKENMPLIDVVLEIVDARIPISSKNPDIPVFAKNKKRIVVL NKSDLMEKSELSKWKEYFLKVEKADAVVEISAETGYNVKQLYACIDKVSKEKKDKLYAKG LKKVNIRIIVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTKGKQWVKLKDGLELLDTPGI LWPKFENREVGFHLAMTGAIKDEILPLEEVACAFLSKMISLGKWNILQQRYKLLEEDYNE ITGYILEKIALRMAMLNKGGELNVKQAAYTLLRDYRSGKLGKFGVDILENSIGEEE >gi|224531367|gb|GG658185.1| GENE 43 38400 - 39083 966 227 aa, chain - ## HITS:1 COG:FN1204 KEGG:ns NR:ns ## COG: FN1204 COG0313 # Protein_GI_number: 19704539 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Fusobacterium nucleatum # 1 227 1 235 235 307 72.0 1e-83 MLYIVATPIGNLEDMTFRAVRILKEVEYIFAEDTRVTRKLLQHYEISTKLDRYDEFTKMK RIPDIIKLLEEGKNIALVTDAGTPCISDPGYELVDAALQAGIQVSPIPGASALTASTSVA GISLRRFCFEGFLPKKKGRQTLFKSLLEEERPIIIYESPFRLIKTLKDIENYLGNREVVI VREITKIYEEILRGRTKELLEKLENKTIKGEIVLIIKGVNDDVDDRD >gi|224531367|gb|GG658185.1| GENE 44 39083 - 40366 1709 427 aa, chain - ## HITS:1 COG:FN1205 KEGG:ns NR:ns ## COG: FN1205 COG0793 # Protein_GI_number: 19704540 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Fusobacterium nucleatum # 12 418 2 423 427 505 63.0 1e-143 MKIVNKYMILFLLISSLCFAKEKNRVGFLTNLKELKEISDIMDIVNENYVDTGDHKFSRK TLMQGALKGMVESLEDPHSTYFTKAELESFEEDVRGKYVGVGMVVQKKANEALTVVSPIE DAPAFKVGIRPRDKVVSIGGVSTYNLTTEECVKKLKGKAGTSIAIKVQREGREKLLDFTL KRETIQLKYVKHRMLDSKIGYLRLTQFGENIYPDLRKALEDLQAKGMKALVFDLRSNPGG ALDQAIKVSSMFLKDGKVVSVKGRDGKEKISKREGKYYGDFPLVILVNGGSASASEIVAG AIKDNKRGMLVGEKTFGKGSVQTLLPLPDGDGIKITIAKYYTPSGVSIHGKGIEPDVPVE DKDYYLLFDGTITNVDEKENKASKKKLIQEIKGTKEAKKVDTHKDIQLNVAKGILEGILV GKGREKK >gi|224531367|gb|GG658185.1| GENE 45 40363 - 41166 812 267 aa, chain - ## HITS:1 COG:FN1206 KEGG:ns NR:ns ## COG: FN1206 COG1189 # Protein_GI_number: 19704541 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Fusobacterium nucleatum # 2 245 8 250 266 217 51.0 2e-56 MKERLDQILWKYGYVDSIEKAKRLIMLGAVIVNEQRIDKAGTLFKYSEEMNIRVKGQENP YVSRGGFKLKKAIDHFACSFQGKRVLDIGASTGGFTDCSLQEGAAYVYALDVGTNQLAWK LRKDPKVKSIEQCHVKDLNWDILDQESVDYIVMDVSFISVCGIFRYLYPFLEENGKLLLL IKPQFEVEKHFLEKGIVYERKAHQEVLERVIEIAKENGFFLQNIEISPILGGKGNVEYIS CFSKQQTSAVLELESILEKAKEMGGLK >gi|224531367|gb|GG658185.1| GENE 46 41175 - 42005 1007 276 aa, chain - ## HITS:1 COG:FN1207 KEGG:ns NR:ns ## COG: FN1207 COG3481 # Protein_GI_number: 19704542 # Func_class: R General function prediction only # Function: Predicted HD-superfamily hydrolase # Organism: Fusobacterium nucleatum # 1 274 1 274 274 297 60.0 1e-80 MEEKNNKSYYFIKELLQLDLVKALELYDDQGVKVSTHTYDVLNLSIEEILKQYKTLENAS KKLDFFAITVGVIIHDVSKASIREQEENLSHSQMMIKNPDYILKEVEEVLREVEEKTGLF LKKTIKKRISHIVISHHGRWGKIQPSTKEACIVYKGDMYSAKYHRINPIGADSILAYIEK GYSLEEICQKLNCTPGVVKDRLKRSRNELKLSTIGQLIHYYQKNKKVPLGDEFFVLRVEE TKKLKQLVDKQGFQELILENPLIPYFEDEAIFKEKK >gi|224531367|gb|GG658185.1| GENE 47 41989 - 43776 1786 595 aa, chain - ## HITS:1 COG:FN1208 KEGG:ns NR:ns ## COG: FN1208 COG1154 # Protein_GI_number: 19704543 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Fusobacterium nucleatum # 6 595 4 600 600 664 54.0 0 MAKVLDLEKKAIEIRKTLIQTVSRTGGHLAPNLGVVELTLALHHVFDFSKDKLLFDVGHQ SYVHKLLTDRKERFSTLRTRGGVGPFLDPTESSWDHFISGHAGTALAAAVGMAKAYPEKK IVVVIGDASIANGHSMEALNYIGGEKIKNILVILNDNEMSIGRNVGSLSKFLGKVMLSSP YLSLRKEIRSFVDKIQATSIKDTLERMEISVKNFLFPTNVAENFGYIFLGSIDGHNLEEL VDTFLKAKEMEGPLFLHVKTVKGKGYRFAEQNTEKFHGIAPFDLSTGVVANSSETYSNVF GTKMKEISKKDNSVFAITAGMLSGTGLKKMAEVFPERVLDTGIAEGFATTMSAGLAISGK KPYLCIYSTFLQRSFSQIIHDISLQNLPVRFIIDRAGIVGEDGKTHHGLHDLSFLLSIPN IVVLNPTTKEELEEMLNFSLEYQQGPMAIRIPRDVAYSLPMQSTWQIGTWQEVKTGKKTL LIAVGSMLKEVLILELEATIVAASSLRPLDKEYIKSQFEKYETIIVCEENYKEASFFQYL LNELDSMGIQRKLYSISLSSFIISHGKRKELLEEYGLSGAKLLERIEEIVDGGKK >gi|224531367|gb|GG658185.1| GENE 48 43792 - 44097 224 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15901580|ref|NP_346184.1| hypothetical protein SP_1748 [Streptococcus pneumoniae TIGR4] # 1 101 1 103 103 90 46 2e-17 MKLTSKQRAFLKKKAHELNPIVRIGKDGLQETVIESILSAIDSRELIKVKILQNCETEKE EIYQQLLEETRFDVVGMIGRTIIVFKENKEKPVVSTELKSL >gi|224531367|gb|GG658185.1| GENE 49 44118 - 45962 2359 614 aa, chain - ## HITS:1 COG:FN1210 KEGG:ns NR:ns ## COG: FN1210 COG0595 # Protein_GI_number: 19704545 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Fusobacterium nucleatum # 34 614 25 608 608 829 72.0 0 MNKLEDGKGGFDNIRKALKNIKSEIDELKSPKKKKTENIKTEIKKNNQKTTKKAVSSKKE DKMFVIPLGGLEEVGKNMTVLQYKDEIIVVDVGAIFPDESLPGVDLVIPDFTFLENNKEK IKGVFITHAHEDHIGAIPYLYEKIGKDIPIYGGKLTMAFVKSKFDNVGLSKKLPKMKEVT GRTKVKVGKYFTVEFVKVTHSITDSYSVSIKTPAGHVFHTGDFKIDLTPVDGDGVDFARL AELGDEGVDLLLSDSTNSEVEGFTPSEKSVGEAFKQEFMKAKGRIIIAVFASHIHRIQQI IDIAVKNHRKIAIDGRSLVKVFEIAPSVGCLNIPEGALVSLAEVDKLKDHKVVILCTGTQ GEPMAALSRIAKNMHKHIKVKEGDTVIISATPIPGNEKAASSNINNLLRFDAEVVFKKIA GIHVSGHGSKEEQKLMLNLIKPKHFMPVHGELRMLKAHMKTAMETGVSKNDILITQNGNK VEVTKNYVKINGKVTAGETLVDGLGIGDIGSAVIKDRQQLSQDGIVVVAYTIERKTGKII AGPEIATRGFVYMKDAEELIKEASDLLETKIPFSEKYLPKEWGLLKNNVKDCAAKFFYNK TKRNPMILPIITEI >gi|224531367|gb|GG658185.1| GENE 50 45955 - 47784 2253 609 aa, chain - ## HITS:1 COG:FN1211 KEGG:ns NR:ns ## COG: FN1211 COG0768 # Protein_GI_number: 19704546 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Fusobacterium nucleatum # 2 594 5 599 657 721 63.0 0 MRRKKSDFFLGVENNSRGKIYLGVIVLFFFILLVRMFYLQVLQGKEYRYLSEKNQFKLKK ITSPRGQIFDSTGKLIVTNGVGYRLVYLRERNNEEEYVNAIADLTGYEKEYILKRIKYGE IFPYTRENVLIEDLEEEKAYKLMEKIVDYPYLEVQAYSKRKYLYDSVAAHSIGYVKKISK KEYELLKEQGYTPRDVVGKEGLEKQYDRELKGEDGYEYIEVNAFNKIQRQMESKEPIPGK NLYLSLNMELQQYMEEQYREEGRAGAFIALDAKTGEIITLVSYPTFSLNMFSSQISQTVW NEIMNDKRRPLGNKAVAGEYPPGSVFKVISALAFLESGIDPKQKYLDANGYYQIGKWKWR AWKRGGHGLVDMKKSLVESANPYYYRLADQVGYKPIAEMAKRFGLGSLTGVDIPGEKMGA IPTPEWKKKKIKASWVKGDSILMSIGQGYDLVTPLQIAKAYSIIANKGYAYSPHLVKYLE DVKTKKREKVVGKRIEVKSVPKAHYDIINEALIATVSQDNGTTRILRNPKYLVAAKSGSA QNSQSKTTHAWVAGYFPANDPEIVFTALLTAAGGGGAVAGGMTKKFMDKYDEMKNPPPKV EKMEETNNE >gi|224531367|gb|GG658185.1| GENE 51 47787 - 48191 284 134 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257453138|ref|ZP_05618437.1| ## NR: gi|257453138|ref|ZP_05618437.1| hypothetical protein F3_08766 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_08076 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 134 1 134 134 149 100.0 9e-35 MWIYLLSFLGIFLENSFFFSGEKVFFFSIPFFSYVLLKKRGNSLIPLLLTILLVSLQGNS YFSFFLYFLCYGVVFYFAFRNMEYNQGTVFYLTIIELGFYSILQNYHWNFLCFMIHAFCF LGLNYYYLKKCYKD >gi|224531367|gb|GG658185.1| GENE 52 48208 - 49170 1348 320 aa, chain - ## HITS:1 COG:no KEGG:FN1213 NR:ns ## KEGG: FN1213 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 10 320 16 327 327 313 55.0 9e-84 MNMRKVYNGVILVLIAILVILLYFNFRGNQISLSEHDRMLFIGKKNLVAVYEDKLAVDIP FEIHTNKEMTFGDLVKKKEYEEVLRKVNDILPEKIEKYAVVKYGEIDYKVKNAKKLPETT IDESRYALASSIYSMFDELYREANTADVLNQNIIVDVLNANGRGGYARKTGELLTQNLSM KYNAANYEKNQEESYIILNDISMDKARDIVMTLPEKYFKIQAKPVVPTLANVVIVLGKEQ NLPFAISIEGSEANIKKAAANLKKAGYKTIKTSTKSGNEKSFIEYRKEDYFIAYKIAKML DIQDMVEKDSLSDKVDIHLQ >gi|224531367|gb|GG658185.1| GENE 53 49148 - 50458 887 436 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 7 421 4 425 451 346 40 3e-94 MNSDKRVAFYTLGCKVNQYESESIKNQLLQKGYEEVDFESIADIYIVNSCTVTSIADRKT RNMLRRAKKQNPSGKVIVTGCYAETNRKDLLEMEEIDFVIGNKDKSAVAKFVQEIHTQER VEKKESIFQEKEYQEYEFATFREMTRAYVKIQDGCNEFCSYCKIPFARGKSRSRKQEKVL EEIDKLLMEGFQEIILIGINLGDYGKDLEGDTSFETLVQEILKRDSLKRVRIGSVYPDRI TDSFISLFKNPKMMPHLHISLQSCDDTVLRNMKRKYGRELILSSLSSLRKEVPSMEYTAD IIVGFPGETEEMFQNTYASLEEIGFSHLHIFPYSDREGTLASRMKNKLSPEIKKERVTIL ENLQKKVEEDRRKAYLGKTIEVLIEEEKDGYWWGYSPNYLRVKVKGEDISVNCLVQVKIE KVEKGVLVAYEYAKSL >gi|224531367|gb|GG658185.1| GENE 54 50445 - 51155 789 236 aa, chain - ## HITS:1 COG:FN1215 KEGG:ns NR:ns ## COG: FN1215 COG1385 # Protein_GI_number: 19704550 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 235 1 234 235 233 56.0 2e-61 MISVIIERNEYLDEIILEKKEDLHHLLHVFRLEIGDKVRAVDGDYEYICEIQKIIENKVH LQILEKREDAFSLSVDIDAAICLIKNDKMDFCIQKLTELGIRSIIPTVAKRCVVKLKEKK EKWNTIVKETMKQCQGVKPTQIQEVTDLKKLPLEDYDLILLPYECEEEHSLKYVLQNRVE KPRKVLYVIGPEGGFEKEEIQYLASKRAEVVSLGKRILRAETAAIVVGGILVHEFG >gi|224531367|gb|GG658185.1| GENE 55 51170 - 51586 412 138 aa, chain - ## HITS:1 COG:FN1216 KEGG:ns NR:ns ## COG: FN1216 COG1959 # Protein_GI_number: 19704551 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Fusobacterium nucleatum # 1 138 1 139 143 186 71.0 8e-48 MKINTKVRYGFKALAYIAMNTEENKLVRIKEIAESQNISIQYLEQILFKLKNEKIIEGKR GPSGGYRLAMSPKEITLHKVYMILDDEVKVIDCNESDEHRQQCKDSICGSTCIWSKLDYA LTKILSDTTLEDFINNVK >gi|224531367|gb|GG658185.1| GENE 56 51576 - 52580 1468 334 aa, chain - ## HITS:1 COG:FN1217 KEGG:ns NR:ns ## COG: FN1217 COG2255 # Protein_GI_number: 19704552 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Fusobacterium nucleatum # 1 331 1 331 332 490 77.0 1e-138 MDRIVSELEIPGEIEIQKNLRPKSFREYIGQESLKEKIFISIQAAKRRGSVIDHVLLYGP PGLGKTTLAGVIANEMGANLKITSGPVLEKAGDLAAILTSLEENDVLFIDEIHRLNTAVE EILYPAMEDKELDIIIGKGPAARSIRIELPNFTLIGATTRAGLLSAPLRDRFGISHKMEY YTEEEVKEIILRGGKILEIEVEGEGAEELAKRSRGTPRIANRLLKRVRDYAEIRGKGIIT QEIAIQALNLLGVDMEGLDDLDRNILQAMFENYGGGPVGIETLSLLLGEDRRTLEEVYEP YLIQKGFLKRTNRGRIATSKAIAYWEKMEEKNEN >gi|224531367|gb|GG658185.1| GENE 57 52604 - 53209 668 201 aa, chain - ## HITS:1 COG:FN1218 KEGG:ns NR:ns ## COG: FN1218 COG4399 # Protein_GI_number: 19704553 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 4 196 3 195 200 181 49.0 7e-46 MLLRLLIMVLIGAWIGWITNWLAIKMLFHPYEEKRFLCFKLQGLIPKRKKDIGSGIARVV EQELLSLKDVLNQMDTELIFQNIERMMDEYLEDNLAKEIQKAFPFAAMFVGKDSLGKIKS LLKQAILSRKEEICSAFTNHLEENVDIQKIISDKIASFSFQKVEEIILSLAKKELKHIEL VGAILGAVIGGLQFLLFSYFS >gi|224531367|gb|GG658185.1| GENE 58 53323 - 53523 474 66 aa, chain - ## HITS:1 COG:no KEGG:Ilyop_1541 NR:ns ## KEGG: Ilyop_1541 # Name: not_defined # Def: domain of unknown function DUF1858 # Organism: I.polytropus # Pathway: not_defined # 1 66 1 66 66 94 69.0 1e-18 MVTKDMNILEAVQNYPIAIEVFQKHGLGCVGCMIASGETLGEGIAAHGLNPDAIVDEINE LIKQGK >gi|224531367|gb|GG658185.1| GENE 59 53676 - 54497 900 273 aa, chain + ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 3 272 6 278 290 162 32.0 6e-40 MNKKILLVNDMPGYGKVALSAMTPILSTMGHSLFNLPTALVSNTLDYGKFEIMDTTEYME KSLQIWEELNFSFDCISTGFIFTKRQVELILQYIEKKKTQGIFVMVDPIMGDQGKLYNGV KEETVDNMRKLSSVADVMVPNFTEACFLARKYVGQKTISLEEVKDLIQLLLSNGAKSIVI TSIETEDNQHYVCGFDSKTQDYFFLPYDHIPIQFPGTGDIFSSILLGNLLHEYSLTESVQ KAMNVVYEFILKNKDNQDKFRGIAIEEGLSLIK >gi|224531367|gb|GG658185.1| GENE 60 54628 - 55017 194 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315918525|ref|ZP_07914765.1| ## NR: gi|315918525|ref|ZP_07914765.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 128 1 128 158 194 100.0 2e-48 MNMKEKKEVKECKEEIDKNKKMILKLLNKNLEGFLLDEIFEEKCKELNERISFLERKLCS LNNVKDFDEEKPRNYFFRLKNDSNHSLNRKLIESFLYEVIIYKDRIEVVFRRFPKGTLDY LDLENMVKG >gi|224531367|gb|GG658185.1| GENE 61 55394 - 55723 368 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467395|ref|ZP_05631706.1| ## NR: gi|257467395|ref|ZP_05631706.1| hypothetical protein FgonA2_08126 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 109 1 109 109 158 100.0 2e-37 MRKLLLICFIMLSIVGCGKKTFSPEEKYERVARYQKLIWKDSLTEDEKKFKEEMDEVVAG LALKADDQDSKEWMAALLKYDEEETRKSIEEFRKEQEAEKTKSKGKISF >gi|224531367|gb|GG658185.1| GENE 62 55849 - 55974 88 41 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467396|ref|ZP_05631707.1| ## NR: gi|257467396|ref|ZP_05631707.1| hypothetical protein FgonA2_08131 [Fusobacterium gonidiaformans ATCC 25563] # 1 41 1 41 41 63 100.0 5e-09 MRLHYNQDGSIQMTLHFKGILIEKTFLGKKEYYQYLQNFSM >gi|224531367|gb|GG658185.1| GENE 63 55971 - 56195 333 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467397|ref|ZP_05631708.1| ## NR: gi|257467397|ref|ZP_05631708.1| hypothetical protein FgonA2_08136 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 74 1 74 74 90 100.0 5e-17 MEKNELFEMIVYHLMEEALKEEEKEIEEIFGELNEEQTLYLSDLRKKYFGLGMDIYISVL NFSKVFRKMAGDVQ >gi|224531367|gb|GG658185.1| GENE 64 56326 - 56502 147 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467398|ref|ZP_05631709.1| ## NR: gi|257467398|ref|ZP_05631709.1| hypothetical protein FgonA2_08141 [Fusobacterium gonidiaformans ATCC 25563] # 1 58 1 58 58 73 100.0 5e-12 MSPRTGRPKLENARNKSLNIRLRQEELDLIQKCAELLKKSRTDTIMEGIRKLKNELEK >gi|224531367|gb|GG658185.1| GENE 65 56879 - 56950 87 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRLLIFFIIVIALFLLLSKNAF >gi|224531367|gb|GG658185.1| GENE 66 57176 - 57337 237 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315918528|ref|ZP_07914768.1| ## NR: gi|315918528|ref|ZP_07914768.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 53 12 64 64 67 100.0 2e-10 MNYIQSEDKKEVHILLEEKSKIWEERDFLETLKGIFRPKENNENQYKDELSEN >gi|224531367|gb|GG658185.1| GENE 67 57545 - 57838 394 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467400|ref|ZP_05631711.1| ## NR: gi|257467400|ref|ZP_05631711.1| hypothetical protein FgonA2_08151 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 97 1 97 97 159 100.0 7e-38 MGLFGKKESKPFVSNNGLVEIVHDSAAYKEGISEKGYEALEKQLERRFLYRNVDSVISTG SSSTVIVKYKDLKVRSEFEVKKIREEMEREAGLDLGR >gi|224531367|gb|GG658185.1| GENE 68 58472 - 58669 186 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467330|ref|ZP_05631641.1| ## NR: gi|257467330|ref|ZP_05631641.1| long-chain-fatty-acid--CoA ligase [Fusobacterium gonidiaformans ATCC 25563] long-chain-fatty-acid-CoA ligase [Fusobacterium gonidiaformans ATCC 25563] long-chain-fatty-acid-CoA ligase [Fusobacterium gonidiaformans ATCC 25563] # 1 64 1 64 422 131 95.0 2e-29 MRTSIPEEIRLCQRIIEYAIKHNNNAKAAIRYHTSCQQVKHWRDRYDGTIQSLLPKSRRP KSHPN >gi|224531367|gb|GG658185.1| GENE 69 58756 - 59202 198 148 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1448 NR:ns ## KEGG: Lebu_1448 # Name: not_defined # Def: phosphoesterase PA-phosphatase related # Organism: L.buccalis # Pathway: not_defined # 7 143 93 230 263 124 52.0 1e-27 MLLFFLLFLYDKKKFKVCKEYALSLILVLCSTQVVVNILKLTFGRARPYVFFDPERFYGI FYLIDNHLLMNSQYHSFPSGHTITIWGTVWFFYFVMKSKYKYLWFFLGFLVALSRMYLGY HWFSDVTVSIGLSYVIVKWIVTKRSVMR >gi|224531367|gb|GG658185.1| GENE 70 59133 - 59402 207 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467403|ref|ZP_05631714.1| ## NR: gi|257467403|ref|ZP_05631714.1| hypothetical protein FgonA2_08168 [Fusobacterium gonidiaformans ATCC 25563] # 1 89 1 89 89 149 100.0 1e-34 MMNVSNVMEKVLLLIYRLDTFFFRSFCHEAPVARKTNVLYPYFQEEKLDKFFHAVTHFGE GYLEFFWCCYSFSYFYMIKRSLRYAKNML >gi|224531367|gb|GG658185.1| GENE 71 59481 - 60407 1167 308 aa, chain - ## HITS:1 COG:FN0920 KEGG:ns NR:ns ## COG: FN0920 COG0501 # Protein_GI_number: 19704255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Fusobacterium nucleatum # 1 305 1 305 309 446 72.0 1e-125 MYGLSQIRNKQIQVPHLNIFKIGTWVMMGIFASYLMIYLFLGQEILNYFPLLLLFAFATP LFSLWMSKASVKRAYHIRLIGEGGARNEKEQLVVDTIQLLSEKLKLQKLPEIGVYPSYDV NAFATGASKNSALVAVSQGLLQTMDETEIIGVLAHEMSHVVNGDMLTSSILEGFVSAFAL IATIPFLFGRSDNNRGERAGSSLMTYYLLRNIANFFGKLVSSAYSRRREYGADRLASKIT GAVYMKSALMKLQDISQGRVNLQAEDRRFANFKITNNFSMGGIANLFASHPSLENRIEAV ERLEQQGW >gi|224531367|gb|GG658185.1| GENE 72 60499 - 60783 481 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237736458|ref|ZP_04566939.1| LSU ribosomal protein L27P [Fusobacterium mortiferum ATCC 9817] # 1 94 1 94 94 189 96 3e-47 MKFILNIQLFAHKKGQGSVKNGRDSNPKYLGVKKYDGEVVKAGNIIVRQRGTAFHPGNNM GMGKDHTLFALIDGYVKFERLGKDKKQVSIYASK >gi|224531367|gb|GG658185.1| GENE 73 60784 - 61119 269 111 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237742036|ref|ZP_04572517.1| 50S ribosomal protein L27 [Fusobacterium sp. 4_1_13] # 1 111 1 109 109 108 49 1e-22 MIRVTVVRKNGNITGYYAKGHAEYADLGNDIVCAAVSTVMQNPLAGIQEVLGLNPQYGFD DDGYITVTLDRMNFQGKEKEVSSLLETMVVMIRELERNYPKNIKLVEKEEK >gi|224531367|gb|GG658185.1| GENE 74 61132 - 61509 449 125 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237736456|ref|ZP_04566937.1| LSU ribosomal protein L21P [Fusobacterium mortiferum ATCC 9817] # 23 125 1 103 103 177 87 2e-43 MDYAWKRSSATLPATNTFGGVRMYAVIKTGGKQYKVAEGQVLRVEKLNAEVNETVELQEV LLVADGENVKVGTPVVEGAKVVAEILAQGKGAKVINFKYKPKKASHRKKGHRQLFTEIKV TSIQA >gi|224531367|gb|GG658185.1| GENE 75 61554 - 62858 1607 434 aa, chain - ## HITS:1 COG:FN0621 KEGG:ns NR:ns ## COG: FN0621 COG0427 # Protein_GI_number: 19703956 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Fusobacterium nucleatum # 1 434 1 434 434 540 60.0 1e-153 MTHWKGLYQERLCSAEQAVKSIPNNCRVVPSHAAGEPKHLVEAMMANREQYHNVDIFSMV NLGHAAYGKEEEKEHFHVNAAYASASTREVVNAEHGDFTPCFFYQVPELLKKDGPMPADV ALIQVSLPDEHGYCSLGVSSDYTKEAAENAKIVIAQVNKYMPRTLGNNFVHVSKMTHIVE YDEPIHILNPPFVGETERKIGEYCASLIQDGDTLQLGIGAIPDAVLSFLTDKKHLGIHSE MISDGVVDLIEAGVIDNSRKNFNPGKSIVSFLMGTEKLYNYVHNNPALEMHPVDYVNHPI IAAQNDNLVSINSALQVDLMGQANSETLGHKQFTGIGGQVDFVRAASMSKGGRTIIAMPS TAAKGKISKIVFLLDEGAAVTTSRTDIDYVITEYGIAKLRGKSLRARAKALIEIAHPDFR EGLREQALQKFGRL >gi|224531367|gb|GG658185.1| GENE 76 62912 - 64270 1472 452 aa, chain - ## HITS:1 COG:FN1789 KEGG:ns NR:ns ## COG: FN1789 COG0534 # Protein_GI_number: 19705094 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 4 450 12 458 459 399 49.0 1e-111 MGKDKKEFYSMVWKLVLPMAIQNVVNVAVISTDVIMLSKVGEKVLAGASLASQLQFIMTL ICFGITSGATILTAQYWGKGDKRTVEKILGLSLKLSLIVSFFFFVLATFFPKFSMEIFSK DPAVIEEGVKYLSIVGFSYLLTAVTIVYLNILRSVEKVFIATLVYTVSLGTNIIVNAILI FGLLGFPKMGIVGAAIGTLVARLVEIIMVAIYAKKNETLLRLHLQDIFKVSRILWKDYFH YATPVIFNELCWGAGIAANAAILGHLGSSMVAASSVTQILRQLSAVVTFGIANAAAILIG KTIGEKRYDLAQNYAKRLIRLSIISCSIGSLLIFCISPWVVKHFAVTPEIQDYLSYMLKI IVLYIIAQGISVVFIVGIFRAGGDSRYGLFVDFSTMWLGSILLGFIGAFILHLPVKIVYL LLMCDEFLKVPMVIKRYKKRKWLKNVTRDFIS >gi|224531367|gb|GG658185.1| GENE 77 64272 - 64748 707 158 aa, chain - ## HITS:1 COG:FN1788 KEGG:ns NR:ns ## COG: FN1788 COG0245 # Protein_GI_number: 19705093 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Fusobacterium nucleatum # 1 158 1 158 160 213 66.0 2e-55 MFRIGNGYDVHVLTEGRKLILGGVEIPHTKGVLGHSDGDVLIHAIMDALLGALSLGDIGL HFPDTEEEYRGISSLLLLKKIKELVQEKGYRVGNIDATIALQKPKLRPYIDTMREKIANI LEIDVDRVSIKATTEEKLGFTGREEGIKAYAVTLLEKE >gi|224531367|gb|GG658185.1| GENE 78 64759 - 65733 1212 324 aa, chain - ## HITS:1 COG:FN1786 KEGG:ns NR:ns ## COG: FN1786 COG2870 # Protein_GI_number: 19705091 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Fusobacterium nucleatum # 7 323 4 320 323 382 61.0 1e-106 MRRKDWITKITENFQKVKIAVLGDLMLDDYIIGKVERISPEAPVPVVNVEEEKFVLGGAA NVVNNLSNLGAEVYCLGVIGTGHNSKRLLSAFDKKVHIDGIIRSEERPTIVKKRVLSGNH QLLRLDWEDSTAISKKLEDELLERFVKISSEIDAIILSDYNKGVLTSRVSKEIIRICREK NIIVTVDPKPINIDNYCGASSITPNRKEAYQCAGVSTSYSIEALGMDLRKKYELETVLIT RSEEGMSLYQEDIYTVPTFAKEVYDVTGAGDTVISVFTLSKVAGASWQEAAEIANTAAGV VVGKVGTSTVSIEEIQREYCRIYE >gi|224531367|gb|GG658185.1| GENE 79 65807 - 66325 804 172 aa, chain - ## HITS:1 COG:FN1790 KEGG:ns NR:ns ## COG: FN1790 COG2109 # Protein_GI_number: 19705095 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Fusobacterium nucleatum # 2 172 3 173 173 192 61.0 2e-49 MKSYVQIYTGNGKGKTTASLGLAVRALGNGWKVLLCQFMKGQNYGELRTLATFPNMTIRR FGTGNFIRKIENVQEIDKKLAREGYSFLKEVIQSGEYSLVIADEIFVARRFGLVSSEEIL SLIQLKSENTELVLTGRHAPDEIIEKADLVTEMCEVKHYFKQGVKAREGIER >gi|224531367|gb|GG658185.1| GENE 80 66521 - 66757 175 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467413|ref|ZP_05631724.1| ## NR: gi|257467413|ref|ZP_05631724.1| hypothetical protein FgonA2_08218 [Fusobacterium gonidiaformans ATCC 25563] # 1 78 1 78 78 76 100.0 6e-13 MNHFYIKLLNFFFYKVPIFIGITFLVYLTSNFLLWVFDSKISQNKKEKYIKIKKWTFLCF LLFSIVFVLFWLGVFALG >gi|224531367|gb|GG658185.1| GENE 81 66983 - 67045 61 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTVLIVISVIITLYIIFQDT >gi|224531367|gb|GG658185.1| GENE 82 67256 - 67486 377 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467415|ref|ZP_05631726.1| ## NR: gi|257467415|ref|ZP_05631726.1| hypothetical protein FgonA2_08228 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 76 1 76 76 93 100.0 5e-18 MSVVSLRLNEKEEKVLKEFAGFENIGISTYIKKVLFEKLEEEYELKLFDSLWNEHIQSGG ETVTLEEVAKENGIKL >gi|224531367|gb|GG658185.1| GENE 83 67483 - 67749 235 88 aa, chain + ## HITS:1 COG:FN0211 KEGG:ns NR:ns ## COG: FN0211 COG2026 # Protein_GI_number: 19703556 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Fusobacterium nucleatum # 1 87 1 87 88 101 58.0 3e-22 MKYQVEFTKTASKKFQKLDSSIKKILLSWITKNLQNCSNPRVFGKALKGNLSDKWRYRVG DYRIMARIEDSKIIIIIVDIGHRKDIYE >gi|224531367|gb|GG658185.1| GENE 84 67850 - 67960 105 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISLAIIGCGIVGFFVSPFIGIALVCYGLFRNPYKK >gi|224531367|gb|GG658185.1| GENE 85 68251 - 68439 178 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVEVAGIEPASEIKVTISFYKLSLLLYFADVTPANRANKSYSLKFPFCLEKSQKVICIWV TP >gi|224531367|gb|GG658185.1| GENE 86 68775 - 69524 1357 249 aa, chain + ## HITS:1 COG:FN1661 KEGG:ns NR:ns ## COG: FN1661 COG0217 # Protein_GI_number: 19704982 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 249 1 249 249 394 83.0 1e-110 MSGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGGDPNFNPRLRLAIEKAKAGN MPKDILERAIKKGTGELEGVDFTEIRYEGYGPAGTAFIVDVVTDNKNRSASEVRTVFSRK GGNLGADGAVSWMFKKLGIIEVASEGLDLDEFMMAALEAGAEDVTDEGETFEVVTDYTQL QTVAENLKAAGYTYTEAEISMVPDNKVEITDLETAKKVMLLFDSLDDLDDVQEVYSNFDI PEELLEQLD >gi|224531367|gb|GG658185.1| GENE 87 69563 - 71602 2457 679 aa, chain + ## HITS:1 COG:FN1660 KEGG:ns NR:ns ## COG: FN1660 COG1200 # Protein_GI_number: 19704981 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Fusobacterium nucleatum # 10 674 18 684 689 792 62.0 0 MEQYHSTLYQVLDSKKYKGLKTLGIMTVHDLLYYFPRAYDNRSNIKKIAELRMEEYAVIH AKLLHVYSVPTKLGRKMTKATATDGSGFLEIVWFGMPYLKKSLKLQEEYIFVGTVKRSMG AFQMTNPEFKLSKGQKMRGEILPIYSSHKNLSQNRLRKYLKEILFENSLLSENIPKEICQ KYNILGRNQALSEIHFPSSEKILEEAKRRFAIEELLIIEMGILKNRFLTDALTQSFYHLE GKKTLVKQYLSSLPFQLTKAQKKVITEIYKDLEQGRIVNRLVQGDVGSGKTMVAMVLLLY MIENGYQGALMAPTEILAIQHYLGIYSKMQELGLRVELLTGSIRGKKRRKLLDDLKEGNI DLLIGTHALLEEEVRFHQLGFIVIDEQHRFGVLQRKKLREKGILTNLLVMTATPIPRSLA LSIYGDLDVSILDELPPGRSPIKTKWISTEEDMEKMYAFIRKQLSQGKQAYFVAPLIEES EKLLLSSILEVEEEVKEKLPNYKIALLHGRMKNIEKDEIMQRFKQREIDILVSTTVIEVG IDVPNAVIMTILNAERFGLSALHQLRGRVGRGKDASFCFLISKTQNETSKQRLEIMEATQ DGFIIAEEDLKMRNAGEIFGLRQSGLSDLRFIDLLHDVKTIKLVRDECMEYLRKNQGKIL LPSLEEDIFQKFKDSVQKD >gi|224531367|gb|GG658185.1| GENE 88 71658 - 73367 2152 569 aa, chain + ## HITS:1 COG:FN1658 KEGG:ns NR:ns ## COG: FN1658 COG0442 # Protein_GI_number: 19704979 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 569 1 567 567 865 75.0 0 MRFSKAYIKTLKETPKEAEIISHQLLLRAGMIKKLASGLYTYLPLGFRTLKKVENIIREE MDRAGSQELLMPVLQPAELWQESGRWNVMGEEMVRLKDRHQRDFVLGPTNEEVITDIVRN DISSYKSLPINLYHIQTKVRDERRPRFGLMRSREFIMKDAYSFHTSQESLDEEFENMKNT YTRIFERCGLKFRPVEADSGAIGGSGSQEFHVLAESGEDEIIYSDGCSYAANVETAISKI ENPPKEEEKEVELVSTPNASSIEELSQFLNVPKYKTVKAMMYKDLGTDTFAMVLIRGDFE VNEVKLKNALNAIAIELAKDEEIEALGLTKGYIGPYALQNKNFTIIVDPTVLEVSNHILG GNQKDSHYINVNYGRDYTADMVKDIRLVKAGEDCPRSNGKLHSARGIECGHIFKLGDKYS KALGASYLDEKGESKIMLMGCYGIGVGRTMAAAIEQNYDEHGIIWPSALAPYLVDVIPAN IKNAEQMQLAEKIYEQLNAEHLDAMLDDRDERPGFKFKDADLIGFPFKVICGKKAAENIV ELKIRKTGETFEIPVDEIISKIKDLEKQY >gi|224531367|gb|GG658185.1| GENE 89 73434 - 74921 1653 495 aa, chain + ## HITS:1 COG:FN0061 KEGG:ns NR:ns ## COG: FN0061 COG2317 # Protein_GI_number: 19703413 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent carboxypeptidase # Organism: Fusobacterium nucleatum # 6 495 3 495 496 543 57.0 1e-154 MKDKIQEFKECIKEKKYLLASIEVLQWELETLAPKKGQDYLSEVLAYMSMKDYELSTSDK FQNLVRDLLQEKESLDPILQKEVEQAAEEMEKMKKIPAEEYRAYAELCAKNQGVWEEAKQ NNNFQLVEENLTKIFEYNRKFARYLQKEEKNLYDVLLRDYEKGMTCEKLDVFFASLKKEI VPLLHKIQKKKKQSFPFLTSPISKEKQKEFCHLLAEYLGFDFERGILAESEHPFTLNINK KDVRITTKYMESLPFSSIFSTIHETGHAIYEQQIGDELVSTLLGSGGSMGLHESQSRFWE NIIGRSFEFWKELYPSLQTHFTSLKTIPLEEFYQAINQVEASLIRTEADELTYCLHIMLR YELEKEMIEGTLSVKDLPKAWNEKIEEYLGITVPNATEGVLQDVHWYAGLIGYFPSYALG NAYASQLFHTMKQELSLDDYSQDKLQEVRLWLGENIHQYGMMKTTSELIREITGEDLNPD YYIEYLKNKYEALYQ >gi|224531367|gb|GG658185.1| GENE 90 74940 - 76712 1705 590 aa, chain + ## HITS:1 COG:FN1127 KEGG:ns NR:ns ## COG: FN1127 COG4907 # Protein_GI_number: 19704462 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 26 529 27 544 606 344 39.0 3e-94 MKKIFSLLFFICFSLVLFSSDFEITNLNITAKLEENASMKVREEVQYRIGEINGVLFDLD AKGNGPLTSLAVYATDENGNFEKVPQTNLEITEEDELYHIKVYARTVNQIRTFAFVYELQ GGAKLYQDIAELNRVFVGKNWQSPIGQVQVKVLLPNTVPQDSIHAYGHGPLTGNISLEDN TISYNLEQYYPGDFVEAHILFGPQGLSGVPQDLLVKENAKDRLLAQEKAWAEEANAERER YQKLEKHGKFAFGIEAFCLALYFLFAKFILRKPKKLEQEFPEYFRELPTDDSPAIVGNFF QAENSEKIFATIMDLVRRKYLNLELRGAEQILTINTEKNKTENLTPYEKEIIEIYLHQIG SRSEVNLSTISKQKLSLSISQRILGWNSLVKREYTAKGYGDSRSPLIILGVFCCFLFLGL SIVAISVFEQVQFAFFIPVIFAFLLPYTFNSKFPNAKTTESMQKWKAFKKFLEDYSLLKE AKINSIYLWEHYFVYALVLGVADKVAKAYQLALEKGEILMPESRSSLHYYAPCLHSYIRQ PSLHQNIQKTYQRSHQSIARSTRSSSIGRGGGFSGGSSGGGGSRGGGGAF >gi|224531367|gb|GG658185.1| GENE 91 76734 - 77276 723 180 aa, chain + ## HITS:1 COG:FN1125 KEGG:ns NR:ns ## COG: FN1125 COG1704 # Protein_GI_number: 19704460 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 15 180 18 183 183 204 64.0 1e-52 MITIFIIIIVVCFIAISFKNKFVVLLSRVKNAWSQIDVQLQRRFDLIPNLVETVKGYAAH EKGTLEAVIAARNQYVSAGNVQEKMEASNQLTGVLRQLFAVSEAYPDLKANTNFLQLQEQ LKEVEDKVAYARQFYNDTVTKYNQSIQLFPASLFAGLFHYVEEPLFQAVAGSQEVPKVKF >gi|224531367|gb|GG658185.1| GENE 92 77293 - 78477 1820 394 aa, chain + ## HITS:1 COG:SA1524 KEGG:ns NR:ns ## COG: SA1524 COG0281 # Protein_GI_number: 15927279 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Staphylococcus aureus N315 # 6 393 5 390 409 433 57.0 1e-121 MSNVYEESLKLHEANHGKLSVVSKVTVKSREDLSLAYSPGVAEPCRKIQENKENVYRYTS RGNMVAVITDGTAVLGLGDIGPEAALPVMEGKAVLFKEFGGVDAFPICLDTKDTEEIITT IKRIAPGFGGINLEDISAPRCVEIETRLKEELDIPVFHDDQHGTAIVVVAGLINSLKLLK KNVEEIKVVINGIGAAGSSIAKLILQLGVPGKNMLLVGKDGILNREQSENYNHIHKELSF RTNDACQTGTLKDAIQGADVFVGVSVGGIVSAEMIESMNHDAIVFAMANPTPEIMPEEAK KAGARIVGSGRSDYPNQINNVLVFPGLFKGALRAKSKKITEEMKMAAAVGLANLITEEEL KDDYIIPGAFDSRVAETVAKEVEKVAKAQGICRE >gi|224531367|gb|GG658185.1| GENE 93 78499 - 79278 1124 259 aa, chain + ## HITS:1 COG:FN0900 KEGG:ns NR:ns ## COG: FN0900 COG1235 # Protein_GI_number: 19704235 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Fusobacterium nucleatum # 1 257 1 257 260 327 60.0 1e-89 MKVAMLGSGSGGNASYVEENGYGILIDAGFSCKKIEERLASIGKSAENIKALLITHEHTD HISGAGILARKYNLPIYISPESLEVCRQKLGKIAEDQIHCIQKDFFLNENIYVKPFDVMH DAVRTLGFHIETASQKKLAISTDIGYITNLVREAFQDVDVAILESNYDYNMLMNCSYPWD LKARVKGRNGHLSNNDAAKFIREMYTNKLQKIFLAHVSKDSNHPNIIHDTMELEFEKYSQ KPNYEISSQNIATKLFESK >gi|224531367|gb|GG658185.1| GENE 94 79288 - 79863 636 191 aa, chain + ## HITS:1 COG:FN0901 KEGG:ns NR:ns ## COG: FN0901 COG1573 # Protein_GI_number: 19704236 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Fusobacterium nucleatum # 1 188 1 188 195 156 46.0 2e-38 MLEKNDLWEELKYGAASIGNTILKPHQLEVLIGGGNPDSDILILGDDPELYLNENLKTKE GSSGEFLYLLLEFCGIQKEDIYVSTLSKRNARLKDFMPEDYEKLKELLICQIGLLSPKVI VCLGYEAAQMLLEKEINLEKDRQEVFTWKAGIQVFVTYDVNTVKKARAELGKKAKLALEF RNDLKKLQYFK >gi|224531367|gb|GG658185.1| GENE 95 79932 - 80780 1508 282 aa, chain - ## HITS:1 COG:FN1463 KEGG:ns NR:ns ## COG: FN1463 COG0214 # Protein_GI_number: 19704795 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Fusobacterium nucleatum # 3 282 1 280 280 466 89.0 1e-131 MDMITKFNGGVIMDVTNVEQAKIAEEAGAVAVMALERVPADIRAAGGVSRMSDPKMIKEI MAAVKIPVMAKVRIGHFVEAEILEAIGIDFIDESEVLSPADNVYHVNKNEFKTPFVCGAR NLGEALRRICEGAKMIRTKGEAGTGDVVQAVSHMRQIMKEMNIVKSLREDELYVMAKDLQ VPYELVKYVHDHGRLPVPNFSAGGVATPADAALMRRLGADGVFVGSGIFKSGDPRKRAKA IVEAVQNYNNPEVIARVSENLGEAMVGINEEEIKVIMAARGV >gi|224531367|gb|GG658185.1| GENE 96 80881 - 82269 1274 462 aa, chain + ## HITS:1 COG:FN1462 KEGG:ns NR:ns ## COG: FN1462 COG1167 # Protein_GI_number: 19704794 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Fusobacterium nucleatum # 1 449 1 456 469 532 60.0 1e-151 MMIFPLDNNSKTPLYIQMYSEIKKQIQDGSLHSNEKLPSKKHFMEQYHISQNTVQNALYL LLEEGYLYSIERRGYFVSNLENIFTKSLPSKTVQKENNISKVKYDFAYSGVDVQSIPKTI LKKITRDIYDEQNTELLFQGDIQGYLPLRESICQYLENSRGFSVSSNQIIISSGTEYLFY IIFKIFDQKIYGLENPGYKMLQELFTSNQIEFHPIPLDESGIQVEELEKQKVQIACITPS HQFPSGIIMPIRRRNELLQWANSSEERYIVEDDYDSEFKYNGRPIPALKAIDQKDKVIYM GSFSKSISPALRVSYMVLPKNLLTVYEKKLPYFICPVSTLSQKILHKFISEGYFIKHLNR MRTLYKQKREFIVQSFKKTNITILGADAGLHLLLSFPPSFPESKFLADCKKHSIRLYPIR EYYFQENITTNPIFLLGYASLEKKQIQEGISLLLKILESNQE >gi|224531367|gb|GG658185.1| GENE 97 82369 - 83052 689 227 aa, chain + ## HITS:1 COG:CAC1700 KEGG:ns NR:ns ## COG: CAC1700 COG0745 # Protein_GI_number: 15894977 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 2 226 3 227 232 200 47.0 2e-51 MGEKILIIDDEEAILELLKFNLEIYGYKIFTSNTGKGILEKIIEIHPNIILLDLMLPEID GMSICKKVRENSIWNDLRIIILSAKSQEIDKITCLEIGADDYITKPFSIRELIARIHAFS RRISPTVPTTQEIIQYHDLVIDPKEKTVLKKDKKISLTLLELKLLLYLLKNQGKISTREM IFKNVWNYEEQNNTRSLDVNIRKLRQKLEDSNNHYIETIRGIGYKLL >gi|224531367|gb|GG658185.1| GENE 98 83074 - 84807 731 577 aa, chain + ## HITS:1 COG:BH3156 KEGG:ns NR:ns ## COG: BH3156 COG0642 # Protein_GI_number: 15615718 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 2 569 5 577 589 193 26.0 6e-49 MKKKILLICFTLILSSIFTVSIIFYNMMKHNYIESILANANSNIQLIHLILAENKYADKY LFKLSQSLSQKTGFRVTFIRTDGIPLADSNDNSILFENFQSLPSFQIAKKNITSHYVKKQ PLTTIPEIKIFTKLHFYNKKSTILMLSKKLTFLEEFQKNFFLAILTGIFISSILSVFLSL YFTAWATKPILQLTNAVREISQGNFCPKLLLRSHDELEELAKNFYNMNQKIKILLQDIQN KVNNLQNILDNLSEGILLLDIQGNVILMNKFAEFEFEISNSTHNFFSYSNFSFCHKEIQQ SLLNKQTFELKKRIGKKIYKLHNHFMEENKQMILVIQNITQLEQNEELRREFVSNASHEL KTPLTIISGFIETIKLGHVQEKQQLEHILNIIDLESKRLNKLVNNLLHLSHLEKNVEQTN KKIYRVSLYRTIPQIKNLYQPLLEEKDIALDISIANDFIESHISEEFLHIVLGNLLENAI KYSKIHSNIILFSKIDNRKLYFKIQDFGCGIAKDEQEKIFQRFYRVDPSRNNKIKGNGLG LSIVKKMIENVNGNISVESELQKGTTFLITIPITEKS >gi|224531367|gb|GG658185.1| GENE 99 84819 - 86297 2087 492 aa, chain - ## HITS:1 COG:FN2105 KEGG:ns NR:ns ## COG: FN2105 COG3333 # Protein_GI_number: 19705395 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 492 1 492 494 660 83.0 0 MSDILFGFVTALAPVNLLAACLSVSIGIIIGALPGLSAAMGVALLIPITFGMPASTGLIV LAGVYCGAIFGGSISAILIRTPGTPAAAATAIDGYELTLKGKAGKALGTAVIASFIGGIL SSISLYLFAPTLATLALKFGPAEYFWLSIFGLTIIAGASTKSITKGLISGAIGLMLSTIG MDPMLGNPRFTLGIPSLLSGIPFTASLIGLFSMSQVLMLAEKKIKESGNLVHFEDKILLT KEELLRILPTALRSTVIGNLIGILPGAGASIAAFLGYNEAKRFSKHKEEFGHGSIEGIAG SEAANNAVTGGSLIPTFTLGIPGESVTAVLLGGLLIQGLQPGPDLFTIHGKITYTFFAGF IIVNIFMLILGLTGSKIFAKISRVPDTYLIPIIFSLSVIGSYAIHNQMADVMIMFVFGFI GYVVNKLELNSASIVLALILGPIGESGLRRSIILNHGKLDILFKSPVSIFLIVCTILSLF SPMIMKKLQKRS >gi|224531367|gb|GG658185.1| GENE 100 86310 - 86741 540 143 aa, chain - ## HITS:1 COG:no KEGG:FN2104 NR:ns ## KEGG: FN2104 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 1 143 1 147 147 108 53.0 7e-23 MIKYDRILTIGLIILEALYFCMIKSLPEKAAKYPLFVLALLIILTIALGIKSFTTKIEKE KSEIFQGFQGKQFIFIVVLSAIYIFGIEKIGFFISSFVYLIVIMVGLKSNIKWAVISSIV FCLLIYSIFVVFLKVPVPNGILI >gi|224531367|gb|GG658185.1| GENE 101 86752 - 87735 1324 327 aa, chain - ## HITS:1 COG:FN2103 KEGG:ns NR:ns ## COG: FN2103 COG3181 # Protein_GI_number: 19705393 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 21 327 2 307 308 450 74.0 1e-126 MKSKFLKVFSSVVMGAVLLSACGTDKSKAENGGDKYPSKPVNVIVAYKAGGGTDVGARIL VSEAQKSFPQPFVIVNKPGADGEIGYTELLKSEADGYTIGFINLPTFVSIPLQRKTNFQK DDAQAIMNHVYDPGVLVVREDSKWKNLEEFVEDAKQNPDALTISNNGTGASNHIGAAHFA YEAGIKVTHVPFGGSTDMIAALRGSHVDATVAKISEVASLVKNKELRILGTFTDERLEGF EDVPTLKEKGYNVLFGSARALVAPKGTPEEIIQYLHDTFKTALESPENIEKSNNANLPLK YMSGEELTNYINEQDQYIKEMVPKLGI >gi|224531367|gb|GG658185.1| GENE 102 88017 - 88805 196 262 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 14 235 1 227 245 80 25 4e-14 MDCKKELFLWGERMIEVKNLSYHKDNKDILKNISLSFQENCITGILGANGSGKTTLLRHL IRELPSHNAIYIGGKEINQISKKDFAKKISFISQNTMYIPEMTIEDIVMMGRYPYKKLFS SYSKEDKKKVEESLLLFNLENLRQKAIGSVSGGEAKRAFIARAFAQNTEILILDEPINHL DIKHQLALLKLFHKLKEKTIILSIHNLEFALKFCDQIILMKDGKVIEMGKTEAVFSAQKI LEVFEVEVEVKKIADEKVIMYR >gi|224531367|gb|GG658185.1| GENE 103 88763 - 89797 853 344 aa, chain - ## HITS:1 COG:FN0884 KEGG:ns NR:ns ## COG: FN0884 COG0609 # Protein_GI_number: 19704219 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 20 342 25 344 345 235 44.0 9e-62 MNKKWKITLLCIASLLIPIFCIGFGSIKIDNKWVVQIVMNHVLGKEYFVCKWERTLETIV WDLRFPRILLAFLTGAALSLVGVIMQTITKNNLAEPYILGISSGASAGAVSVIILSGTYP ILQKISIEQGAFLGSLLSISMVFFISSRHLTRGSSLILTGVGVSSFFSAMTTVIIYSSKN NSQLVTAMFWMTGSLSSAAWESLFYPFLIFLFFTILVYLYSHELDILLMGDTDANTLGVH TQFLKFIMIGISTLLISILVSLTGIIGFIGLVIPHIARKIIGYQHRTLVIFSTLLGGNFL VVADTFARSYFSPEEMPIGVITAFIGTPIFLWIVRRNYSYGGRE >gi|224531367|gb|GG658185.1| GENE 104 89790 - 90722 1101 310 aa, chain - ## HITS:1 COG:FN0885 KEGG:ns NR:ns ## COG: FN0885 COG0614 # Protein_GI_number: 19704220 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 36 308 18 283 286 179 38.0 6e-45 MKKITAILFMILSTTILAFTNMQEINGVKYQFDFNEAPKRAVSISQFTTEIMLKLGLEKQ MIGTAFLEEEIYPSVASSYRKVPVLAEKWPSLEQLLSKNPDFVTGWEVAFKKGVDSKMIH RSHINMFVPKSSIEFNADLNTLFDDYKMFGKIFHKEKEVEKYIATEKARVEKIKKEVKNK QEFTYFLYDSGTDKAFTVFEGFTTNLLKLVHGKNILSGKGVQKTWGETSWETVIAENPDY FIIVDYSVGIREETDSDSKIKAIKANPKLKNLKAVKNNKFIRVKLAEIVPGIRNVDFFER VAKEVYKIHE Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:16:42 2011 Seq name: gi|224531366|gb|GG658186.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.8, whole genome shotgun sequence Length of sequence - 10227 bp Number of predicted genes - 14, with homology - 14 Number of transcription units - 2, operones - 2 average op.length - 7.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 185 - 244 14.1 1 1 Op 1 . + CDS 416 - 982 570 ## FN2097 hypothetical protein 2 1 Op 2 . + CDS 967 - 1137 156 ## gi|257453308|ref|ZP_05618607.1| hypothetical protein F3_09620 3 1 Op 3 24/0.000 + CDS 1139 - 2602 904 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 4 1 Op 4 10/0.000 + CDS 2653 - 3774 549 ## COG1459 Type II secretory pathway, component PulF 5 1 Op 5 . + CDS 3784 - 4257 567 ## COG2165 Type II secretory pathway, pseudopilin PulG 6 1 Op 6 . + CDS 4242 - 4688 272 ## gi|257453312|ref|ZP_05618611.1| integral membrane protein + Prom 4696 - 4755 6.6 7 2 Op 1 . + CDS 4778 - 5071 321 ## gi|315918567|ref|ZP_07914807.1| predicted protein 8 2 Op 2 . + CDS 4974 - 5624 385 ## gi|315918568|ref|ZP_07914808.1| predicted protein 9 2 Op 3 . + CDS 5596 - 6117 537 ## gi|257453315|ref|ZP_05618614.1| hypothetical protein F3_09655 10 2 Op 4 . + CDS 6114 - 7241 684 ## gi|257453316|ref|ZP_05618615.1| hypothetical protein F3_09660 11 2 Op 5 . + CDS 7231 - 7824 338 ## gi|257467447|ref|ZP_05631758.1| hypothetical protein FgonA2_08388 12 2 Op 6 . + CDS 7751 - 9052 1150 ## COG1450 Type II secretory pathway, component PulD 13 2 Op 7 . + CDS 9081 - 9659 607 ## gi|257467449|ref|ZP_05631760.1| hypothetical protein FgonA2_08398 14 2 Op 8 . + CDS 9706 - 10155 276 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 Predicted protein(s) >gi|224531366|gb|GG658186.1| GENE 1 416 - 982 570 188 aa, chain + ## HITS:1 COG:no KEGG:FN2097 NR:ns ## KEGG: FN2097 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 85 188 31 134 134 66 38.0 5e-10 MKKINKGGFSLLEVCVSALLVMIVIQISTSLYRNYQEHLDLQLAKIKISKLFYLYSMKSF YQRKAYYFTISDIEKTIEVKNSFFLLENKVVLPNHLSYYLTSNSVLDQKYGHLTRNGNIS PSFSIYLFGYQGFVKDKITFSSFEETKILRLRQYHKIKGKSVDMENIQKYHLETNKNRKL FYQEWREE >gi|224531366|gb|GG658186.1| GENE 2 967 - 1137 156 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257453308|ref|ZP_05618607.1| ## NR: gi|257453308|ref|ZP_05618607.1| hypothetical protein F3_09620 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_08343 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 5 56 1 52 52 90 100.0 3e-17 MERRMKNIYQWINILFLCIVFEEKIPVIFHMKDSISRSSLLFYQEKGERKIILLGE >gi|224531366|gb|GG658186.1| GENE 3 1139 - 2602 904 487 aa, chain + ## HITS:1 COG:VC2732 KEGG:ns NR:ns ## COG: VC2732 COG2804 # Protein_GI_number: 15642726 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Vibrio cholerae # 50 484 50 497 503 325 39.0 2e-88 MKKYFLDFIYFQKDCLQLFFFETVKKELQSLILPVARENQKLLRLEKLFAFYETENSIYY IVKDIEEMQADDEPKEKQIMYYVISQYLYEFYFQYFQIYYKNFSFVNTKEKQLSTQTIHM LLEIAVLTKVSDIHFEIFETNAQIRFRIDGKLKRVIMFSMETHSILISQIKILSKLNIVE KRLPQDGSFSKIIEKYQIDFRVSILPNIYGEKAVIRILDRNNTKFDLESLGFESDQLIAI KRILKSNAGIILNCGPTGSGKTTTLYSFLQYKNKEETNIVTIEDPVEYHLEGITQIACRE EIGLNFSVILKSLLRQDPDIIMIGEIRDRETAALAIKAALTGHLVFSTIHAKNSTQCIDR LCDLGISPFLISNSLLMILSQRLFRKNCIYCRNKNEDSVKLSSLLAYNSNKEIKSYSSVG CSHCNYKGYLGRIGVYELFIVDDYNRNWILCRDTKKELKPHMISLDENVLNKIKSGIISL EEVIGEI >gi|224531366|gb|GG658186.1| GENE 4 2653 - 3774 549 373 aa, chain + ## HITS:1 COG:PA4527 KEGG:ns NR:ns ## COG: PA4527 COG1459 # Protein_GI_number: 15599723 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Pseudomonas aeruginosa # 41 373 39 373 374 129 22.0 8e-30 MIVNTEKDVYKCLNVRKNKKMVIFSREINFSFYRKKYLLPFVKEFLFLLRNGIAYLEAFT IMKTYENNIFKKKILEDIIDSVQQGNKIVDSFSINSEFFGKFFLKVLFIGEESGNMESAL ELLISELEEYKKLKKQIFSLLFYPCFLICFSTFILIFLFSFIFPKLLSLFQDTGIPLPLI TRILLQIKYIFPFLGLIVILCFIGIYLIFIKKYHKELQHKIDRFLFNKYYCSGLFAEMLR LRMSKYLELLLKTGFSFQETFSILEKEIENLEFCKRFLSMKKKIYKGEKVHIAFRELGCF SEKDLYFIALGEEGGNIEEIFQKIAMYTQEQLHFKIQKYLLWLEPSIFIIFGLCIGIVII AVYLPMFSLSNIL >gi|224531366|gb|GG658186.1| GENE 5 3784 - 4257 567 157 aa, chain + ## HITS:1 COG:FN2093 KEGG:ns NR:ns ## COG: FN2093 COG2165 # Protein_GI_number: 19705383 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Fusobacterium nucleatum # 8 157 1 151 151 129 45.0 3e-30 MKNKGFTLIEIVIAVAIVAVLSTLVTPQVRNQLAKGKDTKAIATLSSLRIASQMYQMEHT EKLIEPDDYDSDEKVKEAFQKLSEYLDPNAKKILKDAKIEIGGSKNSKDAGIQYGGELFF TFKNPDEKGKSDGIYLWFKLPENIGQFDSRGVEWKSY >gi|224531366|gb|GG658186.1| GENE 6 4242 - 4688 272 148 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257453312|ref|ZP_05618611.1| ## NR: gi|257453312|ref|ZP_05618611.1| integral membrane protein [Fusobacterium sp. 3_1_5R] integral membrane protein [Fusobacterium gonidiaformans ATCC 25563] integral membrane protein [Fusobacterium gonidiaformans ATCC 25563] integral membrane protein [Fusobacterium sp. 3_1_5R] integral membrane protein [Fusobacterium sp. 3_1_5R] integral membrane protein [Fusobacterium gonidiaformans ATCC 25563] # 1 148 1 148 148 234 100.0 2e-60 MEKLLIFCIIGNIFYLCIEDIRTKEVPNLGNLFLLCCSLIYSRINGNSWDTILISISLYS FPLIFLYGYVSDFVQKEVLGFGDIKFVMSVGAIMASTYHLWISIYYFYMISFVLASMIGV YILYSKKTKELAMLPYFSLSLCILKVYL >gi|224531366|gb|GG658186.1| GENE 7 4778 - 5071 321 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315918567|ref|ZP_07914807.1| ## NR: gi|315918567|ref|ZP_07914807.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 97 39 135 135 164 100.0 2e-39 MLSFLWLREKQYDKKWEQRNAIISFQAKIQKERMEEGDFYYNNAKWSLDNMNSKFLLKVS KEHLRNGDKEEDIYYFQMFDIESSKKIWEGWSIVIPK >gi|224531366|gb|GG658186.1| GENE 8 4974 - 5624 385 216 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315918568|ref|ZP_07914808.1| ## NR: gi|315918568|ref|ZP_07914808.1| predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 216 1 216 216 382 100.0 1e-105 MEIRRRIFTIFKCLISKVQKRFGKGGVLLYQNNKETAFSSLEIAIAFSIFLIFLSFFFPS IFLFCGSYEKIREISKISQEEQNLERLLEHLLAHKISYLSPDLPSCFVLDTEGKTLIDAN IQSLKSWKMEEGDTLMIQCIFQDDKNQYLEKTFVLRFFRSHLYLEQYRNGYFITGDRIDM LSNVRGYFSIKDSILKICYIRKNRDKTYENNFYISS >gi|224531366|gb|GG658186.1| GENE 9 5596 - 6117 537 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257453315|ref|ZP_05618614.1| ## NR: gi|257453315|ref|ZP_05618614.1| hypothetical protein F3_09655 [Fusobacterium sp. 3_1_5R] hypothetical protein FgonA2_08378 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 173 1 173 173 269 100.0 7e-71 MKTIFIFHHKKRGFIFLPILFFISFFMGMMLIEFQEIYSLFSVHILEKQSEEKKISQETL TNIVNYEKAKIEKYLSEYPDKKLYHYLTETEDQISLLVKTNSPISIGGYHLENEIPQKII YDTWKGYFVKYYELIERKQKYKIRFMVEYRYGKNKKVSEFISYKIIEMEVYLL >gi|224531366|gb|GG658186.1| GENE 10 6114 - 7241 684 375 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257453316|ref|ZP_05618615.1| ## NR: gi|257453316|ref|ZP_05618615.1| hypothetical protein F3_09660 [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] predicted protein [Fusobacterium sp. 3_1_5R] # 1 365 1 365 375 585 99.0 1e-165 MKYSVYTWKEICSQQNIAKNSILLLDSKFFKIIVLTIPPSIDEEDRKETVYEKLSQDYFL DTKEISYIYECVLEENAQTETVFCCYLKEDISFLSNLSFNILFVIPSFLLGTAISKVKKY YLLNFQEKEVYIFLYENQKMSSVQMIQLHSEEQSMINQCLQLQMEKLPVILIGDYTEKQR EILSQYFSIYDLNRLQIRKIAQKIDIFHHSRFSRKKKYIKYLSYLYLLGSCMIICLGFYW QYQIESLRTELVSLEKKISHVGYQMNLLEEEILKVREEQEKREQELEEQKQKFYQIHKML WKIYEISKWKEIICIESLEDRTLKLKLQFPSQKSYLYFMSQLLRKNFKFLNHDRIERIHN KYEVDIEIEEAENEE >gi|224531366|gb|GG658186.1| GENE 11 7231 - 7824 338 197 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467447|ref|ZP_05631758.1| ## NR: gi|257467447|ref|ZP_05631758.1| hypothetical protein FgonA2_08388 [Fusobacterium gonidiaformans ATCC 25563] # 1 197 1 197 197 333 100.0 3e-90 MKNKKEIHGIIVIGISVMIVYFFTWKNFQEYRGKYNQKQEFLQKLMLQEKHYQELKRQLN IMKMSFSPKIAEGENREMFSHLLEFELLLQRVLEKHHLQLQGLGRIQKEGNRLFISSKIQ GKIYNLLMLIQELEQDSRRVSFSEEYWKLERSHNQTAILDCNFVIYVKEGEYDFEVITRN NKKNRVPFVHLAKKTLY >gi|224531366|gb|GG658186.1| GENE 12 7751 - 9052 1150 433 aa, chain + ## HITS:1 COG:FN2086 KEGG:ns NR:ns ## COG: FN2086 COG1450 # Protein_GI_number: 19705376 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Fusobacterium nucleatum # 83 433 60 402 402 237 39.0 4e-62 MKLLQGITKRTGYLLYIWQKRHSISFYILFALICLFTLEEVCYAKELPKDIEMSDTTLRE ALDELEGCLGIKITVDESPKDPLNLFFQEGQSIEEVLDMLGEITNKKVKKISNHEFLLEE VQIQKEEISKEYHLHYLRSKEIYDALKDLFPDIKIANLDSRNQVIVVAEEKKIHEIDKLM EHMDIEGKQVKVHSQILDISKDLFHELGFDWLYEKPSQQKNKFSVAVLGEESVGNSGPVL GSKWNLIRQFSNATEALGLSLKLLEARQDLKITSSPSILIAHGNKGEFKITEEVIVGEKK EKKKGESTSVEPIFKEAGLILKVIPYIHQDNSVTLDISLELSDFRYRQTNQKKDWNFNAQ GGSKMGRSLSTRIHVKNKETILIGGLSRSTHRNTENRVPFLSDIPGLGYLFKSESKKDAE TDMYIKIFIEVCE >gi|224531366|gb|GG658186.1| GENE 13 9081 - 9659 607 192 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257467449|ref|ZP_05631760.1| ## NR: gi|257467449|ref|ZP_05631760.1| hypothetical protein FgonA2_08398 [Fusobacterium gonidiaformans ATCC 25563] # 1 192 1 192 192 325 100.0 2e-87 MGDFNKEILFAPGGKVFIGSNSEENRILKECSMYQIVKEVLPQVYYRLPKRRKEIYEEEI LKIARYYMKVQYNINSLFPKGETAAYILQYSTRKLTEFDFYAPTYKNRNFQVGKYKLTFY RKDKNSPLFQMGERAKLVELFRYIGPYSFKYDVRKQLKEIIKKYRFENLKADFDVPKWME KEFDKIKKIQEI >gi|224531366|gb|GG658186.1| GENE 14 9706 - 10155 276 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 9 147 15 153 165 110 38 3e-24 MDFQELKLKQYASLIEDEKDEIAILSNTSAFLYEILEDVNWVGFYFVKGDELVLGPFQGK TACYRIPFSRGVCGWVARNEKPIIVPNVHEFEGHIACDASSNSEIVLPIFKDGKLYAVLD IDSAEFDNFCILEQVFLGEIIEILEKKWK Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:02 2011 Seq name: gi|224531365|gb|GG658187.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.9, whole genome shotgun sequence Length of sequence - 4000 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 75 - 1545 97.0 # AJ295750 [D:1..1472] # 16S ribosomal RNA # Fusobacterium equinum # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. + LSU_RRNA 2310 - 4000 97.0 # FJ410389 [D:301..3086] # 23S ribosomal RNA # Fusobacterium necrophorum # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:03 2011 Seq name: gi|224531364|gb|GG658188.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.10, whole genome shotgun sequence Length of sequence - 1560 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 91 64 ## 2 2 Tu 1 . - CDS 119 - 1294 724 ## COG3547 Transposase and inactivated derivatives - Prom 1477 - 1536 9.8 Predicted protein(s) >gi|224531364|gb|GG658188.1| GENE 1 2 - 91 64 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no RRPTMKSQELFLKFKIRIFGITKLEFENS >gi|224531364|gb|GG658188.1| GENE 2 119 - 1294 724 391 aa, chain - ## HITS:1 COG:FN1357 KEGG:ns NR:ns ## COG: FN1357 COG3547 # Protein_GI_number: 19704692 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 391 1 391 391 621 85.0 1e-178 MFLLGIDIAKLNHVASCIDSSTNEVVFSNFKFKNDFEGFSAFLDKMKSFDAKNLMIGLES TSHYGENLIHFLFQHGFKVVLMNPLQTSHLRKANIRDAKNDNLDSIHIAKSLLFTKLNFI SEKNMDCFSLKKLTRFRSNLMKQRSKAKIQLTSLLDFIFPELQYLFSSKIHSKAIYALLK KYPSTEEIAALKEDEISSLLYASSKGHFKKEKSLELKSLAKTSVGMKDSSISFHVIQLIE LIELYEKQIKDMESKIADIIHKLDSKLLSVPGISLVACAIILGETNNIDRFSTSKKLLAF AGLDPKIRQSGNFNASSCRMSKKGSPYLRYALIFTAWNCVRHSRKFNEYYLLKRSQGKSH YNALGHVAHKLVRVIFTLIKKDILYQEEELD Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:08 2011 Seq name: gi|224531363|gb|GG658189.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.11, whole genome shotgun sequence Length of sequence - 1427 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 23/0.000 - CDS 17 - 628 469 ## COG2801 Transposase and inactivated derivatives - Prom 784 - 843 4.6 2 1 Op 2 . - CDS 871 - 1380 360 ## COG2963 Transposase and inactivated derivatives Predicted protein(s) >gi|224531363|gb|GG658189.1| GENE 1 17 - 628 469 203 aa, chain - ## HITS:1 COG:FN0486 KEGG:ns NR:ns ## COG: FN0486 COG2801 # Protein_GI_number: 19703821 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 203 1 203 203 344 97.0 7e-95 MKKFNLQSIIRKKRKYSSYKGQVGKIADNHIKRDFEATAPNQKWFTDVTEFNLRGEKLYL SPILDAYGRYIVSYDISRSPNLEQINHMLNLALKENENYENLIFHSDQGWQYQHYSYQKR LKEKKITQSMSRKGNSLDNGLMECFFGLLKSEMFYEQEEKYKTLEELKEAIENYIYYYNN KRIKEKLKGLTPASYRSQSLLVS >gi|224531363|gb|GG658189.1| GENE 2 871 - 1380 360 169 aa, chain - ## HITS:1 COG:FN1887 KEGG:ns NR:ns ## COG: FN1887 COG2963 # Protein_GI_number: 19705192 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 169 1 169 169 199 82.0 2e-51 MSKLTREDKIEIYERRLKGETISSLAKSFNIHESNIKYLIALIGKYGNNILRKSKNRAYS KEFKLQAINRILINHESINSVAIDIGLISAGVLHNWLSKFKENGYNVVEKKKGRKPKSMT KTKNNDKELSEKEKIKKLEDEIIYLKAENEYLKKLRALVQERELKKKKK Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:08 2011 Seq name: gi|224531362|gb|GG658190.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.12, whole genome shotgun sequence Length of sequence - 1286 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 122 - 694 347 ## gi|257467456|ref|ZP_05631767.1| hypothetical protein FgonA2_08435 2 1 Op 2 . - CDS 695 - 1285 473 ## gi|257467457|ref|ZP_05631768.1| hypothetical protein FgonA2_08440 Predicted protein(s) >gi|224531362|gb|GG658190.1| GENE 1 122 - 694 347 190 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467456|ref|ZP_05631767.1| ## NR: gi|257467456|ref|ZP_05631767.1| hypothetical protein FgonA2_08435 [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] predicted protein [Fusobacterium gonidiaformans ATCC 25563] # 1 190 1 190 190 293 100.0 6e-78 MDNVKITISQEKIYIKKGNFRIQQIYKYTLFYLVMEVIIIILFLKVEKGTLGNKYLLQLL NDSFLLFLMKVSFFSLPLFLLLFLSCRNLYLEEINCSDRIKINGINYKIDIEYNFLKEVK VALSYRFNYSLFDRGSYYSHFRDKCTIIFITQNDEEYEWGFKLSYQKGMEIKKMIEERMA LNLSKKNENV >gi|224531362|gb|GG658190.1| GENE 2 695 - 1285 473 196 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257467457|ref|ZP_05631768.1| ## NR: gi|257467457|ref|ZP_05631768.1| hypothetical protein FgonA2_08440 [Fusobacterium gonidiaformans ATCC 25563] # 1 196 1 196 196 353 100.0 4e-96 NLSSKPVSEATWKNLVNTSSVITGPGADVIANRIPVGEREYYSTEIFTSETYSFGGRVSR TQSAFTLVNDKSKTLTTYNIGSTSVGFGLLDIGGSVGVGLYLDDTVEDLSKLTTSIGVSK VFGIVSLGTDLLFKKGSKIPRGIRFYIGKGLPSPVPIEVHTTVIEIGSPKNIKSDKRAYN VFDKFTKESRQRGGEW Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:28 2011 Seq name: gi|224531361|gb|GG658191.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.13, whole genome shotgun sequence Length of sequence - 1215 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 130 - 1215 98.0 # FJ410389 [D:301..3086] # 23S ribosomal RNA # Fusobacterium necrophorum # Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium. Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:29 2011 Seq name: gi|224531360|gb|GG658192.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.14, whole genome shotgun sequence Length of sequence - 1159 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 15 - 74 6.8 1 1 Tu 1 . + CDS 105 - 1133 495 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase Predicted protein(s) >gi|224531360|gb|GG658192.1| GENE 1 105 - 1133 495 342 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 3 334 2 315 317 195 38 2e-50 MAQQQYTTKRRKGQHLTLIERGKIEAFLKINIPKIQIASEIGISIRTLYREINRGMVRGL LNSDYSTYDAYSAEFAHKKYLEAMKSKEGTLKIGKNRKLIEYVENSMLNDKNSPYVALEK AKKENIEVNICLKTLYNYIHKQLFINFSEEDMIYKKDRRKQEKIPKRIRKIGGRSIEERP EEINNRQEVGHFEADTVVGKRGTKEAILVLTDRKTRLEMVRKIPDKTAESVIKELSKIII EYPGVIKSITSDNGSEFMRADKIEEENIAYYYAHSYSSWERGSNENNNKLIRRFIPKGTD ISEVSEEEIKEIEKWMNDYPRKLFNGKSANEMYLSEFTKYFS Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:29 2011 Seq name: gi|224531359|gb|GG658193.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.15, whole genome shotgun sequence Length of sequence - 945 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 192 - 941 436 ## COG3464 Transposase and inactivated derivatives Predicted protein(s) >gi|224531359|gb|GG658193.1| GENE 1 192 - 941 436 249 aa, chain - ## HITS:1 COG:FN0599 KEGG:ns NR:ns ## COG: FN0599 COG3464 # Protein_GI_number: 19703934 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 246 181 427 428 218 49.0 6e-57 MSFLFMDGSSHKILDIVENRKLHALEDYFSRFSYQVRAQVKYIVMDMYSPYIQLTKRYFA KANIVLDPFHIVQLVNRAFNQTRIREMNQEKTKNSKLYRILKRDWKLYLKDFLTLSETRK YCRSLKQFISPSEKVDYVMAKKENLRQDYYFYQDILYAIKRKDFRLFESYLERWKKKISP KMQTAWKTLRKYRKYIRNTLGTSYSNGPLEGMNNFIKSVKRVAFGFHRFSHFRQRILIMQ GIAQINPNF Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:30 2011 Seq name: gi|224531358|gb|GG658194.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.16, whole genome shotgun sequence Length of sequence - 943 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.000 - CDS 190 - 525 166 ## COG3464 Transposase and inactivated derivatives - Prom 551 - 610 1.9 2 1 Op 2 . - CDS 625 - 939 306 ## COG3464 Transposase and inactivated derivatives Predicted protein(s) >gi|224531358|gb|GG658194.1| GENE 1 190 - 525 166 111 aa, chain - ## HITS:1 COG:FN0599 KEGG:ns NR:ns ## COG: FN0599 COG3464 # Protein_GI_number: 19703934 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 108 317 427 428 90 42.0 1e-18 MAKKENLRQDYYFYQDILYAVKRKDFRLFESYLERWKKKIIPKMQTAWKTLRKYRKYIRN TLGTSYSNGPLEGMNNFIKSVKRVAFGFRRFSHFRQRILIMRGIAQINPNF >gi|224531358|gb|GG658194.1| GENE 2 625 - 939 306 104 aa, chain - ## HITS:1 COG:FN0599 KEGG:ns NR:ns ## COG: FN0599 COG3464 # Protein_GI_number: 19703934 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 88 181 268 428 112 65.0 1e-25 MSFLFMDGSSHKILDIFENRKLHALEDYFSRFSYQVRSQVKYIVMDMYSPYIQLAKRYFP KAKIVLDPFHIVQLVNRAFNQTRIREMNQEKTKNPKLYRILKRD Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:31 2011 Seq name: gi|224531357|gb|GG658195.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.17, whole genome shotgun sequence Length of sequence - 699 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 698 859 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|224531357|gb|GG658195.1| GENE 1 3 - 698 859 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 2 232 1 244 407 335 69 5e-93 KMAKEKYERSKPHVNIGTIGHVDHGKTTTTAAISKVLSDLGLAQKVDFDKIDVAPEERER GITINTAHIEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREH ILLSRQVGVPYIVVYLNKADMVEDEELLELVEMEVRELLSEYGFPGDEIPIITGSSLGAL NGEQKWIDQIMALMKAVDEYIPTPERAVDQPFLMPIEDVFTITGRGTVVTGR Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:31 2011 Seq name: gi|224531356|gb|GG658196.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.18, whole genome shotgun sequence Length of sequence - 683 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 583 391 ## COG0732 Restriction endonuclease S subunits - Prom 607 - 666 2.1 Predicted protein(s) >gi|224531356|gb|GG658196.1| GENE 1 1 - 583 391 194 aa, chain - ## HITS:1 COG:jhp1422 KEGG:ns NR:ns ## COG: jhp1422 COG0732 # Protein_GI_number: 15612487 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Helicobacter pylori J99 # 2 151 17 167 624 97 34.0 1e-20 MLKTGELPLVVTDYVANGSFASLKANVTLYQEPNYAYFVRNTDLKSGTFEVFVDEHSYNF LSKSVLYGGEIIISNVGDVGRVFLCPKLNKPMTLGNNIILLRPEQDNLQYYLYIWFKWLY GQSLIQGIKGGSAQPKFNKTDFKNLPIYLPPDDLLQRFHQSVQPMFELIAENIVENQRLS ALRNTLLPKLMNGE Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:32 2011 Seq name: gi|224531355|gb|GG658197.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.19, whole genome shotgun sequence Length of sequence - 652 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 83 - 601 558 ## COG4283 Uncharacterized conserved protein Predicted protein(s) >gi|224531355|gb|GG658197.1| GENE 1 83 - 601 558 172 aa, chain + ## HITS:1 COG:SP0939 KEGG:ns NR:ns ## COG: SP0939 COG4283 # Protein_GI_number: 15900819 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 172 1 172 172 257 82.0 8e-69 MKIYKDKEELKSEINKSFEKYISEFDIIPESLKDKRVPEVDRTPAENLAYQLGWTTLVLK WEKDEKNGFEVKTPSDMFKWNQLGELYQWFTDTYAHLSIEELKKRLKENIISIYTMIDTL SEEELFQPHMRKWADEATKTATWEVYKFIHVNTVAPFGTFRTKIRKWKKIVL Prediction of potential genes in microbial genomes Time: Sat Jul 9 17:18:33 2011 Seq name: gi|224531354|gb|GG658198.1| Fusobacterium gonidiaformans ATCC 25563 genomic scaffold supercont1.20, whole genome shotgun sequence Length of sequence - 616 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 616 157 ## SL003B_3750 Restriction modification system DNA specificity domain protein Predicted protein(s) >gi|224531354|gb|GG658198.1| GENE 1 1 - 616 157 205 aa, chain - ## HITS:1 COG:no KEGG:SL003B_3750 NR:ns ## KEGG: SL003B_3750 # Name: not_defined # Def: Restriction modification system DNA specificity domain protein # Organism: P.gilvum # Pathway: not_defined # 29 205 114 288 298 90 32.0 5e-17 EAQAIFKSWFVDFEPFYGKKPLAWKATTLGNVTTNIRKNIGDKVYPVFSAVNSGNLIFSD DYFTKQVYSKKLNKYIEVDTWNFAYNPARINIGSIGINEHNIIGCVSPVYVVFSVQKEYH SFFRFYFKQNFFNLHCKTKASGSVRQTLSYKDFSLIDVVYPNNEYALKFDTLWKSFYQKI LRLKAENKYLSELRDSLLPKLMSGE